Query         psy6203
Match_columns 568
No_of_seqs    846 out of 5038
Neff          9.1 
Searched_HMMs 46136
Date          Fri Aug 16 20:22:00 2013
Command       hhsearch -i /work/01045/syshi/Psyhhblits/psy6203.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6203hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0615|consensus              100.0 8.4E-62 1.8E-66  471.0  19.0  260    5-266   169-444 (475)
  2 KOG0588|consensus              100.0 5.3E-59 1.2E-63  474.6  27.5  323    2-326     6-340 (786)
  3 KOG0575|consensus              100.0   9E-59   2E-63  471.8  25.3  257    8-266    18-276 (592)
  4 KOG0598|consensus              100.0 1.3E-56 2.8E-61  432.4  21.6  256    7-264    24-286 (357)
  5 KOG0581|consensus              100.0 9.8E-56 2.1E-60  426.3  22.3  252    9-264    80-340 (364)
  6 KOG0583|consensus              100.0 3.3E-55 7.2E-60  447.9  26.8  259    5-264    14-280 (370)
  7 KOG4717|consensus              100.0 2.6E-55 5.6E-60  434.2  21.0  320    5-326    15-340 (864)
  8 KOG0616|consensus              100.0 2.2E-55 4.7E-60  409.7  18.1  252    8-264    44-302 (355)
  9 KOG0592|consensus              100.0 3.7E-55 8.1E-60  438.1  20.1  256    8-264    73-343 (604)
 10 KOG0595|consensus              100.0 1.6E-54 3.5E-59  421.1  22.3  260    4-266     6-275 (429)
 11 KOG0611|consensus              100.0 2.6E-54 5.6E-59  416.4  14.8  258    5-265    50-309 (668)
 12 KOG0593|consensus              100.0 1.1E-53 2.4E-58  398.9  14.0  255    8-263     2-288 (396)
 13 KOG0605|consensus              100.0 1.7E-52 3.7E-57  419.5  22.6  258    7-266   140-452 (550)
 14 KOG0033|consensus              100.0 1.5E-54 3.3E-59  393.2   6.8  257    5-264     8-272 (355)
 15 KOG0586|consensus              100.0 1.4E-51 3.1E-56  419.6  23.4  317    6-325    54-371 (596)
 16 KOG0600|consensus              100.0 1.7E-51 3.6E-56  408.8  23.1  263    7-270   116-411 (560)
 17 KOG0585|consensus              100.0 6.9E-52 1.5E-56  408.0  19.5  258    7-264    96-377 (576)
 18 KOG0591|consensus              100.0 2.3E-53 4.9E-58  393.0   7.5  244    8-253    19-275 (375)
 19 KOG0597|consensus              100.0 2.7E-52 5.8E-57  417.6  14.9  254    8-264     2-256 (808)
 20 KOG0659|consensus              100.0 4.3E-51 9.2E-56  375.6  20.3  260    8-269     2-291 (318)
 21 KOG0661|consensus              100.0 7.7E-52 1.7E-56  408.3  13.0  260    4-266     6-298 (538)
 22 KOG0580|consensus              100.0 1.1E-51 2.3E-56  374.4  12.1  252    8-263    22-277 (281)
 23 KOG0694|consensus              100.0 1.2E-50 2.6E-55  417.0  21.1  255    8-265   368-630 (694)
 24 KOG0198|consensus              100.0 1.2E-50 2.6E-55  398.2  20.2  258    7-265    16-282 (313)
 25 KOG0663|consensus              100.0 2.3E-50   5E-55  381.5  19.3  270    7-278    75-380 (419)
 26 KOG0660|consensus              100.0 4.4E-50 9.4E-55  385.6  20.5  259    5-264    19-315 (359)
 27 KOG0032|consensus              100.0 2.9E-49 6.4E-54  403.7  26.7  258    4-265    31-299 (382)
 28 KOG0603|consensus              100.0 4.4E-51 9.5E-56  418.2  13.1  458   15-491     1-566 (612)
 29 KOG0582|consensus              100.0 2.6E-49 5.6E-54  387.6  24.2  263    3-265    21-299 (516)
 30 KOG0578|consensus              100.0 7.4E-50 1.6E-54  403.6  19.2  257    4-264   269-528 (550)
 31 PTZ00263 protein kinase A cata 100.0 7.9E-49 1.7E-53  401.0  26.7  252    8-264    18-276 (329)
 32 KOG0599|consensus              100.0 1.7E-50 3.8E-55  372.1  11.9  257    5-263    14-287 (411)
 33 cd05612 STKc_PRKX_like Catalyt 100.0 5.2E-49 1.1E-53  395.5  22.5  252    8-264     1-259 (291)
 34 cd05571 STKc_PKB Catalytic dom 100.0 2.4E-48 5.2E-53  396.5  25.1  249   14-264     1-256 (323)
 35 PTZ00426 cAMP-dependent protei 100.0 1.1E-47 2.4E-52  393.8  25.6  252    8-264    30-289 (340)
 36 cd05585 STKc_YPK1_like Catalyt 100.0 1.6E-47 3.6E-52  388.5  25.7  247   16-264     1-252 (312)
 37 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.7E-47 3.7E-52  383.9  25.4  253    8-262     5-288 (288)
 38 cd05593 STKc_PKB_gamma Catalyt 100.0 3.2E-47   7E-52  388.9  26.0  249   14-264     1-256 (328)
 39 cd07848 STKc_CDKL5 Catalytic d 100.0 3.3E-47 7.1E-52  381.5  25.3  254    8-262     1-287 (287)
 40 cd05614 STKc_MSK2_N N-terminal 100.0 7.4E-47 1.6E-51  387.2  27.0  256    9-264     1-272 (332)
 41 cd05628 STKc_NDR1 Catalytic do 100.0 5.9E-47 1.3E-51  392.6  26.4  255    8-264     1-298 (363)
 42 KOG0604|consensus              100.0 2.2E-48 4.7E-53  362.8  14.0  251    6-265    59-328 (400)
 43 cd05595 STKc_PKB_beta Catalyti 100.0 3.9E-47 8.5E-52  387.5  24.5  249   14-264     1-256 (323)
 44 cd05590 STKc_nPKC_eta Catalyti 100.0 5.7E-47 1.2E-51  385.8  25.0  249   14-264     1-258 (320)
 45 cd05599 STKc_NDR_like Catalyti 100.0 7.3E-47 1.6E-51  392.2  26.2  255    8-264     1-301 (364)
 46 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 9.1E-47   2E-51  386.6  26.4  252    8-264     1-262 (333)
 47 KOG0594|consensus              100.0 3.1E-47 6.7E-52  367.4  21.3  257    8-266    11-309 (323)
 48 cd07869 STKc_PFTAIRE1 Catalyti 100.0 6.3E-47 1.4E-51  382.6  24.7  256    7-264     4-293 (303)
 49 KOG0610|consensus              100.0 2.5E-47 5.5E-52  370.9  20.3  258    8-266    77-399 (459)
 50 KOG0201|consensus              100.0 3.7E-49 8.1E-54  386.5   7.6  260    3-264     8-268 (467)
 51 cd05587 STKc_cPKC Catalytic do 100.0 1.3E-46 2.7E-51  384.0  26.5  254    9-264     1-262 (324)
 52 cd05591 STKc_nPKC_epsilon Cata 100.0 1.1E-46 2.4E-51  383.9  25.6  249   14-264     1-259 (321)
 53 cd05631 STKc_GRK4 Catalytic do 100.0 1.4E-46   3E-51  376.7  25.4  253    9-264     1-266 (285)
 54 cd05596 STKc_ROCK Catalytic do 100.0 1.8E-46   4E-51  389.4  26.9  256    8-264    43-309 (370)
 55 cd05594 STKc_PKB_alpha Catalyt 100.0 7.4E-47 1.6E-51  385.9  23.5  249   14-264     1-257 (325)
 56 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.1E-46 2.4E-51  388.7  24.9  255    8-264     1-290 (350)
 57 cd05620 STKc_nPKC_delta Cataly 100.0 1.4E-46 3.1E-51  382.2  25.1  249   14-264     1-253 (316)
 58 cd05584 STKc_p70S6K Catalytic  100.0 2.3E-46   5E-51  381.9  26.4  250   13-264     1-261 (323)
 59 cd05589 STKc_PKN Catalytic dom 100.0   2E-46 4.3E-51  382.6  25.8  252   10-264     1-262 (324)
 60 cd05625 STKc_LATS1 Catalytic d 100.0 2.5E-46 5.3E-51  390.7  27.0  255    8-264     1-310 (382)
 61 cd05629 STKc_NDR_like_fungal C 100.0 1.8E-46   4E-51  391.0  26.0  255    8-264     1-310 (377)
 62 cd05626 STKc_LATS2 Catalytic d 100.0 4.2E-46 9.1E-51  388.6  28.1  256    8-264     1-310 (381)
 63 cd05601 STKc_CRIK Catalytic do 100.0 1.2E-46 2.7E-51  385.2  23.6  256    8-264     1-268 (330)
 64 cd05598 STKc_LATS Catalytic do 100.0   2E-46 4.3E-51  390.6  25.2  255    8-264     1-306 (376)
 65 cd05621 STKc_ROCK2 Catalytic d 100.0 4.5E-46 9.7E-51  386.1  27.1  258    6-264    41-309 (370)
 66 cd05616 STKc_cPKC_beta Catalyt 100.0   4E-46 8.7E-51  380.2  26.3  254    9-264     1-262 (323)
 67 cd05588 STKc_aPKC Catalytic do 100.0 3.7E-46 7.9E-51  381.3  25.9  249   14-264     1-267 (329)
 68 cd05592 STKc_nPKC_theta_delta  100.0 3.3E-46 7.1E-51  379.5  25.3  249   14-264     1-253 (316)
 69 cd05575 STKc_SGK Catalytic dom 100.0   4E-46 8.7E-51  380.2  25.0  249   14-264     1-256 (323)
 70 cd05619 STKc_nPKC_theta Cataly 100.0 5.5E-46 1.2E-50  377.8  24.8  249   14-264     1-253 (316)
 71 cd05570 STKc_PKC Catalytic dom 100.0 4.9E-46 1.1E-50  378.6  24.5  249   14-264     1-257 (318)
 72 KOG0589|consensus              100.0 7.3E-47 1.6E-51  380.3  17.1  255    7-263     3-262 (426)
 73 cd05627 STKc_NDR2 Catalytic do 100.0 7.3E-46 1.6E-50  384.0  25.0  255    8-264     1-298 (360)
 74 cd06649 PKc_MEK2 Catalytic dom 100.0 1.2E-45 2.6E-50  378.0  26.2  254    7-264     4-306 (331)
 75 cd05618 STKc_aPKC_iota Catalyt 100.0 1.4E-45 3.1E-50  376.9  26.7  249   14-264     1-267 (329)
 76 cd05582 STKc_RSK_N N-terminal  100.0 4.2E-46 9.1E-51  379.2  22.6  250   13-264     1-259 (318)
 77 cd05615 STKc_cPKC_alpha Cataly 100.0 1.6E-45 3.5E-50  375.6  26.3  254    9-264     1-262 (323)
 78 KOG0607|consensus              100.0 7.8E-47 1.7E-51  354.9  14.8  257    8-265    77-367 (463)
 79 KOG0690|consensus              100.0 2.4E-47 5.1E-52  359.0  11.0  255    8-264   168-429 (516)
 80 cd05622 STKc_ROCK1 Catalytic d 100.0 2.5E-45 5.5E-50  380.8  27.4  257    7-264    42-309 (371)
 81 PHA03212 serine/threonine kina 100.0   2E-45 4.3E-50  383.5  26.5  251    7-266    91-383 (391)
 82 cd07859 STKc_TDY_MAPK_plant Ca 100.0   3E-45 6.4E-50  376.1  26.8  256    9-265     1-296 (338)
 83 cd05597 STKc_DMPK_like Catalyt 100.0 4.7E-45   1E-49  373.5  27.7  257    8-264     1-271 (331)
 84 cd05604 STKc_SGK3 Catalytic do 100.0 1.5E-45 3.2E-50  376.4  23.4  249   14-264     1-256 (325)
 85 cd05602 STKc_SGK1 Catalytic do 100.0 2.3E-45 4.9E-50  375.0  24.3  248   14-263     1-255 (325)
 86 KOG0658|consensus              100.0   5E-46 1.1E-50  358.2  18.1  248    9-264    25-311 (364)
 87 cd05603 STKc_SGK2 Catalytic do 100.0 2.8E-45 6.1E-50  373.7  24.6  249   14-264     1-256 (321)
 88 KOG0192|consensus              100.0 2.3E-45   5E-50  371.9  23.6  247    9-258    42-298 (362)
 89 cd05586 STKc_Sck1_like Catalyt 100.0 1.2E-45 2.5E-50  378.0  21.6  248   16-264     1-258 (330)
 90 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.1E-45 8.9E-50  370.4  25.2  255    8-264     6-291 (309)
 91 cd07853 STKc_NLK Catalytic dom 100.0 1.9E-45 4.1E-50  382.6  22.6  256    9-265     1-294 (372)
 92 cd05617 STKc_aPKC_zeta Catalyt 100.0 6.8E-45 1.5E-49  371.7  25.6  249   14-264     1-265 (327)
 93 KOG0667|consensus              100.0 2.7E-45 5.8E-50  377.6  22.4  252    5-264   183-507 (586)
 94 cd05608 STKc_GRK1 Catalytic do 100.0 4.4E-45 9.5E-50  364.9  23.0  247   16-264     1-262 (280)
 95 cd05605 STKc_GRK4_like Catalyt 100.0   1E-44 2.2E-49  363.2  25.7  253    9-264     1-266 (285)
 96 cd05623 STKc_MRCK_alpha Cataly 100.0 1.4E-44 3.1E-49  370.1  27.3  257    8-264     1-271 (332)
 97 PTZ00036 glycogen synthase kin 100.0 7.2E-45 1.6E-49  385.2  25.2  250    7-264    65-356 (440)
 98 cd05624 STKc_MRCK_beta Catalyt 100.0 1.6E-44 3.5E-49  369.5  26.7  257    8-264     1-271 (331)
 99 cd06650 PKc_MEK1 Catalytic dom 100.0   1E-44 2.2E-49  371.2  24.7  255    6-264     3-304 (333)
100 cd07862 STKc_CDK6 Catalytic do 100.0 1.8E-44 3.9E-49  362.2  25.8  251    8-262     1-290 (290)
101 PLN00034 mitogen-activated pro 100.0 8.5E-45 1.8E-49  375.0  21.8  252    8-264    74-333 (353)
102 cd06625 STKc_MEKK3_like Cataly 100.0 6.1E-44 1.3E-48  352.8  26.4  254    8-262     2-263 (263)
103 cd07873 STKc_PCTAIRE1 Catalyti 100.0 4.1E-44 8.8E-49  361.7  25.3  255    8-264     6-291 (301)
104 cd07876 STKc_JNK2 Catalytic do 100.0 5.9E-44 1.3E-48  369.7  26.7  254    5-264    18-320 (359)
105 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.4E-44 3.1E-49  372.0  21.9  254    5-264    12-303 (343)
106 cd05580 STKc_PKA Catalytic dom 100.0 7.8E-44 1.7E-48  357.7  26.6  252    8-264     1-259 (290)
107 PTZ00283 serine/threonine prot 100.0 4.1E-44 8.8E-49  384.0  25.9  259    5-264    29-302 (496)
108 PTZ00267 NIMA-related protein  100.0   6E-44 1.3E-48  382.3  26.1  255    8-264    67-328 (478)
109 cd07875 STKc_JNK1 Catalytic do 100.0 7.7E-44 1.7E-48  369.5  25.9  254    5-264    21-323 (364)
110 PF00069 Pkinase:  Protein kina 100.0 1.2E-44 2.6E-49  356.9  18.6  252   10-262     1-260 (260)
111 KOG0197|consensus              100.0   2E-44 4.2E-49  363.8  19.8  245    9-257   207-455 (468)
112 cd07863 STKc_CDK4 Catalytic do 100.0 1.3E-43 2.9E-48  355.4  25.8  250    9-262     1-288 (288)
113 cd05610 STKc_MASTL Catalytic d 100.0 1.6E-43 3.5E-48  392.0  28.7  191    7-198     3-195 (669)
114 KOG0612|consensus              100.0 1.7E-45 3.8E-50  394.8  11.9  259    7-266    74-345 (1317)
115 PTZ00284 protein kinase; Provi 100.0 6.1E-44 1.3E-48  382.0  23.4  250    7-264   128-443 (467)
116 cd05630 STKc_GRK6 Catalytic do 100.0 2.1E-43 4.6E-48  353.6  25.2  253    9-264     1-266 (285)
117 cd07874 STKc_JNK3 Catalytic do 100.0 1.4E-43 3.1E-48  366.3  24.4  254    5-264    14-316 (355)
118 cd06615 PKc_MEK Catalytic doma 100.0   3E-43 6.5E-48  356.6  25.5  253    8-264     1-292 (308)
119 cd05607 STKc_GRK7 Catalytic do 100.0   2E-43 4.4E-48  352.3  23.9  246   16-264     1-259 (277)
120 cd05102 PTKc_VEGFR3 Catalytic  100.0 1.3E-43 2.8E-48  364.0  22.3  251    7-258     6-329 (338)
121 cd08223 STKc_Nek4 Catalytic do 100.0 8.2E-43 1.8E-47  343.5  26.9  252    9-262     1-257 (257)
122 KOG0579|consensus              100.0 3.1E-45 6.8E-50  370.0   9.4  262    4-267    28-297 (1187)
123 cd08529 STKc_FA2-like Catalyti 100.0 9.7E-43 2.1E-47  342.6  26.9  252    9-262     1-256 (256)
124 cd07847 STKc_CDKL1_4 Catalytic 100.0 7.3E-43 1.6E-47  349.5  26.3  254    8-262     1-286 (286)
125 cd07861 STKc_CDK1_euk Catalyti 100.0 5.4E-43 1.2E-47  350.4  25.3  252    9-262     1-285 (285)
126 cd07832 STKc_CCRK Catalytic do 100.0 6.3E-43 1.4E-47  349.9  25.8  254    9-263     1-286 (286)
127 cd05632 STKc_GRK5 Catalytic do 100.0 7.9E-43 1.7E-47  349.5  26.2  254    9-265     1-267 (285)
128 cd07868 STKc_CDK8 Catalytic do 100.0 3.4E-43 7.4E-48  357.6  23.9  246   13-262     6-317 (317)
129 cd07839 STKc_CDK5 Catalytic do 100.0 1.7E-43 3.6E-48  354.0  21.2  252    9-262     1-284 (284)
130 cd06610 STKc_OSR1_SPAK Catalyt 100.0 8.5E-43 1.8E-47  345.1  26.0  255    8-262     1-267 (267)
131 cd06645 STKc_MAP4K3 Catalytic  100.0 3.5E-43 7.5E-48  348.4  22.1  253    7-261     8-267 (267)
132 cd06628 STKc_MAPKKK_Byr2_like  100.0 1.3E-42 2.9E-47  344.1  26.0  253    9-262     1-267 (267)
133 PHA03207 serine/threonine kina 100.0 5.5E-43 1.2E-47  366.3  24.4  253    6-266    90-382 (392)
134 cd06609 STKc_MST3_like Catalyt 100.0 6.1E-43 1.3E-47  348.1  23.6  254    8-264     1-256 (274)
135 cd05574 STKc_phototropin_like  100.0 1.5E-42 3.2E-47  352.8  26.8  257    8-265     1-295 (316)
136 cd06611 STKc_SLK_like Catalyti 100.0 3.7E-43   8E-48  350.8  21.9  258    5-264     2-267 (280)
137 cd06654 STKc_PAK1 Catalytic do 100.0 1.5E-42 3.2E-47  349.5  26.2  259    2-264    14-275 (296)
138 cd06619 PKc_MKK5 Catalytic dom 100.0   1E-42 2.2E-47  347.5  24.9  249    8-264     1-258 (279)
139 cd05064 PTKc_EphR_A10 Catalyti 100.0 7.9E-43 1.7E-47  345.9  23.8  251    7-258     4-260 (266)
140 cd07845 STKc_CDK10 Catalytic d 100.0 1.9E-42 4.2E-47  350.8  26.8  262    5-268     4-299 (309)
141 cd06646 STKc_MAP4K5 Catalytic  100.0 7.7E-43 1.7E-47  345.9  23.3  255    5-261     6-267 (267)
142 cd05578 STKc_Yank1 Catalytic d 100.0 8.1E-43 1.7E-47  344.0  23.2  251    9-262     1-258 (258)
143 cd06644 STKc_STK10_LOK Catalyt 100.0 1.6E-42 3.6E-47  348.4  25.9  258    5-264     9-274 (292)
144 cd05609 STKc_MAST Catalytic do 100.0   2E-42 4.4E-47  350.0  26.5  256    8-264     1-278 (305)
145 cd06655 STKc_PAK2 Catalytic do 100.0 3.1E-42 6.8E-47  347.1  27.6  259    3-265    14-275 (296)
146 cd08227 PK_STRAD_alpha Pseudok 100.0 7.4E-43 1.6E-47  356.8  23.0  253   12-264     2-312 (327)
147 PTZ00266 NIMA-related protein  100.0 1.2E-42 2.5E-47  384.3  26.1  257    5-263    10-299 (1021)
148 cd06643 STKc_SLK Catalytic dom 100.0 1.8E-42   4E-47  346.2  25.1  255    8-264     5-267 (282)
149 cd06613 STKc_MAP4K3_like Catal 100.0 3.1E-42 6.8E-47  340.2  26.2  253    7-261     2-262 (262)
150 cd06637 STKc_TNIK Catalytic do 100.0 1.8E-42   4E-47  344.1  24.5  256    4-262     2-272 (272)
151 cd08218 STKc_Nek1 Catalytic do 100.0 3.4E-42 7.4E-47  339.0  25.9  252    9-262     1-256 (256)
152 cd07846 STKc_CDKL2_3 Catalytic 100.0 9.7E-43 2.1E-47  348.7  22.2  254    8-262     1-286 (286)
153 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.1E-42 2.5E-47  348.4  22.8  254    8-264     1-267 (286)
154 cd06656 STKc_PAK3 Catalytic do 100.0 2.1E-42 4.6E-47  348.5  23.9  259    3-265    14-275 (297)
155 KOG0574|consensus              100.0 1.6E-45 3.5E-50  343.3   0.9  253    8-265    33-289 (502)
156 cd07849 STKc_ERK1_2_like Catal 100.0 3.4E-42 7.3E-47  353.3  25.3  260    5-266     2-299 (336)
157 KOG0986|consensus              100.0 7.9E-44 1.7E-48  348.9  12.4  256    7-265   184-452 (591)
158 cd07844 STKc_PCTAIRE_like Cata 100.0 5.1E-42 1.1E-46  344.6  25.9  253    8-262     5-291 (291)
159 KOG0662|consensus              100.0 3.4E-43 7.4E-48  305.3  14.8  255    8-264     2-288 (292)
160 KOG4279|consensus              100.0 1.5E-43 3.3E-48  361.3  14.7  250   14-265   581-838 (1226)
161 cd06651 STKc_MEKK3 Catalytic d 100.0 5.3E-42 1.2E-46  339.8  25.5  254    8-263     2-265 (266)
162 cd08219 STKc_Nek3 Catalytic do 100.0 5.9E-42 1.3E-46  337.2  25.6  249    9-259     1-252 (255)
163 cd08221 STKc_Nek9 Catalytic do 100.0   1E-41 2.2E-46  335.6  27.2  252    9-262     1-256 (256)
164 cd07841 STKc_CDK7 Catalytic do 100.0 3.7E-42 8.1E-47  346.7  24.6  259    9-269     1-292 (298)
165 cd05572 STKc_cGK_PKG Catalytic 100.0 4.6E-42   1E-46  339.3  24.7  245   16-263     1-256 (262)
166 cd06639 STKc_myosinIIIB Cataly 100.0 1.2E-41 2.5E-46  342.0  27.8  257    4-263    18-291 (291)
167 PHA03211 serine/threonine kina 100.0 3.6E-42 7.7E-47  363.6  25.1  248    7-263   168-459 (461)
168 KOG4236|consensus              100.0 1.8E-43   4E-48  351.0  14.2  253    5-263   559-823 (888)
169 cd07860 STKc_CDK2_3 Catalytic  100.0 4.2E-42 9.2E-47  343.8  24.1  252    9-262     1-284 (284)
170 cd06630 STKc_MEKK1 Catalytic d 100.0 3.4E-42 7.4E-47  341.2  23.1  254    9-263     1-268 (268)
171 cd06631 STKc_YSK4 Catalytic do 100.0 6.5E-42 1.4E-46  338.9  25.0  252    9-262     1-265 (265)
172 cd07831 STKc_MOK Catalytic dom 100.0 5.2E-42 1.1E-46  342.6  24.5  249   10-262     1-282 (282)
173 cd07870 STKc_PFTAIRE2 Catalyti 100.0 9.1E-42   2E-46  342.8  26.3  254    7-262     4-291 (291)
174 PHA02988 hypothetical protein; 100.0 5.3E-42 1.2E-46  343.0  24.4  239   14-258    26-274 (283)
175 cd06652 STKc_MEKK2 Catalytic d 100.0 1.2E-41 2.6E-46  337.1  26.6  254    8-263     2-265 (265)
176 cd07836 STKc_Pho85 Catalytic d 100.0   6E-42 1.3E-46  342.6  24.7  252    9-262     1-284 (284)
177 cd06608 STKc_myosinIII_like Ca 100.0 5.9E-42 1.3E-46  340.5  24.3  256    4-262     2-275 (275)
178 cd06629 STKc_MAPKKK_Bck1_like  100.0 9.4E-42   2E-46  339.1  25.7  254    9-262     2-272 (272)
179 cd05633 STKc_GRK3 Catalytic do 100.0 6.2E-42 1.3E-46  341.9  24.5  247   15-264     1-260 (279)
180 cd06638 STKc_myosinIIIA Cataly 100.0 7.7E-42 1.7E-46  342.3  25.2  256    4-262    14-286 (286)
181 cd06917 STKc_NAK1_like Catalyt 100.0 4.9E-42 1.1E-46  342.0  23.7  255    8-264     1-260 (277)
182 cd07833 STKc_CDKL Catalytic do 100.0 6.3E-42 1.4E-46  343.0  24.6  255    8-262     1-288 (288)
183 cd06658 STKc_PAK5 Catalytic do 100.0 1.8E-42 3.9E-47  348.1  20.6  262    2-267    16-280 (292)
184 cd06632 STKc_MEKK1_plant Catal 100.0   1E-41 2.2E-46  335.7  25.3  252    9-262     1-258 (258)
185 cd06640 STKc_MST4 Catalytic do 100.0 3.3E-42 7.2E-47  343.5  22.1  256    6-264     2-258 (277)
186 PHA03209 serine/threonine kina 100.0 3.5E-42 7.5E-47  355.8  23.0  245    8-263    66-355 (357)
187 KOG2345|consensus              100.0 1.5E-43 3.3E-48  322.7  11.2  253    6-259    19-296 (302)
188 cd05106 PTKc_CSF-1R Catalytic  100.0 2.4E-42 5.2E-47  358.9  21.7  250    8-258    38-367 (374)
189 cd05104 PTKc_Kit Catalytic dom 100.0   3E-42 6.6E-47  358.4  22.5  252    7-259    34-370 (375)
190 cd05096 PTKc_DDR1 Catalytic do 100.0 6.3E-42 1.4E-46  346.2  24.0  250    7-257     4-299 (304)
191 cd05606 STKc_beta_ARK Catalyti 100.0 1.1E-41 2.4E-46  339.9  25.4  247   15-264     1-260 (278)
192 cd08220 STKc_Nek8 Catalytic do 100.0   2E-41 4.2E-46  333.3  26.7  251    9-262     1-256 (256)
193 cd06605 PKc_MAPKK Catalytic do 100.0 2.6E-42 5.6E-47  341.5  20.5  252    8-263     1-261 (265)
194 cd05048 PTKc_Ror Catalytic Dom 100.0 4.2E-42   9E-47  343.7  22.2  251    8-259     5-279 (283)
195 cd06612 STKc_MST1_2 Catalytic  100.0 6.5E-42 1.4E-46  336.7  22.9  251    7-262     2-256 (256)
196 cd07867 STKc_CDC2L6 Catalytic  100.0 5.3E-42 1.2E-46  348.7  22.7  246   13-262     6-317 (317)
197 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.1E-41 2.4E-46  350.2  25.3  257    5-264     2-305 (342)
198 cd06626 STKc_MEKK4 Catalytic d 100.0 2.4E-41 5.2E-46  334.3  26.5  254    9-262     1-264 (264)
199 cd07837 STKc_CdkB_plant Cataly 100.0 1.8E-41 3.9E-46  341.2  26.0  254    8-263     1-295 (295)
200 cd07865 STKc_CDK9 Catalytic do 100.0 1.6E-41 3.5E-46  343.9  25.7  259    3-262     7-310 (310)
201 KOG1989|consensus              100.0   1E-42 2.2E-47  369.5  17.6  246    8-259    37-307 (738)
202 KOG0696|consensus              100.0 3.8E-43 8.1E-48  339.9  13.0  256    8-265   349-612 (683)
203 cd07858 STKc_TEY_MAPK_plant Ca 100.0 8.8E-42 1.9E-46  350.3  23.9  259    5-265     2-297 (337)
204 cd05052 PTKc_Abl Catalytic dom 100.0 1.9E-41   4E-46  335.4  25.3  249    7-258     5-257 (263)
205 cd07843 STKc_CDC2L1 Catalytic  100.0 8.1E-42 1.7E-46  343.5  23.0  253    8-262     5-293 (293)
206 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 9.4E-42   2E-46  341.5  23.3  254    8-265     5-272 (284)
207 cd05581 STKc_PDK1 Catalytic do 100.0 7.1E-42 1.5E-46  341.0  22.1  254    8-262     1-280 (280)
208 cd05577 STKc_GRK Catalytic dom 100.0 9.6E-42 2.1E-46  340.1  22.8  246   16-264     1-259 (277)
209 cd06617 PKc_MKK3_6 Catalytic d 100.0 2.8E-41 6.1E-46  337.6  26.1  254    8-264     1-266 (283)
210 cd08217 STKc_Nek2 Catalytic do 100.0 2.7E-41 5.8E-46  333.7  25.6  252    9-262     1-265 (265)
211 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.7E-42 3.7E-47  345.5  17.2  255    6-263     2-257 (277)
212 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.5E-41 3.2E-46  339.6  24.0  255    5-262    13-282 (282)
213 cd07855 STKc_ERK5 Catalytic do 100.0 1.1E-41 2.5E-46  349.1  23.4  260    6-266     3-301 (334)
214 cd06623 PKc_MAPKK_plant_like C 100.0 2.6E-41 5.7E-46  333.9  24.9  255    8-264     1-261 (264)
215 KOG0603|consensus              100.0 1.1E-42 2.4E-47  356.5  15.4  247    3-262   317-566 (612)
216 PHA03390 pk1 serine/threonine- 100.0 1.7E-41 3.7E-46  336.5  23.1  247    5-263    11-266 (267)
217 cd07850 STKc_JNK Catalytic dom 100.0 1.9E-41 4.2E-46  350.0  24.3  252    6-263    14-315 (353)
218 cd06641 STKc_MST3 Catalytic do 100.0 2.1E-41 4.6E-46  337.7  23.7  256    6-264     2-258 (277)
219 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.4E-41 7.4E-46  332.0  24.8  247    8-258     4-253 (256)
220 KOG0577|consensus              100.0 5.7E-43 1.2E-47  351.7  12.2  251    7-263    25-282 (948)
221 cd05049 PTKc_Trk Catalytic dom 100.0 1.4E-41 3.1E-46  339.2  22.1  251    7-258     4-276 (280)
222 cd07835 STKc_CDK1_like Catalyt 100.0 2.7E-41 5.8E-46  337.8  24.1  251   10-262     1-283 (283)
223 cd05579 STKc_MAST_like Catalyt 100.0   2E-41 4.4E-46  334.5  22.4  247   16-263     1-261 (265)
224 cd05088 PTKc_Tie2 Catalytic do 100.0 2.6E-41 5.7E-46  341.6  23.6  249    8-259     7-276 (303)
225 cd05033 PTKc_EphR Catalytic do 100.0 5.4E-41 1.2E-45  332.6  25.0  251    8-259     4-261 (266)
226 PLN00009 cyclin-dependent kina 100.0 6.2E-41 1.3E-45  337.2  25.5  255    8-264     2-289 (294)
227 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.5E-41 9.8E-46  345.8  25.0  256    4-265    11-304 (343)
228 cd05613 STKc_MSK1_N N-terminal 100.0 6.4E-41 1.4E-45  336.5  25.4  256    9-264     1-273 (290)
229 cd06648 STKc_PAK_II Catalytic  100.0 9.6E-41 2.1E-45  334.4  26.1  256    6-265    17-275 (285)
230 cd05061 PTKc_InsR Catalytic do 100.0   6E-41 1.3E-45  336.4  24.6  256    7-263     5-284 (288)
231 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.3E-40 2.8E-45  329.6  26.6  253    8-262     2-264 (264)
232 cd05611 STKc_Rim15_like Cataly 100.0 5.6E-41 1.2E-45  331.2  23.8  245   14-264     2-256 (260)
233 cd05062 PTKc_IGF-1R Catalytic  100.0 4.7E-41   1E-45  335.1  23.1  253    6-259     4-274 (277)
234 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.4E-40   3E-45  333.6  26.5  253    8-264     1-271 (287)
235 cd05090 PTKc_Ror1 Catalytic do 100.0 6.4E-41 1.4E-45  335.2  24.0  251    8-259     5-279 (283)
236 cd05072 PTKc_Lyn Catalytic dom 100.0 8.8E-41 1.9E-45  330.0  24.7  248    7-258     5-256 (261)
237 cd05036 PTKc_ALK_LTK Catalytic 100.0   5E-41 1.1E-45  335.0  23.1  252    7-259     5-274 (277)
238 cd07851 STKc_p38 Catalytic dom 100.0 4.1E-41 8.8E-46  346.2  23.1  255    5-265    12-304 (343)
239 cd08225 STKc_Nek5 Catalytic do 100.0   8E-41 1.7E-45  329.2  24.2  252    9-262     1-257 (257)
240 cd08215 STKc_Nek Catalytic dom 100.0 1.7E-40 3.6E-45  326.5  26.1  252    9-262     1-258 (258)
241 cd05059 PTKc_Tec_like Catalyti 100.0 5.9E-41 1.3E-45  330.4  22.8  248    8-259     4-254 (256)
242 cd05084 PTKc_Fes Catalytic dom 100.0 6.7E-41 1.5E-45  329.1  23.1  244   14-258     1-248 (252)
243 PTZ00024 cyclin-dependent prot 100.0 8.8E-41 1.9E-45  342.6  24.9  260    5-265     5-319 (335)
244 cd05108 PTKc_EGFR Catalytic do 100.0 6.8E-41 1.5E-45  340.6  23.7  250    8-259     7-264 (316)
245 cd06659 STKc_PAK6 Catalytic do 100.0 4.1E-41 8.9E-46  339.1  21.9  256    6-265    19-277 (297)
246 cd05032 PTKc_InsR_like Catalyt 100.0 9.1E-41   2E-45  332.8  24.1  252    6-258     4-273 (277)
247 cd05093 PTKc_TrkB Catalytic do 100.0 8.8E-41 1.9E-45  335.2  24.1  250    7-258     4-274 (288)
248 KOG0983|consensus              100.0 5.7E-42 1.2E-46  316.1  14.1  254    8-264    92-354 (391)
249 cd06607 STKc_TAO Catalytic dom 100.0 1.7E-40 3.7E-45  336.3  26.3  255    4-264    11-272 (307)
250 KOG0596|consensus              100.0 7.6E-42 1.6E-46  342.5  16.1  254    8-264   361-632 (677)
251 cd07840 STKc_CDK9_like Catalyt 100.0 9.3E-41   2E-45  334.2  24.0  252   10-262     1-287 (287)
252 cd07834 STKc_MAPK Catalytic do 100.0 3.5E-41 7.5E-46  344.9  21.3  255    9-264     1-294 (330)
253 cd06624 STKc_ASK Catalytic dom 100.0 1.4E-40 2.9E-45  330.1  24.9  252    9-262     9-268 (268)
254 cd06627 STKc_Cdc7_like Catalyt 100.0 2.7E-40 5.9E-45  324.5  26.7  252    9-262     1-254 (254)
255 cd05068 PTKc_Frk_like Catalyti 100.0 2.1E-40 4.4E-45  327.5  25.9  249    6-258     4-256 (261)
256 cd07864 STKc_CDK12 Catalytic d 100.0 7.5E-41 1.6E-45  337.8  23.2  256    6-262     5-302 (302)
257 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.1E-40 2.3E-45  328.6  23.6  248    8-259     4-254 (256)
258 cd05089 PTKc_Tie1 Catalytic do 100.0   1E-40 2.2E-45  336.3  23.9  249    8-259     2-271 (297)
259 cd05053 PTKc_FGFR Catalytic do 100.0 1.2E-40 2.6E-45  334.9  24.4  252    7-259    11-287 (293)
260 cd05098 PTKc_FGFR1 Catalytic d 100.0 9.1E-41   2E-45  338.3  23.6  253    6-259    16-295 (307)
261 cd07842 STKc_CDK8_like Catalyt 100.0 1.2E-40 2.5E-45  338.6  24.3  253    9-262     1-316 (316)
262 cd08228 STKc_Nek6 Catalytic do 100.0 1.5E-40 3.2E-45  329.4  24.4  250    8-259     2-261 (267)
263 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.1E-40 2.4E-45  348.1  23.8  253    5-258    34-392 (400)
264 KOG4721|consensus              100.0 4.6E-42   1E-46  343.9  12.7  235   13-260   129-365 (904)
265 cd05071 PTKc_Src Catalytic dom 100.0 2.3E-40 4.9E-45  327.5  24.7  248    6-258     4-255 (262)
266 cd06614 STKc_PAK Catalytic dom 100.0 2.2E-40 4.8E-45  331.9  24.9  256    5-264    16-275 (286)
267 cd06647 STKc_PAK_I Catalytic d 100.0 9.3E-41   2E-45  335.9  22.2  258    4-265    15-275 (293)
268 cd05054 PTKc_VEGFR Catalytic d 100.0 5.3E-41 1.2E-45  344.1  20.7  253    6-259     5-329 (337)
269 cd05123 STKc_AGC Catalytic dom 100.0   2E-40 4.3E-45  325.0  23.7  245   16-262     1-250 (250)
270 cd07877 STKc_p38alpha_MAPK14 C 100.0   2E-40 4.3E-45  341.3  24.7  255    4-264    13-305 (345)
271 cd00192 PTKc Catalytic domain  100.0 2.7E-40 5.8E-45  325.8  24.6  245   14-259     1-260 (262)
272 cd06616 PKc_MKK4 Catalytic dom 100.0 7.7E-41 1.7E-45  335.4  20.8  254    8-264     4-272 (288)
273 cd07866 STKc_BUR1 Catalytic do 100.0 1.6E-40 3.4E-45  336.7  23.2  255    7-262     7-311 (311)
274 cd05122 PKc_STE Catalytic doma 100.0 5.9E-40 1.3E-44  321.2  26.2  249    9-261     1-253 (253)
275 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2.9E-40 6.2E-45  326.2  24.1  248    6-258     4-255 (260)
276 KOG0614|consensus              100.0 6.8E-43 1.5E-47  346.0   5.3  253    9-264   421-682 (732)
277 cd05066 PTKc_EphR_A Catalytic  100.0 2.7E-40 5.9E-45  327.8  23.8  250    8-258     4-261 (267)
278 cd05099 PTKc_FGFR4 Catalytic d 100.0   4E-40 8.6E-45  334.7  25.4  253    5-258     9-288 (314)
279 PHA03210 serine/threonine kina 100.0 6.8E-41 1.5E-45  360.1  20.8  257    6-264   146-459 (501)
280 cd05067 PTKc_Lck_Blk Catalytic 100.0 5.1E-40 1.1E-44  324.4  25.3  249    5-258     3-255 (260)
281 cd05583 STKc_MSK_N N-terminal  100.0 3.3E-40 7.1E-45  330.9  24.3  256    9-264     1-271 (288)
282 cd05109 PTKc_HER2 Catalytic do 100.0 3.7E-40 7.9E-45  329.0  24.1  250    7-258     6-263 (279)
283 cd05091 PTKc_Ror2 Catalytic do 100.0 1.1E-40 2.5E-45  333.4  20.4  251    8-259     5-279 (283)
284 cd06606 STKc_MAPKKK Catalytic  100.0   7E-40 1.5E-44  322.0  25.7  253    9-262     1-260 (260)
285 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.5E-40 3.2E-45  328.3  20.9  249    6-258     4-256 (261)
286 KOG0666|consensus              100.0 1.3E-41 2.8E-46  318.9  12.5  259    7-266    23-344 (438)
287 PF07714 Pkinase_Tyr:  Protein  100.0 8.1E-41 1.8E-45  330.1  18.9  247   11-258     2-257 (259)
288 cd05055 PTKc_PDGFR Catalytic d 100.0 3.3E-40 7.2E-45  333.3  23.8  251    7-258    34-296 (302)
289 cd05051 PTKc_DDR Catalytic dom 100.0 3.3E-40 7.1E-45  332.1  23.7  251    7-258     4-292 (296)
290 cd08530 STKc_CNK2-like Catalyt 100.0 4.8E-40 1.1E-44  323.3  24.3  250    9-262     1-256 (256)
291 cd07879 STKc_p38delta_MAPK13 C 100.0 4.3E-40 9.4E-45  338.4  24.9  254    5-265    12-303 (342)
292 cd05116 PTKc_Syk Catalytic dom 100.0   4E-40 8.6E-45  324.7  23.6  242   15-258     2-250 (257)
293 cd07830 STKc_MAK_like Catalyti 100.0 3.8E-40 8.3E-45  329.4  23.7  250   10-262     1-283 (283)
294 PRK13184 pknD serine/threonine 100.0 4.8E-40   1E-44  362.2  26.6  250    8-258     2-284 (932)
295 cd05046 PTK_CCK4 Pseudokinase  100.0 3.2E-40 6.9E-45  328.6  22.8  251    8-259     5-272 (275)
296 cd07852 STKc_MAPK15 Catalytic  100.0   2E-40 4.3E-45  340.3  21.8  258    5-264     4-300 (337)
297 KOG0584|consensus              100.0 1.8E-41 3.9E-46  346.1  13.7  252    7-264    38-301 (632)
298 cd05034 PTKc_Src_like Catalyti 100.0   8E-40 1.7E-44  323.1  25.1  249    6-258     4-256 (261)
299 cd05060 PTKc_Syk_like Catalyti 100.0 6.3E-40 1.4E-44  323.2  24.0  243   14-258     1-250 (257)
300 cd07857 STKc_MPK1 Catalytic do 100.0 9.3E-40   2E-44  334.6  26.2  255    9-264     1-297 (332)
301 cd08226 PK_STRAD_beta Pseudoki 100.0 2.3E-40   5E-45  338.5  21.5  252   13-264     3-313 (328)
302 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 1.3E-39 2.9E-44  322.4  26.2  249    8-258     2-260 (267)
303 KOG4645|consensus              100.0 3.2E-42   7E-47  374.1   7.9  260    6-265  1233-1500(1509)
304 cd06633 STKc_TAO3 Catalytic do 100.0 1.4E-39   3E-44  330.5  26.7  255    5-265    18-279 (313)
305 cd05111 PTK_HER3 Pseudokinase  100.0 7.7E-40 1.7E-44  326.8  24.3  249    8-258     7-263 (279)
306 cd05085 PTKc_Fer Catalytic dom 100.0 8.1E-40 1.7E-44  320.9  24.0  243   14-258     1-246 (250)
307 cd05118 STKc_CMGC Catalytic do 100.0 3.5E-40 7.5E-45  329.4  21.6  251   10-262     1-283 (283)
308 cd05069 PTKc_Yes Catalytic dom 100.0 1.2E-39 2.5E-44  321.9  25.0  247    7-258     5-255 (260)
309 cd05039 PTKc_Csk_like Catalyti 100.0   1E-39 2.2E-44  321.5  24.5  243    7-258     5-251 (256)
310 cd08229 STKc_Nek7 Catalytic do 100.0 4.1E-40 8.9E-45  326.3  21.8  249    8-258     2-260 (267)
311 cd05035 PTKc_Axl_like Catalyti 100.0 7.8E-40 1.7E-44  325.1  23.8  249   10-259     1-268 (273)
312 cd05094 PTKc_TrkC Catalytic do 100.0 7.7E-40 1.7E-44  328.8  24.0  249    8-258     5-277 (291)
313 cd05101 PTKc_FGFR2 Catalytic d 100.0 8.3E-40 1.8E-44  330.7  24.3  253    6-259    13-292 (304)
314 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.2E-39 2.5E-44  326.1  25.1  250    7-258     2-276 (283)
315 KOG0193|consensus              100.0 2.6E-41 5.6E-46  342.7  13.1  247    8-258   392-648 (678)
316 cd06657 STKc_PAK4 Catalytic do 100.0 5.7E-40 1.2E-44  329.9  22.7  254    9-266    21-277 (292)
317 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.8E-39 3.8E-44  331.8  26.7  254    5-264     7-293 (328)
318 cd05065 PTKc_EphR_B Catalytic  100.0   1E-39 2.3E-44  323.9  24.3  250    8-258     4-263 (269)
319 cd05075 PTKc_Axl Catalytic dom 100.0 5.3E-40 1.2E-44  326.4  22.1  249   10-259     1-267 (272)
320 cd05045 PTKc_RET Catalytic dom 100.0 6.8E-40 1.5E-44  329.0  22.9  249    9-258     1-281 (290)
321 cd05097 PTKc_DDR_like Catalyti 100.0 5.8E-40 1.3E-44  330.4  22.4  251    7-258     4-291 (295)
322 smart00219 TyrKc Tyrosine kina 100.0 1.2E-39 2.7E-44  320.6  24.2  248   10-258     1-256 (258)
323 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.3E-39 2.7E-44  323.0  24.3  250    8-258     5-262 (268)
324 cd05050 PTKc_Musk Catalytic do 100.0 6.6E-40 1.4E-44  328.7  22.3  251    7-258     4-284 (288)
325 cd06635 STKc_TAO1 Catalytic do 100.0 1.6E-39 3.5E-44  330.6  25.4  254    5-264    22-282 (317)
326 KOG0695|consensus              100.0 6.2E-41 1.3E-45  316.8  13.7  255    8-264   250-521 (593)
327 cd05095 PTKc_DDR2 Catalytic do 100.0   1E-39 2.3E-44  328.7  23.6  251    7-258     4-292 (296)
328 cd05112 PTKc_Itk Catalytic dom 100.0 1.7E-39 3.7E-44  319.8  24.6  248    8-259     4-254 (256)
329 cd05100 PTKc_FGFR3 Catalytic d 100.0 1.1E-39 2.3E-44  334.4  23.9  253    6-259    10-289 (334)
330 cd05115 PTKc_Zap-70 Catalytic  100.0 1.5E-39 3.3E-44  320.6  24.1  242   15-258     2-250 (257)
331 cd06618 PKc_MKK7 Catalytic dom 100.0 1.4E-39   3E-44  327.8  24.0  257    5-264    12-278 (296)
332 cd05092 PTKc_TrkA Catalytic do 100.0 1.1E-39 2.3E-44  326.0  22.9  250    7-258     4-276 (280)
333 cd05082 PTKc_Csk Catalytic dom 100.0 1.8E-39 3.8E-44  319.8  24.2  241    8-258     6-251 (256)
334 cd07829 STKc_CDK_like Catalyti 100.0 8.1E-40 1.7E-44  326.6  22.1  251   10-262     1-282 (282)
335 KOG0671|consensus              100.0 2.9E-41 6.2E-46  325.7  11.0  253    5-265    86-412 (415)
336 cd05056 PTKc_FAK Catalytic dom 100.0 1.9E-39   4E-44  322.3  24.0  252    6-259     4-261 (270)
337 cd05047 PTKc_Tie Catalytic dom 100.0 1.4E-39   3E-44  323.3  23.0  242   14-258     1-263 (270)
338 cd05103 PTKc_VEGFR2 Catalytic  100.0 9.1E-40   2E-44  336.1  22.2  255    4-259     3-335 (343)
339 cd08222 STKc_Nek11 Catalytic d 100.0 1.1E-39 2.4E-44  321.9  21.7  251    9-262     1-260 (260)
340 cd05057 PTKc_EGFR_like Catalyt 100.0 2.9E-39 6.3E-44  322.5  24.9  250    7-258     6-263 (279)
341 cd07838 STKc_CDK4_6_like Catal 100.0 2.9E-39 6.3E-44  323.5  24.9  249   10-262     1-287 (287)
342 cd05107 PTKc_PDGFR_beta Cataly 100.0   1E-39 2.2E-44  340.7  22.4  252    7-259    36-395 (401)
343 cd05073 PTKc_Hck Catalytic dom 100.0 5.1E-39 1.1E-43  317.3  26.0  249    5-258     3-255 (260)
344 cd08216 PK_STRAD Pseudokinase  100.0 1.1E-39 2.4E-44  331.3  21.7  245   20-264    12-300 (314)
345 cd05043 PTK_Ryk Pseudokinase d 100.0 2.9E-39 6.2E-44  322.7  23.9  251    7-258     5-271 (280)
346 cd05041 PTKc_Fes_like Catalyti 100.0 3.2E-39 6.8E-44  316.9  23.4  243   14-258     1-247 (251)
347 cd06634 STKc_TAO2 Catalytic do 100.0   2E-39 4.4E-44  328.5  22.7  254    5-264    12-272 (308)
348 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 6.2E-40 1.3E-44  323.6  18.4  239   14-259     1-256 (258)
349 KOG0669|consensus              100.0 1.3E-41 2.8E-46  310.2   5.8  262    3-265    12-321 (376)
350 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0   3E-39 6.6E-44  323.3  23.4  251    8-259     4-279 (284)
351 KOG0194|consensus              100.0 5.9E-40 1.3E-44  336.6  18.1  247    9-258   158-415 (474)
352 cd05040 PTKc_Ack_like Catalyti 100.0 4.9E-39 1.1E-43  316.7  23.6  243   14-258     1-253 (257)
353 KOG1035|consensus              100.0 1.5E-40 3.2E-45  359.7  13.8  254    7-263   478-875 (1351)
354 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 4.3E-39 9.3E-44  318.4  22.6  239   14-259     1-260 (262)
355 KOG0608|consensus              100.0 3.5E-40 7.7E-45  333.9  14.8  255    8-264   629-933 (1034)
356 KOG1026|consensus              100.0 3.9E-40 8.5E-45  348.2  15.4  249    8-257   486-756 (774)
357 cd05576 STKc_RPK118_like Catal 100.0 2.1E-39 4.5E-44  315.7  19.4  229   19-262     4-237 (237)
358 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 4.1E-39   9E-44  320.7  20.8  238   15-259     2-272 (274)
359 cd05042 PTKc_Aatyk Catalytic d 100.0 8.2E-39 1.8E-43  317.5  22.4  244   14-258     1-265 (269)
360 cd05110 PTKc_HER4 Catalytic do 100.0 9.5E-39 2.1E-43  322.8  23.0  251    7-259     6-264 (303)
361 KOG1187|consensus              100.0 7.4E-39 1.6E-43  326.8  21.5  248    7-258    74-347 (361)
362 cd05058 PTKc_Met_Ron Catalytic 100.0 1.4E-38 3.1E-43  314.3  23.0  244   14-258     1-254 (262)
363 cd05044 PTKc_c-ros Catalytic d 100.0 9.2E-39   2E-43  316.9  21.0  244   14-258     1-265 (269)
364 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.2E-38 4.8E-43  314.4  23.6  244   14-258     1-265 (269)
365 cd05083 PTKc_Chk Catalytic dom 100.0 2.3E-38 5.1E-43  311.4  23.4  240    8-258     6-249 (254)
366 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.8E-38 3.8E-43  312.9  22.0  236   14-258     1-256 (259)
367 KOG1095|consensus              100.0 8.7E-39 1.9E-43  349.7  21.0  251    7-258   691-956 (1025)
368 cd05086 PTKc_Aatyk2 Catalytic  100.0 4.5E-38 9.7E-43  312.1  24.0  244   14-258     1-264 (268)
369 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0   4E-38 8.7E-43  315.1  22.8  250    7-258     3-278 (284)
370 cd08528 STKc_Nek10 Catalytic d 100.0 4.3E-38 9.3E-43  312.2  22.7  248    9-259     1-266 (269)
371 KOG1151|consensus              100.0 2.1E-39 4.5E-44  316.3  12.1  259    5-263   460-745 (775)
372 PHA02882 putative serine/threo 100.0 1.1E-37 2.4E-42  313.7  24.3  250    6-258    10-291 (294)
373 KOG0668|consensus              100.0 1.4E-39   3E-44  293.1   9.3  248    7-263    37-326 (338)
374 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 6.5E-38 1.4E-42  313.2  21.9  250    8-258     4-278 (284)
375 cd05074 PTKc_Tyro3 Catalytic d 100.0 9.5E-38 2.1E-42  310.3  22.7  249   10-259     1-268 (273)
376 KOG1006|consensus              100.0 5.3E-40 1.1E-44  302.0   5.7  254   12-268    68-336 (361)
377 KOG4250|consensus              100.0 6.6E-39 1.4E-43  331.2  14.4  241    9-251    14-296 (732)
378 KOG0576|consensus              100.0 2.5E-39 5.4E-44  330.5   9.9  450    5-492    12-488 (829)
379 KOG0587|consensus              100.0 6.3E-38 1.4E-42  329.7  20.7  258    4-264    15-287 (953)
380 KOG0590|consensus              100.0 7.7E-40 1.7E-44  352.7   1.5  483    7-494    19-591 (601)
381 KOG0664|consensus              100.0 2.1E-39 4.6E-44  298.8   3.6  254   11-265    56-349 (449)
382 KOG0665|consensus              100.0   7E-38 1.5E-42  295.6  13.5  251    7-264    16-315 (369)
383 PLN03225 Serine/threonine-prot 100.0 4.1E-37 8.9E-42  332.8  21.1  252    7-264   131-455 (566)
384 KOG0196|consensus              100.0   9E-38   2E-42  323.9  12.8  249    9-258   630-886 (996)
385 smart00220 S_TKc Serine/Threon 100.0 4.3E-36 9.3E-41  291.7  22.7  240   20-262     1-244 (244)
386 KOG4257|consensus              100.0 2.9E-37 6.4E-42  312.4  14.5  245   11-257   392-643 (974)
387 KOG1290|consensus              100.0   1E-36 2.3E-41  301.6  17.4  132    6-140    75-222 (590)
388 KOG0670|consensus              100.0 2.2E-37 4.8E-42  307.7  11.1  252    5-263   429-750 (752)
389 PLN03224 probable serine/threo 100.0 1.1E-35 2.4E-40  313.9  24.7  257    7-263   144-504 (507)
390 KOG1094|consensus              100.0 9.1E-37   2E-41  307.2  14.6  250    7-258   537-799 (807)
391 KOG0199|consensus              100.0 1.8E-36 3.9E-41  310.3  14.2  254    8-263   110-372 (1039)
392 KOG4278|consensus              100.0 8.1E-36 1.8E-40  301.5  16.8  246    9-257   268-517 (1157)
393 KOG1027|consensus              100.0 3.4E-36 7.5E-41  315.3  12.6  242   13-264   514-772 (903)
394 KOG1152|consensus              100.0 9.1E-36   2E-40  299.8  10.1  199    8-209   561-770 (772)
395 PLN00113 leucine-rich repeat r 100.0 3.3E-34 7.1E-39  333.7  18.2  238    7-259   689-947 (968)
396 KOG0588|consensus              100.0 6.7E-34 1.4E-38  291.3  16.7  219  326-546    76-339 (786)
397 KOG0200|consensus              100.0 3.6E-33 7.8E-38  305.0  22.4  249    9-258   297-574 (609)
398 KOG0984|consensus              100.0   1E-33 2.3E-38  251.6  12.5  212   11-225    49-270 (282)
399 KOG1025|consensus              100.0 4.3E-33 9.3E-38  290.2  15.6  246   11-258   699-952 (1177)
400 KOG1167|consensus              100.0 3.6E-33 7.9E-38  273.4  12.5  254    4-263    32-385 (418)
401 KOG2052|consensus              100.0 3.2E-32   7E-37  267.4  15.6  245    6-257   209-497 (513)
402 KOG3653|consensus              100.0 2.3E-32   5E-37  270.4  13.0  241    9-256   211-496 (534)
403 KOG1345|consensus              100.0 1.4E-32 3.1E-37  253.7   8.7  255    2-263    18-291 (378)
404 cd00180 PKc Catalytic domain o 100.0 9.3E-31   2E-35  247.9  21.5  213   16-260     1-215 (215)
405 smart00221 STYKc Protein kinas 100.0 1.3E-30 2.9E-35  250.5  20.9  219   10-228     1-222 (225)
406 KOG4717|consensus              100.0 1.3E-31 2.8E-36  266.2  12.7  219  325-545    80-338 (864)
407 KOG0616|consensus              100.0 6.4E-31 1.4E-35  246.0   8.1  153  338-494   125-303 (355)
408 KOG0575|consensus              100.0 2.7E-30 5.8E-35  264.0  11.7  166  330-496    86-277 (592)
409 KOG0615|consensus              100.0 5.5E-31 1.2E-35  256.6   5.6  156  338-495   257-444 (475)
410 PLN00181 protein SPA1-RELATED; 100.0 3.5E-30 7.5E-35  292.4   9.8  200   61-264    27-270 (793)
411 KOG0583|consensus              100.0 7.2E-29 1.6E-33  253.9  11.8  165  328-493    86-280 (370)
412 KOG0604|consensus              100.0 8.4E-29 1.8E-33  231.9  10.7  193  341-535   143-369 (400)
413 KOG0590|consensus              100.0 5.8E-30 1.3E-34  276.2   3.2  257    8-265   317-591 (601)
414 KOG0598|consensus              100.0 8.1E-29 1.8E-33  239.8   9.8  163  331-494    94-287 (357)
415 KOG1024|consensus              100.0 4.1E-28 8.9E-33  234.5  14.1  251    7-258   283-550 (563)
416 KOG0660|consensus              100.0 4.2E-28   9E-33  234.0  11.9  170  332-501    96-323 (359)
417 KOG0599|consensus               99.9 2.6E-28 5.6E-33  225.7   7.9  150  341-492   107-287 (411)
418 smart00750 KIND kinase non-cat  99.9 8.8E-28 1.9E-32  222.5  10.4  158   91-263     1-169 (176)
419 KOG0033|consensus               99.9 7.4E-28 1.6E-32  219.5   8.6  151  341-493    94-272 (355)
420 PRK09188 serine/threonine prot  99.9 1.6E-26 3.5E-31  234.4  16.6  177    5-192    15-210 (365)
421 COG0515 SPS1 Serine/threonine   99.9 1.8E-25 3.8E-30  226.4  24.3  252   10-264     2-280 (384)
422 KOG0581|consensus               99.9 4.9E-27 1.1E-31  227.5  11.4  154  338-494   159-341 (364)
423 KOG0661|consensus               99.9   4E-27 8.6E-32  233.5  10.4  153  340-494    92-297 (538)
424 KOG1164|consensus               99.9 2.1E-25 4.5E-30  226.8  21.6  248    9-259    19-293 (322)
425 KOG0605|consensus               99.9 1.8E-26   4E-31  232.4  10.1  156  338-494   222-451 (550)
426 KOG0694|consensus               99.9 1.2E-26 2.5E-31  240.2   7.9  165  328-494   435-630 (694)
427 KOG0592|consensus               99.9   2E-26 4.4E-31  232.0   9.4  157  338-494   155-344 (604)
428 KOG1163|consensus               99.9 2.3E-25   5E-30  202.9  14.6  241    6-251    13-272 (341)
429 KOG0690|consensus               99.9 1.6E-26 3.5E-31  218.5   7.0  156  338-494   249-430 (516)
430 KOG0586|consensus               99.9 2.8E-26   6E-31  234.9   7.1  219  326-546   119-371 (596)
431 KOG0597|consensus               99.9 4.1E-26 8.9E-31  229.9   8.1  162  331-493    70-256 (808)
432 KOG0611|consensus               99.9 9.1E-26   2E-30  219.0   9.4  163  329-494   120-309 (668)
433 KOG1165|consensus               99.9 1.4E-24   3E-29  206.5  17.2  214    6-224    26-255 (449)
434 KOG0593|consensus               99.9 3.5E-25 7.7E-30  208.0   9.8  151  342-493    86-289 (396)
435 KOG0578|consensus               99.9 4.8E-25   1E-29  223.9   9.6  159  334-494   342-529 (550)
436 KOG0198|consensus               99.9 9.2E-25   2E-29  215.2   8.3  158  338-495    97-283 (313)
437 KOG1240|consensus               99.9   5E-25 1.1E-29  237.2   5.8  241    5-259    20-291 (1431)
438 cd05147 RIO1_euk RIO kinase fa  99.9 1.2E-23 2.6E-28  196.4  13.6  140   13-156     2-167 (190)
439 PRK10359 lipopolysaccharide co  99.9 9.3E-24   2E-28  199.4  12.5  172    6-202    29-216 (232)
440 KOG0663|consensus               99.9 8.2E-24 1.8E-28  201.4  11.2  153  343-496   162-369 (419)
441 KOG0606|consensus               99.9 2.8E-24 6.1E-29  231.4   8.8  219    6-263    81-319 (1205)
442 KOG0659|consensus               99.9 1.1E-23 2.3E-28  194.9  11.0  156  341-497    84-290 (318)
443 KOG0032|consensus               99.9 3.6E-23 7.8E-28  211.9  14.3  151  341-494   120-299 (382)
444 KOG0600|consensus               99.9 2.4E-23 5.1E-28  208.3  12.4  144  351-494   212-406 (560)
445 KOG0591|consensus               99.9 3.1E-23 6.8E-28  193.1  10.5  141  341-482   104-275 (375)
446 cd05145 RIO1_like RIO kinase f  99.9 1.5E-22 3.3E-27  189.7  15.3  142   12-157     1-168 (190)
447 KOG0201|consensus               99.9 2.3E-24 4.9E-29  212.4   2.9  154  339-493    93-268 (467)
448 KOG0610|consensus               99.9 3.2E-23 6.9E-28  202.9  10.4  157  338-494   158-398 (459)
449 KOG0696|consensus               99.9 3.9E-23 8.4E-28  201.2   8.9  156  338-494   431-612 (683)
450 cd05571 STKc_PKB Catalytic dom  99.9 7.5E-23 1.6E-27  208.7  11.3  156  338-494    76-257 (323)
451 PF14531 Kinase-like:  Kinase-l  99.9   1E-22 2.3E-27  198.0  11.4  233    9-250    13-288 (288)
452 KOG0580|consensus               99.9 5.5E-23 1.2E-27  187.6   8.4  153  338-493   103-278 (281)
453 KOG0614|consensus               99.9 2.9E-23 6.2E-28  207.0   7.0  151  341-493   504-682 (732)
454 KOG0595|consensus               99.9 4.6E-23   1E-27  201.7   7.5  153  341-495    93-275 (429)
455 PTZ00263 protein kinase A cata  99.9 1.4E-22 3.1E-27  207.1  11.5  151  339-493   100-276 (329)
456 cd05585 STKc_YPK1_like Catalyt  99.9 2.1E-22 4.6E-27  204.3  12.2  156  338-494    74-253 (312)
457 cd05590 STKc_nPKC_eta Catalyti  99.9 2.1E-22 4.6E-27  205.0  11.4  155  338-493    77-258 (320)
458 cd05612 STKc_PRKX_like Catalyt  99.9   2E-22 4.2E-27  202.5   9.7  152  338-493    82-259 (291)
459 PRK12274 serine/threonine prot  99.9   1E-21 2.2E-26  181.6  13.5  189   11-212     5-211 (218)
460 KOG1035|consensus               99.9 3.9E-21 8.5E-26  209.7  19.9  203   52-266   228-441 (1351)
461 PTZ00426 cAMP-dependent protei  99.9 2.9E-22 6.4E-27  205.5  10.6  152  338-493   112-289 (340)
462 KOG0612|consensus               99.9 2.4E-22 5.2E-27  217.5   9.2  156  338-495   156-345 (1317)
463 cd05591 STKc_nPKC_epsilon Cata  99.9 6.3E-22 1.4E-26  201.7  11.5  153  340-493    79-259 (321)
464 cd05593 STKc_PKB_gamma Catalyt  99.9 8.6E-22 1.9E-26  201.3  11.9  155  338-493    76-256 (328)
465 cd05620 STKc_nPKC_delta Cataly  99.9 7.4E-22 1.6E-26  200.7  11.3  154  339-493    78-253 (316)
466 cd05584 STKc_p70S6K Catalytic   99.9 1.3E-21 2.7E-26  199.6  13.0  155  339-494    82-262 (323)
467 KOG0607|consensus               99.9 3.9E-22 8.4E-27  188.7   8.2  155  341-495   160-368 (463)
468 KOG0585|consensus               99.9 3.8E-22 8.2E-27  198.1   8.0  143  352-494   204-378 (576)
469 KOG0667|consensus               99.9 7.5E-22 1.6E-26  204.5  10.4  150  341-494   271-508 (586)
470 cd05592 STKc_nPKC_theta_delta   99.9   1E-21 2.3E-26  199.6  11.4  155  338-493    77-253 (316)
471 cd05616 STKc_cPKC_beta Catalyt  99.9 1.2E-21 2.5E-26  199.9  11.4  154  339-493    83-262 (323)
472 cd05614 STKc_MSK2_N N-terminal  99.9 1.1E-21 2.4E-26  200.8  11.3  157  338-494    86-273 (332)
473 cd05587 STKc_cPKC Catalytic do  99.9 1.5E-21 3.2E-26  199.2  11.6  154  339-493    83-262 (324)
474 cd05619 STKc_nPKC_theta Cataly  99.9 1.3E-21 2.8E-26  198.8  10.9  156  338-494    77-254 (316)
475 KOG0658|consensus               99.9 9.6E-22 2.1E-26  190.5   9.3  154  342-497   106-315 (364)
476 cd05595 STKc_PKB_beta Catalyti  99.9 1.6E-21 3.5E-26  198.9  11.3  156  338-494    76-257 (323)
477 KOG4158|consensus               99.9 1.8E-21 3.9E-26  189.3  10.9  189   64-254   274-505 (598)
478 PRK10345 hypothetical protein;  99.9 9.3E-21   2E-25  178.6  15.3  133   13-152     7-155 (210)
479 KOG0983|consensus               99.9 2.3E-21   5E-26  179.9  10.3  163  330-495   159-356 (391)
480 KOG0589|consensus               99.9   1E-21 2.2E-26  198.6   8.7  154  338-492    85-262 (426)
481 cd05570 STKc_PKC Catalytic dom  99.9 1.8E-21 3.8E-26  198.1  10.5  156  338-494    77-258 (318)
482 PTZ00284 protein kinase; Provi  99.9 1.1E-21 2.4E-26  210.1   9.5  150  341-494   215-444 (467)
483 cd05586 STKc_Sck1_like Catalyt  99.9 1.1E-21 2.4E-26  200.6   9.1  156  338-494    77-259 (330)
484 KOG0582|consensus               99.9 1.8E-21 3.8E-26  192.2   9.9  165  331-496    93-301 (516)
485 cd05575 STKc_SGK Catalytic dom  99.9 2.3E-21 5.1E-26  197.7  11.2  154  339-493    78-256 (323)
486 cd07848 STKc_CDKL5 Catalytic d  99.8 2.8E-21   6E-26  193.5  11.5  151  341-491    84-287 (287)
487 KOG4279|consensus               99.8 6.4E-22 1.4E-26  203.6   6.7  154  340-494   655-838 (1226)
488 cd05594 STKc_PKB_alpha Catalyt  99.8 1.1E-21 2.3E-26  200.3   8.3  155  338-493    76-257 (325)
489 KOG0594|consensus               99.8   3E-21 6.5E-26  187.3  10.9  154  342-496   101-310 (323)
490 cd05588 STKc_aPKC Catalytic do  99.8 3.1E-21 6.7E-26  197.3  11.5  154  339-493    78-267 (329)
491 cd05615 STKc_cPKC_alpha Cataly  99.8 3.6E-21 7.8E-26  196.2  11.3  155  339-494    83-263 (323)
492 cd05589 STKc_PKN Catalytic dom  99.8 5.4E-21 1.2E-25  195.1  12.3  152  340-493    85-262 (324)
493 KOG0195|consensus               99.8 1.5E-21 3.4E-26  180.8   6.5  237   11-257   193-440 (448)
494 KOG0596|consensus               99.8 3.1E-21 6.8E-26  194.8   9.2  152  342-493   444-632 (677)
495 cd05602 STKc_SGK1 Catalytic do  99.8 4.4E-21 9.5E-26  195.8  10.5  155  338-493    77-256 (325)
496 KOG0986|consensus               99.8   1E-21 2.2E-26  193.9   5.3  164  331-494   254-452 (591)
497 cd05582 STKc_RSK_N N-terminal   99.8 3.4E-21 7.4E-26  196.0   8.9  154  339-493    80-259 (318)
498 cd05604 STKc_SGK3 Catalytic do  99.8 4.3E-21 9.2E-26  195.9   9.6  154  339-493    78-256 (325)
499 cd05618 STKc_aPKC_iota Catalyt  99.8 8.6E-21 1.9E-25  193.9  11.5  154  339-493    78-267 (329)
500 smart00090 RIO RIO-like kinase  99.8 1.6E-20 3.5E-25  181.3  12.3  143    9-156    29-198 (237)

No 1  
>KOG0615|consensus
Probab=100.00  E-value=8.4e-62  Score=470.98  Aligned_cols=260  Identities=40%  Similarity=0.729  Sum_probs=235.0

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC------chHHHHHHHHHHHhCCCCCcceeeEEEEeC
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE------DLPRVKLEINALKHISHQHICKLFQVIETS   78 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~------~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~   78 (568)
                      .+.+.|.+.+.||+|+||.|.+|..+.||+.||||++.+.....      ....+.+|+++|++|+|||||+++++|+..
T Consensus       169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~  248 (475)
T KOG0615|consen  169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP  248 (475)
T ss_pred             hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC
Confidence            46788999999999999999999999999999999998765432      233467999999999999999999999999


Q ss_pred             CEEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCC---CCeEEEeecCccC
Q psy6203          79 SHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRN---QNLKLIDFGLCAK  155 (568)
Q Consensus        79 ~~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~---~~~kl~DFG~a~~  155 (568)
                      +..|+||||++||+|.+++..++.+.+...+.+++|++.||.|||++||+||||||+|||+..+   -.+||+|||+|+.
T Consensus       249 ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~  328 (475)
T KOG0615|consen  249 DSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKV  328 (475)
T ss_pred             CceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhc
Confidence            9999999999999999999999999999999999999999999999999999999999999766   5799999999998


Q ss_pred             CCCCCccccccccCCccccccccccCc--ccCCcccceechhhHHHHHHhCCCCCCCCCHHH-HHHHHHcCCCCCCC---
Q psy6203         156 PEGGLESQLQTSCGSPNYAAPEVIKGK--QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQ-LYDKILNGKYTEPP---  229 (568)
Q Consensus       156 ~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~-~~~~i~~~~~~~~~---  229 (568)
                      ...  .+.+.+.||||.|.|||++.+.  .++..++||||+||+||-+++|.+||....... +.++|..|.+.+.+   
T Consensus       329 ~g~--~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w  406 (475)
T KOG0615|consen  329 SGE--GSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQW  406 (475)
T ss_pred             ccc--ceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhh
Confidence            653  4678899999999999999754  345568999999999999999999998776555 88999999987653   


Q ss_pred             -CCChHHHHHHHHccccCcCCCCCHHHHhcCcccccCC
Q psy6203         230 -WMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGP  266 (568)
Q Consensus       230 -~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  266 (568)
                       .++.++.+||++||..||++|||++|+|+||||+..+
T Consensus       407 ~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  407 DRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             hhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence             3899999999999999999999999999999999654


No 2  
>KOG0588|consensus
Probab=100.00  E-value=5.3e-59  Score=474.64  Aligned_cols=323  Identities=37%  Similarity=0.642  Sum_probs=289.2

Q ss_pred             CccccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCC-cC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCC
Q psy6203           2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKAT-LG-EDLPRVKLEINALKHISHQHICKLFQVIETSS   79 (568)
Q Consensus         2 ~~~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~   79 (568)
                      .-.+-.+-|++++.||.|+.|.|.+|+|..||+.+|||++.+.. .. .....+++||-+|+.+.||||+++|++|++..
T Consensus         6 ~~~~tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~   85 (786)
T KOG0588|consen    6 SHKNTIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQ   85 (786)
T ss_pred             cccccccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCc
Confidence            34556678999999999999999999999999999999998762 22 23457899999999999999999999999999


Q ss_pred             EEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCC
Q psy6203          80 HIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGG  159 (568)
Q Consensus        80 ~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  159 (568)
                      ++|+|.||++||.|++++..++++++.++.++++||+.|+.|||..+|+||||||+|+|++..+++||+|||+|.....+
T Consensus        86 ~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g  165 (786)
T KOG0588|consen   86 HLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG  165 (786)
T ss_pred             eEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999876543


Q ss_pred             CccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHH
Q psy6203         160 LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIV  239 (568)
Q Consensus       160 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li  239 (568)
                        ..+.+.||+|.|+|||++.|.+|.+.++||||+|||||.||||++||++++...++.+++.|.+..|..+++++++||
T Consensus       166 --klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs~Is~eaQdLL  243 (786)
T KOG0588|consen  166 --KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPSNISSEAQDLL  243 (786)
T ss_pred             --ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCCcCCHHHHHHH
Confidence              678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHccccCcCCCCCHHHHhcCcccccCCCCCCC---------CCCCCCcCCcCCHHHHHHHHhc-cCCCHHHHHHHHHhcC
Q psy6203         240 RSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPV---------SFRPDHELREKDDDVIKVMADH-KQLSPDDMWSQLNEWT  309 (568)
Q Consensus       240 ~~~L~~dP~~Rps~~ell~hp~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~  309 (568)
                      .+||..||++|+|.+||+.|||+.-.....+.         .........+.|+.+++.|.-. ..-+++.+.+.|.+..
T Consensus       244 r~ml~VDp~~RiT~~eI~kHP~l~g~~~~~~~~~~~~~~~~~i~s~ps~~~IDp~Il~~l~iLwc~~d~~kl~~kLls~~  323 (786)
T KOG0588|consen  244 RRMLDVDPSTRITTEEILKHPFLSGYTSLPSSKSLRPPVSVPILSIPSIQEIDPLILQHLCILWCGRDPEKLVEKLLSPD  323 (786)
T ss_pred             HHHhccCccccccHHHHhhCchhhcCCCCChhhhcCCCcccceeecCCcccCCHHHHhhhhheeecCChHHHHHHHcCCC
Confidence            99999999999999999999999843322111         1111223457899999988764 4568899999999999


Q ss_pred             CChhHHHHHHHhhhhcc
Q psy6203         310 YNYDTCTYLLLLSRKKQ  326 (568)
Q Consensus       310 ~~~~~~~~~~~~~~~~~  326 (568)
                      -|.....|+||.+++.+
T Consensus       324 ~n~EK~~Y~LLl~~k~r  340 (786)
T KOG0588|consen  324 DNDEKTLYFLLLRRKRR  340 (786)
T ss_pred             cchhHHHHHHHHHhhcc
Confidence            99999999999988764


No 3  
>KOG0575|consensus
Probab=100.00  E-value=9e-59  Score=471.85  Aligned_cols=257  Identities=36%  Similarity=0.677  Sum_probs=241.7

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      .+|..++.||+|||+.||.+++..+|+.||+|++.+..+..  ..+.+.+||++.++|+|||||+++++|++.+++|||+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL   97 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL   97 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence            46999999999999999999999999999999999865543  4568899999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      |+|+.++|..+++.++.++|.+++.+++||+.||.|||+++|+|||||..|+|++++.+|||+|||+|+..... .....
T Consensus        98 ELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~-~Erk~  176 (592)
T KOG0575|consen   98 ELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD-GERKK  176 (592)
T ss_pred             EecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCc-ccccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999987654 24557


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHcccc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV  245 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~  245 (568)
                      +.||||.|+|||++.... ++..+||||+||++|.||+|++||...+..+.+.+|....+..|..+|.++++||.+||+.
T Consensus       177 TlCGTPNYIAPEVl~k~g-HsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~A~dLI~~lL~~  255 (592)
T KOG0575|consen  177 TLCGTPNYIAPEVLNKSG-HSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSAEAKDLIRKLLRP  255 (592)
T ss_pred             eecCCCcccChhHhccCC-CCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCHHHHHHHHHHhcC
Confidence            889999999999998666 5999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcCCCCCHHHHhcCcccccCC
Q psy6203         246 EPGKRIKIQDLLGHNWVKMGP  266 (568)
Q Consensus       246 dP~~Rps~~ell~hp~~~~~~  266 (568)
                      ||.+|||+++||.|+||+.+-
T Consensus       256 ~P~~Rpsl~~vL~h~Ff~~g~  276 (592)
T KOG0575|consen  256 NPSERPSLDEVLDHPFFKSGF  276 (592)
T ss_pred             CcccCCCHHHHhcCHhhhCCC
Confidence            999999999999999996543


No 4  
>KOG0598|consensus
Probab=100.00  E-value=1.3e-56  Score=432.36  Aligned_cols=256  Identities=36%  Similarity=0.694  Sum_probs=237.7

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      .++|+++++||+|+||+|++++.+.|++.||+|++++..+.+  +......|..+|.+++||.||+++..|++.+.+|+|
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV  103 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV  103 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence            367999999999999999999999999999999999887654  367788999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          85 IEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      +||+.||+|+.++.+.+.++|..++-++..|+.||.|||++|||||||||+|||+|..|+++|+|||+|+..... ....
T Consensus       104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~-~~~t  182 (357)
T KOG0598|consen  104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKD-GDAT  182 (357)
T ss_pred             EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccC-CCcc
Confidence            999999999999999999999999999999999999999999999999999999999999999999999865433 3455


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC-CCCChHHHHHHHHcc
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEP-PWMSPNSRQIVRSML  243 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~li~~~L  243 (568)
                      .+.|||+.|||||++.+.. |+.++|.||||+++|+|++|.+||.+.+.....++|..++...+ ..++.+++++|+++|
T Consensus       183 ~tfcGT~eYmAPEil~~~g-y~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~ardll~~LL  261 (357)
T KOG0598|consen  183 RTFCGTPEYMAPEILLGKG-YDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEEARDLLKKLL  261 (357)
T ss_pred             ccccCCccccChHHHhcCC-CCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHHHHHHHHHHh
Confidence            6789999999999999887 69999999999999999999999999999999999999995544 459999999999999


Q ss_pred             ccCcCCCC----CHHHHhcCccccc
Q psy6203         244 QVEPGKRI----KIQDLLGHNWVKM  264 (568)
Q Consensus       244 ~~dP~~Rp----s~~ell~hp~~~~  264 (568)
                      +.||.+|.    ++.+|-+||||+.
T Consensus       262 ~rdp~~RLg~~~d~~~ik~HpfF~~  286 (357)
T KOG0598|consen  262 KRDPRQRLGGPGDAEEIKRHPFFKG  286 (357)
T ss_pred             ccCHHHhcCCCCChHHhhcCccccc
Confidence            99999996    6999999999984


No 5  
>KOG0581|consensus
Probab=100.00  E-value=9.8e-56  Score=426.33  Aligned_cols=252  Identities=27%  Similarity=0.428  Sum_probs=229.8

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCC-EEEEEEec
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSS-HIFMVIEY   87 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~-~~~lV~E~   87 (568)
                      +.+.++.||+|+.|+||+|+|+.|++.+|+|++.........+++.+|+++++..+||+||++|+.|..++ .++|+|||
T Consensus        80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEY  159 (364)
T KOG0581|consen   80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEY  159 (364)
T ss_pred             HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhh
Confidence            56678899999999999999999999999999965444445678899999999999999999999999999 49999999


Q ss_pred             cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          88 CPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH-LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        88 ~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      |+||+|.+++...++++|.....++.+|++||.|||+ .+||||||||+|||++..|.|||||||.+......   ...+
T Consensus       160 MDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---~a~t  236 (364)
T KOG0581|consen  160 MDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---IANT  236 (364)
T ss_pred             cCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh---hccc
Confidence            9999999999988999999999999999999999995 99999999999999999999999999999876543   5578


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCCC-CCCC-CChHHHHHH
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSD-----SIDQLYDKILNGKYT-EPPW-MSPNSRQIV  239 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~-----~~~~~~~~i~~~~~~-~~~~-~~~~~~~li  239 (568)
                      ++||..|||||.+.+.. |+.++||||||++++|+++|++||...     +.-+++..|..+..+ .|.. .|+++++||
T Consensus       237 fvGT~~YMsPERi~g~~-Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV  315 (364)
T KOG0581|consen  237 FVGTSAYMSPERISGES-YSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFV  315 (364)
T ss_pred             ccccccccChhhhcCCc-CCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHH
Confidence            89999999999999987 699999999999999999999999764     677888899887655 4554 899999999


Q ss_pred             HHccccCcCCCCCHHHHhcCccccc
Q psy6203         240 RSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       240 ~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      ..||++||.+|+|+.|+++|||++.
T Consensus       316 ~~CL~Kdp~~R~s~~qLl~Hpfi~~  340 (364)
T KOG0581|consen  316 SCCLRKDPSERPSAKQLLQHPFIKK  340 (364)
T ss_pred             HHHhcCCcccCCCHHHHhcCHHHhh
Confidence            9999999999999999999999984


No 6  
>KOG0583|consensus
Probab=100.00  E-value=3.3e-55  Score=447.85  Aligned_cols=259  Identities=50%  Similarity=0.890  Sum_probs=241.5

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC----CchHHHHHHHHHHHhCC-CCCcceeeEEEEeCC
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG----EDLPRVKLEINALKHIS-HQHICKLFQVIETSS   79 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~   79 (568)
                      ...++|.+++.||+|+||+|++|.+..+|..||+|++.+....    ...+.+.+|+.++++++ ||||+++++++....
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            3467999999999999999999999999999999988775222    23456778999999999 999999999999999


Q ss_pred             EEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCC-CCeEEEeecCccCCCC
Q psy6203          80 HIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRN-QNLKLIDFGLCAKPEG  158 (568)
Q Consensus        80 ~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~-~~~kl~DFG~a~~~~~  158 (568)
                      .+|+|||||.||+|++++.+.+++.|.+++.+++||++|++|||++||+||||||+|||++.+ +++||+|||++.... 
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~-  172 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP-  172 (370)
T ss_pred             eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC-
Confidence            999999999999999999999999999999999999999999999999999999999999999 999999999998764 


Q ss_pred             CCccccccccCCccccccccccCcc-cCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCC-ChHHH
Q psy6203         159 GLESQLQTSCGSPNYAAPEVIKGKQ-YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM-SPNSR  236 (568)
Q Consensus       159 ~~~~~~~~~~gt~~y~aPE~l~~~~-~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~-~~~~~  236 (568)
                      .......+.|||+.|+|||++.+.. +.+.++||||+||+||.|++|..||...+...++..|..+.+..|.++ |++++
T Consensus       173 ~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~S~~~~  252 (370)
T KOG0583|consen  173 GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLLSPEAR  252 (370)
T ss_pred             CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcCCHHHH
Confidence            2345678899999999999999987 778999999999999999999999999999999999999999999999 99999


Q ss_pred             HHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         237 QIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       237 ~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      +|+.+||..||.+|+|+.++++||||+.
T Consensus       253 ~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  253 SLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             HHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            9999999999999999999999999995


No 7  
>KOG4717|consensus
Probab=100.00  E-value=2.6e-55  Score=434.23  Aligned_cols=320  Identities=37%  Similarity=0.676  Sum_probs=283.8

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC-chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQVIETSSHIFM   83 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l   83 (568)
                      .+.+-|.+.+.||+|.|+.|.+|+|..||+.||||++.+..+.+ ....+..|+..|+.++|||||++|++..+...+||
T Consensus        15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyL   94 (864)
T KOG4717|consen   15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYL   94 (864)
T ss_pred             ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEE
Confidence            45677999999999999999999999999999999999887754 24567789999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEE-cCCCCeEEEeecCccCCCCCCc
Q psy6203          84 VIEYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLL-DRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll-~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      |+|+-++|+|+++|.+. ..++|+.+++++.||+.|+.|||...||||||||+|+.+ ..-|-+||+|||++..+.++  
T Consensus        95 iLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG--  172 (864)
T KOG4717|consen   95 ILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG--  172 (864)
T ss_pred             EEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCc--
Confidence            99999999999999875 569999999999999999999999999999999999876 56689999999999988765  


Q ss_pred             cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q psy6203         162 SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRS  241 (568)
Q Consensus       162 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~  241 (568)
                      ..+.+.||+..|.|||++.|..|..+++||||||||||.|++|++||...+..+....|+..++..|..++.++++||.+
T Consensus       173 ~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPshvS~eCrdLI~s  252 (864)
T KOG4717|consen  173 KKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSHVSKECRDLIQS  252 (864)
T ss_pred             chhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchhhhHHHHHHHHH
Confidence            56789999999999999999999899999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccCcCCCCCHHHHhcCcccccCCCCCC--CCCCCCCcCCcCC-HHHHHHHHhccCCCHHHHHHHHHhcCCChhHHHHH
Q psy6203         242 MLQVEPGKRIKIQDLLGHNWVKMGPEDNP--VSFRPDHELREKD-DDVIKVMADHKQLSPDDMWSQLNEWTYNYDTCTYL  318 (568)
Q Consensus       242 ~L~~dP~~Rps~~ell~hp~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  318 (568)
                      ||..||.+|.|.++|..|+|++.+.+...  .+......+.+.+ ..++..|....-.+.+++.+.|...+||..|++|+
T Consensus       253 MLvRdPkkRAslEeI~s~~Wlq~~D~~~sT~iPLvsr~~L~ee~Ha~IIq~Mv~G~IAs~e~Il~aLe~n~YNhiTATYf  332 (864)
T KOG4717|consen  253 MLVRDPKKRASLEEIVSTSWLQAGDRGLSTAIPLVSRHHLPEEAHATIIQQMVAGAIASEEDILRALENNEYNHITATYF  332 (864)
T ss_pred             HHhcCchhhccHHHHhccccccCCCCCccccCceeehhhCChHHHHHHHHHHhcccccCHHHHHHHHhccccchhhhHHH
Confidence            99999999999999999999985433211  1112222333333 35677777777789999999999999999999999


Q ss_pred             HHhhhhcc
Q psy6203         319 LLLSRKKQ  326 (568)
Q Consensus       319 ~~~~~~~~  326 (568)
                      ||-++..+
T Consensus       333 LLAEr~Lr  340 (864)
T KOG4717|consen  333 LLAERVLR  340 (864)
T ss_pred             HHHHHHHH
Confidence            98877554


No 8  
>KOG0616|consensus
Probab=100.00  E-value=2.2e-55  Score=409.68  Aligned_cols=252  Identities=36%  Similarity=0.716  Sum_probs=237.3

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|+++++||.|+||+|.+++++.+|..||+|++++...-  ...+...+|..+|+.+.||+++++++.+.+.+.+|+||
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm  123 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM  123 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence            5789999999999999999999999999999999876653  23556788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      ||++||.|+.++++.+++++..++-++.||+.||+|||+++|++|||||+|||+|.+|.+||+|||+|+....    ..-
T Consensus       124 eyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~----rT~  199 (355)
T KOG0616|consen  124 EYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSG----RTW  199 (355)
T ss_pred             eccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecC----cEE
Confidence            9999999999999999999999999999999999999999999999999999999999999999999987654    356


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHcccc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV  245 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~  245 (568)
                      +.||||.|+|||+++..+ |+.++|.|||||++|||+.|.+||...+..+++++|..++..+|..+++++++||+++|+.
T Consensus       200 TlCGTPeYLAPEii~sk~-ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~v  278 (355)
T KOG0616|consen  200 TLCGTPEYLAPEIIQSKG-YNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFSSDAKDLLKKLLQV  278 (355)
T ss_pred             EecCCccccChHHhhcCC-CCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccCHHHHHHHHHHHhh
Confidence            789999999999999887 5999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcCCCC-----CHHHHhcCccccc
Q psy6203         246 EPGKRI-----KIQDLLGHNWVKM  264 (568)
Q Consensus       246 dP~~Rp-----s~~ell~hp~~~~  264 (568)
                      |-.+|.     ...+|.+||||+.
T Consensus       279 D~t~R~gnlknG~~dIk~H~wF~~  302 (355)
T KOG0616|consen  279 DLTKRFGNLKNGVEDIKNHPWFKG  302 (355)
T ss_pred             hhHhhhcCcCCCccccccCccccc
Confidence            999993     5789999999984


No 9  
>KOG0592|consensus
Probab=100.00  E-value=3.7e-55  Score=438.13  Aligned_cols=256  Identities=30%  Similarity=0.585  Sum_probs=236.9

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHI-SHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      ++|.+++.||+|+|++|++|+++.+++.||||++.+..+-  ...+.+.+|-.+|.+| .||.|++|+..|++...+|+|
T Consensus        73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFv  152 (604)
T KOG0592|consen   73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFV  152 (604)
T ss_pred             hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEE
Confidence            5899999999999999999999999999999999887653  2356788899999999 799999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc---
Q psy6203          85 IEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE---  161 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~---  161 (568)
                      +||+++|+|.++|.+-+.|++..++.++.||+.||+|||++|||||||||+|||+|.+|++||+|||.|+.......   
T Consensus       153 Le~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~  232 (604)
T KOG0592|consen  153 LEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQE  232 (604)
T ss_pred             EEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999876543211   


Q ss_pred             ---------cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Q psy6203         162 ---------SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMS  232 (568)
Q Consensus       162 ---------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~  232 (568)
                               +...+++||..|++||++.... .++.+|||+||||+|+|+.|.+||.+.+..-++++|+.-.+.+++.++
T Consensus       233 ~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~-~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~~fp  311 (604)
T KOG0592|consen  233 NPVDPNQASSRRSSFVGTAEYVSPELLNDSP-AGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPEGFP  311 (604)
T ss_pred             CccCcccccCcccceeeeecccCHHHhcCCC-CCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCCCCC
Confidence                     1114578999999999998876 489999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         233 PNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       233 ~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      +.+++||+++|..||.+|+|++||.+||||..
T Consensus       312 ~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~  343 (604)
T KOG0592|consen  312 EDARDLIKKLLVRDPSDRLTSQQIKAHPFFEG  343 (604)
T ss_pred             HHHHHHHHHHHccCccccccHHHHhhCccccc
Confidence            99999999999999999999999999999974


No 10 
>KOG0595|consensus
Probab=100.00  E-value=1.6e-54  Score=421.08  Aligned_cols=260  Identities=39%  Similarity=0.667  Sum_probs=236.3

Q ss_pred             cccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEE
Q psy6203           4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIF   82 (568)
Q Consensus         4 ~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   82 (568)
                      .+..++|.+.+.||+|+||+||+|+++.++..||||.+.+.... +..+.+..|+.+|+.++|||||+++++++.++.+|
T Consensus         6 ~~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~   85 (429)
T KOG0595|consen    6 MRVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIY   85 (429)
T ss_pred             ccccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEE
Confidence            35568999999999999999999999999999999999887643 34566788999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCC------CCeEEEeecCccCC
Q psy6203          83 MVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRN------QNLKLIDFGLCAKP  156 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~------~~~kl~DFG~a~~~  156 (568)
                      +|||||.||+|.++|..++.++|..++.++.||+.||++||+++||||||||+|||++..      -.+||+|||+|+..
T Consensus        86 lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L  165 (429)
T KOG0595|consen   86 LVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL  165 (429)
T ss_pred             EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC
Confidence            999999999999999999999999999999999999999999999999999999999765      35899999999987


Q ss_pred             CCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC---CCCCCh
Q psy6203         157 EGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE---PPWMSP  233 (568)
Q Consensus       157 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~---~~~~~~  233 (568)
                      ..+  ....+.||+|.|||||++.... |+.|+|+||+|+|+|+|++|+.||...+..++...+..+....   +...++
T Consensus       166 ~~~--~~a~tlcGSplYMAPEV~~~~~-YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~  242 (429)
T KOG0595|consen  166 QPG--SMAETLCGSPLYMAPEVIMSQQ-YDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSN  242 (429)
T ss_pred             Cch--hHHHHhhCCccccCHHHHHhcc-ccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccC
Confidence            653  4567889999999999998766 6899999999999999999999999999999999888876543   345788


Q ss_pred             HHHHHHHHccccCcCCCCCHHHHhcCcccccCC
Q psy6203         234 NSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGP  266 (568)
Q Consensus       234 ~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  266 (568)
                      ...+|+...|+.+|.+|.+..+-+.|+++...+
T Consensus       243 ~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  243 PLRELLISLLQRNPKDRISFEDFFDHPFLAANP  275 (429)
T ss_pred             chhhhhhHHHhcCccccCchHHhhhhhhcccCc
Confidence            888999999999999999999999999998655


No 11 
>KOG0611|consensus
Probab=100.00  E-value=2.6e-54  Score=416.37  Aligned_cols=258  Identities=44%  Similarity=0.783  Sum_probs=242.9

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKLFQVIETSSHIF   82 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   82 (568)
                      +++.+|++.++||+|+||+|.+|.....|+.||||.+++..+.+  +.-.+.+||+||+.|+||||+.+|++|++.+.+.
T Consensus        50 nlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIv  129 (668)
T KOG0611|consen   50 NLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIV  129 (668)
T ss_pred             chhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEE
Confidence            56779999999999999999999999999999999999887754  4557889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc
Q psy6203          83 MVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES  162 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  162 (568)
                      |||||..+|+|+++|.+++.++|.+++.+++||++|+.|||.++|+|||||.+|||+|.|+++||+|||++..+...  .
T Consensus       130 ivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~--k  207 (668)
T KOG0611|consen  130 IVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK--K  207 (668)
T ss_pred             EEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccc--c
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999877653  5


Q ss_pred             ccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHc
Q psy6203         163 QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSM  242 (568)
Q Consensus       163 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~  242 (568)
                      .++++||+|-|.+||++.|.+|-++.+|-|||||+||.|+.|.+||++.+...+..+|.+|.+..|+. +.++.-||+.|
T Consensus       208 fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~-PSdA~gLIRwm  286 (668)
T KOG0611|consen  208 FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPET-PSDASGLIRWM  286 (668)
T ss_pred             HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCC-CchHHHHHHHH
Confidence            67899999999999999999998999999999999999999999999999999999999999977664 56788999999


Q ss_pred             cccCcCCCCCHHHHhcCcccccC
Q psy6203         243 LQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       243 L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                      |..||++|.|+++|..|-|++.+
T Consensus       287 LmVNP~RRATieDiAsHWWvNwg  309 (668)
T KOG0611|consen  287 LMVNPERRATIEDIASHWWVNWG  309 (668)
T ss_pred             HhcCcccchhHHHHhhhheeecc
Confidence            99999999999999999999854


No 12 
>KOG0593|consensus
Probab=100.00  E-value=1.1e-53  Score=398.92  Aligned_cols=255  Identities=26%  Similarity=0.429  Sum_probs=218.0

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCc-hHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      ++|+.+.++|+|+||.|++|+++.||+.||||.+..+..... .+...+||++|++|+|||+|.++++|.....+++|+|
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE   81 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE   81 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence            579999999999999999999999999999999876543322 3456789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          87 YCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        87 ~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      ||+..-|.++-.....++++.++.++.|++.|+.|||++++|||||||+|||++.+|.+||||||+|+..... ....+.
T Consensus        82 ~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~p-gd~YTD  160 (396)
T KOG0593|consen   82 YCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAP-GDNYTD  160 (396)
T ss_pred             ecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCC-cchhhh
Confidence            9977555444444567999999999999999999999999999999999999999999999999999987642 345567


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc--------------C-------CC
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN--------------G-------KY  225 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~--------------~-------~~  225 (568)
                      .+.|.+|.|||.+.|...|+.++||||+||++.||++|.+.|++.+.-+....|..              .       .+
T Consensus       161 YVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~l  240 (396)
T KOG0593|consen  161 YVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRL  240 (396)
T ss_pred             hhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeec
Confidence            78999999999999987899999999999999999999999998775544333321              1       11


Q ss_pred             CCC----------CCCChHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q psy6203         226 TEP----------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       226 ~~~----------~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                      +.+          +.++.-+.+|+++||..||.+|++.+|+|.||||.
T Consensus       241 P~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd  288 (396)
T KOG0593|consen  241 PEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFD  288 (396)
T ss_pred             CCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHH
Confidence            111          23567789999999999999999999999999994


No 13 
>KOG0605|consensus
Probab=100.00  E-value=1.7e-52  Score=419.54  Aligned_cols=258  Identities=31%  Similarity=0.631  Sum_probs=230.3

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      .++|++++.||+|+||.||+|+.+.||..+|+|+++++.+-  .....+..|-.+|...++|+||++|..|++.+++|||
T Consensus       140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi  219 (550)
T KOG0605|consen  140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI  219 (550)
T ss_pred             cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence            36899999999999999999999999999999999987653  3567788899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCC------
Q psy6203          85 IEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEG------  158 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~------  158 (568)
                      |||++||++..+|...+.++++.++.++.+++.|+..||+.|+|||||||+|+|||..|++||+|||+|.-...      
T Consensus       220 MEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~  299 (550)
T KOG0605|consen  220 MEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIES  299 (550)
T ss_pred             EEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999842111      


Q ss_pred             -----------------CCc-----c------------------ccccccCCccccccccccCcccCCcccceechhhHH
Q psy6203         159 -----------------GLE-----S------------------QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVML  198 (568)
Q Consensus       159 -----------------~~~-----~------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il  198 (568)
                                       ...     .                  .....+|||.|+|||++.+.. |+..+|.||||||+
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg-Y~~~cDwWSLG~Im  378 (550)
T KOG0605|consen  300 YRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG-YGKECDWWSLGCIM  378 (550)
T ss_pred             hcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC-CCccccHHHHHHHH
Confidence                             000     0                  001237999999999999988 69999999999999


Q ss_pred             HHHHhCCCCCCCCCHHHHHHHHHcCC--CCCC--CCCChHHHHHHHHccccCcCCCCC---HHHHhcCcccccCC
Q psy6203         199 YALLCGFLPFDSDSIDQLYDKILNGK--YTEP--PWMSPNSRQIVRSMLQVEPGKRIK---IQDLLGHNWVKMGP  266 (568)
Q Consensus       199 ~~lltG~~pf~~~~~~~~~~~i~~~~--~~~~--~~~~~~~~~li~~~L~~dP~~Rps---~~ell~hp~~~~~~  266 (568)
                      ||||.|.+||.++++.+.+.+|.+..  +.+|  ...+++++|||.+||. ||++|..   ++||..||||+...
T Consensus       379 yEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~  452 (550)
T KOG0605|consen  379 YEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVD  452 (550)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCC
Confidence            99999999999999999999998875  3344  4578999999999999 9999985   99999999998543


No 14 
>KOG0033|consensus
Probab=100.00  E-value=1.5e-54  Score=393.20  Aligned_cols=257  Identities=35%  Similarity=0.675  Sum_probs=236.3

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFM   83 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l   83 (568)
                      -|.+.|++.+.||+|.|+.|+++.+..||+.+|+|+++..... .+.+.+.+|+.|-+.|+|||||++.+.+.+.+..|+
T Consensus         8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~yl   87 (355)
T KOG0033|consen    8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL   87 (355)
T ss_pred             ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEE
Confidence            4678999999999999999999999999999999999866543 467889999999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCC---CCeEEEeecCccCCCCCC
Q psy6203          84 VIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRN---QNLKLIDFGLCAKPEGGL  160 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~  160 (568)
                      |+|+++|++|..-|..+.-++|..+..+++||++||.|||.+||||||+||+|+++.+.   ..+||+|||+|....++ 
T Consensus        88 vFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g-  166 (355)
T KOG0033|consen   88 VFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDG-  166 (355)
T ss_pred             EEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCc-
Confidence            99999999999999888889999999999999999999999999999999999999543   35999999999887633 


Q ss_pred             ccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC----CCChHHH
Q psy6203         161 ESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP----WMSPNSR  236 (568)
Q Consensus       161 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~~  236 (568)
                       ......+|||.|||||++...+ |+..+||||.|||||-|+.|.+||.+.+...++++|..+.+..++    .++++++
T Consensus       167 -~~~~G~~GtP~fmaPEvvrkdp-y~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak  244 (355)
T KOG0033|consen  167 -EAWHGFAGTPGYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAK  244 (355)
T ss_pred             -cccccccCCCcccCHHHhhcCC-CCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHH
Confidence             4556778999999999998877 699999999999999999999999999999999999999887654    4899999


Q ss_pred             HHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         237 QIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       237 ~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      +||++||..||.+|+|+.|+|+|||++.
T Consensus       245 ~LvrrML~~dP~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  245 SLIRRMLTVNPKKRITADEALKHPWICN  272 (355)
T ss_pred             HHHHHHhccChhhhccHHHHhCCchhcc
Confidence            9999999999999999999999999984


No 15 
>KOG0586|consensus
Probab=100.00  E-value=1.4e-51  Score=419.56  Aligned_cols=317  Identities=40%  Similarity=0.648  Sum_probs=280.7

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC-chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      -.+.|.+.++||+|.|++|.+|++..||..||+|++++..... ....+.+|+++|+.|+|||||+++.+.+....+|+|
T Consensus        54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV  133 (596)
T KOG0586|consen   54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV  133 (596)
T ss_pred             cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence            3468999999999999999999999999999999999877653 245688999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          85 IEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |||+.+|++++++.+.++..+..++.++.|+++|++|||+++|||||||++|||++.+.++||+|||++.....  ....
T Consensus       134 ~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~--~~~l  211 (596)
T KOG0586|consen  134 MEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDY--GLML  211 (596)
T ss_pred             EEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecc--cccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998764  3567


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccc
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ  244 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~  244 (568)
                      .+.||++.|+|||++.|..+.++.+|+||+|+++|.|+.|.+||++.+..++..+...+++..+-.++.++.++|+++|.
T Consensus       212 qt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~ms~dce~lLrk~lv  291 (596)
T KOG0586|consen  212 QTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYMSCDCEDLLRKFLV  291 (596)
T ss_pred             cccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccceeechhHHHHHHhhc
Confidence            88999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCcCCCCCHHHHhcCcccccCCCCCCCCCCCCCcCCcCCHHHHHHHHhccCCCHHHHHHHHHhcCCChhHHHHHHHhhhh
Q psy6203         245 VEPGKRIKIQDLLGHNWVKMGPEDNPVSFRPDHELREKDDDVIKVMADHKQLSPDDMWSQLNEWTYNYDTCTYLLLLSRK  324 (568)
Q Consensus       245 ~dP~~Rps~~ell~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  324 (568)
                      .+|.+|+++++++.|.|+..+....-..+.........+...+ .+....++...++.+.|...+|+..+++|.++..++
T Consensus       292 l~Pskr~~~dqim~~~W~n~~~~~~~l~p~~e~~~~~~~~~r~-~~m~~~G~~~~~i~~sL~~~k~d~i~a~y~ll~~~~  370 (596)
T KOG0586|consen  292 LNPSKRGPCDQIMKDRWRNDLLEARLLAPLIERSTPFILAKRI-LHMNSIGHRRLKIEESLAKQKFDDINATYLLLGYRK  370 (596)
T ss_pred             cCccccCCHHHhhhhcccchhhhhhhhhcccccCccchhhHHH-HHHHhhccchhhHHHHHhhhhHHHHHHHHhhcchhh
Confidence            9999999999999999998654441111111111112222222 334457899999999999999999999999987765


Q ss_pred             c
Q psy6203         325 K  325 (568)
Q Consensus       325 ~  325 (568)
                      .
T Consensus       371 ~  371 (596)
T KOG0586|consen  371 Q  371 (596)
T ss_pred             h
Confidence            4


No 16 
>KOG0600|consensus
Probab=100.00  E-value=1.7e-51  Score=408.79  Aligned_cols=263  Identities=25%  Similarity=0.421  Sum_probs=228.8

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCc-hHHHHHHHHHHHhCCCCCcceeeEEEEeC--CEEEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLFQVIETS--SHIFM   83 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~--~~~~l   83 (568)
                      .+.|+.+++||+|+||.||+|++..||+.||+|.+......+. .....+||.||++|+||||+++.++..+.  ..+||
T Consensus       116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl  195 (560)
T KOG0600|consen  116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL  195 (560)
T ss_pred             hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence            3568889999999999999999999999999999987664433 44678899999999999999999998776  68999


Q ss_pred             EEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc
Q psy6203          84 VIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES  162 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  162 (568)
                      |+|||+. +|.-++.. .-.|++.+++.+++||+.||+|||++||+|||||.+|||||.+|.+||+|||+|+........
T Consensus       196 VFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~  274 (560)
T KOG0600|consen  196 VFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSA  274 (560)
T ss_pred             EEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCc
Confidence            9999964 78888766 357999999999999999999999999999999999999999999999999999977666555


Q ss_pred             ccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCC--------CC----
Q psy6203         163 QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN--GKYT--------EP----  228 (568)
Q Consensus       163 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~--~~~~--------~~----  228 (568)
                      ..+..+-|.+|.|||++.|...|+.++|+||.||||.||++|++.|.+.+..+.++.|..  |.+.        .|    
T Consensus       275 ~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~  354 (560)
T KOG0600|consen  275 PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATI  354 (560)
T ss_pred             ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccc
Confidence            577778899999999999999999999999999999999999999999987777776643  1111        01    


Q ss_pred             ---------------CCCChHHHHHHHHccccCcCCCCCHHHHhcCcccccCCCCCC
Q psy6203         229 ---------------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNP  270 (568)
Q Consensus       229 ---------------~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~~~~  270 (568)
                                     ..++..+.+|+..||..||.+|.||.++|+|+||...+.+.+
T Consensus       355 ~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~p~~~~  411 (560)
T KOG0600|consen  355 FKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYFTTEPLPCD  411 (560)
T ss_pred             cCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcccccCCCCCC
Confidence                           126778899999999999999999999999999975554433


No 17 
>KOG0585|consensus
Probab=100.00  E-value=6.9e-52  Score=408.01  Aligned_cols=258  Identities=36%  Similarity=0.670  Sum_probs=226.6

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-------------CchHHHHHHHHHHHhCCCCCcceeeE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-------------EDLPRVKLEINALKHISHQHICKLFQ   73 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------------~~~~~~~~Ei~~l~~l~hpnIv~l~~   73 (568)
                      -|+|++++.||+|.||.|.+|++..+++.||||++.+....             ...+.+.+||.+|++|.|||||+|++
T Consensus        96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE  175 (576)
T KOG0585|consen   96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE  175 (576)
T ss_pred             hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence            47999999999999999999999999999999999865432             12457899999999999999999999


Q ss_pred             EEEeC--CEEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeec
Q psy6203          74 VIETS--SHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFG  151 (568)
Q Consensus        74 ~~~~~--~~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG  151 (568)
                      +..+.  +.+|||+|||..|.+...-.....+++.+++.|+++++.||.|||.+|||||||||+|+|++++|++||+|||
T Consensus       176 vLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFG  255 (576)
T KOG0585|consen  176 VLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFG  255 (576)
T ss_pred             eecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccc
Confidence            99654  5899999999999876543222339999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCC----CccccccccCCccccccccccC---cccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC
Q psy6203         152 LCAKPEGG----LESQLQTSCGSPNYAAPEVIKG---KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK  224 (568)
Q Consensus       152 ~a~~~~~~----~~~~~~~~~gt~~y~aPE~l~~---~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~  224 (568)
                      .+.....+    ....+...+|||.|+|||.+.+   ..+.+.+.||||+||+||+|+.|+.||-++...+++.+|.+..
T Consensus       256 Vs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~p  335 (576)
T KOG0585|consen  256 VSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDP  335 (576)
T ss_pred             eeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCc
Confidence            98765222    1223445689999999999976   3455788999999999999999999999999999999999998


Q ss_pred             CCCCCC--CChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         225 YTEPPW--MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       225 ~~~~~~--~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      ..+|..  +.+++++||.+||.+||++|+++.+|..|||+..
T Consensus       336 L~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~  377 (576)
T KOG0585|consen  336 LEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR  377 (576)
T ss_pred             ccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence            877765  7999999999999999999999999999999984


No 18 
>KOG0591|consensus
Probab=100.00  E-value=2.3e-53  Score=393.04  Aligned_cols=244  Identities=28%  Similarity=0.490  Sum_probs=217.9

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC-chHHHHHHHHHHHhCCCCCcceeeE-EEEeCC-EEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQ-VIETSS-HIFMV   84 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~-~~~~~~-~~~lV   84 (568)
                      .+|+|+++||.|+||+||++.+..+|..+|.|.+.-..... ..+....|+.+|++|+|||||++++ .|.+++ .++||
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlniv   98 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIV   98 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHH
Confidence            46999999999999999999999999999999987544432 3456778999999999999999998 454444 48999


Q ss_pred             EeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH--cC--ceecCCCCCceEEcCCCCeEEEeecCccCC
Q psy6203          85 IEYCPGGELLDHIVE----RQRLGEKESRAFFRQILSAVAYLHH--LG--YAHRDLKPENVLLDRNQNLKLIDFGLCAKP  156 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~aL~~LH~--~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  156 (568)
                      ||||++|+|.+.|+.    ++.++|..+++++.|++.||..||+  .+  |+||||||.||+++.+|.+||+|||+++..
T Consensus        99 mE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l  178 (375)
T KOG0591|consen   99 MELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL  178 (375)
T ss_pred             HHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence            999999999999863    4679999999999999999999999  55  999999999999999999999999999887


Q ss_pred             CCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-CC-CCCChH
Q psy6203         157 EGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EP-PWMSPN  234 (568)
Q Consensus       157 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~-~~-~~~~~~  234 (568)
                      ... .....+.+|||.||+||.+.+.+ |+++|||||+||++|||+.-.+||.+++..++.++|.++.++ .| ...|.+
T Consensus       179 ~s~-~tfA~S~VGTPyYMSPE~i~~~~-Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~YS~~  256 (375)
T KOG0591|consen  179 SSK-TTFAHSLVGTPYYMSPERIHESG-YNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHYSTD  256 (375)
T ss_pred             cch-hHHHHhhcCCCcccCHHHHhcCC-CCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHhhhH
Confidence            653 33456678999999999999887 699999999999999999999999999999999999999886 34 468999


Q ss_pred             HHHHHHHccccCcCCCCCH
Q psy6203         235 SRQIVRSMLQVEPGKRIKI  253 (568)
Q Consensus       235 ~~~li~~~L~~dP~~Rps~  253 (568)
                      +..||..|+.+||+.||+.
T Consensus       257 l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  257 LRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             HHHHHHHHccCCcccCCCc
Confidence            9999999999999999986


No 19 
>KOG0597|consensus
Probab=100.00  E-value=2.7e-52  Score=417.58  Aligned_cols=254  Identities=34%  Similarity=0.592  Sum_probs=238.2

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      ++|.+.+.||+|+||.||+|+.+.|.+.||+|.+.+.... .+...+.+|++|++.|+|||||.++++|++..++++|+|
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte   81 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE   81 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence            6899999999999999999999999999999999876544 356789999999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          87 YCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        87 ~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      ||.| +|..++...+.++|+.++.++.|+++||.|||+++|+|||+||.|||++.+|.+|+||||+|+....+ ......
T Consensus        82 ~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~-t~vlts  159 (808)
T KOG0597|consen   82 YAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN-TSVLTS  159 (808)
T ss_pred             hhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccC-ceeeee
Confidence            9966 99999999999999999999999999999999999999999999999999999999999999876653 345566


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccC
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVE  246 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~d  246 (568)
                      ..|||.|||||++.+.+ |+..+|+||||||+||+++|++||...+..++.+.|.......|...+..+.+|++.+|.+|
T Consensus       160 ikGtPlYmAPElv~e~p-yd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~S~~f~nfl~gLL~kd  238 (808)
T KOG0597|consen  160 IKGTPLYMAPELVEEQP-YDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTASSSFVNFLQGLLIKD  238 (808)
T ss_pred             ccCcccccCHHHHcCCC-ccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccccHHHHHHHHHHhhcC
Confidence            77999999999999777 69999999999999999999999999999999999999999899999999999999999999


Q ss_pred             cCCCCCHHHHhcCccccc
Q psy6203         247 PGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       247 P~~Rps~~ell~hp~~~~  264 (568)
                      |.+|+|..+++.|||.+.
T Consensus       239 P~~RltW~~Ll~HpF~k~  256 (808)
T KOG0597|consen  239 PAQRLTWTDLLGHPFWKG  256 (808)
T ss_pred             hhhcccHHHHhcChHHhh
Confidence            999999999999999973


No 20 
>KOG0659|consensus
Probab=100.00  E-value=4.3e-51  Score=375.63  Aligned_cols=260  Identities=29%  Similarity=0.437  Sum_probs=225.9

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCc-hHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      .+|...++||+|.||.||+|++..||+.||||.++.....+. .....+||+.|+.++|+||+.++++|...+.+.||+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE   81 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE   81 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence            579999999999999999999999999999999987765443 3357789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          87 YCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        87 ~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      |++ .+|...|+.+ ..++..+++.++.++++||+|||++.|+||||||.|+|++++|.+||+|||+|+......... .
T Consensus        82 fm~-tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~-~  159 (318)
T KOG0659|consen   82 FMP-TDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQ-T  159 (318)
T ss_pred             ecc-ccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCccc-c
Confidence            995 6899999865 468999999999999999999999999999999999999999999999999999877653332 3


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCC----------------
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--KYTE----------------  227 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~--~~~~----------------  227 (568)
                      ..+.|.+|.|||++.|...|+..+||||.|||+.||+.|.+-|.+++.-+....|.+.  .+..                
T Consensus       160 ~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~  239 (318)
T KOG0659|consen  160 HQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQ  239 (318)
T ss_pred             cceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHh
Confidence            3478999999999999998999999999999999999999999998876666665431  1111                


Q ss_pred             ----C------CCCChHHHHHHHHccccCcCCCCCHHHHhcCcccccCCCCC
Q psy6203         228 ----P------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDN  269 (568)
Q Consensus       228 ----~------~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~~~  269 (568)
                          +      +..+.++.||+.+||.+||.+|+|+.|+|+|+||+..|.+.
T Consensus       240 ~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~pt  291 (318)
T KOG0659|consen  240 QFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLPT  291 (318)
T ss_pred             cCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCCC
Confidence                1      12567889999999999999999999999999999655443


No 21 
>KOG0661|consensus
Probab=100.00  E-value=7.7e-52  Score=408.31  Aligned_cols=260  Identities=31%  Similarity=0.491  Sum_probs=225.0

Q ss_pred             cccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCC-CCCcceeeEEEEeCC-EE
Q psy6203           4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS-HQHICKLFQVIETSS-HI   81 (568)
Q Consensus         4 ~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~-~~   81 (568)
                      ..+.++|.++++||.|+||.||+|+.+.+|+.||||.+++....-+.-.-.||++.|++|+ |||||++.+++.+.+ .+
T Consensus         6 ~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L   85 (538)
T KOG0661|consen    6 VIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRIL   85 (538)
T ss_pred             hhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence            4577899999999999999999999999999999999987654322223467999999999 999999999998887 99


Q ss_pred             EEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC
Q psy6203          82 FMVIEYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL  160 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  160 (568)
                      |+||||| ..+|+++++.+ ..|++..++.|+.||++||+|+|.+|+.|||+||||||+..+..+||+|||+|+..... 
T Consensus        86 ~fVfE~M-d~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk-  163 (538)
T KOG0661|consen   86 YFVFEFM-DCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSK-  163 (538)
T ss_pred             eeeHHhh-hhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccC-
Confidence            9999999 56899999876 56999999999999999999999999999999999999998999999999999976653 


Q ss_pred             ccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc--CC--------------
Q psy6203         161 ESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN--GK--------------  224 (568)
Q Consensus       161 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~--~~--------------  224 (568)
                       ...+..+.|.+|+|||++....+|+.+.||||+|||++|+.+=++.|.|.+.-+.+.+|..  |.              
T Consensus       164 -pPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~  242 (538)
T KOG0661|consen  164 -PPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLAS  242 (538)
T ss_pred             -CCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHH
Confidence             3456778999999999999988999999999999999999999999998775544444432  11              


Q ss_pred             ---CCCC-----------CCCChHHHHHHHHccccCcCCCCCHHHHhcCcccccCC
Q psy6203         225 ---YTEP-----------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGP  266 (568)
Q Consensus       225 ---~~~~-----------~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  266 (568)
                         +.+|           +..++++.++|.+||.+||++||||+|+|+||||....
T Consensus       243 ~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~~  298 (538)
T KOG0661|consen  243 AMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVGR  298 (538)
T ss_pred             HhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCccccccc
Confidence               1111           23688999999999999999999999999999998643


No 22 
>KOG0580|consensus
Probab=100.00  E-value=1.1e-51  Score=374.42  Aligned_cols=252  Identities=29%  Similarity=0.583  Sum_probs=235.7

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++++.||+|.||.||+|+.+.++-.||+|++.++.+..  -...+.+|+++.+.|+||||+++|++|.+...+|+++
T Consensus        22 ~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLil  101 (281)
T KOG0580|consen   22 DDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLIL  101 (281)
T ss_pred             hhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEE
Confidence            67999999999999999999999999999999998776532  2457889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          86 EYCPGGELLDHIV--ERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        86 E~~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      ||..+|+|+..+.  ..+++++..+..++.|++.||.|||.++|+||||||+|+|++..|.+||+|||-+.....   ..
T Consensus       102 Eya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~---~k  178 (281)
T KOG0580|consen  102 EYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS---NK  178 (281)
T ss_pred             EecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCC---CC
Confidence            9999999999998  457899999999999999999999999999999999999999999999999999876543   34


Q ss_pred             cccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHcc
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML  243 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L  243 (568)
                      ..+.|||..|.+||+..+.. ++..+|+|++|++.||++.|.+||.+.+..+.+++|....+.+|..++.+++|+|.+||
T Consensus       179 R~tlcgt~dyl~pEmv~~~~-hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is~~a~dlI~~ll  257 (281)
T KOG0580|consen  179 RKTLCGTLDYLPPEMVEGRG-HDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTISGGAADLISRLL  257 (281)
T ss_pred             ceeeecccccCCHhhcCCCC-ccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccChhHHHHHHHHh
Confidence            56789999999999999887 48899999999999999999999999999999999999999999999999999999999


Q ss_pred             ccCcCCCCCHHHHhcCcccc
Q psy6203         244 QVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       244 ~~dP~~Rps~~ell~hp~~~  263 (568)
                      .++|.+|.+..|++.|||+.
T Consensus       258 ~~~p~~r~~l~~v~~hpwI~  277 (281)
T KOG0580|consen  258 VKNPIERLALTEVMDHPWIV  277 (281)
T ss_pred             ccCccccccHHHHhhhHHHH
Confidence            99999999999999999986


No 23 
>KOG0694|consensus
Probab=100.00  E-value=1.2e-50  Score=416.96  Aligned_cols=255  Identities=32%  Similarity=0.623  Sum_probs=235.1

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCC-CCCcceeeEEEEeCCEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHIS-HQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~~~lV   84 (568)
                      ++|.++++||+|+||+|+++..+.+++.||||++++..+-  ++.+....|..|+...+ ||.++.++..|++.+++|+|
T Consensus       368 ~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~fv  447 (694)
T KOG0694|consen  368 DDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFFV  447 (694)
T ss_pred             cceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEEEE
Confidence            6899999999999999999999999999999999987653  45677888988888775 99999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          85 IEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |||+.||++. ++...+.+++..++-|+..|+.||+|||++|||+||||.+|||+|.+|.+||+|||+++..... ....
T Consensus       448 mey~~Ggdm~-~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~-g~~T  525 (694)
T KOG0694|consen  448 MEYVAGGDLM-HHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ-GDRT  525 (694)
T ss_pred             EEecCCCcEE-EEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCC-CCcc
Confidence            9999999944 4445578999999999999999999999999999999999999999999999999999875533 3467


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccc
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ  244 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~  244 (568)
                      .+.||||.|+|||++.+.. |+.++|.|||||+||||+.|..||.+++.+++++.|.+..+..|.++|.++.++++++|.
T Consensus       526 sTfCGTpey~aPEil~e~~-Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls~ea~~il~~ll~  604 (694)
T KOG0694|consen  526 STFCGTPEFLAPEVLTEQS-YTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSKEAIAIMRRLLR  604 (694)
T ss_pred             ccccCChhhcChhhhccCc-ccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCcccHHHHHHHHHHhc
Confidence            8999999999999999887 699999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCcCCCCC-----HHHHhcCcccccC
Q psy6203         245 VEPGKRIK-----IQDLLGHNWVKMG  265 (568)
Q Consensus       245 ~dP~~Rps-----~~ell~hp~~~~~  265 (568)
                      .||++|..     +++|..||||+..
T Consensus       605 k~p~kRLG~~e~d~~~i~~hpFFr~i  630 (694)
T KOG0694|consen  605 KNPEKRLGSGERDAEDIKKHPFFRSI  630 (694)
T ss_pred             cCcccccCCCCCCchhhhhCCccccC
Confidence            99999986     5889999999843


No 24 
>KOG0198|consensus
Probab=100.00  E-value=1.2e-50  Score=398.16  Aligned_cols=258  Identities=32%  Similarity=0.497  Sum_probs=219.3

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCC--EEEEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSS--HIFMV   84 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~--~~~lV   84 (568)
                      ..++..++.||+|+||.||++.+..+|...|||.+....... .+.+.+|+.+|++++|||||+.++......  .+++.
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~   94 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIF   94 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEee
Confidence            356888999999999999999999999999999987663222 567899999999999999999999754444  69999


Q ss_pred             EeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcC-CCCeEEEeecCccCCCC--CC
Q psy6203          85 IEYCPGGELLDHIVERQ-RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-NQNLKLIDFGLCAKPEG--GL  160 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~-~~~~kl~DFG~a~~~~~--~~  160 (568)
                      |||+++|+|.+++...+ .+++..++.+.+||++||.|||++|||||||||+|||++. ++.+||+|||++.....  ..
T Consensus        95 mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~  174 (313)
T KOG0198|consen   95 MEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTK  174 (313)
T ss_pred             eeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccccc
Confidence            99999999999999876 7999999999999999999999999999999999999999 79999999999887653  11


Q ss_pred             ccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCC-CCHHHHHHHHHcC--CCCCCCCCChHHHH
Q psy6203         161 ESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNG--KYTEPPWMSPNSRQ  237 (568)
Q Consensus       161 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~-~~~~~~~~~i~~~--~~~~~~~~~~~~~~  237 (568)
                      ........||+.|||||++.+.....+++|||||||++.||+||+.||.. ....+..-.+...  .+..|..+++++++
T Consensus       175 ~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~  254 (313)
T KOG0198|consen  175 SDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKD  254 (313)
T ss_pred             ccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHH
Confidence            12234567999999999998543334599999999999999999999986 3333333333333  34677889999999


Q ss_pred             HHHHccccCcCCCCCHHHHhcCcccccC
Q psy6203         238 IVRSMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       238 li~~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                      ||.+|++.||++||||+++|+|||++..
T Consensus       255 Fl~~C~~~~p~~Rpta~eLL~hpf~~~~  282 (313)
T KOG0198|consen  255 FLRKCFKRDPEKRPTAEELLEHPFLKQN  282 (313)
T ss_pred             HHHHHhhcCcccCcCHHHHhhChhhhcc
Confidence            9999999999999999999999999853


No 25 
>KOG0663|consensus
Probab=100.00  E-value=2.3e-50  Score=381.47  Aligned_cols=270  Identities=28%  Similarity=0.379  Sum_probs=229.3

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchH-HHHHHHHHHHhCCCCCcceeeEEEEeC--CEEEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLP-RVKLEINALKHISHQHICKLFQVIETS--SHIFM   83 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~-~~~~Ei~~l~~l~hpnIv~l~~~~~~~--~~~~l   83 (568)
                      .+.|+.+.+|++|+||.||+|+++.|++.||+|.++...-.+... ...+||.+|.+++|||||.+-++....  +.+||
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~  154 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI  154 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence            357899999999999999999999999999999998665433322 456899999999999999999998654  57999


Q ss_pred             EEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc
Q psy6203          84 VIEYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES  162 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  162 (568)
                      |||||+ .+|..++..- .+|+..+++.++.|+++||+|||.+.|+||||||+|+|++..|.+||+|||+|+..... ..
T Consensus       155 VMe~~E-hDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp-~k  232 (419)
T KOG0663|consen  155 VMEYVE-HDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSP-LK  232 (419)
T ss_pred             eHHHHH-hhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCC-cc
Confidence            999996 4888888764 48999999999999999999999999999999999999999999999999999988765 34


Q ss_pred             ccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc--CCC---------------
Q psy6203         163 QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN--GKY---------------  225 (568)
Q Consensus       163 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~--~~~---------------  225 (568)
                      ..+..+.|.+|.|||++.|.+.|+.+.|+||+|||+.||+++++.|.+.+..+...+|..  |.+               
T Consensus       233 ~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k  312 (419)
T KOG0663|consen  233 PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVK  312 (419)
T ss_pred             cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhh
Confidence            456667899999999999999999999999999999999999999999887666666533  111               


Q ss_pred             --CCC------------C-CCChHHHHHHHHccccCcCCCCCHHHHhcCcccccCCCCCCCCCCCCCc
Q psy6203         226 --TEP------------P-WMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPVSFRPDHE  278 (568)
Q Consensus       226 --~~~------------~-~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~~~~~~~~~~~~  278 (568)
                        .++            . .++....+|+..+|.+||.+|.||+|.|.|+||...|.+.+....|..+
T Consensus       313 ~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~p~~P~~~Pt~P  380 (419)
T KOG0663|consen  313 KMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPLPIDPSMFPTWP  380 (419)
T ss_pred             ccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCCCCChhhcCCCc
Confidence              011            0 1457889999999999999999999999999999877666555554443


No 26 
>KOG0660|consensus
Probab=100.00  E-value=4.4e-50  Score=385.62  Aligned_cols=259  Identities=29%  Similarity=0.455  Sum_probs=221.8

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCc-CCchHHHHHHHHHHHhCCCCCcceeeEEEEe-----C
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL-GEDLPRVKLEINALKHISHQHICKLFQVIET-----S   78 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~-----~   78 (568)
                      ++..+|...+.||+|+||.|+.|.++.+|+.||+|.+..... ....++..+|+++|+.++|+||+.+.+++..     -
T Consensus        19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f   98 (359)
T KOG0660|consen   19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF   98 (359)
T ss_pred             eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence            456678888999999999999999999999999998864322 2346788899999999999999999999854     4


Q ss_pred             CEEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCC
Q psy6203          79 SHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEG  158 (568)
Q Consensus        79 ~~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  158 (568)
                      +.+|+|+|++ +.+|.+.|+.+..++++.++.++.||+.||+|+|+.||+||||||+|++++.+..+||+|||+|+....
T Consensus        99 ~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~  177 (359)
T KOG0660|consen   99 NDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDK  177 (359)
T ss_pred             ceeEEehhHH-hhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeeccc
Confidence            5799999999 679999998888899999999999999999999999999999999999999999999999999987643


Q ss_pred             C-CccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC--------------
Q psy6203         159 G-LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--------------  223 (568)
Q Consensus       159 ~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~--------------  223 (568)
                      . ....++..+.|.+|.|||++.....|+.+.||||+|||+.||++|++.|.+.+.-..+..|..-              
T Consensus       178 ~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s  257 (359)
T KOG0660|consen  178 FFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRS  257 (359)
T ss_pred             cCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhcc
Confidence            2 1233466788999999999988777899999999999999999999999887654444433221              


Q ss_pred             ---------CCCC--------CCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         224 ---------KYTE--------PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       224 ---------~~~~--------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                               ....        -+..++.+.+|+.+||..||.+|+|++|+|+|||+..
T Consensus       258 ~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~  315 (359)
T KOG0660|consen  258 EKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAP  315 (359)
T ss_pred             HHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhh
Confidence                     1111        1357899999999999999999999999999999984


No 27 
>KOG0032|consensus
Probab=100.00  E-value=2.9e-49  Score=403.71  Aligned_cols=258  Identities=40%  Similarity=0.721  Sum_probs=236.3

Q ss_pred             cccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--chHHHHHHHHHHHhCC-CCCcceeeEEEEeCCE
Q psy6203           4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHIS-HQHICKLFQVIETSSH   80 (568)
Q Consensus         4 ~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~   80 (568)
                      .++...|++.+.||+|.||.||+|+++.||+.+|+|++.+.....  ....+.+|+.+|+++. |||||.++++|++...
T Consensus        31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~  110 (382)
T KOG0032|consen   31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDS  110 (382)
T ss_pred             ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCe
Confidence            456789999999999999999999999999999999998877643  3468999999999998 9999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCC----CCeEEEeecCccCC
Q psy6203          81 IFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRN----QNLKLIDFGLCAKP  156 (568)
Q Consensus        81 ~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~----~~~kl~DFG~a~~~  156 (568)
                      +++|||+|.||+|++.|... .++|..+..++.|++.|++|||+.||+||||||+|+|+...    +.+|++|||+|...
T Consensus       111 ~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~  189 (382)
T KOG0032|consen  111 VYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFI  189 (382)
T ss_pred             EEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEc
Confidence            99999999999999999887 49999999999999999999999999999999999999543    47999999999887


Q ss_pred             CCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCC
Q psy6203         157 EGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEP----PWMS  232 (568)
Q Consensus       157 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~----~~~~  232 (568)
                      ..  .......|||+.|+|||++.... |+..+||||+||++|.|++|.+||.+.+.......|..+.+.+.    +.++
T Consensus       190 ~~--~~~~~~~~Gtp~y~APEvl~~~~-y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is  266 (382)
T KOG0032|consen  190 KP--GERLHTIVGTPEYVAPEVLGGRP-YGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDIS  266 (382)
T ss_pred             cC--CceEeeecCCccccCchhhcCCC-CCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccC
Confidence            65  45677889999999999998766 69999999999999999999999999999999999999987543    3479


Q ss_pred             hHHHHHHHHccccCcCCCCCHHHHhcCcccccC
Q psy6203         233 PNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       233 ~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                      ..++++|++||..||.+|+|+.++|+|||++..
T Consensus       267 ~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  267 ESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             HHHHHHHHHhcccCcccCCCHHHHhcCccccCC
Confidence            999999999999999999999999999999853


No 28 
>KOG0603|consensus
Probab=100.00  E-value=4.4e-51  Score=418.22  Aligned_cols=458  Identities=24%  Similarity=0.407  Sum_probs=333.6

Q ss_pred             eecccCCeEEEEEEE---cCCCcEEEEEEeecCCcCC-chHHHHHHHHHHHhCC-CCCcceeeEEEEeCCEEEEEEeccC
Q psy6203          15 TVGSGGFAKVKLATH---VLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHIS-HQHICKLFQVIETSSHIFMVIEYCP   89 (568)
Q Consensus        15 ~lG~G~~g~V~~~~~---~~~~~~vavK~~~~~~~~~-~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~~~lV~E~~~   89 (568)
                      ++|+|+||.|++++.   ...|..||+|++++..... .......|..++..++ ||.+|+++..++.+...++++++..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            479999999998753   3457789999998766532 2224555778888887 9999999999999999999999999


Q ss_pred             CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccC
Q psy6203          90 GGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCG  169 (568)
Q Consensus        90 ~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~g  169 (568)
                      ||+|...+.+...+.+...+.+...++-|++++|+.+|+|||+|++||+++.+|.+++.|||+++.....     ...||
T Consensus        81 gg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~-----~~~cg  155 (612)
T KOG0603|consen   81 GGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKE-----KIACG  155 (612)
T ss_pred             cchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhh-----hhccc
Confidence            9999999988889999999999999999999999999999999999999999999999999998765432     12299


Q ss_pred             CccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCC
Q psy6203         170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK  249 (568)
Q Consensus       170 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~  249 (568)
                      |..|||||++.+   ...++|.||+|++.++|+||..||.+    +...+|...++..|..++..+++++..++..+|..
T Consensus       156 t~eymApEI~~g---h~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~~l~~~a~~~~~~l~~r~p~n  228 (612)
T KOG0603|consen  156 TYEYRAPEIING---HLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPRELSAEARSLFRQLFKRNPEN  228 (612)
T ss_pred             chhhhhhHhhhc---cCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCchhhhHHHHHHHHHHHhhCHHH
Confidence            999999999983   36789999999999999999999987    77888999899999999999999999999999999


Q ss_pred             CCC-----HHHHhcCcccccCCC------CCCCCCCCCCc-----------------------------------CCcCC
Q psy6203         250 RIK-----IQDLLGHNWVKMGPE------DNPVSFRPDHE-----------------------------------LREKD  283 (568)
Q Consensus       250 Rps-----~~ell~hp~~~~~~~------~~~~~~~~~~~-----------------------------------~~~~~  283 (568)
                      |..     +.|+++|++|.....      ..+..+.+...                                   .+...
T Consensus       229 rLg~~~~~~~eik~h~f~~~i~~~~l~~r~~~~~fkp~~~~e~~~~~fd~eft~~~P~dsp~~~~~~s~~~if~g~sfva  308 (612)
T KOG0603|consen  229 RLGAGPDGVDEIKQHEFFQSIDWNELEARSRPPPFKPGSITERDVAQFDPEFTSQVPADSPLLSASGSDHTIFSGPSFVA  308 (612)
T ss_pred             HhccCcchhHHHhccchheeeeHhhHhhcCCCCCCCCcccchhhhhhcCchhccCCcccCCCCCCCccccchhcCCCccC
Confidence            985     579999999963211      11111111100                                   00001


Q ss_pred             HHHHHHHHhccCCCHHHHHHHHHhc-----CCChhH---HHHHHHhhhhc--------------cCCccCCCCcch----
Q psy6203         284 DDVIKVMADHKQLSPDDMWSQLNEW-----TYNYDT---CTYLLLLSRKK--------------QGKQYYGSETDV----  337 (568)
Q Consensus       284 ~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~---~~~~~~~~~~~--------------~~~~~~~~~~~~----  337 (568)
                      ..++.......-...-+....+.+.     ++....   ..+.+....+.              +..++..+-.++    
T Consensus       309 ~~il~~~~~~~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~~~~e~~~~~~~~~h~niv~~~~v~~~~  388 (612)
T KOG0603|consen  309 PGVLEDAVTAPFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADDNQDEIPISLLVRDHPNIVKSHDVYEDG  388 (612)
T ss_pred             hHHhhccccCCcchhhccccccCCCCccceeeeeccccccchhheeccccccccccccchhhhhcCCCcceeecceecCC
Confidence            1111110000000000000000000     000000   00111111110              011222222222    


Q ss_pred             ---hhh-----HHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------C---------cceeEEEccccCccccc
Q psy6203         338 ---WSM-----GVMLYALLCGFLPFDSDSIDQLYDKILSHF------------M---------PICTILISQYFPTILLP  388 (568)
Q Consensus       338 ---~~~-----g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~---------~~~~iki~dfG~~~~~~  388 (568)
                         |.+     |+.+.+-++....+. .++..++.++++++            +         .+++|+|+|||++....
T Consensus       389 ~~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~  467 (612)
T KOG0603|consen  389 KEIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELE  467 (612)
T ss_pred             ceeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCc
Confidence               221     445544455444555 78888999999864            2         34567888999765543


Q ss_pred             CCCCceecccccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCCCCCHHHHH
Q psy6203         389 CKVGQVINLLRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILNGKYTEPPWMSPNSRQ  466 (568)
Q Consensus       389 ~~~~~~~~~~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~s~~~~~  466 (568)
                      .+    ..+-|-|..|+|||+ ....|+.++||||||++||+||+|+.||...... +++..|..+.+.  .++|..++|
T Consensus       468 ~~----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s--~~vS~~AKd  541 (612)
T KOG0603|consen  468 RS----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS--ECVSDEAKD  541 (612)
T ss_pred             hh----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc--cccCHHHHH
Confidence            22    345577889999999 7889999999999999999999999999876544 667766665444  889999999


Q ss_pred             HHHHccCCCcCCCCCHHHHhcCccc
Q psy6203         467 IVRSMLQVEPGKRIKIQDLLGHNWV  491 (568)
Q Consensus       467 li~~~L~~dp~~R~t~~~~l~hp~~  491 (568)
                      ||+.||+.||.+|+++.+++.||||
T Consensus       542 Ll~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  542 LLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             HHHHhccCChhhCcChhhhccCcch
Confidence            9999999999999999999999999


No 29 
>KOG0582|consensus
Probab=100.00  E-value=2.6e-49  Score=387.63  Aligned_cols=263  Identities=30%  Similarity=0.463  Sum_probs=230.3

Q ss_pred             ccccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEE
Q psy6203           3 YIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIF   82 (568)
Q Consensus         3 ~~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   82 (568)
                      +..-.+.|++...||.|..++||+|+.+.+++.||||++.......+.+.+.+|+..|+.++||||++++..|..++.+|
T Consensus        21 ~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LW  100 (516)
T KOG0582|consen   21 FPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELW  100 (516)
T ss_pred             CCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeE
Confidence            34456789999999999999999999999999999999998888777889999999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC
Q psy6203          83 MVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL  160 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  160 (568)
                      +||.||.+|++.+++...  ..++|..+..|++++++||.|||.+|.||||||+.||||+.+|.|||+|||.+.......
T Consensus       101 vVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G  180 (516)
T KOG0582|consen  101 VVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG  180 (516)
T ss_pred             EeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence            999999999999999874  459999999999999999999999999999999999999999999999999876433221


Q ss_pred             c---cccccccCCcccccccc-ccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC--------
Q psy6203         161 E---SQLQTSCGSPNYAAPEV-IKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEP--------  228 (568)
Q Consensus       161 ~---~~~~~~~gt~~y~aPE~-l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~--------  228 (568)
                      .   ....+.+||++|||||+ .+....|+.|+||||||++..||.+|..||....+.++.-.-.++.++.+        
T Consensus       181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d  260 (516)
T KOG0582|consen  181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKD  260 (516)
T ss_pred             ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChH
Confidence            1   12256789999999999 45555689999999999999999999999988776665555555554422        


Q ss_pred             --CCCChHHHHHHHHccccCcCCCCCHHHHhcCcccccC
Q psy6203         229 --PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       229 --~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                        ...+..++++|..||++||.+|||++++|+|+||+..
T Consensus       261 ~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~  299 (516)
T KOG0582|consen  261 EDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKA  299 (516)
T ss_pred             HhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhc
Confidence              1267789999999999999999999999999999853


No 30 
>KOG0578|consensus
Probab=100.00  E-value=7.4e-50  Score=403.65  Aligned_cols=257  Identities=31%  Similarity=0.536  Sum_probs=228.1

Q ss_pred             cccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEE
Q psy6203           4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFM   83 (568)
Q Consensus         4 ~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l   83 (568)
                      .+....|...++||+|+.|.||.|+...+++.||+|.+...... ..+.+.+|+.+|+..+|+|||++++.|...+.+++
T Consensus       269 ~dP~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~-~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWV  347 (550)
T KOG0578|consen  269 GDPRSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP-KKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWV  347 (550)
T ss_pred             CChhhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC-chhhhHHHHHHHHhccchHHHHHHHHhcccceeEE
Confidence            45677899999999999999999999999999999999876543 34567889999999999999999999988899999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          84 VIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      ||||++||+|.+.+.. ..++|.++..|+++++.||+|||.+||+|||||.+|||++.+|.+||+|||+|....... ..
T Consensus       348 VMEym~ggsLTDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~-~K  425 (550)
T KOG0578|consen  348 VMEYMEGGSLTDVVTK-TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ-SK  425 (550)
T ss_pred             EEeecCCCchhhhhhc-ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeecccccc-Cc
Confidence            9999999999888754 559999999999999999999999999999999999999999999999999998876643 24


Q ss_pred             cccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCH-HHHHHHHHcCCCC--CCCCCChHHHHHHH
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSI-DQLYDKILNGKYT--EPPWMSPNSRQIVR  240 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~-~~~~~~i~~~~~~--~~~~~~~~~~~li~  240 (568)
                      ..+.+|||+|||||++.... |++++||||||++++||+-|.+||-..+. ..++....+|.+.  .+..+|+.+++|+.
T Consensus       426 R~TmVGTPYWMAPEVvtrk~-YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~  504 (550)
T KOG0578|consen  426 RSTMVGTPYWMAPEVVTRKP-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLD  504 (550)
T ss_pred             cccccCCCCccchhhhhhcc-cCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHH
Confidence            56779999999999998877 69999999999999999999999975554 4444444555543  46679999999999


Q ss_pred             HccccCcCCCCCHHHHhcCccccc
Q psy6203         241 SMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       241 ~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      +||+.|+.+|++|.|+|+||||+.
T Consensus       505 ~cL~~dv~~RasA~eLL~HpFl~~  528 (550)
T KOG0578|consen  505 RCLVVDVEQRASAKELLEHPFLKM  528 (550)
T ss_pred             HHhhcchhcCCCHHHHhcChhhhh
Confidence            999999999999999999999974


No 31 
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00  E-value=7.9e-49  Score=401.02  Aligned_cols=252  Identities=34%  Similarity=0.651  Sum_probs=231.1

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++.+.||+|+||.||+|++..+|+.||+|++.+....  .....+.+|+.++++++||||+++++++.+.+..|+||
T Consensus        18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   97 (329)
T PTZ00263         18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL   97 (329)
T ss_pred             hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence            6899999999999999999999999999999999765322  23456888999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      ||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......    ..
T Consensus        98 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~----~~  173 (329)
T PTZ00263         98 EFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR----TF  173 (329)
T ss_pred             cCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC----cc
Confidence            99999999999998889999999999999999999999999999999999999999999999999998765332    23


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHcccc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV  245 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~  245 (568)
                      ..+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+..+..+.+..+....+.++++.+++||.+||+.
T Consensus       174 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~  252 (329)
T PTZ00263        174 TLCGTPEYLAPEVIQSKG-HGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNWFDGRARDLVKGLLQT  252 (329)
T ss_pred             eecCChhhcCHHHHcCCC-CCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCCCCCHHHHHHHHHHhhc
Confidence            457999999999998776 5899999999999999999999999988888889999998888888999999999999999


Q ss_pred             CcCCCCC-----HHHHhcCccccc
Q psy6203         246 EPGKRIK-----IQDLLGHNWVKM  264 (568)
Q Consensus       246 dP~~Rps-----~~ell~hp~~~~  264 (568)
                      ||.+|++     +++++.||||+.
T Consensus       253 dP~~R~~~~~~~~~~ll~hp~f~~  276 (329)
T PTZ00263        253 DHTKRLGTLKGGVADVKNHPYFHG  276 (329)
T ss_pred             CHHHcCCCCCCCHHHHhcCCccCC
Confidence            9999997     799999999974


No 32 
>KOG0599|consensus
Probab=100.00  E-value=1.7e-50  Score=372.06  Aligned_cols=257  Identities=36%  Similarity=0.625  Sum_probs=231.1

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC---Cc----hHHHHHHHHHHHhC-CCCCcceeeEEEE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG---ED----LPRVKLEINALKHI-SHQHICKLFQVIE   76 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~----~~~~~~Ei~~l~~l-~hpnIv~l~~~~~   76 (568)
                      ++-+.|.-.+.||.|..+.|..+.++.+|..+|+|++....-.   +.    .+....|+.||+++ .||+|+++.++|+
T Consensus        14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye   93 (411)
T KOG0599|consen   14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE   93 (411)
T ss_pred             hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence            3456788899999999999999999999999999998743322   21    23456699999998 5999999999999


Q ss_pred             eCCEEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCC
Q psy6203          77 TSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKP  156 (568)
Q Consensus        77 ~~~~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  156 (568)
                      ++..+++|+|.|+.|.|+|++.+...++|.+.+.|++|++.|+.|||.++||||||||+|||++++.++||+|||+|+..
T Consensus        94 s~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l  173 (411)
T KOG0599|consen   94 SDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQL  173 (411)
T ss_pred             CcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeecc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999988


Q ss_pred             CCCCccccccccCCcccccccccc-----CcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC--C
Q psy6203         157 EGGLESQLQTSCGSPNYAAPEVIK-----GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEP--P  229 (568)
Q Consensus       157 ~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~--~  229 (568)
                      ..+  ..+...||||+|.|||.+.     +.+.|+..+|+||+|||+|.|+.|.+||......-+...|..|++.+.  .
T Consensus       174 ~~G--ekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~spe  251 (411)
T KOG0599|consen  174 EPG--EKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPE  251 (411)
T ss_pred             CCc--hhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcc
Confidence            765  5677889999999999985     345578899999999999999999999998877778889999988753  3


Q ss_pred             --CCChHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q psy6203         230 --WMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       230 --~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                        .+|...++||.+||+.||.+|+|++|+|.||||.
T Consensus       252 Wadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~  287 (411)
T KOG0599|consen  252 WADISATVKDLISRLLQVDPTKRITAKEALAHPFFI  287 (411)
T ss_pred             hhhccccHHHHHHHHHeeCchhcccHHHHhcChHHH
Confidence              3788999999999999999999999999999995


No 33 
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00  E-value=5.2e-49  Score=395.49  Aligned_cols=252  Identities=33%  Similarity=0.614  Sum_probs=229.9

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|++......  .....+.+|+.++++++||||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   80 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM   80 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence            5799999999999999999999999999999999754322  23456788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      ||+++|+|.+++...+.+++..+..++.||+.||+|||++||+||||||+|||++.+|.+||+|||++......    ..
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~----~~  156 (291)
T cd05612          81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR----TW  156 (291)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC----cc
Confidence            99999999999998889999999999999999999999999999999999999999999999999998765332    23


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHcccc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV  245 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~  245 (568)
                      ..+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+..+..+.+..+....+...++.+++||++||+.
T Consensus       157 ~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~  235 (291)
T cd05612         157 TLCGTPEYLAPEVIQSKG-HNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRHLDLYAKDLIKKLLVV  235 (291)
T ss_pred             cccCChhhcCHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCccCCHHHHHHHHHHcCC
Confidence            457999999999998766 5899999999999999999999999999888999999988888888999999999999999


Q ss_pred             CcCCCCC-----HHHHhcCccccc
Q psy6203         246 EPGKRIK-----IQDLLGHNWVKM  264 (568)
Q Consensus       246 dP~~Rps-----~~ell~hp~~~~  264 (568)
                      ||.+|++     ++|++.||||+.
T Consensus       236 dp~~R~~~~~~~~~~~l~h~~~~~  259 (291)
T cd05612         236 DRTRRLGNMKNGADDVKNHRWFKS  259 (291)
T ss_pred             CHHHccCCccCCHHHHhcCccccC
Confidence            9999995     999999999974


No 34 
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00  E-value=2.4e-48  Score=396.48  Aligned_cols=249  Identities=32%  Similarity=0.642  Sum_probs=224.7

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCC
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGG   91 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g   91 (568)
                      +.||+|+||.||+|.+..+|+.||+|++++....  .....+.+|+.++++++||||+++++++...+.+|+||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~   80 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence            4799999999999999999999999999864322  23456778999999999999999999999999999999999999


Q ss_pred             ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCCc
Q psy6203          92 ELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP  171 (568)
Q Consensus        92 ~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~  171 (568)
                      +|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... .......+||+
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~-~~~~~~~~gt~  159 (323)
T cd05571          81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD-GATMKTFCGTP  159 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC-CCcccceecCc
Confidence            99999988889999999999999999999999999999999999999999999999999998753221 12234567999


Q ss_pred             cccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCCC
Q psy6203         172 NYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRI  251 (568)
Q Consensus       172 ~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  251 (568)
                      .|+|||++.+.. ++.++|||||||++|+|++|..||...+.......+..+....+..+++++.+||++||+.||++||
T Consensus       160 ~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~  238 (323)
T cd05571         160 EYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRL  238 (323)
T ss_pred             cccChhhhcCCC-CCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHcC
Confidence            999999998766 5899999999999999999999999998888888888888888888999999999999999999999


Q ss_pred             -----CHHHHhcCccccc
Q psy6203         252 -----KIQDLLGHNWVKM  264 (568)
Q Consensus       252 -----s~~ell~hp~~~~  264 (568)
                           ++.++++||||..
T Consensus       239 ~~~~~~~~~ll~h~~f~~  256 (323)
T cd05571         239 GGGPEDAKEIMEHRFFAS  256 (323)
T ss_pred             CCCCCCHHHHHcCCCcCC
Confidence                 8999999999974


No 35 
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00  E-value=1.1e-47  Score=393.75  Aligned_cols=252  Identities=30%  Similarity=0.558  Sum_probs=228.2

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCC-cEEEEEEeecCCc--CCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTG-EKVAIKIMKKATL--GEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~-~~vavK~~~~~~~--~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      ++|++.+.||+|+||.||+|.+..++ ..||+|++.+...  ......+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus        30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv  109 (340)
T PTZ00426         30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV  109 (340)
T ss_pred             hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence            57999999999999999999876655 6899999875432  22345678899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          85 IEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |||+++|+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....    ..
T Consensus       110 ~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~----~~  185 (340)
T PTZ00426        110 LEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT----RT  185 (340)
T ss_pred             EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC----Cc
Confidence            99999999999999888999999999999999999999999999999999999999999999999999876532    22


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccc
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ  244 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~  244 (568)
                      .+.+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+.......+..+....+..+++.+.++|++||+
T Consensus       186 ~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~  264 (340)
T PTZ00426        186 YTLCGTPEYIAPEILLNVG-HGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKFLDNNCKHLMKKLLS  264 (340)
T ss_pred             ceecCChhhcCHHHHhCCC-CCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcc
Confidence            4567999999999998765 588999999999999999999999999888888999998888888899999999999999


Q ss_pred             cCcCCCC-----CHHHHhcCccccc
Q psy6203         245 VEPGKRI-----KIQDLLGHNWVKM  264 (568)
Q Consensus       245 ~dP~~Rp-----s~~ell~hp~~~~  264 (568)
                      .||.+|+     |++++++||||..
T Consensus       265 ~dp~~R~~~~~~~~~~~~~hp~f~~  289 (340)
T PTZ00426        265 HDLTKRYGNLKKGAQNVKEHPWFGN  289 (340)
T ss_pred             cCHHHcCCCCCCCHHHHHcCCCcCC
Confidence            9999995     8999999999974


No 36 
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00  E-value=1.6e-47  Score=388.46  Aligned_cols=247  Identities=29%  Similarity=0.586  Sum_probs=223.1

Q ss_pred             ecccCCeEEEEEEEcCCCcEEEEEEeecCCc--CCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCCCh
Q psy6203          16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGEL   93 (568)
Q Consensus        16 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g~L   93 (568)
                      ||+|+||.||+|++..+++.||+|++.+...  ......+.+|+.++++++||||+++++++.+.+..|+||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L   80 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL   80 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence            7999999999999999999999999976432  22345677899999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCCccc
Q psy6203          94 LDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNY  173 (568)
Q Consensus        94 ~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y  173 (568)
                      .+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... .......+||+.|
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt~~y  159 (312)
T cd05585          81 FHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD-DDKTNTFCGTPEY  159 (312)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccC-CCccccccCCccc
Confidence            999988889999999999999999999999999999999999999999999999999998754322 1223456799999


Q ss_pred             cccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCCC--
Q psy6203         174 AAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRI--  251 (568)
Q Consensus       174 ~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp--  251 (568)
                      +|||++.+.. ++.++|||||||++|+|++|..||.+.+..+....+..+....+..+++.+.++|.+||+.||.+||  
T Consensus       160 ~aPE~~~~~~-~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~~~  238 (312)
T cd05585         160 LAPELLLGHG-YTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDPTRRLGY  238 (312)
T ss_pred             CCHHHHcCCC-CCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCCHHHcCCC
Confidence            9999998766 5899999999999999999999999999889999999888888888999999999999999999997  


Q ss_pred             -CHHHHhcCccccc
Q psy6203         252 -KIQDLLGHNWVKM  264 (568)
Q Consensus       252 -s~~ell~hp~~~~  264 (568)
                       ++.|++.||||+.
T Consensus       239 ~~~~e~l~hp~~~~  252 (312)
T cd05585         239 NGAQEIKNHPFFSQ  252 (312)
T ss_pred             CCHHHHHcCCCcCC
Confidence             5899999999984


No 37 
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00  E-value=1.7e-47  Score=383.87  Aligned_cols=253  Identities=25%  Similarity=0.426  Sum_probs=214.7

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      ++|++.+.||+|+||.||+|++..++..||+|+++..........+.+|+.++++++||||+++++++.+.+..++||||
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~   84 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY   84 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence            57999999999999999999999999999999997654333445677899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          88 CPGGELLDHIVERQ-RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        88 ~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      +++ +|.+++...+ .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... ......
T Consensus        85 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~-~~~~~~  162 (288)
T cd07871          85 LDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVP-TKTYSN  162 (288)
T ss_pred             CCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCC-CccccC
Confidence            974 8998887644 5799999999999999999999999999999999999999999999999998754322 122334


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC-------------------CC-
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK-------------------YT-  226 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~-------------------~~-  226 (568)
                      ..|++.|+|||++.+...++.++||||+||++|+|++|++||.+.+..+....+....                   .. 
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (288)
T cd07871         163 EVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLF  242 (288)
T ss_pred             ceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhcccc
Confidence            5689999999998776557899999999999999999999998877665544432210                   00 


Q ss_pred             ----------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         227 ----------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       227 ----------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                                ..+.+++++.+||++||++||.+|||++|+++||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         243 PQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             CccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence                      012467889999999999999999999999999998


No 38 
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00  E-value=3.2e-47  Score=388.85  Aligned_cols=249  Identities=32%  Similarity=0.627  Sum_probs=223.8

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCC
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGG   91 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g   91 (568)
                      +.||+|+||.||+|++..+|+.||+|++.+....  .....+.+|+.+++.++||||+++++++...+.+|+||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g   80 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG   80 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence            4799999999999999999999999999865322  23456778999999999999999999999999999999999999


Q ss_pred             ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCCc
Q psy6203          92 ELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP  171 (568)
Q Consensus        92 ~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~  171 (568)
                      +|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... .......+||+
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~~~~gt~  159 (328)
T cd05593          81 ELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD-AATMKTFCGTP  159 (328)
T ss_pred             CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCc-ccccccccCCc
Confidence            99999988888999999999999999999999999999999999999999999999999998753322 12234567999


Q ss_pred             cccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCCC
Q psy6203         172 NYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRI  251 (568)
Q Consensus       172 ~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  251 (568)
                      .|+|||++.+.. ++.++|||||||++|+|++|..||...+..+....+..+....+..+++++.+||.+||+.||.+|+
T Consensus       160 ~y~aPE~~~~~~-~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~  238 (328)
T cd05593         160 EYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKDPNKRL  238 (328)
T ss_pred             CccChhhhcCCC-CCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcCCCHHHcC
Confidence            999999998766 5899999999999999999999999888888888888888888888999999999999999999997


Q ss_pred             -----CHHHHhcCccccc
Q psy6203         252 -----KIQDLLGHNWVKM  264 (568)
Q Consensus       252 -----s~~ell~hp~~~~  264 (568)
                           ++.|+++||||..
T Consensus       239 ~~~~~~~~~il~h~~~~~  256 (328)
T cd05593         239 GGGPDDAKEIMRHSFFTG  256 (328)
T ss_pred             CCCCCCHHHHhcCCCcCC
Confidence                 8999999999973


No 39 
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=100.00  E-value=3.3e-47  Score=381.47  Aligned_cols=254  Identities=25%  Similarity=0.387  Sum_probs=213.9

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      ++|++.+.||+|+||.||+|+++.+++.||+|++...... .....+.+|+.+++.++||||+++++++...+..|+|||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE   80 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence            5899999999999999999999999999999999765432 234567889999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          87 YCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        87 ~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      |++++.+..+......+++..++.++.||+.||.|||+.||+||||||+||+++.++.+||+|||++.............
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (287)
T cd07848          81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTE  160 (287)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccc
Confidence            99887776555455679999999999999999999999999999999999999999999999999987654332223344


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC--C-------------------C
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--K-------------------Y  225 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~--~-------------------~  225 (568)
                      ..||+.|+|||++.+.. ++.++|||||||++|+|++|++||.+.+..+....+...  .                   .
T Consensus       161 ~~~~~~y~aPE~~~~~~-~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (287)
T cd07848         161 YVATRWYRSPELLLGAP-YGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRF  239 (287)
T ss_pred             cccccccCCcHHHcCCC-CCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhccccc
Confidence            57899999999998776 588999999999999999999999876654332222110  0                   0


Q ss_pred             CC-----------CCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         226 TE-----------PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       226 ~~-----------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                      +.           ...+++++.+||++||++||++|||++|+|+||||
T Consensus       240 ~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         240 PAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             CcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            00           11267889999999999999999999999999998


No 40 
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00  E-value=7.4e-47  Score=387.16  Aligned_cols=256  Identities=30%  Similarity=0.586  Sum_probs=223.0

Q ss_pred             CeEEEeeecccCCeEEEEEEEc---CCCcEEEEEEeecCCcC---CchHHHHHHHHHHHhCC-CCCcceeeEEEEeCCEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHV---LTGEKVAIKIMKKATLG---EDLPRVKLEINALKHIS-HQHICKLFQVIETSSHI   81 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~---~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~~   81 (568)
                      +|++.+.||+|+||.||+|++.   .+++.||+|++.+....   .....+..|+.+++.++ ||||+++++++...+.+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            5899999999999999999864   47899999999764322   23456778999999995 89999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          82 FMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      |+||||+++|+|.+++..+..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus        81 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~  160 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEK  160 (332)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCC
Confidence            99999999999999998888999999999999999999999999999999999999999999999999999876543322


Q ss_pred             cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCC----CCHHHHHHHHHcCCCCCCCCCChHHHH
Q psy6203         162 SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS----DSIDQLYDKILNGKYTEPPWMSPNSRQ  237 (568)
Q Consensus       162 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~----~~~~~~~~~i~~~~~~~~~~~~~~~~~  237 (568)
                      ......+||+.|+|||++.+...++.++|||||||++|+|++|..||..    .....+...+.......+..+++.+.+
T Consensus       161 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (332)
T cd05614         161 ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQD  240 (332)
T ss_pred             CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHH
Confidence            3334567999999999998765568899999999999999999999964    234556666777777777789999999


Q ss_pred             HHHHccccCcCCCC-----CHHHHhcCccccc
Q psy6203         238 IVRSMLQVEPGKRI-----KIQDLLGHNWVKM  264 (568)
Q Consensus       238 li~~~L~~dP~~Rp-----s~~ell~hp~~~~  264 (568)
                      +|.+||+.||++||     +++++++||||+.
T Consensus       241 li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~  272 (332)
T cd05614         241 LLHKLLRKDPKKRLGAGPQGASEIKEHPFFKG  272 (332)
T ss_pred             HHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCC
Confidence            99999999999999     8899999999984


No 41 
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00  E-value=5.9e-47  Score=392.57  Aligned_cols=255  Identities=28%  Similarity=0.575  Sum_probs=220.2

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++.+.||+|+||+||+|.+..+++.||+|++.+....  .....+..|+.++..++||||+++++.+.+...+|+||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~   80 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM   80 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence            5799999999999999999999999999999999764322  23456788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc----
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE----  161 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~----  161 (568)
                      ||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......    
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~  160 (363)
T cd05628          81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFY  160 (363)
T ss_pred             cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccc
Confidence            9999999999999888999999999999999999999999999999999999999999999999999864321100    


Q ss_pred             ------------------------------cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCC
Q psy6203         162 ------------------------------SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSD  211 (568)
Q Consensus       162 ------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~  211 (568)
                                                    ......+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-~~~~~DvwSlGvil~ell~G~~Pf~~~  239 (363)
T cd05628         161 RNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTG-YNKLCDWWSLGVIMYEMLIGYPPFCSE  239 (363)
T ss_pred             ccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCC-CCCchhhhhhHHHHHHHHhCCCCCCCC
Confidence                                          0012457999999999998766 589999999999999999999999998


Q ss_pred             CHHHHHHHHHcCC--CCCCC--CCChHHHHHHHHccccCcC---CCCCHHHHhcCccccc
Q psy6203         212 SIDQLYDKILNGK--YTEPP--WMSPNSRQIVRSMLQVEPG---KRIKIQDLLGHNWVKM  264 (568)
Q Consensus       212 ~~~~~~~~i~~~~--~~~~~--~~~~~~~~li~~~L~~dP~---~Rps~~ell~hp~~~~  264 (568)
                      +..+....+....  ...++  .++++++++|.+|+. +|.   .||+++|+++||||+.
T Consensus       240 ~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~  298 (363)
T cd05628         240 TPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEG  298 (363)
T ss_pred             CHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCC
Confidence            8888888887643  33333  478999999999775 454   4589999999999984


No 42 
>KOG0604|consensus
Probab=100.00  E-value=2.2e-48  Score=362.77  Aligned_cols=251  Identities=35%  Similarity=0.687  Sum_probs=219.0

Q ss_pred             cccCeEEE-eeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEe----CC
Q psy6203           6 LRNQYILE-RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIET----SS   79 (568)
Q Consensus         6 ~~~~Y~i~-~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~----~~   79 (568)
                      +.++|.+. ++||-|-.|+|..|.++.||+++|+|++.      +.+..++|+++.-.. .|||||.++++|++    ..
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~------Ds~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rk  132 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLL------DSPKARREVELHWMASGHPHIVSIIDVYENSYQGRK  132 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHh------cCHHHHhHhhhhhhhcCCCceEEeehhhhhhccCce
Confidence            56778775 67999999999999999999999999985      334677888876555 59999999999864    35


Q ss_pred             EEEEEEeccCCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCC---CCeEEEeecCcc
Q psy6203          80 HIFMVIEYCPGGELLDHIVERQR--LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRN---QNLKLIDFGLCA  154 (568)
Q Consensus        80 ~~~lV~E~~~~g~L~~~i~~~~~--l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~---~~~kl~DFG~a~  154 (568)
                      .+.+|||.++||+|++.|.+++.  ++|.++..|++||..|+.|||+.+|.||||||+|+|...+   ..+||+|||+|+
T Consensus       133 cLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK  212 (400)
T KOG0604|consen  133 CLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAK  212 (400)
T ss_pred             eeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccccccc
Confidence            68899999999999999998765  9999999999999999999999999999999999999654   469999999998


Q ss_pred             CCCCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCC----HHHHHHHHHcCCCCCCC-
Q psy6203         155 KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYTEPP-  229 (568)
Q Consensus       155 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~----~~~~~~~i~~~~~~~~~-  229 (568)
                      .....  ..+.+.|-||.|.|||++.... |+..+|+||+||++|-|++|.+||.+..    ...+..+|..|.+.+|. 
T Consensus       213 ~t~~~--~~L~TPc~TPyYvaPevlg~eK-ydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~p  289 (400)
T KOG0604|consen  213 ETQEP--GDLMTPCFTPYYVAPEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEP  289 (400)
T ss_pred             ccCCC--ccccCCcccccccCHHHhCchh-cCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCCh
Confidence            76542  4567889999999999997666 6999999999999999999999997653    23567789999887764 


Q ss_pred             -C--CChHHHHHHHHccccCcCCCCCHHHHhcCcccccC
Q psy6203         230 -W--MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       230 -~--~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                       |  +|.+++++|+.+|..+|.+|.|++++++|||+...
T Consensus       290 EWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~  328 (400)
T KOG0604|consen  290 EWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQY  328 (400)
T ss_pred             hHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhccc
Confidence             3  89999999999999999999999999999999853


No 43 
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00  E-value=3.9e-47  Score=387.49  Aligned_cols=249  Identities=31%  Similarity=0.634  Sum_probs=223.4

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCC
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGG   91 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g   91 (568)
                      +.||+|+||.||+|++..+|..||+|++......  .....+.+|+.+++.++||||+++++++...+.+|+||||+++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG   80 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence            4799999999999999999999999999864321  23456678999999999999999999999999999999999999


Q ss_pred             ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCCc
Q psy6203          92 ELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP  171 (568)
Q Consensus        92 ~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~  171 (568)
                      +|..++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... .......+||+
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~gt~  159 (323)
T cd05595          81 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATMKTFCGTP  159 (323)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC-CCccccccCCc
Confidence            99999988888999999999999999999999999999999999999999999999999998753221 12234457999


Q ss_pred             cccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCCC
Q psy6203         172 NYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRI  251 (568)
Q Consensus       172 ~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp  251 (568)
                      .|+|||++.+.. ++.++|||||||++|+|++|..||...+.......+.......+..+++++.++|.+||+.||.+|+
T Consensus       160 ~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~  238 (323)
T cd05595         160 EYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRL  238 (323)
T ss_pred             CcCCcccccCCC-CCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHHHhC
Confidence            999999998766 5899999999999999999999999988888888888888888888999999999999999999998


Q ss_pred             -----CHHHHhcCccccc
Q psy6203         252 -----KIQDLLGHNWVKM  264 (568)
Q Consensus       252 -----s~~ell~hp~~~~  264 (568)
                           ++.++++||||..
T Consensus       239 ~~~~~~~~~~l~h~~~~~  256 (323)
T cd05595         239 GGGPSDAKEVMEHRFFLS  256 (323)
T ss_pred             CCCCCCHHHHHcCCCcCC
Confidence                 8999999999974


No 44 
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00  E-value=5.7e-47  Score=385.76  Aligned_cols=249  Identities=35%  Similarity=0.679  Sum_probs=222.9

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCc--CCchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHI-SHQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      +.||+|+||+||+|+++.+++.||+|++.+...  ......+..|..++..+ +||||+++++++.+.+.+|+||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~   80 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG   80 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence            479999999999999999999999999976432  22345667788888876 699999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCC
Q psy6203          91 GELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS  170 (568)
Q Consensus        91 g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt  170 (568)
                      |+|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... .......+||
T Consensus        81 g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~-~~~~~~~~gt  159 (320)
T cd05590          81 GDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFN-GKTTSTFCGT  159 (320)
T ss_pred             chHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcC-CCcccccccC
Confidence            999999988889999999999999999999999999999999999999999999999999998753222 1223456799


Q ss_pred             ccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCC
Q psy6203         171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKR  250 (568)
Q Consensus       171 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  250 (568)
                      +.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+..++...+..+....+..+++++.++|++||+.||.+|
T Consensus       160 ~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  238 (320)
T cd05590         160 PDYIAPEILQEML-YGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFMTKNPTMR  238 (320)
T ss_pred             ccccCHHHHcCCC-CCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCHHHC
Confidence            9999999998765 588999999999999999999999999999999999998888888999999999999999999999


Q ss_pred             CCH------HHHhcCccccc
Q psy6203         251 IKI------QDLLGHNWVKM  264 (568)
Q Consensus       251 ps~------~ell~hp~~~~  264 (568)
                      |++      ++++.||||+.
T Consensus       239 ~~~~~~~~~~~~~~h~~f~~  258 (320)
T cd05590         239 LGSLTLGGEEAILRHPFFKE  258 (320)
T ss_pred             CCCCCCCCHHHHHcCCCcCC
Confidence            998      99999999974


No 45 
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00  E-value=7.3e-47  Score=392.25  Aligned_cols=255  Identities=31%  Similarity=0.637  Sum_probs=221.7

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++.+.||+|+||+||+|++..+|+.||||++.+....  .....+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM   80 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence            5799999999999999999999999999999999864322  23456778999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc---
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES---  162 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~---  162 (568)
                      ||++||+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.........   
T Consensus        81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~  160 (364)
T cd05599          81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFY  160 (364)
T ss_pred             CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccc
Confidence            99999999999988889999999999999999999999999999999999999999999999999998643211000   


Q ss_pred             ----------------------------------ccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCC
Q psy6203         163 ----------------------------------QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF  208 (568)
Q Consensus       163 ----------------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf  208 (568)
                                                        ...+.+||+.|+|||++.+.. ++.++|||||||++|+|++|..||
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~el~~G~~Pf  239 (364)
T cd05599         161 RILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTG-YNKECDWWSLGVIMYEMLVGYPPF  239 (364)
T ss_pred             ccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCC-CCCeeeeecchhHHHHhhcCCCCC
Confidence                                              111346999999999998766 589999999999999999999999


Q ss_pred             CCCCHHHHHHHHHcCCC--CCCC--CCChHHHHHHHHccccCcCCCCC---HHHHhcCccccc
Q psy6203         209 DSDSIDQLYDKILNGKY--TEPP--WMSPNSRQIVRSMLQVEPGKRIK---IQDLLGHNWVKM  264 (568)
Q Consensus       209 ~~~~~~~~~~~i~~~~~--~~~~--~~~~~~~~li~~~L~~dP~~Rps---~~ell~hp~~~~  264 (568)
                      ...+..+....+.....  ..+.  .+++++.+||.+||. +|.+|++   ++|++.||||+.
T Consensus       240 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~  301 (364)
T cd05599         240 CSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKG  301 (364)
T ss_pred             CCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCC
Confidence            99888877777765432  2222  468999999999997 9999998   999999999974


No 46 
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. 
Probab=100.00  E-value=9.1e-47  Score=386.64  Aligned_cols=252  Identities=33%  Similarity=0.595  Sum_probs=223.7

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++.+.||+|+||.||+|++..+++.||+|++.+....  .....+..|+.+++.++||||+++++++...+..|+||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~   80 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM   80 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence            5799999999999999999999999999999999865332  23456788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      ||++||+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....    ...
T Consensus        81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~----~~~  156 (333)
T cd05600          81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT----YAN  156 (333)
T ss_pred             eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc----ccC
Confidence            9999999999998888999999999999999999999999999999999999999999999999999876433    234


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--CCCC------CCChHHHH
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY--TEPP------WMSPNSRQ  237 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~--~~~~------~~~~~~~~  237 (568)
                      ..+||+.|+|||++.+.. ++.++|||||||++|+|++|..||...+..+....+.....  ..+.      .+++++.+
T Consensus       157 ~~~gt~~y~aPE~~~~~~-~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~  235 (333)
T cd05600         157 SVVGSPDYMAPEVLRGKG-YDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWD  235 (333)
T ss_pred             CcccCccccChhHhcCCC-CCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHH
Confidence            567999999999998775 68999999999999999999999999888877776654321  1121      35899999


Q ss_pred             HHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         238 IVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       238 li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      ||.+||..+|.+||++++++.||||..
T Consensus       236 li~~~l~~~~~rr~s~~~ll~h~~~~~  262 (333)
T cd05600         236 LITKLINDPSRRFGSLEDIKNHPFFKE  262 (333)
T ss_pred             HHHHHhhChhhhcCCHHHHHhCcccCC
Confidence            999999999999999999999999984


No 47 
>KOG0594|consensus
Probab=100.00  E-value=3.1e-47  Score=367.44  Aligned_cols=257  Identities=30%  Similarity=0.468  Sum_probs=219.5

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC-chHHHHHHHHHHHhCCCCC-cceeeEEEEeCC------
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQH-ICKLFQVIETSS------   79 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpn-Iv~l~~~~~~~~------   79 (568)
                      ..|..+++||+|+||+||+|+++.+|+.||+|.+......+ .-....+|+.+|+.|+|+| |+++++++.+.+      
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~   90 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG   90 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence            34777888999999999999999999999999998665432 2345688999999999999 999999998877      


Q ss_pred             EEEEEEeccCCCChHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccC
Q psy6203          80 HIFMVIEYCPGGELLDHIVERQ----RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAK  155 (568)
Q Consensus        80 ~~~lV~E~~~~g~L~~~i~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~  155 (568)
                      .+++|+||+ ..+|..++....    .++...++.+++||+.||+|||+++|+||||||+|||++++|.+||+|||+|+.
T Consensus        91 ~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra  169 (323)
T KOG0594|consen   91 KLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARA  169 (323)
T ss_pred             eEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHH
Confidence            899999999 568999997654    577889999999999999999999999999999999999999999999999986


Q ss_pred             CCCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc--CCC--------
Q psy6203         156 PEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN--GKY--------  225 (568)
Q Consensus       156 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~--~~~--------  225 (568)
                      ..-.. ......++|.+|.|||++.|...|+...||||+|||++||+++++.|.+.+..+....|..  |.+        
T Consensus       170 ~~ip~-~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v  248 (323)
T KOG0594|consen  170 FSIPM-RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGV  248 (323)
T ss_pred             hcCCc-ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCc
Confidence            55332 2345667899999999999998899999999999999999999999999887766666543  111        


Q ss_pred             --------CCC------------CCCChHHHHHHHHccccCcCCCCCHHHHhcCcccccCC
Q psy6203         226 --------TEP------------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGP  266 (568)
Q Consensus       226 --------~~~------------~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  266 (568)
                              .++            +..+++..+++.+||+++|.+|.|+..+|.||||...+
T Consensus       249 ~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~  309 (323)
T KOG0594|consen  249 SSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELP  309 (323)
T ss_pred             cccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcccc
Confidence                    111            11345889999999999999999999999999998543


No 48 
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00  E-value=6.3e-47  Score=382.59  Aligned_cols=256  Identities=25%  Similarity=0.419  Sum_probs=212.1

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      .++|++.+.||+|+||.||+|++..+++.||+|++...........+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   83 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE   83 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence            47899999999999999999999999999999999765443334467789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          87 YCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        87 ~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      |+. ++|.+++... +.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... .....
T Consensus        84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~  161 (303)
T cd07869          84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVP-SHTYS  161 (303)
T ss_pred             CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCC-CccCC
Confidence            995 6788877654 56899999999999999999999999999999999999999999999999998654322 12234


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCC-HHHHHHHHHc--CCCC----------------
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKILN--GKYT----------------  226 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~-~~~~~~~i~~--~~~~----------------  226 (568)
                      ..+||+.|+|||++.+...++.++|||||||++|+|++|..||.+.. .......+..  +...                
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (303)
T cd07869         162 NEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPE  241 (303)
T ss_pred             CCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccc
Confidence            45689999999998776657889999999999999999999997643 2222222211  0000                


Q ss_pred             -----CC---------CCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         227 -----EP---------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       227 -----~~---------~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                           .+         ...++.+.+||.+||+.||.+|||+.|+++||||+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~  293 (303)
T cd07869         242 RFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSD  293 (303)
T ss_pred             cccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCccccc
Confidence                 00         013567899999999999999999999999999984


No 49 
>KOG0610|consensus
Probab=100.00  E-value=2.5e-47  Score=370.89  Aligned_cols=258  Identities=30%  Similarity=0.529  Sum_probs=227.9

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      +.|++++.||.|.-|+||+|+.+.++..+|+|++.+.....  ...+.+.|.+||+.++||.++.+|..|+.++..|+||
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m  156 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM  156 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence            35788899999999999999999999999999999876643  3456777999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCC-----
Q psy6203          86 EYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEG-----  158 (568)
Q Consensus        86 E~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~-----  158 (568)
                      |||+||+|..+..++  +.+++..++-++..++-||+|||-.|||.|||||+|||+.++|+|.|+||.++.....     
T Consensus       157 eyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~  236 (459)
T KOG0610|consen  157 EYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLV  236 (459)
T ss_pred             ecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeee
Confidence            999999999888764  5799999999999999999999999999999999999999999999999998632110     


Q ss_pred             ----------------------------C-C---------------------ccccccccCCccccccccccCcccCCcc
Q psy6203         159 ----------------------------G-L---------------------ESQLQTSCGSPNYAAPEVIKGKQYYGSE  188 (568)
Q Consensus       159 ----------------------------~-~---------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~  188 (568)
                                                  . .                     ....+.++||-.|+|||++.|.. .+.+
T Consensus       237 ~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G-HgsA  315 (459)
T KOG0610|consen  237 KSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG-HGSA  315 (459)
T ss_pred             ccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC-CCch
Confidence                                        0 0                     01123357999999999999987 4899


Q ss_pred             cceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC--CCChHHHHHHHHccccCcCCCCC----HHHHhcCccc
Q psy6203         189 TDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP--WMSPNSRQIVRSMLQVEPGKRIK----IQDLLGHNWV  262 (568)
Q Consensus       189 ~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~li~~~L~~dP~~Rps----~~ell~hp~~  262 (568)
                      +|.|+|||.+|||+.|..||.+.+..+.+.+|......+|.  .++..++|||+++|.+||.+|..    |.||.+||||
T Consensus       316 VDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF  395 (459)
T KOG0610|consen  316 VDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFF  395 (459)
T ss_pred             hhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccc
Confidence            99999999999999999999999999999999988766554  57899999999999999999998    9999999999


Q ss_pred             ccCC
Q psy6203         263 KMGP  266 (568)
Q Consensus       263 ~~~~  266 (568)
                      +...
T Consensus       396 ~gVn  399 (459)
T KOG0610|consen  396 EGVN  399 (459)
T ss_pred             cCCC
Confidence            8543


No 50 
>KOG0201|consensus
Probab=100.00  E-value=3.7e-49  Score=386.47  Aligned_cols=260  Identities=28%  Similarity=0.456  Sum_probs=231.5

Q ss_pred             ccccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEE
Q psy6203           3 YIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIF   82 (568)
Q Consensus         3 ~~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   82 (568)
                      ..+....|+..+.||+|+||.||+|.+..+++.||+|++.........+.++.|+.+|.+++++||.++|+.+..+..++
T Consensus         8 ~~~~~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~Lw   87 (467)
T KOG0201|consen    8 KIDPELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLW   87 (467)
T ss_pred             cCCcccccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHH
Confidence            34556789999999999999999999999999999999998877777888999999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc
Q psy6203          83 MVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES  162 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  162 (568)
                      ++||||.||++.+.+.....+.|.++..++++++.||.|||+.+.+|||||+.|||+..+|.+||+|||++........ 
T Consensus        88 iiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~-  166 (467)
T KOG0201|consen   88 IIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK-  166 (467)
T ss_pred             HHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhh-
Confidence            9999999999999998877789999999999999999999999999999999999999999999999999987665433 


Q ss_pred             ccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-CCCCCChHHHHHHHH
Q psy6203         163 QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNSRQIVRS  241 (568)
Q Consensus       163 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~li~~  241 (568)
                      ...+.+|||.|||||++.+.. |+.++||||||++.+||++|.+|+....+..+.-.|-+..++ .....++.+++||..
T Consensus       167 rr~tfvGTPfwMAPEVI~~~~-Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~  245 (467)
T KOG0201|consen  167 RRKTFVGTPFWMAPEVIKQSG-YDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEA  245 (467)
T ss_pred             ccccccccccccchhhhcccc-ccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccCHHHHHHHHH
Confidence            337889999999999999655 699999999999999999999999876664443334333332 233588999999999


Q ss_pred             ccccCcCCCCCHHHHhcCccccc
Q psy6203         242 MLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       242 ~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      ||++||+.||||.++|.|+|++.
T Consensus       246 CL~k~P~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  246 CLDKNPEFRPSAKELLKHKFIKR  268 (467)
T ss_pred             HhhcCcccCcCHHHHhhhHHHHh
Confidence            99999999999999999999994


No 51 
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00  E-value=1.3e-46  Score=384.05  Aligned_cols=254  Identities=32%  Similarity=0.589  Sum_probs=226.8

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCc--CCchHHHHHHHHHHHhCCC-CCcceeeEEEEeCCEEEEEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISH-QHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~Ei~~l~~l~h-pnIv~l~~~~~~~~~~~lV~   85 (568)
                      +|++.+.||+|+||.||+|.+..+++.||+|++.+...  ......+..|+.++..++| ++|+++++++.+.+.+|+||
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM   80 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence            58999999999999999999999999999999986432  2334567789999999976 46888999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      ||++||+|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... .....
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~-~~~~~  159 (324)
T cd05587          81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFG-GKTTR  159 (324)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCC-CCcee
Confidence            99999999999988888999999999999999999999999999999999999999999999999998643221 12234


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHcccc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV  245 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~  245 (568)
                      ..+||+.|+|||++.+.. ++.++||||+||++|+|++|+.||.+.+..+....+.......+..+++++.+++.+||..
T Consensus       160 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~  238 (324)
T cd05587         160 TFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLLTK  238 (324)
T ss_pred             eecCCccccChhhhcCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhc
Confidence            567999999999998776 5889999999999999999999999999889999998888888888999999999999999


Q ss_pred             CcCCCCCH-----HHHhcCccccc
Q psy6203         246 EPGKRIKI-----QDLLGHNWVKM  264 (568)
Q Consensus       246 dP~~Rps~-----~ell~hp~~~~  264 (568)
                      ||.+|+++     +++++||||+.
T Consensus       239 ~P~~R~~~~~~~~~~~~~hp~~~~  262 (324)
T cd05587         239 HPAKRLGCGPTGERDIREHAFFRR  262 (324)
T ss_pred             CHHHcCCCCCCCHHHHhcCCCcCC
Confidence            99999986     89999999974


No 52 
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00  E-value=1.1e-46  Score=383.90  Aligned_cols=249  Identities=33%  Similarity=0.614  Sum_probs=223.0

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCc--CCchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHI-SHQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      +.||+|+||.||+|++..+++.||+|++.+...  ......+..|..++..+ +||||+++++++.+.+.+|+||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   80 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG   80 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence            469999999999999999999999999986432  22344567788888866 799999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCC
Q psy6203          91 GELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS  170 (568)
Q Consensus        91 g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt  170 (568)
                      |+|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... .......+||
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~gt  159 (321)
T cd05591          81 GDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN-GVTTTTFCGT  159 (321)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccC-CccccccccC
Confidence            999999988889999999999999999999999999999999999999999999999999998753322 1223455799


Q ss_pred             ccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCC
Q psy6203         171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKR  250 (568)
Q Consensus       171 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  250 (568)
                      +.|+|||++.+.. ++.++|||||||++|+|++|..||...+.....+.+..+....+..+++++.++|.+||+.||++|
T Consensus       160 ~~y~aPE~~~~~~-~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dp~~R  238 (321)
T cd05591         160 PDYIAPEILQELE-YGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTKNPNKR  238 (321)
T ss_pred             ccccCHHHHcCCC-CCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHHc
Confidence            9999999998766 589999999999999999999999999999999999998888888899999999999999999999


Q ss_pred             C-------CHHHHhcCccccc
Q psy6203         251 I-------KIQDLLGHNWVKM  264 (568)
Q Consensus       251 p-------s~~ell~hp~~~~  264 (568)
                      +       +++++++||||..
T Consensus       239 ~~~~~~~~~~~~~~~hp~~~~  259 (321)
T cd05591         239 LGCVASQGGEDAIKQHPFFKE  259 (321)
T ss_pred             CCCCCCCCCHHHHhcCCccCC
Confidence            9       9999999999963


No 53 
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00  E-value=1.4e-46  Score=376.66  Aligned_cols=253  Identities=24%  Similarity=0.413  Sum_probs=218.3

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      .|++.+.||+|+||+||+|.+..+|+.||+|.+.+....  .....+.+|+.++++++|+||+++++++.+.+..++|||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence            488999999999999999999999999999998765432  223456789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          87 YCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        87 ~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |+++|+|.+.+...  ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++......  ...
T Consensus        81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~--~~~  158 (285)
T cd05631          81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEG--ETV  158 (285)
T ss_pred             ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC--Cee
Confidence            99999999887643  46899999999999999999999999999999999999999999999999998764332  122


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCH----HHHHHHHHcCCCCCCCCCChHHHHHHH
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSI----DQLYDKILNGKYTEPPWMSPNSRQIVR  240 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~li~  240 (568)
                      ....||+.|+|||++.+.. ++.++|||||||++|+|++|+.||...+.    ..+...+.......+..+++++.+||+
T Consensus       159 ~~~~g~~~y~aPE~~~~~~-~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~  237 (285)
T cd05631         159 RGRVGTVGYMAPEVINNEK-YTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICR  237 (285)
T ss_pred             cCCCCCCCccCHhhhcCCC-CCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHH
Confidence            3457899999999998766 58999999999999999999999987543    233444445555566778999999999


Q ss_pred             HccccCcCCCCC-----HHHHhcCccccc
Q psy6203         241 SMLQVEPGKRIK-----IQDLLGHNWVKM  264 (568)
Q Consensus       241 ~~L~~dP~~Rps-----~~ell~hp~~~~  264 (568)
                      +||+.||.+||+     ++++++||||..
T Consensus       238 ~~l~~~P~~R~~~~~~~~~~~~~h~~~~~  266 (285)
T cd05631         238 MLLTKNPKERLGCRGNGAAGVKQHPIFKN  266 (285)
T ss_pred             HHhhcCHHHhcCCCCCCHHHHhcCHhhcC
Confidence            999999999997     899999999984


No 54 
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00  E-value=1.8e-46  Score=389.37  Aligned_cols=256  Identities=32%  Similarity=0.594  Sum_probs=222.8

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++.+.||+|+||.||+|++..+++.||+|++.+....  .....+..|+.+++.++||||+++++++.+.+.+|+||
T Consensus        43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv~  122 (370)
T cd05596          43 EDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMVM  122 (370)
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEE
Confidence            6799999999999999999999999999999999754322  23345778999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      ||++||+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++............
T Consensus       123 Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~  201 (370)
T cd05596         123 EYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCD  201 (370)
T ss_pred             cCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCC
Confidence            99999999998865 46899999999999999999999999999999999999999999999999998765433222334


Q ss_pred             cccCCccccccccccCcc---cCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CCCCC--CCChHHHHH
Q psy6203         166 TSCGSPNYAAPEVIKGKQ---YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK--YTEPP--WMSPNSRQI  238 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~---~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~--~~~~~--~~~~~~~~l  238 (568)
                      ..+||+.|+|||++.+..   .++.++|||||||++|+|++|..||.+.+....+..+....  ...+.  .++.++++|
T Consensus       202 ~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~l  281 (370)
T cd05596         202 TAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDL  281 (370)
T ss_pred             CCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHH
Confidence            567999999999986532   36889999999999999999999999988888888887643  23333  579999999


Q ss_pred             HHHccccCcCC--CCCHHHHhcCccccc
Q psy6203         239 VRSMLQVEPGK--RIKIQDLLGHNWVKM  264 (568)
Q Consensus       239 i~~~L~~dP~~--Rps~~ell~hp~~~~  264 (568)
                      |.+||+.+|.+  |+|++|+++||||+.
T Consensus       282 i~~~L~~~p~r~~R~s~~ell~h~~~~~  309 (370)
T cd05596         282 ICAFLTDREVRLGRNGVDEIKSHPFFKN  309 (370)
T ss_pred             HHHHccChhhccCCCCHHHHhcCcccCC
Confidence            99999999988  999999999999985


No 55 
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00  E-value=7.4e-47  Score=385.94  Aligned_cols=249  Identities=32%  Similarity=0.635  Sum_probs=223.0

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCC
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGG   91 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g   91 (568)
                      +.||+|+||.||+|.+..+|+.||+|++.+....  .....+..|+.+++.++||||+++++++...+.+|+||||+++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~   80 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG   80 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence            4799999999999999999999999999865332  23456678999999999999999999999999999999999999


Q ss_pred             ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCC
Q psy6203          92 ELLDHIVERQRLGEKESRAFFRQILSAVAYLHH-LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS  170 (568)
Q Consensus        92 ~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt  170 (568)
                      +|..++.....+++..+..++.||+.||.|||+ .||+||||||+|||++.++.+||+|||++...... .......+||
T Consensus        81 ~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~gt  159 (325)
T cd05594          81 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD-GATMKTFCGT  159 (325)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC-CcccccccCC
Confidence            999999888889999999999999999999997 79999999999999999999999999998753321 1223455799


Q ss_pred             ccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCC
Q psy6203         171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKR  250 (568)
Q Consensus       171 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  250 (568)
                      +.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+.......+.......+..+++++.+||.+||+.||.+|
T Consensus       160 ~~y~aPE~~~~~~-~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R  238 (325)
T cd05594         160 PEYLAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKKDPKQR  238 (325)
T ss_pred             cccCCHHHHccCC-CCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhhcCHHHh
Confidence            9999999998766 589999999999999999999999998888888888888888888899999999999999999999


Q ss_pred             C-----CHHHHhcCccccc
Q psy6203         251 I-----KIQDLLGHNWVKM  264 (568)
Q Consensus       251 p-----s~~ell~hp~~~~  264 (568)
                      +     ++.++++||||..
T Consensus       239 ~~~~~~~~~~il~h~~~~~  257 (325)
T cd05594         239 LGGGPDDAKEIMQHKFFAG  257 (325)
T ss_pred             CCCCCCCHHHHhcCCCcCC
Confidence            7     9999999999984


No 56 
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the 
Probab=100.00  E-value=1.1e-46  Score=388.70  Aligned_cols=255  Identities=33%  Similarity=0.706  Sum_probs=224.9

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++.+.||+|+||+||+|++..+|+.||+|++.+....  .....+..|+.++..++||||+++++++.+.+..|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM   80 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence            5799999999999999999999999999999999865332  33456788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC-----
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL-----  160 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-----  160 (568)
                      ||+++++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......     
T Consensus        81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~  160 (350)
T cd05573          81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYY  160 (350)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccc
Confidence            999999999999888899999999999999999999999999999999999999999999999999987654322     


Q ss_pred             -----------------------ccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHH
Q psy6203         161 -----------------------ESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLY  217 (568)
Q Consensus       161 -----------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~  217 (568)
                                             ........||+.|+|||++.+.. ++.++|||||||++|+|++|..||...+.....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~  239 (350)
T cd05573         161 LNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTP-YGLECDWWSLGVILYEMLYGFPPFYSDTLQETY  239 (350)
T ss_pred             ccccccccccccccccccccccccccccccccCccccCHHHHcCCC-CCCceeeEecchhhhhhccCCCCCCCCCHHHHH
Confidence                                   11223456999999999998875 589999999999999999999999988887777


Q ss_pred             HHHHc--CCCCCCC--CCChHHHHHHHHccccCcCCCCC-HHHHhcCccccc
Q psy6203         218 DKILN--GKYTEPP--WMSPNSRQIVRSMLQVEPGKRIK-IQDLLGHNWVKM  264 (568)
Q Consensus       218 ~~i~~--~~~~~~~--~~~~~~~~li~~~L~~dP~~Rps-~~ell~hp~~~~  264 (568)
                      ..+..  .....+.  .+++++.+||.+||. ||.+|++ ++++++||||+.
T Consensus       240 ~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~  290 (350)
T cd05573         240 NKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKG  290 (350)
T ss_pred             HHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCC
Confidence            77766  3333333  369999999999998 9999999 999999999974


No 57 
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00  E-value=1.4e-46  Score=382.19  Aligned_cols=249  Identities=33%  Similarity=0.656  Sum_probs=221.2

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCc--CCchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHI-SHQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      +.||+|+||.||+|+++.+|+.||+|++++...  .........|..++..+ +||||+++++++.+.+.+|+||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~   80 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence            479999999999999999999999999986432  23345566788887754 899999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCC
Q psy6203          91 GELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS  170 (568)
Q Consensus        91 g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt  170 (568)
                      |+|..++..+..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... .......+||
T Consensus        81 g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt  159 (316)
T cd05620          81 GDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG-DNRASTFCGT  159 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccC-CCceeccCCC
Confidence            999999988888999999999999999999999999999999999999999999999999998643221 1233456799


Q ss_pred             ccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCC
Q psy6203         171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKR  250 (568)
Q Consensus       171 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  250 (568)
                      +.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+..++.+.+..+....+.+++++++++|.+||+.||++|
T Consensus       160 ~~y~aPE~~~~~~-~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R  238 (316)
T cd05620         160 PDYIAPEILQGLK-YTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFERDPTRR  238 (316)
T ss_pred             cCccCHHHHcCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHccCCHHHc
Confidence            9999999998776 589999999999999999999999999988888888888887888899999999999999999999


Q ss_pred             CCH-HHHhcCccccc
Q psy6203         251 IKI-QDLLGHNWVKM  264 (568)
Q Consensus       251 ps~-~ell~hp~~~~  264 (568)
                      |++ +++++||||+.
T Consensus       239 ~~~~~~~~~h~~f~~  253 (316)
T cd05620         239 LGVVGNIRGHPFFKT  253 (316)
T ss_pred             CCChHHHHcCCCcCC
Confidence            998 58999999974


No 58 
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00  E-value=2.3e-46  Score=381.89  Aligned_cols=250  Identities=34%  Similarity=0.637  Sum_probs=222.9

Q ss_pred             EeeecccCCeEEEEEEEc---CCCcEEEEEEeecCCcC---CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203          13 ERTVGSGGFAKVKLATHV---LTGEKVAIKIMKKATLG---EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus        13 ~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~---~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      ++.||+|+||.||+|++.   .+++.||+|++.+....   .....+..|+.+++.++||||+++++++..++.+|+|||
T Consensus         1 ~~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e   80 (323)
T cd05584           1 LKVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE   80 (323)
T ss_pred             CceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence            368999999999999864   47889999999864321   223456789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          87 YCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        87 ~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      |+++++|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... ......
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~  159 (323)
T cd05584          81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHE-GTVTHT  159 (323)
T ss_pred             CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccC-CCcccc
Confidence            9999999999988888999999999999999999999999999999999999999999999999998753322 122344


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccC
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVE  246 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~d  246 (568)
                      .+||+.|+|||++.+.. ++.++|||||||++|+|++|..||...+.......+..+....++.+++.+.++|.+||+.|
T Consensus       160 ~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  238 (323)
T cd05584         160 FCGTIEYMAPEILMRSG-HGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKLLKRN  238 (323)
T ss_pred             cCCCccccChhhccCCC-CCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcccC
Confidence            57999999999998766 58899999999999999999999999988888889988888888899999999999999999


Q ss_pred             cCCCC-----CHHHHhcCccccc
Q psy6203         247 PGKRI-----KIQDLLGHNWVKM  264 (568)
Q Consensus       247 P~~Rp-----s~~ell~hp~~~~  264 (568)
                      |++||     ++++++.||||+.
T Consensus       239 p~~R~~~~~~~~~~l~~h~~~~~  261 (323)
T cd05584         239 PSSRLGAGPGDAAEVQSHPFFRH  261 (323)
T ss_pred             HhHcCCCCCCCHHHHhcCCCcCC
Confidence            99999     8999999999974


No 59 
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved 
Probab=100.00  E-value=2e-46  Score=382.60  Aligned_cols=252  Identities=31%  Similarity=0.571  Sum_probs=222.5

Q ss_pred             eEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHH---HhCCCCCcceeeEEEEeCCEEEEE
Q psy6203          10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINAL---KHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus        10 Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l---~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      |++.+.||+|+||.||+|.+..+|+.||+|++++....  .....+.+|+.++   +.++||||+++++++.+.+..|+|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv   80 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV   80 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence            78999999999999999999999999999999865321  2344566676655   567899999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          85 IEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |||++|++|...+.. +.+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++...... ....
T Consensus        81 ~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~-~~~~  158 (324)
T cd05589          81 MEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF-GDRT  158 (324)
T ss_pred             EcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC-CCcc
Confidence            999999999888754 57999999999999999999999999999999999999999999999999998653322 2233


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccc
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ  244 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~  244 (568)
                      ...+|++.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+..+....+..+....+..+++.+.++|.+||+
T Consensus       159 ~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~  237 (324)
T cd05589         159 STFCGTPEFLAPEVLTETS-YTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSREAISIMRRLLR  237 (324)
T ss_pred             cccccCccccCHhHhcCCC-CCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhh
Confidence            4567999999999998766 588999999999999999999999999988888889888888888899999999999999


Q ss_pred             cCcCCCC-----CHHHHhcCccccc
Q psy6203         245 VEPGKRI-----KIQDLLGHNWVKM  264 (568)
Q Consensus       245 ~dP~~Rp-----s~~ell~hp~~~~  264 (568)
                      .||.+||     ++.++++||||+.
T Consensus       238 ~dP~~R~~~~~~~~~~l~~~~~f~~  262 (324)
T cd05589         238 RNPERRLGSGEKDAEDVKKQPFFRD  262 (324)
T ss_pred             cCHhHcCCCCCCCHHHHhhCCCcCC
Confidence            9999999     7999999999974


No 60 
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00  E-value=2.5e-46  Score=390.72  Aligned_cols=255  Identities=28%  Similarity=0.552  Sum_probs=218.9

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCc--CCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|+++++||+|+||+||+|++..+++.||+|++.+...  ......+.+|+.++++++||||+++++.+.+.+.+|+||
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~   80 (382)
T cd05625           1 SMFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM   80 (382)
T ss_pred             CCcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence            469999999999999999999999999999999976432  123456788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC-----
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL-----  160 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-----  160 (568)
                      |||++|+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.......     
T Consensus        81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~  160 (382)
T cd05625          81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY  160 (382)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccc
Confidence            999999999999888889999999999999999999999999999999999999999999999999975321000     


Q ss_pred             -----------------------------------------ccccccccCCccccccccccCcccCCcccceechhhHHH
Q psy6203         161 -----------------------------------------ESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLY  199 (568)
Q Consensus       161 -----------------------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~  199 (568)
                                                               .....+.+||+.|+|||++.+.. ++.++|||||||++|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~DiwSlGvil~  239 (382)
T cd05625         161 QSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILY  239 (382)
T ss_pred             ccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCC-CCCeeeEEechHHHH
Confidence                                                     00112347999999999998776 589999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCC--CCC--CCCCChHHHHHHHHccccCcCCCCC---HHHHhcCccccc
Q psy6203         200 ALLCGFLPFDSDSIDQLYDKILNGK--YTE--PPWMSPNSRQIVRSMLQVEPGKRIK---IQDLLGHNWVKM  264 (568)
Q Consensus       200 ~lltG~~pf~~~~~~~~~~~i~~~~--~~~--~~~~~~~~~~li~~~L~~dP~~Rps---~~ell~hp~~~~  264 (568)
                      +|++|.+||.+.+..+....+....  ...  ...+++++.++|.+|+ .+|.+|++   ++++++||||+.
T Consensus       240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~  310 (382)
T cd05625         240 EMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKT  310 (382)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCC
Confidence            9999999999888776666665532  222  3457999999999987 49999997   999999999974


No 61 
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=100.00  E-value=1.8e-46  Score=390.98  Aligned_cols=255  Identities=27%  Similarity=0.581  Sum_probs=218.8

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCc--CCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++.+.||+|+||+||+|.+..+|+.||+|++.+...  ......+.+|+.++++++||||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~   80 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM   80 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence            579999999999999999999999999999999875432  123456788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc----
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE----  161 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~----  161 (568)
                      ||++||+|.+++...+.+++..++.++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.......    
T Consensus        81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~  160 (377)
T cd05629          81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYY  160 (377)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence            9999999999998888999999999999999999999999999999999999999999999999999853211000    


Q ss_pred             --------c----------------------------------ccccccCCccccccccccCcccCCcccceechhhHHH
Q psy6203         162 --------S----------------------------------QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLY  199 (568)
Q Consensus       162 --------~----------------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~  199 (568)
                              .                                  .....+||+.|+|||++.+.. ++.++|||||||++|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~  239 (377)
T cd05629         161 QKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQG-YGQECDWWSLGAIMF  239 (377)
T ss_pred             cccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCC-CCCceeeEecchhhh
Confidence                    0                                  001246999999999998766 589999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcCC--CCCCC--CCChHHHHHHHHccccCcCCC---CCHHHHhcCccccc
Q psy6203         200 ALLCGFLPFDSDSIDQLYDKILNGK--YTEPP--WMSPNSRQIVRSMLQVEPGKR---IKIQDLLGHNWVKM  264 (568)
Q Consensus       200 ~lltG~~pf~~~~~~~~~~~i~~~~--~~~~~--~~~~~~~~li~~~L~~dP~~R---ps~~ell~hp~~~~  264 (568)
                      +|++|.+||.+.+..+.+..+....  ...+.  .+++++++||.+||. +|.+|   +|+.|++.||||+.
T Consensus       240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~  310 (377)
T cd05629         240 ECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRG  310 (377)
T ss_pred             hhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCC
Confidence            9999999999888777777776532  22333  478999999999998 77765   59999999999983


No 62 
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00  E-value=4.2e-46  Score=388.64  Aligned_cols=256  Identities=28%  Similarity=0.517  Sum_probs=217.7

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ..|++++.||+|+||+||+|++..+++.||+|++.+....  .....+.+|+.+++.++||||+++++++.+.+.+|+||
T Consensus         1 ~~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~   80 (381)
T cd05626           1 SMFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (381)
T ss_pred             CCceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence            3689999999999999999999999999999999765432  23456888999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC-----
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL-----  160 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-----  160 (568)
                      ||++||+|.+++...+.+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++.......     
T Consensus        81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~  160 (381)
T cd05626          81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYY  160 (381)
T ss_pred             ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccc
Confidence            999999999999888889999999999999999999999999999999999999999999999999875321000     


Q ss_pred             -----------------------------------------ccccccccCCccccccccccCcccCCcccceechhhHHH
Q psy6203         161 -----------------------------------------ESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLY  199 (568)
Q Consensus       161 -----------------------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~  199 (568)
                                                               .....+.+||+.|+|||++.+.. ++.++|||||||++|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~DiwSlG~il~  239 (381)
T cd05626         161 QKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKG-YTQLCDWWSVGVILF  239 (381)
T ss_pred             cccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCC-CCCccceeehhhHHH
Confidence                                                     00012357999999999998766 589999999999999


Q ss_pred             HHHhCCCCCCCCCHHHHHHHHHcC--CCCCC--CCCChHHHHHHHHccc--cCcCCCCCHHHHhcCccccc
Q psy6203         200 ALLCGFLPFDSDSIDQLYDKILNG--KYTEP--PWMSPNSRQIVRSMLQ--VEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       200 ~lltG~~pf~~~~~~~~~~~i~~~--~~~~~--~~~~~~~~~li~~~L~--~dP~~Rps~~ell~hp~~~~  264 (568)
                      +|++|..||...+..+....+...  ....+  ..+++++.+||.+|+.  .+|..|++++|++.||||..
T Consensus       240 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~  310 (381)
T cd05626         240 EMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSE  310 (381)
T ss_pred             HHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCC
Confidence            999999999888776666665532  22333  3579999999999654  45556999999999999974


No 63 
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00  E-value=1.2e-46  Score=385.16  Aligned_cols=256  Identities=31%  Similarity=0.576  Sum_probs=223.0

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCc--CCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|.+.+.||+|+||+||+|.+..+|+.||+|++++...  .+....+..|+.+++.++||||+++++++.+.+..|+||
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM   80 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence            579999999999999999999999999999999986543  223456788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          86 EYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        86 E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      ||+++|+|.+++... ..+++..++.++.||+.||.|||+.||+||||||+|||++.++.+||+|||++...........
T Consensus        81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~  160 (330)
T cd05601          81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNS  160 (330)
T ss_pred             CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceee
Confidence            999999999999876 6899999999999999999999999999999999999999999999999999876543322223


Q ss_pred             ccccCCccccccccccC-----cccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC----CCCCCCCChHH
Q psy6203         165 QTSCGSPNYAAPEVIKG-----KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK----YTEPPWMSPNS  235 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~-----~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~----~~~~~~~~~~~  235 (568)
                      ....||+.|+|||++.+     ...++.++|||||||++|+|++|..||...+....+..+....    ++..+.+++++
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  240 (330)
T cd05601         161 KLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDF  240 (330)
T ss_pred             ecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHH
Confidence            34579999999999863     3346789999999999999999999999888777777776543    22334578999


Q ss_pred             HHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         236 RQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       236 ~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      .+||.+||+ ||.+|||+++++.||||..
T Consensus       241 ~~li~~ll~-~p~~R~t~~~l~~h~~~~~  268 (330)
T cd05601         241 LDLIQSLLC-GQKERLGYEGLCCHPFFSK  268 (330)
T ss_pred             HHHHHHHcc-ChhhCCCHHHHhCCCCcCC
Confidence            999999998 9999999999999999984


No 64 
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00  E-value=2e-46  Score=390.61  Aligned_cols=255  Identities=28%  Similarity=0.536  Sum_probs=219.2

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCc--CCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++++.||+|+||.||+|++..+++.||+|++.+...  ......+.+|+.+|++++||||+++++.+.+.+.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~   80 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence            479999999999999999999999999999999875432  123456788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC-----
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL-----  160 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-----  160 (568)
                      |||++|+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|.......     
T Consensus        81 E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~  160 (376)
T cd05598          81 DYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY  160 (376)
T ss_pred             eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccc
Confidence            999999999999888889999999999999999999999999999999999999999999999999974221000     


Q ss_pred             -------------------------------------ccccccccCCccccccccccCcccCCcccceechhhHHHHHHh
Q psy6203         161 -------------------------------------ESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC  203 (568)
Q Consensus       161 -------------------------------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt  203 (568)
                                                           .......+||+.|+|||++.+.. ++.++|||||||++|+|++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvilyell~  239 (376)
T cd05598         161 QKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLV  239 (376)
T ss_pred             ccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCC-CCcceeeeeccceeeehhh
Confidence                                                 00012347999999999998766 5899999999999999999


Q ss_pred             CCCCCCCCCHHHHHHHHHcCCC--CC--CCCCChHHHHHHHHccccCcCCCC---CHHHHhcCccccc
Q psy6203         204 GFLPFDSDSIDQLYDKILNGKY--TE--PPWMSPNSRQIVRSMLQVEPGKRI---KIQDLLGHNWVKM  264 (568)
Q Consensus       204 G~~pf~~~~~~~~~~~i~~~~~--~~--~~~~~~~~~~li~~~L~~dP~~Rp---s~~ell~hp~~~~  264 (568)
                      |+.||.+.+..+....+.....  ..  ...+++++.++|.+|+ .+|.+|+   |+.++++||||+.
T Consensus       240 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~  306 (376)
T cd05598         240 GQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKG  306 (376)
T ss_pred             CCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCC
Confidence            9999998887776666654322  22  2357899999999977 5999999   9999999999984


No 65 
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=100.00  E-value=4.5e-46  Score=386.14  Aligned_cols=258  Identities=30%  Similarity=0.567  Sum_probs=221.6

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFM   83 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l   83 (568)
                      ..++|++.+.||+|+||.||+|++..+++.||+|++.+....  .....+.+|+.+++.++||||+++++++.+++.+|+
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l  120 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM  120 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence            347899999999999999999999999999999999754322  234467789999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          84 VIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      ||||++||+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+|..........
T Consensus       121 v~Ey~~gg~L~~~l~~-~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~  199 (370)
T cd05621         121 VMEYMPGGDLVNLMSN-YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVR  199 (370)
T ss_pred             EEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCcee
Confidence            9999999999998865 468999999999999999999999999999999999999999999999999987654322222


Q ss_pred             cccccCCccccccccccCcc---cCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CCCCC--CCChHHH
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQ---YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK--YTEPP--WMSPNSR  236 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~---~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~--~~~~~--~~~~~~~  236 (568)
                      ..+.+||+.|+|||++.+..   .++.++|||||||++|+|++|..||.+.+.......+....  ...+.  .+++.++
T Consensus       200 ~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~  279 (370)
T cd05621         200 CDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAK  279 (370)
T ss_pred             cccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHH
Confidence            34567999999999987542   36789999999999999999999999988887777776643  33333  4689999


Q ss_pred             HHHHHccccCcCC--CCCHHHHhcCccccc
Q psy6203         237 QIVRSMLQVEPGK--RIKIQDLLGHNWVKM  264 (568)
Q Consensus       237 ~li~~~L~~dP~~--Rps~~ell~hp~~~~  264 (568)
                      ++|.+||+.++.+  |+|++|+++||||+.
T Consensus       280 ~li~~~L~~~~~r~~R~~~~e~l~hp~~~~  309 (370)
T cd05621         280 NLICAFLTDREVRLGRNGVEEIKQHPFFKN  309 (370)
T ss_pred             HHHHHHccCchhccCCCCHHHHhcCcccCC
Confidence            9999999865544  899999999999984


No 66 
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00  E-value=4e-46  Score=380.19  Aligned_cols=254  Identities=31%  Similarity=0.577  Sum_probs=226.2

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEEEEEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHI-SHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      +|.+.+.||+|+||.||+|++..+++.||+|++.+....  ........|..++..+ +||+|+++++++.+.+.+|+||
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM   80 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence            589999999999999999999999999999999865322  2234566688888777 4899999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      ||+++|+|.+.+...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... .....
T Consensus        81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~-~~~~~  159 (323)
T cd05616          81 EYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD-GVTTK  159 (323)
T ss_pred             cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC-CCccc
Confidence            99999999999988889999999999999999999999999999999999999999999999999998753321 12234


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHcccc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV  245 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~  245 (568)
                      ..+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+...+...+.......+..+++++.+++.+||+.
T Consensus       160 ~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~l~~  238 (323)
T cd05616         160 TFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTK  238 (323)
T ss_pred             cCCCChhhcCHHHhcCCC-CCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHccc
Confidence            567999999999998776 5899999999999999999999999999999999999888888888999999999999999


Q ss_pred             CcCCCCCH-----HHHhcCccccc
Q psy6203         246 EPGKRIKI-----QDLLGHNWVKM  264 (568)
Q Consensus       246 dP~~Rps~-----~ell~hp~~~~  264 (568)
                      ||.+|+++     .++++||||+.
T Consensus       239 ~p~~R~~~~~~~~~~i~~h~~~~~  262 (323)
T cd05616         239 HPGKRLGCGPEGERDIKEHAFFRY  262 (323)
T ss_pred             CHHhcCCCCCCCHHHHhcCCCcCC
Confidence            99999984     89999999974


No 67 
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00  E-value=3.7e-46  Score=381.35  Aligned_cols=249  Identities=33%  Similarity=0.626  Sum_probs=217.8

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHI-SHQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      +.||+|+||.||+|++..+++.||+|++++....  +....+..|..++..+ +||||+++++++.+.+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~   80 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG   80 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            4799999999999999999999999999865432  2345678899999988 699999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCC
Q psy6203          91 GELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS  170 (568)
Q Consensus        91 g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt  170 (568)
                      |+|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... .......+||
T Consensus        81 g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~gt  159 (329)
T cd05588          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP-GDTTSTFCGT  159 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccC-CCccccccCC
Confidence            999999988889999999999999999999999999999999999999999999999999998643221 1233456799


Q ss_pred             ccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCC---------CHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q psy6203         171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSD---------SIDQLYDKILNGKYTEPPWMSPNSRQIVRS  241 (568)
Q Consensus       171 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~---------~~~~~~~~i~~~~~~~~~~~~~~~~~li~~  241 (568)
                      +.|+|||++.+.. ++.++|||||||++|+|++|+.||...         ......+.+.......+..+++.+.++|++
T Consensus       160 ~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~  238 (329)
T cd05588         160 PNYIAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVLKG  238 (329)
T ss_pred             ccccCHHHHcCCC-CCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence            9999999998766 588999999999999999999999531         223456667777777888899999999999


Q ss_pred             ccccCcCCCCC------HHHHhcCccccc
Q psy6203         242 MLQVEPGKRIK------IQDLLGHNWVKM  264 (568)
Q Consensus       242 ~L~~dP~~Rps------~~ell~hp~~~~  264 (568)
                      ||+.||.+|+|      ++++++||||..
T Consensus       239 ~L~~dP~~R~~~~~~~~~~~i~~hp~~~~  267 (329)
T cd05588         239 FLNKDPKERLGCHPQTGFRDIKSHPFFRN  267 (329)
T ss_pred             HhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            99999999997      789999999974


No 68 
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00  E-value=3.3e-46  Score=379.50  Aligned_cols=249  Identities=36%  Similarity=0.680  Sum_probs=219.7

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHh-CCCCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKH-ISHQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~-l~hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      +.||+|+||.||+|++..+++.||+|++++....  ........|..++.. .+||||+++++++...+.+|+||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g   80 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4799999999999999999999999999864321  233445567777765 4799999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCC
Q psy6203          91 GELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS  170 (568)
Q Consensus        91 g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt  170 (568)
                      |+|.+++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ......+||
T Consensus        81 g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~~~~~gt  159 (316)
T cd05592          81 GDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKASTFCGT  159 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-CccccccCC
Confidence            9999999888899999999999999999999999999999999999999999999999999987543221 233456799


Q ss_pred             ccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCC
Q psy6203         171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKR  250 (568)
Q Consensus       171 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  250 (568)
                      +.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+..++...+.......+..+++++.++|.+||+.||.+|
T Consensus       160 ~~y~aPE~~~~~~-~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~l~~~P~~R  238 (316)
T cd05592         160 PDYIAPEILKGQK-YNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLFERDPTKR  238 (316)
T ss_pred             ccccCHHHHcCCC-CCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCHHHc
Confidence            9999999998776 589999999999999999999999999988888888888777888899999999999999999999


Q ss_pred             CCH-HHHhcCccccc
Q psy6203         251 IKI-QDLLGHNWVKM  264 (568)
Q Consensus       251 ps~-~ell~hp~~~~  264 (568)
                      |++ ++++.||||..
T Consensus       239 ~~~~~~l~~h~~~~~  253 (316)
T cd05592         239 LGVDGDIRQHPFFRG  253 (316)
T ss_pred             CCChHHHHcCcccCC
Confidence            986 58999999974


No 69 
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00  E-value=4e-46  Score=380.16  Aligned_cols=249  Identities=34%  Similarity=0.627  Sum_probs=219.6

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHH-HHHhCCCCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEIN-ALKHISHQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~-~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      +.||+|+||+||+|.+..+|+.||+|++.+....  .....+..|.. +++.++||||+++++.+.+.+..|+||||+++
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG   80 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence            4799999999999999999999999999764322  22234444544 56789999999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCC
Q psy6203          91 GELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS  170 (568)
Q Consensus        91 g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt  170 (568)
                      |+|..++...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... .......+||
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt  159 (323)
T cd05575          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEH-SKTTSTFCGT  159 (323)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccC-CCccccccCC
Confidence            999999988889999999999999999999999999999999999999999999999999998753222 2233455799


Q ss_pred             ccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCC
Q psy6203         171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKR  250 (568)
Q Consensus       171 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  250 (568)
                      +.|+|||++.+.. ++.++|||||||++|+|++|..||...+..++...+..+....++.+++.+.++|.+||+.||.+|
T Consensus       160 ~~y~aPE~~~~~~-~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  238 (323)
T cd05575         160 PEYLAPEVLRKQP-YDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQKDRTKR  238 (323)
T ss_pred             hhhcChhhhcCCC-CCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhC
Confidence            9999999998766 589999999999999999999999999988999999888888888899999999999999999999


Q ss_pred             CCH----HHHhcCccccc
Q psy6203         251 IKI----QDLLGHNWVKM  264 (568)
Q Consensus       251 ps~----~ell~hp~~~~  264 (568)
                      |++    .++++||||..
T Consensus       239 ~~~~~~~~~il~~~~~~~  256 (323)
T cd05575         239 LGAKDDFLEIKNHVFFSS  256 (323)
T ss_pred             CCCCCCHHHHHcCCCcCC
Confidence            997    69999999974


No 70 
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=100.00  E-value=5.5e-46  Score=377.78  Aligned_cols=249  Identities=31%  Similarity=0.620  Sum_probs=220.4

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCc--CCchHHHHHHHHHHHh-CCCCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKH-ISHQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~Ei~~l~~-l~hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      +.||+|+||+||+|++..+++.||+|+++....  .........|..+++. ++||||+++++++.+.+.+|+||||++|
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~   80 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG   80 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence            479999999999999999999999999986532  2334456667888876 4899999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCC
Q psy6203          91 GELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS  170 (568)
Q Consensus        91 g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt  170 (568)
                      |+|.+++.....+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... .......+||
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt  159 (316)
T cd05619          81 GDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLG-DAKTCTFCGT  159 (316)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCC-CCceeeecCC
Confidence            999999988888999999999999999999999999999999999999999999999999998753221 1223455799


Q ss_pred             ccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCC
Q psy6203         171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKR  250 (568)
Q Consensus       171 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  250 (568)
                      +.|+|||++.+.. ++.++||||+||++|+|++|..||.+.+..++.+.+..+....+.+++.++.++|.+||+.||++|
T Consensus       160 ~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~~R  238 (316)
T cd05619         160 PDYIAPEILLGQK-YNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVREPERR  238 (316)
T ss_pred             ccccCHHHHcCCC-CCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHhccCHhhc
Confidence            9999999998766 589999999999999999999999998888888888877777778899999999999999999999


Q ss_pred             CCHH-HHhcCccccc
Q psy6203         251 IKIQ-DLLGHNWVKM  264 (568)
Q Consensus       251 ps~~-ell~hp~~~~  264 (568)
                      |++. +++.||||+.
T Consensus       239 ~~~~~~l~~h~~~~~  253 (316)
T cd05619         239 LGVKGDIRQHPFFRE  253 (316)
T ss_pred             CCChHHHHcCcccCC
Confidence            9996 9999999974


No 71 
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00  E-value=4.9e-46  Score=378.63  Aligned_cols=249  Identities=35%  Similarity=0.669  Sum_probs=222.9

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCc--CCchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHI-SHQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      +.||+|+||+||+|.+..+++.||+|++++...  ......+..|+.+++.+ +||||+++++++.+.+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~   80 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG   80 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            479999999999999999999999999986532  22345667888888888 699999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCC
Q psy6203          91 GELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS  170 (568)
Q Consensus        91 g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt  170 (568)
                      |+|.+++...+.+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++...... .......+||
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~g~  159 (318)
T cd05570          81 GDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG-GVTTSTFCGT  159 (318)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC-CCcccceecC
Confidence            999999988889999999999999999999999999999999999999999999999999998653222 1223445799


Q ss_pred             ccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCC
Q psy6203         171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKR  250 (568)
Q Consensus       171 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  250 (568)
                      +.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+.......+.......+..+++.+.+||++||+.||.+|
T Consensus       160 ~~y~aPE~~~~~~-~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dP~~R  238 (318)
T cd05570         160 PDYIAPEILSYQP-YGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTKNPEKR  238 (318)
T ss_pred             ccccCHHHhcCCC-CCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHccCCHHHc
Confidence            9999999998776 589999999999999999999999998888888888888888888899999999999999999999


Q ss_pred             CCH-----HHHhcCccccc
Q psy6203         251 IKI-----QDLLGHNWVKM  264 (568)
Q Consensus       251 ps~-----~ell~hp~~~~  264 (568)
                      ||+     .+++.||||+.
T Consensus       239 ~s~~~~~~~~ll~~~~~~~  257 (318)
T cd05570         239 LGCLPTGEQDIKGHPFFRE  257 (318)
T ss_pred             CCCCCCCHHHHhcCCCcCC
Confidence            999     99999999974


No 72 
>KOG0589|consensus
Probab=100.00  E-value=7.3e-47  Score=380.30  Aligned_cols=255  Identities=31%  Similarity=0.490  Sum_probs=234.0

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCc-hHHHHHHHHHHHhCCCCCcceeeEEEEeCCE-EEEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLFQVIETSSH-IFMV   84 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~-~~lV   84 (568)
                      .++|..++.+|+|+||.+++++++..+..||+|.+......+. ......|+.+++++.|||||.+.+.|..++. .+||
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv   82 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV   82 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence            4689999999999999999999999999999999987665543 3367789999999999999999999998887 9999


Q ss_pred             EeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc
Q psy6203          85 IEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES  162 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  162 (568)
                      |+||+||+|.+.|.+.  ..++|+.+..++.|++.|+.|||+++|+|||||+.||+++.++.|||+|||+|+..... ..
T Consensus        83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~-~~  161 (426)
T KOG0589|consen   83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE-DS  161 (426)
T ss_pred             EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCc-hh
Confidence            9999999999999864  46899999999999999999999999999999999999999999999999999987654 23


Q ss_pred             ccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC-CCCCCCCChHHHHHHHH
Q psy6203         163 QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQIVRS  241 (568)
Q Consensus       163 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~  241 (568)
                      ...+.+|||.|++||++.+.+ |+.|+|||||||++|||++-+++|.+.+...+..+|..+. .+.+...+.+++.+|+.
T Consensus       162 ~a~tvvGTp~YmcPEil~d~p-Yn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~  240 (426)
T KOG0589|consen  162 LASTVVGTPYYMCPEILSDIP-YNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVKS  240 (426)
T ss_pred             hhheecCCCcccCHHHhCCCC-CCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccccHHHHHHHHH
Confidence            566788999999999999988 5999999999999999999999999999999999999988 46677899999999999


Q ss_pred             ccccCcCCCCCHHHHhcCcccc
Q psy6203         242 MLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       242 ~L~~dP~~Rps~~ell~hp~~~  263 (568)
                      ||..+|..||++.++|.+|.+.
T Consensus       241 ~l~~~P~~RPsa~~LL~~P~l~  262 (426)
T KOG0589|consen  241 MLRKNPEHRPSALELLRRPHLL  262 (426)
T ss_pred             HhhcCCccCCCHHHHhhChhhh
Confidence            9999999999999999998876


No 73 
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00  E-value=7.3e-46  Score=384.02  Aligned_cols=255  Identities=28%  Similarity=0.618  Sum_probs=221.1

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCc--CCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++.+.||+|+||+||+|.+..+++.||+|++.....  .+....+..|+.++..++||||+++++.+.+.+.+|+||
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~   80 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM   80 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            579999999999999999999999999999999975432  233557788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc----
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE----  161 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~----  161 (568)
                      ||++||+|.+++.+.+.+++..++.++.|++.||.|||++||+||||||+|||++.+|.+||+|||++........    
T Consensus        81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~  160 (360)
T cd05627          81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFY  160 (360)
T ss_pred             eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccc
Confidence            9999999999999888999999999999999999999999999999999999999999999999999864321100    


Q ss_pred             ------------------------------cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCC
Q psy6203         162 ------------------------------SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSD  211 (568)
Q Consensus       162 ------------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~  211 (568)
                                                    ......+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~-~~~~~DiwSlGvilyel~tG~~Pf~~~  239 (360)
T cd05627         161 RNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTG-YNKLCDWWSLGVIMYEMLIGYPPFCSE  239 (360)
T ss_pred             cccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCC-CCCcceeccccceeeecccCCCCCCCC
Confidence                                          0012357999999999998776 589999999999999999999999998


Q ss_pred             CHHHHHHHHHcCC--CCCCC--CCChHHHHHHHHccccCcCCCC---CHHHHhcCccccc
Q psy6203         212 SIDQLYDKILNGK--YTEPP--WMSPNSRQIVRSMLQVEPGKRI---KIQDLLGHNWVKM  264 (568)
Q Consensus       212 ~~~~~~~~i~~~~--~~~~~--~~~~~~~~li~~~L~~dP~~Rp---s~~ell~hp~~~~  264 (568)
                      +.......+....  ...++  .+++++++||.+|+. ||.+|+   +++|+++||||..
T Consensus       240 ~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~  298 (360)
T cd05627         240 TPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEG  298 (360)
T ss_pred             CHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCC
Confidence            8888877777532  23333  378999999999875 999998   4899999999984


No 74 
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00  E-value=1.2e-45  Score=377.99  Aligned_cols=254  Identities=23%  Similarity=0.384  Sum_probs=217.8

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      .++|++.+.||+|+||.||+|++..+|..||+|++...........+.+|++++++++||||+++++++...+..++|||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   83 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME   83 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence            47899999999999999999999999999999998764322334578899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc-CceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          87 YCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL-GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        87 ~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      |+++++|.+++.....+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++......   ...
T Consensus        84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---~~~  160 (331)
T cd06649          84 HMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MAN  160 (331)
T ss_pred             cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc---ccc
Confidence            999999999998888899999999999999999999986 6999999999999999999999999998755332   233


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHH------------------------
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL------------------------  221 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~------------------------  221 (568)
                      ...||+.|+|||++.+.. ++.++|||||||++|+|++|+.||...+..++...+.                        
T Consensus       161 ~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (331)
T cd06649         161 SFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRP  239 (331)
T ss_pred             cCCCCcCcCCHhHhcCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCccccccccc
Confidence            457899999999998766 6899999999999999999999997665544332211                        


Q ss_pred             ----------------------cCCCCC--CCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         222 ----------------------NGKYTE--PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       222 ----------------------~~~~~~--~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                                            ....+.  ...+++++++||.+||+.||++|||++|+++||||+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~  306 (331)
T cd06649         240 VSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKR  306 (331)
T ss_pred             ccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhh
Confidence                                  111110  1136789999999999999999999999999999984


No 75 
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00  E-value=1.4e-45  Score=376.89  Aligned_cols=249  Identities=34%  Similarity=0.648  Sum_probs=216.6

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHI-SHQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      +.||+|+||+||+|++..+++.||+|++++....  .....+..|+.++.++ +||||+++++++...+..|+||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~   80 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG   80 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence            4799999999999999999999999999875432  2345677888888776 799999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCC
Q psy6203          91 GELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS  170 (568)
Q Consensus        91 g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt  170 (568)
                      |+|..++...+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++...... .......+||
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~-~~~~~~~~gt  159 (329)
T cd05618          81 GDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP-GDTTSTFCGT  159 (329)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCC-CCccccccCC
Confidence            999999988889999999999999999999999999999999999999999999999999998753221 1223456799


Q ss_pred             ccccccccccCcccCCcccceechhhHHHHHHhCCCCCCC---------CCHHHHHHHHHcCCCCCCCCCChHHHHHHHH
Q psy6203         171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS---------DSIDQLYDKILNGKYTEPPWMSPNSRQIVRS  241 (568)
Q Consensus       171 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~---------~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~  241 (568)
                      +.|+|||++.+.. ++.++|||||||++|+|++|..||..         .....+.+.+.......|..++..+.++|++
T Consensus       160 ~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~  238 (329)
T cd05618         160 PNYIAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVLKS  238 (329)
T ss_pred             ccccCHHHHcCCC-CCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Confidence            9999999998776 58899999999999999999999952         1233455667777777888899999999999


Q ss_pred             ccccCcCCCCC------HHHHhcCccccc
Q psy6203         242 MLQVEPGKRIK------IQDLLGHNWVKM  264 (568)
Q Consensus       242 ~L~~dP~~Rps------~~ell~hp~~~~  264 (568)
                      ||+.||.+|||      +.++++||||+.
T Consensus       239 ~L~~dP~~R~~~~~~~~~~~i~~hp~f~~  267 (329)
T cd05618         239 FLNKDPKERLGCHPQTGFADIQGHPFFRN  267 (329)
T ss_pred             HhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            99999999998      589999999974


No 76 
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00  E-value=4.2e-46  Score=379.21  Aligned_cols=250  Identities=31%  Similarity=0.617  Sum_probs=222.6

Q ss_pred             EeeecccCCeEEEEEEEc---CCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEecc
Q psy6203          13 ERTVGSGGFAKVKLATHV---LTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYC   88 (568)
Q Consensus        13 ~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~   88 (568)
                      ++.||+|+||.||++++.   .+|+.||+|++.+.... .....+..|+.++++++||||+++++++.+.+.+|+||||+
T Consensus         1 l~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~   80 (318)
T cd05582           1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFL   80 (318)
T ss_pred             CceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCC
Confidence            367999999999999863   57899999999865432 23345678999999999999999999999999999999999


Q ss_pred             CCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccccc
Q psy6203          89 PGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSC  168 (568)
Q Consensus        89 ~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  168 (568)
                      ++|+|.+++.....+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++...... .......+
T Consensus        81 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~  159 (318)
T cd05582          81 RGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH-EKKAYSFC  159 (318)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC-CCceeccc
Confidence            99999999988888999999999999999999999999999999999999999999999999998764332 12234567


Q ss_pred             CCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcC
Q psy6203         169 GSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG  248 (568)
Q Consensus       169 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~  248 (568)
                      ||+.|+|||++.+.. ++.++|||||||++|+|++|+.||...+..+....+.......+..+++.+.+||++||+.||.
T Consensus       160 g~~~y~aPE~~~~~~-~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~P~  238 (318)
T cd05582         160 GTVEYMAPEVVNRRG-HTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFKRNPA  238 (318)
T ss_pred             CChhhcCHHHHcCCC-CCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHh
Confidence            999999999998765 5889999999999999999999999988888888888888888888999999999999999999


Q ss_pred             CCCC-----HHHHhcCccccc
Q psy6203         249 KRIK-----IQDLLGHNWVKM  264 (568)
Q Consensus       249 ~Rps-----~~ell~hp~~~~  264 (568)
                      +|||     +++++.||||..
T Consensus       239 ~R~~a~~~~~~~~~~~~~~~~  259 (318)
T cd05582         239 NRLGAGPDGVEEIKRHPFFST  259 (318)
T ss_pred             HcCCCCCCCHHHHhCCCCcCC
Confidence            9999     788999999974


No 77 
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00  E-value=1.6e-45  Score=375.62  Aligned_cols=254  Identities=31%  Similarity=0.577  Sum_probs=225.6

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCc--CCchHHHHHHHHHHHhCC-CCCcceeeEEEEeCCEEEEEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL--GEDLPRVKLEINALKHIS-HQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      +|++.+.||+|+||+||+|.++.+|+.||+|++.+...  ......+..|..++..+. |++|+++++++.+.+.+|+||
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~   80 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM   80 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence            47899999999999999999999999999999986432  223455677888888886 578889999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      ||++||+|.+++...+.+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... .....
T Consensus        81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~-~~~~~  159 (323)
T cd05615          81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD-GVTTR  159 (323)
T ss_pred             cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCC-Ccccc
Confidence            99999999999988889999999999999999999999999999999999999999999999999998754322 12234


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHcccc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV  245 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~  245 (568)
                      ..+||+.|+|||++.+.. ++.++||||+||++|+|++|..||.+.+...+...+.......+..+++++.+++.+||+.
T Consensus       160 ~~~gt~~y~aPE~~~~~~-~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~  238 (323)
T cd05615         160 TFCGTPDYIAPEIIAYQP-YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTK  238 (323)
T ss_pred             CccCCccccCHHHHcCCC-CCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHccc
Confidence            557999999999998766 5899999999999999999999999999888889998888888888999999999999999


Q ss_pred             CcCCCCC-----HHHHhcCccccc
Q psy6203         246 EPGKRIK-----IQDLLGHNWVKM  264 (568)
Q Consensus       246 dP~~Rps-----~~ell~hp~~~~  264 (568)
                      ||.+|++     .+++++||||..
T Consensus       239 ~p~~R~~~~~~~~~~i~~h~~f~~  262 (323)
T cd05615         239 HPSKRLGCGPEGERDIREHAFFRR  262 (323)
T ss_pred             CHhhCCCCCCCCHHHHhcCcccCC
Confidence            9999997     579999999984


No 78 
>KOG0607|consensus
Probab=100.00  E-value=7.8e-47  Score=354.95  Aligned_cols=257  Identities=33%  Similarity=0.637  Sum_probs=225.1

Q ss_pred             cCeEE-EeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCC-CCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYIL-ERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS-HQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i-~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      +-|++ .+.||+|+|+.|--|....+|..||||++.+. ......++.+|++++.+.+ |+||++++++|+++..+||||
T Consensus        77 d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq-~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVf  155 (463)
T KOG0607|consen   77 DMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ-PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVF  155 (463)
T ss_pred             HHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC-CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEE
Confidence            34554 36799999999999999999999999999887 3445678899999999996 999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCC---CeEEEeecCccCCC-----
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQ---NLKLIDFGLCAKPE-----  157 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~---~~kl~DFG~a~~~~-----  157 (568)
                      |-+.||.|..+|.++..++|.++..++++|+.||.|||.+||.||||||+|||.....   -+|||||.+.....     
T Consensus       156 EKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~  235 (463)
T KOG0607|consen  156 EKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDC  235 (463)
T ss_pred             ecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCC
Confidence            9999999999999999999999999999999999999999999999999999996654   48999998865321     


Q ss_pred             -CCCccccccccCCcccccccccc----CcccCCcccceechhhHHHHHHhCCCCCCCC---------------CHHHHH
Q psy6203         158 -GGLESQLQTSCGSPNYAAPEVIK----GKQYYGSETDVWSMGVMLYALLCGFLPFDSD---------------SIDQLY  217 (568)
Q Consensus       158 -~~~~~~~~~~~gt~~y~aPE~l~----~~~~~~~~~DiwSlG~il~~lltG~~pf~~~---------------~~~~~~  217 (568)
                       ......+.+.+|+..|||||+..    ...+|+.++|.||||||+|-|++|.+||.+.               -.+.++
T Consensus       236 spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LF  315 (463)
T KOG0607|consen  236 SPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLF  315 (463)
T ss_pred             CCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHH
Confidence             11223455678999999999863    3456899999999999999999999999652               145688


Q ss_pred             HHHHcCCCCCCCC----CChHHHHHHHHccccCcCCCCCHHHHhcCcccccC
Q psy6203         218 DKILNGKYTEPPW----MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       218 ~~i~~~~~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                      +.|+.|.+.+|..    +|.+++++|..+|..|+.+|.++.++++|||++..
T Consensus       316 esIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~  367 (463)
T KOG0607|consen  316 ESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRC  367 (463)
T ss_pred             HHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcccccc
Confidence            9999999998863    89999999999999999999999999999999854


No 79 
>KOG0690|consensus
Probab=100.00  E-value=2.4e-47  Score=359.05  Aligned_cols=255  Identities=32%  Similarity=0.622  Sum_probs=235.6

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|..+++||+|.||+|-+|+.+.+|+.||+|++++.-+-  +.......|-.+|+..+||.+..+--.|+..+.+|+||
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVM  247 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVM  247 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEE
Confidence            6788999999999999999999999999999999876543  23445566889999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      ||+.||+|+-++.....++|+.++.+-..|++||.|||+++||.||||.+|+|+|.+|++||+|||+++..-.. .....
T Consensus       248 eyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~-g~t~k  326 (516)
T KOG0690|consen  248 EYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKY-GDTTK  326 (516)
T ss_pred             EEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccc-cceec
Confidence            99999999999988889999999999999999999999999999999999999999999999999998864332 34668


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHcccc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV  245 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~  245 (568)
                      +.||||.|+|||++.... |+.++|.|.+||++|||++|++||...+.+.+++.|..+...+|..++++++.|+..+|.+
T Consensus       327 TFCGTPEYLAPEVleDnD-YgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls~eAktLLsGLL~k  405 (516)
T KOG0690|consen  327 TFCGTPEYLAPEVLEDND-YGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLSPEAKTLLSGLLKK  405 (516)
T ss_pred             cccCChhhcCchhhcccc-ccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccCCHHHHHHHHHHhhc
Confidence            899999999999999887 5999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcCCCCC-----HHHHhcCccccc
Q psy6203         246 EPGKRIK-----IQDLLGHNWVKM  264 (568)
Q Consensus       246 dP~~Rps-----~~ell~hp~~~~  264 (568)
                      ||.+|..     +.||.+|+||..
T Consensus       406 dP~kRLGgGpdDakEi~~h~FF~~  429 (516)
T KOG0690|consen  406 DPKKRLGGGPDDAKEIMRHRFFAS  429 (516)
T ss_pred             ChHhhcCCCchhHHHHHhhhhhcc
Confidence            9999974     899999999974


No 80 
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00  E-value=2.5e-45  Score=380.83  Aligned_cols=257  Identities=32%  Similarity=0.583  Sum_probs=220.5

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      .++|++.+.||+|+||.||+|+++.+++.||+|++.+....  .....+..|+.+++.++||||+++++.+.+.+.+|+|
T Consensus        42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv  121 (371)
T cd05622          42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV  121 (371)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence            37899999999999999999999999999999998754321  2334577899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          85 IEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |||++||+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...........
T Consensus       122 ~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~  200 (371)
T cd05622         122 MEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRC  200 (371)
T ss_pred             EcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccc
Confidence            999999999998865 4689999999999999999999999999999999999999999999999999876543322233


Q ss_pred             ccccCCccccccccccCcc---cCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CC--CCCCCChHHHH
Q psy6203         165 QTSCGSPNYAAPEVIKGKQ---YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK--YT--EPPWMSPNSRQ  237 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~---~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~--~~--~~~~~~~~~~~  237 (568)
                      ...+||+.|+|||++.+..   .++.++|||||||++|+|++|..||.+.+....+..+....  ..  ....++..+++
T Consensus       201 ~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~  280 (371)
T cd05622         201 DTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKN  280 (371)
T ss_pred             cCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHH
Confidence            4567999999999987542   36789999999999999999999999998888888887643  22  23458999999


Q ss_pred             HHHHccccCcCC--CCCHHHHhcCccccc
Q psy6203         238 IVRSMLQVEPGK--RIKIQDLLGHNWVKM  264 (568)
Q Consensus       238 li~~~L~~dP~~--Rps~~ell~hp~~~~  264 (568)
                      +|.+||..++.+  |++++|+++||||+.
T Consensus       281 li~~~L~~~~~r~~r~~~~ei~~h~~~~~  309 (371)
T cd05622         281 LICAFLTDREVRLGRNGVEEIKRHLFFKN  309 (371)
T ss_pred             HHHHHcCChhhhcCCCCHHHHhcCcccCC
Confidence            999999844443  789999999999974


No 81 
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=2e-45  Score=383.47  Aligned_cols=251  Identities=21%  Similarity=0.293  Sum_probs=208.1

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      .++|++.+.||+|+||.||+|.+..+++.||+|....       ..+.+|+.++++++||||+++++++......++|||
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e  163 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILP  163 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEe
Confidence            3689999999999999999999999999999997532       246789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          87 YCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        87 ~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      ++ +++|..++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+|.............
T Consensus       164 ~~-~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~  242 (391)
T PHA03212        164 RY-KTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYG  242 (391)
T ss_pred             cC-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccccccccc
Confidence            99 57899999888889999999999999999999999999999999999999999999999999987543322223345


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCC-------HHHHHHHHH------------------
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-------IDQLYDKIL------------------  221 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~-------~~~~~~~i~------------------  221 (568)
                      .+||+.|+|||++.+.. ++.++|||||||++|+|++|..||....       .......+.                  
T Consensus       243 ~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~  321 (391)
T PHA03212        243 WAGTIATNAPELLARDP-YGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANL  321 (391)
T ss_pred             ccCccCCCChhhhcCCC-CCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHH
Confidence            67999999999998766 6899999999999999999998764321       111111110                  


Q ss_pred             --------cCCCC----CC-----CCCChHHHHHHHHccccCcCCCCCHHHHhcCcccccCC
Q psy6203         222 --------NGKYT----EP-----PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGP  266 (568)
Q Consensus       222 --------~~~~~----~~-----~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  266 (568)
                              .....    .+     ..++.++.+||.+||+.||.+|||++|+|+||||...+
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~  383 (391)
T PHA03212        322 DEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIP  383 (391)
T ss_pred             HHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCC
Confidence                    00000    00     12456889999999999999999999999999998543


No 82 
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00  E-value=3e-45  Score=376.13  Aligned_cols=256  Identities=26%  Similarity=0.421  Sum_probs=210.0

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeC-----CEEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETS-----SHIF   82 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~-----~~~~   82 (568)
                      +|++.+.||+|+||.||+|.+..+|..||+|++...... .....+.+|+.++++++||||+++++++...     ..+|
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~   80 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY   80 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence            699999999999999999999999999999998753221 2345678899999999999999999988543     3589


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC--
Q psy6203          83 MVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL--  160 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~--  160 (568)
                      +||||| +++|.+.+.....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......  
T Consensus        81 lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~  159 (338)
T cd07859          81 VVFELM-ESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT  159 (338)
T ss_pred             EEEecC-CCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCc
Confidence            999999 57899999888889999999999999999999999999999999999999999999999999987543211  


Q ss_pred             ccccccccCCccccccccccCc-ccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc-----------------
Q psy6203         161 ESQLQTSCGSPNYAAPEVIKGK-QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN-----------------  222 (568)
Q Consensus       161 ~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~-----------------  222 (568)
                      .......+||+.|+|||++.+. ..++.++|||||||++|+|++|++||.+.+.......+..                 
T Consensus       160 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~  239 (338)
T cd07859         160 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEK  239 (338)
T ss_pred             cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence            1122345799999999998652 3468899999999999999999999987654332211110                 


Q ss_pred             ----------CCCC----CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCcccccC
Q psy6203         223 ----------GKYT----EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       223 ----------~~~~----~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                                ....    ..+..++.+.++|.+||+.||++|||++|+++||||+..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~  296 (338)
T cd07859         240 ARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGL  296 (338)
T ss_pred             HHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhc
Confidence                      0000    012367889999999999999999999999999999853


No 83 
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00  E-value=4.7e-45  Score=373.47  Aligned_cols=257  Identities=30%  Similarity=0.597  Sum_probs=218.5

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++.+.||+|+||+||++++..+++.||+|++.+....  .....+..|+.+++.++||||+++++++.+.+.+|+||
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM   80 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence            5799999999999999999999999999999999753221  23456788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          86 EYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        86 E~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      ||++||+|.+++.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...........
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~  160 (331)
T cd05597          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQS  160 (331)
T ss_pred             ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCccc
Confidence            99999999999976 46799999999999999999999999999999999999999999999999999876543322222


Q ss_pred             ccccCCccccccccccC----cccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CCCC---CCCChHH
Q psy6203         165 QTSCGSPNYAAPEVIKG----KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK--YTEP---PWMSPNS  235 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~----~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~--~~~~---~~~~~~~  235 (568)
                      ...+||+.|+|||++.+    ...++.++||||+||++|+|++|+.||.+.+..+....+....  ...+   ..+++.+
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  240 (331)
T cd05597         161 NVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEA  240 (331)
T ss_pred             cceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHH
Confidence            33569999999999863    2346789999999999999999999999888777777776532  2222   3478999


Q ss_pred             HHHHHHccccCcCC--CCCHHHHhcCccccc
Q psy6203         236 RQIVRSMLQVEPGK--RIKIQDLLGHNWVKM  264 (568)
Q Consensus       236 ~~li~~~L~~dP~~--Rps~~ell~hp~~~~  264 (568)
                      +++|++||..++++  |++++++++||||..
T Consensus       241 ~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~  271 (331)
T cd05597         241 KDLIRRLICSPETRLGRNGLQDFKDHPFFEG  271 (331)
T ss_pred             HHHHHHHccCcccccCCCCHHHHhcCCCCCC
Confidence            99999999765444  889999999999974


No 84 
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00  E-value=1.5e-45  Score=376.37  Aligned_cols=249  Identities=32%  Similarity=0.610  Sum_probs=219.0

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHH-HHHhCCCCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEIN-ALKHISHQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~-~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      +.||+|+||+||+|.+..+|+.||+|++.+....  .....+..|.. +++.++||||+++++++...+..|+||||+++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG   80 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence            4699999999999999999999999999764322  22334455554 46779999999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCC
Q psy6203          91 GELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS  170 (568)
Q Consensus        91 g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt  170 (568)
                      |+|...+...+.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... .......+||
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~-~~~~~~~~gt  159 (325)
T cd05604          81 GELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQ-SDTTTTFCGT  159 (325)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCC-CCCcccccCC
Confidence            999999988889999999999999999999999999999999999999999999999999998753222 1233456799


Q ss_pred             ccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCC
Q psy6203         171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKR  250 (568)
Q Consensus       171 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  250 (568)
                      +.|+|||++.+.. ++.++|||||||++|+|++|..||...+..++...+..+....++..+..+.++|.+||+.||.+|
T Consensus       160 ~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~p~~R  238 (325)
T cd05604         160 PEYLAPEVIRKQP-YDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEKDRQRR  238 (325)
T ss_pred             hhhCCHHHHcCCC-CCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHHhccCHHhc
Confidence            9999999998766 588999999999999999999999999988888888888877777899999999999999999999


Q ss_pred             CCH----HHHhcCccccc
Q psy6203         251 IKI----QDLLGHNWVKM  264 (568)
Q Consensus       251 ps~----~ell~hp~~~~  264 (568)
                      |++    .+++.||||+.
T Consensus       239 ~~~~~~~~~i~~h~~f~~  256 (325)
T cd05604         239 LGAKEDFLEIQEHPFFES  256 (325)
T ss_pred             CCCCCCHHHHhcCCCcCC
Confidence            976    59999999974


No 85 
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=100.00  E-value=2.3e-45  Score=374.98  Aligned_cols=248  Identities=33%  Similarity=0.609  Sum_probs=217.4

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHH-HHHHhCCCCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEI-NALKHISHQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei-~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      +.||+|+||+||+|++..+++.||+|++.+....  .....+..|. .+++.++||||+++++++...+..|+||||+++
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~   80 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING   80 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence            4799999999999999999999999999764321  1222334444 456789999999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCC
Q psy6203          91 GELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS  170 (568)
Q Consensus        91 g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt  170 (568)
                      |+|.+.+...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...... .......+||
T Consensus        81 ~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~-~~~~~~~~gt  159 (325)
T cd05602          81 GELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH-NGTTSTFCGT  159 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccC-CCCcccccCC
Confidence            999999988888999999999999999999999999999999999999999999999999998753221 1223456799


Q ss_pred             ccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCC
Q psy6203         171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKR  250 (568)
Q Consensus       171 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  250 (568)
                      +.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+..+.+..+.......++.+++.+.++|.+||+.||.+|
T Consensus       160 ~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  238 (325)
T cd05602         160 PEYLAPEVLHKQP-YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKR  238 (325)
T ss_pred             ccccCHHHHcCCC-CCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCCCHHHHHHHHHHcccCHHHC
Confidence            9999999998766 588999999999999999999999999888888888888777778899999999999999999999


Q ss_pred             CCHH----HHhcCcccc
Q psy6203         251 IKIQ----DLLGHNWVK  263 (568)
Q Consensus       251 ps~~----ell~hp~~~  263 (568)
                      +++.    ++++|+||.
T Consensus       239 ~~~~~~~~~i~~~~~~~  255 (325)
T cd05602         239 LGAKDDFMEIKNHIFFS  255 (325)
T ss_pred             CCCCCCHHHHhcCcccC
Confidence            9876    899999996


No 86 
>KOG0658|consensus
Probab=100.00  E-value=5e-46  Score=358.23  Aligned_cols=248  Identities=30%  Similarity=0.460  Sum_probs=210.5

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCC-----EEEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSS-----HIFM   83 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~-----~~~l   83 (568)
                      .|.-.+++|.|+||.||.|....+++.||||.+-....     .-.+|+.+|+.++|||||++.-+|....     ...+
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnl   99 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNL   99 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHH
Confidence            57889999999999999999999999999998765432     2246999999999999999998885332     3468


Q ss_pred             EEeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCC-CCeEEEeecCccCCCC
Q psy6203          84 VIEYCPGGELLDHIVE----RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRN-QNLKLIDFGLCAKPEG  158 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~-~~~kl~DFG~a~~~~~  158 (568)
                      ||||++ .+|.+.++.    +.+++.-.++-+..||++||.|||+.||+||||||+|||+|.+ |.+||||||.|+....
T Consensus       100 VleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~  178 (364)
T KOG0658|consen  100 VLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVK  178 (364)
T ss_pred             HHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeecc
Confidence            999996 489888874    5789999999999999999999999999999999999999976 8999999999988765


Q ss_pred             CCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc--------------CC
Q psy6203         159 GLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN--------------GK  224 (568)
Q Consensus       159 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~--------------~~  224 (568)
                      +.  ...+...|..|+|||.+.|...|+.+.||||.||++.||+-|++.|.+++.......|.+              ..
T Consensus       179 ~e--pniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~  256 (364)
T KOG0658|consen  179 GE--PNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPN  256 (364)
T ss_pred             CC--CceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcc
Confidence            43  235566799999999999999999999999999999999999999999876555544422              11


Q ss_pred             ---CC------------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         225 ---YT------------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       225 ---~~------------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                         ..            .....++++.+|+.++|+++|.+|.++.|++.||||..
T Consensus       257 y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFde  311 (364)
T KOG0658|consen  257 YTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDE  311 (364)
T ss_pred             cccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHH
Confidence               00            11236899999999999999999999999999999974


No 87 
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00  E-value=2.8e-45  Score=373.65  Aligned_cols=249  Identities=32%  Similarity=0.596  Sum_probs=218.5

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHH-HHHhCCCCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEIN-ALKHISHQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~-~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      +.||+|+||.||+|++..+|+.||+|++.+....  .....+..|.. +++.++||||+++++++.+.+..|+||||++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG   80 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence            4799999999999999999999999999764322  12334445544 57889999999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCC
Q psy6203          91 GELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS  170 (568)
Q Consensus        91 g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt  170 (568)
                      ++|...+.....+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++...... .......+||
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt  159 (321)
T cd05603          81 GELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP-EETTSTFCGT  159 (321)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCC-CCccccccCC
Confidence            999999988888999999999999999999999999999999999999999999999999998753221 1223455799


Q ss_pred             ccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCC
Q psy6203         171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKR  250 (568)
Q Consensus       171 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  250 (568)
                      +.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+...+...+..+....++..+..+.++|.+||+.||.+|
T Consensus       160 ~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  238 (321)
T cd05603         160 PEYLAPEVLRKEP-YDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTVAACDLLVGLLHKDQRRR  238 (321)
T ss_pred             cccCCHHHhcCCC-CCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCHhhc
Confidence            9999999998765 588999999999999999999999999988888999888888888889999999999999999999


Q ss_pred             CCH----HHHhcCccccc
Q psy6203         251 IKI----QDLLGHNWVKM  264 (568)
Q Consensus       251 ps~----~ell~hp~~~~  264 (568)
                      +++    .++++|+||..
T Consensus       239 ~~~~~~~~~~~~~~~~~~  256 (321)
T cd05603         239 LGAKADFLEIKNHVFFSP  256 (321)
T ss_pred             CCCCCCHHHHhCCCCcCC
Confidence            975    59999999973


No 88 
>KOG0192|consensus
Probab=100.00  E-value=2.3e-45  Score=371.94  Aligned_cols=247  Identities=27%  Similarity=0.497  Sum_probs=211.8

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcE-EEEEEeecCCcCC-chHHHHHHHHHHHhCCCCCcceeeEEEEeCC-EEEEEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEK-VAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQVIETSS-HIFMVI   85 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~-vavK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~-~~~lV~   85 (568)
                      ...+.+.||+|+||+||+|..+  |+. ||+|++....... ....+.+|+.+|++++|||||++++++.+.. .++|||
T Consensus        42 ~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVt  119 (362)
T KOG0192|consen   42 ELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVT  119 (362)
T ss_pred             HhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEE
Confidence            3455677999999999999975  555 9999998655432 2568999999999999999999999998887 799999


Q ss_pred             eccCCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcC-ceecCCCCCceEEcCCC-CeEEEeecCccCCCCCCc
Q psy6203          86 EYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHHLG-YAHRDLKPENVLLDRNQ-NLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        86 E~~~~g~L~~~i~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~~~-~~kl~DFG~a~~~~~~~~  161 (568)
                      ||+++|+|.+++..  +..++...+..++.||+.|+.|||+++ ||||||||+|||++.++ ++||+|||+++...... 
T Consensus       120 Ey~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~-  198 (362)
T KOG0192|consen  120 EYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK-  198 (362)
T ss_pred             EeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc-
Confidence            99999999999988  678999999999999999999999999 99999999999999998 99999999997654321 


Q ss_pred             cccccccCCccccccccccCc-ccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHH-cCC-CCCCCCCChHHHHH
Q psy6203         162 SQLQTSCGSPNYAAPEVIKGK-QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL-NGK-YTEPPWMSPNSRQI  238 (568)
Q Consensus       162 ~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~-~~~-~~~~~~~~~~~~~l  238 (568)
                      .......||+.|||||++.+. ..|+.|+||||||+++|||+||..||......++...+. .+. +..+...++.+..|
T Consensus       199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l  278 (362)
T KOG0192|consen  199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSL  278 (362)
T ss_pred             ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHH
Confidence            222336799999999999952 447999999999999999999999999888766666654 333 34455689999999


Q ss_pred             HHHccccCcCCCCCHHHHhc
Q psy6203         239 VRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       239 i~~~L~~dP~~Rps~~ell~  258 (568)
                      +.+||..||.+||+..+++.
T Consensus       279 ~~~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  279 MERCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             HHHhCCCCCCcCCCHHHHHH
Confidence            99999999999999999864


No 89 
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00  E-value=1.2e-45  Score=377.97  Aligned_cols=248  Identities=30%  Similarity=0.543  Sum_probs=216.6

Q ss_pred             ecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhC---CCCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHI---SHQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        16 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l---~hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      ||+|+||+||+|++..+|+.||+|++.+....  ........|..++..+   +||||+++++++.+.+.+|+||||+++
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~   80 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG   80 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence            79999999999999999999999999754322  1223444566666655   699999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCC
Q psy6203          91 GELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS  170 (568)
Q Consensus        91 g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt  170 (568)
                      |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... .......+||
T Consensus        81 g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~-~~~~~~~~gt  159 (330)
T cd05586          81 GELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTD-NKTTNTFCGT  159 (330)
T ss_pred             ChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCC-CCCccCccCC
Confidence            999999988889999999999999999999999999999999999999999999999999998753322 1233456799


Q ss_pred             ccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC-CCChHHHHHHHHccccCcCC
Q psy6203         171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP-WMSPNSRQIVRSMLQVEPGK  249 (568)
Q Consensus       171 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~li~~~L~~dP~~  249 (568)
                      +.|+|||++.+...++.++|||||||++|+|++|..||.+.+..+....+..+....+. .+++++.++|++||+.||.+
T Consensus       160 ~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~~P~~  239 (330)
T cd05586         160 TEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNRNPQH  239 (330)
T ss_pred             ccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCCHHH
Confidence            99999999977655789999999999999999999999999888888888887766654 47899999999999999999


Q ss_pred             CC----CHHHHhcCccccc
Q psy6203         250 RI----KIQDLLGHNWVKM  264 (568)
Q Consensus       250 Rp----s~~ell~hp~~~~  264 (568)
                      ||    ++.++++||||+.
T Consensus       240 R~~~~~~~~~ll~h~~~~~  258 (330)
T cd05586         240 RLGAHRDAVELKEHPFFAD  258 (330)
T ss_pred             CCCCCCCHHHHhcCccccC
Confidence            98    7999999999974


No 90 
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00  E-value=4.1e-45  Score=370.43  Aligned_cols=255  Identities=25%  Similarity=0.439  Sum_probs=215.0

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      ++|.+.+.||+|+||.||+|++..+++.||+|.++..........+.+|+.++++++||||+++++++..++..++||||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   85 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY   85 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence            67999999999999999999999999999999997654433444677899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          88 CPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        88 ~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      +++ +|.+.+... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++....... .....
T Consensus        86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~-~~~~~  163 (309)
T cd07872          86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPT-KTYSN  163 (309)
T ss_pred             CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCc-ccccc
Confidence            964 888887654 458999999999999999999999999999999999999999999999999987543221 12234


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC---------------------CC
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG---------------------KY  225 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~---------------------~~  225 (568)
                      ..+|+.|+|||++.+...++.++|||||||++|+|++|++||.+.+..+....+...                     .+
T Consensus       164 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (309)
T cd07872         164 EVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNF  243 (309)
T ss_pred             ccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhc
Confidence            467899999999877655789999999999999999999999887665444333210                     00


Q ss_pred             ---------CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         226 ---------TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       226 ---------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                               ...+.+++++.+||.+||+.||.+|||+.|++.||||+.
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~  291 (309)
T cd07872         244 PKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRS  291 (309)
T ss_pred             CccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhh
Confidence                     011246889999999999999999999999999999984


No 91 
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00  E-value=1.9e-45  Score=382.63  Aligned_cols=256  Identities=30%  Similarity=0.474  Sum_probs=216.1

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCC-----EEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSS-----HIF   82 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~-----~~~   82 (568)
                      +|++.+.||+|+||.||+|.+..+|+.||+|.+...... .....+.+|+.+++.++||||+++++++...+     ..|
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~   80 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY   80 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence            478999999999999999999999999999998654221 23456788999999999999999999998776     789


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc
Q psy6203          83 MVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES  162 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  162 (568)
                      +||||+. ++|.+.+.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.........
T Consensus        81 lv~e~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~  159 (372)
T cd07853          81 VVTELMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESK  159 (372)
T ss_pred             EEeeccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccc
Confidence            9999995 689888888888999999999999999999999999999999999999999999999999998765433223


Q ss_pred             ccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc--------------------
Q psy6203         163 QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN--------------------  222 (568)
Q Consensus       163 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~--------------------  222 (568)
                      ......+|+.|+|||++.+...++.++||||+||++|+|++|+.||.+.+.......+..                    
T Consensus       160 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~  239 (372)
T cd07853         160 HMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAH  239 (372)
T ss_pred             cCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHH
Confidence            334456899999999998866678999999999999999999999988765554443321                    


Q ss_pred             ---CCC---------CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcCcccccC
Q psy6203         223 ---GKY---------TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       223 ---~~~---------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                         ...         ......++++.+||.+||+.||.+|||+.|+|+||||...
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         240 ILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             HHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCC
Confidence               111         1123357889999999999999999999999999999853


No 92 
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00  E-value=6.8e-45  Score=371.66  Aligned_cols=249  Identities=33%  Similarity=0.656  Sum_probs=217.1

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHI-SHQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      +.||+|+||+||+|.+..+++.||+|++.+....  .....+..|+.++.++ +||||+++++++.+.+.+|+||||++|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG   80 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence            4799999999999999999999999999865432  2345677899999888 599999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCC
Q psy6203          91 GELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS  170 (568)
Q Consensus        91 g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt  170 (568)
                      |+|..++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... .......+||
T Consensus        81 ~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~-~~~~~~~~gt  159 (327)
T cd05617          81 GDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGP-GDTTSTFCGT  159 (327)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCC-CCceecccCC
Confidence            999999988889999999999999999999999999999999999999999999999999998753221 1233456799


Q ss_pred             ccccccccccCcccCCcccceechhhHHHHHHhCCCCCCC-------CCHHHHHHHHHcCCCCCCCCCChHHHHHHHHcc
Q psy6203         171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS-------DSIDQLYDKILNGKYTEPPWMSPNSRQIVRSML  243 (568)
Q Consensus       171 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~-------~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L  243 (568)
                      +.|+|||++.+.. ++.++|||||||++|+|++|..||..       .....+...+.......+..++..+.++|.+||
T Consensus       160 ~~y~aPE~~~~~~-~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L  238 (327)
T cd05617         160 PNYIAPEILRGEE-YGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFL  238 (327)
T ss_pred             cccCCHHHHCCCC-CCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHh
Confidence            9999999998766 58999999999999999999999953       233455666667777778889999999999999


Q ss_pred             ccCcCCCCC------HHHHhcCccccc
Q psy6203         244 QVEPGKRIK------IQDLLGHNWVKM  264 (568)
Q Consensus       244 ~~dP~~Rps------~~ell~hp~~~~  264 (568)
                      +.||.+|++      ++++++||||+.
T Consensus       239 ~~dP~~R~~~~~~~~~~~i~~h~~f~~  265 (327)
T cd05617         239 NKDPKERLGCQPQTGFSDIKSHTFFRS  265 (327)
T ss_pred             ccCHHHcCCCCCCCCHHHHHcCCCCCC
Confidence            999999998      579999999974


No 93 
>KOG0667|consensus
Probab=100.00  E-value=2.7e-45  Score=377.65  Aligned_cols=252  Identities=31%  Similarity=0.473  Sum_probs=213.9

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCC-C-----CCcceeeEEEEeC
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS-H-----QHICKLFQVIETS   78 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~-h-----pnIv~l~~~~~~~   78 (568)
                      .+..+|.|.+.||+|+||.|.+|.+..|++.||||+++...  .-..+...|+.+|..|+ |     -|+|+++++|...
T Consensus       183 ~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k--~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr  260 (586)
T KOG0667|consen  183 HIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK--RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR  260 (586)
T ss_pred             eeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh--HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc
Confidence            34558999999999999999999999999999999998654  23445667999999997 4     3899999999999


Q ss_pred             CEEEEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCC--CCeEEEeecCcc
Q psy6203          79 SHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRN--QNLKLIDFGLCA  154 (568)
Q Consensus        79 ~~~~lV~E~~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~--~~~kl~DFG~a~  154 (568)
                      +++|||+|.+ +.+|+++++.++  .++...++.++.||+.||.+||+.||||+|||||||||.+-  ..|||+|||.|.
T Consensus       261 ~HlciVfELL-~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc  339 (586)
T KOG0667|consen  261 NHLCIVFELL-STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSC  339 (586)
T ss_pred             cceeeeehhh-hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccc
Confidence            9999999999 679999998764  58899999999999999999999999999999999999654  369999999998


Q ss_pred             CCCCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC-----------
Q psy6203         155 KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG-----------  223 (568)
Q Consensus       155 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~-----------  223 (568)
                      .....    ..+.+.+..|+|||++.|.+ |+.+.||||||||++||++|.+.|.+++..+.+..|..-           
T Consensus       340 ~~~q~----vytYiQSRfYRAPEVILGlp-Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~  414 (586)
T KOG0667|consen  340 FESQR----VYTYIQSRFYRAPEVILGLP-YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDT  414 (586)
T ss_pred             ccCCc----ceeeeeccccccchhhccCC-CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            76543    23677899999999999998 589999999999999999999999998876665554320           


Q ss_pred             -----------------------------------------CCCCCC-----------CCChHHHHHHHHccccCcCCCC
Q psy6203         224 -----------------------------------------KYTEPP-----------WMSPNSRQIVRSMLQVEPGKRI  251 (568)
Q Consensus       224 -----------------------------------------~~~~~~-----------~~~~~~~~li~~~L~~dP~~Rp  251 (568)
                                                               ....|+           .....+.+||++||.+||.+|+
T Consensus       415 ~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~  494 (586)
T KOG0667|consen  415 AKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERI  494 (586)
T ss_pred             ccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcC
Confidence                                                     000010           0123568999999999999999


Q ss_pred             CHHHHhcCccccc
Q psy6203         252 KIQDLLGHNWVKM  264 (568)
Q Consensus       252 s~~ell~hp~~~~  264 (568)
                      |+.|+|+||||..
T Consensus       495 tp~qal~Hpfl~~  507 (586)
T KOG0667|consen  495 TPAQALNHPFLTG  507 (586)
T ss_pred             CHHHHhcCccccc
Confidence            9999999999984


No 94 
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00  E-value=4.4e-45  Score=364.88  Aligned_cols=247  Identities=30%  Similarity=0.503  Sum_probs=211.9

Q ss_pred             ecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCCCh
Q psy6203          16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGEL   93 (568)
Q Consensus        16 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g~L   93 (568)
                      ||+|+||+||+|.+..+|+.||+|.+.+.....  ....+..|+.+++.++||||+++.+++...+..|+||||+++|+|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L   80 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL   80 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence            799999999999999999999999987643322  234667899999999999999999999999999999999999999


Q ss_pred             HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccC
Q psy6203          94 LDHIVE----RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCG  169 (568)
Q Consensus        94 ~~~i~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~g  169 (568)
                      .+.+..    ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++....... .......|
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~-~~~~~~~g  159 (280)
T cd05608          81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ-SKTKGYAG  159 (280)
T ss_pred             HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC-ccccccCC
Confidence            888743    3568999999999999999999999999999999999999999999999999987544322 22334578


Q ss_pred             CccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCC----HHHHHHHHHcCCCCCCCCCChHHHHHHHHcccc
Q psy6203         170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV  245 (568)
Q Consensus       170 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~  245 (568)
                      |+.|+|||++.+.. ++.++|||||||++|+|++|+.||....    .......+.......+..+++.+.+++.+||+.
T Consensus       160 ~~~y~aPE~~~~~~-~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  238 (280)
T cd05608         160 TPGFMAPELLQGEE-YDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAK  238 (280)
T ss_pred             CcCccCHHHhcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcC
Confidence            99999999998776 5889999999999999999999997643    233444455555556677899999999999999


Q ss_pred             CcCCCC-----CHHHHhcCccccc
Q psy6203         246 EPGKRI-----KIQDLLGHNWVKM  264 (568)
Q Consensus       246 dP~~Rp-----s~~ell~hp~~~~  264 (568)
                      ||++||     |++++++||||+.
T Consensus       239 ~P~~R~~~~~~~~~~~l~h~~~~~  262 (280)
T cd05608         239 DPEKRLGFRDGNCDGLRTHPLFRD  262 (280)
T ss_pred             CHHHhcCCCCCCHHHHhcChhhhc
Confidence            999999     8899999999985


No 95 
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, 
Probab=100.00  E-value=1e-44  Score=363.19  Aligned_cols=253  Identities=25%  Similarity=0.439  Sum_probs=217.9

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      .|++.+.||+|+||+||++.+..+++.||+|++.......  ....+.+|+.+++.++||||+++++.+...+..++|||
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   80 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence            5899999999999999999999999999999997644322  22356779999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          87 YCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        87 ~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |+++|+|.+++...  ..+++..+..++.|++.||.|||+.||+||||||+||++++++.++|+|||++......  ...
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--~~~  158 (285)
T cd05605          81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG--ETI  158 (285)
T ss_pred             ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC--Ccc
Confidence            99999999888653  46899999999999999999999999999999999999999999999999998764332  122


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHH----HHHHHHcCCCCCCCCCChHHHHHHH
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQ----LYDKILNGKYTEPPWMSPNSRQIVR  240 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~li~  240 (568)
                      ...+|++.|+|||++.+.. ++.++||||+||++|+|++|..||.+.+...    +...+.......+..+++.+.+||.
T Consensus       159 ~~~~~~~~y~aPE~~~~~~-~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  237 (285)
T cd05605         159 RGRVGTVGYMAPEVVKNER-YTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICR  237 (285)
T ss_pred             ccccCCCCccCcHHhcCCC-CCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHH
Confidence            3457899999999998765 5889999999999999999999998765433    3334444455556678999999999


Q ss_pred             HccccCcCCCC-----CHHHHhcCccccc
Q psy6203         241 SMLQVEPGKRI-----KIQDLLGHNWVKM  264 (568)
Q Consensus       241 ~~L~~dP~~Rp-----s~~ell~hp~~~~  264 (568)
                      +||+.||.+||     ++++++.||||..
T Consensus       238 ~~l~~~P~~R~~~~~~~~~~l~~~~~~~~  266 (285)
T cd05605         238 QLLTKDPGFRLGCRGEGAEEVKAHPFFRT  266 (285)
T ss_pred             HHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence            99999999999     9999999999984


No 96 
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00  E-value=1.4e-44  Score=370.10  Aligned_cols=257  Identities=29%  Similarity=0.553  Sum_probs=219.3

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++.++||+|+||.||+++++.+++.||+|++.+....  .....+..|+.++..++|+||+++++.+.+.+.+|+||
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM   80 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence            5799999999999999999999999999999998753221  22345778999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          86 EYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        86 E~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      ||+++|+|.+++.+ ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...........
T Consensus        81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~  160 (332)
T cd05623          81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQS  160 (332)
T ss_pred             eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCccee
Confidence            99999999999976 46799999999999999999999999999999999999999999999999999875433222223


Q ss_pred             ccccCCccccccccccC----cccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--CCC---CCCChHH
Q psy6203         165 QTSCGSPNYAAPEVIKG----KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY--TEP---PWMSPNS  235 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~----~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~--~~~---~~~~~~~  235 (568)
                      ...+||+.|+|||++.+    ...++.++|||||||++|+|++|+.||...+..+....+.....  ..+   ..+++++
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~  240 (332)
T cd05623         161 SVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDA  240 (332)
T ss_pred             cccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHH
Confidence            34579999999999863    33468899999999999999999999999888888888766532  222   3478999


Q ss_pred             HHHHHHccccCcCC--CCCHHHHhcCccccc
Q psy6203         236 RQIVRSMLQVEPGK--RIKIQDLLGHNWVKM  264 (568)
Q Consensus       236 ~~li~~~L~~dP~~--Rps~~ell~hp~~~~  264 (568)
                      ++||++||..++.+  |++++|+++||||..
T Consensus       241 ~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~  271 (332)
T cd05623         241 KDLIRRLICSREHRLGQNGIEDFKQHPFFTG  271 (332)
T ss_pred             HHHHHHHccChhhhcCCCCHHHHhCCCCcCC
Confidence            99999999765554  789999999999974


No 97 
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00  E-value=7.2e-45  Score=385.18  Aligned_cols=250  Identities=27%  Similarity=0.393  Sum_probs=206.4

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeC--------
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETS--------   78 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~--------   78 (568)
                      .++|++++.||+|+||.||+|.+..+++.||||++....     ....+|+.+|+.++||||+++++++...        
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~  139 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN  139 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence            457999999999999999999999999999999885432     2345799999999999999999887432        


Q ss_pred             CEEEEEEeccCCCChHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCC-CeEEEeecCc
Q psy6203          79 SHIFMVIEYCPGGELLDHIV----ERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQ-NLKLIDFGLC  153 (568)
Q Consensus        79 ~~~~lV~E~~~~g~L~~~i~----~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-~~kl~DFG~a  153 (568)
                      ..+++||||+++ +|.+++.    ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+|
T Consensus       140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla  218 (440)
T PTZ00036        140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSA  218 (440)
T ss_pred             eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccc
Confidence            247799999964 6776664    346799999999999999999999999999999999999998665 6999999999


Q ss_pred             cCCCCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC--C-------
Q psy6203         154 AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--K-------  224 (568)
Q Consensus       154 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~--~-------  224 (568)
                      +......  .....+||+.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+....+...  .       
T Consensus       219 ~~~~~~~--~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~  296 (440)
T PTZ00036        219 KNLLAGQ--RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLK  296 (440)
T ss_pred             hhccCCC--CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence            8654321  2234578999999999887666799999999999999999999999887655444433221  0       


Q ss_pred             --------C------------CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         225 --------Y------------TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       225 --------~------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                              .            ..+...++++.+||.+||++||.+|||+.|+|.||||..
T Consensus       297 ~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~  356 (440)
T PTZ00036        297 EMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDD  356 (440)
T ss_pred             HhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHh
Confidence                    0            012346789999999999999999999999999999974


No 98 
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00  E-value=1.6e-44  Score=369.54  Aligned_cols=257  Identities=29%  Similarity=0.553  Sum_probs=219.3

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++.+.||+|+||.||++++..+++.||+|++.+....  .....+..|+.++..++|+||+++++++.+.+..|+||
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~   80 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM   80 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence            5899999999999999999999999999999999753221  22345778999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          86 EYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        86 E~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      ||++||+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++...........
T Consensus        81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~  160 (331)
T cd05624          81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQS  160 (331)
T ss_pred             eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceee
Confidence            99999999999987 46799999999999999999999999999999999999999999999999999876543322223


Q ss_pred             ccccCCccccccccccCc----ccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CCCC---CCCChHH
Q psy6203         165 QTSCGSPNYAAPEVIKGK----QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK--YTEP---PWMSPNS  235 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~----~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~--~~~~---~~~~~~~  235 (568)
                      ...+||+.|+|||++.+.    ..++.++|||||||++|+|++|+.||...+..+....+....  ...+   ..+++++
T Consensus       161 ~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~  240 (331)
T cd05624         161 SVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEA  240 (331)
T ss_pred             ccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHH
Confidence            345799999999998752    235789999999999999999999999888877777776543  2223   2368999


Q ss_pred             HHHHHHccccCcCC--CCCHHHHhcCccccc
Q psy6203         236 RQIVRSMLQVEPGK--RIKIQDLLGHNWVKM  264 (568)
Q Consensus       236 ~~li~~~L~~dP~~--Rps~~ell~hp~~~~  264 (568)
                      +++|.+||..++.+  |++++++++||||..
T Consensus       241 ~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~  271 (331)
T cd05624         241 KDLIQRLICSRERRLGQNGIEDFKKHAFFEG  271 (331)
T ss_pred             HHHHHHHccCchhhcCCCCHHHHhcCCCcCC
Confidence            99999999976654  579999999999974


No 99 
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00  E-value=1e-44  Score=371.19  Aligned_cols=255  Identities=22%  Similarity=0.365  Sum_probs=216.1

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ..++|++.++||+|+||.||+|.+..++..+|+|++...........+.+|++++++++||||+++++++.+.+..|+||
T Consensus         3 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   82 (333)
T cd06650           3 KDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICM   82 (333)
T ss_pred             chhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEE
Confidence            35789999999999999999999999999999999876432233456889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc-CceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL-GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      ||+++++|.+++...+.+++..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+|||++......   ..
T Consensus        83 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~---~~  159 (333)
T cd06650          83 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MA  159 (333)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh---cc
Confidence            9999999999998888899999999999999999999985 7999999999999999999999999998754322   22


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHH-------------------------
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDK-------------------------  219 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~-------------------------  219 (568)
                      ....|++.|+|||++.+.. ++.++|||||||++|+|++|..||.......+...                         
T Consensus       160 ~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (333)
T cd06650         160 NSFVGTRSYMSPERLQGTH-YSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPL  238 (333)
T ss_pred             ccCCCCccccCHHHhcCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchh
Confidence            3456899999999998765 58899999999999999999999976544333211                         


Q ss_pred             -------------------HHcCCCC-CC-CCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         220 -------------------ILNGKYT-EP-PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       220 -------------------i~~~~~~-~~-~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                                         +.....+ .+ ...++++++||.+||+.||++|||+.|++.||||+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~  304 (333)
T cd06650         239 SSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKR  304 (333)
T ss_pred             hhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhc
Confidence                               1111111 11 125678999999999999999999999999999984


No 100
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00  E-value=1.8e-44  Score=362.19  Aligned_cols=251  Identities=25%  Similarity=0.367  Sum_probs=206.7

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcC-CCcEEEEEEeecCCcCC-chHHHHHHHHHHHhC---CCCCcceeeEEEE-----e
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVL-TGEKVAIKIMKKATLGE-DLPRVKLEINALKHI---SHQHICKLFQVIE-----T   77 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~Ei~~l~~l---~hpnIv~l~~~~~-----~   77 (568)
                      ++|++.+.||+|+||+||+|++.. +|..||+|++......+ ......+|+.+++.+   +||||+++++++.     .
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            479999999999999999999865 46889999987654332 233456677777765   6999999999885     3


Q ss_pred             CCEEEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccC
Q psy6203          78 SSHIFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAK  155 (568)
Q Consensus        78 ~~~~~lV~E~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~  155 (568)
                      ...+++||||++ ++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus        81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~  159 (290)
T cd07862          81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARI  159 (290)
T ss_pred             CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEe
Confidence            456899999995 6899888653  4589999999999999999999999999999999999999999999999999876


Q ss_pred             CCCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-C--------
Q psy6203         156 PEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY-T--------  226 (568)
Q Consensus       156 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~-~--------  226 (568)
                      ....  .......||+.|+|||++.+.. ++.++|||||||++|+|++|.+||.+.+..+....+..... +        
T Consensus       160 ~~~~--~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~  236 (290)
T cd07862         160 YSFQ--MALTSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRD  236 (290)
T ss_pred             ccCC--cccccccccccccChHHHhCCC-CCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhh
Confidence            4432  2334557899999999997765 58899999999999999999999998776665555543210 0        


Q ss_pred             ------------------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         227 ------------------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       227 ------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                                        ..+.+++.+++||.+||+.||++|||+.|+|+||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         237 VALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             hcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence                              012467788999999999999999999999999997


No 101
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00  E-value=8.5e-45  Score=375.02  Aligned_cols=252  Identities=28%  Similarity=0.433  Sum_probs=210.4

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|++...........+.+|+.+++.++|+||+++++++...+.+|+||||
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  153 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF  153 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence            57889999999999999999999999999999987544333345688999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccc
Q psy6203          88 CPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS  167 (568)
Q Consensus        88 ~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~  167 (568)
                      +++++|.+.    ...++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... ......
T Consensus       154 ~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~~~~  228 (353)
T PLN00034        154 MDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM-DPCNSS  228 (353)
T ss_pred             CCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccc-cccccc
Confidence            999998643    346788889999999999999999999999999999999999999999999987654321 122345


Q ss_pred             cCCccccccccccC----cccCCcccceechhhHHHHHHhCCCCCCCCC---HHHHHHHHHcC-CCCCCCCCChHHHHHH
Q psy6203         168 CGSPNYAAPEVIKG----KQYYGSETDVWSMGVMLYALLCGFLPFDSDS---IDQLYDKILNG-KYTEPPWMSPNSRQIV  239 (568)
Q Consensus       168 ~gt~~y~aPE~l~~----~~~~~~~~DiwSlG~il~~lltG~~pf~~~~---~~~~~~~i~~~-~~~~~~~~~~~~~~li  239 (568)
                      .||..|+|||++..    ..+.+.++|||||||++|+|++|+.||....   ...+...+... ....+..+++++.+||
T Consensus       229 ~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li  308 (353)
T PLN00034        229 VGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFI  308 (353)
T ss_pred             ccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHH
Confidence            79999999998743    2334568999999999999999999997433   22333333222 3334556889999999


Q ss_pred             HHccccCcCCCCCHHHHhcCccccc
Q psy6203         240 RSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       240 ~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      .+||+.||++|||+.|+++||||..
T Consensus       309 ~~~l~~~P~~Rpt~~ell~hp~~~~  333 (353)
T PLN00034        309 SCCLQREPAKRWSAMQLLQHPFILR  333 (353)
T ss_pred             HHHccCChhhCcCHHHHhcCccccc
Confidence            9999999999999999999999984


No 102
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00  E-value=6.1e-44  Score=352.79  Aligned_cols=254  Identities=30%  Similarity=0.491  Sum_probs=219.3

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC----chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE----DLPRVKLEINALKHISHQHICKLFQVIETSSHIFM   83 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~----~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l   83 (568)
                      +.|++.+.||+|++|.||+|.+..+++.||+|.+.......    ....+.+|+.++++++||||+++++++.+.+..++
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            57999999999999999999999999999999987543321    23467889999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          84 VIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      ||||+++++|.+.+...+.+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++..........
T Consensus        82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~  161 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG  161 (263)
T ss_pred             EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccccc
Confidence            99999999999999888889999999999999999999999999999999999999999999999999987543221111


Q ss_pred             c--ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCCCCCChHHHHHH
Q psy6203         164 L--QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--KYTEPPWMSPNSRQIV  239 (568)
Q Consensus       164 ~--~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li  239 (568)
                      .  ....|+..|+|||++.+.. ++.++||||||+++|+|++|+.||...+.......+...  ....+..++..+.++|
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  240 (263)
T cd06625         162 TGMKSVTGTPYWMSPEVISGEG-YGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFL  240 (263)
T ss_pred             ccccCCCcCccccCcceeccCC-CCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHH
Confidence            1  3346788999999998776 689999999999999999999999776555444444333  3345567889999999


Q ss_pred             HHccccCcCCCCCHHHHhcCccc
Q psy6203         240 RSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       240 ~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                      .+||..+|.+|||+.|+++||||
T Consensus       241 ~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         241 RRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHHhhcCcccCCCHHHHhhCCCC
Confidence            99999999999999999999997


No 103
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00  E-value=4.1e-44  Score=361.72  Aligned_cols=255  Identities=25%  Similarity=0.439  Sum_probs=215.2

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+...........+.+|+.+++.++||||+++++++...+..++||||
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~   85 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY   85 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence            67999999999999999999999999999999987654433445677899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          88 CPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        88 ~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      ++ ++|.+.+... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++....... .....
T Consensus        86 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~  163 (301)
T cd07873          86 LD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPT-KTYSN  163 (301)
T ss_pred             cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC-Ccccc
Confidence            96 5888888653 568999999999999999999999999999999999999999999999999987543221 12233


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC-------------------CCCC
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG-------------------KYTE  227 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~-------------------~~~~  227 (568)
                      ..+++.|+|||++.+...++.++|||||||++|+|++|++||...+..+....+...                   ....
T Consensus       164 ~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (301)
T cd07873         164 EVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNY  243 (301)
T ss_pred             cceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccccccccc
Confidence            457899999999877665788999999999999999999999887765544333211                   0000


Q ss_pred             -----------CCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         228 -----------PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       228 -----------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                                 .+.+++.+++||.+||+.||.+|||++|+++||||..
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~  291 (301)
T cd07873         244 PKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHC  291 (301)
T ss_pred             CccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence                       1246788999999999999999999999999999973


No 104
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00  E-value=5.9e-44  Score=369.67  Aligned_cols=254  Identities=26%  Similarity=0.465  Sum_probs=207.7

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCC----
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSS----   79 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~----   79 (568)
                      .+.++|++.+.||+|+||.||+|.+..+|..||+|++...... .....+.+|+.+++.++||||+++++++...+    
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   97 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEE   97 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccc
Confidence            4568999999999999999999999999999999998754322 23456778999999999999999999986443    


Q ss_pred             --EEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCC
Q psy6203          80 --HIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPE  157 (568)
Q Consensus        80 --~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  157 (568)
                        .+|+||||+++ +|.+.+.  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus        98 ~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~  174 (359)
T cd07876          98 FQDVYLVMELMDA-NLCQVIH--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAC  174 (359)
T ss_pred             cceeEEEEeCCCc-CHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccc
Confidence              57999999965 5666653  358899999999999999999999999999999999999999999999999987543


Q ss_pred             CCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc---------------
Q psy6203         158 GGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN---------------  222 (568)
Q Consensus       158 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~---------------  222 (568)
                      ..  .......||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+.......+..               
T Consensus       175 ~~--~~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (359)
T cd07876         175 TN--FMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQP  251 (359)
T ss_pred             cC--ccCCCCcccCCCCCchhccCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHH
Confidence            32  2234457899999999998766 58899999999999999999999987654332221110               


Q ss_pred             -------CCCC--------------------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         223 -------GKYT--------------------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       223 -------~~~~--------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                             ....                    .....++.+++||.+||+.||++|||+.|+|+||||..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         252 TVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             HHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence                   0000                    01123578899999999999999999999999999974


No 105
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is 
Probab=100.00  E-value=1.4e-44  Score=371.99  Aligned_cols=254  Identities=25%  Similarity=0.454  Sum_probs=211.5

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeC-----
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETS-----   78 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~-----   78 (568)
                      ++.++|++.+.||+|+||+||+|.+..+++.||+|++...... .....+.+|+.++++++||||+++++++...     
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIEN   91 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccc
Confidence            5678999999999999999999999999999999998754322 2234567899999999999999999987543     


Q ss_pred             -CEEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCC
Q psy6203          79 -SHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPE  157 (568)
Q Consensus        79 -~~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  157 (568)
                       ...|++||++ +++|.+++. ...+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus        92 ~~~~~~~~~~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~  169 (343)
T cd07878          92 FNEVYLVTNLM-GADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD  169 (343)
T ss_pred             cCcEEEEeecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecC
Confidence             4579999998 788887764 4679999999999999999999999999999999999999999999999999987654


Q ss_pred             CCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC-------------
Q psy6203         158 GGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK-------------  224 (568)
Q Consensus       158 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~-------------  224 (568)
                      .    .....+||+.|+|||++.+...++.++|||||||++|+|++|..||.+.+..+....+....             
T Consensus       170 ~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (343)
T cd07878         170 D----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISS  245 (343)
T ss_pred             C----CcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcch
Confidence            3    22345789999999999875557899999999999999999999998766544433332110             


Q ss_pred             ---------C-CC--------CCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         225 ---------Y-TE--------PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       225 ---------~-~~--------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                               . ..        ....++.+.+||.+||+.||.+|||+.|+|+||||..
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~  303 (343)
T cd07878         246 EHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ  303 (343)
T ss_pred             hhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence                     0 00        0124667899999999999999999999999999984


No 106
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00  E-value=7.8e-44  Score=357.70  Aligned_cols=252  Identities=37%  Similarity=0.730  Sum_probs=228.8

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++.+.||+|+||.||++.+..+++.||+|++......  .....+.+|++++++++||||+++++++.+.+..|+||
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM   80 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence            5799999999999999999999999999999998764432  23456888999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      ||+++++|.+++...+.+++..+..++.||+.||.|||++||+|+||+|+||+++.++.+||+|||++......    ..
T Consensus        81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~----~~  156 (290)
T cd05580          81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR----TY  156 (290)
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC----CC
Confidence            99999999999988889999999999999999999999999999999999999999999999999998765433    23


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHcccc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV  245 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~  245 (568)
                      ..+|++.|+|||.+.+.. .+.++||||||+++|+|++|..||...+.....+.+..+....+...++.++++|.+||..
T Consensus       157 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  235 (290)
T cd05580         157 TLCGTPEYLAPEIILSKG-YGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPSFFSPDAKDLIRNLLQV  235 (290)
T ss_pred             CCCCCccccChhhhcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCccCCHHHHHHHHHHccC
Confidence            456899999999987765 5889999999999999999999998888777888888888888888899999999999999


Q ss_pred             CcCCCC-----CHHHHhcCccccc
Q psy6203         246 EPGKRI-----KIQDLLGHNWVKM  264 (568)
Q Consensus       246 dP~~Rp-----s~~ell~hp~~~~  264 (568)
                      ||.+|+     +++|+++||||..
T Consensus       236 ~p~~R~~~~~~~~~~l~~~~~~~~  259 (290)
T cd05580         236 DLTKRLGNLKNGVNDIKNHPWFAG  259 (290)
T ss_pred             CHHHccCcccCCHHHHHcCccccc
Confidence            999999     9999999999974


No 107
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00  E-value=4.1e-44  Score=383.99  Aligned_cols=259  Identities=32%  Similarity=0.539  Sum_probs=225.0

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCC----
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSS----   79 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~----   79 (568)
                      ...++|++.+.||+|+||+||+|++..+|+.||||++...... .....+.+|+.++..++|+||+++++.+...+    
T Consensus        29 ~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~  108 (496)
T PTZ00283         29 EQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNP  108 (496)
T ss_pred             ccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCc
Confidence            3458999999999999999999999999999999999765443 23456788999999999999999988775332    


Q ss_pred             ----EEEEEEeccCCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeec
Q psy6203          80 ----HIFMVIEYCPGGELLDHIVER----QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFG  151 (568)
Q Consensus        80 ----~~~lV~E~~~~g~L~~~i~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG  151 (568)
                          .+++||||+++|+|.+++..+    ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||
T Consensus       109 ~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFG  188 (496)
T PTZ00283        109 ENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFG  188 (496)
T ss_pred             ccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecc
Confidence                378999999999999998653    468999999999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCC-ccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-CCC
Q psy6203         152 LCAKPEGGL-ESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPP  229 (568)
Q Consensus       152 ~a~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~-~~~  229 (568)
                      +++...... .......+||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..++...+..+... .++
T Consensus       189 ls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~-~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~~~~  267 (496)
T PTZ00283        189 FSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKP-YSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPP  267 (496)
T ss_pred             cCeeccccccccccccccCCcceeCHHHhCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCC
Confidence            987643321 12234567999999999998766 589999999999999999999999999988888888776553 566


Q ss_pred             CCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         230 WMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       230 ~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      .+++++.+++.+||+.||.+|||+.++++|||++.
T Consensus       268 ~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        268 SISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             CCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence            78999999999999999999999999999999874


No 108
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00  E-value=6e-44  Score=382.33  Aligned_cols=255  Identities=29%  Similarity=0.482  Sum_probs=222.5

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCC-CcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLT-GEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      ..|.+.+.||+|++|.||+|.+..+ +..||+|.+.... ......+.+|+.+|+.++||||+++++++...+..|||||
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E  145 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND-ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME  145 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence            3499999999999999999998887 7889999765432 1233467789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc-
Q psy6203          87 YCPGGELLDHIVE----RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE-  161 (568)
Q Consensus        87 ~~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-  161 (568)
                      |++||+|.+++..    ..++++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........ 
T Consensus       146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~  225 (478)
T PTZ00267        146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSL  225 (478)
T ss_pred             CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcccc
Confidence            9999999988754    35689999999999999999999999999999999999999999999999999886543221 


Q ss_pred             cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-CCCCCChHHHHHHH
Q psy6203         162 SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNSRQIVR  240 (568)
Q Consensus       162 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~li~  240 (568)
                      ......+||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+..++...+..+... .+..+++++.++|.
T Consensus       226 ~~~~~~~gt~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~  304 (478)
T PTZ00267        226 DVASSFCGTPYYLAPELWERKR-YSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVSSGMKALLD  304 (478)
T ss_pred             ccccccCCCccccCHhHhCCCC-CCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCccCCHHHHHHHH
Confidence            1234567999999999998765 589999999999999999999999998888888888777654 45568899999999


Q ss_pred             HccccCcCCCCCHHHHhcCccccc
Q psy6203         241 SMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       241 ~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      +||..||++|||+.+++.|+|++.
T Consensus       305 ~~L~~dP~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        305 PLLSKNPALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             HHhccChhhCcCHHHHHhCHHHHH
Confidence            999999999999999999999973


No 109
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00  E-value=7.7e-44  Score=369.52  Aligned_cols=254  Identities=25%  Similarity=0.438  Sum_probs=209.8

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeC-----
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETS-----   78 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~-----   78 (568)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||++...... .....+.+|+.+++.++||||+++++++...     
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~  100 (364)
T cd07875          21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEE  100 (364)
T ss_pred             chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccc
Confidence            3568999999999999999999999999999999998754322 2345677899999999999999999987543     


Q ss_pred             -CEEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCC
Q psy6203          79 -SHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPE  157 (568)
Q Consensus        79 -~~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  157 (568)
                       ..+|+||||+++ +|.+.+.  ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus       101 ~~~~~lv~e~~~~-~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~  177 (364)
T cd07875         101 FQDVYIVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  177 (364)
T ss_pred             cCeEEEEEeCCCC-CHHHHHH--hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccC
Confidence             357999999964 6777764  358899999999999999999999999999999999999999999999999987654


Q ss_pred             CCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC------------
Q psy6203         158 GGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY------------  225 (568)
Q Consensus       158 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~------------  225 (568)
                      ..  .......||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+....+.....            
T Consensus       178 ~~--~~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (364)
T cd07875         178 TS--FMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQP  254 (364)
T ss_pred             CC--CcccCCcccCCcCCHHHHhCCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhH
Confidence            32  2234457899999999998766 58899999999999999999999988766554444322100            


Q ss_pred             ----------C--------------------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         226 ----------T--------------------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       226 ----------~--------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                                .                    .....+..+++||.+||+.||.+|||++|+|+||||..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         255 TVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             HHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence                      0                    00113467899999999999999999999999999973


No 110
>PF00069 Pkinase:  Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain;  InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00  E-value=1.2e-44  Score=356.86  Aligned_cols=252  Identities=38%  Similarity=0.688  Sum_probs=213.0

Q ss_pred             eEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCc-hHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEecc
Q psy6203          10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYC   88 (568)
Q Consensus        10 Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~   88 (568)
                      |++++.||+|+||+||++.+..+++.||+|++........ .....+|+.++++++||||+++++++......++||||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~   80 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC   80 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            8999999999999999999999999999999987654322 123355999999999999999999999999999999999


Q ss_pred             CCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccccc
Q psy6203          89 PGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSC  168 (568)
Q Consensus        89 ~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  168 (568)
                      ++++|.+++.....+++..+..++.||+.||.+||++||+|+||||+||+++.++.++|+|||.+..... .........
T Consensus        81 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~-~~~~~~~~~  159 (260)
T PF00069_consen   81 PGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE-NNENFNPFV  159 (260)
T ss_dssp             TTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTS-TTSEBSSSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccc
Confidence            9999999999888999999999999999999999999999999999999999999999999999875311 123445567


Q ss_pred             CCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCH---HHHHHHHHcCCCCC----CCCCChHHHHHHHH
Q psy6203         169 GSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSI---DQLYDKILNGKYTE----PPWMSPNSRQIVRS  241 (568)
Q Consensus       169 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~---~~~~~~i~~~~~~~----~~~~~~~~~~li~~  241 (568)
                      +++.|+|||++.....++.++||||||+++|+|++|..||.....   ..............    ....++.+.++|.+
T Consensus       160 ~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  239 (260)
T PF00069_consen  160 GTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKK  239 (260)
T ss_dssp             SSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHH
Confidence            899999999998333468999999999999999999999988732   23333332221111    11224899999999


Q ss_pred             ccccCcCCCCCHHHHhcCccc
Q psy6203         242 MLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       242 ~L~~dP~~Rps~~ell~hp~~  262 (568)
                      ||+.||++|||+.++++||||
T Consensus       240 ~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  240 MLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             HSSSSGGGSTTHHHHHTSGGG
T ss_pred             HccCChhHCcCHHHHhcCCCC
Confidence            999999999999999999997


No 111
>KOG0197|consensus
Probab=100.00  E-value=2e-44  Score=363.77  Aligned_cols=245  Identities=28%  Similarity=0.455  Sum_probs=214.4

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEecc
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYC   88 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~   88 (568)
                      .+++++.||+|.||.||+|..+.+ ..||+|.++.....  .+.+.+|+++|++|+|+|||++++++..++.+||||||+
T Consensus       207 ~l~l~~~LG~G~FG~V~~g~~~~~-~~vavk~ik~~~m~--~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m  283 (468)
T KOG0197|consen  207 ELKLIRELGSGQFGEVWLGKWNGS-TKVAVKTIKEGSMS--PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYM  283 (468)
T ss_pred             HHHHHHHhcCCccceEEEEEEcCC-CcccceEEeccccC--hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEec
Confidence            345678899999999999998633 47999999876543  346779999999999999999999999988999999999


Q ss_pred             CCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          89 PGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        89 ~~g~L~~~i~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      +.|+|.+++..  +..++..+...++.||++|++||+++++|||||-..|||++++..+||+|||+|+....+.......
T Consensus       284 ~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~  363 (468)
T KOG0197|consen  284 PKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEG  363 (468)
T ss_pred             ccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCC
Confidence            99999999987  5679999999999999999999999999999999999999999999999999999544432222222


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCChHHHHHHHHccc
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-TEPPWMSPNSRQIVRSMLQ  244 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~L~  244 (568)
                      .--...|.|||.+.... ++.+||||||||+||||+| |+.|+.+.+..++.+.+.+|.. +.|+.+|+++-+++..|+.
T Consensus       364 ~kfPIkWtAPEa~~~~~-FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP~~vY~lM~~CW~  442 (468)
T KOG0197|consen  364 GKFPIKWTAPEALNYGK-FSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCPDEVYELMKSCWH  442 (468)
T ss_pred             CCCCceecCHHHHhhCC-cccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCCHHHHHHHHHHhh
Confidence            22355799999998776 6999999999999999999 9999999999999999999854 5677899999999999999


Q ss_pred             cCcCCCCCHHHHh
Q psy6203         245 VEPGKRIKIQDLL  257 (568)
Q Consensus       245 ~dP~~Rps~~ell  257 (568)
                      .+|++|||++.+.
T Consensus       443 ~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  443 EDPEDRPTFETLR  455 (468)
T ss_pred             CCcccCCCHHHHH
Confidence            9999999999664


No 112
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00  E-value=1.3e-43  Score=355.42  Aligned_cols=250  Identities=27%  Similarity=0.393  Sum_probs=205.3

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC-chHHHHHHHHHHHhC---CCCCcceeeEEEEe-----CC
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHI---SHQHICKLFQVIET-----SS   79 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~Ei~~l~~l---~hpnIv~l~~~~~~-----~~   79 (568)
                      +|++.+.||+|+||+||+|+++.+|+.||+|.++...... ......+|+.+++.+   +||||+++++++..     ..
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~   80 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET   80 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence            5999999999999999999999999999999987643322 223455677777665   79999999998864     34


Q ss_pred             EEEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCC
Q psy6203          80 HIFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPE  157 (568)
Q Consensus        80 ~~~lV~E~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  157 (568)
                      ..++||||+. ++|.+++...  ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus        81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~  159 (288)
T cd07863          81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYS  159 (288)
T ss_pred             eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcccccc
Confidence            6899999996 5888888654  358999999999999999999999999999999999999999999999999987654


Q ss_pred             CCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC--------------
Q psy6203         158 GGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--------------  223 (568)
Q Consensus       158 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~--------------  223 (568)
                      ..  .......||+.|+|||++.+.. ++.++||||+||++|+|++|.+||.+.+.......+...              
T Consensus       160 ~~--~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (288)
T cd07863         160 CQ--MALTPVVVTLWYRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVT  236 (288)
T ss_pred             Cc--ccCCCccccccccCchHhhCCC-CCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCccccc
Confidence            32  1223456899999999998766 689999999999999999999999877665544443221              


Q ss_pred             ----CC---------CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         224 ----KY---------TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       224 ----~~---------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                          .+         ...+.++..+.++|.+||++||.+|||+.|++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         237 LPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             ccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                00         0112467788999999999999999999999999998


No 113
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00  E-value=1.6e-43  Score=391.98  Aligned_cols=191  Identities=25%  Similarity=0.409  Sum_probs=165.3

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      .++|.+.++||+|+||+||+|.+..+++.||||++.......  ....+..|+.+++.++||||+++++++...+.+|+|
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV   82 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV   82 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence            378999999999999999999999999999999997654322  235678899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          85 IEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |||+.|++|.+++...+.+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... ....
T Consensus        83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~~~-~~~~  161 (669)
T cd05610          83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNR-ELNM  161 (669)
T ss_pred             EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCccccCC-cccc
Confidence            999999999999988888999999999999999999999999999999999999999999999999999865432 2233


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHH
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVML  198 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il  198 (568)
                      ....+|+.|++||.......-...+++||+|.-.
T Consensus       162 ~~~~~t~~~~~pe~~~~~~~~~~~s~~~s~g~~~  195 (669)
T cd05610         162 MDILTTPSMAKPKNDYSRTPGQVLSLISSLGFNT  195 (669)
T ss_pred             cccccCccccCccccccCCCCceeeeeeecCcCC
Confidence            4567899999999875544445567889988543


No 114
>KOG0612|consensus
Probab=100.00  E-value=1.7e-45  Score=394.76  Aligned_cols=259  Identities=32%  Similarity=0.588  Sum_probs=233.0

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      .++|.|+++||+|+||.|.+++++.|++.||+|++.+-..-  .+..-|..|-.+|..-+.+-|++++-.|++++++|+|
T Consensus        74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlV  153 (1317)
T KOG0612|consen   74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLV  153 (1317)
T ss_pred             HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEE
Confidence            36899999999999999999999999999999999874322  2345677889999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          85 IEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |||++||+|..++.+..+++++.++.++..|+.||.-||+.|+|||||||+|||+|..|++||+|||.|-....+..-..
T Consensus       154 MdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s  233 (1317)
T KOG0612|consen  154 MDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRS  233 (1317)
T ss_pred             EecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEe
Confidence            99999999999999888999999999999999999999999999999999999999999999999999887775555566


Q ss_pred             ccccCCcccccccccc----CcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCC--CCCChHHH
Q psy6203         165 QTSCGSPNYAAPEVIK----GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--KYTEP--PWMSPNSR  236 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~----~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~--~~~~~--~~~~~~~~  236 (568)
                      ...+|||.|+|||+++    +...|++.+|.||+||++|||+.|..||..++..+.+.+|.+-  .+.+|  ..+|++++
T Consensus       234 ~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeak  313 (1317)
T KOG0612|consen  234 SVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAK  313 (1317)
T ss_pred             ccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHH
Confidence            7779999999999995    2245799999999999999999999999999999999999876  45555  55999999


Q ss_pred             HHHHHccccCcCCCCC---HHHHhcCcccccCC
Q psy6203         237 QIVRSMLQVEPGKRIK---IQDLLGHNWVKMGP  266 (568)
Q Consensus       237 ~li~~~L~~dP~~Rps---~~ell~hp~~~~~~  266 (568)
                      +||.+++. +|+.|..   ++++..||||...+
T Consensus       314 dLI~~ll~-~~e~RLgrngiedik~HpFF~g~~  345 (1317)
T KOG0612|consen  314 DLIEALLC-DREVRLGRNGIEDIKNHPFFEGID  345 (1317)
T ss_pred             HHHHHHhc-ChhhhcccccHHHHHhCccccCCC
Confidence            99999997 7889998   99999999998543


No 115
>PTZ00284 protein kinase; Provisional
Probab=100.00  E-value=6.1e-44  Score=382.01  Aligned_cols=250  Identities=23%  Similarity=0.401  Sum_probs=203.4

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCC------CCcceeeEEEEeC-C
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH------QHICKLFQVIETS-S   79 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~h------pnIv~l~~~~~~~-~   79 (568)
                      .++|++.+.||+|+||+||+|.+..+++.||||+++...  ........|+.+++.++|      ++++++++++... +
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~  205 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP--KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETG  205 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch--hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCc
Confidence            478999999999999999999999999999999996432  122345667777777654      4588899988754 5


Q ss_pred             EEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCceecCCCCCceEEcCCC---------------
Q psy6203          80 HIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH-LGYAHRDLKPENVLLDRNQ---------------  143 (568)
Q Consensus        80 ~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~---------------  143 (568)
                      ++|+|||++ |++|.+++.+.+.+++..++.++.||+.||.|||+ .|||||||||+|||++.++               
T Consensus       206 ~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~  284 (467)
T PTZ00284        206 HMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDP  284 (467)
T ss_pred             eEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCC
Confidence            789999998 88999999888899999999999999999999998 5999999999999998765               


Q ss_pred             -CeEEEeecCccCCCCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc
Q psy6203         144 -NLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN  222 (568)
Q Consensus       144 -~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~  222 (568)
                       .+||+|||.+.....    .....+||+.|+|||++.+.. ++.++|||||||++|||++|++||.+.+..+....+..
T Consensus       285 ~~vkl~DfG~~~~~~~----~~~~~~gt~~Y~APE~~~~~~-~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~  359 (467)
T PTZ00284        285 CRVRICDLGGCCDERH----SRTAIVSTRHYRSPEVVLGLG-WMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEK  359 (467)
T ss_pred             ceEEECCCCccccCcc----ccccccCCccccCcHHhhcCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence             499999998764322    234567999999999998876 58999999999999999999999987765443333221


Q ss_pred             C--CCC-------------------------C---------------CCCCChHHHHHHHHccccCcCCCCCHHHHhcCc
Q psy6203         223 G--KYT-------------------------E---------------PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHN  260 (568)
Q Consensus       223 ~--~~~-------------------------~---------------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp  260 (568)
                      .  .++                         .               ....++.+.+||.+||++||.+|||++|+|+||
T Consensus       360 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp  439 (467)
T PTZ00284        360 TLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHP  439 (467)
T ss_pred             HcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCc
Confidence            1  000                         0               001235678999999999999999999999999


Q ss_pred             cccc
Q psy6203         261 WVKM  264 (568)
Q Consensus       261 ~~~~  264 (568)
                      ||..
T Consensus       440 ~~~~  443 (467)
T PTZ00284        440 YVLK  443 (467)
T ss_pred             cccc
Confidence            9984


No 116
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as 
Probab=100.00  E-value=2.1e-43  Score=353.63  Aligned_cols=253  Identities=25%  Similarity=0.439  Sum_probs=213.4

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      .|++.+.||+|+||.||+|.+..+++.||+|.+.......  ....+..|+.++++++|+||+.+++.+.+.+..|+|||
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence            4788999999999999999999999999999987654322  23456779999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          87 YCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        87 ~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |++|++|.+++...  ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++.......  ..
T Consensus        81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--~~  158 (285)
T cd05630          81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--TI  158 (285)
T ss_pred             ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc--cc
Confidence            99999999988653  358999999999999999999999999999999999999999999999999987544321  22


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHH---HHHHHH-HcCCCCCCCCCChHHHHHHH
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID---QLYDKI-LNGKYTEPPWMSPNSRQIVR  240 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~---~~~~~i-~~~~~~~~~~~~~~~~~li~  240 (568)
                      ....|++.|+|||++.+.. ++.++||||+||++|+|++|..||......   .....+ .......+..+++++.+|+.
T Consensus       159 ~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  237 (285)
T cd05630         159 KGRVGTVGYMAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCK  237 (285)
T ss_pred             cCCCCCccccChHHHcCCC-CCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHH
Confidence            3447899999999998766 589999999999999999999999764321   111222 11222345568899999999


Q ss_pred             HccccCcCCCCC-----HHHHhcCccccc
Q psy6203         241 SMLQVEPGKRIK-----IQDLLGHNWVKM  264 (568)
Q Consensus       241 ~~L~~dP~~Rps-----~~ell~hp~~~~  264 (568)
                      +||+.||++|||     ++|+++||||+.
T Consensus       238 ~~l~~~p~~R~s~~~~~~~~~~~h~~~~~  266 (285)
T cd05630         238 MLLCKDPKERLGCQGGGAREVKEHPLFKQ  266 (285)
T ss_pred             HHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence            999999999999     999999999973


No 117
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00  E-value=1.4e-43  Score=366.31  Aligned_cols=254  Identities=25%  Similarity=0.451  Sum_probs=208.3

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeC-----
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETS-----   78 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~-----   78 (568)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|.+...... .....+.+|+.+++.++||||+++++++...     
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~   93 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE   93 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence            4568999999999999999999999999999999998764332 2345677899999999999999999998643     


Q ss_pred             -CEEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCC
Q psy6203          79 -SHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPE  157 (568)
Q Consensus        79 -~~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  157 (568)
                       ...|+||||+++ +|.+.+.  ..+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        94 ~~~~~lv~e~~~~-~l~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~  170 (355)
T cd07874          94 FQDVYLVMELMDA-NLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAG  170 (355)
T ss_pred             cceeEEEhhhhcc-cHHHHHh--hcCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCC
Confidence             357999999965 6766664  358899999999999999999999999999999999999999999999999987654


Q ss_pred             CCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC--------------
Q psy6203         158 GGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--------------  223 (568)
Q Consensus       158 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~--------------  223 (568)
                      ..  .......||+.|+|||++.+.. ++.++|||||||++|+|++|+.||.+.+.......+...              
T Consensus       171 ~~--~~~~~~~~t~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (355)
T cd07874         171 TS--FMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQP  247 (355)
T ss_pred             Cc--cccCCccccCCccCHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcH
Confidence            32  2234457899999999998766 588999999999999999999999876644332221110              


Q ss_pred             --------CC--------------------CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         224 --------KY--------------------TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       224 --------~~--------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                              ..                    ......+.++++||.+||+.||++|||+.|+|+||||..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~  316 (355)
T cd07874         248 TVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYINV  316 (355)
T ss_pred             HHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhc
Confidence                    00                    001123567899999999999999999999999999973


No 118
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00  E-value=3e-43  Score=356.56  Aligned_cols=253  Identities=22%  Similarity=0.356  Sum_probs=214.4

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+...........+.+|++++++++||||+++++++.+++.+|+||||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey   80 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH   80 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence            57999999999999999999999999999999987543222345678899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          88 CPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH-LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        88 ~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      +++++|.+++...+.+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++......   ....
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---~~~~  157 (308)
T cd06615          81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---MANS  157 (308)
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc---cccc
Confidence            9999999999888889999999999999999999998 59999999999999999999999999998654322   2234


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC-----------------------
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG-----------------------  223 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~-----------------------  223 (568)
                      .+|++.|+|||++.+.. ++.++|+|||||++|+|++|..||...+.......+...                       
T Consensus       158 ~~~~~~~~aPE~~~~~~-~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (308)
T cd06615         158 FVGTRSYMSPERLQGTH-YTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRP  236 (308)
T ss_pred             CCCCcCccChhHhcCCC-CCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccch
Confidence            57899999999987765 588999999999999999999999765543332222110                       


Q ss_pred             -------------CCC-CC-CCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         224 -------------KYT-EP-PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       224 -------------~~~-~~-~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                                   ..+ .+ ..+++++.+|+.+||..||++|||+.|++.||||..
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~  292 (308)
T cd06615         237 MAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKR  292 (308)
T ss_pred             hhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhh
Confidence                         000 01 125778999999999999999999999999999974


No 119
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00  E-value=2e-43  Score=352.25  Aligned_cols=246  Identities=28%  Similarity=0.458  Sum_probs=207.3

Q ss_pred             ecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCCCh
Q psy6203          16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGEL   93 (568)
Q Consensus        16 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g~L   93 (568)
                      ||+|+||.||+++++.+|+.||+|.+.......  .......|++++++++||||+++++++++....|+||||++|++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L   80 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL   80 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence            799999999999999999999999987543322  233456699999999999999999999999999999999999999


Q ss_pred             HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCCc
Q psy6203          94 LDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP  171 (568)
Q Consensus        94 ~~~i~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~  171 (568)
                      .+++....  .+++..+..++.||+.||+|||+.||+||||||+||+++.++.++|+|||++.......  ......|++
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--~~~~~~~~~  158 (277)
T cd05607          81 KYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--TITQRAGTN  158 (277)
T ss_pred             HHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--eeeccCCCC
Confidence            98886543  58899999999999999999999999999999999999999999999999987654321  223456899


Q ss_pred             cccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCC----HHHHHHHHHcCCCCCC-CCCChHHHHHHHHccccC
Q psy6203         172 NYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYTEP-PWMSPNSRQIVRSMLQVE  246 (568)
Q Consensus       172 ~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~----~~~~~~~i~~~~~~~~-~~~~~~~~~li~~~L~~d  246 (568)
                      .|+|||++.+.. ++.++||||+||++|+|++|..||....    ..++...........+ ..+++++.+||.+||+.|
T Consensus       159 ~y~aPE~~~~~~-~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~  237 (277)
T cd05607         159 GYMAPEILKEEP-YSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKK  237 (277)
T ss_pred             CccCHHHHccCC-CCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccC
Confidence            999999998776 6899999999999999999999997543    2334444444433322 357899999999999999


Q ss_pred             cCCCCCH----HHHhcCccccc
Q psy6203         247 PGKRIKI----QDLLGHNWVKM  264 (568)
Q Consensus       247 P~~Rps~----~ell~hp~~~~  264 (568)
                      |++||++    ++++.||||+.
T Consensus       238 P~~R~~~~~~~~~~~~h~~f~~  259 (277)
T cd05607         238 PEDRLGSREKNDDPRKHEFFKT  259 (277)
T ss_pred             HhhCCCCccchhhhhcChhhcC
Confidence            9999999    77889999974


No 120
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00  E-value=1.3e-43  Score=364.04  Aligned_cols=251  Identities=25%  Similarity=0.457  Sum_probs=205.6

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEc-----CCCcEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEeC-C
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHV-----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIETS-S   79 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~-~   79 (568)
                      .++|++.++||+|+||.||+|.+.     .++..||+|++...........+.+|+.+++.+ +||||+++++++... +
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~   85 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG   85 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC
Confidence            578999999999999999999752     345789999987544333456788899999999 899999999988654 4


Q ss_pred             EEEEEEeccCCCChHHHHHhc-----------------------------------------------------------
Q psy6203          80 HIFMVIEYCPGGELLDHIVER-----------------------------------------------------------  100 (568)
Q Consensus        80 ~~~lV~E~~~~g~L~~~i~~~-----------------------------------------------------------  100 (568)
                      .+++||||+++|+|.+++...                                                           
T Consensus        86 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (338)
T cd05102          86 PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDD  165 (338)
T ss_pred             ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccc
Confidence            689999999999999998752                                                           


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc-ccccccCCcccccc
Q psy6203         101 ---QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES-QLQTSCGSPNYAAP  176 (568)
Q Consensus       101 ---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aP  176 (568)
                         ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........ ......+++.|+||
T Consensus       166 ~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  245 (338)
T cd05102         166 LWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAP  245 (338)
T ss_pred             cccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCc
Confidence               23778888999999999999999999999999999999999999999999998754322111 11233456789999


Q ss_pred             ccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHH-HHHHHHHcCC-CCCCCCCChHHHHHHHHccccCcCCCCCH
Q psy6203         177 EVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSID-QLYDKILNGK-YTEPPWMSPNSRQIVRSMLQVEPGKRIKI  253 (568)
Q Consensus       177 E~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~-~~~~~i~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rps~  253 (568)
                      |++.+.. ++.++|||||||++|+|++ |..||.+.... .....+..+. ...+...++.+.+++.+||+.||.+|||+
T Consensus       246 E~~~~~~-~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~  324 (338)
T cd05102         246 ESIFDKV-YTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTF  324 (338)
T ss_pred             HHhhcCC-CCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCH
Confidence            9998766 5899999999999999997 99999875533 3444444443 33455678999999999999999999999


Q ss_pred             HHHhc
Q psy6203         254 QDLLG  258 (568)
Q Consensus       254 ~ell~  258 (568)
                      .|+++
T Consensus       325 ~el~~  329 (338)
T cd05102         325 SALVE  329 (338)
T ss_pred             HHHHH
Confidence            99975


No 121
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00  E-value=8.2e-43  Score=343.49  Aligned_cols=252  Identities=28%  Similarity=0.525  Sum_probs=218.5

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEe-CCEEEEEEe
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIET-SSHIFMVIE   86 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~-~~~~~lV~E   86 (568)
                      .|++.+.||+|++|.||++.+..+++.||+|.+...... ...+.+.+|+.++++++|||++++++.+.. ...+|+|||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG   80 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence            589999999999999999999999999999998754432 234567889999999999999999998864 446899999


Q ss_pred             ccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          87 YCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        87 ~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |+++++|.+++...  ..+++.++..++.|++.||.+||++||+||||||+||+++.++.++|+|||++...... ....
T Consensus        81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~-~~~~  159 (257)
T cd08223          81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ-CDMA  159 (257)
T ss_pred             ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEeccc-CCcc
Confidence            99999999999763  45899999999999999999999999999999999999999999999999998755332 1223


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-CCCCCCChHHHHHHHHcc
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY-TEPPWMSPNSRQIVRSML  243 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~L  243 (568)
                      ....+++.|+|||++.+.. ++.++|||||||++|+|++|..||...+.......+..+.. ..+...++.+.+++.+||
T Consensus       160 ~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  238 (257)
T cd08223         160 STLIGTPYYMSPELFSNKP-YNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELGELIATML  238 (257)
T ss_pred             ccccCCcCccChhHhcCCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCccccCHHHHHHHHHHh
Confidence            4456899999999998766 58899999999999999999999998887777666666655 345568899999999999


Q ss_pred             ccCcCCCCCHHHHhcCccc
Q psy6203         244 QVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       244 ~~dP~~Rps~~ell~hp~~  262 (568)
                      +.||++|||+.+++.||||
T Consensus       239 ~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         239 SKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             ccCcccCCCHHHHhcCCCC
Confidence            9999999999999999997


No 122
>KOG0579|consensus
Probab=100.00  E-value=3.1e-45  Score=370.03  Aligned_cols=262  Identities=27%  Similarity=0.448  Sum_probs=228.2

Q ss_pred             cccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEE
Q psy6203           4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFM   83 (568)
Q Consensus         4 ~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l   83 (568)
                      .+.++.+.|+..||.|+||+||+|..+.++-..|.|++.... .+..+.+.-||.||..++||+||++++.|...+.++|
T Consensus        28 lnP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetks-eEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwi  106 (1187)
T KOG0579|consen   28 LNPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKS-EEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWI  106 (1187)
T ss_pred             CCHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccc-hhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEE
Confidence            345667889999999999999999999998888999887543 3456678889999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc
Q psy6203          84 VIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES  162 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  162 (568)
                      +.|||.||-....+.+ ...+++.++..+++|++.||.|||+++|||||||..|||++-+|.++|+|||++...... ..
T Consensus       107 liEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t-~q  185 (1187)
T KOG0579|consen  107 LIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKST-RQ  185 (1187)
T ss_pred             EEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhH-Hh
Confidence            9999999998888776 457999999999999999999999999999999999999999999999999998765432 22


Q ss_pred             ccccccCCccccccccccC----cccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC---CCCCCChHH
Q psy6203         163 QLQTSCGSPNYAAPEVIKG----KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT---EPPWMSPNS  235 (568)
Q Consensus       163 ~~~~~~gt~~y~aPE~l~~----~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~---~~~~~~~~~  235 (568)
                      ...++.|||+|||||+...    ...|+.++||||||++|.+|..+.+|...-++..++-+|....++   .|...+..+
T Consensus       186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F  265 (1187)
T KOG0579|consen  186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSF  265 (1187)
T ss_pred             hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHH
Confidence            3456789999999999753    234789999999999999999999999888888887777776554   355678899


Q ss_pred             HHHHHHccccCcCCCCCHHHHhcCcccccCCC
Q psy6203         236 RQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPE  267 (568)
Q Consensus       236 ~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~  267 (568)
                      .||+++||.+||..||++.++|.||||...+.
T Consensus       266 ~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~S  297 (1187)
T KOG0579|consen  266 SDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPS  297 (1187)
T ss_pred             HHHHHHHHhcCCccCCCHHHHhhCcccccCCc
Confidence            99999999999999999999999999985443


No 123
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00  E-value=9.7e-43  Score=342.63  Aligned_cols=252  Identities=25%  Similarity=0.411  Sum_probs=222.0

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      +|.+.+.||+|++|.||+|.+..+++.||+|.+...... .....+..|+.++++++||||+++++++...+..|+||||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY   80 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence            588999999999999999999999999999998754332 3456788899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          88 CPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        88 ~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      +++++|.+++...  ..+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++....... ....
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~-~~~~  159 (256)
T cd08529          81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT-NFAN  159 (256)
T ss_pred             CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc-chhh
Confidence            9999999999764  578999999999999999999999999999999999999999999999999987654321 2223


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC-CCCCChHHHHHHHHccc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE-PPWMSPNSRQIVRSMLQ  244 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~li~~~L~  244 (568)
                      ...|++.|+|||++.+.. ++.++|+|||||++|+|++|..||...+.......+..+..+. +..++..+.+++.+||+
T Consensus       160 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  238 (256)
T cd08529         160 TIVGTPYYLSPELCEDKP-YNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPPVSQMYSQQLAQLIDQCLT  238 (256)
T ss_pred             ccccCccccCHHHhcCCC-CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHcc
Confidence            456889999999998766 5889999999999999999999999888777777777765543 33678999999999999


Q ss_pred             cCcCCCCCHHHHhcCccc
Q psy6203         245 VEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       245 ~dP~~Rps~~ell~hp~~  262 (568)
                      .+|++||++.+++.|||+
T Consensus       239 ~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         239 KDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             CCcccCcCHHHHhhCCCC
Confidence            999999999999999996


No 124
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00  E-value=7.3e-43  Score=349.47  Aligned_cols=254  Identities=27%  Similarity=0.421  Sum_probs=213.7

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      ++|++.+.||+|++|.||+|.+..+|+.||+|++...... ...+.+.+|+.++++++||||+++++++...+..++|||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e   80 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE   80 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence            5799999999999999999999999999999998754322 223457789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          87 YCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        87 ~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      |+++++|..++.....+++..+..++.||+.||.|||+.|++||||||+||+++.++.++|+|||++........ ....
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~-~~~~  159 (286)
T cd07847          81 YCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD-DYTD  159 (286)
T ss_pred             ccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc-cccC
Confidence            999988888777667899999999999999999999999999999999999999999999999999876544321 2233


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC---------------C------C
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG---------------K------Y  225 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~---------------~------~  225 (568)
                      ..++..|+|||.+.+...++.++||||||+++|+|++|.+||.+.+..+....+...               .      .
T Consensus       160 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T cd07847         160 YVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSI  239 (286)
T ss_pred             cccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccC
Confidence            457889999999877555688999999999999999999999876654333222110               0      0


Q ss_pred             CC----------CCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         226 TE----------PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       226 ~~----------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                      +.          .+.++..+.+||.+||+.||++|||+.|++.||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         240 PEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             CCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence            00          12357889999999999999999999999999998


No 125
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00  E-value=5.4e-43  Score=350.36  Aligned_cols=252  Identities=25%  Similarity=0.399  Sum_probs=209.4

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC-chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      +|++.+.||+|++|.||+|.+..++..||+|.+......+ ....+.+|+.++++++||||+++++++.+++..|+||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF   80 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence            5899999999999999999999999999999987543322 245678899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          88 CPGGELLDHIVER---QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        88 ~~~g~L~~~i~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      ++ ++|.+++...   ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....... ...
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-~~~  158 (285)
T cd07861          81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV-RVY  158 (285)
T ss_pred             CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc-ccc
Confidence            96 6888887542   568999999999999999999999999999999999999999999999999987543221 122


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC--C------------------
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--K------------------  224 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~--~------------------  224 (568)
                      ....+++.|+|||++.+...++.++|||||||++|+|++|++||.+.+.......+...  .                  
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (285)
T cd07861         159 THEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNT  238 (285)
T ss_pred             cCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhh
Confidence            33457889999999877665688999999999999999999999876543322211100  0                  


Q ss_pred             ---C------CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         225 ---Y------TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       225 ---~------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                         .      .....+++++.++|.+||+.||.+|||+.++++||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         239 FPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             ccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence               0      0122368899999999999999999999999999997


No 126
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00  E-value=6.3e-43  Score=349.94  Aligned_cols=254  Identities=28%  Similarity=0.447  Sum_probs=215.8

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      +|++.+.||+|++|.||+|.+..+|+.||+|++...... .....+.+|+.++++++||||+++++++...+..|+||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~   80 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY   80 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence            589999999999999999999999999999999865432 2345788899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          88 CPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        88 ~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      + +++|.+++.. ...+++..++.++.||+.||.|||+.|++|+||||+||+++.++.++|+|||++.............
T Consensus        81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~  159 (286)
T cd07832          81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSH  159 (286)
T ss_pred             c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCcccc
Confidence            9 9999999865 4568999999999999999999999999999999999999999999999999987654432222344


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC---------------------C
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK---------------------Y  225 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~---------------------~  225 (568)
                      ..|+..|+|||.+.+...++.++||||+||++|+|++|.+||.+.+.......+....                     +
T Consensus       160 ~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T cd07832         160 QVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITF  239 (286)
T ss_pred             ccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccC
Confidence            5789999999998776656889999999999999999999998776554443332210                     0


Q ss_pred             C---------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q psy6203         226 T---------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       226 ~---------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                      .         ..+..+..+.++|.+||+.||++|||+++++.||||.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         240 PESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             CCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence            0         0123568899999999999999999999999999984


No 127
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00  E-value=7.9e-43  Score=349.51  Aligned_cols=254  Identities=25%  Similarity=0.434  Sum_probs=217.4

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      .|+..+.||+|+||+||+|.+..+++.||+|.+.......  ....+.+|+.+++.++|+||+.+++.+..++..++|||
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e   80 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT   80 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence            4788999999999999999999999999999987654322  23456789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          87 YCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        87 ~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |+++++|.+++...  ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++......  ...
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~--~~~  158 (285)
T cd05632          81 IMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEG--ESI  158 (285)
T ss_pred             eccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCC--Ccc
Confidence            99999999888653  36999999999999999999999999999999999999999999999999998654322  122


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHH----HHHHHHcCCCCCCCCCChHHHHHHH
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQ----LYDKILNGKYTEPPWMSPNSRQIVR  240 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~----~~~~i~~~~~~~~~~~~~~~~~li~  240 (568)
                      ....|++.|+|||++.+.. ++.++|+||+||++|+|++|..||.......    +...+.......+..+++++.+|+.
T Consensus       159 ~~~~g~~~~~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  237 (285)
T cd05632         159 RGRVGTVGYMAPEVLNNQR-YTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICK  237 (285)
T ss_pred             cCCCCCcCccChHHhcCCC-CCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHH
Confidence            3457899999999998765 5889999999999999999999998765543    2333344444556668899999999


Q ss_pred             HccccCcCCCCC-----HHHHhcCcccccC
Q psy6203         241 SMLQVEPGKRIK-----IQDLLGHNWVKMG  265 (568)
Q Consensus       241 ~~L~~dP~~Rps-----~~ell~hp~~~~~  265 (568)
                      +||+.||.+|||     +.+++.|+||+..
T Consensus       238 ~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05632         238 MLLTKDPKQRLGCQEEGAGEVKRHPFFRNM  267 (285)
T ss_pred             HHccCCHhHcCCCcccChHHHHcChhhhcC
Confidence            999999999999     8899999999853


No 128
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00  E-value=3.4e-43  Score=357.63  Aligned_cols=246  Identities=24%  Similarity=0.399  Sum_probs=194.7

Q ss_pred             EeeecccCCeEEEEEEEc--CCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEe--CCEEEEEEecc
Q psy6203          13 ERTVGSGGFAKVKLATHV--LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIET--SSHIFMVIEYC   88 (568)
Q Consensus        13 ~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~--~~~~~lV~E~~   88 (568)
                      +++||+|+||+||+|+++  .+++.||+|.+.....   ...+.+|+.++++++||||+++++++..  ...+|+||||+
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~   82 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI---SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA   82 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC---cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc
Confidence            578999999999999975  4678999999865432   2356789999999999999999999854  45789999999


Q ss_pred             CCCChHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEE----cCCCCeEEEeecCccC
Q psy6203          89 PGGELLDHIVER---------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLL----DRNQNLKLIDFGLCAK  155 (568)
Q Consensus        89 ~~g~L~~~i~~~---------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~~~~kl~DFG~a~~  155 (568)
                      . ++|.+++...         ..+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||++..
T Consensus        83 ~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~  161 (317)
T cd07868          83 E-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  161 (317)
T ss_pred             C-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceec
Confidence            4 5888887532         258999999999999999999999999999999999999    4567899999999876


Q ss_pred             CCCCCc--cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCH---------HHHHHHHHc--
Q psy6203         156 PEGGLE--SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSI---------DQLYDKILN--  222 (568)
Q Consensus       156 ~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~---------~~~~~~i~~--  222 (568)
                      ......  .......||+.|+|||++.+...++.++||||+||++|+|++|.+||.....         ......+..  
T Consensus       162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  241 (317)
T cd07868         162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVM  241 (317)
T ss_pred             cCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhc
Confidence            543211  1234557899999999998766678999999999999999999999964321         011111110  


Q ss_pred             --------------------------CCCCC----------CCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         223 --------------------------GKYTE----------PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       223 --------------------------~~~~~----------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                                                .....          ....+..+.+||.+||+.||.+|||++|+|+||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         242 GFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             CCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                                      00000          01134578899999999999999999999999998


No 129
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00  E-value=1.7e-43  Score=353.95  Aligned_cols=252  Identities=27%  Similarity=0.462  Sum_probs=209.6

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC-chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      +|++.+.||+|+||.||+|.+..+|+.||+|.+....... ....+.+|+.++++++||||+++++++.+.+..|+|+||
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY   80 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence            5899999999999999999999999999999987543322 234567899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          88 CPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        88 ~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      ++ ++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....... .....
T Consensus        81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-~~~~~  158 (284)
T cd07839          81 CD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPV-RCYSA  158 (284)
T ss_pred             CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCC-CCcCC
Confidence            96 578887765 5679999999999999999999999999999999999999999999999999987544321 12234


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCC-CCCCHHHHHHHHHcC----------------C---C-
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF-DSDSIDQLYDKILNG----------------K---Y-  225 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf-~~~~~~~~~~~i~~~----------------~---~-  225 (568)
                      ..+++.|+|||++.+...++.++|||||||++|+|++|..|| .+.+..+..+.+...                .   + 
T Consensus       159 ~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07839         159 EVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYP  238 (284)
T ss_pred             CccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccC
Confidence            467899999999887666788999999999999999998875 555544443333210                0   0 


Q ss_pred             ---------CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         226 ---------TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       226 ---------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                               ...+.+++++.++|.+||+.||.+|||+++++.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         239 MYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             CCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence                     0112467899999999999999999999999999997


No 130
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 
Probab=100.00  E-value=8.5e-43  Score=345.14  Aligned_cols=255  Identities=27%  Similarity=0.466  Sum_probs=220.2

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      ++|++.+.||.|+||+||+|.+..++..+|+|++...........+.+|+.+++.++|+||+++++.+...+..++|||+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~   80 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY   80 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence            57999999999999999999998899999999997655444567789999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc--
Q psy6203          88 CPGGELLDHIVER---QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES--  162 (568)
Q Consensus        88 ~~~g~L~~~i~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~--  162 (568)
                      +++++|.+++...   ..+++..+..++.|++.||.|||+.||+||||+|+||++++++.++|+|||++.........  
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~  160 (267)
T cd06610          81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTR  160 (267)
T ss_pred             cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccc
Confidence            9999999999764   45899999999999999999999999999999999999999999999999998755432211  


Q ss_pred             -ccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC-C-----CCCChHH
Q psy6203         163 -QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE-P-----PWMSPNS  235 (568)
Q Consensus       163 -~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~-~-----~~~~~~~  235 (568)
                       ......|+..|+|||++.....++.++|+|||||++|+|++|..||...+.......+....... +     ..+++.+
T Consensus       161 ~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (267)
T cd06610         161 KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSF  240 (267)
T ss_pred             cccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHH
Confidence             12334689999999998776456899999999999999999999998777665555554443221 1     2467889


Q ss_pred             HHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         236 RQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       236 ~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                      .+++.+||..||++|||+.+++.||||
T Consensus       241 ~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         241 RKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             HHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            999999999999999999999999997


No 131
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=100.00  E-value=3.5e-43  Score=348.38  Aligned_cols=253  Identities=29%  Similarity=0.428  Sum_probs=213.5

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      .++|++.+.||+|+||.||+|.+..+++.||+|+++.... .....+.+|+.+++.++||||+++++.+...+..|+|||
T Consensus         8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e   86 (267)
T cd06645           8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG-EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICME   86 (267)
T ss_pred             HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEe
Confidence            4689999999999999999999999999999999875432 234567789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          87 YCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        87 ~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      |+++++|.+++...+.+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++...... ......
T Consensus        87 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~-~~~~~~  165 (267)
T cd06645          87 FCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITAT-IAKRKS  165 (267)
T ss_pred             ccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCc-cccccc
Confidence            9999999999988889999999999999999999999999999999999999999999999999998654322 122234


Q ss_pred             ccCCcccccccccc--CcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC-----CCCChHHHHHH
Q psy6203         167 SCGSPNYAAPEVIK--GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEP-----PWMSPNSRQIV  239 (568)
Q Consensus       167 ~~gt~~y~aPE~l~--~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~li  239 (568)
                      ..|++.|+|||++.  ....++.++|+|||||++|+|++|..||...................+     ..++..+.++|
T Consensus       166 ~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  245 (267)
T cd06645         166 FIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFV  245 (267)
T ss_pred             ccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHH
Confidence            56899999999974  223357899999999999999999999865543333223322322221     23678899999


Q ss_pred             HHccccCcCCCCCHHHHhcCcc
Q psy6203         240 RSMLQVEPGKRIKIQDLLGHNW  261 (568)
Q Consensus       240 ~~~L~~dP~~Rps~~ell~hp~  261 (568)
                      .+||+.||++|||++++++|||
T Consensus       246 ~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         246 KMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             HHHccCCchhCcCHHHHhcCCC
Confidence            9999999999999999999998


No 132
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00  E-value=1.3e-42  Score=344.08  Aligned_cols=253  Identities=29%  Similarity=0.487  Sum_probs=217.2

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--------chHHHHHHHHHHHhCCCCCcceeeEEEEeCCE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--------DLPRVKLEINALKHISHQHICKLFQVIETSSH   80 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~   80 (568)
                      +|.+.+.||+|++|.||+|.+..+++.||+|.+.......        ..+.+.+|+.++++++||||+++++++...+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            5889999999999999999999899999999887543321        12457789999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC
Q psy6203          81 IFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL  160 (568)
Q Consensus        81 ~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  160 (568)
                      .++||||+++++|.+++...+.+++..+..++.|++.||+|||++|++||||+|+||+++.++.++|+|||++.......
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANS  160 (267)
T ss_pred             cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence            99999999999999999888889999999999999999999999999999999999999999999999999987654211


Q ss_pred             c-----cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC-CCCCCCCCChH
Q psy6203         161 E-----SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG-KYTEPPWMSPN  234 (568)
Q Consensus       161 ~-----~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~  234 (568)
                      .     .......|+..|+|||.+.+.. ++.++|+|||||++|+|++|..||...+.......+... ....+...+..
T Consensus       161 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd06628         161 LSTKTNGARPSLQGSVFWMAPEVVKQTS-YTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNISSE  239 (267)
T ss_pred             ccCCccccccccCCCcCccChhHhccCC-CCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCCCcCCcccCHH
Confidence            1     1112345889999999998765 588999999999999999999999876655544444443 23445568899


Q ss_pred             HHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         235 SRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       235 ~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                      +.++|.+||+.||.+||++.|+++||||
T Consensus       240 ~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         240 AIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             HHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            9999999999999999999999999997


No 133
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=5.5e-43  Score=366.31  Aligned_cols=253  Identities=27%  Similarity=0.382  Sum_probs=207.2

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEc--CCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHV--LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFM   83 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l   83 (568)
                      +..+|.+++.||+|+||.||+|...  .++..||+|.+....      ...+|+.+|++++||||+++++++...+..|+
T Consensus        90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~------~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l  163 (392)
T PHA03207         90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGK------TPGREIDILKTISHRAIINLIHAYRWKSTVCM  163 (392)
T ss_pred             ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccc------cHHHHHHHHHhcCCCCccceeeeEeeCCEEEE
Confidence            4567999999999999999999754  356789999876432      35679999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc-c
Q psy6203          84 VIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE-S  162 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~  162 (568)
                      |||++ +++|.+++.....+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++........ .
T Consensus       164 v~e~~-~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~  242 (392)
T PHA03207        164 VMPKY-KCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTP  242 (392)
T ss_pred             Eehhc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccc
Confidence            99999 468999997778899999999999999999999999999999999999999999999999999876543221 1


Q ss_pred             ccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCH---HHHHHHHHc----C------------
Q psy6203         163 QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSI---DQLYDKILN----G------------  223 (568)
Q Consensus       163 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~---~~~~~~i~~----~------------  223 (568)
                      ......||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+...   ...+..+..    .            
T Consensus       243 ~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~  321 (392)
T PHA03207        243 QCYGWSGTLETNSPELLALDP-YCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNL  321 (392)
T ss_pred             cccccccccCccCHhHhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhH
Confidence            223457999999999998766 58899999999999999999999965431   111111110    0            


Q ss_pred             -------------CCCCC-----CCCChHHHHHHHHccccCcCCCCCHHHHhcCcccccCC
Q psy6203         224 -------------KYTEP-----PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGP  266 (568)
Q Consensus       224 -------------~~~~~-----~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  266 (568)
                                   .+..+     ...+.++.++|.+||..||++|||+.|+|.||||...+
T Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~  382 (392)
T PHA03207        322 CKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEP  382 (392)
T ss_pred             HHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccc
Confidence                         00111     12466789999999999999999999999999998544


No 134
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00  E-value=6.1e-43  Score=348.06  Aligned_cols=254  Identities=28%  Similarity=0.470  Sum_probs=222.0

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      ++|++.+.||.|++|.||+|.+..+++.||+|++...........+.+|+.+++.++||||+++++++.+....|+|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY   80 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence            57999999999999999999999999999999997654444556788999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccc
Q psy6203          88 CPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS  167 (568)
Q Consensus        88 ~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~  167 (568)
                      +++++|.+++... ++++..+..++.|++.||.|||+++++||||+|+||+++.++.++|+|||++....... ......
T Consensus        81 ~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~~~~  158 (274)
T cd06609          81 CGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-SKRNTF  158 (274)
T ss_pred             eCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccc-cccccc
Confidence            9999999998765 89999999999999999999999999999999999999999999999999987654321 223345


Q ss_pred             cCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-CCCC-CChHHHHHHHHcccc
Q psy6203         168 CGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPW-MSPNSRQIVRSMLQV  245 (568)
Q Consensus       168 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~-~~~~-~~~~~~~li~~~L~~  245 (568)
                      .+++.|+|||.+.+.. ++.++|||||||++|+|++|..||...+.......+..+..+ .+.. +++++.+++.+||..
T Consensus       159 ~~~~~y~~PE~~~~~~-~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~  237 (274)
T cd06609         159 VGTPFWMAPEVIKQSG-YDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLEGNKFSKPFKDFVSLCLNK  237 (274)
T ss_pred             cCCccccChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCcccccCHHHHHHHHHHhhC
Confidence            6888999999998776 689999999999999999999999877666555555554332 2333 788999999999999


Q ss_pred             CcCCCCCHHHHhcCccccc
Q psy6203         246 EPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       246 dP~~Rps~~ell~hp~~~~  264 (568)
                      ||++|||+++++.||||..
T Consensus       238 ~p~~Rpt~~~il~~~~~~~  256 (274)
T cd06609         238 DPKERPSAKELLKHKFIKK  256 (274)
T ss_pred             ChhhCcCHHHHhhChhhcC
Confidence            9999999999999999983


No 135
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00  E-value=1.5e-42  Score=352.80  Aligned_cols=257  Identities=31%  Similarity=0.563  Sum_probs=222.8

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++.+.||+|++|.||+|.+..+++.||+|.+.......  ....+..|+.+++.++||||+++++.+.+.+..|+||
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   80 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM   80 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence            47999999999999999999999999999999998765432  3456888999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc--
Q psy6203          86 EYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE--  161 (568)
Q Consensus        86 E~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~--  161 (568)
                      ||+.|++|.+++...  ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++.++|+|||++........  
T Consensus        81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~  160 (316)
T cd05574          81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPV  160 (316)
T ss_pred             EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccccc
Confidence            999999999998754  5689999999999999999999999999999999999999999999999998764322110  


Q ss_pred             --------------------------cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHH
Q psy6203         162 --------------------------SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQ  215 (568)
Q Consensus       162 --------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~  215 (568)
                                                .......||..|+|||++.+.. ++.++||||||+++|+|++|..||.+.+...
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~  239 (316)
T cd05574         161 SKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDG-HGSAVDWWTLGILLYEMLYGTTPFKGSNRDE  239 (316)
T ss_pred             ccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCC-CCchHHHHHHHHHHHHHhhCCCCCCCCchHH
Confidence                                      0112346788999999998766 5889999999999999999999999888777


Q ss_pred             HHHHHHcCCCCCCCC--CChHHHHHHHHccccCcCCCCC----HHHHhcCcccccC
Q psy6203         216 LYDKILNGKYTEPPW--MSPNSRQIVRSMLQVEPGKRIK----IQDLLGHNWVKMG  265 (568)
Q Consensus       216 ~~~~i~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rps----~~ell~hp~~~~~  265 (568)
                      .+..+.......+..  .++.+.++|.+||..||++|||    ++|++.||||+..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~  295 (316)
T cd05574         240 TFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGV  295 (316)
T ss_pred             HHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcC
Confidence            777776655544433  6899999999999999999999    9999999999854


No 136
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00  E-value=3.7e-43  Score=350.79  Aligned_cols=258  Identities=31%  Similarity=0.482  Sum_probs=221.8

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      +..++|++.+.||.|+||.||+|.+..++..+|+|++.... ......+..|+.++++++||||+++++++...+..|+|
T Consensus         2 ~~~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (280)
T cd06611           2 NPNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES-EEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL   80 (280)
T ss_pred             CchhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC-HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence            34678999999999999999999998899999999986442 22345678899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          85 IEYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      |||+++++|.+++... ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++....... ..
T Consensus        81 ~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~~  159 (280)
T cd06611          81 IEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL-QK  159 (280)
T ss_pred             eeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccc-cc
Confidence            9999999999998764 579999999999999999999999999999999999999999999999999876543221 12


Q ss_pred             cccccCCccccccccccC----cccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC---CCCCCCChHHH
Q psy6203         164 LQTSCGSPNYAAPEVIKG----KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY---TEPPWMSPNSR  236 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~----~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~  236 (568)
                      .....+++.|+|||++..    ...++.++|||||||++|+|++|..||...+.......+..+..   ..+..++.++.
T Consensus       160 ~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (280)
T cd06611         160 RDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFN  239 (280)
T ss_pred             cceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHH
Confidence            234468999999999852    22357789999999999999999999988877776667766543   23456789999


Q ss_pred             HHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         237 QIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       237 ~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      ++|.+||+.||.+|||+.++++||||..
T Consensus       240 ~li~~~l~~~p~~Rps~~~il~~~~~~~  267 (280)
T cd06611         240 DFLKSCLVKDPDDRPTAAELLKHPFVSD  267 (280)
T ss_pred             HHHHHHhccChhhCcCHHHHhcChhhcc
Confidence            9999999999999999999999999984


No 137
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=100.00  E-value=1.5e-42  Score=349.51  Aligned_cols=259  Identities=29%  Similarity=0.477  Sum_probs=220.7

Q ss_pred             CccccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEE
Q psy6203           2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHI   81 (568)
Q Consensus         2 ~~~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~   81 (568)
                      .+.+...+|++.+.||+|+||.||+|.+..++..||+|.+...... ....+.+|+.+++.++||||+++++.+......
T Consensus        14 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~   92 (296)
T cd06654          14 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-KKELIINEILVMRENKNPNIVNYLDSYLVGDEL   92 (296)
T ss_pred             ccCCcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc-hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEE
Confidence            3556778999999999999999999999999999999998765432 346788899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          82 FMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      |+||||+++++|.+++.+ ..+++.++..++.|++.||.|||+.||+||||||+||+++.++.+||+|||++....... 
T Consensus        93 ~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~-  170 (296)
T cd06654          93 WVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-  170 (296)
T ss_pred             EEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccc-
Confidence            999999999999998854 568999999999999999999999999999999999999999999999999987543321 


Q ss_pred             cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHH-cCCC--CCCCCCChHHHHH
Q psy6203         162 SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL-NGKY--TEPPWMSPNSRQI  238 (568)
Q Consensus       162 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~-~~~~--~~~~~~~~~~~~l  238 (568)
                      .......|++.|+|||.+.+.. ++.++|||||||++|+|++|..||...+.......+. .+..  ..+..+++.+.++
T Consensus       171 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  249 (296)
T cd06654         171 SKRSTMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDF  249 (296)
T ss_pred             cccCcccCCccccCHHHHcCCC-CCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHH
Confidence            1223446889999999988765 5889999999999999999999998776543332222 2221  2344578899999


Q ss_pred             HHHccccCcCCCCCHHHHhcCccccc
Q psy6203         239 VRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       239 i~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      |.+||..||++|||+.++++||||..
T Consensus       250 i~~~l~~~p~~Rpt~~eil~~~~~~~  275 (296)
T cd06654         250 LNRCLDMDVEKRGSAKELLQHQFLKI  275 (296)
T ss_pred             HHHHCcCCcccCcCHHHHhhChhhhc
Confidence            99999999999999999999999984


No 138
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00  E-value=1e-42  Score=347.54  Aligned_cols=249  Identities=24%  Similarity=0.382  Sum_probs=210.7

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++...........+.+|+.++++++||||+++++.+...+..++||||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   80 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF   80 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence            46899999999999999999999999999999987653333345688899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccc
Q psy6203          88 CPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS  167 (568)
Q Consensus        88 ~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~  167 (568)
                      +++++|..+    ..+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++......   .....
T Consensus        81 ~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~---~~~~~  153 (279)
T cd06619          81 MDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS---IAKTY  153 (279)
T ss_pred             CCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc---cccCC
Confidence            999988654    45789999999999999999999999999999999999999999999999998754332   22345


Q ss_pred             cCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCC-------HHHHHHHHHcCCCCC--CCCCChHHHHH
Q psy6203         168 CGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-------IDQLYDKILNGKYTE--PPWMSPNSRQI  238 (568)
Q Consensus       168 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~-------~~~~~~~i~~~~~~~--~~~~~~~~~~l  238 (568)
                      +|+..|+|||++.+.. ++.++|+|||||++|+|++|+.||....       .......+.......  ....++++.++
T Consensus       154 ~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  232 (279)
T cd06619         154 VGTNAYMAPERISGEQ-YGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHF  232 (279)
T ss_pred             CCChhhcCceeecCCC-CCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHH
Confidence            7899999999998766 5889999999999999999999996422       122233333222221  23478899999


Q ss_pred             HHHccccCcCCCCCHHHHhcCccccc
Q psy6203         239 VRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       239 i~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      +.+||+.||.+||+++|++.||||..
T Consensus       233 i~~~l~~~P~~Rp~~~eil~~~~~~~  258 (279)
T cd06619         233 ITQCMRKQPKERPAPENLMDHPFIVQ  258 (279)
T ss_pred             HHHHhhCChhhCCCHHHHhcCccccc
Confidence            99999999999999999999999984


No 139
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00  E-value=7.9e-43  Score=345.87  Aligned_cols=251  Identities=21%  Similarity=0.333  Sum_probs=212.9

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEc---CCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHV---LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFM   83 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l   83 (568)
                      .++|++.+.||+|+||.||+|.++   ..+..||+|.++..........+.+|+.++++++||||+++++++...+..++
T Consensus         4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l   83 (266)
T cd05064           4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI   83 (266)
T ss_pred             hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence            357999999999999999999865   34578999998765433334567889999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc
Q psy6203          84 VIEYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES  162 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  162 (568)
                      ||||+++|+|.+++... ..+++..+..++.||+.||+|||++|++||||||+||+++.++.++++|||.+.........
T Consensus        84 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~  163 (266)
T cd05064          84 VTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIY  163 (266)
T ss_pred             EEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccchh
Confidence            99999999999998764 57899999999999999999999999999999999999999999999999987654322111


Q ss_pred             ccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCChHHHHHHH
Q psy6203         163 QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-TEPPWMSPNSRQIVR  240 (568)
Q Consensus       163 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~  240 (568)
                      ......++..|+|||.+.+.. ++.++|||||||++|++++ |..||...+..+..+.+..+.. +.+...+..+.+++.
T Consensus       164 ~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  242 (266)
T cd05064         164 TTMSGKSPVLWAAPEAIQYHH-FSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPRNCPNLLHQLML  242 (266)
T ss_pred             cccCCCCceeecCHHHHhhCC-ccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
Confidence            112234567899999998766 5889999999999999775 9999998888888777776633 455667899999999


Q ss_pred             HccccCcCCCCCHHHHhc
Q psy6203         241 SMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       241 ~~L~~dP~~Rps~~ell~  258 (568)
                      +||+.+|.+|||+++|++
T Consensus       243 ~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         243 DCWQKERGERPRFSQIHS  260 (266)
T ss_pred             HHcCCCchhCCCHHHHHH
Confidence            999999999999999875


No 140
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00  E-value=1.9e-42  Score=350.81  Aligned_cols=262  Identities=27%  Similarity=0.420  Sum_probs=216.7

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCc-hHHHHHHHHHHHhCCCCCcceeeEEEEeC--CEE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLFQVIETS--SHI   81 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~--~~~   81 (568)
                      +..++|++.+.||+|+||.||+|.+..+|+.||+|++........ .....+|+.++++++|+||+++++++...  +..
T Consensus         4 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (309)
T cd07845           4 RSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSI   83 (309)
T ss_pred             ccccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeE
Confidence            345789999999999999999999999999999999875443222 23456799999999999999999998755  568


Q ss_pred             EEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC
Q psy6203          82 FMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL  160 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  160 (568)
                      ++||||+. ++|.+++.. ...+++..+..++.||+.||.|||+.|++||||||+||+++.++.+||+|||++.......
T Consensus        84 ~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~  162 (309)
T cd07845          84 FLVMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA  162 (309)
T ss_pred             EEEEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc
Confidence            99999996 578888765 4678999999999999999999999999999999999999999999999999987654321


Q ss_pred             ccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC-----------------
Q psy6203         161 ESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG-----------------  223 (568)
Q Consensus       161 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~-----------------  223 (568)
                       .......+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.+..+....+...                 
T Consensus       163 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (309)
T cd07845         163 -KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPL  241 (309)
T ss_pred             -CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccc
Confidence             12223346788999999877655789999999999999999999999888776665554431                 


Q ss_pred             --CCCCC-----------CCCChHHHHHHHHccccCcCCCCCHHHHhcCcccccCCCC
Q psy6203         224 --KYTEP-----------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPED  268 (568)
Q Consensus       224 --~~~~~-----------~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~~  268 (568)
                        .+..+           ...++.+.++|.+||+.||++|||++|++.||||+..+..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~~~  299 (309)
T cd07845         242 VGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKPLP  299 (309)
T ss_pred             cccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCCCC
Confidence              01000           1257889999999999999999999999999999865544


No 141
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=100.00  E-value=7.7e-43  Score=345.90  Aligned_cols=255  Identities=29%  Similarity=0.439  Sum_probs=214.1

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      ...++|++.+.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.++++++||||+++++++...+..++|
T Consensus         6 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv   84 (267)
T cd06646           6 NPQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP-GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC   84 (267)
T ss_pred             CchhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc-cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence            44578999999999999999999999999999999987543 23345678899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          85 IEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |||+++++|.+++..++.+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++....... ...
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-~~~  163 (267)
T cd06646          85 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI-AKR  163 (267)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccc-ccc
Confidence            9999999999999888889999999999999999999999999999999999999999999999999987653221 122


Q ss_pred             ccccCCccccccccccC--cccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC-----CCCCChHHHH
Q psy6203         165 QTSCGSPNYAAPEVIKG--KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE-----PPWMSPNSRQ  237 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~  237 (568)
                      ....|++.|+|||.+.+  ...++.++|+||+||++|+|++|..||...+.......+....+..     ...++..+.+
T Consensus       164 ~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (267)
T cd06646         164 KSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHN  243 (267)
T ss_pred             CccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHH
Confidence            34468899999999853  2335788999999999999999999996554333222222222221     1236789999


Q ss_pred             HHHHccccCcCCCCCHHHHhcCcc
Q psy6203         238 IVRSMLQVEPGKRIKIQDLLGHNW  261 (568)
Q Consensus       238 li~~~L~~dP~~Rps~~ell~hp~  261 (568)
                      +|++||+.||++|||++++++|+|
T Consensus       244 li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         244 FVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             HHHHHhhCChhhCcCHHHHhcCCC
Confidence            999999999999999999999987


No 142
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00  E-value=8.1e-43  Score=343.96  Aligned_cols=251  Identities=28%  Similarity=0.508  Sum_probs=221.6

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      +|++.+.||.|+||.||+|.+..+++.||+|++.+....  .....+.+|+.++++++||||+++++.+.+.+..++|||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD   80 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence            589999999999999999999999999999999865432  235678889999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          87 YCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        87 ~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      |+.|++|.+++.....+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......  ....
T Consensus        81 ~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--~~~~  158 (258)
T cd05578          81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT--LTTS  158 (258)
T ss_pred             CCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--cccc
Confidence            99999999999887889999999999999999999999999999999999999999999999999987654331  2234


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCC---HHHHHHHHHcCCCCCCCCCChHHHHHHHHcc
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS---IDQLYDKILNGKYTEPPWMSPNSRQIVRSML  243 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~---~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L  243 (568)
                      ..|+..|+|||.+.+.. ++.++|+||||+++|+|++|..||...+   ...+...........+...++.+.++|.+||
T Consensus       159 ~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  237 (258)
T cd05578         159 TSGTPGYMAPEVLCRQG-YSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWSTEAIDAINKLL  237 (258)
T ss_pred             cCCChhhcCHHHHcccC-CCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhccccccCcccCcHHHHHHHHHHc
Confidence            56888999999998766 6889999999999999999999998766   4444444443555667778999999999999


Q ss_pred             ccCcCCCCCH--HHHhcCccc
Q psy6203         244 QVEPGKRIKI--QDLLGHNWV  262 (568)
Q Consensus       244 ~~dP~~Rps~--~ell~hp~~  262 (568)
                      +.||.+||++  +|+++||||
T Consensus       238 ~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         238 ERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             cCChhHcCCccHHHHhcCCCC
Confidence            9999999999  999999997


No 143
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00  E-value=1.6e-42  Score=348.39  Aligned_cols=258  Identities=30%  Similarity=0.468  Sum_probs=218.7

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      ...+.|++.+.||+|+||.||+|++..++..||+|++.... ......+..|+.+++.++||||+++++.+..++..|+|
T Consensus         9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   87 (292)
T cd06644           9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIM   87 (292)
T ss_pred             CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEE
Confidence            45578999999999999999999999999999999987543 22345678899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          85 IEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      |||+++++|..++.+ ...+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++...... ...
T Consensus        88 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-~~~  166 (292)
T cd06644          88 IEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT-LQR  166 (292)
T ss_pred             EecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccc-ccc
Confidence            999999999888765 467899999999999999999999999999999999999999999999999987653322 112


Q ss_pred             cccccCCccccccccccC----cccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC---CCCCCChHHH
Q psy6203         164 LQTSCGSPNYAAPEVIKG----KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT---EPPWMSPNSR  236 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~----~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~---~~~~~~~~~~  236 (568)
                      .....+++.|+|||++.+    ...++.++|||||||++|+|++|..||...+.......+.....+   .+..++.++.
T Consensus       167 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (292)
T cd06644         167 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFR  246 (292)
T ss_pred             cceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHH
Confidence            234468899999999853    223577899999999999999999999877666655555544332   2445788999


Q ss_pred             HHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         237 QIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       237 ~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      ++|.+||+.||++||+++++++||||..
T Consensus       247 ~li~~~l~~~p~~Rp~~~~il~~~~~~~  274 (292)
T cd06644         247 DFLKTALDKHPETRPSAAQLLEHPFVSS  274 (292)
T ss_pred             HHHHHHhcCCcccCcCHHHHhcCccccc
Confidence            9999999999999999999999999974


No 144
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00  E-value=2e-42  Score=350.01  Aligned_cols=256  Identities=29%  Similarity=0.544  Sum_probs=221.3

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++.+.||+|+||.||++.+..+++.||+|.+......  .....+.+|+.+++.++||||+++++.+..++.+|+||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~   80 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM   80 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence            5799999999999999999999999999999998765431  23456778999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc----
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE----  161 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~----  161 (568)
                      ||++|++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++.......    
T Consensus        81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (305)
T cd05609          81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLY  160 (305)
T ss_pred             ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccccc
Confidence            9999999999998888899999999999999999999999999999999999999999999999998763211000    


Q ss_pred             ----------cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC---
Q psy6203         162 ----------SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEP---  228 (568)
Q Consensus       162 ----------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~---  228 (568)
                                .......++..|+|||.+.+.. ++.++|||||||++|+|++|..||.+.+..++...+..+....+   
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  239 (305)
T cd05609         161 EGHIEKDTREFLDKQVCGTPEYIAPEVILRQG-YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGD  239 (305)
T ss_pred             ccccccchhhccccCCccCccccCchhccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCcc
Confidence                      0111235788999999987765 58999999999999999999999998888888887776654332   


Q ss_pred             CCCChHHHHHHHHccccCcCCCCC---HHHHhcCccccc
Q psy6203         229 PWMSPNSRQIVRSMLQVEPGKRIK---IQDLLGHNWVKM  264 (568)
Q Consensus       229 ~~~~~~~~~li~~~L~~dP~~Rps---~~ell~hp~~~~  264 (568)
                      ..+++++.++|.+||+.||++||+   +.++++||||..
T Consensus       240 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~  278 (305)
T cd05609         240 EALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLG  278 (305)
T ss_pred             ccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccC
Confidence            247889999999999999999998   799999999974


No 145
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=100.00  E-value=3.1e-42  Score=347.08  Aligned_cols=259  Identities=30%  Similarity=0.493  Sum_probs=221.8

Q ss_pred             ccccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEE
Q psy6203           3 YIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIF   82 (568)
Q Consensus         3 ~~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   82 (568)
                      +.+...+|++.+.||.|++|.||+|.+..+|+.||+|.+..... .....+.+|+.+++.++||||+++++++...+..|
T Consensus        14 ~~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   92 (296)
T cd06655          14 IGDPKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ-PKKELIINEILVMKELKNPNIVNFLDSFLVGDELF   92 (296)
T ss_pred             cCCCcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC-chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEE
Confidence            34556789999999999999999999999999999999875432 33567788999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc
Q psy6203          83 MVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES  162 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  162 (568)
                      +|+||+++++|..++.. ..+++.++..++.|++.||.|||++|++||||||+||+++.++.+||+|||++....... .
T Consensus        93 lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~-~  170 (296)
T cd06655          93 VVMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ-S  170 (296)
T ss_pred             EEEEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccc-c
Confidence            99999999999998864 468999999999999999999999999999999999999999999999999987544321 1


Q ss_pred             ccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC---CCCCCCCChHHHHHH
Q psy6203         163 QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK---YTEPPWMSPNSRQIV  239 (568)
Q Consensus       163 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~li  239 (568)
                      ......+++.|+|||.+.+.. ++.++|||||||++|+|++|..||...+.......+....   ...+..+++.+.++|
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  249 (296)
T cd06655         171 KRSTMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFL  249 (296)
T ss_pred             cCCCcCCCccccCcchhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHH
Confidence            223456889999999988765 5889999999999999999999998876654444443322   223455789999999


Q ss_pred             HHccccCcCCCCCHHHHhcCcccccC
Q psy6203         240 RSMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       240 ~~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                      .+||..||.+|||+.+++.||||+..
T Consensus       250 ~~~l~~dp~~Rpt~~~il~~~~~~~~  275 (296)
T cd06655         250 NRCLEMDVEKRGSAKELLQHPFLKLA  275 (296)
T ss_pred             HHHhhcChhhCCCHHHHhhChHhhhc
Confidence            99999999999999999999999854


No 146
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00  E-value=7.4e-43  Score=356.79  Aligned_cols=253  Identities=23%  Similarity=0.362  Sum_probs=206.1

Q ss_pred             EEeeeccc--CCeEEEEEEEcCCCcEEEEEEeecCCcCC-chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEecc
Q psy6203          12 LERTVGSG--GFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYC   88 (568)
Q Consensus        12 i~~~lG~G--~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~   88 (568)
                      ++++||+|  +|++||++.++.+|+.||+|++....... ....+.+|+.+++.++||||+++++++..++..|+||||+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~   81 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM   81 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence            57889999  78899999999999999999997654332 3456778999999999999999999999999999999999


Q ss_pred             CCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc-----
Q psy6203          89 PGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE-----  161 (568)
Q Consensus        89 ~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-----  161 (568)
                      ++|+|.+++...  ..+++..++.++.|++.||.|||++||+||||||+||+++.++.++++|||.+........     
T Consensus        82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~  161 (327)
T cd08227          82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVV  161 (327)
T ss_pred             CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhcccccccccccc
Confidence            999999999653  4589999999999999999999999999999999999999999999999986543211100     


Q ss_pred             -cccccccCCccccccccccCc-ccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-------------
Q psy6203         162 -SQLQTSCGSPNYAAPEVIKGK-QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-------------  226 (568)
Q Consensus       162 -~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~-------------  226 (568)
                       .......++..|+|||++.+. ..++.++|||||||++|+|++|..||..............+..+             
T Consensus       162 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (327)
T cd08227         162 HDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEEL  241 (327)
T ss_pred             ccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhc
Confidence             011223567889999999763 34688999999999999999999999765544333332222111             


Q ss_pred             ---------------------------------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         227 ---------------------------------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       227 ---------------------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                                                       ....+++.+.+||.+||+.||++|||++|+++||||+.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~  312 (327)
T cd08227         242 TMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ  312 (327)
T ss_pred             ccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhh
Confidence                                             01124678999999999999999999999999999973


No 147
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00  E-value=1.2e-42  Score=384.27  Aligned_cols=257  Identities=26%  Similarity=0.487  Sum_probs=214.9

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC-chHHHHHHHHHHHhCCCCCcceeeEEEEe--CCEE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQVIET--SSHI   81 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~--~~~~   81 (568)
                      .+.++|++++.||+|+||+||+|.+..++..||+|++....... ....+..|+.++++|+|||||+++++|.+  ...+
T Consensus        10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l   89 (1021)
T PTZ00266         10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL   89 (1021)
T ss_pred             cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence            34579999999999999999999999999999999987654332 34568889999999999999999998854  4578


Q ss_pred             EEEEeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHc-------CceecCCCCCceEEcC---------
Q psy6203          82 FMVIEYCPGGELLDHIVE----RQRLGEKESRAFFRQILSAVAYLHHL-------GYAHRDLKPENVLLDR---------  141 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~aL~~LH~~-------~ivHrDlkp~NIll~~---------  141 (568)
                      ||||||+++|+|.++|..    ...+++..++.|+.||+.||.|||+.       +||||||||+||||+.         
T Consensus        90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~  169 (1021)
T PTZ00266         90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT  169 (1021)
T ss_pred             EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence            999999999999999875    25799999999999999999999984       4999999999999964         


Q ss_pred             --------CCCeEEEeecCccCCCCCCccccccccCCccccccccccCc-ccCCcccceechhhHHHHHHhCCCCCCCCC
Q psy6203         142 --------NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK-QYYGSETDVWSMGVMLYALLCGFLPFDSDS  212 (568)
Q Consensus       142 --------~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlG~il~~lltG~~pf~~~~  212 (568)
                              .+.+||+|||++......  ......+||+.|+|||++.+. ..++.++||||||||+|+|++|..||...+
T Consensus       170 ~~~~n~ng~~iVKLsDFGlAr~l~~~--s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~  247 (1021)
T PTZ00266        170 AQANNLNGRPIAKIGDFGLSKNIGIE--SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN  247 (1021)
T ss_pred             ccccccCCCCceEEccCCcccccccc--ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC
Confidence                    235899999998765332  223455799999999998643 346889999999999999999999997554


Q ss_pred             -HHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q psy6203         213 -IDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       213 -~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                       ...+...+..+........++++.+||..||+.+|.+||++.|+|.|||++
T Consensus       248 ~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik  299 (1021)
T PTZ00266        248 NFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIK  299 (1021)
T ss_pred             cHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHh
Confidence             444555554443333345789999999999999999999999999999997


No 148
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00  E-value=1.8e-42  Score=346.18  Aligned_cols=255  Identities=28%  Similarity=0.455  Sum_probs=217.4

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      +.|++.+.||+|+||.||+|.+..++..+|+|.+..... .....+.+|+.+++.++||||+++++++...+..|+||||
T Consensus         5 ~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~   83 (282)
T cd06643           5 EFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSE-EELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   83 (282)
T ss_pred             HHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCH-HHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence            457899999999999999999999999999999865432 2345678899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          88 CPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        88 ~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      +++++|..++.. ...+++..+..++.|++.||.|||+.||+||||||+||+++.++.+||+|||++...... ......
T Consensus        84 ~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~-~~~~~~  162 (282)
T cd06643          84 CAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT-IQRRDS  162 (282)
T ss_pred             cCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccc-cccccc
Confidence            999999888765 467999999999999999999999999999999999999999999999999998754332 122334


Q ss_pred             ccCCccccccccccC----cccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC---CCCCCCChHHHHHH
Q psy6203         167 SCGSPNYAAPEVIKG----KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY---TEPPWMSPNSRQIV  239 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~----~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~li  239 (568)
                      ..+++.|+|||++..    ...++.++||||+||++|+|++|.+||...+..+....+.....   ..+..++..+.++|
T Consensus       163 ~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  242 (282)
T cd06643         163 FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFL  242 (282)
T ss_pred             ccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHH
Confidence            568999999999842    23357799999999999999999999988776665555554432   23445788999999


Q ss_pred             HHccccCcCCCCCHHHHhcCccccc
Q psy6203         240 RSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       240 ~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      .+||+.||.+|||++++++||||+.
T Consensus       243 ~~~l~~~p~~Rp~~~~il~~~~~~~  267 (282)
T cd06643         243 KKCLEKNVDARWTTTQLLQHPFVTV  267 (282)
T ss_pred             HHHccCChhhCcCHHHHhcCCCEec
Confidence            9999999999999999999999985


No 149
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00  E-value=3.1e-42  Score=340.22  Aligned_cols=253  Identities=30%  Similarity=0.469  Sum_probs=217.6

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      .++|++.+.||+|+||.||+|.+..+++.+|+|++..... +....+.+|+.++++++||||+++++++.+.+.+|++||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e   80 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG-DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVME   80 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch-hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEe
Confidence            5789999999999999999999999999999999976543 245678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          87 YCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        87 ~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      |+++++|.+++... ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.+||+|||++....... ....
T Consensus        81 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-~~~~  159 (262)
T cd06613          81 YCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI-AKRK  159 (262)
T ss_pred             CCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhh-hccc
Confidence            99999999998776 789999999999999999999999999999999999999999999999999987644321 1223


Q ss_pred             cccCCccccccccccCc--ccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-----CCCCCChHHHHH
Q psy6203         166 TSCGSPNYAAPEVIKGK--QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-----EPPWMSPNSRQI  238 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~--~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~l  238 (568)
                      ...++..|+|||.+.+.  ..++.++|+|||||++|+|++|.+||...+.......+....+.     .+...+.++.++
T Consensus       160 ~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  239 (262)
T cd06613         160 SFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDF  239 (262)
T ss_pred             cccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHH
Confidence            45688899999998765  13578999999999999999999999877655544444444222     123356789999


Q ss_pred             HHHccccCcCCCCCHHHHhcCcc
Q psy6203         239 VRSMLQVEPGKRIKIQDLLGHNW  261 (568)
Q Consensus       239 i~~~L~~dP~~Rps~~ell~hp~  261 (568)
                      +.+||..||.+|||+++++.|+|
T Consensus       240 i~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         240 IKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             HHHHcCCChhhCCCHHHHhcCCC
Confidence            99999999999999999999998


No 150
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00  E-value=1.8e-42  Score=344.08  Aligned_cols=256  Identities=28%  Similarity=0.436  Sum_probs=213.8

Q ss_pred             cccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEeC----
Q psy6203           4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIETS----   78 (568)
Q Consensus         4 ~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~----   78 (568)
                      .+..+.|++.+.||+|+||.||+|.+..+++.||+|++....  .....+..|+.+++++ +||||+++++++...    
T Consensus         2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~   79 (272)
T cd06637           2 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG   79 (272)
T ss_pred             CChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC--ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCC
Confidence            356788999999999999999999999999999999987543  2345678899999998 699999999998653    


Q ss_pred             --CEEEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCcc
Q psy6203          79 --SHIFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCA  154 (568)
Q Consensus        79 --~~~~lV~E~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  154 (568)
                        ..+|+||||+++++|.+++...  ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||++.
T Consensus        80 ~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~  159 (272)
T cd06637          80 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSA  159 (272)
T ss_pred             CCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCce
Confidence              4689999999999999998763  468999999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCCccccccccCCccccccccccCc----ccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--CCC
Q psy6203         155 KPEGGLESQLQTSCGSPNYAAPEVIKGK----QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY--TEP  228 (568)
Q Consensus       155 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~--~~~  228 (568)
                      ..... ........|++.|+|||++.+.    ..++.++||||+||++|+|++|..||...........+.....  ...
T Consensus       160 ~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  238 (272)
T cd06637         160 QLDRT-VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKS  238 (272)
T ss_pred             ecccc-cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCC
Confidence            54322 1223455789999999998632    2367899999999999999999999976654444433333221  122


Q ss_pred             CCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         229 PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       229 ~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                      ...+..+.+|+.+||..||.+|||+.+++.||||
T Consensus       239 ~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         239 KKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             CCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            3467899999999999999999999999999997


No 151
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00  E-value=3.4e-42  Score=338.97  Aligned_cols=252  Identities=25%  Similarity=0.537  Sum_probs=221.1

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      +|++.+.||+|+||.||++.+..+|+.||+|.+...... .....+.+|+.++++++||||+++++++...+..++||||
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY   80 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence            699999999999999999999999999999998754332 2345788899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          88 CPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        88 ~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      +++++|.+.+....  .+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++....... ....
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~~~  159 (256)
T cd08218          81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV-ELAR  159 (256)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcch-hhhh
Confidence            99999999987643  57899999999999999999999999999999999999999999999999987554321 1223


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-CCCCCChHHHHHHHHccc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNSRQIVRSMLQ  244 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~li~~~L~  244 (568)
                      ...|++.|+|||++.+.. .+.++|+|||||++|+|++|..||...+..+....+..+... .+...+.++.++|.+||+
T Consensus       160 ~~~~~~~~~~pe~~~~~~-~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  238 (256)
T cd08218         160 TCIGTPYYLSPEICENRP-YNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPPVSSHYSYDLRNLVSQLFK  238 (256)
T ss_pred             hccCCccccCHHHhCCCC-CCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCCCcccCCHHHHHHHHHHhh
Confidence            345888999999998766 588999999999999999999999888887777777766654 455678999999999999


Q ss_pred             cCcCCCCCHHHHhcCccc
Q psy6203         245 VEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       245 ~dP~~Rps~~ell~hp~~  262 (568)
                      .+|++||++.++++||||
T Consensus       239 ~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         239 RNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             CChhhCcCHHHHhhCcCC
Confidence            999999999999999997


No 152
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00  E-value=9.7e-43  Score=348.70  Aligned_cols=254  Identities=26%  Similarity=0.414  Sum_probs=214.0

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC-chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++....... ..+.+.+|+.+++.++||||+++++++.+.+..|+|||
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   80 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE   80 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence            57999999999999999999999899999999987544322 24467789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          87 YCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        87 ~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      |+++++|..+......+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++....... .....
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~-~~~~~  159 (286)
T cd07846          81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG-EVYTD  159 (286)
T ss_pred             cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc-cccCc
Confidence            99999888887766679999999999999999999999999999999999999999999999999987644322 22334


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC--C-------------------C
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--K-------------------Y  225 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~--~-------------------~  225 (568)
                      ..++..|+|||++.+...++.++||||||+++|+|++|.+||...+..+....+...  .                   .
T Consensus       160 ~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (286)
T cd07846         160 YVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRL  239 (286)
T ss_pred             ccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhcccc
Confidence            567899999999877655688999999999999999999999776543332222210  0                   0


Q ss_pred             ----------CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         226 ----------TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       226 ----------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                                ...+.++..+.+|+.+||+.||++||++.+++.||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         240 PEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             ccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence                      0123467889999999999999999999999999998


No 153
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00  E-value=1.1e-42  Score=348.37  Aligned_cols=254  Identities=24%  Similarity=0.445  Sum_probs=215.5

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      ++|++.+.||+|+||.||+|.+..+|..||+|.+...........+.+|+.++++++||||+++++.+...+..|+||||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY   80 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence            47899999999999999999999999999999887543223345788899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHH-cCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          88 CPGGELLDHIVER---QRLGEKESRAFFRQILSAVAYLHH-LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        88 ~~~g~L~~~i~~~---~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      +++++|..++...   ..+++..+..++.||+.||.|||+ .||+||||||+||+++.++.+||+|||++......   .
T Consensus        81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---~  157 (286)
T cd06622          81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS---L  157 (286)
T ss_pred             cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC---c
Confidence            9999999888763   379999999999999999999997 59999999999999999999999999998754322   2


Q ss_pred             cccccCCccccccccccCcc-----cCCcccceechhhHHHHHHhCCCCCCCCCHHHHHH---HHHcCC-CCCCCCCChH
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQ-----YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYD---KILNGK-YTEPPWMSPN  234 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~-----~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~---~i~~~~-~~~~~~~~~~  234 (568)
                      .....+++.|+|||.+.+..     .++.++|||||||++|+|++|..||..........   .+..+. ...++.++++
T Consensus       158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (286)
T cd06622         158 AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDD  237 (286)
T ss_pred             cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHH
Confidence            23456888999999985432     24778999999999999999999997655444333   333333 3345568899


Q ss_pred             HHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         235 SRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       235 ~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      +.++|.+||+.+|++||+++++++||||..
T Consensus       238 ~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~  267 (286)
T cd06622         238 AQDFVAKCLNKIPNRRPTYAQLLEHPWLVK  267 (286)
T ss_pred             HHHHHHHHcccCcccCCCHHHHhcChhhhh
Confidence            999999999999999999999999999974


No 154
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=100.00  E-value=2.1e-42  Score=348.49  Aligned_cols=259  Identities=29%  Similarity=0.477  Sum_probs=219.6

Q ss_pred             ccccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEE
Q psy6203           3 YIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIF   82 (568)
Q Consensus         3 ~~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   82 (568)
                      +.+...+|++.+.||+|+||.||+|.+..+++.||+|.+..... .....+.+|+.+++.++||||+++++++...+..|
T Consensus        14 ~~~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~   92 (297)
T cd06656          14 VGDPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLVGDELW   92 (297)
T ss_pred             cCChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc-chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEE
Confidence            45677899999999999999999999999999999999875443 23456788999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc
Q psy6203          83 MVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES  162 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  162 (568)
                      +||||+++++|.+++.+ ..+++..+..++.|++.||.|||+.||+||||||+||+++.++.++|+|||++....... .
T Consensus        93 lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~-~  170 (297)
T cd06656          93 VVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-S  170 (297)
T ss_pred             EeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCc-c
Confidence            99999999999998854 568999999999999999999999999999999999999999999999999987543321 1


Q ss_pred             ccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc-CCC--CCCCCCChHHHHHH
Q psy6203         163 QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN-GKY--TEPPWMSPNSRQIV  239 (568)
Q Consensus       163 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~-~~~--~~~~~~~~~~~~li  239 (568)
                      ......+++.|+|||.+.+.. ++.++|+|||||++|+|++|..||...+.......+.. +..  ..+..+++.+.+++
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  249 (297)
T cd06656         171 KRSTMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFL  249 (297)
T ss_pred             CcCcccCCccccCHHHHcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHH
Confidence            223456889999999998765 58899999999999999999999977654332222222 221  23445788899999


Q ss_pred             HHccccCcCCCCCHHHHhcCcccccC
Q psy6203         240 RSMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       240 ~~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                      .+||..||++|||+++++.||||+..
T Consensus       250 ~~~l~~~p~~Rps~~~il~~~~~~~~  275 (297)
T cd06656         250 NRCLEMDVDRRGSAKELLQHPFLKLA  275 (297)
T ss_pred             HHHccCChhhCcCHHHHhcCchhccc
Confidence            99999999999999999999999843


No 155
>KOG0574|consensus
Probab=100.00  E-value=1.6e-45  Score=343.31  Aligned_cols=253  Identities=28%  Similarity=0.463  Sum_probs=217.4

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      +-|.++.+||+|+||.||+|.|+.+|..+|+|.+.-   ..+.+.+..|+.+|++++.|+||++|+.+-....++|||||
T Consensus        33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV---~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEY  109 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV---DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEY  109 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc---cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhh
Confidence            347788999999999999999999999999998764   35788899999999999999999999999888999999999


Q ss_pred             cCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          88 CPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        88 ~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      |..|+..+.++. +++++|+++..+++..+.||+|||...-+|||||..|||++.+|..||+|||.|...... ....++
T Consensus       110 CGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT-MAKRNT  188 (502)
T KOG0574|consen  110 CGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT-MAKRNT  188 (502)
T ss_pred             cCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhh-HHhhCc
Confidence            999999999985 578999999999999999999999999999999999999999999999999998765543 233467


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC---CCCCCCCCChHHHHHHHHcc
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG---KYTEPPWMSPNSRQIVRSML  243 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~li~~~L  243 (568)
                      ..|||.|||||++..-. |+.++||||||++..||..|++||..-.+....-.|-..   .+..|...|.++.|||++||
T Consensus       189 VIGTPFWMAPEVI~EIG-Y~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CL  267 (502)
T KOG0574|consen  189 VIGTPFWMAPEVIEEIG-YDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCL  267 (502)
T ss_pred             cccCcccccHHHHHHhc-cchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHh
Confidence            78999999999998776 588999999999999999999999654332211111111   11123346788999999999


Q ss_pred             ccCcCCCCCHHHHhcCcccccC
Q psy6203         244 QVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       244 ~~dP~~Rps~~ell~hp~~~~~  265 (568)
                      .++|++|.|+.++++|||++..
T Consensus       268 iK~PE~R~TA~~L~~H~FiknA  289 (502)
T KOG0574|consen  268 IKKPEERKTALRLCEHTFIKNA  289 (502)
T ss_pred             cCCHHHHHHHHHHhhhhhhcCC
Confidence            9999999999999999999853


No 156
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00  E-value=3.4e-42  Score=353.26  Aligned_cols=260  Identities=29%  Similarity=0.447  Sum_probs=210.9

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeC-----C
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETS-----S   79 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~-----~   79 (568)
                      ++.++|++.+.||+|+||.||+|.+..+|+.||+|.+...........+..|+.++++++||||+++++++...     .
T Consensus         2 ~~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   81 (336)
T cd07849           2 DVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN   81 (336)
T ss_pred             ccccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence            46789999999999999999999999999999999986433233345677899999999999999999987544     3


Q ss_pred             EEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCC
Q psy6203          80 HIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGG  159 (568)
Q Consensus        80 ~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  159 (568)
                      ..|+||||+. ++|.+.+. ...+++..++.++.|++.||.|||+.||+||||||+||+++.++.+||+|||++......
T Consensus        82 ~~~lv~e~~~-~~l~~~~~-~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~  159 (336)
T cd07849          82 DVYIVQELME-TDLYKLIK-TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPE  159 (336)
T ss_pred             eEEEEehhcc-cCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecccc
Confidence            5899999995 58887774 467999999999999999999999999999999999999999999999999998754332


Q ss_pred             Cc--cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc---------------
Q psy6203         160 LE--SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN---------------  222 (568)
Q Consensus       160 ~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~---------------  222 (568)
                      ..  .......|++.|+|||.+.+...++.++||||+||++|+|++|+.||.+.+.......+..               
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (336)
T cd07849         160 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIIS  239 (336)
T ss_pred             ccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhc
Confidence            11  1123356899999999886655568899999999999999999999976654332221110               


Q ss_pred             C-----------CCC-----CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCcccccCC
Q psy6203         223 G-----------KYT-----EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGP  266 (568)
Q Consensus       223 ~-----------~~~-----~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  266 (568)
                      .           ...     ..+..++++.++|.+||+.||++|||+.|+++||||+...
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~  299 (336)
T cd07849         240 LRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYH  299 (336)
T ss_pred             hhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccC
Confidence            0           000     0134578899999999999999999999999999998543


No 157
>KOG0986|consensus
Probab=100.00  E-value=7.9e-44  Score=348.89  Aligned_cols=256  Identities=27%  Similarity=0.449  Sum_probs=228.6

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      .+.|+.-++||+|+||.||-|+.+.||+.||+|.+.+..+..  ......+|-.+|.+++.+.||.+--.|++.+.+|+|
T Consensus       184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV  263 (591)
T KOG0986|consen  184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV  263 (591)
T ss_pred             ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence            367888999999999999999999999999999987665432  233566799999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc
Q psy6203          85 IEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES  162 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  162 (568)
                      |..|.||+|.-+|.+.+  .+++..+..++.+|+.||++||+.+||.|||||+|||+|+.|+++|+|+|+|.....+.  
T Consensus       264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~--  341 (591)
T KOG0986|consen  264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK--  341 (591)
T ss_pred             EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCC--
Confidence            99999999999998765  79999999999999999999999999999999999999999999999999999877653  


Q ss_pred             ccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCC----CHHHHHHHHHcCCCCCCCCCChHHHHH
Q psy6203         163 QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSD----SIDQLYDKILNGKYTEPPWMSPNSRQI  238 (568)
Q Consensus       163 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~----~~~~~~~~i~~~~~~~~~~~~~~~~~l  238 (568)
                      .....+||.+|||||++.+.. |+...|.|||||++|+|+.|+.||...    ..+++-+++.......+..+|+++++|
T Consensus       342 ~~~~rvGT~GYMAPEvl~ne~-Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS~eaksl  420 (591)
T KOG0986|consen  342 PIRGRVGTVGYMAPEVLQNEV-YDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFSEEAKSL  420 (591)
T ss_pred             ccccccCcccccCHHHHcCCc-ccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccCHHHHHH
Confidence            344558999999999999887 799999999999999999999999653    345667777777777888999999999


Q ss_pred             HHHccccCcCCCCC-----HHHHhcCcccccC
Q psy6203         239 VRSMLQVEPGKRIK-----IQDLLGHNWVKMG  265 (568)
Q Consensus       239 i~~~L~~dP~~Rps-----~~ell~hp~~~~~  265 (568)
                      .+.+|++||.+|..     ++++.+||||+.-
T Consensus       421 c~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~l  452 (591)
T KOG0986|consen  421 CEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDL  452 (591)
T ss_pred             HHHHHccCHHHhccCCCcCcchhhhCcccccC
Confidence            99999999999984     7799999999853


No 158
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the 
Probab=100.00  E-value=5.1e-42  Score=344.55  Aligned_cols=253  Identities=27%  Similarity=0.461  Sum_probs=207.5

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      ++|++.+.||+|++|.||+|.++.+++.||+|.+...........+.+|+.++++++||||+++++++.+.+..|+||||
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY   84 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence            78999999999999999999999899999999987654333334567899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          88 CPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        88 ~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      +. ++|.+++... ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||++....... .....
T Consensus        85 ~~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-~~~~~  162 (291)
T cd07844          85 LD-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPS-KTYSN  162 (291)
T ss_pred             CC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCC-ccccc
Confidence            97 4899988654 468999999999999999999999999999999999999999999999999986543211 11122


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCC-HHHHHHHHHcC-------------------C--
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKILNG-------------------K--  224 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~-~~~~~~~i~~~-------------------~--  224 (568)
                      ..++..|+|||++.+...++.++||||+||++|+|++|..||.... ..+....+...                   .  
T Consensus       163 ~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (291)
T cd07844         163 EVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYS  242 (291)
T ss_pred             cccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccccc
Confidence            3468899999998765556889999999999999999999997654 22222211110                   0  


Q ss_pred             CC---------CCCCCC--hHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         225 YT---------EPPWMS--PNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       225 ~~---------~~~~~~--~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                      ..         ..+.++  .++.+++.+||+.||.+|||+.+++.||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         243 FPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             ccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            00         001233  788999999999999999999999999998


No 159
>KOG0662|consensus
Probab=100.00  E-value=3.4e-43  Score=305.25  Aligned_cols=255  Identities=28%  Similarity=0.477  Sum_probs=218.8

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCch-HHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDL-PRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~-~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      .+|.-.++||+|.||+|++|++..+++.||+|.+......+.. ....+||-+|+.++|.|||+++++...+..+.+|+|
T Consensus         2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe   81 (292)
T KOG0662|consen    2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE   81 (292)
T ss_pred             cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence            3577788999999999999999999999999999876554433 457789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          87 YCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        87 ~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      ||. .+|..+... ++.+..+.++.++.|+++||.|||++++.||||||+|+||+.+|.+|++|||+++....... -..
T Consensus        82 ~cd-qdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvr-cys  159 (292)
T KOG0662|consen   82 FCD-QDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR-CYS  159 (292)
T ss_pred             Hhh-HHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceE-eee
Confidence            994 577777754 57899999999999999999999999999999999999999999999999999987665422 234


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHc--CCCCCC--------------
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILN--GKYTEP--------------  228 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~--~~~~~~--------------  228 (568)
                      ..+.|.+|.+|.++.|...|+...|+||.|||+.|+.. |.+.|.+.+..+...+|..  |.+...              
T Consensus       160 aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~y  239 (292)
T KOG0662|consen  160 AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPY  239 (292)
T ss_pred             ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCccc
Confidence            45679999999999999999999999999999999987 7888999998887777743  111110              


Q ss_pred             -------------CCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         229 -------------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       229 -------------~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                                   +.++...+++++++|.-+|.+|++++++++||||..
T Consensus       240 p~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~d  288 (292)
T KOG0662|consen  240 PIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFSD  288 (292)
T ss_pred             CCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccccc
Confidence                         123445689999999999999999999999999973


No 160
>KOG4279|consensus
Probab=100.00  E-value=1.5e-43  Score=361.26  Aligned_cols=250  Identities=26%  Similarity=0.437  Sum_probs=215.5

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCCCh
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGEL   93 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g~L   93 (568)
                      -+||+|+||+||.|++..|....|||.+..... ...+.+..||.+.++|+|.|||++++.+..++.+-|.||-++||+|
T Consensus       581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekds-r~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL  659 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS-REVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL  659 (1226)
T ss_pred             EEeecCceeEEEeeccccceeEEEeeecccccc-hhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence            369999999999999999999999999876543 3456788899999999999999999999999999999999999999


Q ss_pred             HHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEc-CCCCeEEEeecCccCCCCCCccccccccC
Q psy6203          94 LDHIVER-QRL--GEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLD-RNQNLKLIDFGLCAKPEGGLESQLQTSCG  169 (568)
Q Consensus        94 ~~~i~~~-~~l--~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~-~~~~~kl~DFG~a~~~~~~~~~~~~~~~g  169 (568)
                      .++++.+ +++  +|.....+.+||++||.|||++.|||||||-+|+|++ -.|.+||+|||-++...+ ......++.|
T Consensus       660 SsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg-inP~TETFTG  738 (1226)
T KOG4279|consen  660 SSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG-INPCTETFTG  738 (1226)
T ss_pred             HHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhcc-CCcccccccc
Confidence            9999864 777  7888999999999999999999999999999999996 468999999999887543 3455677889


Q ss_pred             Ccccccccccc-CcccCCcccceechhhHHHHHHhCCCCCCCC-CHHHHHHH--HHcCCCCCCCCCChHHHHHHHHcccc
Q psy6203         170 SPNYAAPEVIK-GKQYYGSETDVWSMGVMLYALLCGFLPFDSD-SIDQLYDK--ILNGKYTEPPWMSPNSRQIVRSMLQV  245 (568)
Q Consensus       170 t~~y~aPE~l~-~~~~~~~~~DiwSlG~il~~lltG~~pf~~~-~~~~~~~~--i~~~~~~~~~~~~~~~~~li~~~L~~  245 (568)
                      |..|||||++. |...|+.++|||||||++.||.||++||... +.+..+-+  +.+..++.|..++.+++.||.+|+.+
T Consensus       739 TLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFep  818 (1226)
T KOG4279|consen  739 TLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEP  818 (1226)
T ss_pred             chhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCC
Confidence            99999999995 4456899999999999999999999999543 33322222  22334566777889999999999999


Q ss_pred             CcCCCCCHHHHhcCcccccC
Q psy6203         246 EPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       246 dP~~Rps~~ell~hp~~~~~  265 (568)
                      ||.+||+|.++|..||+...
T Consensus       819 d~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  819 DPCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             CcccCccHHHhccCcccccC
Confidence            99999999999999999855


No 161
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00  E-value=5.3e-42  Score=339.84  Aligned_cols=254  Identities=28%  Similarity=0.487  Sum_probs=212.8

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC----CchHHHHHHHHHHHhCCCCCcceeeEEEEe--CCEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG----EDLPRVKLEINALKHISHQHICKLFQVIET--SSHI   81 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~--~~~~   81 (568)
                      .+|++.+.||+|+||.||+|.+..++..||+|.+......    .....+.+|+.++++++||||+++++++.+  ...+
T Consensus         2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            5799999999999999999999999999999998754322    123467889999999999999999999865  3678


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC-
Q psy6203          82 FMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL-  160 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-  160 (568)
                      +++|||+++++|.+.+...+.+++..++.++.|++.||.|||+++|+||||||+||+++.++.+||+|||++....... 
T Consensus        82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~  161 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICM  161 (266)
T ss_pred             EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccc
Confidence            9999999999999999888889999999999999999999999999999999999999999999999999987543211 


Q ss_pred             -ccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCCCCCChHHHH
Q psy6203         161 -ESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--KYTEPPWMSPNSRQ  237 (568)
Q Consensus       161 -~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~  237 (568)
                       ........++..|+|||.+.+.. ++.++||||+||++|+|++|+.||......+....+...  ....+..+++.+++
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (266)
T cd06651         162 SGTGIRSVTGTPYWMSPEVISGEG-YGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARD  240 (266)
T ss_pred             cCCccccCCccccccCHHHhCCCC-CCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHH
Confidence             11122345888999999998765 588999999999999999999999876544444333322  22335567888999


Q ss_pred             HHHHccccCcCCCCCHHHHhcCcccc
Q psy6203         238 IVRSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       238 li~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                      ++ +||..+|++|||++|+++||||+
T Consensus       241 li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         241 FL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             HH-HHhcCChhhCcCHHHHhcCcccc
Confidence            99 67778999999999999999996


No 162
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00  E-value=5.9e-42  Score=337.16  Aligned_cols=249  Identities=29%  Similarity=0.510  Sum_probs=218.1

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEecc
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYC   88 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~   88 (568)
                      +|++.+.||+|+||.||++.+..++..+|+|.++........+.+..|+.+++.++||||+++++.+.+.+.+|+||||+
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC   80 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence            58999999999999999999999999999999875543344567888999999999999999999999999999999999


Q ss_pred             CCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          89 PGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        89 ~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      ++++|.+++...  ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||.+....... .....
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-~~~~~  159 (255)
T cd08219          81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-AYACT  159 (255)
T ss_pred             CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccc-ccccc
Confidence            999999988653  458999999999999999999999999999999999999999999999999987543321 12234


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-CCCCCChHHHHHHHHcccc
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNSRQIVRSMLQV  245 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~li~~~L~~  245 (568)
                      ..|++.|+|||++.+.. ++.++|+||||+++|+|++|..||...+.......+..+... .+..++..+.++|.+||+.
T Consensus       160 ~~~~~~~~aPE~~~~~~-~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  238 (255)
T cd08219         160 YVGTPYYVPPEIWENMP-YNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKPLPSHYSYELRSLIKQMFKR  238 (255)
T ss_pred             ccCCccccCHHHHccCC-cCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHHhC
Confidence            56889999999998766 588999999999999999999999988887777777666554 4556889999999999999


Q ss_pred             CcCCCCCHHHHhcC
Q psy6203         246 EPGKRIKIQDLLGH  259 (568)
Q Consensus       246 dP~~Rps~~ell~h  259 (568)
                      ||++|||+.+++.-
T Consensus       239 ~P~~Rp~~~~il~~  252 (255)
T cd08219         239 NPRSRPSATTILSR  252 (255)
T ss_pred             CcccCCCHHHHhhc
Confidence            99999999999864


No 163
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00  E-value=1e-41  Score=335.57  Aligned_cols=252  Identities=31%  Similarity=0.491  Sum_probs=223.0

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      +|++.+.||.|+||.|+.+++..+++.+|+|.+...... .....+.+|+.++++++|+||+++++++.+.+..++||||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~   80 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY   80 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence            699999999999999999999999999999998765432 3345678899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          88 CPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        88 ~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      +++++|.+++...  ..+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||++....... ....
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~-~~~~  159 (256)
T cd08221          81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY-SMAE  159 (256)
T ss_pred             cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccc-cccc
Confidence            9999999999765  468999999999999999999999999999999999999999999999999987654322 1234


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC-CCCCChHHHHHHHHccc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE-PPWMSPNSRQIVRSMLQ  244 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~li~~~L~  244 (568)
                      ...|++.|+|||.+.+.. ++.++|+||||+++|+|++|..||...+..+....+..+.+.. +...+.++.++|.+||.
T Consensus       160 ~~~~~~~y~ape~~~~~~-~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  238 (256)
T cd08221         160 TVVGTPYYMSPELCQGVK-YNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPVVSVYSSELISLVHSLLQ  238 (256)
T ss_pred             ccCCCccccCHhhcCCCC-CCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccCHHHHHHHHHHcc
Confidence            456899999999988765 5889999999999999999999999888888888877776543 34578999999999999


Q ss_pred             cCcCCCCCHHHHhcCccc
Q psy6203         245 VEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       245 ~dP~~Rps~~ell~hp~~  262 (568)
                      .+|.+|||+.++++|||+
T Consensus       239 ~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         239 QDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             cCcccCCCHHHHhhCcCC
Confidence            999999999999999986


No 164
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is 
Probab=100.00  E-value=3.7e-42  Score=346.74  Aligned_cols=259  Identities=28%  Similarity=0.403  Sum_probs=216.1

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC---C-chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG---E-DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      +|++.+.||+|++|.||+|.+..+|+.||+|.+......   . ....+..|+.+++.++|+||+++++++.+.+..++|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            589999999999999999999999999999999865443   1 233566799999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          85 IEYCPGGELLDHIVERQ-RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      |||+ +++|.+++.... .+++..+..++.||++||.|||++||+|+||+|+||+++.++.++|+|||++....... ..
T Consensus        81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~-~~  158 (298)
T cd07841          81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN-RK  158 (298)
T ss_pred             Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC-cc
Confidence            9999 899999997765 79999999999999999999999999999999999999999999999999987654321 22


Q ss_pred             cccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC--C----------------
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK--Y----------------  225 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~--~----------------  225 (568)
                      .....+++.|+|||.+.+...++.++|||||||++|+|++|.+||.+.+.......+....  .                
T Consensus       159 ~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (298)
T cd07841         159 MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVE  238 (298)
T ss_pred             ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhccccccccc
Confidence            2334568899999998765556889999999999999999988887766544444432210  0                


Q ss_pred             -----C-----CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCcccccCCCCC
Q psy6203         226 -----T-----EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDN  269 (568)
Q Consensus       226 -----~-----~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~~~~  269 (568)
                           .     .....+..+.++|.+||+.||++|||+.|++.||||...+...
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~  292 (298)
T cd07841         239 FKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPT  292 (298)
T ss_pred             ccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCC
Confidence                 0     0123467889999999999999999999999999999655433


No 165
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00  E-value=4.6e-42  Score=339.34  Aligned_cols=245  Identities=36%  Similarity=0.683  Sum_probs=216.6

Q ss_pred             ecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCCCh
Q psy6203          16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGEL   93 (568)
Q Consensus        16 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g~L   93 (568)
                      ||.|++|.||+|.+..+++.||+|++.+....  .....+.+|+.+++.++||||+++++.+.+++..|+||||+++++|
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL   80 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence            69999999999999999999999999765432  2346788899999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCCccc
Q psy6203          94 LDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNY  173 (568)
Q Consensus        94 ~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y  173 (568)
                      .+++.....+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......  ......|++.|
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~--~~~~~~~~~~~  158 (262)
T cd05572          81 WTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ--KTWTFCGTPEY  158 (262)
T ss_pred             HHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc--ccccccCCcCc
Confidence            9999888889999999999999999999999999999999999999999999999999987654331  22344688999


Q ss_pred             cccccccCcccCCcccceechhhHHHHHHhCCCCCCCCC--HHHHHHHHH--cCCCCCCCCCChHHHHHHHHccccCcCC
Q psy6203         174 AAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS--IDQLYDKIL--NGKYTEPPWMSPNSRQIVRSMLQVEPGK  249 (568)
Q Consensus       174 ~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~--~~~~~~~i~--~~~~~~~~~~~~~~~~li~~~L~~dP~~  249 (568)
                      +|||.+.+.. ++.++|+||+|+++|+|++|..||....  .......+.  ......+...++++.++|.+||+.||++
T Consensus       159 ~~PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~  237 (262)
T cd05572         159 VAPEIILNKG-YDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEE  237 (262)
T ss_pred             cChhHhcCCC-CCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhh
Confidence            9999987665 5889999999999999999999998766  666666666  3455566667899999999999999999


Q ss_pred             CCC-----HHHHhcCcccc
Q psy6203         250 RIK-----IQDLLGHNWVK  263 (568)
Q Consensus       250 Rps-----~~ell~hp~~~  263 (568)
                      ||+     ++|+++||||+
T Consensus       238 R~~~~~~~~~~l~~~~~~~  256 (262)
T cd05572         238 RLGNLKGGIKDIKKHKWFN  256 (262)
T ss_pred             CcCCcccCHHHHhcChhhh
Confidence            999     99999999998


No 166
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00  E-value=1.2e-41  Score=341.98  Aligned_cols=257  Identities=27%  Similarity=0.406  Sum_probs=214.3

Q ss_pred             cccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEeC----
Q psy6203           4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIETS----   78 (568)
Q Consensus         4 ~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~----   78 (568)
                      .+..++|.+.+.||+|+||.||+|.+..+++.+|+|++....  .....+.+|+.+++++ +||||+++++++...    
T Consensus        18 ~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~   95 (291)
T cd06639          18 GDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS--DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLV   95 (291)
T ss_pred             CCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc--cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccC
Confidence            355788999999999999999999999999999999986532  2235677899999999 799999999998653    


Q ss_pred             -CEEEEEEeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCc
Q psy6203          79 -SHIFMVIEYCPGGELLDHIVE----RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC  153 (568)
Q Consensus        79 -~~~~lV~E~~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a  153 (568)
                       +..|+||||+++++|.+++..    ...+++..++.++.|++.||.|||+.||+||||||+||+++.++.+||+|||++
T Consensus        96 ~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~  175 (291)
T cd06639          96 GGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVS  175 (291)
T ss_pred             CCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccc
Confidence             368999999999999998853    457899999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCCccccccccCCccccccccccCcc----cCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC---C
Q psy6203         154 AKPEGGLESQLQTSCGSPNYAAPEVIKGKQ----YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY---T  226 (568)
Q Consensus       154 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~----~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~---~  226 (568)
                      ....... .......|+..|+|||++....    .++.++|||||||++|+|++|+.||...........+..+..   .
T Consensus       176 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~  254 (291)
T cd06639         176 AQLTSTR-LRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLL  254 (291)
T ss_pred             hhccccc-ccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCC
Confidence            7643321 1123346889999999986432    247899999999999999999999987765554445544422   2


Q ss_pred             CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q psy6203         227 EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       227 ~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                      .+...+..+.++|.+||+.||++||++.|+++||||+
T Consensus       255 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         255 HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             cccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            2344678899999999999999999999999999984


No 167
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=3.6e-42  Score=363.61  Aligned_cols=248  Identities=24%  Similarity=0.325  Sum_probs=204.1

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      ...|.+.+.||+|+||.||+|.+..+++.||||....       ..+.+|+.+|++++|||||++++++...+..++|||
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e  240 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLP  240 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEE
Confidence            4579999999999999999999999999999996322       235689999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc-cc
Q psy6203          87 YCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES-QL  164 (568)
Q Consensus        87 ~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~-~~  164 (568)
                      ++ .++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++........ ..
T Consensus       241 ~~-~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~  319 (461)
T PHA03211        241 KY-RSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFH  319 (461)
T ss_pred             cc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccc
Confidence            99 56888888664 56999999999999999999999999999999999999999999999999998764332111 12


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCC--------CCHHHHHHHHHcCCCC---C------
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS--------DSIDQLYDKILNGKYT---E------  227 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~--------~~~~~~~~~i~~~~~~---~------  227 (568)
                      ...+||+.|+|||++.+.. ++.++|||||||++|||++|..|+-.        ....++.+.+......   .      
T Consensus       320 ~~~~GT~~Y~APE~~~~~~-~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~  398 (461)
T PHA03211        320 YGIAGTVDTNAPEVLAGDP-YTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGS  398 (461)
T ss_pred             cccCCCcCCcCHHHHcCCC-CCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcch
Confidence            2456999999999998876 58999999999999999998765422        1123333333322110   0      


Q ss_pred             --------------------C-----CCCChHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q psy6203         228 --------------------P-----PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       228 --------------------~-----~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                                          +     ..+++++.+||.+||+.||.+|||+.|+|+||||+
T Consensus       399 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~  459 (461)
T PHA03211        399 RLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQ  459 (461)
T ss_pred             HHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccC
Confidence                                0     02456889999999999999999999999999997


No 168
>KOG4236|consensus
Probab=100.00  E-value=1.8e-43  Score=350.98  Aligned_cols=253  Identities=35%  Similarity=0.641  Sum_probs=222.6

Q ss_pred             ccccCeEE--EeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEE
Q psy6203           5 DLRNQYIL--ERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHI   81 (568)
Q Consensus         5 ~~~~~Y~i--~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~   81 (568)
                      ++..-|+|  .++||+|.||+||-|.++.+|+.||||++.+..+. .....+++|+.||+++.||.||.+...|++.+.+
T Consensus       559 d~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~erv  638 (888)
T KOG4236|consen  559 DISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERV  638 (888)
T ss_pred             hHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceE
Confidence            34455665  47899999999999999999999999999987664 3456789999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCC---CeEEEeecCccCC
Q psy6203          82 FMVIEYCPGGELLDHIV--ERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQ---NLKLIDFGLCAKP  156 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~---~~kl~DFG~a~~~  156 (568)
                      ++|||-+ .|+..+.|.  +++++++...+.++.||+.||.|||-+||+|+||||+|||+.+..   ++||||||+|+.+
T Consensus       639 FVVMEKl-~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiI  717 (888)
T KOG4236|consen  639 FVVMEKL-HGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARII  717 (888)
T ss_pred             EEEehhh-cchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeec
Confidence            9999999 556666664  468999999999999999999999999999999999999996553   6999999999987


Q ss_pred             CCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCC----CC
Q psy6203         157 EGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPW----MS  232 (568)
Q Consensus       157 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~----~~  232 (568)
                      ...  +...+.+|||.|+|||+++++. |+..-|+||.|||+|--++|.+||..+  +++-++|++..+..|+.    ++
T Consensus       718 gEk--sFRrsVVGTPAYLaPEVLrnkG-yNrSLDMWSVGVIiYVsLSGTFPFNEd--EdIndQIQNAaFMyPp~PW~eis  792 (888)
T KOG4236|consen  718 GEK--SFRRSVVGTPAYLAPEVLRNKG-YNRSLDMWSVGVIIYVSLSGTFPFNED--EDINDQIQNAAFMYPPNPWSEIS  792 (888)
T ss_pred             chh--hhhhhhcCCccccCHHHHhhcc-ccccccceeeeEEEEEEecccccCCCc--cchhHHhhccccccCCCchhhcC
Confidence            653  3446678999999999999877 588999999999999999999999755  35667888887766543    89


Q ss_pred             hHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q psy6203         233 PNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       233 ~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                      +++.|||..+|+..-.+|.|++..|.|||++
T Consensus       793 ~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq  823 (888)
T KOG4236|consen  793 PEAIDLINNLLQVKMRKRYSVDKSLSHPWLQ  823 (888)
T ss_pred             HHHHHHHHHHHHHHHHHhcchHhhccchhhh
Confidence            9999999999999999999999999999998


No 169
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex 
Probab=100.00  E-value=4.2e-42  Score=343.79  Aligned_cols=252  Identities=28%  Similarity=0.451  Sum_probs=210.3

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC-chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      +|++.+.||.|++|.||+|.+..+|+.||+|.+....... ....+.+|++++++++||||+++++++.+.+..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF   80 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence            5899999999999999999999999999999987543322 235688899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          88 CPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        88 ~~~g~L~~~i~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      +. ++|.+++..  ...+++..+..++.|++.||+|||+.|++||||+|+||+++.++.+||+|||++....... ....
T Consensus        81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~-~~~~  158 (284)
T cd07860          81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV-RTYT  158 (284)
T ss_pred             cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCc-cccc
Confidence            95 688888865  3568999999999999999999999999999999999999999999999999987543321 1223


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC-CC-------------------
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG-KY-------------------  225 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~-~~-------------------  225 (568)
                      ...+++.|+|||++.+...++.++|||||||++|+|+||+.||.+.+......++... ..                   
T Consensus       159 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07860         159 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSF  238 (284)
T ss_pred             cccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhc
Confidence            3457889999999877665688999999999999999999999876654333222110 00                   


Q ss_pred             ---------CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         226 ---------TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       226 ---------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                               ...+.+++++.++|.+||+.||.+|||+++++.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         239 PKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             ccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence                     0113467889999999999999999999999999998


No 170
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their 
Probab=100.00  E-value=3.4e-42  Score=341.24  Aligned_cols=254  Identities=26%  Similarity=0.450  Sum_probs=214.0

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC-----chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-----DLPRVKLEINALKHISHQHICKLFQVIETSSHIFM   83 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-----~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l   83 (568)
                      +|+..+.||+|++|.||+|.+..+++.||+|++.......     ....+.+|+.++++++||||+++++++.+.+..++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            5889999999999999999999999999999987543221     23567889999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCC-CeEEEeecCccCCCCCCc-
Q psy6203          84 VIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQ-NLKLIDFGLCAKPEGGLE-  161 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-~~kl~DFG~a~~~~~~~~-  161 (568)
                      ||||+++++|.+++...+++++..+..++.||+.||.|||++|++|+||+|+||+++.++ .+||+|||.+........ 
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~  160 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG  160 (268)
T ss_pred             EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence            999999999999998888899999999999999999999999999999999999998776 599999999876543211 


Q ss_pred             --cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHH---HHHHHHH--cCCCCCCCCCChH
Q psy6203         162 --SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID---QLYDKIL--NGKYTEPPWMSPN  234 (568)
Q Consensus       162 --~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~---~~~~~i~--~~~~~~~~~~~~~  234 (568)
                        .......|+..|+|||.+.+.. ++.++|+||+||++|+|++|..||......   .....+.  ......+..++++
T Consensus       161 ~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (268)
T cd06630         161 AGEFQGQLLGTIAFMAPEVLRGEQ-YGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPG  239 (268)
T ss_pred             CCccccccccccceeCHhHhccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHH
Confidence              1112346788999999987765 588999999999999999999999754432   2222221  2233445568899


Q ss_pred             HHHHHHHccccCcCCCCCHHHHhcCcccc
Q psy6203         235 SRQIVRSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       235 ~~~li~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                      +.+++.+||..+|++|||+.++++||||+
T Consensus       240 ~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         240 LRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             HHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence            99999999999999999999999999984


No 171
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00  E-value=6.5e-42  Score=338.89  Aligned_cols=252  Identities=27%  Similarity=0.414  Sum_probs=213.7

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-----CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-----EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFM   83 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l   83 (568)
                      +|++.+.||+|+||.||+|.+ .+|+.+|+|.+......     .....+.+|+.++++++|+||+++++++.+.+..++
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   79 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISI   79 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEE
Confidence            588999999999999999986 47889999998754321     123467889999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCC----
Q psy6203          84 VIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGG----  159 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~----  159 (568)
                      ||||+++++|.+++.....+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++......    
T Consensus        80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  159 (265)
T cd06631          80 FMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHG  159 (265)
T ss_pred             EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccc
Confidence            9999999999999988888999999999999999999999999999999999999999999999999988653211    


Q ss_pred             -CccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC---CCCCCCCCChHH
Q psy6203         160 -LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG---KYTEPPWMSPNS  235 (568)
Q Consensus       160 -~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~---~~~~~~~~~~~~  235 (568)
                       .........|+..|+|||.+.+.. ++.++|+|||||++|+|++|..||...+.......+...   ....+..++.++
T Consensus       160 ~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (265)
T cd06631         160 THSNMLKSMHGTPYWMAPEVINESG-YGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAA  238 (265)
T ss_pred             cccccccccCCCccccChhhhcCCC-CcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHH
Confidence             111223446899999999998765 588999999999999999999999876544433333332   123455688999


Q ss_pred             HHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         236 RQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       236 ~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                      .++|.+||+.+|.+||++.+++.||||
T Consensus       239 ~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         239 IDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             HHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            999999999999999999999999997


No 172
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00  E-value=5.2e-42  Score=342.55  Aligned_cols=249  Identities=30%  Similarity=0.473  Sum_probs=206.4

Q ss_pred             eEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCC-CCCcceeeEEEEeC--CEEEEEEe
Q psy6203          10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS-HQHICKLFQVIETS--SHIFMVIE   86 (568)
Q Consensus        10 Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~--~~~~lV~E   86 (568)
                      |++.+.||+|+||.||+|.+..+++.||+|+++............+|+.++.++. ||||+++++++.+.  +..++|||
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e   80 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE   80 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence            7889999999999999999999999999999876533323334456888899885 99999999999887  88999999


Q ss_pred             ccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          87 YCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        87 ~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      |++ ++|.+.+... ..+++..+..++.|++.||.|||+.|++||||+|+||+++. +.+||+|||++.......  ...
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~--~~~  156 (282)
T cd07831          81 LMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKP--PYT  156 (282)
T ss_pred             cCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCC--CcC
Confidence            996 5888888764 57899999999999999999999999999999999999999 999999999987654321  223


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC------------------CCCC
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG------------------KYTE  227 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~------------------~~~~  227 (568)
                      ...+++.|+|||.+.+...++.++|||||||++|+|++|..||.+.+..+....+...                  .+..
T Consensus       157 ~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (282)
T cd07831         157 EYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNF  236 (282)
T ss_pred             CCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccC
Confidence            3457899999998765555688999999999999999999999877655443333210                  1111


Q ss_pred             -----------CCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         228 -----------PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       228 -----------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                                 .+.++..+.++|.+||++||++|||+++++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         237 PSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             cccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence                       12467899999999999999999999999999997


No 173
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00  E-value=9.1e-42  Score=342.78  Aligned_cols=254  Identities=28%  Similarity=0.429  Sum_probs=206.9

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      .++|++.+.||+|+||.||+|.+..+|..||+|++...........+.+|+.+++.++|+||+++++++...+..|+|||
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e   83 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE   83 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence            46899999999999999999999999999999998765433333466789999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          87 YCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        87 ~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      |+. ++|.+.+.. ...+++..+..++.||+.||.|||+.||+|+||||+||+++.++.+||+|||++....... ....
T Consensus        84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-~~~~  161 (291)
T cd07870          84 YMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS-QTYS  161 (291)
T ss_pred             ccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC-CCCC
Confidence            995 677777654 3568889999999999999999999999999999999999999999999999987543221 1223


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHH-HHHHHHHc--CC------------------
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILN--GK------------------  224 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~-~~~~~i~~--~~------------------  224 (568)
                      ...+++.|+|||.+.+...++.++|||||||++|+|++|..||.+.+.. +....+..  +.                  
T Consensus       162 ~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (291)
T cd07870         162 SEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPE  241 (291)
T ss_pred             CccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccch
Confidence            4457899999999876555688999999999999999999999764421 22111110  00                  


Q ss_pred             -CC--CC---------CCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         225 -YT--EP---------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       225 -~~--~~---------~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                       ..  .+         ...++.+.+++.+||+.||.+|||++|++.||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         242 WFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             hccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence             00  00         0125688999999999999999999999999997


No 174
>PHA02988 hypothetical protein; Provisional
Probab=100.00  E-value=5.3e-42  Score=343.00  Aligned_cols=239  Identities=21%  Similarity=0.304  Sum_probs=206.7

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCc--hHHHHHHHHHHHhCCCCCcceeeEEEEe----CCEEEEEEec
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINALKHISHQHICKLFQVIET----SSHIFMVIEY   87 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~Ei~~l~~l~hpnIv~l~~~~~~----~~~~~lV~E~   87 (568)
                      ..||+|++|.||+|..  +|+.||+|.+........  .+.+.+|+.+|++++||||+++++++.+    ...+++||||
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey  103 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY  103 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence            5789999999999986  789999999976543221  3567799999999999999999999876    4578999999


Q ss_pred             cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc-CceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          88 CPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL-GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        88 ~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      +++|+|.+++.+.+.+++.....++.|++.||.|||+. +++||||||+||+++.++.+||+|||++......    ...
T Consensus       104 ~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~----~~~  179 (283)
T PHA02988        104 CTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSP----PFK  179 (283)
T ss_pred             CCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccc----ccc
Confidence            99999999999888899999999999999999999984 9999999999999999999999999998754322    123


Q ss_pred             ccCCccccccccccCc-ccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCCCCCChHHHHHHHHcc
Q psy6203         167 SCGSPNYAAPEVIKGK-QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--KYTEPPWMSPNSRQIVRSML  243 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~-~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~L  243 (568)
                      ..|++.|+|||++.+. ..++.++|||||||++|+|++|..||.+.+..++...+..+  .+..+...++.+++|+.+||
T Consensus       180 ~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl  259 (283)
T PHA02988        180 NVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACT  259 (283)
T ss_pred             ccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHh
Confidence            4688999999999762 34689999999999999999999999988888887777544  33444468899999999999


Q ss_pred             ccCcCCCCCHHHHhc
Q psy6203         244 QVEPGKRIKIQDLLG  258 (568)
Q Consensus       244 ~~dP~~Rps~~ell~  258 (568)
                      +.||++|||++|++.
T Consensus       260 ~~dp~~Rps~~ell~  274 (283)
T PHA02988        260 SHDSIKRPNIKEILY  274 (283)
T ss_pred             cCCcccCcCHHHHHH
Confidence            999999999999985


No 175
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00  E-value=1.2e-41  Score=337.09  Aligned_cols=254  Identities=28%  Similarity=0.488  Sum_probs=212.9

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC----CchHHHHHHHHHHHhCCCCCcceeeEEEEeC--CEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG----EDLPRVKLEINALKHISHQHICKLFQVIETS--SHI   81 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~--~~~   81 (568)
                      ++|++.+.||+|+||.||+|.+..+|..||+|.+......    .....+.+|+.++++++||||+++++++.+.  ..+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            5799999999999999999999999999999988643221    1235678899999999999999999998763  568


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC-
Q psy6203          82 FMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL-  160 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-  160 (568)
                      ++||||+++++|.+++.....+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++....... 
T Consensus        82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~  161 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL  161 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence            8999999999999999887889999999999999999999999999999999999999999999999999987543211 


Q ss_pred             -ccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CCCCCCCChHHHH
Q psy6203         161 -ESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK--YTEPPWMSPNSRQ  237 (568)
Q Consensus       161 -~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~  237 (568)
                       ........|+..|+|||++.+.. ++.++|||||||++|+|++|+.||...........+....  ...+...+..+.+
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (265)
T cd06652         162 SGTGMKSVTGTPYWMSPEVISGEG-YGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRD  240 (265)
T ss_pred             cccccccCCCCccccChhhhcCCC-CCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHH
Confidence             11223346889999999998765 5889999999999999999999998765444444443322  2234557788999


Q ss_pred             HHHHccccCcCCCCCHHHHhcCcccc
Q psy6203         238 IVRSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       238 li~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                      +|.+|+. +|++||+++|++.|||+.
T Consensus       241 ~i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         241 FLKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             HHHHHhc-ChhhCCCHHHHhcCcccC
Confidence            9999995 999999999999999984


No 176
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. 
Probab=100.00  E-value=6e-42  Score=342.61  Aligned_cols=252  Identities=27%  Similarity=0.463  Sum_probs=212.7

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEecc
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYC   88 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~   88 (568)
                      +|++.+.||.|++|.||+|++..+|+.||+|++...........+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~   80 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM   80 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence            58999999999999999999999999999999986554444556778999999999999999999999999999999999


Q ss_pred             CCCChHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          89 PGGELLDHIVER---QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        89 ~~g~L~~~i~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      ++ +|.+++...   ..+++..+..++.||+.||.|||+.|++||||||+||+++.++.++|+|||++....... ....
T Consensus        81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~-~~~~  158 (284)
T cd07836          81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV-NTFS  158 (284)
T ss_pred             Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc-cccc
Confidence            75 888888654   358999999999999999999999999999999999999999999999999987543321 1223


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC--------------------C
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK--------------------Y  225 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~--------------------~  225 (568)
                      ...+++.|+|||++.+...++.++|||||||++|+|++|+.||.+.+..+....+....                    .
T Consensus       159 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd07836         159 NEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTF  238 (284)
T ss_pred             cccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccc
Confidence            34578899999998776556889999999999999999999998776555444332210                    0


Q ss_pred             C---------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         226 T---------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       226 ~---------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                      +         ..+..++.+.++|.+||+.||.+||++.|+++||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         239 PRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             cCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            0         012357888999999999999999999999999998


No 177
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00  E-value=5.9e-42  Score=340.47  Aligned_cols=256  Identities=30%  Similarity=0.459  Sum_probs=214.7

Q ss_pred             cccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEeCC---
Q psy6203           4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIETSS---   79 (568)
Q Consensus         4 ~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~---   79 (568)
                      .+..++|++.+.||+|++|.||+|.+..+++.+|+|++.....  ....+.+|+.+++++ +||||+++++++....   
T Consensus         2 ~~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~   79 (275)
T cd06608           2 PDPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED--EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPG   79 (275)
T ss_pred             CCchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCC
Confidence            3567899999999999999999999998999999999876542  345788999999999 6999999999996544   


Q ss_pred             ---EEEEEEeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecC
Q psy6203          80 ---HIFMVIEYCPGGELLDHIVE----RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGL  152 (568)
Q Consensus        80 ---~~~lV~E~~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~  152 (568)
                         .+|+||||+++++|.+++..    +..+++..++.++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||+
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~  159 (275)
T cd06608          80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGV  159 (275)
T ss_pred             cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCcc
Confidence               58999999999999998865    35789999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCccccccccCCccccccccccCc----ccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC--
Q psy6203         153 CAKPEGGLESQLQTSCGSPNYAAPEVIKGK----QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--  226 (568)
Q Consensus       153 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~--  226 (568)
                      +...... ........|++.|+|||++...    ..++.++|||||||++|+|++|..||...........+..+...  
T Consensus       160 ~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  238 (275)
T cd06608         160 SAQLDST-LGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTL  238 (275)
T ss_pred             ceecccc-hhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCC
Confidence            8754332 1223345689999999998542    33577899999999999999999999866554444455444322  


Q ss_pred             -CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         227 -EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       227 -~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                       .+...+..+.+||.+||..||++|||+.|++.|||+
T Consensus       239 ~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         239 KSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence             122367889999999999999999999999999996


No 178
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00  E-value=9.4e-42  Score=339.07  Aligned_cols=254  Identities=28%  Similarity=0.481  Sum_probs=212.5

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--C-------chHHHHHHHHHHHhCCCCCcceeeEEEEeCC
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--E-------DLPRVKLEINALKHISHQHICKLFQVIETSS   79 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~-------~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~   79 (568)
                      +|.+.+.||+|+||.||+|.+..+|+.||+|.+......  .       ..+.+..|+.+++.++||||+++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            689999999999999999999989999999988643211  1       1245778999999999999999999999999


Q ss_pred             EEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCC
Q psy6203          80 HIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGG  159 (568)
Q Consensus        80 ~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  159 (568)
                      ..++||||+++++|.+++...+.+++..+..++.||+.||.|||++|++||||+|+||+++.++.++|+|||++......
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  161 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDI  161 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccccc
Confidence            99999999999999999988888999999999999999999999999999999999999999999999999998754322


Q ss_pred             Cc-cccccccCCccccccccccCcc-cCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCC----CCC
Q psy6203         160 LE-SQLQTSCGSPNYAAPEVIKGKQ-YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--KYTEP----PWM  231 (568)
Q Consensus       160 ~~-~~~~~~~gt~~y~aPE~l~~~~-~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~--~~~~~----~~~  231 (568)
                      .. .......|+..|+|||.+.+.. .++.++|+||||+++|++++|..||......+....+...  ....+    ..+
T Consensus       162 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (272)
T cd06629         162 YDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNL  241 (272)
T ss_pred             ccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccC
Confidence            11 1123446889999999987654 3588999999999999999999999765544333333222  11222    235


Q ss_pred             ChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         232 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       232 ~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                      +..+.++|.+||.+||++|||++++++||||
T Consensus       242 ~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         242 SPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             CHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            8899999999999999999999999999997


No 179
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00  E-value=6.2e-42  Score=341.94  Aligned_cols=247  Identities=27%  Similarity=0.412  Sum_probs=204.9

Q ss_pred             eecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCc--hHHHHHHHHHH---HhCCCCCcceeeEEEEeCCEEEEEEeccC
Q psy6203          15 TVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLEINAL---KHISHQHICKLFQVIETSSHIFMVIEYCP   89 (568)
Q Consensus        15 ~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~Ei~~l---~~l~hpnIv~l~~~~~~~~~~~lV~E~~~   89 (568)
                      .||+|+||.||++.+..+++.+|+|.+.+......  .....+|..++   ...+||||+.+++.+...+..++||||++
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN   80 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence            48999999999999999999999999876543221  22233444333   34479999999999999999999999999


Q ss_pred             CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccC
Q psy6203          90 GGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCG  169 (568)
Q Consensus        90 ~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~g  169 (568)
                      +++|.+++...+.+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......   ......|
T Consensus        81 ~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~---~~~~~~~  157 (279)
T cd05633          81 GGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHASVG  157 (279)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceecccc---CccCcCC
Confidence            9999999988888999999999999999999999999999999999999999999999999998654332   1233468


Q ss_pred             CccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCC---CHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccC
Q psy6203         170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSD---SIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVE  246 (568)
Q Consensus       170 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~d  246 (568)
                      ++.|+|||.+.+...++.++||||+||++|+|++|..||...   ....+...........++.+++++.++|.+||+.|
T Consensus       158 ~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~  237 (279)
T cd05633         158 THGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRD  237 (279)
T ss_pred             CcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCC
Confidence            999999999875444688999999999999999999999653   22333333333344556678999999999999999


Q ss_pred             cCCCC-----CHHHHhcCccccc
Q psy6203         247 PGKRI-----KIQDLLGHNWVKM  264 (568)
Q Consensus       247 P~~Rp-----s~~ell~hp~~~~  264 (568)
                      |.+|+     |++++++||||+.
T Consensus       238 p~~R~~~~~~~~~~~~~h~~~~~  260 (279)
T cd05633         238 VSKRLGCLGRGAQEVKEHVFFKG  260 (279)
T ss_pred             HHHhcCCCCCCHHHHHhCccccC
Confidence            99999     6999999999984


No 180
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00  E-value=7.7e-42  Score=342.26  Aligned_cols=256  Identities=28%  Similarity=0.432  Sum_probs=211.7

Q ss_pred             cccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEE-----e
Q psy6203           4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIE-----T   77 (568)
Q Consensus         4 ~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~-----~   77 (568)
                      .+..++|++.+.||+|+||.||+|.+..+++.+|+|++....  .....+.+|+.+++.+ +||||+++++++.     .
T Consensus        14 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~   91 (286)
T cd06638          14 PDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH--DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKN   91 (286)
T ss_pred             CCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc--chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCC
Confidence            457789999999999999999999999999999999886432  2234677899999999 6999999999873     4


Q ss_pred             CCEEEEEEeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCc
Q psy6203          78 SSHIFMVIEYCPGGELLDHIVE----RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC  153 (568)
Q Consensus        78 ~~~~~lV~E~~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a  153 (568)
                      .+..++||||++|++|.+++..    ...+++..+..++.|++.||.|||+.+|+||||||+||+++.++.+||+|||++
T Consensus        92 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~  171 (286)
T cd06638          92 GDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVS  171 (286)
T ss_pred             CCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCce
Confidence            4678999999999999988753    356889999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCCccccccccCCccccccccccCc----ccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC---C
Q psy6203         154 AKPEGGLESQLQTSCGSPNYAAPEVIKGK----QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY---T  226 (568)
Q Consensus       154 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~---~  226 (568)
                      ...... ........|++.|+|||++.+.    ..++.++||||+||++|+|++|..||...........+.....   .
T Consensus       172 ~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~  250 (286)
T cd06638         172 AQLTST-RLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLH  250 (286)
T ss_pred             eecccC-CCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCccc
Confidence            764332 1122345689999999998532    2357899999999999999999999987665443333322221   1


Q ss_pred             CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         227 EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       227 ~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                      .+...+..+.++|.+||+.||++|||+.|+++|+||
T Consensus       251 ~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         251 QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            234467889999999999999999999999999997


No 181
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00  E-value=4.9e-42  Score=342.03  Aligned_cols=255  Identities=29%  Similarity=0.517  Sum_probs=218.4

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCC---CCCcceeeEEEEeCCEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS---HQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~---hpnIv~l~~~~~~~~~~~lV   84 (568)
                      +.|++.+.||+|+||.||+|.+..+++.||+|.+...........+.+|+.+++.++   |||++++++++......|+|
T Consensus         1 ~~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv   80 (277)
T cd06917           1 SLYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII   80 (277)
T ss_pred             ChhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence            358899999999999999999999999999999876544445667888999999986   99999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          85 IEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |||+++++|.+++.. +.+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++....... ...
T Consensus        81 ~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~~~  158 (277)
T cd06917          81 MEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS-SKR  158 (277)
T ss_pred             EecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc-ccc
Confidence            999999999998865 579999999999999999999999999999999999999999999999999987654432 223


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-CCC-CCChHHHHHHHHc
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPP-WMSPNSRQIVRSM  242 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~-~~~-~~~~~~~~li~~~  242 (568)
                      ....|+..|+|||.+.+...++.++|+|||||++|+|++|..||...........+.....+ .+. ..+.++.+++.+|
T Consensus       159 ~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  238 (277)
T cd06917         159 STFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPPRLEDNGYSKLLREFVAAC  238 (277)
T ss_pred             ccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCCCCCcccCCHHHHHHHHHH
Confidence            34468999999999876555688999999999999999999999877665544443333222 222 2678999999999


Q ss_pred             cccCcCCCCCHHHHhcCccccc
Q psy6203         243 LQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       243 L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      |+.||++||++.+++.|+||+.
T Consensus       239 l~~~p~~R~~~~~il~~~~~~~  260 (277)
T cd06917         239 LDEEPKERLSAEELLKSKWIKA  260 (277)
T ss_pred             cCCCcccCcCHHHHhhChHhhc
Confidence            9999999999999999999974


No 182
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning 
Probab=100.00  E-value=6.3e-42  Score=343.04  Aligned_cols=255  Identities=29%  Similarity=0.459  Sum_probs=214.4

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      ++|++.+.||+|+||.||+|.+..+++.||+|+++..... .....+.+|++++++++|+||+++++++...+..++|||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   80 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE   80 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence            5799999999999999999999999999999998754332 234678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          87 YCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        87 ~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      |++++.+..+......+++..+..++.||+.||.|||++|++|+||+|+||+++.++.+||+|||++.............
T Consensus        81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~  160 (288)
T cd07833          81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTD  160 (288)
T ss_pred             cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccC
Confidence            99887776666666779999999999999999999999999999999999999999999999999987655433223344


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc--------------------C-CC
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN--------------------G-KY  225 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~--------------------~-~~  225 (568)
                      ..++..|+|||++.+...++.++||||||+++|+|++|.+||.+.+..+....+..                    + .+
T Consensus       161 ~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T cd07833         161 YVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAF  240 (288)
T ss_pred             cccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCcccccccc
Confidence            56889999999998774578999999999999999999999987654332222111                    0 00


Q ss_pred             -----------CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         226 -----------TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       226 -----------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                                 ..+..+++++.+||++||..+|++|||+++++.||||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         241 PEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             CCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence                       0122347889999999999999999999999999997


No 183
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00  E-value=1.8e-42  Score=348.12  Aligned_cols=262  Identities=28%  Similarity=0.479  Sum_probs=221.9

Q ss_pred             CccccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEE
Q psy6203           2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHI   81 (568)
Q Consensus         2 ~~~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~   81 (568)
                      +..+..+.|.....||+|+||.||++.+..++..||||.+.... ......+.+|+.+++.++||||+++++.+...+..
T Consensus        16 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~   94 (292)
T cd06658          16 SPGDPREYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK-QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDEL   94 (292)
T ss_pred             ccCchHHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch-HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeE
Confidence            44566778888899999999999999999999999999986533 23345678899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          82 FMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      |+||||+++++|.+++. .+.+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||++....... 
T Consensus        95 ~lv~e~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~-  172 (292)
T cd06658          95 WVVMEFLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV-  172 (292)
T ss_pred             EEEEeCCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhccccc-
Confidence            99999999999998874 4578999999999999999999999999999999999999999999999999986543221 


Q ss_pred             cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC---CCCCCCCChHHHHH
Q psy6203         162 SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK---YTEPPWMSPNSRQI  238 (568)
Q Consensus       162 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~l  238 (568)
                      .......|++.|+|||.+.+.. ++.++||||+|+++|+|++|..||...+.......+....   .......+..+.++
T Consensus       173 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  251 (292)
T cd06658         173 PKRKSLVGTPYWMAPEVISRLP-YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGF  251 (292)
T ss_pred             ccCceeecCccccCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHH
Confidence            2223456899999999987765 5889999999999999999999998877666555554332   22233478899999


Q ss_pred             HHHccccCcCCCCCHHHHhcCcccccCCC
Q psy6203         239 VRSMLQVEPGKRIKIQDLLGHNWVKMGPE  267 (568)
Q Consensus       239 i~~~L~~dP~~Rps~~ell~hp~~~~~~~  267 (568)
                      +.+||..||.+|||++|+++||||...+.
T Consensus       252 i~~~l~~~P~~Rpt~~~il~~~~~~~~~~  280 (292)
T cd06658         252 LDLMLVREPSQRATAQELLQHPFLKLAGP  280 (292)
T ss_pred             HHHHccCChhHCcCHHHHhhChhhhccCC
Confidence            99999999999999999999999996443


No 184
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00  E-value=1e-41  Score=335.69  Aligned_cols=252  Identities=28%  Similarity=0.429  Sum_probs=217.2

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC----CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG----EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      +|+..+.||+|++|+||+|.+..++..||+|.+......    +....+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            588899999999999999999889999999998754322    2345788899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          85 IEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |||+++++|.+++.....+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++.......  ..
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~--~~  158 (258)
T cd06632          81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS--FA  158 (258)
T ss_pred             EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc--cc
Confidence            9999999999999888889999999999999999999999999999999999999999999999999987654322  23


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCCCCCCCChHHHHHHHHc
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN--GKYTEPPWMSPNSRQIVRSM  242 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~li~~~  242 (568)
                      ....|++.|+|||.+.....++.++|+|||||++|+|++|..||...........+..  .....+..+++.+.+++.+|
T Consensus       159 ~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  238 (258)
T cd06632         159 KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKC  238 (258)
T ss_pred             cccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHH
Confidence            4456899999999987655358899999999999999999999977664444433333  22234556889999999999


Q ss_pred             cccCcCCCCCHHHHhcCccc
Q psy6203         243 LQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       243 L~~dP~~Rps~~ell~hp~~  262 (568)
                      |+.+|++|||+.+++.|||+
T Consensus       239 l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         239 LQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             hhcCcccCcCHHHHhcCCCC
Confidence            99999999999999999996


No 185
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00  E-value=3.3e-42  Score=343.48  Aligned_cols=256  Identities=25%  Similarity=0.406  Sum_probs=220.4

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      +...|+..+.||+|+||.||+|.+..++..||+|++...........+.+|+.++++++||||+++++.+.+.+..|+||
T Consensus         2 ~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (277)
T cd06640           2 PEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIM   81 (277)
T ss_pred             hHHhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            45678899999999999999999999999999999886544444567888999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      ||++|++|.+++.. +++++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++....... ....
T Consensus        82 e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~-~~~~  159 (277)
T cd06640          82 EYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKRN  159 (277)
T ss_pred             ecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCc-cccc
Confidence            99999999998864 578999999999999999999999999999999999999999999999999986654321 1223


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-CCCCCCChHHHHHHHHccc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY-TEPPWMSPNSRQIVRSMLQ  244 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~L~  244 (568)
                      ...++..|+|||++.+.. .+.++|+|||||++|+|++|..||...+.......+..+.. ..+...+..+.+++.+||+
T Consensus       160 ~~~~~~~y~apE~~~~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  238 (277)
T cd06640         160 TFVGTPFWMAPEVIQQSA-YDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLTGEFSKPFKEFIDACLN  238 (277)
T ss_pred             cccCcccccCHhHhccCC-CccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCchhhhHHHHHHHHHHcc
Confidence            346788999999998765 58899999999999999999999987776655555444322 2334567889999999999


Q ss_pred             cCcCCCCCHHHHhcCccccc
Q psy6203         245 VEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       245 ~dP~~Rps~~ell~hp~~~~  264 (568)
                      .+|++||++++++.||||..
T Consensus       239 ~~p~~Rp~~~~il~~~~~~~  258 (277)
T cd06640         239 KDPSFRPTAKELLKHKFIVK  258 (277)
T ss_pred             cCcccCcCHHHHHhChHhhh
Confidence            99999999999999999974


No 186
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=3.5e-42  Score=355.84  Aligned_cols=245  Identities=22%  Similarity=0.353  Sum_probs=199.0

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      ..|++.+.||+|+||.||+|.+..+++.||+|+....       ....|+.++++++||||+++++++...+..++|||+
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~  138 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPH  138 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEc
Confidence            4699999999999999999999999999999985432       234689999999999999999999999999999999


Q ss_pred             cCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          88 CPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        88 ~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      +. ++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......  .....
T Consensus       139 ~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--~~~~~  215 (357)
T PHA03209        139 YS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA--PAFLG  215 (357)
T ss_pred             cC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC--ccccc
Confidence            94 688888765 467999999999999999999999999999999999999999999999999998753322  12234


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCC-CCCCCCH----------HHHHHHHHc-C----CCC----
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFL-PFDSDSI----------DQLYDKILN-G----KYT----  226 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~-pf~~~~~----------~~~~~~i~~-~----~~~----  226 (568)
                      ..||+.|+|||++.+.. ++.++|||||||++|+|+++.. +|.....          ..+...+.. +    .++    
T Consensus       216 ~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  294 (357)
T PHA03209        216 LAGTVETNAPEVLARDK-YNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPG  294 (357)
T ss_pred             ccccccccCCeecCCCC-CCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCc
Confidence            56899999999998766 5899999999999999998544 4432110          111111110 0    000    


Q ss_pred             ------------------------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q psy6203         227 ------------------------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       227 ------------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                                              ....++.++.+||.+||+.||.+|||+.|+|+||||+
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~  355 (357)
T PHA03209        295 SRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFA  355 (357)
T ss_pred             cHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhc
Confidence                                    0012466778899999999999999999999999997


No 187
>KOG2345|consensus
Probab=100.00  E-value=1.5e-43  Score=322.69  Aligned_cols=253  Identities=29%  Similarity=0.444  Sum_probs=207.4

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEE-----eCCE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIE-----TSSH   80 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~-----~~~~   80 (568)
                      -.++|+|.+.||+|||+.|+++++..++..||+|.+.... .++.+...+|++..++++||||++++++..     ....
T Consensus        19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~   97 (302)
T KOG2345|consen   19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE   97 (302)
T ss_pred             cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence            3579999999999999999999999999999999988665 456778899999999999999999988753     2345


Q ss_pred             EEEEEeccCCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHcC--ceecCCCCCceEEcCCCCeEEEeecCcc
Q psy6203          81 IFMVIEYCPGGELLDHIVER----QRLGEKESRAFFRQILSAVAYLHHLG--YAHRDLKPENVLLDRNQNLKLIDFGLCA  154 (568)
Q Consensus        81 ~~lV~E~~~~g~L~~~i~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~  154 (568)
                      .||+++|...|+|.+.|...    ..++|.++..|+.+|++||++||+..  +.||||||.|||+.+.+.++|.|||.++
T Consensus        98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~  177 (302)
T KOG2345|consen   98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSAT  177 (302)
T ss_pred             EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCcc
Confidence            89999999999999999753    36999999999999999999999998  9999999999999999999999999987


Q ss_pred             CCCCCCccc--------cccccCCccccccccccCc--ccCCcccceechhhHHHHHHhCCCCCCCCC--HHHHHHHHHc
Q psy6203         155 KPEGGLESQ--------LQTSCGSPNYAAPEVIKGK--QYYGSETDVWSMGVMLYALLCGFLPFDSDS--IDQLYDKILN  222 (568)
Q Consensus       155 ~~~~~~~~~--------~~~~~gt~~y~aPE~l~~~--~~~~~~~DiwSlG~il~~lltG~~pf~~~~--~~~~~~~i~~  222 (568)
                      .........        ......|..|.|||.+.-.  ...+.++|||||||++|.|+.|..||+..-  -..+.-.+.+
T Consensus       178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n  257 (302)
T KOG2345|consen  178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQN  257 (302)
T ss_pred             ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeec
Confidence            644321111        1112358899999998532  235789999999999999999999995211  0111223444


Q ss_pred             CCCCCC--CCCChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         223 GKYTEP--PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       223 ~~~~~~--~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      +.+.+|  ..+|..+.++|++||+.||.+||++.+++.+
T Consensus       258 ~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  258 AQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             cccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            444443  3489999999999999999999999999875


No 188
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00  E-value=2.4e-42  Score=358.93  Aligned_cols=250  Identities=24%  Similarity=0.440  Sum_probs=206.1

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCC-----cEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTG-----EKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIETSSHI   81 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~   81 (568)
                      ++|++.+.||+|+||.||+|.+..+|     ..||+|+++..........+.+|+.+++.+ +||||+++++++...+..
T Consensus        38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~  117 (374)
T cd05106          38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV  117 (374)
T ss_pred             HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence            57999999999999999999865444     579999997654434456688899999999 899999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhc-------------------------------------------------------------
Q psy6203          82 FMVIEYCPGGELLDHIVER-------------------------------------------------------------  100 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~-------------------------------------------------------------  100 (568)
                      ++|||||++|+|.+++...                                                             
T Consensus       118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  197 (374)
T cd05106         118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS  197 (374)
T ss_pred             EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence            9999999999999998642                                                             


Q ss_pred             ---------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc-cccccCC
Q psy6203         101 ---------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ-LQTSCGS  170 (568)
Q Consensus       101 ---------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~-~~~~~gt  170 (568)
                               .++++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......... .....++
T Consensus       198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~  277 (374)
T cd05106         198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLP  277 (374)
T ss_pred             cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCc
Confidence                     246788899999999999999999999999999999999999999999999987643321111 1122356


Q ss_pred             ccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcC--CCCCCCCCChHHHHHHHHccccCc
Q psy6203         171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG--KYTEPPWMSPNSRQIVRSMLQVEP  247 (568)
Q Consensus       171 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~L~~dP  247 (568)
                      +.|+|||++.+.. ++.++|||||||++|+|++ |..||...........+...  ....+...++++.+++.+||+.||
T Consensus       278 ~~y~aPE~~~~~~-~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp  356 (374)
T cd05106         278 VKWMAPESIFDCV-YTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEP  356 (374)
T ss_pred             cceeCHHHhcCCC-CCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCCh
Confidence            6899999997765 6899999999999999997 99999776544333333332  233455678999999999999999


Q ss_pred             CCCCCHHHHhc
Q psy6203         248 GKRIKIQDLLG  258 (568)
Q Consensus       248 ~~Rps~~ell~  258 (568)
                      .+|||+.++++
T Consensus       357 ~~RPs~~~l~~  367 (374)
T cd05106         357 TERPTFSQISQ  367 (374)
T ss_pred             hhCcCHHHHHH
Confidence            99999999875


No 189
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00  E-value=3e-42  Score=358.44  Aligned_cols=252  Identities=26%  Similarity=0.433  Sum_probs=207.3

Q ss_pred             ccCeEEEeeecccCCeEEEEEEE-----cCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATH-----VLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIETSSH   80 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~   80 (568)
                      .++|++.++||+|+||+||+|.+     ..++..||+|+++........+.+.+|+.+++.+ +||||+++++++...+.
T Consensus        34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~  113 (375)
T cd05104          34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP  113 (375)
T ss_pred             hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence            45799999999999999999974     3456789999997554334456788899999999 89999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcC-----------------------------------------------------------
Q psy6203          81 IFMVIEYCPGGELLDHIVERQ-----------------------------------------------------------  101 (568)
Q Consensus        81 ~~lV~E~~~~g~L~~~i~~~~-----------------------------------------------------------  101 (568)
                      .++|||||++|+|.+++....                                                           
T Consensus       114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (375)
T cd05104         114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS  193 (375)
T ss_pred             ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence            999999999999999986432                                                           


Q ss_pred             ----------------CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc-c
Q psy6203         102 ----------------RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ-L  164 (568)
Q Consensus       102 ----------------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~-~  164 (568)
                                      .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......... .
T Consensus       194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~  273 (375)
T cd05104         194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVK  273 (375)
T ss_pred             ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccccccc
Confidence                            46788899999999999999999999999999999999999999999999987654321111 1


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHH-HHHHHHHcCCC-CCCCCCChHHHHHHHH
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSID-QLYDKILNGKY-TEPPWMSPNSRQIVRS  241 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~-~~~~~i~~~~~-~~~~~~~~~~~~li~~  241 (568)
                      ....++..|+|||++.+.. ++.++|||||||++|+|++ |..||...... ...+.+..+.. ..+...+.++.+|+.+
T Consensus       274 ~~~~~~~~y~aPE~~~~~~-~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  352 (375)
T cd05104         274 GNARLPVKWMAPESIFNCV-YTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKS  352 (375)
T ss_pred             CCCCCCcceeChhHhcCCC-CCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHH
Confidence            1233566799999998766 5899999999999999998 89999776543 34444444432 3345578899999999


Q ss_pred             ccccCcCCCCCHHHHhcC
Q psy6203         242 MLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       242 ~L~~dP~~Rps~~ell~h  259 (568)
                      ||+.||++|||+.|+++.
T Consensus       353 cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         353 CWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             HccCChhHCcCHHHHHHH
Confidence            999999999999999864


No 190
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00  E-value=6.3e-42  Score=346.22  Aligned_cols=250  Identities=22%  Similarity=0.334  Sum_probs=204.5

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcC----------------CCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcce
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVL----------------TGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICK   70 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~----------------~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~   70 (568)
                      .++|++.++||+|+||.||+|.+..                ++..||+|++...........+.+|+.++.+++||||++
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~   83 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR   83 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence            4789999999999999999998532                344799999876433333456888999999999999999


Q ss_pred             eeEEEEeCCEEEEEEeccCCCChHHHHHhcC-------------------CCCHHHHHHHHHHHHHHHHHHHHcCceecC
Q psy6203          71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQ-------------------RLGEKESRAFFRQILSAVAYLHHLGYAHRD  131 (568)
Q Consensus        71 l~~~~~~~~~~~lV~E~~~~g~L~~~i~~~~-------------------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrD  131 (568)
                      +++++.+.+..++||||+++|+|.+++....                   .+++..+..++.||+.||.|||+.||+|||
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~d  163 (304)
T cd05096          84 LLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRD  163 (304)
T ss_pred             EEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccC
Confidence            9999999999999999999999999986532                   357788899999999999999999999999


Q ss_pred             CCCCceEEcCCCCeEEEeecCccCCCCCCc-cccccccCCccccccccccCcccCCcccceechhhHHHHHHh--CCCCC
Q psy6203         132 LKPENVLLDRNQNLKLIDFGLCAKPEGGLE-SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC--GFLPF  208 (568)
Q Consensus       132 lkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt--G~~pf  208 (568)
                      |||+|||++.++.+||+|||++........ .......++..|+|||++.+.. ++.++|||||||++|+|++  |..||
T Consensus       164 lkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~~~~~~p~  242 (304)
T cd05096         164 LATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGK-FTTASDVWAFGVTLWEILMLCKEQPY  242 (304)
T ss_pred             cchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCC-CCchhhhHHHHHHHHHHHHccCCCCC
Confidence            999999999999999999999875433211 1122334678899999987766 6899999999999999986  66888


Q ss_pred             CCCCHHHHHHHHHc----C----CCCCCCCCChHHHHHHHHccccCcCCCCCHHHHh
Q psy6203         209 DSDSIDQLYDKILN----G----KYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLL  257 (568)
Q Consensus       209 ~~~~~~~~~~~i~~----~----~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell  257 (568)
                      ...+..+....+..    .    ....++..++.+.+|+.+||+.||.+|||++||.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~  299 (304)
T cd05096         243 GELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH  299 (304)
T ss_pred             CcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence            87666555444321    1    1223456788999999999999999999999994


No 191
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00  E-value=1.1e-41  Score=339.92  Aligned_cols=247  Identities=26%  Similarity=0.414  Sum_probs=208.5

Q ss_pred             eecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCc--hHHHHHH---HHHHHhCCCCCcceeeEEEEeCCEEEEEEeccC
Q psy6203          15 TVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LPRVKLE---INALKHISHQHICKLFQVIETSSHIFMVIEYCP   89 (568)
Q Consensus        15 ~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~~E---i~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~   89 (568)
                      .||+|+||.||+|.+..+++.||+|++.+......  ......|   +..++...||||+++++.+...+..|+||||+.
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            48999999999999999999999999876543211  1122333   334555689999999999999999999999999


Q ss_pred             CCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccC
Q psy6203          90 GGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCG  169 (568)
Q Consensus        90 ~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~g  169 (568)
                      |++|.+++...+.+++..++.++.|++.||.|||+.+|+||||||+||+++.++.+||+|||++......   .....+|
T Consensus        81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~---~~~~~~~  157 (278)
T cd05606          81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---KPHASVG  157 (278)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCcc---CCcCcCC
Confidence            9999999988888999999999999999999999999999999999999999999999999998754332   2234578


Q ss_pred             CccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCC---CHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccC
Q psy6203         170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSD---SIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVE  246 (568)
Q Consensus       170 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~---~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~d  246 (568)
                      +..|+|||++.+...++.++||||+||++|+|++|..||...   ........+.......+...++.+.+++.+||..+
T Consensus       158 ~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~  237 (278)
T cd05606         158 THGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRD  237 (278)
T ss_pred             CcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcC
Confidence            999999999976544688999999999999999999999765   34444444444555666668999999999999999


Q ss_pred             cCCCC-----CHHHHhcCccccc
Q psy6203         247 PGKRI-----KIQDLLGHNWVKM  264 (568)
Q Consensus       247 P~~Rp-----s~~ell~hp~~~~  264 (568)
                      |.+||     ++.++++||||+.
T Consensus       238 p~~R~~~~~~~~~~ll~~~~~~~  260 (278)
T cd05606         238 VNRRLGCLGRGAQEVKEHPFFRS  260 (278)
T ss_pred             HHhccCCCCCCHHHHHhCccccC
Confidence            99999     9999999999984


No 192
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with 
Probab=100.00  E-value=2e-41  Score=333.35  Aligned_cols=251  Identities=31%  Similarity=0.535  Sum_probs=219.0

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      +|++.+.||+|+||.||+|.+..+++.+|+|.+...... .....+.+|+.++++++||||+++++.+...+..++||||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY   80 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence            699999999999999999999999999999998765433 2356788899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCC-CeEEEeecCccCCCCCCcccc
Q psy6203          88 CPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQ-NLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        88 ~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      +++++|.+++...  ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++ .+||+|||++......  ...
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~--~~~  158 (256)
T cd08220          81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK--SKA  158 (256)
T ss_pred             CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCC--ccc
Confidence            9999999999764  3589999999999999999999999999999999999998654 5899999998765432  122


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-CCCCCCChHHHHHHHHcc
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY-TEPPWMSPNSRQIVRSML  243 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~L  243 (568)
                      ....|+..|+|||.+.+.. ++.++||||+|+++|+|++|..||...+.......+..+.. +.+..+++++.+++.+||
T Consensus       159 ~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l  237 (256)
T cd08220         159 YTVVGTPCYISPELCEGKP-YNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFAPISDRYSPDLRQLILSML  237 (256)
T ss_pred             cccccCCcccCchhccCCC-CCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCCCCCCCcCHHHHHHHHHHc
Confidence            3356889999999998765 58899999999999999999999988887777766665543 345568999999999999


Q ss_pred             ccCcCCCCCHHHHhcCccc
Q psy6203         244 QVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       244 ~~dP~~Rps~~ell~hp~~  262 (568)
                      +.||++|||+.|++.||||
T Consensus       238 ~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         238 NLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             cCChhhCCCHHHHhhCCCC
Confidence            9999999999999999996


No 193
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00  E-value=2.6e-42  Score=341.55  Aligned_cols=252  Identities=27%  Similarity=0.462  Sum_probs=217.5

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      ++|++.+.||+|++|.||+|.++.+++.+|+|.+...........+.+|++++++++||||+++++.+...+..++||||
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~   80 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY   80 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence            47889999999999999999999999999999988765444456788899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH-cCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          88 CPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHH-LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        88 ~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      +++++|.+++... ..+++..+..++.|++.||.|||+ .|++|+||||+||+++.++.++|+|||.+.......   ..
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~---~~  157 (265)
T cd06605          81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL---AK  157 (265)
T ss_pred             cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH---hh
Confidence            9999999999876 789999999999999999999999 999999999999999999999999999986543221   11


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCCC-CCCC-CChHHHHH
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSD-----SIDQLYDKILNGKYT-EPPW-MSPNSRQI  238 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~-----~~~~~~~~i~~~~~~-~~~~-~~~~~~~l  238 (568)
                      ...++..|+|||.+.+.. ++.++||||||+++|+|++|..||...     ...+..+.+..+..+ .+.. +++++.++
T Consensus       158 ~~~~~~~y~~PE~~~~~~-~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  236 (265)
T cd06605         158 TFVGTSSYMAPERIQGND-YSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDF  236 (265)
T ss_pred             cccCChhccCHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHH
Confidence            256889999999998765 689999999999999999999999654     333444444444332 2233 78899999


Q ss_pred             HHHccccCcCCCCCHHHHhcCcccc
Q psy6203         239 VRSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       239 i~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                      |.+||..||++|||+.+++.||||+
T Consensus       237 i~~~l~~~p~~Rpt~~~ll~~~~~~  261 (265)
T cd06605         237 VNLCLIKDPRERPSYKELLEHPFIK  261 (265)
T ss_pred             HHHHcCCCchhCcCHHHHhhCchhh
Confidence            9999999999999999999999997


No 194
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00  E-value=4.2e-42  Score=343.65  Aligned_cols=251  Identities=22%  Similarity=0.340  Sum_probs=215.3

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCC-----cEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTG-----EKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIF   82 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   82 (568)
                      ++|++.+.||+|+||.||+|.+...+     ..||+|.+...........+.+|+.++++++||||+++++++...+..+
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   84 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC   84 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence            57899999999999999999976555     6799999875443333456888999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeE
Q psy6203          83 MVIEYCPGGELLDHIVER----------------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLK  146 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~----------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~k  146 (568)
                      ++|||+++++|.+++...                ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++
T Consensus        85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~  164 (283)
T cd05048          85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVK  164 (283)
T ss_pred             EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEE
Confidence            999999999999999764                4578899999999999999999999999999999999999999999


Q ss_pred             EEeecCccCCCCCCc-cccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC
Q psy6203         147 LIDFGLCAKPEGGLE-SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK  224 (568)
Q Consensus       147 l~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~  224 (568)
                      |+|||++........ .......+++.|+|||.+.+.. ++.++|||||||++|+|++ |..||.+.+..++...+..+.
T Consensus       165 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~  243 (283)
T cd05048         165 ISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGK-FTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQ  243 (283)
T ss_pred             ECCCcceeeccccccccccCCCcccccccCHHHhccCc-CchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence            999999875432211 1223345688999999987766 5899999999999999998 999999888888888887665


Q ss_pred             C-CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         225 Y-TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       225 ~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      . ..+..+++++.+|+.+||+.||.+||++.|++++
T Consensus       244 ~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         244 LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            4 3455689999999999999999999999999874


No 195
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a 
Probab=100.00  E-value=6.5e-42  Score=336.74  Aligned_cols=251  Identities=29%  Similarity=0.464  Sum_probs=216.6

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      .++|++.+.||+|+||.||+|.+..++..+|+|.+.....   ...+.+|+.++++++||||+++++.+.+....|+++|
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e   78 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED---LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME   78 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH---HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence            4789999999999999999999998899999999875432   5678899999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          87 YCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        87 ~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      |+++++|.+++.. ...+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++....... ....
T Consensus        79 ~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~-~~~~  157 (256)
T cd06612          79 YCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTM-AKRN  157 (256)
T ss_pred             cCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCc-cccc
Confidence            9999999999875 4578999999999999999999999999999999999999999999999999987654321 1223


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC---CCCCCCCChHHHHHHHHc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK---YTEPPWMSPNSRQIVRSM  242 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~---~~~~~~~~~~~~~li~~~  242 (568)
                      ...++..|+|||++.+.. ++.++||||||+++|+|++|+.||...+.......+....   ...+..++..+.++|.+|
T Consensus       158 ~~~~~~~y~~PE~~~~~~-~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  236 (256)
T cd06612         158 TVIGTPFWMAPEVIQEIG-YNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKC  236 (256)
T ss_pred             cccCCccccCHHHHhcCC-CCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHH
Confidence            345788999999998765 5889999999999999999999998766554443333222   223345678999999999


Q ss_pred             cccCcCCCCCHHHHhcCccc
Q psy6203         243 LQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       243 L~~dP~~Rps~~ell~hp~~  262 (568)
                      |+.||++|||+.|++.||||
T Consensus       237 l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         237 LVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             HhcChhhCcCHHHHhcCCCC
Confidence            99999999999999999997


No 196
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00  E-value=5.3e-42  Score=348.75  Aligned_cols=246  Identities=24%  Similarity=0.386  Sum_probs=193.2

Q ss_pred             EeeecccCCeEEEEEEEcC--CCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEE--eCCEEEEEEecc
Q psy6203          13 ERTVGSGGFAKVKLATHVL--TGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIE--TSSHIFMVIEYC   88 (568)
Q Consensus        13 ~~~lG~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~--~~~~~~lV~E~~   88 (568)
                      +.+||+|+||+||+|++..  ++..||+|.+....   ....+.+|+.+++.++||||+++++++.  .....++||||+
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~   82 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG---ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA   82 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC---CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee
Confidence            4689999999999999654  56889999886543   2235778999999999999999999884  456789999999


Q ss_pred             CCCChHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEE----cCCCCeEEEeecCccC
Q psy6203          89 PGGELLDHIVER---------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLL----DRNQNLKLIDFGLCAK  155 (568)
Q Consensus        89 ~~g~L~~~i~~~---------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll----~~~~~~kl~DFG~a~~  155 (568)
                      + ++|.+.+...         ..+++..++.++.||+.||.|||+.||+||||||+|||+    +.++.+||+|||+++.
T Consensus        83 ~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~  161 (317)
T cd07867          83 E-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARL  161 (317)
T ss_pred             C-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence            5 5788777521         248899999999999999999999999999999999999    4567899999999976


Q ss_pred             CCCCCc--cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHH---------HHHHHHHc--
Q psy6203         156 PEGGLE--SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID---------QLYDKILN--  222 (568)
Q Consensus       156 ~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~---------~~~~~i~~--  222 (568)
                      ......  .......||+.|+|||++.+...++.++|||||||++|+|+||.+||......         .....+..  
T Consensus       162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  241 (317)
T cd07867         162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVM  241 (317)
T ss_pred             cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhc
Confidence            543221  12234568999999999987665789999999999999999999999643211         00000000  


Q ss_pred             --------------------------CCCC----------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         223 --------------------------GKYT----------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       223 --------------------------~~~~----------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                                                ....          .....+..+.+||.+||+.||.+|||++|+|+||||
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         242 GFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             CCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence                                      0000          011234568899999999999999999999999998


No 197
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00  E-value=1.1e-41  Score=350.24  Aligned_cols=257  Identities=25%  Similarity=0.425  Sum_probs=209.4

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeC------
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETS------   78 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~------   78 (568)
                      ++.++|.+.+.||.|+||.||+|.+..+|+.||+|.+..... .....+.+|+.++++++||||+++++++...      
T Consensus         2 ~~~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (342)
T cd07854           2 DLGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE   80 (342)
T ss_pred             CcCcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC-chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence            578999999999999999999999999999999999876543 3456688899999999999999999876543      


Q ss_pred             --------CEEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcC-CCCeEEEe
Q psy6203          79 --------SHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-NQNLKLID  149 (568)
Q Consensus        79 --------~~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~-~~~~kl~D  149 (568)
                              ...|+||||++ ++|.+++. ...+++..++.++.||+.||.|||+.||+||||||+||+++. ++.+||+|
T Consensus        81 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~d  158 (342)
T cd07854          81 DVGSLTELNSVYIVQEYME-TDLANVLE-QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGD  158 (342)
T ss_pred             ccccccccceEEEEeeccc-ccHHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECC
Confidence                    35799999996 58888775 457999999999999999999999999999999999999974 55789999


Q ss_pred             ecCccCCCCCCc--cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC---
Q psy6203         150 FGLCAKPEGGLE--SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK---  224 (568)
Q Consensus       150 FG~a~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~---  224 (568)
                      ||++........  .......++..|+|||.+.+...++.++|||||||++|+|++|..||.+.+.......+....   
T Consensus       159 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~  238 (342)
T cd07854         159 FGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVV  238 (342)
T ss_pred             cccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence            999865432111  111233578899999988665557889999999999999999999998765444333322110   


Q ss_pred             ---------------------CC------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         225 ---------------------YT------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       225 ---------------------~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                                           ..      ..+.++.++.+||.+||+.||.+|||++|++.||||+.
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~  305 (342)
T cd07854         239 REEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSC  305 (342)
T ss_pred             ChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccc
Confidence                                 00      11346788999999999999999999999999999984


No 198
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00  E-value=2.4e-41  Score=334.28  Aligned_cols=254  Identities=31%  Similarity=0.541  Sum_probs=215.8

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      +|++.+.||+|+||.||+|.+..+++.||+|.++..... .....+..|+.+++.++|+||+++++++.+.+..++|+||
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY   80 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence            699999999999999999999889999999999866543 2456788999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc---c
Q psy6203          88 CPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ---L  164 (568)
Q Consensus        88 ~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~---~  164 (568)
                      +++++|.+++.....+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.+||+|||++..........   .
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~  160 (264)
T cd06626          81 CSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEV  160 (264)
T ss_pred             CCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccc
Confidence            9999999999887789999999999999999999999999999999999999999999999999987654322211   1


Q ss_pred             ccccCCccccccccccCcc--cCCcccceechhhHHHHHHhCCCCCCCCC-HHHHHHHHHcC-CCCCCCC--CChHHHHH
Q psy6203         165 QTSCGSPNYAAPEVIKGKQ--YYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKILNG-KYTEPPW--MSPNSRQI  238 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~--~~~~~~DiwSlG~il~~lltG~~pf~~~~-~~~~~~~i~~~-~~~~~~~--~~~~~~~l  238 (568)
                      ....+++.|+|||++.+..  ..+.++||||||+++|+|++|..||.... .......+..+ ....+..  +++.+.++
T Consensus       161 ~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  240 (264)
T cd06626         161 QSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDF  240 (264)
T ss_pred             cCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHH
Confidence            2356788999999987654  25789999999999999999999997653 33333333333 2233333  48899999


Q ss_pred             HHHccccCcCCCCCHHHHhcCccc
Q psy6203         239 VRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       239 i~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                      |.+||+.+|++|||+.|++.|||+
T Consensus       241 i~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         241 LDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             HHHHccCCcccCCCHHHHhcCCCC
Confidence            999999999999999999999996


No 199
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00  E-value=1.8e-41  Score=341.16  Aligned_cols=254  Identities=29%  Similarity=0.424  Sum_probs=208.3

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC-chHHHHHHHHHHHhCC-CCCcceeeEEEEeCCE-----
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHIS-HQHICKLFQVIETSSH-----   80 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~-----   80 (568)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|.+....... ....+.+|+.+++.+. ||||+++++++...+.     
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~   80 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS   80 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence            57999999999999999999999999999999987543322 2356788999999995 6999999999877665     


Q ss_pred             EEEEEeccCCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcC-CCCeEEEeecCcc
Q psy6203          81 IFMVIEYCPGGELLDHIVER-----QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-NQNLKLIDFGLCA  154 (568)
Q Consensus        81 ~~lV~E~~~~g~L~~~i~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~-~~~~kl~DFG~a~  154 (568)
                      .|+||||+++ +|.+++...     ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.+||+|||++.
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~  159 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGR  159 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccce
Confidence            8999999975 788888643     35799999999999999999999999999999999999998 8899999999987


Q ss_pred             CCCCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC----------
Q psy6203         155 KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK----------  224 (568)
Q Consensus       155 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~----------  224 (568)
                      ...... .......+++.|+|||++.+...++.++||||||+++|+|++|..||.+.+.......+....          
T Consensus       160 ~~~~~~-~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (295)
T cd07837         160 AFSIPV-KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPG  238 (295)
T ss_pred             ecCCCc-cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcc
Confidence            543321 112233578899999998765556899999999999999999999998766544333322110          


Q ss_pred             ---------CC---------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q psy6203         225 ---------YT---------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       225 ---------~~---------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                               +.         ..+.+++.+.+||.+||+.||.+|||++|++.||||+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         239 VSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             hhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence                     00         0134688899999999999999999999999999985


No 200
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00  E-value=1.6e-41  Score=343.86  Aligned_cols=259  Identities=24%  Similarity=0.418  Sum_probs=208.9

Q ss_pred             ccccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC-chHHHHHHHHHHHhCCCCCcceeeEEEEeCC--
Q psy6203           3 YIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQVIETSS--   79 (568)
Q Consensus         3 ~~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~--   79 (568)
                      +.+.-++|++.+.||+|+||.||+|.+..+++.||+|.+......+ ....+.+|+.++++++||||+++++++...+  
T Consensus         7 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   86 (310)
T cd07865           7 FCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATP   86 (310)
T ss_pred             ccchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccc
Confidence            4456678999999999999999999999999999999987543322 2334567999999999999999999986543  


Q ss_pred             ------EEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecC
Q psy6203          80 ------HIFMVIEYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGL  152 (568)
Q Consensus        80 ------~~~lV~E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~  152 (568)
                            ..++||||+. ++|.+.+... ..+++.+++.++.||+.||+|||++|++|+||||+||+++.++.+||+|||+
T Consensus        87 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~  165 (310)
T cd07865          87 YNRYKGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGL  165 (310)
T ss_pred             ccCCCceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCC
Confidence                  4599999995 5788877654 3789999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCc---cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCC-
Q psy6203         153 CAKPEGGLE---SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN--GKYT-  226 (568)
Q Consensus       153 a~~~~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~--~~~~-  226 (568)
                      +........   .......++..|+|||.+.+...++.++||||||+++|+|++|..||.+.+.......+..  +..+ 
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (310)
T cd07865         166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITP  245 (310)
T ss_pred             cccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence            875433211   1122345788999999987765568899999999999999999999987765443322221  1000 


Q ss_pred             ----------------C-------------CCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         227 ----------------E-------------PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       227 ----------------~-------------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                                      .             +...++.+.+||.+||..||.+|||++|+++||||
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         246 EVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             hhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence                            0             01135678899999999999999999999999998


No 201
>KOG1989|consensus
Probab=100.00  E-value=1e-42  Score=369.49  Aligned_cols=246  Identities=37%  Similarity=0.579  Sum_probs=208.7

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCC-CCCcceeeEE-EEe---C---C
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS-HQHICKLFQV-IET---S---S   79 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~-~~~---~---~   79 (568)
                      .+++|.+.|.+|||+.||+|++...|..||+|++-.. .......+.+||.+|++|+ |+|||.+++. ...   .   -
T Consensus        37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~  115 (738)
T KOG1989|consen   37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW  115 (738)
T ss_pred             EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence            4688999999999999999999988899999988755 3456778999999999997 9999999993 211   1   2


Q ss_pred             EEEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcC--ceecCCCCCceEEcCCCCeEEEeecCccC
Q psy6203          80 HIFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLG--YAHRDLKPENVLLDRNQNLKLIDFGLCAK  155 (568)
Q Consensus        80 ~~~lV~E~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~kl~DFG~a~~  155 (568)
                      .++|.||||.||.|.+++.++  ..|+|.++++|+.|+++|+.+||...  |||||||-|||||+.+|+.||||||.+..
T Consensus       116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt  195 (738)
T KOG1989|consen  116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATT  195 (738)
T ss_pred             EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCccccccc
Confidence            578999999999999999854  56999999999999999999999987  99999999999999999999999999875


Q ss_pred             CCCCCcccc--------ccccCCcccccccccc---CcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC
Q psy6203         156 PEGGLESQL--------QTSCGSPNYAAPEVIK---GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK  224 (568)
Q Consensus       156 ~~~~~~~~~--------~~~~gt~~y~aPE~l~---~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~  224 (568)
                      .........        -....|+.|+|||++.   +.+ .+.|+|||+|||+||-|+....||.....    -.|+++.
T Consensus       196 ~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~p-I~eKsDIWALGclLYkLCy~t~PFe~sg~----laIlng~  270 (738)
T KOG1989|consen  196 KILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLP-IGEKSDIWALGCLLYKLCYFTTPFEESGK----LAILNGN  270 (738)
T ss_pred             ccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCC-CcchhHHHHHHHHHHHHHHhCCCcCcCcc----eeEEecc
Confidence            433221100        0124699999999973   444 58999999999999999999999987632    2578898


Q ss_pred             CCCCC--CCChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         225 YTEPP--WMSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       225 ~~~~~--~~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      |.+|+  .++..+++||+.||+.||++||++-|++.+
T Consensus       271 Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  271 YSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEE  307 (738)
T ss_pred             ccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence            88776  589999999999999999999999998864


No 202
>KOG0696|consensus
Probab=100.00  E-value=3.8e-43  Score=339.87  Aligned_cols=256  Identities=32%  Similarity=0.564  Sum_probs=230.8

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHI-SHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      .+|.++.+||+|+||+|.+|..+.|.+.||||++++.-+-  ++.+-...|-++|... +-|.+++++..|++-+.+|+|
T Consensus       349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV  428 (683)
T KOG0696|consen  349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV  428 (683)
T ss_pred             cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence            4688999999999999999999999999999999876542  2333344566677665 468999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          85 IEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |||+.||+|--+|.+-+++.|..+..++..|+-||-+||++||+.||||.+|||++.+|++||+|||+++...-+ ....
T Consensus       429 MEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~-~~TT  507 (683)
T KOG0696|consen  429 MEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD-GVTT  507 (683)
T ss_pred             EEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccC-Ccce
Confidence            999999999999999999999999999999999999999999999999999999999999999999998864332 3456


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccc
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQ  244 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~  244 (568)
                      .+.||||.|+|||++.-.+ |+.++|.||+||+||||+.|++||++.+.+++++.|.......|..+|.++.++++.+|.
T Consensus       508 kTFCGTPdYiAPEIi~YqP-YgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslSkEAv~ickg~lt  586 (683)
T KOG0696|consen  508 KTFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLSKEAVAICKGLLT  586 (683)
T ss_pred             eeecCCCcccccceEEecc-cccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccccHHHHHHHHHHhh
Confidence            7899999999999998776 699999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCcCCCCCH-----HHHhcCcccccC
Q psy6203         245 VEPGKRIKI-----QDLLGHNWVKMG  265 (568)
Q Consensus       245 ~dP~~Rps~-----~ell~hp~~~~~  265 (568)
                      +.|.+|..+     .+|-.||||+..
T Consensus       587 K~P~kRLGcg~~ge~di~~H~FFR~i  612 (683)
T KOG0696|consen  587 KHPGKRLGCGPEGERDIREHPFFRRI  612 (683)
T ss_pred             cCCccccCCCCccccchhhCcchhhc
Confidence            999999864     689999999843


No 203
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00  E-value=8.8e-42  Score=350.30  Aligned_cols=259  Identities=27%  Similarity=0.435  Sum_probs=214.0

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCc-CCchHHHHHHHHHHHhCCCCCcceeeEEEEeC-----
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL-GEDLPRVKLEINALKHISHQHICKLFQVIETS-----   78 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~-----   78 (568)
                      ++.++|++.+.||+|+||+||+|.+..+++.||+|.+..... ......+.+|+.+++.++||||+++++++...     
T Consensus         2 ~~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~   81 (337)
T cd07858           2 EVDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAF   81 (337)
T ss_pred             ccccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheeccccccc
Confidence            357899999999999999999999999999999999875422 22345667899999999999999999987644     


Q ss_pred             CEEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCC
Q psy6203          79 SHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEG  158 (568)
Q Consensus        79 ~~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  158 (568)
                      ...|+||||+. ++|.+++...+.+++..+..++.|++.||.|||+++++||||||+||+++.++.+||+|||++.....
T Consensus        82 ~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  160 (337)
T cd07858          82 NDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSE  160 (337)
T ss_pred             CcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCC
Confidence            35899999995 78999998888899999999999999999999999999999999999999999999999999876543


Q ss_pred             CCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc---C------------
Q psy6203         159 GLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN---G------------  223 (568)
Q Consensus       159 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~---~------------  223 (568)
                      .. .......++..|+|||.+.+...++.++|||||||++|+|++|..||.+.+.......+..   .            
T Consensus       161 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (337)
T cd07858         161 KG-DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNE  239 (337)
T ss_pred             Cc-ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCch
Confidence            21 2223456789999999987644478999999999999999999999987654332221110   0            


Q ss_pred             ----------CC------CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcCcccccC
Q psy6203         224 ----------KY------TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       224 ----------~~------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                                ..      ...+.+++.+.++|++||+.||++|||++++++||||...
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~  297 (337)
T cd07858         240 KARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASL  297 (337)
T ss_pred             hhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhh
Confidence                      00      0123478899999999999999999999999999999853


No 204
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00  E-value=1.9e-41  Score=335.38  Aligned_cols=249  Identities=24%  Similarity=0.431  Sum_probs=215.0

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      ...|.+.+.||+|+||.||+|.+..+++.||+|++....  .....+.+|+.+++.++||||+++++++...+.+++|||
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (263)
T cd05052           5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE   82 (263)
T ss_pred             hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc--hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEE
Confidence            356999999999999999999999999999999987542  234568889999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          87 YCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        87 ~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |+++++|.+++...  ..+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||++...........
T Consensus        83 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~  162 (263)
T cd05052          83 FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAH  162 (263)
T ss_pred             eCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeecc
Confidence            99999999998754  3588999999999999999999999999999999999999999999999999876543321111


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCChHHHHHHHHc
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM  242 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~li~~~  242 (568)
                      ....++..|+|||.+.+.. ++.++|||||||++|+|++ |..||.+.+..+....+..+ ....+...++++.++|.+|
T Consensus       163 ~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c  241 (263)
T cd05052         163 AGAKFPIKWTAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGYRMERPEGCPPKVYELMRAC  241 (263)
T ss_pred             CCCCCccccCCHHHhccCC-CCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
Confidence            2223466899999988766 5889999999999999998 99999988888887777665 3445566889999999999


Q ss_pred             cccCcCCCCCHHHHhc
Q psy6203         243 LQVEPGKRIKIQDLLG  258 (568)
Q Consensus       243 L~~dP~~Rps~~ell~  258 (568)
                      |+.||++|||+.++++
T Consensus       242 l~~~p~~Rp~~~~l~~  257 (263)
T cd05052         242 WQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             ccCCcccCCCHHHHHH
Confidence            9999999999999975


No 205
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00  E-value=8.1e-42  Score=343.50  Aligned_cols=253  Identities=30%  Similarity=0.410  Sum_probs=211.4

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCc-hHHHHHHHHHHHhCCCCCcceeeEEEEeC--CEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLFQVIETS--SHIFMV   84 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~--~~~~lV   84 (568)
                      ++|++.+.||+|+||.||+|.+..+++.+|+|.++.....+. ...+.+|+.++++++||||+++++++...  +..|+|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv   84 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV   84 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence            579999999999999999999999999999999976543322 23566799999999999999999998877  889999


Q ss_pred             EeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          85 IEYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      |||+. ++|.+++... ..+++..++.++.||+.||+|||++|++|+||||+||+++.++.+||+|||++....... ..
T Consensus        85 ~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~~  162 (293)
T cd07843          85 MEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL-KP  162 (293)
T ss_pred             ehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCc-cc
Confidence            99996 5898888764 458999999999999999999999999999999999999999999999999987654321 12


Q ss_pred             cccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC-------------------
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK-------------------  224 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~-------------------  224 (568)
                      .....+++.|+|||.+.+...++.++||||||+++|+|++|.+||...+.......+....                   
T Consensus       163 ~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (293)
T cd07843         163 YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKK  242 (293)
T ss_pred             cccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcc
Confidence            2334578899999998776556889999999999999999999998776555444332110                   


Q ss_pred             ------------CCCCCC-CChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         225 ------------YTEPPW-MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       225 ------------~~~~~~-~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                                  ...+.. +++.+.++|++||+.||++|||+.|++.||||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         243 KTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             cccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence                        001111 47889999999999999999999999999998


No 206
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00  E-value=9.4e-42  Score=341.47  Aligned_cols=254  Identities=23%  Similarity=0.359  Sum_probs=216.6

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      ++|++.+.||+|+||+||++.+..+|+.||+|++...........+.+|+++++.++||||+++++.+...+..++||||
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   84 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF   84 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence            68999999999999999999999999999999987654334456788999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          88 CPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH-LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        88 ~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      +++++|.+++...+.+++..+..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||++......   ....
T Consensus        85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~---~~~~  161 (284)
T cd06620          85 MDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINS---IADT  161 (284)
T ss_pred             CCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhh---ccCc
Confidence            9999999999888889999999999999999999997 59999999999999999999999999997654221   2234


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHH-----------HHHHHHHcCCC-CCCC-CCCh
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-----------QLYDKILNGKY-TEPP-WMSP  233 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~-----------~~~~~i~~~~~-~~~~-~~~~  233 (568)
                      .+|+..|+|||++.+.. ++.++|||||||++|+|++|..||......           +....+..... ..+. .++.
T Consensus       162 ~~~~~~~~aPE~~~~~~-~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T cd06620         162 FVGTSTYMSPERIQGGK-YTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPE  240 (284)
T ss_pred             cccCcccCCHHHHccCC-CCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhcCH
Confidence            57899999999987665 588999999999999999999999765431           22333333222 2222 2678


Q ss_pred             HHHHHHHHccccCcCCCCCHHHHhcCcccccC
Q psy6203         234 NSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       234 ~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                      .+.+|+.+||+.||++|||++|+++|+||...
T Consensus       241 ~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~  272 (284)
T cd06620         241 DLRDFVDACLLKDPTERPTPQQLCAMPPFIQA  272 (284)
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHhcCcccccc
Confidence            89999999999999999999999999999743


No 207
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00  E-value=7.1e-42  Score=340.98  Aligned_cols=254  Identities=32%  Similarity=0.636  Sum_probs=225.9

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCC-CCCcceeeEEEEeCCEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHIS-HQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~~~lV   84 (568)
                      ++|.+.+.||+|+||.||+|.+..+|+.||+|++.+....  .....+.+|+.++++++ ||||+++++++.+.+..++|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv   80 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV   80 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence            5799999999999999999999999999999998764432  22456788999999998 99999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc---
Q psy6203          85 IEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE---  161 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~---  161 (568)
                      ||++++++|.+++...+.+++..+..++.|++.||.+||+.|++|+||+|+||+++.++.++|+|||++........   
T Consensus        81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~  160 (280)
T cd05581          81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPES  160 (280)
T ss_pred             EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccccc
Confidence            99999999999999888999999999999999999999999999999999999999999999999999875433211   


Q ss_pred             ----------------cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC
Q psy6203         162 ----------------SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY  225 (568)
Q Consensus       162 ----------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~  225 (568)
                                      .......++..|+|||++.+.. .+.++||||||++++++++|..||...+.......+.....
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~  239 (280)
T cd05581         161 NKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKP-AGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEY  239 (280)
T ss_pred             CCCCCccccccccccccccccccCCccccCHHHhCCCC-CChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCC
Confidence                            1222345788999999987765 58899999999999999999999998887777777777777


Q ss_pred             CCCCCCChHHHHHHHHccccCcCCCCCH----HHHhcCccc
Q psy6203         226 TEPPWMSPNSRQIVRSMLQVEPGKRIKI----QDLLGHNWV  262 (568)
Q Consensus       226 ~~~~~~~~~~~~li~~~L~~dP~~Rps~----~ell~hp~~  262 (568)
                      ..+..+++.+.++|.+||+.||++|||+    +++++||||
T Consensus       240 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         240 SFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             CCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            8888889999999999999999999999    999999997


No 208
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of 
Probab=100.00  E-value=9.6e-42  Score=340.14  Aligned_cols=246  Identities=30%  Similarity=0.501  Sum_probs=210.6

Q ss_pred             ecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCCCh
Q psy6203          16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGEL   93 (568)
Q Consensus        16 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g~L   93 (568)
                      ||+|+||+||+|.+..+|+.||+|++.+....  .....+..|+.++++++||||+++++++...+..|+||||+++++|
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL   80 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence            69999999999999999999999998764332  2234566799999999999999999999999999999999999999


Q ss_pred             HHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCCc
Q psy6203          94 LDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSP  171 (568)
Q Consensus        94 ~~~i~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~  171 (568)
                      .+++....  .+++..+..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||.+......  .......++.
T Consensus        81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~--~~~~~~~~~~  158 (277)
T cd05577          81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGG--KKIKGRAGTP  158 (277)
T ss_pred             HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccC--CccccccCCC
Confidence            99998765  7999999999999999999999999999999999999999999999999998754332  2223446788


Q ss_pred             cccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCH----HHHHHHHHcCCCCCCCCCChHHHHHHHHccccCc
Q psy6203         172 NYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSI----DQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP  247 (568)
Q Consensus       172 ~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP  247 (568)
                      .|+|||.+.+.. ++.++|||||||++|+|++|+.||.....    ..+...+.......+...++.+.++|.+||+.||
T Consensus       159 ~y~~PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  237 (277)
T cd05577         159 GYMAPEVLQGEV-YDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDP  237 (277)
T ss_pred             CcCCHHHhcCCC-CCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCCh
Confidence            999999998766 68899999999999999999999976543    3333444444445556689999999999999999


Q ss_pred             CCCC-----CHHHHhcCccccc
Q psy6203         248 GKRI-----KIQDLLGHNWVKM  264 (568)
Q Consensus       248 ~~Rp-----s~~ell~hp~~~~  264 (568)
                      .+||     ++.+++.||||+.
T Consensus       238 ~~R~~~~~~~~~~ll~h~~~~~  259 (277)
T cd05577         238 EKRLGCRGGSADEVREHPLFKD  259 (277)
T ss_pred             hHccCCCcccHHHHHhChhhhc
Confidence            9999     8999999999973


No 209
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00  E-value=2.8e-41  Score=337.58  Aligned_cols=254  Identities=24%  Similarity=0.418  Sum_probs=207.2

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHH-HHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINA-LKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~-l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|+++.....+....+..|+.+ ++.++||||+++++++...+..|+|||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e   80 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME   80 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence            5799999999999999999999999999999999765443333455556664 566789999999999999999999999


Q ss_pred             ccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHc-CceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          87 YCPGGELLDHIVE----RQRLGEKESRAFFRQILSAVAYLHHL-GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        87 ~~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      |++ |+|.+++..    +..+++..+..++.||+.||.|||++ +++||||||+||+++.++.+||+|||++....... 
T Consensus        81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~-  158 (283)
T cd06617          81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV-  158 (283)
T ss_pred             hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc-
Confidence            996 678777754    24689999999999999999999997 99999999999999999999999999987653321 


Q ss_pred             cccccccCCccccccccccCc---ccCCcccceechhhHHHHHHhCCCCCCCC--CHHHHHHHHHcCCCCCC-CCCChHH
Q psy6203         162 SQLQTSCGSPNYAAPEVIKGK---QYYGSETDVWSMGVMLYALLCGFLPFDSD--SIDQLYDKILNGKYTEP-PWMSPNS  235 (568)
Q Consensus       162 ~~~~~~~gt~~y~aPE~l~~~---~~~~~~~DiwSlG~il~~lltG~~pf~~~--~~~~~~~~i~~~~~~~~-~~~~~~~  235 (568)
                       ......|+..|+|||.+.+.   ..++.++|+|||||++|+|++|..||...  ....+...+.......+ ..++.++
T Consensus       159 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  237 (283)
T cd06617         159 -AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEKFSPEF  237 (283)
T ss_pred             -ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccccCHHH
Confidence             11234688899999998652   23578999999999999999999999642  22333333322222222 3478999


Q ss_pred             HHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         236 RQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       236 ~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      .++|.+||..+|.+|||+++++.||||..
T Consensus       238 ~~li~~~l~~~p~~Rp~~~~il~~~~~~~  266 (283)
T cd06617         238 QDFVNKCLKKNYKERPNYPELLQHPFFEL  266 (283)
T ss_pred             HHHHHHHccCChhhCcCHHHHhcCchhhh
Confidence            99999999999999999999999999984


No 210
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00  E-value=2.7e-41  Score=333.69  Aligned_cols=252  Identities=31%  Similarity=0.531  Sum_probs=219.7

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEe--CCEEEEEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIET--SSHIFMVI   85 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~--~~~~~lV~   85 (568)
                      +|++.+.||.|+||.||+|.+..+|..||+|++...... .....+..|+.+++.++||||+++++.+..  ....|++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM   80 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence            589999999999999999999999999999998765433 234567889999999999999999998753  45689999


Q ss_pred             eccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH-----HcCceecCCCCCceEEcCCCCeEEEeecCccCC
Q psy6203          86 EYCPGGELLDHIVE----RQRLGEKESRAFFRQILSAVAYLH-----HLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKP  156 (568)
Q Consensus        86 E~~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~aL~~LH-----~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  156 (568)
                      ||+++++|.+++..    ...+++..+..++.||+.||.|||     +.+++|+||+|+||+++.++.+||+|||++...
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~  160 (265)
T cd08217          81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL  160 (265)
T ss_pred             hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence            99999999999865    367899999999999999999999     999999999999999999999999999998865


Q ss_pred             CCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-CCCCCChHH
Q psy6203         157 EGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNS  235 (568)
Q Consensus       157 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~  235 (568)
                      .... .......+++.|+|||.+.+.. ++.++|+||||+++|+|++|..||...+...+.+.+..+... .+...+..+
T Consensus       161 ~~~~-~~~~~~~~~~~~~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (265)
T cd08217         161 GHDS-SFAKTYVGTPYYMSPEQLNHMS-YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFRRIPYRYSSEL  238 (265)
T ss_pred             cCCc-ccccccccCCCccChhhhcCCC-CCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCCCCccccCHHH
Confidence            4432 1133456899999999998766 588999999999999999999999988877777777776653 455688999


Q ss_pred             HHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         236 RQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       236 ~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                      .+++.+||+.+|++|||+.++++|||+
T Consensus       239 ~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         239 NEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             HHHHHHHccCCcccCCCHHHHhhCCCC
Confidence            999999999999999999999999996


No 211
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 
Probab=100.00  E-value=1.7e-42  Score=345.47  Aligned_cols=255  Identities=27%  Similarity=0.410  Sum_probs=218.0

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ..+.|++.+.||+|+||.||+|.+..++..||+|.+...........+.+|+.++++++||||+++++.+...+..|+||
T Consensus         2 ~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (277)
T cd06642           2 PEELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIM   81 (277)
T ss_pred             hHHHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEE
Confidence            45678888999999999999999999999999999875544344567889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      ||+++++|.+++.. ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++....... ....
T Consensus        82 e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~-~~~~  159 (277)
T cd06642          82 EYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ-IKRN  159 (277)
T ss_pred             EccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcc-hhhh
Confidence            99999999988754 678999999999999999999999999999999999999999999999999987544321 1223


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-CCCCCCChHHHHHHHHccc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY-TEPPWMSPNSRQIVRSMLQ  244 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~L~  244 (568)
                      ...|+..|+|||.+.+.. ++.++|+|||||++|+|++|..||...........+..+.. ..+...+.++.++|.+||+
T Consensus       160 ~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  238 (277)
T cd06642         160 TFVGTPFWMAPEVIKQSA-YDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQYSKPFKEFVEACLN  238 (277)
T ss_pred             cccCcccccCHHHhCcCC-CchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCCcccCHHHHHHHHHHcc
Confidence            346788999999998765 58899999999999999999999976655554444443332 2334577889999999999


Q ss_pred             cCcCCCCCHHHHhcCcccc
Q psy6203         245 VEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       245 ~dP~~Rps~~ell~hp~~~  263 (568)
                      .+|++|||+.+++.||||.
T Consensus       239 ~~p~~Rp~~~~il~~~~~~  257 (277)
T cd06642         239 KDPRFRPTAKELLKHKFIT  257 (277)
T ss_pred             CCcccCcCHHHHHHhHHHH
Confidence            9999999999999999997


No 212
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00  E-value=1.5e-41  Score=339.55  Aligned_cols=255  Identities=29%  Similarity=0.440  Sum_probs=210.9

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEe------
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIET------   77 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~------   77 (568)
                      ...+.|++.+.||.|+||.||+|.+..+++.+|+|++....  .....+..|+.+++++ +||||+++++++..      
T Consensus        13 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~   90 (282)
T cd06636          13 DPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE--DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGH   90 (282)
T ss_pred             ChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh--HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCC
Confidence            34578999999999999999999999999999999986543  2335678899999998 69999999999843      


Q ss_pred             CCEEEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccC
Q psy6203          78 SSHIFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAK  155 (568)
Q Consensus        78 ~~~~~lV~E~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~  155 (568)
                      .+..|+||||+++|+|.+++...  ..+++..+..++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++..
T Consensus        91 ~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~  170 (282)
T cd06636          91 DDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ  170 (282)
T ss_pred             CCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhh
Confidence            46789999999999999998753  4588999999999999999999999999999999999999999999999999875


Q ss_pred             CCCCCccccccccCCccccccccccC----cccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC--CCC
Q psy6203         156 PEGGLESQLQTSCGSPNYAAPEVIKG----KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPP  229 (568)
Q Consensus       156 ~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~--~~~  229 (568)
                      ..... .......|++.|+|||.+..    ...++.++|||||||++|+|++|..||...........+......  ...
T Consensus       171 ~~~~~-~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  249 (282)
T cd06636         171 LDRTV-GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSK  249 (282)
T ss_pred             hhccc-cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCccc
Confidence            43211 12334568999999999853    223578899999999999999999999766544433333332221  123


Q ss_pred             CCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         230 WMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       230 ~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                      .++.++.+||.+||+.||.+|||+.|++.||||
T Consensus       250 ~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         250 KWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             ccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            478899999999999999999999999999997


No 213
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase,  Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the 
Probab=100.00  E-value=1.1e-41  Score=349.06  Aligned_cols=260  Identities=26%  Similarity=0.424  Sum_probs=213.7

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEe----CCE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIET----SSH   80 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~----~~~   80 (568)
                      +.++|++.+.||+|++|.||+|.+..+|+.||+|++...... .....+.+|+.++++++||||+++++++..    ...
T Consensus         3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~   82 (334)
T cd07855           3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD   82 (334)
T ss_pred             hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence            568999999999999999999999999999999998754322 234567789999999999999999998753    357


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC
Q psy6203          81 IFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL  160 (568)
Q Consensus        81 ~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  160 (568)
                      .|+||||+. ++|.+++...+.+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus        83 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~  161 (334)
T cd07855          83 VYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSP  161 (334)
T ss_pred             EEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccC
Confidence            899999995 6899999877889999999999999999999999999999999999999999999999999986543221


Q ss_pred             c---cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc--C------------
Q psy6203         161 E---SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN--G------------  223 (568)
Q Consensus       161 ~---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~--~------------  223 (568)
                      .   .......|+..|+|||.+.+...++.++|||||||++|+|++|+.||.+.+.......+..  +            
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  241 (334)
T cd07855         162 TEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGS  241 (334)
T ss_pred             cCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhch
Confidence            1   1123447899999999987655568999999999999999999999977654332221111  0            


Q ss_pred             --------CC----CC-----CCCCChHHHHHHHHccccCcCCCCCHHHHhcCcccccCC
Q psy6203         224 --------KY----TE-----PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGP  266 (568)
Q Consensus       224 --------~~----~~-----~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  266 (568)
                              ..    ..     .+..++++.++|++||+.||.+|||+++++.||||...+
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~  301 (334)
T cd07855         242 DRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYH  301 (334)
T ss_pred             hhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhcc
Confidence                    00    00     133688999999999999999999999999999997543


No 214
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00  E-value=2.6e-41  Score=333.86  Aligned_cols=255  Identities=29%  Similarity=0.456  Sum_probs=222.3

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      ++|++.+.||+|++|.||+|.+..+++.||+|++...........+.+|+..+++++||||+++++++...+..++||||
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY   80 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence            57999999999999999999999999999999987654333456788999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          88 CPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH-LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        88 ~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      +++++|.+++.....+++..+..++.|++.||.|||+ .|++||||+|+||+++.++.++|+|||++....... .....
T Consensus        81 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~-~~~~~  159 (264)
T cd06623          81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTL-DQCNT  159 (264)
T ss_pred             cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCC-Ccccc
Confidence            9999999999888889999999999999999999999 999999999999999999999999999987654322 12224


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCC---CHHHHHHHHHcCCC-CCCCC-CChHHHHHHHH
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSD---SIDQLYDKILNGKY-TEPPW-MSPNSRQIVRS  241 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~---~~~~~~~~i~~~~~-~~~~~-~~~~~~~li~~  241 (568)
                      ..++..|+|||.+.+.. ++.++|+||||+++|+|++|..||...   ...+....+..... ..+.. ++..+.++|.+
T Consensus       160 ~~~~~~y~~pE~~~~~~-~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  238 (264)
T cd06623         160 FVGTVTYMSPERIQGES-YSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISA  238 (264)
T ss_pred             eeecccccCHhhhCCCC-CCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHH
Confidence            56789999999987764 688999999999999999999999776   45555555554433 33444 78899999999


Q ss_pred             ccccCcCCCCCHHHHhcCccccc
Q psy6203         242 MLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       242 ~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      ||..+|++|||+.++++||||+.
T Consensus       239 ~l~~~p~~R~~~~~ll~~~~~~~  261 (264)
T cd06623         239 CLQKDPKKRPSAAELLQHPFIKK  261 (264)
T ss_pred             HccCChhhCCCHHHHHhCHHHHh
Confidence            99999999999999999999974


No 215
>KOG0603|consensus
Probab=100.00  E-value=1.1e-42  Score=356.50  Aligned_cols=247  Identities=31%  Similarity=0.537  Sum_probs=217.3

Q ss_pred             ccccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEE
Q psy6203           3 YIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIETSSHI   81 (568)
Q Consensus         3 ~~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~   81 (568)
                      ...+.+.|.+...+|.|+||.|..+.+..+++..++|++.+...     ....|+.++... +||||+++++++.+..+.
T Consensus       317 ~~~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~-----~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~  391 (612)
T KOG0603|consen  317 TAPFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD-----DNQDEIPISLLVRDHPNIVKSHDVYEDGKEI  391 (612)
T ss_pred             cCCcchhhccccccCCCCccceeeeeccccccchhheecccccc-----ccccccchhhhhcCCCcceeecceecCCcee
Confidence            44678899999999999999999999999999999999987622     233466555544 699999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEE-cCCCCeEEEeecCccCCCCCC
Q psy6203          82 FMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLL-DRNQNLKLIDFGLCAKPEGGL  160 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll-~~~~~~kl~DFG~a~~~~~~~  160 (568)
                      |+|||++.|+.|.+.+.....+. .++..|+.+|+.|+.|||++|||||||||+|||+ ++.|+++|+|||.++..... 
T Consensus       392 ~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-  469 (612)
T KOG0603|consen  392 YLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-  469 (612)
T ss_pred             eeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence            99999999999999998776666 8888999999999999999999999999999999 68899999999998865543 


Q ss_pred             ccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCCCCChHHHHHH
Q psy6203         161 ESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYDKILNGKYTEPPWMSPNSRQIV  239 (568)
Q Consensus       161 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~li  239 (568)
                         ..+.|-|..|.|||++.... |++++||||||++||+|++|..||...... ++..++..+.+.  ..+|.++++||
T Consensus       470 ---~~tp~~t~~y~APEvl~~~~-yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s--~~vS~~AKdLl  543 (612)
T KOG0603|consen  470 ---CDTPALTLQYVAPEVLAIQE-YTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS--ECVSDEAKDLL  543 (612)
T ss_pred             ---hcccchhhcccChhhhccCC-CCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc--cccCHHHHHHH
Confidence               34557789999999999666 699999999999999999999999776555 777777666554  78999999999


Q ss_pred             HHccccCcCCCCCHHHHhcCccc
Q psy6203         240 RSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       240 ~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                      .+||+.||.+|+++.+++.|||+
T Consensus       544 ~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  544 QQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             HHhccCChhhCcChhhhccCcch
Confidence            99999999999999999999999


No 216
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00  E-value=1.7e-41  Score=336.48  Aligned_cols=247  Identities=28%  Similarity=0.455  Sum_probs=205.6

Q ss_pred             ccccCeEEEeee--cccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEE
Q psy6203           5 DLRNQYILERTV--GSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIETSSHI   81 (568)
Q Consensus         5 ~~~~~Y~i~~~l--G~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~   81 (568)
                      ++.++|++.+.+  |+|+||.||++.++.++..+|+|++........      |+.....+ +||||+++++.+...+..
T Consensus        11 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~------e~~~~~~~~~h~~iv~~~~~~~~~~~~   84 (267)
T PHA03390         11 QFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI------EPMVHQLMKDNPNFIKLYYSVTTLKGH   84 (267)
T ss_pred             HHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh------hHHHHHHhhcCCCEEEEEEEEecCCee
Confidence            345677887777  999999999999999999999999876533211      22222222 799999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCC-CeEEEeecCccCCCCCC
Q psy6203          82 FMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQ-NLKLIDFGLCAKPEGGL  160 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-~~kl~DFG~a~~~~~~~  160 (568)
                      |+||||+++++|.+++..+..+++.++..++.||+.||.|||+.|++||||||+||+++.++ .++|+|||++...... 
T Consensus        85 ~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~-  163 (267)
T PHA03390         85 VLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP-  163 (267)
T ss_pred             EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC-
Confidence            99999999999999998888999999999999999999999999999999999999999988 9999999998754322 


Q ss_pred             ccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHH----HHHHHcCCCCCCCCCChHHH
Q psy6203         161 ESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQL----YDKILNGKYTEPPWMSPNSR  236 (568)
Q Consensus       161 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~~~  236 (568)
                          ....|+..|+|||++.+.. ++.++||||+|+++|+|++|..||........    ...........+...++.+.
T Consensus       164 ----~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (267)
T PHA03390        164 ----SCYDGTLDYFSPEKIKGHN-YDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNAN  238 (267)
T ss_pred             ----ccCCCCCcccChhhhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHH
Confidence                2345889999999998766 58899999999999999999999975543221    11112333344556899999


Q ss_pred             HHHHHccccCcCCCCC-HHHHhcCcccc
Q psy6203         237 QIVRSMLQVEPGKRIK-IQDLLGHNWVK  263 (568)
Q Consensus       237 ~li~~~L~~dP~~Rps-~~ell~hp~~~  263 (568)
                      ++|.+||+.||.+||+ ++|+|+||||+
T Consensus       239 ~li~~~l~~~p~~R~~~~~~~l~h~~~~  266 (267)
T PHA03390        239 DFVQSMLKYNINYRLTNYNEIIKHPFLK  266 (267)
T ss_pred             HHHHHHhccChhhCCchHHHHhcCCccc
Confidence            9999999999999996 69999999996


No 217
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00  E-value=1.9e-41  Score=350.05  Aligned_cols=252  Identities=27%  Similarity=0.470  Sum_probs=207.7

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeC------
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETS------   78 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~------   78 (568)
                      +.++|++.+.||+|+||.||+|.+..+|+.||+|++.+.... .....+.+|+.++++++||||+++++++...      
T Consensus        14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   93 (353)
T cd07850          14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF   93 (353)
T ss_pred             hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence            568999999999999999999999999999999998754322 2345677899999999999999999988643      


Q ss_pred             CEEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCC
Q psy6203          79 SHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEG  158 (568)
Q Consensus        79 ~~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  158 (568)
                      ...|+||||+. ++|.+.+...  +++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus        94 ~~~~lv~e~~~-~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~  170 (353)
T cd07850          94 QDVYLVMELMD-ANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT  170 (353)
T ss_pred             CcEEEEEeccC-CCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCC
Confidence            35799999995 5888877543  89999999999999999999999999999999999999999999999999876543


Q ss_pred             CCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC---------------
Q psy6203         159 GLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG---------------  223 (568)
Q Consensus       159 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~---------------  223 (568)
                      .  .......+++.|+|||.+.+.. ++.++|||||||++|+|++|+.||...+.......+...               
T Consensus       171 ~--~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (353)
T cd07850         171 S--FMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPT  247 (353)
T ss_pred             C--CCCCCCcccccccCHHHHhCCC-CCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhh
Confidence            2  1233456889999999998766 589999999999999999999999876644333332110               


Q ss_pred             -------CCC--------------C-------CCCCChHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q psy6203         224 -------KYT--------------E-------PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       224 -------~~~--------------~-------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                             ...              .       +...++.+.++|.+||+.||.+|||+.|+|.||||+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~  315 (353)
T cd07850         248 VRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYIN  315 (353)
T ss_pred             hhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHh
Confidence                   000              0       112355689999999999999999999999999997


No 218
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00  E-value=2.1e-41  Score=337.68  Aligned_cols=256  Identities=27%  Similarity=0.423  Sum_probs=220.4

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ..+-|++.+.||+|+||.||+|.+..++..||+|++...........+.+|+.++++++||||+++++.+..++..|+||
T Consensus         2 ~~~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   81 (277)
T cd06641           2 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM   81 (277)
T ss_pred             HHHhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEE
Confidence            34668899999999999999999998999999999875544344567888999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      ||+++++|.+++.. ..+++..+..++.|++.||.+||++|++|+||+|+||+++.++.++|+|||++...... .....
T Consensus        82 e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~-~~~~~  159 (277)
T cd06641          82 EYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDT-QIKRN  159 (277)
T ss_pred             EeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccc-hhhhc
Confidence            99999999988854 57899999999999999999999999999999999999999999999999998654332 11223


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-CCCCCCChHHHHHHHHccc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY-TEPPWMSPNSRQIVRSMLQ  244 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~L~  244 (568)
                      ...++..|+|||.+.+.. .+.++|+||+||++|+|++|..||...+.......+..+.. ..+..++.++.+++.+||+
T Consensus       160 ~~~~~~~y~~PE~~~~~~-~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  238 (277)
T cd06641         160 TFVGTPFWMAPEVIKQSA-YDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEGNYSKPLKEFVEACLN  238 (277)
T ss_pred             cccCCccccChhhhccCC-CCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcc
Confidence            346888999999987665 57899999999999999999999987776666655554433 2445678899999999999


Q ss_pred             cCcCCCCCHHHHhcCccccc
Q psy6203         245 VEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       245 ~dP~~Rps~~ell~hp~~~~  264 (568)
                      .+|.+||++.+++.||||..
T Consensus       239 ~~p~~Rp~~~~~l~~~~~~~  258 (277)
T cd06641         239 KEPSFRPTAKELLKHKFIVR  258 (277)
T ss_pred             CChhhCcCHHHHHhCHHHhh
Confidence            99999999999999999984


No 219
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00  E-value=3.4e-41  Score=332.04  Aligned_cols=247  Identities=24%  Similarity=0.414  Sum_probs=211.3

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      ++|++.+.||+|+||.||++..+ .+..+|+|.+.....  ....+.+|+.++++++||||+++++++...+..++||||
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~   80 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAM--SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEF   80 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCc--cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEc
Confidence            56899999999999999999875 456899998764432  235678899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          88 CPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        88 ~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      +++|+|.+++... +.+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||.+.............
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~  160 (256)
T cd05114          81 MENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSG  160 (256)
T ss_pred             CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCC
Confidence            9999999998753 568999999999999999999999999999999999999999999999999987643322211122


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCC-CCCCCChHHHHHHHHccc
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNSRQIVRSMLQ  244 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~li~~~L~  244 (568)
                      ..++..|+|||++.+.. ++.++||||||+++|+|++ |+.||...+..+....+..+... .+...+..+.+++.+||+
T Consensus       161 ~~~~~~y~aPE~~~~~~-~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~c~~  239 (256)
T cd05114         161 AKFPVKWSPPEVFNFSK-YSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPKLASMTVYEVMYSCWH  239 (256)
T ss_pred             CCCchhhCChhhcccCc-cchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcc
Confidence            23566899999998665 5889999999999999999 99999988888888888776543 345578889999999999


Q ss_pred             cCcCCCCCHHHHhc
Q psy6203         245 VEPGKRIKIQDLLG  258 (568)
Q Consensus       245 ~dP~~Rps~~ell~  258 (568)
                      .||.+|||++++++
T Consensus       240 ~~p~~Rps~~~l~~  253 (256)
T cd05114         240 EKPEGRPTFAELLR  253 (256)
T ss_pred             CCcccCcCHHHHHH
Confidence            99999999999975


No 220
>KOG0577|consensus
Probab=100.00  E-value=5.7e-43  Score=351.73  Aligned_cols=251  Identities=30%  Similarity=0.393  Sum_probs=215.0

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      ...|.-++.||.|+||-||-|++..+.+.||||.+..+...  +.+..+..|+..|++++|||+|.+-++|-.+...|||
T Consensus        25 Eklf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLV  104 (948)
T KOG0577|consen   25 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLV  104 (948)
T ss_pred             HHHHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHH
Confidence            34566778899999999999999999999999998754322  3456788899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          85 IEYCPGGELLDHIV-ERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        85 ~E~~~~g~L~~~i~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      |||| -|+-.|++. -++++-+.++..|+.+.+.||.|||+.+.||||||..|||+++.|.|||+|||.|....     .
T Consensus       105 MEYC-lGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~-----P  178 (948)
T KOG0577|consen  105 MEYC-LGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMA-----P  178 (948)
T ss_pred             HHHH-hccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcC-----c
Confidence            9999 567777775 35789999999999999999999999999999999999999999999999999887643     3


Q ss_pred             cccccCCcccccccccc--CcccCCcccceechhhHHHHHHhCCCCCCCCCHHH-HHHHHHcCCCCCC-CCCChHHHHHH
Q psy6203         164 LQTSCGSPNYAAPEVIK--GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQ-LYDKILNGKYTEP-PWMSPNSRQIV  239 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~--~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~-~~~~i~~~~~~~~-~~~~~~~~~li  239 (568)
                      .++++|||+|||||++.  ....|+-++||||||+++.||.-.++|.-..+... ++.-..+..+..+ +..|..+..|+
T Consensus       179 AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fv  258 (948)
T KOG0577|consen  179 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFV  258 (948)
T ss_pred             hhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHH
Confidence            46789999999999985  33447889999999999999999999976666544 4444444444433 34688999999


Q ss_pred             HHccccCcCCCCCHHHHhcCcccc
Q psy6203         240 RSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       240 ~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                      ..||++-|.+|||.+++|.|+|+.
T Consensus       259 d~CLqKipqeRptse~ll~H~fv~  282 (948)
T KOG0577|consen  259 DSCLQKIPQERPTSEELLKHRFVL  282 (948)
T ss_pred             HHHHhhCcccCCcHHHHhhcchhc
Confidence            999999999999999999999997


No 221
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00  E-value=1.4e-41  Score=339.19  Aligned_cols=251  Identities=26%  Similarity=0.400  Sum_probs=215.1

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcC-----CCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVL-----TGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHI   81 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~   81 (568)
                      .++|.+.+.||+|+||.||+|.+..     ++..||+|+++.....+....+.+|+++++.++||||+++++++...+..
T Consensus         4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   83 (280)
T cd05049           4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPP   83 (280)
T ss_pred             hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCe
Confidence            3568999999999999999998753     35789999987654433456788999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhc--------------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEE
Q psy6203          82 FMVIEYCPGGELLDHIVER--------------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKL  147 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~--------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl  147 (568)
                      ++||||+++++|.+++...              ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||
T Consensus        84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl  163 (280)
T cd05049          84 IMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKI  163 (280)
T ss_pred             EEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEE
Confidence            9999999999999999754              24788899999999999999999999999999999999999999999


Q ss_pred             EeecCccCCCCCCc-cccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC
Q psy6203         148 IDFGLCAKPEGGLE-SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY  225 (568)
Q Consensus       148 ~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~  225 (568)
                      +|||++........ .......+++.|+|||++.+.. ++.++|||||||++|+|++ |..||...+..+....+..+..
T Consensus       164 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~  242 (280)
T cd05049         164 GDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRK-FTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRL  242 (280)
T ss_pred             CCcccceecccCcceecCCCCcccceecChhhhccCC-cchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCc
Confidence            99999875432211 1112334578899999998776 5889999999999999998 9999988888888888877765


Q ss_pred             CC-CCCCChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         226 TE-PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       226 ~~-~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      .. +...+..+.+++.+||+.||++|||+.|+++
T Consensus       243 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         243 LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            43 4468899999999999999999999999975


No 222
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00  E-value=2.7e-41  Score=337.82  Aligned_cols=251  Identities=28%  Similarity=0.449  Sum_probs=209.8

Q ss_pred             eEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC-chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEecc
Q psy6203          10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYC   88 (568)
Q Consensus        10 Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~   88 (568)
                      |++.+.||.|++|.||+|.+..+|..||+|++......+ ....+.+|+.+++.++||||+++++++.+.+..|+||||+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~   80 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL   80 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence            678999999999999999999999999999987654332 2346778999999999999999999999999999999999


Q ss_pred             CCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          89 PGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        89 ~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      + ++|.+++....  .+++..+..++.|++.||+|||+++++||||+|+||+++.++.++|+|||++....... .....
T Consensus        81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~-~~~~~  158 (283)
T cd07835          81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPV-RTYTH  158 (283)
T ss_pred             C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCc-cccCc
Confidence            4 68999987665  78999999999999999999999999999999999999999999999999987543221 11223


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC-----------------------
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG-----------------------  223 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~-----------------------  223 (568)
                      ..+++.|+|||++.+...++.++||||||+++|+|++|.+||...+.......+...                       
T Consensus       159 ~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T cd07835         159 EVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFP  238 (283)
T ss_pred             cccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcc
Confidence            356889999999877655688999999999999999999999876653332222110                       


Q ss_pred             --C----CCCCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         224 --K----YTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       224 --~----~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                        .    ....+.+++.+.++|.+||+.||.+|||++|++.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         239 KWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             cccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence              0    01123467889999999999999999999999999998


No 223
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00  E-value=2e-41  Score=334.52  Aligned_cols=247  Identities=33%  Similarity=0.606  Sum_probs=218.1

Q ss_pred             ecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCCCh
Q psy6203          16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGEL   93 (568)
Q Consensus        16 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g~L   93 (568)
                      ||+|+||.||+|.+..+|+.+|+|++......  .....+.+|+.++++++||||+++++.+...+..|+||||+++++|
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL   80 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence            68999999999999999999999998765432  3355788899999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc-------ccccc
Q psy6203          94 LDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE-------SQLQT  166 (568)
Q Consensus        94 ~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-------~~~~~  166 (568)
                      .+++...+.+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++........       .....
T Consensus        81 ~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~  160 (265)
T cd05579          81 ASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKEDKR  160 (265)
T ss_pred             HHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccccC
Confidence            99998878899999999999999999999999999999999999999999999999999775433211       12233


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCC--ChHHHHHHHHccc
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWM--SPNSRQIVRSMLQ  244 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~li~~~L~  244 (568)
                      ..++..|+|||.+.+.. .+.++|+||||+++|+|++|..||......+....+..+....+...  ++.+.+++.+||+
T Consensus       161 ~~~~~~~~~Pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  239 (265)
T cd05579         161 IVGTPDYIAPEVILGQG-HSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLV  239 (265)
T ss_pred             cccCccccCHHHhcCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhc
Confidence            45788999999987766 58899999999999999999999998888888888887766665554  8999999999999


Q ss_pred             cCcCCCCCH---HHHhcCcccc
Q psy6203         245 VEPGKRIKI---QDLLGHNWVK  263 (568)
Q Consensus       245 ~dP~~Rps~---~ell~hp~~~  263 (568)
                      .+|.+|||+   .++|+||||+
T Consensus       240 ~~p~~Rpt~~~~~~~l~~~~~~  261 (265)
T cd05579         240 PDPEKRLGAKSIEEIKNHPFFK  261 (265)
T ss_pred             CCHhhcCCCccHHHHhcCcccc
Confidence            999999999   9999999997


No 224
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00  E-value=2.6e-41  Score=341.56  Aligned_cols=249  Identities=26%  Similarity=0.423  Sum_probs=208.2

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcE--EEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEK--VAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~--vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      ++|++.+.||+|+||.||+|.+..++..  +|+|.+...........+.+|+.++.++ +||||+++++++...+..|+|
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv   86 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA   86 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence            5899999999999999999999887765  4666665332223345678899999999 899999999999999999999


Q ss_pred             EeccCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEE
Q psy6203          85 IEYCPGGELLDHIVERQ----------------RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLI  148 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~----------------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~  148 (568)
                      |||+++++|.+++...+                .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus        87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~  166 (303)
T cd05088          87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA  166 (303)
T ss_pred             EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeC
Confidence            99999999999997542                47889999999999999999999999999999999999999999999


Q ss_pred             eecCccCCCCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CC
Q psy6203         149 DFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YT  226 (568)
Q Consensus       149 DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~  226 (568)
                      |||++......  .......++..|+|||.+.+.. ++.++|||||||++|+|+| |..||...+..+....+..+. ..
T Consensus       167 dfg~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~  243 (303)
T cd05088         167 DFGLSRGQEVY--VKKTMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLE  243 (303)
T ss_pred             ccccCcccchh--hhcccCCCcccccCHHHHhccC-CcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCcCC
Confidence            99998643211  1111223466799999987665 6889999999999999998 999998888777777665542 23


Q ss_pred             CCCCCChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         227 EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       227 ~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      .+...++++.+|+.+||+.+|++||++++++.+
T Consensus       244 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         244 KPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            444578999999999999999999999999876


No 225
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00  E-value=5.4e-41  Score=332.56  Aligned_cols=251  Identities=24%  Similarity=0.382  Sum_probs=214.2

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCC---CcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLT---GEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      ++|++.+.||+|+||.||+|.+..+   ...||+|.++..........+.+|+.++++++||||+++++++...+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   83 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII   83 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence            6799999999999999999998654   4579999987654444455678899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc-c
Q psy6203          85 IEYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE-S  162 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~  162 (568)
                      |||+++++|.+++... +.+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++........ .
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~  163 (266)
T cd05033          84 TEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATY  163 (266)
T ss_pred             EEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccce
Confidence            9999999999998764 5789999999999999999999999999999999999999999999999999886542111 1


Q ss_pred             ccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCChHHHHHHH
Q psy6203         163 QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQIVR  240 (568)
Q Consensus       163 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~  240 (568)
                      ......+++.|+|||.+.+.. ++.++||||||+++|+|++ |..||......+....+..+. .+.+...++.+.+++.
T Consensus       164 ~~~~~~~~~~y~~Pe~~~~~~-~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  242 (266)
T cd05033         164 TTKGGKIPIRWTAPEAIAYRK-FTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPMDCPSALYQLML  242 (266)
T ss_pred             eccCCCCCccccChhhhccCC-CccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence            111223467899999988765 5889999999999999998 999998888777777776653 3445567899999999


Q ss_pred             HccccCcCCCCCHHHHhcC
Q psy6203         241 SMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       241 ~~L~~dP~~Rps~~ell~h  259 (568)
                      +||+.+|++||++.+++++
T Consensus       243 ~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         243 DCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             HHcCCCcccCcCHHHHHHH
Confidence            9999999999999999864


No 226
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00  E-value=6.2e-41  Score=337.24  Aligned_cols=255  Identities=28%  Similarity=0.445  Sum_probs=210.0

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      ++|++.+.||+|++|.||+|.+..+|+.||+|.+...... .....+.+|++++++++||||+++++++.+.+..|+|||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE   81 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence            6799999999999999999999999999999998754432 223567889999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcC-CCCeEEEeecCccCCCCCCccc
Q psy6203          87 YCPGGELLDHIVERQR--LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-NQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        87 ~~~~g~L~~~i~~~~~--l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~-~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      |++ ++|.+.+.....  +++..+..++.||+.||+|||++||+||||+|+||+++. ++.+||+|||++....... ..
T Consensus        82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~-~~  159 (294)
T PLN00009         82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV-RT  159 (294)
T ss_pred             ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc-cc
Confidence            995 578888765433  578889999999999999999999999999999999985 4579999999987543321 12


Q ss_pred             cccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC--CC----------------
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--KY----------------  225 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~--~~----------------  225 (568)
                      .....+++.|+|||.+.+...++.++||||+||++|+|++|.+||...+..+....+...  ..                
T Consensus       160 ~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (294)
T PLN00009        160 FTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKS  239 (294)
T ss_pred             cccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhh
Confidence            233457889999999877655688999999999999999999999876654433332210  00                


Q ss_pred             -----C------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         226 -----T------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       226 -----~------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                           .      ..+.+++.+.++|.+||+.||++||++.++++||||..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~  289 (294)
T PLN00009        240 AFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKD  289 (294)
T ss_pred             hcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhH
Confidence                 0      12346788999999999999999999999999999984


No 227
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00  E-value=4.5e-41  Score=345.78  Aligned_cols=256  Identities=27%  Similarity=0.438  Sum_probs=212.5

Q ss_pred             cccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC-chHHHHHHHHHHHhCCCCCcceeeEEEEeCC---
Q psy6203           4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQVIETSS---   79 (568)
Q Consensus         4 ~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~---   79 (568)
                      ..+.++|++.+.||+|+||.||+|.+..+|..||+|++....... ....+.+|+.+++.++||||+++++++....   
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   90 (343)
T cd07880          11 WEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLD   90 (343)
T ss_pred             hccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccc
Confidence            357889999999999999999999999999999999986543222 2346778999999999999999999987553   


Q ss_pred             ---EEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCC
Q psy6203          80 ---HIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKP  156 (568)
Q Consensus        80 ---~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  156 (568)
                         .+++||||+ +++|.+++. ...+++..++.++.||+.||.|||+.||+||||||+||+++.++.++|+|||++...
T Consensus        91 ~~~~~~lv~e~~-~~~l~~~~~-~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~  168 (343)
T cd07880          91 RFHDFYLVMPFM-GTDLGKLMK-HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQT  168 (343)
T ss_pred             ccceEEEEEecC-CCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccc
Confidence               468999999 778887775 467999999999999999999999999999999999999999999999999998765


Q ss_pred             CCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-----------
Q psy6203         157 EGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY-----------  225 (568)
Q Consensus       157 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~-----------  225 (568)
                      ...    .....+++.|+|||.+.+...++.++|+|||||++|+|++|..||...+.......+.....           
T Consensus       169 ~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (343)
T cd07880         169 DSE----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQ  244 (343)
T ss_pred             ccC----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhc
Confidence            332    22345789999999987654468899999999999999999999987665433333222110           


Q ss_pred             --------------------CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcCcccccC
Q psy6203         226 --------------------TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       226 --------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                                          ...+.+++.+.++|.+||+.||.+|||+.+++.||||+..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~  304 (343)
T cd07880         245 SEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEF  304 (343)
T ss_pred             chhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhh
Confidence                                0113467889999999999999999999999999999853


No 228
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00  E-value=6.4e-41  Score=336.46  Aligned_cols=256  Identities=32%  Similarity=0.571  Sum_probs=218.6

Q ss_pred             CeEEEeeecccCCeEEEEEEEc---CCCcEEEEEEeecCCcC---CchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHV---LTGEKVAIKIMKKATLG---EDLPRVKLEINALKHI-SHQHICKLFQVIETSSHI   81 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~---~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~   81 (568)
                      +|++.+.||+|+||.||+|.+.   .+|..||+|++......   .....+.+|+.+++++ +|+||+++++.++.+...
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL   80 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence            5899999999999999999875   47899999998764321   2245678899999999 599999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          82 FMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      |+||||+++++|.+++.....+++..+..++.|++.||.|||+.|++||||+|+|||++.++.+||+|||++........
T Consensus        81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~  160 (290)
T cd05613          81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV  160 (290)
T ss_pred             EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc
Confidence            99999999999999998888899999999999999999999999999999999999999999999999999876543322


Q ss_pred             cccccccCCccccccccccCc-ccCCcccceechhhHHHHHHhCCCCCCCC----CHHHHHHHHHcCCCCCCCCCChHHH
Q psy6203         162 SQLQTSCGSPNYAAPEVIKGK-QYYGSETDVWSMGVMLYALLCGFLPFDSD----SIDQLYDKILNGKYTEPPWMSPNSR  236 (568)
Q Consensus       162 ~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlG~il~~lltG~~pf~~~----~~~~~~~~i~~~~~~~~~~~~~~~~  236 (568)
                      .......|+..|+|||.+.+. ..++.++||||||+++|+|++|..||...    ....+...+.....+.+..+++.+.
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (290)
T cd05613         161 ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAK  240 (290)
T ss_pred             cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCCccCCHHHH
Confidence            223345689999999998753 23578899999999999999999999643    3344555555566666677899999


Q ss_pred             HHHHHccccCcCCCC-----CHHHHhcCccccc
Q psy6203         237 QIVRSMLQVEPGKRI-----KIQDLLGHNWVKM  264 (568)
Q Consensus       237 ~li~~~L~~dP~~Rp-----s~~ell~hp~~~~  264 (568)
                      +++.+||+.||++||     ++++++.||||..
T Consensus       241 ~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~  273 (290)
T cd05613         241 DIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQK  273 (290)
T ss_pred             HHHHHHhcCCHHHhcCCCCCCHHHHHcCccccc
Confidence            999999999999997     8999999999984


No 229
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00  E-value=9.6e-41  Score=334.39  Aligned_cols=256  Identities=27%  Similarity=0.480  Sum_probs=219.3

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ....|...+.||+|++|.||++.+..+++.+|+|.+..... .....+.+|+.+++.++||||+++++++...+..++|+
T Consensus        17 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~   95 (285)
T cd06648          17 PRSYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVM   95 (285)
T ss_pred             chHhhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch-hHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEE
Confidence            34567778899999999999999999999999998864332 23456788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      ||++|++|.+++.. .++++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||++....... ....
T Consensus        96 e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~-~~~~  173 (285)
T cd06648          96 EFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV-PRRK  173 (285)
T ss_pred             eccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCC-cccc
Confidence            99999999999876 679999999999999999999999999999999999999999999999999876543321 1223


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC---CCCCChHHHHHHHHc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE---PPWMSPNSRQIVRSM  242 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~li~~~  242 (568)
                      ...|++.|+|||.+.+.. ++.++||||+||++|+|++|..||...+.......+..+....   +..++..+.+++.+|
T Consensus       174 ~~~~~~~y~aPE~~~~~~-~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  252 (285)
T cd06648         174 SLVGTPYWMAPEVISRLP-YGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRM  252 (285)
T ss_pred             cccCCccccCHHHhcCCC-CCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHH
Confidence            356899999999998766 5889999999999999999999998877766666666553222   233778999999999


Q ss_pred             cccCcCCCCCHHHHhcCcccccC
Q psy6203         243 LQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       243 L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                      |+.+|++|||+.++++||||+..
T Consensus       253 l~~~p~~Rpt~~~il~~~~~~~~  275 (285)
T cd06648         253 LVRDPAQRATAAELLNHPFLAKA  275 (285)
T ss_pred             cccChhhCcCHHHHccCcccccC
Confidence            99999999999999999999853


No 230
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00  E-value=6e-41  Score=336.38  Aligned_cols=256  Identities=21%  Similarity=0.344  Sum_probs=213.2

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcC-----CCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVL-----TGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHI   81 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~   81 (568)
                      .++|++.+.||+|+||.||+|.++.     .+..||+|.+...........+.+|+.+++.++||||+++++++.+.+..
T Consensus         5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (288)
T cd05061           5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT   84 (288)
T ss_pred             HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCc
Confidence            5789999999999999999997652     34579999886543222334577899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeec
Q psy6203          82 FMVIEYCPGGELLDHIVERQ----------RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFG  151 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~~----------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG  151 (568)
                      |+||||+++|+|.+++...+          .++...+..++.||+.||.|||++||+||||||+||+++.++.++|+|||
T Consensus        85 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg  164 (288)
T cd05061          85 LVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG  164 (288)
T ss_pred             EEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCC
Confidence            99999999999999997532          34567889999999999999999999999999999999999999999999


Q ss_pred             CccCCCCCCc-cccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCC
Q psy6203         152 LCAKPEGGLE-SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-TEP  228 (568)
Q Consensus       152 ~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~~~  228 (568)
                      +++....... .......++..|+|||.+.+.. ++.++|||||||++|+|++ |..||.+.+..+....+..+.. ..+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~-~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  243 (288)
T cd05061         165 MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV-FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP  243 (288)
T ss_pred             ccccccccccccccCCCcccccccCHHHhccCC-CChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence            9875432211 1112234567899999988765 5889999999999999998 7899988888777777765543 445


Q ss_pred             CCCChHHHHHHHHccccCcCCCCCHHHHhc------Ccccc
Q psy6203         229 PWMSPNSRQIVRSMLQVEPGKRIKIQDLLG------HNWVK  263 (568)
Q Consensus       229 ~~~~~~~~~li~~~L~~dP~~Rps~~ell~------hp~~~  263 (568)
                      ...++.+.+++.+||+.||++|||+.++++      ||||.
T Consensus       244 ~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~  284 (288)
T cd05061         244 DNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFP  284 (288)
T ss_pred             CCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCC
Confidence            567889999999999999999999999987      89887


No 231
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00  E-value=1.3e-40  Score=329.55  Aligned_cols=253  Identities=28%  Similarity=0.469  Sum_probs=214.6

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCc----CCchHHHHHHHHHHHhCCCCCcceeeEEEEeC--CEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL----GEDLPRVKLEINALKHISHQHICKLFQVIETS--SHI   81 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~--~~~   81 (568)
                      .+|++.+.||+|+||.||+|.+..++..||+|.+.....    ......+.+|+.++++++||||+++++.+.+.  +.+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            689999999999999999999999999999998754321    12345788899999999999999999998664  468


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC-
Q psy6203          82 FMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL-  160 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-  160 (568)
                      ++||||+++++|.+++...+.+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++....... 
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~  161 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM  161 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence            9999999999999999887889999999999999999999999999999999999999999999999999987643211 


Q ss_pred             -ccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CCCCCCCChHHHH
Q psy6203         161 -ESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK--YTEPPWMSPNSRQ  237 (568)
Q Consensus       161 -~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~  237 (568)
                       ........|+..|+|||.+.+.. .+.++|+|||||++|+|++|+.||..........++....  ...+..+++.+.+
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  240 (264)
T cd06653         162 SGTGIKSVTGTPYWMSPEVISGEG-YGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRD  240 (264)
T ss_pred             cCccccccCCcccccCHhhhcCCC-CCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHH
Confidence             11123346889999999998765 5889999999999999999999998766555444444332  3356678899999


Q ss_pred             HHHHccccCcCCCCCHHHHhcCccc
Q psy6203         238 IVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       238 li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                      +|.+||+ +|..||++.+++.|||+
T Consensus       241 ~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         241 FLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             HHHHHhc-CcccCccHHHHhcCCCC
Confidence            9999999 57999999999999985


No 232
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00  E-value=5.6e-41  Score=331.23  Aligned_cols=245  Identities=30%  Similarity=0.562  Sum_probs=209.5

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--chHHHHHHHHHH-HhCCCCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINAL-KHISHQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~Ei~~l-~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      +.||+|+||.||+|.+..+|+.||+|++.+.....  ....+..|..++ ...+||||+++++++...+..|+||||+++
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   81 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG   81 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence            57999999999999999999999999987643321  222344454443 455899999999999999999999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCC
Q psy6203          91 GELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGS  170 (568)
Q Consensus        91 g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt  170 (568)
                      ++|.+++...+.+++..+..++.||+.||.|||+.|++||||+|+||+++.++.++|+|||++.....     .....|+
T Consensus        82 ~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~-----~~~~~~~  156 (260)
T cd05611          82 GDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE-----NKKFVGT  156 (260)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc-----cccCCCC
Confidence            99999998888899999999999999999999999999999999999999999999999998765432     2334688


Q ss_pred             ccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC----CCCCChHHHHHHHHccccC
Q psy6203         171 PNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE----PPWMSPNSRQIVRSMLQVE  246 (568)
Q Consensus       171 ~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~----~~~~~~~~~~li~~~L~~d  246 (568)
                      +.|+|||.+.+.. ++.++||||||+++|+|++|..||...+.......+..+....    ...+++.+.++|.+||+.|
T Consensus       157 ~~y~~pe~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  235 (260)
T cd05611         157 PDYLAPETILGVG-DDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMD  235 (260)
T ss_pred             cCccChhhhcCCC-CcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCC
Confidence            9999999998776 6899999999999999999999999888888777776654432    2347899999999999999


Q ss_pred             cCCCCC---HHHHhcCccccc
Q psy6203         247 PGKRIK---IQDLLGHNWVKM  264 (568)
Q Consensus       247 P~~Rps---~~ell~hp~~~~  264 (568)
                      |++||+   ++|++.||||+.
T Consensus       236 p~~R~~~~~~~~~l~~~~~~~  256 (260)
T cd05611         236 PAKRLGANGYQEIKSHPFFKS  256 (260)
T ss_pred             HHHccCCCcHHHHHcChHhhc
Confidence            999995   579999999973


No 233
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00  E-value=4.7e-41  Score=335.09  Aligned_cols=253  Identities=21%  Similarity=0.322  Sum_probs=211.3

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcC-----CCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVL-----TGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSH   80 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~   80 (568)
                      ..++|++.+.||+|+||.||+|.+..     ++..||+|.+...........+.+|+.+++.++||||+++++++...+.
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~   83 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP   83 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence            46889999999999999999998652     3567999988643322234467889999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcC----------CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEee
Q psy6203          81 IFMVIEYCPGGELLDHIVERQ----------RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDF  150 (568)
Q Consensus        81 ~~lV~E~~~~g~L~~~i~~~~----------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DF  150 (568)
                      .++||||+++++|.+++....          .++...+..++.|++.||.|||+.|++||||||+||+++.++.++|+||
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~df  163 (277)
T cd05062          84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDF  163 (277)
T ss_pred             eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCC
Confidence            999999999999999987532          3567788999999999999999999999999999999999999999999


Q ss_pred             cCccCCCCCCcc-ccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CC
Q psy6203         151 GLCAKPEGGLES-QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-TE  227 (568)
Q Consensus       151 G~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~~  227 (568)
                      |++......... ......+++.|+|||++.+.. ++.++|||||||++|+|++ |..||.+.+.....+.+..+.. ..
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~  242 (277)
T cd05062         164 GMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDK  242 (277)
T ss_pred             CCccccCCcceeecCCCCccCHhhcChhHhhcCC-cCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCC
Confidence            998754322111 112234577899999998765 5899999999999999999 7899998888777777666544 44


Q ss_pred             CCCCChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         228 PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       228 ~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      +...++.+.+++.+||+.||++|||+.|++++
T Consensus       243 ~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         243 PDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            55678899999999999999999999999864


No 234
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include 
Probab=100.00  E-value=1.4e-40  Score=333.60  Aligned_cols=253  Identities=29%  Similarity=0.443  Sum_probs=210.9

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEe--CCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIET--SSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~--~~~~~lV~   85 (568)
                      ++|...+.||.|++|.||+|.+..+++.+|+|.+...........+.+|++++++++||||+++++++.+  .+.+|+||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~   80 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM   80 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence            5799999999999999999999999999999998865443345678899999999999999999998854  34789999


Q ss_pred             eccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          86 EYCPGGELLDHIVE----RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        86 E~~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      ||+++++|.+++..    ...+++..+..++.||+.||.|||+.|++|+||+|+||+++.++.++|+|||++....... 
T Consensus        81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-  159 (287)
T cd06621          81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL-  159 (287)
T ss_pred             EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc-
Confidence            99999999887653    3568999999999999999999999999999999999999999999999999976543221 


Q ss_pred             cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCCCC-C------C
Q psy6203         162 SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSD-----SIDQLYDKILNGKYTE-P------P  229 (568)
Q Consensus       162 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~-----~~~~~~~~i~~~~~~~-~------~  229 (568)
                        .....++..|+|||.+.+.. ++.++|||||||++|+|++|..||...     ...+....+....... +      .
T Consensus       160 --~~~~~~~~~y~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (287)
T cd06621         160 --AGTFTGTSFYMAPERIQGKP-YSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGI  236 (287)
T ss_pred             --cccccCCccccCHHHhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCC
Confidence              12345788999999987765 588999999999999999999999765     2334444444322111 1      1


Q ss_pred             CCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         230 WMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       230 ~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      ..++.+.++|.+||..||.+|||+.|++.||||+.
T Consensus       237 ~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~  271 (287)
T cd06621         237 KWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKA  271 (287)
T ss_pred             chHHHHHHHHHHHcCCCcccCCCHHHHHhCccccc
Confidence            24578999999999999999999999999999973


No 235
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00  E-value=6.4e-41  Score=335.22  Aligned_cols=251  Identities=21%  Similarity=0.343  Sum_probs=211.9

Q ss_pred             cCeEEEeeecccCCeEEEEEEEc----CCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHV----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFM   83 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l   83 (568)
                      +.|++.+.||+|+||+||+|...    .++..+|+|.+...........+.+|+.+++.++||||+++++++...+..|+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l   84 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM   84 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence            57899999999999999999853    35578999998754433344578889999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhc-----------------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeE
Q psy6203          84 VIEYCPGGELLDHIVER-----------------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLK  146 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~~-----------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~k  146 (568)
                      ||||+++++|.+++..+                 ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~k  164 (283)
T cd05090          85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVK  164 (283)
T ss_pred             EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEE
Confidence            99999999999998532                 2477888999999999999999999999999999999999999999


Q ss_pred             EEeecCccCCCCCC-ccccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC
Q psy6203         147 LIDFGLCAKPEGGL-ESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK  224 (568)
Q Consensus       147 l~DFG~a~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~  224 (568)
                      |+|||++....... ........++..|+|||.+.+.. ++.++|||||||++|+|++ |..||.+.+...+.+.+....
T Consensus       165 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~  243 (283)
T cd05090         165 ISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGK-FSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQ  243 (283)
T ss_pred             eccccccccccCCcceecccCCCccceecChHHhccCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence            99999987643321 11223344677899999997765 5899999999999999998 999998877777777766554


Q ss_pred             C-CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         225 Y-TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       225 ~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      . +.+..+++.+.+++.+||+.||.+||++.+++++
T Consensus       244 ~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         244 LLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            3 3455688999999999999999999999999864


No 236
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00  E-value=8.8e-41  Score=329.99  Aligned_cols=248  Identities=25%  Similarity=0.419  Sum_probs=211.5

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      .++|++.++||+|+||.||+|... ++..||+|.+.....  ..+.+.+|+.+++.++||||+++++.+.+.+..++|||
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   81 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM--SVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITE   81 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCch--hHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEe
Confidence            468999999999999999999864 567899998765332  34678889999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          87 YCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        87 ~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |+++++|.+++...  ..+++..+..++.|++.||+|||+.+++||||||+||+++.++.++|+|||++...........
T Consensus        82 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~  161 (261)
T cd05072          82 YMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAR  161 (261)
T ss_pred             cCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceecc
Confidence            99999999998653  5688999999999999999999999999999999999999999999999999876543222222


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCChHHHHHHHHc
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQIVRSM  242 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~~  242 (568)
                      ....++..|+|||.+.+.. ++.++|||||||++|+|++ |..||...........+..+. .+....++.++.+++.+|
T Consensus       162 ~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  240 (261)
T cd05072         162 EGAKFPIKWTAPEAINFGS-FTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMPRMENCPDELYDIMKTC  240 (261)
T ss_pred             CCCccceecCCHHHhccCC-CChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHH
Confidence            2234567899999987765 5889999999999999998 999999888777777776553 233445788999999999


Q ss_pred             cccCcCCCCCHHHHhc
Q psy6203         243 LQVEPGKRIKIQDLLG  258 (568)
Q Consensus       243 L~~dP~~Rps~~ell~  258 (568)
                      |..+|++|||++++++
T Consensus       241 l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         241 WKEKAEERPTFDYLQS  256 (261)
T ss_pred             ccCCcccCcCHHHHHH
Confidence            9999999999999864


No 237
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00  E-value=5e-41  Score=335.00  Aligned_cols=252  Identities=23%  Similarity=0.370  Sum_probs=211.9

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcC-----CCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVL-----TGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHI   81 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~   81 (568)
                      .++|++.+.||+|++|.||+|.+..     ++..||+|.+...........+.+|+.+++.++|+||+++++++.+.+..
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   84 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLPR   84 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCc
Confidence            4689999999999999999999987     77889999886543322344678899999999999999999999988899


Q ss_pred             EEEEeccCCCChHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCC---CeEEEeec
Q psy6203          82 FMVIEYCPGGELLDHIVERQ-------RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQ---NLKLIDFG  151 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~---~~kl~DFG  151 (568)
                      ++||||++|++|.+++...+       .+++..+..++.||+.||+|||+++++||||||+||+++.++   .+||+|||
T Consensus        85 ~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg  164 (277)
T cd05036          85 FILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFG  164 (277)
T ss_pred             EEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCc
Confidence            99999999999999997653       488999999999999999999999999999999999998765   59999999


Q ss_pred             CccCCCCCCcc-ccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcC-CCCCC
Q psy6203         152 LCAKPEGGLES-QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEP  228 (568)
Q Consensus       152 ~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~-~~~~~  228 (568)
                      ++......... .......+..|+|||++.+.. ++.++|||||||++|+|++ |..||...+.......+... ....+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~  243 (277)
T cd05036         165 MARDIYRASYYRKGGRAMLPIKWMPPEAFLDGI-FTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPP  243 (277)
T ss_pred             cccccCCccceecCCCCCccHhhCCHHHHhcCC-cCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCC
Confidence            98765321111 111223356899999998766 6899999999999999997 99999988877777666544 33455


Q ss_pred             CCCChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         229 PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       229 ~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      ..++..+.+++.+||+.||++|||+.++++|
T Consensus       244 ~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         244 KGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            6688999999999999999999999999986


No 238
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00  E-value=4.1e-41  Score=346.18  Aligned_cols=255  Identities=28%  Similarity=0.470  Sum_probs=214.0

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCE---
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSH---   80 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~---   80 (568)
                      ++.++|++.+.||+|++|.||+|++..+++.||+|++...... .....+.+|+.+++.++||||+++++++...+.   
T Consensus        12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07851          12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED   91 (343)
T ss_pred             cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence            5788999999999999999999999999999999998754322 233556789999999999999999988865554   


Q ss_pred             ---EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCC
Q psy6203          81 ---IFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPE  157 (568)
Q Consensus        81 ---~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  157 (568)
                         .++|+||+ +++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+||+++.++.++|+|||++....
T Consensus        92 ~~~~~lv~e~~-~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~  169 (343)
T cd07851          92 FQDVYLVTHLM-GADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTD  169 (343)
T ss_pred             cccEEEEEecC-CCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccc
Confidence               89999999 6799888864 579999999999999999999999999999999999999999999999999987654


Q ss_pred             CCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-----------
Q psy6203         158 GGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-----------  226 (568)
Q Consensus       158 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~-----------  226 (568)
                      ..    .....++..|+|||.+.+...++.++|||||||++|+|++|..||.+.+.......+......           
T Consensus       170 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  245 (343)
T cd07851         170 DE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISS  245 (343)
T ss_pred             cc----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccc
Confidence            32    234467889999999876545688999999999999999999999877665544444322110           


Q ss_pred             --------------------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCcccccC
Q psy6203         227 --------------------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       227 --------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                                          .....++.+.++|.+||+.||.+|||+.+++.||||...
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~  304 (343)
T cd07851         246 ESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEY  304 (343)
T ss_pred             hhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCcccc
Confidence                                012358899999999999999999999999999999853


No 239
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00  E-value=8e-41  Score=329.18  Aligned_cols=252  Identities=29%  Similarity=0.558  Sum_probs=217.6

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      +|.+.+.||+|+||.||+|.++.+|..+|+|.+...... .....+.+|+.+++.++||||+++++.+...+..++|+||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~   80 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY   80 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence            589999999999999999999999999999998765332 2345678899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCC-eEEEeecCccCCCCCCcccc
Q psy6203          88 CPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQN-LKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        88 ~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~-~kl~DFG~a~~~~~~~~~~~  164 (568)
                      +++++|.+++....  .+++..+..++.|++.||.|||+.+++|+||||+||+++.++. +||+|||.+....... ...
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~-~~~  159 (257)
T cd08225          81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM-ELA  159 (257)
T ss_pred             CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc-ccc
Confidence            99999999987643  4789999999999999999999999999999999999988864 6999999987654321 222


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-CCCCCChHHHHHHHHcc
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNSRQIVRSML  243 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~li~~~L  243 (568)
                      ....|++.|+|||++.+.. ++.++|+||||+++|+|++|..||...+..+....+..+... ..+..+.++.++|.+||
T Consensus       160 ~~~~~~~~~~ape~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  238 (257)
T cd08225         160 YTCVGTPYYLSPEICQNRP-YNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFAPISPNFSRDLRSLISQLF  238 (257)
T ss_pred             cccCCCccccCHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHh
Confidence            3346899999999987765 588999999999999999999999887776666666555443 34557889999999999


Q ss_pred             ccCcCCCCCHHHHhcCccc
Q psy6203         244 QVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       244 ~~dP~~Rps~~ell~hp~~  262 (568)
                      ..+|++|||+.|++.||||
T Consensus       239 ~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         239 KVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             ccChhhCcCHHHHhhCCCC
Confidence            9999999999999999997


No 240
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They 
Probab=100.00  E-value=1.7e-40  Score=326.47  Aligned_cols=252  Identities=31%  Similarity=0.559  Sum_probs=222.5

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      +|.+.+.||.|+||.||++.+..++..||+|++...... .....+..|+++++.++|||++++++.+...+..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~   80 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY   80 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence            689999999999999999999999999999999765432 3456788899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          88 CPGGELLDHIVER----QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        88 ~~~g~L~~~i~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      +++++|.+++...    ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++....... ..
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-~~  159 (258)
T cd08215          81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV-DL  159 (258)
T ss_pred             cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc-ce
Confidence            9999999999764    679999999999999999999999999999999999999999999999999987654332 12


Q ss_pred             cccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-CCCCCChHHHHHHHHc
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNSRQIVRSM  242 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~li~~~  242 (568)
                      .....|++.|+|||.+.+.. ++.++|+||+|+++|+|++|..||...+..++.......... .+...+..+.+++.+|
T Consensus       160 ~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  238 (258)
T cd08215         160 AKTVVGTPYYLSPELCQNKP-YNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQYSSELRNLVSSL  238 (258)
T ss_pred             ecceeeeecccChhHhccCC-CCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence            33456889999999987766 588999999999999999999999888877777777665443 3446889999999999


Q ss_pred             cccCcCCCCCHHHHhcCccc
Q psy6203         243 LQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       243 L~~dP~~Rps~~ell~hp~~  262 (568)
                      |..+|++|||+.++|+||||
T Consensus       239 l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         239 LQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             cCCChhhCcCHHHHhcCCCC
Confidence            99999999999999999997


No 241
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00  E-value=5.9e-41  Score=330.43  Aligned_cols=248  Identities=26%  Similarity=0.450  Sum_probs=210.1

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      .+|++.+.||+|+||.||+|.+. ++..+|+|++.....  ....+.+|+.+++.++||||+++++++...+..|+||||
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAM--SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEY   80 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCC--CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEec
Confidence            46889999999999999999876 567899999865432  234677899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          88 CPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        88 ~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      ++|++|.+++..+ ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||+++............
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~  160 (256)
T cd05059          81 MANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQG  160 (256)
T ss_pred             CCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccCC
Confidence            9999999999764 568999999999999999999999999999999999999999999999999987543321111111


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCChHHHHHHHHccc
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQIVRSMLQ  244 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~~L~  244 (568)
                      ..++..|+|||.+.+.. ++.++||||||+++|+|++ |..||...+..+....+..+. ...+...++.+.+++.+||.
T Consensus       161 ~~~~~~y~~Pe~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  239 (256)
T cd05059         161 TKFPVKWAPPEVFDYSR-FSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYRPKLAPTEVYTIMYSCWH  239 (256)
T ss_pred             CCCCccccCHHHhccCC-CCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhc
Confidence            22345799999998765 5889999999999999999 899998887777777776653 34455679999999999999


Q ss_pred             cCcCCCCCHHHHhcC
Q psy6203         245 VEPGKRIKIQDLLGH  259 (568)
Q Consensus       245 ~dP~~Rps~~ell~h  259 (568)
                      .+|++|||+.|+++.
T Consensus       240 ~~p~~Rpt~~~~l~~  254 (256)
T cd05059         240 EKPEDRPAFKKLLSQ  254 (256)
T ss_pred             CChhhCcCHHHHHHH
Confidence            999999999999863


No 242
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular 
Probab=100.00  E-value=6.7e-41  Score=329.07  Aligned_cols=244  Identities=25%  Similarity=0.426  Sum_probs=205.3

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCCCh
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGEL   93 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g~L   93 (568)
                      +.||+|+||.||+|.+..+++.||+|.+......+....+.+|+.+++.++||||+++++++...+..|+||||+++++|
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   80 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF   80 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence            46999999999999999999999999886543333345788999999999999999999999999999999999999999


Q ss_pred             HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc-ccccCCc
Q psy6203          94 LDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL-QTSCGSP  171 (568)
Q Consensus        94 ~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~-~~~~gt~  171 (568)
                      .+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++........... ....++.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~  160 (252)
T cd05084          81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQIPV  160 (252)
T ss_pred             HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCCce
Confidence            9999764 4689999999999999999999999999999999999999999999999999875432211110 1112345


Q ss_pred             cccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCChHHHHHHHHccccCcCC
Q psy6203         172 NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQVEPGK  249 (568)
Q Consensus       172 ~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~li~~~L~~dP~~  249 (568)
                      .|+|||.+.+.. ++.++|||||||++|+|++ |..||...+.......+..+ ....+...+..+.+++.+||+.||++
T Consensus       161 ~y~aPE~~~~~~-~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  239 (252)
T cd05084         161 KWTAPEALNYGR-YSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELCPDAVYRLMERCWEYDPGQ  239 (252)
T ss_pred             eecCchhhcCCC-CChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccCCHHHHHHHHHHcCCChhh
Confidence            699999998766 5889999999999999998 99999877766666666554 33445567899999999999999999


Q ss_pred             CCCHHHHhc
Q psy6203         250 RIKIQDLLG  258 (568)
Q Consensus       250 Rps~~ell~  258 (568)
                      |||+.+++.
T Consensus       240 Rps~~~~~~  248 (252)
T cd05084         240 RPSFSTVHQ  248 (252)
T ss_pred             CcCHHHHHH
Confidence            999999974


No 243
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00  E-value=8.8e-41  Score=342.64  Aligned_cols=260  Identities=27%  Similarity=0.426  Sum_probs=215.3

Q ss_pred             ccccCeEE-EeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCc-------------hHHHHHHHHHHHhCCCCCcce
Q psy6203           5 DLRNQYIL-ERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-------------LPRVKLEINALKHISHQHICK   70 (568)
Q Consensus         5 ~~~~~Y~i-~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-------------~~~~~~Ei~~l~~l~hpnIv~   70 (568)
                      ++.++|.. .+.||+|+||+||+|.+..+++.||+|++........             ...+.+|+.++++++||||++
T Consensus         5 ~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~   84 (335)
T PTZ00024          5 SISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMG   84 (335)
T ss_pred             ccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceee
Confidence            56778865 5779999999999999999999999999875433221             124678999999999999999


Q ss_pred             eeEEEEeCCEEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEee
Q psy6203          71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDF  150 (568)
Q Consensus        71 l~~~~~~~~~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DF  150 (568)
                      +++++...+..++||||+. |+|.+++.....+++..+..++.|++.||+|||+.||+||||+|+||+++.++.++|+||
T Consensus        85 ~~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~df  163 (335)
T PTZ00024         85 LVDVYVEGDFINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADF  163 (335)
T ss_pred             eeEEEecCCcEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCc
Confidence            9999999999999999996 689999988888999999999999999999999999999999999999999999999999


Q ss_pred             cCccCCCCC-------------CccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHH
Q psy6203         151 GLCAKPEGG-------------LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLY  217 (568)
Q Consensus       151 G~a~~~~~~-------------~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~  217 (568)
                      |++......             .........+++.|+|||.+.+...++.++|||||||++|+|++|.+||.+.+..+..
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~  243 (335)
T PTZ00024        164 GLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQL  243 (335)
T ss_pred             cceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            998654311             0111223356889999999987665688999999999999999999999887765554


Q ss_pred             HHHHcCC--CC--------------------------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCcccccC
Q psy6203         218 DKILNGK--YT--------------------------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       218 ~~i~~~~--~~--------------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                      ..+....  ..                          .....+..+.++|.+||+.||++|||++|++.||||+..
T Consensus       244 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~  319 (335)
T PTZ00024        244 GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD  319 (335)
T ss_pred             HHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence            4432210  00                          012347789999999999999999999999999999843


No 244
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00  E-value=6.8e-41  Score=340.63  Aligned_cols=250  Identities=26%  Similarity=0.425  Sum_probs=209.9

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcE----EEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEK----VAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFM   83 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l   83 (568)
                      ++|++.+.||+|+||.||+|.+..+++.    ||+|+++..........+..|+.+++.++||||+++++++... ..++
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~   85 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL   85 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence            5799999999999999999998766654    8999987543333456788899999999999999999998764 5689


Q ss_pred             EEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc
Q psy6203          84 VIEYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES  162 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  162 (568)
                      |+||+++|+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.........
T Consensus        86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  165 (316)
T cd05108          86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKE  165 (316)
T ss_pred             eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCcc
Confidence            99999999999999874 46889999999999999999999999999999999999999999999999998865432211


Q ss_pred             -ccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCChHHHHHH
Q psy6203         163 -QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQIV  239 (568)
Q Consensus       163 -~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li  239 (568)
                       ......++..|+|||.+.+.. ++.++|||||||++|+|++ |..||.+.+..++...+..+. .+.++..+.++.+++
T Consensus       166 ~~~~~~~~~~~y~apE~~~~~~-~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  244 (316)
T cd05108         166 YHAEGGKVPIKWMALESILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICTIDVYMIM  244 (316)
T ss_pred             eeccCCccceeecChHHhccCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHHH
Confidence             112223467899999998766 5899999999999999997 999998887776655554443 344566788999999


Q ss_pred             HHccccCcCCCCCHHHHhcC
Q psy6203         240 RSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       240 ~~~L~~dP~~Rps~~ell~h  259 (568)
                      .+||..||.+|||+.+++.+
T Consensus       245 ~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         245 VKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             HHHccCChhhCcCHHHHHHH
Confidence            99999999999999999986


No 245
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00  E-value=4.1e-41  Score=339.12  Aligned_cols=256  Identities=29%  Similarity=0.508  Sum_probs=217.8

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ....|.....||+|+||.||+|.+..+++.||+|++..... .....+.+|+.+++.++||||+++++++...+..|+||
T Consensus        19 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~   97 (297)
T cd06659          19 PRSLLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ-QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLM   97 (297)
T ss_pred             chhhHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc-chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEE
Confidence            34556677789999999999999999999999999875432 23456788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      ||+++++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++....... ....
T Consensus        98 e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~-~~~~  175 (297)
T cd06659          98 EFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV-PKRK  175 (297)
T ss_pred             ecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhccccc-cccc
Confidence            99999999887644 578999999999999999999999999999999999999999999999999986543321 1223


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC---CCCCCCChHHHHHHHHc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY---TEPPWMSPNSRQIVRSM  242 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~li~~~  242 (568)
                      ..+|+..|+|||++.+.. ++.++|||||||++|+|++|+.||...+..+....+.....   ......++.+.++|.+|
T Consensus       176 ~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~  254 (297)
T cd06659         176 SLVGTPYWMAPEVISRTP-YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERM  254 (297)
T ss_pred             ceecCccccCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHH
Confidence            456899999999998766 58899999999999999999999987776666655544322   22335788999999999


Q ss_pred             cccCcCCCCCHHHHhcCcccccC
Q psy6203         243 LQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       243 L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                      |+.+|.+||+++++++||||...
T Consensus       255 l~~~P~~Rps~~~ll~~~~~~~~  277 (297)
T cd06659         255 LTREPQERATAQELLDHPFLLQT  277 (297)
T ss_pred             hcCCcccCcCHHHHhhChhhccC
Confidence            99999999999999999999843


No 246
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological 
Probab=100.00  E-value=9.1e-41  Score=332.81  Aligned_cols=252  Identities=21%  Similarity=0.327  Sum_probs=213.8

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCC-----CcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLT-----GEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSH   80 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~   80 (568)
                      ..++|++.+.||+|+||.||+|.+...     +..||+|.+...........+.+|+.+++.++||||+++++++.....
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~   83 (277)
T cd05032           4 PREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQP   83 (277)
T ss_pred             chHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCC
Confidence            467899999999999999999988644     378999998654332334567889999999999999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhc----------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEee
Q psy6203          81 IFMVIEYCPGGELLDHIVER----------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDF  150 (568)
Q Consensus        81 ~~lV~E~~~~g~L~~~i~~~----------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DF  150 (568)
                      .++||||+++++|.+++...          ..+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+||
T Consensus        84 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~df  163 (277)
T cd05032          84 TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDF  163 (277)
T ss_pred             cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCc
Confidence            99999999999999998653          23678899999999999999999999999999999999999999999999


Q ss_pred             cCccCCCCCCc-cccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCC
Q psy6203         151 GLCAKPEGGLE-SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTE  227 (568)
Q Consensus       151 G~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~  227 (568)
                      |+++....... .......++..|+|||.+.+.. ++.++|||||||++|++++ |..||...+..+....+..+. ...
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~  242 (277)
T cd05032         164 GMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV-FTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDL  242 (277)
T ss_pred             ccchhhccCcccccCCCCCccccccCHHHHhcCC-CCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCCCC
Confidence            99875432211 1223345678999999987665 5889999999999999998 999999888888777776553 345


Q ss_pred             CCCCChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         228 PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       228 ~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      +...+..+.+++.+||+.+|++|||+.++++
T Consensus       243 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         243 PENCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            6667899999999999999999999999985


No 247
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly 
Probab=100.00  E-value=8.8e-41  Score=335.17  Aligned_cols=250  Identities=26%  Similarity=0.416  Sum_probs=212.4

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEc-----CCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHV-----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHI   81 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~   81 (568)
                      +++|.+.+.||+|+||+||++.+.     .++..+|+|.+.... ......+.+|+.++++++||||+++++++...+..
T Consensus         4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   82 (288)
T cd05093           4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPL   82 (288)
T ss_pred             hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence            468999999999999999999863     345678999886543 22345688899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcC-------------CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEE
Q psy6203          82 FMVIEYCPGGELLDHIVERQ-------------RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLI  148 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~~-------------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~  148 (568)
                      ++||||+++++|.+++...+             .+++..+..++.||+.||+|||++|++||||||+||+++.++.+||+
T Consensus        83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~  162 (288)
T cd05093          83 IMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIG  162 (288)
T ss_pred             EEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEec
Confidence            99999999999999997543             48999999999999999999999999999999999999999999999


Q ss_pred             eecCccCCCCCCc-cccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCC
Q psy6203         149 DFGLCAKPEGGLE-SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYT  226 (568)
Q Consensus       149 DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~~  226 (568)
                      |||++........ .......+++.|+|||++.+.. ++.++|||||||++|+|++ |..||...+.......+..+...
T Consensus       163 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~  241 (288)
T cd05093         163 DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK-FTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVL  241 (288)
T ss_pred             cCCccccccCCceeecCCCCCccccccCHHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcC
Confidence            9999875433211 1112334577899999998765 5889999999999999998 99999888888888888877643


Q ss_pred             -CCCCCChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         227 -EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       227 -~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                       .+...++++.+|+.+||+.||.+|||+.+++.
T Consensus       242 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         242 QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence             44567899999999999999999999999854


No 248
>KOG0983|consensus
Probab=100.00  E-value=5.7e-42  Score=316.06  Aligned_cols=254  Identities=28%  Similarity=0.398  Sum_probs=213.4

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEEEEEEe
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      |+.+++..||.|+.|+|++++.+.+|...|||.+.+....+..+++...+.++... ++|.||+.+++|..+..+++.||
T Consensus        92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe  171 (391)
T KOG0983|consen   92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME  171 (391)
T ss_pred             HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence            34456778999999999999999999999999999887767777888888876655 48999999999999999999999


Q ss_pred             ccCCCChHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHH-cCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          87 YCPGGELLDHIV-ERQRLGEKESRAFFRQILSAVAYLHH-LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        87 ~~~~g~L~~~i~-~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      .+. ..+..++. -.++++|..+-++...+++||.||.+ +||+|||+||+|||+|..|++||||||++.......  ..
T Consensus       172 lMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk--Ah  248 (391)
T KOG0983|consen  172 LMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK--AH  248 (391)
T ss_pred             HHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeeccc--cc
Confidence            983 33444443 25789999999999999999999975 589999999999999999999999999987765432  23


Q ss_pred             ccccCCccccccccccC--cccCCcccceechhhHHHHHHhCCCCCCCCC-HHHHHHHHHcCCCCCC---CCCChHHHHH
Q psy6203         165 QTSCGSPNYAAPEVIKG--KQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKILNGKYTEP---PWMSPNSRQI  238 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlG~il~~lltG~~pf~~~~-~~~~~~~i~~~~~~~~---~~~~~~~~~l  238 (568)
                      ....|.+.|||||.+.-  .+.|+-.+||||||++++||+||..||.+.+ .-+++..+.+..++..   ..+|+.+++|
T Consensus       249 trsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~f  328 (391)
T KOG0983|consen  249 TRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSF  328 (391)
T ss_pred             ccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHH
Confidence            44568999999999853  3457889999999999999999999998843 4466677777555432   2389999999


Q ss_pred             HHHccccCcCCCCCHHHHhcCccccc
Q psy6203         239 VRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       239 i~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      +..||++|+.+||...++|+|||++.
T Consensus       329 v~~CL~kd~r~RP~Y~~Ll~h~Fi~~  354 (391)
T KOG0983|consen  329 VKDCLTKDHRKRPKYNKLLEHPFIKR  354 (391)
T ss_pred             HHHHhhcCcccCcchHHHhcCcceee
Confidence            99999999999999999999999983


No 249
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00  E-value=1.7e-40  Score=336.28  Aligned_cols=255  Identities=29%  Similarity=0.375  Sum_probs=214.6

Q ss_pred             cccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEE
Q psy6203           4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHI   81 (568)
Q Consensus         4 ~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~   81 (568)
                      .+...+|.+.+.||+|+||+||+|.+..+|+.||+|++......  +....+.+|+.+++.++||||+++++++.+.+..
T Consensus        11 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~   90 (307)
T cd06607          11 DDPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTA   90 (307)
T ss_pred             CCcchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeE
Confidence            45677899999999999999999999999999999998654322  2235678899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC
Q psy6203          82 FMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL  160 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  160 (568)
                      |+||||+. |+|.+.+.. ...+++..+..++.||+.||.|||+.||+||||+|+||+++.++.++|+|||++...... 
T Consensus        91 ~lv~e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~-  168 (307)
T cd06607          91 WLVMEYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA-  168 (307)
T ss_pred             EEEHHhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC-
Confidence            99999996 577777654 467999999999999999999999999999999999999999999999999998654322 


Q ss_pred             ccccccccCCccccccccccC--cccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-C-CCCCChHHH
Q psy6203         161 ESQLQTSCGSPNYAAPEVIKG--KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-E-PPWMSPNSR  236 (568)
Q Consensus       161 ~~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~-~-~~~~~~~~~  236 (568)
                          ....+++.|+|||++.+  ...++.++||||||+++|+|++|..||...+.......+...... . +...+..+.
T Consensus       169 ----~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (307)
T cd06607         169 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFR  244 (307)
T ss_pred             ----CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHH
Confidence                23467889999999852  234688999999999999999999999877765554444433222 1 223678899


Q ss_pred             HHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         237 QIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       237 ~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      ++|.+||+.||++||++.+++.||||..
T Consensus       245 ~li~~~l~~~p~~Rp~~~~il~~~~~~~  272 (307)
T cd06607         245 NFVDSCLQKIPQDRPSSEELLKHRFVLR  272 (307)
T ss_pred             HHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence            9999999999999999999999999984


No 250
>KOG0596|consensus
Probab=100.00  E-value=7.6e-42  Score=342.53  Aligned_cols=254  Identities=27%  Similarity=0.432  Sum_probs=204.2

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCc-CCchHHHHHHHHHHHhCC-CCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL-GEDLPRVKLEINALKHIS-HQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ..|++++.||+||.+.||++..- ..+.||+|.+..... ......+.+|+..|.+|+ |.+||+++++-..++.+|+||
T Consensus       361 ~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm  439 (677)
T KOG0596|consen  361 REYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM  439 (677)
T ss_pred             chhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence            46999999999999999999864 445677765543322 234667899999999996 999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc-
Q psy6203          86 EYCPGGELLDHIVERQRL-GEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ-  163 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l-~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~-  163 (568)
                      ||= ..+|...+.++... +.-.++.+..|++.|+.++|..||||.||||.|+|+ -.|.+||+|||+|.....+.... 
T Consensus       440 E~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl-VkG~LKLIDFGIA~aI~~DTTsI~  517 (677)
T KOG0596|consen  440 ECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL-VKGRLKLIDFGIANAIQPDTTSIV  517 (677)
T ss_pred             ecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE-EeeeEEeeeechhcccCcccccee
Confidence            986 57999999876553 335888999999999999999999999999999999 46889999999998776543332 


Q ss_pred             cccccCCccccccccccCcc----------cCCcccceechhhHHHHHHhCCCCCCCCC-HHHHHHHHHcCC--CCCCCC
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQ----------YYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKILNGK--YTEPPW  230 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~----------~~~~~~DiwSlG~il~~lltG~~pf~~~~-~~~~~~~i~~~~--~~~~~~  230 (568)
                      ..+.+||+.|||||.+....          ..+.++||||||||||+|+.|+.||..-. ...-+..|....  .+++..
T Consensus       518 kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~  597 (677)
T KOG0596|consen  518 KDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDI  597 (677)
T ss_pred             eccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCC
Confidence            24568999999999985432          14678999999999999999999996532 333344444432  234443


Q ss_pred             CChH-HHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         231 MSPN-SRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       231 ~~~~-~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      -+.. +.++++.||..||.+|||+.++|+|||+..
T Consensus       598 ~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  598 PENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             CCchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence            3333 999999999999999999999999999984


No 251
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00  E-value=9.3e-41  Score=334.15  Aligned_cols=252  Identities=27%  Similarity=0.447  Sum_probs=211.3

Q ss_pred             eEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeC--CEEEEEEe
Q psy6203          10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETS--SHIFMVIE   86 (568)
Q Consensus        10 Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~--~~~~lV~E   86 (568)
                      |++.+.||+|++|.||+|.+..+|+.+|+|.+...... .....+.+|+.+++.++|||++++++++...  +..++|||
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e   80 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE   80 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence            78999999999999999999999999999999876422 2334677899999999999999999999888  89999999


Q ss_pred             ccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          87 YCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        87 ~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      |++ ++|.+++... ..+++..+..++.||+.||+|||+.|++|+||+|+||+++.++.+||+|||++............
T Consensus        81 ~~~-~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~  159 (287)
T cd07840          81 YMD-HDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYT  159 (287)
T ss_pred             ccc-ccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCccccc
Confidence            996 4888888765 57999999999999999999999999999999999999999999999999998765443222223


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-------------------
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-------------------  226 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~-------------------  226 (568)
                      ...++..|+|||.+.+...++.++||||||+++|+|++|+.||...+.......+......                   
T Consensus       160 ~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (287)
T cd07840         160 NRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLK  239 (287)
T ss_pred             ccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhcc
Confidence            3457889999998876655789999999999999999999999887765544444321000                   


Q ss_pred             -----------CCCC-CChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         227 -----------EPPW-MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       227 -----------~~~~-~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                                 .... .++.+.+++.+||+.||.+||++.+++.||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         240 PKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             ccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence                       0011 37889999999999999999999999999997


No 252
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00  E-value=3.5e-41  Score=344.87  Aligned_cols=255  Identities=30%  Similarity=0.458  Sum_probs=216.7

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCc-CCchHHHHHHHHHHHhCCCCCcceeeEEEEeCC-----EEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL-GEDLPRVKLEINALKHISHQHICKLFQVIETSS-----HIF   82 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~-----~~~   82 (568)
                      +|++.+.||+|++|.||+|.+..+|+.||+|.+..... ....+.+.+|+.+++.++||||+++++++...+     .+|
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~   80 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY   80 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence            69999999999999999999998999999999876432 234567888999999999999999999987765     789


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc-
Q psy6203          83 MVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE-  161 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-  161 (568)
                      +||||++ ++|.+.+.....+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++........ 
T Consensus        81 lv~e~~~-~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~  159 (330)
T cd07834          81 IVTELME-TDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE  159 (330)
T ss_pred             EEecchh-hhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccc
Confidence            9999996 58999998878899999999999999999999999999999999999999999999999999876544321 


Q ss_pred             -cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC--C------------
Q psy6203         162 -SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY--T------------  226 (568)
Q Consensus       162 -~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~--~------------  226 (568)
                       .......+++.|+|||.+.+...++.++|+||||+++|+|++|.+||.+.+..+....+.....  .            
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~  239 (330)
T cd07834         160 KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKA  239 (330)
T ss_pred             cccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccch
Confidence             1233446789999999998874578999999999999999999999988776655554433110  0            


Q ss_pred             -----------------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         227 -----------------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       227 -----------------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                                       ..+.+++.+.++|.+||+.||++|||+++++.||||+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~  294 (330)
T cd07834         240 RNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQ  294 (330)
T ss_pred             hhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHh
Confidence                             01235788999999999999999999999999999984


No 253
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00  E-value=1.4e-40  Score=330.07  Aligned_cols=252  Identities=25%  Similarity=0.396  Sum_probs=207.6

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEecc
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYC   88 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~   88 (568)
                      .......||+|+||.||+|.+..++..||+|.+..... .....+.+|+.++++++|+||+++++++...+..++||||+
T Consensus         9 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   87 (268)
T cd06624           9 ENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS-RYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQV   87 (268)
T ss_pred             cCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCH-HHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecC
Confidence            33445689999999999999999999999998875432 23457889999999999999999999999999999999999


Q ss_pred             CCCChHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcC-CCCeEEEeecCccCCCCCCcccc
Q psy6203          89 PGGELLDHIVER-QRL--GEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-NQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        89 ~~g~L~~~i~~~-~~l--~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~-~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      ++++|.+++... ..+  ++..+..++.||+.||.|||++||+||||||+||+++. ++.++|+|||++...... ....
T Consensus        88 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~-~~~~  166 (268)
T cd06624          88 PGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI-NPCT  166 (268)
T ss_pred             CCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccC-CCcc
Confidence            999999999764 455  88889999999999999999999999999999999976 678999999998754322 1222


Q ss_pred             ccccCCccccccccccCcc-cCCcccceechhhHHHHHHhCCCCCCCCCHH--HHHHH-HHcCCCCCCCCCChHHHHHHH
Q psy6203         165 QTSCGSPNYAAPEVIKGKQ-YYGSETDVWSMGVMLYALLCGFLPFDSDSID--QLYDK-ILNGKYTEPPWMSPNSRQIVR  240 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~-~~~~~~DiwSlG~il~~lltG~~pf~~~~~~--~~~~~-i~~~~~~~~~~~~~~~~~li~  240 (568)
                      ....|++.|+|||++.+.. .++.++|+||+|+++|+|++|..||......  ..... ........+..+++++.+++.
T Consensus       167 ~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  246 (268)
T cd06624         167 ETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFIL  246 (268)
T ss_pred             ccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHH
Confidence            3345889999999986532 3578999999999999999999999654321  11111 122233455668899999999


Q ss_pred             HccccCcCCCCCHHHHhcCccc
Q psy6203         241 SMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       241 ~~L~~dP~~Rps~~ell~hp~~  262 (568)
                      +||+.+|.+|||+.|++.||||
T Consensus       247 ~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         247 RCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             HHcCCCchhCCCHHHHHhCCCC
Confidence            9999999999999999999997


No 254
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs),  (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast 
Probab=100.00  E-value=2.7e-40  Score=324.54  Aligned_cols=252  Identities=30%  Similarity=0.500  Sum_probs=220.3

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      +|++.+.||+|++|.||++.+..+++.||+|.+...... .....+.+|++++++++|||++++++++.+.+..++||||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY   80 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence            589999999999999999999999999999999866432 2356788999999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccc
Q psy6203          88 CPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS  167 (568)
Q Consensus        88 ~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~  167 (568)
                      +++++|.+++.....+++..+..++.|++.||.+||+.||+||||+|+||+++.++.++|+|||++........ .....
T Consensus        81 ~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-~~~~~  159 (254)
T cd06627          81 AENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSK-DDASV  159 (254)
T ss_pred             CCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcc-ccccc
Confidence            99999999998888899999999999999999999999999999999999999999999999999886654322 12345


Q ss_pred             cCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHH-cCCCCCCCCCChHHHHHHHHccccC
Q psy6203         168 CGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL-NGKYTEPPWMSPNSRQIVRSMLQVE  246 (568)
Q Consensus       168 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~li~~~L~~d  246 (568)
                      .++..|+|||.+.+.. ++.++||||+|+++|+|++|..||...+.......+. ......+..+++.+.+++.+||..+
T Consensus       160 ~~~~~y~~pe~~~~~~-~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~  238 (254)
T cd06627         160 VGTPYWMAPEVIEMSG-ASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLPEGISPELKDFLMQCFQKD  238 (254)
T ss_pred             ccchhhcCHhhhcCCC-CCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHHhCC
Confidence            6889999999987766 6889999999999999999999997665444333333 3444556678899999999999999


Q ss_pred             cCCCCCHHHHhcCccc
Q psy6203         247 PGKRIKIQDLLGHNWV  262 (568)
Q Consensus       247 P~~Rps~~ell~hp~~  262 (568)
                      |++|||+.+++.||||
T Consensus       239 p~~R~~~~~~l~~~~~  254 (254)
T cd06627         239 PNLRPTAKQLLKHPWI  254 (254)
T ss_pred             hhhCcCHHHHhcCCCC
Confidence            9999999999999997


No 255
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00  E-value=2.1e-40  Score=327.45  Aligned_cols=249  Identities=25%  Similarity=0.374  Sum_probs=211.6

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ..++|++.+.||+|++|.||+|.+. +++.||+|.++....  ....+.+|+.++++++||||+++++++...+..++||
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (261)
T cd05068           4 DRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM--DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT   80 (261)
T ss_pred             chhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc--cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence            3578999999999999999999975 457899999875432  3456888999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          86 EYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      ||+++++|.+++....  .+++..+..++.|++.||.+||++||+||||||+||+++.++.+||+|||++..........
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~  160 (261)
T cd05068          81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEA  160 (261)
T ss_pred             ecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccc
Confidence            9999999999997654  68999999999999999999999999999999999999999999999999987654321111


Q ss_pred             cccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCChHHHHHHHH
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQIVRS  241 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~  241 (568)
                      ......+..|+|||.+.+.. ++.++||||||+++|+|++ |+.||.+.+.......+.... .+.+...+..+.+++.+
T Consensus       161 ~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  239 (261)
T cd05068         161 REGAKFPIKWTAPEAALYNR-FSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPPGCPKELYDIMLD  239 (261)
T ss_pred             cCCCcCceeccCccccccCC-CCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHH
Confidence            11122345799999987765 5889999999999999999 999999888777777776542 33455678999999999


Q ss_pred             ccccCcCCCCCHHHHhc
Q psy6203         242 MLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       242 ~L~~dP~~Rps~~ell~  258 (568)
                      ||+.+|++||++++++.
T Consensus       240 ~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         240 CWKEDPDDRPTFETLQW  256 (261)
T ss_pred             HhhcCcccCCCHHHHHH
Confidence            99999999999999874


No 256
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00  E-value=7.5e-41  Score=337.81  Aligned_cols=256  Identities=24%  Similarity=0.421  Sum_probs=210.3

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCC-----
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSS-----   79 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~-----   79 (568)
                      ..++|++.+.||+|+||.||+|.++.+|+.||+|+++..... .....+.+|+.++++++||||+++++++.+..     
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~   84 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF   84 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence            457899999999999999999999999999999998754322 22346678999999999999999999987654     


Q ss_pred             -----EEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCc
Q psy6203          80 -----HIFMVIEYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC  153 (568)
Q Consensus        80 -----~~~lV~E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a  153 (568)
                           .+++||||+++ ++.+.+... ..+++..+..++.||+.||.|||+.||+||||||+||+++.++.+||+|||++
T Consensus        85 ~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~  163 (302)
T cd07864          85 KKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLA  163 (302)
T ss_pred             cccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCccccc
Confidence                 78999999975 777777653 46899999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC---CC-----
Q psy6203         154 AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG---KY-----  225 (568)
Q Consensus       154 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~---~~-----  225 (568)
                      ...............++..|+|||.+.+...++.++|||||||++|+|++|++||...+..+....+...   ..     
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (302)
T cd07864         164 RLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWP  243 (302)
T ss_pred             ccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence            7654332222222346788999999876555688999999999999999999999876654444333221   00     


Q ss_pred             ----------------------CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         226 ----------------------TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       226 ----------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                                            .....+++.+.++|.+||+.||.+|||+.+++.||||
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         244 DVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             cccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence                                  0112367899999999999999999999999999997


No 257
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds 
Probab=100.00  E-value=1.1e-40  Score=328.62  Aligned_cols=248  Identities=25%  Similarity=0.411  Sum_probs=210.5

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      ++|++.+.||+|+||+||+|.... +..+|+|.+.....  ....+.+|+.++++++||||+++++++...+..++||||
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   80 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM--SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEY   80 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcc--cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEc
Confidence            579999999999999999998753 45699998875432  235688899999999999999999999988899999999


Q ss_pred             cCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          88 CPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        88 ~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      +.+++|.+++... ..+++..+..++.||+.||.|||+.|++|+||||+||+++.++.+||+|||.+.............
T Consensus        81 ~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~  160 (256)
T cd05113          81 MSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVG  160 (256)
T ss_pred             CCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCC
Confidence            9999999999764 468999999999999999999999999999999999999999999999999987543321111112


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCC-CCCCCChHHHHHHHHccc
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNSRQIVRSMLQ  244 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~li~~~L~  244 (568)
                      ..++..|+|||.+.+.. ++.++|||||||++|+|++ |..||...+.......+..+... .+...+..+.+++.+||+
T Consensus       161 ~~~~~~y~~pe~~~~~~-~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~  239 (256)
T cd05113         161 SKFPVRWSPPEVLLYSK-FSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRPHLASEKVYAIMYSCWH  239 (256)
T ss_pred             CccChhhCCHHHHhcCc-ccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcC
Confidence            23556899999998765 5889999999999999998 99999888877777777766443 344568899999999999


Q ss_pred             cCcCCCCCHHHHhcC
Q psy6203         245 VEPGKRIKIQDLLGH  259 (568)
Q Consensus       245 ~dP~~Rps~~ell~h  259 (568)
                      .||.+|||+.+++.+
T Consensus       240 ~~p~~Rp~~~~ll~~  254 (256)
T cd05113         240 EKAEERPTFQQLLSS  254 (256)
T ss_pred             CCcccCCCHHHHHHh
Confidence            999999999999864


No 258
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00  E-value=1e-40  Score=336.26  Aligned_cols=249  Identities=26%  Similarity=0.417  Sum_probs=209.6

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCc--EEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGE--KVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      ++|++.+.||+|+||.||+|....++.  .+++|.++..........+.+|+.+++++ +||||+++++++...+..|+|
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv   81 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA   81 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence            689999999999999999999877765  46888876433223345688899999999 799999999999999999999


Q ss_pred             EeccCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEE
Q psy6203          85 IEYCPGGELLDHIVERQ----------------RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLI  148 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~----------------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~  148 (568)
                      |||+++++|.+++....                .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+
T Consensus        82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~  161 (297)
T cd05089          82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIA  161 (297)
T ss_pred             EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEEC
Confidence            99999999999997542                47889999999999999999999999999999999999999999999


Q ss_pred             eecCccCCCCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-C
Q psy6203         149 DFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-T  226 (568)
Q Consensus       149 DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~  226 (568)
                      |||++.......  .......+..|+|||++.+.. ++.++|||||||++|+|++ |..||...+..+....+..+.. .
T Consensus       162 dfg~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~~  238 (297)
T cd05089         162 DFGLSRGEEVYV--KKTMGRLPVRWMAIESLNYSV-YTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRME  238 (297)
T ss_pred             CcCCCcccccee--ccCCCCcCccccCchhhccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCC
Confidence            999986432211  111122355799999987765 5889999999999999997 9999998888887777766533 3


Q ss_pred             CCCCCChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         227 EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       227 ~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      .+..+++.+.+|+.+||+.||.+|||++++++.
T Consensus       239 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         239 KPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            455688999999999999999999999999764


No 259
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, 
Probab=100.00  E-value=1.2e-40  Score=334.86  Aligned_cols=252  Identities=26%  Similarity=0.458  Sum_probs=212.9

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCC-----cEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTG-----EKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIETSSH   80 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~   80 (568)
                      .++|++.+.||+|+||.||++.+...+     ..+|+|.+...........+.+|+.+++++ +||||+++++++...+.
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~   90 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP   90 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence            478999999999999999999976443     689999987654333445678899999999 79999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCC
Q psy6203          81 IFMVIEYCPGGELLDHIVER----------------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQN  144 (568)
Q Consensus        81 ~~lV~E~~~~g~L~~~i~~~----------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~  144 (568)
                      +++||||+++|+|.+++...                ..+++..+..++.|++.||.|||++||+||||||+||+++.++.
T Consensus        91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~  170 (293)
T cd05053          91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHV  170 (293)
T ss_pred             eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCe
Confidence            99999999999999998642                45889999999999999999999999999999999999999999


Q ss_pred             eEEEeecCccCCCCCCcc-ccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHc
Q psy6203         145 LKLIDFGLCAKPEGGLES-QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILN  222 (568)
Q Consensus       145 ~kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~  222 (568)
                      +||+|||++......... ......++..|+|||++.+.. ++.++|||||||++|+|++ |..||.+.+..+....+..
T Consensus       171 ~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~  249 (293)
T cd05053         171 MKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKE  249 (293)
T ss_pred             EEeCccccccccccccceeccCCCCCCccccCHHHhccCC-cCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHc
Confidence            999999998764432111 111223456899999987665 5889999999999999997 9999998888887777766


Q ss_pred             CCC-CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         223 GKY-TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       223 ~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      +.. ..+...+..+.+|+.+||..||++|||+.|++++
T Consensus       250 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         250 GYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            543 3455678999999999999999999999999874


No 260
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00  E-value=9.1e-41  Score=338.25  Aligned_cols=253  Identities=25%  Similarity=0.447  Sum_probs=212.7

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcC-------CCcEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEe
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVL-------TGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIET   77 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~   77 (568)
                      ..++|.+.+.||+|+||.||+|.+..       ++..+|+|.+...........+..|+.+++.+ +||||+++++++..
T Consensus        16 ~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~   95 (307)
T cd05098          16 PRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ   95 (307)
T ss_pred             ehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec
Confidence            35789999999999999999998643       23569999987653333455678899999999 79999999999999


Q ss_pred             CCEEEEEEeccCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcC
Q psy6203          78 SSHIFMVIEYCPGGELLDHIVERQ----------------RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR  141 (568)
Q Consensus        78 ~~~~~lV~E~~~~g~L~~~i~~~~----------------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~  141 (568)
                      .+..|+||||+++|+|.+++....                .++..++..++.|++.||+|||++|++||||||+||+++.
T Consensus        96 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~  175 (307)
T cd05098          96 DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTE  175 (307)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcC
Confidence            999999999999999999997642                4788899999999999999999999999999999999999


Q ss_pred             CCCeEEEeecCccCCCCCCc-cccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHH
Q psy6203         142 NQNLKLIDFGLCAKPEGGLE-SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK  219 (568)
Q Consensus       142 ~~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~  219 (568)
                      ++.+||+|||.+........ .......+++.|+|||++.+.. ++.++|||||||++|+|++ |..||.+.+..++...
T Consensus       176 ~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~  254 (307)
T cd05098         176 DNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL  254 (307)
T ss_pred             CCcEEECCCcccccccccchhhccccCCCccceeChHHhccCC-CCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHH
Confidence            99999999999875432111 1111223456899999998765 5889999999999999998 8999998888887777


Q ss_pred             HHcCCC-CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         220 ILNGKY-TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       220 i~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      +..+.. ..+...+.++.+|+.+||..+|.+|||+.+++++
T Consensus       255 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         255 LKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             HHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            766643 4556688999999999999999999999999864


No 261
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the 
Probab=100.00  E-value=1.2e-40  Score=338.62  Aligned_cols=253  Identities=25%  Similarity=0.405  Sum_probs=204.7

Q ss_pred             CeEEEeeecccCCeEEEEEEEcC--CCcEEEEEEeecCCc--CCchHHHHHHHHHHHhCCCCCcceeeEEEEeC--CEEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVL--TGEKVAIKIMKKATL--GEDLPRVKLEINALKHISHQHICKLFQVIETS--SHIF   82 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~--~~~~vavK~~~~~~~--~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~--~~~~   82 (568)
                      +|++.+.||+|+||.||+|.+..  ++..||+|.+.....  ......+.+|+.+++.++||||+++++++.+.  +.++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   80 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY   80 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence            58999999999999999999988  899999999986431  12235677899999999999999999999888  8899


Q ss_pred             EEEeccCCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcC----CCCeEEEeecCc
Q psy6203          83 MVIEYCPGGELLDHIVER-----QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR----NQNLKLIDFGLC  153 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~----~~~~kl~DFG~a  153 (568)
                      +||||++ ++|.+.+...     ..+++..++.++.||+.||.|||+.+|+||||||+||+++.    ++.+||+|||++
T Consensus        81 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~  159 (316)
T cd07842          81 LLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLA  159 (316)
T ss_pred             EEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccc
Confidence            9999996 4777776432     36899999999999999999999999999999999999999    899999999998


Q ss_pred             cCCCCCCc--cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHH---------HHHHHHc
Q psy6203         154 AKPEGGLE--SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQ---------LYDKILN  222 (568)
Q Consensus       154 ~~~~~~~~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~---------~~~~i~~  222 (568)
                      ........  .......+++.|+|||++.+...++.++|||||||++|+|++|.+||.+.....         ....+..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (316)
T cd07842         160 RLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFE  239 (316)
T ss_pred             cccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHH
Confidence            76533221  122334678999999998776556889999999999999999999997543221         0000000


Q ss_pred             --------------------------CCCCCC-----------CCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         223 --------------------------GKYTEP-----------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       223 --------------------------~~~~~~-----------~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                                                .....+           ...+..+.++|.+||+.||++|||+.|++.||||
T Consensus       240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         240 VLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             HhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence                                      000011           1356788999999999999999999999999998


No 262
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis.  Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00  E-value=1.5e-40  Score=329.40  Aligned_cols=250  Identities=27%  Similarity=0.426  Sum_probs=210.6

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++.+.||+|+||.||+|++..+++.||+|.+......  .....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL   81 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence            6899999999999999999999999999999988754322  22345788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          86 EYCPGGELLDHIVE----RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        86 E~~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      ||+++++|.+++..    ...+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++....... 
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~-  160 (267)
T cd08228          82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT-  160 (267)
T ss_pred             EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh-
Confidence            99999999988853    3458999999999999999999999999999999999999999999999999987654321 


Q ss_pred             cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCC--HHHHHHHHHcCCCCC--CCCCChHHHH
Q psy6203         162 SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS--IDQLYDKILNGKYTE--PPWMSPNSRQ  237 (568)
Q Consensus       162 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~--~~~~~~~i~~~~~~~--~~~~~~~~~~  237 (568)
                      .......|++.|+|||.+.+.. ++.++|+||+|+++|+|++|..||....  .......+.....+.  ....+..+.+
T Consensus       161 ~~~~~~~~~~~~~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd08228         161 TAAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRE  239 (267)
T ss_pred             HHHhcCCCCccccChhhhccCC-CCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHH
Confidence            1223446889999999998766 5889999999999999999999996543  345555555444332  2246788999


Q ss_pred             HHHHccccCcCCCCCHHHHhcC
Q psy6203         238 IVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       238 li~~~L~~dP~~Rps~~ell~h  259 (568)
                      ++.+||+.+|++|||+.++++.
T Consensus       240 li~~cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         240 LVSMCIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             HHHHHCCCCcccCcCHHHHHHH
Confidence            9999999999999999999863


No 263
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00  E-value=1.1e-40  Score=348.12  Aligned_cols=253  Identities=27%  Similarity=0.447  Sum_probs=207.6

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCC-----CcEEEEEEeecCCcCCchHHHHHHHHHHHhCC-CCCcceeeEEEEeC
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLT-----GEKVAIKIMKKATLGEDLPRVKLEINALKHIS-HQHICKLFQVIETS   78 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~   78 (568)
                      --.++|++++.||+|+||.||+|.+...     +..||+|++.........+.+.+|+.++++++ ||||+++++++.+.
T Consensus        34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~  113 (400)
T cd05105          34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKS  113 (400)
T ss_pred             ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccC
Confidence            3467899999999999999999987533     34699999976543334567889999999996 99999999999999


Q ss_pred             CEEEEEEeccCCCChHHHHHhc----------------------------------------------------------
Q psy6203          79 SHIFMVIEYCPGGELLDHIVER----------------------------------------------------------  100 (568)
Q Consensus        79 ~~~~lV~E~~~~g~L~~~i~~~----------------------------------------------------------  100 (568)
                      +..|+|||||++|+|.+++..+                                                          
T Consensus       114 ~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  193 (400)
T cd05105         114 GPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLE  193 (400)
T ss_pred             CceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhh
Confidence            9999999999999999988642                                                          


Q ss_pred             --------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCC
Q psy6203         101 --------------------------------------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRN  142 (568)
Q Consensus       101 --------------------------------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~  142 (568)
                                                            ..+++..+..++.||+.||.|||+++|+||||||+|||++.+
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~  273 (400)
T cd05105         194 IKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQG  273 (400)
T ss_pred             hhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCC
Confidence                                                  136778889999999999999999999999999999999999


Q ss_pred             CCeEEEeecCccCCCCCCc-cccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHH-HHHHH
Q psy6203         143 QNLKLIDFGLCAKPEGGLE-SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSID-QLYDK  219 (568)
Q Consensus       143 ~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~-~~~~~  219 (568)
                      +.+||+|||++........ .......+++.|+|||++.+.. ++.++|||||||++|+|++ |..||...... .....
T Consensus       274 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~  352 (400)
T cd05105         274 KIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNL-YTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNK  352 (400)
T ss_pred             CEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHH
Confidence            9999999999875432211 1122335678899999998765 5899999999999999997 99999775443 33444


Q ss_pred             HHcC-CCCCCCCCChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         220 ILNG-KYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       220 i~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      +..+ ....+...+.++.+++.+||+.||++|||+.++.+
T Consensus       353 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         353 IKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             HhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence            4444 23345568899999999999999999999998865


No 264
>KOG4721|consensus
Probab=100.00  E-value=4.6e-42  Score=343.93  Aligned_cols=235  Identities=23%  Similarity=0.411  Sum_probs=204.6

Q ss_pred             EeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCCC
Q psy6203          13 ERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGE   92 (568)
Q Consensus        13 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g~   92 (568)
                      ++=||+|+.|-||+|+.  .++.||||.++..        -+.+|+.|++|+||||+.|.++|.....+|||||||..|.
T Consensus       129 LeWlGSGaQGAVF~Grl--~netVAVKKV~el--------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~Gq  198 (904)
T KOG4721|consen  129 LEWLGSGAQGAVFLGRL--HNETVAVKKVREL--------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQ  198 (904)
T ss_pred             hhhhccCcccceeeeec--cCceehhHHHhhh--------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeecccccc
Confidence            45589999999999985  5789999987532        2357899999999999999999999999999999999999


Q ss_pred             hHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCCcc
Q psy6203          93 LLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPN  172 (568)
Q Consensus        93 L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~  172 (568)
                      |...++....++......+..+|+.|++|||.+.|||||||.-||||..+..|||+|||-++.....  +....++||..
T Consensus       199 L~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~--STkMSFaGTVa  276 (904)
T KOG4721|consen  199 LYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDK--STKMSFAGTVA  276 (904)
T ss_pred             HHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhh--hhhhhhhhhHh
Confidence            9999999999999999999999999999999999999999999999999999999999988765432  45567899999


Q ss_pred             ccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCCCCCChHHHHHHHHccccCcCCC
Q psy6203         173 YAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--KYTEPPWMSPNSRQIVRSMLQVEPGKR  250 (568)
Q Consensus       173 y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R  250 (568)
                      |||||++.+.+ .+.|+|||||||+|||||||..||..-+...++--+-..  .++.|...++.++=||++||+-.|..|
T Consensus       277 WMAPEvIrneP-csEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNR  355 (904)
T KOG4721|consen  277 WMAPEVIRNEP-CSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNR  355 (904)
T ss_pred             hhCHHHhhcCC-cccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCC
Confidence            99999999887 599999999999999999999999755433322222111  345677788999999999999999999


Q ss_pred             CCHHHHhcCc
Q psy6203         251 IKIQDLLGHN  260 (568)
Q Consensus       251 ps~~ell~hp  260 (568)
                      |++.+||.|-
T Consensus       356 PSFrqil~Hl  365 (904)
T KOG4721|consen  356 PSFRQILLHL  365 (904)
T ss_pred             ccHHHHHHHH
Confidence            9999999983


No 265
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00  E-value=2.3e-40  Score=327.49  Aligned_cols=248  Identities=28%  Similarity=0.430  Sum_probs=208.6

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ..++|++.++||+|+||.||+|.+..+ ..||+|++.....  ....+.+|+.++++++||||+++++.+.. +..++||
T Consensus         4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~   79 (262)
T cd05071           4 PRESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM--SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT   79 (262)
T ss_pred             ChHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc--CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEE
Confidence            357899999999999999999988655 4699999875432  23568889999999999999999998754 5679999


Q ss_pred             eccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          86 EYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        86 E~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      ||+++|+|.+++...  ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||.+..........
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~  159 (262)
T cd05071          80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA  159 (262)
T ss_pred             EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccccc
Confidence            999999999999753  458899999999999999999999999999999999999999999999999987554322112


Q ss_pred             cccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCChHHHHHHHH
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQIVRS  241 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~  241 (568)
                      .....++..|+|||++.+.. ++.++|||||||++|+|++ |..||.+....+....+..+. ...+...+..+.+++.+
T Consensus       160 ~~~~~~~~~y~~PE~~~~~~-~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~  238 (262)
T cd05071         160 RQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ  238 (262)
T ss_pred             ccCCcccceecCHhHhccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCCCccccCHHHHHHHHH
Confidence            22334667899999987666 5889999999999999999 899998887777777766543 33445688999999999


Q ss_pred             ccccCcCCCCCHHHHhc
Q psy6203         242 MLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       242 ~L~~dP~~Rps~~ell~  258 (568)
                      ||+.||++|||+.++++
T Consensus       239 ~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         239 CWRKEPEERPTFEYLQA  255 (262)
T ss_pred             HccCCcccCCCHHHHHH
Confidence            99999999999999875


No 266
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00  E-value=2.2e-40  Score=331.86  Aligned_cols=256  Identities=31%  Similarity=0.495  Sum_probs=221.6

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      +..+.|++.+.||+|++|.||+|.+..++..||+|++.....  ....+..|+.+++.++|+||+++++.+...+..|+|
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   93 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV   93 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence            567789999999999999999999998999999999976543  455788899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          85 IEYCPGGELLDHIVERQ-RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      +||+++++|.+++.... .+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++....... ..
T Consensus        94 ~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~-~~  172 (286)
T cd06614          94 MEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK-SK  172 (286)
T ss_pred             EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch-hh
Confidence            99999999999998876 89999999999999999999999999999999999999999999999999876543321 12


Q ss_pred             cccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC---CCCCCChHHHHHHH
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT---EPPWMSPNSRQIVR  240 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~li~  240 (568)
                      .....++..|+|||.+.+.. ++.++|+|||||++|+|++|..||...+.......+......   .+..++..+.++|.
T Consensus       173 ~~~~~~~~~y~~PE~~~~~~-~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  251 (286)
T cd06614         173 RNSVVGTPYWMAPEVIKRKD-YGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLN  251 (286)
T ss_pred             hccccCCcccCCHhHhcCCC-CCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHH
Confidence            23345788999999988765 588999999999999999999999887766555555443322   22237889999999


Q ss_pred             HccccCcCCCCCHHHHhcCccccc
Q psy6203         241 SMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       241 ~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      +||+.+|.+|||+.+++.|+||+.
T Consensus       252 ~~l~~~p~~Rpt~~~il~~~~~~~  275 (286)
T cd06614         252 KCLVKDPEKRPSAEELLQHPFLKK  275 (286)
T ss_pred             HHhccChhhCcCHHHHhhChHhhc
Confidence            999999999999999999999984


No 267
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00  E-value=9.3e-41  Score=335.87  Aligned_cols=258  Identities=30%  Similarity=0.483  Sum_probs=217.2

Q ss_pred             cccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEE
Q psy6203           4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFM   83 (568)
Q Consensus         4 ~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l   83 (568)
                      .+..++|++.+.||+|+||.||++.+..++..||+|.+..... .....+.+|+.+++.++||||+++++++...+..|+
T Consensus        15 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~l   93 (293)
T cd06647          15 GDPKKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ-PKKELIINEILVMRENKHPNIVNYLDSYLVGDELWV   93 (293)
T ss_pred             cCchhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc-hHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEE
Confidence            3456899999999999999999999988999999999864332 234567889999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          84 VIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      |+||+++++|.+++.+ ..+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++....... ..
T Consensus        94 v~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~-~~  171 (293)
T cd06647          94 VMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-SK  171 (293)
T ss_pred             EEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccc-cc
Confidence            9999999999998865 458899999999999999999999999999999999999999999999999876544322 12


Q ss_pred             cccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc-CCC--CCCCCCChHHHHHHH
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN-GKY--TEPPWMSPNSRQIVR  240 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~-~~~--~~~~~~~~~~~~li~  240 (568)
                      .....|++.|+|||.+.+.. ++.++|+|||||++|++++|..||...+.......+.. +..  ..+..++..+.++|.
T Consensus       172 ~~~~~~~~~y~~PE~~~~~~-~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  250 (293)
T cd06647         172 RSTMVGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLN  250 (293)
T ss_pred             cccccCChhhcCchhhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHH
Confidence            23346889999999987765 58899999999999999999999987665433332222 222  223346788999999


Q ss_pred             HccccCcCCCCCHHHHhcCcccccC
Q psy6203         241 SMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       241 ~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                      +||..+|++||++.+++.|+||+..
T Consensus       251 ~~l~~~p~~Rp~~~~il~h~~~~~~  275 (293)
T cd06647         251 RCLEMDVEKRGSAKELLQHPFLKIA  275 (293)
T ss_pred             HHccCChhhCcCHHHHhcCHHHhcC
Confidence            9999999999999999999999843


No 268
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00  E-value=5.3e-41  Score=344.12  Aligned_cols=253  Identities=25%  Similarity=0.457  Sum_probs=205.6

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEc-----CCCcEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEe-C
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHV-----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIET-S   78 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~-~   78 (568)
                      ..++|++.+.||+|+||.||+|.+.     .+++.||+|++.........+.+..|+.++.++ +||||+++++++.. .
T Consensus         5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~   84 (337)
T cd05054           5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG   84 (337)
T ss_pred             CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence            3578999999999999999999754     345789999987543333345677899999999 79999999998764 4


Q ss_pred             CEEEEEEeccCCCChHHHHHhc----------------------------------------------------------
Q psy6203          79 SHIFMVIEYCPGGELLDHIVER----------------------------------------------------------  100 (568)
Q Consensus        79 ~~~~lV~E~~~~g~L~~~i~~~----------------------------------------------------------  100 (568)
                      ..++++|||+++++|.+++...                                                          
T Consensus        85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (337)
T cd05054          85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE  164 (337)
T ss_pred             CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence            5789999999999999998642                                                          


Q ss_pred             ---CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc-ccccccCCcccccc
Q psy6203         101 ---QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES-QLQTSCGSPNYAAP  176 (568)
Q Consensus       101 ---~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aP  176 (568)
                         ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++......... ......++..|+||
T Consensus       165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aP  244 (337)
T cd05054         165 LYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAP  244 (337)
T ss_pred             HhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCc
Confidence               25788999999999999999999999999999999999999999999999998764332111 12233456789999


Q ss_pred             ccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHH-HHHHHHcCCC-CCCCCCChHHHHHHHHccccCcCCCCCH
Q psy6203         177 EVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQ-LYDKILNGKY-TEPPWMSPNSRQIVRSMLQVEPGKRIKI  253 (568)
Q Consensus       177 E~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~-~~~~i~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~  253 (568)
                      |++.+.. ++.++|||||||++|+|++ |..||.+....+ ....+..+.. ..+...++++.+++.+||+.+|++||++
T Consensus       245 E~~~~~~-~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~  323 (337)
T cd05054         245 ESIFDKV-YTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTF  323 (337)
T ss_pred             HHhcCCC-CCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCH
Confidence            9998776 5899999999999999998 999997654333 3344444332 3345578899999999999999999999


Q ss_pred             HHHhcC
Q psy6203         254 QDLLGH  259 (568)
Q Consensus       254 ~ell~h  259 (568)
                      +|+++|
T Consensus       324 ~ell~~  329 (337)
T cd05054         324 SELVEI  329 (337)
T ss_pred             HHHHHH
Confidence            999875


No 269
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the 
Probab=100.00  E-value=2e-40  Score=324.99  Aligned_cols=245  Identities=39%  Similarity=0.720  Sum_probs=219.8

Q ss_pred             ecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCCCh
Q psy6203          16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGEL   93 (568)
Q Consensus        16 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g~L   93 (568)
                      ||+|+||.||++.+..+++.+|+|++.+.....  ....+..|+.++++++||||+++++.++.++..|+||||+++++|
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L   80 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL   80 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence            699999999999999899999999988764432  345788899999999999999999999999999999999999999


Q ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCCccc
Q psy6203          94 LDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNY  173 (568)
Q Consensus        94 ~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y  173 (568)
                      .+++.....+++..+..++.|++.||.|||+.+++|+||+|+||+++.++.++|+|||++....... .......++..|
T Consensus        81 ~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-~~~~~~~~~~~~  159 (250)
T cd05123          81 FSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-SRTNTFCGTPEY  159 (250)
T ss_pred             HHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-CcccCCcCCccc
Confidence            9999888889999999999999999999999999999999999999999999999999987654321 123345688899


Q ss_pred             cccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCCCCH
Q psy6203         174 AAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKI  253 (568)
Q Consensus       174 ~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~  253 (568)
                      +|||.+.+.. .+.++|+||||+++|++++|..||...+..+....+.......+...+..+.++|++||..||++||++
T Consensus       160 ~~Pe~~~~~~-~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~  238 (250)
T cd05123         160 LAPEVLLGKG-YGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEARDLISGLLQKDPTKRLGS  238 (250)
T ss_pred             cChHHhCCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhcCCHhhCCCc
Confidence            9999987765 588999999999999999999999888877778888877778888889999999999999999999999


Q ss_pred             ---HHHhcCccc
Q psy6203         254 ---QDLLGHNWV  262 (568)
Q Consensus       254 ---~ell~hp~~  262 (568)
                         +++++||||
T Consensus       239 ~~~~~l~~~~~f  250 (250)
T cd05123         239 GGAEEIKAHPFF  250 (250)
T ss_pred             ccHHHHHhCCCC
Confidence               999999998


No 270
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00  E-value=2e-40  Score=341.31  Aligned_cols=255  Identities=26%  Similarity=0.428  Sum_probs=209.9

Q ss_pred             cccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeC----
Q psy6203           4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETS----   78 (568)
Q Consensus         4 ~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~----   78 (568)
                      ..+.++|.+.+.||+|+||.||+|.+..+|+.||+|++.+.... .....+.+|+.++++++||||+++++++...    
T Consensus        13 ~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~   92 (345)
T cd07877          13 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLE   92 (345)
T ss_pred             hhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccc
Confidence            35678999999999999999999999999999999998754322 2245677899999999999999999988543    


Q ss_pred             --CEEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCC
Q psy6203          79 --SHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKP  156 (568)
Q Consensus        79 --~~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  156 (568)
                        ...|++++++ +++|.+.+.. ..+++..++.++.||+.||+|||++||+||||||+||+++.++.+||+|||++...
T Consensus        93 ~~~~~~lv~~~~-~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~  170 (345)
T cd07877          93 EFNDVYLVTHLM-GADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT  170 (345)
T ss_pred             ccccEEEEehhc-ccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccccc
Confidence              3478899887 7899887754 56999999999999999999999999999999999999999999999999998754


Q ss_pred             CCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-----------
Q psy6203         157 EGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY-----------  225 (568)
Q Consensus       157 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~-----------  225 (568)
                      ..    ......+++.|+|||.+.+...++.++|||||||++|+|++|..||...+.......+.....           
T Consensus       171 ~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (345)
T cd07877         171 DD----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS  246 (345)
T ss_pred             cc----cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcc
Confidence            32    223446789999999987755568899999999999999999999977654443332221100           


Q ss_pred             ------------CC--------CCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         226 ------------TE--------PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       226 ------------~~--------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                                  ..        ....++++.++|.+||+.||.+|||+.++++||||+.
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~  305 (345)
T cd07877         247 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ  305 (345)
T ss_pred             cHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhh
Confidence                        00        0125788999999999999999999999999999984


No 271
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00  E-value=2.7e-40  Score=325.80  Aligned_cols=245  Identities=25%  Similarity=0.444  Sum_probs=214.7

Q ss_pred             eeecccCCeEEEEEEEcCC---CcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          14 RTVGSGGFAKVKLATHVLT---GEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      +.||+|+||.||+|.+...   +..||+|++...........+..|+.+++.++|+||+++++++.+....++||||+++
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~   80 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG   80 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence            4799999999999999866   8899999998665444466788999999999999999999999999999999999999


Q ss_pred             CChHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          91 GELLDHIVER---------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        91 g~L~~~i~~~---------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      ++|.+++...         ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||.+........
T Consensus        81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~  160 (262)
T cd00192          81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY  160 (262)
T ss_pred             CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccc
Confidence            9999999875         7799999999999999999999999999999999999999999999999999876543211


Q ss_pred             -cccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCChHHHHH
Q psy6203         162 -SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQI  238 (568)
Q Consensus       162 -~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~l  238 (568)
                       .......+++.|+|||.+.+.. ++.++|||||||++|+|++ |..||...+..++.+.+..+. ...+..+++++.++
T Consensus       161 ~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  239 (262)
T cd00192         161 YRKKTGGKLPIRWMAPESLKDGI-FTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYRLPKPEYCPDELYEL  239 (262)
T ss_pred             cccccCCCcCccccCHHHhccCC-cchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCccCChHHHHH
Confidence             1223345788999999988765 6899999999999999999 699999988888888877653 34566789999999


Q ss_pred             HHHccccCcCCCCCHHHHhcC
Q psy6203         239 VRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       239 i~~~L~~dP~~Rps~~ell~h  259 (568)
                      +.+||+.||.+|||+.|++.+
T Consensus       240 i~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         240 MLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             HHHHccCCcccCcCHHHHHHh
Confidence            999999999999999999875


No 272
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00  E-value=7.7e-41  Score=335.43  Aligned_cols=254  Identities=24%  Similarity=0.386  Sum_probs=207.1

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCC-CCCcceeeEEEEeCCEEEEEEe
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS-HQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      ++|+..+.||+|+||.||++.+..+++.||+|.+...........+.+|+.++.++. ||||+++++++..++..+++||
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e   83 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME   83 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence            456778899999999999999999999999999876544444557788999999996 9999999999999999999999


Q ss_pred             ccCCCChHHHH---H--hcCCCCHHHHHHHHHHHHHHHHHHHHc-CceecCCCCCceEEcCCCCeEEEeecCccCCCCCC
Q psy6203          87 YCPGGELLDHI---V--ERQRLGEKESRAFFRQILSAVAYLHHL-GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL  160 (568)
Q Consensus        87 ~~~~g~L~~~i---~--~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  160 (568)
                      |+. +++.++.   .  ....+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus        84 ~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~  162 (288)
T cd06616          84 LMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI  162 (288)
T ss_pred             ccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC
Confidence            985 4554433   2  236799999999999999999999975 99999999999999999999999999987543321


Q ss_pred             ccccccccCCccccccccccCc--ccCCcccceechhhHHHHHHhCCCCCCCCCH-HHHHHHHHcCCCC-C----CCCCC
Q psy6203         161 ESQLQTSCGSPNYAAPEVIKGK--QYYGSETDVWSMGVMLYALLCGFLPFDSDSI-DQLYDKILNGKYT-E----PPWMS  232 (568)
Q Consensus       161 ~~~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiwSlG~il~~lltG~~pf~~~~~-~~~~~~i~~~~~~-~----~~~~~  232 (568)
                        ......|++.|+|||++.+.  ..++.++||||+||++|+|++|+.||..... .+....+..+..+ .    +..++
T Consensus       163 --~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (288)
T cd06616         163 --AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFS  240 (288)
T ss_pred             --ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccC
Confidence              11234688999999999766  3568899999999999999999999976542 1222233222221 1    12378


Q ss_pred             hHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         233 PNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       233 ~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      .++.+||.+||+.||++|||+++++.||||+.
T Consensus       241 ~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  272 (288)
T cd06616         241 PSFVNFINLCLIKDESKRPKYKELLEHPFIKD  272 (288)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence            89999999999999999999999999999974


No 273
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic 
Probab=100.00  E-value=1.6e-40  Score=336.72  Aligned_cols=255  Identities=24%  Similarity=0.401  Sum_probs=206.8

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC-chHHHHHHHHHHHhCCCCCcceeeEEEEeC-------
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQVIETS-------   78 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~-------   78 (568)
                      .++|++.+.||+|+||.||+|.+..+++.+|+|++......+ ....+.+|+.+++.++||||+++++++...       
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   86 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK   86 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence            579999999999999999999999999999999987554322 234567899999999999999999987443       


Q ss_pred             -CEEEEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCC
Q psy6203          79 -SHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKP  156 (568)
Q Consensus        79 -~~~~lV~E~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  156 (568)
                       ..+++||||+. ++|...+.. ...+++..+..++.||++||.|||++||+||||||+||+++.++.++|+|||++...
T Consensus        87 ~~~~~lv~~~~~-~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  165 (311)
T cd07866          87 RGSVYMVTPYMD-HDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPY  165 (311)
T ss_pred             CceEEEEEecCC-cCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhc
Confidence             35799999995 467776654 457999999999999999999999999999999999999999999999999998754


Q ss_pred             CCCCcc----------ccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-
Q psy6203         157 EGGLES----------QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY-  225 (568)
Q Consensus       157 ~~~~~~----------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~-  225 (568)
                      ......          ......+++.|+|||.+.+...++.++|||||||++|+|++|++||.+.+.....+.+..... 
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~  245 (311)
T cd07866         166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGT  245 (311)
T ss_pred             cCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCC
Confidence            322111          112235688899999987665568899999999999999999999987776554444322100 


Q ss_pred             ----------------------CCC-------CCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         226 ----------------------TEP-------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       226 ----------------------~~~-------~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                                            ..+       ...++.+.++|.+||+.||.+|||+.|++.||||
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         246 PTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             CChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence                                  000       1244678899999999999999999999999998


No 274
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core 
Probab=100.00  E-value=5.9e-40  Score=321.20  Aligned_cols=249  Identities=33%  Similarity=0.526  Sum_probs=215.2

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEecc
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYC   88 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~   88 (568)
                      +|++.+.||+|++|.||++.+..+++.+++|++..... .....+.+|+.+++.++||||+++++++...+..++++||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~   79 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFC   79 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecC
Confidence            58899999999999999999998999999999976543 34567889999999999999999999999999999999999


Q ss_pred             CCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccc
Q psy6203          89 PGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS  167 (568)
Q Consensus        89 ~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~  167 (568)
                      ++++|.+++... ..+++..+..++.|++.||.+||++|++||||+|+||+++.++.++|+|||.+........  ....
T Consensus        80 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--~~~~  157 (253)
T cd05122          80 SGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--RNTM  157 (253)
T ss_pred             CCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc--ccce
Confidence            999999998776 6899999999999999999999999999999999999999999999999999876554321  3445


Q ss_pred             cCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-CCC--CCCChHHHHHHHHccc
Q psy6203         168 CGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY-TEP--PWMSPNSRQIVRSMLQ  244 (568)
Q Consensus       168 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~-~~~--~~~~~~~~~li~~~L~  244 (568)
                      .++..|+|||.+.+.. ++.++|+||||+++|+|++|..||...+.......+..... ..+  ..++..+.++|.+||+
T Consensus       158 ~~~~~~~~PE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  236 (253)
T cd05122         158 VGTPYWMAPEVINGKP-YDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQ  236 (253)
T ss_pred             ecCCcccCHHHHcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHcc
Confidence            6889999999998766 58899999999999999999999987754444434333222 222  2237899999999999


Q ss_pred             cCcCCCCCHHHHhcCcc
Q psy6203         245 VEPGKRIKIQDLLGHNW  261 (568)
Q Consensus       245 ~dP~~Rps~~ell~hp~  261 (568)
                      .||++|||+.|++.|||
T Consensus       237 ~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         237 KNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             CChhhCCCHHHHhcCCC
Confidence            99999999999999998


No 275
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00  E-value=2.9e-40  Score=326.22  Aligned_cols=248  Identities=25%  Similarity=0.421  Sum_probs=209.1

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ..++|++.++||+|+||.||+|.+. .+..+|+|.+.....  ....+.+|+.++++++||||+++++++. .+..|+||
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~   79 (260)
T cd05070           4 PRESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM--SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVT   79 (260)
T ss_pred             chHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC--CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEE
Confidence            4578999999999999999999875 567799999876443  2356889999999999999999999885 45689999


Q ss_pred             eccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          86 EYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        86 E~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      ||+++++|.+++...  ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++..........
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~  159 (260)
T cd05070          80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTA  159 (260)
T ss_pred             EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCccccc
Confidence            999999999998763  458999999999999999999999999999999999999999999999999987644322111


Q ss_pred             cccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCChHHHHHHHH
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRS  241 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~li~~  241 (568)
                      .....++..|+|||.+.+.. ++.++||||||+++|+|++ |.+||.+.+..+....+..+ ..+.+...+..+.+|+.+
T Consensus       160 ~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  238 (260)
T cd05070         160 RQGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMPCPQDCPISLHELMLQ  238 (260)
T ss_pred             ccCCCCCccccChHHHhcCC-CcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHH
Confidence            22223566899999987665 5889999999999999999 89999888877777777654 334455678999999999


Q ss_pred             ccccCcCCCCCHHHHhc
Q psy6203         242 MLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       242 ~L~~dP~~Rps~~ell~  258 (568)
                      ||..||++|||++++.+
T Consensus       239 ~l~~~p~~Rpt~~~l~~  255 (260)
T cd05070         239 CWKKDPEERPTFEYLQS  255 (260)
T ss_pred             HcccCcccCcCHHHHHH
Confidence            99999999999999863


No 276
>KOG0614|consensus
Probab=100.00  E-value=6.8e-43  Score=346.01  Aligned_cols=253  Identities=32%  Similarity=0.587  Sum_probs=232.4

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      +.+++..||-|+||.|-++..+.....+|+|++++..+-+  ..+.+..|-.+|...+.|.||++|-.|.++.++|++||
T Consensus       421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE  500 (732)
T KOG0614|consen  421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME  500 (732)
T ss_pred             hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence            4567889999999999999977666669999999877643  35567889999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          87 YCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        87 ~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      -|-||+|+..++.++.|.+..++.++..+++|+.|||++|||.|||||+|++++.+|.+||.|||+|+....+  ...-+
T Consensus       501 aClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g--~KTwT  578 (732)
T KOG0614|consen  501 ACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG--RKTWT  578 (732)
T ss_pred             hhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccC--Cceee
Confidence            9999999999999999999999999999999999999999999999999999999999999999999987764  45678


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCCCCCChHHHHHHHHccc
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--KYTEPPWMSPNSRQIVRSMLQ  244 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~L~  244 (568)
                      +||||.|.|||++.+.. .+.++|.||||+++|||++|.+||.+.+....+..|+.|  ...+|..++..+.+||+++..
T Consensus       579 FcGTpEYVAPEIILnKG-HD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr  657 (732)
T KOG0614|consen  579 FCGTPEYVAPEIILNKG-HDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCR  657 (732)
T ss_pred             ecCCcccccchhhhccC-cchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHHh
Confidence            99999999999999877 489999999999999999999999999999999999988  456788899999999999999


Q ss_pred             cCcCCCCC-----HHHHhcCccccc
Q psy6203         245 VEPGKRIK-----IQDLLGHNWVKM  264 (568)
Q Consensus       245 ~dP~~Rps-----~~ell~hp~~~~  264 (568)
                      .+|.+|..     +.||-.|.||..
T Consensus       658 ~~P~ERLG~~~~gI~DIkkH~Wf~g  682 (732)
T KOG0614|consen  658 DNPTERLGYQKGGINDIKKHRWFEG  682 (732)
T ss_pred             cCcHhhhccccCChHHHHhhhhhhc
Confidence            99999986     899999999973


No 277
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00  E-value=2.7e-40  Score=327.80  Aligned_cols=250  Identities=26%  Similarity=0.401  Sum_probs=211.1

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCc---EEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGE---KVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      ++|++.+.||+|+||.||+|.+..++.   .+|+|.++..........+.+|+.++++++||||+++++++.+.+..|+|
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   83 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV   83 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence            579999999999999999999875543   69999887544333456788899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          85 IEYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      |||+++++|.+++... +.+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++..........
T Consensus        84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~  163 (267)
T cd05066          84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAA  163 (267)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccccccee
Confidence            9999999999999764 568999999999999999999999999999999999999999999999999987654322111


Q ss_pred             cc--cccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCChHHHHHH
Q psy6203         164 LQ--TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQIV  239 (568)
Q Consensus       164 ~~--~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li  239 (568)
                      ..  ...++..|+|||.+.+.. ++.++|+|||||++|++++ |..||...+..+....+..+. .+.+...++.+.+++
T Consensus       164 ~~~~~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  242 (267)
T cd05066         164 YTTRGGKIPIRWTAPEAIAYRK-FTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAPMDCPAALHQLM  242 (267)
T ss_pred             eecCCCccceeecCHhHhccCc-cCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCCCCCCHHHHHHH
Confidence            11  122356899999998765 5899999999999999886 999998877777777776653 233445788999999


Q ss_pred             HHccccCcCCCCCHHHHhc
Q psy6203         240 RSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       240 ~~~L~~dP~~Rps~~ell~  258 (568)
                      .+||+.+|.+|||+.++++
T Consensus       243 ~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         243 LDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             HHHcccCchhCCCHHHHHH
Confidence            9999999999999999875


No 278
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00  E-value=4e-40  Score=334.67  Aligned_cols=253  Identities=24%  Similarity=0.430  Sum_probs=211.9

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcC-------CCcEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVL-------TGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIE   76 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~   76 (568)
                      ...++|.+.+.||+|+||.||+|++..       .+..+|+|.+...........+..|+.+++++ +||||+++++++.
T Consensus         9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~   88 (314)
T cd05099           9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCT   88 (314)
T ss_pred             ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence            345789999999999999999998642       34579999987543333455678899999999 5999999999999


Q ss_pred             eCCEEEEEEeccCCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEc
Q psy6203          77 TSSHIFMVIEYCPGGELLDHIVER----------------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLD  140 (568)
Q Consensus        77 ~~~~~~lV~E~~~~g~L~~~i~~~----------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~  140 (568)
                      ..+..|+||||+++|+|.+++...                ..++...+..++.||+.||.|||++||+||||||+||+++
T Consensus        89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~  168 (314)
T cd05099          89 QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVT  168 (314)
T ss_pred             cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEc
Confidence            999999999999999999999753                2478889999999999999999999999999999999999


Q ss_pred             CCCCeEEEeecCccCCCCCCc-cccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHH
Q psy6203         141 RNQNLKLIDFGLCAKPEGGLE-SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYD  218 (568)
Q Consensus       141 ~~~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~  218 (568)
                      .++.+||+|||+++....... .......++..|+|||++.+.. ++.++|||||||++|+|++ |..||.+.+..+...
T Consensus       169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~  247 (314)
T cd05099         169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRV-YTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFK  247 (314)
T ss_pred             CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCC-cCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            999999999999876532211 1112223456899999998765 5889999999999999999 899999888888888


Q ss_pred             HHHcCCC-CCCCCCChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         219 KILNGKY-TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       219 ~i~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      .+..+.. ..+...+.++.+++.+||+.||++|||+.++++
T Consensus       248 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         248 LLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             HHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            7776643 345567889999999999999999999999886


No 279
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00  E-value=6.8e-41  Score=360.11  Aligned_cols=257  Identities=23%  Similarity=0.304  Sum_probs=195.2

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCC-cEEEEEEe--------------ecCC-c-CCchHHHHHHHHHHHhCCCCCc
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTG-EKVAIKIM--------------KKAT-L-GEDLPRVKLEINALKHISHQHI   68 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~-~~vavK~~--------------~~~~-~-~~~~~~~~~Ei~~l~~l~hpnI   68 (568)
                      +.++|++++.||+|+||+||+|..+... ...+.|.+              .+.. . ......+.+|+.+|++++||||
T Consensus       146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI  225 (501)
T PHA03210        146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI  225 (501)
T ss_pred             hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence            4578999999999999999998765432 22222211              1100 0 1123457889999999999999


Q ss_pred             ceeeEEEEeCCEEEEEEeccCCCChHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCC
Q psy6203          69 CKLFQVIETSSHIFMVIEYCPGGELLDHIVER-----QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQ  143 (568)
Q Consensus        69 v~l~~~~~~~~~~~lV~E~~~~g~L~~~i~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~  143 (568)
                      +++++++...+..|+|||++ +++|.+++...     .......++.++.||+.||.|||++||+||||||+|||++.++
T Consensus       226 v~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~  304 (501)
T PHA03210        226 LKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDG  304 (501)
T ss_pred             CcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC
Confidence            99999999999999999999 56787776542     2344677889999999999999999999999999999999999


Q ss_pred             CeEEEeecCccCCCCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCC-CCCC--C-HHHHHHH
Q psy6203         144 NLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLP-FDSD--S-IDQLYDK  219 (568)
Q Consensus       144 ~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~p-f~~~--~-~~~~~~~  219 (568)
                      .+||+|||++..............+||+.|+|||++.+.. ++.++|||||||++|+|++|..+ |...  . ..++.+.
T Consensus       305 ~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~  383 (501)
T PHA03210        305 KIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDG-YCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKI  383 (501)
T ss_pred             CEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCC-CCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHH
Confidence            9999999999765443222333467999999999998776 58999999999999999998754 4322  1 2222222


Q ss_pred             HHcC---------------------CCC-----C-----CCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         220 ILNG---------------------KYT-----E-----PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       220 i~~~---------------------~~~-----~-----~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      +...                     .+.     .     ...++.++.++|.+||++||.+|||+.|+|.||||..
T Consensus       384 ~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~  459 (501)
T PHA03210        384 IDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSA  459 (501)
T ss_pred             HHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhc
Confidence            1110                     000     0     0124567888999999999999999999999999974


No 280
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00  E-value=5.1e-40  Score=324.44  Aligned_cols=249  Identities=24%  Similarity=0.405  Sum_probs=210.6

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      -+.++|++.++||+|+||.||+|... +++.||+|.+.....  ....+.+|+.++++++||||+++++++. .+..++|
T Consensus         3 ~~~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v   78 (260)
T cd05067           3 VPRETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM--SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYII   78 (260)
T ss_pred             cchHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC--cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEE
Confidence            45789999999999999999999864 678899999875443  3457888999999999999999999874 4568999


Q ss_pred             EeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc
Q psy6203          85 IEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES  162 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  162 (568)
                      |||+++++|.+++...  ..+++.++..++.|++.||+|||+.|++||||||+||+++.++.++|+|||++.........
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05067          79 TEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcc
Confidence            9999999999998753  46899999999999999999999999999999999999999999999999998765422111


Q ss_pred             ccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCChHHHHHHH
Q psy6203         163 QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQIVR  240 (568)
Q Consensus       163 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~  240 (568)
                      ......++..|+|||++.+.. ++.++||||||+++|+|++ |++||.+.+..+....+..+. .+.+...+.++.+++.
T Consensus       159 ~~~~~~~~~~y~~pe~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  237 (260)
T cd05067         159 AREGAKFPIKWTAPEAINYGT-FTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMPRPDNCPEELYELMR  237 (260)
T ss_pred             cccCCcccccccCHHHhccCC-cCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCCCCCCCCHHHHHHHH
Confidence            222334567899999987665 5889999999999999999 999999888777777766553 2344557889999999


Q ss_pred             HccccCcCCCCCHHHHhc
Q psy6203         241 SMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       241 ~~L~~dP~~Rps~~ell~  258 (568)
                      +||+.+|++|||++++++
T Consensus       238 ~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         238 LCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             HHccCChhhCCCHHHHHH
Confidence            999999999999999875


No 281
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00  E-value=3.3e-40  Score=330.94  Aligned_cols=256  Identities=32%  Similarity=0.567  Sum_probs=216.2

Q ss_pred             CeEEEeeecccCCeEEEEEEEc---CCCcEEEEEEeecCCcC---CchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHV---LTGEKVAIKIMKKATLG---EDLPRVKLEINALKHI-SHQHICKLFQVIETSSHI   81 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~---~~~~~vavK~~~~~~~~---~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~   81 (568)
                      +|++.+.||+|++|.||++.+.   .+++.||+|++++....   .....+.+|+.++.++ +||||+++++.+......
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            4899999999999999999864   46788999998754321   2235677899999999 599999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          82 FMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      |+||||+++++|.+.+.....+++..++.++.|++.||.|||+.|++||||+|+||+++.++.++|+|||++........
T Consensus        81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  160 (288)
T cd05583          81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEE  160 (288)
T ss_pred             EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccc
Confidence            99999999999999998878899999999999999999999999999999999999999999999999999876543322


Q ss_pred             cccccccCCccccccccccCcc-cCCcccceechhhHHHHHHhCCCCCCCC----CHHHHHHHHHcCCCCCCCCCChHHH
Q psy6203         162 SQLQTSCGSPNYAAPEVIKGKQ-YYGSETDVWSMGVMLYALLCGFLPFDSD----SIDQLYDKILNGKYTEPPWMSPNSR  236 (568)
Q Consensus       162 ~~~~~~~gt~~y~aPE~l~~~~-~~~~~~DiwSlG~il~~lltG~~pf~~~----~~~~~~~~i~~~~~~~~~~~~~~~~  236 (568)
                      .......|+..|+|||.+.+.. ..+.++||||||+++|+|++|..||...    ...++.+.+.......+..+++.+.
T Consensus       161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  240 (288)
T cd05583         161 ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKPPFPKTMSAEAR  240 (288)
T ss_pred             cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCCCCCcccCHHHH
Confidence            2223346899999999986543 3478899999999999999999999643    2344455566666667777899999


Q ss_pred             HHHHHccccCcCCCCC---HHHHhcCccccc
Q psy6203         237 QIVRSMLQVEPGKRIK---IQDLLGHNWVKM  264 (568)
Q Consensus       237 ~li~~~L~~dP~~Rps---~~ell~hp~~~~  264 (568)
                      ++|.+||+.||++|||   +.++|+||||+.
T Consensus       241 ~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~  271 (288)
T cd05583         241 DFIQKLLEKDPKKRLGANGADEIKNHPFFQG  271 (288)
T ss_pred             HHHHHHhcCCHhhccCcchHHHHhcCccccc
Confidence            9999999999999998   567799999984


No 282
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00  E-value=3.7e-40  Score=329.03  Aligned_cols=250  Identities=25%  Similarity=0.423  Sum_probs=210.3

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCc----EEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGE----KVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIF   82 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   82 (568)
                      .++|++.+.||+|+||+||+|.+..+|.    .||+|++...........+.+|+.+++.++||||+++++++... ..+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~   84 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ   84 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence            3689999999999999999999877776    48999987554333455778899999999999999999998754 578


Q ss_pred             EEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          83 MVIEYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      ++|||+++|+|.+++... +.+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus        85 l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~  164 (279)
T cd05109          85 LVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET  164 (279)
T ss_pred             EEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccc
Confidence            999999999999999764 5699999999999999999999999999999999999999999999999999876543211


Q ss_pred             c-ccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCChHHHHH
Q psy6203         162 S-QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQI  238 (568)
Q Consensus       162 ~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~l  238 (568)
                      . ......+++.|+|||.+.+.. ++.++|||||||++|+|++ |..||.......+...+..+. .+.+...++++.++
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  243 (279)
T cd05109         165 EYHADGGKVPIKWMALESILHRR-FTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQPPICTIDVYMI  243 (279)
T ss_pred             eeecCCCccchhhCCHHHhccCC-CCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCccCCHHHHHH
Confidence            1 111223467899999997765 5889999999999999998 999998877777766666653 34456688999999


Q ss_pred             HHHccccCcCCCCCHHHHhc
Q psy6203         239 VRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       239 i~~~L~~dP~~Rps~~ell~  258 (568)
                      +.+||+.||++||++.+++.
T Consensus       244 i~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         244 MVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             HHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999984


No 283
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00  E-value=1.1e-40  Score=333.37  Aligned_cols=251  Identities=23%  Similarity=0.330  Sum_probs=212.5

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCC-----CcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLT-----GEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIF   82 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   82 (568)
                      .+|++.+.||+|+||.||+|.+..+     +..||+|++...........+..|+.+++.++||||+++++++...+..+
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~   84 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS   84 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence            4578899999999999999987543     57899999875432223456788999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeE
Q psy6203          83 MVIEYCPGGELLDHIVER----------------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLK  146 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~----------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~k  146 (568)
                      +++||+.+++|.+++...                ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+|
T Consensus        85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~k  164 (283)
T cd05091          85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVK  164 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceE
Confidence            999999999999998532                3478888999999999999999999999999999999999999999


Q ss_pred             EEeecCccCCCCCC-ccccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC
Q psy6203         147 LIDFGLCAKPEGGL-ESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK  224 (568)
Q Consensus       147 l~DFG~a~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~  224 (568)
                      |+|||+++...... ........+++.|+|||.+.+.. ++.++|||||||++|+|++ |..||.+.+..+..+.+..+.
T Consensus       165 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~  243 (283)
T cd05091         165 ISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGK-FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQ  243 (283)
T ss_pred             ecccccccccccchheeeccCccCCccccCHHHHhcCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCC
Confidence            99999987543221 11223344678999999987666 5889999999999999998 889999888888888887776


Q ss_pred             CC-CCCCCChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         225 YT-EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       225 ~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      .. .+...+..+.+++.+||+.+|.+||++++|+..
T Consensus       244 ~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         244 VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            53 456688999999999999999999999999863


No 284
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00  E-value=7e-40  Score=322.00  Aligned_cols=253  Identities=30%  Similarity=0.487  Sum_probs=218.3

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeC--CEEEEEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETS--SHIFMVI   85 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~--~~~~lV~   85 (568)
                      +|++.+.||+|++|.||+|.+..+++.|++|++...... ...+.+.+|+.++++++||||+++++.+...  +..++||
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~   80 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL   80 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence            588999999999999999999999999999998765432 2356788999999999999999999999888  8999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc-cc
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES-QL  164 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~-~~  164 (568)
                      ||+++++|.+++.....+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.++|+|||.+......... ..
T Consensus        81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~  160 (260)
T cd06606          81 EYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGT  160 (260)
T ss_pred             EecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccc
Confidence            99999999999988889999999999999999999999999999999999999999999999999998765543210 12


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCC-HHHHHHHHHc--CCCCCCCCCChHHHHHHHH
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKILN--GKYTEPPWMSPNSRQIVRS  241 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~-~~~~~~~i~~--~~~~~~~~~~~~~~~li~~  241 (568)
                      ....++..|+|||.+.+.. .+.++||||||+++|+|++|..||.... .......+..  .....+...+..+.++|.+
T Consensus       161 ~~~~~~~~y~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~  239 (260)
T cd06606         161 GSVRGTPYWMAPEVIRGEE-YGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRK  239 (260)
T ss_pred             cCCCCCccccCHhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHH
Confidence            3456889999999998766 5889999999999999999999997765 3333333332  2334556678999999999


Q ss_pred             ccccCcCCCCCHHHHhcCccc
Q psy6203         242 MLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       242 ~L~~dP~~Rps~~ell~hp~~  262 (568)
                      ||+.||++||++.|++.||||
T Consensus       240 ~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         240 CLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             hCcCChhhCCCHHHHhhCCCC
Confidence            999999999999999999997


No 285
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00  E-value=1.5e-40  Score=328.32  Aligned_cols=249  Identities=27%  Similarity=0.434  Sum_probs=214.5

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      -.++|++.+.||.|+||.||+|.+.. +..+|+|++..... .....+..|+.+++.++||||+++++++.+.+..++||
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~   81 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL-LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT   81 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch-hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEE
Confidence            45689999999999999999999977 88999999876542 23456888999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          86 EYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        86 E~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      ||+++++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||.+........ .
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~-~  160 (261)
T cd05148          82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY-L  160 (261)
T ss_pred             eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccc-c
Confidence            999999999999753  4689999999999999999999999999999999999999999999999999876543211 1


Q ss_pred             cccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCChHHHHHHHH
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRS  241 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~li~~  241 (568)
                      .....++..|+|||.+.+.. ++.++||||||+++|+|++ |..||...+..+....+..+ ..+.+...++.+.+++.+
T Consensus       161 ~~~~~~~~~~~~PE~~~~~~-~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  239 (261)
T cd05148         161 SSDKKIPYKWTAPEAASHGT-FSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCPAKCPQEIYKIMLE  239 (261)
T ss_pred             ccCCCCceEecCHHHHccCC-CCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCCCCCCHHHHHHHHH
Confidence            12334567899999987765 5889999999999999998 89999888877777777654 334556788999999999


Q ss_pred             ccccCcCCCCCHHHHhc
Q psy6203         242 MLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       242 ~L~~dP~~Rps~~ell~  258 (568)
                      ||+.||.+|||+.++++
T Consensus       240 ~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         240 CWAAEPEDRPSFKALRE  256 (261)
T ss_pred             HcCCCchhCcCHHHHHH
Confidence            99999999999999875


No 286
>KOG0666|consensus
Probab=100.00  E-value=1.3e-41  Score=318.88  Aligned_cols=259  Identities=27%  Similarity=0.422  Sum_probs=208.3

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCc----EEEEEEeecCCcCCc-hHHHHHHHHHHHhCCCCCcceeeEEEEe-CCE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGE----KVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLFQVIET-SSH   80 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~----~vavK~~~~~~~~~~-~~~~~~Ei~~l~~l~hpnIv~l~~~~~~-~~~   80 (568)
                      ...|++++.||+|+||.||+|..+.++.    .+|+|.++....... ....-+|+.+++.|+||||+.+..+|.. +..
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~  102 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK  102 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence            3579999999999999999997665543    689999886643322 3456789999999999999999999876 788


Q ss_pred             EEEEEeccCCCChHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCC----CCeEEEeec
Q psy6203          81 IFMVIEYCPGGELLDHIVE-----RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRN----QNLKLIDFG  151 (568)
Q Consensus        81 ~~lV~E~~~~g~L~~~i~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~----~~~kl~DFG  151 (568)
                      +++++||.+ -+|++.|.-     .+.++...++.|+.||+.|+.|||++-|+||||||.|||+..+    |.|||+|||
T Consensus       103 v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlG  181 (438)
T KOG0666|consen  103 VWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLG  181 (438)
T ss_pred             EEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeeccc
Confidence            999999996 589998863     2468999999999999999999999999999999999999877    899999999


Q ss_pred             CccCCCCCCcc--ccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCH---------HHHHHHH
Q psy6203         152 LCAKPEGGLES--QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSI---------DQLYDKI  220 (568)
Q Consensus       152 ~a~~~~~~~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~---------~~~~~~i  220 (568)
                      +++........  .....+.|.+|.|||++.|...|+++.||||+|||+.||+|-.+.|.+...         .....+|
T Consensus       182 laR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rI  261 (438)
T KOG0666|consen  182 LARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRI  261 (438)
T ss_pred             HHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHH
Confidence            99876654322  223446799999999999999999999999999999999998888754311         1122222


Q ss_pred             Hc--CCCCC---------C--------------------------CCCChHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q psy6203         221 LN--GKYTE---------P--------------------------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       221 ~~--~~~~~---------~--------------------------~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                      .+  |.+..         |                          ..-++...+|+.+||++||.+|+|++++|+|+||.
T Consensus       262 f~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~  341 (438)
T KOG0666|consen  262 FEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFT  341 (438)
T ss_pred             HHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccc
Confidence            21  11110         0                          11355688999999999999999999999999998


Q ss_pred             cCC
Q psy6203         264 MGP  266 (568)
Q Consensus       264 ~~~  266 (568)
                      ..+
T Consensus       342 ~d~  344 (438)
T KOG0666|consen  342 EDP  344 (438)
T ss_pred             cCC
Confidence            543


No 287
>PF07714 Pkinase_Tyr:  Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain;  InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []:   Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction [].      Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases [].  ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00  E-value=8.1e-41  Score=330.12  Aligned_cols=247  Identities=31%  Similarity=0.519  Sum_probs=205.7

Q ss_pred             EEEeeecccCCeEEEEEEEc----CCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203          11 ILERTVGSGGFAKVKLATHV----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus        11 ~i~~~lG~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      .+.+.||.|+||.||+|...    ..+..|+||.++.....+....+.+|++.+++++||||+++++++...+..++|||
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e   81 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME   81 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence            47899999999999999987    44678999999654333346788899999999999999999999998888999999


Q ss_pred             ccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCC-Cccc
Q psy6203          87 YCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGG-LESQ  163 (568)
Q Consensus        87 ~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~~~  163 (568)
                      |+++|+|.+++...  ..+++.....++.||+.||.|||+++++|+||+++||+++.++.+||+|||++...... ....
T Consensus        82 ~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~  161 (259)
T PF07714_consen   82 YCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKN  161 (259)
T ss_dssp             --TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            99999999999886  78999999999999999999999999999999999999999999999999998765221 1112


Q ss_pred             cccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCChHHHHHHHH
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-TEPPWMSPNSRQIVRS  241 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~  241 (568)
                      .....+...|+|||.+.+.. ++.++||||||+++|||++ |..||...+..++...+..+.. ..+...+..+.++|.+
T Consensus       162 ~~~~~~~~~~~aPE~~~~~~-~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  240 (259)
T PF07714_consen  162 DSSQQLPLRYLAPEVLKDGE-YTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCPKDIYSLIQQ  240 (259)
T ss_dssp             STTSESGGGGS-HHHHHHSE-ESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSBHHHHHHHHH
T ss_pred             cccccccccccccccccccc-ccccccccccccccccccccccccccccccccccccccccccceeccchhHHHHHHHHH
Confidence            23334677899999998766 5899999999999999999 7899998888888888876654 3455689999999999


Q ss_pred             ccccCcCCCCCHHHHhc
Q psy6203         242 MLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       242 ~L~~dP~~Rps~~ell~  258 (568)
                      ||..||++|||+.++++
T Consensus       241 C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  241 CWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             HT-SSGGGS--HHHHHH
T ss_pred             HcCCChhhCcCHHHHHh
Confidence            99999999999999974


No 288
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00  E-value=3.3e-40  Score=333.29  Aligned_cols=251  Identities=27%  Similarity=0.442  Sum_probs=208.2

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEc-----CCCcEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHV-----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIETSSH   80 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~   80 (568)
                      .++|.+.+.||+|+||.||+|.+.     .++..||+|.++........+.+.+|+.+++++ +||||+++++++...+.
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~  113 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP  113 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence            468999999999999999999752     345689999987654334456788999999999 79999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCC
Q psy6203          81 IFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEG  158 (568)
Q Consensus        81 ~~lV~E~~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  158 (568)
                      .|+||||+.+|+|.+++....  .+++.++..++.|++.||.|||+++|+|+||||+||+++.++.++|+|||++.....
T Consensus       114 ~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~  193 (302)
T cd05055         114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMN  193 (302)
T ss_pred             eEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccC
Confidence            999999999999999997643  389999999999999999999999999999999999999999999999999876543


Q ss_pred             CCcc-ccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHH-HHHcCC-CCCCCCCChH
Q psy6203         159 GLES-QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYD-KILNGK-YTEPPWMSPN  234 (568)
Q Consensus       159 ~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~-~i~~~~-~~~~~~~~~~  234 (568)
                      .... ......++..|+|||.+.+.. ++.++||||+||++|+|++ |..||.......... .+..+. ...+...++.
T Consensus       194 ~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (302)
T cd05055         194 DSNYVVKGNARLPVKWMAPESIFNCV-YTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAE  272 (302)
T ss_pred             CCceeecCCCCcccccCCHhhhccCC-CCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHH
Confidence            2111 112234577899999998766 5889999999999999998 999998766544433 333332 2334567899


Q ss_pred             HHHHHHHccccCcCCCCCHHHHhc
Q psy6203         235 SRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       235 ~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      +.+++.+||..+|++|||+.|++.
T Consensus       273 ~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         273 IYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             HHHHHHHHcCCCchhCcCHHHHHH
Confidence            999999999999999999999975


No 289
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00  E-value=3.3e-40  Score=332.15  Aligned_cols=251  Identities=21%  Similarity=0.316  Sum_probs=210.0

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCC----------------cEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcce
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTG----------------EKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICK   70 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~----------------~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~   70 (568)
                      .++|++.+.||+|+||.||+|.+..++                ..||+|.+...........+.+|+.++++++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~   83 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR   83 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence            468999999999999999999876544                4589999876543334567888999999999999999


Q ss_pred             eeEEEEeCCEEEEEEeccCCCChHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEE
Q psy6203          71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQ-----------RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLL  139 (568)
Q Consensus        71 l~~~~~~~~~~~lV~E~~~~g~L~~~i~~~~-----------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll  139 (568)
                      +++++..++..++||||+++++|.+++....           .+++..++.++.|++.||.|||++||+||||||+||++
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili  163 (296)
T cd05051          84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLV  163 (296)
T ss_pred             EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceee
Confidence            9999999999999999999999999997755           68999999999999999999999999999999999999


Q ss_pred             cCCCCeEEEeecCccCCCCCCc-cccccccCCccccccccccCcccCCcccceechhhHHHHHHh--CCCCCCCCCHHHH
Q psy6203         140 DRNQNLKLIDFGLCAKPEGGLE-SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC--GFLPFDSDSIDQL  216 (568)
Q Consensus       140 ~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt--G~~pf~~~~~~~~  216 (568)
                      +.++.++|+|||++........ .......+++.|+|||.+.+.. ++.++|||||||++|+|++  |..||...+..+.
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~  242 (296)
T cd05051         164 GKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGK-FTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQV  242 (296)
T ss_pred             cCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCC-CCccchhhhhHHHHHHHHhcCCCCCCCCcChHHH
Confidence            9999999999999875432211 1122345678899999987765 5899999999999999998  7889987776666


Q ss_pred             HHHHHcC--------CCCCCCCCChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         217 YDKILNG--------KYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       217 ~~~i~~~--------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      ...+...        ....+...+.++.+++.+||+.||.+|||+.|++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         243 IENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             HHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            5555432        11233456789999999999999999999999964


No 290
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2,  and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00  E-value=4.8e-40  Score=323.28  Aligned_cols=250  Identities=30%  Similarity=0.506  Sum_probs=220.4

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      +|++.+.||+|+||.||++.+..+++.+|+|.+...... .....+..|+.++++++||||+++++++.+....|+||||
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY   80 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence            589999999999999999999999999999998765432 2345667899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          88 CPGGELLDHIVE----RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        88 ~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      +++++|.+++..    ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||++......   .
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~---~  157 (256)
T cd08530          81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN---M  157 (256)
T ss_pred             cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC---C
Confidence            999999999866    356899999999999999999999999999999999999999999999999998765443   2


Q ss_pred             cccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-CCCCCChHHHHHHHHc
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNSRQIVRSM  242 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~li~~~  242 (568)
                      .....+++.|+|||.+.+.. ++.++|+||||+++|+|++|+.||...+..++...+..+.++ .+...+.++.+++.+|
T Consensus       158 ~~~~~~~~~~~~Pe~~~~~~-~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  236 (256)
T cd08530         158 AKTQIGTPHYMAPEVWKGRP-YSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSM  236 (256)
T ss_pred             cccccCCccccCHHHHCCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCchhhCHHHHHHHHHH
Confidence            23356889999999998765 588999999999999999999999998888777777766654 3456788999999999


Q ss_pred             cccCcCCCCCHHHHhcCccc
Q psy6203         243 LQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       243 L~~dP~~Rps~~ell~hp~~  262 (568)
                      |+.+|++|||+.++++||++
T Consensus       237 l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         237 LQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             cCCCcccCCCHHHHhcCCCC
Confidence            99999999999999999974


No 291
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00  E-value=4.3e-40  Score=338.41  Aligned_cols=254  Identities=29%  Similarity=0.478  Sum_probs=209.0

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC-chHHHHHHHHHHHhCCCCCcceeeEEEEeC-----
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQVIETS-----   78 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~-----   78 (568)
                      .+.++|.+.+.||+|+||.||+|.+..+|+.||+|.+.+....+ ....+.+|+.+++.++||||+++++++...     
T Consensus        12 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~   91 (342)
T cd07879          12 ELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDE   91 (342)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCC
Confidence            45689999999999999999999999999999999987643222 234577899999999999999999998654     


Q ss_pred             -CEEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCC
Q psy6203          79 -SHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPE  157 (568)
Q Consensus        79 -~~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~  157 (568)
                       ..+|+||||+. .+|...+  ...+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||++....
T Consensus        92 ~~~~~lv~e~~~-~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~  168 (342)
T cd07879          92 FQDFYLVMPYMQ-TDLQKIM--GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHAD  168 (342)
T ss_pred             CceEEEEecccc-cCHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCC
Confidence             35699999995 4676654  3468999999999999999999999999999999999999999999999999987543


Q ss_pred             CCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC-------------
Q psy6203         158 GGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK-------------  224 (568)
Q Consensus       158 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~-------------  224 (568)
                      ..    .....+++.|+|||.+.+...++.++|||||||++|+|++|+.||.+.+.......+....             
T Consensus       169 ~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (342)
T cd07879         169 AE----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLED  244 (342)
T ss_pred             CC----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcc
Confidence            21    2234678899999998765446889999999999999999999998876544433332210             


Q ss_pred             ----------CCC--------CCCCChHHHHHHHHccccCcCCCCCHHHHhcCcccccC
Q psy6203         225 ----------YTE--------PPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       225 ----------~~~--------~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                                ...        .+..++.+.+||.+||+.||.+||++++++.||||...
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~  303 (342)
T cd07879         245 KAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF  303 (342)
T ss_pred             cchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence                      000        12357789999999999999999999999999999854


No 292
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00  E-value=4e-40  Score=324.70  Aligned_cols=242  Identities=22%  Similarity=0.347  Sum_probs=204.5

Q ss_pred             eecccCCeEEEEEEE--cCCCcEEEEEEeecCCcCC-chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCC
Q psy6203          15 TVGSGGFAKVKLATH--VLTGEKVAIKIMKKATLGE-DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGG   91 (568)
Q Consensus        15 ~lG~G~~g~V~~~~~--~~~~~~vavK~~~~~~~~~-~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g   91 (568)
                      .||+|+||.||+|..  ..++..+|+|+++...... ..+.+..|+.+++.++||||+++++++.. +..++||||++++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence            689999999999964  4577899999987543322 24567889999999999999999998854 5678999999999


Q ss_pred             ChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc--ccccccC
Q psy6203          92 ELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES--QLQTSCG  169 (568)
Q Consensus        92 ~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~--~~~~~~g  169 (568)
                      +|.+++.....+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++.........  ......+
T Consensus        81 ~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~  160 (257)
T cd05116          81 PLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKW  160 (257)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCC
Confidence            99999988888999999999999999999999999999999999999999999999999998765432211  1122234


Q ss_pred             CccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCChHHHHHHHHccccCc
Q psy6203         170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-TEPPWMSPNSRQIVRSMLQVEP  247 (568)
Q Consensus       170 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~L~~dP  247 (568)
                      +..|+|||.+.+.. ++.++|||||||++|+|++ |..||...+..++.+.+..+.. +.+...++++.++|.+||+.||
T Consensus       161 ~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~~~~~~p  239 (257)
T cd05116         161 PVKWYAPECMNYYK-FSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECPQRCPPEMYDLMKLCWTYGV  239 (257)
T ss_pred             CccccCHhHhccCC-cCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHhccCc
Confidence            67899999987655 5889999999999999998 9999998888788777776643 4566789999999999999999


Q ss_pred             CCCCCHHHHhc
Q psy6203         248 GKRIKIQDLLG  258 (568)
Q Consensus       248 ~~Rps~~ell~  258 (568)
                      ++||++++|..
T Consensus       240 ~~Rp~~~~i~~  250 (257)
T cd05116         240 DERPGFAVVEL  250 (257)
T ss_pred             hhCcCHHHHHH
Confidence            99999999864


No 293
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00  E-value=3.8e-40  Score=329.35  Aligned_cols=250  Identities=30%  Similarity=0.474  Sum_probs=208.6

Q ss_pred             eEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCC-CCCcceeeEEEEeCCEEEEEEecc
Q psy6203          10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS-HQHICKLFQVIETSSHIFMVIEYC   88 (568)
Q Consensus        10 Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~~~lV~E~~   88 (568)
                      |++.+.||+|++|+||+|....+++.||+|.+.............+|+..+++++ ||||+++++++..++..++||||+
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   80 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM   80 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence            7889999999999999999988999999999876543323334557899999999 999999999999999999999999


Q ss_pred             CCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          89 PGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        89 ~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                       +|+|.+.+....  .+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++......  .....
T Consensus        81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~--~~~~~  157 (283)
T cd07830          81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR--PPYTD  157 (283)
T ss_pred             -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCC--CCcCC
Confidence             889999887764  7899999999999999999999999999999999999999999999999998765432  12234


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC-------------------CCC-
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG-------------------KYT-  226 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~-------------------~~~-  226 (568)
                      ..++..|+|||++.+...++.++|+||||+++++|++|++||...+.......+...                   ... 
T Consensus       158 ~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (283)
T cd07830         158 YVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRF  237 (283)
T ss_pred             CCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccc
Confidence            568889999999876555688999999999999999999999776554433322210                   000 


Q ss_pred             ----------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         227 ----------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       227 ----------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                                ..+..++.+.++|.+||+.||++|||++|++.||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         238 PQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             cccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence                      011236789999999999999999999999999997


No 294
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00  E-value=4.8e-40  Score=362.22  Aligned_cols=250  Identities=23%  Similarity=0.360  Sum_probs=204.2

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++.++||+|+||.||+|.+..+|+.||+|++.......  ....+.+|+.++++++||||+++++++.+.+..|+||
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM   81 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM   81 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence            68999999999999999999999999999999987543222  2356888999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhc-----------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCcc
Q psy6203          86 EYCPGGELLDHIVER-----------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCA  154 (568)
Q Consensus        86 E~~~~g~L~~~i~~~-----------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  154 (568)
                      ||++|++|.+++...           ..++...+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++.
T Consensus        82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk  161 (932)
T PRK13184         82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAI  161 (932)
T ss_pred             EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcce
Confidence            999999999988641           234566788999999999999999999999999999999999999999999987


Q ss_pred             CCCCCC-----------------ccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHH
Q psy6203         155 KPEGGL-----------------ESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLY  217 (568)
Q Consensus       155 ~~~~~~-----------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~  217 (568)
                      ......                 .......+||+.|+|||++.+.. ++.++|||||||++|+|+||..||.........
T Consensus       162 ~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~-~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~  240 (932)
T PRK13184        162 FKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVP-ASESTDIYALGVILYQMLTLSFPYRRKKGRKIS  240 (932)
T ss_pred             ecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCC-CCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhh
Confidence            542110                 00112346999999999998776 589999999999999999999999876544332


Q ss_pred             HHHHcCCC---CCCCCCChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         218 DKILNGKY---TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       218 ~~i~~~~~---~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      ........   .....+++.+.+++.+||+.||++|++..+.+.
T Consensus       241 ~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl  284 (932)
T PRK13184        241 YRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK  284 (932)
T ss_pred             hhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            22111111   112347889999999999999999987666554


No 295
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00  E-value=3.2e-40  Score=328.60  Aligned_cols=251  Identities=22%  Similarity=0.381  Sum_probs=213.9

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCC-----CcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLT-----GEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIF   82 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   82 (568)
                      ++|++.+.||+|+||.||+|+.+.+     .+.+|+|.+...........+.+|+.++++++||||+++++++.+.+..|
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   84 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY   84 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence            6899999999999999999997643     46799998865443324567889999999999999999999999989999


Q ss_pred             EEEeccCCCChHHHHHhcC---------CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCc
Q psy6203          83 MVIEYCPGGELLDHIVERQ---------RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC  153 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~~---------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a  153 (568)
                      +||||+++|+|.+++....         .+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++
T Consensus        85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~  164 (275)
T cd05046          85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLS  164 (275)
T ss_pred             EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccc
Confidence            9999999999999998655         6899999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCC--CCCC
Q psy6203         154 AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYT--EPPW  230 (568)
Q Consensus       154 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~~--~~~~  230 (568)
                      ...............+++.|+|||.+.+.. .+.++||||||+++|+|++ |..||...........+..+...  .+..
T Consensus       165 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  243 (275)
T cd05046         165 KDVYNSEYYKLRNALIPLRWLAPEAVQEDD-FSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEG  243 (275)
T ss_pred             cccCcccccccCCceeEEeecChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCCCC
Confidence            654332222233445677899999987665 5789999999999999998 88999877777777777655543  3456


Q ss_pred             CChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         231 MSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       231 ~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      .+..+.+++.+||+.||.+|||+.|++.+
T Consensus       244 ~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         244 CPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             CCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            78999999999999999999999999864


No 296
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00  E-value=2e-40  Score=340.29  Aligned_cols=258  Identities=30%  Similarity=0.446  Sum_probs=211.3

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCc-CCchHHHHHHHHHHHhC-CCCCcceeeEEEEeC--CE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL-GEDLPRVKLEINALKHI-SHQHICKLFQVIETS--SH   80 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~--~~   80 (568)
                      .+.++|++.+.||+|+||.||+|.+..+|+.+|+|.+..... ......+.+|+.+++++ +||||+++++++...  ..
T Consensus         4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~   83 (337)
T cd07852           4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKD   83 (337)
T ss_pred             hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCce
Confidence            467899999999999999999999998999999998864322 12334567899999999 999999999998643  46


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC
Q psy6203          81 IFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL  160 (568)
Q Consensus        81 ~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  160 (568)
                      .|+||||++ ++|.+++..+ .+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus        84 ~~lv~e~~~-~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~  161 (337)
T cd07852          84 IYLVFEYME-TDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELE  161 (337)
T ss_pred             EEEEecccc-cCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccc
Confidence            899999996 5898888665 78999999999999999999999999999999999999999999999999987543322


Q ss_pred             c----cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC------------
Q psy6203         161 E----SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK------------  224 (568)
Q Consensus       161 ~----~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~------------  224 (568)
                      .    .......|++.|+|||.+.+...++.++||||||+++|+|++|+.||.+.+.......+....            
T Consensus       162 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  241 (337)
T cd07852         162 ENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIK  241 (337)
T ss_pred             ccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHH
Confidence            1    122334689999999998766556889999999999999999999997765443332221110            


Q ss_pred             ---------------C----CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         225 ---------------Y----TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       225 ---------------~----~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                                     .    ...+..+.++.++|.+||+.||++|||+.++++|||++.
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~  300 (337)
T cd07852         242 SPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ  300 (337)
T ss_pred             hhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence                           0    011236788999999999999999999999999999974


No 297
>KOG0584|consensus
Probab=100.00  E-value=1.8e-41  Score=346.11  Aligned_cols=252  Identities=25%  Similarity=0.446  Sum_probs=218.4

Q ss_pred             ccCe-EEEeeecccCCeEEEEEEEcCCCcEEEEEEeecC---CcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCE--
Q psy6203           7 RNQY-ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKA---TLGEDLPRVKLEINALKHISHQHICKLFQVIETSSH--   80 (568)
Q Consensus         7 ~~~Y-~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~--   80 (568)
                      .++| +...+||+|+|-+||+|.|..+|..||--.++..   ...+..+++..|+.+|+.|+||||+++|++|.+...  
T Consensus        38 ~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~  117 (632)
T KOG0584|consen   38 TGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKT  117 (632)
T ss_pred             CCceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCce
Confidence            3455 4567899999999999999999999885444322   223456789999999999999999999999987655  


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc--CceecCCCCCceEEcCC-CCeEEEeecCccCCC
Q psy6203          81 IFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL--GYAHRDLKPENVLLDRN-QNLKLIDFGLCAKPE  157 (568)
Q Consensus        81 ~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~--~ivHrDlkp~NIll~~~-~~~kl~DFG~a~~~~  157 (568)
                      +.+|+|++..|+|..++++.++++...++.|++||++||.|||++  .|+|||||-+||+|+.+ |.|||+|+|+|+...
T Consensus       118 in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r  197 (632)
T KOG0584|consen  118 INFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLR  197 (632)
T ss_pred             eeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhh
Confidence            889999999999999999999999999999999999999999988  59999999999999755 899999999998765


Q ss_pred             CCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCC-CCHHHHHHHHHcCCCCC--CCCCChH
Q psy6203         158 GGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYTE--PPWMSPN  234 (568)
Q Consensus       158 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~-~~~~~~~~~i~~~~~~~--~~~~~~~  234 (568)
                      ..   ......|||.|||||+...  .|+..+||||||+++.||+|+..||.. .+..++++++..|..+.  ...-.|+
T Consensus       198 ~s---~aksvIGTPEFMAPEmYEE--~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPe  272 (632)
T KOG0584|consen  198 KS---HAKSVIGTPEFMAPEMYEE--NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPE  272 (632)
T ss_pred             cc---ccceeccCccccChHHHhh--hcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHH
Confidence            43   3345689999999999973  379999999999999999999999965 56788999999987653  2335799


Q ss_pred             HHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         235 SRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       235 ~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      +++||.+||.. ..+|+|+.|+|.||||..
T Consensus       273 vr~fIekCl~~-~~~R~sa~eLL~d~Ff~~  301 (632)
T KOG0584|consen  273 VREFIEKCLAT-KSERLSAKELLKDPFFDE  301 (632)
T ss_pred             HHHHHHHHhcC-chhccCHHHHhhChhhcc
Confidence            99999999999 999999999999999985


No 298
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00  E-value=8e-40  Score=323.07  Aligned_cols=249  Identities=26%  Similarity=0.431  Sum_probs=212.8

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ..++|++.+.||+|+||.||+|.+. .+..+|+|.+.....  ....+.+|+.++++++||||+++++++......++||
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   80 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM--SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT   80 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc--CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence            4678999999999999999999975 557899999875432  3457889999999999999999999999888999999


Q ss_pred             eccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          86 EYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        86 E~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      ||+++++|.+++...  ..+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++..........
T Consensus        81 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~  160 (261)
T cd05034          81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTA  160 (261)
T ss_pred             eccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhh
Confidence            999999999999764  368999999999999999999999999999999999999999999999999987654321111


Q ss_pred             cccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCChHHHHHHHH
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQIVRS  241 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~  241 (568)
                      .....++..|+|||.+.+.. ++.++||||+||++|+|++ |+.||.+.+.......+..+. .+.+...+.++.+++.+
T Consensus       161 ~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  239 (261)
T cd05034         161 REGAKFPIKWTAPEAANYGR-FTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPNCPEELYDLMLQ  239 (261)
T ss_pred             hhccCCCccccCHHHhccCC-cCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence            12223456899999998765 5889999999999999998 999999888877777776653 34455678899999999


Q ss_pred             ccccCcCCCCCHHHHhc
Q psy6203         242 MLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       242 ~L~~dP~~Rps~~ell~  258 (568)
                      ||+.+|++||+++++++
T Consensus       240 ~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         240 CWDKDPEERPTFEYLQS  256 (261)
T ss_pred             HcccCcccCCCHHHHHH
Confidence            99999999999999864


No 299
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00  E-value=6.3e-40  Score=323.19  Aligned_cols=243  Identities=24%  Similarity=0.404  Sum_probs=205.8

Q ss_pred             eeecccCCeEEEEEEEcCCC---cEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          14 RTVGSGGFAKVKLATHVLTG---EKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      ++||+|+||.||+|....++   ..+|+|.+...........+.+|+.+++.++||||+++++++. .+..++||||+++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~   79 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL   79 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence            47999999999999876554   7899999876654334567888999999999999999999876 4567999999999


Q ss_pred             CChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc--cccc
Q psy6203          91 GELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL--QTSC  168 (568)
Q Consensus        91 g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~--~~~~  168 (568)
                      ++|.+++.....+++..+..++.|++.||.|||+.|++||||||+||+++.++.+||+|||++...........  ....
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~  159 (257)
T cd05060          80 GPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGR  159 (257)
T ss_pred             CcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCcc
Confidence            99999998888899999999999999999999999999999999999999999999999999876543221111  1112


Q ss_pred             CCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCChHHHHHHHHccccC
Q psy6203         169 GSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-TEPPWMSPNSRQIVRSMLQVE  246 (568)
Q Consensus       169 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~L~~d  246 (568)
                      ++..|+|||.+.+.. ++.++|||||||++|+|++ |..||...+..++...+..+.. ..+...++.+.++|.+||..|
T Consensus       160 ~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~  238 (257)
T cd05060         160 WPLKWYAPECINYGK-FSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERLPRPEECPQEIYSIMLSCWKYR  238 (257)
T ss_pred             ccccccCHHHhcCCC-CCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhcCC
Confidence            346799999997765 5889999999999999998 9999988887777777766543 455668899999999999999


Q ss_pred             cCCCCCHHHHhc
Q psy6203         247 PGKRIKIQDLLG  258 (568)
Q Consensus       247 P~~Rps~~ell~  258 (568)
                      |++|||+.++++
T Consensus       239 p~~Rp~~~~l~~  250 (257)
T cd05060         239 PEDRPTFSELES  250 (257)
T ss_pred             hhhCcCHHHHHH
Confidence            999999999875


No 300
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00  E-value=9.3e-40  Score=334.61  Aligned_cols=255  Identities=27%  Similarity=0.418  Sum_probs=207.6

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCC--CcEEEEEEeecCCcC-CchHHHHHHHHHHHhC-CCCCcceeeEEEEe----CCE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLT--GEKVAIKIMKKATLG-EDLPRVKLEINALKHI-SHQHICKLFQVIET----SSH   80 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~--~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~----~~~   80 (568)
                      +|++.+.||+|+||.||+|.+..+  +..||+|++...... .....+.+|+.+++++ +||||+++++....    ...
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~   80 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE   80 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence            589999999999999999999888  899999998753222 1244677899999999 59999999987532    246


Q ss_pred             EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC
Q psy6203          81 IFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL  160 (568)
Q Consensus        81 ~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  160 (568)
                      +|++|||+. ++|.+.+.....+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus        81 ~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~  159 (332)
T cd07857          81 LYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENP  159 (332)
T ss_pred             EEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccccc
Confidence            789999995 6899999888889999999999999999999999999999999999999999999999999987543321


Q ss_pred             c---cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC--------------
Q psy6203         161 E---SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--------------  223 (568)
Q Consensus       161 ~---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~--------------  223 (568)
                      .   .......||+.|+|||.+.+...++.++||||+||++|+|++|.+||...+.......+...              
T Consensus       160 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (332)
T cd07857         160 GENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGS  239 (332)
T ss_pred             ccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhh
Confidence            1   11233468999999999876555689999999999999999999999876544333222110              


Q ss_pred             -----------CCC------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         224 -----------KYT------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       224 -----------~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                                 ...      ..+..+..+.+++.+||+.||.+|||+.|++.|||+..
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~  297 (332)
T cd07857         240 PKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAI  297 (332)
T ss_pred             hhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhh
Confidence                       000      11235788999999999999999999999999999974


No 301
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00  E-value=2.3e-40  Score=338.49  Aligned_cols=252  Identities=23%  Similarity=0.343  Sum_probs=202.3

Q ss_pred             Eeeeccc--CCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccC
Q psy6203          13 ERTVGSG--GFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCP   89 (568)
Q Consensus        13 ~~~lG~G--~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~   89 (568)
                      ...||.|  +||+||+|.+..+|+.||+|++...... +..+.+.+|+.+++.++||||+++++++...+..++||||+.
T Consensus         3 ~~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~   82 (328)
T cd08226           3 QVEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA   82 (328)
T ss_pred             HHHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence            3456776  9999999999999999999998765432 234678889999999999999999999999999999999999


Q ss_pred             CCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc-----
Q psy6203          90 GGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES-----  162 (568)
Q Consensus        90 ~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~-----  162 (568)
                      +++|.+++...  ..+++..+..++.||+.||+|||++||+||||||+||+++.++.++++|||.+.........     
T Consensus        83 ~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (328)
T cd08226          83 YGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVY  162 (328)
T ss_pred             CCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccc
Confidence            99999998764  35899999999999999999999999999999999999999999999999864322111000     


Q ss_pred             -ccccccCCccccccccccCc-ccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC--------------
Q psy6203         163 -QLQTSCGSPNYAAPEVIKGK-QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--------------  226 (568)
Q Consensus       163 -~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~--------------  226 (568)
                       ......++..|+|||++.+. ..++.++||||+||++|+|++|..||......+.......+...              
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (328)
T cd08226         163 DFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESR  242 (328)
T ss_pred             cccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhh
Confidence             01112356679999999764 23578999999999999999999999876544433332221110              


Q ss_pred             ---------------------------------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         227 ---------------------------------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       227 ---------------------------------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                                                       .+...++.+.+||++||+.||++|||++|+++||||+.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~  313 (328)
T cd08226         243 MKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQ  313 (328)
T ss_pred             hccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHH
Confidence                                             01124667899999999999999999999999999974


No 302
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00  E-value=1.3e-39  Score=322.37  Aligned_cols=249  Identities=28%  Similarity=0.455  Sum_probs=211.4

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|.++.....  .....+.+|+.++++++|+||+++++.+...+..++||
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~   81 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL   81 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence            6899999999999999999999999999999998753322  22457889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          86 EYCPGGELLDHIVE----RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        86 E~~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      ||+++++|.+++..    ...+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||++....... 
T Consensus        82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~-  160 (267)
T cd08224          82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT-  160 (267)
T ss_pred             ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC-
Confidence            99999999998864    3458999999999999999999999999999999999999999999999999987543321 


Q ss_pred             cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCC--CHHHHHHHHHcCCCC-CCC-CCChHHHH
Q psy6203         162 SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSD--SIDQLYDKILNGKYT-EPP-WMSPNSRQ  237 (568)
Q Consensus       162 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~--~~~~~~~~i~~~~~~-~~~-~~~~~~~~  237 (568)
                      .......+++.|+|||.+.+.. ++.++|||||||++|+|++|..||...  +..+..+.+..+... .+. ..+..+.+
T Consensus       161 ~~~~~~~~~~~y~apE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd08224         161 TAAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRD  239 (267)
T ss_pred             cccceecCCccccCHHHhccCC-CCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHH
Confidence            1223446889999999998766 588999999999999999999999654  334455555555443 222 57789999


Q ss_pred             HHHHccccCcCCCCCHHHHhc
Q psy6203         238 IVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       238 li~~~L~~dP~~Rps~~ell~  258 (568)
                      +|.+||..+|++|||+.++++
T Consensus       240 ~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         240 LVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             HHHHHcCCCcccCCCHHHHHH
Confidence            999999999999999999875


No 303
>KOG4645|consensus
Probab=100.00  E-value=3.2e-42  Score=374.14  Aligned_cols=260  Identities=29%  Similarity=0.498  Sum_probs=224.4

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      +.-+++-...||.|.||.||.|.+..+|+..|+|.++-.... ...+.+.+|..++..|+|||+|++|++-.+.+.++|.
T Consensus      1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred             ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence            334566778999999999999999999999999988754432 3456788999999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC---c
Q psy6203          85 IEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL---E  161 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~---~  161 (568)
                      ||||+||+|.+.+...+-.+|...+.+..|++.|+.|||+.|||||||||.||+++.+|.+|++|||.|.......   .
T Consensus      1313 MEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~ 1392 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMP 1392 (1509)
T ss_pred             HHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCC
Confidence            9999999999999877778888999999999999999999999999999999999999999999999998765542   1


Q ss_pred             cccccccCCccccccccccCcc--cCCcccceechhhHHHHHHhCCCCCCCCC-HHHHHHHHHcC-CCCCCCCCChHHHH
Q psy6203         162 SQLQTSCGSPNYAAPEVIKGKQ--YYGSETDVWSMGVMLYALLCGFLPFDSDS-IDQLYDKILNG-KYTEPPWMSPNSRQ  237 (568)
Q Consensus       162 ~~~~~~~gt~~y~aPE~l~~~~--~~~~~~DiwSlG~il~~lltG~~pf~~~~-~~~~~~~i~~~-~~~~~~~~~~~~~~  237 (568)
                      ...+...||+.|||||++.+..  ....++|||||||++.||+||+.||...+ .-+++-.+-.| .++.|..+|++.++
T Consensus      1393 ~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~d 1472 (1509)
T KOG4645|consen 1393 GELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRD 1472 (1509)
T ss_pred             HHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHH
Confidence            2345568999999999997643  24568999999999999999999997543 33455555555 55678889999999


Q ss_pred             HHHHccccCcCCCCCHHHHhcCcccccC
Q psy6203         238 IVRSMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       238 li~~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                      ||.+||..||.+|.++.|+++|.|-+..
T Consensus      1473 Fle~Cl~~dP~~Rw~~~qlle~~f~~~~ 1500 (1509)
T KOG4645|consen 1473 FLEHCLEQDPKMRWTASQLLEHAFGKSC 1500 (1509)
T ss_pred             HHHHHHhcCchhhhHHHHHHHhhccccc
Confidence            9999999999999999999999988754


No 304
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00  E-value=1.4e-39  Score=330.46  Aligned_cols=255  Identities=28%  Similarity=0.398  Sum_probs=213.2

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIF   82 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   82 (568)
                      +..+.|...+.||+|+||+||+|.+..+|+.||+|++......  .....+..|+.+++.++|||++++++++.+.+..|
T Consensus        18 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   97 (313)
T cd06633          18 DPEEIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAW   97 (313)
T ss_pred             CHHHHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEE
Confidence            4455688889999999999999999999999999998754332  22346778999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          83 MVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      +||||+. |+|.+.+.. ...+++..+..++.||+.||.|||++||+|+||+|+||+++.++.+||+|||++....    
T Consensus        98 lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~----  172 (313)
T cd06633          98 LVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSS----  172 (313)
T ss_pred             EEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccC----
Confidence            9999995 577777754 4578999999999999999999999999999999999999999999999999876432    


Q ss_pred             cccccccCCccccccccccC--cccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC--CCCCCChHHHH
Q psy6203         162 SQLQTSCGSPNYAAPEVIKG--KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPWMSPNSRQ  237 (568)
Q Consensus       162 ~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~  237 (568)
                       ......|+..|+|||++.+  ...++.++|||||||++|+|++|..||...+.......+.....+  .....+..+++
T Consensus       173 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  251 (313)
T cd06633         173 -PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRG  251 (313)
T ss_pred             -CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHH
Confidence             1234568899999999852  233688999999999999999999999876655544444433322  22346778999


Q ss_pred             HHHHccccCcCCCCCHHHHhcCcccccC
Q psy6203         238 IVRSMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       238 li~~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                      |+.+||+.+|.+||++.+++.||||...
T Consensus       252 li~~~l~~~P~~Rp~~~~~l~~~~~~~~  279 (313)
T cd06633         252 FVDYCLQKIPQERPASAELLRHDFVRRD  279 (313)
T ss_pred             HHHHHccCChhhCcCHHHHhcCcccCCC
Confidence            9999999999999999999999999843


No 305
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00  E-value=7.7e-40  Score=326.83  Aligned_cols=249  Identities=21%  Similarity=0.349  Sum_probs=206.5

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcE----EEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEK----VAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFM   83 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~----vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l   83 (568)
                      ++|++.+.||+|+||+||+|.+..++..    +++|.+...........+..|+.++++++||||+++++++. ....++
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~~~~   85 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GASLQL   85 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCccEE
Confidence            6789999999999999999998877764    66676643322223456777888899999999999999875 455789


Q ss_pred             EEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc-
Q psy6203          84 VIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE-  161 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-  161 (568)
                      |+||+++|+|.+++.. .+.+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||+++....... 
T Consensus        86 i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~  165 (279)
T cd05111          86 VTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKK  165 (279)
T ss_pred             EEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcc
Confidence            9999999999999976 45789999999999999999999999999999999999999999999999999875433211 


Q ss_pred             cccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCC-CCCCChHHHHHH
Q psy6203         162 SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTE-PPWMSPNSRQIV  239 (568)
Q Consensus       162 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~li  239 (568)
                      .......++..|+|||.+.+.. ++.++|||||||++|+|++ |..||.+.......+.+..+.... +...+.++.+++
T Consensus       166 ~~~~~~~~~~~y~~pE~~~~~~-~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  244 (279)
T cd05111         166 YFYSEHKTPIKWMALESILFGR-YTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQICTIDVYMVM  244 (279)
T ss_pred             cccCCCCCcccccCHHHhccCC-cCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCCCCCHHHHHHH
Confidence            1122345677899999998766 5899999999999999998 999999887777666666655433 344677899999


Q ss_pred             HHccccCcCCCCCHHHHhc
Q psy6203         240 RSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       240 ~~~L~~dP~~Rps~~ell~  258 (568)
                      .+|+..||++|||+.|++.
T Consensus       245 ~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         245 VKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             HHHcCCCcccCcCHHHHHH
Confidence            9999999999999999976


No 306
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00  E-value=8.1e-40  Score=320.89  Aligned_cols=243  Identities=27%  Similarity=0.436  Sum_probs=205.4

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCCCh
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGEL   93 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g~L   93 (568)
                      ++||+|+||.||+|... ++..+|+|.+...........+.+|+.+++.++||||+++++++...+..++||||+++++|
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L   79 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDF   79 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcH
Confidence            47899999999999864 68899999987544323344678899999999999999999999999999999999999999


Q ss_pred             HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCCcc
Q psy6203          94 LDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPN  172 (568)
Q Consensus        94 ~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~  172 (568)
                      .+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++...............++..
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~  159 (250)
T cd05085          80 LSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIK  159 (250)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCccc
Confidence            9998754 468899999999999999999999999999999999999999999999999987543322222222344678


Q ss_pred             ccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCChHHHHHHHHccccCcCCC
Q psy6203         173 YAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-TEPPWMSPNSRQIVRSMLQVEPGKR  250 (568)
Q Consensus       173 y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R  250 (568)
                      |+|||++.+.. ++.++||||||+++|++++ |..||...........+..+.. ..+..++..+.+++.+||+.+|++|
T Consensus       160 y~aPE~~~~~~-~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R  238 (250)
T cd05085         160 WTAPEALNYGR-YSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCPDDVYKVMQRCWDYKPENR  238 (250)
T ss_pred             ccCHHHhccCC-CCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccCcccC
Confidence            99999997665 5889999999999999998 9999988887777777665532 3455688999999999999999999


Q ss_pred             CCHHHHhc
Q psy6203         251 IKIQDLLG  258 (568)
Q Consensus       251 ps~~ell~  258 (568)
                      ||+.|+++
T Consensus       239 p~~~~l~~  246 (250)
T cd05085         239 PKFSELQK  246 (250)
T ss_pred             CCHHHHHH
Confidence            99999975


No 307
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00  E-value=3.5e-40  Score=329.45  Aligned_cols=251  Identities=31%  Similarity=0.468  Sum_probs=210.8

Q ss_pred             eEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEecc
Q psy6203          10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYC   88 (568)
Q Consensus        10 Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~   88 (568)
                      |++.+.||+|++|.||+|.+..+|+.+|+|.+...... .....+.+|+.++++++||||+++++++...+..++||||+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~   80 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM   80 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence            67889999999999999999999999999998765433 23456788999999999999999999999999999999999


Q ss_pred             CCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccc
Q psy6203          89 PGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS  167 (568)
Q Consensus        89 ~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~  167 (568)
                      ++ +|.+.+... ..+++..+..++.||+.||.|||+.||+|+||||+||+++.++.++|+|||.+....... ......
T Consensus        81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~-~~~~~~  158 (283)
T cd05118          81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV-RPYTHY  158 (283)
T ss_pred             CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-ccccCc
Confidence            65 888887663 689999999999999999999999999999999999999999999999999987654432 122234


Q ss_pred             cCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCC-------------------CC--
Q psy6203         168 CGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK-------------------YT--  226 (568)
Q Consensus       168 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~-------------------~~--  226 (568)
                      .++..|+|||.+.+...++.++|+||||+++|+|++|+.||...+..+....+....                   ..  
T Consensus       159 ~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T cd05118         159 VVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFP  238 (283)
T ss_pred             cCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhc
Confidence            578899999999876457899999999999999999999998776554443332110                   00  


Q ss_pred             ---------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         227 ---------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       227 ---------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                               ..+.++.++.++|.+||+.||.+||++.+++.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         239 KKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             cccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence                     012357889999999999999999999999999997


No 308
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00  E-value=1.2e-39  Score=321.94  Aligned_cols=247  Identities=26%  Similarity=0.414  Sum_probs=206.9

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      .++|++.+.||+|++|.||+|.+..+ ..+|+|.+.....  ....+.+|+.++++++|||++++++++. .+..++|||
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e   80 (260)
T cd05069           5 RESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM--MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTE   80 (260)
T ss_pred             hHHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc--cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEE
Confidence            47899999999999999999987654 4699998765432  2356788999999999999999999875 456899999


Q ss_pred             ccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          87 YCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        87 ~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |+++++|.+++...  ..+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++...........
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~  160 (260)
T cd05069          81 FMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTAR  160 (260)
T ss_pred             cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCccccc
Confidence            99999999999764  3478999999999999999999999999999999999999999999999999875533221112


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCChHHHHHHHHc
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQIVRSM  242 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~~  242 (568)
                      ....++..|+|||.+.+.. ++.++||||||+++|+|++ |..||.+....+....+..+. ...+...+..+.+++.+|
T Consensus       161 ~~~~~~~~y~~Pe~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  239 (260)
T cd05069         161 QGAKFPIKWTAPEAALYGR-FTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMPCPQGCPESLHELMKLC  239 (260)
T ss_pred             CCCccchhhCCHHHhccCC-cChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccCHHHHHHHHHH
Confidence            2234567899999987766 5889999999999999999 999998887777777766552 334556789999999999


Q ss_pred             cccCcCCCCCHHHHhc
Q psy6203         243 LQVEPGKRIKIQDLLG  258 (568)
Q Consensus       243 L~~dP~~Rps~~ell~  258 (568)
                      |..||++||+++++++
T Consensus       240 l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         240 WKKDPDERPTFEYIQS  255 (260)
T ss_pred             ccCCcccCcCHHHHHH
Confidence            9999999999999874


No 309
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk 
Probab=100.00  E-value=1e-39  Score=321.52  Aligned_cols=243  Identities=24%  Similarity=0.496  Sum_probs=211.6

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      .++|++.+.||+|+||.||+|..  .|+.||+|.+.....  ....+.+|+.+++.++|+||+++++++.+.+..++|||
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   80 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTE   80 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEE
Confidence            36789999999999999999986  478999999875542  45678889999999999999999999998899999999


Q ss_pred             ccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          87 YCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        87 ~~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |+++++|.+++....  .+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||.+.......    
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~----  156 (256)
T cd05039          81 YMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ----  156 (256)
T ss_pred             ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccccc----
Confidence            999999999998765  79999999999999999999999999999999999999999999999999987653221    


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCChHHHHHHHHc
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSM  242 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~li~~~  242 (568)
                      ....++..|+|||.+.+.. ++.++||||||+++|+|++ |..||...+...+...+..+ ....+...++.+.++|.+|
T Consensus       157 ~~~~~~~~~~ape~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  235 (256)
T cd05039         157 DSGKLPVKWTAPEALREKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEAPEGCPPEVYKVMKDC  235 (256)
T ss_pred             ccCCCcccccCchhhcCCc-CCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCccCCCHHHHHHHHHH
Confidence            1233466799999987665 5889999999999999997 99999988888777776654 3334556789999999999


Q ss_pred             cccCcCCCCCHHHHhc
Q psy6203         243 LQVEPGKRIKIQDLLG  258 (568)
Q Consensus       243 L~~dP~~Rps~~ell~  258 (568)
                      |..+|++|||+.+++.
T Consensus       236 l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         236 WELDPAKRPTFKQLRE  251 (256)
T ss_pred             hccChhhCcCHHHHHH
Confidence            9999999999999975


No 310
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00  E-value=4.1e-40  Score=326.25  Aligned_cols=249  Identities=29%  Similarity=0.457  Sum_probs=210.2

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--chHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ++|++.+.||+|+||.||+|.+..++..+|+|.+......+  ....+.+|+.+++.++||||+++++++...+..++||
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   81 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL   81 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence            57899999999999999999999999999999887543222  2356788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          86 EYCPGGELLDHIVE----RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        86 E~~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      ||+++++|.+++..    ...+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++....... 
T Consensus        82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-  160 (267)
T cd08229          82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT-  160 (267)
T ss_pred             EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC-
Confidence            99999999998863    3568999999999999999999999999999999999999999999999999887554321 


Q ss_pred             cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCH--HHHHHHHHcCCCCC--CCCCChHHHH
Q psy6203         162 SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSI--DQLYDKILNGKYTE--PPWMSPNSRQ  237 (568)
Q Consensus       162 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~--~~~~~~i~~~~~~~--~~~~~~~~~~  237 (568)
                      .......|+..|+|||.+.+.. ++.++|+||||+++|+|++|..||.+...  ......+....+..  +...++.+.+
T Consensus       161 ~~~~~~~~~~~~~ape~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (267)
T cd08229         161 TAAHSLVGTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQ  239 (267)
T ss_pred             cccccccCCcCccCHHHhcCCC-ccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHH
Confidence            2223456899999999997766 58899999999999999999999975533  34445554443332  2347889999


Q ss_pred             HHHHccccCcCCCCCHHHHhc
Q psy6203         238 IVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       238 li~~~L~~dP~~Rps~~ell~  258 (568)
                      ++.+||+.||++|||+.+|++
T Consensus       240 li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         240 LVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             HHHHhcCCCcccCCCHHHHHH
Confidence            999999999999999998764


No 311
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00  E-value=7.8e-40  Score=325.13  Aligned_cols=249  Identities=23%  Similarity=0.357  Sum_probs=207.9

Q ss_pred             eEEEeeecccCCeEEEEEEEcCC---CcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCE-----
Q psy6203          10 YILERTVGSGGFAKVKLATHVLT---GEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSH-----   80 (568)
Q Consensus        10 Y~i~~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~-----   80 (568)
                      |++.+.||+|+||.||+|....+   +..||+|.++..... .....+.+|+.+++.++||||+++++++...+.     
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            67899999999999999987653   478999998754332 234578889999999999999999998765443     


Q ss_pred             -EEEEEeccCCCChHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCc
Q psy6203          81 -IFMVIEYCPGGELLDHIVER------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC  153 (568)
Q Consensus        81 -~~lV~E~~~~g~L~~~i~~~------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a  153 (568)
                       .++||||+++|+|..++...      ..+++..+..++.|++.||.|||++||+||||||+||++++++.+||+|||++
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~  160 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLS  160 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccce
Confidence             79999999999999888542      36899999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCCcc-ccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCCC
Q psy6203         154 AKPEGGLES-QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-TEPPW  230 (568)
Q Consensus       154 ~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~~~~~  230 (568)
                      +........ ......++..|+|||.+.+.. ++.++|||||||++|+|++ |..||.+.+..+..+.+..+.. ..+..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  239 (273)
T cd05035         161 KKIYSGDYYRQGRIAKMPVKWIAIESLADRV-YTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRLKQPED  239 (273)
T ss_pred             eeccccccccccccccCCccccCHhhcccCC-CCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcC
Confidence            764432111 111223567899999987665 5899999999999999999 9999988888888777776543 45667


Q ss_pred             CChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         231 MSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       231 ~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      .++.+.+++.+||+.||++|||+.|++.+
T Consensus       240 ~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         240 CLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            88999999999999999999999999864


No 312
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00  E-value=7.7e-40  Score=328.84  Aligned_cols=249  Identities=28%  Similarity=0.419  Sum_probs=210.9

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcC-----CCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVL-----TGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIF   82 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   82 (568)
                      .+|.+.+.||+|+||.||+|.+..     ++..+++|.+..... .....+.+|+.++++++||||+++++++...+..+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTL-AARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLI   83 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccH-HHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceE
Confidence            469999999999999999998643     455688998764332 22356888999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeE
Q psy6203          83 MVIEYCPGGELLDHIVER----------------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLK  146 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~----------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~k  146 (568)
                      +||||+++++|.+++...                +.+++..+..++.||+.||+|||++||+||||||+||+++.++.++
T Consensus        84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~  163 (291)
T cd05094          84 MVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVK  163 (291)
T ss_pred             EEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEE
Confidence            999999999999999754                2378999999999999999999999999999999999999999999


Q ss_pred             EEeecCccCCCCCCc-cccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC
Q psy6203         147 LIDFGLCAKPEGGLE-SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK  224 (568)
Q Consensus       147 l~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~  224 (568)
                      |+|||++........ .......++..|+|||.+.+.. ++.++|||||||++|+|++ |..||...+..+..+.+..+.
T Consensus       164 l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~  242 (291)
T cd05094         164 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRK-FTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGR  242 (291)
T ss_pred             ECCCCcccccCCCceeecCCCCCcceeecChHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCC
Confidence            999999875433211 1122345678899999988765 5889999999999999998 999998888877777777766


Q ss_pred             CC-CCCCCChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         225 YT-EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       225 ~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      .. .+...+..+.+++.+||+.||++|||+.++++
T Consensus       243 ~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         243 VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             CCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            54 34456889999999999999999999999975


No 313
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00  E-value=8.3e-40  Score=330.74  Aligned_cols=253  Identities=24%  Similarity=0.440  Sum_probs=212.8

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEc-------CCCcEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEe
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHV-------LTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIET   77 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~-------~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~   77 (568)
                      ..++|.+.+.||+|+||.||+|++.       .++..||+|.+...........+.+|+.+++.+ +||||+++++++..
T Consensus        13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~   92 (304)
T cd05101          13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   92 (304)
T ss_pred             cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence            3568999999999999999999753       234579999987543334456788999999999 79999999999999


Q ss_pred             CCEEEEEEeccCCCChHHHHHhc----------------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcC
Q psy6203          78 SSHIFMVIEYCPGGELLDHIVER----------------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR  141 (568)
Q Consensus        78 ~~~~~lV~E~~~~g~L~~~i~~~----------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~  141 (568)
                      .+..|+||||+++|+|.+++...                ..++...+..++.||+.||.|||++||+||||||+||+++.
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~  172 (304)
T cd05101          93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTE  172 (304)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcC
Confidence            99999999999999999999764                24677889999999999999999999999999999999999


Q ss_pred             CCCeEEEeecCccCCCCCCcc-ccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHH
Q psy6203         142 NQNLKLIDFGLCAKPEGGLES-QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK  219 (568)
Q Consensus       142 ~~~~kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~  219 (568)
                      ++.+||+|||++......... ......+++.|+|||++.+.. ++.++||||||+++|+|++ |..||.+.+..++...
T Consensus       173 ~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~  251 (304)
T cd05101         173 NNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL  251 (304)
T ss_pred             CCcEEECCCccceecccccccccccCCCCCceeeCchhhccCC-CCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHH
Confidence            999999999998765332111 122234567899999997765 5889999999999999998 8899999888888888


Q ss_pred             HHcCCC-CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         220 ILNGKY-TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       220 i~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      +..+.. ..+...+..+.+|+.+||+.+|.+|||+.|++..
T Consensus       252 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         252 LKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             HHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            766543 3445678999999999999999999999999864


No 314
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00  E-value=1.2e-39  Score=326.10  Aligned_cols=250  Identities=30%  Similarity=0.423  Sum_probs=200.0

Q ss_pred             ccCe-EEEeeecccCCeEEEEEE----EcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeC--C
Q psy6203           7 RNQY-ILERTVGSGGFAKVKLAT----HVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETS--S   79 (568)
Q Consensus         7 ~~~Y-~i~~~lG~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~--~   79 (568)
                      .++| ++.+.||+|+||+||++.    ...++..||+|+++..........+.+|+.++++++||||+++++++...  .
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   81 (283)
T cd05080           2 HKRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGK   81 (283)
T ss_pred             ChhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCc
Confidence            4666 999999999999998864    34567899999987654333445678899999999999999999987653  4


Q ss_pred             EEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCC
Q psy6203          80 HIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGG  159 (568)
Q Consensus        80 ~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  159 (568)
                      ..++||||+++++|.+++.. ..+++.++..++.|++.||.|||++||+||||||+||+++.++.++|+|||++......
T Consensus        82 ~~~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~  160 (283)
T cd05080          82 GLQLIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG  160 (283)
T ss_pred             eEEEEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCc
Confidence            68999999999999999865 46999999999999999999999999999999999999999999999999998765432


Q ss_pred             Ccc--ccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHH---------------HHHHHHHc
Q psy6203         160 LES--QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID---------------QLYDKILN  222 (568)
Q Consensus       160 ~~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~---------------~~~~~i~~  222 (568)
                      ...  ......++..|+|||.+.+.. ++.++||||||+++|+|++|..||......               .....+..
T Consensus       161 ~~~~~~~~~~~~~~~~~~PE~~~~~~-~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (283)
T cd05080         161 HEYYRVREDGDSPVFWYAVECLKENK-FSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLER  239 (283)
T ss_pred             chhhccCCCCCCCceeeCHhHhcccC-CCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhc
Confidence            111  112234566799999987765 588999999999999999999998543211               11111111


Q ss_pred             C-CCCCCCCCChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         223 G-KYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       223 ~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      + ..+.+...+..+.+++.+||+.||++|||+++++.
T Consensus       240 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         240 GMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             CCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            1 12234557889999999999999999999999985


No 315
>KOG0193|consensus
Probab=100.00  E-value=2.6e-41  Score=342.72  Aligned_cols=247  Identities=26%  Similarity=0.423  Sum_probs=210.8

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      +...++..||+|+||+||+|++.   -.||||+++..... +..+.|++|+.++++-+|.||+-+.+++..++. .||+.
T Consensus       392 ~ev~l~~rIGsGsFGtV~Rg~wh---GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiTq  467 (678)
T KOG0193|consen  392 EEVLLGERIGSGSFGTVYRGRWH---GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIITQ  467 (678)
T ss_pred             HHhhccceeccccccceeecccc---cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeeeh
Confidence            45678899999999999999975   35999999876654 356789999999999999999999999988776 89999


Q ss_pred             ccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCC-CCcccc
Q psy6203          87 YCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEG-GLESQL  164 (568)
Q Consensus        87 ~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~-~~~~~~  164 (568)
                      +|+|.+|+.++.- +.+|.....+.|++||+.|+.|||.++|||||||..||++.++++|||+|||++..... ......
T Consensus       468 wCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~  547 (678)
T KOG0193|consen  468 WCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQL  547 (678)
T ss_pred             hccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeecccccc
Confidence            9999999999974 45788899999999999999999999999999999999999999999999999863221 223345


Q ss_pred             ccccCCccccccccccC--cccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC-----CCCCChHHHH
Q psy6203         165 QTSCGSPNYAAPEVIKG--KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE-----PPWMSPNSRQ  237 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~  237 (568)
                      ....|...|||||++..  .-.|++.+||||||+++|||++|..||...+.++++-++-.|....     ....+.++++
T Consensus       548 ~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~  627 (678)
T KOG0193|consen  548 EQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKR  627 (678)
T ss_pred             CCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHH
Confidence            56678999999999863  2347999999999999999999999999888887776666664332     2235669999


Q ss_pred             HHHHccccCcCCCCCHHHHhc
Q psy6203         238 IVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       238 li~~~L~~dP~~Rps~~ell~  258 (568)
                      |+..||.+++++||...+||.
T Consensus       628 Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  628 LLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             HHHHHHhcCcccCccHHHHHH
Confidence            999999999999999999887


No 316
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00  E-value=5.7e-40  Score=329.93  Aligned_cols=254  Identities=25%  Similarity=0.449  Sum_probs=214.1

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEecc
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYC   88 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~   88 (568)
                      .|....+||+|+||.||++.+..+|+.||+|.+.... ......+.+|+.+++.++||||+++++.+...+..++||||+
T Consensus        21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   99 (292)
T cd06657          21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL   99 (292)
T ss_pred             HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc-hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecC
Confidence            3444578999999999999999999999999875432 223456888999999999999999999999999999999999


Q ss_pred             CCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccccc
Q psy6203          89 PGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSC  168 (568)
Q Consensus        89 ~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  168 (568)
                      ++++|.+++. ...+++..+..++.|++.||+|||+.|++||||+|+||+++.++.++|+|||++....... .......
T Consensus       100 ~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~-~~~~~~~  177 (292)
T cd06657         100 EGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-PRRKSLV  177 (292)
T ss_pred             CCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccc-ccccccc
Confidence            9999988764 4578999999999999999999999999999999999999999999999999876543321 1223346


Q ss_pred             CCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC---CCCCCCChHHHHHHHHcccc
Q psy6203         169 GSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY---TEPPWMSPNSRQIVRSMLQV  245 (568)
Q Consensus       169 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~li~~~L~~  245 (568)
                      |++.|+|||.+.+.. ++.++|+||+|+++|+|++|..||.+.+..+....+.....   .....+++.+.+++.+||+.
T Consensus       178 ~~~~y~~pE~~~~~~-~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~  256 (292)
T cd06657         178 GTPYWMAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVR  256 (292)
T ss_pred             cCccccCHHHhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhC
Confidence            889999999987655 58899999999999999999999988776655555543322   22345788999999999999


Q ss_pred             CcCCCCCHHHHhcCcccccCC
Q psy6203         246 EPGKRIKIQDLLGHNWVKMGP  266 (568)
Q Consensus       246 dP~~Rps~~ell~hp~~~~~~  266 (568)
                      ||.+||++.+++.||||....
T Consensus       257 ~P~~R~~~~~ll~~~~~~~~~  277 (292)
T cd06657         257 DPAQRATAAELLKHPFLAKAG  277 (292)
T ss_pred             CcccCcCHHHHhcChHHhccC
Confidence            999999999999999998543


No 317
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00  E-value=1.8e-39  Score=331.76  Aligned_cols=254  Identities=30%  Similarity=0.478  Sum_probs=209.6

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEe-CCEEE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIET-SSHIF   82 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~-~~~~~   82 (568)
                      .+.++|++.+.||.|+||.||+|.+..+|+.||+|++.+.... .....+..|+.+++.++||||+++++++.. .+..|
T Consensus         7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~   86 (328)
T cd07856           7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIY   86 (328)
T ss_pred             ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEE
Confidence            4678999999999999999999999999999999988654322 234567789999999999999999999865 56789


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc
Q psy6203          83 MVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES  162 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  162 (568)
                      +||||+ +++|.+++. ...+++..+..++.||++||.|||++||+||||+|+||+++.++.++|+|||.+.....    
T Consensus        87 lv~e~~-~~~L~~~~~-~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~----  160 (328)
T cd07856          87 FVTELL-GTDLHRLLT-SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDP----  160 (328)
T ss_pred             EEeehh-ccCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCC----
Confidence            999999 668887775 45688999999999999999999999999999999999999999999999999875432    


Q ss_pred             ccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc---------------C----
Q psy6203         163 QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN---------------G----  223 (568)
Q Consensus       163 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~---------------~----  223 (568)
                      ......+++.|+|||.+.+...++.++|||||||++|+|++|..||...........+.+               +    
T Consensus       161 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (328)
T cd07856         161 QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLR  240 (328)
T ss_pred             CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHH
Confidence            223446788999999987645578999999999999999999999977654322111110               0    


Q ss_pred             -------CCC-----CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         224 -------KYT-----EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       224 -------~~~-----~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                             ...     ..+.+++.+.++|.+||+.+|++|||+++++.||||..
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~  293 (328)
T cd07856         241 FVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAP  293 (328)
T ss_pred             HHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcccc
Confidence                   000     01246789999999999999999999999999999974


No 318
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00  E-value=1e-39  Score=323.89  Aligned_cols=250  Identities=24%  Similarity=0.377  Sum_probs=210.1

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCc---EEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGE---KVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      +.|++.+.||+|+||.||+|.+..+++   .||+|++...........+..|+.+++.++||||+++++++.+.+..++|
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv   83 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII   83 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence            569999999999999999999887765   59999987543333356788899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc-
Q psy6203          85 IEYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES-  162 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~-  162 (568)
                      |||+++++|.+++... +.+++.++..++.|++.||.|||++|++||||||+||+++.++.+||+|||++......... 
T Consensus        84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~  163 (269)
T cd05065          84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP  163 (269)
T ss_pred             EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCcccc
Confidence            9999999999998763 56899999999999999999999999999999999999999999999999998654332111 


Q ss_pred             cccccc---CCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCChHHHH
Q psy6203         163 QLQTSC---GSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQ  237 (568)
Q Consensus       163 ~~~~~~---gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~  237 (568)
                      ......   .+..|+|||.+.+.. ++.++|||||||++|+|++ |..||...+.......+... ..+.+...+..+.+
T Consensus       164 ~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  242 (269)
T cd05065         164 TYTSSLGGKIPIRWTAPEAIAYRK-FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPMDCPTALHQ  242 (269)
T ss_pred             ccccccCCCcceeecCHhHhccCc-ccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCcccCCHHHHH
Confidence            111111   245799999998766 5889999999999999886 99999888877777776544 23445567889999


Q ss_pred             HHHHccccCcCCCCCHHHHhc
Q psy6203         238 IVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       238 li~~~L~~dP~~Rps~~ell~  258 (568)
                      ++.+||+.+|.+||++++++.
T Consensus       243 li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         243 LMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             HHHHHcCCChhhCcCHHHHHH
Confidence            999999999999999999975


No 319
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00  E-value=5.3e-40  Score=326.36  Aligned_cols=249  Identities=25%  Similarity=0.387  Sum_probs=206.4

Q ss_pred             eEEEeeecccCCeEEEEEEEcCCCc--EEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeC------CE
Q psy6203          10 YILERTVGSGGFAKVKLATHVLTGE--KVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETS------SH   80 (568)
Q Consensus        10 Y~i~~~lG~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~------~~   80 (568)
                      |.+++.||+|+||.||+|....++.  .+|+|.++..... .....+..|+.+++.++||||+++++++...      ..
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence            3578999999999999999877765  6899988764322 2345678899999999999999999976422      25


Q ss_pred             EEEEEeccCCCChHHHHHh------cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCcc
Q psy6203          81 IFMVIEYCPGGELLDHIVE------RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCA  154 (568)
Q Consensus        81 ~~lV~E~~~~g~L~~~i~~------~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  154 (568)
                      .++||||+++|+|.+++..      ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~  160 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSK  160 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCccc
Confidence            6899999999999988743      2347899999999999999999999999999999999999999999999999987


Q ss_pred             CCCCCCcc-ccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCCCC
Q psy6203         155 KPEGGLES-QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-TEPPWM  231 (568)
Q Consensus       155 ~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~~~~~~  231 (568)
                      ........ ......+++.|+|||.+.+.. ++.++|||||||++|+|++ |..||.+....+....+..+.. ..++..
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  239 (272)
T cd05075         161 KIYNGDYYRQGRIAKMPVKWIAIESLADRV-YTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRLKQPPDC  239 (272)
T ss_pred             ccCcccceecCCcccCCcccCCHHHccCCC-cChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Confidence            65432111 112234577899999998765 5899999999999999999 8999988888787777777643 445668


Q ss_pred             ChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         232 SPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       232 ~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      +..+.++|.+||+.||++|||+++++++
T Consensus       240 ~~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         240 LDGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            8899999999999999999999999864


No 320
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00  E-value=6.8e-40  Score=329.03  Aligned_cols=249  Identities=27%  Similarity=0.438  Sum_probs=208.6

Q ss_pred             CeEEEeeecccCCeEEEEEEEcC-----CCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVL-----TGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFM   83 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l   83 (568)
                      +|++.+.||+|+||.||+|.+..     ....+|+|.+...........+.+|+.+++.++||||+++++.+...+..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            58899999999999999998753     2356888888754433335578889999999999999999999999999999


Q ss_pred             EEeccCCCChHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEE
Q psy6203          84 VIEYCPGGELLDHIVER------------------------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLL  139 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~~------------------------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll  139 (568)
                      ||||+.+++|.+++...                        ..+++..+..++.|++.||.|||++||+||||||+||++
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill  160 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV  160 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEE
Confidence            99999999999998642                        247788999999999999999999999999999999999


Q ss_pred             cCCCCeEEEeecCccCCCCCCcc-ccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHH
Q psy6203         140 DRNQNLKLIDFGLCAKPEGGLES-QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLY  217 (568)
Q Consensus       140 ~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~  217 (568)
                      ++++.+||+|||++......... ......++..|+|||.+.+.. ++.++||||||+++|+|++ |..||.+.....+.
T Consensus       161 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~  239 (290)
T cd05045         161 AEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLF  239 (290)
T ss_pred             cCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCC-cchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHH
Confidence            99999999999998754322111 112234567899999987665 5899999999999999998 99999988888877


Q ss_pred             HHHHcC-CCCCCCCCChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         218 DKILNG-KYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       218 ~~i~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      +.+..+ ....+...+.++.+++.+||+.||++||++.++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         240 NLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             HHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            776654 23345568899999999999999999999999975


No 321
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including 
Probab=100.00  E-value=5.8e-40  Score=330.42  Aligned_cols=251  Identities=22%  Similarity=0.329  Sum_probs=204.8

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCC--------------cEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceee
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTG--------------EKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLF   72 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~--------------~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~   72 (568)
                      .++|++.+.||+|+||.||+|++..++              ..||+|.+...........+.+|++++++++||||++++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~   83 (295)
T cd05097           4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL   83 (295)
T ss_pred             hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence            468999999999999999999875432              358999987543323345688899999999999999999


Q ss_pred             EEEEeCCEEEEEEeccCCCChHHHHHhcC------------CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEc
Q psy6203          73 QVIETSSHIFMVIEYCPGGELLDHIVERQ------------RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLD  140 (568)
Q Consensus        73 ~~~~~~~~~~lV~E~~~~g~L~~~i~~~~------------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~  140 (568)
                      +++...+..++||||+++++|.+++....            .+++..+..++.|++.||.|||++|++||||||+||+++
T Consensus        84 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~  163 (295)
T cd05097          84 GVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVG  163 (295)
T ss_pred             EEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEc
Confidence            99999999999999999999999986532            367888999999999999999999999999999999999


Q ss_pred             CCCCeEEEeecCccCCCCCCc-cccccccCCccccccccccCcccCCcccceechhhHHHHHHh--CCCCCCCCCHHHHH
Q psy6203         141 RNQNLKLIDFGLCAKPEGGLE-SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC--GFLPFDSDSIDQLY  217 (568)
Q Consensus       141 ~~~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt--G~~pf~~~~~~~~~  217 (568)
                      .++.+||+|||++........ .......++..|+|||++.+.. ++.++|||||||++|+|++  |..||...+..+..
T Consensus       164 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~  242 (295)
T cd05097         164 NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGK-FTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVI  242 (295)
T ss_pred             CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCC-cCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHH
Confidence            999999999999875432211 1112234567899999988766 5899999999999999988  67888877666554


Q ss_pred             HHHHc-----C---CCCCCCCCChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         218 DKILN-----G---KYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       218 ~~i~~-----~---~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      ..+..     +   ....++..++.+.+|+.+||+.||++|||++++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         243 ENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             HHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            44321     1   12234557899999999999999999999999964


No 322
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00  E-value=1.2e-39  Score=320.59  Aligned_cols=248  Identities=25%  Similarity=0.426  Sum_probs=213.5

Q ss_pred             eEEEeeecccCCeEEEEEEEcCCC----cEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203          10 YILERTVGSGGFAKVKLATHVLTG----EKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus        10 Y~i~~~lG~G~~g~V~~~~~~~~~----~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      +++.+.||.|+||.||+|.+..++    ..||+|++...........+..|+.+++.++|+||+++++++.+.+..+++|
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~   80 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM   80 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence            357899999999999999998766    8999999976544335668889999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          86 EYCPGGELLDHIVERQR--LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~--l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      ||+++++|.+++.....  +++..+..++.|++.||.+||+.|++|+||||+||+++.++.++|+|||++..........
T Consensus        81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~  160 (258)
T smart00219       81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYK  160 (258)
T ss_pred             eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccccc
Confidence            99999999999976544  9999999999999999999999999999999999999999999999999987654331111


Q ss_pred             cccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCC-CCCCCChHHHHHHHH
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNSRQIVRS  241 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~li~~  241 (568)
                      .....+++.|+|||.+.+.. ++.++||||||+++|+|++ |.+||...+.....+.+..+... .+...+.++.+++.+
T Consensus       161 ~~~~~~~~~y~~Pe~~~~~~-~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  239 (258)
T smart00219      161 KKGGKLPIRWMAPESLKDGK-FTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLPKPENCPPEIYKLMLQ  239 (258)
T ss_pred             cccCCCcccccChHHhccCC-CCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHH
Confidence            11223678999999986554 6899999999999999998 89999888888888777766543 445578999999999


Q ss_pred             ccccCcCCCCCHHHHhc
Q psy6203         242 MLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       242 ~L~~dP~~Rps~~ell~  258 (568)
                      ||..||++|||+.|+++
T Consensus       240 ~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      240 CWAEDPEDRPTFSELVE  256 (258)
T ss_pred             HCcCChhhCcCHHHHHh
Confidence            99999999999999985


No 323
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored 
Probab=100.00  E-value=1.3e-39  Score=323.03  Aligned_cols=250  Identities=24%  Similarity=0.394  Sum_probs=211.0

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCc---EEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGE---KVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      ++|+..+.||+|+||.||+|.+..++.   .+|+|.+...........+..|+.++++++||||+++++++...+..|+|
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   84 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMII   84 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEEE
Confidence            578999999999999999999876665   69999886543333355688899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          85 IEYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      |||+++++|.+++... +.+++..+..++.|++.||+|||+.|++||||||+||+++.++.+||+|||++..........
T Consensus        85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~  164 (268)
T cd05063          85 TEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGT  164 (268)
T ss_pred             EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccccc
Confidence            9999999999998764 578999999999999999999999999999999999999999999999999987554321111


Q ss_pred             ccc--ccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCChHHHHHH
Q psy6203         164 LQT--SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-TEPPWMSPNSRQIV  239 (568)
Q Consensus       164 ~~~--~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li  239 (568)
                      ...  ...+..|+|||++.+.. ++.++|||||||++|+|++ |..||...+.......+..+.. +.+...+..+.+++
T Consensus       165 ~~~~~~~~~~~y~~PE~~~~~~-~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li  243 (268)
T cd05063         165 YTTSGGKIPIRWTAPEAIAYRK-FTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPMDCPSAVYQLM  243 (268)
T ss_pred             eeccCCCcCceecCHHHhhcCC-cChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCCCCCHHHHHHH
Confidence            111  12345799999998765 5889999999999999997 9999988887777777765532 33445788999999


Q ss_pred             HHccccCcCCCCCHHHHhc
Q psy6203         240 RSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       240 ~~~L~~dP~~Rps~~ell~  258 (568)
                      .+||+.+|++||++.++++
T Consensus       244 ~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         244 LQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             HHHcCCCcccCcCHHHHHH
Confidence            9999999999999999975


No 324
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00  E-value=6.6e-40  Score=328.75  Aligned_cols=251  Identities=24%  Similarity=0.366  Sum_probs=211.6

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcC-----CCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVL-----TGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHI   81 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~   81 (568)
                      .++|++.+.||+|+||.||+|.+..     ++..||+|++...........+.+|+.++++++||||+++++++...+..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~   83 (288)
T cd05050           4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM   83 (288)
T ss_pred             hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence            5789999999999999999998753     67889999987544333345688899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcC----------------------CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEE
Q psy6203          82 FMVIEYCPGGELLDHIVERQ----------------------RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLL  139 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~~----------------------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll  139 (568)
                      ++||||+++++|.+++....                      .+++..+..++.||+.||.|||++|++||||||+||++
T Consensus        84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~  163 (288)
T cd05050          84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLV  163 (288)
T ss_pred             EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEe
Confidence            99999999999999997532                      36788899999999999999999999999999999999


Q ss_pred             cCCCCeEEEeecCccCCCCCCc-cccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHH
Q psy6203         140 DRNQNLKLIDFGLCAKPEGGLE-SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLY  217 (568)
Q Consensus       140 ~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~  217 (568)
                      +.++.++|+|||++........ .......++..|+|||.+.+.. ++.++|||||||++|+|++ |..||.+.+..+..
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~  242 (288)
T cd05050         164 GENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNR-YTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVI  242 (288)
T ss_pred             cCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence            9999999999999865432211 1112223466799999987765 5889999999999999997 88899888888877


Q ss_pred             HHHHcCCCC-CCCCCChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         218 DKILNGKYT-EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       218 ~~i~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      ..+..+... .+...+.++.+|+.+||+.||++|||+.|+++
T Consensus       243 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         243 YYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             HHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            777766543 35567899999999999999999999999874


No 325
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00  E-value=1.6e-39  Score=330.59  Aligned_cols=254  Identities=30%  Similarity=0.389  Sum_probs=214.5

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIF   82 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   82 (568)
                      +....|...+.||+|+||.||+|.+..++..||+|.+......  +....+..|+.++++++|||++++++++.+.+..+
T Consensus        22 ~~~~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~  101 (317)
T cd06635          22 DPEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAW  101 (317)
T ss_pred             CchhhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEE
Confidence            4556789999999999999999999999999999998754322  22456788999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          83 MVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      +||||+.| +|.+.+.. ..++++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||++.....   
T Consensus       102 lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~---  177 (317)
T cd06635         102 LVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP---  177 (317)
T ss_pred             EEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC---
Confidence            99999964 77777654 56789999999999999999999999999999999999999999999999998765432   


Q ss_pred             cccccccCCccccccccccC--cccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC--CCCCCChHHHH
Q psy6203         162 SQLQTSCGSPNYAAPEVIKG--KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPWMSPNSRQ  237 (568)
Q Consensus       162 ~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~  237 (568)
                        .....|++.|+|||.+.+  ...++.++|||||||++|+|++|..||...+.......+..+...  .....++.+.+
T Consensus       178 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  255 (317)
T cd06635         178 --ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRN  255 (317)
T ss_pred             --cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHH
Confidence              234468899999999742  233688999999999999999999999877665555555444332  23347888999


Q ss_pred             HHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         238 IVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       238 li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      ++.+||+.+|.+||++.+++.|+|+..
T Consensus       256 li~~~l~~~p~~Rpt~~~il~~~~~~~  282 (317)
T cd06635         256 FVDSCLQKIPQDRPTSEELLKHMFVLR  282 (317)
T ss_pred             HHHHHccCCcccCcCHHHHHhChhhhc
Confidence            999999999999999999999999974


No 326
>KOG0695|consensus
Probab=100.00  E-value=6.2e-41  Score=316.80  Aligned_cols=255  Identities=33%  Similarity=0.636  Sum_probs=230.0

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHI-SHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      ++|.++.+||+|+|++|.++++++|.+.||+|++++....  ++..-++.|-.+..+- +||.+|-++..|+++..+++|
T Consensus       250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlffv  329 (593)
T KOG0695|consen  250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFFV  329 (593)
T ss_pred             ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEEE
Confidence            5799999999999999999999999999999999987654  4566777787777665 699999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          85 IEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      .||++||+|--++..+.+++|+.++.+...|+.||.|||++||+.||||.+|+|++..|++||+|+|+++..... ....
T Consensus       330 ieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~-gd~t  408 (593)
T KOG0695|consen  330 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP-GDTT  408 (593)
T ss_pred             EEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCC-Cccc
Confidence            999999999999999999999999999999999999999999999999999999999999999999998865433 3456


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCC--------CCHHHHHHHHHcCCCCCCCCCChHHH
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS--------DSIDQLYDKILNGKYTEPPWMSPNSR  236 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~--------~~~~~~~~~i~~~~~~~~~~~~~~~~  236 (568)
                      .+.||||.|+|||++.|.. |+..+|.|+|||+++||+.|+.||+.        ++.+-+++-|.......|..+|-.+.
T Consensus       409 stfcgtpnyiapeilrgee-ygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprslsvkas  487 (593)
T KOG0695|consen  409 STFCGTPNYIAPEILRGEE-YGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLSVKAS  487 (593)
T ss_pred             ccccCCCcccchhhhcccc-cCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceeehhhH
Confidence            7899999999999999988 59999999999999999999999952        23455778888888889999999999


Q ss_pred             HHHHHccccCcCCCCC------HHHHhcCccccc
Q psy6203         237 QIVRSMLQVEPGKRIK------IQDLLGHNWVKM  264 (568)
Q Consensus       237 ~li~~~L~~dP~~Rps------~~ell~hp~~~~  264 (568)
                      .+++..|++||.+|..      ..++..|+||+.
T Consensus       488 ~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~  521 (593)
T KOG0695|consen  488 HVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRS  521 (593)
T ss_pred             HHHHHhhcCCcHHhcCCCcccchhhhhcchhhhh
Confidence            9999999999999964      789999999984


No 327
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00  E-value=1e-39  Score=328.70  Aligned_cols=251  Identities=22%  Similarity=0.336  Sum_probs=204.6

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcC----------------CCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcce
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVL----------------TGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICK   70 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~----------------~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~   70 (568)
                      .++|++.+.||+|+||.||+|.+..                ++..+|+|++...........+.+|+.+++.++||||++
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~   83 (296)
T cd05095           4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR   83 (296)
T ss_pred             hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence            5689999999999999999986532                344689999875433333457889999999999999999


Q ss_pred             eeEEEEeCCEEEEEEeccCCCChHHHHHhcC-----------CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEE
Q psy6203          71 LFQVIETSSHIFMVIEYCPGGELLDHIVERQ-----------RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLL  139 (568)
Q Consensus        71 l~~~~~~~~~~~lV~E~~~~g~L~~~i~~~~-----------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll  139 (568)
                      +++++...+..++||||+++++|.+++....           .+++..+..++.||+.||+|||+.|++||||||+||++
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili  163 (296)
T cd05095          84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLV  163 (296)
T ss_pred             EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEE
Confidence            9999999999999999999999999987642           36677899999999999999999999999999999999


Q ss_pred             cCCCCeEEEeecCccCCCCCCcc-ccccccCCccccccccccCcccCCcccceechhhHHHHHHh--CCCCCCCCCHHHH
Q psy6203         140 DRNQNLKLIDFGLCAKPEGGLES-QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC--GFLPFDSDSIDQL  216 (568)
Q Consensus       140 ~~~~~~kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt--G~~pf~~~~~~~~  216 (568)
                      +.++.++|+|||++......... ......+++.|+|||...+.. ++.++|||||||++|+|++  |..||...+..+.
T Consensus       164 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~  242 (296)
T cd05095         164 GKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGK-FTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQV  242 (296)
T ss_pred             cCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCC-ccchhhhhHHHHHHHHHHHhCCCCCccccChHHH
Confidence            99999999999998754332111 112233467899999887665 6899999999999999998  7899987665554


Q ss_pred             HHHHHc--------CCCCCCCCCChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         217 YDKILN--------GKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       217 ~~~i~~--------~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      ......        ...+.+...++.+.+|+.+||+.||.+|||+.++++
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         243 IENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             HHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            433211        122344567889999999999999999999999864


No 328
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00  E-value=1.7e-39  Score=319.76  Aligned_cols=248  Identities=25%  Similarity=0.398  Sum_probs=210.9

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      ++|++.+.||+|+||.||+|.+. .+..+|+|.+.....  ....+.+|++++++++||||+++++++......++||||
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~   80 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAM--SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEF   80 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCC--CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEc
Confidence            47899999999999999999875 467899998875433  234688899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          88 CPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        88 ~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      +++++|.+++... +.++++.+..++.|++.||.|||+.|++||||||+||+++.++.++|+|||++.............
T Consensus        81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~  160 (256)
T cd05112          81 MEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTG  160 (256)
T ss_pred             CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCC
Confidence            9999999998764 568999999999999999999999999999999999999999999999999987543321111122


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCChHHHHHHHHccc
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-TEPPWMSPNSRQIVRSMLQ  244 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~L~  244 (568)
                      ..++..|+|||.+.+.. ++.++||||||+++|+|++ |..||.........+.+..+.. ..+...+..+.+|+.+||+
T Consensus       161 ~~~~~~~~aPe~~~~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~  239 (256)
T cd05112         161 TKFPVKWSSPEVFSFSK-YSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKPRLASQSVYELMQHCWK  239 (256)
T ss_pred             CccchhhcCHhHhccCC-cChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHcc
Confidence            23467899999998765 5889999999999999998 9999998888777777766533 3345578999999999999


Q ss_pred             cCcCCCCCHHHHhcC
Q psy6203         245 VEPGKRIKIQDLLGH  259 (568)
Q Consensus       245 ~dP~~Rps~~ell~h  259 (568)
                      .+|++|||+.+++++
T Consensus       240 ~~p~~Rp~~~~~l~~  254 (256)
T cd05112         240 ERPEDRPSFSLLLHQ  254 (256)
T ss_pred             cChhhCCCHHHHHHh
Confidence            999999999999864


No 329
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00  E-value=1.1e-39  Score=334.41  Aligned_cols=253  Identities=25%  Similarity=0.436  Sum_probs=211.9

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCC-------CcEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEe
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLT-------GEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIET   77 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~   77 (568)
                      ...+|++++.||+|+||.||+|++...       +..||+|.+...........+.+|+.+++++ +||||+++++++..
T Consensus        10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~   89 (334)
T cd05100          10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ   89 (334)
T ss_pred             CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc
Confidence            346799999999999999999986532       2368999887543333456788899999999 79999999999999


Q ss_pred             CCEEEEEEeccCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcC
Q psy6203          78 SSHIFMVIEYCPGGELLDHIVERQ----------------RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR  141 (568)
Q Consensus        78 ~~~~~lV~E~~~~g~L~~~i~~~~----------------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~  141 (568)
                      .+..++||||+++|+|.+++....                .++...+..++.||+.||.|||++||+||||||+||+++.
T Consensus        90 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~  169 (334)
T cd05100          90 DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTE  169 (334)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcC
Confidence            999999999999999999997532                3677888999999999999999999999999999999999


Q ss_pred             CCCeEEEeecCccCCCCCCcc-ccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHH
Q psy6203         142 NQNLKLIDFGLCAKPEGGLES-QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK  219 (568)
Q Consensus       142 ~~~~kl~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~  219 (568)
                      ++.+||+|||+++........ ......++..|+|||++.+.. ++.++|||||||++|+|++ |..||.+.+..+....
T Consensus       170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~  248 (334)
T cd05100         170 DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRV-YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL  248 (334)
T ss_pred             CCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCC-cCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            999999999998754332111 112223456799999998765 5889999999999999998 8999999888888887


Q ss_pred             HHcCCC-CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         220 ILNGKY-TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       220 i~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      +..+.. ..+...+..+.+++.+||+.+|++|||+.|++++
T Consensus       249 ~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         249 LKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             HHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            766543 3455678899999999999999999999999986


No 330
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00  E-value=1.5e-39  Score=320.62  Aligned_cols=242  Identities=22%  Similarity=0.339  Sum_probs=202.0

Q ss_pred             eecccCCeEEEEEEEc--CCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCCC
Q psy6203          15 TVGSGGFAKVKLATHV--LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGE   92 (568)
Q Consensus        15 ~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g~   92 (568)
                      .||+|+||.||+|.+.  .++..||+|++.........+.+.+|+.++++++||||++++++++ .+..++||||+++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            4899999999999765  3456799999876543333466889999999999999999999886 456899999999999


Q ss_pred             hHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc--cccccC
Q psy6203          93 LLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ--LQTSCG  169 (568)
Q Consensus        93 L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~--~~~~~g  169 (568)
                      |.+++.. ...+++..+..++.||+.||.|||++|++||||||+||+++.++.+||+|||++..........  .....+
T Consensus        81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~  160 (257)
T cd05115          81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKW  160 (257)
T ss_pred             HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCC
Confidence            9999875 4578999999999999999999999999999999999999999999999999987543321111  111223


Q ss_pred             CccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCChHHHHHHHHccccCc
Q psy6203         170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-TEPPWMSPNSRQIVRSMLQVEP  247 (568)
Q Consensus       170 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~L~~dP  247 (568)
                      ++.|+|||.+.+.. ++.++|||||||++|++++ |..||.......+...+..+.. ..+...++++.++|.+||..||
T Consensus       161 ~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~c~~~~~  239 (257)
T cd05115         161 PLKWYAPECINFRK-FSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCPAECPPEMYALMKDCWIYKW  239 (257)
T ss_pred             CcccCCHHHHccCC-CCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHcCCCh
Confidence            57899999987665 5889999999999999996 9999988887777777766543 4456678999999999999999


Q ss_pred             CCCCCHHHHhc
Q psy6203         248 GKRIKIQDLLG  258 (568)
Q Consensus       248 ~~Rps~~ell~  258 (568)
                      ++||++.++.+
T Consensus       240 ~~Rp~~~~i~~  250 (257)
T cd05115         240 EDRPNFAKVEE  250 (257)
T ss_pred             hhCcCHHHHHH
Confidence            99999999865


No 331
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00  E-value=1.4e-39  Score=327.81  Aligned_cols=257  Identities=28%  Similarity=0.398  Sum_probs=209.3

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCC-CCCcceeeEEEEeCCEEEE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS-HQHICKLFQVIETSSHIFM   83 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~~~l   83 (568)
                      --.++|++.+.||+|+||.||+|.+..+++.||+|.++..........+..|+.++.+.. ||||+++++++.+....|+
T Consensus        12 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~   91 (296)
T cd06618          12 ADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI   91 (296)
T ss_pred             CCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence            345789999999999999999999998899999999986544333445666777666664 9999999999999999999


Q ss_pred             EEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHH-cCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          84 VIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHH-LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      ||||+. ++|.+++.. ...+++..+..++.||+.||.|||+ .||+||||+|+||+++.++.+||+|||++....... 
T Consensus        92 v~e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~-  169 (296)
T cd06618          92 CMELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK-  169 (296)
T ss_pred             EeeccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC-
Confidence            999984 577777655 4578999999999999999999997 599999999999999999999999999987543321 


Q ss_pred             cccccccCCccccccccccCcc---cCCcccceechhhHHHHHHhCCCCCCCCCH-HHHHHHHHcCCCC-CC--CCCChH
Q psy6203         162 SQLQTSCGSPNYAAPEVIKGKQ---YYGSETDVWSMGVMLYALLCGFLPFDSDSI-DQLYDKILNGKYT-EP--PWMSPN  234 (568)
Q Consensus       162 ~~~~~~~gt~~y~aPE~l~~~~---~~~~~~DiwSlG~il~~lltG~~pf~~~~~-~~~~~~i~~~~~~-~~--~~~~~~  234 (568)
                       ......+++.|+|||.+.+..   .++.++||||||+++|+|++|+.||..... .+....+...... .+  ..++.+
T Consensus       170 -~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (296)
T cd06618         170 -AKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPD  248 (296)
T ss_pred             -cccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHH
Confidence             112335788999999987542   357899999999999999999999976332 3344444443322 22  236889


Q ss_pred             HHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         235 SRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       235 ~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      +.+|+.+||..||.+|||+++++.||||..
T Consensus       249 l~~li~~~l~~~p~~Rp~~~~il~~~~~~~  278 (296)
T cd06618         249 FCSFVDLCLTKDHRKRPKYRELLQHPFIRR  278 (296)
T ss_pred             HHHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence            999999999999999999999999999983


No 332
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00  E-value=1.1e-39  Score=325.99  Aligned_cols=250  Identities=28%  Similarity=0.417  Sum_probs=209.6

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEc-----CCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHV-----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHI   81 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~   81 (568)
                      ..+|.+.++||+|+||.||+|...     .++..+|+|.+.... ......+.+|+.+++.++||||+++++++.+.+..
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   82 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPL   82 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC-HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCce
Confidence            357899999999999999999743     346689999876433 22345788899999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhcC---------------CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeE
Q psy6203          82 FMVIEYCPGGELLDHIVERQ---------------RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLK  146 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~~---------------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~k  146 (568)
                      ++||||+++++|.+++....               .+++..+..++.||+.||+|||++||+||||||+||++++++.+|
T Consensus        83 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~k  162 (280)
T cd05092          83 LMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVK  162 (280)
T ss_pred             EEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEE
Confidence            99999999999999997643               478899999999999999999999999999999999999999999


Q ss_pred             EEeecCccCCCCCCcc-ccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC
Q psy6203         147 LIDFGLCAKPEGGLES-QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK  224 (568)
Q Consensus       147 l~DFG~a~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~  224 (568)
                      |+|||++......... ......+++.|+|||.+.+.. ++.++|||||||++|+|++ |.+||...........+..+.
T Consensus       163 L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~  241 (280)
T cd05092         163 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRK-FTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGR  241 (280)
T ss_pred             ECCCCceeEcCCCceeecCCCccccccccCHHHhccCC-cCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCc
Confidence            9999998654322111 112233567899999988766 5899999999999999998 999998777766666666554


Q ss_pred             -CCCCCCCChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         225 -YTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       225 -~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                       ...+..+++.+.++|.+||+.||.+||++++++.
T Consensus       242 ~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         242 ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence             3445568899999999999999999999999974


No 333
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00  E-value=1.8e-39  Score=319.83  Aligned_cols=241  Identities=26%  Similarity=0.479  Sum_probs=206.4

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEE-EeCCEEEEEEe
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVI-ETSSHIFMVIE   86 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~-~~~~~~~lV~E   86 (568)
                      .+|++.+.||+|+||.||++..  .|..||+|.+....   ..+.+.+|+.++++++|+|++++++++ ...+..|+|||
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e   80 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE   80 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCc---hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEE
Confidence            5789999999999999999976  47889999986432   345688899999999999999999975 45567899999


Q ss_pred             ccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          87 YCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        87 ~~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |+++++|.+++.+..  .+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++......    .
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~----~  156 (256)
T cd05082          81 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST----Q  156 (256)
T ss_pred             CCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceecccc----C
Confidence            999999999997654  4789999999999999999999999999999999999999999999999998754322    1


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCChHHHHHHHHc
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-TEPPWMSPNSRQIVRSM  242 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~  242 (568)
                      ....++..|+|||++.+.. ++.++|||||||++|+|++ |+.||...+..++...+..+.. ..++..++.+.+++.+|
T Consensus       157 ~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  235 (256)
T cd05082         157 DTGKLPVKWTAPEALREKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCPPVVYDVMKQC  235 (256)
T ss_pred             CCCccceeecCHHHHccCC-CCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence            2334567899999987765 5889999999999999997 9999998888877777766532 34556889999999999


Q ss_pred             cccCcCCCCCHHHHhc
Q psy6203         243 LQVEPGKRIKIQDLLG  258 (568)
Q Consensus       243 L~~dP~~Rps~~ell~  258 (568)
                      |+.+|++|||+.++++
T Consensus       236 l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         236 WHLDAATRPSFLQLRE  251 (256)
T ss_pred             hcCChhhCcCHHHHHH
Confidence            9999999999999975


No 334
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the 
Probab=100.00  E-value=8.1e-40  Score=326.62  Aligned_cols=251  Identities=31%  Similarity=0.485  Sum_probs=211.6

Q ss_pred             eEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEecc
Q psy6203          10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYC   88 (568)
Q Consensus        10 Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~   88 (568)
                      |++.+.||+|++|.||+|.+..+++.||+|++...... .....+..|+.++++++||||+++++++.+.+..++||||+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~   80 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC   80 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence            67889999999999999999999999999999865422 23456778999999999999999999999999999999999


Q ss_pred             CCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccc
Q psy6203          89 PGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTS  167 (568)
Q Consensus        89 ~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~  167 (568)
                      + ++|.+++... ..+++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||.+....... ......
T Consensus        81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~-~~~~~~  158 (282)
T cd07829          81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPL-RTYTHE  158 (282)
T ss_pred             C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCc-cccCcc
Confidence            7 5899999876 579999999999999999999999999999999999999999999999999987654321 122334


Q ss_pred             cCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC--------------------CCC-
Q psy6203         168 CGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--------------------KYT-  226 (568)
Q Consensus       168 ~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~--------------------~~~-  226 (568)
                      .++..|+|||.+.+...++.++|||||||++|+|++|.+||.+.+.......+...                    .++ 
T Consensus       159 ~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (282)
T cd07829         159 VVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPK  238 (282)
T ss_pred             ccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccc
Confidence            56788999999877645789999999999999999999999887655444333210                    000 


Q ss_pred             --------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         227 --------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       227 --------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                              ..+..+..+.++|.+||..||++||++++++.||||
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         239 FPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             cCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence                    012247789999999999999999999999999997


No 335
>KOG0671|consensus
Probab=100.00  E-value=2.9e-41  Score=325.70  Aligned_cols=253  Identities=30%  Similarity=0.449  Sum_probs=209.0

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCC--C----CcceeeEEEEeC
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH--Q----HICKLFQVIETS   78 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~h--p----nIv~l~~~~~~~   78 (568)
                      .+.++|.+.+++|+|+||.|..+.+..++..||||+++...  .-.+....|+++|.++.+  |    -+|++.++|+-.
T Consensus        86 ~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~--kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr  163 (415)
T KOG0671|consen   86 ILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVD--KYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR  163 (415)
T ss_pred             ccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHH--HHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence            46899999999999999999999999999999999997543  233456679999999942  3    378888999999


Q ss_pred             CEEEEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcC---------------
Q psy6203          79 SHIFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR---------------  141 (568)
Q Consensus        79 ~~~~lV~E~~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~---------------  141 (568)
                      ++.|||+|.+ |-++++++.+++  +++...++.+.+|+++++++||+.+++|-||||+|||+.+               
T Consensus       164 ghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~  242 (415)
T KOG0671|consen  164 GHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCF  242 (415)
T ss_pred             CceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccce
Confidence            9999999999 779999998764  6889999999999999999999999999999999999842               


Q ss_pred             -----CCCeEEEeecCccCCCCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHH-
Q psy6203         142 -----NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQ-  215 (568)
Q Consensus       142 -----~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~-  215 (568)
                           +..|+|+|||.|+.....    ..+.+.|..|.|||++.+-+ ++.++||||+||||+|+.||...|.+.+..+ 
T Consensus       243 ~r~~ks~~I~vIDFGsAtf~~e~----hs~iVsTRHYRAPEViLgLG-wS~pCDvWSiGCIL~ElytG~~LFqtHen~EH  317 (415)
T KOG0671|consen  243 IRPLKSTAIKVIDFGSATFDHEH----HSTIVSTRHYRAPEVILGLG-WSQPCDVWSIGCILVELYTGETLFQTHENLEH  317 (415)
T ss_pred             eccCCCcceEEEecCCcceeccC----cceeeeccccCCchheeccC-cCCccCceeeeeEEEEeeccceecccCCcHHH
Confidence                 235899999998875433    25667899999999999987 6999999999999999999999998765433 


Q ss_pred             --HHHHHHcC------------------CCCCCCC-------------------------CChHHHHHHHHccccCcCCC
Q psy6203         216 --LYDKILNG------------------KYTEPPW-------------------------MSPNSRQIVRSMLQVEPGKR  250 (568)
Q Consensus       216 --~~~~i~~~------------------~~~~~~~-------------------------~~~~~~~li~~~L~~dP~~R  250 (568)
                        ++++|...                  ....+..                         ...++.|||++||.+||.+|
T Consensus       318 LaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~R  397 (415)
T KOG0671|consen  318 LAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARR  397 (415)
T ss_pred             HHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcccc
Confidence              45554331                  0110000                         11246799999999999999


Q ss_pred             CCHHHHhcCcccccC
Q psy6203         251 IKIQDLLGHNWVKMG  265 (568)
Q Consensus       251 ps~~ell~hp~~~~~  265 (568)
                      +|+.|+|.||||+..
T Consensus       398 iTl~EAL~HpFF~~~  412 (415)
T KOG0671|consen  398 ITLREALSHPFFARL  412 (415)
T ss_pred             ccHHHHhcCHHhhcC
Confidence            999999999999853


No 336
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00  E-value=1.9e-39  Score=322.28  Aligned_cols=252  Identities=27%  Similarity=0.421  Sum_probs=210.0

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCC---CcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLT---GEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIF   82 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   82 (568)
                      -.++|.+.+.||+|+||.||+|.+...   ...||+|...........+.+.+|+.++++++||||+++++++.+ +..|
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~   82 (270)
T cd05056           4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVW   82 (270)
T ss_pred             chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcE
Confidence            356799999999999999999987644   346899988654323344578889999999999999999999875 4578


Q ss_pred             EEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          83 MVIEYCPGGELLDHIVERQ-RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      +||||+++++|.+++.... .+++..+..++.|++.||.|||+.|++||||||+||+++.++.+||+|||++........
T Consensus        83 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~  162 (270)
T cd05056          83 IVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY  162 (270)
T ss_pred             EEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccc
Confidence            9999999999999997643 589999999999999999999999999999999999999999999999999875543321


Q ss_pred             cccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCChHHHHHH
Q psy6203         162 SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQIV  239 (568)
Q Consensus       162 ~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li  239 (568)
                      .......++..|+|||.+.+.. ++.++|||||||++|+|++ |..||...+..+....+..+. ...+...++.+.+++
T Consensus       163 ~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  241 (270)
T cd05056         163 YKASKGKLPIKWMAPESINFRR-FTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPMPPNCPPTLYSLM  241 (270)
T ss_pred             eecCCCCccccccChhhhccCC-CCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHH
Confidence            1112223456899999987665 5889999999999999986 999998888777776766654 345567889999999


Q ss_pred             HHccccCcCCCCCHHHHhcC
Q psy6203         240 RSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       240 ~~~L~~dP~~Rps~~ell~h  259 (568)
                      .+|+..+|++|||+.+++..
T Consensus       242 ~~~l~~~P~~Rpt~~~~~~~  261 (270)
T cd05056         242 TKCWAYDPSKRPRFTELKAQ  261 (270)
T ss_pred             HHHcCCChhhCcCHHHHHHH
Confidence            99999999999999998763


No 337
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00  E-value=1.4e-39  Score=323.29  Aligned_cols=242  Identities=26%  Similarity=0.425  Sum_probs=202.3

Q ss_pred             eeecccCCeEEEEEEEcCCCc--EEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          14 RTVGSGGFAKVKLATHVLTGE--KVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~--~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      +.||+|+||.||+|.+..++.  .+|+|.++..........+..|+.+++++ +||||+++++++...+..|+||||+++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~   80 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH   80 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence            468999999999999988776  46888876433233445788899999999 799999999999999999999999999


Q ss_pred             CChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCcc
Q psy6203          91 GELLDHIVERQ----------------RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCA  154 (568)
Q Consensus        91 g~L~~~i~~~~----------------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  154 (568)
                      |+|.+++....                .+++..+..++.|++.||+|||+.|++||||||+||+++.++.+||+|||++.
T Consensus        81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~  160 (270)
T cd05047          81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR  160 (270)
T ss_pred             CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCcc
Confidence            99999997543                47889999999999999999999999999999999999999999999999975


Q ss_pred             CCCCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCC
Q psy6203         155 KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPWMS  232 (568)
Q Consensus       155 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~  232 (568)
                      .....  ........+..|+|||++.+.. ++.++|||||||++|+|++ |..||.+.+.......+..+. ...+...+
T Consensus       161 ~~~~~--~~~~~~~~~~~y~apE~~~~~~-~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  237 (270)
T cd05047         161 GQEVY--VKKTMGRLPVRWMAIESLNYSV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLNCD  237 (270)
T ss_pred             ccchh--hhccCCCCccccCChHHHccCC-CCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCCCcCC
Confidence            32211  1111223456799999987665 5889999999999999997 999998888777777776543 23445578


Q ss_pred             hHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         233 PNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       233 ~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      .++.+++.+||+.||.+|||+.+++.
T Consensus       238 ~~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         238 DEVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHHH
Confidence            89999999999999999999999975


No 338
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00  E-value=9.1e-40  Score=336.08  Aligned_cols=255  Identities=25%  Similarity=0.440  Sum_probs=205.8

Q ss_pred             cccccCeEEEeeecccCCeEEEEEEE-----cCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEe
Q psy6203           4 IDLRNQYILERTVGSGGFAKVKLATH-----VLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIET   77 (568)
Q Consensus         4 ~~~~~~Y~i~~~lG~G~~g~V~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~   77 (568)
                      .--.++|++.+.||+|+||.||+|.+     ..+++.||||+++..........+.+|+.++.++ +||||+++++++..
T Consensus         3 ~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~   82 (343)
T cd05103           3 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK   82 (343)
T ss_pred             ccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeec
Confidence            33457899999999999999999984     3567899999997654333455678899999999 68999999998754


Q ss_pred             -CCEEEEEEeccCCCChHHHHHhc--------------------------------------------------------
Q psy6203          78 -SSHIFMVIEYCPGGELLDHIVER--------------------------------------------------------  100 (568)
Q Consensus        78 -~~~~~lV~E~~~~g~L~~~i~~~--------------------------------------------------------  100 (568)
                       ...+++|||||++|+|.+++...                                                        
T Consensus        83 ~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (343)
T cd05103          83 PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVE  162 (343)
T ss_pred             CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccch
Confidence             45689999999999999998642                                                        


Q ss_pred             -----------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc-ccccccc
Q psy6203         101 -----------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE-SQLQTSC  168 (568)
Q Consensus       101 -----------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~~~~  168 (568)
                                 ..++...+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++........ .......
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  242 (343)
T cd05103         163 EEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR  242 (343)
T ss_pred             hhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence                       1356778889999999999999999999999999999999999999999999876432211 1112234


Q ss_pred             CCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHH-HHHHHHHcCC-CCCCCCCChHHHHHHHHcccc
Q psy6203         169 GSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSID-QLYDKILNGK-YTEPPWMSPNSRQIVRSMLQV  245 (568)
Q Consensus       169 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~-~~~~~i~~~~-~~~~~~~~~~~~~li~~~L~~  245 (568)
                      ++..|+|||.+.+.. ++.++||||||+++|+|++ |..||...... .....+..+. ...+...++++.+++.+||+.
T Consensus       243 ~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~  321 (343)
T cd05103         243 LPLKWMAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHG  321 (343)
T ss_pred             CCcceECcHHhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccC
Confidence            567899999987765 5889999999999999997 99999765432 3334444443 344556788999999999999


Q ss_pred             CcCCCCCHHHHhcC
Q psy6203         246 EPGKRIKIQDLLGH  259 (568)
Q Consensus       246 dP~~Rps~~ell~h  259 (568)
                      ||++|||+.|+++|
T Consensus       322 ~p~~Rps~~eil~~  335 (343)
T cd05103         322 EPSQRPTFSELVEH  335 (343)
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999986


No 339
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00  E-value=1.1e-39  Score=321.91  Aligned_cols=251  Identities=28%  Similarity=0.515  Sum_probs=212.6

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC----CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG----EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      +|.+.+.||+|+||.||++.+..++..+++|+++.....    .....+.+|+.+++.++||||+++++++.+.+..++|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            699999999999999999999888877888877653321    1233566799999999999999999999989999999


Q ss_pred             EeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC
Q psy6203          85 IEYCPGGELLDHIVE----RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL  160 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  160 (568)
                      |||+++++|.+.+..    ...+++..+..++.|++.||.|||+.|++|+||+|+||+++. +.++|+|||++.......
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~  159 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC  159 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence            999999999988864    356899999999999999999999999999999999999975 679999999987653321


Q ss_pred             ccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-CCCCCChHHHHHH
Q psy6203         161 ESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNSRQIV  239 (568)
Q Consensus       161 ~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~li  239 (568)
                       .......|++.|+|||.+.+.. ++.++|+||+|+++|+|++|..||...+.......+..+..+ .+...+.++.++|
T Consensus       160 -~~~~~~~~~~~~~~pe~~~~~~-~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  237 (260)
T cd08222         160 -DLATTFTGTPYYMSPEALKHQG-YDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTPSLPETYSRQLNSIM  237 (260)
T ss_pred             -ccccCCCCCcCccCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCCcchhcHHHHHHH
Confidence             2223456889999999987655 578899999999999999999999887777766666655443 3445788999999


Q ss_pred             HHccccCcCCCCCHHHHhcCccc
Q psy6203         240 RSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       240 ~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                      .+||+.||++||++.|++.||||
T Consensus       238 ~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         238 QSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             HHHhcCChhhCcCHHHHhhCCCC
Confidence            99999999999999999999997


No 340
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00  E-value=2.9e-39  Score=322.53  Aligned_cols=250  Identities=24%  Similarity=0.403  Sum_probs=212.1

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCc----EEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGE----KVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIF   82 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   82 (568)
                      .++|++.+.||+|+||.||+|.++.+|.    .+|+|.+...........+.+|+.++++++||||+++++++.. ...+
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~   84 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQ   84 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceE
Confidence            4689999999999999999999877765    5899988765433344678889999999999999999999987 7889


Q ss_pred             EEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          83 MVIEYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      +||||+++|+|.+++... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++........
T Consensus        85 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~  164 (279)
T cd05057          85 LITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK  164 (279)
T ss_pred             EEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCccc
Confidence            999999999999999764 5689999999999999999999999999999999999999999999999999876543221


Q ss_pred             cc-cccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCChHHHHH
Q psy6203         162 SQ-LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQI  238 (568)
Q Consensus       162 ~~-~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~l  238 (568)
                      .. .....++..|+|||.+.+.. ++.++|+|||||++|++++ |..||.+....++...+..+. .+.+...+..+.++
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (279)
T cd05057         165 EYHAEGGKVPIKWMALESILHRI-YTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPPICTIDVYMV  243 (279)
T ss_pred             ceecCCCcccccccCHHHhhcCC-cCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCCCCCHHHHHH
Confidence            11 11122356899999987655 5889999999999999998 999999988888877777654 34455678899999


Q ss_pred             HHHccccCcCCCCCHHHHhc
Q psy6203         239 VRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       239 i~~~L~~dP~~Rps~~ell~  258 (568)
                      +.+||..||++|||+.++++
T Consensus       244 ~~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         244 LVKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             HHHHcCCChhhCCCHHHHHH
Confidence            99999999999999999864


No 341
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00  E-value=2.9e-39  Score=323.45  Aligned_cols=249  Identities=27%  Similarity=0.398  Sum_probs=205.6

Q ss_pred             eEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCc-hHHHHHHHHHHHhC---CCCCcceeeEEEEeCCE-----
Q psy6203          10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHI---SHQHICKLFQVIETSSH-----   80 (568)
Q Consensus        10 Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~Ei~~l~~l---~hpnIv~l~~~~~~~~~-----   80 (568)
                      |++.+.||+|+||.||+|.++.+++.||+|++......+. ...+.+|+.+++++   +||||+++++++...+.     
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~   80 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK   80 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence            7899999999999999999988899999999975433221 23455687777665   59999999999988776     


Q ss_pred             EEEEEeccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCC
Q psy6203          81 IFMVIEYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEG  158 (568)
Q Consensus        81 ~~lV~E~~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~  158 (568)
                      .+++|||+. ++|.+++....  .+++..+..++.|++.||.|||+.|++|+||+|+||+++.++.+||+|||++.....
T Consensus        81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~  159 (287)
T cd07838          81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSF  159 (287)
T ss_pred             eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccC
Confidence            999999996 58988887643  589999999999999999999999999999999999999999999999999876543


Q ss_pred             CCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCC-------C-----
Q psy6203         159 GLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY-------T-----  226 (568)
Q Consensus       159 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~-------~-----  226 (568)
                      .  .......++..|+|||++.+.. ++.++|+||+||++|+|++|.+||...+..+...++.....       .     
T Consensus       160 ~--~~~~~~~~~~~~~~PE~~~~~~-~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (287)
T cd07838         160 E--MALTSVVVTLWYRAPEVLLQSS-YATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSL  236 (287)
T ss_pred             C--cccccccccccccChHHhccCC-CCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCccc
Confidence            2  1223345788999999998766 58899999999999999999999988876665555432100       0     


Q ss_pred             ---------------CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         227 ---------------EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       227 ---------------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                                     ..+.+++.+.++|.+||+.||.+||+++|++.||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         237 PRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             chhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence                           001245778999999999999999999999999997


No 342
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00  E-value=1e-39  Score=340.69  Aligned_cols=252  Identities=26%  Similarity=0.441  Sum_probs=206.9

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEc-----CCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCC-CCCcceeeEEEEeCCE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHV-----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS-HQHICKLFQVIETSSH   80 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~   80 (568)
                      .++|.+.++||+|+||.||+|++.     .++..||+|+++..........+..|+.+|.++. ||||+++++++...+.
T Consensus        36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~  115 (401)
T cd05107          36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGP  115 (401)
T ss_pred             HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCC
Confidence            356888999999999999999864     3456899999976543333456888999999997 9999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcC-----------------------------------------------------------
Q psy6203          81 IFMVIEYCPGGELLDHIVERQ-----------------------------------------------------------  101 (568)
Q Consensus        81 ~~lV~E~~~~g~L~~~i~~~~-----------------------------------------------------------  101 (568)
                      .++|||||++|+|.+++...+                                                           
T Consensus       116 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  195 (401)
T cd05107         116 IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDM  195 (401)
T ss_pred             cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcc
Confidence            999999999999999986431                                                           


Q ss_pred             ---------------------------------------CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCC
Q psy6203         102 ---------------------------------------RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRN  142 (568)
Q Consensus       102 ---------------------------------------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~  142 (568)
                                                             .+++..+..++.||+.||.|||+.+|+||||||+|||++.+
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~  275 (401)
T cd05107         196 KGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEG  275 (401)
T ss_pred             hhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCC
Confidence                                                   25667788899999999999999999999999999999999


Q ss_pred             CCeEEEeecCccCCCCCCc-cccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHH-HHH
Q psy6203         143 QNLKLIDFGLCAKPEGGLE-SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQL-YDK  219 (568)
Q Consensus       143 ~~~kl~DFG~a~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~-~~~  219 (568)
                      +.+||+|||++........ .......+++.|+|||.+.+.. ++.++|||||||++|+|++ |..||......+. ...
T Consensus       276 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~  354 (401)
T cd05107         276 KLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNL-YTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNA  354 (401)
T ss_pred             CEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCC-CCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHH
Confidence            9999999999875432211 1112335678899999998765 5889999999999999998 8999977554443 344


Q ss_pred             HHcCC-CCCCCCCChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         220 ILNGK-YTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       220 i~~~~-~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      +..+. ...+..++.++.+|+.+||..+|.+||++.||+..
T Consensus       355 ~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         355 IKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             HHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            44442 34456688999999999999999999999999864


No 343
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00  E-value=5.1e-39  Score=317.34  Aligned_cols=249  Identities=25%  Similarity=0.403  Sum_probs=209.0

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      -..++|++.+.||+|+||.||+|.+. .+..+|+|.+....  .....+.+|+.+++.++|+||+++++++.. ...+++
T Consensus         3 ~~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v   78 (260)
T cd05073           3 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYII   78 (260)
T ss_pred             ccccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh--hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEE
Confidence            45789999999999999999999864 55679999886532  234568889999999999999999999887 778999


Q ss_pred             EeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc
Q psy6203          85 IEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES  162 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  162 (568)
                      |||+++++|.+++...  ..+++..+..++.|++.||.|||+.|++|+||||+||+++.++.+||+|||.+.........
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  158 (260)
T cd05073          79 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT  158 (260)
T ss_pred             EEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcc
Confidence            9999999999999763  45788899999999999999999999999999999999999999999999998754432211


Q ss_pred             ccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCChHHHHHHH
Q psy6203         163 QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-TEPPWMSPNSRQIVR  240 (568)
Q Consensus       163 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~  240 (568)
                      ......++..|+|||++.+.. ++.++|+|||||++|++++ |..||.+.+...+...+..+.. +.+...+.++.+++.
T Consensus       159 ~~~~~~~~~~y~~PE~~~~~~-~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  237 (260)
T cd05073         159 AREGAKFPIKWTAPEAINFGS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMM  237 (260)
T ss_pred             cccCCcccccccCHhHhccCC-cCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCcccCCHHHHHHHH
Confidence            222234567799999997765 5889999999999999998 9999998887777776665532 334567889999999


Q ss_pred             HccccCcCCCCCHHHHhc
Q psy6203         241 SMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       241 ~~L~~dP~~Rps~~ell~  258 (568)
                      +||+.+|++||++.+++.
T Consensus       238 ~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         238 RCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             HHcccCcccCcCHHHHHH
Confidence            999999999999998864


No 344
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00  E-value=1.1e-39  Score=331.28  Aligned_cols=245  Identities=24%  Similarity=0.344  Sum_probs=197.0

Q ss_pred             CCeEEEEEEEcCCCcEEEEEEeecCC-cCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCCChHHHHH
Q psy6203          20 GFAKVKLATHVLTGEKVAIKIMKKAT-LGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIV   98 (568)
Q Consensus        20 ~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g~L~~~i~   98 (568)
                      ++|.||++++..+++.||+|++.... ..+....+..|+.+++.++||||+++++++...+..+++|||+++++|.+++.
T Consensus        12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l~   91 (314)
T cd08216          12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLLK   91 (314)
T ss_pred             CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHHH
Confidence            45666777777799999999997653 23455688999999999999999999999999999999999999999999997


Q ss_pred             hc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc------cccccccCC
Q psy6203          99 ER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE------SQLQTSCGS  170 (568)
Q Consensus        99 ~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~------~~~~~~~gt  170 (568)
                      ..  ..+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||.+........      .......++
T Consensus        92 ~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (314)
T cd08216          92 THFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKN  171 (314)
T ss_pred             HhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccccccccccccccc
Confidence            63  4689999999999999999999999999999999999999999999999998764322111      112334577


Q ss_pred             ccccccccccCc-ccCCcccceechhhHHHHHHhCCCCCCCCCHHHHH-HHHHcCCC-----------------------
Q psy6203         171 PNYAAPEVIKGK-QYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLY-DKILNGKY-----------------------  225 (568)
Q Consensus       171 ~~y~aPE~l~~~-~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~-~~i~~~~~-----------------------  225 (568)
                      ..|+|||++.+. ..++.++||||+||++|+|++|..||......... +.+.....                       
T Consensus       172 ~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (314)
T cd08216         172 LPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNE  251 (314)
T ss_pred             ccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCccccccc
Confidence            889999998753 33688999999999999999999999765533322 22211100                       


Q ss_pred             ----------CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         226 ----------TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       226 ----------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                                .....+++++.+|+.+||+.||++|||++++|+||||+.
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~  300 (314)
T cd08216         252 HPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQ  300 (314)
T ss_pred             ccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhh
Confidence                      000113467889999999999999999999999999984


No 345
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It 
Probab=100.00  E-value=2.9e-39  Score=322.70  Aligned_cols=251  Identities=22%  Similarity=0.299  Sum_probs=210.1

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcC----CCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEe-CCEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVL----TGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIET-SSHI   81 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~-~~~~   81 (568)
                      +++|++.+.||+|+||.||+|.+..    ++..||+|.+...........+.+|+.++++++||||+++++++.. ....
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   84 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP   84 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence            5789999999999999999999876    3578999988754333345667889999999999999999998765 5678


Q ss_pred             EEEEeccCCCChHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCc
Q psy6203          82 FMVIEYCPGGELLDHIVER--------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC  153 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a  153 (568)
                      ++++||+++++|.+++...        ..+++..+..++.|++.||.|||+++++||||||+||+++.++.+||+|||++
T Consensus        85 ~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~  164 (280)
T cd05043          85 FVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALS  164 (280)
T ss_pred             EEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCc
Confidence            9999999999999998653        45889999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCCcc-ccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCCC
Q psy6203         154 AKPEGGLES-QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-TEPPW  230 (568)
Q Consensus       154 ~~~~~~~~~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~~~~~  230 (568)
                      +........ ......++..|+|||++.+.. ++.++|||||||++|++++ |+.||...+..++...+..+.. ..+..
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  243 (280)
T cd05043         165 RDLFPMDYHCLGDNENRPVKWMALESLVNKE-YSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLAQPIN  243 (280)
T ss_pred             ccccCCceEEeCCCCCcchhccCHHHHhcCC-CCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCCCCCc
Confidence            754332111 112234567899999997765 5899999999999999999 9999988877777766665532 34455


Q ss_pred             CChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         231 MSPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       231 ~~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      .++++.+++.+||..||++|||+.+++.
T Consensus       244 ~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         244 CPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            7889999999999999999999999975


No 346
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00  E-value=3.2e-39  Score=316.88  Aligned_cols=243  Identities=26%  Similarity=0.432  Sum_probs=206.2

Q ss_pred             eeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCCCh
Q psy6203          14 RTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGEL   93 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g~L   93 (568)
                      ++||+|+||.||+|.+.. ++.||+|++...........+..|++++++++||||+++++++.+.+..++||||+++++|
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l   79 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSL   79 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcH
Confidence            479999999999999877 9999999987654433455788899999999999999999999999999999999999999


Q ss_pred             HHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc-ccccCCc
Q psy6203          94 LDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL-QTSCGSP  171 (568)
Q Consensus        94 ~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~-~~~~gt~  171 (568)
                      .+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++........... ....++.
T Consensus        80 ~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~  159 (251)
T cd05041          80 LTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIPI  159 (251)
T ss_pred             HHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCccee
Confidence            9998663 5689999999999999999999999999999999999999999999999999875442211111 1223456


Q ss_pred             cccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCChHHHHHHHHccccCcCC
Q psy6203         172 NYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMSPNSRQIVRSMLQVEPGK  249 (568)
Q Consensus       172 ~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~li~~~L~~dP~~  249 (568)
                      .|+|||.+.+.. ++.++|||||||++|+|++ |..||...........+..+ ....+...+..+.+++.+||+.+|.+
T Consensus       160 ~y~~PE~~~~~~-~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~  238 (251)
T cd05041         160 KWTAPEALNYGR-YTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYRLMLQCWAYDPEN  238 (251)
T ss_pred             ccCChHhhccCC-CCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHhccChhh
Confidence            799999987765 5899999999999999999 89999887776666666554 23445567899999999999999999


Q ss_pred             CCCHHHHhc
Q psy6203         250 RIKIQDLLG  258 (568)
Q Consensus       250 Rps~~ell~  258 (568)
                      |||++|+++
T Consensus       239 Rp~~~ell~  247 (251)
T cd05041         239 RPSFSEIYN  247 (251)
T ss_pred             CcCHHHHHH
Confidence            999999986


No 347
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00  E-value=2e-39  Score=328.55  Aligned_cols=254  Identities=29%  Similarity=0.362  Sum_probs=212.2

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIF   82 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   82 (568)
                      +..+.|...+.||+|+||.||+|++..++..+|+|.+......  .....+..|+.+++.++|+|++++++++...+..+
T Consensus        12 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   91 (308)
T cd06634          12 DPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAW   91 (308)
T ss_pred             CcHHHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeE
Confidence            3456788899999999999999999999999999998753222  22346778999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          83 MVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      +||||+. |+|.+.+.. ...+++..+..++.|++.||.|||+.+++||||+|+||+++.++.++|+|||++.....   
T Consensus        92 lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~---  167 (308)
T cd06634          92 LVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP---  167 (308)
T ss_pred             EEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecC---
Confidence            9999996 578777654 45689999999999999999999999999999999999999999999999999765432   


Q ss_pred             cccccccCCccccccccccC--cccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC--CCCCCChHHHH
Q psy6203         162 SQLQTSCGSPNYAAPEVIKG--KQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT--EPPWMSPNSRQ  237 (568)
Q Consensus       162 ~~~~~~~gt~~y~aPE~l~~--~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~  237 (568)
                        .....|++.|+|||.+.+  ...++.++|||||||++|+|++|..||...+.......+..+..+  .....+..+.+
T Consensus       168 --~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (308)
T cd06634         168 --ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRN  245 (308)
T ss_pred             --cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHH
Confidence              123468899999999853  223578999999999999999999999776554444444443332  23357888999


Q ss_pred             HHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         238 IVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       238 li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      +|++||+.+|++||++++++.|||+..
T Consensus       246 li~~cl~~~P~~Rp~~~~ll~~~~~~~  272 (308)
T cd06634         246 FVDSCLQKIPQDRPTSEVLLKHRFVLR  272 (308)
T ss_pred             HHHHHhhCCcccCCCHHHHhhCccccc
Confidence            999999999999999999999999984


No 348
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity 
Probab=100.00  E-value=6.2e-40  Score=323.56  Aligned_cols=239  Identities=20%  Similarity=0.303  Sum_probs=197.5

Q ss_pred             eeecccCCeEEEEEEEcCCCc-------EEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203          14 RTVGSGGFAKVKLATHVLTGE-------KVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~~-------~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      +.||+|+||.||+|.+..++.       .+|+|.+.... ....+.+..|+.+++.++||||+++++++...+..++|||
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   79 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQE   79 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchh-HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEe
Confidence            469999999999999866544       38888876432 2234567789999999999999999999999899999999


Q ss_pred             ccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCC--------eEEEeecCccCCC
Q psy6203          87 YCPGGELLDHIVERQ-RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQN--------LKLIDFGLCAKPE  157 (568)
Q Consensus        87 ~~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~--------~kl~DFG~a~~~~  157 (568)
                      |+++|+|.+++..++ .+++..+..++.||+.||.|||++||+||||||+||+++.++.        ++++|||++....
T Consensus        80 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~  159 (258)
T cd05078          80 YVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVL  159 (258)
T ss_pred             cCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccC
Confidence            999999999997644 5899999999999999999999999999999999999987764        6999999876543


Q ss_pred             CCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhC-CCCCCCCCHHHHHHHHHcCCCCCCCCCChHHH
Q psy6203         158 GGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCG-FLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR  236 (568)
Q Consensus       158 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  236 (568)
                      .     .....+++.|+|||++.+...++.++|||||||++|+|++| .+||...+..... .+.......+...+.++.
T Consensus       160 ~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  233 (258)
T cd05078         160 P-----KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKL-QFYEDRHQLPAPKWTELA  233 (258)
T ss_pred             C-----chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHH-HHHHccccCCCCCcHHHH
Confidence            2     12346788999999998755568899999999999999998 5677665544432 233444555666778999


Q ss_pred             HHHHHccccCcCCCCCHHHHhcC
Q psy6203         237 QIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       237 ~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      +++.+||+.||++|||++++++.
T Consensus       234 ~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         234 NLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             HHHHHHhccChhhCCCHHHHHHh
Confidence            99999999999999999999863


No 349
>KOG0669|consensus
Probab=100.00  E-value=1.3e-41  Score=310.23  Aligned_cols=262  Identities=24%  Similarity=0.420  Sum_probs=214.0

Q ss_pred             ccccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCc-hHHHHHHHHHHHhCCCCCcceeeEEEEe----
Q psy6203           3 YIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLFQVIET----   77 (568)
Q Consensus         3 ~~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~Ei~~l~~l~hpnIv~l~~~~~~----   77 (568)
                      +.+..+.|+-..+||+|.||.||+|+++.+|+.||+|++-...-.+. -....+|+++|..|+|+|++.+++++..    
T Consensus        12 ~~~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp   91 (376)
T KOG0669|consen   12 FCDEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATP   91 (376)
T ss_pred             ceecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCC
Confidence            34566788889999999999999999999999999986543322222 2245679999999999999999888742    


Q ss_pred             ----CCEEEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecC
Q psy6203          78 ----SSHIFMVIEYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGL  152 (568)
Q Consensus        78 ----~~~~~lV~E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~  152 (568)
                          ...+|+||.+|+ .+|..++.+. .+++..++.+++.+++.||.|+|.+.|+|||+||.|+||+.+|.+||+|||+
T Consensus        92 ~~r~r~t~ylVf~~ce-hDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGl  170 (376)
T KOG0669|consen   92 TNRDRATFYLVFDFCE-HDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGL  170 (376)
T ss_pred             cccccceeeeeHHHhh-hhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeecccc
Confidence                235899999995 5888888765 6899999999999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCC---ccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc--CCC--
Q psy6203         153 CAKPEGGL---ESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN--GKY--  225 (568)
Q Consensus       153 a~~~~~~~---~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~--~~~--  225 (568)
                      ++......   .......+.|.+|.+||.+.|...|+++.|||..|||+.+|+||.+.+.+++..+....|..  |..  
T Consensus       171 ar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tk  250 (376)
T KOG0669|consen  171 ARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITK  250 (376)
T ss_pred             ccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCc
Confidence            96543321   12233456799999999999998899999999999999999999999998887665554421  111  


Q ss_pred             ---C---------------CC-------------CCCChHHHHHHHHccccCcCCCCCHHHHhcCcccccC
Q psy6203         226 ---T---------------EP-------------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       226 ---~---------------~~-------------~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                         +               .+             -.-++++.+|+.+||..||.+|++++++++|.||...
T Consensus       251 evWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kd  321 (376)
T KOG0669|consen  251 EVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKD  321 (376)
T ss_pred             ccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcC
Confidence               0               00             0124578899999999999999999999999999843


No 350
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00  E-value=3e-39  Score=323.33  Aligned_cols=251  Identities=29%  Similarity=0.449  Sum_probs=203.1

Q ss_pred             cCeEEEeeecccCCeEEEEEEE----cCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeC--CEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATH----VLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETS--SHI   81 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~----~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~--~~~   81 (568)
                      ..|++.+.||+|+||.||+|..    ..++..||+|.++..........+.+|+.+++.++||||+++++++...  ...
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (284)
T cd05079           4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI   83 (284)
T ss_pred             hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence            3578999999999999999974    4578899999987554334456788999999999999999999998765  578


Q ss_pred             EEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC
Q psy6203          82 FMVIEYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL  160 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  160 (568)
                      ++||||++|++|.+++... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++.......
T Consensus        84 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~  163 (284)
T cd05079          84 KLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK  163 (284)
T ss_pred             EEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCc
Confidence            9999999999999998764 458999999999999999999999999999999999999999999999999987654321


Q ss_pred             c--cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCC---------------CHHHHHHHHHcC
Q psy6203         161 E--SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSD---------------SIDQLYDKILNG  223 (568)
Q Consensus       161 ~--~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~---------------~~~~~~~~i~~~  223 (568)
                      .  .......++..|+|||++.+.. ++.++|||||||++|+|+++..|+...               ........+..+
T Consensus       164 ~~~~~~~~~~~~~~y~apE~~~~~~-~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (284)
T cd05079         164 EYYTVKDDLDSPVFWYAPECLIQSK-FYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEG  242 (284)
T ss_pred             cceeecCCCCCCccccCHHHhccCC-CCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcC
Confidence            1  1122345677899999987765 588999999999999999987664221               111122222232


Q ss_pred             C-CCCCCCCChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         224 K-YTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       224 ~-~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      . .+.+..+++.+.+|+.+||+.||++|||+++++.+
T Consensus       243 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~  279 (284)
T cd05079         243 KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEG  279 (284)
T ss_pred             ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            2 23455678999999999999999999999999864


No 351
>KOG0194|consensus
Probab=100.00  E-value=5.9e-40  Score=336.63  Aligned_cols=247  Identities=23%  Similarity=0.391  Sum_probs=210.6

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCc---E-EEEEEeecCC--cCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGE---K-VAIKIMKKAT--LGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIF   82 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~---~-vavK~~~~~~--~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   82 (568)
                      +-.+.++||+|+||.||+|..+..+.   . ||+|..+...  ..+....+.+|.++|++++|||||++||+......++
T Consensus       158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~  237 (474)
T KOG0194|consen  158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLM  237 (474)
T ss_pred             CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccE
Confidence            44566999999999999998776533   3 8999887522  2244667889999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          83 MVIEYCPGGELLDHIVERQ-RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      ||||+|.||+|.+++.+.+ .++..+...++.+.+.||+|||+++++||||-..|+|++.++.+||+|||+++....-  
T Consensus       238 ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~--  315 (474)
T KOG0194|consen  238 LVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQY--  315 (474)
T ss_pred             EEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcce--
Confidence            9999999999999999876 4999999999999999999999999999999999999999999999999998765311  


Q ss_pred             cccc-cccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHc-CCC-CCCCCCChHHHH
Q psy6203         162 SQLQ-TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILN-GKY-TEPPWMSPNSRQ  237 (568)
Q Consensus       162 ~~~~-~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~-~~~-~~~~~~~~~~~~  237 (568)
                      .... ...-...|+|||.+... .|++++||||+||++||+++ |..||.+....++...|.. +.. +.+...+..+..
T Consensus       316 ~~~~~~~klPirWLAPEtl~~~-~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~  394 (474)
T KOG0194|consen  316 VMKKFLKKLPIRWLAPETLNTG-IFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAK  394 (474)
T ss_pred             eeccccccCcceecChhhhccC-ccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHH
Confidence            1111 11245689999999877 47999999999999999999 8889999999999999944 433 345567788899


Q ss_pred             HHHHccccCcCCCCCHHHHhc
Q psy6203         238 IVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       238 li~~~L~~dP~~Rps~~ell~  258 (568)
                      ++.+|+..||++|||+.++.+
T Consensus       395 ~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  395 VMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             HHHHhccCChhhccCHHHHHH
Confidence            999999999999999999864


No 352
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00  E-value=4.9e-39  Score=316.69  Aligned_cols=243  Identities=24%  Similarity=0.397  Sum_probs=205.0

Q ss_pred             eeecccCCeEEEEEEEcC-CCc--EEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          14 RTVGSGGFAKVKLATHVL-TGE--KVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      +.||+|++|.||+|.+.. .++  .||+|.+...........+.+|+.++++++||||+++++++.. ...++||||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            468999999999999865 333  6999998876543445678899999999999999999999988 889999999999


Q ss_pred             CChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc--cccc
Q psy6203          91 GELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES--QLQT  166 (568)
Q Consensus        91 g~L~~~i~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~--~~~~  166 (568)
                      ++|.+.+....  .+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++.........  ....
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  159 (257)
T cd05040          80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEH  159 (257)
T ss_pred             CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecccC
Confidence            99999998754  6899999999999999999999999999999999999999999999999998765432111  1122


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcC--CCCCCCCCChHHHHHHHHcc
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG--KYTEPPWMSPNSRQIVRSML  243 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~L  243 (568)
                      ..++..|+|||.+.+.. ++.++|||||||++|+|++ |..||...+..+....+...  ....+...+..+.+++.+||
T Consensus       160 ~~~~~~y~~pE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  238 (257)
T cd05040         160 LKVPFAWCAPESLRTRT-FSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCW  238 (257)
T ss_pred             CCCCceecCHHHhcccC-cCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHC
Confidence            45678899999987766 5889999999999999998 99999887777776666532  22334457889999999999


Q ss_pred             ccCcCCCCCHHHHhc
Q psy6203         244 QVEPGKRIKIQDLLG  258 (568)
Q Consensus       244 ~~dP~~Rps~~ell~  258 (568)
                      +.+|.+|||+.++++
T Consensus       239 ~~~p~~Rps~~~~~~  253 (257)
T cd05040         239 AHNPADRPTFAALRE  253 (257)
T ss_pred             CCCcccCCCHHHHHH
Confidence            999999999999975


No 353
>KOG1035|consensus
Probab=100.00  E-value=1.5e-40  Score=359.73  Aligned_cols=254  Identities=28%  Similarity=0.528  Sum_probs=208.7

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEe---------
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIET---------   77 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~---------   77 (568)
                      .++|+.++.||+||||.||+|+++.+|+.||||.+...........+.+|+..|.+|+|||||++|..|.+         
T Consensus       478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e  557 (1351)
T KOG1035|consen  478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE  557 (1351)
T ss_pred             hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence            45778899999999999999999999999999999876533445678899999999999999998754200         


Q ss_pred             ----------------------------------------------C---------------------------------
Q psy6203          78 ----------------------------------------------S---------------------------------   78 (568)
Q Consensus        78 ----------------------------------------------~---------------------------------   78 (568)
                                                                    .                                 
T Consensus       558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e  637 (1351)
T KOG1035|consen  558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE  637 (1351)
T ss_pred             ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence                                                          0                                 


Q ss_pred             -------------------------------CEEEEEEeccCCCChHHHHHhcCCC-CHHHHHHHHHHHHHHHHHHHHcC
Q psy6203          79 -------------------------------SHIFMVIEYCPGGELLDHIVERQRL-GEKESRAFFRQILSAVAYLHHLG  126 (568)
Q Consensus        79 -------------------------------~~~~lV~E~~~~g~L~~~i~~~~~l-~~~~~~~i~~qi~~aL~~LH~~~  126 (568)
                                                     ..+||-||||+...|.+++..+... ....++++++||++||.|+|++|
T Consensus       638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~g  717 (1351)
T KOG1035|consen  638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQG  717 (1351)
T ss_pred             CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhCc
Confidence                                           1268999999988777777665544 47789999999999999999999


Q ss_pred             ceecCCCCCceEEcCCCCeEEEeecCccCCC-----------------CCCccccccccCCccccccccccCcc--cCCc
Q psy6203         127 YAHRDLKPENVLLDRNQNLKLIDFGLCAKPE-----------------GGLESQLQTSCGSPNYAAPEVIKGKQ--YYGS  187 (568)
Q Consensus       127 ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~-----------------~~~~~~~~~~~gt~~y~aPE~l~~~~--~~~~  187 (568)
                      ||||||||.||++++++.|||+|||+|+...                 +......+..+||.-|+|||++.+..  .|+.
T Consensus       718 iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~  797 (1351)
T KOG1035|consen  718 IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNS  797 (1351)
T ss_pred             eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccc
Confidence            9999999999999999999999999987611                 11112345568999999999998766  5899


Q ss_pred             ccceechhhHHHHHHhCCCCCCCC-CHHHHHHHHHcCCCCCCCC----CChHHHHHHHHccccCcCCCCCHHHHhcCccc
Q psy6203         188 ETDVWSMGVMLYALLCGFLPFDSD-SIDQLYDKILNGKYTEPPW----MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  262 (568)
Q Consensus       188 ~~DiwSlG~il~~lltG~~pf~~~-~~~~~~~~i~~~~~~~~~~----~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~  262 (568)
                      |+||||||+|++||+   .||... ....+...+..+..+.+..    --+.-..+|++||+.||.+||||.|+|++.||
T Consensus       798 KiDmYSLGIVlFEM~---yPF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~ll  874 (1351)
T KOG1035|consen  798 KIDMYSLGIVLFEML---YPFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELL  874 (1351)
T ss_pred             hhhhHHHHHHHHHHh---ccCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCC
Confidence            999999999999998   467543 3445666777777776632    33566899999999999999999999999999


Q ss_pred             c
Q psy6203         263 K  263 (568)
Q Consensus       263 ~  263 (568)
                      .
T Consensus       875 p  875 (1351)
T KOG1035|consen  875 P  875 (1351)
T ss_pred             C
Confidence            6


No 354
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00  E-value=4.3e-39  Score=318.41  Aligned_cols=239  Identities=19%  Similarity=0.280  Sum_probs=195.2

Q ss_pred             eeecccCCeEEEEEEEcCC------------CcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEE
Q psy6203          14 RTVGSGGFAKVKLATHVLT------------GEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHI   81 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~------------~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~   81 (568)
                      +.||+|+||.||+|.....            ...+|+|.+.... ......+..|+.+++.++||||+++++++......
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~   79 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH-RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVEN   79 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence            4689999999999985322            2358888876543 22344677889999999999999999999998899


Q ss_pred             EEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCC-------eEEEeecCc
Q psy6203          82 FMVIEYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQN-------LKLIDFGLC  153 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~-------~kl~DFG~a  153 (568)
                      ++||||+++++|..++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.       ++++|||++
T Consensus        80 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~  159 (262)
T cd05077          80 IMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIP  159 (262)
T ss_pred             EEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCC
Confidence            9999999999998888653 56899999999999999999999999999999999999987664       899999987


Q ss_pred             cCCCCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHH-hCCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Q psy6203         154 AKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALL-CGFLPFDSDSIDQLYDKILNGKYTEPPWMS  232 (568)
Q Consensus       154 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~ll-tG~~pf~~~~~~~~~~~i~~~~~~~~~~~~  232 (568)
                      .....     .....++..|+|||.+.+...++.++|||||||++|+|+ +|..||......+.. ....+........+
T Consensus       160 ~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~~  233 (262)
T cd05077         160 ITVLS-----RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYEGQCMLVTPSC  233 (262)
T ss_pred             ccccC-----cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHhcCccCCCCCh
Confidence            65432     123457889999999875555788999999999999998 589998876654443 23334444444456


Q ss_pred             hHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         233 PNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       233 ~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      +++.+||.+||+.||.+||++.+|+.+
T Consensus       234 ~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         234 KELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence            889999999999999999999999875


No 355
>KOG0608|consensus
Probab=100.00  E-value=3.5e-40  Score=333.86  Aligned_cols=255  Identities=28%  Similarity=0.553  Sum_probs=216.2

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      .-|..++.||-|+||+|.+++...|...||+|.+.+...-  .....++.|-+||..-+.+-||+||-.|++++.+|+||
T Consensus       629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM  708 (1034)
T KOG0608|consen  629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM  708 (1034)
T ss_pred             cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence            4578899999999999999999999999999999876542  34557788999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCC--------
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPE--------  157 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~--------  157 (568)
                      +|++||++-.++...+-|.|+.++.++..+..|+++.|..|+|||||||+|||||.+|+|||+|||+|+-+.        
T Consensus       709 dYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYY  788 (1034)
T KOG0608|consen  709 DYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYY  788 (1034)
T ss_pred             eccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccc
Confidence            999999999999999999999999999999999999999999999999999999999999999999985221        


Q ss_pred             -CCC----cc----------------------------ccccccCCccccccccccCcccCCcccceechhhHHHHHHhC
Q psy6203         158 -GGL----ES----------------------------QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCG  204 (568)
Q Consensus       158 -~~~----~~----------------------------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG  204 (568)
                       .+.    ++                            .....+||+.|+|||++.... |+..+|.||.|||||||+.|
T Consensus       789 q~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g-~~q~cdwws~gvil~em~~g  867 (1034)
T KOG0608|consen  789 QEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTG-YTQLCDWWSVGVILYEMLVG  867 (1034)
T ss_pred             cCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccC-ccccchhhHhhHHHHHHhhC
Confidence             000    00                            001236999999999998776 58899999999999999999


Q ss_pred             CCCCCCCCHHHHHHHHHcC----CCCCCCCCChHHHHHHHHccccCcCCCCC---HHHHhcCccccc
Q psy6203         205 FLPFDSDSIDQLYDKILNG----KYTEPPWMSPNSRQIVRSMLQVEPGKRIK---IQDLLGHNWVKM  264 (568)
Q Consensus       205 ~~pf~~~~~~~~~~~i~~~----~~~~~~~~~~~~~~li~~~L~~dP~~Rps---~~ell~hp~~~~  264 (568)
                      .+||-.++.-+...++.+.    .++....+++++.++|.+++. +++.|..   ++|+..||||+.
T Consensus       868 ~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpfFkg  933 (1034)
T KOG0608|consen  868 QPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPFFKG  933 (1034)
T ss_pred             CCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCccccc
Confidence            9999877655544444433    223345689999999998775 7888874   788999999984


No 356
>KOG1026|consensus
Probab=100.00  E-value=3.9e-40  Score=348.16  Aligned_cols=249  Identities=24%  Similarity=0.393  Sum_probs=217.4

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcC-----CCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVL-----TGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIF   82 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   82 (568)
                      .+-...+.||+|+||+||+|+...     ....||||.++..........|++|++++..|+|||||++++++..++.+|
T Consensus       486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~  565 (774)
T KOG1026|consen  486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC  565 (774)
T ss_pred             hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence            345677899999999999998543     235799999987665445678999999999999999999999999999999


Q ss_pred             EEEeccCCCChHHHHHhcC--------------CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEE
Q psy6203          83 MVIEYCPGGELLDHIVERQ--------------RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLI  148 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~~--------------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~  148 (568)
                      +|+|||..|||.+++....              +++..+...|+.||+.|+.||-++.+|||||-..|+|+.++-.|||+
T Consensus       566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIs  645 (774)
T KOG1026|consen  566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKIS  645 (774)
T ss_pred             EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEec
Confidence            9999999999999997531              27888999999999999999999999999999999999999999999


Q ss_pred             eecCccCCCCCCccccc-cccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-
Q psy6203         149 DFGLCAKPEGGLESQLQ-TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-  225 (568)
Q Consensus       149 DFG~a~~~~~~~~~~~~-~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-  225 (568)
                      |||+++..-........ ...-..+|||||.+.-++ ++.+|||||+||+|||+++ |+.||.+.+.+++.+.|..|.. 
T Consensus       646 DfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~k-FTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~lL  724 (774)
T KOG1026|consen  646 DFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGK-FTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQLL  724 (774)
T ss_pred             ccccchhhhhhhhhcccCCceeeeecCCHHHhhcCc-ccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCcc
Confidence            99999875433222222 223456899999998877 6999999999999999998 9999999999999999999876 


Q ss_pred             CCCCCCChHHHHHHHHccccCcCCCCCHHHHh
Q psy6203         226 TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLL  257 (568)
Q Consensus       226 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell  257 (568)
                      +.|...+.++.+|+..||+.+|.+||++.||-
T Consensus       725 ~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~  756 (774)
T KOG1026|consen  725 SCPENCPTEVYSLMLECWNENPKRRPSFKEIH  756 (774)
T ss_pred             cCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence            45677999999999999999999999999984


No 357
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00  E-value=2.1e-39  Score=315.72  Aligned_cols=229  Identities=24%  Similarity=0.399  Sum_probs=193.9

Q ss_pred             cCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCCChHHHHH
Q psy6203          19 GGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIV   98 (568)
Q Consensus        19 G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g~L~~~i~   98 (568)
                      |.+|.||+|+++.+++.||+|.+....      ...+|...+....||||+++++++.+.+..++||||++||+|.+++.
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   77 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHIS   77 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHH
Confidence            899999999999999999999987643      22345555556679999999999999999999999999999999998


Q ss_pred             hcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCCcccccccc
Q psy6203          99 ERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEV  178 (568)
Q Consensus        99 ~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~  178 (568)
                      ....+++..+..++.|++.||.|||++||+||||||+||+++.++.++++|||.+......    .....++..|+|||.
T Consensus        78 ~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----~~~~~~~~~y~aPE~  153 (237)
T cd05576          78 KFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----CDGEAVENMYCAPEV  153 (237)
T ss_pred             HhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc----cccCCcCccccCCcc
Confidence            8888999999999999999999999999999999999999999999999999987654332    223456778999999


Q ss_pred             ccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCCCCH-----
Q psy6203         179 IKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKI-----  253 (568)
Q Consensus       179 l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~-----  253 (568)
                      +.+.. ++.++|+||+|+++|+|++|..||........    .......+..+++.+.++|.+||+.||++||++     
T Consensus       154 ~~~~~-~~~~~DvwslG~il~el~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~  228 (237)
T cd05576         154 GGISE-ETEACDWWSLGAILFELLTGKTLVECHPSGIN----THTTLNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGV  228 (237)
T ss_pred             cCCCC-CCchhhHHHHHHHHHHHHHCcchhhcCchhcc----cccccCCcccCCHHHHHHHHHHccCCHHHhcCCCccch
Confidence            87665 58899999999999999999988764332110    012234567789999999999999999999986     


Q ss_pred             HHHhcCccc
Q psy6203         254 QDLLGHNWV  262 (568)
Q Consensus       254 ~ell~hp~~  262 (568)
                      +++++||||
T Consensus       229 ~~~~~h~~~  237 (237)
T cd05576         229 EDIKSHPFF  237 (237)
T ss_pred             HHHHcCCCC
Confidence            999999997


No 358
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00  E-value=4.1e-39  Score=320.66  Aligned_cols=238  Identities=20%  Similarity=0.259  Sum_probs=193.7

Q ss_pred             eecccCCeEEEEEEEcCC------------------------CcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcce
Q psy6203          15 TVGSGGFAKVKLATHVLT------------------------GEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICK   70 (568)
Q Consensus        15 ~lG~G~~g~V~~~~~~~~------------------------~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~   70 (568)
                      .||+|+||.||+|....+                        ...||+|++..... .....+..|+.+++.++||||++
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv~   80 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR-DIALAFFETASLMSQVSHIHLAF   80 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH-HHHHHHHHHHHHHhcCCCCCeee
Confidence            699999999999975322                        13588888864321 22345777899999999999999


Q ss_pred             eeEEEEeCCEEEEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCC------
Q psy6203          71 LFQVIETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQ------  143 (568)
Q Consensus        71 l~~~~~~~~~~~lV~E~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~------  143 (568)
                      +++++...+..++||||+++|+|..++.. .+.+++..+..++.||+.||+|||++||+||||||+||+++..+      
T Consensus        81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~  160 (274)
T cd05076          81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTS  160 (274)
T ss_pred             EEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCcc
Confidence            99999999999999999999999998865 46789999999999999999999999999999999999997654      


Q ss_pred             -CeEEEeecCccCCCCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHH-hCCCCCCCCCHHHHHHHHH
Q psy6203         144 -NLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALL-CGFLPFDSDSIDQLYDKIL  221 (568)
Q Consensus       144 -~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~ll-tG~~pf~~~~~~~~~~~i~  221 (568)
                       .+|++|||++......     ....++..|+|||.+.+...++.++|||||||++|+|+ +|..||...+..+.... .
T Consensus       161 ~~~kl~d~g~~~~~~~~-----~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-~  234 (274)
T cd05076         161 PFIKLSDPGVSFTALSR-----EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF-Y  234 (274)
T ss_pred             ceeeecCCccccccccc-----cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH-H
Confidence             3899999987543221     22357788999999876555689999999999999985 69999987665544332 2


Q ss_pred             cCCCCCCCCCChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         222 NGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       222 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      ......+...++.+.++|.+||+.+|++|||+.+++++
T Consensus       235 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         235 EKKHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             HhccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            33334445567889999999999999999999999875


No 359
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00  E-value=8.2e-39  Score=317.46  Aligned_cols=244  Identities=18%  Similarity=0.308  Sum_probs=192.6

Q ss_pred             eeecccCCeEEEEEEEcC--CCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCC
Q psy6203          14 RTVGSGGFAKVKLATHVL--TGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGG   91 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g   91 (568)
                      +.||+|+||.||+|....  ....+|+|.+...........+.+|+.+++.++||||+++++.+......|+||||+++|
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLG   80 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCC
Confidence            469999999999996533  345788887764433333456778999999999999999999999999999999999999


Q ss_pred             ChHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc-cccc
Q psy6203          92 ELLDHIVERQ-----RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE-SQLQ  165 (568)
Q Consensus        92 ~L~~~i~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~  165 (568)
                      +|.+++....     ..++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ ....
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~  160 (269)
T cd05042          81 DLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYITKD  160 (269)
T ss_pred             cHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheeccC
Confidence            9999997643     246778899999999999999999999999999999999999999999999865332211 1112


Q ss_pred             cccCCccccccccccC------cccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHc-CCCC-----CCCCCC
Q psy6203         166 TSCGSPNYAAPEVIKG------KQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILN-GKYT-----EPPWMS  232 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~------~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~-~~~~-----~~~~~~  232 (568)
                      ...+++.|+|||++..      ...++.++|||||||++|+|++ |..||......+....+.. +...     .+...+
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (269)
T cd05042         161 CHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYS  240 (269)
T ss_pred             CCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCC
Confidence            2345678999999753      2235789999999999999999 8899987766555444433 3222     223467


Q ss_pred             hHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         233 PNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       233 ~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      +.+.+++..|+ .||++|||++++++
T Consensus       241 ~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         241 DRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             HHHHHHHHHHh-cCcccccCHHHHHH
Confidence            88899999998 59999999999975


No 360
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00  E-value=9.5e-39  Score=322.85  Aligned_cols=251  Identities=26%  Similarity=0.414  Sum_probs=207.6

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCc----EEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGE----KVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIF   82 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~   82 (568)
                      .++|++.+.||+|+||.||+|.+..+|.    .+|+|.+...........+.+|+.+++.++||||+++++++... ..+
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~   84 (303)
T cd05110           6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ   84 (303)
T ss_pred             hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence            3578999999999999999999887776    46888876543323334678899999999999999999998654 467


Q ss_pred             EEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          83 MVIEYCPGGELLDHIVERQ-RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      +++||+++|+|.+++.... .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus        85 ~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~  164 (303)
T cd05110          85 LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK  164 (303)
T ss_pred             eeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCccc
Confidence            9999999999999987654 689999999999999999999999999999999999999999999999999876543211


Q ss_pred             c-ccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCChHHHHH
Q psy6203         162 S-QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQI  238 (568)
Q Consensus       162 ~-~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~l  238 (568)
                      . ......++..|+|||.+.+.. ++.++|||||||++|+|++ |..||.+.........+..+. ++.++..+..+.++
T Consensus       165 ~~~~~~~~~~~~y~~PE~~~~~~-~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  243 (303)
T cd05110         165 EYNADGGKMPIKWMALECIHYRK-FTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKGERLPQPPICTIDVYMV  243 (303)
T ss_pred             ccccCCCccccccCCHHHhccCC-CChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHH
Confidence            1 122234577899999988766 5889999999999999997 999998877666655555443 33445578899999


Q ss_pred             HHHccccCcCCCCCHHHHhcC
Q psy6203         239 VRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       239 i~~~L~~dP~~Rps~~ell~h  259 (568)
                      +.+|+..+|++||++.+++..
T Consensus       244 i~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         244 MVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             HHHHcCCChhhCcCHHHHHHH
Confidence            999999999999999998874


No 361
>KOG1187|consensus
Probab=100.00  E-value=7.4e-39  Score=326.81  Aligned_cols=248  Identities=26%  Similarity=0.394  Sum_probs=198.3

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCC-EEEEEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSS-HIFMVI   85 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~-~~~lV~   85 (568)
                      .++|.-...||+|+||.||+|.-. +|..||||.+....... ...|.+|+.++.+++|||+|+++++|.+.+ ..+||+
T Consensus        74 T~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LVY  151 (361)
T KOG1187|consen   74 TNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLVY  151 (361)
T ss_pred             HhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEEE
Confidence            357777889999999999999965 45899999877654332 456999999999999999999999999888 599999


Q ss_pred             eccCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcC---ceecCCCCCceEEcCCCCeEEEeecCccCCCCCC
Q psy6203          86 EYCPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLG---YAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL  160 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  160 (568)
                      ||+++|+|.+++....  .+++....+|+.+++.||+|||+..   ||||||||+|||+|++.+.||+|||+|+..... 
T Consensus       152 Eym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~-  230 (361)
T KOG1187|consen  152 EYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEG-  230 (361)
T ss_pred             EccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcc-
Confidence            9999999999998754  8999999999999999999999854   999999999999999999999999999655431 


Q ss_pred             ccccccc-cCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCC------HHHH-HHHHHcCCCC------
Q psy6203         161 ESQLQTS-CGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS------IDQL-YDKILNGKYT------  226 (568)
Q Consensus       161 ~~~~~~~-~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~------~~~~-~~~i~~~~~~------  226 (568)
                      .....+. .||.+|+|||++.... .+.++|||||||++.|++||+.|.+...      ..+. ...+..+...      
T Consensus       231 ~~~~~~~~~gt~gY~~PEy~~~g~-lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~  309 (361)
T KOG1187|consen  231 DTSVSTTVMGTFGYLAPEYASTGK-LTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPR  309 (361)
T ss_pred             ccceeeecCCCCccCChhhhccCC-cCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCC
Confidence            2222233 7999999999998755 5899999999999999999998876432      1111 1223332211      


Q ss_pred             CC-CCCC--hH---HHHHHHHccccCcCCCCCHHHHhc
Q psy6203         227 EP-PWMS--PN---SRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       227 ~~-~~~~--~~---~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      .. ...+  ..   +..+..+|++.+|.+||++.|++.
T Consensus       310 l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  310 LKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             ccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence            01 1122  22   456778999999999999999754


No 362
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00  E-value=1.4e-38  Score=314.25  Aligned_cols=244  Identities=23%  Similarity=0.355  Sum_probs=198.7

Q ss_pred             eeecccCCeEEEEEEEcC---CCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEE-eCCEEEEEEeccC
Q psy6203          14 RTVGSGGFAKVKLATHVL---TGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIE-TSSHIFMVIEYCP   89 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~-~~~~~~lV~E~~~   89 (568)
                      +.||+|+||.||+|.+..   .+..+|+|.+...........+.+|+.+++.++||||+++++++. .++..++||||+.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            468999999999998653   345799998764332233457778999999999999999999765 4556899999999


Q ss_pred             CCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc---cccc
Q psy6203          90 GGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE---SQLQ  165 (568)
Q Consensus        90 ~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~---~~~~  165 (568)
                      +++|.+++... ...++..+..++.||+.||.|||+.+++||||||+|||++.++.+||+|||++........   ....
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  160 (262)
T cd05058          81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHT  160 (262)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeecccc
Confidence            99999999764 4567788889999999999999999999999999999999999999999999875432111   0111


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCChHHHHHHHHcc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-TEPPWMSPNSRQIVRSML  243 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~L  243 (568)
                      ...++..|+|||.+.+.. ++.++|||||||++|+|++ |.+||...+.......+..+.. ..+...++.+.+++.+||
T Consensus       161 ~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  239 (262)
T cd05058         161 GAKLPVKWMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQPEYCPDPLYEVMLSCW  239 (262)
T ss_pred             cCcCCccccChhHhccCc-cchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHc
Confidence            234567899999987765 5889999999999999999 5777887777777766666543 334557889999999999


Q ss_pred             ccCcCCCCCHHHHhc
Q psy6203         244 QVEPGKRIKIQDLLG  258 (568)
Q Consensus       244 ~~dP~~Rps~~ell~  258 (568)
                      +.+|++||++.|++.
T Consensus       240 ~~~p~~Rp~~~~il~  254 (262)
T cd05058         240 HPKPEMRPTFSELVS  254 (262)
T ss_pred             CCChhhCCCHHHHHH
Confidence            999999999999986


No 363
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00  E-value=9.2e-39  Score=316.94  Aligned_cols=244  Identities=22%  Similarity=0.380  Sum_probs=204.0

Q ss_pred             eeecccCCeEEEEEEEcCCC------cEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203          14 RTVGSGGFAKVKLATHVLTG------EKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~------~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      +.||+|+||.||+|.+...+      ..+|+|.+...........+.+|+.+++.++||||+++++++...+..++||||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            46899999999999976544      679999886544334456788899999999999999999999999999999999


Q ss_pred             cCCCChHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCC-----CeEEEeecCccC
Q psy6203          88 CPGGELLDHIVER-------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQ-----NLKLIDFGLCAK  155 (568)
Q Consensus        88 ~~~g~L~~~i~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-----~~kl~DFG~a~~  155 (568)
                      +++++|.+++...       ..+++..+..++.|++.||.|||+.+++|+||||+||+++.++     .++|+|||++..
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~  160 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARD  160 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccc
Confidence            9999999999642       3478899999999999999999999999999999999999877     899999999875


Q ss_pred             CCCCCc-cccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcC-CCCCCCCCC
Q psy6203         156 PEGGLE-SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNG-KYTEPPWMS  232 (568)
Q Consensus       156 ~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~-~~~~~~~~~  232 (568)
                      ...... .......++..|+|||.+.+.. ++.++|||||||++|+|++ |..||...+..+....+..+ .+..+...+
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (269)
T cd05044         161 IYKSDYYRKEGEGLLPVRWMAPESLLDGK-FTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGRLQKPENCP  239 (269)
T ss_pred             cccccccccCcccCCCccccCHHHHccCC-cccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCccCCcccch
Confidence            432211 1112234577899999998766 5899999999999999998 99999887776666666544 334556688


Q ss_pred             hHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         233 PNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       233 ~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      ..+.++|.+||+.+|.+||+++++++
T Consensus       240 ~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         240 DKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            99999999999999999999999875


No 364
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00  E-value=2.2e-38  Score=314.41  Aligned_cols=244  Identities=19%  Similarity=0.292  Sum_probs=193.3

Q ss_pred             eeecccCCeEEEEEEEc--CCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCC
Q psy6203          14 RTVGSGGFAKVKLATHV--LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGG   91 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g   91 (568)
                      +.||+|+||.||+|...  .++..+|+|.+...........+.+|+.++++++||||+++++.+.+....++||||+++|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            46899999999999754  3556799998875543333446788999999999999999999999989999999999999


Q ss_pred             ChHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc-cccc
Q psy6203          92 ELLDHIVERQ-----RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE-SQLQ  165 (568)
Q Consensus        92 ~L~~~i~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-~~~~  165 (568)
                      +|.+++....     ..++..+..++.|++.||.|||+.|++||||||+||+++.++.+||+|||++........ ....
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~  160 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVTPD  160 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeecCC
Confidence            9999987532     356778889999999999999999999999999999999999999999999865332211 1112


Q ss_pred             cccCCccccccccccCcc------cCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHc-CCCCC-----CCCCC
Q psy6203         166 TSCGSPNYAAPEVIKGKQ------YYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILN-GKYTE-----PPWMS  232 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~------~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~-~~~~~-----~~~~~  232 (568)
                      ...+++.|+|||++.+..      .++.++|||||||++|+|++ |..||......+....... .....     ....+
T Consensus       161 ~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (269)
T cd05087         161 QLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLS  240 (269)
T ss_pred             CcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCC
Confidence            345788899999986421      24779999999999999996 9999987665554333222 22211     12357


Q ss_pred             hHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         233 PNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       233 ~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      +.+.+++.+|+ .+|++|||++||+.
T Consensus       241 ~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         241 DRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             hHHHHHHHHHh-cCcccCCCHHHHHH
Confidence            88999999998 68999999999974


No 365
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00  E-value=2.3e-38  Score=311.43  Aligned_cols=240  Identities=26%  Similarity=0.438  Sum_probs=204.9

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEec
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEY   87 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~   87 (568)
                      ++|++.+.||+|+||.||++.  .+++.||+|.+....   ....+.+|+.++++++||||+++++++... ..++||||
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~---~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~   79 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV---TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMEL   79 (254)
T ss_pred             HHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc---hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEEC
Confidence            579999999999999999986  478899999986432   335678899999999999999999998654 47999999


Q ss_pred             cCCCChHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          88 CPGGELLDHIVERQ--RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        88 ~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      +++++|.+++....  .+++..+..++.|++.||.|||++|++||||||+||+++.++.+||+|||++......    ..
T Consensus        80 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~----~~  155 (254)
T cd05083          80 MSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG----VD  155 (254)
T ss_pred             CCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc----CC
Confidence            99999999997643  5789999999999999999999999999999999999999999999999998754321    11


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCChHHHHHHHHcc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-TEPPWMSPNSRQIVRSML  243 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~L  243 (568)
                      ....+..|+|||.+.+.. ++.++|+|||||++|+|++ |..||...+..+....+..+.. ..+..+++.+.+++.+||
T Consensus       156 ~~~~~~~y~~pe~~~~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  234 (254)
T cd05083         156 NSKLPVKWTAPEALKHKK-FSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRMEPPEGCPADVYVLMTSCW  234 (254)
T ss_pred             CCCCCceecCHHHhccCC-cCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCCCCCcCCHHHHHHHHHHc
Confidence            223456899999987665 5889999999999999997 9999998888777777766532 334557899999999999


Q ss_pred             ccCcCCCCCHHHHhc
Q psy6203         244 QVEPGKRIKIQDLLG  258 (568)
Q Consensus       244 ~~dP~~Rps~~ell~  258 (568)
                      +.+|++||++++++.
T Consensus       235 ~~~p~~Rp~~~~l~~  249 (254)
T cd05083         235 ETEPKKRPSFHKLRE  249 (254)
T ss_pred             CCChhhCcCHHHHHH
Confidence            999999999999975


No 366
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00  E-value=1.8e-38  Score=312.85  Aligned_cols=236  Identities=20%  Similarity=0.250  Sum_probs=194.3

Q ss_pred             eeecccCCeEEEEEEEcCCC----------cEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEE
Q psy6203          14 RTVGSGGFAKVKLATHVLTG----------EKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFM   83 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~~----------~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l   83 (568)
                      +.||+|+||.||+|.+..++          ..+++|++......  ...+.+|+.+++.++||||+++++++.. ...++
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~l   77 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD--SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIM   77 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh--HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEE
Confidence            46899999999999998776          35788877644321  5678889999999999999999999887 77899


Q ss_pred             EEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCC-------CeEEEeecCccC
Q psy6203          84 VIEYCPGGELLDHIVERQ-RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQ-------NLKLIDFGLCAK  155 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-------~~kl~DFG~a~~  155 (568)
                      ||||+++|+|.+++.... .+++..+..++.||+.||.|||++||+||||||+||+++.++       .+||+|||++..
T Consensus        78 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~  157 (259)
T cd05037          78 VEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPIT  157 (259)
T ss_pred             EEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcccc
Confidence            999999999999998765 789999999999999999999999999999999999999887       799999999876


Q ss_pred             CCCCCccccccccCCccccccccccCc-ccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCCCCCCCCCh
Q psy6203         156 PEGGLESQLQTSCGSPNYAAPEVIKGK-QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKYTEPPWMSP  233 (568)
Q Consensus       156 ~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  233 (568)
                      ...     .....++..|+|||++.+. ..++.++|||||||++|+|++ |..||...+........... ...+.....
T Consensus       158 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~  231 (259)
T cd05037         158 VLS-----REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQ-HRLPMPDCA  231 (259)
T ss_pred             ccc-----ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcC-CCCCCCCch
Confidence            432     1233567789999999776 346889999999999999999 68888766544333333222 222222347


Q ss_pred             HHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         234 NSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       234 ~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      .+.++|.+||..+|.+|||+.++++
T Consensus       232 ~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         232 ELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             HHHHHHHHHhccChhhCCCHHHHHH
Confidence            8999999999999999999999985


No 367
>KOG1095|consensus
Probab=100.00  E-value=8.7e-39  Score=349.73  Aligned_cols=251  Identities=25%  Similarity=0.415  Sum_probs=217.2

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCc-----EEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGE-----KVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHI   81 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~-----~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~   81 (568)
                      ...-++...||+|+||.||.|.-.....     .||+|.+++.........|.+|..+|+.++|||||++++++-+....
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~  770 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP  770 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence            3456788999999999999998654322     49999998776556677899999999999999999999999999999


Q ss_pred             EEEEeccCCCChHHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCcc
Q psy6203          82 FMVIEYCPGGELLDHIVER-------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCA  154 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~-------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~  154 (568)
                      +|++|||+||+|..+|++.       ..++..+...++.||++|.+||+++++|||||...|+|++....+||+|||+|+
T Consensus       771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlAr  850 (1025)
T KOG1095|consen  771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLAR  850 (1025)
T ss_pred             EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhH
Confidence            9999999999999999875       348889999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccccccc-cCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHH-HHcCCCCCCCCC
Q psy6203         155 KPEGGLESQLQTS-CGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDK-ILNGKYTEPPWM  231 (568)
Q Consensus       155 ~~~~~~~~~~~~~-~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~-i~~~~~~~~~~~  231 (568)
                      ............. .-...|||||.+.... ++.++|||||||++||++| |..||.+.+..+++.. ...|..+.|+..
T Consensus       851 Diy~~~yyr~~~~a~lPvkWm~PEsl~d~i-FtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~~C  929 (1025)
T KOG1095|consen  851 DIYDKDYYRKHGEAMLPVKWMPPESLKDGI-FTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPSYC  929 (1025)
T ss_pred             hhhhchheeccCccccceecCCHHHHhhcc-cccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCCCC
Confidence            5443222221111 2245899999998755 7999999999999999999 9999999988888874 455677888889


Q ss_pred             ChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         232 SPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       232 ~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      +..+.+++..||+.+|++||++..|++
T Consensus       930 P~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  930 PEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             ChHHHHHHHHHccCChhhCccHHHHHh
Confidence            999999999999999999999999987


No 368
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00  E-value=4.5e-38  Score=312.14  Aligned_cols=244  Identities=18%  Similarity=0.288  Sum_probs=192.8

Q ss_pred             eeecccCCeEEEEEEEcCC--CcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCC
Q psy6203          14 RTVGSGGFAKVKLATHVLT--GEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGG   91 (568)
Q Consensus        14 ~~lG~G~~g~V~~~~~~~~--~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g   91 (568)
                      +.||+|+||.||+|.....  ...+++|.+...........+.+|+.+++.++||||+++++.+.+....|+||||+++|
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   80 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG   80 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence            3699999999999975433  23466776655433334567888999999999999999999999999999999999999


Q ss_pred             ChHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCC-Ccccccc
Q psy6203          92 ELLDHIVER----QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGG-LESQLQT  166 (568)
Q Consensus        92 ~L~~~i~~~----~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~-~~~~~~~  166 (568)
                      +|.+++.+.    ...++..+..++.||+.||+|||+.+|+||||||+|||++.++.++|+|||++...... .......
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~  160 (268)
T cd05086          81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDD  160 (268)
T ss_pred             cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcccC
Confidence            999999764    34567788899999999999999999999999999999999999999999987543221 1112234


Q ss_pred             ccCCccccccccccCc------ccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC------CCCCCCCh
Q psy6203         167 SCGSPNYAAPEVIKGK------QYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY------TEPPWMSP  233 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~------~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~------~~~~~~~~  233 (568)
                      .+++..|+|||++...      ..++.++|||||||++|+|++ |..||...+..+....+..+..      ..+...++
T Consensus       161 ~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (268)
T cd05086         161 KCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSE  240 (268)
T ss_pred             CcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcH
Confidence            5688999999997532      124678999999999999997 5789987776666655543321      12334688


Q ss_pred             HHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         234 NSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       234 ~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      .+.+++..|+ .+|++|||++++++
T Consensus       241 ~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         241 RWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             HHHHHHHHHh-hCcccCCCHHHHHH
Confidence            8999999999 68999999999964


No 369
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00  E-value=4e-38  Score=315.09  Aligned_cols=250  Identities=28%  Similarity=0.427  Sum_probs=199.4

Q ss_pred             ccCeEEEeeecccCCeEEEEEE----EcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEe--CCE
Q psy6203           7 RNQYILERTVGSGGFAKVKLAT----HVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIET--SSH   80 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~----~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~--~~~   80 (568)
                      ..+|++.+.||+|+||.||+|.    +..++..||+|.+.... ......+.+|+.++++++||||+++++++..  ...
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   81 (284)
T cd05081           3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST-AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN   81 (284)
T ss_pred             cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCc
Confidence            3589999999999999999997    44578899999986543 2234578899999999999999999998743  346


Q ss_pred             EEEEEeccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCC
Q psy6203          81 IFMVIEYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGG  159 (568)
Q Consensus        81 ~~lV~E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  159 (568)
                      +++||||+++++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~  161 (284)
T cd05081          82 LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQD  161 (284)
T ss_pred             eEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCC
Confidence            89999999999999999764 56899999999999999999999999999999999999999999999999998865432


Q ss_pred             Cccc--cccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHH----------------HHHHHHH
Q psy6203         160 LESQ--LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID----------------QLYDKIL  221 (568)
Q Consensus       160 ~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~----------------~~~~~i~  221 (568)
                      ....  .....++..|+|||++.+.. ++.++|||||||++|+|++|..|+......                .+.+.+.
T Consensus       162 ~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (284)
T cd05081         162 KEYYKVREPGESPIFWYAPESLTESK-FSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLK  240 (284)
T ss_pred             CcceeecCCCCCceEeeCHHHhccCC-cChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHh
Confidence            2111  11122345699999998765 588999999999999999987775432211                1111122


Q ss_pred             cC-CCCCCCCCChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         222 NG-KYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       222 ~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      .+ ..+.+..++.++.+|+.+||..+|++|||+.|++.
T Consensus       241 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         241 NNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             cCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            22 22334567889999999999999999999999975


No 370
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00  E-value=4.3e-38  Score=312.24  Aligned_cols=248  Identities=25%  Similarity=0.483  Sum_probs=209.5

Q ss_pred             CeEEEeeecccCCeEEEEEEEcC-CCcEEEEEEeecCCc---------CCchHHHHHHHHHHHh-CCCCCcceeeEEEEe
Q psy6203           9 QYILERTVGSGGFAKVKLATHVL-TGEKVAIKIMKKATL---------GEDLPRVKLEINALKH-ISHQHICKLFQVIET   77 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~---------~~~~~~~~~Ei~~l~~-l~hpnIv~l~~~~~~   77 (568)
                      .|++.+.||+|+||.||+|.+.. +++.+|+|.+.....         ......+..|+.++.+ ++||||+++++++..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            48899999999999999999987 678999998864321         1123456678887765 799999999999999


Q ss_pred             CCEEEEEEeccCCCChHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH-cCceecCCCCCceEEcCCCCeEEEeecC
Q psy6203          78 SSHIFMVIEYCPGGELLDHIVE----RQRLGEKESRAFFRQILSAVAYLHH-LGYAHRDLKPENVLLDRNQNLKLIDFGL  152 (568)
Q Consensus        78 ~~~~~lV~E~~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFG~  152 (568)
                      .+..++||||+++++|.+.+..    ...+++..++.++.|++.||.|||+ .|++|+||+|+||+++.++.++|+|||.
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~  160 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL  160 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence            9999999999999999988743    3568999999999999999999996 7899999999999999999999999999


Q ss_pred             ccCCCCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC-C-CC
Q psy6203         153 CAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE-P-PW  230 (568)
Q Consensus       153 a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~-~-~~  230 (568)
                      +.......  ......|+..|+|||.+.+.. ++.++|+||||+++|+|++|..||...........+..+.... + ..
T Consensus       161 ~~~~~~~~--~~~~~~~~~~~~~Pe~~~~~~-~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  237 (269)
T cd08528         161 AKQKQPES--KLTSVVGTILYSCPEIVKNEP-YGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGM  237 (269)
T ss_pred             eeeccccc--ccccccCcccCcChhhhcCCC-CchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCccc
Confidence            87654322  334456899999999998765 5899999999999999999999998887777777776665432 2 25


Q ss_pred             CChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         231 MSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       231 ~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      .++.+.++|.+||+.||++||++.|+..+
T Consensus       238 ~~~~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         238 YSEDVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             CCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence            78999999999999999999999998764


No 371
>KOG1151|consensus
Probab=100.00  E-value=2.1e-39  Score=316.30  Aligned_cols=259  Identities=28%  Similarity=0.468  Sum_probs=215.5

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCc------hHHHHHHHHHHHhCCCCCcceeeEEEE-e
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED------LPRVKLEINALKHISHQHICKLFQVIE-T   77 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~------~~~~~~Ei~~l~~l~hpnIv~l~~~~~-~   77 (568)
                      -+.++|-++..||+|||+.||+|.+....+.||||+-.......+      .+..-+|..|.+.|+||.||++|++|. +
T Consensus       460 tLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD  539 (775)
T KOG1151|consen  460 TLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD  539 (775)
T ss_pred             chHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence            356789999999999999999999999999999998654433222      234567999999999999999999995 5


Q ss_pred             CCEEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc--CceecCCCCCceEEcC---CCCeEEEeecC
Q psy6203          78 SSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL--GYAHRDLKPENVLLDR---NQNLKLIDFGL  152 (568)
Q Consensus        78 ~~~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~--~ivHrDlkp~NIll~~---~~~~kl~DFG~  152 (568)
                      .+.+|-|+|||+|.+|.-+++..+.++|.+++.|+.||+.||.||.+.  .|||-||||.|||+..   .|.+||+|||+
T Consensus       540 tdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGL  619 (775)
T KOG1151|consen  540 TDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGL  619 (775)
T ss_pred             cccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecch
Confidence            667899999999999999999999999999999999999999999865  6999999999999943   46899999999


Q ss_pred             ccCCCCCCc------cccccccCCccccccccccC---cccCCcccceechhhHHHHHHhCCCCCCCCCHH-HHHH--HH
Q psy6203         153 CAKPEGGLE------SQLQTSCGSPNYAAPEVIKG---KQYYGSETDVWSMGVMLYALLCGFLPFDSDSID-QLYD--KI  220 (568)
Q Consensus       153 a~~~~~~~~------~~~~~~~gt~~y~aPE~l~~---~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~-~~~~--~i  220 (568)
                      ++...+...      .......||-+|++||.+.-   .+..+.++||||+|||+|..+.|+.||..+... .+.+  .|
T Consensus       620 SKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTI  699 (775)
T KOG1151|consen  620 SKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTI  699 (775)
T ss_pred             hhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhch
Confidence            987654322      12344579999999999852   344688999999999999999999999765432 2221  22


Q ss_pred             Hc---CCCCCCCCCChHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q psy6203         221 LN---GKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       221 ~~---~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                      ++   -.++..+.+++++++||++||++.-++|..+.++..||||.
T Consensus       700 lkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyll  745 (775)
T KOG1151|consen  700 LKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLL  745 (775)
T ss_pred             hcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCcccc
Confidence            22   24555677999999999999999999999999999999997


No 372
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00  E-value=1.1e-37  Score=313.71  Aligned_cols=250  Identities=17%  Similarity=0.227  Sum_probs=192.0

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCC---CcEEEEEEeecCCcCCchH----------HHHHHHHHHHhCCCCCcceee
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLT---GEKVAIKIMKKATLGEDLP----------RVKLEINALKHISHQHICKLF   72 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~---~~~vavK~~~~~~~~~~~~----------~~~~Ei~~l~~l~hpnIv~l~   72 (568)
                      ..++|++.+.||+|+||+||+|.+..+   +..+|+|+..........+          ....+...+..++|+||++++
T Consensus        10 ~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~   89 (294)
T PHA02882         10 TGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYY   89 (294)
T ss_pred             CCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEE
Confidence            457899999999999999999998877   6677888644322110000          112233445667899999999


Q ss_pred             EEEEeCC----EEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEE
Q psy6203          73 QVIETSS----HIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLI  148 (568)
Q Consensus        73 ~~~~~~~----~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~  148 (568)
                      +......    ..+++||++ ..++.+.+......++..+..++.|++.||.|||+++|+||||||+|||++.++.++|+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~  168 (294)
T PHA02882         90 GCGSFKRCRMYYRFILLEKL-VENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYII  168 (294)
T ss_pred             EeeeEecCCceEEEEEEehh-ccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEE
Confidence            8765443    457888988 45677777665567899999999999999999999999999999999999999999999


Q ss_pred             eecCccCCCCCCc------cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCH-H-------
Q psy6203         149 DFGLCAKPEGGLE------SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSI-D-------  214 (568)
Q Consensus       149 DFG~a~~~~~~~~------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~-~-------  214 (568)
                      |||+|+.......      .......||+.|+|||++.+.. ++.++|||||||++|+|++|.+||.+.+. .       
T Consensus       169 DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~-~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~  247 (294)
T PHA02882        169 DYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGAC-VTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAK  247 (294)
T ss_pred             EcCCceeeccCCcccccccccccccCCCccccCHHHhCCCC-CCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhH
Confidence            9999875432111      1122346999999999998776 59999999999999999999999976632 1       


Q ss_pred             -HHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         215 -QLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       215 -~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                       +....+..+... .+..++.+.++++.|+..+|++||+.+++++
T Consensus       248 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        248 CDFIKRLHEGKIK-IKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HHHHHHhhhhhhc-cCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence             223344444333 2345789999999999999999999999875


No 373
>KOG0668|consensus
Probab=100.00  E-value=1.4e-39  Score=293.09  Aligned_cols=248  Identities=27%  Similarity=0.529  Sum_probs=207.0

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCC-CCCcceeeEEEEeCC--EEEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS-HQHICKLFQVIETSS--HIFM   83 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~--~~~l   83 (568)
                      .++|++.+++|+|.++.|+.|.+..++++++||+++...    .+.+.+|++||..|. ||||++++++..+..  ..-+
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk----kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL  112 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK----KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL  112 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH----HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence            468999999999999999999999999999999998543    457899999999997 999999999987653  5679


Q ss_pred             EEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCC-CCeEEEeecCccCCCCCCcc
Q psy6203          84 VIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRN-QNLKLIDFGLCAKPEGGLES  162 (568)
Q Consensus        84 V~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~-~~~kl~DFG~a~~~~~~~~~  162 (568)
                      |+||+.+.+...+.   ..++..+++.++.+++.||.|||++||+|||+||.|++|+.. -.++|+|+|+|.....+.+ 
T Consensus       113 iFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~e-  188 (338)
T KOG0668|consen  113 IFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKE-  188 (338)
T ss_pred             HhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCce-
Confidence            99999887766554   458899999999999999999999999999999999999865 4699999999998877643 


Q ss_pred             ccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCC-CCC-CHHHHHHH--HH----------c------
Q psy6203         163 QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPF-DSD-SIDQLYDK--IL----------N------  222 (568)
Q Consensus       163 ~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf-~~~-~~~~~~~~--i~----------~------  222 (568)
                       .+..+.+..|--||++..-+.|+..-|+|||||++..|+..+-|| .+. +.+++.+-  +.          .      
T Consensus       189 -YnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ld  267 (338)
T KOG0668|consen  189 -YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLD  267 (338)
T ss_pred             -eeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCC
Confidence             355678899999999998888899999999999999999999887 333 33332211  10          0      


Q ss_pred             -------CCCCCC-----------CCCChHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q psy6203         223 -------GKYTEP-----------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       223 -------~~~~~~-----------~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                             +...-.           ..+++++.||+.++|.+|-.+|+|+.|++.||||.
T Consensus       268 p~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~  326 (338)
T KOG0668|consen  268 PQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFA  326 (338)
T ss_pred             hhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHH
Confidence                   011100           12579999999999999999999999999999997


No 374
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00  E-value=6.5e-38  Score=313.19  Aligned_cols=250  Identities=27%  Similarity=0.444  Sum_probs=203.8

Q ss_pred             cCeEEEeeecccCCeEEEEEEEc----CCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEe--CCEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHV----LTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIET--SSHI   81 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~----~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~--~~~~   81 (568)
                      ..|++.+.||+|+||.||+|...    .++..+|+|++...........+.+|+++++.++||||+++++++..  ....
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~   83 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL   83 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence            56888999999999999999864    34789999999765433235678899999999999999999999877  5578


Q ss_pred             EEEEeccCCCChHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC
Q psy6203          82 FMVIEYCPGGELLDHIVERQ-RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL  160 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~  160 (568)
                      ++||||+++++|.+++.... .+++..+..++.|++.||+|||++|++|+||||+||+++.++.++|+|||.+.......
T Consensus        84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  163 (284)
T cd05038          84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDK  163 (284)
T ss_pred             EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCC
Confidence            99999999999999997654 68999999999999999999999999999999999999999999999999987654321


Q ss_pred             cc--ccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHH---------------HHHHHHHcC
Q psy6203         161 ES--QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID---------------QLYDKILNG  223 (568)
Q Consensus       161 ~~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~---------------~~~~~i~~~  223 (568)
                      ..  ......++..|+|||.+.+.. ++.++||||||+++|+|++|..||......               .+...+..+
T Consensus       164 ~~~~~~~~~~~~~~~~~Pe~~~~~~-~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (284)
T cd05038         164 DYYYVKEPGESPIFWYAPECLRTSK-FSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEG  242 (284)
T ss_pred             cceeccCCCCCcccccCcHHHccCC-CCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcC
Confidence            11  111223456799999987765 588999999999999999999998653221               122222222


Q ss_pred             -CCCCCCCCChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         224 -KYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       224 -~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                       ..+.+...+.++.+++.+||+.+|.+|||+.|+++
T Consensus       243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         243 ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence             22334556789999999999999999999999975


No 375
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00  E-value=9.5e-38  Score=310.34  Aligned_cols=249  Identities=25%  Similarity=0.406  Sum_probs=204.7

Q ss_pred             eEEEeeecccCCeEEEEEEEcC---CCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCC------
Q psy6203          10 YILERTVGSGGFAKVKLATHVL---TGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSS------   79 (568)
Q Consensus        10 Y~i~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~------   79 (568)
                      |.+.++||+|+||.||+|....   ++..||+|++...... ...+.+.+|+.+++.++||||+++++++....      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~   80 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP   80 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence            6788999999999999998643   5789999998754322 23456788999999999999999999886432      


Q ss_pred             EEEEEEeccCCCChHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCc
Q psy6203          80 HIFMVIEYCPGGELLDHIVER------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLC  153 (568)
Q Consensus        80 ~~~lV~E~~~~g~L~~~i~~~------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a  153 (568)
                      ..++++||+.+|+|.+++...      ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||++
T Consensus        81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~  160 (273)
T cd05074          81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLS  160 (273)
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECccccc
Confidence            347899999999998887532      24788999999999999999999999999999999999999999999999998


Q ss_pred             cCCCCCCc-cccccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCC
Q psy6203         154 AKPEGGLE-SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPW  230 (568)
Q Consensus       154 ~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~  230 (568)
                      ........ .......+++.|++||.+.+.. ++.++|||||||++|+|++ |.+||.+.+.......+..+. ...++.
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~-~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  239 (273)
T cd05074         161 KKIYSGDYYRQGCASKLPVKWLALESLADNV-YTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRLKQPPD  239 (273)
T ss_pred             ccccCCcceecCCCccCchhhcCHhHHhcCc-cchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcCCCCCC
Confidence            76433211 1112334567899999987765 5889999999999999999 899998888777777666553 344556


Q ss_pred             CChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         231 MSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       231 ~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      .++.+.+++.+||+.+|++|||+.+++.+
T Consensus       240 ~~~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         240 CLEDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            78999999999999999999999999863


No 376
>KOG1006|consensus
Probab=100.00  E-value=5.3e-40  Score=302.04  Aligned_cols=254  Identities=24%  Similarity=0.401  Sum_probs=210.5

Q ss_pred             EEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHH-hCCCCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          12 LERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK-HISHQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        12 i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~-~l~hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      -+..||.|+||+|++-.++.+|+..|||.+.......+..++..|.+... .-++||||++|+..-.++..+|.||+++ 
T Consensus        68 dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-  146 (361)
T KOG1006|consen   68 DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-  146 (361)
T ss_pred             HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-
Confidence            35679999999999999999999999999988776666677888887654 4469999999999989999999999994 


Q ss_pred             CChHHHHH-----hcCCCCHHHHHHHHHHHHHHHHHHHH-cCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          91 GELLDHIV-----ERQRLGEKESRAFFRQILSAVAYLHH-LGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        91 g~L~~~i~-----~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      .+|..+..     ++..++|..+-.|..-.+.||.||-. .+|||||+||+|||++..|.+||||||++.....+..  .
T Consensus       147 ~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiA--k  224 (361)
T KOG1006|consen  147 ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIA--K  224 (361)
T ss_pred             hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHH--h
Confidence            46554432     35679999999999999999999975 5899999999999999999999999999876554321  2


Q ss_pred             ccccCCccccccccccCccc-CCcccceechhhHHHHHHhCCCCCCCC-CHHHHHHHHHcCCCCCC------CCCChHHH
Q psy6203         165 QTSCGSPNYAAPEVIKGKQY-YGSETDVWSMGVMLYALLCGFLPFDSD-SIDQLYDKILNGKYTEP------PWMSPNSR  236 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~-~~~~~DiwSlG~il~~lltG~~pf~~~-~~~~~~~~i~~~~~~~~------~~~~~~~~  236 (568)
                      +...|...|||||.+..... |+-+||+||||++|||+.||..|+.+- +.-+....+..|.++..      -..+..+.
T Consensus       225 T~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~  304 (361)
T KOG1006|consen  225 TVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMV  304 (361)
T ss_pred             hhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHH
Confidence            33468889999999965443 788999999999999999999999763 34455556667766532      23788999


Q ss_pred             HHHHHccccCcCCCCCHHHHhcCcccccCCCC
Q psy6203         237 QIVRSMLQVEPGKRIKIQDLLGHNWVKMGPED  268 (568)
Q Consensus       237 ~li~~~L~~dP~~Rps~~ell~hp~~~~~~~~  268 (568)
                      .+|..||.+|-+.||+..+++.+||++.....
T Consensus       305 ~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~  336 (361)
T KOG1006|consen  305 RFINTCLIKDRSDRPKYDDLKKFPFYRMYAVE  336 (361)
T ss_pred             HHHHHHhhcccccCcchhhhhcCchhhhhhhc
Confidence            99999999999999999999999999965443


No 377
>KOG4250|consensus
Probab=100.00  E-value=6.6e-39  Score=331.21  Aligned_cols=241  Identities=32%  Similarity=0.488  Sum_probs=197.3

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCC------EEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSS------HIF   82 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~------~~~   82 (568)
                      .+...+.||+|+||.||+++++.||+.||||.+++.......+..-+|+++|++|+|||||+++++-++..      ...
T Consensus        14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v   93 (732)
T KOG4250|consen   14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV   93 (732)
T ss_pred             ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence            34556889999999999999999999999999987665556778889999999999999999999865443      468


Q ss_pred             EEEeccCCCChHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEc--CCC--CeEEEeecCccC
Q psy6203          83 MVIEYCPGGELLDHIVE---RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLD--RNQ--NLKLIDFGLCAK  155 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~--~~~--~~kl~DFG~a~~  155 (568)
                      +|||||.||||...+.+   ...+++.+.+.++..++.||.|||++||+||||||.||++.  .+|  ..||+|||.|+.
T Consensus        94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Are  173 (732)
T KOG4250|consen   94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARE  173 (732)
T ss_pred             EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeeccccccc
Confidence            99999999999999974   35699999999999999999999999999999999999984  334  369999999998


Q ss_pred             CCCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCC----CHHHHHHHHHcCC-------
Q psy6203         156 PEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSD----SIDQLYDKILNGK-------  224 (568)
Q Consensus       156 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~----~~~~~~~~i~~~~-------  224 (568)
                      ...+  +...+.+||+.|.+||++....+|+..+|.|||||++|+++||..||...    +..++...+...+       
T Consensus       174 l~d~--s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~  251 (732)
T KOG4250|consen  174 LDDN--SLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIG  251 (732)
T ss_pred             CCCC--CeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEe
Confidence            7664  46778899999999999986566899999999999999999999999432    2223333332211       


Q ss_pred             --------------CCCCCCCChH----HHHHHHHccccCcCCCC
Q psy6203         225 --------------YTEPPWMSPN----SRQIVRSMLQVEPGKRI  251 (568)
Q Consensus       225 --------------~~~~~~~~~~----~~~li~~~L~~dP~~Rp  251 (568)
                                    ++.+..+++.    +-..+..+|..+|.+|-
T Consensus       252 ~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  252 AQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             eecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhC
Confidence                          2223334443    34678889999999998


No 378
>KOG0576|consensus
Probab=100.00  E-value=2.5e-39  Score=330.49  Aligned_cols=450  Identities=22%  Similarity=0.244  Sum_probs=306.0

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      +.+++|+++.++|+|+||.||+++++.+++..|+|+++... ..+...++.|+-+++..+|||||.+++.+...+..++.
T Consensus        12 nP~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep-~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwic   90 (829)
T KOG0576|consen   12 NPQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEP-GDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC   90 (829)
T ss_pred             CCccchhheeeecCCcccchhhhcccccCchhhheeeeccC-CccccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence            67889999999999999999999999999999999998654 35667788899999999999999999999999999999


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          85 IEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      ||||.||+|.+...-.++++|.++...++..+.||+|||++|=+|||||-.||++++.|.+|++|||.+..+.... ...
T Consensus        91 MEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati-~Kr  169 (829)
T KOG0576|consen   91 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATI-AKR  169 (829)
T ss_pred             EEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhh-hhh
Confidence            9999999999988888999999999999999999999999999999999999999999999999999988765432 234


Q ss_pred             ccccCCcccccccccc--CcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC-----CCCChHHHH
Q psy6203         165 QTSCGSPNYAAPEVIK--GKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEP-----PWMSPNSRQ  237 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~--~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~  237 (568)
                      ..+.||+.|||||+..  ....|...+|||++|++..|+-.-++|-...........+....+..|     ...++.+.+
T Consensus       170 ksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~  249 (829)
T KOG0576|consen  170 KSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHN  249 (829)
T ss_pred             hcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHH
Confidence            5678999999999863  233468899999999999999877777544333333334444444333     336788999


Q ss_pred             HHHHccccCcCCCCCHHHHhcCcccccCC-----------CCCCC--CCCCCCcCCcCCHHHHHHHHhccCCCHHHHHHH
Q psy6203         238 IVRSMLQVEPGKRIKIQDLLGHNWVKMGP-----------EDNPV--SFRPDHELREKDDDVIKVMADHKQLSPDDMWSQ  304 (568)
Q Consensus       238 li~~~L~~dP~~Rps~~ell~hp~~~~~~-----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  304 (568)
                      |++.+|.++|.+|||++.+|.|||+...-           ..+|.  .........+.-..+...+......+..++.. 
T Consensus       250 fvK~altknpKkRptaeklL~h~fvs~~l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i~~~i~s~~rs~~~~~~~-  328 (829)
T KOG0576|consen  250 FVKGALTKNPKKRPTAEKLLQHPFVSQTLSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWIPMRICSTGRSSALEMTV-  328 (829)
T ss_pred             HHHHHhcCCCccCCChhhheeceeeccchhhHHHHHHHHHccCCCCcccccccCCcccccchhhhhhcCCccccccCCh-
Confidence            99999999999999999999999997420           01111  11000000000000111111100000000000 


Q ss_pred             HHhcCCChhHHHHHHHhhhhccCCccCCCCcchhhhHHHHHHHHhCCCCCChhhHHHHHHHHhhccCcceeEEEccccCc
Q psy6203         305 LNEWTYNYDTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILSHFMPICTILISQYFPT  384 (568)
Q Consensus       305 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~~~~~~iki~dfG~~  384 (568)
                       .+..+.+....|.++.  ..+...+..+...+ ..|                          ..+.+....+..||+..
T Consensus       329 -se~~~~~~~~~~~~r~--et~~l~~l~~~~~~-~~d--------------------------~~l~s~~~~~~~~~~v~  378 (829)
T KOG0576|consen  329 -SEIALEQYQFAYPLRK--ETRPLAELHSSYKV-HRD--------------------------NILGSEEEVKLLDFAVP  378 (829)
T ss_pred             -hhHhhhhhhhhhhhhh--hccccccccccccc-Ccc--------------------------cccccccccccccccCC
Confidence             0000000001111111  11111111000000 000                          00223355677888843


Q ss_pred             ccccCCCCceecccccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC-----C
Q psy6203         385 ILLPCKVGQVINLLRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEP-----P  458 (568)
Q Consensus       385 ~~~~~~~~~~~~~~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~-----~  458 (568)
                      ..+  ......++..+|+.+++|++ ....+....|.||+|+--.+|.-|-+|-.+..  .....+..+. ..|     .
T Consensus       379 ~~L--~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~--~~~~~~g~~p-~s~~L~~~~  453 (829)
T KOG0576|consen  379 PQL--TRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSPP--AVLPMIGNGP-NSPMLTDKS  453 (829)
T ss_pred             ccc--CcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCCc--cccCCCCCCC-Cccccchhh
Confidence            332  22224677899999999996 77778889999999998888988988876521  1111111111 000     0


Q ss_pred             CCCHHH-HHHHHHccCCCcCCCCCHHHHhcCcccc
Q psy6203         459 WMSPNS-RQIVRSMLQVEPGKRIKIQDLLGHNWVK  492 (568)
Q Consensus       459 ~~s~~~-~~li~~~L~~dp~~R~t~~~~l~hp~~~  492 (568)
                      ..++.. .++...|+..-|..|.....++-|.+|.
T Consensus       454 aw~~~~~~~~~~~~~~g~P~~pkv~mgacfsKvfn  488 (829)
T KOG0576|consen  454 AWSPVFHRDFPAPCLNGLPPTPKVHMGACFSKVFN  488 (829)
T ss_pred             hcCcccccCCcccccCCCCCCCcchhhHHHHHHhc
Confidence            112222 2477889999999999999998888886


No 379
>KOG0587|consensus
Probab=100.00  E-value=6.3e-38  Score=329.71  Aligned_cols=258  Identities=28%  Similarity=0.465  Sum_probs=218.2

Q ss_pred             cccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEE-----e
Q psy6203           4 IDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIE-----T   77 (568)
Q Consensus         4 ~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~-----~   77 (568)
                      .+..+.++|.++||.|.+|.||+++++.+|+..|+|++....  +..+.++.|.++|+.+ .|||++.+|++|.     .
T Consensus        15 pdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~--d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~   92 (953)
T KOG0587|consen   15 PDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE--DEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGN   92 (953)
T ss_pred             CCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc--cccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCC
Confidence            355678999999999999999999999999999999987654  3345788899999988 4999999999984     3


Q ss_pred             CCEEEEEEeccCCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccC
Q psy6203          78 SSHIFMVIEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAK  155 (568)
Q Consensus        78 ~~~~~lV~E~~~~g~L~~~i~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~  155 (568)
                      ++.++||||||.||+..|++++  ..++.|+.+..|++.++.||.+||.+.++|||||-.|||++.++.|||+|||++..
T Consensus        93 ~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQ  172 (953)
T KOG0587|consen   93 GDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ  172 (953)
T ss_pred             CCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeee
Confidence            4689999999999999999975  46789999999999999999999999999999999999999999999999999887


Q ss_pred             CCCCCccccccccCCccccccccccCcc----cCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC---CC
Q psy6203         156 PEGGLESQLQTSCGSPNYAAPEVIKGKQ----YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT---EP  228 (568)
Q Consensus       156 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~----~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~---~~  228 (568)
                      .... ....++.+|||.|||||++...+    -|+..+|+||||++..||.-|.+|+....+...+-.|-...++   -+
T Consensus       173 ldsT-~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp  251 (953)
T KOG0587|consen  173 LDST-VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRP  251 (953)
T ss_pred             eecc-cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccch
Confidence            6543 33457889999999999996543    2567899999999999999999999766554333333222211   12


Q ss_pred             CCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         229 PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       229 ~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      ...+..+.++|..||.+|-.+||+..++|.|||++.
T Consensus       252 ~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e  287 (953)
T KOG0587|consen  252 KKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITE  287 (953)
T ss_pred             hhHHHHHHHHHHHHHhhccccCcchhhhccCCcccc
Confidence            346788999999999999999999999999999983


No 380
>KOG0590|consensus
Probab=100.00  E-value=7.7e-40  Score=352.67  Aligned_cols=483  Identities=24%  Similarity=0.404  Sum_probs=337.4

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcC-CCcEEEEEEeecCC-cCCchHHHHHHHHHHHhCC-CCCcceeeEEEEeCCEEEE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVL-TGEKVAIKIMKKAT-LGEDLPRVKLEINALKHIS-HQHICKLFQVIETSSHIFM   83 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~~~l   83 (568)
                      ...|.+.+.||+|+|+.|-++.... +...+|+|.+.... ..........|..+-+.+. |+|++.+++...+.+..++
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~   98 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL   98 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence            4678999999999999999887643 34456777665543 1222344555887777787 9999999999999999999


Q ss_pred             EEeccCCCChHHHH-HhcC-CCCHHHHHHHHHHHHHHHHHHH-HcCceecCCCCCceEEcCCC-CeEEEeecCccCCCC-
Q psy6203          84 VIEYCPGGELLDHI-VERQ-RLGEKESRAFFRQILSAVAYLH-HLGYAHRDLKPENVLLDRNQ-NLKLIDFGLCAKPEG-  158 (568)
Q Consensus        84 V~E~~~~g~L~~~i-~~~~-~l~~~~~~~i~~qi~~aL~~LH-~~~ivHrDlkp~NIll~~~~-~~kl~DFG~a~~~~~-  158 (568)
                      +++|..|+++.+.+ .... ..+...+..++.|+..++.|+| ..++.||||||+|.+++.++ .++++|||+|..... 
T Consensus        99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~  178 (601)
T KOG0590|consen   99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK  178 (601)
T ss_pred             ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhcccccc
Confidence            99999999999998 5554 6788899999999999999999 99999999999999999999 999999999987654 


Q ss_pred             -CCccccccccC-CccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHH-H-HHHHHc-C--CCCCCCCC
Q psy6203         159 -GLESQLQTSCG-SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQ-L-YDKILN-G--KYTEPPWM  231 (568)
Q Consensus       159 -~~~~~~~~~~g-t~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~-~-~~~i~~-~--~~~~~~~~  231 (568)
                       +........+| ++.|+|||...+..+..+..|+||.|+++.-+++|..||....... . ...+.. +  .......+
T Consensus       179 ~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (601)
T KOG0590|consen  179 NGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSI  258 (601)
T ss_pred             CCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccC
Confidence             33444566788 9999999999887677889999999999999999999996543221 1 111111 1  12333457


Q ss_pred             ChHHHHHHHHccccCcCCCCCHHHHhcCccccc-CCCCCCC--CCCC----CCcC---C-c-CCHHHHH--------HHH
Q psy6203         232 SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM-GPEDNPV--SFRP----DHEL---R-E-KDDDVIK--------VMA  291 (568)
Q Consensus       232 ~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~-~~~~~~~--~~~~----~~~~---~-~-~~~~~~~--------~~~  291 (568)
                      +....+++.+++..+|..|.+.+++-.+||+.. .......  ...+    ....   + . ....++.        ...
T Consensus       259 ~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~y~~~~~~~g~ga~g~~~~~~  338 (601)
T KOG0590|consen  259 SDQAHDLLHKILKENPSNRLSIEELKLDNWLSSKRNGFSKSNPCADSLTIAKSPIGFSEKYGKPGRVLGSGAYGSVRIAK  338 (601)
T ss_pred             ChhhhhcccccccCCchhccccccccccccccccccccccccccccccccccCccccccccCCccceeeecccCceEEEE
Confidence            889999999999999999999999999999986 1100000  0000    0000   0 0 0000000        000


Q ss_pred             hccCC--CHHHH-H----HHHHhcCCCh--------------hHHHHHHHhhhhccCCccCCCCcchhhhHHHHHHHHhC
Q psy6203         292 DHKQL--SPDDM-W----SQLNEWTYNY--------------DTCTYLLLLSRKKQGKQYYGSETDVWSMGVMLYALLCG  350 (568)
Q Consensus       292 ~~~~~--~~~~~-~----~~l~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~  350 (568)
                      .....  .+.+. .    ....+..|+.              ....-.++..-  +....+.+  =.|..+ +||.++..
T Consensus       339 ~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~--~~~~~~~~--mE~~~~-Dlf~~~~~  413 (601)
T KOG0590|consen  339 RRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQ--EIDGILQS--MEYCPY-DLFSLVMS  413 (601)
T ss_pred             ecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHh--hcccchhh--hhcccH-HHHHHHhc
Confidence            00000  00000 0    0000111111              11000011000  11111111  234445 88888888


Q ss_pred             CCCCChhhHHHHHHHHhhcc--------------------CcceeEEEccccCcccccCCCC---ceecccccccccccC
Q psy6203         351 FLPFDSDSIDQLYDKILSHF--------------------MPICTILISQYFPTILLPCKVG---QVINLLRSAIVLCSA  407 (568)
Q Consensus       351 ~~~~~e~~~~~~~~qil~~~--------------------~~~~~iki~dfG~~~~~~~~~~---~~~~~~~gt~~~~~p  407 (568)
                      .+.+...++..+|+|++.|+                    ...+.+||+|||.+.+......   ......+|+-.|.||
T Consensus       414 ~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~ap  493 (601)
T KOG0590|consen  414 NGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAP  493 (601)
T ss_pred             ccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCc
Confidence            78999999999999999874                    2334789999997755544332   345678999999999


Q ss_pred             CC--CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHH--HH-------HHcCCCCCCCCCCHHHHHHHHHccCCCc
Q psy6203         408 PS--SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLY--DK-------ILNGKYTEPPWMSPNSRQIVRSMLQVEP  476 (568)
Q Consensus       408 e~--~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~--~~-------i~~~~~~~~~~~s~~~~~li~~~L~~dp  476 (568)
                      |+  ...|....+||||+|+++..|++|+.||......+..  ..       +..+....-..++...+.+|.+||+.||
T Consensus       494 E~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P  573 (601)
T KOG0590|consen  494 EVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDP  573 (601)
T ss_pred             ccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCCh
Confidence            98  7788888999999999999999999999875543221  11       1112222223478889999999999999


Q ss_pred             CCCCCHHHHhcCcccccC
Q psy6203         477 GKRIKIQDLLGHNWVKMG  494 (568)
Q Consensus       477 ~~R~t~~~~l~hp~~~~~  494 (568)
                      .+|+|+++|++.+||+..
T Consensus       574 ~~R~ti~~i~~d~W~~~i  591 (601)
T KOG0590|consen  574 TKRITIEQILNDEWIRSI  591 (601)
T ss_pred             hheecHHHHhhChHhhhc
Confidence            999999999999999853


No 381
>KOG0664|consensus
Probab=100.00  E-value=2.1e-39  Score=298.79  Aligned_cols=254  Identities=27%  Similarity=0.466  Sum_probs=213.3

Q ss_pred             EEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-CchHHHHHHHHHHHhCCCCCcceeeEEEEeCC-----EEEEE
Q psy6203          11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-EDLPRVKLEINALKHISHQHICKLFQVIETSS-----HIFMV   84 (568)
Q Consensus        11 ~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~-----~~~lV   84 (568)
                      +-.+.||-|+||.||.+.+..+|+.||+|.+...... ...+++-+|+++|..++|.|++..+++.+..+     .+|+|
T Consensus        56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~  135 (449)
T KOG0664|consen   56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL  135 (449)
T ss_pred             CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence            3457899999999999999999999999988643221 23567888999999999999999999886543     46889


Q ss_pred             EeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          85 IEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      +|++ ..+|...|..-..++.+.++-+++||++||+|||+.||.||||||.|+|+++|..+||||||+++.........+
T Consensus       136 TELm-QSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hM  214 (449)
T KOG0664|consen  136 TELM-QSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNM  214 (449)
T ss_pred             HHHH-HhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhhhh
Confidence            9999 678999998889999999999999999999999999999999999999999999999999999998766555555


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHH-----------------------
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKIL-----------------------  221 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~-----------------------  221 (568)
                      ...+.|..|.|||++.|...|+.+.||||.|||+.||+..+..|...+.-+..+.|.                       
T Consensus       215 TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~L  294 (449)
T KOG0664|consen  215 THEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVL  294 (449)
T ss_pred             HHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhh
Confidence            666789999999999999889999999999999999999999998766555444332                       


Q ss_pred             cCCCCCCC-----------CCChHHHHHHHHccccCcCCCCCHHHHhcCcccccC
Q psy6203         222 NGKYTEPP-----------WMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       222 ~~~~~~~~-----------~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                      ++....|.           .-..+..+++..+|..||++|++.++.+.|++...+
T Consensus       295 R~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~~e~  349 (449)
T KOG0664|consen  295 RAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYLEEG  349 (449)
T ss_pred             ccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccccccc
Confidence            12221111           123456789999999999999999999999998643


No 382
>KOG0665|consensus
Probab=100.00  E-value=7e-38  Score=295.62  Aligned_cols=251  Identities=28%  Similarity=0.497  Sum_probs=208.0

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCc-CCchHHHHHHHHHHHhCCCCCcceeeEEEEeC------C
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATL-GEDLPRVKLEINALKHISHQHICKLFQVIETS------S   79 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~------~   79 (568)
                      ..+|.-++.+|.|.- .|..|-+..+++.||+|.+..... ....++..+|..++..++|+||++++.+|.-.      .
T Consensus        16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~   94 (369)
T KOG0665|consen   16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ   94 (369)
T ss_pred             eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence            458888999999999 888899999999999998765522 23567888999999999999999999998533      3


Q ss_pred             EEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCC
Q psy6203          80 HIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGG  159 (568)
Q Consensus        80 ~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~  159 (568)
                      .+|+|||++ ..+|.+.+.  -.++-..+..|+.|++.|++|||+.||+||||||+||++..+..+||.|||+|+.....
T Consensus        95 e~y~v~e~m-~~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~  171 (369)
T KOG0665|consen   95 EVYLVMELM-DANLCQVIL--MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD  171 (369)
T ss_pred             hHHHHHHhh-hhHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccCcc
Confidence            689999999 568888876  45778889999999999999999999999999999999999999999999999876543


Q ss_pred             CccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcC----------------
Q psy6203         160 LESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG----------------  223 (568)
Q Consensus       160 ~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~----------------  223 (568)
                        -..+..+.|..|.|||++.+.. +...+||||+||++.||++|+..|.+.+.-+.+.++...                
T Consensus       172 --~~mtpyVvtRyyrapevil~~~-~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~  248 (369)
T KOG0665|consen  172 --FMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTV  248 (369)
T ss_pred             --cccCchhheeeccCchheeccC-CcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHH
Confidence              3456678899999999999888 689999999999999999999999876543333222110                


Q ss_pred             --------C---CC----CC-----------CCCChHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         224 --------K---YT----EP-----------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       224 --------~---~~----~~-----------~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                              +   ..    +|           +.-+..+++++.+||..||++|.|++++|.|||++.
T Consensus       249 r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~~v  315 (369)
T KOG0665|consen  249 RNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYIKV  315 (369)
T ss_pred             HHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCeeee
Confidence                    0   00    01           112346789999999999999999999999999983


No 383
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=100.00  E-value=4.1e-37  Score=332.81  Aligned_cols=252  Identities=22%  Similarity=0.323  Sum_probs=179.8

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCC----CcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEE------EE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLT----GEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQV------IE   76 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~------~~   76 (568)
                      .++|.+.+.||+|+||.||+|.+..+    +..||+|.+.....   .+....|  .++...+.++..+...      ..
T Consensus       131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~  205 (566)
T PLN03225        131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---VEIWMNE--RVRRACPNSCADFVYGFLEPVSSK  205 (566)
T ss_pred             cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---hHHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence            46899999999999999999999988    89999998764321   1111111  1222223333332222      23


Q ss_pred             eCCEEEEEEeccCCCChHHHHHhcCC--------------------CCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCc
Q psy6203          77 TSSHIFMVIEYCPGGELLDHIVERQR--------------------LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPEN  136 (568)
Q Consensus        77 ~~~~~~lV~E~~~~g~L~~~i~~~~~--------------------l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N  136 (568)
                      .....++||||+.+++|.+++.....                    ..+..+..++.||+.||.|||++||+||||||+|
T Consensus       206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~N  285 (566)
T PLN03225        206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQN  285 (566)
T ss_pred             cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHH
Confidence            55678999999999999999865321                    1234467899999999999999999999999999


Q ss_pred             eEEcC-CCCeEEEeecCccCCCCCCccccccccCCccccccccccCcc---------------------cCCcccceech
Q psy6203         137 VLLDR-NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQ---------------------YYGSETDVWSM  194 (568)
Q Consensus       137 Ill~~-~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~---------------------~~~~~~DiwSl  194 (568)
                      ||++. ++.+||+|||+|+.............++|+.|+|||.+....                     .++.++||||+
T Consensus       286 ILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSl  365 (566)
T PLN03225        286 IIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSA  365 (566)
T ss_pred             EEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHH
Confidence            99985 579999999999865444334445678999999999764221                     12345699999


Q ss_pred             hhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC---------------------CCCCCChHHHHHHHHccccCcCCCCCH
Q psy6203         195 GVMLYALLCGFLPFDSDSIDQLYDKILNGKYT---------------------EPPWMSPNSRQIVRSMLQVEPGKRIKI  253 (568)
Q Consensus       195 G~il~~lltG~~pf~~~~~~~~~~~i~~~~~~---------------------~~~~~~~~~~~li~~~L~~dP~~Rps~  253 (568)
                      ||++|+|+++..|+... ...+...+......                     ..........+||.+||++||.+|||+
T Consensus       366 GviL~el~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta  444 (566)
T PLN03225        366 GLIFLQMAFPNLRSDSN-LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISA  444 (566)
T ss_pred             HHHHHHHHhCcCCCchH-HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCH
Confidence            99999999987775432 11222222111110                     001123345689999999999999999


Q ss_pred             HHHhcCccccc
Q psy6203         254 QDLLGHNWVKM  264 (568)
Q Consensus       254 ~ell~hp~~~~  264 (568)
                      .|+|+||||..
T Consensus       445 ~e~L~Hpff~~  455 (566)
T PLN03225        445 KAALAHPYFDR  455 (566)
T ss_pred             HHHhCCcCcCC
Confidence            99999999984


No 384
>KOG0196|consensus
Probab=100.00  E-value=9e-38  Score=323.94  Aligned_cols=249  Identities=26%  Similarity=0.411  Sum_probs=222.3

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCc---EEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGE---KVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~---~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      .-.|.++||.|.||.|+.|+-+..|+   .||||.++....+.....|..|..||-+++||||++|.++......+.||+
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT  709 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT  709 (996)
T ss_pred             heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence            45789999999999999999887764   699999987766566677999999999999999999999999999999999


Q ss_pred             eccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          86 EYCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        86 E~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |||++|+|..+++++ +.|+..+...+++.|+.|++||-++|+|||||...|||++.+-.+|++|||+++...++.....
T Consensus       710 EyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~y  789 (996)
T KOG0196|consen  710 EYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAY  789 (996)
T ss_pred             hhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCccc
Confidence            999999999999875 6799999999999999999999999999999999999999999999999999997765543334


Q ss_pred             ccccC--CccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCChHHHHHHH
Q psy6203         165 QTSCG--SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQIVR  240 (568)
Q Consensus       165 ~~~~g--t~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~  240 (568)
                      .+..|  ...|.|||.+..++ ++.++||||+|+++||.++ |..||...+.+++++.|..|- ++.|...+..+.+|+.
T Consensus       790 tt~GGKIPiRWTAPEAIa~RK-FTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmDCP~aL~qLMl  868 (996)
T KOG0196|consen  790 TTLGGKIPIRWTAPEAIAYRK-FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMDCPAALYQLML  868 (996)
T ss_pred             cccCCccceeecChhHhhhcc-cCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCCCcHHHHHHHH
Confidence            44444  35899999998877 6999999999999999876 999999999999999998884 4566678999999999


Q ss_pred             HccccCcCCCCCHHHHhc
Q psy6203         241 SMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       241 ~~L~~dP~~Rps~~ell~  258 (568)
                      .||++|-.+||++.||+.
T Consensus       869 dCWqkdR~~RP~F~qiV~  886 (996)
T KOG0196|consen  869 DCWQKDRNRRPKFAQIVS  886 (996)
T ss_pred             HHHHHHhhcCCCHHHHHH
Confidence            999999999999999876


No 385
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=100.00  E-value=4.3e-36  Score=291.73  Aligned_cols=240  Identities=45%  Similarity=0.776  Sum_probs=210.5

Q ss_pred             CCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCCChHHHHHh
Q psy6203          20 GFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLDHIVE   99 (568)
Q Consensus        20 ~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g~L~~~i~~   99 (568)
                      +||.||+|.+..+|+.+|+|++.........+.+.+|+..+++++|+||+++++.+......+++|||+++++|.+++..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~   80 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK   80 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence            58999999999889999999997655433257888999999999999999999999999999999999999999999987


Q ss_pred             cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCCccccccccc
Q psy6203         100 RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVI  179 (568)
Q Consensus       100 ~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l  179 (568)
                      ...++...+..++.+++.+|.+||+.+++|+||+|+||+++.++.++|+|||.+.......  ......++..|+|||.+
T Consensus        81 ~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~~~~~~~~~~pE~~  158 (244)
T smart00220       81 RGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--LLTTFVGTPEYMAPEVL  158 (244)
T ss_pred             ccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc--ccccccCCcCCCCHHHH
Confidence            7669999999999999999999999999999999999999999999999999987654321  33445688899999998


Q ss_pred             cCcccCCcccceechhhHHHHHHhCCCCCCC-CCHHHHHHHHHcCCCCCCCC---CChHHHHHHHHccccCcCCCCCHHH
Q psy6203         180 KGKQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKYTEPPW---MSPNSRQIVRSMLQVEPGKRIKIQD  255 (568)
Q Consensus       180 ~~~~~~~~~~DiwSlG~il~~lltG~~pf~~-~~~~~~~~~i~~~~~~~~~~---~~~~~~~li~~~L~~dP~~Rps~~e  255 (568)
                      .+.. ++.++||||+|+++++|++|..||.. .......+.+..+.......   ++.++.+++.+||..+|++||++.+
T Consensus       159 ~~~~-~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~  237 (244)
T smart00220      159 LGKG-YGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEE  237 (244)
T ss_pred             ccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHH
Confidence            7655 57899999999999999999999987 66666777666665554433   7889999999999999999999999


Q ss_pred             HhcCccc
Q psy6203         256 LLGHNWV  262 (568)
Q Consensus       256 ll~hp~~  262 (568)
                      +++||||
T Consensus       238 ~~~~~~~  244 (244)
T smart00220      238 ALQHPFF  244 (244)
T ss_pred             HhhCCCC
Confidence            9999997


No 386
>KOG4257|consensus
Probab=100.00  E-value=2.9e-37  Score=312.40  Aligned_cols=245  Identities=28%  Similarity=0.450  Sum_probs=210.7

Q ss_pred             EEEeeecccCCeEEEEEEEcC--CC--cEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203          11 ILERTVGSGGFAKVKLATHVL--TG--EKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus        11 ~i~~~lG~G~~g~V~~~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      .+.+.||.|-||.||.|.-..  .|  -.||||..+.....++.+.|..|..+|+.++|||||++++++.+. ..+||||
T Consensus       392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P~WivmE  470 (974)
T KOG4257|consen  392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-PMWIVME  470 (974)
T ss_pred             cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeecc-ceeEEEe
Confidence            445789999999999997532  23  358999988766666788999999999999999999999999654 5799999


Q ss_pred             ccCCCChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccc
Q psy6203          87 YCPGGELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQ  165 (568)
Q Consensus        87 ~~~~g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~  165 (568)
                      +++-|.|..++..+ ..++......++.||+.||.|||+.+.|||||-..|||+.+...+||+|||+++...........
T Consensus       471 L~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS  550 (974)
T KOG4257|consen  471 LAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS  550 (974)
T ss_pred             cccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchhhcc
Confidence            99999999999865 56888899999999999999999999999999999999999999999999999987765433333


Q ss_pred             cccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCChHHHHHHHHcc
Q psy6203         166 TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQIVRSML  243 (568)
Q Consensus       166 ~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~~L  243 (568)
                      ...-..-|||||.+.-.. ++.++|||-|||++||++. |..||.+-...++.-.+.+|. ++.|+..++.+-.|+.+||
T Consensus       551 ~~kLPIKWmaPESINfRr-FTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCPp~LYslmskcW  629 (974)
T KOG4257|consen  551 RGKLPIKWMAPESINFRR-FTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCPPALYSLMSKCW  629 (974)
T ss_pred             ccccceeecCccccchhc-ccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCCChHHHHHHHHHh
Confidence            333356899999997666 6999999999999999987 999999887777777777764 5778899999999999999


Q ss_pred             ccCcCCCCCHHHHh
Q psy6203         244 QVEPGKRIKIQDLL  257 (568)
Q Consensus       244 ~~dP~~Rps~~ell  257 (568)
                      .+||.+||++.++.
T Consensus       630 ayeP~kRPrftei~  643 (974)
T KOG4257|consen  630 AYEPSKRPRFTEIK  643 (974)
T ss_pred             ccCcccCCcHHHHH
Confidence            99999999987754


No 387
>KOG1290|consensus
Probab=100.00  E-value=1e-36  Score=301.60  Aligned_cols=132  Identities=33%  Similarity=0.467  Sum_probs=114.7

Q ss_pred             cc-cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCC-----C---CCcceeeEEEE
Q psy6203           6 LR-NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS-----H---QHICKLFQVIE   76 (568)
Q Consensus         6 ~~-~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~-----h---pnIv~l~~~~~   76 (568)
                      |. ++|.+.++||.|.|++||+|.+..+.+.||+|+.+....  -.+....||++|++++     |   .+||+|++.|.
T Consensus        75 F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqh--YtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fk  152 (590)
T KOG1290|consen   75 FNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQH--YTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFK  152 (590)
T ss_pred             ccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhH--HHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccce
Confidence            44 899999999999999999999999999999999985432  2345677999999883     3   47999999996


Q ss_pred             e----CCEEEEEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHc-CceecCCCCCceEEc
Q psy6203          77 T----SSHIFMVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHL-GYAHRDLKPENVLLD  140 (568)
Q Consensus        77 ~----~~~~~lV~E~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~  140 (568)
                      .    +.++|+|+|++ |.+|+.+|...  +.++...++.|++||+.||.|||.. ||||-||||+|||+.
T Consensus       153 hsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~  222 (590)
T KOG1290|consen  153 HSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC  222 (590)
T ss_pred             ecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence            4    45899999999 88999999764  5699999999999999999999965 999999999999973


No 388
>KOG0670|consensus
Probab=100.00  E-value=2.2e-37  Score=307.70  Aligned_cols=252  Identities=29%  Similarity=0.481  Sum_probs=209.5

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCC------CCcceeeEEEEeC
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH------QHICKLFQVIETS   78 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~h------pnIv~l~~~~~~~   78 (568)
                      -+.++|.+....|+|-||+|..|.+...|..||||++.....  -.+.=..|+++|++|+.      -|+++++..|...
T Consensus       429 ~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~--M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hk  506 (752)
T KOG0670|consen  429 LLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV--MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHK  506 (752)
T ss_pred             hhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH--HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhc
Confidence            356899999999999999999999999999999999986532  12344579999999962      3899999999999


Q ss_pred             CEEEEEEeccCCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCC-CeEEEeecCcc
Q psy6203          79 SHIFMVIEYCPGGELLDHIVERQ---RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQ-NLKLIDFGLCA  154 (568)
Q Consensus        79 ~~~~lV~E~~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-~~kl~DFG~a~  154 (568)
                      +++|||+|-+ .-+|.+.+.+-+   .+....++.++.|+..||..|-..||+|.||||+|||+++.. .+||||||.|.
T Consensus       507 nHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~  585 (752)
T KOG0670|consen  507 NHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSAS  585 (752)
T ss_pred             ceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcccc
Confidence            9999999998 568999998744   477889999999999999999999999999999999998764 58999999988


Q ss_pred             CCCCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCCC-----
Q psy6203         155 KPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN--GKYTE-----  227 (568)
Q Consensus       155 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~--~~~~~-----  227 (568)
                      ....+   .......+..|.|||++.|-+ |+...|+||+||+||||.||+..|++.+..+++...+.  |.++-     
T Consensus       586 ~~~en---eitPYLVSRFYRaPEIiLG~~-yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRK  661 (752)
T KOG0670|consen  586 FASEN---EITPYLVSRFYRAPEIILGLP-YDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRK  661 (752)
T ss_pred             ccccc---cccHHHHHHhccCcceeecCc-ccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhh
Confidence            76543   334445678899999999988 58999999999999999999999999887766543322  11110     


Q ss_pred             -----------------------------------C-----------CCC-------ChHHHHHHHHccccCcCCCCCHH
Q psy6203         228 -----------------------------------P-----------PWM-------SPNSRQIVRSMLQVEPGKRIKIQ  254 (568)
Q Consensus       228 -----------------------------------~-----------~~~-------~~~~~~li~~~L~~dP~~Rps~~  254 (568)
                                                         |           +.+       -..+++|+.+||..||++|.|+.
T Consensus       662 gqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~n  741 (752)
T KOG0670|consen  662 GQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVN  741 (752)
T ss_pred             cchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHH
Confidence                                               0           001       13578999999999999999999


Q ss_pred             HHhcCcccc
Q psy6203         255 DLLGHNWVK  263 (568)
Q Consensus       255 ell~hp~~~  263 (568)
                      |+|.||||.
T Consensus       742 qAL~HpFi~  750 (752)
T KOG0670|consen  742 QALKHPFIT  750 (752)
T ss_pred             HHhcCCccc
Confidence            999999997


No 389
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=100.00  E-value=1.1e-35  Score=313.87  Aligned_cols=257  Identities=19%  Similarity=0.301  Sum_probs=188.4

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEc----------------CCCcEEEEEEeecCCcCC-------------chHHHHHHH
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHV----------------LTGEKVAIKIMKKATLGE-------------DLPRVKLEI   57 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~----------------~~~~~vavK~~~~~~~~~-------------~~~~~~~Ei   57 (568)
                      .++|.+.++||+|+||+||+|...                ..++.||||.+.......             ..+....|+
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            568999999999999999999752                234679999986432110             112234577


Q ss_pred             HHHHhCCCCCc-----ceeeEEEEe--------CCEEEEEEeccCCCChHHHHHhc------------------------
Q psy6203          58 NALKHISHQHI-----CKLFQVIET--------SSHIFMVIEYCPGGELLDHIVER------------------------  100 (568)
Q Consensus        58 ~~l~~l~hpnI-----v~l~~~~~~--------~~~~~lV~E~~~~g~L~~~i~~~------------------------  100 (568)
                      .++.+++|.++     +++++++..        .+..++||||+++++|.+++...                        
T Consensus       224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~  303 (507)
T PLN03224        224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ  303 (507)
T ss_pred             HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence            77777876554     666666642        35689999999999999988642                        


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccCCcccccccccc
Q psy6203         101 QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIK  180 (568)
Q Consensus       101 ~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~  180 (568)
                      ..+++..++.++.|++.||.|||+.+|+||||||+|||++.++.+||+|||++...............+|+.|+|||.+.
T Consensus       304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~  383 (507)
T PLN03224        304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELV  383 (507)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhc
Confidence            12345678899999999999999999999999999999999999999999998754432222222234589999999985


Q ss_pred             Cccc-------------------C--CcccceechhhHHHHHHhCCC-CCCCCC-----------HHHHHHHHHcCCCCC
Q psy6203         181 GKQY-------------------Y--GSETDVWSMGVMLYALLCGFL-PFDSDS-----------IDQLYDKILNGKYTE  227 (568)
Q Consensus       181 ~~~~-------------------~--~~~~DiwSlG~il~~lltG~~-pf~~~~-----------~~~~~~~i~~~~~~~  227 (568)
                      ....                   +  ..+.||||+||++|+|++|.. ||....           ....+..+....+.+
T Consensus       384 ~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~  463 (507)
T PLN03224        384 MPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDF  463 (507)
T ss_pred             CCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCc
Confidence            4221                   1  124799999999999999875 664321           111122222333333


Q ss_pred             --CCCCChHHHHHHHHccccCc---CCCCCHHHHhcCcccc
Q psy6203         228 --PPWMSPNSRQIVRSMLQVEP---GKRIKIQDLLGHNWVK  263 (568)
Q Consensus       228 --~~~~~~~~~~li~~~L~~dP---~~Rps~~ell~hp~~~  263 (568)
                        ....++.+++|+.+||..+|   .+|+|++|+|+||||.
T Consensus       464 ~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~  504 (507)
T PLN03224        464 SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFL  504 (507)
T ss_pred             ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcC
Confidence              34578999999999999866   6899999999999996


No 390
>KOG1094|consensus
Probab=100.00  E-value=9.1e-37  Score=307.22  Aligned_cols=250  Identities=24%  Similarity=0.360  Sum_probs=210.2

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      ++.-.+.++||+|-||.|.+|.-. .+.+||+|.++..........|..|+++|.+|+|||||+++++|..++.+++|||
T Consensus       537 Rs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E  615 (807)
T KOG1094|consen  537 RSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE  615 (807)
T ss_pred             hhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence            356678999999999999999853 4689999999876655556789999999999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          87 YCPGGELLDHIVERQR--LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        87 ~~~~g~L~~~i~~~~~--l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      |++.|+|.+++.+...  ........|+.||++|++||.+.++|||||.+.|+|++.++++||+|||+++..-.+.....
T Consensus       616 YmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~v  695 (807)
T KOG1094|consen  616 YMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRV  695 (807)
T ss_pred             HHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceee
Confidence            9999999999987643  34455667999999999999999999999999999999999999999999985444332222


Q ss_pred             c-cccCCccccccccccCcccCCcccceechhhHHHHHHh--CCCCCCCCCHHHHHHHHHcC--------CCCCCCCCCh
Q psy6203         165 Q-TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC--GFLPFDSDSIDQLYDKILNG--------KYTEPPWMSP  233 (568)
Q Consensus       165 ~-~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt--G~~pf~~~~~~~~~~~i~~~--------~~~~~~~~~~  233 (568)
                      + ..+-...|||||.+..++ ++.++|+|++|+++||+++  ...||...+.+++.++...-        .+..|+..+.
T Consensus       696 qgr~vlpiRwmawEsillgk-FttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~  774 (807)
T KOG1094|consen  696 QGRAVLPIRWMAWESILLGK-FTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQ  774 (807)
T ss_pred             ecceeeeeeehhHHHHHhcc-ccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcH
Confidence            2 234567999999998776 6999999999999999865  78899888877776654321        1234566788


Q ss_pred             HHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         234 NSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       234 ~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      .+.+++.+|+..|..+|||.+++..
T Consensus       775 ~lyelml~Cw~~es~~RPsFe~lh~  799 (807)
T KOG1094|consen  775 GLYELMLRCWRRESEQRPSFEQLHL  799 (807)
T ss_pred             HHHHHHHHHhchhhhcCCCHHHHHH
Confidence            9999999999999999999999854


No 391
>KOG0199|consensus
Probab=100.00  E-value=1.8e-36  Score=310.34  Aligned_cols=254  Identities=24%  Similarity=0.378  Sum_probs=217.8

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCC---cEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEE
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTG---EKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~---~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV   84 (568)
                      ++..+.++||+|+||.|+.|.+...+   -.||||++...........|.+|+.+|.+|+|||++++|++..+ ..+.+|
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV  188 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMV  188 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHH
Confidence            34566789999999999999987543   35899999877666567789999999999999999999999987 667899


Q ss_pred             EeccCCCChHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcc
Q psy6203          85 IEYCPGGELLDHIVE--RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLES  162 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~  162 (568)
                      ||+++.|+|.+.+.+  +..|.......++.||+.|+.||.+++.|||||-..|+|+-....|||+|||+.+....+...
T Consensus       189 ~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~  268 (1039)
T KOG0199|consen  189 FELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM  268 (1039)
T ss_pred             hhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcc
Confidence            999999999999987  356888899999999999999999999999999999999999999999999999876654322


Q ss_pred             ccc--cccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCChHHHHH
Q psy6203         163 QLQ--TSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQI  238 (568)
Q Consensus       163 ~~~--~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~l  238 (568)
                      ...  ..--...|+|||.+.... ++.++|+|++||++|||+| |..||.+.+..++.++|..+. ++-|+..+.++.++
T Consensus       269 Yvm~p~rkvPfAWCaPEsLrh~k-FShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRPk~csedIY~i  347 (1039)
T KOG0199|consen  269 YVMAPQRKVPFAWCAPESLRHRK-FSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRPKYCSEDIYQI  347 (1039)
T ss_pred             eEecCCCcCcccccCHhHhcccc-ccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCCCCChHHHHHH
Confidence            211  112345799999999877 6999999999999999998 899999999999999988664 45677789999999


Q ss_pred             HHHccccCcCCCCCHHHHhcCcccc
Q psy6203         239 VRSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       239 i~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                      ++.||..+|.+|||+..|.+.-+..
T Consensus       348 mk~cWah~paDRptFsair~~~~l~  372 (1039)
T KOG0199|consen  348 MKNCWAHNPADRPTFSAIREDLVLA  372 (1039)
T ss_pred             HHHhccCCccccccHHHHHHhHHHH
Confidence            9999999999999999987554443


No 392
>KOG4278|consensus
Probab=100.00  E-value=8.1e-36  Score=301.48  Aligned_cols=246  Identities=24%  Similarity=0.407  Sum_probs=215.7

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEecc
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYC   88 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~   88 (568)
                      +.....+||-|.||.||.|.+++..-.||||.++...+  ....|..|..+|+.++|||+|+++++|..+..+|||+|||
T Consensus       268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM--eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM  345 (1157)
T KOG4278|consen  268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFM  345 (1157)
T ss_pred             heeeeeccCCCcccceeeeeeeccceeeehhhhhhcch--hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecc
Confidence            44667899999999999999999999999999986654  4668999999999999999999999999999999999999


Q ss_pred             CCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccc
Q psy6203          89 PGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQT  166 (568)
Q Consensus        89 ~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~  166 (568)
                      ..|+|++++++.  ..++.-....++.||.+|+.||..+++|||||-..|+|+.++..+|++|||+++....+.....-.
T Consensus       346 ~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAG  425 (1157)
T KOG4278|consen  346 CYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAG  425 (1157)
T ss_pred             cCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccC
Confidence            999999999864  346667778899999999999999999999999999999999999999999999876543222111


Q ss_pred             ccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCCCCChHHHHHHHHccc
Q psy6203         167 SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-TEPPWMSPNSRQIVRSMLQ  244 (568)
Q Consensus       167 ~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~li~~~L~  244 (568)
                      .--...|.|||-+.-+. ++.++|||+|||+|||+.| |..||.+-+..+++..+.++.. ..|..+++.+.+|++.||+
T Consensus       426 AKFPIKWTAPEsLAyNt-FSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGCPpkVYeLMraCW~  504 (1157)
T KOG4278|consen  426 AKFPIKWTAPESLAYNT-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGCPPKVYELMRACWN  504 (1157)
T ss_pred             ccCcccccCcccccccc-cccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCCCHHHHHHHHHHhc
Confidence            22356799999998766 5889999999999999998 9999999999999998887754 4577799999999999999


Q ss_pred             cCcCCCCCHHHHh
Q psy6203         245 VEPGKRIKIQDLL  257 (568)
Q Consensus       245 ~dP~~Rps~~ell  257 (568)
                      ++|.+||++.|+-
T Consensus       505 WsPsDRPsFaeiH  517 (1157)
T KOG4278|consen  505 WSPSDRPSFAEIH  517 (1157)
T ss_pred             CCcccCccHHHHH
Confidence            9999999998873


No 393
>KOG1027|consensus
Probab=100.00  E-value=3.4e-36  Score=315.27  Aligned_cols=242  Identities=27%  Similarity=0.442  Sum_probs=196.6

Q ss_pred             EeeecccCCeE-EEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCC-CCCcceeeEEEEeCCEEEEEEeccCC
Q psy6203          13 ERTVGSGGFAK-VKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS-HQHICKLFQVIETSSHIFMVIEYCPG   90 (568)
Q Consensus        13 ~~~lG~G~~g~-V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~~~lV~E~~~~   90 (568)
                      .+.+|.|+.|+ ||+|.  ..|+.||||.+-..    ......+|+..|+.-+ |||||++|+.-.+....||..|.| .
T Consensus       514 ~eilG~Gs~Gt~Vf~G~--ye~R~VAVKrll~e----~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC-~  586 (903)
T KOG1027|consen  514 KEILGYGSNGTVVFRGV--YEGREVAVKRLLEE----FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC-A  586 (903)
T ss_pred             HHHcccCCCCcEEEEEe--eCCceehHHHHhhH----hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-h
Confidence            46789999985 78888  47889999987543    3456789999999874 999999999999999999999999 5


Q ss_pred             CChHHHHHhcCC----CCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcC---CC--CeEEEeecCccCCCCCCc
Q psy6203          91 GELLDHIVERQR----LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR---NQ--NLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        91 g~L~~~i~~~~~----l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~---~~--~~kl~DFG~a~~~~~~~~  161 (568)
                      .+|.+++.....    ......+.++.|+++||++||+.+||||||||+||||+.   ++  .++|+|||+|++...+..
T Consensus       587 ~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~s  666 (903)
T KOG1027|consen  587 CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKS  666 (903)
T ss_pred             hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcc
Confidence            699999976411    112455788999999999999999999999999999976   34  689999999998766543


Q ss_pred             c--ccccccCCccccccccccCcccCCcccceechhhHHHHHHhC-CCCCCCCCHHHHHHHHHcCCCCCCC---CCChHH
Q psy6203         162 S--QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCG-FLPFDSDSIDQLYDKILNGKYTEPP---WMSPNS  235 (568)
Q Consensus       162 ~--~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG-~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~  235 (568)
                      +  ...+..||-+|+|||++..... +.++|||||||++|+.++| ..||...-.  -..+|..+.+....   ....++
T Consensus       667 S~~r~s~~sGt~GW~APE~L~~~~~-~~avDiFslGCvfyYvltgG~HpFGd~~~--R~~NIl~~~~~L~~L~~~~d~eA  743 (903)
T KOG1027|consen  667 SFSRLSGGSGTSGWQAPEQLREDRK-TQAVDIFSLGCVFYYVLTGGSHPFGDSLE--RQANILTGNYTLVHLEPLPDCEA  743 (903)
T ss_pred             hhhcccCCCCcccccCHHHHhcccc-CcccchhhcCceEEEEecCCccCCCchHH--hhhhhhcCccceeeeccCchHHH
Confidence            3  2345679999999999987764 6789999999999999985 899965432  23467777664321   122289


Q ss_pred             HHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         236 RQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       236 ~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      .+||.+||.+||..||+|.++|.||+|..
T Consensus       744 ~dLI~~ml~~dP~~RPsa~~VL~HPlFW~  772 (903)
T KOG1027|consen  744 KDLISRMLNPDPQLRPSATDVLNHPLFWD  772 (903)
T ss_pred             HHHHHHhcCCCcccCCCHHHHhCCCccCC
Confidence            99999999999999999999999999973


No 394
>KOG1152|consensus
Probab=100.00  E-value=9.1e-36  Score=299.80  Aligned_cols=199  Identities=34%  Similarity=0.618  Sum_probs=180.6

Q ss_pred             cCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC-------CchHHHHHHHHHHHhCC---CCCcceeeEEEEe
Q psy6203           8 NQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG-------EDLPRVKLEINALKHIS---HQHICKLFQVIET   77 (568)
Q Consensus         8 ~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-------~~~~~~~~Ei~~l~~l~---hpnIv~l~~~~~~   77 (568)
                      ..|..++.+|+|+||.|++|.++.....|+||.+.+...-       ...-.+-.||+||..|+   |+||++++++|++
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd  640 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED  640 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence            4599999999999999999999999999999998876542       12334667999999997   9999999999999


Q ss_pred             CCEEEEEEecc-CCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCC
Q psy6203          78 SSHIFMVIEYC-PGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKP  156 (568)
Q Consensus        78 ~~~~~lV~E~~-~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~  156 (568)
                      ++++||+||-- +|-+|+++|.-+..++|.+++.|++|++.|+++||++||||||||-+|+.++.+|.+||+|||.|...
T Consensus       641 dd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~  720 (772)
T KOG1152|consen  641 DDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYT  720 (772)
T ss_pred             CCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhh
Confidence            99999999987 56799999999999999999999999999999999999999999999999999999999999998776


Q ss_pred             CCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCC
Q psy6203         157 EGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFD  209 (568)
Q Consensus       157 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~  209 (568)
                      ..+   ....++||..|+|||++.|.+|.+..-|||+||++||.++....||.
T Consensus       721 ksg---pfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  721 KSG---PFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             cCC---CcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence            543   45677899999999999999998999999999999999999888874


No 395
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00  E-value=3.3e-34  Score=333.74  Aligned_cols=238  Identities=19%  Similarity=0.247  Sum_probs=188.2

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      ...|...+.||+|+||.||+|.+..+|..||+|.+.....     ....|+..+++++|||||++++++.+.+..|+|||
T Consensus       689 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~E  763 (968)
T PLN00113        689 LSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHE  763 (968)
T ss_pred             HhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEe
Confidence            3456677899999999999999999999999998864321     12346888999999999999999999999999999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccc
Q psy6203          87 YCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLH---HLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQ  163 (568)
Q Consensus        87 ~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~  163 (568)
                      |+++|+|.+++.   .+++..+..++.||+.||+|||   +.+|+||||||+||+++.++..++. ||.......     
T Consensus       764 y~~~g~L~~~l~---~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~-----  834 (968)
T PLN00113        764 YIEGKNLSEVLR---NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT-----  834 (968)
T ss_pred             CCCCCcHHHHHh---cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc-----
Confidence            999999999985   4889999999999999999999   6799999999999999998888775 665433221     


Q ss_pred             cccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCC-----HHHHHHHHHc---------CCC----
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDS-----IDQLYDKILN---------GKY----  225 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~-----~~~~~~~i~~---------~~~----  225 (568)
                      .....||+.|+|||++.+.. ++.++|||||||++|||+||+.||....     ..+.......         ...    
T Consensus       835 ~~~~~~t~~y~aPE~~~~~~-~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  913 (968)
T PLN00113        835 DTKCFISSAYVAPETRETKD-ITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDV  913 (968)
T ss_pred             CCCccccccccCcccccCCC-CCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCC
Confidence            12336889999999998766 6899999999999999999999985321     1111111110         000    


Q ss_pred             CCCCCCChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         226 TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       226 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      ..+.....++.+++.+|++.||++|||+.|+++.
T Consensus       914 ~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        914 SVNQNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence            0000112346789999999999999999999874


No 396
>KOG0588|consensus
Probab=100.00  E-value=6.7e-34  Score=291.26  Aligned_cols=219  Identities=25%  Similarity=0.388  Sum_probs=188.7

Q ss_pred             cCCccCCCCcch-----hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc--------------------CcceeEEEcc
Q psy6203         326 QGKQYYGSETDV-----WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF--------------------MPICTILISQ  380 (568)
Q Consensus       326 ~~~~~~~~~~~~-----~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~--------------------~~~~~iki~d  380 (568)
                      +....|.++.+.     |..||+||+++...|+|+|.+++.+|+||+.|+                    +...||||+|
T Consensus        76 ~LydVwe~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIAD  155 (786)
T KOG0588|consen   76 RLYDVWENKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIAD  155 (786)
T ss_pred             eeeeeeccCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeec
Confidence            445668888887     455999999999999999999999999999874                    2234799999


Q ss_pred             ccCcccccCCCCceecccccccccccCCC--CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC
Q psy6203         381 YFPTILLPCKVGQVINLLRSAIVLCSAPS--SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP  458 (568)
Q Consensus       381 fG~~~~~~~~~~~~~~~~~gt~~~~~pe~--~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~  458 (568)
                      ||.|-+  ..+|..+.+.||+|.|.+||+  +..|.|.++||||+|||||.||+|+.||+++|...++.++..|.|..|.
T Consensus       156 FGMAsL--e~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs  233 (786)
T KOG0588|consen  156 FGMASL--EVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPS  233 (786)
T ss_pred             cceeec--ccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCC
Confidence            996543  456778899999999999998  8899999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHccCCCcCCCCCHHHHhcCcccccCCCCC-----------------CCCCCChHHHHHHHhccC-CCHH
Q psy6203         459 WMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDN-----------------PLREKDDDVIKVMADHKQ-LSPD  520 (568)
Q Consensus       459 ~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~-~~~~  520 (568)
                      .+|++|++||.+||..||.+|+|.+||++|||+.......                 .....++.+++.|.--+. -+++
T Consensus       234 ~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~~~~~~~~~~~~~~i~s~ps~~~IDp~Il~~l~iLwc~~d~~  313 (786)
T KOG0588|consen  234 NISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSLPSSKSLRPPVSVPILSIPSIQEIDPLILQHLCILWCGRDPE  313 (786)
T ss_pred             cCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCCChhhhcCCCcccceeecCCcccCCHHHHhhhhheeecCChH
Confidence            9999999999999999999999999999999997543211                 122567788888865444 4788


Q ss_pred             HHHHHHHhcCCChHHHHHHHHHhchh
Q psy6203         521 DMWSQLNEWTYNYDTCTYLLLLSRKK  546 (568)
Q Consensus       521 ~~~~~l~~~~~~~~~~~~~~l~~~~~  546 (568)
                      .+.+.|.....|..+..|+||.+++.
T Consensus       314 kl~~kLls~~~n~EK~~Y~LLl~~k~  339 (786)
T KOG0588|consen  314 KLVEKLLSPDDNDEKTLYFLLLRRKR  339 (786)
T ss_pred             HHHHHHcCCCcchhHHHHHHHHHhhc
Confidence            89999999999999999999987664


No 397
>KOG0200|consensus
Probab=100.00  E-value=3.6e-33  Score=304.99  Aligned_cols=249  Identities=25%  Similarity=0.469  Sum_probs=212.1

Q ss_pred             CeEEEeeecccCCeEEEEEEEcC-------CCcEEEEEEeecCCcCCchHHHHHHHHHHHhCC-CCCcceeeEEEEeCCE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVL-------TGEKVAIKIMKKATLGEDLPRVKLEINALKHIS-HQHICKLFQVIETSSH   80 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~-------~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~   80 (568)
                      +..+.+.||+|.||.|++|.-..       ....||||.++......+.+.+..|+++|+.+. ||||+.+++.+...+.
T Consensus       297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~  376 (609)
T KOG0200|consen  297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGP  376 (609)
T ss_pred             hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCc
Confidence            34667799999999999997431       145799999987766666778999999999995 9999999999999999


Q ss_pred             EEEEEeccCCCChHHHHHhcC----------------CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCC
Q psy6203          81 IFMVIEYCPGGELLDHIVERQ----------------RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQN  144 (568)
Q Consensus        81 ~~lV~E~~~~g~L~~~i~~~~----------------~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~  144 (568)
                      +++|+|||..|+|.++++.++                .++..+...++.||+.|++||++.++|||||-..|||+..+..
T Consensus       377 ~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~  456 (609)
T KOG0200|consen  377 LYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKV  456 (609)
T ss_pred             eEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCE
Confidence            999999999999999998765                3888899999999999999999999999999999999999999


Q ss_pred             eEEEeecCccCCCCCCccccccccC--CccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCC-HHHHHHHH
Q psy6203         145 LKLIDFGLCAKPEGGLESQLQTSCG--SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDS-IDQLYDKI  220 (568)
Q Consensus       145 ~kl~DFG~a~~~~~~~~~~~~~~~g--t~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~-~~~~~~~i  220 (568)
                      +||+|||+|+..............|  ...|||||.+.... |+.++||||+|++|||++| |..||.+-. ..++.+.+
T Consensus       457 ~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~-ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l  535 (609)
T KOG0200|consen  457 IKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRV-FTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFL  535 (609)
T ss_pred             EEEccccceeccCCCCceEecCCCCccceeecCHHHhccCc-ccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHH
Confidence            9999999998654432222222233  33599999999854 7999999999999999998 899998755 66777778


Q ss_pred             HcCCC-CCCCCCChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         221 LNGKY-TEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       221 ~~~~~-~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      ..|.. ..|...++++.++++.|++.+|++||+..++.+
T Consensus       536 ~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  536 KEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             hcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence            88765 566778999999999999999999999998864


No 398
>KOG0984|consensus
Probab=100.00  E-value=1e-33  Score=251.62  Aligned_cols=212  Identities=19%  Similarity=0.391  Sum_probs=174.2

Q ss_pred             EEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhC-CCCCcceeeEEEEeCCEEEEEEeccC
Q psy6203          11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-SHQHICKLFQVIETSSHIFMVIEYCP   89 (568)
Q Consensus        11 ~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-~hpnIv~l~~~~~~~~~~~lV~E~~~   89 (568)
                      .-+..||+|++|.|-+.++..+|...|+|.+...-......++.+|+++..+. .+|.+|.+|+.......++|.||.+ 
T Consensus        49 ~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M-  127 (282)
T KOG0984|consen   49 VGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELM-  127 (282)
T ss_pred             hhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHh-
Confidence            34577999999999999999999999999998665444566778888876654 6999999999999999999999999 


Q ss_pred             CCChHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHc-CceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc
Q psy6203          90 GGELLDHIV----ERQRLGEKESRAFFRQILSAVAYLHHL-GYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL  164 (568)
Q Consensus        90 ~g~L~~~i~----~~~~l~~~~~~~i~~qi~~aL~~LH~~-~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~  164 (568)
                      ..+|..+..    ..+.++|..+-+|+..++.||.|||++ .|+|||+||+|||++.+|++|+||||++....++...  
T Consensus       128 ~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAk--  205 (282)
T KOG0984|consen  128 DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAK--  205 (282)
T ss_pred             hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHH--
Confidence            457765543    357899999999999999999999986 8999999999999999999999999998765543221  


Q ss_pred             ccccCCccccccccccC---cccCCcccceechhhHHHHHHhCCCCCCC-CCHHHHHHHHHcCCC
Q psy6203         165 QTSCGSPNYAAPEVIKG---KQYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGKY  225 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~---~~~~~~~~DiwSlG~il~~lltG~~pf~~-~~~~~~~~~i~~~~~  225 (568)
                      +...|...|||||.+..   ...|+-++||||||+++.||.+++.||+. .+.-+...++.....
T Consensus       206 t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep~  270 (282)
T KOG0984|consen  206 TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEPS  270 (282)
T ss_pred             HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCCC
Confidence            22457789999999853   23478899999999999999999999964 445555666655433


No 399
>KOG1025|consensus
Probab=100.00  E-value=4.3e-33  Score=290.16  Aligned_cols=246  Identities=25%  Similarity=0.411  Sum_probs=213.7

Q ss_pred             EEEeeecccCCeEEEEEEEcCCCc----EEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEe
Q psy6203          11 ILERTVGSGGFAKVKLATHVLTGE----KVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus        11 ~i~~~lG~G~~g~V~~~~~~~~~~----~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      +..++||+|+||+||+|.+.-.|+    +||+|++......+....+..|+-+|.+++|||++++++++.... +-||++
T Consensus       699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq  777 (1177)
T KOG1025|consen  699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQ  777 (1177)
T ss_pred             hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHH
Confidence            446889999999999998876654    689999887776666778899999999999999999999998766 789999


Q ss_pred             ccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccc-
Q psy6203          87 YCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQL-  164 (568)
Q Consensus        87 ~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~-  164 (568)
                      |+++|.|.++++. +.++.......|..||++|+.|||++++|||||-..|+|+.+-..+||.|||+++.......... 
T Consensus       778 ~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~  857 (1177)
T KOG1025|consen  778 LMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSA  857 (1177)
T ss_pred             hcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccc
Confidence            9999999999986 46799999999999999999999999999999999999999999999999999987655432221 


Q ss_pred             ccccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCC-CCCCCCCChHHHHHHHHc
Q psy6203         165 QTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQIVRSM  242 (568)
Q Consensus       165 ~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~li~~~  242 (568)
                      ....-.+.|||=|.+.... |+.++||||+||++||++| |..|+.+.+.+++-+.+..|. ++.|+..+-++.-++.+|
T Consensus       858 ~~gK~pikwmale~i~~~~-~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsqPpiCtiDVy~~mvkC  936 (1177)
T KOG1025|consen  858 PGGKVPIKWMALESIRIRK-YTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQPPICTIDVYMVMVKC  936 (1177)
T ss_pred             cccccCcHHHHHHHhhccC-CCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCCCCCccHHHHHHHHHH
Confidence            1112356799999988776 6999999999999999998 999999999999888887764 567788899999999999


Q ss_pred             cccCcCCCCCHHHHhc
Q psy6203         243 LQVEPGKRIKIQDLLG  258 (568)
Q Consensus       243 L~~dP~~Rps~~ell~  258 (568)
                      |..|++.||+++++..
T Consensus       937 wmid~~~rp~fkel~~  952 (1177)
T KOG1025|consen  937 WMIDADSRPTFKELAE  952 (1177)
T ss_pred             hccCcccCccHHHHHH
Confidence            9999999999998764


No 400
>KOG1167|consensus
Probab=100.00  E-value=3.6e-33  Score=273.37  Aligned_cols=254  Identities=30%  Similarity=0.486  Sum_probs=202.3

Q ss_pred             cccccCeEEEeeecccCCeEEEEEEEcC---CCcEEEEEEeecCCcCCchHHHHHHHHHHHhCC-CCCcceeeEEEEeCC
Q psy6203           4 IDLRNQYILERTVGSGGFAKVKLATHVL---TGEKVAIKIMKKATLGEDLPRVKLEINALKHIS-HQHICKLFQVIETSS   79 (568)
Q Consensus         4 ~~~~~~Y~i~~~lG~G~~g~V~~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~   79 (568)
                      ..+.+.|.++++||+|+|++||++.+..   .++.||+|.+....   .-.++.+|+++|..+. +.||+++.+.+..++
T Consensus        32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts---~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd  108 (418)
T KOG1167|consen   32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS---SPSRILNELEMLYRLGGSDNIIKLNGCFRNND  108 (418)
T ss_pred             hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc---CchHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence            4567889999999999999999999877   78899999887543   3457889999999995 899999999999999


Q ss_pred             EEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCC-CCeEEEeecCccCCCC
Q psy6203          80 HIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRN-QNLKLIDFGLCAKPEG  158 (568)
Q Consensus        80 ~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~-~~~kl~DFG~a~~~~~  158 (568)
                      ...+||||++..+..++..   .++..+++.+++.++.||.++|.+|||||||||+|+|.+.. +.-.|+|||+|.....
T Consensus       109 ~v~ivlp~~~H~~f~~l~~---~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~  185 (418)
T KOG1167|consen  109 QVAIVLPYFEHDRFRDLYR---SLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG  185 (418)
T ss_pred             eeEEEecccCccCHHHHHh---cCCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHh
Confidence            9999999999988887774   47799999999999999999999999999999999999754 6789999999861100


Q ss_pred             -------------------CCc------------------------cccccccCCccccccccccCcccCCcccceechh
Q psy6203         159 -------------------GLE------------------------SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMG  195 (568)
Q Consensus       159 -------------------~~~------------------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG  195 (568)
                                         +..                        ...-...||++|.|||++...+.-++++||||.|
T Consensus       186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~G  265 (418)
T KOG1167|consen  186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAG  265 (418)
T ss_pred             hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecc
Confidence                               000                        0000135899999999998877778999999999


Q ss_pred             hHHHHHHhCCCCCCCC--CHHHHHHHH-------------HcCC---------------------------CC-------
Q psy6203         196 VMLYALLCGFLPFDSD--SIDQLYDKI-------------LNGK---------------------------YT-------  226 (568)
Q Consensus       196 ~il~~lltG~~pf~~~--~~~~~~~~i-------------~~~~---------------------------~~-------  226 (568)
                      ||+..++++..||-..  +...+.+.+             ..|.                           .+       
T Consensus       266 VI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~  345 (418)
T KOG1167|consen  266 VILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTE  345 (418)
T ss_pred             ceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccccee
Confidence            9999999999998321  111111000             0011                           00       


Q ss_pred             ---CCCCCChHHHHHHHHccccCcCCCCCHHHHhcCcccc
Q psy6203         227 ---EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       227 ---~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                         .....+..+.+|+.+||..||.+|+|++++|.||||.
T Consensus       346 ~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~  385 (418)
T KOG1167|consen  346 REIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFD  385 (418)
T ss_pred             eccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCc
Confidence               0012345788999999999999999999999999998


No 401
>KOG2052|consensus
Probab=99.98  E-value=3.2e-32  Score=267.41  Aligned_cols=245  Identities=23%  Similarity=0.414  Sum_probs=190.1

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHH--hCCCCCcceeeEEEEeCC----
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALK--HISHQHICKLFQVIETSS----   79 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~--~l~hpnIv~l~~~~~~~~----   79 (568)
                      +..+-.+.+.||+|.||.||+|++  .|+.||||++...    +.....+|.+|.+  .|+|+||+.+++.-..++    
T Consensus       209 iarqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~sr----dE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~T  282 (513)
T KOG2052|consen  209 IARQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSR----DERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWT  282 (513)
T ss_pred             hhheeEEEEEecCccccceeeccc--cCCceEEEEeccc----chhhhhhHHHHHHHHHhccchhhhhhhccccCCCceE
Confidence            345678999999999999999997  5899999999753    3445667777766  469999999998764332    


Q ss_pred             EEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHc--------CceecCCCCCceEEcCCCCeEEEeec
Q psy6203          80 HIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHL--------GYAHRDLKPENVLLDRNQNLKLIDFG  151 (568)
Q Consensus        80 ~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~--------~ivHrDlkp~NIll~~~~~~kl~DFG  151 (568)
                      .++||++|.+.|||+|++.. ..++.+...+++..+++||++||..        .|.|||||..|||+..+|.+.|+|+|
T Consensus       283 QLwLvTdYHe~GSL~DyL~r-~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLG  361 (513)
T KOG2052|consen  283 QLWLVTDYHEHGSLYDYLNR-NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG  361 (513)
T ss_pred             EEEEeeecccCCcHHHHHhh-ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeece
Confidence            68999999999999999976 7799999999999999999999952        49999999999999999999999999


Q ss_pred             CccCCCCC---CccccccccCCccccccccccCccc----CC-cccceechhhHHHHHHh-----C-----CCCCCC---
Q psy6203         152 LCAKPEGG---LESQLQTSCGSPNYAAPEVIKGKQY----YG-SETDVWSMGVMLYALLC-----G-----FLPFDS---  210 (568)
Q Consensus       152 ~a~~~~~~---~~~~~~~~~gt~~y~aPE~l~~~~~----~~-~~~DiwSlG~il~~llt-----G-----~~pf~~---  210 (568)
                      +|......   ..-..+..+||..|||||++...-.    .+ ..+||||||.++||++.     |     .+||..   
T Consensus       362 LAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp  441 (513)
T KOG2052|consen  362 LAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVP  441 (513)
T ss_pred             eeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCC
Confidence            99765443   2234567799999999999864321    11 25899999999999975     2     567743   


Q ss_pred             --CCHHHHHHHHHcC--CCCCCC-CCCh----HHHHHHHHccccCcCCCCCHHHHh
Q psy6203         211 --DSIDQLYDKILNG--KYTEPP-WMSP----NSRQIVRSMLQVEPGKRIKIQDLL  257 (568)
Q Consensus       211 --~~~~~~~~~i~~~--~~~~~~-~~~~----~~~~li~~~L~~dP~~Rps~~ell  257 (568)
                        .+.+++.+-+.-.  .+.+|. |-+.    .+.++++.|+..||.-|.|+--+.
T Consensus       442 ~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK  497 (513)
T KOG2052|consen  442 SDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIK  497 (513)
T ss_pred             CCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence              3444544433332  223332 3332    346789999999999999986653


No 402
>KOG3653|consensus
Probab=99.98  E-value=2.3e-32  Score=270.38  Aligned_cols=241  Identities=23%  Similarity=0.368  Sum_probs=189.5

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHh--CCCCCcceeeEEEEeCC----EEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKH--ISHQHICKLFQVIETSS----HIF   82 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~--l~hpnIv~l~~~~~~~~----~~~   82 (568)
                      .-++.+.||+|.||.||+|.-  +++.||||++...    +.+.+.+|-+|.+.  ++|+||+++++.-+...    .++
T Consensus       211 pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~----~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eyw  284 (534)
T KOG3653|consen  211 PLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQ----EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYW  284 (534)
T ss_pred             chhhHHHhhcCccceeehhhc--cCceeEEEecCHH----HHHHHHhHHHHHhccCccchhHHHhhchhccCCcccccee
Confidence            345678999999999999984  6799999999753    34567778777764  57999999999876555    789


Q ss_pred             EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH---------cCceecCCCCCceEEcCCCCeEEEeecCc
Q psy6203          83 MVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH---------LGYAHRDLKPENVLLDRNQNLKLIDFGLC  153 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~---------~~ivHrDlkp~NIll~~~~~~kl~DFG~a  153 (568)
                      ||+||.+.|+|.+++.. ..+++....+++..+++||+|||+         ..|+|||||..|||+.++++..|+|||+|
T Consensus       285 LVt~fh~kGsL~dyL~~-ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA  363 (534)
T KOG3653|consen  285 LVTEFHPKGSLCDYLKA-NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA  363 (534)
T ss_pred             EEeeeccCCcHHHHHHh-ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence            99999999999999965 568999999999999999999996         35999999999999999999999999999


Q ss_pred             cCCCCCCc-cccccccCCccccccccccCcccCC-----cccceechhhHHHHHHhCC------------CCCC-----C
Q psy6203         154 AKPEGGLE-SQLQTSCGSPNYAAPEVIKGKQYYG-----SETDVWSMGVMLYALLCGF------------LPFD-----S  210 (568)
Q Consensus       154 ~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~-----~~~DiwSlG~il~~lltG~------------~pf~-----~  210 (568)
                      .....+.. ......+||..|||||++.|.-...     .+.||||+|.++|||++..            +||.     .
T Consensus       364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h  443 (534)
T KOG3653|consen  364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH  443 (534)
T ss_pred             EEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence            87654321 2233468999999999998764433     3579999999999999753            2332     1


Q ss_pred             CCHHHHHHHHHcC--CCCCCCC-----CChHHHHHHHHccccCcCCCCCHHHH
Q psy6203         211 DSIDQLYDKILNG--KYTEPPW-----MSPNSRQIVRSMLQVEPGKRIKIQDL  256 (568)
Q Consensus       211 ~~~~~~~~~i~~~--~~~~~~~-----~~~~~~~li~~~L~~dP~~Rps~~el  256 (568)
                      .+.+++.+.+...  ++.++..     ....+++.+..|+..||+.|.|+.=+
T Consensus       444 Pt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv  496 (534)
T KOG3653|consen  444 PTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCV  496 (534)
T ss_pred             CCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHH
Confidence            3445555554433  2333322     23457899999999999999997643


No 403
>KOG1345|consensus
Probab=99.97  E-value=1.4e-32  Score=253.72  Aligned_cols=255  Identities=27%  Similarity=0.462  Sum_probs=198.0

Q ss_pred             CccccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCC-CCCcceeeEE-EEeCC
Q psy6203           2 KYIDLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS-HQHICKLFQV-IETSS   79 (568)
Q Consensus         2 ~~~~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~-~~~~~   79 (568)
                      +..++.+.|.|.+.||+|.||.+.+|+|+.+++.+|+|.+.+...  ....|.+|..---.|. |.||+..|++ |++.+
T Consensus        18 ~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t--t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d   95 (378)
T KOG1345|consen   18 KKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT--TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSD   95 (378)
T ss_pred             cccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh--hHHHHHHHhccceeeccchhhhHHHHHHhhcCc
Confidence            346788999999999999999999999999999999999876542  3457888876544554 8999998875 68888


Q ss_pred             EEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEc-C-CCCeEEEeecCccCCC
Q psy6203          80 HIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLD-R-NQNLKLIDFGLCAKPE  157 (568)
Q Consensus        80 ~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~-~-~~~~kl~DFG~a~~~~  157 (568)
                      .++++|||++.|+|..-+.. ..+.|...+.++.|+++||.|+|++++||||||.+||||- . ...+||||||..+..+
T Consensus        96 ~YvF~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g  174 (378)
T KOG1345|consen   96 AYVFVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG  174 (378)
T ss_pred             eEEEeeccCccchhhhhcCc-ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccC
Confidence            99999999999999988755 4588999999999999999999999999999999999993 2 3479999999876543


Q ss_pred             CCCccccccccCCccccccccccCc----ccCCcccceechhhHHHHHHhCCCCCCCCCH----HHHHHHHHcCCCC-CC
Q psy6203         158 GGLESQLQTSCGSPNYAAPEVIKGK----QYYGSETDVWSMGVMLYALLCGFLPFDSDSI----DQLYDKILNGKYT-EP  228 (568)
Q Consensus       158 ~~~~~~~~~~~gt~~y~aPE~l~~~----~~~~~~~DiwSlG~il~~lltG~~pf~~~~~----~~~~~~i~~~~~~-~~  228 (568)
                      .-    ....--+..|.+||+....    -...+.+|||.||+++|.++||.+||.....    ..-+.+...+..+ .|
T Consensus       175 ~t----V~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P  250 (378)
T KOG1345|consen  175 TT----VKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALP  250 (378)
T ss_pred             ce----ehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCc
Confidence            21    1112235678999986422    2236678999999999999999999974322    2223333333332 22


Q ss_pred             ---CCCChHHHHHHHHccccCcCCC---CCHHHHhcCcccc
Q psy6203         229 ---PWMSPNSRQIVRSMLQVEPGKR---IKIQDLLGHNWVK  263 (568)
Q Consensus       229 ---~~~~~~~~~li~~~L~~dP~~R---ps~~ell~hp~~~  263 (568)
                         ..+++.+..+.++-|..+|++|   -++......-|..
T Consensus       251 ~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E  291 (378)
T KOG1345|consen  251 KKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKE  291 (378)
T ss_pred             hhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHH
Confidence               2378899999999999999999   4555555566653


No 404
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.97  E-value=9.3e-31  Score=247.90  Aligned_cols=213  Identities=46%  Similarity=0.777  Sum_probs=187.4

Q ss_pred             ecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccCCCChHH
Q psy6203          16 VGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCPGGELLD   95 (568)
Q Consensus        16 lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~~g~L~~   95 (568)
                      ||+|++|.||++....+++.+++|++...........+.+|+..++.++|++|+++++++......+++||++.|++|.+
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~   80 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD   80 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence            68999999999999888999999999865433234678899999999999999999999999899999999999999999


Q ss_pred             HHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcC-CCCeEEEeecCccCCCCCCccccccccCCccc
Q psy6203          96 HIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDR-NQNLKLIDFGLCAKPEGGLESQLQTSCGSPNY  173 (568)
Q Consensus        96 ~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~-~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y  173 (568)
                      ++... ..++...+..++.+++.+|.+||+.|++|+||+|.||+++. ++.++|+|||.+........ ......+...|
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-~~~~~~~~~~~  159 (215)
T cd00180          81 LLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-LLKTIVGTPAY  159 (215)
T ss_pred             HHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-hhhcccCCCCc
Confidence            98765 57899999999999999999999999999999999999998 89999999999876543211 12334578899


Q ss_pred             cccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCCCCH
Q psy6203         174 AAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKI  253 (568)
Q Consensus       174 ~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~  253 (568)
                      ++||.+.....++.++|+||+|+++++|                               ..+.+++.+|++.||++||++
T Consensus       160 ~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------~~~~~~l~~~l~~~p~~R~~~  208 (215)
T cd00180         160 MAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------PELKDLIRKMLQKDPEKRPSA  208 (215)
T ss_pred             cChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------HHHHHHHHHHhhCCcccCcCH
Confidence            9999987753468899999999999999                               688999999999999999999


Q ss_pred             HHHhcCc
Q psy6203         254 QDLLGHN  260 (568)
Q Consensus       254 ~ell~hp  260 (568)
                      .++++|+
T Consensus       209 ~~l~~~~  215 (215)
T cd00180         209 KEILEHL  215 (215)
T ss_pred             HHHhhCC
Confidence            9999875


No 405
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.97  E-value=1.3e-30  Score=250.51  Aligned_cols=219  Identities=42%  Similarity=0.680  Sum_probs=187.4

Q ss_pred             eEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccC
Q psy6203          10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCP   89 (568)
Q Consensus        10 Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~   89 (568)
                      |.+.+.||+|++|.||++.+..+++.+|+|.+...........+.+|+..+++++|+|++++++++......++++|+++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE   80 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence            67889999999999999999988999999999865433245678889999999999999999999999899999999999


Q ss_pred             CCChHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCcccccccc
Q psy6203          90 GGELLDHIVERQR-LGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSC  168 (568)
Q Consensus        90 ~g~L~~~i~~~~~-l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~  168 (568)
                      +++|.+++..... +++..+..++.+++.+|.+||+.+++|+||+|+||+++.++.++|+|||.+...............
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  160 (225)
T smart00221       81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVK  160 (225)
T ss_pred             CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccccccccee
Confidence            9999999987666 899999999999999999999999999999999999999999999999998765443211223456


Q ss_pred             CCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCC--CCHHHHHHHHHcCCCCCC
Q psy6203         169 GSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS--DSIDQLYDKILNGKYTEP  228 (568)
Q Consensus       169 gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~--~~~~~~~~~i~~~~~~~~  228 (568)
                      ++..|++||.+.+...++.++|+||||+++++|++|+.||..  .+...+.+.+..+.....
T Consensus       161 ~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~  222 (225)
T smart00221      161 GTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGVPLLW  222 (225)
T ss_pred             ccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCCcccc
Confidence            788999999984333357799999999999999999999977  455577888877765443


No 406
>KOG4717|consensus
Probab=99.97  E-value=1.3e-31  Score=266.24  Aligned_cols=219  Identities=23%  Similarity=0.432  Sum_probs=187.1

Q ss_pred             ccCCccCCCCcchhhh-----HHHHHHHHhC-CCCCChhhHHHHHHHHhhcc------------Ccce---------eEE
Q psy6203         325 KQGKQYYGSETDVWSM-----GVMLYALLCG-FLPFDSDSIDQLYDKILSHF------------MPIC---------TIL  377 (568)
Q Consensus       325 ~~~~~~~~~~~~~~~~-----g~~l~~~~~~-~~~~~e~~~~~~~~qil~~~------------~~~~---------~ik  377 (568)
                      .+....+.+.|.+|.+     ||+||+||-. ..-+.|+-++++|.||++++            +||.         -||
T Consensus        80 VRLYEViDTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVK  159 (864)
T KOG4717|consen   80 VRLYEVIDTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVK  159 (864)
T ss_pred             eeeeehhcccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceE
Confidence            3455667888888765     7899999775 34699999999999999873            4443         579


Q ss_pred             EccccCcccccCCCCceecccccccccccCCC--CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC
Q psy6203         378 ISQYFPTILLPCKVGQVINLLRSAIVLCSAPS--SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT  455 (568)
Q Consensus       378 i~dfG~~~~~~~~~~~~~~~~~gt~~~~~pe~--~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~  455 (568)
                      ++||||++.+  .+|..+.+.||+..|-|||.  +..|..++|||||||||||-|++|++||...|..+.+-.|+.+++.
T Consensus       160 LTDFGFSNkf--~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYt  237 (864)
T KOG4717|consen  160 LTDFGFSNKF--QPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYT  237 (864)
T ss_pred             eeeccccccC--CCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccccc
Confidence            9999998764  57888999999999999998  7888999999999999999999999999999999999999999999


Q ss_pred             CCCCCCHHHHHHHHHccCCCcCCCCCHHHHhcCcccccCCCCC----C------CCC-CChHHHHHHHhccCCCHHHHHH
Q psy6203         456 EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDN----P------LRE-KDDDVIKVMADHKQLSPDDMWS  524 (568)
Q Consensus       456 ~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~----~------~~~-~~~~~~~~~~~~~~~~~~~~~~  524 (568)
                      .|..+|.+|+|||..||+.||.+|.+.++|..|+|++......    |      +++ ....+++.|....-.+.+++.+
T Consensus       238 vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~~~sT~iPLvsr~~L~ee~Ha~IIq~Mv~G~IAs~e~Il~  317 (864)
T KOG4717|consen  238 VPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDRGLSTAIPLVSRHHLPEEAHATIIQQMVAGAIASEEDILR  317 (864)
T ss_pred             CchhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCCCccccCceeehhhCChHHHHHHHHHHhcccccCHHHHHH
Confidence            9999999999999999999999999999999999998543211    1      122 2344567777777789999999


Q ss_pred             HHHhcCCChHHHHHHHHHhch
Q psy6203         525 QLNEWTYNYDTCTYLLLLSRK  545 (568)
Q Consensus       525 ~l~~~~~~~~~~~~~~l~~~~  545 (568)
                      .|.+.+||+++|+||||.++.
T Consensus       318 aLe~n~YNhiTATYfLLAEr~  338 (864)
T KOG4717|consen  318 ALENNEYNHITATYFLLAERV  338 (864)
T ss_pred             HHhccccchhhhHHHHHHHHH
Confidence            999999999999999987654


No 407
>KOG0616|consensus
Probab=99.97  E-value=6.4e-31  Score=246.02  Aligned_cols=153  Identities=25%  Similarity=0.413  Sum_probs=140.2

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc--------------------CcceeEEEccccCcccccCCCCceecc
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF--------------------MPICTILISQYFPTILLPCKVGQVINL  397 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~--------------------~~~~~iki~dfG~~~~~~~~~~~~~~~  397 (568)
                      |..||+||.+++..++|+|..+|.+..||+.++                    .+.+.|||+|||||....   + .+.+
T Consensus       125 yv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~---~-rT~T  200 (355)
T KOG0616|consen  125 YVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS---G-RTWT  200 (355)
T ss_pred             ccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEec---C-cEEE
Confidence            666999999999999999999999999999874                    445678999999886543   2 2678


Q ss_pred             cccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCc
Q psy6203         398 LRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP  476 (568)
Q Consensus       398 ~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp  476 (568)
                      .||||.|+|||. ..++|+.+||||||||++|||++|.+||.+.++.+++++|+.+...+|+.+|++++|||+++|+.|-
T Consensus       201 lCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~  280 (355)
T KOG0616|consen  201 LCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYFSSDAKDLLKKLLQVDL  280 (355)
T ss_pred             ecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCcccCHHHHHHHHHHHhhhh
Confidence            999999999998 8899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCC-----CHHHHhcCcccccC
Q psy6203         477 GKRI-----KIQDLLGHNWVKMG  494 (568)
Q Consensus       477 ~~R~-----t~~~~l~hp~~~~~  494 (568)
                      .+|.     +..++..||||+..
T Consensus       281 t~R~gnlknG~~dIk~H~wF~~v  303 (355)
T KOG0616|consen  281 TKRFGNLKNGVEDIKNHPWFKGV  303 (355)
T ss_pred             HhhhcCcCCCccccccCcccccc
Confidence            9996     47899999999854


No 408
>KOG0575|consensus
Probab=99.96  E-value=2.7e-30  Score=264.01  Aligned_cols=166  Identities=22%  Similarity=0.421  Sum_probs=146.3

Q ss_pred             cCCCCcchhhh-----HHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Cc--------ceeEEEccccCc
Q psy6203         330 YYGSETDVWSM-----GVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MP--------ICTILISQYFPT  384 (568)
Q Consensus       330 ~~~~~~~~~~~-----g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~--------~~~iki~dfG~~  384 (568)
                      .++.+..||..     -+.|.++++.+++|.|.+||.+++||+.|+            +|        .-+|||+|||+|
T Consensus        86 ~FEDs~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLA  165 (592)
T KOG0575|consen   86 FFEDSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLA  165 (592)
T ss_pred             EeecCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEeccccee
Confidence            35555556554     378889999999999999999999999875            22        227999999987


Q ss_pred             ccccCCCCceecccccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHH
Q psy6203         385 ILLPCKVGQVINLLRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPN  463 (568)
Q Consensus       385 ~~~~~~~~~~~~~~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~  463 (568)
                      -.+.. ++....+.||||.|.|||+ .+.+|+..|||||+|||||.||.|+|||...+..+.+.+|....+.+|..+|.+
T Consensus       166 t~le~-~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~~ls~~  244 (592)
T KOG0575|consen  166 TQLEY-DGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPSHLSAE  244 (592)
T ss_pred             eeecC-cccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccccccCHH
Confidence            65432 4556789999999999999 899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHccCCCcCCCCCHHHHhcCcccccCCC
Q psy6203         464 SRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPE  496 (568)
Q Consensus       464 ~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~  496 (568)
                      |++||.+||..||.+|||+++++.|+||+.+..
T Consensus       245 A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~  277 (592)
T KOG0575|consen  245 AKDLIRKLLRPNPSERPSLDEVLDHPFFKSGFT  277 (592)
T ss_pred             HHHHHHHHhcCCcccCCCHHHHhcCHhhhCCCc
Confidence            999999999999999999999999999975533


No 409
>KOG0615|consensus
Probab=99.96  E-value=5.5e-31  Score=256.57  Aligned_cols=156  Identities=24%  Similarity=0.471  Sum_probs=136.6

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Cc-----------ceeEEEccccCcccccCCCCce
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MP-----------ICTILISQYFPTILLPCKVGQV  394 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~-----------~~~iki~dfG~~~~~~~~~~~~  394 (568)
                      |.-||+||+.+.+++.+.|+.-+.+|.|++.++            +|           .|.+||+|||+|...  ..+..
T Consensus       257 ~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~--g~~sf  334 (475)
T KOG0615|consen  257 YVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVS--GEGSF  334 (475)
T ss_pred             EecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhcc--cccee
Confidence            344999999999999999999999999999874            23           357899999987664  36778


Q ss_pred             ecccccccccccCCC----CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHH-HHHHHHcCCCCC--CC--CCCHHHH
Q psy6203         395 INLLRSAIVLCSAPS----SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQ-LYDKILNGKYTE--PP--WMSPNSR  465 (568)
Q Consensus       395 ~~~~~gt~~~~~pe~----~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~-~~~~i~~~~~~~--~~--~~s~~~~  465 (568)
                      +++.||||.|.|||+    +..+|+.+||+||+|||||.+++|.+||.+..... +.++|..|.+.+  +.  .+|++++
T Consensus       335 m~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~  414 (475)
T KOG0615|consen  335 MKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEAL  414 (475)
T ss_pred             hhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHH
Confidence            999999999999998    45578889999999999999999999999876555 889999999875  22  3899999


Q ss_pred             HHHHHccCCCcCCCCCHHHHhcCcccccCC
Q psy6203         466 QIVRSMLQVEPGKRIKIQDLLGHNWVKMGP  495 (568)
Q Consensus       466 ~li~~~L~~dp~~R~t~~~~l~hp~~~~~~  495 (568)
                      +||++||+.||++|+|++|+|+||||+..+
T Consensus       415 dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~  444 (475)
T KOG0615|consen  415 DLINWMLVVDPENRPSADEALNHPWFKDAP  444 (475)
T ss_pred             HHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence            999999999999999999999999998654


No 410
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.96  E-value=3.5e-30  Score=292.41  Aligned_cols=200  Identities=19%  Similarity=0.260  Sum_probs=147.9

Q ss_pred             HhCCC-CCcceeeEEE-------EeCCEEEEEEeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecC
Q psy6203          61 KHISH-QHICKLFQVI-------ETSSHIFMVIEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRD  131 (568)
Q Consensus        61 ~~l~h-pnIv~l~~~~-------~~~~~~~lV~E~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrD  131 (568)
                      +.++| +||+++++++       .....++.+||++ +++|.+++.. ...+++.+++.++.||+.||.|||++||+|||
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrD  105 (793)
T PLN00181         27 KSLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHN  105 (793)
T ss_pred             chhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence            34456 6888888877       2334577888987 6799999975 35699999999999999999999999999999


Q ss_pred             CCCCceEEcCCC-------------------CeEEEeecCccCCCCCC---------------ccccccccCCccccccc
Q psy6203         132 LKPENVLLDRNQ-------------------NLKLIDFGLCAKPEGGL---------------ESQLQTSCGSPNYAAPE  177 (568)
Q Consensus       132 lkp~NIll~~~~-------------------~~kl~DFG~a~~~~~~~---------------~~~~~~~~gt~~y~aPE  177 (568)
                      |||+||||+..|                   .+|++|||+++......               .......+||+.|+|||
T Consensus       106 lKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE  185 (793)
T PLN00181        106 VRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPE  185 (793)
T ss_pred             CCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChh
Confidence            999999996544                   45555666554321000               00011235899999999


Q ss_pred             cccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC-CCCCChHHHHHHHHccccCcCCCCCHHHH
Q psy6203         178 VIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE-PPWMSPNSRQIVRSMLQVEPGKRIKIQDL  256 (568)
Q Consensus       178 ~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~li~~~L~~dP~~Rps~~el  256 (568)
                      ++.+.. ++.++|||||||++|||++|.+|+....  .....+.....+. .....+...+++.+||++||.+|||+.|+
T Consensus       186 ~~~~~~-~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~ei  262 (793)
T PLN00181        186 EDNGSS-SNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSEL  262 (793)
T ss_pred             hhccCC-CCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHH
Confidence            998876 5899999999999999999998875432  1222222221111 11234567899999999999999999999


Q ss_pred             hcCccccc
Q psy6203         257 LGHNWVKM  264 (568)
Q Consensus       257 l~hp~~~~  264 (568)
                      ++||||..
T Consensus       263 l~h~~~~~  270 (793)
T PLN00181        263 LQSEFINE  270 (793)
T ss_pred             hhchhhhh
Confidence            99999974


No 411
>KOG0583|consensus
Probab=99.96  E-value=7.2e-29  Score=253.94  Aligned_cols=165  Identities=26%  Similarity=0.568  Sum_probs=146.8

Q ss_pred             CccCCCCcchh-----hhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc--------------------Ccc-eeEEEccc
Q psy6203         328 KQYYGSETDVW-----SMGVMLYALLCGFLPFDSDSIDQLYDKILSHF--------------------MPI-CTILISQY  381 (568)
Q Consensus       328 ~~~~~~~~~~~-----~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~--------------------~~~-~~iki~df  381 (568)
                      ...+.+.+++|     ..||+|++++...+++.|++++.+|+|+++|+                    ... .++||+||
T Consensus        86 ~ev~~t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DF  165 (370)
T KOG0583|consen   86 LEVFATPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDF  165 (370)
T ss_pred             EEEEecCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEecc
Confidence            44456666553     44899999999999999999999999999975                    334 79999999


Q ss_pred             cCcccccCCCCceecccccccccccCCC--CCC-CCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC
Q psy6203         382 FPTILLPCKVGQVINLLRSAIVLCSAPS--SKQ-YYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP  458 (568)
Q Consensus       382 G~~~~~~~~~~~~~~~~~gt~~~~~pe~--~~~-~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~  458 (568)
                      |++.... ..+....+.|||+.|+|||+  +.. |.+.++||||+||+||.|++|+.||...+...++.+|..+.+.+|.
T Consensus       166 G~s~~~~-~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~  244 (370)
T KOG0583|consen  166 GLSAISP-GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPS  244 (370)
T ss_pred             ccccccC-CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCC
Confidence            9887654 34456889999999999998  445 7789999999999999999999999999999999999999999999


Q ss_pred             CC-CHHHHHHHHHccCCCcCCCCCHHHHhcCccccc
Q psy6203         459 WM-SPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  493 (568)
Q Consensus       459 ~~-s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~  493 (568)
                      ++ |+++++||.+||..||.+|+|+.+++.||||+.
T Consensus       245 ~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  245 YLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             CcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            99 999999999999999999999999999999996


No 412
>KOG0604|consensus
Probab=99.95  E-value=8.4e-29  Score=231.87  Aligned_cols=193  Identities=19%  Similarity=0.343  Sum_probs=159.8

Q ss_pred             HHHHHHHHhCCC--CCChhhHHHHHHHHhhcc-----------------------CcceeEEEccccCcccccCCCCcee
Q psy6203         341 GVMLYALLCGFL--PFDSDSIDQLYDKILSHF-----------------------MPICTILISQYFPTILLPCKVGQVI  395 (568)
Q Consensus       341 g~~l~~~~~~~~--~~~e~~~~~~~~qil~~~-----------------------~~~~~iki~dfG~~~~~~~~~~~~~  395 (568)
                      ||+||.-+..++  +|.|.+|..|++||-.++                       -.+|.+|++|||||.....  ...+
T Consensus       143 GGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~--~~~L  220 (400)
T KOG0604|consen  143 GGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE--PGDL  220 (400)
T ss_pred             chHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCC--Cccc
Confidence            899998887655  599999999999998764                       2245789999998765432  3346


Q ss_pred             cccccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCC----HHHHHHHHHcCCCCCCC--C--CCHHHHH
Q psy6203         396 NLLRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYTEPP--W--MSPNSRQ  466 (568)
Q Consensus       396 ~~~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~----~~~~~~~i~~~~~~~~~--~--~s~~~~~  466 (568)
                      .+-|-||+|.|||+ +...|+.++|+||+||+||.|++|.|||.+..    ...+..+|..|.+.||.  |  +|+.++|
T Consensus       221 ~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKd  300 (400)
T KOG0604|consen  221 MTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKD  300 (400)
T ss_pred             cCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHH
Confidence            78899999999998 77789999999999999999999999998754    34577889999888764  3  8999999


Q ss_pred             HHHHccCCCcCCCCCHHHHhcCcccccCCCCCCCCCCChHHHHHHHhccCCCHHHHHHHHHhcCCChHH
Q psy6203         467 IVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLREKDDDVIKVMADHKQLSPDDMWSQLNEWTYNYDT  535 (568)
Q Consensus       467 li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  535 (568)
                      +|+++|..+|.+|+|+++++.|||+.........+......++...+.++..++++.+.|++++.++..
T Consensus       301 lIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tpl~t~~~l~~a~e~w~dvqeem~~~lA~mrv~~~~  369 (400)
T KOG0604|consen  301 LIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTPLSTSRMLKEAVEAWDDVQEEMTETLATMRVDPLQ  369 (400)
T ss_pred             HHHHHhcCCchhheeHHHhhcCchhcccccCCCCCchhhhhcchhhhhhHHHHHHHHHHHHhcccCcce
Confidence            999999999999999999999999998766555555555666666677777889999999998866543


No 413
>KOG0590|consensus
Probab=99.95  E-value=5.8e-30  Score=276.18  Aligned_cols=257  Identities=30%  Similarity=0.521  Sum_probs=203.6

Q ss_pred             cCe-EEEeeecccCCeEEEEEEEcCCCcEEEEEEeecC----CcCCc-hHHHHHHHHHHHhCCCCCcceeeEEEEeCCEE
Q psy6203           8 NQY-ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKA----TLGED-LPRVKLEINALKHISHQHICKLFQVIETSSHI   81 (568)
Q Consensus         8 ~~Y-~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~-~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~   81 (568)
                      ..| .-...+|.|++|.|+.+......+..+.|.+...    ..... ...+..|+-+-..+.|||++.....+.+....
T Consensus       317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~  396 (601)
T KOG0590|consen  317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGI  396 (601)
T ss_pred             cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccc
Confidence            345 4578899999999998888777776776655421    11111 12255577777889999998887777666655


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCc
Q psy6203          82 FMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLE  161 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~  161 (568)
                      +-+||||++ +|+.++...+.++..++..++.|++.||+|+|+.||.||||||+|++++.+|.+||+|||.+........
T Consensus       397 ~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e  475 (601)
T KOG0590|consen  397 LQSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE  475 (601)
T ss_pred             hhhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence            666999999 9999998888999999999999999999999999999999999999999999999999999876544333


Q ss_pred             ---cccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHH--H-------HHHcCCCCCCC
Q psy6203         162 ---SQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLY--D-------KILNGKYTEPP  229 (568)
Q Consensus       162 ---~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~--~-------~i~~~~~~~~~  229 (568)
                         ......+|+..|+|||++.+..+.....||||.|++++.|++|+.||......+..  .       .+..|......
T Consensus       476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~  555 (601)
T KOG0590|consen  476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLS  555 (601)
T ss_pred             hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHH
Confidence               33456689999999999999998888899999999999999999999654332211  1       11112222223


Q ss_pred             CCChHHHHHHHHccccCcCCCCCHHHHhcCcccccC
Q psy6203         230 WMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  265 (568)
Q Consensus       230 ~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~  265 (568)
                      .++.+.+.+|.+||++||.+|.|+++|++.+||+..
T Consensus       556 ~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i  591 (601)
T KOG0590|consen  556 LLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSI  591 (601)
T ss_pred             hchhhHHHHHHHHccCChhheecHHHHhhChHhhhc
Confidence            477888999999999999999999999999999853


No 414
>KOG0598|consensus
Probab=99.95  E-value=8.1e-29  Score=239.83  Aligned_cols=163  Identities=22%  Similarity=0.390  Sum_probs=141.2

Q ss_pred             CCCCcch-----hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Ccc--------eeEEEccccCcc
Q psy6203         331 YGSETDV-----WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MPI--------CTILISQYFPTI  385 (568)
Q Consensus       331 ~~~~~~~-----~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~~--------~~iki~dfG~~~  385 (568)
                      +++..+.     |..||+|+-+|...+.|+|+.|+.++..|+.|+            +||        ++|+++|||++.
T Consensus        94 FQt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k  173 (357)
T KOG0598|consen   94 FQTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCK  173 (357)
T ss_pred             cccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccch
Confidence            4555555     445999999999999999999999999999874            344        478999999776


Q ss_pred             cccCCCCceecccccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCHH
Q psy6203         386 LLPCKVGQVINLLRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPN  463 (568)
Q Consensus       386 ~~~~~~~~~~~~~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~s~~  463 (568)
                      .. ++.+....++|||+.|||||. .+.+|+.+||||||||++|||++|.+||.+.+...++++|..++.. .|..+|++
T Consensus       174 ~~-~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~~ls~~  252 (357)
T KOG0598|consen  174 ED-LKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPGYLSEE  252 (357)
T ss_pred             hc-ccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCccCCHH
Confidence            43 344556788999999999998 7779999999999999999999999999999999999999999955 45559999


Q ss_pred             HHHHHHHccCCCcCCCC----CHHHHhcCcccccC
Q psy6203         464 SRQIVRSMLQVEPGKRI----KIQDLLGHNWVKMG  494 (568)
Q Consensus       464 ~~~li~~~L~~dp~~R~----t~~~~l~hp~~~~~  494 (568)
                      +++||+++|.+||++|+    ++.++.+||||+.-
T Consensus       253 ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~i  287 (357)
T KOG0598|consen  253 ARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGI  287 (357)
T ss_pred             HHHHHHHHhccCHHHhcCCCCChHHhhcCcccccC
Confidence            99999999999999997    48899999999853


No 415
>KOG1024|consensus
Probab=99.95  E-value=4.1e-28  Score=234.51  Aligned_cols=251  Identities=20%  Similarity=0.250  Sum_probs=204.8

Q ss_pred             ccCeEEEeeecccCCeEEEEEEEcCCC-----cEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEE-eCCE
Q psy6203           7 RNQYILERTVGSGGFAKVKLATHVLTG-----EKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIE-TSSH   80 (568)
Q Consensus         7 ~~~Y~i~~~lG~G~~g~V~~~~~~~~~-----~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~-~~~~   80 (568)
                      +.++++...+-+|.||.||.|.++...     +.|-+|.++.....-....+..|--.+..+.|||+..+.++.. +...
T Consensus       283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~  362 (563)
T KOG1024|consen  283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYAT  362 (563)
T ss_pred             hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCc
Confidence            356788888999999999999765432     3455677665443334556777888888899999999999874 4456


Q ss_pred             EEEEEeccCCCChHHHHHhc--------CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecC
Q psy6203          81 IFMVIEYCPGGELLDHIVER--------QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGL  152 (568)
Q Consensus        81 ~~lV~E~~~~g~L~~~i~~~--------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~  152 (568)
                      .+.++.+..-|+|..++...        +.++..+...++.|++.|++|||+.||||.||-..|.+|++.-++||+|=.+
T Consensus       363 P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaL  442 (563)
T KOG1024|consen  363 PFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSAL  442 (563)
T ss_pred             ceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchh
Confidence            78888999889999999731        2466778888999999999999999999999999999999999999999999


Q ss_pred             ccCCCCCCcccccc-ccCCccccccccccCcccCCcccceechhhHHHHHHh-CCCCCCCCCHHHHHHHHHcCCC-CCCC
Q psy6203         153 CAKPEGGLESQLQT-SCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLC-GFLPFDSDSIDQLYDKILNGKY-TEPP  229 (568)
Q Consensus       153 a~~~~~~~~~~~~~-~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~llt-G~~pf~~~~~~~~~~~i~~~~~-~~~~  229 (568)
                      ++..-+....-+.. .-....|||||.+.+.. |+.++|+|||||++|||+| |+.|+..-++.++..-++.|.. ..|-
T Consensus       443 SRDLFP~DYhcLGDnEnRPvkWMslEal~n~~-yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP~  521 (563)
T KOG1024|consen  443 SRDLFPGDYHCLGDNENRPVKWMSLEALQNSH-YSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQPF  521 (563)
T ss_pred             ccccCcccccccCCCCCCcccccCHHHHhhhh-hcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceecCCC
Confidence            88754432221111 12345799999999877 6999999999999999998 9999999999999998888854 5566


Q ss_pred             CCChHHHHHHHHccccCcCCCCCHHHHhc
Q psy6203         230 WMSPNSRQIVRSMLQVEPGKRIKIQDLLG  258 (568)
Q Consensus       230 ~~~~~~~~li~~~L~~dP~~Rps~~ell~  258 (568)
                      +.++++..++.-||..+|++||+.+|+..
T Consensus       522 NCPDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  522 NCPDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             CCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            79999999999999999999999999853


No 416
>KOG0660|consensus
Probab=99.95  E-value=4.2e-28  Score=234.02  Aligned_cols=170  Identities=19%  Similarity=0.234  Sum_probs=136.8

Q ss_pred             CCCcchhh----hHHHHHHHHhCCCCCChhhHHHHHHHHhhcc--------------------CcceeEEEccccCcccc
Q psy6203         332 GSETDVWS----MGVMLYALLCGFLPFDSDSIDQLYDKILSHF--------------------MPICTILISQYFPTILL  387 (568)
Q Consensus       332 ~~~~~~~~----~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~--------------------~~~~~iki~dfG~~~~~  387 (568)
                      ..-.|+|.    |+.+|.++++....|+++-++.++.|+|.|+                    ...|.+||||||+|+..
T Consensus        96 ~~f~DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~  175 (359)
T KOG0660|consen   96 DKFNDVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYL  175 (359)
T ss_pred             cccceeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeec
Confidence            33445554    4889999999887899999999999999874                    33567899999998876


Q ss_pred             cCC-CCceecccccccccccCCC--CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-----------
Q psy6203         388 PCK-VGQVINLLRSAIVLCSAPS--SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK-----------  453 (568)
Q Consensus       388 ~~~-~~~~~~~~~gt~~~~~pe~--~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~-----------  453 (568)
                      ... ....++..+.|.||.|||.  ....|+.++||||+|||++||++|++.|+|.+..+++..|+.-.           
T Consensus       176 ~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i  255 (359)
T KOG0660|consen  176 DKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKI  255 (359)
T ss_pred             cccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHh
Confidence            432 1234677899999999998  78889999999999999999999999999998877776664411           


Q ss_pred             ------------CCCC--------CCCCHHHHHHHHHccCCCcCCCCCHHHHhcCcccccCCCCCCCC
Q psy6203         454 ------------YTEP--------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPEDNPLR  501 (568)
Q Consensus       454 ------------~~~~--------~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~~~~  501 (568)
                                  +..|        +..++.+.||+.+||++||.+|+|++|+|+|||+.....+...|
T Consensus       256 ~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~~~hdp~dEP  323 (359)
T KOG0660|consen  256 RSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLAPYHDPEDEP  323 (359)
T ss_pred             ccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhhhhcCCccCC
Confidence                        1111        34799999999999999999999999999999999765544433


No 417
>KOG0599|consensus
Probab=99.95  E-value=2.6e-28  Score=225.66  Aligned_cols=150  Identities=23%  Similarity=0.425  Sum_probs=135.4

Q ss_pred             HHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Cc--------ceeEEEccccCcccccCCCCceeccccc
Q psy6203         341 GVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MP--------ICTILISQYFPTILLPCKVGQVINLLRS  400 (568)
Q Consensus       341 g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~--------~~~iki~dfG~~~~~~~~~~~~~~~~~g  400 (568)
                      -|+||+++...-.++|+++|.||+|++.++            +|        +-||||+|||||..  ..+|..++..||
T Consensus       107 rGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~--l~~GekLrelCG  184 (411)
T KOG0599|consen  107 RGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQ--LEPGEKLRELCG  184 (411)
T ss_pred             cchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeec--cCCchhHHHhcC
Confidence            489999999999999999999999999874            33        33789999998765  457888999999


Q ss_pred             ccccccCCC-------CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC--CCC--CCHHHHHHHH
Q psy6203         401 AIVLCSAPS-------SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE--PPW--MSPNSRQIVR  469 (568)
Q Consensus       401 t~~~~~pe~-------~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~--~~~--~s~~~~~li~  469 (568)
                      ||.|.|||.       ...+|+..||+||+|||||.++.|.+||-.....-+++.|..|.+.+  |.|  .|...+|||+
T Consensus       185 TPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIs  264 (411)
T KOG0599|consen  185 TPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLIS  264 (411)
T ss_pred             CCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHH
Confidence            999999995       67899999999999999999999999999888888899999998875  555  7899999999


Q ss_pred             HccCCCcCCCCCHHHHhcCcccc
Q psy6203         470 SMLQVEPGKRIKIQDLLGHNWVK  492 (568)
Q Consensus       470 ~~L~~dp~~R~t~~~~l~hp~~~  492 (568)
                      +||+.||.+|+|++|+|+||||.
T Consensus       265 rlLqVdp~~Ritake~LaHpff~  287 (411)
T KOG0599|consen  265 RLLQVDPTKRITAKEALAHPFFI  287 (411)
T ss_pred             HHHeeCchhcccHHHHhcChHHH
Confidence            99999999999999999999995


No 418
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.95  E-value=8.8e-28  Score=222.53  Aligned_cols=158  Identities=30%  Similarity=0.382  Sum_probs=128.5

Q ss_pred             CChHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCCccccccccC
Q psy6203          91 GELLDHIVER-QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCG  169 (568)
Q Consensus        91 g~L~~~i~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~g  169 (568)
                      |+|.+++..+ ..+++.+++.++.||+.||.|||+++      ||+|||++.++.+|+  ||++......      ...|
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~------~~~g   66 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE------QSRV   66 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc------cCCC
Confidence            6899999874 56999999999999999999999998      999999999999999  9998764332      2268


Q ss_pred             CccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCH-HHHHHHHHcCCCCC-------CCCCCh--HHHHHH
Q psy6203         170 SPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSI-DQLYDKILNGKYTE-------PPWMSP--NSRQIV  239 (568)
Q Consensus       170 t~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~-~~~~~~i~~~~~~~-------~~~~~~--~~~~li  239 (568)
                      |+.|+|||++.+.. ++.++|||||||++|+|++|..||..... ......+..+....       +..++.  .+.++|
T Consensus        67 ~~~y~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  145 (176)
T smart00750       67 DPYFMAPEVIQGQS-YTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFM  145 (176)
T ss_pred             cccccChHHhcCCC-CcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHH
Confidence            99999999998876 58999999999999999999999975432 23333333222211       112333  689999


Q ss_pred             HHccccCcCCCCCHHHHhcCcccc
Q psy6203         240 RSMLQVEPGKRIKIQDLLGHNWVK  263 (568)
Q Consensus       240 ~~~L~~dP~~Rps~~ell~hp~~~  263 (568)
                      .+||..||.+|||+.|++.|+|+.
T Consensus       146 ~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750      146 RVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHhcccccccCHHHHHHHHHHH
Confidence            999999999999999999999986


No 419
>KOG0033|consensus
Probab=99.95  E-value=7.4e-28  Score=219.51  Aligned_cols=151  Identities=25%  Similarity=0.480  Sum_probs=132.8

Q ss_pred             HHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Ccc-----------eeEEEccccCcccccCCCCceecc
Q psy6203         341 GVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MPI-----------CTILISQYFPTILLPCKVGQVINL  397 (568)
Q Consensus       341 g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~~-----------~~iki~dfG~~~~~~~~~~~~~~~  397 (568)
                      |++|+.-+..+.-|+|..+--+++|||.++            .+|           .-+|++|||.|....  .|.+...
T Consensus        94 G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~--~g~~~~G  171 (355)
T KOG0033|consen   94 GGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN--DGEAWHG  171 (355)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC--Ccccccc
Confidence            677766555557899999999999999875            222           358999999765543  6777888


Q ss_pred             cccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC----CCCHHHHHHHHHcc
Q psy6203         398 LRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP----WMSPNSRQIVRSML  472 (568)
Q Consensus       398 ~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~----~~s~~~~~li~~~L  472 (568)
                      .+|||.||+||+ .+..|+.++||||+|||||.|+.|.+||.+++...+++.|..+.+..|+    .+|+++++||++||
T Consensus       172 ~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML  251 (355)
T KOG0033|consen  172 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRML  251 (355)
T ss_pred             ccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHh
Confidence            999999999998 8899999999999999999999999999999999999999999887543    38999999999999


Q ss_pred             CCCcCCCCCHHHHhcCccccc
Q psy6203         473 QVEPGKRIKIQDLLGHNWVKM  493 (568)
Q Consensus       473 ~~dp~~R~t~~~~l~hp~~~~  493 (568)
                      ..||.+|+|+.|+|+|||+++
T Consensus       252 ~~dP~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  252 TVNPKKRITADEALKHPWICN  272 (355)
T ss_pred             ccChhhhccHHHHhCCchhcc
Confidence            999999999999999999975


No 420
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.94  E-value=1.6e-26  Score=234.43  Aligned_cols=177  Identities=21%  Similarity=0.250  Sum_probs=135.6

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcC-CCcEEEEEEeecCCc----CCchHHHHHHHHHHHhCCCCCcce-eeEEEEeC
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVL-TGEKVAIKIMKKATL----GEDLPRVKLEINALKHISHQHICK-LFQVIETS   78 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~-~~~~vavK~~~~~~~----~~~~~~~~~Ei~~l~~l~hpnIv~-l~~~~~~~   78 (568)
                      .+.++|.+.+.||+|+||+||+|++.. +++.||||++.....    ......+.+|+.+|++++|+||+. +++.    
T Consensus        15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~----   90 (365)
T PRK09188         15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT----   90 (365)
T ss_pred             cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence            456889999999999999999999876 677789998753311    112456889999999999999985 5432    


Q ss_pred             CEEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCC-CCCceEEcCCCCeEEEeecCccCCC
Q psy6203          79 SHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDL-KPENVLLDRNQNLKLIDFGLCAKPE  157 (568)
Q Consensus        79 ~~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDl-kp~NIll~~~~~~kl~DFG~a~~~~  157 (568)
                      +..|+||||++|++|.. +.   ...   ...++.|++.||.|||++||+|||| ||+|||++.++.+||+|||+|+...
T Consensus        91 ~~~~LVmE~~~G~~L~~-~~---~~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~  163 (365)
T PRK09188         91 GKDGLVRGWTEGVPLHL-AR---PHG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFR  163 (365)
T ss_pred             CCcEEEEEccCCCCHHH-hC---ccc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecc
Confidence            45799999999999963 21   111   1468899999999999999999999 9999999999999999999998544


Q ss_pred             CCCc-------cccccccCCccccccccccCcc-----cCCccccee
Q psy6203         158 GGLE-------SQLQTSCGSPNYAAPEVIKGKQ-----YYGSETDVW  192 (568)
Q Consensus       158 ~~~~-------~~~~~~~gt~~y~aPE~l~~~~-----~~~~~~Diw  192 (568)
                      ....       .......+++.|+|||.+....     ..+..+|-|
T Consensus       164 ~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW  210 (365)
T PRK09188        164 RRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW  210 (365)
T ss_pred             cCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence            3211       1123557889999999985432     123446766


No 421
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.94  E-value=1.8e-25  Score=226.39  Aligned_cols=252  Identities=35%  Similarity=0.599  Sum_probs=210.6

Q ss_pred             eEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--chHHHHHHHHHHHhCCCC-CcceeeEEEEeCCEEEEEEe
Q psy6203          10 YILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--DLPRVKLEINALKHISHQ-HICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus        10 Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~~~~Ei~~l~~l~hp-nIv~l~~~~~~~~~~~lV~E   86 (568)
                      |.+.+.||.|+||.||++.+.   ..+|+|.+.......  ....+.+|+.++..+.|+ +|+++.+.+......+++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~   78 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVME   78 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEe
Confidence            789999999999999999987   789999998766544  366788999999999988 79999999988888899999


Q ss_pred             ccCCCChHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCC-CeEEEeecCccCCCCCCcc
Q psy6203          87 YCPGGELLDHIVERQ---RLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQ-NLKLIDFGLCAKPEGGLES  162 (568)
Q Consensus        87 ~~~~g~L~~~i~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-~~kl~DFG~a~~~~~~~~~  162 (568)
                      ++.++++.+.+....   .+++..+..++.|++.++.|+|+.+++|||+||+||+++..+ .++++|||.+.........
T Consensus        79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~  158 (384)
T COG0515          79 YVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGST  158 (384)
T ss_pred             cCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCcc
Confidence            999999997777664   799999999999999999999999999999999999999988 7999999998754332211


Q ss_pred             -----ccccccCCccccccccccCc--ccCCcccceechhhHHHHHHhCCCCCCCCC----HHHHHHHHHcCCCC-CCCC
Q psy6203         163 -----QLQTSCGSPNYAAPEVIKGK--QYYGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYT-EPPW  230 (568)
Q Consensus       163 -----~~~~~~gt~~y~aPE~l~~~--~~~~~~~DiwSlG~il~~lltG~~pf~~~~----~~~~~~~i~~~~~~-~~~~  230 (568)
                           ......||..|+|||.+.+.  ..++...|+||+|++++++++|..||....    .......+...... ....
T Consensus       159 ~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (384)
T COG0515         159 SSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASP  238 (384)
T ss_pred             ccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccc
Confidence                 24567899999999999874  356889999999999999999999987765    34555555444433 2222


Q ss_pred             CC--------hHHHHHHHHccccCcCCCCCHHHHhcCccccc
Q psy6203         231 MS--------PNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  264 (568)
Q Consensus       231 ~~--------~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  264 (568)
                      ..        ..+.+++..++..+|..|.+..+...++|...
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  280 (384)
T COG0515         239 LSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAH  280 (384)
T ss_pred             cCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhC
Confidence            11        47899999999999999999999999977663


No 422
>KOG0581|consensus
Probab=99.94  E-value=4.9e-27  Score=227.54  Aligned_cols=154  Identities=21%  Similarity=0.314  Sum_probs=134.4

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc-------------Cc--------ceeEEEccccCcccccCCCCceec
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF-------------MP--------ICTILISQYFPTILLPCKVGQVIN  396 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~-------------~~--------~~~iki~dfG~~~~~~~~~~~~~~  396 (568)
                      |-.||+|..+++..+.++|.....+..++|+|+             +|        .+.|||||||.+..+...   ...
T Consensus       159 YMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS---~a~  235 (364)
T KOG0581|consen  159 YMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS---IAN  235 (364)
T ss_pred             hcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh---hcc
Confidence            334888888888888999999999999999874             33        347899999977655433   578


Q ss_pred             ccccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCC-----CHHHHHHHHHcCCCC-CCCC-CCHHHHHHH
Q psy6203         397 LLRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSD-----SIDQLYDKILNGKYT-EPPW-MSPNSRQIV  468 (568)
Q Consensus       397 ~~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~-----~~~~~~~~i~~~~~~-~~~~-~s~~~~~li  468 (568)
                      +++||..|||||. .+..|+.++||||||+++.||++|+.||...     +..+++..|..+.++ .|.. +|+++++||
T Consensus       236 tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef~~FV  315 (364)
T KOG0581|consen  236 TFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEFRSFV  315 (364)
T ss_pred             cccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHHHHHH
Confidence            9999999999998 8889999999999999999999999999875     678899999997655 6775 999999999


Q ss_pred             HHccCCCcCCCCCHHHHhcCcccccC
Q psy6203         469 RSMLQVEPGKRIKIQDLLGHNWVKMG  494 (568)
Q Consensus       469 ~~~L~~dp~~R~t~~~~l~hp~~~~~  494 (568)
                      ..||++||.+|+|+.|+++|||++..
T Consensus       316 ~~CL~Kdp~~R~s~~qLl~Hpfi~~~  341 (364)
T KOG0581|consen  316 SCCLRKDPSERPSAKQLLQHPFIKKF  341 (364)
T ss_pred             HHHhcCCcccCCCHHHHhcCHHHhhc
Confidence            99999999999999999999999854


No 423
>KOG0661|consensus
Probab=99.94  E-value=4e-27  Score=233.55  Aligned_cols=153  Identities=22%  Similarity=0.301  Sum_probs=130.5

Q ss_pred             hHHHHHHHHhC-CCCCChhhHHHHHHHHhhcc------------Ccc--------eeEEEccccCcccccCCCCceeccc
Q psy6203         340 MGVMLYALLCG-FLPFDSDSIDQLYDKILSHF------------MPI--------CTILISQYFPTILLPCKVGQVINLL  398 (568)
Q Consensus       340 ~g~~l~~~~~~-~~~~~e~~~~~~~~qil~~~------------~~~--------~~iki~dfG~~~~~~~~~~~~~~~~  398 (568)
                      |.++||+++++ ..+|+|++|+.||.||++|+            +||        -.|||+|||+|+-....+.  .+.+
T Consensus        92 Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpP--YTeY  169 (538)
T KOG0661|consen   92 MDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPP--YTEY  169 (538)
T ss_pred             hhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCCC--cchh
Confidence            47999999997 46899999999999999874            333        3589999998887655443  6788


Q ss_pred             ccccccccCCC--CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHc--CC-----------------CCCC
Q psy6203         399 RSAIVLCSAPS--SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN--GK-----------------YTEP  457 (568)
Q Consensus       399 ~gt~~~~~pe~--~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~--~~-----------------~~~~  457 (568)
                      +.|.||.|||+  ...+|+.++||||+|||++|+.+-+|.|+|.+..+++.+|+.  |.                 +.+|
T Consensus       170 VSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P  249 (538)
T KOG0661|consen  170 VSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFP  249 (538)
T ss_pred             hhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCC
Confidence            99999999998  888999999999999999999999999999999998888754  11                 1122


Q ss_pred             -----------CCCCHHHHHHHHHccCCCcCCCCCHHHHhcCcccccC
Q psy6203         458 -----------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  494 (568)
Q Consensus       458 -----------~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~  494 (568)
                                 +..++++.+||.+||..||++||||+|+++||||+..
T Consensus       250 ~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~  297 (538)
T KOG0661|consen  250 QVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG  297 (538)
T ss_pred             cCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence                       2268999999999999999999999999999999854


No 424
>KOG1164|consensus
Probab=99.94  E-value=2.1e-25  Score=226.78  Aligned_cols=248  Identities=27%  Similarity=0.352  Sum_probs=193.7

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCC-cEEEEEEeecCCcCCchHHHHHHHHHHHhCCC----CCcceeeEEE-EeCCEEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTG-EKVAIKIMKKATLGEDLPRVKLEINALKHISH----QHICKLFQVI-ETSSHIF   82 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~-~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~h----pnIv~l~~~~-~~~~~~~   82 (568)
                      +|.+.+.||+|+||.||+|.+..++ ..+|+|+.......... .+..|+.++..+..    +++..+++.. ......|
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~   97 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNF   97 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeE
Confidence            8999999999999999999988775 67899987765433222 67889999998862    6899999999 5777899


Q ss_pred             EEEeccCCCChHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCC-----CCeEEEeecCcc-
Q psy6203          83 MVIEYCPGGELLDHIVER--QRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRN-----QNLKLIDFGLCA-  154 (568)
Q Consensus        83 lV~E~~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~-----~~~kl~DFG~a~-  154 (568)
                      +||+.+ |.+|.++....  +.++...+..++.|++.+|++||+.|++||||||+|+++...     ..+.|.|||+++ 
T Consensus        98 iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~  176 (322)
T KOG1164|consen   98 IVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARR  176 (322)
T ss_pred             EEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCcc
Confidence            999999 89999987543  579999999999999999999999999999999999999765     359999999998 


Q ss_pred             -CCCCCCc-----c-c-cccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHH---HHHHHHHcC
Q psy6203         155 -KPEGGLE-----S-Q-LQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSID---QLYDKILNG  223 (568)
Q Consensus       155 -~~~~~~~-----~-~-~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~---~~~~~i~~~  223 (568)
                       .......     . . .....||..|+++.+..+... +.+.|+||++.++.+++.|..||.+....   .........
T Consensus       177 ~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~-~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~  255 (322)
T KOG1164|consen  177 FKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQ-GRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRK  255 (322)
T ss_pred             ccccCCCCcccccCCCCccCCCCccccccHHHhCCCcc-CCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhh
Confidence             3222111     0 0 123459999999999988874 89999999999999999999999765422   112222221


Q ss_pred             CCC--CCCCCChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         224 KYT--EPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       224 ~~~--~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      ...  .....+..+.++...+-..+...+|....+...
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~  293 (322)
T KOG1164|consen  256 LLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAEL  293 (322)
T ss_pred             hccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence            111  123345677788777777889999988777554


No 425
>KOG0605|consensus
Probab=99.93  E-value=1.8e-26  Score=232.45  Aligned_cols=156  Identities=20%  Similarity=0.300  Sum_probs=131.3

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------C--------cceeEEEccccCcccccC--------
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------M--------PICTILISQYFPTILLPC--------  389 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~--------~~~~iki~dfG~~~~~~~--------  389 (568)
                      |..||++..+|-..+.|+|+.+++++.+.+-|+            +        ..++||++|||++..+.+        
T Consensus       222 ylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~  301 (550)
T KOG0605|consen  222 YLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYR  301 (550)
T ss_pred             ecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhc
Confidence            556999999999999999999999999988653            3        346899999997633211        


Q ss_pred             ---------------CCC-----c------------------eecccccccccccCCC-CCCCCCCccceeehhHHHHHH
Q psy6203         390 ---------------KVG-----Q------------------VINLLRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYAL  430 (568)
Q Consensus       390 ---------------~~~-----~------------------~~~~~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~em  430 (568)
                                     +..     .                  .....+|||-|+|||+ .+++|+..|||||||||||||
T Consensus       302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEm  381 (550)
T KOG0605|consen  302 LDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEM  381 (550)
T ss_pred             chhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHHHHHHHHHH
Confidence                           000     0                  1123789999999999 788899999999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHcCC--CCCCCC--CCHHHHHHHHHccCCCcCCCCC---HHHHhcCcccccC
Q psy6203         431 LCGFLPFDSDSIDQLYDKILNGK--YTEPPW--MSPNSRQIVRSMLQVEPGKRIK---IQDLLGHNWVKMG  494 (568)
Q Consensus       431 l~g~~pf~~~~~~~~~~~i~~~~--~~~~~~--~s~~~~~li~~~L~~dp~~R~t---~~~~l~hp~~~~~  494 (568)
                      |.|.|||.++++.+++++|....  +.+|..  .|++++|||.+||+ ||++|++   ++||.+||||+..
T Consensus       382 LvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v  451 (550)
T KOG0605|consen  382 LVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGV  451 (550)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccC
Confidence            99999999999999999998865  556644  78999999999998 9999996   8999999999854


No 426
>KOG0694|consensus
Probab=99.93  E-value=1.2e-26  Score=240.15  Aligned_cols=165  Identities=18%  Similarity=0.286  Sum_probs=143.0

Q ss_pred             CccCCCCcch-----hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc--------------------CcceeEEEcccc
Q psy6203         328 KQYYGSETDV-----WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF--------------------MPICTILISQYF  382 (568)
Q Consensus       328 ~~~~~~~~~~-----~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~--------------------~~~~~iki~dfG  382 (568)
                      ...|++++++     |..||+ +-++...+.|+|..|+.+...|+.|+                    +.-+.+||+|||
T Consensus       435 ~~~fQT~~~l~fvmey~~Ggd-m~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFG  513 (694)
T KOG0694|consen  435 FSCFQTKEHLFFVMEYVAGGD-LMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFG  513 (694)
T ss_pred             ccccccCCeEEEEEEecCCCc-EEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccc
Confidence            3448888888     455888 44444458999999999999998874                    345689999999


Q ss_pred             CcccccCCCCceecccccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Q psy6203         383 PTILLPCKVGQVINLLRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMS  461 (568)
Q Consensus       383 ~~~~~~~~~~~~~~~~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s  461 (568)
                      ++.-... .|..+.|+||||.|||||+ ....|+.+||||||||+||||+.|++||+|++..+++..|....+..|.++|
T Consensus       514 lcKe~m~-~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~ls  592 (694)
T KOG0694|consen  514 LCKEGMG-QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS  592 (694)
T ss_pred             cccccCC-CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCccc
Confidence            6554432 3456889999999999999 8889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHccCCCcCCCCC-----HHHHhcCcccccC
Q psy6203         462 PNSRQIVRSMLQVEPGKRIK-----IQDLLGHNWVKMG  494 (568)
Q Consensus       462 ~~~~~li~~~L~~dp~~R~t-----~~~~l~hp~~~~~  494 (568)
                      .++.++++++|.+||++|++     ++++++||||+.-
T Consensus       593 ~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i  630 (694)
T KOG0694|consen  593 KEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSI  630 (694)
T ss_pred             HHHHHHHHHHhccCcccccCCCCCCchhhhhCCccccC
Confidence            99999999999999999997     5899999999843


No 427
>KOG0592|consensus
Probab=99.93  E-value=2e-26  Score=231.99  Aligned_cols=157  Identities=20%  Similarity=0.331  Sum_probs=138.0

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Cc--------ceeEEEccccCcccccCC-------
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MP--------ICTILISQYFPTILLPCK-------  390 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~--------~~~iki~dfG~~~~~~~~-------  390 (568)
                      |..+|+|.++|+..|.|.|..+|.+..+|+.++            +|        ...|||+|||-|..+...       
T Consensus       155 ~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~  234 (604)
T KOG0592|consen  155 YAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENP  234 (604)
T ss_pred             ecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCc
Confidence            445899999999999999999999999999864            33        447899999966544211       


Q ss_pred             --CCc---eecccccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHH
Q psy6203         391 --VGQ---VINLLRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNS  464 (568)
Q Consensus       391 --~~~---~~~~~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~  464 (568)
                        .+.   ...++|||-.|.+||. ....-++++|+||||||+|+|+.|+|||.+.|..-++++|....+.+|+.+++.+
T Consensus       235 ~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~~fp~~a  314 (604)
T KOG0592|consen  235 VDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPEGFPEDA  314 (604)
T ss_pred             cCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCCCCCHHH
Confidence              111   1356999999999998 7788899999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHccCCCcCCCCCHHHHhcCcccccC
Q psy6203         465 RQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  494 (568)
Q Consensus       465 ~~li~~~L~~dp~~R~t~~~~l~hp~~~~~  494 (568)
                      +|||+++|+.||.+|+|++||.+||||...
T Consensus       315 ~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~V  344 (604)
T KOG0592|consen  315 RDLIKKLLVRDPSDRLTSQQIKAHPFFEGV  344 (604)
T ss_pred             HHHHHHHHccCccccccHHHHhhCcccccC
Confidence            999999999999999999999999999743


No 428
>KOG1163|consensus
Probab=99.93  E-value=2.3e-25  Score=202.91  Aligned_cols=241  Identities=25%  Similarity=0.350  Sum_probs=191.6

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCC-CCcceeeEEEEeCCEEEEE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISH-QHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~h-pnIv~l~~~~~~~~~~~lV   84 (568)
                      ..++|+++++||+|+||.+|+|.+..+|+.||||+-....   ..+.+..|..+.+.|++ ..|..+..+..+..+-.+|
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a---~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlV   89 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA---KHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLV   89 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC---CCcchhHHHHHHHHhccCCCCchhhhhccccccceee
Confidence            4579999999999999999999999999999999865433   33467788999998875 6788888888888888999


Q ss_pred             EeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCC---CCeEEEeecCccCCCCCC
Q psy6203          85 IEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRN---QNLKLIDFGLCAKPEGGL  160 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~---~~~kl~DFG~a~~~~~~~  160 (568)
                      |++. |.+|.++..- ...++...+..++-|++.-++|+|.++.+||||||+|+|+.-+   ..+.|+|||+|+...+..
T Consensus        90 MdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~  168 (341)
T KOG1163|consen   90 MDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIR  168 (341)
T ss_pred             eecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhcccc
Confidence            9999 8999998863 4679999999999999999999999999999999999999633   468999999998754422


Q ss_pred             cc------ccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCC---CHHHHHHHHHcCCCCCC---
Q psy6203         161 ES------QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSD---SIDQLYDKILNGKYTEP---  228 (568)
Q Consensus       161 ~~------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~---~~~~~~~~i~~~~~~~~---  228 (568)
                      ..      ......||..|++-....+... +...|+=|+|.++..+..|..||.+-   +..+-+++|.+.+...+   
T Consensus       169 t~~HIpyre~r~ltGTaRYASinAh~g~eq-SRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~  247 (341)
T KOG1163|consen  169 TRQHIPYREDRNLTGTARYASINAHLGIEQ-SRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEV  247 (341)
T ss_pred             ccccCccccCCccceeeeehhhhhhhhhhh-hhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHH
Confidence            11      1123468999999888777664 78899999999999999999999864   44556677766655433   


Q ss_pred             --CCCChHHHHHHHHccccCcCCCC
Q psy6203         229 --PWMSPNSRQIVRSMLQVEPGKRI  251 (568)
Q Consensus       229 --~~~~~~~~~li~~~L~~dP~~Rp  251 (568)
                        ...|.++.-.+.-|-..--++-|
T Consensus       248 LC~G~P~EF~myl~Y~R~L~F~E~P  272 (341)
T KOG1163|consen  248 LCKGFPAEFAMYLNYCRGLGFEEKP  272 (341)
T ss_pred             HhCCCcHHHHHHHHHHhhcCCCCCC
Confidence              23566776666666554433333


No 429
>KOG0690|consensus
Probab=99.93  E-value=1.6e-26  Score=218.53  Aligned_cols=156  Identities=22%  Similarity=0.381  Sum_probs=141.6

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc--------------------CcceeEEEccccCcccccCCCCceecc
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF--------------------MPICTILISQYFPTILLPCKVGQVINL  397 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~--------------------~~~~~iki~dfG~~~~~~~~~~~~~~~  397 (568)
                      |..||+||-++...+.|+|+.+|.+=..|++++                    .+.++|||+|||+..-. ...|..+++
T Consensus       249 yanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~-I~~g~t~kT  327 (516)
T KOG0690|consen  249 YANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEE-IKYGDTTKT  327 (516)
T ss_pred             EccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhc-ccccceecc
Confidence            667999999999999999999999999999874                    66789999999965433 245667899


Q ss_pred             cccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCc
Q psy6203         398 LRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP  476 (568)
Q Consensus       398 ~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp  476 (568)
                      +||||.|.|||+ ....|+.+||||.+||+||||++|+.||...+...++..|+.....+|..+|++++.|+.++|.+||
T Consensus       328 FCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr~ls~eAktLLsGLL~kdP  407 (516)
T KOG0690|consen  328 FCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPRTLSPEAKTLLSGLLKKDP  407 (516)
T ss_pred             ccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCccCCHHHHHHHHHHhhcCh
Confidence            999999999999 7778999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCC-----HHHHhcCcccccC
Q psy6203         477 GKRIK-----IQDLLGHNWVKMG  494 (568)
Q Consensus       477 ~~R~t-----~~~~l~hp~~~~~  494 (568)
                      .+|++     +.|+++|+||...
T Consensus       408 ~kRLGgGpdDakEi~~h~FF~~v  430 (516)
T KOG0690|consen  408 KKRLGGGPDDAKEIMRHRFFASV  430 (516)
T ss_pred             HhhcCCCchhHHHHHhhhhhccC
Confidence            99996     7899999999743


No 430
>KOG0586|consensus
Probab=99.93  E-value=2.8e-26  Score=234.90  Aligned_cols=219  Identities=24%  Similarity=0.363  Sum_probs=183.1

Q ss_pred             cCCccCCCCcc-----hhhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc--------------------CcceeEEEcc
Q psy6203         326 QGKQYYGSETD-----VWSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF--------------------MPICTILISQ  380 (568)
Q Consensus       326 ~~~~~~~~~~~-----~~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~--------------------~~~~~iki~d  380 (568)
                      |..+++.++..     .|+.|+++|+++..++...|.+++.+|.|+++++                    ...-||||+|
T Consensus       119 kl~~v~~t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaD  198 (596)
T KOG0586|consen  119 KLFSVIETEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIAD  198 (596)
T ss_pred             eeeeeeeecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeec
Confidence            33444454443     3777999999999999999999999999999975                    2233799999


Q ss_pred             ccCcccccCCCCceecccccccccccCCC--CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC
Q psy6203         381 YFPTILLPCKVGQVINLLRSAIVLCSAPS--SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP  458 (568)
Q Consensus       381 fG~~~~~~~~~~~~~~~~~gt~~~~~pe~--~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~  458 (568)
                      |||+..+.  .+....+.||++.|.|||.  +.+|.++.+|+||+|+++|.|+.|.+||.|.+...+-..++.+.+.+|.
T Consensus       199 fgfS~~~~--~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~  276 (596)
T KOG0586|consen  199 FGFSTFFD--YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPF  276 (596)
T ss_pred             cccceeec--ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccc
Confidence            99988754  6778899999999999998  7789999999999999999999999999999999999999999999999


Q ss_pred             CCCHHHHHHHHHccCCCcCCCCCHHHHhcCcccccCCCC---CCCCCC----ChHHHHHHHhccCCCHHHHHHHHHhcCC
Q psy6203         459 WMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPED---NPLREK----DDDVIKVMADHKQLSPDDMWSQLNEWTY  531 (568)
Q Consensus       459 ~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~~~  531 (568)
                      .+|.+|.+||+++|..+|.+|+++++++.|.|.......   .+....    ....-..+....++..+++.+.|.+.++
T Consensus       277 ~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~~~l~p~~e~~~~~~~~~r~~~m~~~G~~~~~i~~sL~~~k~  356 (596)
T KOG0586|consen  277 YMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEARLLAPLIERSTPFILAKRILHMNSIGHRRLKIEESLAKQKF  356 (596)
T ss_pred             eeechhHHHHHHhhccCccccCCHHHhhhhcccchhhhhhhhhcccccCccchhhHHHHHHHhhccchhhHHHHHhhhhH
Confidence            999999999999999999999999999999999855332   111111    1111112445678888999999999999


Q ss_pred             ChHHHHHHHHHhchh
Q psy6203         532 NYDTCTYLLLLSRKK  546 (568)
Q Consensus       532 ~~~~~~~~~l~~~~~  546 (568)
                      +++.++|.+|..++.
T Consensus       357 d~i~a~y~ll~~~~~  371 (596)
T KOG0586|consen  357 DDINATYLLLGYRKQ  371 (596)
T ss_pred             HHHHHHHhhcchhhh
Confidence            999999999988765


No 431
>KOG0597|consensus
Probab=99.93  E-value=4.1e-26  Score=229.90  Aligned_cols=162  Identities=22%  Similarity=0.370  Sum_probs=144.9

Q ss_pred             CCCCcchhhh----HHHHHHHHhCCCCCChhhHHHHHHHHhhcc--------------------CcceeEEEccccCccc
Q psy6203         331 YGSETDVWSM----GVMLYALLCGFLPFDSDSIDQLYDKILSHF--------------------MPICTILISQYFPTIL  386 (568)
Q Consensus       331 ~~~~~~~~~~----g~~l~~~~~~~~~~~e~~~~~~~~qil~~~--------------------~~~~~iki~dfG~~~~  386 (568)
                      |.+..+.|.+    -|+|++++...+.++|+.++.+-.++++++                    .+++.+|+||||+|+.
T Consensus        70 fEt~~~~~vVte~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~  149 (808)
T KOG0597|consen   70 FETSAHLWVVTEYAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARA  149 (808)
T ss_pred             hcccceEEEEehhhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhh
Confidence            6777776543    249999999999999999999999999874                    3455789999999987


Q ss_pred             ccCCCCceecccccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHH
Q psy6203         387 LPCKVGQVINLLRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSR  465 (568)
Q Consensus       387 ~~~~~~~~~~~~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~  465 (568)
                      ... ...+.+...|||.|||||. ....|+..+|+||+|||+|||.+|+|||...+..++...|......+|...|..+.
T Consensus       150 m~~-~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~~S~~f~  228 (808)
T KOG0597|consen  150 MST-NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPSTASSSFV  228 (808)
T ss_pred             ccc-CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcccccHHHH
Confidence            654 3446778899999999998 88899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHccCCCcCCCCCHHHHhcCccccc
Q psy6203         466 QIVRSMLQVEPGKRIKIQDLLGHNWVKM  493 (568)
Q Consensus       466 ~li~~~L~~dp~~R~t~~~~l~hp~~~~  493 (568)
                      .||+++|.+||.+|+|..+++.|||.+.
T Consensus       229 nfl~gLL~kdP~~RltW~~Ll~HpF~k~  256 (808)
T KOG0597|consen  229 NFLQGLLIKDPAQRLTWTDLLGHPFWKG  256 (808)
T ss_pred             HHHHHHhhcChhhcccHHHHhcChHHhh
Confidence            9999999999999999999999999974


No 432
>KOG0611|consensus
Probab=99.92  E-value=9.1e-26  Score=219.01  Aligned_cols=163  Identities=26%  Similarity=0.491  Sum_probs=144.4

Q ss_pred             ccCCCCcch-----hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc--------------------CcceeEEEccccC
Q psy6203         329 QYYGSETDV-----WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF--------------------MPICTILISQYFP  383 (568)
Q Consensus       329 ~~~~~~~~~-----~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~--------------------~~~~~iki~dfG~  383 (568)
                      ..|.++..|     |+-||+||+|+..++.|+|.++|.+|+||++++                    +.+|||||+|||+
T Consensus       120 EVFENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGL  199 (668)
T KOG0611|consen  120 EVFENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGL  199 (668)
T ss_pred             hhhcCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccch
Confidence            345666655     667999999999999999999999999999974                    5678999999998


Q ss_pred             cccccCCCCceecccccccccccCCC--CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Q psy6203         384 TILLPCKVGQVINLLRSAIVLCSAPS--SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMS  461 (568)
Q Consensus       384 ~~~~~~~~~~~~~~~~gt~~~~~pe~--~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s  461 (568)
                      ++...  .+..+.++||+|-|.+||.  +..|-|+.||.|||||+||.|+.|..||+|.+...+.++|..|.+..|..-|
T Consensus       200 SNly~--~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~PS  277 (668)
T KOG0611|consen  200 SNLYA--DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPETPS  277 (668)
T ss_pred             hhhhc--cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCCCc
Confidence            87753  3456889999999999998  7778899999999999999999999999999999999999999998877544


Q ss_pred             HHHHHHHHHccCCCcCCCCCHHHHhcCcccccC
Q psy6203         462 PNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  494 (568)
Q Consensus       462 ~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~  494 (568)
                       ++.-||..||..||++|.|++++.+|=|+..+
T Consensus       278 -dA~gLIRwmLmVNP~RRATieDiAsHWWvNwg  309 (668)
T KOG0611|consen  278 -DASGLIRWMLMVNPERRATIEDIASHWWVNWG  309 (668)
T ss_pred             -hHHHHHHHHHhcCcccchhHHHHhhhheeecc
Confidence             57889999999999999999999999998754


No 433
>KOG1165|consensus
Probab=99.92  E-value=1.4e-24  Score=206.46  Aligned_cols=214  Identities=23%  Similarity=0.414  Sum_probs=182.0

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCC-CCCcceeeEEEEeCCEEEEE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHIS-HQHICKLFQVIETSSHIFMV   84 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~~~lV   84 (568)
                      ..-.|+++++||+|+||.++.|.+..+++.||||.-...   ++.+.+..|....+.|. .++|..+|-+.+..-+-.||
T Consensus        26 VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk---S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLV  102 (449)
T KOG1165|consen   26 VGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK---SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILV  102 (449)
T ss_pred             ecccceeccccccCcceeeecccccccCceEEEEecccc---CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhh
Confidence            345799999999999999999999999999999986543   35668889999999886 69999999988888888999


Q ss_pred             EeccCCCChHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCC-----CeEEEeecCccCCCC
Q psy6203          85 IEYCPGGELLDHIVE-RQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQ-----NLKLIDFGLCAKPEG  158 (568)
Q Consensus        85 ~E~~~~g~L~~~i~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-----~~kl~DFG~a~~~~~  158 (568)
                      ||++ |.+|.|+..- ..+|+...+..++.|++.-++|+|++..|.|||||+|+||..-+     .|.|+|||+|+...+
T Consensus       103 idLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrD  181 (449)
T KOG1165|consen  103 IDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRD  181 (449)
T ss_pred             hhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcC
Confidence            9999 8899998864 46799999999999999999999999999999999999996443     589999999987654


Q ss_pred             CCcc------ccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCC---CCHHHHHHHHHcCC
Q psy6203         159 GLES------QLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDS---DSIDQLYDKILNGK  224 (568)
Q Consensus       159 ~~~~------~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~---~~~~~~~~~i~~~~  224 (568)
                      ....      ...+..||..||+-....|.+. +...|+=|||-++++.|-|.+||.+   .+..+-+++|-..+
T Consensus       182 p~TkqHIPYrE~KSLsGTARYMSINTHlGrEQ-SRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~K  255 (449)
T KOG1165|consen  182 PKTKQHIPYREHKSLSGTARYMSINTHLGREQ-SRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETK  255 (449)
T ss_pred             ccccccCccccccccccceeeeEeeccccchh-hhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhcccc
Confidence            4322      1234469999999999998885 8899999999999999999999976   45666677775443


No 434
>KOG0593|consensus
Probab=99.92  E-value=3.5e-25  Score=208.01  Aligned_cols=151  Identities=17%  Similarity=0.217  Sum_probs=122.5

Q ss_pred             HHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Ccc--------eeEEEccccCcccccCCCCceecccccc
Q psy6203         342 VMLYALLCGFLPFDSDSIDQLYDKILSHF------------MPI--------CTILISQYFPTILLPCKVGQVINLLRSA  401 (568)
Q Consensus       342 ~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~~--------~~iki~dfG~~~~~~~~~~~~~~~~~gt  401 (568)
                      ..|.++-+--.-.+++.++.+..|++.++            +||        +.+|+||||||+.+.. +|...++++.|
T Consensus        86 TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~-pgd~YTDYVAT  164 (396)
T KOG0593|consen   86 TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSA-PGDNYTDYVAT  164 (396)
T ss_pred             HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcC-Ccchhhhhhhh
Confidence            34444433333478888999999999864            343        3579999999988765 78888999999


Q ss_pred             cccccCCC--CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCC---------------------CCCC-
Q psy6203         402 IVLCSAPS--SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK---------------------YTEP-  457 (568)
Q Consensus       402 ~~~~~pe~--~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~---------------------~~~~-  457 (568)
                      .||.|||.  +...||.+|||||+||++.||++|.|.|+|.+..+++..|...-                     ++.| 
T Consensus       165 RWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~  244 (396)
T KOG0593|consen  165 RWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPE  244 (396)
T ss_pred             hhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCC
Confidence            99999997  77999999999999999999999999999999888876664311                     1111 


Q ss_pred             ---------CCCCHHHHHHHHHccCCCcCCCCCHHHHhcCccccc
Q psy6203         458 ---------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKM  493 (568)
Q Consensus       458 ---------~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~  493 (568)
                               +.+|.-+.||+++||..||.+|++++|++.||||..
T Consensus       245 ~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  245 HPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDG  289 (396)
T ss_pred             CccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHH
Confidence                     236778899999999999999999999999999953


No 435
>KOG0578|consensus
Probab=99.91  E-value=4.8e-25  Score=223.91  Aligned_cols=159  Identities=18%  Similarity=0.331  Sum_probs=131.6

Q ss_pred             Ccchhhh-----HHHHHHHHhCCCCCChhhHHHHHHHHhhcc--------------------CcceeEEEccccCccccc
Q psy6203         334 ETDVWSM-----GVMLYALLCGFLPFDSDSIDQLYDKILSHF--------------------MPICTILISQYFPTILLP  388 (568)
Q Consensus       334 ~~~~~~~-----g~~l~~~~~~~~~~~e~~~~~~~~qil~~~--------------------~~~~~iki~dfG~~~~~~  388 (568)
                      +.++|..     |+.|-+++.. -.+.|..|..+.+.+++|+                    ...+++||+||||+....
T Consensus       342 ~deLWVVMEym~ggsLTDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~  420 (550)
T KOG0578|consen  342 GDELWVVMEYMEGGSLTDVVTK-TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQIS  420 (550)
T ss_pred             cceeEEEEeecCCCchhhhhhc-ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccc
Confidence            3556554     6677666665 4699999999999999874                    234579999999987665


Q ss_pred             CCCCceecccccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHH-HcCCCC--CCCCCCHHH
Q psy6203         389 CKVGQVINLLRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI-LNGKYT--EPPWMSPNS  464 (568)
Q Consensus       389 ~~~~~~~~~~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i-~~~~~~--~~~~~s~~~  464 (568)
                      .... ...+.+|||+|||||+ ..+.||+++||||||+++.||+-|.|||-.+++..-+..| ..|.+.  .|..+|+.+
T Consensus       421 ~~~~-KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~  499 (550)
T KOG0578|consen  421 EEQS-KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPEL  499 (550)
T ss_pred             cccC-ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHH
Confidence            4433 5788999999999998 8889999999999999999999999999987766555444 456554  577899999


Q ss_pred             HHHHHHccCCCcCCCCCHHHHhcCcccccC
Q psy6203         465 RQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  494 (568)
Q Consensus       465 ~~li~~~L~~dp~~R~t~~~~l~hp~~~~~  494 (568)
                      +||+.+||+.|+.+|++|.|+|+||||+..
T Consensus       500 kdFL~~cL~~dv~~RasA~eLL~HpFl~~a  529 (550)
T KOG0578|consen  500 KDFLDRCLVVDVEQRASAKELLEHPFLKMA  529 (550)
T ss_pred             HHHHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence            999999999999999999999999999653


No 436
>KOG0198|consensus
Probab=99.91  E-value=9.2e-25  Score=215.20  Aligned_cols=158  Identities=16%  Similarity=0.230  Sum_probs=127.1

Q ss_pred             hhhHHHHHHHHhCCC-CCChhhHHHHHHHHhhcc------------Cc---------ceeEEEccccCcccccC--CCCc
Q psy6203         338 WSMGVMLYALLCGFL-PFDSDSIDQLYDKILSHF------------MP---------ICTILISQYFPTILLPC--KVGQ  393 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~-~~~e~~~~~~~~qil~~~------------~~---------~~~iki~dfG~~~~~~~--~~~~  393 (568)
                      |..||+|.+++.+.+ .|+|..|+.+.+||+.|+            +|         .+.+||+|||.+.....  ....
T Consensus        97 y~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~  176 (313)
T KOG0198|consen   97 YAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSD  176 (313)
T ss_pred             ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccccccc
Confidence            556899999999877 899999999999999874            22         35789999997655442  2222


Q ss_pred             eecccccccccccCCC-CC-CCCCCccceeehhHHHHHHHhCCCCCCC-CCHHHHHHHHHcCC--CCCCCCCCHHHHHHH
Q psy6203         394 VINLLRSAIVLCSAPS-SK-QYYGSETDVWSMGVMLYALLCGFLPFDS-DSIDQLYDKILNGK--YTEPPWMSPNSRQIV  468 (568)
Q Consensus       394 ~~~~~~gt~~~~~pe~-~~-~~~~~~~DiWSlG~il~eml~g~~pf~~-~~~~~~~~~i~~~~--~~~~~~~s~~~~~li  468 (568)
                      ......||+.|||||+ .. ..-+.++||||+||++.||+||++||.. ....+.+..|....  +.+|..+|+++++||
T Consensus       177 ~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl  256 (313)
T KOG0198|consen  177 SELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFL  256 (313)
T ss_pred             ccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHH
Confidence            3456899999999998 42 2333599999999999999999999987 44444445555443  568899999999999


Q ss_pred             HHccCCCcCCCCCHHHHhcCcccccCC
Q psy6203         469 RSMLQVEPGKRIKIQDLLGHNWVKMGP  495 (568)
Q Consensus       469 ~~~L~~dp~~R~t~~~~l~hp~~~~~~  495 (568)
                      .+||.+||++||||+++|+|||.....
T Consensus       257 ~~C~~~~p~~Rpta~eLL~hpf~~~~~  283 (313)
T KOG0198|consen  257 RKCFKRDPEKRPTAEELLEHPFLKQNS  283 (313)
T ss_pred             HHHhhcCcccCcCHHHHhhChhhhccc
Confidence            999999999999999999999997643


No 437
>KOG1240|consensus
Probab=99.91  E-value=5e-25  Score=237.20  Aligned_cols=241  Identities=29%  Similarity=0.375  Sum_probs=186.7

Q ss_pred             ccccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHH---HHHHHHHhCCCCCcceeeEEEEeCCEE
Q psy6203           5 DLRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVK---LEINALKHISHQHICKLFQVIETSSHI   81 (568)
Q Consensus         5 ~~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~---~Ei~~l~~l~hpnIv~l~~~~~~~~~~   81 (568)
                      ++..+|...+.||++.|=+|.+|++. .|. |+||++-+....-....+.   .|++ ...++|||++.+.-+.......
T Consensus        20 d~~~e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAA   96 (1431)
T KOG1240|consen   20 DLSVECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAA   96 (1431)
T ss_pred             cCccceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHH
Confidence            34447888999999999999999975 454 9999998766443333333   3444 5566899999998888888888


Q ss_pred             EEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccC---CCC
Q psy6203          82 FMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAK---PEG  158 (568)
Q Consensus        82 ~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~---~~~  158 (568)
                      |||-+|. ..+|+|.+..+.-+..-+.+.|+.||+.||..||..||+|||||.+|||+++-+-+.|+||..-+.   ..+
T Consensus        97 ylvRqyv-khnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD  175 (1431)
T KOG1240|consen   97 YLVRQYV-KHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED  175 (1431)
T ss_pred             HHHHHHH-hhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence            9999999 568999998888889999999999999999999999999999999999999999999999975432   111


Q ss_pred             C---CccccccccCCccccccccccCc----------ccCCcccceechhhHHHHHHh-CCCCCCC-----------CCH
Q psy6203         159 G---LESQLQTSCGSPNYAAPEVIKGK----------QYYGSETDVWSMGVMLYALLC-GFLPFDS-----------DSI  213 (568)
Q Consensus       159 ~---~~~~~~~~~gt~~y~aPE~l~~~----------~~~~~~~DiwSlG~il~~llt-G~~pf~~-----------~~~  213 (568)
                      +   ......+...-.+|.|||.+...          +..+++.||||+||+++||++ |.+||.-           .+.
T Consensus       176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~  255 (1431)
T KOG1240|consen  176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDP  255 (1431)
T ss_pred             CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCH
Confidence            1   11112223334589999987431          224678899999999999998 7899842           122


Q ss_pred             HHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCCCCHHHHhcC
Q psy6203         214 DQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQDLLGH  259 (568)
Q Consensus       214 ~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h  259 (568)
                      +.+++.|          -+..++.+|..|++.||++|.+|++.|+.
T Consensus       256 e~~Le~I----------ed~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  256 EQLLEKI----------EDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             HHHHHhC----------cCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            2333322          24578999999999999999999999974


No 438
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.90  E-value=1.2e-23  Score=196.43  Aligned_cols=140  Identities=24%  Similarity=0.294  Sum_probs=112.5

Q ss_pred             EeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC-c-------h-----------------HHHHHHHHHHHhCCCCC
Q psy6203          13 ERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE-D-------L-----------------PRVKLEINALKHISHQH   67 (568)
Q Consensus        13 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~-~-------~-----------------~~~~~Ei~~l~~l~hpn   67 (568)
                      ...||+|++|.||+|.+. +|+.||+|+++...... .       .                 .....|+.++.++.+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            468999999999999987 89999999997643211 0       0                 12245999999998887


Q ss_pred             cceeeEEEEeCCEEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHH-HHcCceecCCCCCceEEcCCCCeE
Q psy6203          68 ICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYL-HHLGYAHRDLKPENVLLDRNQNLK  146 (568)
Q Consensus        68 Iv~l~~~~~~~~~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~L-H~~~ivHrDlkp~NIll~~~~~~k  146 (568)
                      +.....+....  .+|||||++|+++.........+++..+..++.|++.+|.++ |+.||+||||||+|||++ ++.++
T Consensus        81 v~~p~~~~~~~--~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~  157 (190)
T cd05147          81 IPCPEPILLKS--HVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLY  157 (190)
T ss_pred             CCCCcEEEecC--CEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEE
Confidence            75444332222  389999999887776655567899999999999999999999 799999999999999998 57899


Q ss_pred             EEeecCccCC
Q psy6203         147 LIDFGLCAKP  156 (568)
Q Consensus       147 l~DFG~a~~~  156 (568)
                      |+|||+|...
T Consensus       158 LiDFG~a~~~  167 (190)
T cd05147         158 IIDVSQSVEH  167 (190)
T ss_pred             EEEccccccC
Confidence            9999998753


No 439
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.90  E-value=9.3e-24  Score=199.45  Aligned_cols=172  Identities=19%  Similarity=0.212  Sum_probs=133.1

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCc--hH------HHHHHHHHHHhCCCCCcceeeEEEEe
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED--LP------RVKLEINALKHISHQHICKLFQVIET   77 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~--~~------~~~~Ei~~l~~l~hpnIv~l~~~~~~   77 (568)
                      +.++|++.+.||.|+||.||++..  ++..+|+|++........  ..      .+++|+..+.++.||+|..+.+++..
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~  106 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL  106 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence            578999999999999999999765  467899999975543221  11      26789999999999999999988654


Q ss_pred             C--------CEEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEe
Q psy6203          78 S--------SHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLID  149 (568)
Q Consensus        78 ~--------~~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~D  149 (568)
                      .        +..+|||||++|.+|.+..    .+++    ....+++.+|..||+.|++|||+||+||+++.+| ++|+|
T Consensus       107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~----~~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liD  177 (232)
T PRK10359        107 AERKTLRYAHTYIMLIEYIEGVELNDMP----EISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIID  177 (232)
T ss_pred             cccccccccCCeEEEEEEECCccHHHhh----hccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEE
Confidence            3        3579999999999998763    2333    2456999999999999999999999999999988 99999


Q ss_pred             ecCccCCCCCCccccccccCCccccccccccCcccCCcccceechhhHHHHHH
Q psy6203         150 FGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALL  202 (568)
Q Consensus       150 FG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~ll  202 (568)
                      ||.+........             ...++.... ++.++|+||||+++..+.
T Consensus       178 fg~~~~~~e~~a-------------~d~~vler~-y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        178 LSGKRCTAQRKA-------------KDRIDLERH-YGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             CCCcccccchhh-------------HHHHHHHhH-hcccccccceeEeehHHH
Confidence            998654422110             011333344 467899999999987654


No 440
>KOG0663|consensus
Probab=99.90  E-value=8.2e-24  Score=201.42  Aligned_cols=153  Identities=22%  Similarity=0.296  Sum_probs=123.6

Q ss_pred             HHHHHHhCC-CCCChhhHHHHHHHHhhcc------------Ccc--------eeEEEccccCcccccCCCCceecccccc
Q psy6203         343 MLYALLCGF-LPFDSDSIDQLYDKILSHF------------MPI--------CTILISQYFPTILLPCKVGQVINLLRSA  401 (568)
Q Consensus       343 ~l~~~~~~~-~~~~e~~~~~~~~qil~~~------------~~~--------~~iki~dfG~~~~~~~~~~~~~~~~~gt  401 (568)
                      +|..++... .+|...+++.++.|+|+|+            +|+        +.+||+|||+|+.... +-...+..+.|
T Consensus       162 DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs-p~k~~T~lVVT  240 (419)
T KOG0663|consen  162 DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGS-PLKPYTPLVVT  240 (419)
T ss_pred             hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcC-CcccCcceEEE
Confidence            344555553 4999999999999999874            333        4689999998877543 22335667999


Q ss_pred             cccccCCC--CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCC-----------------CCC---
Q psy6203         402 IVLCSAPS--SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN--GKY-----------------TEP---  457 (568)
Q Consensus       402 ~~~~~pe~--~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~--~~~-----------------~~~---  457 (568)
                      .||.|||.  +.+.|++++|+||+|||++||++++|.|+|.+..+++.+|..  |.+                 .++   
T Consensus       241 LWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~p  320 (419)
T KOG0663|consen  241 LWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHP  320 (419)
T ss_pred             eeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCC
Confidence            99999997  888999999999999999999999999999999998888865  111                 111   


Q ss_pred             ---------CC-CCHHHHHHHHHccCCCcCCCCCHHHHhcCcccccCCC
Q psy6203         458 ---------PW-MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPE  496 (568)
Q Consensus       458 ---------~~-~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~  496 (568)
                               .. +|..+.+|+.++|..||.+|+||+|+|+|.||.+.+.
T Consensus       321 yn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P~  369 (419)
T KOG0663|consen  321 YNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRETPL  369 (419)
T ss_pred             chhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcccccccCCC
Confidence                     11 4688999999999999999999999999999987543


No 441
>KOG0606|consensus
Probab=99.90  E-value=2.8e-24  Score=231.40  Aligned_cols=219  Identities=30%  Similarity=0.562  Sum_probs=173.7

Q ss_pred             cccCeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEE
Q psy6203           6 LRNQYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHISHQHICKLFQVIETSSHIFMVI   85 (568)
Q Consensus         6 ~~~~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~   85 (568)
                      ..++|..++.|..|+||-||+++|+.+.+.+|+|+ ++.+.     .+++   ++..-..|.+|                
T Consensus        81 ~e~df~~IklisngAygavylvrh~~trqrfa~ki-Nkq~l-----ilRn---ilt~a~npfvv----------------  135 (1205)
T KOG0606|consen   81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKI-NKQNL-----ILRN---ILTFAGNPFVV----------------  135 (1205)
T ss_pred             CccccceeEeeccCCCCceeeeeccccccchhhcc-cccch-----hhhc---cccccCCccee----------------
Confidence            35689999999999999999999999999999954 33221     0111   23333444444                


Q ss_pred             eccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCCCCCceEEcCCCCeEEEeecCccCCCCCC-----
Q psy6203          86 EYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDLKPENVLLDRNQNLKLIDFGLCAKPEGGL-----  160 (568)
Q Consensus        86 E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-----  160 (568)
                           |+-...++.-++++.+.        +.|++|||+.||+|||+||+|++|+.-|.+|++|||+++......     
T Consensus       136 -----gDc~tllk~~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~  202 (1205)
T KOG0606|consen  136 -----GDCATLLKNIGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLK  202 (1205)
T ss_pred             -----chhhhhcccCCCCcchh--------hHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhh
Confidence                 55566666556666554        789999999999999999999999999999999999976432111     


Q ss_pred             ---------ccccccccCCccccccccccCcccCCcccceechhhHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC--
Q psy6203         161 ---------ESQLQTSCGSPNYAAPEVIKGKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP--  229 (568)
Q Consensus       161 ---------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i~~~~~~~~~--  229 (568)
                               .-.....||||.|+|||++.... |+..+|.|++|+|+|+.+.|..||.+++.++++..+.......++  
T Consensus       203 eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqg-ygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~d  281 (1205)
T KOG0606|consen  203 EGHIEKDTHEFQDKQVCGTPEYIAPEVILRQG-YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEED  281 (1205)
T ss_pred             hcchHHHHHHhhhccccCCccccChhhhhhhc-cCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccC
Confidence                     01123358999999999998766 699999999999999999999999999999999988776554433  


Q ss_pred             -CCChHHHHHHHHccccCcCCCC---CHHHHhcCcccc
Q psy6203         230 -WMSPNSRQIVRSMLQVEPGKRI---KIQDLLGHNWVK  263 (568)
Q Consensus       230 -~~~~~~~~li~~~L~~dP~~Rp---s~~ell~hp~~~  263 (568)
                       .++++++++|.++|+.+|..|.   .+-++.+|+||+
T Consensus       282 ea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~  319 (1205)
T KOG0606|consen  282 EALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQ  319 (1205)
T ss_pred             cCCCHHHHHHHHHHHHhChHhhcccchhhhhhhcccee
Confidence             4789999999999999999996   577888999996


No 442
>KOG0659|consensus
Probab=99.90  E-value=1.1e-23  Score=194.92  Aligned_cols=156  Identities=19%  Similarity=0.229  Sum_probs=125.1

Q ss_pred             HHHHHHHHhC-CCCCChhhHHHHHHHHhhcc------------Cccee--------EEEccccCcccccCCCCceecccc
Q psy6203         341 GVMLYALLCG-FLPFDSDSIDQLYDKILSHF------------MPICT--------ILISQYFPTILLPCKVGQVINLLR  399 (568)
Q Consensus       341 g~~l~~~~~~-~~~~~e~~~~~~~~qil~~~------------~~~~~--------iki~dfG~~~~~~~~~~~~~~~~~  399 (568)
                      -.+|..+++. ...|+..+++.++.++++|+            +||.|        +||+|||+|+....... .....+
T Consensus        84 ~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~-~~~~~V  162 (318)
T KOG0659|consen   84 PTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR-IQTHQV  162 (318)
T ss_pred             cccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCc-ccccce
Confidence            3566667775 56889999999999988864            55554        68899998887654332 233348


Q ss_pred             cccccccCCC--CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCC---CC---------------
Q psy6203         400 SAIVLCSAPS--SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--KYT---EP---------------  457 (568)
Q Consensus       400 gt~~~~~pe~--~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~--~~~---~~---------------  457 (568)
                      .|.||.|||.  +.+.|+..|||||+|||++||+.|.|-|+|+++.+++..|...  .+.   +|               
T Consensus       163 ~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P  242 (318)
T KOG0659|consen  163 VTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFP  242 (318)
T ss_pred             eeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCC
Confidence            8999999997  8899999999999999999999999999999999998888652  211   11               


Q ss_pred             --------CCCCHHHHHHHHHccCCCcCCCCCHHHHhcCcccccCCCC
Q psy6203         458 --------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPED  497 (568)
Q Consensus       458 --------~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~  497 (568)
                              +..|+++.||+.+||.+||.+|+|+.|+++|+||+..+.+
T Consensus       243 ~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~~~P~p  290 (318)
T KOG0659|consen  243 KPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFKSLPLP  290 (318)
T ss_pred             CCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhhcCCCC
Confidence                    1257888999999999999999999999999999975443


No 443
>KOG0032|consensus
Probab=99.90  E-value=3.6e-23  Score=211.88  Aligned_cols=151  Identities=23%  Similarity=0.437  Sum_probs=133.3

Q ss_pred             HHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Cc------------ceeEEEccccCcccccCCCCceec
Q psy6203         341 GVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MP------------ICTILISQYFPTILLPCKVGQVIN  396 (568)
Q Consensus       341 g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~------------~~~iki~dfG~~~~~~~~~~~~~~  396 (568)
                      ||+||+.+... .|+|.++..++.|+++++            ++            ...||++|||++....  .+....
T Consensus       120 GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~--~~~~~~  196 (382)
T KOG0032|consen  120 GGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIK--PGERLH  196 (382)
T ss_pred             CchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEcc--CCceEe
Confidence            89999998876 599999999999999874            11            2369999999776543  366788


Q ss_pred             ccccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHc
Q psy6203         397 LLRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEP----PWMSPNSRQIVRSM  471 (568)
Q Consensus       397 ~~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~s~~~~~li~~~  471 (568)
                      +.|||+.|+|||+ ....|+..+||||+||++|.|++|.+||.+.+......+|..+.+.++    +.+|..+++||.+|
T Consensus       197 ~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~l  276 (382)
T KOG0032|consen  197 TIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKL  276 (382)
T ss_pred             eecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHh
Confidence            9999999999999 668999999999999999999999999999999999999999987653    33799999999999


Q ss_pred             cCCCcCCCCCHHHHhcCcccccC
Q psy6203         472 LQVEPGKRIKIQDLLGHNWVKMG  494 (568)
Q Consensus       472 L~~dp~~R~t~~~~l~hp~~~~~  494 (568)
                      |..||.+|+|+.++|+|||++..
T Consensus       277 l~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  277 LEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             cccCcccCCCHHHHhcCccccCC
Confidence            99999999999999999999865


No 444
>KOG0600|consensus
Probab=99.89  E-value=2.4e-23  Score=208.33  Aligned_cols=144  Identities=16%  Similarity=0.220  Sum_probs=122.9

Q ss_pred             CCCCChhhHHHHHHHHhhcc--------------------CcceeEEEccccCcccccCCCCceecccccccccccCCC-
Q psy6203         351 FLPFDSDSIDQLYDKILSHF--------------------MPICTILISQYFPTILLPCKVGQVINLLRSAIVLCSAPS-  409 (568)
Q Consensus       351 ~~~~~e~~~~~~~~qil~~~--------------------~~~~~iki~dfG~~~~~~~~~~~~~~~~~gt~~~~~pe~-  409 (568)
                      ...|+|..|+-+|.|+++|+                    +..+++||+|||+|+..........+..+.|.||.+||. 
T Consensus       212 ~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELL  291 (560)
T KOG0600|consen  212 GVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELL  291 (560)
T ss_pred             CcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEEeeccChHHh
Confidence            45899999999999999975                    234578999999998766666556778899999999997 


Q ss_pred             -CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCC--------CC-------------------CC
Q psy6203         410 -SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN--GKYT--------EP-------------------PW  459 (568)
Q Consensus       410 -~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~--~~~~--------~~-------------------~~  459 (568)
                       +...|+.+||+||+||||.||++|+|.|.|.+..+++.+|.+  |.+.        .|                   ..
T Consensus       292 LG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~  371 (560)
T KOG0600|consen  292 LGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKD  371 (560)
T ss_pred             cCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhcc
Confidence             889999999999999999999999999999999999988865  2111        11                   12


Q ss_pred             CCHHHHHHHHHccCCCcCCCCCHHHHhcCcccccC
Q psy6203         460 MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  494 (568)
Q Consensus       460 ~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~  494 (568)
                      +++.+.+|+..||..||++|.||.++|+|+||...
T Consensus       372 ~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF~t~  406 (560)
T KOG0600|consen  372 FPASALDLLEKLLSLDPDKRGTASSALQSEYFTTE  406 (560)
T ss_pred             CCHHHHHHHHHHhccCccccccHHHHhcCcccccC
Confidence            68899999999999999999999999999999644


No 445
>KOG0591|consensus
Probab=99.89  E-value=3.1e-23  Score=193.12  Aligned_cols=141  Identities=18%  Similarity=0.300  Sum_probs=121.2

Q ss_pred             HHHHHHHHh----CCCCCChhhHHHHHHHHhhcc----------------Ccce--------eEEEccccCcccccCCCC
Q psy6203         341 GVMLYALLC----GFLPFDSDSIDQLYDKILSHF----------------MPIC--------TILISQYFPTILLPCKVG  392 (568)
Q Consensus       341 g~~l~~~~~----~~~~~~e~~~~~~~~qil~~~----------------~~~~--------~iki~dfG~~~~~~~~~~  392 (568)
                      +|+|-+++.    ....|+|..+-++|.|++.++                +||+        ++|+.|||+++.+..+..
T Consensus       104 ~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~t  183 (375)
T KOG0591|consen  104 AGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKTT  183 (375)
T ss_pred             ccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchhH
Confidence            355555544    467899999999999999864                3443        679999998887765443


Q ss_pred             ceecccccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-CC-CCCCHHHHHHHH
Q psy6203         393 QVINLLRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EP-PWMSPNSRQIVR  469 (568)
Q Consensus       393 ~~~~~~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~-~~-~~~s~~~~~li~  469 (568)
                       ...+.+|||+||+||. ...+|+.++||||+||++|||+.-++||.|++..++..+|..|.++ .| ...|.+...||.
T Consensus       184 -fA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~~YS~~l~~li~  262 (375)
T KOG0591|consen  184 -FAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDEHYSTDLRELIN  262 (375)
T ss_pred             -HHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHHHhhhHHHHHHH
Confidence             4678999999999998 8889999999999999999999999999999999999999999886 56 568999999999


Q ss_pred             HccCCCcCCCCCH
Q psy6203         470 SMLQVEPGKRIKI  482 (568)
Q Consensus       470 ~~L~~dp~~R~t~  482 (568)
                      .|+..||+.||+.
T Consensus       263 ~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  263 MCIAVDPEQRPDT  275 (375)
T ss_pred             HHccCCcccCCCc
Confidence            9999999999984


No 446
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.89  E-value=1.5e-22  Score=189.67  Aligned_cols=142  Identities=21%  Similarity=0.293  Sum_probs=114.8

Q ss_pred             EEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCC--------------------c-----hHHHHHHHHHHHhCCCC
Q psy6203          12 LERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGE--------------------D-----LPRVKLEINALKHISHQ   66 (568)
Q Consensus        12 i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--------------------~-----~~~~~~Ei~~l~~l~hp   66 (568)
                      +.+.||+|++|.||+|.+. +|+.||||+++......                    .     .....+|...+.++.|+
T Consensus         1 ~~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   79 (190)
T cd05145           1 INGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA   79 (190)
T ss_pred             CCceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            3578999999999999987 89999999998653110                    0     11235789999999999


Q ss_pred             CcceeeEEEEeCCEEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-cCceecCCCCCceEEcCCCCe
Q psy6203          67 HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHH-LGYAHRDLKPENVLLDRNQNL  145 (568)
Q Consensus        67 nIv~l~~~~~~~~~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~-~~ivHrDlkp~NIll~~~~~~  145 (568)
                      +|.....+....  .|+||||++|+++.........+++..+..++.|++.+|.++|+ .||+||||||+||+++ ++.+
T Consensus        80 ~i~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~  156 (190)
T cd05145          80 GVPVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKP  156 (190)
T ss_pred             CCCCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCE
Confidence            885554443333  38999999888665544455678899999999999999999999 9999999999999998 8899


Q ss_pred             EEEeecCccCCC
Q psy6203         146 KLIDFGLCAKPE  157 (568)
Q Consensus       146 kl~DFG~a~~~~  157 (568)
                      +|+|||++....
T Consensus       157 ~liDFG~a~~~~  168 (190)
T cd05145         157 YIIDVSQAVELD  168 (190)
T ss_pred             EEEEcccceecC
Confidence            999999987654


No 447
>KOG0201|consensus
Probab=99.89  E-value=2.3e-24  Score=212.40  Aligned_cols=154  Identities=18%  Similarity=0.184  Sum_probs=128.3

Q ss_pred             hhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Cc--------ceeEEEccccCcccccCCCCceeccc
Q psy6203         339 SMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MP--------ICTILISQYFPTILLPCKVGQVINLL  398 (568)
Q Consensus       339 ~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~--------~~~iki~dfG~~~~~~~~~~~~~~~~  398 (568)
                      ..||.+.++++....+.|.++..+++.++.++            ++        .+++|++|||.+..+..+.. ...++
T Consensus        93 ~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~-rr~tf  171 (467)
T KOG0201|consen   93 CGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK-RRKTF  171 (467)
T ss_pred             hcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhh-ccccc
Confidence            34788888888877889999999999999874            22        24789999997655443332 35889


Q ss_pred             ccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCC-CCCCCCHHHHHHHHHccCCCc
Q psy6203         399 RSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYT-EPPWMSPNSRQIVRSMLQVEP  476 (568)
Q Consensus       399 ~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~s~~~~~li~~~L~~dp  476 (568)
                      +|||+|||||+ ...+|+.++||||||++.+||++|.|||....+..++..|-+..++ ....+|+.+++|+..||.+||
T Consensus       172 vGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L~~~~S~~~kEFV~~CL~k~P  251 (467)
T KOG0201|consen  172 VGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRLDGDFSPPFKEFVEACLDKNP  251 (467)
T ss_pred             cccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCccccccCHHHHHHHHHHhhcCc
Confidence            99999999999 7789999999999999999999999999998876666556554443 344689999999999999999


Q ss_pred             CCCCCHHHHhcCccccc
Q psy6203         477 GKRIKIQDLLGHNWVKM  493 (568)
Q Consensus       477 ~~R~t~~~~l~hp~~~~  493 (568)
                      +.||+|.++++|+|++.
T Consensus       252 ~~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  252 EFRPSAKELLKHKFIKR  268 (467)
T ss_pred             ccCcCHHHHhhhHHHHh
Confidence            99999999999999986


No 448
>KOG0610|consensus
Probab=99.89  E-value=3.2e-23  Score=202.88  Aligned_cols=157  Identities=19%  Similarity=0.286  Sum_probs=129.6

Q ss_pred             hhhHHHHHHHHhC--CCCCChhhHHHHHHHHhhcc------------CcceeEEE--------ccccCcccc--------
Q psy6203         338 WSMGVMLYALLCG--FLPFDSDSIDQLYDKILSHF------------MPICTILI--------SQYFPTILL--------  387 (568)
Q Consensus       338 ~~~g~~l~~~~~~--~~~~~e~~~~~~~~qil~~~------------~~~~~iki--------~dfG~~~~~--------  387 (568)
                      |-+||+|+.++..  .+.|+|+.||.+...++-|+            +||.||+|        +||-++...        
T Consensus       158 yCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~  237 (459)
T KOG0610|consen  158 YCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVK  237 (459)
T ss_pred             cCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeec
Confidence            4458999988876  56899999999999999764            67766555        455432110        


Q ss_pred             ---------------------------c--------------------CCCCceecccccccccccCCC-CCCCCCCccc
Q psy6203         388 ---------------------------P--------------------CKVGQVINLLRSAIVLCSAPS-SKQYYGSETD  419 (568)
Q Consensus       388 ---------------------------~--------------------~~~~~~~~~~~gt~~~~~pe~-~~~~~~~~~D  419 (568)
                                                 .                    ...+...+.++||-.|.|||+ .+.+++.+||
T Consensus       238 s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVD  317 (459)
T KOG0610|consen  238 SSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVD  317 (459)
T ss_pred             cCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCCchhh
Confidence                                       0                    000112345899999999999 9999999999


Q ss_pred             eeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHccCCCcCCCCC----HHHHhcCccccc
Q psy6203         420 VWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP--WMSPNSRQIVRSMLQVEPGKRIK----IQDLLGHNWVKM  493 (568)
Q Consensus       420 iWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~--~~s~~~~~li~~~L~~dp~~R~t----~~~~l~hp~~~~  493 (568)
                      ||+|||.+|||+.|..||.|.+..+.+.+|+...+.+|.  .+|..++|||+++|++||.+|++    |.||.+||||+.
T Consensus       318 WWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~g  397 (459)
T KOG0610|consen  318 WWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEG  397 (459)
T ss_pred             HHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccC
Confidence            999999999999999999999999999999999888775  47899999999999999999998    999999999985


Q ss_pred             C
Q psy6203         494 G  494 (568)
Q Consensus       494 ~  494 (568)
                      .
T Consensus       398 V  398 (459)
T KOG0610|consen  398 V  398 (459)
T ss_pred             C
Confidence            4


No 449
>KOG0696|consensus
Probab=99.88  E-value=3.9e-23  Score=201.25  Aligned_cols=156  Identities=22%  Similarity=0.295  Sum_probs=136.0

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc--------------------CcceeEEEccccCcccccCCCCceecc
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF--------------------MPICTILISQYFPTILLPCKVGQVINL  397 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~--------------------~~~~~iki~dfG~~~~~~~~~~~~~~~  397 (568)
                      |..||+|+-.+..-|.|.|..|..+...|.-++                    ...++|||+|||.+.-... .+..+++
T Consensus       431 yvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~-~~~TTkT  509 (683)
T KOG0696|consen  431 YVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF-DGVTTKT  509 (683)
T ss_pred             EecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeeccccccccc-CCcceee
Confidence            455999988888889999999988877776553                    3456899999996433222 3445789


Q ss_pred             cccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCc
Q psy6203         398 LRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP  476 (568)
Q Consensus       398 ~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp  476 (568)
                      +||||.|+|||. ....|+.++||||+||+||||+.|++||.|++..++++.|.......|..+|.++.++++++|.+.|
T Consensus       510 FCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslSkEAv~ickg~ltK~P  589 (683)
T KOG0696|consen  510 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLSKEAVAICKGLLTKHP  589 (683)
T ss_pred             ecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcccccHHHHHHHHHHhhcCC
Confidence            999999999998 8899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCH-----HHHhcCcccccC
Q psy6203         477 GKRIKI-----QDLLGHNWVKMG  494 (568)
Q Consensus       477 ~~R~t~-----~~~l~hp~~~~~  494 (568)
                      .+|+++     .++..||||...
T Consensus       590 ~kRLGcg~~ge~di~~H~FFR~i  612 (683)
T KOG0696|consen  590 GKRLGCGPEGERDIREHPFFRRI  612 (683)
T ss_pred             ccccCCCCccccchhhCcchhhc
Confidence            999974     689999999743


No 450
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.88  E-value=7.5e-23  Score=208.66  Aligned_cols=156  Identities=21%  Similarity=0.394  Sum_probs=133.1

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Ccc--------eeEEEccccCcccccCCCCceecc
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MPI--------CTILISQYFPTILLPCKVGQVINL  397 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~~--------~~iki~dfG~~~~~~~~~~~~~~~  397 (568)
                      |..|++|++++...+.+++..++.++.|++.++            +++        +.+||+|||++..... .+.....
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~-~~~~~~~  154 (323)
T cd05571          76 YANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGIS-DGATMKT  154 (323)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCccccc-CCCcccc
Confidence            334788999998888999999999999999864            333        3578999997654322 2333456


Q ss_pred             cccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCc
Q psy6203         398 LRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP  476 (568)
Q Consensus       398 ~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp  476 (568)
                      .+||+.|+|||. .+..|+.++||||+||++|||++|++||.+.+.......+..+...+|..+++++.+||.+||..||
T Consensus       155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP  234 (323)
T cd05571         155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLAGLLKKDP  234 (323)
T ss_pred             eecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCH
Confidence            789999999998 6778999999999999999999999999999888888888888888999999999999999999999


Q ss_pred             CCCC-----CHHHHhcCcccccC
Q psy6203         477 GKRI-----KIQDLLGHNWVKMG  494 (568)
Q Consensus       477 ~~R~-----t~~~~l~hp~~~~~  494 (568)
                      ++|+     ++.++++||||...
T Consensus       235 ~~R~~~~~~~~~~ll~h~~f~~~  257 (323)
T cd05571         235 KQRLGGGPEDAKEIMEHRFFASI  257 (323)
T ss_pred             HHcCCCCCCCHHHHHcCCCcCCC
Confidence            9999     89999999999753


No 451
>PF14531 Kinase-like:  Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.88  E-value=1e-22  Score=198.04  Aligned_cols=233  Identities=27%  Similarity=0.412  Sum_probs=151.6

Q ss_pred             CeEEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcC--CchHHHHHHHHHHHhCCC----------CCcceeeEEEE
Q psy6203           9 QYILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLG--EDLPRVKLEINALKHISH----------QHICKLFQVIE   76 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~Ei~~l~~l~h----------pnIv~l~~~~~   76 (568)
                      ....++.||.|+++.||.+++..||+.+|+|++......  ...+.+++|.-....+.+          -.++-.++...
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~   92 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR   92 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence            456678999999999999999999999999988654422  345666766655444322          12222233321


Q ss_pred             ---------eC---C-----EEEEEEeccCCCChHHHHHh---cCCC----CHHHHHHHHHHHHHHHHHHHHcCceecCC
Q psy6203          77 ---------TS---S-----HIFMVIEYCPGGELLDHIVE---RQRL----GEKESRAFFRQILSAVAYLHHLGYAHRDL  132 (568)
Q Consensus        77 ---------~~---~-----~~~lV~E~~~~g~L~~~i~~---~~~l----~~~~~~~i~~qi~~aL~~LH~~~ivHrDl  132 (568)
                               ..   +     +.+++|+-+ .++|.+++..   ....    .......+..|+++.+++||+.|++|+||
T Consensus        93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi  171 (288)
T PF14531_consen   93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDI  171 (288)
T ss_dssp             ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-
T ss_pred             EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEeccc
Confidence                     11   1     236788887 6788877642   2222    12222456699999999999999999999


Q ss_pred             CCCceEEcCCCCeEEEeecCccCCCCCCccccccccCCccccccccccCc-------ccCCcccceechhhHHHHHHhCC
Q psy6203         133 KPENVLLDRNQNLKLIDFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGK-------QYYGSETDVWSMGVMLYALLCGF  205 (568)
Q Consensus       133 kp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-------~~~~~~~DiwSlG~il~~lltG~  205 (568)
                      +|+|++++.+|.+.|+||+........    ......+..|.+||.....       ..++.+.|.|+||+++|.|++|.
T Consensus       172 ~~~nfll~~~G~v~Lg~F~~~~r~g~~----~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~  247 (288)
T PF14531_consen  172 KPENFLLDQDGGVFLGDFSSLVRAGTR----YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGR  247 (288)
T ss_dssp             SGGGEEE-TTS-EEE--GGGEEETTEE----EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS
T ss_pred             ceeeEEEcCCCCEEEcChHHHeecCce----eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHcc
Confidence            999999999999999999977654432    1113356789999986432       23578899999999999999999


Q ss_pred             CCCCCCCHHHHHHHHHcCCCCCCCCCChHHHHHHHHccccCcCCC
Q psy6203         206 LPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGKR  250 (568)
Q Consensus       206 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  250 (568)
                      .||...........    .+.....++..++.||..+|+.||.+|
T Consensus       248 lPf~~~~~~~~~~~----~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  248 LPFGLSSPEADPEW----DFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             -STCCCGGGSTSGG----GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             CCCCCCCccccccc----cchhcCCcCHHHHHHHHHHccCCcccC
Confidence            99976543221111    223333688999999999999999988


No 452
>KOG0580|consensus
Probab=99.88  E-value=5.5e-23  Score=187.61  Aligned_cols=153  Identities=19%  Similarity=0.352  Sum_probs=136.1

Q ss_pred             hhhHHHHHHHHh--CCCCCChhhHHHHHHHHhhcc------------Ccc--------eeEEEccccCcccccCCCCcee
Q psy6203         338 WSMGVMLYALLC--GFLPFDSDSIDQLYDKILSHF------------MPI--------CTILISQYFPTILLPCKVGQVI  395 (568)
Q Consensus       338 ~~~g~~l~~~~~--~~~~~~e~~~~~~~~qil~~~------------~~~--------~~iki~dfG~~~~~~~~~~~~~  395 (568)
                      |+.++++|..+.  ...+|.|..+..+..|+..++            ++|        +.+||+|||.+....   ....
T Consensus       103 ya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p---~~kR  179 (281)
T KOG0580|consen  103 YAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SNKR  179 (281)
T ss_pred             ecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC---CCCc
Confidence            344688888888  567899999999999998874            333        368999999665533   3457


Q ss_pred             cccccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCC
Q psy6203         396 NLLRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQV  474 (568)
Q Consensus       396 ~~~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~  474 (568)
                      .+.|||.-|.+||. .+..++..||+|++|++.||++.|.+||.+.+..+++++|.+..+.+|..+|.+++|||.+||.+
T Consensus       180 ~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p~~is~~a~dlI~~ll~~  259 (281)
T KOG0580|consen  180 KTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFPSTISGGAADLISRLLVK  259 (281)
T ss_pred             eeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCCcccChhHHHHHHHHhcc
Confidence            89999999999997 88899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CcCCCCCHHHHhcCccccc
Q psy6203         475 EPGKRIKIQDLLGHNWVKM  493 (568)
Q Consensus       475 dp~~R~t~~~~l~hp~~~~  493 (568)
                      +|.+|.+..|++.|||+..
T Consensus       260 ~p~~r~~l~~v~~hpwI~a  278 (281)
T KOG0580|consen  260 NPIERLALTEVMDHPWIVA  278 (281)
T ss_pred             CccccccHHHHhhhHHHHh
Confidence            9999999999999999864


No 453
>KOG0614|consensus
Probab=99.88  E-value=2.9e-23  Score=206.99  Aligned_cols=151  Identities=19%  Similarity=0.334  Sum_probs=137.8

Q ss_pred             HHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Ccce--------eEEEccccCcccccCCCCceeccccc
Q psy6203         341 GVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MPIC--------TILISQYFPTILLPCKVGQVINLLRS  400 (568)
Q Consensus       341 g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~~~--------~iki~dfG~~~~~~~~~~~~~~~~~g  400 (568)
                      ||+|+..++.++.|.+..++.+...++.+|            +||.        -+|+.|||||...  ..|..+.++||
T Consensus       504 GGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki--~~g~KTwTFcG  581 (732)
T KOG0614|consen  504 GGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKI--GSGRKTWTFCG  581 (732)
T ss_pred             CchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHh--ccCCceeeecC
Confidence            899999999999999999999999999875            4444        4689999987653  46677889999


Q ss_pred             ccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHccCCCcC
Q psy6203         401 AIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--KYTEPPWMSPNSRQIVRSMLQVEPG  477 (568)
Q Consensus       401 t~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~s~~~~~li~~~L~~dp~  477 (568)
                      ||.|.|||. ..++++.+||.||||+++|||++|.|||.+.++...++.|++|  ...+|..++..+.+||+++...+|.
T Consensus       582 TpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~  661 (732)
T KOG0614|consen  582 TPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPT  661 (732)
T ss_pred             CcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcH
Confidence            999999998 8899999999999999999999999999999999999999998  4668999999999999999999999


Q ss_pred             CCCC-----HHHHhcCccccc
Q psy6203         478 KRIK-----IQDLLGHNWVKM  493 (568)
Q Consensus       478 ~R~t-----~~~~l~hp~~~~  493 (568)
                      +|++     +.+|.+|.||..
T Consensus       662 ERLG~~~~gI~DIkkH~Wf~g  682 (732)
T KOG0614|consen  662 ERLGYQKGGINDIKKHRWFEG  682 (732)
T ss_pred             hhhccccCChHHHHhhhhhhc
Confidence            9996     899999999974


No 454
>KOG0595|consensus
Probab=99.88  E-value=4.6e-23  Score=201.72  Aligned_cols=153  Identities=23%  Similarity=0.376  Sum_probs=136.1

Q ss_pred             HHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Ccc--------------eeEEEccccCcccccCCCCce
Q psy6203         341 GVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MPI--------------CTILISQYFPTILLPCKVGQV  394 (568)
Q Consensus       341 g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~~--------------~~iki~dfG~~~~~~~~~~~~  394 (568)
                      ||+|-+|++.++.++|+.++.+|+||-+|+            +||              -.+||+|||||+.+  .++..
T Consensus        93 gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L--~~~~~  170 (429)
T KOG0595|consen   93 GGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFL--QPGSM  170 (429)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhC--CchhH
Confidence            899999999999999999999999999874            333              24799999998875  47778


Q ss_pred             ecccccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC---CCCCCCCHHHHHHHHH
Q psy6203         395 INLLRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKY---TEPPWMSPNSRQIVRS  470 (568)
Q Consensus       395 ~~~~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~---~~~~~~s~~~~~li~~  470 (568)
                      ..+.||+|.|||||+ ....|+.|+|+||+|+|+|+|++|++||...+..+++..+..+..   .+|...++...+|+..
T Consensus       171 a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~  250 (429)
T KOG0595|consen  171 AETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLIS  250 (429)
T ss_pred             HHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhH
Confidence            899999999999999 678899999999999999999999999999999999998887754   3466788899999999


Q ss_pred             ccCCCcCCCCCHHHHhcCcccccCC
Q psy6203         471 MLQVEPGKRIKIQDLLGHNWVKMGP  495 (568)
Q Consensus       471 ~L~~dp~~R~t~~~~l~hp~~~~~~  495 (568)
                      +|+.+|..|.+..+...|++....+
T Consensus       251 ll~~~~~~~~~~~~~~~~~~l~~~p  275 (429)
T KOG0595|consen  251 LLQRNPKDRISFEDFFDHPFLAANP  275 (429)
T ss_pred             HHhcCccccCchHHhhhhhhcccCc
Confidence            9999999999999999999987544


No 455
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.88  E-value=1.4e-22  Score=207.14  Aligned_cols=151  Identities=23%  Similarity=0.414  Sum_probs=130.1

Q ss_pred             hhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Cc--------ceeEEEccccCcccccCCCCceeccc
Q psy6203         339 SMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MP--------ICTILISQYFPTILLPCKVGQVINLL  398 (568)
Q Consensus       339 ~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~--------~~~iki~dfG~~~~~~~~~~~~~~~~  398 (568)
                      ..|++|.+++...+.++++.++.++.|++.++            ++        .+++||+|||++.....    ...+.
T Consensus       100 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~----~~~~~  175 (329)
T PTZ00263        100 VVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD----RTFTL  175 (329)
T ss_pred             CCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCC----Cccee
Confidence            34788888998888999999999999998764            23        34688899997654321    12346


Q ss_pred             ccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCcC
Q psy6203         399 RSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG  477 (568)
Q Consensus       399 ~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp~  477 (568)
                      +||+.|+|||. ....++.++||||+||++|+|++|++||.+.+....+..+..+.+.+|.++++.+++||.+||..||.
T Consensus       176 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~  255 (329)
T PTZ00263        176 CGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPNWFDGRARDLVKGLLQTDHT  255 (329)
T ss_pred             cCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCCCCCHHHHHHHHHHhhcCHH
Confidence            89999999998 66778999999999999999999999999999889999999999999999999999999999999999


Q ss_pred             CCCC-----HHHHhcCccccc
Q psy6203         478 KRIK-----IQDLLGHNWVKM  493 (568)
Q Consensus       478 ~R~t-----~~~~l~hp~~~~  493 (568)
                      +|++     ++++++||||..
T Consensus       256 ~R~~~~~~~~~~ll~hp~f~~  276 (329)
T PTZ00263        256 KRLGTLKGGVADVKNHPYFHG  276 (329)
T ss_pred             HcCCCCCCCHHHHhcCCccCC
Confidence            9997     799999999975


No 456
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.88  E-value=2.1e-22  Score=204.30  Aligned_cols=156  Identities=19%  Similarity=0.308  Sum_probs=132.5

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Ccc--------eeEEEccccCcccccCCCCceecc
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MPI--------CTILISQYFPTILLPCKVGQVINL  397 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~~--------~~iki~dfG~~~~~~~~~~~~~~~  397 (568)
                      |..|++|.+++...++|++..+..++.|++.++            +++        +.+||+|||++....... .....
T Consensus        74 ~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-~~~~~  152 (312)
T cd05585          74 FINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD-DKTNT  152 (312)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC-Ccccc
Confidence            344788999998888999999999999999864            333        357889999775432222 22445


Q ss_pred             cccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCc
Q psy6203         398 LRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP  476 (568)
Q Consensus       398 ~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp  476 (568)
                      .+||+.|+|||. .+..|+.++||||+||++|+|++|++||.+.+..+.+..+..+...+|..+++++++||.+||..||
T Consensus       153 ~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp  232 (312)
T cd05585         153 FCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAKDLLIGLLSRDP  232 (312)
T ss_pred             ccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcCCCH
Confidence            689999999998 6678999999999999999999999999999988999999998888999999999999999999999


Q ss_pred             CCCC---CHHHHhcCcccccC
Q psy6203         477 GKRI---KIQDLLGHNWVKMG  494 (568)
Q Consensus       477 ~~R~---t~~~~l~hp~~~~~  494 (568)
                      .+|+   ++.++++||||...
T Consensus       233 ~~R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         233 TRRLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             HHcCCCCCHHHHHcCCCcCCC
Confidence            9997   58999999999853


No 457
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.87  E-value=2.1e-22  Score=205.03  Aligned_cols=155  Identities=23%  Similarity=0.404  Sum_probs=132.6

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Cc--------ceeEEEccccCcccccCCCCceecc
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MP--------ICTILISQYFPTILLPCKVGQVINL  397 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~--------~~~iki~dfG~~~~~~~~~~~~~~~  397 (568)
                      |..|++|.+++...+.+++..+..++.|++.++            ++        .+.+||+|||++..... .+.....
T Consensus        77 y~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~-~~~~~~~  155 (320)
T cd05590          77 FVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIF-NGKTTST  155 (320)
T ss_pred             CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCc-CCCcccc
Confidence            344789999998888999999999999998764            33        33578999997654322 2223455


Q ss_pred             cccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCc
Q psy6203         398 LRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP  476 (568)
Q Consensus       398 ~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp  476 (568)
                      .+||+.|+|||. .+..|+.++||||+||++|+|++|++||.+.+..+++..+..+....|.++++++.+||++||+.||
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~L~~dP  235 (320)
T cd05590         156 FCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQDAVDILKAFMTKNP  235 (320)
T ss_pred             cccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCH
Confidence            689999999998 6678899999999999999999999999999999999999998888899999999999999999999


Q ss_pred             CCCCCH------HHHhcCccccc
Q psy6203         477 GKRIKI------QDLLGHNWVKM  493 (568)
Q Consensus       477 ~~R~t~------~~~l~hp~~~~  493 (568)
                      .+|+++      +++++||||..
T Consensus       236 ~~R~~~~~~~~~~~~~~h~~f~~  258 (320)
T cd05590         236 TMRLGSLTLGGEEAILRHPFFKE  258 (320)
T ss_pred             HHCCCCCCCCCHHHHHcCCCcCC
Confidence            999998      99999999975


No 458
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.87  E-value=2e-22  Score=202.46  Aligned_cols=152  Identities=20%  Similarity=0.345  Sum_probs=130.8

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Cc--------ceeEEEccccCcccccCCCCceecc
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MP--------ICTILISQYFPTILLPCKVGQVINL  397 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~--------~~~iki~dfG~~~~~~~~~~~~~~~  397 (568)
                      |..|++|++++...+.+++..+..++.|++.++            ++        .+.+||+|||++.....    ....
T Consensus        82 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~----~~~~  157 (291)
T cd05612          82 YVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRD----RTWT  157 (291)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccC----Cccc
Confidence            334788999998888999999999999999864            22        34688999997654321    1234


Q ss_pred             cccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCc
Q psy6203         398 LRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP  476 (568)
Q Consensus       398 ~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp  476 (568)
                      .+||+.|+|||. .+..++.++||||+||++|+|++|+.||.+.+....+..+..+...+|..+++.+++||++||+.||
T Consensus       158 ~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dp  237 (291)
T cd05612         158 LCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPRHLDLYAKDLIKKLLVVDR  237 (291)
T ss_pred             ccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCccCCHHHHHHHHHHcCCCH
Confidence            579999999998 6677899999999999999999999999999999999999999988999999999999999999999


Q ss_pred             CCCCC-----HHHHhcCccccc
Q psy6203         477 GKRIK-----IQDLLGHNWVKM  493 (568)
Q Consensus       477 ~~R~t-----~~~~l~hp~~~~  493 (568)
                      .+|++     ++++++||||..
T Consensus       238 ~~R~~~~~~~~~~~l~h~~~~~  259 (291)
T cd05612         238 TRRLGNMKNGADDVKNHRWFKS  259 (291)
T ss_pred             HHccCCccCCHHHHhcCccccC
Confidence            99995     999999999974


No 459
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.87  E-value=1e-21  Score=181.62  Aligned_cols=189  Identities=18%  Similarity=0.191  Sum_probs=140.3

Q ss_pred             EEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCc---hHHHHHHHHHHHhCC-CCCcceeeEEEEeCCEEEEEEe
Q psy6203          11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED---LPRVKLEINALKHIS-HQHICKLFQVIETSSHIFMVIE   86 (568)
Q Consensus        11 ~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~---~~~~~~Ei~~l~~l~-hpnIv~l~~~~~~~~~~~lV~E   86 (568)
                      .+...|++|+||+|+++..  .+.+++.+.+........   ...+.+|+++|++|. |++|++++++    +..|++||
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme   78 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS   78 (218)
T ss_pred             ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence            4678899999999998875  677888777765443211   225788999999996 5889999886    34699999


Q ss_pred             ccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCceecCC-CCCceEEcCCCCeEEEeecCccCCCCCCcc--c
Q psy6203          87 YCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGYAHRDL-KPENVLLDRNQNLKLIDFGLCAKPEGGLES--Q  163 (568)
Q Consensus        87 ~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDl-kp~NIll~~~~~~kl~DFG~a~~~~~~~~~--~  163 (568)
                      |+.|.+|.+.+..      . ...++.|++.+|.++|++||+|||| ||+|||++.+|.++|+|||+|.........  .
T Consensus        79 yI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~  151 (218)
T PRK12274         79 YLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRL  151 (218)
T ss_pred             eecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHH
Confidence            9999998754321      1 2357889999999999999999999 799999999999999999999854432110  0


Q ss_pred             c----------ccccCCccccccccccCcccCC-cccceechhhHHHHHHhCCCCCCCCC
Q psy6203         164 L----------QTSCGSPNYAAPEVIKGKQYYG-SETDVWSMGVMLYALLCGFLPFDSDS  212 (568)
Q Consensus       164 ~----------~~~~gt~~y~aPE~l~~~~~~~-~~~DiwSlG~il~~lltG~~pf~~~~  212 (568)
                      +          .....++.|++|+.-.--...+ ...+.++.|+-+|.++|+..++.+++
T Consensus       152 L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        152 LAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence            0          0112577888887643221112 45677899999999999999876543


No 460
>KOG1035|consensus
Probab=99.87  E-value=3.9e-21  Score=209.73  Aligned_cols=203  Identities=18%  Similarity=0.243  Sum_probs=142.9

Q ss_pred             HHHHHHHHHHhCCCCCcceeeEEEEeCCE----EEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcCc
Q psy6203          52 RVKLEINALKHISHQHICKLFQVIETSSH----IFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLGY  127 (568)
Q Consensus        52 ~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~----~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i  127 (568)
                      ..+.|+..+.++.|+|++.++.+--....    ..+..++|...++...+..-+..+...++.+..++++||.|+|+...
T Consensus       228 ~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l  307 (1351)
T KOG1035|consen  228 TTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSL  307 (1351)
T ss_pred             HHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhcc
Confidence            34557777888899999999888643322    23445889999999999888999999999999999999999999966


Q ss_pred             eecCCCCC---ceEEcCCCCeEEE--eecCccCCCCCCccccccccCCccccccccccCccc-CCcccceechhhHHHHH
Q psy6203         128 AHRDLKPE---NVLLDRNQNLKLI--DFGLCAKPEGGLESQLQTSCGSPNYAAPEVIKGKQY-YGSETDVWSMGVMLYAL  201 (568)
Q Consensus       128 vHrDlkp~---NIll~~~~~~kl~--DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~~~DiwSlG~il~~l  201 (568)
                      .|.-+..+   +--.+..+.+.++  ||+.+.......  ......-+..+.|||....... .+...|+|.+|.....+
T Consensus       308 ~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~--~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgll~~~~  385 (1351)
T KOG1035|consen  308 EHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNE--KSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGLLLLQL  385 (1351)
T ss_pred             ceeEEecccccccccCccceeecchhhhcccccCCCcc--cchhhcCccccccccccccccchhhhhhHHHHHHHHHhhh
Confidence            66555544   3334455666666  888776554322  1122234556778888765542 12336999999999999


Q ss_pred             HhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCh-HHHHHHHHccccCcCCCCCHHHHhcCcccccCC
Q psy6203         202 LCGFLPFDSDSIDQLYDKILNGKYTEPPWMSP-NSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGP  266 (568)
Q Consensus       202 ltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  266 (568)
                      ..|..+-...   .....+       .+..+. ...+.+.+|+.-++++|+++.+++.|+|.+...
T Consensus       386 ~~~~~i~~~~---~~~~~~-------l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~~  441 (1351)
T KOG1035|consen  386 SQGEDISEKS---AVPVSL-------LDVLSTSELLDALPKCLDEDSEERLSALELLTHPFLRFPT  441 (1351)
T ss_pred             hhcCcccccc---cchhhh-------hccccchhhhhhhhhhcchhhhhccchhhhhhchhccccc
Confidence            8876542111   111111       111122 678899999999999999999999999998543


No 461
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.87  E-value=2.9e-22  Score=205.52  Aligned_cols=152  Identities=20%  Similarity=0.320  Sum_probs=130.6

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Cc--------ceeEEEccccCcccccCCCCceecc
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MP--------ICTILISQYFPTILLPCKVGQVINL  397 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~--------~~~iki~dfG~~~~~~~~~~~~~~~  397 (568)
                      |..|++|.+++...+.++++.+..++.|++.++            ++        .+++||+|||++.....    ...+
T Consensus       112 y~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~----~~~~  187 (340)
T PTZ00426        112 FVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT----RTYT  187 (340)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC----Ccce
Confidence            334788999998888999999999999998763            33        33578899997654321    1245


Q ss_pred             cccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCc
Q psy6203         398 LRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP  476 (568)
Q Consensus       398 ~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp  476 (568)
                      .+||+.|+|||. .+..++.++||||+||++|||++|.+||.+.+....+..+..+...+|..+++.+.++|++||..||
T Consensus       188 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~dp  267 (340)
T PTZ00426        188 LCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPKFLDNNCKHLMKKLLSHDL  267 (340)
T ss_pred             ecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHcccCH
Confidence            689999999998 6677899999999999999999999999999988889999999888899999999999999999999


Q ss_pred             CCCC-----CHHHHhcCccccc
Q psy6203         477 GKRI-----KIQDLLGHNWVKM  493 (568)
Q Consensus       477 ~~R~-----t~~~~l~hp~~~~  493 (568)
                      .+|+     |++++++||||..
T Consensus       268 ~~R~~~~~~~~~~~~~hp~f~~  289 (340)
T PTZ00426        268 TKRYGNLKKGAQNVKEHPWFGN  289 (340)
T ss_pred             HHcCCCCCCCHHHHHcCCCcCC
Confidence            9996     8999999999975


No 462
>KOG0612|consensus
Probab=99.87  E-value=2.4e-22  Score=217.47  Aligned_cols=156  Identities=24%  Similarity=0.347  Sum_probs=132.6

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc--------------------CcceeEEEccccCcccccCCCCce-ec
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF--------------------MPICTILISQYFPTILLPCKVGQV-IN  396 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~--------------------~~~~~iki~dfG~~~~~~~~~~~~-~~  396 (568)
                      |-+||+|..++...+++||+=||++..-++-|+                    .+.++||++|||-+. .....|.. ..
T Consensus       156 Y~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsCl-km~~dG~V~s~  234 (1317)
T KOG0612|consen  156 YMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCL-KMDADGTVRSS  234 (1317)
T ss_pred             cccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHH-hcCCCCcEEec
Confidence            445999999999999999999999999988653                    345678999999433 33345554 45


Q ss_pred             ccccccccccCCC------CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCC--CCCCHHHHH
Q psy6203         397 LLRSAIVLCSAPS------SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--KYTEP--PWMSPNSRQ  466 (568)
Q Consensus       397 ~~~gt~~~~~pe~------~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~--~~~~~--~~~s~~~~~  466 (568)
                      ..+|||-|.+||+      +...||..|||||+||++|||+.|..||.+++..+.|.+|+.-  .+.||  ..+|+++++
T Consensus       235 ~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakd  314 (1317)
T KOG0612|consen  235 VAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKD  314 (1317)
T ss_pred             cccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHH
Confidence            6799999999997      3367999999999999999999999999999999999999986  56777  559999999


Q ss_pred             HHHHccCCCcCCCCC---HHHHhcCcccccCC
Q psy6203         467 IVRSMLQVEPGKRIK---IQDLLGHNWVKMGP  495 (568)
Q Consensus       467 li~~~L~~dp~~R~t---~~~~l~hp~~~~~~  495 (568)
                      ||.+++ .+|+.|++   ++++..||||....
T Consensus       315 LI~~ll-~~~e~RLgrngiedik~HpFF~g~~  345 (1317)
T KOG0612|consen  315 LIEALL-CDREVRLGRNGIEDIKNHPFFEGID  345 (1317)
T ss_pred             HHHHHh-cChhhhcccccHHHHHhCccccCCC
Confidence            999998 78899998   99999999998543


No 463
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.86  E-value=6.3e-22  Score=201.68  Aligned_cols=153  Identities=19%  Similarity=0.324  Sum_probs=131.2

Q ss_pred             hHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Cc--------ceeEEEccccCcccccCCCCceecccc
Q psy6203         340 MGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MP--------ICTILISQYFPTILLPCKVGQVINLLR  399 (568)
Q Consensus       340 ~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~--------~~~iki~dfG~~~~~~~~~~~~~~~~~  399 (568)
                      .|++|..++...+.+++..+..++.|++.++            ++        .+.+||+|||++...... +......+
T Consensus        79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~-~~~~~~~~  157 (321)
T cd05591          79 NGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN-GVTTTTFC  157 (321)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccC-Cccccccc
Confidence            4778888888888999999999999998764            23        346789999976543222 22345568


Q ss_pred             cccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCcCC
Q psy6203         400 SAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK  478 (568)
Q Consensus       400 gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp~~  478 (568)
                      ||+.|+|||. .+..|+.++||||+||++|+|++|++||.+.+..+.+..+..+....|.++++++.+||.+||..||++
T Consensus       158 gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll~~~L~~dp~~  237 (321)
T cd05591         158 GTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSKEAVSILKAFMTKNPNK  237 (321)
T ss_pred             cCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhccCHHH
Confidence            9999999998 667789999999999999999999999999999999999999988889999999999999999999999


Q ss_pred             CC-------CHHHHhcCccccc
Q psy6203         479 RI-------KIQDLLGHNWVKM  493 (568)
Q Consensus       479 R~-------t~~~~l~hp~~~~  493 (568)
                      |+       +++++++||||..
T Consensus       238 R~~~~~~~~~~~~~~~hp~~~~  259 (321)
T cd05591         238 RLGCVASQGGEDAIKQHPFFKE  259 (321)
T ss_pred             cCCCCCCCCCHHHHhcCCccCC
Confidence            99       8999999999964


No 464
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.86  E-value=8.6e-22  Score=201.26  Aligned_cols=155  Identities=20%  Similarity=0.379  Sum_probs=130.7

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Ccc--------eeEEEccccCcccccCCCCceecc
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MPI--------CTILISQYFPTILLPCKVGQVINL  397 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~~--------~~iki~dfG~~~~~~~~~~~~~~~  397 (568)
                      |..|++|+.++...+.+++..++.++.|++.++            +++        +.+||+|||++....... .....
T Consensus        76 y~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~~~  154 (328)
T cd05593          76 YVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-ATMKT  154 (328)
T ss_pred             CCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc-ccccc
Confidence            334788888888888999999999999999764            333        357889999765432222 22345


Q ss_pred             cccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCc
Q psy6203         398 LRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP  476 (568)
Q Consensus       398 ~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp  476 (568)
                      .+||+.|+|||. .+..++.++||||+||++|+|++|++||.+.+..+....+......+|..+++++.+||.+||..||
T Consensus       155 ~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP  234 (328)
T cd05593         155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSADAKSLLSGLLIKDP  234 (328)
T ss_pred             ccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHHHHHHHHHHcCCCH
Confidence            689999999998 6677899999999999999999999999998888888888888888899999999999999999999


Q ss_pred             CCCC-----CHHHHhcCccccc
Q psy6203         477 GKRI-----KIQDLLGHNWVKM  493 (568)
Q Consensus       477 ~~R~-----t~~~~l~hp~~~~  493 (568)
                      ++|+     ++.++++||||..
T Consensus       235 ~~R~~~~~~~~~~il~h~~~~~  256 (328)
T cd05593         235 NKRLGGGPDDAKEIMRHSFFTG  256 (328)
T ss_pred             HHcCCCCCCCHHHHhcCCCcCC
Confidence            9997     8999999999974


No 465
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.86  E-value=7.4e-22  Score=200.65  Aligned_cols=154  Identities=21%  Similarity=0.321  Sum_probs=129.6

Q ss_pred             hhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Ccc--------eeEEEccccCcccccCCCCceeccc
Q psy6203         339 SMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MPI--------CTILISQYFPTILLPCKVGQVINLL  398 (568)
Q Consensus       339 ~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~~--------~~iki~dfG~~~~~~~~~~~~~~~~  398 (568)
                      ..|++|.+++...+++++..+..++.|++.++            +++        +.+||+|||++...... .......
T Consensus        78 ~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-~~~~~~~  156 (316)
T cd05620          78 LNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFG-DNRASTF  156 (316)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccC-CCceecc
Confidence            34788888888888999999999999999864            333        35789999976532211 1224567


Q ss_pred             ccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCcC
Q psy6203         399 RSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG  477 (568)
Q Consensus       399 ~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp~  477 (568)
                      +||+.|+|||. .+..|+.++||||+||++|+|++|+.||.+.+..+....+....+..|.+++.++++||.+||..||+
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~  236 (316)
T cd05620         157 CGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITKESKDILEKLFERDPT  236 (316)
T ss_pred             CCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHccCCHH
Confidence            89999999998 66778999999999999999999999999999888888888888888899999999999999999999


Q ss_pred             CCCCH-HHHhcCccccc
Q psy6203         478 KRIKI-QDLLGHNWVKM  493 (568)
Q Consensus       478 ~R~t~-~~~l~hp~~~~  493 (568)
                      +|+++ +++++||||+.
T Consensus       237 ~R~~~~~~~~~h~~f~~  253 (316)
T cd05620         237 RRLGVVGNIRGHPFFKT  253 (316)
T ss_pred             HcCCChHHHHcCCCcCC
Confidence            99997 68999999975


No 466
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.86  E-value=1.3e-21  Score=199.63  Aligned_cols=155  Identities=21%  Similarity=0.367  Sum_probs=131.8

Q ss_pred             hhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Cc--------ceeEEEccccCcccccCCCCceeccc
Q psy6203         339 SMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MP--------ICTILISQYFPTILLPCKVGQVINLL  398 (568)
Q Consensus       339 ~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~--------~~~iki~dfG~~~~~~~~~~~~~~~~  398 (568)
                      ..|++|++.+...+.++++.+..++.|++.++            ++        .+.+||+|||++..... .+......
T Consensus        82 ~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~-~~~~~~~~  160 (323)
T cd05584          82 LSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIH-EGTVTHTF  160 (323)
T ss_pred             CCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeeccc-CCCccccc
Confidence            34788999998888999999999999998764            33        33578899997653322 22234456


Q ss_pred             ccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCcC
Q psy6203         399 RSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG  477 (568)
Q Consensus       399 ~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp~  477 (568)
                      +||+.|+|||. .+..++.++||||+||++|||++|++||.+.+....+..+..+....|+.+++++.+||.+||..||+
T Consensus       161 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~  240 (323)
T cd05584         161 CGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLTPEARDLLKKLLKRNPS  240 (323)
T ss_pred             CCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcccCHh
Confidence            89999999998 66678999999999999999999999999999888889999998889999999999999999999999


Q ss_pred             CCC-----CHHHHhcCcccccC
Q psy6203         478 KRI-----KIQDLLGHNWVKMG  494 (568)
Q Consensus       478 ~R~-----t~~~~l~hp~~~~~  494 (568)
                      +|+     +++++++||||...
T Consensus       241 ~R~~~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         241 SRLGAGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             HcCCCCCCCHHHHhcCCCcCCC
Confidence            999     89999999999753


No 467
>KOG0607|consensus
Probab=99.86  E-value=3.9e-22  Score=188.72  Aligned_cols=155  Identities=21%  Similarity=0.440  Sum_probs=128.4

Q ss_pred             HHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Cc-----------ceeEEEccccCccccc----CCC--
Q psy6203         341 GVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MP-----------ICTILISQYFPTILLP----CKV--  391 (568)
Q Consensus       341 g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~-----------~~~iki~dfG~~~~~~----~~~--  391 (568)
                      ||.|.+.|..+.+|.|.++.++.+.|.+++            +|           .+-||||||-++....    +.+  
T Consensus       160 GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spas  239 (463)
T KOG0607|consen  160 GGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPAS  239 (463)
T ss_pred             CchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCC
Confidence            788889999999999999999999988764            23           3458999997642221    111  


Q ss_pred             CceecccccccccccCCC------CCCCCCCccceeehhHHHHHHHhCCCCCCCCC---------------HHHHHHHHH
Q psy6203         392 GQVINLLRSAIVLCSAPS------SKQYYGSETDVWSMGVMLYALLCGFLPFDSDS---------------IDQLYDKIL  450 (568)
Q Consensus       392 ~~~~~~~~gt~~~~~pe~------~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~---------------~~~~~~~i~  450 (568)
                      ...+.+-||+-.|||||+      ...+|+.++|.||||||+|.||+|.+||.|.-               ...++..|.
T Consensus       240 tP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQ  319 (463)
T KOG0607|consen  240 TPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQ  319 (463)
T ss_pred             CccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHh
Confidence            123556799999999996      56789999999999999999999999998632               245788999


Q ss_pred             cCCCCCCCC----CCHHHHHHHHHccCCCcCCCCCHHHHhcCcccccCC
Q psy6203         451 NGKYTEPPW----MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGP  495 (568)
Q Consensus       451 ~~~~~~~~~----~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~  495 (568)
                      .|.+.+|..    +|.+++|||+.+|.+|+..|.++.++++|||+..-.
T Consensus       320 EGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~  368 (463)
T KOG0607|consen  320 EGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCA  368 (463)
T ss_pred             ccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccc
Confidence            999999854    899999999999999999999999999999998543


No 468
>KOG0585|consensus
Probab=99.86  E-value=3.8e-22  Score=198.10  Aligned_cols=143  Identities=24%  Similarity=0.440  Sum_probs=121.3

Q ss_pred             CC-CChhhHHHHHHHHhhcc------------Ccce--------eEEEccccCcccccC----CCCceeccccccccccc
Q psy6203         352 LP-FDSDSIDQLYDKILSHF------------MPIC--------TILISQYFPTILLPC----KVGQVINLLRSAIVLCS  406 (568)
Q Consensus       352 ~~-~~e~~~~~~~~qil~~~------------~~~~--------~iki~dfG~~~~~~~----~~~~~~~~~~gt~~~~~  406 (568)
                      .+ |.+.++|.+++.++.|+            +||.        .+||+|||.+.....    +....+...+|||.|+|
T Consensus       204 ~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~A  283 (576)
T KOG0585|consen  204 KPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFA  283 (576)
T ss_pred             cccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccc
Confidence            35 99999999999999774            4444        689999996654311    11112444799999999


Q ss_pred             CCC-----CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCC--CCHHHHHHHHHccCCCcCCC
Q psy6203         407 APS-----SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPW--MSPNSRQIVRSMLQVEPGKR  479 (568)
Q Consensus       407 pe~-----~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~--~s~~~~~li~~~L~~dp~~R  479 (568)
                      ||.     ...+.+.+.||||+||+||+|+.|+.||.++...+++.+|......+|..  +++.++|||++||++||.+|
T Consensus       284 PE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~R  363 (576)
T KOG0585|consen  284 PELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQR  363 (576)
T ss_pred             hHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhhe
Confidence            997     25678899999999999999999999999999999999999998888865  79999999999999999999


Q ss_pred             CCHHHHhcCcccccC
Q psy6203         480 IKIQDLLGHNWVKMG  494 (568)
Q Consensus       480 ~t~~~~l~hp~~~~~  494 (568)
                      +++.++..|||....
T Consensus       364 i~l~~ik~Hpwvt~~  378 (576)
T KOG0585|consen  364 ITLPDIKLHPWVTRD  378 (576)
T ss_pred             eehhhheecceeccC
Confidence            999999999999865


No 469
>KOG0667|consensus
Probab=99.86  E-value=7.5e-22  Score=204.53  Aligned_cols=150  Identities=19%  Similarity=0.276  Sum_probs=118.2

Q ss_pred             HHHHHHHHhC--CCCCChhhHHHHHHHHhhcc------------Ccce----------eEEEccccCcccccCCCCceec
Q psy6203         341 GVMLYALLCG--FLPFDSDSIDQLYDKILSHF------------MPIC----------TILISQYFPTILLPCKVGQVIN  396 (568)
Q Consensus       341 g~~l~~~~~~--~~~~~e~~~~~~~~qil~~~------------~~~~----------~iki~dfG~~~~~~~~~~~~~~  396 (568)
                      +.+||++++.  ...|+-..+|.+.+||+.++            +||.          .|||.|||.|    |-.+....
T Consensus       271 ~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSS----c~~~q~vy  346 (586)
T KOG0667|consen  271 STNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSS----CFESQRVY  346 (586)
T ss_pred             hhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccc----cccCCcce
Confidence            6899999997  35799999999999999874            4444          5677777732    22333344


Q ss_pred             ccccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCC----------------------
Q psy6203         397 LLRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK----------------------  453 (568)
Q Consensus       397 ~~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~----------------------  453 (568)
                      +.+-+.+|.|||+ .+..|+.++||||||||++||++|.|.|+|++..+++..|..--                      
T Consensus       347 tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~  426 (586)
T KOG0667|consen  347 TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLK  426 (586)
T ss_pred             eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccC
Confidence            6778889999998 88899999999999999999999999999999988887764310                      


Q ss_pred             ------------------------------CCCCCC-----------CCHHHHHHHHHccCCCcCCCCCHHHHhcCcccc
Q psy6203         454 ------------------------------YTEPPW-----------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVK  492 (568)
Q Consensus       454 ------------------------------~~~~~~-----------~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~  492 (568)
                                                    ...|+.           -...+.|||++||..||.+|+|+.++|+|||+.
T Consensus       427 ~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~  506 (586)
T KOG0667|consen  427 GFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLT  506 (586)
T ss_pred             CceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccc
Confidence                                          001100           123568999999999999999999999999998


Q ss_pred             cC
Q psy6203         493 MG  494 (568)
Q Consensus       493 ~~  494 (568)
                      ..
T Consensus       507 ~~  508 (586)
T KOG0667|consen  507 GT  508 (586)
T ss_pred             cc
Confidence            44


No 470
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.86  E-value=1e-21  Score=199.57  Aligned_cols=155  Identities=22%  Similarity=0.334  Sum_probs=130.8

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Cc--------ceeEEEccccCcccccCCCCceecc
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MP--------ICTILISQYFPTILLPCKVGQVINL  397 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~--------~~~iki~dfG~~~~~~~~~~~~~~~  397 (568)
                      |..|++|.+++...+.+++..+..++.|++.++            ++        .+.+||+|||++....... .....
T Consensus        77 ~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-~~~~~  155 (316)
T cd05592          77 YLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-GKAST  155 (316)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-Ccccc
Confidence            334788988998888999999999999999764            23        3357899999775433222 23455


Q ss_pred             cccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCc
Q psy6203         398 LRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP  476 (568)
Q Consensus       398 ~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp  476 (568)
                      .+||+.|+|||. .+..++.++||||+||++|+|++|+.||.+.+..+++..+....+..|..++.++.+||.+||..||
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ll~~~l~~~P  235 (316)
T cd05592         156 FCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISKEAKDCLSKLFERDP  235 (316)
T ss_pred             ccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCCH
Confidence            689999999998 6667899999999999999999999999999988888888888888888999999999999999999


Q ss_pred             CCCCCH-HHHhcCccccc
Q psy6203         477 GKRIKI-QDLLGHNWVKM  493 (568)
Q Consensus       477 ~~R~t~-~~~l~hp~~~~  493 (568)
                      ++|+++ +++++||||..
T Consensus       236 ~~R~~~~~~l~~h~~~~~  253 (316)
T cd05592         236 TKRLGVDGDIRQHPFFRG  253 (316)
T ss_pred             HHcCCChHHHHcCcccCC
Confidence            999986 58999999975


No 471
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.86  E-value=1.2e-21  Score=199.92  Aligned_cols=154  Identities=21%  Similarity=0.331  Sum_probs=130.8

Q ss_pred             hhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Ccce--------eEEEccccCcccccCCCCceeccc
Q psy6203         339 SMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MPIC--------TILISQYFPTILLPCKVGQVINLL  398 (568)
Q Consensus       339 ~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~~~--------~iki~dfG~~~~~~~~~~~~~~~~  398 (568)
                      ..|++|.+++...+.|++..+..++.|++.++            +++.        .+||+|||++...... +......
T Consensus        83 ~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~-~~~~~~~  161 (323)
T cd05616          83 VNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWD-GVTTKTF  161 (323)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCC-CCccccC
Confidence            34788888888888999999999999998764            3333        5788999976543222 2234567


Q ss_pred             ccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCcC
Q psy6203         399 RSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG  477 (568)
Q Consensus       399 ~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp~  477 (568)
                      +||+.|+|||. ....|+.++||||+||++|||++|++||.+.+..+++..+......+|..+++++.+||.+||+.||.
T Consensus       162 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~~~s~~~~~li~~~l~~~p~  241 (323)
T cd05616         162 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPG  241 (323)
T ss_pred             CCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHcccCHH
Confidence            89999999998 66779999999999999999999999999999999999999988888989999999999999999999


Q ss_pred             CCCCH-----HHHhcCccccc
Q psy6203         478 KRIKI-----QDLLGHNWVKM  493 (568)
Q Consensus       478 ~R~t~-----~~~l~hp~~~~  493 (568)
                      +|+++     .++++||||..
T Consensus       242 ~R~~~~~~~~~~i~~h~~~~~  262 (323)
T cd05616         242 KRLGCGPEGERDIKEHAFFRY  262 (323)
T ss_pred             hcCCCCCCCHHHHhcCCCcCC
Confidence            99984     89999999974


No 472
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.86  E-value=1.1e-21  Score=200.82  Aligned_cols=157  Identities=17%  Similarity=0.332  Sum_probs=127.0

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Cc--------ceeEEEccccCcccccCCCCceecc
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MP--------ICTILISQYFPTILLPCKVGQVINL  397 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~--------~~~iki~dfG~~~~~~~~~~~~~~~  397 (568)
                      |..|++|.+++.....++++.++.++.|++.++            ++        .+.+||+|||++.............
T Consensus        86 ~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~~~  165 (332)
T cd05614          86 YVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERTYS  165 (332)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCcccc
Confidence            334788888888888999999999999999764            23        3468899999876543333333445


Q ss_pred             cccccccccCCC--CCCCCCCccceeehhHHHHHHHhCCCCCCCC----CHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Q psy6203         398 LRSAIVLCSAPS--SKQYYGSETDVWSMGVMLYALLCGFLPFDSD----SIDQLYDKILNGKYTEPPWMSPNSRQIVRSM  471 (568)
Q Consensus       398 ~~gt~~~~~pe~--~~~~~~~~~DiWSlG~il~eml~g~~pf~~~----~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~  471 (568)
                      .+||+.|+|||.  +...++.++||||+||++|||++|+.||...    ........+....+.+|..+++.+.+||.+|
T Consensus       166 ~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  245 (332)
T cd05614         166 FCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDLLHKL  245 (332)
T ss_pred             ccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHH
Confidence            689999999997  4456899999999999999999999999743    3345556677777778888999999999999


Q ss_pred             cCCCcCCCC-----CHHHHhcCcccccC
Q psy6203         472 LQVEPGKRI-----KIQDLLGHNWVKMG  494 (568)
Q Consensus       472 L~~dp~~R~-----t~~~~l~hp~~~~~  494 (568)
                      |..||++|+     +++++++||||+..
T Consensus       246 l~~dp~~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         246 LRKDPKKRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             cCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            999999999     78899999999753


No 473
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.86  E-value=1.5e-21  Score=199.23  Aligned_cols=154  Identities=21%  Similarity=0.301  Sum_probs=130.9

Q ss_pred             hhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Ccc--------eeEEEccccCcccccCCCCceeccc
Q psy6203         339 SMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MPI--------CTILISQYFPTILLPCKVGQVINLL  398 (568)
Q Consensus       339 ~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~~--------~~iki~dfG~~~~~~~~~~~~~~~~  398 (568)
                      ..|++|.+++...+.+++..+..++.|++.++            +++        +.+||+|||++....... ......
T Consensus        83 ~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~-~~~~~~  161 (324)
T cd05587          83 VNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG-KTTRTF  161 (324)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC-Cceeee
Confidence            34788988998888999999999999998864            333        357899999765432222 224456


Q ss_pred             ccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCcC
Q psy6203         399 RSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG  477 (568)
Q Consensus       399 ~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp~  477 (568)
                      +||+.|+|||. .+..++.++||||+||++|+|++|++||.+.+..+.+..+......+|..+++++.+||.+||..||.
T Consensus       162 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P~  241 (324)
T cd05587         162 CGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLLTKHPA  241 (324)
T ss_pred             cCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHH
Confidence            89999999998 66778999999999999999999999999999999999999988888889999999999999999999


Q ss_pred             CCCCH-----HHHhcCccccc
Q psy6203         478 KRIKI-----QDLLGHNWVKM  493 (568)
Q Consensus       478 ~R~t~-----~~~l~hp~~~~  493 (568)
                      +|+++     +++++||||..
T Consensus       242 ~R~~~~~~~~~~~~~hp~~~~  262 (324)
T cd05587         242 KRLGCGPTGERDIREHAFFRR  262 (324)
T ss_pred             HcCCCCCCCHHHHhcCCCcCC
Confidence            99986     89999999975


No 474
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=99.86  E-value=1.3e-21  Score=198.82  Aligned_cols=156  Identities=19%  Similarity=0.284  Sum_probs=130.2

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Cc--------ceeEEEccccCcccccCCCCceecc
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MP--------ICTILISQYFPTILLPCKVGQVINL  397 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~--------~~~iki~dfG~~~~~~~~~~~~~~~  397 (568)
                      |..|++|.+++.....+++..+..++.|++.++            ++        ...+||+|||++....... .....
T Consensus        77 y~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~~~~  155 (316)
T cd05619          77 YLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD-AKTCT  155 (316)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC-Cceee
Confidence            344788988998878899999999999998764            23        3357889999765432222 12345


Q ss_pred             cccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCc
Q psy6203         398 LRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP  476 (568)
Q Consensus       398 ~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp  476 (568)
                      .+||+.|+|||. .+..|+.++||||+||++|+|++|++||.+.+..+++..+....+..|.+++.++++||.+||..||
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~P  235 (316)
T cd05619         156 FCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTREAKDILVKLFVREP  235 (316)
T ss_pred             ecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHhccCH
Confidence            689999999998 6677899999999999999999999999999888888888877777888899999999999999999


Q ss_pred             CCCCCHH-HHhcCcccccC
Q psy6203         477 GKRIKIQ-DLLGHNWVKMG  494 (568)
Q Consensus       477 ~~R~t~~-~~l~hp~~~~~  494 (568)
                      ++|+++. ++++||||...
T Consensus       236 ~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05619         236 ERRLGVKGDIRQHPFFREI  254 (316)
T ss_pred             hhcCCChHHHHcCcccCCC
Confidence            9999996 99999999753


No 475
>KOG0658|consensus
Probab=99.86  E-value=9.6e-22  Score=190.46  Aligned_cols=154  Identities=18%  Similarity=0.224  Sum_probs=118.6

Q ss_pred             HHHHHHHhC----CCCCChhhHHHHHHHHhhc------------cCcce---------eEEEccccCcccccCCCCceec
Q psy6203         342 VMLYALLCG----FLPFDSDSIDQLYDKILSH------------FMPIC---------TILISQYFPTILLPCKVGQVIN  396 (568)
Q Consensus       342 ~~l~~~~~~----~~~~~e~~~~~~~~qil~~------------~~~~~---------~iki~dfG~~~~~~~~~~~~~~  396 (568)
                      .+|+++++.    ...++.-+|+-++.||..|            ++||.         .+||||||-|..+..  |....
T Consensus       106 ~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~--~epni  183 (364)
T KOG0658|consen  106 ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVK--GEPNI  183 (364)
T ss_pred             HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeecc--CCCce
Confidence            555555552    4567777777777777765            35554         479999997765543  33345


Q ss_pred             ccccccccccCCC--CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcC--C---------------CCCC
Q psy6203         397 LLRSAIVLCSAPS--SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNG--K---------------YTEP  457 (568)
Q Consensus       397 ~~~gt~~~~~pe~--~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~--~---------------~~~~  457 (568)
                      +...|.+|.|||.  +.+.|+.++||||+|||++||+.|++.|+|++..+++..|.+.  .               ..+|
T Consensus       184 SYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p  263 (364)
T KOG0658|consen  184 SYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFP  263 (364)
T ss_pred             eEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCc
Confidence            6677888888886  8999999999999999999999999999999988887776441  1               1111


Q ss_pred             ------------CCCCHHHHHHHHHccCCCcCCCCCHHHHhcCcccccCCCC
Q psy6203         458 ------------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPED  497 (568)
Q Consensus       458 ------------~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~  497 (568)
                                  ...++++.+|+.++|+.+|.+|.++.|+++||||+....+
T Consensus       264 ~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~fFdelr~~  315 (364)
T KOG0658|consen  264 QIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPFFDELRDP  315 (364)
T ss_pred             ccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchhhHHhhCc
Confidence                        2368999999999999999999999999999999865443


No 476
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.85  E-value=1.6e-21  Score=198.86  Aligned_cols=156  Identities=20%  Similarity=0.390  Sum_probs=131.4

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Ccc--------eeEEEccccCcccccCCCCceecc
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MPI--------CTILISQYFPTILLPCKVGQVINL  397 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~~--------~~iki~dfG~~~~~~~~~~~~~~~  397 (568)
                      |..|++|+.++...+.|++..++.++.|++.++            +++        +.+||+|||++...... ......
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~-~~~~~~  154 (323)
T cd05595          76 YANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD-GATMKT  154 (323)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCC-CCcccc
Confidence            344788888888888999999999999999764            333        35788999976543222 222345


Q ss_pred             cccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCc
Q psy6203         398 LRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP  476 (568)
Q Consensus       398 ~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp  476 (568)
                      .+||+.|+|||. .+..++.++||||+||++|||++|+.||.+.+.......+......+|..+++++.+||.+||..||
T Consensus       155 ~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li~~~L~~dP  234 (323)
T cd05595         155 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDP  234 (323)
T ss_pred             ccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHccCCH
Confidence            689999999998 6677899999999999999999999999999888888888888888888999999999999999999


Q ss_pred             CCCC-----CHHHHhcCcccccC
Q psy6203         477 GKRI-----KIQDLLGHNWVKMG  494 (568)
Q Consensus       477 ~~R~-----t~~~~l~hp~~~~~  494 (568)
                      ++|+     ++.++++||||...
T Consensus       235 ~~R~~~~~~~~~~~l~h~~~~~~  257 (323)
T cd05595         235 KQRLGGGPSDAKEVMEHRFFLSI  257 (323)
T ss_pred             HHhCCCCCCCHHHHHcCCCcCCC
Confidence            9998     89999999999753


No 477
>KOG4158|consensus
Probab=99.85  E-value=1.8e-21  Score=189.25  Aligned_cols=189  Identities=26%  Similarity=0.434  Sum_probs=140.4

Q ss_pred             CCCCcceeeEEEEe---------------------------CCEEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHH
Q psy6203          64 SHQHICKLFQVIET---------------------------SSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQIL  116 (568)
Q Consensus        64 ~hpnIv~l~~~~~~---------------------------~~~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~  116 (568)
                      +|||||++..+|.+                           ...+|+||..++ .+|..++..+ ..+.....-++.|++
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~-~~s~r~~~~~laQlL  351 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTR-HRSYRTGRVILAQLL  351 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcC-CCchHHHHHHHHHHH
Confidence            59999999887643                           235899999884 5888888654 456677788999999


Q ss_pred             HHHHHHHHcCceecCCCCCceEE--cCCC--CeEEEeecCccCCCC-----CCccccccccCCccccccccccCccc---
Q psy6203         117 SAVAYLHHLGYAHRDLKPENVLL--DRNQ--NLKLIDFGLCAKPEG-----GLESQLQTSCGSPNYAAPEVIKGKQY---  184 (568)
Q Consensus       117 ~aL~~LH~~~ivHrDlkp~NIll--~~~~--~~kl~DFG~a~~~~~-----~~~~~~~~~~gt~~y~aPE~l~~~~~---  184 (568)
                      +|+.|||.+||.|||+|.+|||+  ++++  .+.|+|||.+-....     ...+..-...|.-.-||||+....+.   
T Consensus       352 Eav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~a  431 (598)
T KOG4158|consen  352 EAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNA  431 (598)
T ss_pred             HHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCce
Confidence            99999999999999999999999  3444  478999997643221     11122233457888999999864331   


Q ss_pred             --CCcccceechhhHHHHHHhCCCCCCCCCHHHH-HHHHHcC-CCCCCCCCChHHHHHHHHccccCcCCCCCHH
Q psy6203         185 --YGSETDVWSMGVMLYALLCGFLPFDSDSIDQL-YDKILNG-KYTEPPWMSPNSRQIVRSMLQVEPGKRIKIQ  254 (568)
Q Consensus       185 --~~~~~DiwSlG~il~~lltG~~pf~~~~~~~~-~~~i~~~-~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~  254 (568)
                        .=.++|.|+.|.+.||+++...||.+....-+ .....+. -+..+..+++.+++++..+|+.||++|++..
T Consensus       432 vvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  432 VVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             eeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence              11378999999999999999999976321111 0112222 3345677999999999999999999999854


No 478
>PRK10345 hypothetical protein; Provisional
Probab=99.85  E-value=9.3e-21  Score=178.65  Aligned_cols=133  Identities=22%  Similarity=0.302  Sum_probs=107.4

Q ss_pred             EeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCchHHHHHHHHHHHhC-----CCCCcceeeEEEEeCC---EEE-E
Q psy6203          13 ERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGEDLPRVKLEINALKHI-----SHQHICKLFQVIETSS---HIF-M   83 (568)
Q Consensus        13 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~Ei~~l~~l-----~hpnIv~l~~~~~~~~---~~~-l   83 (568)
                      .+.||+|+||.||.  ++.++.. +||++..... .....+.+|+.+++.+     +||||++++++++++.   .++ +
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~-~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~   82 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD-GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV   82 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEecccc-chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence            57899999999995  7777666 6998875432 2345789999999999     5799999999998874   434 7


Q ss_pred             EEec--cCCCChHHHHHhcCCCCHHHHHHHHHHHHHHH-HHHHHcCceecCCCCCceEEcCC----CCeEEEeecC
Q psy6203          84 VIEY--CPGGELLDHIVERQRLGEKESRAFFRQILSAV-AYLHHLGYAHRDLKPENVLLDRN----QNLKLIDFGL  152 (568)
Q Consensus        84 V~E~--~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL-~~LH~~~ivHrDlkp~NIll~~~----~~~kl~DFG~  152 (568)
                      ||||  +.+++|.+++.+ +.+++.  ..++.|++.++ +|||+++|+||||||+|||++..    +.++|+||+.
T Consensus        83 I~e~~G~~~~tL~~~l~~-~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G  155 (210)
T PRK10345         83 IADFDGKPSITLTEFAEQ-CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIG  155 (210)
T ss_pred             EecCCCCcchhHHHHHHc-ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCC
Confidence            8999  557999999965 456666  35678888887 99999999999999999999743    3799999543


No 479
>KOG0983|consensus
Probab=99.85  E-value=2.3e-21  Score=179.92  Aligned_cols=163  Identities=22%  Similarity=0.280  Sum_probs=127.1

Q ss_pred             cCCCCcchhhhHHHHHHH-----Hh-CCCCCChhhHHHHHHHHhhcc-------------Ccc--------eeEEEcccc
Q psy6203         330 YYGSETDVWSMGVMLYAL-----LC-GFLPFDSDSIDQLYDKILSHF-------------MPI--------CTILISQYF  382 (568)
Q Consensus       330 ~~~~~~~~~~~g~~l~~~-----~~-~~~~~~e~~~~~~~~qil~~~-------------~~~--------~~iki~dfG  382 (568)
                      ++-+.+|+|+ +.+++..     ++ -.++++|..+..+...+++++             .||        +|||+||||
T Consensus       159 yFi~n~dV~I-cMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFG  237 (391)
T KOG0983|consen  159 YFITNTDVFI-CMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFG  237 (391)
T ss_pred             EEeeCchHHH-HHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeeccc
Confidence            3556778887 3444432     22 257899999998888888764             333        478999999


Q ss_pred             CcccccCCCCceecccccccccccCCC----CCCCCCCccceeehhHHHHHHHhCCCCCCCC-CHHHHHHHHHcCCCCC-
Q psy6203         383 PTILLPCKVGQVINLLRSAIVLCSAPS----SKQYYGSETDVWSMGVMLYALLCGFLPFDSD-SIDQLYDKILNGKYTE-  456 (568)
Q Consensus       383 ~~~~~~~~~~~~~~~~~gt~~~~~pe~----~~~~~~~~~DiWSlG~il~eml~g~~pf~~~-~~~~~~~~i~~~~~~~-  456 (568)
                      ++..+...  .+.+-..|.+.|||||.    ....|+-.+||||||++++||.||+.||.+. +..+++.+|+...++. 
T Consensus       238 IsGrlvdS--kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L  315 (391)
T KOG0983|consen  238 ISGRLVDS--KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLL  315 (391)
T ss_pred             ccceeecc--cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCC
Confidence            76443322  22344578899999996    4678999999999999999999999999985 4778888998876652 


Q ss_pred             CC--CCCHHHHHHHHHccCCCcCCCCCHHHHhcCcccccCC
Q psy6203         457 PP--WMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGP  495 (568)
Q Consensus       457 ~~--~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~  495 (568)
                      |.  .+|+++++|+..||++|+.+||...++|+|||+....
T Consensus       316 ~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye  356 (391)
T KOG0983|consen  316 PGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYE  356 (391)
T ss_pred             CcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecc
Confidence            32  3899999999999999999999999999999998653


No 480
>KOG0589|consensus
Probab=99.85  E-value=1e-21  Score=198.64  Aligned_cols=154  Identities=21%  Similarity=0.271  Sum_probs=136.3

Q ss_pred             hhhHHHHHHHHhCC--CCCChhhHHHHHHHHhhcc--------------------CcceeEEEccccCcccccCCCCcee
Q psy6203         338 WSMGVMLYALLCGF--LPFDSDSIDQLYDKILSHF--------------------MPICTILISQYFPTILLPCKVGQVI  395 (568)
Q Consensus       338 ~~~g~~l~~~~~~~--~~~~e~~~~~~~~qil~~~--------------------~~~~~iki~dfG~~~~~~~~~~~~~  395 (568)
                      |.-||++.+.+...  ..|+|+.+..+|.|++.++                    .+...|++.|||+|+....+.+ ..
T Consensus        85 Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~-~a  163 (426)
T KOG0589|consen   85 YCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDS-LA  163 (426)
T ss_pred             ecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchh-hh
Confidence            44589999888763  5899999999999999874                    3345789999998877655442 56


Q ss_pred             cccccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHccC
Q psy6203         396 NLLRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK-YTEPPWMSPNSRQIVRSMLQ  473 (568)
Q Consensus       396 ~~~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~s~~~~~li~~~L~  473 (568)
                      .+.+||++||.||. .+..|+.++|||||||++|||++-+++|.+.+...+..+|..+. .+.|...|.+.+.+|+.||.
T Consensus       164 ~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~ys~el~~lv~~~l~  243 (426)
T KOG0589|consen  164 STVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMYSSELRSLVKSMLR  243 (426)
T ss_pred             heecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccccHHHHHHHHHHhh
Confidence            78999999999998 88999999999999999999999999999999999999999987 56788899999999999999


Q ss_pred             CCcCCCCCHHHHhcCcccc
Q psy6203         474 VEPGKRIKIQDLLGHNWVK  492 (568)
Q Consensus       474 ~dp~~R~t~~~~l~hp~~~  492 (568)
                      .+|..||++.++|.+|...
T Consensus       244 ~~P~~RPsa~~LL~~P~l~  262 (426)
T KOG0589|consen  244 KNPEHRPSALELLRRPHLL  262 (426)
T ss_pred             cCCccCCCHHHHhhChhhh
Confidence            9999999999999999876


No 481
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.85  E-value=1.8e-21  Score=198.08  Aligned_cols=156  Identities=26%  Similarity=0.387  Sum_probs=131.5

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------C--------cceeEEEccccCcccccCCCCceecc
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------M--------PICTILISQYFPTILLPCKVGQVINL  397 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~--------~~~~iki~dfG~~~~~~~~~~~~~~~  397 (568)
                      |..|++|...+...+.+++..+..++.|++.++            +        ..+.+||+|||++...... +.....
T Consensus        77 ~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~-~~~~~~  155 (318)
T cd05570          77 YVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILG-GVTTST  155 (318)
T ss_pred             CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcC-CCcccc
Confidence            334788888888878999999999999999864            2        2346788999976543222 222345


Q ss_pred             cccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCc
Q psy6203         398 LRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP  476 (568)
Q Consensus       398 ~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp  476 (568)
                      .+||+.|+|||. .+..++.++||||+||++|+|++|+.||.+.+.......+......+|..+++++.+||++||..||
T Consensus       156 ~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~dP  235 (318)
T cd05570         156 FCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSKEAKSILKSFLTKNP  235 (318)
T ss_pred             eecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcCCHHHHHHHHHHccCCH
Confidence            689999999998 6677899999999999999999999999999988888889888888888899999999999999999


Q ss_pred             CCCCCH-----HHHhcCcccccC
Q psy6203         477 GKRIKI-----QDLLGHNWVKMG  494 (568)
Q Consensus       477 ~~R~t~-----~~~l~hp~~~~~  494 (568)
                      ++|||+     .++++||||+..
T Consensus       236 ~~R~s~~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         236 EKRLGCLPTGEQDIKGHPFFREI  258 (318)
T ss_pred             HHcCCCCCCCHHHHhcCCCcCCC
Confidence            999999     999999999753


No 482
>PTZ00284 protein kinase; Provisional
Probab=99.85  E-value=1.1e-21  Score=210.14  Aligned_cols=150  Identities=17%  Similarity=0.154  Sum_probs=114.4

Q ss_pred             HHHHHHHHhCCCCCChhhHHHHHHHHhhcc-------------Ccce------------------------eEEEccccC
Q psy6203         341 GVMLYALLCGFLPFDSDSIDQLYDKILSHF-------------MPIC------------------------TILISQYFP  383 (568)
Q Consensus       341 g~~l~~~~~~~~~~~e~~~~~~~~qil~~~-------------~~~~------------------------~iki~dfG~  383 (568)
                      |+.|.+++...++|++..+..++.|++.++             +|+.                        .+||+|||.
T Consensus       215 g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~  294 (467)
T PTZ00284        215 GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGG  294 (467)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCc
Confidence            677888888888999999999999988764             2222                        277888885


Q ss_pred             cccccCCCCceecccccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC-----
Q psy6203         384 TILLPCKVGQVINLLRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEP-----  457 (568)
Q Consensus       384 ~~~~~~~~~~~~~~~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~-----  457 (568)
                      +..    ........+||+.|+|||. .+..|+.++|||||||++|||++|++||.+.+..+.+..+......+|     
T Consensus       295 ~~~----~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~  370 (467)
T PTZ00284        295 CCD----ERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAG  370 (467)
T ss_pred             ccc----CccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHh
Confidence            432    1222346789999999998 667899999999999999999999999998876555443322110000     


Q ss_pred             -----------------------C--------------CCCHHHHHHHHHccCCCcCCCCCHHHHhcCcccccC
Q psy6203         458 -----------------------P--------------WMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMG  494 (568)
Q Consensus       458 -----------------------~--------------~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~  494 (568)
                                             .              ..++.+.|||.+||++||.+|+|++|+++||||...
T Consensus       371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~  444 (467)
T PTZ00284        371 RCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKY  444 (467)
T ss_pred             hccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccccc
Confidence                                   0              013557799999999999999999999999999864


No 483
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.85  E-value=1.1e-21  Score=200.63  Aligned_cols=156  Identities=21%  Similarity=0.338  Sum_probs=129.9

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Ccc--------eeEEEccccCcccccCCCCceecc
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MPI--------CTILISQYFPTILLPCKVGQVINL  397 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~~--------~~iki~dfG~~~~~~~~~~~~~~~  397 (568)
                      |..|++|.+++...+.+++..+..++.|++.++            +++        +.+||+|||++....... .....
T Consensus        77 ~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~-~~~~~  155 (330)
T cd05586          77 YMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDN-KTTNT  155 (330)
T ss_pred             CCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC-CCccC
Confidence            334788888888888999999999999999864            333        357889999765432222 23456


Q ss_pred             cccccccccCCC--CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC-CCCHHHHHHHHHccCC
Q psy6203         398 LRSAIVLCSAPS--SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPP-WMSPNSRQIVRSMLQV  474 (568)
Q Consensus       398 ~~gt~~~~~pe~--~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~s~~~~~li~~~L~~  474 (568)
                      .+||+.|+|||.  ....|+.++||||+||++|+|++|+.||.+.+..+.+..+..+...+|. .+++++.+||++||..
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~~L~~  235 (330)
T cd05586         156 FCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLSDEGRQFVKGLLNR  235 (330)
T ss_pred             ccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCC
Confidence            789999999997  4567899999999999999999999999999988888899888777765 4799999999999999


Q ss_pred             CcCCCC----CHHHHhcCcccccC
Q psy6203         475 EPGKRI----KIQDLLGHNWVKMG  494 (568)
Q Consensus       475 dp~~R~----t~~~~l~hp~~~~~  494 (568)
                      ||.+|+    +++++++||||...
T Consensus       236 ~P~~R~~~~~~~~~ll~h~~~~~~  259 (330)
T cd05586         236 NPQHRLGAHRDAVELKEHPFFADI  259 (330)
T ss_pred             CHHHCCCCCCCHHHHhcCccccCC
Confidence            999998    68999999999753


No 484
>KOG0582|consensus
Probab=99.85  E-value=1.8e-21  Score=192.23  Aligned_cols=165  Identities=18%  Similarity=0.303  Sum_probs=129.8

Q ss_pred             CCCCcchhhh-----HHHHHHHHhCC--CCCChhhHHHHHHHHhhcc------------Ccc--------eeEEEccccC
Q psy6203         331 YGSETDVWSM-----GVMLYALLCGF--LPFDSDSIDQLYDKILSHF------------MPI--------CTILISQYFP  383 (568)
Q Consensus       331 ~~~~~~~~~~-----g~~l~~~~~~~--~~~~e~~~~~~~~qil~~~------------~~~--------~~iki~dfG~  383 (568)
                      +.+...+|.+     ||.+.++++..  .-|.|..|..|++++|.|+            .|+        ++||++|||.
T Consensus        93 Fvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgv  172 (516)
T KOG0582|consen   93 FVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGV  172 (516)
T ss_pred             EEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCcee
Confidence            3444445543     77788887752  2399999999999999875            344        4678888885


Q ss_pred             cccccCCCCc---ee-cccccccccccCCC---CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Q psy6203         384 TILLPCKVGQ---VI-NLLRSAIVLCSAPS---SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTE  456 (568)
Q Consensus       384 ~~~~~~~~~~---~~-~~~~gt~~~~~pe~---~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~  456 (568)
                      +..+ .+.|.   .. .+++||++|||||+   ...+|+.|+||||+|++..||.+|..||..-.+.+++-.-+.+.++.
T Consensus       173 sa~l-~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~  251 (516)
T KOG0582|consen  173 SASL-FDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPT  251 (516)
T ss_pred             eeee-cccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCC
Confidence            4322 22332   12 67899999999998   66789999999999999999999999999998888877777777763


Q ss_pred             CC----------CCCHHHHHHHHHccCCCcCCCCCHHHHhcCcccccCCC
Q psy6203         457 PP----------WMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPE  496 (568)
Q Consensus       457 ~~----------~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~  496 (568)
                      +.          .++..++.+|..||++||.+|||++++++|+||+....
T Consensus       252 ~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~  301 (516)
T KOG0582|consen  252 LLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKS  301 (516)
T ss_pred             cccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccc
Confidence            32          26778999999999999999999999999999986543


No 485
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.85  E-value=2.3e-21  Score=197.65  Aligned_cols=154  Identities=21%  Similarity=0.291  Sum_probs=129.8

Q ss_pred             hhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Ccc--------eeEEEccccCcccccCCCCceeccc
Q psy6203         339 SMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MPI--------CTILISQYFPTILLPCKVGQVINLL  398 (568)
Q Consensus       339 ~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~~--------~~iki~dfG~~~~~~~~~~~~~~~~  398 (568)
                      ..|++|..++...+.+++..+..++.|++.++            +++        +.+||+|||++..... ........
T Consensus        78 ~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~-~~~~~~~~  156 (323)
T cd05575          78 VNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE-HSKTTSTF  156 (323)
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCccccc-CCCccccc
Confidence            34788888888888999999999999999864            333        3578899997654322 12223456


Q ss_pred             ccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCcC
Q psy6203         399 RSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG  477 (568)
Q Consensus       399 ~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp~  477 (568)
                      +||+.|+|||. .+..++.++||||+||++|+|++|.+||.+.+..+.+..+..+....++.+++.+.+||.+||+.||.
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p~  236 (323)
T cd05575         157 CGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVSARHLLEGLLQKDRT  236 (323)
T ss_pred             cCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHH
Confidence            89999999998 66778999999999999999999999999999889999999888888888999999999999999999


Q ss_pred             CCCCH----HHHhcCccccc
Q psy6203         478 KRIKI----QDLLGHNWVKM  493 (568)
Q Consensus       478 ~R~t~----~~~l~hp~~~~  493 (568)
                      +|+++    .++++||||..
T Consensus       237 ~R~~~~~~~~~il~~~~~~~  256 (323)
T cd05575         237 KRLGAKDDFLEIKNHVFFSS  256 (323)
T ss_pred             hCCCCCCCHHHHHcCCCcCC
Confidence            99997    69999999975


No 486
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=99.85  E-value=2.8e-21  Score=193.53  Aligned_cols=151  Identities=16%  Similarity=0.102  Sum_probs=111.6

Q ss_pred             HHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Ccc--------eeEEEccccCcccccCCCCceeccccc
Q psy6203         341 GVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MPI--------CTILISQYFPTILLPCKVGQVINLLRS  400 (568)
Q Consensus       341 g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~~--------~~iki~dfG~~~~~~~~~~~~~~~~~g  400 (568)
                      |+.+..+......++++.+..++.|++.++            +++        +.+||+|||++...............|
T Consensus        84 ~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  163 (287)
T cd07848          84 KNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVA  163 (287)
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccccccccccc
Confidence            344444444456799999999999999864            233        357899999776543322222345678


Q ss_pred             ccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-------------------CCCC---
Q psy6203         401 AIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGK-------------------YTEP---  457 (568)
Q Consensus       401 t~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~-------------------~~~~---  457 (568)
                      |+.|+|||. .+..++.++||||+||++|+|++|++||.+.+..+....+....                   ...|   
T Consensus       164 ~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (287)
T cd07848         164 TRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVN  243 (287)
T ss_pred             ccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCccc
Confidence            999999997 55668999999999999999999999999877654433332210                   0011   


Q ss_pred             ----------CCCCHHHHHHHHHccCCCcCCCCCHHHHhcCccc
Q psy6203         458 ----------PWMSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWV  491 (568)
Q Consensus       458 ----------~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~  491 (568)
                                ..+|+++.+||++||++||++|+|++++++||||
T Consensus       244 ~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         244 HPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             CcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence                      1267889999999999999999999999999998


No 487
>KOG4279|consensus
Probab=99.85  E-value=6.4e-22  Score=203.61  Aligned_cols=154  Identities=18%  Similarity=0.300  Sum_probs=127.3

Q ss_pred             hHHHHHHHHhC-CCCC--ChhhHHHHHHHHhhcc------------Cc---------ceeEEEccccCcccccCCCCcee
Q psy6203         340 MGVMLYALLCG-FLPF--DSDSIDQLYDKILSHF------------MP---------ICTILISQYFPTILLPCKVGQVI  395 (568)
Q Consensus       340 ~g~~l~~~~~~-~~~~--~e~~~~~~~~qil~~~------------~~---------~~~iki~dfG~~~~~~~~~~~~~  395 (568)
                      .||.|-++++. =||+  .|..+..+-+|||+|+            +|         .+.+||+|||-+..+.. -+..+
T Consensus       655 PGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg-inP~T  733 (1226)
T KOG4279|consen  655 PGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG-INPCT  733 (1226)
T ss_pred             CCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhcc-CCccc
Confidence            48999999986 4788  8999999999999985            12         23689999996644322 23346


Q ss_pred             cccccccccccCCC---CCCCCCCccceeehhHHHHHHHhCCCCCCCC-CHHHHHHHH--HcCCCCCCCCCCHHHHHHHH
Q psy6203         396 NLLRSAIVLCSAPS---SKQYYGSETDVWSMGVMLYALLCGFLPFDSD-SIDQLYDKI--LNGKYTEPPWMSPNSRQIVR  469 (568)
Q Consensus       396 ~~~~gt~~~~~pe~---~~~~~~~~~DiWSlG~il~eml~g~~pf~~~-~~~~~~~~i--~~~~~~~~~~~s~~~~~li~  469 (568)
                      .++.||..|||||+   +..+||.++||||+||++.||.||+|||... ++...+.++  .+..+++|..+|.+|+.||.
T Consensus       734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~Fil  813 (1226)
T KOG4279|consen  734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFIL  813 (1226)
T ss_pred             cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHH
Confidence            78999999999998   7789999999999999999999999999753 344444443  34467789999999999999


Q ss_pred             HccCCCcCCCCCHHHHhcCcccccC
Q psy6203         470 SMLQVEPGKRIKIQDLLGHNWVKMG  494 (568)
Q Consensus       470 ~~L~~dp~~R~t~~~~l~hp~~~~~  494 (568)
                      +|+..||..||+|.++|+.||++..
T Consensus       814 rcFepd~~~R~sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  814 RCFEPDPCDRPSAKDLLQDPFLQHN  838 (1226)
T ss_pred             HHcCCCcccCccHHHhccCcccccC
Confidence            9999999999999999999999865


No 488
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.85  E-value=1.1e-21  Score=200.33  Aligned_cols=155  Identities=21%  Similarity=0.395  Sum_probs=130.2

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc-------------Ccce--------eEEEccccCcccccCCCCceec
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF-------------MPIC--------TILISQYFPTILLPCKVGQVIN  396 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~-------------~~~~--------~iki~dfG~~~~~~~~~~~~~~  396 (568)
                      |..|++|+.++...+.++++.+..++.|++.++             +++.        .+||+|||++..... .+....
T Consensus        76 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~-~~~~~~  154 (325)
T cd05594          76 YANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK-DGATMK  154 (325)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCC-CCcccc
Confidence            344788888888878999999999998888653             3333        478899997654322 222344


Q ss_pred             ccccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCC
Q psy6203         397 LLRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVE  475 (568)
Q Consensus       397 ~~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~d  475 (568)
                      ..+||+.|+|||. .+..++.++||||+||++|+|++|+.||.+.+.......+......+|..+++++.+||.+||..|
T Consensus       155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~d  234 (325)
T cd05594         155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPEAKSLLSGLLKKD  234 (325)
T ss_pred             cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHHHHHHHHhhcC
Confidence            5689999999998 667889999999999999999999999999988888888888888889999999999999999999


Q ss_pred             cCCCC-----CHHHHhcCccccc
Q psy6203         476 PGKRI-----KIQDLLGHNWVKM  493 (568)
Q Consensus       476 p~~R~-----t~~~~l~hp~~~~  493 (568)
                      |++|+     ++.++++||||..
T Consensus       235 P~~R~~~~~~~~~~il~h~~~~~  257 (325)
T cd05594         235 PKQRLGGGPDDAKEIMQHKFFAG  257 (325)
T ss_pred             HHHhCCCCCCCHHHHhcCCCcCC
Confidence            99997     8999999999975


No 489
>KOG0594|consensus
Probab=99.85  E-value=3e-21  Score=187.28  Aligned_cols=154  Identities=17%  Similarity=0.287  Sum_probs=120.6

Q ss_pred             HHHHHHHhCCC----CCChhhHHHHHHHHhhcc------------Ccce--------eEEEccccCcccccCCCCceecc
Q psy6203         342 VMLYALLCGFL----PFDSDSIDQLYDKILSHF------------MPIC--------TILISQYFPTILLPCKVGQVINL  397 (568)
Q Consensus       342 ~~l~~~~~~~~----~~~e~~~~~~~~qil~~~------------~~~~--------~iki~dfG~~~~~~~~~~~~~~~  397 (568)
                      .+|-.++....    .++...++.+|+|++.|+            +||.        .+|++|||+|+..... ......
T Consensus       101 ~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip-~~~yt~  179 (323)
T KOG0594|consen  101 RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIP-MRTYTP  179 (323)
T ss_pred             ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCC-cccccc
Confidence            44455555433    467788999999999874            4554        5799999988865432 223566


Q ss_pred             cccccccccCCC--CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCC----------------CCC
Q psy6203         398 LRSAIVLCSAPS--SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILN--GKY----------------TEP  457 (568)
Q Consensus       398 ~~gt~~~~~pe~--~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~--~~~----------------~~~  457 (568)
                      .++|.||.|||+  +.+.|+..+||||+|||++||+++++.|+|.+..+++..|..  |.+                .+|
T Consensus       180 evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~  259 (323)
T KOG0594|consen  180 EVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFP  259 (323)
T ss_pred             cEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCc
Confidence            789999999998  777899999999999999999999999999999888888755  111                111


Q ss_pred             CC------------CCHHHHHHHHHccCCCcCCCCCHHHHhcCcccccCCC
Q psy6203         458 PW------------MSPNSRQIVRSMLQVEPGKRIKIQDLLGHNWVKMGPE  496 (568)
Q Consensus       458 ~~------------~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~  496 (568)
                      .+            .++++.+++.+||+.+|.+|.|+..++.||||...+.
T Consensus       260 ~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~~~~  310 (323)
T KOG0594|consen  260 KWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSELPE  310 (323)
T ss_pred             CCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhccccc
Confidence            11            3468999999999999999999999999999986543


No 490
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.85  E-value=3.1e-21  Score=197.28  Aligned_cols=154  Identities=18%  Similarity=0.270  Sum_probs=125.0

Q ss_pred             hhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Cc--------ceeEEEccccCcccccCCCCceeccc
Q psy6203         339 SMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MP--------ICTILISQYFPTILLPCKVGQVINLL  398 (568)
Q Consensus       339 ~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~--------~~~iki~dfG~~~~~~~~~~~~~~~~  398 (568)
                      ..|++|.+++...+++++..++.++.|++.++            ++        .+.+||+|||++..... .+......
T Consensus        78 ~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~-~~~~~~~~  156 (329)
T cd05588          78 VSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR-PGDTTSTF  156 (329)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCcccccccc-CCCccccc
Confidence            34788888888778999999999999999864            23        33588999997654222 22334567


Q ss_pred             ccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCC---------CHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q psy6203         399 RSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSD---------SIDQLYDKILNGKYTEPPWMSPNSRQIV  468 (568)
Q Consensus       399 ~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~---------~~~~~~~~i~~~~~~~~~~~s~~~~~li  468 (568)
                      +||+.|+|||. .+..++.++||||+||++|+|++|++||...         ......+.+.......|..+++++.+||
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~li  236 (329)
T cd05588         157 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLSVKASSVL  236 (329)
T ss_pred             cCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence            89999999998 6677899999999999999999999999631         1223556677777888889999999999


Q ss_pred             HHccCCCcCCCCC------HHHHhcCccccc
Q psy6203         469 RSMLQVEPGKRIK------IQDLLGHNWVKM  493 (568)
Q Consensus       469 ~~~L~~dp~~R~t------~~~~l~hp~~~~  493 (568)
                      ++||..||.+|+|      ++++++||||..
T Consensus       237 ~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~  267 (329)
T cd05588         237 KGFLNKDPKERLGCHPQTGFRDIKSHPFFRN  267 (329)
T ss_pred             HHHhccCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            9999999999997      789999999974


No 491
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.85  E-value=3.6e-21  Score=196.24  Aligned_cols=155  Identities=21%  Similarity=0.303  Sum_probs=131.6

Q ss_pred             hhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Ccc--------eeEEEccccCcccccCCCCceeccc
Q psy6203         339 SMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MPI--------CTILISQYFPTILLPCKVGQVINLL  398 (568)
Q Consensus       339 ~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~~--------~~iki~dfG~~~~~~~~~~~~~~~~  398 (568)
                      ..|++|.+++...++|++..+..++.|++.++            +++        +.+||+|||++...... +......
T Consensus        83 ~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~-~~~~~~~  161 (323)
T cd05615          83 VNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVD-GVTTRTF  161 (323)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCC-CccccCc
Confidence            34788999998888999999999999999864            333        35789999976543222 2234556


Q ss_pred             ccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCcC
Q psy6203         399 RSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG  477 (568)
Q Consensus       399 ~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp~  477 (568)
                      +||+.|+|||. .+..++.++||||+||++|+|++|++||.+.+.......+.......|..+++++.+|+.+||.+||.
T Consensus       162 ~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~p~  241 (323)
T cd05615         162 CGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPS  241 (323)
T ss_pred             cCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCHHHHHHHHHHcccCHh
Confidence            89999999998 66778999999999999999999999999999888999999988888889999999999999999999


Q ss_pred             CCCC-----HHHHhcCcccccC
Q psy6203         478 KRIK-----IQDLLGHNWVKMG  494 (568)
Q Consensus       478 ~R~t-----~~~~l~hp~~~~~  494 (568)
                      +|++     .+++++||||...
T Consensus       242 ~R~~~~~~~~~~i~~h~~f~~~  263 (323)
T cd05615         242 KRLGCGPEGERDIREHAFFRRI  263 (323)
T ss_pred             hCCCCCCCCHHHHhcCcccCCC
Confidence            9997     4799999999853


No 492
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved 
Probab=99.85  E-value=5.4e-21  Score=195.09  Aligned_cols=152  Identities=18%  Similarity=0.300  Sum_probs=128.2

Q ss_pred             hHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------C--------cceeEEEccccCcccccCCCCceecccc
Q psy6203         340 MGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------M--------PICTILISQYFPTILLPCKVGQVINLLR  399 (568)
Q Consensus       340 ~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~--------~~~~iki~dfG~~~~~~~~~~~~~~~~~  399 (568)
                      .|++|..++.+ ..|++..+..++.|++.++            +        ..+.+||+|||++..... .+......+
T Consensus        85 ~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~-~~~~~~~~~  162 (324)
T cd05589          85 AGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMG-FGDRTSTFC  162 (324)
T ss_pred             CCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCC-CCCcccccc
Confidence            36777777765 5799999999999999764            2        234688999997643221 222345678


Q ss_pred             cccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCcCC
Q psy6203         400 SAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPGK  478 (568)
Q Consensus       400 gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp~~  478 (568)
                      ||+.|+|||. .+..++.++||||+||++|+|++|++||.+.+..+....+..+....|..+++++.+||.+||..||.+
T Consensus       163 g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~  242 (324)
T cd05589         163 GTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLSREAISIMRRLLRRNPER  242 (324)
T ss_pred             cCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhcCHhH
Confidence            9999999998 667889999999999999999999999999998889999988888888899999999999999999999


Q ss_pred             CC-----CHHHHhcCccccc
Q psy6203         479 RI-----KIQDLLGHNWVKM  493 (568)
Q Consensus       479 R~-----t~~~~l~hp~~~~  493 (568)
                      ||     ++.++++||||+.
T Consensus       243 R~~~~~~~~~~l~~~~~f~~  262 (324)
T cd05589         243 RLGSGEKDAEDVKKQPFFRD  262 (324)
T ss_pred             cCCCCCCCHHHHhhCCCcCC
Confidence            99     6999999999975


No 493
>KOG0195|consensus
Probab=99.84  E-value=1.5e-21  Score=180.79  Aligned_cols=237  Identities=21%  Similarity=0.342  Sum_probs=187.3

Q ss_pred             EEEeeecccCCeEEEEEEEcCCCcEEEEEEeecCCcCCc-hHHHHHHHHHHHhCCCCCcceeeEEEEeCCEEEEEEeccC
Q psy6203          11 ILERTVGSGGFAKVKLATHVLTGEKVAIKIMKKATLGED-LPRVKLEINALKHISHQHICKLFQVIETSSHIFMVIEYCP   89 (568)
Q Consensus        11 ~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~-~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lV~E~~~   89 (568)
                      .+.-+|.+...|..|+|++.  |..+++|++.-...... ...|..|.-.|+-+.||||+.+++.+....++.++..|++
T Consensus       193 nl~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp  270 (448)
T KOG0195|consen  193 NLITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMP  270 (448)
T ss_pred             hhhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeecc
Confidence            34567889999999999974  56678898876544322 2357778888999999999999999999999999999999


Q ss_pred             CCChHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHHcC--ceecCCCCCceEEcCCCCeEEE--eecCccCCCCCCccc
Q psy6203          90 GGELLDHIVERQR--LGEKESRAFFRQILSAVAYLHHLG--YAHRDLKPENVLLDRNQNLKLI--DFGLCAKPEGGLESQ  163 (568)
Q Consensus        90 ~g~L~~~i~~~~~--l~~~~~~~i~~qi~~aL~~LH~~~--ivHrDlkp~NIll~~~~~~kl~--DFG~a~~~~~~~~~~  163 (568)
                      .|+|++.+.+...  .+..++.+++.++++|++|||+..  |.---|....+++|++-+.+|+  |--++-..       
T Consensus       271 ~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe-------  343 (448)
T KOG0195|consen  271 FGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQE-------  343 (448)
T ss_pred             chHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeec-------
Confidence            9999999987644  567789999999999999999864  4445688899999998876664  32222111       


Q ss_pred             cccccCCccccccccccCcccC--CcccceechhhHHHHHHhCCCCCCCCCHHHHHHHH-HcC-CCCCCCCCChHHHHHH
Q psy6203         164 LQTSCGSPNYAAPEVIKGKQYY--GSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKI-LNG-KYTEPPWMSPNSRQIV  239 (568)
Q Consensus       164 ~~~~~gt~~y~aPE~l~~~~~~--~~~~DiwSlG~il~~lltG~~pf~~~~~~~~~~~i-~~~-~~~~~~~~~~~~~~li  239 (568)
                       ....-+|.|+|||.++..+..  -.++|+|||++++|||.|...||..-+..+.--+| ..| ....|+.+++....|+
T Consensus       344 -~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ippgis~hm~klm  422 (448)
T KOG0195|consen  344 -VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLM  422 (448)
T ss_pred             -cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHHH
Confidence             112347899999999865532  34789999999999999999999877766554443 233 4568899999999999


Q ss_pred             HHccccCcCCCCCHHHHh
Q psy6203         240 RSMLQVEPGKRIKIQDLL  257 (568)
Q Consensus       240 ~~~L~~dP~~Rps~~ell  257 (568)
                      +-|+..||.+||..+.++
T Consensus       423 ~icmnedpgkrpkfdmiv  440 (448)
T KOG0195|consen  423 NICMNEDPGKRPKFDMIV  440 (448)
T ss_pred             HHHhcCCCCcCCCcceeh
Confidence            999999999999988764


No 494
>KOG0596|consensus
Probab=99.84  E-value=3.1e-21  Score=194.75  Aligned_cols=152  Identities=16%  Similarity=0.227  Sum_probs=115.2

Q ss_pred             HHHHHHHhCCCC-CChhhHHHHHHHHhhcc------------Ccce-------eEEEccccCcccccCCCCc-eeccccc
Q psy6203         342 VMLYALLCGFLP-FDSDSIDQLYDKILSHF------------MPIC-------TILISQYFPTILLPCKVGQ-VINLLRS  400 (568)
Q Consensus       342 ~~l~~~~~~~~~-~~e~~~~~~~~qil~~~------------~~~~-------~iki~dfG~~~~~~~~~~~-~~~~~~g  400 (568)
                      ++|-..|+.... .+.-.++.++.|+|.++            +||+       .+|+.|||+|+....+... ...+-+|
T Consensus       444 ~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTsI~kdsQvG  523 (677)
T KOG0596|consen  444 IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTSIVKDSQVG  523 (677)
T ss_pred             ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeeeEEeeeechhcccCccccceeeccccC
Confidence            566677775433 33357899999998764            5555       5899999999887766544 4556799


Q ss_pred             ccccccCCC---CC---------CCCCCccceeehhHHHHHHHhCCCCCCCC-CHHHHHHHHHcC--CCCCCCCCCHH-H
Q psy6203         401 AIVLCSAPS---SK---------QYYGSETDVWSMGVMLYALLCGFLPFDSD-SIDQLYDKILNG--KYTEPPWMSPN-S  464 (568)
Q Consensus       401 t~~~~~pe~---~~---------~~~~~~~DiWSlG~il~eml~g~~pf~~~-~~~~~~~~i~~~--~~~~~~~~s~~-~  464 (568)
                      |+.||+||.   ..         -..+.++||||||||||+|+.|++||..- +...-+..|..-  ..++|..-+.. +
T Consensus       524 T~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~l  603 (677)
T KOG0596|consen  524 TVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDEL  603 (677)
T ss_pred             cccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchHH
Confidence            999999995   11         12678999999999999999999999753 244445555543  23455444444 8


Q ss_pred             HHHHHHccCCCcCCCCCHHHHhcCccccc
Q psy6203         465 RQIVRSMLQVEPGKRIKIQDLLGHNWVKM  493 (568)
Q Consensus       465 ~~li~~~L~~dp~~R~t~~~~l~hp~~~~  493 (568)
                      .++++.||..||++|||+.++|+|||+..
T Consensus       604 i~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  604 IDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             HHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence            99999999999999999999999999974


No 495
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=99.84  E-value=4.4e-21  Score=195.83  Aligned_cols=155  Identities=21%  Similarity=0.302  Sum_probs=130.5

Q ss_pred             hhhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Ccc--------eeEEEccccCcccccCCCCceecc
Q psy6203         338 WSMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MPI--------CTILISQYFPTILLPCKVGQVINL  397 (568)
Q Consensus       338 ~~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~~--------~~iki~dfG~~~~~~~~~~~~~~~  397 (568)
                      |..|++|.+++...+.+++..++.++.|++.++            +++        +.+||+|||++.......+ ....
T Consensus        77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~-~~~~  155 (325)
T cd05602          77 YINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG-TTST  155 (325)
T ss_pred             CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC-Cccc
Confidence            334788888998888999999999999999864            333        3578899997754332222 3456


Q ss_pred             cccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCc
Q psy6203         398 LRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEP  476 (568)
Q Consensus       398 ~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp  476 (568)
                      .+||+.|+|||. .+..++.++||||+||++|+|++|.+||.+.+..+.+..+.......++.+++.+.++|.+||+.||
T Consensus       156 ~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~li~~~l~~~p  235 (325)
T cd05602         156 FCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDR  235 (325)
T ss_pred             ccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCCCHHHHHHHHHHcccCH
Confidence            789999999998 6678999999999999999999999999999988888888888777788899999999999999999


Q ss_pred             CCCCCHH----HHhcCccccc
Q psy6203         477 GKRIKIQ----DLLGHNWVKM  493 (568)
Q Consensus       477 ~~R~t~~----~~l~hp~~~~  493 (568)
                      .+|+++.    ++++|+||..
T Consensus       236 ~~R~~~~~~~~~i~~~~~~~~  256 (325)
T cd05602         236 TKRLGAKDDFMEIKNHIFFSP  256 (325)
T ss_pred             HHCCCCCCCHHHHhcCcccCC
Confidence            9999865    8999999964


No 496
>KOG0986|consensus
Probab=99.84  E-value=1e-21  Score=193.85  Aligned_cols=164  Identities=16%  Similarity=0.254  Sum_probs=128.0

Q ss_pred             CCCCcchhhh-----HHHHHHHHhCCC--CCChhhHHHHHHHHhhcc------------CcceeEEEccccCc------c
Q psy6203         331 YGSETDVWSM-----GVMLYALLCGFL--PFDSDSIDQLYDKILSHF------------MPICTILISQYFPT------I  385 (568)
Q Consensus       331 ~~~~~~~~~~-----g~~l~~~~~~~~--~~~e~~~~~~~~qil~~~------------~~~~~iki~dfG~~------~  385 (568)
                      |.+++++..+     ||+|.-+|...+  -|+|+.++.+..+|+-|+            +||.||++.|+|..      .
T Consensus       254 feTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGL  333 (591)
T KOG0986|consen  254 FETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGL  333 (591)
T ss_pred             ecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccce
Confidence            5666665332     777766666555  799999999999998763            66777666666622      2


Q ss_pred             cccCCCCceecccccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCC----HHHHHHHHHcCCCCCCCCC
Q psy6203         386 LLPCKVGQVINLLRSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDS----IDQLYDKILNGKYTEPPWM  460 (568)
Q Consensus       386 ~~~~~~~~~~~~~~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~----~~~~~~~i~~~~~~~~~~~  460 (568)
                      +.....|......+||..|||||+ .+.-|+.++|||||||++|||+.|+.||....    ..++-+.+....-..|..+
T Consensus       334 Avei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kF  413 (591)
T KOG0986|consen  334 AVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKF  413 (591)
T ss_pred             EEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhccccc
Confidence            222344555666799999999998 55569999999999999999999999997643    2355566777777788999


Q ss_pred             CHHHHHHHHHccCCCcCCCCC-----HHHHhcCcccccC
Q psy6203         461 SPNSRQIVRSMLQVEPGKRIK-----IQDLLGHNWVKMG  494 (568)
Q Consensus       461 s~~~~~li~~~L~~dp~~R~t-----~~~~l~hp~~~~~  494 (568)
                      |+++++|...+|++||.+|++     ++++.+||||+..
T Consensus       414 S~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~l  452 (591)
T KOG0986|consen  414 SEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDL  452 (591)
T ss_pred             CHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccC
Confidence            999999999999999999996     6799999999853


No 497
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.84  E-value=3.4e-21  Score=196.00  Aligned_cols=154  Identities=16%  Similarity=0.333  Sum_probs=130.5

Q ss_pred             hhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Cc--------ceeEEEccccCcccccCCCCceeccc
Q psy6203         339 SMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MP--------ICTILISQYFPTILLPCKVGQVINLL  398 (568)
Q Consensus       339 ~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~--------~~~iki~dfG~~~~~~~~~~~~~~~~  398 (568)
                      ..|++|++++.....++++.+..++.|++.++            ++        .+.+||+|||++...... .......
T Consensus        80 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~-~~~~~~~  158 (318)
T cd05582          80 LRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDH-EKKAYSF  158 (318)
T ss_pred             CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCC-CCceecc
Confidence            34688888988878899999999999999764            22        335788999976543322 1223456


Q ss_pred             ccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCcC
Q psy6203         399 RSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG  477 (568)
Q Consensus       399 ~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp~  477 (568)
                      +||+.|++||. ....++.++||||+||++|+|++|+.||.+.+..+.+..+.......|..+++++.+||.+||+.||+
T Consensus       159 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~li~~~l~~~P~  238 (318)
T cd05582         159 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRALFKRNPA  238 (318)
T ss_pred             cCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHh
Confidence            89999999998 66778999999999999999999999999999888888898888888989999999999999999999


Q ss_pred             CCCC-----HHHHhcCccccc
Q psy6203         478 KRIK-----IQDLLGHNWVKM  493 (568)
Q Consensus       478 ~R~t-----~~~~l~hp~~~~  493 (568)
                      +|++     ++++++||||..
T Consensus       239 ~R~~a~~~~~~~~~~~~~~~~  259 (318)
T cd05582         239 NRLGAGPDGVEEIKRHPFFST  259 (318)
T ss_pred             HcCCCCCCCHHHHhCCCCcCC
Confidence            9999     778999999975


No 498
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.84  E-value=4.3e-21  Score=195.92  Aligned_cols=154  Identities=18%  Similarity=0.278  Sum_probs=129.3

Q ss_pred             hhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Ccc--------eeEEEccccCcccccCCCCceeccc
Q psy6203         339 SMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MPI--------CTILISQYFPTILLPCKVGQVINLL  398 (568)
Q Consensus       339 ~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~~--------~~iki~dfG~~~~~~~~~~~~~~~~  398 (568)
                      ..|++|+.++...+++++..+..++.|++.++            +++        +.+||+|||++....... ......
T Consensus        78 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~-~~~~~~  156 (325)
T cd05604          78 VNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS-DTTTTF  156 (325)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC-CCcccc
Confidence            34778888888888999999999999999864            333        357889999765432222 223456


Q ss_pred             ccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHHHHHHHHHccCCCcC
Q psy6203         399 RSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDSDSIDQLYDKILNGKYTEPPWMSPNSRQIVRSMLQVEPG  477 (568)
Q Consensus       399 ~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~~~~~~~~~~i~~~~~~~~~~~s~~~~~li~~~L~~dp~  477 (568)
                      +||+.|+|||. .+..|+.++||||+||++|+|++|.+||.+.+..+++..+.......++..+..+.++|.+||..||.
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ll~~~p~  236 (325)
T cd05604         157 CGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASLTAWSILEELLEKDRQ  236 (325)
T ss_pred             cCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCHHHHHHHHHHhccCHH
Confidence            89999999998 66778999999999999999999999999999888889998888777778999999999999999999


Q ss_pred             CCCCH----HHHhcCccccc
Q psy6203         478 KRIKI----QDLLGHNWVKM  493 (568)
Q Consensus       478 ~R~t~----~~~l~hp~~~~  493 (568)
                      +|+++    .++++||||..
T Consensus       237 ~R~~~~~~~~~i~~h~~f~~  256 (325)
T cd05604         237 RRLGAKEDFLEIQEHPFFES  256 (325)
T ss_pred             hcCCCCCCHHHHhcCCCcCC
Confidence            99986    59999999975


No 499
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.84  E-value=8.6e-21  Score=193.94  Aligned_cols=154  Identities=19%  Similarity=0.294  Sum_probs=124.1

Q ss_pred             hhHHHHHHHHhCCCCCChhhHHHHHHHHhhcc------------Cc--------ceeEEEccccCcccccCCCCceeccc
Q psy6203         339 SMGVMLYALLCGFLPFDSDSIDQLYDKILSHF------------MP--------ICTILISQYFPTILLPCKVGQVINLL  398 (568)
Q Consensus       339 ~~g~~l~~~~~~~~~~~e~~~~~~~~qil~~~------------~~--------~~~iki~dfG~~~~~~~~~~~~~~~~  398 (568)
                      ..|++|..++...+.+++..++.++.|++.++            ++        .+.+||+|||++..... .+......
T Consensus        78 ~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~-~~~~~~~~  156 (329)
T cd05618          78 VNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR-PGDTTSTF  156 (329)
T ss_pred             CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccC-CCCccccc
Confidence            34678888888778999999999999998764            23        34688999997654322 22234567


Q ss_pred             ccccccccCCC-CCCCCCCccceeehhHHHHHHHhCCCCCCC---------CCHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q psy6203         399 RSAIVLCSAPS-SKQYYGSETDVWSMGVMLYALLCGFLPFDS---------DSIDQLYDKILNGKYTEPPWMSPNSRQIV  468 (568)
Q Consensus       399 ~gt~~~~~pe~-~~~~~~~~~DiWSlG~il~eml~g~~pf~~---------~~~~~~~~~i~~~~~~~~~~~s~~~~~li  468 (568)
                      +||+.|+|||. .+..++.++||||+||++|+|++|++||..         .........+......+|..++..+.+||
T Consensus       157 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~~~~~~ll  236 (329)
T cd05618         157 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVKAASVL  236 (329)
T ss_pred             cCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCCHHHHHHH
Confidence            89999999998 667889999999999999999999999952         11233556677777888989999999999


Q ss_pred             HHccCCCcCCCCC------HHHHhcCccccc
Q psy6203         469 RSMLQVEPGKRIK------IQDLLGHNWVKM  493 (568)
Q Consensus       469 ~~~L~~dp~~R~t------~~~~l~hp~~~~  493 (568)
                      ++||..||++|+|      ++++++||||..
T Consensus       237 ~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~  267 (329)
T cd05618         237 KSFLNKDPKERLGCHPQTGFADIQGHPFFRN  267 (329)
T ss_pred             HHHhcCCHHHcCCCCCCCCHHHHhcCCCCCC
Confidence            9999999999998      479999999975


No 500
>smart00090 RIO RIO-like kinase.
Probab=99.84  E-value=1.6e-20  Score=181.35  Aligned_cols=143  Identities=21%  Similarity=0.239  Sum_probs=115.1

Q ss_pred             CeEEEeeecccCCeEEEEEE-EcCCCcEEEEEEeecCCcCC-----------------------chHHHHHHHHHHHhCC
Q psy6203           9 QYILERTVGSGGFAKVKLAT-HVLTGEKVAIKIMKKATLGE-----------------------DLPRVKLEINALKHIS   64 (568)
Q Consensus         9 ~Y~i~~~lG~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~-----------------------~~~~~~~Ei~~l~~l~   64 (568)
                      -|.+.+.||+|++|.||+|. +..+|+.||+|++.......                       ....+.+|+.++.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            58899999999999999998 77799999999987543210                       0123567999999997


Q ss_pred             CC--CcceeeEEEEeCCEEEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHcC-ceecCCCCCceEEcC
Q psy6203          65 HQ--HICKLFQVIETSSHIFMVIEYCPGGELLDHIVERQRLGEKESRAFFRQILSAVAYLHHLG-YAHRDLKPENVLLDR  141 (568)
Q Consensus        65 hp--nIv~l~~~~~~~~~~~lV~E~~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~aL~~LH~~~-ivHrDlkp~NIll~~  141 (568)
                      +.  .+.++++.   . ..++||||++|++|.........+....+..++.||+.+|.+||+.| |+||||||+||+++ 
T Consensus       109 ~~~i~~p~~~~~---~-~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-  183 (237)
T smart00090      109 EAGVPVPKPIAW---R-RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-  183 (237)
T ss_pred             hcCCCCCeeeEe---c-CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-
Confidence            53  33444442   2 34899999999888776545556777778899999999999999999 99999999999998 


Q ss_pred             CCCeEEEeecCccCC
Q psy6203         142 NQNLKLIDFGLCAKP  156 (568)
Q Consensus       142 ~~~~kl~DFG~a~~~  156 (568)
                      ++.++|+|||.|...
T Consensus       184 ~~~i~LiDFg~a~~~  198 (237)
T smart00090      184 DGKVVIIDVSQSVEL  198 (237)
T ss_pred             CCCEEEEEChhhhcc
Confidence            889999999987643


Done!