Query psy6205
Match_columns 224
No_of_seqs 287 out of 1930
Neff 8.5
Searched_HMMs 46136
Date Fri Aug 16 20:25:06 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6205.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6205hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0160 GabT 4-aminobutyrate a 100.0 4E-48 8.7E-53 340.3 15.8 177 38-223 172-360 (447)
2 COG0161 BioA Adenosylmethionin 100.0 3.4E-45 7.4E-50 320.3 15.5 177 38-222 166-359 (449)
3 KOG1404|consensus 100.0 8.9E-45 1.9E-49 307.0 16.3 170 46-223 171-352 (442)
4 COG4992 ArgD Ornithine/acetylo 100.0 7.9E-44 1.7E-48 305.9 14.7 197 19-223 100-323 (404)
5 PRK05965 hypothetical protein; 100.0 1.1E-41 2.3E-46 305.8 17.2 171 45-223 174-362 (459)
6 PRK06938 diaminobutyrate--2-ox 100.0 7.4E-41 1.6E-45 300.5 16.0 169 46-223 189-369 (464)
7 PRK07482 hypothetical protein; 100.0 1.5E-40 3.2E-45 298.6 17.3 177 40-223 173-367 (461)
8 PRK06943 adenosylmethionine--8 100.0 1.8E-40 3.8E-45 297.4 17.3 174 41-223 177-368 (453)
9 PRK07030 adenosylmethionine--8 100.0 1.8E-40 3.9E-45 298.1 17.4 175 40-223 169-362 (466)
10 PRK07678 aminotransferase; Val 100.0 2.2E-40 4.7E-45 296.9 17.0 175 41-223 168-359 (451)
11 PRK06931 diaminobutyrate--2-ox 100.0 1.9E-40 4.1E-45 297.7 16.5 173 42-223 179-363 (459)
12 KOG1403|consensus 100.0 3.1E-41 6.8E-46 277.5 10.3 175 47-223 165-351 (452)
13 PRK07481 hypothetical protein; 100.0 7.8E-40 1.7E-44 293.1 17.3 176 41-223 167-360 (449)
14 PRK08742 adenosylmethionine--8 100.0 8.5E-40 1.8E-44 293.9 17.3 174 40-222 191-382 (472)
15 PRK07480 putative aminotransfe 100.0 1.8E-39 3.9E-44 291.1 17.3 172 44-223 177-364 (456)
16 PRK07483 hypothetical protein; 100.0 1.4E-39 3.1E-44 290.9 16.3 175 42-223 154-344 (443)
17 PLN02760 4-aminobutyrate:pyruv 100.0 2.7E-39 5.9E-44 292.6 17.3 172 45-223 218-407 (504)
18 PRK07036 hypothetical protein; 100.0 2.8E-39 6.1E-44 290.5 17.2 172 44-223 178-368 (466)
19 KOG1402|consensus 100.0 2.1E-39 4.5E-44 269.3 13.7 139 75-223 196-347 (427)
20 PRK06062 hypothetical protein; 100.0 4.3E-39 9.4E-44 288.4 16.6 171 46-223 173-357 (451)
21 PRK06916 adenosylmethionine--8 100.0 6.2E-39 1.3E-43 288.0 17.3 175 40-223 178-371 (460)
22 PRK06105 aminotransferase; Pro 100.0 6.2E-39 1.4E-43 288.0 17.2 177 40-223 171-365 (460)
23 PRK06148 hypothetical protein; 100.0 6.2E-39 1.4E-43 310.0 17.0 171 47-223 743-925 (1013)
24 PRK12403 putative aminotransfe 100.0 1.1E-38 2.3E-43 286.4 17.0 172 44-223 180-367 (460)
25 TIGR03372 putres_am_tran putre 100.0 3.1E-38 6.6E-43 281.6 15.6 144 77-223 210-366 (442)
26 PRK05639 4-aminobutyrate amino 100.0 6.9E-38 1.5E-42 280.8 16.5 176 42-223 172-360 (457)
27 PF00202 Aminotran_3: Aminotra 100.0 3.6E-38 7.9E-43 273.3 13.7 147 70-223 158-316 (339)
28 PRK06917 hypothetical protein; 100.0 1E-37 2.2E-42 279.2 17.0 169 47-223 160-344 (447)
29 PRK06149 hypothetical protein; 100.0 1.9E-37 4.1E-42 299.3 16.7 170 46-223 704-885 (972)
30 PRK11522 putrescine--2-oxoglut 100.0 2.2E-37 4.8E-42 277.5 14.7 146 75-223 215-373 (459)
31 PRK06082 4-aminobutyrate amino 100.0 4.8E-37 1E-41 275.6 16.8 169 41-223 187-368 (459)
32 TIGR00709 dat 2,4-diaminobutyr 100.0 4.4E-37 9.5E-42 275.0 16.5 171 44-223 162-344 (442)
33 KOG1401|consensus 100.0 1E-37 2.2E-42 265.7 11.7 199 18-222 115-347 (433)
34 PRK13360 omega amino acid--pyr 100.0 1.1E-36 2.4E-41 272.2 17.5 172 44-223 172-362 (442)
35 PRK06058 4-aminobutyrate amino 100.0 6.5E-37 1.4E-41 274.1 16.0 130 89-223 217-358 (443)
36 PRK09221 beta alanine--pyruvat 100.0 1.3E-36 2.9E-41 271.9 17.1 174 42-223 173-365 (445)
37 PRK08593 4-aminobutyrate amino 100.0 2.6E-36 5.6E-41 270.1 17.1 173 42-223 162-346 (445)
38 PRK06541 hypothetical protein; 100.0 4.4E-36 9.5E-41 269.5 17.3 176 40-223 174-365 (460)
39 PRK06173 adenosylmethionine--8 100.0 1.8E-35 3.9E-40 263.4 16.7 148 70-223 188-352 (429)
40 PLN02974 adenosylmethionine-8- 100.0 1.7E-35 3.7E-40 278.5 15.2 149 69-220 560-732 (817)
41 PRK05630 adenosylmethionine--8 100.0 7.7E-35 1.7E-39 259.0 15.6 144 71-223 186-347 (422)
42 PRK07986 adenosylmethionine--8 100.0 7E-35 1.5E-39 259.5 15.3 145 73-223 189-350 (428)
43 PRK12389 glutamate-1-semialdeh 100.0 9.6E-35 2.1E-39 259.1 14.8 142 75-223 187-341 (428)
44 PRK08117 4-aminobutyrate amino 100.0 3.2E-34 6.8E-39 256.2 16.7 171 44-223 164-346 (433)
45 PRK05769 4-aminobutyrate amino 100.0 2.7E-34 5.9E-39 256.8 16.3 172 42-223 174-358 (441)
46 PLN02482 glutamate-1-semialdeh 100.0 3.4E-35 7.3E-40 264.0 10.2 198 18-223 154-387 (474)
47 COG0001 HemL Glutamate-1-semia 100.0 2.7E-34 5.8E-39 249.4 11.8 203 15-222 105-341 (432)
48 TIGR00700 GABAtrnsam 4-aminobu 100.0 4.3E-33 9.3E-38 248.0 16.2 167 47-223 158-336 (420)
49 PRK07495 4-aminobutyrate amino 100.0 3.6E-33 7.8E-38 248.6 15.5 145 73-223 181-337 (425)
50 PRK03715 argD acetylornithine 100.0 2.5E-33 5.5E-38 247.5 11.6 128 90-223 178-317 (395)
51 TIGR00699 GABAtrns_euk 4-amino 100.0 7.4E-33 1.6E-37 247.8 14.7 163 47-223 211-388 (464)
52 PRK06918 4-aminobutyrate amino 100.0 2.1E-32 4.6E-37 245.5 16.5 171 44-223 176-358 (451)
53 TIGR02407 ectoine_ectB diamino 100.0 1.8E-32 3.9E-37 243.4 14.7 145 73-223 176-334 (412)
54 PRK06777 4-aminobutyrate amino 100.0 3E-32 6.5E-37 242.6 15.8 146 72-223 180-337 (421)
55 PRK00615 glutamate-1-semialdeh 100.0 1.8E-32 3.9E-37 244.3 14.3 142 75-223 188-342 (433)
56 PRK09792 4-aminobutyrate trans 100.0 3.2E-32 7E-37 242.4 15.4 145 73-223 181-337 (421)
57 PRK09264 diaminobutyrate--2-ox 100.0 4.6E-32 1E-36 241.7 14.5 144 74-223 181-338 (425)
58 PRK07046 aminotransferase; Val 100.0 1.2E-32 2.7E-37 246.7 10.1 198 18-223 129-364 (453)
59 PRK08297 L-lysine aminotransfe 100.0 1.5E-31 3.3E-36 239.2 15.7 142 72-223 209-365 (443)
60 PRK08360 4-aminobutyrate amino 100.0 2.3E-31 5E-36 238.1 16.6 169 46-223 163-343 (443)
61 TIGR00508 bioA adenosylmethion 100.0 2.4E-31 5.2E-36 237.1 16.0 144 74-223 193-353 (427)
62 PRK05964 adenosylmethionine--8 100.0 3.2E-31 7E-36 236.2 16.4 147 71-223 182-346 (423)
63 TIGR03246 arg_catab_astC succi 100.0 8.3E-31 1.8E-35 231.8 14.5 129 90-223 178-318 (397)
64 PRK04013 argD acetylornithine/ 100.0 5.6E-31 1.2E-35 229.9 12.9 113 90-212 161-285 (364)
65 TIGR03251 LAT_fam L-lysine 6-t 100.0 3E-30 6.5E-35 230.3 15.5 142 72-223 202-358 (431)
66 PLN00144 acetylornithine trans 100.0 1.9E-29 4.2E-34 222.0 14.8 139 75-223 156-306 (382)
67 PRK04612 argD acetylornithine 100.0 2.8E-29 6E-34 222.6 14.9 130 89-223 185-326 (408)
68 PRK12381 bifunctional succinyl 100.0 1E-28 2.2E-33 219.0 14.1 129 90-223 182-322 (406)
69 KOG1405|consensus 100.0 1.4E-28 2.9E-33 206.6 10.1 205 9-223 167-407 (484)
70 PRK00062 glutamate-1-semialdeh 100.0 7.4E-28 1.6E-32 214.8 13.8 142 75-223 184-338 (426)
71 PLN02624 ornithine-delta-amino 100.0 1.7E-27 3.6E-32 214.9 15.2 141 75-223 211-364 (474)
72 TIGR00713 hemL glutamate-1-sem 99.9 4E-27 8.7E-32 209.8 14.5 141 75-222 182-335 (423)
73 PRK06209 glutamate-1-semialdeh 99.9 3.3E-27 7.2E-32 210.8 12.9 138 75-223 174-329 (431)
74 PRK03244 argD acetylornithine 99.9 1.3E-26 2.9E-31 204.7 12.9 129 90-223 182-322 (398)
75 TIGR01885 Orn_aminotrans ornit 99.9 5E-26 1.1E-30 201.4 14.5 141 75-223 173-326 (401)
76 PRK08088 4-aminobutyrate amino 99.9 1.7E-25 3.7E-30 199.5 15.6 145 73-223 182-338 (425)
77 PRK04073 rocD ornithine--oxo-a 99.9 4.4E-25 9.5E-30 195.2 15.7 129 90-223 185-326 (396)
78 PRK01278 argD acetylornithine 99.9 1.9E-25 4.1E-30 196.9 12.4 129 90-223 174-314 (389)
79 PRK02936 argD acetylornithine 99.9 1.4E-24 3E-29 190.6 12.6 128 90-222 166-305 (377)
80 PRK04260 acetylornithine amino 99.9 2.5E-24 5.4E-29 189.0 12.8 129 90-223 164-304 (375)
81 PRK05093 argD bifunctional N-s 99.9 6.1E-24 1.3E-28 188.3 13.0 129 90-223 183-323 (403)
82 PRK00854 rocD ornithine--oxo-a 99.9 5.5E-23 1.2E-27 181.9 14.7 129 90-223 186-327 (401)
83 PTZ00125 ornithine aminotransf 99.9 6.4E-23 1.4E-27 181.2 13.0 139 75-223 167-318 (400)
84 cd00610 OAT_like Acetyl ornith 99.9 1.3E-22 2.9E-27 179.6 14.8 144 74-223 177-332 (413)
85 PRK02627 acetylornithine amino 99.9 1.9E-22 4.2E-27 177.8 12.4 129 90-223 181-321 (396)
86 TIGR00707 argD acetylornithine 99.7 2.4E-17 5.3E-22 144.4 12.9 128 91-223 170-309 (379)
87 PLN02822 serine palmitoyltrans 99.6 3.2E-15 6.8E-20 135.4 11.7 121 93-223 247-387 (481)
88 PLN03227 serine palmitoyltrans 99.6 1.8E-14 3.8E-19 127.5 12.4 125 91-222 138-280 (392)
89 COG0156 BioF 7-keto-8-aminopel 99.5 1.1E-13 2.3E-18 121.3 13.3 141 75-223 155-313 (388)
90 PRK09064 5-aminolevulinate syn 99.5 7.6E-14 1.6E-18 123.8 12.2 139 76-224 165-320 (407)
91 PLN02955 8-amino-7-oxononanoat 99.5 1.5E-13 3.2E-18 123.1 10.8 134 75-219 236-386 (476)
92 TIGR01821 5aminolev_synth 5-am 99.5 3E-13 6.6E-18 119.8 12.4 139 76-224 164-319 (402)
93 PRK13393 5-aminolevulinate syn 99.5 4.9E-13 1.1E-17 118.7 12.4 138 76-223 164-318 (406)
94 PRK07505 hypothetical protein; 99.2 6E-11 1.3E-15 105.2 10.7 112 90-209 179-308 (402)
95 PRK07179 hypothetical protein; 99.1 8.3E-10 1.8E-14 98.1 12.6 137 75-224 170-323 (407)
96 KOG1359|consensus 99.1 7.1E-10 1.5E-14 92.3 11.1 131 88-224 190-336 (417)
97 PRK13392 5-aminolevulinate syn 99.1 9.9E-10 2.1E-14 97.7 11.9 142 76-224 165-320 (410)
98 PRK05958 8-amino-7-oxononanoat 99.0 5.8E-09 1.2E-13 91.4 12.9 142 75-223 155-310 (385)
99 KOG1360|consensus 99.0 4.8E-09 1E-13 90.7 11.3 142 75-224 289-447 (570)
100 PRK05937 8-amino-7-oxononanoat 99.0 5.9E-09 1.3E-13 91.6 11.8 143 75-222 127-283 (370)
101 TIGR01825 gly_Cac_T_rel pyrido 98.9 1.8E-08 3.9E-13 88.5 12.8 140 76-223 150-304 (385)
102 PLN02483 serine palmitoyltrans 98.9 1.5E-08 3.3E-13 92.2 12.6 126 92-224 241-389 (489)
103 TIGR01822 2am3keto_CoA 2-amino 98.9 3.9E-08 8.6E-13 86.6 12.8 145 76-223 155-312 (393)
104 PRK06939 2-amino-3-ketobutyrat 98.8 6.5E-08 1.4E-12 85.1 13.1 143 76-223 159-316 (397)
105 COG0160 GabT 4-aminobutyrate a 98.7 2.4E-08 5.2E-13 89.0 4.7 81 2-84 362-445 (447)
106 KOG1403|consensus 98.6 2.3E-08 4.9E-13 83.8 3.8 42 2-43 353-394 (452)
107 TIGR00858 bioF 8-amino-7-oxono 98.6 5.3E-07 1.2E-11 78.1 11.7 140 76-223 133-288 (360)
108 PRK03317 histidinol-phosphate 98.6 3.3E-07 7.1E-12 80.3 9.8 125 92-223 161-298 (368)
109 cd06454 KBL_like KBL_like; thi 98.4 5.4E-06 1.2E-10 71.6 12.6 144 76-223 118-273 (349)
110 KOG1357|consensus 98.4 2.2E-06 4.7E-11 75.4 9.7 142 75-224 253-425 (519)
111 cd00609 AAT_like Aspartate ami 98.3 4.9E-06 1.1E-10 71.4 10.8 130 89-223 130-278 (350)
112 cd00613 GDC-P Glycine cleavage 98.2 1.7E-05 3.7E-10 69.9 10.8 119 90-223 158-327 (398)
113 COG0161 BioA Adenosylmethionin 98.0 1.3E-05 2.9E-10 71.4 6.3 31 2-32 362-392 (449)
114 KOG1404|consensus 97.9 3.9E-06 8.4E-11 72.7 2.0 37 3-39 355-392 (442)
115 PRK09331 Sep-tRNA:Cys-tRNA syn 97.9 0.00025 5.4E-09 62.7 11.9 144 75-223 141-299 (387)
116 PRK05965 hypothetical protein; 97.6 9.6E-05 2.1E-09 67.0 5.5 87 2-90 363-453 (459)
117 PRK08153 histidinol-phosphate 97.6 0.00056 1.2E-08 60.0 10.0 119 91-222 155-292 (369)
118 TIGR03576 pyridox_MJ0158 pyrid 97.6 0.00044 9.6E-09 60.4 9.2 76 144-222 195-272 (346)
119 PRK08742 adenosylmethionine--8 97.5 0.00011 2.4E-09 66.8 5.0 81 2-84 384-467 (472)
120 cd00614 CGS_like CGS_like: Cys 97.5 0.00026 5.6E-09 62.2 7.2 122 91-222 125-256 (369)
121 KOG1358|consensus 97.5 0.00013 2.9E-09 63.4 5.0 125 92-222 234-374 (467)
122 TIGR02539 SepCysS Sep-tRNA:Cys 97.4 0.002 4.3E-08 56.6 11.5 143 75-224 129-288 (370)
123 PRK13580 serine hydroxymethylt 97.4 0.002 4.4E-08 58.6 11.6 139 75-224 209-359 (493)
124 PRK06108 aspartate aminotransf 97.4 0.0015 3.3E-08 57.2 10.6 129 91-223 158-305 (382)
125 PRK02731 histidinol-phosphate 97.4 0.0013 2.9E-08 57.3 10.1 127 91-223 154-295 (367)
126 PRK07682 hypothetical protein; 97.4 0.0016 3.4E-08 57.2 10.6 128 91-223 154-299 (378)
127 PRK06916 adenosylmethionine--8 97.4 0.00027 5.9E-09 64.0 5.4 82 2-85 372-456 (460)
128 TIGR03301 PhnW-AepZ 2-aminoeth 97.4 0.003 6.6E-08 54.5 11.6 138 75-224 113-279 (355)
129 PLN02721 threonine aldolase 97.3 0.0031 6.7E-08 54.5 11.3 138 75-223 120-277 (353)
130 PRK06225 aspartate aminotransf 97.3 0.0021 4.5E-08 56.5 10.3 124 91-222 157-296 (380)
131 PRK06082 4-aminobutyrate amino 97.3 0.00031 6.7E-09 63.7 4.8 81 3-85 371-452 (459)
132 PRK07483 hypothetical protein; 97.2 0.00046 9.9E-09 62.3 5.3 82 2-85 346-438 (443)
133 PLN03226 serine hydroxymethylt 97.2 0.0052 1.1E-07 56.0 12.0 137 75-224 172-334 (475)
134 PRK06105 aminotransferase; Pro 97.2 0.00045 9.8E-09 62.6 5.1 82 2-85 366-450 (460)
135 PRK07030 adenosylmethionine--8 97.2 0.00051 1.1E-08 62.4 5.1 82 2-85 363-447 (466)
136 cd06502 TA_like Low-specificit 97.2 0.0027 5.8E-08 54.5 9.2 80 143-224 186-268 (338)
137 cd06451 AGAT_like Alanine-glyo 97.2 0.0066 1.4E-07 52.7 11.6 126 91-224 124-279 (356)
138 PRK03321 putative aminotransfe 97.2 0.0029 6.2E-08 55.0 9.3 103 91-199 145-261 (352)
139 PRK07480 putative aminotransfe 97.2 0.0006 1.3E-08 61.8 5.1 82 2-85 365-449 (456)
140 PRK06917 hypothetical protein; 97.2 0.00078 1.7E-08 60.9 5.8 81 3-85 347-438 (447)
141 TIGR01814 kynureninase kynuren 97.1 0.0067 1.4E-07 53.9 11.7 138 75-222 158-327 (406)
142 PRK06149 hypothetical protein; 97.1 0.00056 1.2E-08 67.5 4.8 79 3-83 888-969 (972)
143 PRK13238 tnaA tryptophanase/L- 97.1 0.0087 1.9E-07 54.3 12.1 145 75-224 163-336 (460)
144 PRK07482 hypothetical protein; 97.1 0.00079 1.7E-08 61.1 5.3 81 2-84 369-454 (461)
145 TIGR02326 transamin_PhnW 2-ami 97.1 0.012 2.6E-07 51.2 12.7 138 75-224 117-284 (363)
146 TIGR01141 hisC histidinol-phos 97.1 0.004 8.7E-08 53.8 9.3 125 90-223 141-280 (346)
147 PRK07036 hypothetical protein; 97.1 0.0009 1.9E-08 60.8 5.4 81 2-84 369-452 (466)
148 cd06453 SufS_like Cysteine des 97.1 0.0086 1.9E-07 52.3 11.5 125 91-223 139-294 (373)
149 PRK08593 4-aminobutyrate amino 97.0 0.00098 2.1E-08 60.2 5.4 81 3-85 349-430 (445)
150 PRK06062 hypothetical protein; 97.0 0.001 2.3E-08 60.1 5.4 81 3-85 360-446 (451)
151 PRK03158 histidinol-phosphate 97.0 0.0052 1.1E-07 53.5 9.5 103 91-198 151-266 (359)
152 PRK13520 L-tyrosine decarboxyl 97.0 0.011 2.4E-07 51.5 11.4 136 75-224 141-303 (371)
153 PRK07777 aminotransferase; Val 97.0 0.008 1.7E-07 52.9 10.4 129 91-223 159-305 (387)
154 PRK06148 hypothetical protein; 96.9 0.00093 2E-08 66.1 4.5 80 3-84 928-1010(1013)
155 PRK13034 serine hydroxymethylt 96.9 0.0054 1.2E-07 54.9 9.0 134 75-224 157-306 (416)
156 PRK07481 hypothetical protein; 96.9 0.0013 2.8E-08 59.5 5.0 80 3-84 363-445 (449)
157 PRK07678 aminotransferase; Val 96.9 0.0012 2.5E-08 59.8 4.6 81 2-84 361-449 (451)
158 PF00155 Aminotran_1_2: Aminot 96.9 0.0095 2.1E-07 51.7 10.2 142 75-223 132-295 (363)
159 TIGR00709 dat 2,4-diaminobutyr 96.9 0.0014 3.1E-08 59.1 4.9 80 3-84 347-435 (442)
160 PRK08360 4-aminobutyrate amino 96.8 0.0017 3.7E-08 58.6 5.2 81 3-85 346-427 (443)
161 PLN02760 4-aminobutyrate:pyruv 96.8 0.0016 3.5E-08 59.7 5.0 82 2-85 408-492 (504)
162 TIGR01140 L_thr_O3P_dcar L-thr 96.8 0.014 3.1E-07 50.3 10.5 72 148-223 191-264 (330)
163 PRK06943 adenosylmethionine--8 96.8 0.0016 3.4E-08 59.0 4.6 79 2-85 369-447 (453)
164 TIGR01976 am_tr_V_VC1184 cyste 96.7 0.023 5E-07 50.0 11.4 123 91-223 156-313 (397)
165 PRK12403 putative aminotransfe 96.7 0.0024 5.2E-08 58.0 5.1 82 2-85 369-453 (460)
166 TIGR01325 O_suc_HS_sulf O-succ 96.7 0.0081 1.8E-07 53.1 8.1 119 91-217 139-268 (380)
167 PTZ00094 serine hydroxymethylt 96.6 0.024 5.3E-07 51.2 11.0 138 75-224 171-323 (452)
168 PRK06938 diaminobutyrate--2-ox 96.6 0.0025 5.5E-08 57.8 4.7 25 3-27 372-396 (464)
169 PRK13479 2-aminoethylphosphona 96.6 0.051 1.1E-06 47.4 12.7 139 75-224 119-285 (368)
170 PRK06931 diaminobutyrate--2-ox 96.6 0.0029 6.2E-08 57.4 4.8 81 3-85 366-455 (459)
171 PLN02974 adenosylmethionine-8- 96.6 0.0025 5.4E-08 61.6 4.4 26 2-27 737-762 (817)
172 PRK00950 histidinol-phosphate 96.5 0.018 4E-07 50.0 9.3 100 91-198 158-267 (361)
173 cd06452 SepCysS Sep-tRNA:Cys-t 96.5 0.056 1.2E-06 47.1 12.3 144 75-223 122-280 (361)
174 PF00266 Aminotran_5: Aminotra 96.5 0.061 1.3E-06 47.0 12.4 136 75-224 129-295 (371)
175 PRK05764 aspartate aminotransf 96.5 0.04 8.6E-07 48.5 11.2 74 148-223 235-311 (393)
176 TIGR03812 tyr_de_CO2_Arch tyro 96.5 0.048 1E-06 47.5 11.5 132 91-224 154-308 (373)
177 PLN00175 aminotransferase fami 96.4 0.036 7.9E-07 49.5 10.8 128 91-223 187-332 (413)
178 PRK05639 4-aminobutyrate amino 96.4 0.0043 9.4E-08 56.2 4.9 80 2-85 362-444 (457)
179 PRK07550 hypothetical protein; 96.3 0.038 8.2E-07 48.7 9.9 75 146-222 231-308 (386)
180 TIGR03235 DNA_S_dndA cysteine 96.3 0.027 5.9E-07 48.9 8.9 126 91-224 138-281 (353)
181 cd00616 AHBA_syn 3-amino-5-hyd 96.3 0.042 9.2E-07 47.4 10.1 121 90-223 105-251 (352)
182 COG4992 ArgD Ornithine/acetylo 96.3 0.0075 1.6E-07 53.2 5.3 73 3-85 326-399 (404)
183 PRK06541 hypothetical protein; 96.2 0.0081 1.8E-07 54.5 5.4 80 3-84 367-455 (460)
184 TIGR02006 IscS cysteine desulf 96.2 0.031 6.7E-07 49.6 8.9 124 91-223 142-282 (402)
185 PRK06058 4-aminobutyrate amino 96.2 0.0069 1.5E-07 54.7 4.7 78 3-83 361-441 (443)
186 PRK04013 argD acetylornithine/ 96.2 0.0068 1.5E-07 53.4 4.4 70 4-85 291-361 (364)
187 PRK09295 bifunctional cysteine 96.1 0.059 1.3E-06 47.8 10.3 124 91-223 164-320 (406)
188 TIGR03392 FeS_syn_CsdA cystein 96.1 0.085 1.8E-06 46.6 11.1 124 91-223 157-312 (398)
189 PRK07324 transaminase; Validat 96.1 0.037 7.9E-07 48.7 8.7 73 147-221 218-293 (373)
190 KOG1368|consensus 96.1 0.042 9.2E-07 46.7 8.4 143 74-221 135-292 (384)
191 TIGR01328 met_gam_lyase methio 95.9 0.037 7.9E-07 49.2 8.0 124 91-222 144-276 (391)
192 TIGR01977 am_tr_V_EF2568 cyste 95.9 0.088 1.9E-06 45.9 10.1 126 91-223 137-289 (376)
193 PRK05630 adenosylmethionine--8 95.8 0.011 2.4E-07 53.1 4.3 22 2-23 348-369 (422)
194 PRK02948 cysteine desulfurase; 95.8 0.054 1.2E-06 47.5 8.5 125 91-224 138-277 (381)
195 TIGR01979 sufS cysteine desulf 95.7 0.11 2.4E-06 45.8 10.3 124 91-223 159-314 (403)
196 PRK06959 putative threonine-ph 95.7 0.028 6.2E-07 48.8 6.4 73 148-224 195-269 (339)
197 PRK05769 4-aminobutyrate amino 95.7 0.014 3.1E-07 52.7 4.5 77 3-83 361-438 (441)
198 PRK14809 histidinol-phosphate 95.7 0.077 1.7E-06 46.2 9.0 101 92-198 155-266 (357)
199 PRK06348 aspartate aminotransf 95.7 0.14 3.1E-06 45.0 10.7 73 148-222 231-306 (384)
200 PRK13360 omega amino acid--pyr 95.6 0.018 4E-07 51.9 5.0 77 3-84 364-440 (442)
201 PRK07495 4-aminobutyrate amino 95.6 0.019 4.2E-07 51.6 5.0 80 3-85 340-422 (425)
202 PRK09221 beta alanine--pyruvat 95.6 0.022 4.8E-07 51.5 5.4 78 2-84 366-443 (445)
203 PRK07309 aromatic amino acid a 95.6 0.15 3.3E-06 45.0 10.5 74 148-223 234-310 (391)
204 cd00378 SHMT Serine-glycine hy 95.5 0.23 4.9E-06 43.9 11.6 78 144-224 215-299 (402)
205 PRK07986 adenosylmethionine--8 95.4 0.02 4.4E-07 51.4 4.3 72 2-83 351-422 (428)
206 PRK00011 glyA serine hydroxyme 95.4 0.36 7.8E-06 42.9 12.2 78 144-224 219-303 (416)
207 PRK02769 histidine decarboxyla 95.3 0.29 6.2E-06 43.4 11.2 143 75-224 147-312 (380)
208 PRK06460 hypothetical protein; 95.3 0.18 4E-06 44.5 10.0 123 90-222 129-260 (376)
209 PRK06767 methionine gamma-lyas 95.3 0.068 1.5E-06 47.3 7.3 123 91-222 146-277 (386)
210 PRK05664 threonine-phosphate d 95.2 0.068 1.5E-06 46.1 7.0 72 148-223 189-262 (330)
211 PLN02651 cysteine desulfurase 95.1 0.14 3.1E-06 44.7 8.8 123 91-222 138-277 (364)
212 PRK07568 aspartate aminotransf 95.1 0.25 5.5E-06 43.5 10.4 72 148-222 232-307 (397)
213 PLN03026 histidinol-phosphate 95.1 0.2 4.4E-06 44.1 9.7 124 91-223 175-310 (380)
214 PRK08175 aminotransferase; Val 95.1 0.3 6.5E-06 43.2 10.8 75 147-223 233-310 (395)
215 PRK07503 methionine gamma-lyas 95.0 0.13 2.8E-06 45.9 8.3 121 91-217 150-281 (403)
216 PRK06234 methionine gamma-lyas 95.0 0.13 2.8E-06 45.9 8.3 123 91-221 149-282 (400)
217 PRK04612 argD acetylornithine 95.0 0.037 8E-07 49.5 4.7 74 3-84 329-403 (408)
218 TIGR01324 cysta_beta_ly_B cyst 95.0 0.12 2.6E-06 45.8 7.8 120 91-218 135-265 (377)
219 PRK11522 putrescine--2-oxoglut 94.9 0.028 6E-07 51.1 3.9 73 3-85 376-452 (459)
220 PRK14807 histidinol-phosphate 94.9 0.35 7.6E-06 42.0 10.6 122 91-222 148-281 (351)
221 PLN02242 methionine gamma-lyas 94.8 0.13 2.9E-06 46.1 7.9 120 91-223 163-297 (418)
222 TIGR03402 FeS_nifS cysteine de 94.8 0.21 4.5E-06 43.7 9.0 121 91-222 136-273 (379)
223 PRK06918 4-aminobutyrate amino 94.8 0.046 9.9E-07 49.5 4.9 81 3-85 361-444 (451)
224 PRK09082 methionine aminotrans 94.8 0.29 6.3E-06 43.1 9.9 74 148-223 233-309 (386)
225 PLN02409 serine--glyoxylate am 94.8 0.37 8E-06 42.8 10.6 139 75-224 123-293 (401)
226 PRK08960 hypothetical protein; 94.7 0.32 7E-06 42.8 10.0 79 142-222 222-307 (387)
227 PRK05942 aspartate aminotransf 94.6 0.32 7E-06 42.9 9.7 76 146-223 238-316 (394)
228 PRK10874 cysteine sulfinate de 94.4 0.35 7.5E-06 42.7 9.6 124 91-223 160-315 (401)
229 PRK09792 4-aminobutyrate trans 94.4 0.051 1.1E-06 48.7 4.3 21 3-23 340-360 (421)
230 PRK07504 O-succinylhomoserine 94.4 0.17 3.7E-06 45.0 7.6 123 90-221 149-280 (398)
231 TIGR02618 tyr_phenol_ly tyrosi 94.4 0.55 1.2E-05 42.4 10.7 147 75-224 156-329 (450)
232 PRK04781 histidinol-phosphate 94.3 0.48 1E-05 41.5 10.1 72 148-223 217-292 (364)
233 TIGR02617 tnaA_trp_ase tryptop 94.2 1 2.3E-05 40.7 12.0 146 75-224 169-345 (467)
234 PRK09276 LL-diaminopimelate am 94.2 0.31 6.8E-06 42.8 8.8 76 146-223 234-312 (385)
235 PRK08912 hypothetical protein; 94.2 0.1 2.2E-06 46.0 5.6 74 148-223 229-305 (387)
236 COG0079 HisC Histidinol-phosph 94.2 0.11 2.3E-06 45.7 5.6 72 148-223 209-282 (356)
237 PRK08249 cystathionine gamma-s 94.1 0.31 6.7E-06 43.4 8.6 121 91-221 149-278 (398)
238 TIGR03372 putres_am_tran putre 94.1 0.04 8.8E-07 49.8 3.0 22 3-24 369-391 (442)
239 PRK07049 methionine gamma-lyas 94.1 0.39 8.4E-06 43.2 9.2 126 90-221 173-309 (427)
240 PRK08117 4-aminobutyrate amino 94.1 0.092 2E-06 47.2 5.2 79 3-85 349-430 (433)
241 PRK08361 aspartate aminotransf 94.1 0.3 6.5E-06 43.0 8.4 73 148-222 234-311 (391)
242 PLN02855 Bifunctional selenocy 94.0 0.84 1.8E-05 40.7 11.2 124 91-223 173-328 (424)
243 PRK05387 histidinol-phosphate 94.0 0.13 2.8E-06 44.5 5.7 75 148-223 207-283 (353)
244 PRK14808 histidinol-phosphate 93.9 0.18 4E-06 43.6 6.5 72 148-223 199-272 (335)
245 PRK06173 adenosylmethionine--8 93.6 0.12 2.6E-06 46.6 5.0 72 3-84 354-425 (429)
246 cd00615 Orn_deC_like Ornithine 93.6 0.17 3.8E-06 42.9 5.7 137 75-222 142-294 (294)
247 PRK10534 L-threonine aldolase; 93.5 0.16 3.4E-06 43.7 5.4 75 146-224 192-267 (333)
248 PRK08133 O-succinylhomoserine 93.4 0.37 8.1E-06 42.7 7.8 119 91-217 146-275 (390)
249 PRK06777 4-aminobutyrate amino 93.3 0.13 2.7E-06 46.2 4.7 77 3-82 340-419 (421)
250 TIGR03537 DapC succinyldiamino 93.3 0.88 1.9E-05 39.4 9.9 74 148-223 203-278 (350)
251 TIGR00700 GABAtrnsam 4-aminobu 93.3 0.12 2.6E-06 46.3 4.5 48 3-51 339-386 (420)
252 cd01494 AAT_I Aspartate aminot 93.3 0.18 3.9E-06 38.0 4.9 72 88-165 89-170 (170)
253 PRK08088 4-aminobutyrate amino 93.1 0.13 2.8E-06 46.1 4.5 79 3-83 341-422 (425)
254 PRK01688 histidinol-phosphate 93.1 0.16 3.5E-06 44.1 5.0 72 148-223 210-285 (351)
255 PRK00451 glycine dehydrogenase 93.0 1.3 2.9E-05 39.7 10.8 128 90-223 203-371 (447)
256 PRK07810 O-succinylhomoserine 92.9 0.58 1.3E-05 41.7 8.2 119 91-217 155-285 (403)
257 PRK05964 adenosylmethionine--8 92.8 0.14 3.1E-06 45.8 4.3 74 3-83 348-421 (423)
258 PRK04311 selenocysteine syntha 92.5 0.99 2.1E-05 41.1 9.2 104 91-200 216-339 (464)
259 PRK08574 cystathionine gamma-s 92.4 0.63 1.4E-05 41.2 7.8 117 91-221 137-267 (385)
260 PRK14012 cysteine desulfurase; 92.4 0.86 1.9E-05 40.4 8.6 123 91-222 144-283 (404)
261 PRK06425 histidinol-phosphate 92.4 0.44 9.5E-06 41.1 6.6 71 148-223 190-262 (332)
262 PRK07392 threonine-phosphate d 92.3 0.37 8E-06 42.0 6.2 71 148-222 213-285 (360)
263 TIGR03403 nifS_epsilon cystein 92.3 1.4 3.1E-05 38.5 9.9 123 91-223 140-278 (382)
264 PLN02414 glycine dehydrogenase 92.1 1.8 3.8E-05 43.2 11.0 141 75-222 653-824 (993)
265 COG0075 Serine-pyruvate aminot 92.0 3.7 8E-05 36.5 11.9 139 75-224 119-285 (383)
266 PRK05957 aspartate aminotransf 91.9 1.5 3.4E-05 38.6 9.7 75 146-222 228-305 (389)
267 PRK09105 putative aminotransfe 91.9 0.52 1.1E-05 41.4 6.7 75 144-223 223-302 (370)
268 PRK07337 aminotransferase; Val 91.9 1.8 3.9E-05 38.0 10.1 78 144-223 222-306 (388)
269 PRK08636 aspartate aminotransf 91.9 2.9 6.3E-05 37.0 11.5 73 148-222 245-320 (403)
270 TIGR03540 DapC_direct LL-diami 91.7 0.37 8E-06 42.3 5.5 76 146-223 232-310 (383)
271 PRK12414 putative aminotransfe 91.7 0.33 7.1E-06 42.8 5.1 74 148-223 232-307 (384)
272 TIGR01437 selA_rel uncharacter 91.6 2.4 5.2E-05 37.2 10.5 79 144-223 200-282 (363)
273 PRK15481 transcriptional regul 91.6 0.44 9.6E-06 42.6 6.0 73 148-222 279-355 (431)
274 PRK01533 histidinol-phosphate 91.4 0.32 6.8E-06 42.7 4.7 71 148-222 219-291 (366)
275 PRK04635 histidinol-phosphate 91.3 0.37 8E-06 41.9 5.0 72 148-223 211-286 (354)
276 PRK07681 aspartate aminotransf 91.3 0.52 1.1E-05 41.7 6.0 75 147-223 235-312 (399)
277 PRK13237 tyrosine phenol-lyase 91.3 6.2 0.00013 35.9 12.7 146 75-224 163-336 (460)
278 PRK09148 aminotransferase; Val 91.2 0.45 9.8E-06 42.3 5.6 75 147-223 234-311 (405)
279 cd00617 Tnase_like Tryptophana 91.2 1.7 3.7E-05 39.2 9.2 43 75-120 138-181 (431)
280 TIGR02080 O_succ_thio_ly O-suc 91.1 1.4 3E-05 39.0 8.5 119 91-217 136-266 (382)
281 cd06450 DOPA_deC_like DOPA dec 91.0 2.6 5.6E-05 36.1 9.9 122 75-223 132-267 (345)
282 TIGR00474 selA seryl-tRNA(sec) 90.9 1.4 3E-05 40.1 8.4 104 91-200 211-334 (454)
283 PLN00144 acetylornithine trans 90.9 0.33 7.1E-06 42.9 4.3 20 2-21 308-327 (382)
284 PRK06084 O-acetylhomoserine am 90.8 1.4 3.1E-05 39.6 8.4 69 91-165 143-219 (425)
285 PRK06207 aspartate aminotransf 90.8 3.8 8.2E-05 36.4 11.0 73 148-222 248-323 (405)
286 PLN02509 cystathionine beta-ly 90.7 2 4.3E-05 39.2 9.2 121 91-221 217-347 (464)
287 PRK06290 aspartate aminotransf 90.6 0.56 1.2E-05 41.9 5.5 75 147-223 247-323 (410)
288 TIGR00508 bioA adenosylmethion 90.5 0.33 7.2E-06 43.6 4.1 20 3-22 355-374 (427)
289 TIGR00699 GABAtrns_euk 4-amino 90.3 0.21 4.5E-06 45.5 2.6 19 3-21 391-412 (464)
290 PRK08068 transaminase; Reviewe 90.1 0.66 1.4E-05 40.8 5.5 75 147-223 236-313 (389)
291 PRK07683 aminotransferase A; V 90.1 0.84 1.8E-05 40.2 6.2 73 148-222 230-305 (387)
292 COG0520 csdA Selenocysteine ly 89.9 2.6 5.7E-05 37.7 9.2 130 90-223 161-319 (405)
293 PRK08297 L-lysine aminotransfe 89.7 0.4 8.7E-06 43.3 3.9 20 3-22 368-388 (443)
294 PRK07366 succinyldiaminopimela 89.5 0.81 1.8E-05 40.2 5.7 74 148-223 236-312 (388)
295 PRK05994 O-acetylhomoserine am 89.5 1.6 3.5E-05 39.2 7.6 65 91-164 148-223 (427)
296 PRK03967 histidinol-phosphate 89.4 0.94 2E-05 39.1 5.8 71 148-222 201-273 (337)
297 TIGR02379 ECA_wecE TDP-4-keto- 89.3 4 8.7E-05 36.0 9.9 119 91-221 119-269 (376)
298 PRK08776 cystathionine gamma-s 89.3 2.8 6.1E-05 37.4 9.0 121 91-221 145-275 (405)
299 PRK05166 histidinol-phosphate 89.3 0.88 1.9E-05 39.8 5.7 71 148-222 228-301 (371)
300 PRK07811 cystathionine gamma-s 88.8 2.3 4.9E-05 37.7 8.0 121 91-221 146-276 (388)
301 TIGR03799 NOD_PanD_pyr putativ 88.7 9.8 0.00021 35.3 12.2 143 75-223 249-419 (522)
302 PRK03715 argD acetylornithine 88.7 0.91 2E-05 40.4 5.4 20 3-23 320-339 (395)
303 PRK07908 hypothetical protein; 88.3 1.8 3.9E-05 37.4 6.9 71 148-222 201-275 (349)
304 PRK07582 cystathionine gamma-l 87.6 2.7 5.9E-05 36.9 7.6 121 91-221 132-262 (366)
305 PRK07050 cystathionine beta-ly 87.4 2.1 4.6E-05 38.0 6.9 55 144-200 202-261 (394)
306 PRK05968 hypothetical protein; 87.4 1.8 3.9E-05 38.4 6.4 123 91-222 147-278 (389)
307 PRK08045 cystathionine gamma-s 87.3 3.5 7.7E-05 36.5 8.2 120 91-218 137-268 (386)
308 PRK06107 aspartate aminotransf 87.3 6.3 0.00014 34.9 9.9 73 148-222 238-313 (402)
309 KOG1402|consensus 87.0 1.3 2.8E-05 38.4 5.0 24 4-27 351-375 (427)
310 TIGR03539 DapC_actino succinyl 86.9 1.5 3.2E-05 38.2 5.5 130 90-222 141-288 (357)
311 PRK00062 glutamate-1-semialdeh 86.6 1.1 2.3E-05 40.3 4.5 22 3-24 341-362 (426)
312 PRK12381 bifunctional succinyl 86.4 1.2 2.5E-05 39.7 4.7 75 3-85 325-400 (406)
313 PRK07865 N-succinyldiaminopime 86.1 1.6 3.5E-05 38.0 5.4 74 148-223 220-295 (364)
314 PRK12566 glycine dehydrogenase 85.5 8.5 0.00018 38.2 10.3 140 75-222 628-793 (954)
315 PRK11658 UDP-4-amino-4-deoxy-L 85.5 8.6 0.00019 33.8 9.7 76 145-223 174-274 (379)
316 PF01212 Beta_elim_lyase: Beta 85.0 0.57 1.2E-05 39.9 2.0 146 75-224 108-271 (290)
317 PRK08247 cystathionine gamma-s 84.9 4 8.7E-05 35.8 7.3 75 144-222 188-267 (366)
318 PRK04366 glycine dehydrogenase 84.8 9.4 0.0002 34.9 9.9 80 144-223 262-368 (481)
319 PRK11706 TDP-4-oxo-6-deoxy-D-g 84.6 7.6 0.00016 34.1 8.9 77 144-222 170-269 (375)
320 COG2008 GLY1 Threonine aldolas 84.2 9.4 0.0002 33.3 8.9 144 75-221 114-269 (342)
321 TIGR03251 LAT_fam L-lysine 6-t 84.0 0.89 1.9E-05 40.9 2.8 20 3-22 361-381 (431)
322 PLN03032 serine decarboxylase; 83.9 18 0.0004 32.0 11.0 139 75-223 148-314 (374)
323 PRK09147 succinyldiaminopimela 83.8 2.6 5.6E-05 37.2 5.6 48 148-197 242-290 (396)
324 PRK06358 threonine-phosphate d 83.6 3.2 6.9E-05 36.1 6.1 72 148-223 210-284 (354)
325 PRK05367 glycine dehydrogenase 83.6 6.6 0.00014 39.2 8.8 141 75-222 627-792 (954)
326 TIGR03246 arg_catab_astC succi 83.6 1.8 4E-05 38.3 4.6 21 3-23 321-341 (397)
327 PRK07269 cystathionine gamma-s 83.5 5.2 0.00011 35.2 7.4 119 91-217 136-266 (364)
328 PRK08056 threonine-phosphate d 83.2 3.4 7.4E-05 35.8 6.1 72 148-223 209-283 (356)
329 TIGR00461 gcvP glycine dehydro 82.7 16 0.00034 36.4 10.9 140 75-222 615-784 (939)
330 PLN02607 1-aminocyclopropane-1 82.1 20 0.00044 32.4 10.9 26 148-173 276-303 (447)
331 PLN02368 alanine transaminase 82.1 4.1 9E-05 36.4 6.3 73 148-223 288-377 (407)
332 PRK04870 histidinol-phosphate 81.4 3.1 6.8E-05 36.0 5.2 71 148-223 215-287 (356)
333 COG1103 Archaea-specific pyrid 81.3 33 0.00071 29.3 10.7 111 72-190 140-266 (382)
334 PRK05355 3-phosphoserine/phosp 81.3 7.9 0.00017 33.9 7.7 78 145-224 188-282 (360)
335 TIGR03588 PseC UDP-4-keto-6-de 81.3 24 0.00051 30.9 10.8 39 183-223 240-278 (380)
336 COG0436 Aspartate/tyrosine/aro 81.1 24 0.00051 31.4 10.7 125 91-223 163-312 (393)
337 TIGR03538 DapC_gpp succinyldia 81.0 3.2 7E-05 36.5 5.2 49 148-198 241-290 (393)
338 PRK02610 histidinol-phosphate 80.9 4.9 0.00011 35.2 6.3 112 75-199 154-279 (374)
339 PRK08114 cystathionine beta-ly 80.1 7 0.00015 34.9 7.0 120 91-218 147-279 (395)
340 TIGR02407 ectoine_ectB diamino 79.9 1.9 4E-05 38.6 3.3 21 3-23 337-358 (412)
341 PLN02724 Molybdenum cofactor s 79.7 6.9 0.00015 38.3 7.3 129 91-223 192-359 (805)
342 TIGR01326 OAH_OAS_sulfhy OAH/O 79.5 8.9 0.00019 34.3 7.6 70 91-166 142-219 (418)
343 PRK07590 L,L-diaminopimelate a 79.5 6.2 0.00014 35.0 6.5 75 148-222 246-334 (409)
344 PRK05967 cystathionine beta-ly 79.2 8.1 0.00018 34.5 7.1 120 91-218 149-279 (395)
345 PF03841 SelA: L-seryl-tRNA se 78.8 1.8 3.9E-05 38.0 2.8 56 144-202 204-261 (367)
346 COG1921 SelA Selenocysteine sy 78.7 3.2 7E-05 36.8 4.3 59 142-203 212-272 (395)
347 PRK08861 cystathionine gamma-s 78.7 9.2 0.0002 34.0 7.3 120 91-218 138-269 (388)
348 PRK15407 lipopolysaccharide bi 78.2 28 0.00062 31.4 10.4 40 181-222 288-327 (438)
349 KOG0633|consensus 77.7 4.4 9.5E-05 34.2 4.6 52 143-198 216-271 (375)
350 PLN02376 1-aminocyclopropane-1 77.6 49 0.0011 30.4 11.9 26 148-173 276-303 (496)
351 PF01041 DegT_DnrJ_EryC1: DegT 77.1 21 0.00046 31.1 9.1 131 75-223 103-260 (363)
352 PRK03244 argD acetylornithine 76.9 3.9 8.5E-05 36.0 4.5 70 4-84 324-394 (398)
353 TIGR01329 cysta_beta_ly_E cyst 76.8 13 0.00027 32.9 7.6 120 90-217 130-261 (378)
354 PRK07812 O-acetylhomoserine am 76.6 16 0.00034 33.1 8.3 31 90-120 154-184 (436)
355 PRK06176 cystathionine gamma-s 76.5 11 0.00024 33.3 7.1 121 90-218 133-265 (380)
356 PRK09028 cystathionine beta-ly 76.3 6.8 0.00015 34.9 5.8 121 90-218 145-276 (394)
357 PRK09264 diaminobutyrate--2-ox 76.2 3.9 8.4E-05 36.7 4.2 20 3-22 341-361 (425)
358 COG1104 NifS Cysteine sulfinat 76.1 23 0.0005 31.5 8.9 134 75-222 131-278 (386)
359 PRK12389 glutamate-1-semialdeh 75.9 5 0.00011 36.0 4.9 22 3-25 344-366 (428)
360 COG1167 ARO8 Transcriptional r 75.3 6.2 0.00013 35.9 5.4 50 147-198 295-344 (459)
361 PTZ00377 alanine aminotransfer 75.2 11 0.00024 34.3 7.0 73 148-223 296-385 (481)
362 PRK09440 avtA valine--pyruvate 74.8 7.2 0.00016 34.6 5.6 49 148-198 246-294 (416)
363 PTZ00376 aspartate aminotransf 73.9 8.3 0.00018 34.1 5.7 76 148-223 248-337 (404)
364 TIGR03542 DAPAT_plant LL-diami 73.4 13 0.00029 32.8 6.9 23 147-169 242-265 (402)
365 cd00611 PSAT_like Phosphoserin 73.2 16 0.00034 31.8 7.2 71 151-223 193-278 (355)
366 TIGR00713 hemL glutamate-1-sem 73.1 4.1 9E-05 36.3 3.7 22 3-24 339-360 (423)
367 PTZ00433 tyrosine aminotransfe 72.7 68 0.0015 28.4 11.8 72 148-222 246-327 (412)
368 PRK05839 hypothetical protein; 72.5 11 0.00023 33.0 6.1 48 148-197 229-277 (374)
369 PLN02452 phosphoserine transam 71.8 15 0.00032 32.4 6.7 77 145-223 194-285 (365)
370 KOG2862|consensus 71.7 31 0.00066 30.0 8.2 138 75-224 131-302 (385)
371 PLN00143 tyrosine/nicotianamin 71.6 64 0.0014 28.6 10.9 72 148-222 239-322 (409)
372 PF01053 Cys_Met_Meta_PP: Cys/ 70.8 19 0.00041 32.1 7.2 120 91-218 140-273 (386)
373 PRK06434 cystathionine gamma-l 70.0 17 0.00038 32.2 6.8 122 90-221 147-276 (384)
374 PRK06855 aminotransferase; Val 69.8 51 0.0011 29.5 9.9 47 148-197 240-295 (433)
375 PRK08363 alanine aminotransfer 69.6 8.9 0.00019 33.8 4.9 76 148-223 234-315 (398)
376 TIGR03712 acc_sec_asp2 accesso 69.3 4.4 9.4E-05 37.0 2.8 64 90-157 314-394 (511)
377 PRK08248 O-acetylhomoserine am 69.1 21 0.00046 32.2 7.2 68 91-164 149-224 (431)
378 PRK07671 cystathionine beta-ly 69.0 25 0.00055 31.0 7.6 120 91-218 134-265 (377)
379 PRK06209 glutamate-1-semialdeh 68.2 9.6 0.00021 34.3 4.9 75 3-85 332-406 (431)
380 TIGR01264 tyr_amTase_E tyrosin 67.9 85 0.0018 27.6 11.3 73 148-223 237-319 (401)
381 PRK01278 argD acetylornithine 67.0 8.3 0.00018 33.8 4.2 20 3-22 317-337 (389)
382 KOG3370|consensus 65.4 6.4 0.00014 29.6 2.6 37 87-129 101-139 (140)
383 PRK00615 glutamate-1-semialdeh 64.7 12 0.00026 33.8 4.8 75 4-84 348-428 (433)
384 PRK07046 aminotransferase; Val 64.5 10 0.00022 34.4 4.4 22 3-24 367-388 (453)
385 TIGR01364 serC_1 phosphoserine 64.5 41 0.00088 29.3 8.0 72 150-223 184-270 (349)
386 PRK08064 cystathionine beta-ly 64.3 29 0.00063 30.7 7.1 119 91-217 138-268 (390)
387 PLN02397 aspartate transaminas 64.0 22 0.00047 31.8 6.3 76 148-223 266-355 (423)
388 TIGR01366 serC_3 phosphoserine 63.3 40 0.00087 29.4 7.8 44 181-224 233-281 (361)
389 PRK03080 phosphoserine aminotr 63.0 38 0.00083 29.7 7.6 80 145-224 186-292 (378)
390 PLN02656 tyrosine transaminase 62.6 1.1E+02 0.0024 27.0 12.0 72 148-222 238-321 (409)
391 KOG0256|consensus 62.4 1.2E+02 0.0026 27.4 11.2 146 75-224 210-379 (471)
392 PLN02450 1-aminocyclopropane-1 62.2 23 0.0005 32.2 6.2 73 147-223 268-347 (468)
393 PRK08354 putative aminotransfe 60.8 27 0.00058 29.6 6.1 43 148-197 179-222 (311)
394 PF00464 SHMT: Serine hydroxym 60.0 32 0.0007 30.8 6.5 74 144-224 223-320 (399)
395 PLN02231 alanine transaminase 59.2 33 0.00073 31.9 6.8 73 148-223 348-437 (534)
396 PLN02624 ornithine-delta-amino 58.4 14 0.0003 33.8 4.1 20 3-22 367-387 (474)
397 TIGR01265 tyr_nico_aTase tyros 57.3 1.4E+02 0.0029 26.3 10.4 72 148-222 238-320 (403)
398 TIGR03531 selenium_SpcS O-phos 56.9 1.6E+02 0.0034 26.9 10.6 140 75-223 191-344 (444)
399 TIGR01365 serC_2 phosphoserine 53.3 83 0.0018 27.9 8.0 79 144-224 176-283 (374)
400 PHA02675 ORF104 fusion protein 53.3 9.9 0.00021 25.9 1.7 16 113-128 74-90 (90)
401 PRK06702 O-acetylhomoserine am 53.2 77 0.0017 28.7 7.9 36 182-217 271-308 (432)
402 PLN02880 tyrosine decarboxylas 52.4 1.6E+02 0.0035 27.0 10.0 144 75-222 223-398 (490)
403 PRK05939 hypothetical protein; 51.8 37 0.00081 30.2 5.6 69 90-164 130-206 (397)
404 cd00610 OAT_like Acetyl ornith 50.6 24 0.00053 30.9 4.3 21 4-24 336-356 (413)
405 PRK04260 acetylornithine amino 49.7 20 0.00043 31.3 3.6 19 3-21 307-325 (375)
406 PTZ00125 ornithine aminotransf 49.5 31 0.00066 30.3 4.7 75 3-85 321-396 (400)
407 PRK06836 aspartate aminotransf 48.8 24 0.00051 31.1 3.9 73 148-223 241-319 (394)
408 COG2873 MET17 O-acetylhomoseri 48.2 76 0.0017 28.3 6.7 77 90-172 146-230 (426)
409 TIGR01885 Orn_aminotrans ornit 46.8 25 0.00055 31.0 3.8 19 4-22 328-346 (401)
410 PRK02936 argD acetylornithine 45.4 21 0.00046 31.0 3.0 21 3-23 309-329 (377)
411 PRK12462 phosphoserine aminotr 44.7 1.2E+02 0.0026 26.8 7.6 78 145-223 190-284 (364)
412 PLN03227 serine palmitoyltrans 44.2 35 0.00077 30.2 4.3 24 3-26 282-313 (392)
413 PRK09257 aromatic amino acid a 44.1 78 0.0017 27.8 6.5 73 148-223 243-332 (396)
414 PRK13355 bifunctional HTH-doma 42.2 2.4E+02 0.0052 25.9 9.6 48 148-198 350-404 (517)
415 PRK08637 hypothetical protein; 42.1 73 0.0016 27.9 6.0 51 148-198 224-283 (388)
416 PRK04073 rocD ornithine--oxo-a 41.2 36 0.00078 30.0 3.9 19 4-22 328-346 (396)
417 KOG0259|consensus 40.9 2E+02 0.0044 25.8 8.1 41 73-120 187-227 (447)
418 COG2082 CobH Precorrin isomera 40.9 51 0.0011 26.8 4.3 46 156-202 160-208 (210)
419 TIGR01788 Glu-decarb-GAD gluta 39.3 2.9E+02 0.0063 24.9 10.2 142 75-223 176-345 (431)
420 COG0112 GlyA Glycine/serine hy 38.2 1.4E+02 0.003 26.8 6.8 75 144-224 220-304 (413)
421 PLN02482 glutamate-1-semialdeh 37.8 57 0.0012 29.9 4.7 73 4-83 393-472 (474)
422 PLN02672 methionine S-methyltr 37.1 52 0.0011 33.4 4.5 75 148-223 907-989 (1082)
423 PLN02187 rooty/superroot1 36.9 83 0.0018 28.5 5.6 75 148-222 273-356 (462)
424 PF06786 UPF0253: Uncharacteri 36.0 78 0.0017 20.4 3.6 34 187-220 24-58 (66)
425 COG1698 Uncharacterized protei 35.4 72 0.0016 22.2 3.7 37 187-223 54-91 (93)
426 PLN00145 tyrosine/nicotianamin 35.2 3.3E+02 0.0071 24.3 10.8 72 148-222 259-342 (430)
427 KOG0257|consensus 35.0 1E+02 0.0022 27.8 5.5 74 148-224 242-327 (420)
428 PRK05575 cbiC precorrin-8X met 33.0 58 0.0013 26.3 3.5 43 156-199 158-203 (204)
429 PF02570 CbiC: Precorrin-8X me 32.9 54 0.0012 26.4 3.2 50 142-199 144-196 (198)
430 PLN02271 serine hydroxymethylt 32.7 1E+02 0.0023 29.0 5.5 30 195-224 423-455 (586)
431 PRK08286 cbiC cobalt-precorrin 31.1 77 0.0017 25.8 3.9 46 156-202 164-212 (214)
432 PRK02627 acetylornithine amino 30.5 78 0.0017 27.6 4.3 19 3-21 324-342 (396)
433 PRK04964 hypothetical protein; 30.1 1E+02 0.0022 19.9 3.5 34 187-220 24-58 (66)
434 PRK08134 O-acetylhomoserine am 30.0 2.8E+02 0.0061 25.0 7.8 31 90-120 148-178 (433)
435 PRK05954 precorrin-8X methylmu 28.8 92 0.002 25.2 3.9 44 156-200 153-199 (203)
436 PRK06264 cbiC precorrin-8X met 28.0 96 0.0021 25.2 3.9 46 156-202 159-207 (210)
437 PF15391 DUF4614: Domain of un 27.3 3E+02 0.0065 21.8 6.5 69 142-221 85-159 (181)
438 PRK05613 O-acetylhomoserine am 27.3 2.5E+02 0.0054 25.4 7.0 68 91-164 155-230 (437)
439 TIGR00703 conserved hypothetic 26.9 49 0.0011 26.4 2.0 23 112-139 163-186 (223)
440 PRK14983 aldehyde decarbonylas 26.8 37 0.0008 27.3 1.3 76 90-173 22-118 (231)
441 COG1168 MalY Bifunctional PLP- 26.1 4.8E+02 0.01 23.3 9.5 137 75-222 147-306 (388)
442 KOG3671|consensus 24.7 31 0.00066 31.7 0.6 53 162-216 89-142 (569)
443 PRK05093 argD bifunctional N-s 24.6 1.3E+02 0.0029 26.4 4.7 20 4-23 327-346 (403)
444 PF08543 Phos_pyr_kin: Phospho 24.5 1.4E+02 0.0031 24.4 4.5 27 94-120 88-115 (246)
445 PF06418 CTP_synth_N: CTP synt 24.4 1.3E+02 0.0027 25.6 4.1 45 73-120 116-160 (276)
446 PRK04205 hypothetical protein; 23.4 72 0.0016 25.6 2.4 23 112-139 169-192 (229)
447 COG1851 Uncharacterized conser 23.2 58 0.0013 25.9 1.8 23 112-139 169-192 (229)
448 PRK05953 precorrin-8X methylmu 23.1 1.4E+02 0.003 24.3 4.0 41 156-197 151-194 (208)
449 COG1932 SerC Phosphoserine ami 21.5 4.4E+02 0.0096 23.3 7.0 76 145-222 192-285 (365)
450 KOG1405|consensus 21.4 82 0.0018 28.0 2.5 21 3-23 410-431 (484)
451 KOG0634|consensus 21.1 2.7E+02 0.0059 25.4 5.7 65 147-213 291-355 (472)
452 PRK09265 aminotransferase AlaT 20.6 1.4E+02 0.0031 26.2 4.0 48 148-198 237-291 (404)
453 KOG3846|consensus 20.4 3.4E+02 0.0073 23.8 5.9 40 181-221 329-369 (465)
454 PF03685 UPF0147: Uncharacteri 20.2 1.9E+02 0.0042 19.9 3.7 36 187-222 47-83 (85)
455 COG1448 TyrB Aspartate/tyrosin 20.2 6.4E+02 0.014 22.6 8.4 76 148-223 243-332 (396)
456 PF12138 Spherulin4: Spherulat 20.1 2.1E+02 0.0047 23.8 4.7 34 87-120 27-62 (253)
No 1
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=4e-48 Score=340.29 Aligned_cols=177 Identities=34% Similarity=0.553 Sum_probs=160.9
Q ss_pred hhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHH
Q psy6205 38 VITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREV 117 (224)
Q Consensus 38 l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~ 117 (224)
..+.++...++++|+|++|||++.... +++...+++.+++.+......++++||||+|||||+||+++||++||+++
T Consensus 172 ~~~~~~~~~v~~~Pyp~~yr~p~~~~~---~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l 248 (447)
T COG0160 172 AGFGPLPPGVYHVPYPNPYRCPFGIGG---EECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKAL 248 (447)
T ss_pred cCCCCCCCCeEEecCCccccCcccCch---hhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHH
Confidence 334555566899999999999987654 67777888999997777777889999999999999999999999999999
Q ss_pred HHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCC
Q psy6205 118 YKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGG 185 (224)
Q Consensus 118 ~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~ 185 (224)
|++ |||||||||+ ||++||+| |+|||+||||+||||+|+|+|++++++++ +... .|.+||.|
T Consensus 249 ~~~~~~~gillI~DEVQtG~GRTG~-~fa~E~~g--v~PDivt~aK~ig~G~Pl~avv~r~ei~~-~~~g--~~~~Tf~G 322 (447)
T COG0160 249 RKLCREHGILLIADEVQTGFGRTGK-MFAFEHFG--VEPDIVTLAKSLGGGLPLSAVVGRAEIMD-WPPG--GHGGTFGG 322 (447)
T ss_pred HHHHHHcCCEEEEeccccCCCcccc-chhhhhcC--CCCCEEEecccccCCCceeEEeccHHhcc-cCCc--ccCCCCCc
Confidence 999 9999999996 99999998 99999999999999999999999999999 4333 68899999
Q ss_pred cHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 186 NPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 186 ~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
||++||||+|+||+|++++|++|++++|++|+++|++|
T Consensus 323 Npva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l 360 (447)
T COG0160 323 NPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEEL 360 (447)
T ss_pred CHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999875
No 2
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=3.4e-45 Score=320.28 Aligned_cols=177 Identities=32% Similarity=0.581 Sum_probs=157.8
Q ss_pred hhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCC-CCcccCCHHHHHH
Q psy6205 38 VITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSC-GGQIIPPANYLRE 116 (224)
Q Consensus 38 l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~-~G~~~~~~~~l~~ 116 (224)
..+.+++.+.+++++|+.|+......+ .++. .+++++||+++... ++++|||||+|||++. ||+++||++||++
T Consensus 166 ~~~~~ll~~~~~~~~P~~y~~~~~~~~--~~~~-~~~a~~le~~i~~~--g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~ 240 (449)
T COG0161 166 AFYDPLLPEVLHLPAPYAYRRGFFGEG--DEEF-AEAADELEALILEH--GPETIAAFIVEPVVGGAGGMLVPPPGYLKR 240 (449)
T ss_pred hhccccccCceecCCCcccccCCCCCC--hHHH-HHHHHHHHHHHHhc--CcccEEEEEecccccccCCcccCChHHHHH
Confidence 556667778889999999976654322 2444 68899999999853 6699999999998766 9999999999999
Q ss_pred HHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-cccccceecHHHHHhhhcC---Ccccc
Q psy6205 117 VYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQET---GVEYF 180 (224)
Q Consensus 117 ~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~---~~~~~ 180 (224)
+|++ |.|||||||+ +|++|++| |+|||+|+||+|+|| +||||++++++|++.+.+. ...|+
T Consensus 241 vr~iC~ky~ILlI~DEV~tGFGRTG~-~FA~e~~g--i~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG 317 (449)
T COG0161 241 VREICDKYGILLIADEVATGFGRTGK-MFACEHAG--IVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHG 317 (449)
T ss_pred HHHHHHHcCcEEEeecceeCCCcCch-hhhhhhcC--CCCCeeeecccccccchhhHhHhhhHHHHHHHhcccCCeeccC
Confidence 9999 9999999997 89999998 999999999999999 5999999999999999875 25678
Q ss_pred cCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh
Q psy6205 181 NTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 181 ~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~ 222 (224)
+||+|||++||||+++|++++++++++|+++++.+|.++|++
T Consensus 318 ~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~l~~~L~~ 359 (449)
T COG0161 318 HTYSGNPLACAAALANLDILEEEDLLERVAEIGAYLQAGLQA 359 (449)
T ss_pred CccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999986
No 3
>KOG1404|consensus
Probab=100.00 E-value=8.9e-45 Score=307.04 Aligned_cols=170 Identities=43% Similarity=0.751 Sum_probs=157.8
Q ss_pred ceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-----
Q psy6205 46 MSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH----- 120 (224)
Q Consensus 46 ~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----- 120 (224)
++++.++|+.||++++... .++..+++.+++++++.. ..++.|||+|+|||||.||++.+|++||+++++.
T Consensus 171 ~~~~~~~Pdp~r~~~~~~~--~~e~~d~~a~~l~d~i~~--~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~G 246 (442)
T KOG1404|consen 171 GVHHTMNPDPYRGIFGGSN--EEEASDRYAKELEDLILY--DGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRG 246 (442)
T ss_pred cccccCCCCcccccCCCCc--hhhhHHHHHHHHHHHHHh--cCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcC
Confidence 5778899999999998654 467788999999999975 3678899999999999999999999999999999
Q ss_pred -------HHhCCccccccchhhhhcCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHH
Q psy6205 121 -------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVA 193 (224)
Q Consensus 121 -------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa 193 (224)
|||||||||. ||+||+.| |.|||+||+|+||||+|||||++++||++.+.+.. .|++||+|||++||++
T Consensus 247 gl~IaDEVqtGfGRtG~-~wgfe~h~--v~PDIvTmAKgiGnG~Pl~AVvtt~EIa~v~~~~~-~~fnTyggnP~a~avg 322 (442)
T KOG1404|consen 247 GLFIADEVQTGFGRTGH-MWGFESHG--VVPDIVTMAKGIGNGFPLGAVVTTPEIADVLNQKS-SHFNTYGGNPVACAVG 322 (442)
T ss_pred CEEEehhhhhccccccc-cccccccC--CCccHHHHHhhccCCCcceeeecCHHHHHHHHhcc-ccccccCCCchhHHHH
Confidence 9999999995 99999998 99999999999999999999999999999998763 3889999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 194 NAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 194 ~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|+|++|++++|+|+++.+|.||+++|.++
T Consensus 323 ~aVL~Vikee~LqE~aa~vG~yl~~~l~~l 352 (442)
T KOG1404|consen 323 LAVLKVIKEENLQENAAEVGSYLLEKLAAL 352 (442)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999875
No 4
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.9e-44 Score=305.93 Aligned_cols=197 Identities=30% Similarity=0.479 Sum_probs=154.9
Q ss_pred EEEeecCCCCCCccccchhhhccCCC--cceeecCCCccccCCCCC----CC-------C-C-ChhHHHHHHHHHHHHHH
Q psy6205 19 VELVTCRKQKTPATSEAQHVITRPPV--RMSTEAPCPDVYRGKYPA----DK-------Y-P-DEDLGVKYAQDVQDLIE 83 (224)
Q Consensus 19 ielv~~~~t~~p~~~~a~~l~~~~~~--~~~~~vp~P~~yr~~~~~----~~-------~-~-~~~~~~~~~~~l~~~~~ 83 (224)
.|.|-+..+++++.+.+.+++.+-.. .+...+.+-+.||+..-. ++ + | .+.....-.+|++++.+
T Consensus 100 ~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ 179 (404)
T COG4992 100 ADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEA 179 (404)
T ss_pred ccEEEEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHH
Confidence 45566677777777665555444321 133445555666664320 00 0 0 01111122355555555
Q ss_pred HHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccc
Q psy6205 84 AMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGK 151 (224)
Q Consensus 84 ~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K 151 (224)
.+. +++||||+|||||+||+++|+++||+.+|++ ||||+||||+ ||++||+| |+|||+|++|
T Consensus 180 ai~---~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk-~fA~e~~g--V~PDI~tlaK 253 (404)
T COG4992 180 AID---EDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGK-LFAYEHYG--VEPDILTLAK 253 (404)
T ss_pred Hhc---cCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccch-HHHHHHhC--CCCCEEEeec
Confidence 442 3899999999999999999999999999999 9999999997 99999998 9999999999
Q ss_pred cccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 152 PMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 152 ~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+||||+|+||++.++++++.+... .|++||+|||++||++.++|+++.++++.++++++|++|+++|+++
T Consensus 254 ~LgGG~PigA~la~~~~~~~~~~G--~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l 323 (404)
T COG4992 254 ALGGGFPIGAMLATEEIASAFTPG--DHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLREL 323 (404)
T ss_pred cccCCccceeeEEchhhhhcCCCC--cccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998888887655 8999999999999999999999999999999999999999999985
No 5
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-41 Score=305.85 Aligned_cols=171 Identities=26% Similarity=0.466 Sum_probs=149.6
Q ss_pred cceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH----
Q psy6205 45 RMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH---- 120 (224)
Q Consensus 45 ~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~---- 120 (224)
.....+++|++|++++..+. +++...|+++++++++. .++++|||||+|||||++|+++||++|+++||++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~i~~--~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~ 248 (459)
T PRK05965 174 PWQHKIPSPYPYRNPVGDDP---QAIIAASVAALRAKVAE--LGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACREL 248 (459)
T ss_pred CCCEEcCCCcccccccCCCh---HHHHHHHHHHHHHHHHh--cCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHc
Confidence 34456777888887654332 45566788899888874 2457999999999999999999999999999999
Q ss_pred --------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc-ccccceecHHHHHhhhcC-----CcccccCCCCc
Q psy6205 121 --------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH-PVAAVITTKEIAKSFQET-----GVEYFNTYGGN 186 (224)
Q Consensus 121 --------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~-p~~av~~~~~i~~~~~~~-----~~~~~~T~~~~ 186 (224)
|||||||||+ ||+++++| |+|||+|+||+||||+ |+||+++++++++.+... ...|++||+||
T Consensus 249 gillI~DEV~tGfGRtG~-~~a~~~~g--v~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gn 325 (459)
T PRK05965 249 GILFVADEVITGFGRTGP-LFACEAEG--VVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAH 325 (459)
T ss_pred CCEEEEechhccCccCch-hhhHhhcC--CCCCeEEechhhccCCcceeEEEEcHHHHHHHhccccccccccccCCCCCC
Confidence 9999999997 89999998 9999999999999994 999999999999988642 12578999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 187 PVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 187 p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|++||+++++|++|+++++.++++++|++|+++|+++
T Consensus 326 pl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l 362 (459)
T PRK05965 326 PVSAAVGLEVLRLYHEGGLLANGQKAGPRFAAGLDAL 362 (459)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999875
No 6
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=7.4e-41 Score=300.50 Aligned_cols=169 Identities=28% Similarity=0.445 Sum_probs=145.2
Q ss_pred ceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-----
Q psy6205 46 MSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH----- 120 (224)
Q Consensus 46 ~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----- 120 (224)
++.++++|+.||+++.... +++...+++.++++++....++++|||||+|||||++|+++||++|++++|++
T Consensus 189 ~~~~~~~p~~~~~~~~~~~---~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~g 265 (464)
T PRK06938 189 GVQFLPYPYDYRCPFGLGG---EAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAG 265 (464)
T ss_pred CcEEeCCCccccccccCch---hhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 4456677777776664321 44555678888888864322346899999999999999999999999999999
Q ss_pred -------HHhCCccccccchhhhhcCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHH
Q psy6205 121 -------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVA 193 (224)
Q Consensus 121 -------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa 193 (224)
|||||||||+ ||+++++| |+|||+|+||+||||+|+||+++++++ +.+... .|++||+|||++||||
T Consensus 266 iLlI~DEV~tGfGRtG~-~~a~e~~g--v~PDiv~~gKglggG~PlsAv~~~~~~-~~~~~~--~~~~T~~gnpla~Aaa 339 (464)
T PRK06938 266 IPLIVDEIQSGFGRTGK-MFAFEHAG--IIPDVVVLSKAIGGSLPLAVVVYREWL-DTWQPG--AHAGTFRGNQMAMAAG 339 (464)
T ss_pred CEEEEeccccCCCcCcH-HHHHHhcC--CCCCEEEeeccccCCCceEEEeehhHh-hccCCC--CCCCCCCcCHHHHHHH
Confidence 9999999997 89999998 999999999999999999999999986 666432 5789999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 194 NAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 194 ~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++|++++++++.++++++|++|+++|+++
T Consensus 340 ~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l 369 (464)
T PRK06938 340 SATLRYIKEHRLAEHAAAMGERLREHLRQL 369 (464)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999875
No 7
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=298.62 Aligned_cols=177 Identities=28% Similarity=0.460 Sum_probs=150.3
Q ss_pred ccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHH
Q psy6205 40 TRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYK 119 (224)
Q Consensus 40 ~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~ 119 (224)
+.+...++.+++.|++|++++.... .+++...|+++++++++. .++++|||||+|||||++|+++||++|+++||+
T Consensus 173 ~~~~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~--~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~ 248 (461)
T PRK07482 173 FDLPIARVLHTEAPHYYRRADAGMS--EEQFSAYCADELEELILA--EGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQA 248 (461)
T ss_pred cCCCCCCCEEcCCCccccccccCCC--HHHHHHHHHHHHHHHHHh--cCCCcEEEEEECCccCCCCCcCCCHHHHHHHHH
Confidence 3444455667777877776542211 244556678888888753 256789999999999999999999999999999
Q ss_pred H------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc-ccccceecHHHHHhhhcC-----Cccccc
Q psy6205 120 H------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH-PVAAVITTKEIAKSFQET-----GVEYFN 181 (224)
Q Consensus 120 ~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~-p~~av~~~~~i~~~~~~~-----~~~~~~ 181 (224)
+ |||||||||+ +|+++++| |+|||+|+||+||||+ |+||+++++++++.+... ...|++
T Consensus 249 lc~~~giLlI~DEV~tGfGRtG~-~~a~~~~g--v~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~ 325 (461)
T PRK07482 249 VLKKYDILLIADEVVTGFGRLGS-MFGSDHYG--IEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGW 325 (461)
T ss_pred HHHHhCCEEEEeccccCCCcCcc-hhhHHhcC--CCCCEEEEccccccCccccceeeecHHHHHHHhcccccCCccccCC
Confidence 9 9999999997 89999998 9999999999999995 999999999999988632 224779
Q ss_pred CCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 182 TYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 182 T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
||+|||++||||+++|++++++++.++++++|++|+++|+++
T Consensus 326 T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l 367 (461)
T PRK07482 326 TYSGHPICAAAALANLDILERENLVGNAAEVGAYFRARLRAA 367 (461)
T ss_pred CCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999864
No 8
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.8e-40 Score=297.37 Aligned_cols=174 Identities=23% Similarity=0.446 Sum_probs=148.0
Q ss_pred cCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEcc-ccCCCCcccCCHHHHHHHHH
Q psy6205 41 RPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAES-LQSCGGQIIPPANYLREVYK 119 (224)
Q Consensus 41 ~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Ep-v~~~~G~~~~~~~~l~~~~~ 119 (224)
.+...+..++++|+.+++++.... +++...++++++++++ .++++|||||+|| +||++|+++||++||++||+
T Consensus 177 ~~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~~~l~~~l~---~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~ 250 (453)
T PRK06943 177 DPLIRHAHVVASPDARGARPGETA---ADVAARALADVRRLFA---ERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRA 250 (453)
T ss_pred ccCCCCCEEECCCCccccccCCCH---HHHHHHHHHHHHHHHH---hCCCceEEEEEeccccccCCcccCCHHHHHHHHH
Confidence 444445556777776665543221 3445567788887776 3678999999999 59999999999999999999
Q ss_pred H------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-cccccceecHHHHHhhhcC----CcccccC
Q psy6205 120 H------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQET----GVEYFNT 182 (224)
Q Consensus 120 ~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~----~~~~~~T 182 (224)
+ |||||||||+ ||+++++| |+|||+|+||+|||| +|+||+++++++++.+... ...|.+|
T Consensus 251 lc~~~gillI~DEV~TG~GRtG~-~fa~~~~g--v~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T 327 (453)
T PRK06943 251 LCDRYGVHLIADEIAVGCGRTGT-FFACEQAG--VWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHS 327 (453)
T ss_pred HHHHcCCEEEeechhhCCCCCcc-hhHHHhCC--CCCCeEeeehhhccCcccceEEEEcHHHHHhhcccCccCCccCCCC
Confidence 9 9999999997 89999998 999999999999999 5999999999999988632 1247799
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 183 YGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 183 ~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+|||++||+++++|++|++++++++++++|++|+++|+++
T Consensus 328 ~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l 368 (453)
T PRK06943 328 YTGNPLACRAALATLDLFAEDDVLARNARKSARLRAALAPL 368 (453)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999875
No 9
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.8e-40 Score=298.11 Aligned_cols=175 Identities=26% Similarity=0.463 Sum_probs=151.1
Q ss_pred ccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEcc-ccCCCCcccCCHHHHHHHH
Q psy6205 40 TRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAES-LQSCGGQIIPPANYLREVY 118 (224)
Q Consensus 40 ~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Ep-v~~~~G~~~~~~~~l~~~~ 118 (224)
+.+...+..++|+|++|+++++... +++...++++++++++ .++++|||||+|| |||++|+++||++|+++||
T Consensus 169 ~~p~~~~~~~~p~~~~~~~~~~~~~---~~~~~~~l~~le~~~~---~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr 242 (466)
T PRK07030 169 YKPLLLDTIKVPSPDCYLRPEGMSW---EEHSRRMFAHMEQTLA---EHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLR 242 (466)
T ss_pred CCccCCCCEEcCCCCccccccCCCH---HHHHHHHHHHHHHHHH---hCCCceEEEEEecccccCCCcccCCHHHHHHHH
Confidence 3344445667788888887654322 4555667788888776 3678999999999 7999999999999999999
Q ss_pred HH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-cccccceecHHHHHhhhcC-----Ccccc
Q psy6205 119 KH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQET-----GVEYF 180 (224)
Q Consensus 119 ~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~-----~~~~~ 180 (224)
++ |||||||||+ +|+++++| |+|||+|+||+|||| +|+||+++++++++.+... ...|+
T Consensus 243 ~lc~~~g~llI~DEV~TGfGRtG~-~~a~~~~g--v~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~ 319 (466)
T PRK07030 243 EACDRYGVHLIHDEIAVGFGRTGT-MFACEQAG--IRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHS 319 (466)
T ss_pred HHHHHcCCEEEEeehhhCcCcccc-chHHHhcC--CCCCEEeeehhccCCcccceEEEecHHHHHHHhcccccccccccC
Confidence 99 9999999997 89999998 999999999999999 5999999999999988532 23578
Q ss_pred cCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 181 NTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 181 ~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+||+|||++||+++++|++|++++++++++++|++|+++|+++
T Consensus 320 ~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l 362 (466)
T PRK07030 320 HSYTGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHL 362 (466)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999875
No 10
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=2.2e-40 Score=296.89 Aligned_cols=175 Identities=30% Similarity=0.534 Sum_probs=151.5
Q ss_pred cCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH
Q psy6205 41 RPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH 120 (224)
Q Consensus 41 ~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~ 120 (224)
.+...++.+++.|++|++++.... +.+...++++++++++. .++++|||||+|||||++|+++||++|++++|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~--~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~l 242 (451)
T PRK07678 168 EPLAPGFLHVPPPDCYRMPGIESE---DIYDLECVKEIDRVMTW--ELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEI 242 (451)
T ss_pred CCCCCCCEEeCCCccccccccCCh---HHHHHHHHHHHHHHHHh--cCCCceEEEEEccccCCCCcccCCHHHHHHHHHH
Confidence 344556677888888887664322 34556677888888863 3568999999999999999999999999999999
Q ss_pred ------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-cccccceecHHHHHhhhcCC----cccccCC
Q psy6205 121 ------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQETG----VEYFNTY 183 (224)
Q Consensus 121 ------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~~----~~~~~T~ 183 (224)
|||||||||+ +|++|++| |+|||+|+||+|||| +|+||+++++++++.+.... ..|++||
T Consensus 243 c~~~g~llI~DEV~tGfGRtG~-~~~~~~~g--v~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~ 319 (451)
T PRK07678 243 CQKHGALLISDEVICGFGRTGK-AFGFMNYG--VKPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTF 319 (451)
T ss_pred HHHcCCEEEEeehhhcCCcCch-hHHHHhcC--CCCCEEEeecccccCCcceeEEEEcHHHHHHHhccCcccccccCCCC
Confidence 9999999997 89999998 999999999999999 69999999999999886431 2478999
Q ss_pred CCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 184 GGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 184 ~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|||++||+++++|+++++++++++++++|++|+++|+++
T Consensus 320 ~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~~ 359 (451)
T PRK07678 320 GGNPAACALALKNLEIMENENLIERSAQLGELLLEQLKEE 359 (451)
T ss_pred CcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999753
No 11
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.9e-40 Score=297.66 Aligned_cols=173 Identities=28% Similarity=0.426 Sum_probs=147.6
Q ss_pred CCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-
Q psy6205 42 PPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH- 120 (224)
Q Consensus 42 ~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~- 120 (224)
+...++.++|+|++|+++++... +++.+.+.+.+++.++.+...+++|||||+|||||++|+++||++||+.+|++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc 255 (459)
T PRK06931 179 GLMPGVQFMPYPHEYRCPLGIGG---EAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVT 255 (459)
T ss_pred CCCCCcEEeCCCccccccccCCc---hhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHH
Confidence 33455677888888888875322 34445555566666654333567899999999999999999999999999999
Q ss_pred -----------HHhCCccccccchhhhhcCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHH
Q psy6205 121 -----------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVS 189 (224)
Q Consensus 121 -----------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~ 189 (224)
|||||||||+ ||+++++| |+|||+|+||+||||+|+|++++++++ +.+... .|++||+|||++
T Consensus 256 ~~~g~LlI~DEV~tGfGRtG~-~~a~~~~g--v~PDivt~gK~l~gG~Pi~av~~~~~~-~~~~~~--~~~~T~~gnpla 329 (459)
T PRK06931 256 QKHGILLIVDEVQAGFARTGK-MFAFEHAG--IEPDIIVMSKAVGGGLPLAVLGIKKEF-DAWQPG--GHTGTFRGNQLA 329 (459)
T ss_pred HHcCCEEEEecchhcCCcCch-HHHhhhcC--CCCCEEEecccccCCcceeeeeeHHHH-hhccCC--CCCCCCCCCHHH
Confidence 9999999997 89999998 999999999999999999999998875 766432 578999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 190 CAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 190 ~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
||+|+++|++|++++++++++++|++|+++|+++
T Consensus 330 ~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l 363 (459)
T PRK06931 330 MATGLTTLKILKEENLAQNAAERGEWLKAQLAEL 363 (459)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999875
No 12
>KOG1403|consensus
Probab=100.00 E-value=3.1e-41 Score=277.51 Aligned_cols=175 Identities=63% Similarity=1.046 Sum_probs=163.1
Q ss_pred eeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------
Q psy6205 47 STEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------ 120 (224)
Q Consensus 47 ~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------ 120 (224)
+|..|+|+.||+.+....++..+....|.++++++++.....+..|||+|.|..|+-||.+.||.+|++.+.+.
T Consensus 165 VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGG 244 (452)
T KOG1403|consen 165 VHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGG 244 (452)
T ss_pred eEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCC
Confidence 67789999999999877665556667889999999987766788999999999999999999999999999998
Q ss_pred ------HHhCCccccccchhhhhcCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHH
Q psy6205 121 ------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVAN 194 (224)
Q Consensus 121 ------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~ 194 (224)
||+||||.|+++|++|.++ +.|||+||||.+|||+|+++|+++++|+++|...+..+++||+|||++||+++
T Consensus 245 v~IaDEVQvGFGRvG~hyWafq~y~--fiPDIVtmgKpmGNGhPVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~l 322 (452)
T KOG1403|consen 245 VCIADEVQVGFGRVGSHYWAFQTYN--FIPDIVTMGKPMGNGHPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGL 322 (452)
T ss_pred eEEeehhhhcccccchhhhhhhhhc--cccchheecccCCCCCeeeEEeccHHHHHHhccccceehhccCCCchhHHHHH
Confidence 9999999999999999998 99999999999999999999999999999998877889999999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 195 AVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 195 a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
++|+++++++|+++++++|++|...|+++
T Consensus 323 aVm~v~e~E~Lq~ha~~vG~~L~~lL~~~ 351 (452)
T KOG1403|consen 323 AVMRVCEDENLQEHAQQVGEKLEVLLRRL 351 (452)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988764
No 13
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=7.8e-40 Score=293.12 Aligned_cols=176 Identities=30% Similarity=0.502 Sum_probs=151.9
Q ss_pred cCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH
Q psy6205 41 RPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH 120 (224)
Q Consensus 41 ~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~ 120 (224)
.+...++.+++.|++|+++|+..+ .+.+...+++++|+++.. .++++|||||+|||||++|+++||++|++.+|++
T Consensus 167 ~~~~~g~~~~~~~~~~~~~~~~~d--~~~~~~~~~~~le~~i~~--~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~l 242 (449)
T PRK07481 167 EPLLPGCFHVETPWLYRNPFTEQD--PEELARICARLLEREIAF--QGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREV 242 (449)
T ss_pred CCCCCCCEEeCCCcccccccCCCC--HHHHHHHHHHHHHHHHHh--cCCCcEEEEEEecccCCcCCccCCHHHHHHHHHH
Confidence 444556777888888888776321 134445667888888763 3568999999999999999999999999999999
Q ss_pred ------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-cccccceecHHHHHhhhcC-----CcccccC
Q psy6205 121 ------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQET-----GVEYFNT 182 (224)
Q Consensus 121 ------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~-----~~~~~~T 182 (224)
|||||||||+ +|+++++| |+|||+|+||+|||| +|+||+++++++++.+... ...|++|
T Consensus 243 c~~~g~llI~DEV~tGfGRtG~-~~a~~~~g--v~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T 319 (449)
T PRK07481 243 CDRHGILLIADEVVTGFGRTGS-WFGSRGWG--VKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYT 319 (449)
T ss_pred HHHcCCEEEEeehhhCcCcCch-hhHhhhcC--CCCCEEEEeecccCCCcCceEEEEcHHHHHHHhccCccccccccCCC
Confidence 9999999997 89999998 999999999999999 5999999999999988642 1257799
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 183 YGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 183 ~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+|||++||+++++|++|++++++++++++|++|+++|+++
T Consensus 320 ~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l 360 (449)
T PRK07481 320 YSGHPVACAAALATLDIVVREDLPANAAKRGAYLLEGLQPL 360 (449)
T ss_pred CCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999864
No 14
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=8.5e-40 Score=293.93 Aligned_cols=174 Identities=28% Similarity=0.514 Sum_probs=148.8
Q ss_pred ccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEcc-ccCCCCcccCCHHHHHHHH
Q psy6205 40 TRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAES-LQSCGGQIIPPANYLREVY 118 (224)
Q Consensus 40 ~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Ep-v~~~~G~~~~~~~~l~~~~ 118 (224)
+.+...++.++|.|+.||+++.... +++...+++.++++++. ++++|||||+|| +||++|+++||++|+++||
T Consensus 191 ~~p~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~~~l~~~~~~---~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr 264 (472)
T PRK08742 191 YAPLLLESLFAPSPDAYLAEPGQSA---EDYALQAADALQALFEQ---SPGEICALILEPRLQCAGGMRMHHPAYLRRAR 264 (472)
T ss_pred cCCCCCCCEEeCCCCccccccCCCH---HHHHHHHHHHHHHHHHh---CCCceEEEEEccccccCCCcccCCHHHHHHHH
Confidence 3444445667788888887654322 45556678888887762 568999999999 6999999999999999999
Q ss_pred HH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc-ccccceecHHHHHhhhcC----Cccccc
Q psy6205 119 KH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH-PVAAVITTKEIAKSFQET----GVEYFN 181 (224)
Q Consensus 119 ~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~-p~~av~~~~~i~~~~~~~----~~~~~~ 181 (224)
++ |||||||||+ ||+++++| |+|||+|+||+||||+ |+||+++++++++.+... ...|++
T Consensus 265 ~lc~~~gillI~DEV~TGfGRtG~-~~a~e~~g--v~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~ 341 (472)
T PRK08742 265 ELCDAHGAFLIADEIATGFGRTGT-LFACEQAG--VMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLHSH 341 (472)
T ss_pred HHHHHcCCEEEEechhhCCCCCcc-chHHHhcC--CCCCEEEEcccccCCCCCcceeeccHHHHHHhhccCccCccCcCC
Confidence 99 9999999997 89999998 9999999999999995 999999999999987532 234779
Q ss_pred CCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh
Q psy6205 182 TYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 182 T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~ 222 (224)
||+|||++|||++++|++++++++.++++++|++|++.++.
T Consensus 342 T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~~~~~~ 382 (472)
T PRK08742 342 SYTGNPLACAAALATLDIFADDDVIARNQPTAARMTQLAAQ 382 (472)
T ss_pred CCCccHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999977764
No 15
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=1.8e-39 Score=291.10 Aligned_cols=172 Identities=31% Similarity=0.474 Sum_probs=147.2
Q ss_pred CcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH---
Q psy6205 44 VRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--- 120 (224)
Q Consensus 44 ~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--- 120 (224)
.....++++|++||+++..+. +++.+.|++++++.+.. .++++|||||+|||||++|+++||++|+++||++
T Consensus 177 ~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~~~l~~~~~~--~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~ 251 (456)
T PRK07480 177 IPGIVHIDQPYWFGEGGDMTP---EEFGLAAARQLEAKILE--LGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRK 251 (456)
T ss_pred CCCCeecCCCcccccccCCCh---HHHHHHHHHHHHHHHHh--cCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 345566788888887654322 44556667888765542 3568999999999999999999999999999999
Q ss_pred ---------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc-ccccceecHHHHHhhhc--CCcccccCCCCcHH
Q psy6205 121 ---------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH-PVAAVITTKEIAKSFQE--TGVEYFNTYGGNPV 188 (224)
Q Consensus 121 ---------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~-p~~av~~~~~i~~~~~~--~~~~~~~T~~~~p~ 188 (224)
|||||||||+ +|+++++| ++|||+|+||+||||+ |+||+++++++++.+.. ....|++||+|||+
T Consensus 252 ~g~llI~DEV~tGfGRtG~-~~a~~~~g--v~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl 328 (456)
T PRK07480 252 YDILLVADEVICGFGRTGE-WFGSQHFG--IKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPV 328 (456)
T ss_pred cCCEEEEechhhCCCcCcc-hhhhhhcC--CCCCeeeeehhhccCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHH
Confidence 9999999997 89999998 9999999999999995 99999999999998842 22357799999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHH-HHHHHHHHHhhhhc
Q psy6205 189 SCAVANAVMEVLETENLREHA-LDVGNQLHTPKKEN 223 (224)
Q Consensus 189 ~~aaa~a~l~~~~~~~l~~~~-~~~g~~l~~~l~~l 223 (224)
+||+++++|++|+++++++++ +++|++|+++|+++
T Consensus 329 ~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~~l~~l 364 (456)
T PRK07480 329 AAAVALANLRILRDEGIVERVRDDTGPYLQKRLREL 364 (456)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999 69999999999864
No 16
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=290.89 Aligned_cols=175 Identities=27% Similarity=0.466 Sum_probs=147.7
Q ss_pred CCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccC-CCCcccCCHHHHHHHHHH
Q psy6205 42 PPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQS-CGGQIIPPANYLREVYKH 120 (224)
Q Consensus 42 ~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~-~~G~~~~~~~~l~~~~~~ 120 (224)
+...+..+++.|++|+++.... ..+++...|++++++++.. .++++|||||+||||| ++|+++|+++||+.+|++
T Consensus 154 p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~--~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~l 229 (443)
T PRK07483 154 PLLIEAHHVSPCYAYREQRAGE--SDEAYGQRLADELEAKILE--LGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREV 229 (443)
T ss_pred CCCCCCEEeCCCccccccccCC--CHHHHHHHHHHHHHHHHHh--cCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHH
Confidence 3344455666776677653221 1245566778888887753 3568999999999999 589999999999999999
Q ss_pred ------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc-ccccceecHHHHHhhhcCC--cccccCCCC
Q psy6205 121 ------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH-PVAAVITTKEIAKSFQETG--VEYFNTYGG 185 (224)
Q Consensus 121 ------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~-p~~av~~~~~i~~~~~~~~--~~~~~T~~~ 185 (224)
|||||||||+ ||+++++| |+|||+|+||+||||+ |+|++++++++++.+.... ..|++||+|
T Consensus 230 c~~~gillI~DEV~tGfGRtG~-~~a~~~~g--v~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~g 306 (443)
T PRK07483 230 CDRYGVLLILDEVMCGMGRTGT-LFACEEDG--VAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLG 306 (443)
T ss_pred HHHhCCEEEEecceeCcccCcH-HHHHhhcC--CCCCeeeehhhhccCccccEEEEEcHHHHHHHhcCCCccccCCCCCC
Confidence 9999999997 89999998 9999999999999995 9999999999999886432 247799999
Q ss_pred cHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 186 NPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 186 ~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
||++||+++++|++|+++++.++++++|++|+++|+++
T Consensus 307 npl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~~~L~~l 344 (443)
T PRK07483 307 HATACAAALAVQRVIAEDGLLANVRARGEQLRARLRER 344 (443)
T ss_pred CHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999863
No 17
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=2.7e-39 Score=292.55 Aligned_cols=172 Identities=28% Similarity=0.539 Sum_probs=147.4
Q ss_pred cceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH----
Q psy6205 45 RMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH---- 120 (224)
Q Consensus 45 ~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~---- 120 (224)
..+.++++|++|+++.+... .+++...++++|++++.. .+++++||||+|||||++|+++||++|+++||++
T Consensus 218 ~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~le~~l~~--~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~ 293 (504)
T PLN02760 218 PFVLHTDCPHYWRFHLPGET--EEEFSTRLADNLENLILK--EGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKY 293 (504)
T ss_pred CCcEEeCCCcccccCCCCCc--HHHHHHHHHHHHHHHHHh--cCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 34556777777776433211 234455677889888753 3567899999999999999999999999999999
Q ss_pred --------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-cccccceecHHHHHhhhcC-----CcccccCCCCc
Q psy6205 121 --------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQET-----GVEYFNTYGGN 186 (224)
Q Consensus 121 --------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~-----~~~~~~T~~~~ 186 (224)
|+|||||||+ +|+++++| |+|||+||||+|||| +|+||+++++++++.+... ...|++||+||
T Consensus 294 g~lLI~DEV~TGfGRtG~-~~a~e~~g--v~PDivtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gn 370 (504)
T PLN02760 294 DILFIADEVICAFGRLGT-MFGCDKYN--IKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGH 370 (504)
T ss_pred CCEEEecchhhCCcccch-hhHHHhcC--CCCcEEEecccccCCccccceEeecHHHHhhhhcccccccCcccCCCCCCC
Confidence 9999999997 89999998 999999999999999 5999999999999998642 13578999999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 187 PVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 187 p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|++||+++++|++|++++++++++++|++|+++|+++
T Consensus 371 Pl~~Aaala~Le~i~~~~l~~~~~~~g~~l~~~L~~l 407 (504)
T PLN02760 371 PVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAF 407 (504)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999864
No 18
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=2.8e-39 Score=290.54 Aligned_cols=172 Identities=30% Similarity=0.499 Sum_probs=148.1
Q ss_pred CcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH---
Q psy6205 44 VRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--- 120 (224)
Q Consensus 44 ~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--- 120 (224)
...+.+++.|++|+++.+.+. +++.+.+++++++.+.. .++++|||||+|||||++|+++||++|++++|++
T Consensus 178 ~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~~~~~~~i~~--~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~ 252 (466)
T PRK07036 178 SDLVHHLSSPNPYRRPAGMSE---AAFCDFLVDEFEDKILS--LGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRR 252 (466)
T ss_pred CCCcEEecCCcccccccCCCh---HHHHHHHHHHHHHHHHH--cCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHH
Confidence 344566778888877654322 45556677888887763 3678999999999999999999999999999999
Q ss_pred ---------HHhCCccccccchhhh-hcCCCCCCchhcccccccCC-cccccceecHHHHHhhhcC---C--cccccCCC
Q psy6205 121 ---------VQVGFGRVGTHWWAFQ-LQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQET---G--VEYFNTYG 184 (224)
Q Consensus 121 ---------v~tG~GrtG~~~~~~~-~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~---~--~~~~~T~~ 184 (224)
|||||||||+ +|+++ ++| ++|||+|+||+|||| +|+||+++++++++.+... . ..|++||+
T Consensus 253 ~g~llI~DEV~tGfGRtG~-~~~~~~~~g--v~PDivt~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~ 329 (466)
T PRK07036 253 YDILYISDEVVTGFGRLGH-FFASEAVFG--IQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYS 329 (466)
T ss_pred cCCEEEEeechhCCCcCch-hhhhhhhcC--CCCCEEEEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCCC
Confidence 9999999997 89998 788 999999999999999 5999999999999988632 1 24678999
Q ss_pred CcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 185 GNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 185 ~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|||++||+++++|++|++++++++++++|++|+++|+++
T Consensus 330 gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~l~~~L~~l 368 (466)
T PRK07036 330 GHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASL 368 (466)
T ss_pred CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999764
No 19
>KOG1402|consensus
Probab=100.00 E-value=2.1e-39 Score=269.26 Aligned_cols=139 Identities=35% Similarity=0.600 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
+++|+..++ ...+||||+|||||++|++.||++||+++|++ ||||+||||+ ||+++|.. +
T Consensus 196 ~eale~~l~-----~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk-~la~d~en--v 267 (427)
T KOG1402|consen 196 AEALEVALK-----SPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGK-LLACDYEN--V 267 (427)
T ss_pred HHHHHHHhc-----CCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCc-EEEeehhh--c
Confidence 455555554 26999999999999999999999999999999 9999999997 89999997 9
Q ss_pred CCchhcccccccCC-cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 143 IPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 143 ~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
+|||+.+||+|+|| +|+||+++++++|..+.+. .|++||+|||++|++|.|+||+|.+++|.+|++.+|..|+.+|+
T Consensus 268 ~PDivilgKalSGG~~Pvsavl~~~~im~~~~pg--eHgsTyggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~ 345 (427)
T KOG1402|consen 268 RPDIVILGKALSGGVYPVSAVLADDDIMLNIKPG--EHGSTYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLN 345 (427)
T ss_pred CCCeEEEeccccCCeeeeEEEEecHHHHhccCCC--ccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 7999999999999997665 79999999999999999999999999999999999999999998
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 346 ~l 347 (427)
T KOG1402|consen 346 KL 347 (427)
T ss_pred hc
Confidence 75
No 20
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=4.3e-39 Score=288.39 Aligned_cols=171 Identities=29% Similarity=0.513 Sum_probs=145.6
Q ss_pred ceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-----
Q psy6205 46 MSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH----- 120 (224)
Q Consensus 46 ~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----- 120 (224)
++..++.|++|++++.... .+++..+++++++++++. .++++|||||+|||||++|+++||++||+++|++
T Consensus 173 ~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~le~~l~~--~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g 248 (451)
T PRK06062 173 GVVHFFGPFLYRSEFHATT--EEEECERALAHLERVIEL--EGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHG 248 (451)
T ss_pred CCEEeCCCCccccccCCCC--hHHHHHHHHHHHHHHHHh--cCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcC
Confidence 3445566666766653211 134556678888888863 2457899999999999999999999999999999
Q ss_pred -------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc-ccccceecHHHHHhhhcCCcccccCCCCcHHHHHH
Q psy6205 121 -------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH-PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAV 192 (224)
Q Consensus 121 -------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~-p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aa 192 (224)
|+|||||||+ +|+++++| |+|||+||||+||||+ |+||+++++++++.+.+....+++||+|||++||+
T Consensus 249 ~lLI~DEV~tGfGRtG~-~~a~~~~g--v~PDi~t~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aa 325 (451)
T PRK06062 249 IVLIADEVMAGFGRTGK-WFAIEHFG--VVPDLITFAKGVNSGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAA 325 (451)
T ss_pred CEEEeeccccCCCcCcH-HHHHHhcC--CCCCeeeechhhhcCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHH
Confidence 9999999997 89999998 9999999999999995 99999999999999864433577899999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHH-HHHHHhhhhc
Q psy6205 193 ANAVMEVLETENLREHALDVG-NQLHTPKKEN 223 (224)
Q Consensus 193 a~a~l~~~~~~~l~~~~~~~g-~~l~~~l~~l 223 (224)
++++|++|+++++.++++++| ++|+++|+++
T Consensus 326 a~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l 357 (451)
T PRK06062 326 AVATINAMEEEGIVENAARIGAEVLGPGLREL 357 (451)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999 6999998864
No 21
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=6.2e-39 Score=288.00 Aligned_cols=175 Identities=31% Similarity=0.499 Sum_probs=150.4
Q ss_pred ccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEcc-ccCCCCcccCCHHHHHHHH
Q psy6205 40 TRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAES-LQSCGGQIIPPANYLREVY 118 (224)
Q Consensus 40 ~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Ep-v~~~~G~~~~~~~~l~~~~ 118 (224)
+.+...+..++|+|+.|++++..+. +++.+.++++++++++. ++++|||||+|| |||++|+++||++|++.+|
T Consensus 178 ~~~~~~~~~~~p~p~~~~~~~~~~~---~~~~~~~~~~l~~~l~~---~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr 251 (460)
T PRK06916 178 YSSLLFEAIKMPYPYTYRSPYGNDK---AEIVKKHLEELEELLKE---KHEEIAAIIVEPLVQGAGGMITMPKGYLKGLR 251 (460)
T ss_pred cCCCCCCCEEeCCCcccccccCCCh---HHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcccCCHHHHHHHH
Confidence 3444445667788888887654332 45556678888887763 678999999999 7999999999999999999
Q ss_pred HH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-cccccceecHHHHHhhhcC-----Ccccc
Q psy6205 119 KH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQET-----GVEYF 180 (224)
Q Consensus 119 ~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~-----~~~~~ 180 (224)
++ |||||||||+ +|+++++| |+|||+|+||+|||| +|+||+++++++++.+... ...|.
T Consensus 252 ~lc~~~g~llI~DEV~TG~GRtG~-~~a~~~~g--v~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~ 328 (460)
T PRK06916 252 NLCTKYNVLFITDEVATGFGRTGK-MFACEHEN--VTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHG 328 (460)
T ss_pred HHHHHcCCEEEeechhhCCCcCch-hhHHHhcC--CCCCeeeeehhhhcCccccceeeecHHHHHHhhccccccCccccC
Confidence 99 9999999997 89999998 999999999999999 5999999999999987531 12467
Q ss_pred cCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 181 NTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 181 ~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+||+|||++||+++++|+++++++++++++++|++|++.|+++
T Consensus 329 ~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~l~~l 371 (460)
T PRK06916 329 HSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDL 371 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999875
No 22
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=6.2e-39 Score=288.00 Aligned_cols=177 Identities=27% Similarity=0.487 Sum_probs=151.0
Q ss_pred ccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHH
Q psy6205 40 TRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYK 119 (224)
Q Consensus 40 ~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~ 119 (224)
+.+...+..++++|++|++...... .+.+.+.|++++|+++.. .++++|||||+|||||++|+++||++|++.+|+
T Consensus 171 ~~~~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~le~~~~~--~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~ 246 (460)
T PRK06105 171 FDLPLDRILHTGCPHYYRFGLPGES--EEAFATRLANELEALILA--EGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQA 246 (460)
T ss_pred cCCCCCCCEEcCCCcccccccCCCC--hHHHHHHHHHHHHHHHHH--cCCCceEEEEEccccCCCCCccCCHHHHHHHHH
Confidence 3344455667788887775432211 245566788999988863 356799999999999999999999999999999
Q ss_pred H------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-cccccceecHHHHHhhhcCC-----ccccc
Q psy6205 120 H------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQETG-----VEYFN 181 (224)
Q Consensus 120 ~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~~-----~~~~~ 181 (224)
+ |||||||||+ +|+++++| ++|||+|+||+|||| +|+|++++++++++.+.... ..|.+
T Consensus 247 lc~~~~~llI~DEv~tG~GRtG~-~f~~~~~~--v~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~ 323 (460)
T PRK06105 247 VLRKYDILLVADEVICGFGRTGN-MFGCETFG--IKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGF 323 (460)
T ss_pred HHHHcCCeEEEeccccCCCcCch-hhhHHhcC--CCCCeeeeecccccCcccceEEEEcHHHHHHHhcccccCcccccCC
Confidence 9 9999999997 89999998 999999999999999 69999999999999886431 23679
Q ss_pred CCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 182 TYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 182 T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
||+|||++||+++++|++|++++++++++++|++|+++|+++
T Consensus 324 T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~l~~~L~~l 365 (460)
T PRK06105 324 TASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRAL 365 (460)
T ss_pred CCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999875
No 23
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=6.2e-39 Score=309.98 Aligned_cols=171 Identities=53% Similarity=0.958 Sum_probs=150.8
Q ss_pred eeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------
Q psy6205 47 STEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------ 120 (224)
Q Consensus 47 ~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------ 120 (224)
+..++.|++||++|+... .++...+++++++.++.+..+++++||||+|||||++|+++||++|++.+|++
T Consensus 743 ~~~~~~p~~~~~~~~~~~---~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~ 819 (1013)
T PRK06148 743 VEVAEVPDSYRGPERWPD---AEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGG 819 (1013)
T ss_pred ceEcCCCCccccCCCCCh---hhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCC
Confidence 445667777888776432 44566778888888876555668899999999999999999999999999999
Q ss_pred ------HHhCCccccccchhhhhcCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHH
Q psy6205 121 ------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVAN 194 (224)
Q Consensus 121 ------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~ 194 (224)
|||||||||++||+++++| |+|||+||||+||||+|+||+++++++++.+... ..|++||+|||++|||++
T Consensus 820 llI~DEVqtGfGRtG~~~~a~e~~g--v~PDivt~gK~lggG~Plgav~~~~ei~~~~~~g-~~~~~Tf~gnpla~aaa~ 896 (1013)
T PRK06148 820 VCIADEVQVGFGRVGSHWWAFETQG--VVPDIVTMGKPIGNGHPMGAVVTTREIADSFDNG-MEYFNTFGGNPVSCAIGL 896 (1013)
T ss_pred EEEEEecccCCCCCCCcchhhhhcC--CCcceeeecccccCCcceEEEEEcHHHHhhccCC-CccccCCCCCHHHHHHHH
Confidence 9999999995479999998 9999999999999999999999999999998643 247799999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 195 AVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 195 a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
++|++|++++++++++++|++|+++|+++
T Consensus 897 a~L~~i~~e~l~~~~~~~G~~l~~~L~~l 925 (1013)
T PRK06148 897 AVLDIIEDEDLQRNALEIGNYLLAGLREL 925 (1013)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999875
No 24
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=1.1e-38 Score=286.45 Aligned_cols=172 Identities=29% Similarity=0.475 Sum_probs=146.8
Q ss_pred CcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH---
Q psy6205 44 VRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--- 120 (224)
Q Consensus 44 ~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--- 120 (224)
..+..++|.|++|++++.... .++.+.+++++++.+.. .+++++||||+|||||++|+++||++|+++||++
T Consensus 180 ~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~~~le~~~~~--~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~ 254 (460)
T PRK12403 180 IPDVAHIDEPYWYANGGELTP---AEFGRRAALQLEEKILE--LGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQ 254 (460)
T ss_pred CCCCEEeCCCcccccccCCCh---HHHHHHHHHHHHHHHHH--hCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 344667778888876543322 44556677888766643 2567999999999999999999999999999999
Q ss_pred ---------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc-ccccceecHHHHHhhhcCC--cccccCCCCcHH
Q psy6205 121 ---------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH-PVAAVITTKEIAKSFQETG--VEYFNTYGGNPV 188 (224)
Q Consensus 121 ---------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~-p~~av~~~~~i~~~~~~~~--~~~~~T~~~~p~ 188 (224)
|+|||||||+ +|+++++| ++|||+|+||+||||+ |+||+++++++++.+.... ..|++||+|||+
T Consensus 255 ~g~lLI~DEV~tGfGRtG~-~~a~e~~g--v~PDiv~~gK~lggG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl 331 (460)
T PRK12403 255 YDVLLCADEVIGGFGRTGE-WFAHEHFG--FEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPV 331 (460)
T ss_pred cCCEEEEeccccCCCcCch-hhhhhhcC--CCCCeEEEcccccccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHH
Confidence 9999999997 89999998 9999999999999995 9999999999999986432 236789999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHH-HHHHHHHHhhhhc
Q psy6205 189 SCAVANAVMEVLETENLREHAL-DVGNQLHTPKKEN 223 (224)
Q Consensus 189 ~~aaa~a~l~~~~~~~l~~~~~-~~g~~l~~~l~~l 223 (224)
+||+++++|++|++++++++++ ++|++|+++|+++
T Consensus 332 ~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l 367 (460)
T PRK12403 332 AAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREV 367 (460)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999996 9999999999764
No 25
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=3.1e-38 Score=281.63 Aligned_cols=144 Identities=31% Similarity=0.525 Sum_probs=129.4
Q ss_pred HHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCC
Q psy6205 77 DVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIP 144 (224)
Q Consensus 77 ~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~p 144 (224)
++++.++.+..+++++||||+|||||++|+++||++||++++++ |||||||||+ ||+++++| |+|
T Consensus 210 ~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~-~~a~e~~g--v~P 286 (442)
T TIGR03372 210 AMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGK-MFACEHEG--VQP 286 (442)
T ss_pred HHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCcccc-chhhhhcC--CCC
Confidence 34444443333568899999999999999999999999999999 9999999997 89999998 999
Q ss_pred chhcccccccCC-cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 145 DIVTVGKPMGNG-HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 145 Di~~~~K~l~~G-~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
||+||||+|||| +|+||+++++++++.+......|++||+|||++|||++++|++|+++++.++++++|++|+++|+++
T Consensus 287 Divt~gK~lg~G~~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l 366 (442)
T TIGR03372 287 DILCLAKALGGGVMPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQL 366 (442)
T ss_pred CeeeehhhhcCCcccceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 6999999999999988543346789999999999999999999999999999999999999999875
No 26
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6.9e-38 Score=280.83 Aligned_cols=176 Identities=30% Similarity=0.491 Sum_probs=147.3
Q ss_pred CCCcceeecCCCccccCCCCCCCC-CChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH
Q psy6205 42 PPVRMSTEAPCPDVYRGKYPADKY-PDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH 120 (224)
Q Consensus 42 ~~~~~~~~vp~P~~yr~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~ 120 (224)
+..+++.++|+|+.|++++..+.+ +.++..+.+++.+++.+.....++++|||||+|||||++|+++||++|+++++++
T Consensus 172 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~l 251 (457)
T PRK05639 172 PLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKL 251 (457)
T ss_pred CCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHH
Confidence 334456667778777766542211 1234455677888877643212468999999999999999999999999999999
Q ss_pred ------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHH
Q psy6205 121 ------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPV 188 (224)
Q Consensus 121 ------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~ 188 (224)
|+|||||||+ +|+++++| ++|||+||||+||||+|+|++++++++++.. .. .+++||++||+
T Consensus 252 c~~~g~llI~DEv~tG~GrtG~-~~a~~~~g--v~PDiv~~gK~l~gG~pi~av~~~~~i~~~~-~~--~~~~T~~g~p~ 325 (457)
T PRK05639 252 LDEHGILLVMDEVQTGIGRTGK-WFASEWFE--VKPDLIIFGKGVASGMGLSGVIGRKELMDLT-SG--SALLTPAANPV 325 (457)
T ss_pred HHHcCCEEEEechhhccCcCch-HHHHHhcC--CCCCEEEechhhcCCCcceeEEehHHHHhhc-CC--CcccCCCcCHH
Confidence 9999999997 89999998 9999999999999999999999999999932 22 46789999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 189 SCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 189 ~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|||++++|+++++++++++++++|++|+++|+++
T Consensus 326 ~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l 360 (457)
T PRK05639 326 ISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEM 360 (457)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999874
No 27
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=3.6e-38 Score=273.28 Aligned_cols=147 Identities=41% Similarity=0.677 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhh
Q psy6205 70 LGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQL 137 (224)
Q Consensus 70 ~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~ 137 (224)
+...+++++++++... +.++|||||+|||||++|+++++++|++.|+++ |||||||||+ +|++++
T Consensus 158 ~~~~~~~~~~~~~~~~--~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~-~~a~~~ 234 (339)
T PF00202_consen 158 EEQACLNALEELIAAL--NADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGK-FFASEH 234 (339)
T ss_dssp HHHHHHHHHHHHHHHH--HGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSS-SSGHHH
T ss_pred hHHHHHHHHHHHHHhh--cCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCC-ccceec
Confidence 3445566676666543 467999999999999999999999999999999 9999999997 899999
Q ss_pred cCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q psy6205 138 QGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLH 217 (224)
Q Consensus 138 ~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~ 217 (224)
+| ++|||+|+||+|+||+|+|++++++++++.+... .+.+||++||++|++++++|++++++++.++++++|++|+
T Consensus 235 ~g--v~PDiv~~gK~l~gG~p~sav~~~~~i~~~~~~~--~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~ 310 (339)
T PF00202_consen 235 YG--VDPDIVTFGKGLGGGLPISAVLGSEEIMEAFQPG--SHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLR 310 (339)
T ss_dssp HT--SSSSEEEEEGGGGTTSSEEEEEEEHHHHTTSCTT--SSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred cc--ccCcccccccchhhhhhcccccccchhhcccccc--ccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHH
Confidence 98 9999999999999999999999999999988654 5889999999999999999999999999999999999999
Q ss_pred Hhhhhc
Q psy6205 218 TPKKEN 223 (224)
Q Consensus 218 ~~l~~l 223 (224)
++|+++
T Consensus 311 ~~L~~l 316 (339)
T PF00202_consen 311 EGLREL 316 (339)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999865
No 28
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=1e-37 Score=279.22 Aligned_cols=169 Identities=28% Similarity=0.460 Sum_probs=142.9
Q ss_pred eeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCC-CCcccCCHHHHHHHHHH-----
Q psy6205 47 STEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSC-GGQIIPPANYLREVYKH----- 120 (224)
Q Consensus 47 ~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~-~G~~~~~~~~l~~~~~~----- 120 (224)
...++.|++++++++.+. +.+...+++.++++++. ..+++|||||+||+||+ ||+++||++|++.||++
T Consensus 160 ~~~~~~p~~~~~~~~~~~---~~~~~~~~~~le~~i~~--~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g 234 (447)
T PRK06917 160 YPTISAPYCYRCPVQKVY---PTCQLACATELETAIER--IGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYD 234 (447)
T ss_pred CeEeCCCcccccccCCCh---HHHHHHHHHHHHHHHHh--cCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcC
Confidence 344556666665544322 34455677888887764 23468999999999995 78999999999999999
Q ss_pred -------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc-ccccceecHHHHHhhhcCC--cccccCCCCcHHHH
Q psy6205 121 -------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH-PVAAVITTKEIAKSFQETG--VEYFNTYGGNPVSC 190 (224)
Q Consensus 121 -------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~-p~~av~~~~~i~~~~~~~~--~~~~~T~~~~p~~~ 190 (224)
|+|||||||+ +|+++++| |+|||+|+||+||||+ |+||+++++++++.+.... ..|++||+|||++|
T Consensus 235 ~llI~DEv~tGfGRtG~-~~a~~~~g--v~PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~ 311 (447)
T PRK06917 235 ILFIADEVMTGLGRTGA-MFAMEHWG--VEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSA 311 (447)
T ss_pred CEEEEechhhCcCcccc-hhhHHhcC--CCCCEEEeeehhccCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHH
Confidence 9999999997 89999998 9999999999999995 9999999999999986432 23568999999999
Q ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 191 AVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 191 aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+++++|++|++++++++++++|++|+++|+++
T Consensus 312 aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l 344 (447)
T PRK06917 312 ATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKV 344 (447)
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999875
No 29
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=1.9e-37 Score=299.29 Aligned_cols=170 Identities=39% Similarity=0.775 Sum_probs=146.6
Q ss_pred ceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-----
Q psy6205 46 MSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH----- 120 (224)
Q Consensus 46 ~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----- 120 (224)
.++.++.|+.||++|+.+ +...+|.+++++.++.+..+++++||||+|||||++|+++||++|+++++++
T Consensus 704 ~v~~~~~p~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g 778 (972)
T PRK06149 704 WVHPVESPNTYRGRFRGA-----DSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARG 778 (972)
T ss_pred CeEEeCCCcccCCcCCCc-----ccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcC
Confidence 345567788888776532 1233556666666665444678999999999999999999999999999999
Q ss_pred -------HHhCCccccccchhhhhcCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHH
Q psy6205 121 -------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVA 193 (224)
Q Consensus 121 -------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa 193 (224)
|||||||||++||++|++| |+|||+||||+||||+|+||+++++++++.+.... .+++||+|||++||++
T Consensus 779 ~llI~DEV~tGfGRtG~~~~a~e~~g--v~PDivt~gK~lg~G~Pl~av~~~~~i~~~~~~~~-~~~sT~~gnP~~~aaa 855 (972)
T PRK06149 779 GVCIADEVQVGYGRLGHYFWGFEQQG--VVPDIITMAKGMGNGHPLGAVITRREIAEALEAEG-YFFSSTGGSPVSCRIG 855 (972)
T ss_pred CEEEEEeehhcCCccCccchhhhhcC--CCCCEEEecccccCCeeeEEEEEcHHHHhhhccCC-cccCCCCCCHHHHHHH
Confidence 9999999997578999998 99999999999999999999999999999986532 4668999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 194 NAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 194 ~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++|++|+++++.++++++|++|+++|+++
T Consensus 856 la~L~~i~~e~l~~~~~~~G~~l~~~L~~l 885 (972)
T PRK06149 856 MAVLDVLREEKLQENARRVGDHLKARLEAL 885 (972)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999875
No 30
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-37 Score=277.54 Aligned_cols=146 Identities=32% Similarity=0.551 Sum_probs=131.6
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
++++++.++....+++++||||+|||||++|+++||++||++++++ |||||||||+ +|+++++| |
T Consensus 215 ~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~-~~a~e~~g--v 291 (459)
T PRK11522 215 IEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGK-MFACEHEN--V 291 (459)
T ss_pred HHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccch-hhhhhccC--C
Confidence 3556666654434567899999999999999999999999999999 9999999997 89999998 9
Q ss_pred CCchhcccccccCC-cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 143 IPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 143 ~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
+|||+||||+|||| +|+||+++++++++.+......|++||+|||++||+++++|++|+++++.++++++|++|+++|+
T Consensus 292 ~PDivt~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~ 371 (459)
T PRK11522 292 QPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFR 371 (459)
T ss_pred CCCEEEechhhhCCCccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 99999999999999 69999999999999875433467899999999999999999999999999999999999999998
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 372 ~l 373 (459)
T PRK11522 372 QL 373 (459)
T ss_pred HH
Confidence 75
No 31
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=4.8e-37 Score=275.64 Aligned_cols=169 Identities=31% Similarity=0.493 Sum_probs=144.0
Q ss_pred cCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH
Q psy6205 41 RPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH 120 (224)
Q Consensus 41 ~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~ 120 (224)
.+...++.+++.|++|+++++.. +.+...|+++++++++. .+++||||+|||||+ |+++||++|++++|++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~i~~----~~~vAavIvEPv~g~-g~~~~~~~yl~~lr~l 257 (459)
T PRK06082 187 GPLMAGVERIPPAVSYRGAFPDA----DGSDVHYADYLEYVIEK----EGGIGAFIAEAVRNT-DVQVPSKAYWKRVREI 257 (459)
T ss_pred CCCCCCCEEeCCCcccccccCCh----hHHHHHHHHHHHHHHhc----CCCEEEEEECCccCC-CCcCCCHHHHHHHHHH
Confidence 34445566778888888776432 34456678888888762 358999999999998 5788999999999999
Q ss_pred ------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-cccccceecHHHHHhhhcCCcccccCCCCcH
Q psy6205 121 ------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQETGVEYFNTYGGNP 187 (224)
Q Consensus 121 ------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p 187 (224)
|+|||||||+ ||+++++| ++|||+|+||+|||| +|+|++++++++++.+. ....+ +||+|||
T Consensus 258 c~~~g~llI~DEV~tG~GRtG~-~fa~e~~g--v~PDiv~~gKgl~gG~~P~~av~~~~~i~~~~~-~~~~~-~T~~gnp 332 (459)
T PRK06082 258 CDKHNVLLIIDEIPNGMGRTGE-WFTHQAYG--IEPDILCIGKGLGGGLVPIAAMITKDKYNTAAQ-ISLGH-YTHEKSP 332 (459)
T ss_pred HHHcCCEEEEechhhCCCccch-hhHhHhhC--CCCCEEEecccccCCCCcceEEEEcHHHHhhcc-CCCCC-CCCCcCH
Confidence 9999999997 89999998 999999999999999 59999999999987653 22234 8999999
Q ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 188 VSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 188 ~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
++||+++++|+++++++++++++++|++|+++|+++
T Consensus 333 l~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l 368 (459)
T PRK06082 333 LGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEM 368 (459)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999864
No 32
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=4.4e-37 Score=275.05 Aligned_cols=171 Identities=26% Similarity=0.462 Sum_probs=144.4
Q ss_pred CcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH---
Q psy6205 44 VRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--- 120 (224)
Q Consensus 44 ~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--- 120 (224)
..++.++++|++++++++... +.+.+.+.+.+++.++.+....+++||||+||+||++|+++||++|+++++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~ 238 (442)
T TIGR00709 162 MPGVQFMPYPHEYRCPFGIGG---EAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRK 238 (442)
T ss_pred CCCcEEeCCCccccccccCCc---hhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 344556677777777765322 33444555556666654444567899999999999999999999999999999
Q ss_pred ---------HHhCCccccccchhhhhcCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHH
Q psy6205 121 ---------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCA 191 (224)
Q Consensus 121 ---------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~a 191 (224)
|||||||||+ +|+++++| ++|||+|+||+||||+|+|+++++++ ++.+.. ..|.+||+|||++||
T Consensus 239 ~g~llI~DEV~tGfGRtG~-~~a~~~~g--v~PDiv~~gK~l~~G~Pigav~~~~~-~~~~~~--~~~~~T~~gnpla~a 312 (442)
T TIGR00709 239 HDIKLILDEVQAGFGRSGT-MFAFEHAG--IEPDFVVMSKAVGGGLPLAVLLIAPE-FDAWQP--AGHTGTFRGNQLAMV 312 (442)
T ss_pred cCCEEEEeccccCCCCCCc-hhHHHHcC--CCCcEEEEcccccCCcccEEEEEchH-HhccCC--CcCCCCCCcCHHHHH
Confidence 9999999997 89999998 99999999999999999999999999 566643 257799999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 192 VANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 192 aa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
||+++|++++++++.++++++|++|+++|+++
T Consensus 313 aa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l 344 (442)
T TIGR00709 313 TGTEALNYWKDDNLAQNAQERGERITSFLDDM 344 (442)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999864
No 33
>KOG1401|consensus
Probab=100.00 E-value=1e-37 Score=265.70 Aligned_cols=199 Identities=25% Similarity=0.390 Sum_probs=159.2
Q ss_pred EEEEeecCCCCCCccccchhhhccCCC-----cceeecCCCccccCCCCC-----------CCCC--ChhHHHHH---HH
Q psy6205 18 GVELVTCRKQKTPATSEAQHVITRPPV-----RMSTEAPCPDVYRGKYPA-----------DKYP--DEDLGVKY---AQ 76 (224)
Q Consensus 18 gielv~~~~t~~p~~~~a~~l~~~~~~-----~~~~~vp~P~~yr~~~~~-----------~~~~--~~~~~~~~---~~ 76 (224)
.+|.|.+.++++++...+.+.+++... ..+.++.+-++||+..-. .+.+ .++..... ..
T Consensus 115 ~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t 194 (433)
T KOG1401|consen 115 SAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDST 194 (433)
T ss_pred CccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHH
Confidence 567777777888777665554444321 123356667778764310 0000 12222222 34
Q ss_pred HHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCC
Q psy6205 77 DVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIP 144 (224)
Q Consensus 77 ~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~p 144 (224)
+++++++ .+.++|||||+|||||+||++++.|+|++.||+. |||||||+|. .|++++++ ++|
T Consensus 195 ~l~k~~~---~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~-~~a~e~~~--~~P 268 (433)
T KOG1401|consen 195 ALEKLFE---SHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGY-GWAQEYFG--VTP 268 (433)
T ss_pred HHHHHHH---hCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccch-HHHHHHhC--cCC
Confidence 5555555 5788999999999999999999999999999999 9999999997 89999998 999
Q ss_pred chhcccccccCCcccccceecHHHHHhhhcCC-cccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh
Q psy6205 145 DIVTVGKPMGNGHPVAAVITTKEIAKSFQETG-VEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 145 Di~~~~K~l~~G~p~~av~~~~~i~~~~~~~~-~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~ 222 (224)
||.|+||.||||+|+||++++++|++.+.... ..|++||+|||++|+++..+|+.+.++...+++.++++.|+++|.+
T Consensus 269 DI~t~aK~L~gGlPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e 347 (433)
T KOG1401|consen 269 DITTVAKPLGGGLPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDE 347 (433)
T ss_pred cceeehhhccCCceeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998653 4568999999999999999999999999999999999999999875
No 34
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.1e-36 Score=272.22 Aligned_cols=172 Identities=27% Similarity=0.453 Sum_probs=145.5
Q ss_pred CcceeecCCCc-cccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--
Q psy6205 44 VRMSTEAPCPD-VYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-- 120 (224)
Q Consensus 44 ~~~~~~vp~P~-~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-- 120 (224)
.....++|.|+ ++++++.... +++...++++|+++++. .+++++||||+|||||++|+++|+++|++++|++
T Consensus 172 ~~~~~~~p~~~~~~~~~~~~~~---~~~~~~~~~~le~~l~~--~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~ 246 (442)
T PRK13360 172 LPGVDHLPHTLDLARNAFSKGQ---PEHGAELADELERLVTL--HDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICD 246 (442)
T ss_pred CCCCEEeCCCchhhccccCCCh---HHHHHHHHHHHHHHHHh--cCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHH
Confidence 33444556553 4555543322 45556778888888864 2457899999999999999999999999999999
Q ss_pred ----------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-cccccceecHHHHHhhhcCC-----cccccCCC
Q psy6205 121 ----------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQETG-----VEYFNTYG 184 (224)
Q Consensus 121 ----------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~~-----~~~~~T~~ 184 (224)
|+|||||||+ +|+++++| ++|||+|+||+|+|| +|+||+++++++++.+.... ..+.+||+
T Consensus 247 ~~g~llI~DEv~tG~GrtG~-~~a~~~~g--v~PDivt~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~ 323 (442)
T PRK13360 247 KHGILLIFDEVITGFGRLGA-PFAAQYFG--VTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYS 323 (442)
T ss_pred HcCCEEEEechhhCCCCCcc-chhhhhcC--CCCceeeeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCC
Confidence 9999999997 89999998 999999999999999 79999999999999886431 23668999
Q ss_pred CcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 185 GNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 185 ~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+||++||+++++|++|+++++.++++++|++|+++|+++
T Consensus 324 g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~l~~l 362 (442)
T PRK13360 324 GHPLACAAALATLDLYEREGLLTRAARLAPYWEDALHSL 362 (442)
T ss_pred CCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999864
No 35
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=6.5e-37 Score=274.07 Aligned_cols=130 Identities=33% Similarity=0.595 Sum_probs=123.6
Q ss_pred CCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC
Q psy6205 89 GKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG 156 (224)
Q Consensus 89 ~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G 156 (224)
+++|||||+||+||++|+++|+++||+++|++ |+|||||||+ +|+++++| ++|||+|+||+||||
T Consensus 217 ~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~-~fa~~~~g--v~PDiv~~gK~l~~G 293 (443)
T PRK06058 217 ADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGA-WFACEHEG--IVPDLITTAKGIAGG 293 (443)
T ss_pred CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChh-hhHHHhcC--CCCCEEEEcccccCC
Confidence 57899999999999999999999999999999 9999999997 89999998 999999999999999
Q ss_pred cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 157 HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 157 ~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|+|++++++++++.+... .+.+||+|||++||||+++|++++++++.++++++|++|+++|+++
T Consensus 294 ~Pi~av~~~~~i~~~~~~~--~~~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l 358 (443)
T PRK06058 294 LPLSAVTGRAEIMDAPHPG--GLGGTYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRAL 358 (443)
T ss_pred CccEEEEEcHHHHhhccCC--CCCCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988644 5789999999999999999999999999999999999999999874
No 36
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.3e-36 Score=271.90 Aligned_cols=174 Identities=26% Similarity=0.447 Sum_probs=147.1
Q ss_pred CCCcceeecCCCc-cccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH
Q psy6205 42 PPVRMSTEAPCPD-VYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH 120 (224)
Q Consensus 42 ~~~~~~~~vp~P~-~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~ 120 (224)
+...+..++++|+ ++++++.... +++.+.++++++++++.. +.+++||||+|||||++|++.||++|+++++++
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~i~~~--~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~l 247 (445)
T PRK09221 173 GLLPGVDHLPHTLDLPENAFSKGQ---PEHGAELADDLERLVALH--DASTIAAVIVEPMAGSAGVLVPPKGYLQRLREI 247 (445)
T ss_pred CCCCCCeEeCCCccccccccCCCh---HHHHHHHHHHHHHHHHhc--CCCcEEEEEEecccCCCCcccCCHHHHHHHHHH
Confidence 3334455566665 5555544322 455566788888888642 347999999999999999999999999999999
Q ss_pred ------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-cccccceecHHHHHhhhcC-----CcccccC
Q psy6205 121 ------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQET-----GVEYFNT 182 (224)
Q Consensus 121 ------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~-----~~~~~~T 182 (224)
|+|||||||+ +|+++++| ++|||+|+||+|+|| +|+|++++++++++.+... ...|.+|
T Consensus 248 c~~~g~llI~DEV~tG~GRtG~-~~~~~~~g--v~PDi~~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T 324 (445)
T PRK09221 248 CDKHGILLIFDEVITGFGRLGA-AFAAERFG--VTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYT 324 (445)
T ss_pred HHHcCCEEEEeehhhCCCcCch-hhHHHhcC--CCCCEEEeccccccCcccceeeEEcHHHHHhhccCcccccccccccC
Confidence 9999999997 89999998 999999999999999 7999999999999988542 1236689
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 183 YGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 183 ~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|++||++||+++++|++++++++.++++++|++|+++|+++
T Consensus 325 ~~~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~l 365 (445)
T PRK09221 325 YSAHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSL 365 (445)
T ss_pred CCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999875
No 37
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-36 Score=270.14 Aligned_cols=173 Identities=29% Similarity=0.545 Sum_probs=148.7
Q ss_pred CCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-
Q psy6205 42 PPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH- 120 (224)
Q Consensus 42 ~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~- 120 (224)
+...++.++|+|+.|++++.... ++....++++++++++.. ..++++||||+||+||++|+++||++|+++++++
T Consensus 162 ~~~~~~~~~~~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc 237 (445)
T PRK08593 162 PLLPGFVHIPFPDKYRGMYEEPD---ANFVEEYLAPLKEMFEKY-LPADEVACIVIETIQGDGGLLEPVPGYFEALYKFC 237 (445)
T ss_pred CCCCCcEEeCCCccccccccCCc---HHHHHHHHHHHHHHHHhh-cCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHH
Confidence 33445666777887777654332 445666778888777542 1357899999999999999999999999999999
Q ss_pred -----------HHhCCccccccchhhhhcCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHH
Q psy6205 121 -----------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVS 189 (224)
Q Consensus 121 -----------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~ 189 (224)
|+|||||||+ +|+++++| ++|||+|+||++|||+|+|++++++++++.+... .+.+||++||++
T Consensus 238 ~~~g~llI~DEv~tg~GrtG~-~~a~~~~g--v~pDi~t~gK~l~~G~p~gav~~~~~i~~~~~~~--~~~~T~~~~pl~ 312 (445)
T PRK08593 238 REHGILFAVDDIQQGLGRTGK-WSSISHFN--ITPDLMSFGKSLAGGMPMSAIVGRKEIMESLEAP--AHLFTTGANPVS 312 (445)
T ss_pred HHcCCEEEEechhhCCCcCch-HHHHHhcC--CCCCEeeecccccCCcccEEEEEcHHHHhhhccC--CCCCCCCCCHHH
Confidence 9999999997 88999998 9999999999999999999999999999988533 567899999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 190 CAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 190 ~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
||+++++|+++++++++++++++|++|+++|+++
T Consensus 313 ~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l 346 (445)
T PRK08593 313 CAAALATIDMIEDESLLQRSAEKGEYARKRFDQW 346 (445)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999864
No 38
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=4.4e-36 Score=269.49 Aligned_cols=176 Identities=30% Similarity=0.472 Sum_probs=151.6
Q ss_pred ccCCCcceeecCCCccccCC-CCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHH
Q psy6205 40 TRPPVRMSTEAPCPDVYRGK-YPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVY 118 (224)
Q Consensus 40 ~~~~~~~~~~vp~P~~yr~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~ 118 (224)
+.+...++.++|.|++|+++ ++.+. +++...|++.++++++. .+++++||||+|||||++|++++|++|+++++
T Consensus 174 ~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~l~~--~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~ 248 (460)
T PRK06541 174 FEPLVPGGFRVPNTNFYRAPELGDDP---EAFGRWAADRIEEAIEF--EGPDTVAAVFLEPVQNAGGCFPPPPGYFERVR 248 (460)
T ss_pred cCCCCCCcEEeCCCccccccccCCCH---HHHHHHHHHHHHHHHHh--cCCCCEEEEEECCccCCCCCccCCHHHHHHHH
Confidence 34445567778888888876 43221 45566778888888864 24679999999999999999999999999999
Q ss_pred HH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc-ccccceecHHHHHhhhcCC--cccccCC
Q psy6205 119 KH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH-PVAAVITTKEIAKSFQETG--VEYFNTY 183 (224)
Q Consensus 119 ~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~-p~~av~~~~~i~~~~~~~~--~~~~~T~ 183 (224)
++ |+|||||||+ +|+++++| ++|||+|+||+||||+ |+|++++++++++.+.... ..|.+||
T Consensus 249 ~lc~~~g~llI~DEV~tGfGR~G~-~~a~~~~g--v~PDivt~gK~l~~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~ 325 (460)
T PRK06541 249 EICDRYDVLLVSDEVICAFGRLGE-MFGCERFG--YVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHGYTF 325 (460)
T ss_pred HHHHHcCCEEEEechhhCCCcCch-hhhhhhcC--CCCCEEEecccccCCccceeEEEEcHHHHHHhhcCCCccccCCCC
Confidence 99 9999999997 89999998 9999999999999996 9999999999999886431 2356899
Q ss_pred CCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 184 GGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 184 ~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
++||++||+++++|++++++++.++++++|++|+++|+++
T Consensus 326 ~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~~L~~l 365 (460)
T PRK06541 326 GGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRATLEKL 365 (460)
T ss_pred CCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999875
No 39
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.8e-35 Score=263.45 Aligned_cols=148 Identities=27% Similarity=0.463 Sum_probs=132.6
Q ss_pred HHHHHHHHHHHHHHHHccCCCCceEEEEccc-cCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhh
Q psy6205 70 LGVKYAQDVQDLIEAMGRNGKRPCAFFAESL-QSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQ 136 (224)
Q Consensus 70 ~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv-~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~ 136 (224)
+.+.+++.|++.++. ++++|||||+||+ ||++|+++||++|+++++++ |+|||||||+ +|+++
T Consensus 188 ~~~~~l~~l~~~i~~---~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~-~~a~~ 263 (429)
T PRK06173 188 WNDEAIEPLQDLLEQ---KGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGK-LFALE 263 (429)
T ss_pred HHHHHHHHHHHHHHh---CCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCc-chHHH
Confidence 344567778777752 5679999999997 99999999999999999999 9999999997 89999
Q ss_pred hcCCCCCCchhcccccccCC-cccccceecHHHHHhhhcC---CcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHH
Q psy6205 137 LQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQET---GVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDV 212 (224)
Q Consensus 137 ~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~---~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~ 212 (224)
++| ++|||+||||+|+|| +|+|++++++++++.+.+. ...|++||++||++||+++++|++++++++.++++++
T Consensus 264 ~~g--v~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~~~~~~ 341 (429)
T PRK06173 264 HAG--VVPDIMCIGKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRI 341 (429)
T ss_pred hcC--CCCCEEEeehhhhCCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 998 999999999999999 5999999999999988642 1357789999999999999999999999999999999
Q ss_pred HHHHHHhhhhc
Q psy6205 213 GNQLHTPKKEN 223 (224)
Q Consensus 213 g~~l~~~l~~l 223 (224)
|++|+++|+++
T Consensus 342 g~~l~~~L~~~ 352 (429)
T PRK06173 342 EAQLKQELAPA 352 (429)
T ss_pred HHHHHHHHHHh
Confidence 99999999854
No 40
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=1.7e-35 Score=278.52 Aligned_cols=149 Identities=21% Similarity=0.357 Sum_probs=128.6
Q ss_pred hHHHHHHHHHHHHHHHHc--cCCCCceEEEEccc-cCCCCcccCCHHHHHHHHHH------------HHhCCccccccch
Q psy6205 69 DLGVKYAQDVQDLIEAMG--RNGKRPCAFFAESL-QSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWW 133 (224)
Q Consensus 69 ~~~~~~~~~l~~~~~~~~--~~~~~iaavi~Epv-~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~ 133 (224)
++.+.|++++++.++... .++++|||||+||+ ||+||+++|+++|++.+|++ |+|||||||+ +|
T Consensus 560 ~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~-~f 638 (817)
T PLN02974 560 PLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGV-ES 638 (817)
T ss_pred hhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccc-hh
Confidence 455677888888886432 24678999999995 99999999999999999999 9999999997 89
Q ss_pred hhhhcCCCCCCchhcccccccCC-cccccceecHHHHHhhhcC----CcccccCCCCcHHHHHHHHHHHHHHhhh----h
Q psy6205 134 AFQLQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQET----GVEYFNTYGGNPVSCAVANAVMEVLETE----N 204 (224)
Q Consensus 134 ~~~~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~----~~~~~~T~~~~p~~~aaa~a~l~~~~~~----~ 204 (224)
+++++| |+|||+|+||+|||| +|+||++++++|++.|... ...|++||+|||++||||+++|++|+++ +
T Consensus 639 a~e~~g--v~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~ 716 (817)
T PLN02974 639 AWELLG--CKPDIACYAKLLTGGLVPLAATLATEEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPN 716 (817)
T ss_pred hHHhcC--CCCCEEeecccccCCCCccEEEEEcHHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHH
Confidence 999998 999999999999999 5999999999999999632 2347899999999999999999999987 5
Q ss_pred HHHHHHHHHHHHHHhh
Q psy6205 205 LREHALDVGNQLHTPK 220 (224)
Q Consensus 205 l~~~~~~~g~~l~~~l 220 (224)
+.++.++++++|.++|
T Consensus 717 l~~~~~~l~~~l~~~l 732 (817)
T PLN02974 717 LIPPGSRLRELWDEEL 732 (817)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5555666667777666
No 41
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=7.7e-35 Score=258.98 Aligned_cols=144 Identities=28% Similarity=0.442 Sum_probs=129.4
Q ss_pred HHHHHHHHHHHHHHHccCCCCceEEEEccc-cCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhh
Q psy6205 71 GVKYAQDVQDLIEAMGRNGKRPCAFFAESL-QSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQL 137 (224)
Q Consensus 71 ~~~~~~~l~~~~~~~~~~~~~iaavi~Epv-~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~ 137 (224)
.+.|++.+++++. +++||||+||+ ||++|+++|+++|++++|++ |+|||||||+ +|++++
T Consensus 186 ~~~~~~~~~~~~~------~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~-~~a~~~ 258 (422)
T PRK05630 186 ISEYLRSLELLID------ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGE-LFATLA 258 (422)
T ss_pred HHHHHHHHHHHHh------hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCch-hhHHHh
Confidence 4556677776663 58999999996 99999999999999999999 9999999997 899999
Q ss_pred cCCCCCCchhcccccccCC-cccccceecHHHHHhhhcC----CcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHH
Q psy6205 138 QGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQET----GVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDV 212 (224)
Q Consensus 138 ~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~----~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~ 212 (224)
+| |+|||+||||+|||| +|+||+++++++++.+... ...|++||+|||++||+++++|++++++++.++++++
T Consensus 259 ~g--v~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~~ 336 (422)
T PRK05630 259 AG--VTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRI 336 (422)
T ss_pred cC--CCCCeeeeechhhcCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 98 999999999999999 5999999999999988632 1256799999999999999999999999999999999
Q ss_pred HHHHHHhhhhc
Q psy6205 213 GNQLHTPKKEN 223 (224)
Q Consensus 213 g~~l~~~l~~l 223 (224)
+++|+++|+++
T Consensus 337 g~~l~~~L~~l 347 (422)
T PRK05630 337 EAELIAGLSPL 347 (422)
T ss_pred HHHHHHHHHHh
Confidence 99999988754
No 42
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=7e-35 Score=259.47 Aligned_cols=145 Identities=30% Similarity=0.492 Sum_probs=130.2
Q ss_pred HHHHHHHHHHHHHccCCCCceEEEEccc-cCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcC
Q psy6205 73 KYAQDVQDLIEAMGRNGKRPCAFFAESL-QSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQG 139 (224)
Q Consensus 73 ~~~~~l~~~~~~~~~~~~~iaavi~Epv-~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g 139 (224)
.+++++++.++ ..+++++|||+||+ ||++|+++|+++||++++++ |+|||||||+ +|+++++|
T Consensus 189 ~d~~~l~~~l~---~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~-~fa~~~~g 264 (428)
T PRK07986 189 RDIAPFARLMA---AHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGK-LFACEHAG 264 (428)
T ss_pred HHHHHHHHHHH---hCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCC-eeeecccC
Confidence 34566666665 35678999999996 99999999999999999999 9999999997 89999998
Q ss_pred CCCCCchhcccccccCC-cccccceecHHHHHhhhcCC---cccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q psy6205 140 DDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQETG---VEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQ 215 (224)
Q Consensus 140 ~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~~---~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~ 215 (224)
++|||+|+||+|+|| +|+||+++++++++.+.... ..|++||+|||++||+++++|+++++++++++++++|++
T Consensus 265 --v~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~ 342 (428)
T PRK07986 265 --IAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQ 342 (428)
T ss_pred --CCCCEEEechhhhCCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999999999999 59999999999999986531 236799999999999999999999999999999999999
Q ss_pred HHHhhhhc
Q psy6205 216 LHTPKKEN 223 (224)
Q Consensus 216 l~~~l~~l 223 (224)
|+++|+++
T Consensus 343 l~~~l~~l 350 (428)
T PRK07986 343 LREELAPL 350 (428)
T ss_pred HHHHHHHH
Confidence 99999875
No 43
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=9.6e-35 Score=259.05 Aligned_cols=142 Identities=27% Similarity=0.358 Sum_probs=128.1
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
++.+++.++ ++++++||||+|||||++|+++||++|+++++++ |+||| |||. +|+++++| +
T Consensus 187 ~~~l~~~l~---~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~-~~a~~~~g--v 259 (428)
T PRK12389 187 IEALKEALD---KWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMY-GGAQDLLG--V 259 (428)
T ss_pred HHHHHHHHH---hcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCc-chhhHHhC--C
Confidence 455666665 3567899999999999999999999999999999 99999 9996 78899998 9
Q ss_pred CCchhcccccccCCcccccceecHHHHHhhhcC-CcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 143 IPDIVTVGKPMGNGHPVAAVITTKEIAKSFQET-GVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 143 ~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~-~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
+|||+|+||+||||+|+||+++++++++.+... ...+++||+|||++|||++++|++|++++++++++++|++|+++|+
T Consensus 260 ~PDivt~gK~lggG~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~ 339 (428)
T PRK12389 260 EPDLTALGKIIGGGLPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGIL 339 (428)
T ss_pred CCCeeeechhhcCCCceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998532 2357789999999999999999999999999999999999999998
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 340 ~l 341 (428)
T PRK12389 340 EA 341 (428)
T ss_pred HH
Confidence 64
No 44
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-34 Score=256.19 Aligned_cols=171 Identities=32% Similarity=0.528 Sum_probs=145.1
Q ss_pred CcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH---
Q psy6205 44 VRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--- 120 (224)
Q Consensus 44 ~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--- 120 (224)
..++.++|+|++++++.... .++....++++++++++.. ..++++||||+|||||++|+++|+++|+++++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~~-~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~ 239 (433)
T PRK08117 164 LGSVYQAPYPYCDRCPKGED---PEVCFLECLRDLESLFKHQ-VTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDR 239 (433)
T ss_pred CCCcEEeCCCccccccccCc---hhHHHHHHHHHHHHHHHhc-cCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHH
Confidence 34455666777666554321 1334445677888877642 1457899999999999999999999999999999
Q ss_pred ---------HHhCCccccccchhhhhcCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHH
Q psy6205 121 ---------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCA 191 (224)
Q Consensus 121 ---------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~a 191 (224)
|+|||||+|+ +|+++++| ++|||+|+||+||||+|+|++++++++++.+... .+.+||++||++|+
T Consensus 240 ~g~llI~DEv~tG~gr~G~-~~~~~~~g--v~pDi~t~sK~lg~G~pigav~~~~~i~~~~~~~--~~~~T~~~np~~~a 314 (433)
T PRK08117 240 HGILLIFDEVQTGFGRTGE-WFAAQTFG--VVPDIMTIAKGIASGLPLSAVVASKELMEQWPLG--SHGTTFGGNPVACA 314 (433)
T ss_pred cCCEEEEecchhccCcccc-chhHhhcC--CCCCEeehhhhccCCCcceeEEEcHHHHhhccCC--CCCCCCCcCHHHHH
Confidence 9999999997 78889998 9999999999999999999999999999988543 57899999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 192 VANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 192 aa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++++|++++++++++++++++++|+++|+++
T Consensus 315 aa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l 346 (433)
T PRK08117 315 AALATLEVIKEEKLLDNANEMGAYALERLEVL 346 (433)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 99999999988899999999999999999865
No 45
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-34 Score=256.84 Aligned_cols=172 Identities=34% Similarity=0.536 Sum_probs=145.1
Q ss_pred CCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHH-HHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH
Q psy6205 42 PPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQD-LIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH 120 (224)
Q Consensus 42 ~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~ 120 (224)
+...++.++++|+.|+++++... .+++.+.+++.+++ +++.. .+++++||||+|||||++|+++|+++|+++++++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~le~~~~~~~-~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l 250 (441)
T PRK05769 174 PLMPGVIHVPYPNPYRNPWGIEN--PEECGNAVLDFIEDYLFKKL-VPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKL 250 (441)
T ss_pred CCCCCeEEeCCCccccccccCCc--hHHHHHHHHHHHHHHHHhhc-cCCCceEEEEECcccCCCCCcCCCHHHHHHHHHH
Confidence 33445667777777777665221 24455667788887 44321 2467899999999999999999999999999999
Q ss_pred ------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHH
Q psy6205 121 ------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPV 188 (224)
Q Consensus 121 ------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~ 188 (224)
|+|||||||+ +|+++++| +.|||+|+||+++||+|+|++++++++++.+ . ..+.+||++||+
T Consensus 251 ~~~~g~lli~DEv~tG~gr~G~-~~a~~~~g--v~pDivt~~K~l~~G~p~gav~~~~~i~~~~-~--~~~~~T~~g~p~ 324 (441)
T PRK05769 251 ADKYGILLIDDEVQTGMGRTGK-MFAIEHFG--VEPDIITLAKAIAGGLPLGAVIGRAELMFLP-P--GSHANTFGGNPV 324 (441)
T ss_pred HHHcCCEEEEechhhCCCcccc-eehhhccC--CCCCEEEEcccccCCcccEEEEEehhhhhcC-C--CCCCCCCCcCHH
Confidence 9999999997 88999998 9999999999999999999999999998644 2 257899999999
Q ss_pred HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 189 SCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 189 ~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|++++++|+++++ +++++++++|++|+++|+++
T Consensus 325 ~~aaa~a~L~~l~~-~~~~~~~~~g~~l~~~L~~l 358 (441)
T PRK05769 325 AAAAALATLEELEE-GLLENAQKLGEYLRKELKEL 358 (441)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999 99999999999999999864
No 46
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=3.4e-35 Score=264.02 Aligned_cols=198 Identities=23% Similarity=0.269 Sum_probs=157.7
Q ss_pred EEEEeecCCCCCCccccchhhhccCCCcceeecCCCccccCCCCC----------------C-CCCC---hhHH-H--HH
Q psy6205 18 GVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPCPDVYRGKYPA----------------D-KYPD---EDLG-V--KY 74 (224)
Q Consensus 18 gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~P~~yr~~~~~----------------~-~~~~---~~~~-~--~~ 74 (224)
++|.+.+..+++++...+.+++.. .+.+...+.+.++||++... . ..+. ++.. . ..
T Consensus 154 ~~~~v~f~~SGsEA~e~AlklAR~-~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd 232 (474)
T PLN02482 154 SVEMVRFVNSGTEACMGVLRLARA-YTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYND 232 (474)
T ss_pred CCCEEEEeCChHHHHHHHHHHHHH-hcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCC
Confidence 457777888888888777776654 23444455566677775410 0 0000 0000 0 01
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
+++++++++ .+++++||||+|||||++|+++|+++||+.++++ |+||| |+|. +|+++++| +
T Consensus 233 ~~~l~~~l~---~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~-~ga~~~~g--v 305 (474)
T PLN02482 233 LEAVKKLFE---ANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAY-GGAQEYFG--I 305 (474)
T ss_pred hHHHHHHHH---hCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCc-chHhHHhC--C
Confidence 355565554 3678999999999999999999999999999999 99999 9997 89999998 9
Q ss_pred CCchhcccccccCCcccccceecHHHHHhhhcC-CcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 143 IPDIVTVGKPMGNGHPVAAVITTKEIAKSFQET-GVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 143 ~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~-~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
+|||+||||+||||+|+||+++++++++.+... ...+.+||+|||++|||++++|++|++++++++++++|++|+++|+
T Consensus 306 ~PDi~t~gK~lggG~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~ 385 (474)
T PLN02482 306 TPDLTTLGKVIGGGLPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGIL 385 (474)
T ss_pred CCCEEEecchhhCCCceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998643 2346789999999999999999999999999999999999999998
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 386 ~l 387 (474)
T PLN02482 386 EA 387 (474)
T ss_pred HH
Confidence 75
No 47
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=2.7e-34 Score=249.38 Aligned_cols=203 Identities=26% Similarity=0.305 Sum_probs=166.2
Q ss_pred ceeEEEEeecCCCCCCccccchhhhccCCCcceeecCCCccccCCCCCC------C-----CC-----ChhHHH----HH
Q psy6205 15 LFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPCPDVYRGKYPAD------K-----YP-----DEDLGV----KY 74 (224)
Q Consensus 15 l~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~------~-----~~-----~~~~~~----~~ 74 (224)
++..+|.++..+++++++..+.|+... .+.+...+-+-.|||+..+.. . .+ +++... --
T Consensus 105 ~~p~~e~vrfvnSGTEAtmsAiRlARa-~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~ 183 (432)
T COG0001 105 RVPSIEKVRFVNSGTEATMSAIRLARA-YTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLP 183 (432)
T ss_pred hcCcccEEEEecchhHHHHHHHHHHHH-hhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEec
Confidence 456679999999999999888887654 566677777788899866410 0 00 011111 11
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
.|+++++.+.+.+.+++|||||+|||+|+.|+++|.++|++.||++ |+||| |... .+++++|| |
T Consensus 184 yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGF-R~~~-gGaq~~~g--i 259 (432)
T COG0001 184 YNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGF-RVAL-GGAQGYYG--V 259 (432)
T ss_pred CCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhc-ccCC-cccccccC--c
Confidence 3555555555556789999999999999999999999999999999 99999 8885 67888998 9
Q ss_pred CCchhcccccccCCcccccceecHHHHHhhhcCC-cccccCCCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhh
Q psy6205 143 IPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETG-VEYFNTYGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLHTPK 220 (224)
Q Consensus 143 ~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~-~~~~~T~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~~l 220 (224)
+||+.||||.||||+|+||+.+++++|+.+.+.+ ....+||+|||++|+|++++|+.+++ +++++++.+++++|++.|
T Consensus 260 ~PDlttlGKiIGGGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl 339 (432)
T COG0001 260 EPDLTTLGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGL 339 (432)
T ss_pred CcchhhhhhhhcCCcceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999887654 33458999999999999999999987 569999999999999999
Q ss_pred hh
Q psy6205 221 KE 222 (224)
Q Consensus 221 ~~ 222 (224)
++
T Consensus 340 ~~ 341 (432)
T COG0001 340 RA 341 (432)
T ss_pred HH
Confidence 86
No 48
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=4.3e-33 Score=247.99 Aligned_cols=167 Identities=27% Similarity=0.423 Sum_probs=140.5
Q ss_pred eeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------
Q psy6205 47 STEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------ 120 (224)
Q Consensus 47 ~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------ 120 (224)
..+++.|++|++++... +.....+++.+++++.. ..++++|||||+|||||++|+++++++|+++|+++
T Consensus 158 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gi 232 (420)
T TIGR00700 158 VYRAPLPYPYRDGLLDK----QLSTDGELAAARAIFVI-DVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGI 232 (420)
T ss_pred cEEeCCCcccccccccc----chhHHHHHHHHHHHHHh-hcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 34455555555433211 12233466777776641 23568999999999999999999999999999999
Q ss_pred ------HHhCCccccccchhhhhcCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHH
Q psy6205 121 ------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVAN 194 (224)
Q Consensus 121 ------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~ 194 (224)
|+|||||+|+ +|++++++ ++|||+||||+++||+|+|++++++++++.+... .+.+||++||++|++++
T Consensus 233 llI~DEV~tg~gr~g~-~~a~~~~~--~~pDi~~lsK~l~~G~pig~v~~~~~i~~~~~~~--~~~~T~~~~pl~~aaa~ 307 (420)
T TIGR00700 233 VFIADEVQTGFARTGA-MFACEHEG--PEPDLITTAKSLADGLPLSGVTGRAEIMDAPAPG--GLGGTYAGNPLACAAAL 307 (420)
T ss_pred EEEEEecccCCcccch-hHHHhhcC--CCCCEEEeeccccCCcceEEEEecHHHHhhcCCC--CcCCCCCcCHHHHHHHH
Confidence 9999999997 88999998 9999999999999999999999999999988643 57799999999999999
Q ss_pred HHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 195 AVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 195 a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
++|++++++++.+++++++++|+++|+++
T Consensus 308 a~l~~l~~~~~~~~~~~~g~~l~~~L~~l 336 (420)
T TIGR00700 308 AVLAIIESEGLIERARQIGRLVTDRLTTL 336 (420)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999864
No 49
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3.6e-33 Score=248.58 Aligned_cols=145 Identities=32% Similarity=0.494 Sum_probs=131.4
Q ss_pred HHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCC
Q psy6205 73 KYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGD 140 (224)
Q Consensus 73 ~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~ 140 (224)
.++++++++++. ..+++++||||+||+||++|++++|++|+++++++ |+|||||+|+ +|+++++|
T Consensus 181 ~~~~~l~~~~~~-~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~-~~a~~~~g- 257 (425)
T PRK07495 181 QSLAALDKLFKA-DVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGK-LFAMEHHE- 257 (425)
T ss_pred HHHHHHHHHHHh-ccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCC-ceeecccC-
Confidence 456777777653 12457899999999999999999999999999999 9999999997 88999998
Q ss_pred CCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Q psy6205 141 DIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPK 220 (224)
Q Consensus 141 ~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l 220 (224)
++|||+||||+|+||+|+|++++++++++.+... .+.+||++||++||+++++|++++++++.++++++|++|+++|
T Consensus 258 -v~pDi~tlsK~l~~G~pigav~~~~~i~~~~~~~--~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L 334 (425)
T PRK07495 258 -VAADLTTMAKGLAGGFPLAAVTGRAEIMDAPGPG--GLGGTYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQRL 334 (425)
T ss_pred -CCCCEEeehhhhcCCccceEEEEcHHHHhccCCC--CcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988643 5779999999999999999999999999999999999999999
Q ss_pred hhc
Q psy6205 221 KEN 223 (224)
Q Consensus 221 ~~l 223 (224)
+++
T Consensus 335 ~~l 337 (425)
T PRK07495 335 ASL 337 (425)
T ss_pred HHH
Confidence 865
No 50
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=2.5e-33 Score=247.54 Aligned_cols=128 Identities=35% Similarity=0.550 Sum_probs=119.2
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~ 157 (224)
++++|||+||+|+++|+++|+++|+++++++ |+|||||||+ +|+++++| ++|||+|+||+||||+
T Consensus 178 ~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~-~~a~~~~g--v~PDi~t~gK~lg~G~ 254 (395)
T PRK03715 178 DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGT-LFAYELSG--IEPDIMTLGKGIGGGV 254 (395)
T ss_pred CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcc-hhhHhhcC--CCCceeeehhhhhCCc
Confidence 4799999999999999999999999999999 9999999997 89999998 9999999999999999
Q ss_pred ccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+|+++++++++. +... .+++||+|||++||+++++|++|+++++.++++++|++|+++|+++
T Consensus 255 p~~av~~~~~i~~-~~~~--~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l 317 (395)
T PRK03715 255 PLAALLAKAEVAV-FEAG--DQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLEL 317 (395)
T ss_pred ceEEEEEcccccc-ccCC--CcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999973 3222 4679999999999999999999999999999999999999999865
No 51
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=7.4e-33 Score=247.80 Aligned_cols=163 Identities=24% Similarity=0.378 Sum_probs=128.6
Q ss_pred eeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------
Q psy6205 47 STEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------ 120 (224)
Q Consensus 47 ~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------ 120 (224)
..++|+|+ +++++.......+.+...++++++++++. ++++|||||+|||||++|+++|+++||+.+|++
T Consensus 211 ~~~~p~p~-~~~~~~~~~~~~~~~~~~~l~~l~~~l~~---~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~ 286 (464)
T TIGR00699 211 WPQAPFPS-LKYPLEEHVKENAKEEQRCLEEVEDLIKK---WHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNV 286 (464)
T ss_pred ceecCCCC-cccccccccccchhHHHHHHHHHHHHHHh---cCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 34556665 44443211000133445678888888863 567899999999999999999999999999999
Q ss_pred ------HHhCCccccccchhhhhcCCCCC--Cchhccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHH
Q psy6205 121 ------VQVGFGRVGTHWWAFQLQGDDII--PDIVTVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCA 191 (224)
Q Consensus 121 ------v~tG~GrtG~~~~~~~~~g~~v~--pDi~~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~a 191 (224)
|||||||||+ ||+++++| |+ |||+|+||+|| ||+++ .++ .++.. ....+++||++||++||
T Consensus 287 lLI~DEV~tGfGrtG~-~fa~e~~g--v~~~PDi~t~gK~lg~gG~~~----~~~-~~~~~--~~~~~~~T~~gnp~~~a 356 (464)
T TIGR00699 287 AFIVDEVQTGVGATGK-FWAHEHWN--LDDPPDMVTFSKKFQTAGYFF----HDP-AFRPN--KPYRQFNTWMGDPSRAL 356 (464)
T ss_pred EEEEeeeeeCCCCCcc-hhHHHhcC--CCCCCCEEEehhhhccCCccc----cch-hccCC--CCcccccCCCCCHHHHH
Confidence 9999999997 89999998 86 99999999996 68743 232 22211 12357799999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 192 VANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 192 aa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++++|++++++++.++++++|++|+++|+++
T Consensus 357 aa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l 388 (464)
T TIGR00699 357 ILREIIQEIKRKDLLENVAHVGDYLYTGLEDL 388 (464)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999875
No 52
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=2.1e-32 Score=245.51 Aligned_cols=171 Identities=30% Similarity=0.518 Sum_probs=145.1
Q ss_pred CcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH---
Q psy6205 44 VRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--- 120 (224)
Q Consensus 44 ~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--- 120 (224)
..++.++|+|++|+++.+.. .+.+.+.+++.+++++... .++++|||||+||+||++|+++|+++|++.|+++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~ 251 (451)
T PRK06918 176 APEVYKAPFPYEYRRPEGLT---EEQYDDFMIEEFKNFFISE-VAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSE 251 (451)
T ss_pred CCCcEEcCCCccccccccCc---hHHHHHHHHHHHHHHHHhh-cCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHH
Confidence 34455567777776554321 1444556677777776432 1467999999999999999999999999999999
Q ss_pred ---------HHhCCccccccchhhhhcCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHH
Q psy6205 121 ---------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCA 191 (224)
Q Consensus 121 ---------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~a 191 (224)
|+|||||+|+ +|++++++ ++|||+++||++++|+|+|++++++++++.+... .+.+||++||++|+
T Consensus 252 ~gillI~DEV~tg~gr~g~-~~a~~~~~--v~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~~--~~~~T~~g~~l~~a 326 (451)
T PRK06918 252 HGILFVADEIQTGFARTGK-YFAIEHFD--VVPDLITVSKSLGAGVPISGVIGRKEIMDESAPG--ELGGTYAGSPLGCA 326 (451)
T ss_pred cCCEEEEeccccCcCccCc-eehhHhcC--CCCCEEeeehhhcCCCccEEEEEcHHHHhccCCC--CcCcCCCcCHHHHH
Confidence 9999999997 78999998 9999999999999999999999999999988543 57799999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 192 VANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 192 aa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++++|++++++++.+++++++++|+++|+++
T Consensus 327 aa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l 358 (451)
T PRK06918 327 AALAVLDIIEKENLNDRAIELGKVVMNRFEEM 358 (451)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999864
No 53
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=1.8e-32 Score=243.36 Aligned_cols=145 Identities=24% Similarity=0.407 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCC
Q psy6205 73 KYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGD 140 (224)
Q Consensus 73 ~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~ 140 (224)
.+++++++++++.....+++||||+|||||++|+++||++|+++++++ |||||||||+ +|++++++
T Consensus 176 ~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~-~~a~~~~~- 253 (412)
T TIGR02407 176 DTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGT-FFSFEPAG- 253 (412)
T ss_pred hHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch-hHHhcccC-
Confidence 346677777753212236899999999999999999999999999999 9999999997 89999998
Q ss_pred CCCCchhcccccccC-CcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHH
Q psy6205 141 DIIPDIVTVGKPMGN-GHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEV-LETENLREHALDVGNQLHT 218 (224)
Q Consensus 141 ~v~pDi~~~~K~l~~-G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~-~~~~~l~~~~~~~g~~l~~ 218 (224)
+.|||+|+||+||| |+|+|++++++++ +.+.. ..+.+||++||++|++++++|++ ++++++.+++++++++|++
T Consensus 254 -v~PDi~~~~K~lg~~G~pigav~~~~~~-~~~~~--~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~ 329 (412)
T TIGR02407 254 -IEPDIVCLSKSISGYGLPLALTLIKPEL-DVWKP--GEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQE 329 (412)
T ss_pred -CCCCEEEechhccCCccceeEEEEchhh-hccCC--CccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 99999999999999 8999999999987 66643 25779999999999999999996 7888999999999999999
Q ss_pred hhhhc
Q psy6205 219 PKKEN 223 (224)
Q Consensus 219 ~l~~l 223 (224)
+|+++
T Consensus 330 ~l~~l 334 (412)
T TIGR02407 330 RLDRI 334 (412)
T ss_pred HHHHH
Confidence 99853
No 54
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3e-32 Score=242.56 Aligned_cols=146 Identities=29% Similarity=0.484 Sum_probs=132.3
Q ss_pred HHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcC
Q psy6205 72 VKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQG 139 (224)
Q Consensus 72 ~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g 139 (224)
+.++++++++++. ..+++++||||+||+||++|+++++++|+++++++ |+|||||+|+ +|++++++
T Consensus 180 ~~~~~~l~~~~~~-~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~-~~~~~~~~ 257 (421)
T PRK06777 180 EEALSSVERLFKA-DIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGK-LFAMEYYD 257 (421)
T ss_pred HHHHHHHHHHHHh-ccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCc-hhhhhhcC
Confidence 3456777777753 12568899999999999999999999999999999 9999999997 88999998
Q ss_pred CCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Q psy6205 140 DDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTP 219 (224)
Q Consensus 140 ~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~ 219 (224)
++|||+|+||+++||+|+|++++++++++.+... .+.+||++||++|++++++|++++++++.+++++++++|+++
T Consensus 258 --~~pDiv~~sK~l~~G~pigav~~~~~i~~~~~~~--~~~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~ 333 (421)
T PRK06777 258 --VKPDLITMAKSLGGGMPISAVVGRAEVMDAPAPG--GLGGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEV 333 (421)
T ss_pred --CCCCEEeeehhhcCCCceEEEEEcHHHHhccCCC--CCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988654 567999999999999999999999999999999999999999
Q ss_pred hhhc
Q psy6205 220 KKEN 223 (224)
Q Consensus 220 l~~l 223 (224)
|+++
T Consensus 334 L~~l 337 (421)
T PRK06777 334 LEKA 337 (421)
T ss_pred HHHH
Confidence 9875
No 55
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=1.8e-32 Score=244.27 Aligned_cols=142 Identities=25% Similarity=0.401 Sum_probs=127.4
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
+++++++++. .++++||||+||+|+++|+++|+++|++.++++ |+||| |||. +|+++++| +
T Consensus 188 ~~~l~~~l~~---~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~-~ga~~~~g--v 260 (433)
T PRK00615 188 FQIFQTVMNS---LGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQ-GGAAAIYH--V 260 (433)
T ss_pred HHHHHHHHHh---cCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccH-hHHHHhcC--C
Confidence 4556666653 457899999999999999999999999999999 99999 9997 89999998 9
Q ss_pred CCchhcccccccCCcccccceecHHHHHhhhcCC-cccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 143 IPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETG-VEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 143 ~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~-~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
+|||+||||+||||+|+|++++++++++.+.+.+ ..+.+||++||++||+++++|+++++++++++++++|++|+++|+
T Consensus 261 ~PDi~~~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~ 340 (433)
T PRK00615 261 KPDITVYGKILGGGLPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIE 340 (433)
T ss_pred CCCeEEEcccccCCcceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999986432 235689999999999999999999999999999999999988887
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 341 ~~ 342 (433)
T PRK00615 341 EM 342 (433)
T ss_pred HH
Confidence 63
No 56
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=3.2e-32 Score=242.36 Aligned_cols=145 Identities=26% Similarity=0.449 Sum_probs=131.2
Q ss_pred HHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCC
Q psy6205 73 KYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGD 140 (224)
Q Consensus 73 ~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~ 140 (224)
.+++.++++++.. ..+++|||||+||+|+++|+.++|++|+++|+++ |+|||||+|+ +|++++++
T Consensus 181 ~~~~~l~~~~~~~-~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~-~~a~~~~~- 257 (421)
T PRK09792 181 DSLDAIERLFKSD-IEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGK-LFAMDHYA- 257 (421)
T ss_pred HHHHHHHHHHHhc-cCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCc-hhHHHhcC-
Confidence 4567777777531 1357899999999999999999999999999999 9999999997 79999998
Q ss_pred CCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Q psy6205 141 DIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPK 220 (224)
Q Consensus 141 ~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l 220 (224)
++|||+||||+|+||+|+|++++++++++.+... .+.+||++||++|++++++|++|+++++++++++++++|+++|
T Consensus 258 -~~pDi~t~gK~l~~G~pigav~~~~~i~~~~~~~--~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l 334 (421)
T PRK09792 258 -DKPDLMTMAKSLAGGMPLSGVVGNANIMDAPAPG--GLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTL 334 (421)
T ss_pred -CCCcEEEeehhhcCCCceEEEEEcHHHHhccCCC--CcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988643 5779999999999999999999999999999999999999999
Q ss_pred hhc
Q psy6205 221 KEN 223 (224)
Q Consensus 221 ~~l 223 (224)
+++
T Consensus 335 ~~l 337 (421)
T PRK09792 335 IDA 337 (421)
T ss_pred HHH
Confidence 764
No 57
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.98 E-value=4.6e-32 Score=241.67 Aligned_cols=144 Identities=28% Similarity=0.466 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCC
Q psy6205 74 YAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDD 141 (224)
Q Consensus 74 ~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~ 141 (224)
++++++++++......+++||||+|||||++|+++++++||++++++ |+|||||||+ +|++++++
T Consensus 181 ~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~-~~~~~~~~-- 257 (425)
T PRK09264 181 TLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGT-FFSFERAG-- 257 (425)
T ss_pred HHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccH-HHHHhhcC--
Confidence 45677777764211236899999999999999999999999999999 9999999997 89999998
Q ss_pred CCCchhcccccccC-CcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHH-HHHhhhhHHHHHHHHHHHHHHh
Q psy6205 142 IIPDIVTVGKPMGN-GHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVM-EVLETENLREHALDVGNQLHTP 219 (224)
Q Consensus 142 v~pDi~~~~K~l~~-G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l-~~~~~~~l~~~~~~~g~~l~~~ 219 (224)
+.|||+|+||+||+ |+|+|++++++++. .+... .+.+||++||++|++++++| ++++++++.+++++++++|+++
T Consensus 258 v~PDi~t~~K~l~~~G~pigav~~~~~i~-~~~~~--~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~ 334 (425)
T PRK09264 258 ITPDIVTLSKSISGYGLPMALVLIKPELD-VWKPG--EHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRER 334 (425)
T ss_pred CCCCEEEeccccCCCccceEEEEEchhhh-ccCCC--ccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 99999999999998 89999999999984 44322 56789999999999999999 6777889999999999999999
Q ss_pred hhhc
Q psy6205 220 KKEN 223 (224)
Q Consensus 220 l~~l 223 (224)
|+++
T Consensus 335 l~~l 338 (425)
T PRK09264 335 LEEI 338 (425)
T ss_pred HHHH
Confidence 8764
No 58
>PRK07046 aminotransferase; Validated
Probab=99.98 E-value=1.2e-32 Score=246.68 Aligned_cols=198 Identities=19% Similarity=0.193 Sum_probs=149.4
Q ss_pred EEEEeecCCCCCCccccchhhhccCCCcceeecCCCccccCCCCC--------CC-----C---CC---hhHHHHHHHHH
Q psy6205 18 GVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPCPDVYRGKYPA--------DK-----Y---PD---EDLGVKYAQDV 78 (224)
Q Consensus 18 gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~P~~yr~~~~~--------~~-----~---~~---~~~~~~~~~~l 78 (224)
++|.+.+..++++++..+.+++.. .+.+...+.+-.+||++... .. . +. +.....-.+++
T Consensus 129 ~~~~v~F~nSGtEA~e~AlrlAR~-~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~ 207 (453)
T PRK07046 129 GLPYWQVATTATDANRFVLRWARA-VTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFNDL 207 (453)
T ss_pred CCCEEEEECCHHHHHHHHHHHHHH-hhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCCCH
Confidence 367788888888888777776654 33444445555567765210 00 0 00 00000001234
Q ss_pred HHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 79 QDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 79 ~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
+.+.+.+ ..+++||||+||+||++|+++|+++||+.+|++ |+| | |+|. .+.++++| |+|||
T Consensus 208 ~~l~~~l--~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-f-r~g~-Gg~~~~~g--v~PDi 280 (453)
T PRK07046 208 AALEAAL--ADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-I-SSGP-GGYTRAHG--LEPDF 280 (453)
T ss_pred HHHHHHh--CCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-C-ccCC-cchhHHhC--CCccc
Confidence 4333333 247899999999999999999999999999999 999 6 5775 45667787 99999
Q ss_pred hcccccccCCcccccceecHHHHHhhhcC-------CcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Q psy6205 147 VTVGKPMGNGHPVAAVITTKEIAKSFQET-------GVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTP 219 (224)
Q Consensus 147 ~~~~K~l~~G~p~~av~~~~~i~~~~~~~-------~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~ 219 (224)
+|+||+||||+|+||+++++++++.+.+. ...+.+||+|||++|||++++|+++++++++++++++|++|+++
T Consensus 281 ~t~gK~lggG~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~ 360 (453)
T PRK07046 281 LVVGKPIAGGVPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAG 360 (453)
T ss_pred eeehhhhcCCCcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998631 12366899999999999999999999999999999999999999
Q ss_pred hhhc
Q psy6205 220 KKEN 223 (224)
Q Consensus 220 l~~l 223 (224)
|+++
T Consensus 361 L~~l 364 (453)
T PRK07046 361 LRAV 364 (453)
T ss_pred HHHH
Confidence 9863
No 59
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.97 E-value=1.5e-31 Score=239.25 Aligned_cols=142 Identities=28% Similarity=0.437 Sum_probs=123.0
Q ss_pred HHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcC
Q psy6205 72 VKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQG 139 (224)
Q Consensus 72 ~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g 139 (224)
..++++++++++ .+++++||||+|||||++|+++||++|++++|++ |||||||||+ +|+++++|
T Consensus 209 ~~~~~~~~~~i~---~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~-~~a~~~~g 284 (443)
T PRK08297 209 AEALAQARAAFE---RHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGT-AWAYQQLG 284 (443)
T ss_pred HHHHHHHHHHHH---hCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccch-HHHHHhcC
Confidence 345666766665 3678999999999999999999999999999999 9999999997 89999998
Q ss_pred CCCCCchhcccccccCCcccccceecHHHHHhhhc---CCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q psy6205 140 DDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQE---TGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQL 216 (224)
Q Consensus 140 ~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~---~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l 216 (224)
++|||+|+||++ |++++++++++++.+.. ....+++||++||++|++++++|+++++++++++++++|++|
T Consensus 285 --v~PDiv~~gK~l----~~~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l 358 (443)
T PRK08297 285 --VRPDIVAFGKKT----QVCGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEEDGLVENAARQGEYL 358 (443)
T ss_pred --CCCCEEEecccc----cccceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 999999999998 56777888776653311 112478999999999999999999999999999999999999
Q ss_pred HHhhhhc
Q psy6205 217 HTPKKEN 223 (224)
Q Consensus 217 ~~~l~~l 223 (224)
+++|+++
T Consensus 359 ~~~L~~l 365 (443)
T PRK08297 359 LARLEEL 365 (443)
T ss_pred HHHHHHH
Confidence 9999864
No 60
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.97 E-value=2.3e-31 Score=238.06 Aligned_cols=169 Identities=34% Similarity=0.569 Sum_probs=142.7
Q ss_pred ceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-----
Q psy6205 46 MSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH----- 120 (224)
Q Consensus 46 ~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----- 120 (224)
+..++++|++++.++.... .++...+++.++++++.. .+++++||||+||+|+.+|++.++++|+++++++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~-~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g 238 (443)
T PRK08360 163 DVHYIPYPDCYRCPFGKEP---GSCKMECVEYIKEKFEGE-VYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHG 238 (443)
T ss_pred CcEEEeCCccccccccCch---hhhHHHHHHHHHHHHHhc-cCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 4455666666665543211 334445666677766531 2457899999999999999999999999999999
Q ss_pred -------HHhCCccccccchhhhhcCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHH
Q psy6205 121 -------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVA 193 (224)
Q Consensus 121 -------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa 193 (224)
|+|||||+|+ +|++++++ ++|||+|+||++++|+|+|++++++++++.+... .+.+||++||++|+++
T Consensus 239 ~llI~DEv~~g~gr~G~-~~a~~~~~--~~pDiitlsK~l~~G~pigav~~~~~i~~~~~~~--~~~~T~~~~p~~~aaa 313 (443)
T PRK08360 239 ILLVVDEVQSGLGRTGK-WFAIEHFG--VEPDIITLGKPLGGGLPISATIGRAEIMDSLPPL--AHAFTLSGNPVASAAA 313 (443)
T ss_pred CEEEEeccccCCCcCcc-chhhhhcC--CCCCEEEecccccCCceeEEEEEcHHHHhhhcCC--CCCCCCCcCHHHHHHH
Confidence 9999999997 78999998 9999999999999999999999999999988643 5778999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 194 NAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 194 ~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++|++++++++.++++++|++|+++|+++
T Consensus 314 ~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l 343 (443)
T PRK08360 314 LAVIEEIEEKNLLKRAEKLGNYTKKRLEEM 343 (443)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999864
No 61
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.97 E-value=2.4e-31 Score=237.10 Aligned_cols=144 Identities=28% Similarity=0.478 Sum_probs=129.5
Q ss_pred HHHHHHHHHHHHccCCCCceEEEEccc-cCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCC
Q psy6205 74 YAQDVQDLIEAMGRNGKRPCAFFAESL-QSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGD 140 (224)
Q Consensus 74 ~~~~l~~~~~~~~~~~~~iaavi~Epv-~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~ 140 (224)
++++++++++. .++++||||+||+ |++||+++++++|+++++++ |+|||||||+ +|++++++
T Consensus 193 ~~~~l~~~l~~---~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~-~~~~~~~~- 267 (427)
T TIGR00508 193 AITPLAKLMEL---HSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGK-LFACEHAG- 267 (427)
T ss_pred HHHHHHHHHHh---cCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc-cchhhhcC-
Confidence 45666766653 4578999999997 99999999999999999999 9999999997 88999998
Q ss_pred CCCCchhcccccccCC-cccccceecHHHHHhhhcC---CcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q psy6205 141 DIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQET---GVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQL 216 (224)
Q Consensus 141 ~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~---~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l 216 (224)
+.|||+|+||+|+|| +|++++++++++++.+... ...+.+||++||++||+++++|++++++++.+++++++++|
T Consensus 268 -v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l 346 (427)
T TIGR00508 268 -VVPDILCVGKALTGGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGEWQKQVSAIENQL 346 (427)
T ss_pred -CCCCEEEechhhhcCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999999 5999999999999998743 12367899999999999999999999999999999999999
Q ss_pred HHhhhhc
Q psy6205 217 HTPKKEN 223 (224)
Q Consensus 217 ~~~l~~l 223 (224)
+++|+++
T Consensus 347 ~~~L~~l 353 (427)
T TIGR00508 347 KRELSPL 353 (427)
T ss_pred HHHHHHh
Confidence 9999875
No 62
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.97 E-value=3.2e-31 Score=236.17 Aligned_cols=147 Identities=29% Similarity=0.493 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHHHHccCCCCceEEEEcc-ccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhh
Q psy6205 71 GVKYAQDVQDLIEAMGRNGKRPCAFFAES-LQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQL 137 (224)
Q Consensus 71 ~~~~~~~l~~~~~~~~~~~~~iaavi~Ep-v~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~ 137 (224)
.+.++++++++++. +++++||||+|| +|+++|+++++++|+++++++ |+|||||||+ +|++++
T Consensus 182 ~~~~~~~l~~~l~~---~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~-~~a~~~ 257 (423)
T PRK05964 182 EQATLDALEALLEK---HAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGT-LFACEQ 257 (423)
T ss_pred HHHHHHHHHHHHHh---CCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcc-hhHHHh
Confidence 34567778877753 568999999999 799999999999999999999 9999999997 889999
Q ss_pred cCCCCCCchhcccccccCC-cccccceecHHHHHhhhcC----CcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHH
Q psy6205 138 QGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQET----GVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDV 212 (224)
Q Consensus 138 ~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~----~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~ 212 (224)
++ ++|||+++||+|+|| +|+|++++++++++.+... ...|.+||++||++|++++++|++++++++.++++++
T Consensus 258 ~~--v~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~ 335 (423)
T PRK05964 258 AG--VSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAAL 335 (423)
T ss_pred cC--CCCCeeeeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 98 999999999999999 7999999999999988532 1246789999999999999999999999999999999
Q ss_pred HHHHHHhhhhc
Q psy6205 213 GNQLHTPKKEN 223 (224)
Q Consensus 213 g~~l~~~l~~l 223 (224)
+++|+++|+++
T Consensus 336 g~~l~~~l~~l 346 (423)
T PRK05964 336 SAGLAEGLEPF 346 (423)
T ss_pred HHHHHHHHHhh
Confidence 99999999865
No 63
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.97 E-value=8.3e-31 Score=231.78 Aligned_cols=129 Identities=33% Similarity=0.583 Sum_probs=121.5
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~ 157 (224)
++++|||+||+++++|+++|+++|+++++++ |+|||||||+ +|+++++| ++|||+|+||++|||+
T Consensus 178 ~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~-~~a~~~~g--v~pDi~t~~K~lggG~ 254 (397)
T TIGR03246 178 DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGE-LYAYMHYG--VTPDILTSAKALGGGF 254 (397)
T ss_pred cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCcccc-chhhhhcC--CCCCEEEeehhhhCCc
Confidence 4799999999999999999999999999999 9999999997 78999998 9999999999999999
Q ss_pred ccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+|++++++++++.+... .+.+||++||++|++++++|++++++++.+++++++++|+++|+++
T Consensus 255 pigav~~~~~i~~~~~~~--~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l 318 (397)
T TIGR03246 255 PIGAMLTTTEIAAHLKVG--THGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKI 318 (397)
T ss_pred ceeEEEEcHHHHHhccCC--CcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988643 5678999999999999999999998999999999999999999875
No 64
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.97 E-value=5.6e-31 Score=229.93 Aligned_cols=113 Identities=32% Similarity=0.555 Sum_probs=106.1
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~ 157 (224)
+++||||+||+||++|+++++++|++++|++ ||||| |||+ +|++++++ ++|||+|+||+||||+
T Consensus 161 ~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~-~~a~~~~g--v~PDiv~~gK~lggG~ 236 (364)
T PRK04013 161 KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGK-FLAIEHYK--VEPDIVTMGKGIGNGV 236 (364)
T ss_pred CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCc-hhHHHhcC--CCCCEEEecccccCCc
Confidence 5899999999999999999999999999999 99999 9997 89999998 9999999999999999
Q ss_pred ccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHH
Q psy6205 158 PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDV 212 (224)
Q Consensus 158 p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~ 212 (224)
|+||++.++++. . ..|++||+|||++|||++++|++|+++++++|++++
T Consensus 237 P~~a~~~~~~~~----~--~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~ 285 (364)
T PRK04013 237 PVSLTLTNFDVE----R--GKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGEK 285 (364)
T ss_pred eeEEEEeccccc----C--CCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 999999998762 2 257899999999999999999999999999999886
No 65
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.97 E-value=3e-30 Score=230.33 Aligned_cols=142 Identities=27% Similarity=0.422 Sum_probs=122.3
Q ss_pred HHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcC
Q psy6205 72 VKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQG 139 (224)
Q Consensus 72 ~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g 139 (224)
..+++++++.++ .++++|||||+|||||++|+++||++|+++++++ |||||||||+ +|+++++|
T Consensus 202 ~~~l~~~~~~~~---~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~-~~a~~~~g 277 (431)
T TIGR03251 202 EEALRQARAAFA---ERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGT-AWAYQQLG 277 (431)
T ss_pred HHHHHHHHHHHH---hCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccch-HHHHHhcC
Confidence 355667776665 3678999999999999999999999999999999 9999999997 89999998
Q ss_pred CCCCCchhcccccccCCcccccceecHHHHHhhh---cCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q psy6205 140 DDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQ---ETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQL 216 (224)
Q Consensus 140 ~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~---~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l 216 (224)
++|||+|+||++ |+++++..+++.+... .....+.+||+|||++|++++++|++++++++.++++++|++|
T Consensus 278 --v~PDi~~~gK~~----~~~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l 351 (431)
T TIGR03251 278 --VQPDIVAFGKKT----QVCGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEERLVDNARVQGAHL 351 (431)
T ss_pred --CCCCEEEecccC----ccceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 999999999997 6777788776544321 1112467999999999999999999999999999999999999
Q ss_pred HHhhhhc
Q psy6205 217 HTPKKEN 223 (224)
Q Consensus 217 ~~~l~~l 223 (224)
+++|+++
T Consensus 352 ~~~L~~l 358 (431)
T TIGR03251 352 LARLHEL 358 (431)
T ss_pred HHHHHHH
Confidence 9999864
No 66
>PLN00144 acetylornithine transaminase
Probab=99.96 E-value=1.9e-29 Score=222.02 Aligned_cols=139 Identities=28% Similarity=0.530 Sum_probs=126.0
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
++.+++.++ .++++|||+||+|+.+|+++++++|+++++++ |+|||||+|+ +|++++++ +
T Consensus 156 ~~~l~~~~~-----~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~-~~~~~~~~--~ 227 (382)
T PLN00144 156 LEAARKLIQ-----KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGY-LWAHEAYG--V 227 (382)
T ss_pred HHHHHHhcC-----CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch-HhhhhhcC--C
Confidence 345554442 36899999999999999999999999999999 9999999997 88999998 9
Q ss_pred CCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh
Q psy6205 143 IPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 143 ~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~ 222 (224)
.|||+||||+|+||+|+|++++++++++.+... .+.+||++||++|++++++|++|+++++.+++++++++|++.|++
T Consensus 228 ~PDi~t~sK~l~~G~pig~v~~~~~~~~~~~~~--~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~ 305 (382)
T PLN00144 228 EPDIMTLAKPLAGGLPIGAVLVTEKVASAINPG--DHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRR 305 (382)
T ss_pred CCCEEEecccccCCcceEEEEEcHHHHhccCCC--CCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988643 577999999999999999999999999999999999999998875
Q ss_pred c
Q psy6205 223 N 223 (224)
Q Consensus 223 l 223 (224)
+
T Consensus 306 ~ 306 (382)
T PLN00144 306 K 306 (382)
T ss_pred H
Confidence 3
No 67
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.96 E-value=2.8e-29 Score=222.58 Aligned_cols=130 Identities=28% Similarity=0.483 Sum_probs=122.0
Q ss_pred CCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC
Q psy6205 89 GKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG 156 (224)
Q Consensus 89 ~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G 156 (224)
+++++|||+||+|+++|+++++++|+++++++ |+|||||+|+ +|++++++ ++|||+||||+++||
T Consensus 185 ~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~a~~~~~--~~pdi~t~~K~l~~G 261 (408)
T PRK04612 185 GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGT-LFAHWQEQ--VTPDIVTLAKALGGG 261 (408)
T ss_pred CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc-hhhhhhcC--CCCCEEEEcchhcCC
Confidence 46899999999999999999999999999999 9999999997 88888887 999999999999999
Q ss_pred cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 157 HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 157 ~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|+|++++++++++.+... .+.+||++||++|++++++|++++++++.++++++|++|+++|+++
T Consensus 262 ~piga~~~~~~~~~~~~~~--~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l 326 (408)
T PRK04612 262 FPIGAMLAGPKVAETMQFG--AHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEAL 326 (408)
T ss_pred CceEEEEECHHHHhhhcCC--CcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988653 5678999999999999999999999999999999999999999875
No 68
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.96 E-value=1e-28 Score=219.01 Aligned_cols=129 Identities=30% Similarity=0.525 Sum_probs=121.3
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~ 157 (224)
++++|||+||+++++|+++|+++|+++++++ |+|||||+|+ +|++++++ +.||++|+||++|||+
T Consensus 182 ~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~-~~~~~~~~--v~pDi~t~sK~l~gG~ 258 (406)
T PRK12381 182 DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGE-LYAYMHYG--VTPDVLTTAKALGGGF 258 (406)
T ss_pred CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcc-hhhhHhhC--CCCCEEEehhhhhCCC
Confidence 4799999999999999999999999999999 9999999997 78889998 9999999999999999
Q ss_pred ccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+|++++++++++.+... .+.+||++||++|++++++|++++++++.+++++++++|+++|+++
T Consensus 259 ~ig~~~~~~~~~~~~~~~--~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l 322 (406)
T PRK12381 259 PIGAMLTTEKCASVMTVG--THGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTI 322 (406)
T ss_pred ceEEEEEcHHHHhhcCCC--CCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988643 5678999999999999999999998899999999999999999875
No 69
>KOG1405|consensus
Probab=99.95 E-value=1.4e-28 Score=206.58 Aligned_cols=205 Identities=24% Similarity=0.353 Sum_probs=154.1
Q ss_pred eeccCCceeEEEEeecCCCCCCccccchhhhccCC----Ccc---------eee--cCCCcc-------ccCCCCCCCCC
Q psy6205 9 DVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPP----VRM---------STE--APCPDV-------YRGKYPADKYP 66 (224)
Q Consensus 9 ~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~----~~~---------~~~--vp~P~~-------yr~~~~~~~~~ 66 (224)
.-||.+-+..-|+.++..+..|.++.-.-+.|+.. +.+ +|. +|.-+| |+.|..++...
T Consensus 167 k~rg~~~~s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~SKpIHKldiPaFdWPiA~fP~ykYPLdenv~~ 246 (484)
T KOG1405|consen 167 KERGQAGFSAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTTHSKPIHKLDIPAFDWPIAPFPRYKYPLDENVAE 246 (484)
T ss_pred hcCCCCCCCHHHHHHHHhcCCCCCCceeeeeeccccccccccccccccCccccccCCCCCCCCCCCCccccCChhhhhhh
Confidence 56787788888888887777776532111111111 111 121 122222 33333322211
Q ss_pred ChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchh
Q psy6205 67 DEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWA 134 (224)
Q Consensus 67 ~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~ 134 (224)
.....+.|++++|++|....+....|||+||||||++||+...+++|++.||++ ||||-|-||+ +|+
T Consensus 247 N~ked~~Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk-~Wa 325 (484)
T KOG1405|consen 247 NKKEDQGCLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGK-FWA 325 (484)
T ss_pred hhhhhhhHHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCc-eee
Confidence 234567899999999998765667899999999999999999999999999999 9999999997 999
Q ss_pred hhhcCCCCCCchhccccccc-CCcccccceecHHHHHhhhcC-CcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHH
Q psy6205 135 FQLQGDDIIPDIVTVGKPMG-NGHPVAAVITTKEIAKSFQET-GVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDV 212 (224)
Q Consensus 135 ~~~~g~~v~pDi~~~~K~l~-~G~p~~av~~~~~i~~~~~~~-~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~ 212 (224)
+|||+++-.||+|||||-+- ||| .-. +.|+.. ...+++||.|+|.-+-...+++++|++++|.++++..
T Consensus 326 Hehw~l~~PpD~vTFSKK~q~gGf-----fh~----~~frpn~pYrifNTWmGdP~k~lll~~vv~~I~~~~Ll~n~~~v 396 (484)
T KOG1405|consen 326 HEHWNLDSPPDVVTFSKKFQTGGF-----FHD----EEFRPNEPYRIFNTWMGDPSKNLLLEEVVQEIKREDLLNNVAHV 396 (484)
T ss_pred ehhcCCCCCccceehhhhhhcCcc-----ccC----cccCCCchHHHhhhhcCChHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 99999667899999999984 675 223 223332 3456799999999999999999999999999999999
Q ss_pred HHHHHHhhhhc
Q psy6205 213 GNQLHTPKKEN 223 (224)
Q Consensus 213 g~~l~~~l~~l 223 (224)
|+.|.++|.+|
T Consensus 397 G~~l~~gL~~L 407 (484)
T KOG1405|consen 397 GKALLKGLLEL 407 (484)
T ss_pred HHHHHHHHHHH
Confidence 99999999865
No 70
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.95 E-value=7.4e-28 Score=214.76 Aligned_cols=142 Identities=28% Similarity=0.396 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
++++++.++. .++++++||+||+||++|+++++++|+++++++ |+||| |+|. +|++++++ +
T Consensus 184 ~~~l~~~i~~---~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~-r~g~-~~~~~~~~--~ 256 (426)
T PRK00062 184 LEAVEELFEE---YGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGF-RVAL-GGAQGYYG--V 256 (426)
T ss_pred HHHHHHHHHh---CCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcc-ccCC-ccHHHHhC--C
Confidence 5666666653 467999999999999999999999999999999 99999 9997 78899998 9
Q ss_pred CCchhcccccccCCcccccceecHHHHHhhhcC-CcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 143 IPDIVTVGKPMGNGHPVAAVITTKEIAKSFQET-GVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 143 ~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~-~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
.|||+++||++++|+|+|++++++++++.+... ...+++||++||++|++++++|++++++++++++++++++|+++|+
T Consensus 257 ~pDi~~~gK~l~~G~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~ 336 (426)
T PRK00062 257 TPDLTTLGKIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLK 336 (426)
T ss_pred CcchHhhhhHhhCCCcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999998643 2245689999999999999999999988999999999999999997
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 337 ~~ 338 (426)
T PRK00062 337 EA 338 (426)
T ss_pred HH
Confidence 53
No 71
>PLN02624 ornithine-delta-aminotransferase
Probab=99.95 E-value=1.7e-27 Score=214.89 Aligned_cols=141 Identities=33% Similarity=0.617 Sum_probs=127.3
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
++.++++++ .++++++|||+||+|+++|++.|+++|+++++++ |++||||+|+ +|++++++ +
T Consensus 211 ~~~l~~~l~---~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~-~~a~~~~~--i 284 (474)
T PLN02624 211 LDALEKIFE---EDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGK-MLACDWEE--V 284 (474)
T ss_pred HHHHHHHHH---hCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcc-hhhHHhcC--C
Confidence 355666664 2567899999999999999999999999999999 9999999997 88988888 9
Q ss_pred CCchhcccccccCC-cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 143 IPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 143 ~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
.|||+++||++|+| +|+|++++++++++.+... .+++||++||++|++++++|++++++++.+++++++++|+++|+
T Consensus 285 ~pDiv~lsK~lggG~~pigav~~~~~i~~~~~~~--~~~~T~~g~pl~~aaa~aaLe~l~~~~l~~~~~~~~~~l~~~L~ 362 (474)
T PLN02624 285 RPDVVILGKALGGGVIPVSAVLADKDVMLCIKPG--EHGSTFGGNPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQ 362 (474)
T ss_pred CCCEEEecccccCCCCcceeeeecHHHHhHhccC--CcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHH
Confidence 99999999999998 7999999999999887543 56789999999999999999999988999999999999999997
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 363 ~l 364 (474)
T PLN02624 363 KI 364 (474)
T ss_pred HH
Confidence 64
No 72
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.95 E-value=4e-27 Score=209.76 Aligned_cols=141 Identities=26% Similarity=0.408 Sum_probs=125.5
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
++++++++.. ++++++|||+||+|+++|+++++++|+++|+++ |+||| |+|. +|++++++ +
T Consensus 182 ~~~l~~~i~~---~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~-r~g~-~~~~~~~~--~ 254 (423)
T TIGR00713 182 LEALEEVFEE---YGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGF-RVAL-GGAQEYFG--V 254 (423)
T ss_pred HHHHHHHHHH---cCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccc-ccCc-chhHHHhC--C
Confidence 4566666652 457899999999999999999999999999999 99999 9996 78888998 9
Q ss_pred CCchhcccccccCCcccccceecHHHHHhhhcCC-cccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 143 IPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETG-VEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 143 ~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~-~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
.|||+||||++++|+|+|++++++++++.+.... ..+.+||++||++|++++++|++++++++.+++++++++++++|+
T Consensus 255 ~pDi~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~ 334 (423)
T TIGR00713 255 EPDLTTLGKIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLS 334 (423)
T ss_pred CcchhhhhhhhcCCCceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999986432 246689999999999999999999988899999999999999886
Q ss_pred h
Q psy6205 222 E 222 (224)
Q Consensus 222 ~ 222 (224)
+
T Consensus 335 ~ 335 (423)
T TIGR00713 335 E 335 (423)
T ss_pred H
Confidence 4
No 73
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.95 E-value=3.3e-27 Score=210.77 Aligned_cols=138 Identities=25% Similarity=0.337 Sum_probs=118.3
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
+++++++++. +++++||||+||++|+ .|+++|+++++++ |+|||++++ +++.+++| +
T Consensus 174 ~~~l~~~l~~---~~~~~aavi~Epv~g~----~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~--~g~~~~~g--v 242 (431)
T PRK06209 174 IASLEALFED---HPGRIACVILEPATAD----EPQDGFLHEVRRLCHENGALFILDEMITGFRWHM--RGAQKLYG--I 242 (431)
T ss_pred HHHHHHHHHh---CCCCEEEEEEccccCC----CCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc--chhhHHhC--C
Confidence 4666666653 5678999999999987 8889999999999 899998865 34555788 9
Q ss_pred CCchhcccccccCCcccccceecHHHHHh--hhc----CCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q psy6205 143 IPDIVTVGKPMGNGHPVAAVITTKEIAKS--FQE----TGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQL 216 (224)
Q Consensus 143 ~pDi~~~~K~l~~G~p~~av~~~~~i~~~--~~~----~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l 216 (224)
.|||+|+||+||||+|+|++++++++++. +.. ....|.+||++||++||+++++|++|+++++.++++++|++|
T Consensus 243 ~PDi~t~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l 322 (431)
T PRK06209 243 VPDLSCFGKALGNGFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKL 322 (431)
T ss_pred CcceeeehhhhcCCcccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 99999999999999999999999999997 311 112367899999999999999999999999999999999999
Q ss_pred HHhhhhc
Q psy6205 217 HTPKKEN 223 (224)
Q Consensus 217 ~~~l~~l 223 (224)
+++|+++
T Consensus 323 ~~~L~~~ 329 (431)
T PRK06209 323 AAGVNEA 329 (431)
T ss_pred HHHHHHH
Confidence 9999763
No 74
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=1.3e-26 Score=204.72 Aligned_cols=129 Identities=37% Similarity=0.628 Sum_probs=120.8
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~ 157 (224)
+++++||+||+|+.+|++.|+++|+++|+++ +++||||+|+ +|++++++ +.||++||||++++|+
T Consensus 182 ~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~-~~~~~~~~--~~pDi~t~sK~l~~G~ 258 (398)
T PRK03244 182 DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGA-WFAHQHDG--VTPDVVTLAKGLGGGL 258 (398)
T ss_pred CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccch-HHhhhhhC--CCCCEEEEchhhhCCc
Confidence 4799999999999999999999999999999 9999999997 78888887 9999999999999999
Q ss_pred ccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+|++++++++++.+... .+.+||++||++|++++++|++++++++.+++++++++|++.|+++
T Consensus 259 ~ig~~~~~~~~~~~~~~~--~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 322 (398)
T PRK03244 259 PIGACLAFGPAADLLTPG--LHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEAL 322 (398)
T ss_pred ccEEEEEcHHHHhhccCC--CCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhc
Confidence 999999999999988643 5678999999999999999999998899999999999999999875
No 75
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.94 E-value=5e-26 Score=201.44 Aligned_cols=141 Identities=35% Similarity=0.649 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
+++|+++++. .++++++||+||+++++|++.|+++|+++++++ |+|||||+|+ +|++++++ +
T Consensus 173 ~~~le~~l~~---~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~-~~~~~~~~--~ 246 (401)
T TIGR01885 173 LEALEEALED---HGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGK-LLCVDHEN--V 246 (401)
T ss_pred HHHHHHHHHh---cCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch-hhHHhhcC--C
Confidence 4667776653 457899999999999999999999999999999 8999999997 77888887 9
Q ss_pred CCchhcccccccCC-cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 143 IPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 143 ~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
.||++|+||++++| +|+|++++++++++.+... .+.+||++||++|++++++|++++++++.+++++++++|+++|+
T Consensus 247 ~~di~~~gK~l~~g~~~ig~v~~~~~i~~~~~~~--~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~~L~ 324 (401)
T TIGR01885 247 KPDIVLLGKALSGGVYPVSAVLADDDVMLTIKPG--EHGSTYGGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLK 324 (401)
T ss_pred CCCEEEeeccccCCCCCcEEEEEcHHHHhhccCC--CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 99999999999988 7999999999999988643 45689999999999999999999988999999999999999998
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 325 ~l 326 (401)
T TIGR01885 325 KL 326 (401)
T ss_pred hc
Confidence 76
No 76
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.93 E-value=1.7e-25 Score=199.50 Aligned_cols=145 Identities=28% Similarity=0.448 Sum_probs=130.5
Q ss_pred HHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCC
Q psy6205 73 KYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGD 140 (224)
Q Consensus 73 ~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~ 140 (224)
.++++|+++++.. .+++++||||+||+|+++|+++++++|+++++++ |++||||+|+ ++++++++
T Consensus 182 ~~~~~l~~~l~~~-~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~-~~~~~~~~- 258 (425)
T PRK08088 182 DAIASIERIFKND-AAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGT-LFAMEQMG- 258 (425)
T ss_pred HHHHHHHHHHHhc-cCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc-hhHHhhcC-
Confidence 4567777777531 2467899999999999999999999999999999 9999999997 78888888
Q ss_pred CCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhh
Q psy6205 141 DIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPK 220 (224)
Q Consensus 141 ~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l 220 (224)
+.|||.+|||++++|+|+|++++++++++.+... .+.+||++||+++++++++|+.+++++++++++++++++++.|
T Consensus 259 -~~pdi~s~sK~l~~G~rig~v~~~~~~~~~~~~~--~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l 335 (425)
T PRK08088 259 -VAADLTTFAKSIAGGFPLAGVTGRAEVMDAIAPG--GLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGL 335 (425)
T ss_pred -CCCCEEEEeccccCCCcceeeEecHHHHhhcCCC--CCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988654 5678999999999999999999998899999999999999998
Q ss_pred hhc
Q psy6205 221 KEN 223 (224)
Q Consensus 221 ~~l 223 (224)
+++
T Consensus 336 ~~l 338 (425)
T PRK08088 336 LAI 338 (425)
T ss_pred HHH
Confidence 754
No 77
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.93 E-value=4.4e-25 Score=195.17 Aligned_cols=129 Identities=35% Similarity=0.660 Sum_probs=119.7
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG- 156 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G- 156 (224)
+++++||+||+++.+|.+.++++|+++++++ +++||||+|+ +|++++++ +.||++|+||++|+|
T Consensus 185 ~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~-~~~~~~~~--~~pdi~~~sK~lg~gg 261 (396)
T PRK04073 185 PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGK-LFACDWDN--VTPDMYILGKALGGGV 261 (396)
T ss_pred cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcH-HHHhhhcC--CCCCEEEecccccCCC
Confidence 4689999999999999999999999999999 9999999997 78888887 999999999999987
Q ss_pred cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 157 HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 157 ~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|+|++++++++++.+... .+.+||++||++|++++++|++++++++.+++++++++|.++|+++
T Consensus 262 ~~ig~~~~~~~i~~~~~~~--~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l 326 (396)
T PRK04073 262 FPISCVAANRDILGVFTPG--SHGSTFGGNPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEI 326 (396)
T ss_pred CcceEEEEcHHHHhhhcCC--CCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 8999999999999988643 5678999999999999999999988899999999999999999875
No 78
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.93 E-value=1.9e-25 Score=196.89 Aligned_cols=129 Identities=33% Similarity=0.551 Sum_probs=120.2
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~ 157 (224)
+++++||+||+++.+|+++++++|+++|+++ |++||||+|+ +|++++++ +.||++++||++++|+
T Consensus 174 ~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~-~~~~~~~~--~~pdi~t~sK~l~~G~ 250 (389)
T PRK01278 174 PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGK-LFAHEWAG--VTPDIMAVAKGIGGGF 250 (389)
T ss_pred CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc-ceeecccC--CCCCEEEEehhccCCc
Confidence 3799999999999999999999999999999 9999999997 78888888 9999999999999999
Q ss_pred ccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+|++++++++++.+... .+.+||++||+++++++++|++++++++.+++++++++++++|+++
T Consensus 251 ~ig~~~~~~~~~~~~~~~--~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l 314 (389)
T PRK01278 251 PLGACLATEEAAKGMTPG--THGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGL 314 (389)
T ss_pred ceEEEEEcHHHHhccCCC--CCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988643 5778999999999999999999988899999999999999999864
No 79
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.92 E-value=1.4e-24 Score=190.55 Aligned_cols=128 Identities=37% Similarity=0.580 Sum_probs=118.7
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~ 157 (224)
+++++||+||+++++|+++++++|+++++++ |++||||+|+ ++++++++ +.||++|+||++++|+
T Consensus 166 ~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~-~~~~~~~~--~~~di~t~sK~l~~G~ 242 (377)
T PRK02936 166 EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGT-LFAYEQFG--LDPDIVTVAKGLGNGI 242 (377)
T ss_pred CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCch-hhHHHhhC--CCCcEEEEcccccCCC
Confidence 4689999999999999999999999999999 9999999997 77888887 9999999999999999
Q ss_pred ccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh
Q psy6205 158 PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 158 p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~ 222 (224)
|+|++++++++++.+... .+.+||++||+++++++++|+.++++++++++++++++++++|++
T Consensus 243 ~ig~v~~~~~~~~~~~~~--~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~ 305 (377)
T PRK02936 243 PVGAMIGKKELGTAFGPG--SHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQE 305 (377)
T ss_pred ccEEEEEcHHHHhhccCC--CCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 999999999999988643 466899999999999999999998788999999999999999976
No 80
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.91 E-value=2.5e-24 Score=189.00 Aligned_cols=129 Identities=32% Similarity=0.521 Sum_probs=119.4
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~ 157 (224)
+++++|++||+++++|+++++++|++.++++ +++||||+|+ +|.++.++ +.|||+||||+|++|+
T Consensus 164 ~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~-~~~~~~~~--~~pdi~t~sK~l~~G~ 240 (375)
T PRK04260 164 KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGK-LYAFEHYG--IEPDIFTLAKGLANGV 240 (375)
T ss_pred CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc-hhhhHhhC--CCCCEEEecccccCCc
Confidence 4689999999999999999999999999999 8999999997 77888888 9999999999999999
Q ss_pred ccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+|++++++++++.+... .+.+||++||++|+++.++|++++++++.+++++.+++++++|+++
T Consensus 241 ~ig~~~~~~~~~~~~~~~--~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (375)
T PRK04260 241 PVGAMLAKSSLGGAFGYG--SHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKA 304 (375)
T ss_pred ceEEEEEcHHHHhhcCCC--CCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988643 4678999999999999999999998899999999999999998763
No 81
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.91 E-value=6.1e-24 Score=188.29 Aligned_cols=129 Identities=35% Similarity=0.614 Sum_probs=119.6
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~ 157 (224)
+++++||+||+++++|+++++++|+++++++ |++||||+|+ ++++++++ +.|||++|||++++|+
T Consensus 183 ~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~-~~~~~~~~--~~pdi~s~sK~l~~G~ 259 (403)
T PRK05093 183 DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGD-LFAYMHYG--VTPDILTSAKALGGGF 259 (403)
T ss_pred CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc-chhhhhcC--CCCCEEEecccccCCc
Confidence 4699999999999999999999999999999 9999999997 77888887 9999999999999999
Q ss_pred ccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+|++++++++++.+... .+.+||++||+++++++++|++++++++.+++++++++|.++|+++
T Consensus 260 rig~vv~~~~i~~~l~~~--~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~ 323 (403)
T PRK05093 260 PIGAMLTTAEIASHFKVG--THGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKI 323 (403)
T ss_pred ceEEEEEcHHHHhhcCCC--CCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988643 4668999999999999999999988899999999999999999875
No 82
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.90 E-value=5.5e-23 Score=181.86 Aligned_cols=129 Identities=35% Similarity=0.609 Sum_probs=118.8
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG- 156 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G- 156 (224)
+++++||+||+++.+|++.++++|+++++++ |++||||+|+ +|+.+++| +.||++++||+++||
T Consensus 186 ~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~-~~~~~~~g--~~~D~~~~~K~l~gg~ 262 (401)
T PRK00854 186 PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGK-LLAEEHEG--IEADVTLIGKALSGGF 262 (401)
T ss_pred CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCch-HhHHhhcC--CCCCEEEecccccCCc
Confidence 3689999999999999999999999999999 9999999997 77888888 999999999999999
Q ss_pred cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 157 HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 157 ~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|+|++++++++++.+... .+.+||++||+++++++++|+.++++++.+++++++++|.+.|+++
T Consensus 263 ~~ig~v~~~~~~~~~l~~~--~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~ 327 (401)
T PRK00854 263 YPVSAVLSNSEVLGVLKPG--QHGSTFGGNPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSI 327 (401)
T ss_pred cCeEEEEEcHHHHhcccCC--CCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhh
Confidence 5999999999999988643 4668999999999999999999988889999999999999999875
No 83
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.89 E-value=6.4e-23 Score=181.24 Aligned_cols=139 Identities=36% Similarity=0.654 Sum_probs=123.1
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
+++|++.++ .+++++|++||+++++|++.++++|+++++++ |++||||+|+ +++.++++ +
T Consensus 167 ~~~le~~l~-----~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~-~~~~~~~~--~ 238 (400)
T PTZ00125 167 VEALEKLLQ-----DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGK-LLAHDHEG--V 238 (400)
T ss_pred HHHHHHHhC-----CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch-hhHHHhcC--C
Confidence 445555442 35799999999999999999999999999999 8999999997 77888887 9
Q ss_pred CCchhcccccccCCc-ccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 143 IPDIVTVGKPMGNGH-PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 143 ~pDi~~~~K~l~~G~-p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
.||++++||++++|+ |+|++++++++++.+... .+.+||++||+++++++++|++++++++.+++++++++++++|+
T Consensus 239 ~pd~~~~sK~l~~g~~~ig~v~~~~~~~~~~~~~--~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~ 316 (400)
T PTZ00125 239 KPDIVLLGKALSGGLYPISAVLANDDVMLVIKPG--EHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLK 316 (400)
T ss_pred CCCEEEEcccccCCCcCcEEEEEcHHHHhhccCC--CCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 999999999999985 999999999999988643 45689999999999999999999888999999999999999997
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 317 ~l 318 (400)
T PTZ00125 317 EL 318 (400)
T ss_pred HH
Confidence 64
No 84
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.89 E-value=1.3e-22 Score=179.58 Aligned_cols=144 Identities=40% Similarity=0.660 Sum_probs=125.9
Q ss_pred HHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCC
Q psy6205 74 YAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDD 141 (224)
Q Consensus 74 ~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~ 141 (224)
.+++|++.++ .+++++++||+||+++++|++.++++|+++++++ +++||||+|. ++++++++
T Consensus 177 d~~~l~~~l~---~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~-~~~~~~~~-- 250 (413)
T cd00610 177 DLEALEEALE---EHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGK-MFAFEHFG-- 250 (413)
T ss_pred HHHHHHHHHh---cCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc-hhhHhhcC--
Confidence 3455555543 3557899999999999999999999999999998 8999999997 77888888
Q ss_pred CCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 142 IIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 142 v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
+.||++++||++++|+|+|++++++++++.+......+.+||++||+++++++++|++++++++.+++++++++|+++|+
T Consensus 251 ~~~d~~t~sK~l~~g~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~ 330 (413)
T cd00610 251 VEPDIVTLGKGLGGGLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLR 330 (413)
T ss_pred CCCCeEEEcccccCccccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999862122356689999999999999999999888999999999999999998
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 331 ~~ 332 (413)
T cd00610 331 EL 332 (413)
T ss_pred HH
Confidence 64
No 85
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.88 E-value=1.9e-22 Score=177.82 Aligned_cols=129 Identities=38% Similarity=0.646 Sum_probs=118.8
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~ 157 (224)
+++++|++||+++.+|+.+++++|+++++++ +++||||+|+ ++++++++ +.||+++|||++++|+
T Consensus 181 ~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~-~~~~~~~~--~~pdi~t~sK~~~~G~ 257 (396)
T PRK02627 181 DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGK-LFAYQHYG--IEPDIMTLAKGLGGGV 257 (396)
T ss_pred CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCc-eeeehhcC--CCCCEEEEcchhhCCc
Confidence 5799999999999999999999999999999 9999999997 78888887 9999999999999999
Q ss_pred ccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+|++++++++++.+... .+.+||++||++++++.++|+.++++++.+++++++++++++|+++
T Consensus 258 rig~~~~~~~~~~~~~~~--~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 321 (396)
T PRK02627 258 PIGAVLAKEKVADVFTPG--DHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLREL 321 (396)
T ss_pred ccEEEEEcHHHHhccCCC--CCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988643 4678999999999999999999988899999999999999998764
No 86
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.74 E-value=2.4e-17 Score=144.45 Aligned_cols=128 Identities=36% Similarity=0.638 Sum_probs=114.4
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCcc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHP 158 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p 158 (224)
++.+|++||.++.+|.++++.++++++.++ +++|||++|+ ++.++.++ +.||++|+||++++|+|
T Consensus 170 ~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~-~~~~~~~~--~~~d~~t~sK~~~~G~r 246 (379)
T TIGR00707 170 ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGK-FFAYEHYG--IEPDIITLAKGLGGGVP 246 (379)
T ss_pred CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch-hhhHHhcC--CCCCEEEEcccccCCcc
Confidence 578999999999999988899999999888 8899999996 66667777 89999999999998999
Q ss_pred cccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 159 VAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 159 ~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|++++++++++.+... .+..+|++||++++++.++|+.++++++.++++++.++++++|+++
T Consensus 247 iG~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~ 309 (379)
T TIGR00707 247 IGATLAKEEVAEAFTPG--DHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEEL 309 (379)
T ss_pred cEEEEEcHHHHhhhcCC--CCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988653 4567899999999999999999987889999999999999998764
No 87
>PLN02822 serine palmitoyltransferase
Probab=99.62 E-value=3.2e-15 Score=135.44 Aligned_cols=121 Identities=18% Similarity=0.220 Sum_probs=101.7
Q ss_pred eEEEEccccCCCCcccCCHHHHHHHHHH--------HHh--CCccccccchhhhhcCCCC---CCchhc--cccccc--C
Q psy6205 93 CAFFAESLQSCGGQIIPPANYLREVYKH--------VQV--GFGRVGTHWWAFQLQGDDI---IPDIVT--VGKPMG--N 155 (224)
Q Consensus 93 aavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~t--G~GrtG~~~~~~~~~g~~v---~pDi~~--~~K~l~--~ 155 (224)
++||+|+++++.|.+.+.++..+.+++. +++ .+||+|+ +.+++++ + .|||++ |||++| |
T Consensus 247 ~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~--G~~e~~~--v~~~~~dii~~s~sKalg~~G 322 (481)
T PLN02822 247 RYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGR--GLSEHFG--VPIEKIDIITAAMGHALATEG 322 (481)
T ss_pred EEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCC--ChHHHcC--CCCCCCeEEEecchhhhhhCC
Confidence 8999999999999999966666666665 444 4799997 4789998 7 799988 889998 7
Q ss_pred CcccccceecHHHHHhhhcCCcccccCCCCc--HHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhhhhc
Q psy6205 156 GHPVAAVITTKEIAKSFQETGVEYFNTYGGN--PVSCAVANAVMEVLET-ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 156 G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~--p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+ +++++++++.+... .+.+||+++ |..++|++++|+.+++ +++.+++++++++|+++|+++
T Consensus 323 G~----i~g~~~ii~~~~~~--~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~ 387 (481)
T PLN02822 323 GF----CTGSARVVDHQRLS--SSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDI 387 (481)
T ss_pred eE----EEcCHHHHHHHHhc--CCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc
Confidence 66 78999999988754 456788877 9999999999999976 789999999999999999874
No 88
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.58 E-value=1.8e-14 Score=127.50 Aligned_cols=125 Identities=15% Similarity=0.177 Sum_probs=97.0
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHh--CCccccccchhhhhcCCCCCC----chhcccccccCC
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQV--GFGRVGTHWWAFQLQGDDIIP----DIVTVGKPMGNG 156 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~t--G~GrtG~~~~~~~~~g~~v~p----Di~~~~K~l~~G 156 (224)
+...|++||+++++|.+++.+++.+.+++. +++ ++|++|+ |+++++| +.| ||+++|++-+.|
T Consensus 138 ~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~--g~~~~~g--~~p~~~~Div~~slsk~~g 213 (392)
T PLN03227 138 QRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGTLGKSGR--GSLEHAG--LKPMVHAEIVTFSLENAFG 213 (392)
T ss_pred CcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccccCCCCC--cHHHHcC--CCCCCCceEEEeechhhhh
Confidence 567899999999999999977666666665 555 4677786 6899998 999 999987332223
Q ss_pred ccc-ccceecHHHHHhhhcCCcccccCCCCc--HHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHHhhhh
Q psy6205 157 HPV-AAVITTKEIAKSFQETGVEYFNTYGGN--PVSCAVANAVMEV-LETENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 157 ~p~-~av~~~~~i~~~~~~~~~~~~~T~~~~--p~~~aaa~a~l~~-~~~~~l~~~~~~~g~~l~~~l~~ 222 (224)
|+ |++++++++++.+... .+.+||+++ |..|++++++++. ++++++.+++++++++|+++|++
T Consensus 214 -~~gg~v~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~ 280 (392)
T PLN03227 214 -SVGGMTVGSEEVVDHQRLS--GSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTN 280 (392)
T ss_pred -ccCcEEecCHHHHHHHHHh--CcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh
Confidence 44 4567899998877543 455788887 8888888877755 56788999999999999999975
No 89
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.54 E-value=1.1e-13 Score=121.33 Aligned_cols=141 Identities=23% Similarity=0.315 Sum_probs=116.7
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH---------HHhC-CccccccchhhhhcCCCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH---------VQVG-FGRVGTHWWAFQLQGDDIIP 144 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~---------v~tG-~GrtG~~~~~~~~~g~~v~p 144 (224)
+++||++++.....+.+-..|++|.|++|.|++.|.+++.+..+++ ..+| +|.+|+ +.++++| +.|
T Consensus 155 ~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~Gr--G~~e~~g--~~~ 230 (388)
T COG0156 155 LDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGR--GLAEHFG--LEP 230 (388)
T ss_pred HHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccCCCCc--cHHHHhC--CCC
Confidence 4677777765311111567899999999999999999999999999 5555 688887 5788998 876
Q ss_pred c---h--hccccccc--CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHH
Q psy6205 145 D---I--VTVGKPMG--NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQL 216 (224)
Q Consensus 145 D---i--~~~~K~l~--~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l 216 (224)
+ | .||||++| ||+ +++++.+.|.+....+.+.+|.+.+|..++++.++|++++ .++..++++++..++
T Consensus 231 ~~vdi~~gTlsKAlGs~Gg~----v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~ 306 (388)
T COG0156 231 EEVDIIVGTLGKALGSSGGY----IAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFF 306 (388)
T ss_pred ccceEEEEEchhhhcccCce----eeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 5 3 38999999 357 9999999999998878899999999999999999999997 468999999999999
Q ss_pred HHhhhhc
Q psy6205 217 HTPKKEN 223 (224)
Q Consensus 217 ~~~l~~l 223 (224)
++.++..
T Consensus 307 ~~~~~~~ 313 (388)
T COG0156 307 RSLLKAL 313 (388)
T ss_pred HHHHHhc
Confidence 9766653
No 90
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.53 E-value=7.6e-14 Score=123.77 Aligned_cols=139 Identities=23% Similarity=0.303 Sum_probs=109.0
Q ss_pred HHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHh-C-CccccccchhhhhcCCCC--C
Q psy6205 76 QDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQV-G-FGRVGTHWWAFQLQGDDI--I 143 (224)
Q Consensus 76 ~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~t-G-~GrtG~~~~~~~~~g~~v--~ 143 (224)
++++++++.. .++++.+|++|+++++.|.+.+.++..+.+++. +++ | ||++|. .+ +++.+ + .
T Consensus 165 ~~le~~l~~~--~~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~g~~g~-g~-~~~~~--~~~~ 238 (407)
T PRK09064 165 AHLEELLAAA--DPDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMYGPRGG-GI-AERDG--LMDR 238 (407)
T ss_pred HHHHHHHHhc--cCCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccccCCCCC-Ch-HHhcC--CCCC
Confidence 5677766532 225678999999999999999877777777776 665 7 699996 44 56666 5 5
Q ss_pred Cchh--ccccccc--CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Q psy6205 144 PDIV--TVGKPMG--NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETE-NLREHALDVGNQLHT 218 (224)
Q Consensus 144 pDi~--~~~K~l~--~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~-~l~~~~~~~g~~l~~ 218 (224)
|||+ ||||++| ||+ +++++++++.+......+.+|++.+|.++++++++|+++++. ...++++++.++|.+
T Consensus 239 ~div~~t~sKa~g~~GG~----~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~ 314 (407)
T PRK09064 239 IDIIEGTLAKAFGVMGGY----IAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKA 314 (407)
T ss_pred CeEEEEecchhhhccCce----EecCHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 7988 9999998 555 788999998876543345568889999999999999999764 456889999999999
Q ss_pred hhhhcC
Q psy6205 219 PKKENN 224 (224)
Q Consensus 219 ~l~~l~ 224 (224)
.|+++|
T Consensus 315 ~L~~~g 320 (407)
T PRK09064 315 ALDAAG 320 (407)
T ss_pred HHHHcC
Confidence 998753
No 91
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.50 E-value=1.5e-13 Score=123.14 Aligned_cols=134 Identities=16% Similarity=0.132 Sum_probs=106.7
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HH-hC-CccccccchhhhhcCCCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQ-VG-FGRVGTHWWAFQLQGDDIIP 144 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~-tG-~GrtG~~~~~~~~~g~~v~p 144 (224)
+++|+++++. ..++.+.||+|+|+++.|++.|.+++.+.+++. .. .| +|++|. +.++++| +.|
T Consensus 236 ~~~Le~~L~~---~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~--G~~e~~g--~~~ 308 (476)
T PLN02955 236 MYHLNSLLSS---CKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGG--GVAEEFN--CEA 308 (476)
T ss_pred HHHHHHHHHh---CCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCC--cHHHHhC--CCC
Confidence 4667766654 345568899999999999999988888888776 22 23 466665 6788998 888
Q ss_pred ch----hccccccc--CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHH
Q psy6205 145 DI----VTVGKPMG--NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLH 217 (224)
Q Consensus 145 Di----~~~~K~l~--~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~ 217 (224)
|+ .||||++| ||+ +++++++++.+...+..+.+|.+.+|..++++++++++++ ++...++++++.++|+
T Consensus 309 di~ii~~TLsKA~G~~GGf----i~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr 384 (476)
T PLN02955 309 DVDLCVGTLSKAAGCHGGF----IACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFK 384 (476)
T ss_pred CCcEEEEeCccchhccCce----eecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 87 68999999 778 8999999999987666677777888888899999999995 4567788999999988
Q ss_pred Hh
Q psy6205 218 TP 219 (224)
Q Consensus 218 ~~ 219 (224)
+.
T Consensus 385 ~~ 386 (476)
T PLN02955 385 AL 386 (476)
T ss_pred Hh
Confidence 74
No 92
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.49 E-value=3e-13 Score=119.79 Aligned_cols=139 Identities=22% Similarity=0.307 Sum_probs=106.6
Q ss_pred HHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHh-C-CccccccchhhhhcCCCC--C
Q psy6205 76 QDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQV-G-FGRVGTHWWAFQLQGDDI--I 143 (224)
Q Consensus 76 ~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~t-G-~GrtG~~~~~~~~~g~~v--~ 143 (224)
++++++++.. .++++.+|++|++++..|.+.|.+++.+.+++. +++ | +|++|. +.+++++ + .
T Consensus 164 ~~l~~~l~~~--~~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~g~~g~--g~~~~~~--~~~~ 237 (402)
T TIGR01821 164 AHLEKLLQSV--DPNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLYGPRGG--GIAERDG--LMHR 237 (402)
T ss_pred HHHHHHHHhc--cCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccccCCCCC--ccchhcc--CCCC
Confidence 4566666532 234678999999999999999877777777776 655 5 477775 3356666 5 4
Q ss_pred Cchh--ccccccc--CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHH
Q psy6205 144 PDIV--TVGKPMG--NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETE-NLREHALDVGNQLHT 218 (224)
Q Consensus 144 pDi~--~~~K~l~--~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~-~l~~~~~~~g~~l~~ 218 (224)
|||+ |++|++| ||+ +++++++++.+......+.+|++.+|.++++++++|+.+++. .+.++.+++.++|++
T Consensus 238 ~div~~t~sKa~g~~GG~----i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~ 313 (402)
T TIGR01821 238 IDIIEGTLAKAFGVVGGY----IAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKN 313 (402)
T ss_pred CeEEEEechhhhccCCce----eecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHH
Confidence 7888 9999998 555 788999999887543345568899999999999999999754 566778899999999
Q ss_pred hhhhcC
Q psy6205 219 PKKENN 224 (224)
Q Consensus 219 ~l~~l~ 224 (224)
.|+++|
T Consensus 314 ~L~~~g 319 (402)
T TIGR01821 314 LLEALG 319 (402)
T ss_pred HHHHcC
Confidence 998754
No 93
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.47 E-value=4.9e-13 Score=118.70 Aligned_cols=138 Identities=23% Similarity=0.287 Sum_probs=105.3
Q ss_pred HHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHh-CC-ccccccchhhhhcCCCCC--
Q psy6205 76 QDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQV-GF-GRVGTHWWAFQLQGDDII-- 143 (224)
Q Consensus 76 ~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~t-G~-GrtG~~~~~~~~~g~~v~-- 143 (224)
++++++++.. .++++++|++|+++++.|.+.|.++..+.+++. +++ |+ |++|. .+ +++++ +.
T Consensus 164 ~~l~~~l~~~--~~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~G~-g~-~~~~~--~~~~ 237 (406)
T PRK13393 164 ADLERKLSDL--DPHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLYGPRGG-GI-AEREG--LADR 237 (406)
T ss_pred HHHHHHHHhc--cCCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccccCCCCC-ch-hhhcC--CCCC
Confidence 4566666532 234678999999999999999977777777666 554 76 99996 44 47776 55
Q ss_pred Cchh--ccccccc--CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHH
Q psy6205 144 PDIV--TVGKPMG--NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETEN-LREHALDVGNQLHT 218 (224)
Q Consensus 144 pDi~--~~~K~l~--~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~-l~~~~~~~g~~l~~ 218 (224)
+||+ ++||++| ||+ +++++++.+.+......+.+|++++|.++++++++|+.+++.. ..+++++++++|++
T Consensus 238 ~~i~~~tlsKa~g~~GG~----~~~~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~ 313 (406)
T PRK13393 238 LTIIEGTLAKAFGVMGGY----ITGSAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRA 313 (406)
T ss_pred CeEEEEeCchhhcccCce----eeCCHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 6887 9999998 555 7789999988875533445788999999999999999986542 34667789999999
Q ss_pred hhhhc
Q psy6205 219 PKKEN 223 (224)
Q Consensus 219 ~l~~l 223 (224)
.|+++
T Consensus 314 ~L~~~ 318 (406)
T PRK13393 314 RLDKA 318 (406)
T ss_pred HHHHc
Confidence 99865
No 94
>PRK07505 hypothetical protein; Provisional
Probab=99.23 E-value=6e-11 Score=105.19 Aligned_cols=112 Identities=17% Similarity=0.208 Sum_probs=80.9
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HH--hCCccccccchhhhhcCCCC-CCchh----ccccccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQ--VGFGRVGTHWWAFQLQGDDI-IPDIV----TVGKPMG 154 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~--tG~GrtG~~~~~~~~~g~~v-~pDi~----~~~K~l~ 154 (224)
+..+++|+||+++.|++ .+.+++.+.+++. ++ +||||+|+ +++.++++ + .||.+ +++|+++
T Consensus 179 ~~~~~vl~~p~~~~G~~-~~~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~-~~~~~~~~--~~~~d~~i~~~s~sK~~~ 254 (402)
T PRK07505 179 NKTVAYVADGVYSMGGI-APVKELLRLQEKYGLFLYIDDAHGLSIYGKNGE-GYVRSELD--YRLNERTIIAASLGKAFG 254 (402)
T ss_pred CCCEEEEEecccccCCc-CCHHHHHHHHHHcCCEEEEECcccccCcCCCCC-chHHHHcC--CCCCCCeEEEEechhhhh
Confidence 35789999999988654 4445555555554 64 78999997 67888887 7 79965 7999998
Q ss_pred CCcccccce-ecHHHHHhhhcCCcccccCCCCc--HHHHHHHHHHHHHHhhhhHHHHH
Q psy6205 155 NGHPVAAVI-TTKEIAKSFQETGVEYFNTYGGN--PVSCAVANAVMEVLETENLREHA 209 (224)
Q Consensus 155 ~G~p~~av~-~~~~i~~~~~~~~~~~~~T~~~~--p~~~aaa~a~l~~~~~~~l~~~~ 209 (224)
++ -|.++ .++++.+.+... .+.+||++| +++|++++++|+++.++++.++.
T Consensus 255 ~~--Gg~~~~~~~~~~~~~~~~--~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~ 308 (402)
T PRK07505 255 AS--GGVIMLGDAEQIELILRY--AGPLAFSQSLNVAALGAILASAEIHLSEELDQLQ 308 (402)
T ss_pred cc--CeEEEeCCHHHHHHHHHh--CCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHH
Confidence 53 13344 478888888653 445677766 58999999999988766554433
No 95
>PRK07179 hypothetical protein; Provisional
Probab=99.12 E-value=8.3e-10 Score=98.05 Aligned_cols=137 Identities=19% Similarity=0.212 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhC--CccccccchhhhhcCCCCC-
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVG--FGRVGTHWWAFQLQGDDII- 143 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG--~GrtG~~~~~~~~~g~~v~- 143 (224)
+++|++.++. .+.++|++|+++++.|.+.|.++..+.+++. +++. +|++|. . .+++++ +.
T Consensus 170 ~~~l~~~l~~-----~~~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g~~g~-g-~~~~~~--~~~ 240 (407)
T PRK07179 170 VDHLRRQIER-----HGPGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHGPQGA-G-LVAELG--LTS 240 (407)
T ss_pred HHHHHHHHHh-----cCCeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcCCCCC-c-hHHhcC--CCC
Confidence 3555555531 2467899999999999999977777777766 6653 466765 2 355676 64
Q ss_pred -Cchhc--ccccccCCcccccceecHHHHHhhhcCCc--ccccCCCCcHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHH
Q psy6205 144 -PDIVT--VGKPMGNGHPVAAVITTKEIAKSFQETGV--EYFNTYGGNPVSCAVANAVMEVLETE-NLREHALDVGNQLH 217 (224)
Q Consensus 144 -pDi~~--~~K~l~~G~p~~av~~~~~i~~~~~~~~~--~~~~T~~~~p~~~aaa~a~l~~~~~~-~l~~~~~~~g~~l~ 217 (224)
+|+++ ++|++|+ ++|++++++++++.+..... .+.+|+ +|..++++.++++.+++. ++.++++++.++|+
T Consensus 241 ~vdi~~~S~sK~~g~--~~G~l~~~~~~~~~~~~~~~~~~~~~t~--~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~ 316 (407)
T PRK07179 241 RVHFITASLAKAFAG--RAGIITCPRELAEYVPFVSYPAIFSSTL--LPHEIAGLEATLEVIESADDRRARLHANARFLR 316 (407)
T ss_pred CCCEEEeechHhhhc--cCeEEEeCHHHHHHHHHhCcCeeeCCCC--CHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 48865 7999975 47889999999887753321 233343 466777788889998654 58899999999999
Q ss_pred HhhhhcC
Q psy6205 218 TPKKENN 224 (224)
Q Consensus 218 ~~l~~l~ 224 (224)
+.|+++|
T Consensus 317 ~~L~~~g 323 (407)
T PRK07179 317 EGLSELG 323 (407)
T ss_pred HHHHHcC
Confidence 9998753
No 96
>KOG1359|consensus
Probab=99.12 E-value=7.1e-10 Score=92.32 Aligned_cols=131 Identities=18% Similarity=0.189 Sum_probs=111.4
Q ss_pred CCCCceEEEEccccCCCCcccCCHHHHHHHHHH---------HHhCC-ccccccchhhhhcCCCCCCchh--cccccccC
Q psy6205 88 NGKRPCAFFAESLQSCGGQIIPPANYLREVYKH---------VQVGF-GRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN 155 (224)
Q Consensus 88 ~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~---------v~tG~-GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~ 155 (224)
...+.-.|+.|.++++.|++.|..+..+..+++ ..||| |.||. +..|.+|..-.+||+ |+||++||
T Consensus 190 ~k~r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaTgf~G~tGr--Gt~E~~~vm~~vdiinsTLgKAlGg 267 (417)
T KOG1359|consen 190 CKMRLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHATGFFGETGR--GTAEEFGVMGDVDIINSTLGKALGG 267 (417)
T ss_pred hhheEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccceeecCCCC--ChHHHhCCCCcceehhhhhhhhhcC
Confidence 345778899999999999999999988888888 88995 99997 678888822357876 89999994
Q ss_pred ---CcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhcC
Q psy6205 156 ---GHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVL-ETENLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 156 ---G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~-~~~~l~~~~~~~g~~l~~~l~~l~ 224 (224)
|| +.+++++.+.+++.++.|.++.+.+|.-...+.++++.+ ....+.++.+.+-+++++.++..|
T Consensus 268 a~GGy----ttgp~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~aG 336 (417)
T KOG1359|consen 268 ASGGY----TTGPKPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAAG 336 (417)
T ss_pred CCCCC----ccCChhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 57 899999999999888888888889998888899999998 466889999999999999887653
No 97
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.10 E-value=9.9e-10 Score=97.66 Aligned_cols=142 Identities=21% Similarity=0.243 Sum_probs=101.6
Q ss_pred HHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHh-CC-ccccccchhhhhcCCCCCCc
Q psy6205 76 QDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQV-GF-GRVGTHWWAFQLQGDDIIPD 145 (224)
Q Consensus 76 ~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~t-G~-GrtG~~~~~~~~~g~~v~pD 145 (224)
+++++.++.. ..++..+|++|++.+..|.+.+.+++.+.+++. +++ |+ |++|. .+ .++.+.--.+|
T Consensus 165 ~~l~~~l~~~--~~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g~~g~-g~-~~~~~~~~~~d 240 (410)
T PRK13392 165 ADLEEQLASV--DPDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYGARGG-GI-AERDGLMDRID 240 (410)
T ss_pred HHHHHHHHhc--cCCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcCCCCC-ch-hhhccCCCCCc
Confidence 3455555432 234678999999999999998877777777765 555 54 77775 33 45555111578
Q ss_pred hh--cccccccC-CcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHhhh
Q psy6205 146 IV--TVGKPMGN-GHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETE-NLREHALDVGNQLHTPKK 221 (224)
Q Consensus 146 i~--~~~K~l~~-G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~-~l~~~~~~~g~~l~~~l~ 221 (224)
++ +++|++|. | |.+++++++++.+......+..|.+.+|++++++.++|+.+++. ...+++++..++|++.|+
T Consensus 241 iv~~tlsK~~g~~G---G~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~ 317 (410)
T PRK13392 241 MIQGTLAKAFGCLG---GYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLN 317 (410)
T ss_pred EEEEEChHhhhccc---chhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 77 89999974 2 44778999999776543344467788999999999999988643 455678888999999998
Q ss_pred hcC
Q psy6205 222 ENN 224 (224)
Q Consensus 222 ~l~ 224 (224)
++|
T Consensus 318 ~~g 320 (410)
T PRK13392 318 ANG 320 (410)
T ss_pred HcC
Confidence 753
No 98
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.01 E-value=5.8e-09 Score=91.36 Aligned_cols=142 Identities=21% Similarity=0.264 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHh-C-CccccccchhhhhcCCCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQV-G-FGRVGTHWWAFQLQGDDIIP 144 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~t-G-~GrtG~~~~~~~~~g~~v~p 144 (224)
++++++.++. .+.+.+++++++++...|.+.+.++..+.+++. ++. | ++++|. .+ ...++.+..|
T Consensus 155 ~~~l~~~i~~---~~~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~-~~-~~~~~~~~~~ 229 (385)
T PRK05958 155 VDALEALLAK---WRAGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGR-GL-AAEAGLAGEP 229 (385)
T ss_pred HHHHHHHHHh---ccCCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccccccCCCCC-ch-HHhhCCCCCC
Confidence 3455655542 223578999999999889887777777777776 663 4 456665 22 3333322457
Q ss_pred c---hhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhh
Q psy6205 145 D---IVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLHTPK 220 (224)
Q Consensus 145 D---i~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~~l 220 (224)
| +.+++|+++. +-|++++++++++.+......+.++++.+|++++++.++|+.+++ +++.+++.++.+++.+.|
T Consensus 230 ~~i~~~s~sK~~~~--~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L 307 (385)
T PRK05958 230 DVILVGTLGKALGS--SGAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGL 307 (385)
T ss_pred ceEEEEechhhccc--CCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 7 5689999974 226688899998887543334456778899999999999999876 478899999999999999
Q ss_pred hhc
Q psy6205 221 KEN 223 (224)
Q Consensus 221 ~~l 223 (224)
+++
T Consensus 308 ~~~ 310 (385)
T PRK05958 308 RAL 310 (385)
T ss_pred HHc
Confidence 865
No 99
>KOG1360|consensus
Probab=98.99 E-value=4.8e-09 Score=90.65 Aligned_cols=142 Identities=20% Similarity=0.240 Sum_probs=110.5
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH---------HHhCC-ccccccchhhhhcCCCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH---------VQVGF-GRVGTHWWAFQLQGDDIIP 144 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~---------v~tG~-GrtG~~~~~~~~~g~~v~p 144 (224)
+++|+++++.. .+...--|-.|.|.++.|.+.|.++.++...++ ...|+ |--|. +.-|+-|.--+-
T Consensus 289 ~~hL~~lL~~~--~~svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGa--GvgerdGvm~kv 364 (570)
T KOG1360|consen 289 LDHLEQLLQSS--PKSVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGA--GVGERDGVMHKV 364 (570)
T ss_pred HHHHHHHHHhC--CCCCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhhhhccccCCCC--CccccCCcchhh
Confidence 67788888753 334445667899999999999999999998888 44553 55553 345666622257
Q ss_pred chh--ccccccc--CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHH
Q psy6205 145 DIV--TVGKPMG--NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETE---NLREHALDVGNQLH 217 (224)
Q Consensus 145 Di~--~~~K~l~--~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~---~l~~~~~~~g~~l~ 217 (224)
||+ |+||+.| ||| +..+..+.|.+++....|++|.+.+|.-++-|+++++++..+ .+...=++.-.+++
T Consensus 365 DiIsGTLgKafGcVGGY----IAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~k 440 (570)
T KOG1360|consen 365 DIISGTLGKAFGCVGGY----IAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVK 440 (570)
T ss_pred hhcccchhhhcccccce----ehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 888 7999999 568 889999999998776678899999999999999999999532 45566677788888
Q ss_pred HhhhhcC
Q psy6205 218 TPKKENN 224 (224)
Q Consensus 218 ~~l~~l~ 224 (224)
+.|.++|
T Consensus 441 q~l~~~G 447 (570)
T KOG1360|consen 441 QLLMELG 447 (570)
T ss_pred HHHHHcC
Confidence 8888765
No 100
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=98.98 E-value=5.9e-09 Score=91.56 Aligned_cols=143 Identities=18% Similarity=0.247 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHh-C-CccccccchhhhhcCC-CCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQV-G-FGRVGTHWWAFQLQGD-DII 143 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~t-G-~GrtG~~~~~~~~~g~-~v~ 143 (224)
+++|+++++.....+++..+|+++++.++.|.+.|-++..+.+++. +|+ | +|++|+ .+ ...++. ++.
T Consensus 127 ~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~-g~-~~~~~~~~~~ 204 (370)
T PRK05937 127 LDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGK-GF-CHSLGYENFY 204 (370)
T ss_pred HHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCC-ch-HHhhCCCCCc
Confidence 4566776654321223345688999999999999988888888876 554 5 677775 32 223330 133
Q ss_pred CchhcccccccC-CcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhh
Q psy6205 144 PDIVTVGKPMGN-GHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPK 220 (224)
Q Consensus 144 pDi~~~~K~l~~-G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l 220 (224)
+|+.|++|++|. | +++++.+++.+.+......+.++.+.+|.+++++.++++++++ +...++++++.++|.+.|
T Consensus 205 ~~~~tlsK~~g~~G---~~vl~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~l 281 (370)
T PRK05937 205 AVLVTYSKALGSMG---AALLSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQKF 281 (370)
T ss_pred EEEEechhhhhcCc---eEEEcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhc
Confidence 688999999975 4 3367777776665532224556677899999999999999964 346788889999998877
Q ss_pred hh
Q psy6205 221 KE 222 (224)
Q Consensus 221 ~~ 222 (224)
+.
T Consensus 282 ~~ 283 (370)
T PRK05937 282 SS 283 (370)
T ss_pred CC
Confidence 53
No 101
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=98.92 E-value=1.8e-08 Score=88.50 Aligned_cols=140 Identities=14% Similarity=0.187 Sum_probs=99.7
Q ss_pred HHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHh-C-CccccccchhhhhcCCCCCCc
Q psy6205 76 QDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQV-G-FGRVGTHWWAFQLQGDDIIPD 145 (224)
Q Consensus 76 ~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~t-G-~GrtG~~~~~~~~~g~~v~pD 145 (224)
+++++.+... ...+.++|+++++++..|.+.+.++..+.+++. ++. | ++++|. +...+++ +.||
T Consensus 150 ~~l~~~l~~~--~~~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~--~~~~ 223 (385)
T TIGR01825 150 DDLDRVLREN--PSYGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTYVDDAHGSGVMGEAGR--GTVHHFG--LEDK 223 (385)
T ss_pred HHHHHHHHhh--ccCCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEEEECcccccCcCCCCC--ccHhhcC--CCcC
Confidence 4555555421 224678999999999999988877777777776 553 3 566664 3455666 6666
Q ss_pred h----hcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhh
Q psy6205 146 I----VTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLHTPK 220 (224)
Q Consensus 146 i----~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~~l 220 (224)
. .+++|+++. +.|.+++++++++.+......+..+...+|..++++.++|+.+++ +++.++++++.+++.+.|
T Consensus 224 ~~i~~~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L 301 (385)
T TIGR01825 224 VDIQVGTLSKAIGV--VGGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGL 301 (385)
T ss_pred CcEEEEeccHHhhc--CCCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 3 689999963 225578899999888643222333445688999999999998853 578899999999999999
Q ss_pred hhc
Q psy6205 221 KEN 223 (224)
Q Consensus 221 ~~l 223 (224)
+++
T Consensus 302 ~~~ 304 (385)
T TIGR01825 302 GKL 304 (385)
T ss_pred HHc
Confidence 875
No 102
>PLN02483 serine palmitoyltransferase
Probab=98.92 E-value=1.5e-08 Score=92.21 Aligned_cols=126 Identities=18% Similarity=0.256 Sum_probs=94.7
Q ss_pred ceEEEEccccCCCCcccCCHHHHHHHHHH--------HHh-C-CccccccchhhhhcCCCCCC---chh--cccccccC-
Q psy6205 92 PCAFFAESLQSCGGQIIPPANYLREVYKH--------VQV-G-FGRVGTHWWAFQLQGDDIIP---DIV--TVGKPMGN- 155 (224)
Q Consensus 92 iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~t-G-~GrtG~~~~~~~~~g~~v~p---Di~--~~~K~l~~- 155 (224)
-..|++|++.++.|.+.+.++..+.+++. +++ | +|++|. +.+++++ +.| ||+ +++|++|.
T Consensus 241 k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~--g~~~~~~--v~~~~~dI~~~SfSKs~g~~ 316 (489)
T PLN02483 241 KIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGR--GVCELLG--VDPADVDIMMGTFTKSFGSC 316 (489)
T ss_pred eEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCC--chHHhcC--CCcccCcEEEEecchhcccC
Confidence 45889999999999999988998888887 432 2 578886 4667887 654 676 89999973
Q ss_pred CcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHHHHhhhhcC
Q psy6205 156 GHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETE-------NLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 156 G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~-------~l~~~~~~~g~~l~~~l~~l~ 224 (224)
| |.+++++++++.+......+.++.+.+|..+++++++|+++..+ ...++++++.++|++.|+++|
T Consensus 317 G---G~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G 389 (489)
T PLN02483 317 G---GYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMG 389 (489)
T ss_pred c---eEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCC
Confidence 2 44889999999987542222233345888898999999988532 356788899999999998753
No 103
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=98.86 E-value=3.9e-08 Score=86.64 Aligned_cols=145 Identities=21% Similarity=0.278 Sum_probs=99.9
Q ss_pred HHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HH-hCC-ccccccchhhhhcCCCCCCc
Q psy6205 76 QDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQ-VGF-GRVGTHWWAFQLQGDDIIPD 145 (224)
Q Consensus 76 ~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~-tG~-GrtG~~~~~~~~~g~~v~pD 145 (224)
+++++.++.......+...|+++++....|.+.+.++..+.+++. ++ .|+ |.+|. ...+..+..-.+|
T Consensus 155 ~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~~~~~--~~~~~~~~~~~~d 232 (393)
T TIGR01822 155 ADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLGPTGR--GSHELCGVMGRVD 232 (393)
T ss_pred HHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcCCCCC--chHHhcCCCCCCe
Confidence 455555543211223678999999999999988877777777776 55 443 45553 2334454111367
Q ss_pred hh--cccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhhhh
Q psy6205 146 IV--TVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 146 i~--~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~~l~~ 222 (224)
++ +++|.++| ...|++++++++++.+......+..+.+.+|..+++++++|+.+++ ++..++++++.+++.+.|++
T Consensus 233 i~~~s~sK~l~g-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~ 311 (393)
T TIGR01822 233 IITGTLGKALGG-ASGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEA 311 (393)
T ss_pred EEEEEChHHhhC-CCcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 77 78999975 4678899999999988653222333334467778888999998854 57889999999999999976
Q ss_pred c
Q psy6205 223 N 223 (224)
Q Consensus 223 l 223 (224)
+
T Consensus 312 ~ 312 (393)
T TIGR01822 312 A 312 (393)
T ss_pred c
Confidence 4
No 104
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=98.83 E-value=6.5e-08 Score=85.14 Aligned_cols=143 Identities=22% Similarity=0.315 Sum_probs=98.8
Q ss_pred HHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HH-hCC-ccccccchhhhhcCCCC--C
Q psy6205 76 QDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQ-VGF-GRVGTHWWAFQLQGDDI--I 143 (224)
Q Consensus 76 ~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~-tG~-GrtG~~~~~~~~~g~~v--~ 143 (224)
+++++.++.......++.+|+++++++..|...+-.+..+.+++. ++ .|+ +++|. +....++ + .
T Consensus 159 ~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~--~~~~~~~--~~~~ 234 (397)
T PRK06939 159 ADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGR--GTVEHFG--VMDR 234 (397)
T ss_pred HHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCC--CHHHHcC--CCCC
Confidence 445554442111223678899999999988876666676667666 55 354 44553 2344555 4 4
Q ss_pred Cchh--cccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhh
Q psy6205 144 PDIV--TVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLHTPK 220 (224)
Q Consensus 144 pDi~--~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~~l 220 (224)
+|++ +++|.++|+ ++|.+++++++++.+......+..+.+.+|..++++.++++.+++ +++.++++++.+++.+.|
T Consensus 235 ~~i~~~S~sK~~~g~-r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L 313 (397)
T PRK06939 235 VDIITGTLGKALGGA-SGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGM 313 (397)
T ss_pred CcEEEEECHHHhCcc-CceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 6787 899999654 778899999999988653222223444567778889999998864 478889999999999998
Q ss_pred hhc
Q psy6205 221 KEN 223 (224)
Q Consensus 221 ~~l 223 (224)
+++
T Consensus 314 ~~~ 316 (397)
T PRK06939 314 TAA 316 (397)
T ss_pred HHc
Confidence 765
No 105
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=98.66 E-value=2.4e-08 Score=88.96 Aligned_cols=81 Identities=31% Similarity=0.442 Sum_probs=62.6
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCCC---ccccCCCCCCCCCChhHHHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPCP---DVYRGKYPADKYPDEDLGVKYAQDV 78 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~P---~~yr~~~~~~~~~~~~~~~~~~~~l 78 (224)
++||.|+||||+|||+|||||++++|+.|....+..++.+++.++.+...+. ++.|...+-.. +++..+..++-|
T Consensus 362 ~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~~~nviRi~PPL~i--s~e~~d~~l~il 439 (447)
T COG0160 362 EKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGPHGNVLRILPPLTI--SDEELDEGLDIL 439 (447)
T ss_pred hhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccCCCCcEEEEeCCccc--CHHHHHHHHHHH
Confidence 3599999999999999999999999999999888888888877776665553 66665544332 356667777777
Q ss_pred HHHHHH
Q psy6205 79 QDLIEA 84 (224)
Q Consensus 79 ~~~~~~ 84 (224)
++.++.
T Consensus 440 ~~al~~ 445 (447)
T COG0160 440 EEALKE 445 (447)
T ss_pred HHHHHh
Confidence 777653
No 106
>KOG1403|consensus
Probab=98.64 E-value=2.3e-08 Score=83.76 Aligned_cols=42 Identities=50% Similarity=0.849 Sum_probs=38.0
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCC
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPP 43 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~ 43 (224)
++|++||||||.|||||||||+|.++++|++..+.+++.+..
T Consensus 353 ~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlk 394 (452)
T KOG1403|consen 353 QKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLK 394 (452)
T ss_pred hhccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHH
Confidence 359999999999999999999999999999988888777754
No 107
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=98.61 E-value=5.3e-07 Score=78.07 Aligned_cols=140 Identities=19% Similarity=0.229 Sum_probs=96.6
Q ss_pred HHHHHHHHHHccCC-CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCcccccc-chhhhhcCCCCCCc
Q psy6205 76 QDVQDLIEAMGRNG-KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTH-WWAFQLQGDDIIPD 145 (224)
Q Consensus 76 ~~l~~~~~~~~~~~-~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~-~~~~~~~g~~v~pD 145 (224)
+++++.++. .. .+.++++++++....|.+.+.++..+.+++. +++ +|+.+.. ......++ +.||
T Consensus 133 ~~l~~~~~~---~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~--~~~~ 206 (360)
T TIGR00858 133 EHLERLLEK---NRGERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHG-TGVLGEDGRGTLEHFG--LKPE 206 (360)
T ss_pred HHHHHHHHH---cccCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECccc-ccCcCCCCCchHHhcC--CCcc
Confidence 455555542 22 3578999999988888887777777777666 553 4333311 12234555 6666
Q ss_pred -----hhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHh
Q psy6205 146 -----IVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLHTP 219 (224)
Q Consensus 146 -----i~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~~ 219 (224)
+.+++|+++. +-|++++++++++.+......+..+.+.+|.+++++.++++.+++ +++.++++++.++|.+.
T Consensus 207 ~~~i~i~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~ 284 (360)
T TIGR00858 207 PVDIQVGTLSKALGS--YGAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAG 284 (360)
T ss_pred CCcEEEEechhhhhc--cCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 6689999975 225688899998877543223334556788889999999998864 46889999999999999
Q ss_pred hhhc
Q psy6205 220 KKEN 223 (224)
Q Consensus 220 l~~l 223 (224)
|+++
T Consensus 285 L~~~ 288 (360)
T TIGR00858 285 LEAL 288 (360)
T ss_pred HHHc
Confidence 9875
No 108
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=98.59 E-value=3.3e-07 Score=80.29 Aligned_cols=125 Identities=18% Similarity=0.147 Sum_probs=84.1
Q ss_pred ceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchh---ccccccc-CCccc
Q psy6205 92 PCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIV---TVGKPMG-NGHPV 159 (224)
Q Consensus 92 iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~---~~~K~l~-~G~p~ 159 (224)
..++++...+...|.+.+..+..+.++.. +.++|++.|. ....+..+ ..|+++ +|||.+| .|+++
T Consensus 161 ~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~-~~~~~~~~--~~~~~i~~~SfSK~~g~~GlRi 237 (368)
T PRK03317 161 PDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGT-PSALTLLP--EYPRLVVSRTMSKAFAFAGGRL 237 (368)
T ss_pred CCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCC-cCHHHHHH--hCCCEEEEEechhhhccchhhh
Confidence 33455554466678777655554444432 7777876664 34455554 568887 8999998 68999
Q ss_pred ccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhhhhc
Q psy6205 160 AAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 160 ~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~~l~~l 223 (224)
|++++++++++.+... ..+|..++++++++.++|+..++ .+..+++++.-+++.+.|++.
T Consensus 238 G~~~~~~~~~~~l~~~----~~~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 298 (368)
T PRK03317 238 GYLAAAPAVVDALRLV----RLPYHLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL 298 (368)
T ss_pred hhhhCCHHHHHHHHhc----CCCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999988643 24778899999999999875432 122333455555566666543
No 109
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=98.40 E-value=5.4e-06 Score=71.61 Aligned_cols=144 Identities=22% Similarity=0.232 Sum_probs=96.8
Q ss_pred HHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCC-CCCCch
Q psy6205 76 QDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGD-DIIPDI 146 (224)
Q Consensus 76 ~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~-~v~pDi 146 (224)
++++++++... ++.+.++|++++++...|...+-++..+.+++. ++. +|..+........+.. ...+|+
T Consensus 118 ~~le~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~-~g~~~~~~~~~~~~~~~~~~~~i 195 (349)
T cd06454 118 EDLEKLLREAR-RPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHS-VGVYGPHGRGVEEFGGLTDDVDI 195 (349)
T ss_pred HHHHHHHHHhh-ccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEcccc-ccccCCCCCChhhhccccccCcE
Confidence 45677766432 235778999999998889887766666666666 432 3323210001112210 123576
Q ss_pred h--cccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhhhhc
Q psy6205 147 V--TVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 147 ~--~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~~l~~l 223 (224)
+ +++|.++. +-|.++.++++++.+......+..+.+.++..++++.++|+.+++ ++..++++++.+++.+.|+++
T Consensus 196 ~~~s~sK~~~~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 273 (349)
T cd06454 196 IMGTLGKAFGA--VGGYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKEL 273 (349)
T ss_pred EEeechhhhcc--cCCEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc
Confidence 5 58999974 335588899998877654223344557889999999999999876 678899999999999998765
No 110
>KOG1357|consensus
Probab=98.39 E-value=2.2e-06 Score=75.39 Aligned_cols=142 Identities=15% Similarity=0.178 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHc------cC-CCCceEEEEccccCCCCcccCCHHHHHHHHHH---------HHhC-Cccccccchhhhh
Q psy6205 75 AQDVQDLIEAMG------RN-GKRPCAFFAESLQSCGGQIIPPANYLREVYKH---------VQVG-FGRVGTHWWAFQL 137 (224)
Q Consensus 75 ~~~l~~~~~~~~------~~-~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~---------v~tG-~GrtG~~~~~~~~ 137 (224)
..+||++++..- .+ +-+..-||+|.|.++.|.+..+|+.....++. ...| .|+||+ +.+++
T Consensus 253 m~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGr--gvce~ 330 (519)
T KOG1357|consen 253 MQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGR--GVCEY 330 (519)
T ss_pred HHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCc--ceeec
Confidence 456666665421 11 34567899999999999999999999988888 4555 689997 68999
Q ss_pred cCCCCCC---chh--ccccccc--CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh-------h
Q psy6205 138 QGDDIIP---DIV--TVGKPMG--NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET-------E 203 (224)
Q Consensus 138 ~g~~v~p---Di~--~~~K~l~--~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~-------~ 203 (224)
+| +.| ||+ |+-|+.| ||+ +.+++++.+.+...+..+.+....+|..+...+..|+++.- .
T Consensus 331 ~g--~d~~dvDImMGtftKSfga~GGy----iagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~ 404 (519)
T KOG1357|consen 331 FG--VDPEDVDIMMGTFTKSFGAAGGY----IAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGR 404 (519)
T ss_pred cC--CCchhheeecceehhhcccccce----ecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHH
Confidence 98 654 433 7889998 347 89999999998765434445556778888899999999863 2
Q ss_pred hHHHHHHHHHHHHHHhhhhcC
Q psy6205 204 NLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 204 ~l~~~~~~~g~~l~~~l~~l~ 224 (224)
...++++++..+++..|+.+|
T Consensus 405 ~k~~~l~~ns~yfr~~l~~~g 425 (519)
T KOG1357|consen 405 QKIERLAENSRYFRWELQKMG 425 (519)
T ss_pred HHHHHHHhhhHHHHHhhhcCc
Confidence 467788899999999998764
No 111
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=98.34 E-value=4.9e-06 Score=71.36 Aligned_cols=130 Identities=19% Similarity=0.186 Sum_probs=92.3
Q ss_pred CCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchh-hhhcCCCCCCchh--cccccc
Q psy6205 89 GKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWA-FQLQGDDIIPDIV--TVGKPM 153 (224)
Q Consensus 89 ~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~-~~~~g~~v~pDi~--~~~K~l 153 (224)
.+++.+|++++.+...|.+. +.+.++++.++ ++.++...+. ... ....+ ...-|++ +++|.+
T Consensus 130 ~~~~~~v~i~~~~~~tG~~~-~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~-~~~~~~~~~-~~~~~~~~~s~~K~~ 206 (350)
T cd00609 130 TPKTKLLYLNNPNNPTGAVL-SEEELEELAELAKKHGILIISDEAYAELVYDGE-PPPALALLD-AYERVIVLRSFSKTF 206 (350)
T ss_pred CccceEEEEECCCCCCCccc-CHHHHHHHHHHHHhCCeEEEEecchhhceeCCc-ccccccCcC-ccCcEEEEeeccccc
Confidence 35789999999777788765 45566655555 6666655554 221 01111 0112443 689999
Q ss_pred c-CCcccccceecH-HHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHH--hhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 154 G-NGHPVAAVITTK-EIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVL--ETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 154 ~-~G~p~~av~~~~-~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~--~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+ +|.++|++++++ ++.+.+... ....|+..++.++.++.+.|+.. .-+.+.++++++.+++.+.|+++
T Consensus 207 ~~~g~~~G~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 278 (350)
T cd00609 207 GLPGLRIGYLIAPPEELLERLKKL--LPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKEL 278 (350)
T ss_pred CCcccceEEEecCHHHHHHHHHHH--HHhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9 789999999999 888888654 33457888899999999999887 34567788889999999998865
No 112
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=98.18 E-value=1.7e-05 Score=69.91 Aligned_cols=119 Identities=21% Similarity=0.218 Sum_probs=77.4
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHh---CCccccccchhhhhcCCCCCCchhc--cc--
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQV---GFGRVGTHWWAFQLQGDDIIPDIVT--VG-- 150 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~t---G~GrtG~~~~~~~~~g~~v~pDi~~--~~-- 150 (224)
+++++|++++.. ..|.+. +++++++++ ++. +++++| . ..+|+++ ++
T Consensus 158 ~~t~~viv~~~~-~~G~~~---~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~-------~----~~~d~~~~s~~K~ 222 (398)
T cd00613 158 EEVAALMVQYPN-TLGVFE---DLIKEIADIAHSAGALVYVDGDNLNLTGLKPPG-------E----YGADIVVGNLQKT 222 (398)
T ss_pred CCeEEEEEECCC-CCceec---chHHHHHHHHHhcCCEEEEEeccccccCCCChH-------H----cCCCEEEeecccc
Confidence 468899999864 568773 456666666 221 122222 1 2379886 33
Q ss_pred -ccccCCcc-cccceecHHHHHhhhcCC---------------------------cccccCCCCcHHHHHHHHHHHHHHh
Q psy6205 151 -KPMGNGHP-VAAVITTKEIAKSFQETG---------------------------VEYFNTYGGNPVSCAVANAVMEVLE 201 (224)
Q Consensus 151 -K~l~~G~p-~~av~~~~~i~~~~~~~~---------------------------~~~~~T~~~~p~~~aaa~a~l~~~~ 201 (224)
|++|+|.| .|.+.+++++.+.+.... ....+||+++++.++++.++++.+.
T Consensus 223 ~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~ 302 (398)
T cd00613 223 GVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLG 302 (398)
T ss_pred CCCCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhC
Confidence 55555544 445556667777642110 0113578899999999999999886
Q ss_pred hh---hHHHHHHHHHHHHHHhhhhc
Q psy6205 202 TE---NLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 202 ~~---~l~~~~~~~g~~l~~~l~~l 223 (224)
++ ++.+++++++++|+++|+++
T Consensus 303 ~~g~~~~~~~~~~~~~~l~~~L~~~ 327 (398)
T cd00613 303 PEGLKEIAERAHLNANYLAKRLKEV 327 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 54 45688999999999999875
No 113
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=97.99 E-value=1.3e-05 Score=71.40 Aligned_cols=31 Identities=52% Similarity=0.827 Sum_probs=28.7
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCcc
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPAT 32 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~ 32 (224)
.+||+|+||||+|||.||||+++++++.|+.
T Consensus 362 ~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~ 392 (449)
T COG0161 362 ADHPLVGDVRGLGLIGAIELVADKATKTPFE 392 (449)
T ss_pred ccCCcEEEeeccceEEEEEEecccccccchh
Confidence 4689999999999999999999999999873
No 114
>KOG1404|consensus
Probab=97.94 E-value=3.9e-06 Score=72.68 Aligned_cols=37 Identities=51% Similarity=0.837 Sum_probs=28.5
Q ss_pred CCCcceeeccCCceeEEEEeecC-CCCCCccccchhhh
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCR-KQKTPATSEAQHVI 39 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~-~t~~p~~~~a~~l~ 39 (224)
+||+||||||+|||+|+|+|+|+ +.+.|.......+.
T Consensus 355 ~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~ 392 (442)
T KOG1404|consen 355 KHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIG 392 (442)
T ss_pred cCCceeecccceeEEEEEEecccCCCCCcchHHHHHHH
Confidence 59999999999999999999998 55555554433333
No 115
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=97.85 E-value=0.00025 Score=62.72 Aligned_cols=144 Identities=13% Similarity=0.053 Sum_probs=89.5
Q ss_pred HHHHHHHHHHH-ccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAM-GRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~-~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
.+++++.++.. ....+++.+|+++-..+..|.+.+-++..+.+++. -..++|.... ....+| +.-.+
T Consensus 141 ~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~---~~~~~g--~D~~~ 215 (387)
T PRK09331 141 PEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPV---DGKKLG--ADFIV 215 (387)
T ss_pred HHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCC---CHHHcC--CCEEE
Confidence 35555555421 11224688899998888889888888888888776 2222332221 222344 32334
Q ss_pred hcccccccCCcccccceecHHHHHhhhcCCcccc------cCCCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHh
Q psy6205 147 VTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYF------NTYGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLHTP 219 (224)
Q Consensus 147 ~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~------~T~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~~ 219 (224)
.++.|.++++.++|.+++++++.+.+......+. .+.+-++...++++++|+.+.+ .+..++..++.+++++.
T Consensus 216 ~s~~K~l~~~~~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l~~~ 295 (387)
T PRK09331 216 GSGHKSMAASAPSGVLATTEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWFVDE 295 (387)
T ss_pred eeCcccccCCCCEEEEEECHHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999877788999999998887654321111 1112334456666777777643 34566667888899999
Q ss_pred hhhc
Q psy6205 220 KKEN 223 (224)
Q Consensus 220 l~~l 223 (224)
|+++
T Consensus 296 L~~l 299 (387)
T PRK09331 296 LEKI 299 (387)
T ss_pred HhcC
Confidence 9876
No 116
>PRK05965 hypothetical protein; Provisional
Probab=97.61 E-value=9.6e-05 Score=66.96 Aligned_cols=87 Identities=22% Similarity=0.178 Sum_probs=51.6
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCcc---ccchhhhccCCCcceeecCCC-ccccCCCCCCCCCChhHHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPAT---SEAQHVITRPPVRMSTEAPCP-DVYRGKYPADKYPDEDLGVKYAQD 77 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~---~~a~~l~~~~~~~~~~~vp~P-~~yr~~~~~~~~~~~~~~~~~~~~ 77 (224)
++||.|+||||+|+|+|+||+.+..++.++. ..+..+....+..+.+..+.. +..+-..+... +++..++.++.
T Consensus 363 ~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g~~~i~~~PpL~i--t~~ei~~~~~~ 440 (459)
T PRK05965 363 RAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAFGDGVLGFAPALCC--TEGEFDLIFER 440 (459)
T ss_pred ccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEecCCcEEEEECCCcC--CHHHHHHHHHH
Confidence 4589999999999999999987665554432 123334333333344433322 22332212111 26777788888
Q ss_pred HHHHHHHHccCCC
Q psy6205 78 VQDLIEAMGRNGK 90 (224)
Q Consensus 78 l~~~~~~~~~~~~ 90 (224)
|++.++.+...++
T Consensus 441 l~~~l~~~~~~~~ 453 (459)
T PRK05965 441 TRKTLDDVLADPD 453 (459)
T ss_pred HHHHHHHHhcCcc
Confidence 8888877654444
No 117
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=97.59 E-value=0.00056 Score=60.04 Aligned_cols=119 Identities=16% Similarity=0.175 Sum_probs=71.3
Q ss_pred CceEEEE-ccccCCCCcccCCHHHHHHHHHH----------HHhCCccccccchhhhhcCCCCCCchh---ccccccc-C
Q psy6205 91 RPCAFFA-ESLQSCGGQIIPPANYLREVYKH----------VQVGFGRVGTHWWAFQLQGDDIIPDIV---TVGKPMG-N 155 (224)
Q Consensus 91 ~iaavi~-Epv~~~~G~~~~~~~~l~~~~~~----------v~tG~GrtG~~~~~~~~~g~~v~pDi~---~~~K~l~-~ 155 (224)
++.++++ .|. .-.|.+.+..++.+.++.. +..-|+..|. .. .+. ...|+++ +|||.+| .
T Consensus 155 ~~~~i~l~~P~-NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~-~~---~~~-~~~~~~i~~~SfSK~~g~~ 228 (369)
T PRK08153 155 NAPLVYLANPD-NPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGA-AP---PID-TDDPNVIRMRTFSKAYGLA 228 (369)
T ss_pred CCcEEEEeCCC-CCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCccc-ch---hhh-hcCCCEEEEecchHhccCc
Confidence 4445544 553 2257777776665555432 4333433332 11 111 0234433 7999998 7
Q ss_pred CcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHH----HHHHHHHhhhh
Q psy6205 156 GHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALD----VGNQLHTPKKE 222 (224)
Q Consensus 156 G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~----~g~~l~~~l~~ 222 (224)
|+.+|++++++++++.+... ..+++.++++.+++.+.|+ ++.+.+++++ .-+++.+.|++
T Consensus 229 GlRiG~~v~~~~~~~~l~~~----~~~~~~s~~~q~~~~~~l~---~~~~~~~~~~~~~~~r~~~~~~L~~ 292 (369)
T PRK08153 229 GARVGYAIGAPGTIKAFDKV----RNHFGMNRIAQAAALAALK---DQAYLAEVVGKIAAARDRIAAIARA 292 (369)
T ss_pred chheeeeecCHHHHHHHHHh----hcCCCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988643 2457789999999988885 3334444443 44444444443
No 118
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=97.59 E-value=0.00044 Score=60.36 Aligned_cols=76 Identities=14% Similarity=0.156 Sum_probs=55.8
Q ss_pred Cchh--cccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 144 PDIV--TVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 144 pDi~--~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
+|++ +++|+++|- -+|.+++++++.+.+......+ .|+.+|.++++++++|+.+..+...+.++++..++.+.++
T Consensus 195 ~divv~s~SKalaG~-r~G~v~~~~~li~~l~~~~~~~--~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~ 271 (346)
T TIGR03576 195 ADLVVTSTDKLMDGP-RGGLLAGRKELVDKIKSVGEQF--GLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFD 271 (346)
T ss_pred CcEEEeccchhcccc-ceEEEEeCHHHHHHHHHhhcCc--ccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHH
Confidence 4544 789988543 3566999999999987653333 3346888999999999887656677788888877777665
Q ss_pred h
Q psy6205 222 E 222 (224)
Q Consensus 222 ~ 222 (224)
.
T Consensus 272 ~ 272 (346)
T TIGR03576 272 K 272 (346)
T ss_pred h
Confidence 3
No 119
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.54 E-value=0.00011 Score=66.80 Aligned_cols=81 Identities=25% Similarity=0.249 Sum_probs=49.3
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCccc---cchhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATS---EAQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDV 78 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~---~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l 78 (224)
++||.|+||||+|||+|+||+.+..+++++.. .+..+....+..+.+..+..+..|...+..- +++..++.++-|
T Consensus 384 ~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~vi~~~PpL~i--t~~ei~~~~~~l 461 (472)
T PRK08742 384 GEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPLGDVLYWMPPYCV--DEAQLALLADTT 461 (472)
T ss_pred hcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEecCCEEEEECCCCC--CHHHHHHHHHHH
Confidence 45899999999999999999987766655432 1223333333334444343344443222211 266777778888
Q ss_pred HHHHHH
Q psy6205 79 QDLIEA 84 (224)
Q Consensus 79 ~~~~~~ 84 (224)
++.++.
T Consensus 462 ~~~l~~ 467 (472)
T PRK08742 462 RHAIDE 467 (472)
T ss_pred HHHHHH
Confidence 877764
No 120
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=97.54 E-value=0.00026 Score=62.25 Aligned_cols=122 Identities=11% Similarity=0.024 Sum_probs=78.1
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchh--cccccccC-C-ccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN-G-HPVAA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~-G-~p~~a 161 (224)
++.+|++|.+....|.+.+.+++.+.+++. |-.-+ -++. + ...+. ..+|++ +++|.++| | ...|+
T Consensus 125 ~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD~t~-~~~~-~--~~~~~--~g~Divv~S~tK~l~g~~~~~gG~ 198 (369)
T cd00614 125 ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTF-ATPY-L--QRPLE--LGADIVVHSATKYIGGHSDVIAGV 198 (369)
T ss_pred CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCC-cchh-c--CChhh--hCCcEEEeccceeccCCCCceEEE
Confidence 678999999998889888877776666665 11111 1121 1 11122 347887 78999986 4 67888
Q ss_pred ceecH-HHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh
Q psy6205 162 VITTK-EIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 162 v~~~~-~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~ 222 (224)
+++++ ++.+.+... ....++..+|..+++++..|+.+.. ..++..++.+++.+.|++
T Consensus 199 v~~~~~~l~~~l~~~--~~~~g~~~~p~~a~~~l~~l~tl~~--r~~~~~~na~~la~~L~~ 256 (369)
T cd00614 199 VVGSGEALIQRLRFL--RLALGTILSPFDAWLLLRGLKTLPL--RMERHSENALKVAEFLEK 256 (369)
T ss_pred EEeCcHHHHHHHHHH--HHhhCCCCCHHHHHHHHcCCCCHHH--HHHHHHHHHHHHHHHHHc
Confidence 99977 888777643 1123456788888888777765532 355555566666666654
No 121
>KOG1358|consensus
Probab=97.53 E-value=0.00013 Score=63.40 Aligned_cols=125 Identities=19% Similarity=0.195 Sum_probs=90.9
Q ss_pred ceEEEEccccCCCCcccCCHHHHHHHHHH---------HHhC-CccccccchhhhhcCCCC-CCchhc--cccccc--CC
Q psy6205 92 PCAFFAESLQSCGGQIIPPANYLREVYKH---------VQVG-FGRVGTHWWAFQLQGDDI-IPDIVT--VGKPMG--NG 156 (224)
Q Consensus 92 iaavi~Epv~~~~G~~~~~~~~l~~~~~~---------v~tG-~GrtG~~~~~~~~~g~~v-~pDi~~--~~K~l~--~G 156 (224)
--.+++|.+.-+.|.+.|.++.++.-.+. .+.| .|+||+ +-.+|++.++ .-||++ |.-+|+ ||
T Consensus 234 Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~Gr--GvteH~~v~~~~iDiv~~sm~~alas~Gg 311 (467)
T KOG1358|consen 234 RRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGR--GVTEHFGVPITDIDIVTASMETALASGGG 311 (467)
T ss_pred eEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCc--cccccCCCCccceeeeeecccccccccCc
Confidence 45789999999999999999999988888 4555 699997 6899998332 256665 455555 44
Q ss_pred cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhh
Q psy6205 157 HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 157 ~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~ 222 (224)
+ ++++.-+.+.-+=.+..+-++-+..|+...||..++++++ +++..+.++.....+.+.|+.
T Consensus 312 F----c~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~ 374 (467)
T KOG1358|consen 312 F----CAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSS 374 (467)
T ss_pred e----eecceeeEeeeeccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhhccccccchhhhc
Confidence 6 5665555443221233455677788999999999999996 467788888877777777654
No 122
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=97.44 E-value=0.002 Score=56.57 Aligned_cols=143 Identities=10% Similarity=0.088 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHc-cCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMG-RNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~-~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
+++|++.++... ...++..+|+++-..+..|.+.+.++..+.+++. -..++|..+. .... ..+|+
T Consensus 129 ~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~---~~~~----~~~di 201 (370)
T TIGR02539 129 PEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPV---SAKE----IGADF 201 (370)
T ss_pred HHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCC---CHHH----cCCCE
Confidence 455555554211 1113566788776667778888888888877776 2222332221 0111 23675
Q ss_pred h--cccccccCCcccccceecHHHHHhhhcCCcccc-cC-----CCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHH
Q psy6205 147 V--TVGKPMGNGHPVAAVITTKEIAKSFQETGVEYF-NT-----YGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLH 217 (224)
Q Consensus 147 ~--~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~-~T-----~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~ 217 (224)
+ +++|.+++|.++|.+++++++.+.+......+. ++ ....+.+++++.++|+.+.+ -....+..+..++|+
T Consensus 202 ~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~ 281 (370)
T TIGR02539 202 IVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFV 281 (370)
T ss_pred EEeeCcccccCCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 789999876789999999999998765422111 01 01112356666677765422 122333344467899
Q ss_pred HhhhhcC
Q psy6205 218 TPKKENN 224 (224)
Q Consensus 218 ~~l~~l~ 224 (224)
++|+++|
T Consensus 282 ~~L~~~g 288 (370)
T TIGR02539 282 AELEDIG 288 (370)
T ss_pred HHHHhCC
Confidence 9998764
No 123
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=97.43 E-value=0.002 Score=58.56 Aligned_cols=139 Identities=15% Similarity=0.068 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-------HHhCCccccccchhhhhcCCCCCCchh
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDIV 147 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi~ 147 (224)
.+++++++.. .+- .||+-..... +...+-+++.+.+++. ...++|-.|-..+ .++++.--..|++
T Consensus 209 ~d~l~~~~~~-----~~p-lvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~-~~~~~~~~~~D~v 280 (493)
T PRK13580 209 YDEIAALARE-----FKP-LILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVF-TGDEDPVPHADIV 280 (493)
T ss_pred HHHHHHHHhh-----cCC-EEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccc-hhhcCCCCCCcEE
Confidence 4566666642 222 3333333322 4355656666666665 2223333331111 1222200246765
Q ss_pred --cccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHhhhh
Q psy6205 148 --TVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 148 --~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~~~l~~ 222 (224)
|++|+|.|-. -|.+++++++.+.+... ..+.++..-.|..+|++.+ +..+.+ ..+.+++.++.++|++.|++
T Consensus 281 tgT~hKaL~GP~-GG~I~~~~~l~~~L~~a-~P~i~gg~l~p~iAA~avA-l~e~~~~ef~~y~~~l~~Na~~La~~L~~ 357 (493)
T PRK13580 281 TTTTHKTLRGPR-GGLVLAKKEYADAVDKG-CPLVLGGPLPHVMAAKAVA-LAEARTPEFQKYAQQVVDNARALAEGFLK 357 (493)
T ss_pred EeCChhhccCCC-eEEEEecHHHHHHHhhC-CCcccCCCccHHHHHHHHH-HHHHhCccHHHHHHHHHHHHHHHHHHHHh
Confidence 6899994311 23488899998888432 3444454555655555555 555532 34889999999999999987
Q ss_pred cC
Q psy6205 223 NN 224 (224)
Q Consensus 223 l~ 224 (224)
+|
T Consensus 358 ~G 359 (493)
T PRK13580 358 RG 359 (493)
T ss_pred cC
Confidence 65
No 124
>PRK06108 aspartate aminotransferase; Provisional
Probab=97.43 E-value=0.0015 Score=57.21 Aligned_cols=129 Identities=16% Similarity=0.110 Sum_probs=78.1
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccc-cccchhhhhcCCCCCCc---hhccccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRV-GTHWWAFQLQGDDIIPD---IVTVGKPMG 154 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~Grt-G~~~~~~~~~g~~v~pD---i~~~~K~l~ 154 (224)
++.++++.....-.|.+. +.+.++++.++ +..+|-.. +.....+..+- +..+. +.+++|.+|
T Consensus 158 ~~~~i~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~g 235 (382)
T PRK06108 158 RTRALFINSPNNPTGWTA-SRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIA-EPDDRIIFVNSFSKNWA 235 (382)
T ss_pred cceEEEEECCCCCCCccc-CHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcC-CCcCCEEEEeechhhcc
Confidence 455666654455567654 56666666655 44444211 11011111110 01122 237999997
Q ss_pred -CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 155 -NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 155 -~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
.|+.+|++++++++.+.+... ....+++.++++.+++.+.|+.-++ +++.+++++.-+++.+.|+++
T Consensus 236 ~~G~RiG~~~~~~~~~~~~~~~--~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 305 (382)
T PRK06108 236 MTGWRLGWLVAPPALGQVLEKL--IEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRAL 305 (382)
T ss_pred CcccceeeeeCCHHHHHHHHHH--HHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 589999999999999887643 2234666788888888888865321 356777788888888887654
No 125
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=97.41 E-value=0.0013 Score=57.34 Aligned_cols=127 Identities=20% Similarity=0.161 Sum_probs=75.4
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH----------HHhCCccccccchhhhhcCCCCCCchh---ccccccc-CC
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH----------VQVGFGRVGTHWWAFQLQGDDIIPDIV---TVGKPMG-NG 156 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----------v~tG~GrtG~~~~~~~~~g~~v~pDi~---~~~K~l~-~G 156 (224)
+..+|++.-.+...|.+.+..+..+.++.. +...+...+....+..... ..++++ +++|.+| .|
T Consensus 154 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~g~~G 231 (367)
T PRK02731 154 RTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVA--KFPNVVVTRTFSKAYGLAG 231 (367)
T ss_pred CCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHh--hcCCEEEEeeehHhhcCcc
Confidence 455666665566688877776655555431 3333322221011222222 335555 7899997 68
Q ss_pred cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 157 HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 157 ~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+.+|.+++++++.+.+... ..++..++++.+++.+.|+-.+ -++..++.+++-+++.+.|++.
T Consensus 232 ~RiG~l~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 295 (367)
T PRK02731 232 LRVGYGIAPPEIIDALNRV----RQPFNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL 295 (367)
T ss_pred cceeeeeCCHHHHHHHHHc----cCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999999888643 2356678888888877775211 1234444555556666666553
No 126
>PRK07682 hypothetical protein; Validated
Probab=97.41 E-value=0.0016 Score=57.24 Aligned_cols=128 Identities=11% Similarity=0.066 Sum_probs=76.8
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCc---hhccccccc-
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPD---IVTVGKPMG- 154 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pD---i~~~~K~l~- 154 (224)
++.++++..-+.-.|. ..+++.++++.++ +...|...+. +..+.... +..+. +-++||.++
T Consensus 154 ~~~~v~~~~p~NPtG~-~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~-~~~~~~i~~~S~SK~~~~ 230 (378)
T PRK07682 154 KTKAILLCSPNNPTGA-VLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIK-GMRERTILISGFSKGFAM 230 (378)
T ss_pred ccEEEEEECCCCCcCc-CcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhcc-cccCCEEEEecCcccccC
Confidence 4566655433445666 4455666666555 5555533332 11111111 12222 447999998
Q ss_pred CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 155 NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 155 ~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~~l~~l 223 (224)
.|+.+|.+++++++++.+... ...++++.++++.+++.+.|+.-+ -+.+.++.++.-+++.+.|+++
T Consensus 231 ~GlR~G~~~~~~~~i~~l~~~--~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 299 (378)
T PRK07682 231 TGWRLGFIAAPVYFSEAMLKI--HQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI 299 (378)
T ss_pred hhhhhhhhhcCHHHHHHHHHH--HHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 689999999999999988643 222455667888888887775321 2345556677777777777654
No 127
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.38 E-value=0.00027 Score=64.03 Aligned_cols=82 Identities=22% Similarity=0.208 Sum_probs=49.6
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCccc---cchhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATS---EAQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDV 78 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~---~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l 78 (224)
++||.|+||||+|||+|+||+.++.++.++.. .+..+.......+.+..+..+..+...+... +++..++.++.|
T Consensus 372 ~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~l~~~Ppl~i--t~~~id~~~~~l 449 (460)
T PRK06916 372 FALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPLGNTIVFMPPLAS--TIDELDEMLRIL 449 (460)
T ss_pred hcCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEecCCEEEEeCCccc--CHHHHHHHHHHH
Confidence 35899999999999999999987766655432 1233443433344444443343332212111 256677778888
Q ss_pred HHHHHHH
Q psy6205 79 QDLIEAM 85 (224)
Q Consensus 79 ~~~~~~~ 85 (224)
++.++.+
T Consensus 450 ~~~l~~~ 456 (460)
T PRK06916 450 YKAISDV 456 (460)
T ss_pred HHHHHhh
Confidence 8777654
No 128
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=97.36 E-value=0.003 Score=54.47 Aligned_cols=138 Identities=11% Similarity=0.067 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
.+++++.+.. ++ ++..+++--.....|.+.+.++..+.+++. +++ ||.. .+....++ .|+
T Consensus 113 ~~~l~~~l~~---~~-~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s-~g~~---~~~~~~~~----~d~ 180 (355)
T TIGR03301 113 LNRIEEALAA---DP-DITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSS-FGAI---PIDIEELD----VDA 180 (355)
T ss_pred HHHHHHHHHh---CC-CceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccc-cCCc---ccchhhcC----ccE
Confidence 4556665542 32 444443322334467777766666666666 322 4321 12223333 454
Q ss_pred --hcccccccCCcccccceecHHHHHhhhcCCccc---------------ccCCCCcHHHHHHHHHHHHHHhhh----hH
Q psy6205 147 --VTVGKPMGNGHPVAAVITTKEIAKSFQETGVEY---------------FNTYGGNPVSCAVANAVMEVLETE----NL 205 (224)
Q Consensus 147 --~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~---------------~~T~~~~p~~~aaa~a~l~~~~~~----~l 205 (224)
.+++|.++|+.-+|.+++++++++.+......+ ...|+.++.+..++.++|+.+.++ +.
T Consensus 181 ~~~s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~ 260 (355)
T TIGR03301 181 LIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPAR 260 (355)
T ss_pred EEecCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHH
Confidence 578999875433688999999988765211010 124556778888888999988543 35
Q ss_pred HHHHHHHHHHHHHhhhhcC
Q psy6205 206 REHALDVGNQLHTPKKENN 224 (224)
Q Consensus 206 ~~~~~~~g~~l~~~l~~l~ 224 (224)
.++.+++.+++.+.|++++
T Consensus 261 ~~~~~~~~~~~~~~L~~~g 279 (355)
T TIGR03301 261 IARYRRNRELLVDGLRALG 279 (355)
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 6678888899999887653
No 129
>PLN02721 threonine aldolase
Probab=97.33 E-value=0.0031 Score=54.49 Aligned_cols=138 Identities=18% Similarity=0.196 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHcc-CCCCceEEEEccccCCCCcccCCHHHHHHHHHH-HHhCCccc---ccc-chhhhhcCCCCCC----
Q psy6205 75 AQDVQDLIEAMGR-NGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-VQVGFGRV---GTH-WWAFQLQGDDIIP---- 144 (224)
Q Consensus 75 ~~~l~~~~~~~~~-~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-v~tG~Grt---G~~-~~~~~~~g~~v~p---- 144 (224)
.+++++.++.... +..+..+|++++++.+.|-...+.+.++++.++ -..|. .. +.. ++.....+ ..+
T Consensus 120 ~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~-~livD~a~~~~~~~~~~--~~~~~~~ 196 (353)
T PLN02721 120 LDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGL-KLHIDGARIFNASVALG--VPVHRLV 196 (353)
T ss_pred HHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCC-EEEEEchhhhcchhhhC--CCHHHHh
Confidence 4556655542110 114678999999988755455676677777666 11111 00 000 00000111 222
Q ss_pred ---c--hhcccccccCCccccc-ceecHHHHHhhhcCCcccccCCCC----cHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q psy6205 145 ---D--IVTVGKPMGNGHPVAA-VITTKEIAKSFQETGVEYFNTYGG----NPVSCAVANAVMEVLETENLREHALDVGN 214 (224)
Q Consensus 145 ---D--i~~~~K~l~~G~p~~a-v~~~~~i~~~~~~~~~~~~~T~~~----~p~~~aaa~a~l~~~~~~~l~~~~~~~g~ 214 (224)
| +++++|++++ |+|+ +++++++.+.+... ..++.+ .+..+++++..++...+ ..++..++.+
T Consensus 197 ~~~d~~~~s~sK~l~~--~~G~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~ 268 (353)
T PLN02721 197 KAADSVSVCLSKGLGA--PVGSVIVGSKSFIRKAKRL----RKTLGGGMRQVGVLAAAALVALQENVP--KLEDDHKKAK 268 (353)
T ss_pred hhCCEEEEecccccCC--ceeeEEecCHHHHHhHHHH----HHhcCCCeehhHHHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 3 4578999874 5565 56788887765421 112221 12334445555544322 2334456667
Q ss_pred HHHHhhhhc
Q psy6205 215 QLHTPKKEN 223 (224)
Q Consensus 215 ~l~~~l~~l 223 (224)
++.+.|+++
T Consensus 269 ~l~~~L~~~ 277 (353)
T PLN02721 269 LLAEGLNQI 277 (353)
T ss_pred HHHHHHHhC
Confidence 787777654
No 130
>PRK06225 aspartate aminotransferase; Provisional
Probab=97.33 E-value=0.0021 Score=56.54 Aligned_cols=124 Identities=15% Similarity=0.177 Sum_probs=72.0
Q ss_pred CceEE-EEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhccccccc-CC
Q psy6205 91 RPCAF-FAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMG-NG 156 (224)
Q Consensus 91 ~iaav-i~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~-~G 156 (224)
++.++ ++.| ....|.+. +++.++++.++ ++..|. .+. ....+ +..+...++.+++|.+| .|
T Consensus 157 ~~~~v~l~~p-~NptG~~~-~~~~~~~i~~~a~~~~~~ii~De~y~~~~-~~~-~~~~~-~~~~~~i~~~s~SK~~g~~G 231 (380)
T PRK06225 157 NTRLIYLIDP-LNPLGSSY-TEEEIKEFAEIARDNDAFLLHDCTYRDFA-REH-TLAAE-YAPEHTVTSYSFSKIFGMAG 231 (380)
T ss_pred CceEEEEeCC-CCCCCcCC-CHHHHHHHHHHHHHCCcEEEEehhHHHHh-ccC-Cchhh-cCCCCEEEEeechhhcCCcc
Confidence 45454 4566 33456544 55566666665 444442 121 11111 11012234668999998 68
Q ss_pred cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhh
Q psy6205 157 HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 157 ~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~ 222 (224)
+.+|++++++++++.+... ...+++.|.++++++.+.|+...+ +.+.+..++.-+.+.+.|++
T Consensus 232 ~RiG~i~~~~~l~~~~~~~---~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 296 (380)
T PRK06225 232 LRIGAVVATPDLIEVVKSI---VINDLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDE 296 (380)
T ss_pred ceeEEEecCHHHHHHHHHH---HhcccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999887642 235777889998888888865321 22233334444455555554
No 131
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=97.30 E-value=0.00031 Score=63.69 Aligned_cols=81 Identities=35% Similarity=0.381 Sum_probs=47.0
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCC-CccccCCCCCCCCCChhHHHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPC-PDVYRGKYPADKYPDEDLGVKYAQDVQDL 81 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~-P~~yr~~~~~~~~~~~~~~~~~~~~l~~~ 81 (224)
+||.|++|||+|||+|+||+.+..++.+....+..+...+...+.+..+. .+..+..++... +++..++.++.+++.
T Consensus 371 ~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~i~~~Ppl~i--t~~eid~~~~~l~~~ 448 (459)
T PRK06082 371 KYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVSQGNVIQLSPPLII--TREELTQALAILEEA 448 (459)
T ss_pred hCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEecCCCEEEEeCCCcc--CHHHHHHHHHHHHHH
Confidence 48999999999999999998766555443332333333333333333222 232222222111 266677778888877
Q ss_pred HHHH
Q psy6205 82 IEAM 85 (224)
Q Consensus 82 ~~~~ 85 (224)
+..+
T Consensus 449 l~~~ 452 (459)
T PRK06082 449 IAKI 452 (459)
T ss_pred HHHH
Confidence 7654
No 132
>PRK07483 hypothetical protein; Provisional
Probab=97.24 E-value=0.00046 Score=62.29 Aligned_cols=82 Identities=29% Similarity=0.314 Sum_probs=47.5
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCccc---cchhhhccCCCcceeecCC--------CccccCCCCCCCCCChhH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATS---EAQHVITRPPVRMSTEAPC--------PDVYRGKYPADKYPDEDL 70 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~---~a~~l~~~~~~~~~~~vp~--------P~~yr~~~~~~~~~~~~~ 70 (224)
++||.|+||||+|||+|+||+.+..++.|+.. .+..+....+..+.+..+. ++..|-.++-.- +++.
T Consensus 346 ~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~i--t~~e 423 (443)
T PRK07483 346 GQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFII--TAAQ 423 (443)
T ss_pred hcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCCCC--CHHH
Confidence 45899999999999999999977655555322 1222333333334433322 123332111111 3667
Q ss_pred HHHHHHHHHHHHHHH
Q psy6205 71 GVKYAQDVQDLIEAM 85 (224)
Q Consensus 71 ~~~~~~~l~~~~~~~ 85 (224)
.++.++.|++.++.+
T Consensus 424 id~~~~~l~~~l~~~ 438 (443)
T PRK07483 424 IDEIVERLGDAIDAA 438 (443)
T ss_pred HHHHHHHHHHHHHHH
Confidence 777888888877654
No 133
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=97.24 E-value=0.0052 Score=55.98 Aligned_cols=137 Identities=13% Similarity=-0.044 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEE-ccccCCCCcccCCHHHHHHHHHH-------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFA-ESLQSCGGQIIPPANYLREVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~-Epv~~~~G~~~~~~~~l~~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
.++|++++.. . +...||+ |.+.++.+++. .+.+.+++. ...++|-.+..... ..+ -..|+
T Consensus 172 ~d~Le~~l~~---~--~pklIv~~~S~~s~~~D~a---~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~-~p~---~~~Di 239 (475)
T PLN03226 172 YDKLEKKAML---F--RPKLIIAGASAYPRDWDYA---RMRKIADKVGALLMCDMAHISGLVAAQEAA-SPF---EYCDV 239 (475)
T ss_pred HHHHHHHHhh---c--CCeEEEEecCcCCCccCHH---HHHHHHHHcCCEEEEEchhhhCcccCCCCC-CCC---CCCeE
Confidence 4667666653 2 2223444 77776655443 444445554 22233333321111 112 13677
Q ss_pred h--cccccccCCcccccceecHHHH-----------Hh--hhcCCcccccCCCCcHHHHHHHHHHHHHHhhh---hHHHH
Q psy6205 147 V--TVGKPMGNGHPVAAVITTKEIA-----------KS--FQETGVEYFNTYGGNPVSCAVANAVMEVLETE---NLREH 208 (224)
Q Consensus 147 ~--~~~K~l~~G~p~~av~~~~~i~-----------~~--~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~---~l~~~ 208 (224)
+ |+.|+|.|-.- |.+++++++. +. ..+.......+-+-||..+++..++|+++.++ .+.++
T Consensus 240 v~~t~hK~L~GP~G-g~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~ 318 (475)
T PLN03226 240 VTTTTHKSLRGPRG-GMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQ 318 (475)
T ss_pred EEecCcccccCCCc-eEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 6 57799953110 2366676543 22 22222222233345677888888889999643 46899
Q ss_pred HHHHHHHHHHhhhhcC
Q psy6205 209 ALDVGNQLHTPKKENN 224 (224)
Q Consensus 209 ~~~~g~~l~~~l~~l~ 224 (224)
+.++.++|.+.|+++|
T Consensus 319 ~~~na~~L~~~L~~~G 334 (475)
T PLN03226 319 VKANAAALANRLMSKG 334 (475)
T ss_pred HHHHHHHHHHHHHhCC
Confidence 9999999999998764
No 134
>PRK06105 aminotransferase; Provisional
Probab=97.23 E-value=0.00045 Score=62.63 Aligned_cols=82 Identities=22% Similarity=0.235 Sum_probs=47.6
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCccc---cchhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATS---EAQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDV 78 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~---~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l 78 (224)
++||.|++|||+|+|+||||+.+..+++++.. .+..+.......+.+..+..+..|...+.+- +++..++.++.|
T Consensus 366 ~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~g~~i~l~Ppl~i--t~~eid~~~~~l 443 (460)
T PRK06105 366 ADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAMGDTLAFCPPLII--TAAQVDEMVDRF 443 (460)
T ss_pred hcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEecCCEEEEECCCcc--CHHHHHHHHHHH
Confidence 45899999999999999999876655555322 1233333333334444333333332111111 256667777777
Q ss_pred HHHHHHH
Q psy6205 79 QDLIEAM 85 (224)
Q Consensus 79 ~~~~~~~ 85 (224)
++.++.+
T Consensus 444 ~~~l~~~ 450 (460)
T PRK06105 444 GRALDDV 450 (460)
T ss_pred HHHHHHH
Confidence 7777654
No 135
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.20 E-value=0.00051 Score=62.41 Aligned_cols=82 Identities=21% Similarity=0.158 Sum_probs=49.8
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCccc---cchhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATS---EAQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDV 78 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~---~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l 78 (224)
++||.|+||||+|||+|+|++.++.++.|... .+..+..+....+.+..+..+..|...+... +++..++.++.+
T Consensus 363 ~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~i~~~Ppl~i--t~~eid~~~~~l 440 (466)
T PRK07030 363 ADHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPLGSVVYFLPPYVI--TPEQIDFLAEVA 440 (466)
T ss_pred hcCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEecCCEEEEECCccC--CHHHHHHHHHHH
Confidence 45899999999999999999977665554321 1223333333344444333333332222111 367777888888
Q ss_pred HHHHHHH
Q psy6205 79 QDLIEAM 85 (224)
Q Consensus 79 ~~~~~~~ 85 (224)
++.++.+
T Consensus 441 ~~al~~~ 447 (466)
T PRK07030 441 SEGIDIA 447 (466)
T ss_pred HHHHHHH
Confidence 8888765
No 136
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=97.18 E-value=0.0027 Score=54.55 Aligned_cols=80 Identities=18% Similarity=0.088 Sum_probs=53.8
Q ss_pred CCchh--cccccccCCccccc-ceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Q psy6205 143 IPDIV--TVGKPMGNGHPVAA-VITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTP 219 (224)
Q Consensus 143 ~pDi~--~~~K~l~~G~p~~a-v~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~ 219 (224)
.+|++ +++|.++. |.++ +++++++.+.+......+.+++..++++++++++.|+.-......+++.++.+++.+.
T Consensus 186 ~~d~~~~s~sK~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~ 263 (338)
T cd06502 186 GVDSVSFCLSKGGGA--PVGAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEA 263 (338)
T ss_pred cCCEEEEeccccCCC--ccceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHH
Confidence 46665 67888862 3344 4578888888764322334566778888888888886422234567888888999999
Q ss_pred hhhcC
Q psy6205 220 KKENN 224 (224)
Q Consensus 220 l~~l~ 224 (224)
|++++
T Consensus 264 L~~~~ 268 (338)
T cd06502 264 LEELG 268 (338)
T ss_pred HHhcC
Confidence 98753
No 137
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=97.16 E-value=0.0066 Score=52.66 Aligned_cols=126 Identities=12% Similarity=0.082 Sum_probs=80.3
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhcc--cccccCCcccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTV--GKPMGNGHPVA 160 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~--~K~l~~G~p~~ 160 (224)
++.+|++-......|.+.+.++..+.+++. ++ ++|..- +....++ +|+++. .|.++++..+|
T Consensus 124 ~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~-~~g~~~---~~~~~~~----~d~~~~s~~K~l~~p~g~G 195 (356)
T cd06451 124 DIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVS-SLGGEP---FRMDEWG----VDVAYTGSQKALGAPPGLG 195 (356)
T ss_pred CCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeeh-hccCcc---ccccccC----ccEEEecCchhccCCCCcc
Confidence 566777766666688887766655555555 32 233211 1222223 576654 69998766678
Q ss_pred cceecHHHHHhhhc--CCcc---------------cccCCCCcHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHhh
Q psy6205 161 AVITTKEIAKSFQE--TGVE---------------YFNTYGGNPVSCAVANAVMEVLETE---NLREHALDVGNQLHTPK 220 (224)
Q Consensus 161 av~~~~~i~~~~~~--~~~~---------------~~~T~~~~p~~~aaa~a~l~~~~~~---~l~~~~~~~g~~l~~~l 220 (224)
+++.+++.++.+.. .... ++.+.+.++.+.+++.++++.+.+. .+.++.+++.+++.+.|
T Consensus 196 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L 275 (356)
T cd06451 196 PIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGL 275 (356)
T ss_pred eeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 89999998877652 1000 0122344566778888999888643 56788889999999999
Q ss_pred hhcC
Q psy6205 221 KENN 224 (224)
Q Consensus 221 ~~l~ 224 (224)
+++|
T Consensus 276 ~~~g 279 (356)
T cd06451 276 EALG 279 (356)
T ss_pred HHcC
Confidence 8653
No 138
>PRK03321 putative aminotransferase; Provisional
Probab=97.16 E-value=0.0029 Score=54.96 Aligned_cols=103 Identities=20% Similarity=0.230 Sum_probs=65.4
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH----------HHhCCccccccchhhhhcCCCCCCchh---ccccccc-CC
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH----------VQVGFGRVGTHWWAFQLQGDDIIPDIV---TVGKPMG-NG 156 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----------v~tG~GrtG~~~~~~~~~g~~v~pDi~---~~~K~l~-~G 156 (224)
+..+|++...+.-.|.+.+..++.+.+++. +...|-..+...-..+... -.++++ ++||.+| .|
T Consensus 145 ~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~--~~~~vi~~~S~SK~~g~~G 222 (352)
T PRK03321 145 RTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVR--DHPNVVVLRTFSKAYGLAG 222 (352)
T ss_pred CCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHh--hCCCEEEEecchHHhhhHH
Confidence 445566655556678888776666665542 3333322221001112221 235655 6899998 68
Q ss_pred cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHH
Q psy6205 157 HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEV 199 (224)
Q Consensus 157 ~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~ 199 (224)
+-+|.+++++++++.+... ..++..++++.+++.+.|+.
T Consensus 223 lRiG~~v~~~~~~~~~~~~----~~~~~~s~~~q~~a~~~l~~ 261 (352)
T PRK03321 223 LRVGYAVGHPEVIAALRKV----AVPFSVNSLAQAAAIASLAA 261 (352)
T ss_pred HhhhhhcCCHHHHHHHHHh----cCCCCCCHHHHHHHHHHhcC
Confidence 9999999999999988643 34677889998888888863
No 139
>PRK07480 putative aminotransferase; Validated
Probab=97.15 E-value=0.0006 Score=61.77 Aligned_cols=82 Identities=18% Similarity=0.152 Sum_probs=46.2
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCccc---cchhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATS---EAQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDV 78 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~---~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l 78 (224)
++||.|++|||+|+|+|+||+++..++.++.. ....+....+..+.+..+..+..+-.++.+- +++..++.++.|
T Consensus 365 ~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~l~~~Ppl~i--t~~eid~~~~~l 442 (456)
T PRK07480 365 ADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAVGDRMIISPPLVI--THAEIDELVEKA 442 (456)
T ss_pred hcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeecCCEEEEECCCCC--CHHHHHHHHHHH
Confidence 46899999999999999999877655554321 1122222222233333222232221111111 266677778888
Q ss_pred HHHHHHH
Q psy6205 79 QDLIEAM 85 (224)
Q Consensus 79 ~~~~~~~ 85 (224)
++.+..+
T Consensus 443 ~~al~~~ 449 (456)
T PRK07480 443 RKALDAT 449 (456)
T ss_pred HHHHHHH
Confidence 8777654
No 140
>PRK06917 hypothetical protein; Provisional
Probab=97.15 E-value=0.00078 Score=60.87 Aligned_cols=81 Identities=27% Similarity=0.290 Sum_probs=47.2
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccc---cchhhhccCCCcceeecCC--------CccccCCCCCCCCCChhHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATS---EAQHVITRPPVRMSTEAPC--------PDVYRGKYPADKYPDEDLG 71 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~---~a~~l~~~~~~~~~~~vp~--------P~~yr~~~~~~~~~~~~~~ 71 (224)
+||.|++|||.|+|+++||+.++.++.++.. ....+...+...+.+..+. .+..+...+... +++..
T Consensus 347 ~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~i--t~~ei 424 (447)
T PRK06917 347 QSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTI--TYSEL 424 (447)
T ss_pred cCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCcC--CHHHH
Confidence 5899999999999999999987665555432 2333333333334443332 122221111111 25667
Q ss_pred HHHHHHHHHHHHHH
Q psy6205 72 VKYAQDVQDLIEAM 85 (224)
Q Consensus 72 ~~~~~~l~~~~~~~ 85 (224)
++.++.+++.++.+
T Consensus 425 d~~~~~l~~~l~~~ 438 (447)
T PRK06917 425 DELLSIFAKSVEEM 438 (447)
T ss_pred HHHHHHHHHHHHHH
Confidence 77788888777654
No 141
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=97.15 E-value=0.0067 Score=53.91 Aligned_cols=138 Identities=21% Similarity=0.231 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
++++++.++. ..+++.+|+++.+....|.+.|-++..+.+++. +|+ +|..- +..+.+| +...+
T Consensus 158 ~~~l~~~~~~---~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~-~G~~~---id~~~~g--vD~~~ 228 (406)
T TIGR01814 158 LEDILDTIEK---NGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHA-VGNVP---LDLHDWG--VDFAC 228 (406)
T ss_pred HHHHHHHHHh---cCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccc-cCCcc---cccccCC--CCEEE
Confidence 4556665543 235788999999999999999988888888887 444 44332 2233444 43444
Q ss_pred hcccccccCCcccccceecHHHHHhhhcC--C-cc------c--ccC----------CCCcHHHHHHHHHHHHHHhh---
Q psy6205 147 VTVGKPMGNGHPVAAVITTKEIAKSFQET--G-VE------Y--FNT----------YGGNPVSCAVANAVMEVLET--- 202 (224)
Q Consensus 147 ~~~~K~l~~G~p~~av~~~~~i~~~~~~~--~-~~------~--~~T----------~~~~p~~~aaa~a~l~~~~~--- 202 (224)
.+.-|.|.||.. +++..+++..+.+.+. + .. + ..+ .+-|..++++..++|+++++
T Consensus 229 ~s~hK~l~g~pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~ 307 (406)
T TIGR01814 229 WCTYKYLNAGPG-AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGM 307 (406)
T ss_pred EcCccccCCCCC-eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCH
Confidence 467899876632 4344444433223211 0 00 0 011 12345788888889999955
Q ss_pred hhHHHHHHHHHHHHHHhhhh
Q psy6205 203 ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 203 ~~l~~~~~~~g~~l~~~l~~ 222 (224)
+...++.+++.+++++.|++
T Consensus 308 ~~i~~~~~~l~~~l~~~l~~ 327 (406)
T TIGR01814 308 EALRKKSLLLTDYLEELIKA 327 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 56778889999999988865
No 142
>PRK06149 hypothetical protein; Provisional
Probab=97.12 E-value=0.00056 Score=67.47 Aligned_cols=79 Identities=30% Similarity=0.437 Sum_probs=49.7
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCCC---ccccCCCCCCCCCChhHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPCP---DVYRGKYPADKYPDEDLGVKYAQDVQ 79 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~P---~~yr~~~~~~~~~~~~~~~~~~~~l~ 79 (224)
+||.|++|||+|||+|+||+.+..++.|....+..+..+++..+.+..+.. +..+...+... +++..+..++.|+
T Consensus 888 ~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~~~~vl~~~Ppl~i--t~~~id~~~~~l~ 965 (972)
T PRK06149 888 RHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTGDHLNILKIKPPLCL--DRESADFFVDMLD 965 (972)
T ss_pred hCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecCCCCCEEEEECCCcC--CHHHHHHHHHHHH
Confidence 589999999999999999998777766655444445544444455444432 23332112111 2566677777777
Q ss_pred HHHH
Q psy6205 80 DLIE 83 (224)
Q Consensus 80 ~~~~ 83 (224)
+.+.
T Consensus 966 ~~l~ 969 (972)
T PRK06149 966 RVLT 969 (972)
T ss_pred HHHH
Confidence 7765
No 143
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=97.11 E-value=0.0087 Score=54.34 Aligned_cols=145 Identities=17% Similarity=0.166 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCcccc-ccchhhh----hcCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVG-THWWAFQ----LQGDD 141 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG-~~~~~~~----~~g~~ 141 (224)
+++|++.+.. ..++++.+|+++.-....|-.+.+.+.+++++++ |.=+- |.. ..+|..+ +.+..
T Consensus 163 ~e~Le~~i~~--~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa-~~~e~a~f~~~~e~g~~~~s 239 (460)
T PRK13238 163 LEKLEALIEE--VGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAA-RFAENAYFIKQREPGYKDKS 239 (460)
T ss_pred HHHHHHHHhh--cCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECc-chhhhhhhhhhccccccCCC
Confidence 5677777653 2335788999986555544456668888888887 11110 100 0011111 01100
Q ss_pred C---------CCchhcccccccCC-ccccccee-c-HHHHHhhhcCCc-cc-ccCCCCcHHHHHHHHHH-HH-HHhhhhH
Q psy6205 142 I---------IPDIVTVGKPMGNG-HPVAAVIT-T-KEIAKSFQETGV-EY-FNTYGGNPVSCAVANAV-ME-VLETENL 205 (224)
Q Consensus 142 v---------~pDi~~~~K~l~~G-~p~~av~~-~-~~i~~~~~~~~~-~~-~~T~~~~p~~~aaa~a~-l~-~~~~~~l 205 (224)
+ -.|+++|+ +--.| .|.|++++ + +++++.+..... .+ ..||+|++..+.+|+++ |+ .++++.+
T Consensus 240 i~~i~~~~~s~~D~~~~S-g~K~g~~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~ 318 (460)
T PRK13238 240 IKEIAREMFSYADGLTMS-AKKDAMVNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYL 318 (460)
T ss_pred HHHHhhhhcccCcEEEEe-cccCCCCcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHH
Confidence 0 15665554 11123 35555565 4 577777654311 12 35999998887777764 44 4444444
Q ss_pred HHHHHHHHHHHHHhhhhcC
Q psy6205 206 REHALDVGNQLHTPKKENN 224 (224)
Q Consensus 206 ~~~~~~~g~~l~~~l~~l~ 224 (224)
..+++ .-++|.+.|++.|
T Consensus 319 ~~~~~-~~~~l~~~L~~~G 336 (460)
T PRK13238 319 AYRIG-QVEYLGEGLEEAG 336 (460)
T ss_pred HHHHH-HHHHHHHHHHHCC
Confidence 44444 4488888887654
No 144
>PRK07482 hypothetical protein; Provisional
Probab=97.10 E-value=0.00079 Score=61.07 Aligned_cols=81 Identities=22% Similarity=0.305 Sum_probs=46.1
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCccc---cchhhhccCCCcceeecCC--CccccCCCCCCCCCChhHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATS---EAQHVITRPPVRMSTEAPC--PDVYRGKYPADKYPDEDLGVKYAQ 76 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~---~a~~l~~~~~~~~~~~vp~--P~~yr~~~~~~~~~~~~~~~~~~~ 76 (224)
++||.|++|||.|+|+|+||+++..++.|+.. .+..+.......+.+..+. .+..+...+... +++..++.++
T Consensus 369 ~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~~~~~i~~~Ppl~i--t~~ei~~~~~ 446 (461)
T PRK07482 369 GDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAMPHGDILGFAPPLVL--TRAEADEIVA 446 (461)
T ss_pred hcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecCCCCCEEEEeCCCCC--CHHHHHHHHH
Confidence 46899999999999999999977665555332 1233333333333332222 232222111111 2566677777
Q ss_pred HHHHHHHH
Q psy6205 77 DVQDLIEA 84 (224)
Q Consensus 77 ~l~~~~~~ 84 (224)
.+++.++.
T Consensus 447 ~l~~~l~~ 454 (461)
T PRK07482 447 IAKDAVDE 454 (461)
T ss_pred HHHHHHHH
Confidence 77777754
No 145
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=97.10 E-value=0.012 Score=51.24 Aligned_cols=138 Identities=11% Similarity=0.067 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
++++++.+.. ++ ++..+.+--+....|.+.+.++..+.+++. ++ ++|... +....+ .+|+
T Consensus 117 ~~~l~~~l~~---~~-~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~-~~g~~~---~~~~~~----~~D~ 184 (363)
T TIGR02326 117 VVEVEAILAA---DP-AITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMS-SFGGIP---IDIAEL----HIDY 184 (363)
T ss_pred HHHHHHHHhh---CC-CccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccc-cccCcc---cchhhc----CccE
Confidence 4556665542 22 333343333445578888877777777776 33 244322 122223 3676
Q ss_pred h--cccccccCCcccccceecHHHHHhhhcCCccc----------------ccCCCCcHHHHHHHHHHHHHHhhh----h
Q psy6205 147 V--TVGKPMGNGHPVAAVITTKEIAKSFQETGVEY----------------FNTYGGNPVSCAVANAVMEVLETE----N 204 (224)
Q Consensus 147 ~--~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~----------------~~T~~~~p~~~aaa~a~l~~~~~~----~ 204 (224)
+ +..|.|.|..-+|.++++++..+.+......+ ...|+.++....+..++|+.+.++ +
T Consensus 185 ~~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~ 264 (363)
T TIGR02326 185 LISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAA 264 (363)
T ss_pred EEecCccccccCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHH
Confidence 6 57899976544688999998877653211000 123456777888888888887543 4
Q ss_pred HHHHHHHHHHHHHHhhhhcC
Q psy6205 205 LREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 205 l~~~~~~~g~~l~~~l~~l~ 224 (224)
..++.+++.++|++.|+++|
T Consensus 265 ~~~~~~~~~~~l~~~L~~~g 284 (363)
T TIGR02326 265 RHQRYQQNQKTLVAGMRALG 284 (363)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 66788899999999987653
No 146
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=97.07 E-value=0.004 Score=53.84 Aligned_cols=125 Identities=17% Similarity=0.183 Sum_probs=79.7
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH----------HHhCCccccccchhhhhcCCCCCCchh---ccccccc-C
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH----------VQVGFGRVGTHWWAFQLQGDDIIPDIV---TVGKPMG-N 155 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----------v~tG~GrtG~~~~~~~~~g~~v~pDi~---~~~K~l~-~ 155 (224)
+++.+|++.......|.+.+.+++.+.++.. ++..|...+. ... ... ..++++ +++|.+| .
T Consensus 141 ~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~-~~~--~~~--~~~~~i~~~S~sK~~g~~ 215 (346)
T TIGR01141 141 DKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPS-TLP--LLA--EYPNLIVLRTLSKAFGLA 215 (346)
T ss_pred CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCcc-HHH--HHh--hCCCEEEEehhhHhhhch
Confidence 3567777765566688887766655555432 5554432221 111 111 224544 6899996 4
Q ss_pred CcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 156 GHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 156 G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+.+|++++++++.+.+... ..+++.++++.+++.+.++... -....++++++-+++++.|+++
T Consensus 216 G~r~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 280 (346)
T TIGR01141 216 GLRIGYAIANAEIIDALNKV----RAPFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKL 280 (346)
T ss_pred hhhceeeecCHHHHHHHHhc----cCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 78899999999999887643 2356678888888888776543 2345666777777777777654
No 147
>PRK07036 hypothetical protein; Provisional
Probab=97.07 E-value=0.0009 Score=60.80 Aligned_cols=81 Identities=22% Similarity=0.142 Sum_probs=44.9
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCccc---cchhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATS---EAQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDV 78 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~---~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l 78 (224)
++||.|++|||.|+|+|+||+.++.++.++.. .+..+...+...+.+..+..+..+..++... +++..++.++.+
T Consensus 369 ~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~l~Ppl~i--t~~~id~~~~~l 446 (466)
T PRK07036 369 RELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLEHLCVLSPPLII--TRAQIDEIVAIL 446 (466)
T ss_pred ccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeecCCEEEEeCCCcC--CHHHHHHHHHHH
Confidence 46899999999999999999987665544321 2233333333334433332232221111111 255566666666
Q ss_pred HHHHHH
Q psy6205 79 QDLIEA 84 (224)
Q Consensus 79 ~~~~~~ 84 (224)
++.++.
T Consensus 447 ~~al~~ 452 (466)
T PRK07036 447 RAAIEE 452 (466)
T ss_pred HHHHHH
Confidence 666654
No 148
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=97.07 E-value=0.0086 Score=52.25 Aligned_cols=125 Identities=14% Similarity=0.100 Sum_probs=78.7
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-------HHhCCccccccchhhhhcCCCCCCchhccc--ccccCCccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG--KPMGNGHPVAA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~--K~l~~G~p~~a 161 (224)
++.+|++.-+....|.+.+.+++.+.+++. ...++|... +... . ..+|+++++ |.+++ ..+|.
T Consensus 139 ~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~---~~~~--~--~~~d~~~~s~~K~~~~-~g~g~ 210 (373)
T cd06453 139 RTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMP---VDVQ--D--LGCDFLAFSGHKMLGP-TGIGV 210 (373)
T ss_pred CceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCcee---eecc--c--cCCCEEEeccccccCC-CCcEE
Confidence 567788776666678888877777777766 111222211 1111 1 448999888 99986 45688
Q ss_pred ceecHHHHHhhhcCCcc---------c----------ccCCCCcHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHh
Q psy6205 162 VITTKEIAKSFQETGVE---------Y----------FNTYGGNPVSCAVANAVMEVLETE---NLREHALDVGNQLHTP 219 (224)
Q Consensus 162 v~~~~~i~~~~~~~~~~---------~----------~~T~~~~p~~~aaa~a~l~~~~~~---~l~~~~~~~g~~l~~~ 219 (224)
+++++++.+.+...... . +.+.+.|..+..+..++++.++++ .+.++.+++.+++.+.
T Consensus 211 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~ 290 (373)
T cd06453 211 LYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALER 290 (373)
T ss_pred EEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 88999988776532100 0 001123444555666678877653 5677788888999888
Q ss_pred hhhc
Q psy6205 220 KKEN 223 (224)
Q Consensus 220 l~~l 223 (224)
|+++
T Consensus 291 l~~~ 294 (373)
T cd06453 291 LSEI 294 (373)
T ss_pred HhcC
Confidence 8765
No 149
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=97.04 E-value=0.00098 Score=60.19 Aligned_cols=81 Identities=22% Similarity=0.273 Sum_probs=47.9
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCC-CccccCCCCCCCCCChhHHHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPC-PDVYRGKYPADKYPDEDLGVKYAQDVQDL 81 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~-P~~yr~~~~~~~~~~~~~~~~~~~~l~~~ 81 (224)
+||.|++|||.|+|+|+|++.+..+..+....+..+....+..+++..+. ++..|...+... +++..+..++.+++.
T Consensus 349 ~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~~lr~~p~l~~--t~~~id~~~~~l~~~ 426 (445)
T PRK08593 349 KYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAVAGNVLRFQPPLVI--TYEQLDTALNTIEQA 426 (445)
T ss_pred cCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEeccCCCEEEEECCCcc--CHHHHHHHHHHHHHH
Confidence 58999999999999999998765544443333333443333334433221 233332222111 266777778888887
Q ss_pred HHHH
Q psy6205 82 IEAM 85 (224)
Q Consensus 82 ~~~~ 85 (224)
++.+
T Consensus 427 l~~~ 430 (445)
T PRK08593 427 FTAL 430 (445)
T ss_pred HHHH
Confidence 7765
No 150
>PRK06062 hypothetical protein; Provisional
Probab=97.03 E-value=0.001 Score=60.12 Aligned_cols=81 Identities=22% Similarity=0.229 Sum_probs=46.5
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccc------cchhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATS------EAQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQ 76 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~------~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~ 76 (224)
+||.|++|||.|+|+|+|+++++.++.|... .+..+.......+.+..+..+..|-..+... +++..++.++
T Consensus 360 ~~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~~~~~lrl~ppl~~--t~~eid~~~~ 437 (451)
T PRK06062 360 RHPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFVNGNRIHVVPPCTV--TEDEVREGLA 437 (451)
T ss_pred cCCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEeecCCEEEEECCccC--CHHHHHHHHH
Confidence 4899999999999999999876554444322 1223333333334433333333222111111 2666777788
Q ss_pred HHHHHHHHH
Q psy6205 77 DVQDLIEAM 85 (224)
Q Consensus 77 ~l~~~~~~~ 85 (224)
.+++.++.+
T Consensus 438 ~l~~~l~~~ 446 (451)
T PRK06062 438 ILDAALAVA 446 (451)
T ss_pred HHHHHHHHh
Confidence 888777654
No 151
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=97.01 E-value=0.0052 Score=53.48 Aligned_cols=103 Identities=14% Similarity=0.064 Sum_probs=63.1
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH----------HHhCCccccccchhhhhcCCCCCCchh--ccccccc-CCc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH----------VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMG-NGH 157 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----------v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~-~G~ 157 (224)
++.++++...+.-.|.+.+.++..+.++.. +...|-..+.......... .....++ ++||.+| .|+
T Consensus 151 ~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~vi~~~S~SK~~g~~Gl 229 (359)
T PRK03158 151 QTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLE-KYENLIVLRTFSKAYGLAAL 229 (359)
T ss_pred CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHH-hcCCEEEEEechHhhcCcch
Confidence 455667665577789888877655555442 2222200000000001111 0111233 7999998 689
Q ss_pred ccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHH
Q psy6205 158 PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVME 198 (224)
Q Consensus 158 p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~ 198 (224)
.+|.+++++++.+.+... ..++..|+++.+++.++|+
T Consensus 230 RiG~~v~~~~~~~~~~~~----~~~~~~~~~~q~~~~~~l~ 266 (359)
T PRK03158 230 RVGYGIASEELIEKLNIA----RPPFNTTRIAQYAAIAALE 266 (359)
T ss_pred hhehhcCCHHHHHHHHHh----cCCCCCCHHHHHHHHHHhc
Confidence 999999999999888643 2357789999999988885
No 152
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=96.99 E-value=0.011 Score=51.49 Aligned_cols=136 Identities=20% Similarity=0.213 Sum_probs=77.4
Q ss_pred HHHHHHHHHHHccCCCCceEEE-EccccCCCCcccCCHHHHHHHHHH--------HHhCC----ccccccchhhhhcCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFF-AESLQSCGGQIIPPANYLREVYKH--------VQVGF----GRVGTHWWAFQLQGDD 141 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi-~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~----GrtG~~~~~~~~~g~~ 141 (224)
.++|++.+. ++..+|+ +.+ ....|.+.|.++..+.+++. .++++ .+.+. .+.....+
T Consensus 141 ~~~l~~~i~------~~~~~vi~~~~-~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~-~~~~~~~~-- 210 (371)
T PRK13520 141 VKAVEDLID------DNTIGIVGIAG-TTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPP-NFDFSLPG-- 210 (371)
T ss_pred HHHHHHHHh------hCCEEEEEEcC-CcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCC-CccccCCC--
Confidence 455555553 1233444 333 34578888877777777775 44433 12221 12221122
Q ss_pred CCCchhcc--cccccCCccccccee-cHHHHHhhhcCC-c-------ccccCCCCcHHHHHHHHHHHHHHhhh---hHHH
Q psy6205 142 IIPDIVTV--GKPMGNGHPVAAVIT-TKEIAKSFQETG-V-------EYFNTYGGNPVSCAVANAVMEVLETE---NLRE 207 (224)
Q Consensus 142 v~pDi~~~--~K~l~~G~p~~av~~-~~~i~~~~~~~~-~-------~~~~T~~~~p~~~aaa~a~l~~~~~~---~l~~ 207 (224)
.|.+++ -|-+.+|.|+|+++. ++++.+.+.... . .+.+|.. +..++++.++|+.+.++ ++.+
T Consensus 211 --vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~--~~~~~~~~~al~~l~~~g~~~~~~ 286 (371)
T PRK13520 211 --VDSITIDPHKMGLAPIPAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRS--GAGVAATYAVMKYLGREGYRKVVE 286 (371)
T ss_pred --CceEEECCccccCccCCceEEEEcCHHHHHhhcccCccccCCCCcceEeecc--ChHHHHHHHHHhhhcHhHHHHHHH
Confidence 354443 354334578887886 555776653211 0 0112333 34588888899988654 4788
Q ss_pred HHHHHHHHHHHhhhhcC
Q psy6205 208 HALDVGNQLHTPKKENN 224 (224)
Q Consensus 208 ~~~~~g~~l~~~l~~l~ 224 (224)
+..++.++|.++|+++|
T Consensus 287 ~~~~~~~~l~~~L~~~g 303 (371)
T PRK13520 287 RCMENTRWLAEELKERG 303 (371)
T ss_pred HHHHHHHHHHHHHHhCC
Confidence 89999999999998653
No 153
>PRK07777 aminotransferase; Validated
Probab=96.97 E-value=0.008 Score=52.94 Aligned_cols=129 Identities=14% Similarity=0.154 Sum_probs=71.9
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCC-c--hhccccccc-
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIP-D--IVTVGKPMG- 154 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~p-D--i~~~~K~l~- 154 (224)
++.+|++...+...|... +++.++.+.++ +...|.-.+........+. +... + +.+++|.+|
T Consensus 159 ~~~~v~l~~p~NPtG~~~-~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~g~ 236 (387)
T PRK07777 159 RTRALIVNSPHNPTGTVL-TAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLP-GMRERTVTISSAAKTFNV 236 (387)
T ss_pred ccEEEEEcCCCCCCCccC-CHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCC-CCcCcEEEEeechhhccC
Confidence 456777776666677755 55566666555 3333311111001111111 0111 2 336999998
Q ss_pred CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 155 NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 155 ~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~~l~~l 223 (224)
.|+.+|++++++++.+.+... ....++..++....++...|+.-+ .+.+.+++++..+++.+.|+++
T Consensus 237 ~GlRiG~~~~~~~l~~~~~~~--~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 305 (387)
T PRK07777 237 TGWKIGWACGPAPLIAAVRAA--KQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEA 305 (387)
T ss_pred cCceeEEEecCHHHHHHHHHH--HhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 689999999999998877643 222345444444444444443211 1345667778888888887754
No 154
>PRK06148 hypothetical protein; Provisional
Probab=96.93 E-value=0.00093 Score=66.13 Aligned_cols=80 Identities=35% Similarity=0.452 Sum_probs=50.6
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCC---CccccCCCCCCCCCChhHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPC---PDVYRGKYPADKYPDEDLGVKYAQDVQ 79 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~---P~~yr~~~~~~~~~~~~~~~~~~~~l~ 79 (224)
+||.|++|||.|||.|+||+.+..++.|....+..+...+...+++..+. .+..|...+... +++..++.++.|+
T Consensus 928 ~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~~~vlr~~Ppl~i--t~~~id~~l~~l~ 1005 (1013)
T PRK06148 928 RFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEGPHDNVLKIRPPLIF--SRADADHLLEVLD 1005 (1013)
T ss_pred hCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccCCCCCEEEEeCCccC--CHHHHHHHHHHHH
Confidence 58999999999999999999877776665544444555544445544332 132222222111 2566777778787
Q ss_pred HHHHH
Q psy6205 80 DLIEA 84 (224)
Q Consensus 80 ~~~~~ 84 (224)
+.+..
T Consensus 1006 ~~l~~ 1010 (1013)
T PRK06148 1006 DVLAA 1010 (1013)
T ss_pred HHHHH
Confidence 77754
No 155
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=96.93 E-value=0.0054 Score=54.92 Aligned_cols=134 Identities=19% Similarity=0.107 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHccCCCCceEEEE-ccccCCCCcccCCHHHHHHHHHH-------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFA-ESLQSCGGQIIPPANYLREVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~-Epv~~~~G~~~~~~~~l~~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
.+++++.++. . +..+|++ +++.|+.+ +-+++.+.+++. -..++|-++. ......++ ..|+
T Consensus 157 ~~~le~~l~~---~--~~klVi~~~~~~g~~~---dl~~l~~la~~~g~~livD~Aha~G~~~~-g~~~~~~~---~~Di 224 (416)
T PRK13034 157 YDEVEELAKE---H--KPKLIIAGFSAYPREL---DFARFREIADEVGALLMVDMAHIAGLVAA-GEHPNPFP---HAHV 224 (416)
T ss_pred HHHHHHHHhh---c--CCeEEEECCCcccccc---CHHHHHHHHHHcCCEEEEeCcccccCccc-CCCCCCCC---CceE
Confidence 4556665542 1 3457777 57766443 444455555554 2233444442 11111111 2676
Q ss_pred h--cccccccCCcccccceecHH-HHHhhhcCCcccccCC---CCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHH
Q psy6205 147 V--TVGKPMGNGHPVAAVITTKE-IAKSFQETGVEYFNTY---GGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHT 218 (224)
Q Consensus 147 ~--~~~K~l~~G~p~~av~~~~~-i~~~~~~~~~~~~~T~---~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~ 218 (224)
+ +++|.|+|+. -|+++++++ +.+.+... .++++ .-.|..++++++.+++++. +++.++++++.++|++
T Consensus 225 ~~~s~~K~l~g~~-GG~v~~~~~~~~~~~~~~---~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~ 300 (416)
T PRK13034 225 VTTTTHKTLRGPR-GGMILTNDEEIAKKINSA---VFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAE 300 (416)
T ss_pred EEEeCcccCCCCC-CeEEEECcHHHHHHHHhh---cCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHH
Confidence 6 5679995432 133566554 44433321 12221 2233445555566666633 4568999999999999
Q ss_pred hhhhcC
Q psy6205 219 PKKENN 224 (224)
Q Consensus 219 ~l~~l~ 224 (224)
+|+++|
T Consensus 301 ~L~~~G 306 (416)
T PRK13034 301 VLKERG 306 (416)
T ss_pred HHHHcC
Confidence 998764
No 156
>PRK07481 hypothetical protein; Provisional
Probab=96.92 E-value=0.0013 Score=59.48 Aligned_cols=80 Identities=21% Similarity=0.256 Sum_probs=45.3
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCcc---ccchhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPAT---SEAQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQ 79 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~---~~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~ 79 (224)
+||.|++|||+|+|+|+||+.+..++.+.. .....+...+...+.+..+..+..+-..+... +++..++.++.++
T Consensus 363 ~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~~i~l~Ppl~i--t~~eid~~~~~l~ 440 (449)
T PRK07481 363 RFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPSGTKIILSPPLVI--QREDVDRIVDALD 440 (449)
T ss_pred cCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEecCCEEEEECCCCC--CHHHHHHHHHHHH
Confidence 489999999999999999987655554432 12233333333334444333222221111111 2566677777777
Q ss_pred HHHHH
Q psy6205 80 DLIEA 84 (224)
Q Consensus 80 ~~~~~ 84 (224)
+.++.
T Consensus 441 ~~l~~ 445 (449)
T PRK07481 441 AGLSA 445 (449)
T ss_pred HHHHh
Confidence 77654
No 157
>PRK07678 aminotransferase; Validated
Probab=96.90 E-value=0.0012 Score=59.79 Aligned_cols=81 Identities=25% Similarity=0.327 Sum_probs=46.0
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCcc-ccchhhhccCCCcceeecCCC-------ccccCCCCCCCCCChhHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPAT-SEAQHVITRPPVRMSTEAPCP-------DVYRGKYPADKYPDEDLGVK 73 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~-~~a~~l~~~~~~~~~~~vp~P-------~~yr~~~~~~~~~~~~~~~~ 73 (224)
++||.|++|||.|+|+++|++.+..+..|.. ..+..+.......+.+..+.+ +..|...+... +++..++
T Consensus 361 ~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~i--t~~eid~ 438 (451)
T PRK07678 361 GEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVI--SSEEIAF 438 (451)
T ss_pred hcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECCCcC--CHHHHHH
Confidence 4689999999999999999997665544432 223333333333344332211 22222111111 2566777
Q ss_pred HHHHHHHHHHH
Q psy6205 74 YAQDVQDLIEA 84 (224)
Q Consensus 74 ~~~~l~~~~~~ 84 (224)
.++.+++.++.
T Consensus 439 ~~~~l~~~l~~ 449 (451)
T PRK07678 439 IVGTLKTALER 449 (451)
T ss_pred HHHHHHHHHHh
Confidence 77777777654
No 158
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=96.90 E-value=0.0095 Score=51.69 Aligned_cols=142 Identities=17% Similarity=0.196 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHH---HHHH--------HHhCCcccccc-chh-hhhcCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLRE---VYKH--------VQVGFGRVGTH-WWA-FQLQGDD 141 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~---~~~~--------v~tG~GrtG~~-~~~-~~~~g~~ 141 (224)
.++|++.+++......+..++++.......|...+.++..+. +++. +...+ ..+.. ++. .....
T Consensus 132 ~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~-~~~~~~~~~~~~~~~-- 208 (363)
T PF00155_consen 132 PEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDL-IFGDPDFGPIRSLLD-- 208 (363)
T ss_dssp HHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTG-BSSSSHTHHHHGHHT--
T ss_pred ccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeeceecc-ccCCCccCccccccc--
Confidence 456666665421111135677777666667875555444333 3332 43333 22211 111 12222
Q ss_pred CCCc-hh--ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-----hhhHHHHHHHH
Q psy6205 142 IIPD-IV--TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-----TENLREHALDV 212 (224)
Q Consensus 142 v~pD-i~--~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-----~~~l~~~~~~~ 212 (224)
-.++ |+ +++|.+| .|+.+|++++++++.+.+... ..++..+....+++.+.+.--. -+...+++++.
T Consensus 209 ~~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~ 284 (363)
T PF00155_consen 209 EDDNVIVVGSLSKSFGLPGLRVGYIVAPPELIERLRRF----QRSGLSSSPMQAAAAAALSDPELVEKWLEELRERLREN 284 (363)
T ss_dssp TTSTEEEEEESTTTTTSGGGTEEEEEEEHHHHHHHHHH----HHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccceeeeeccccccccccccccccchhhhhhhhhhc----cccccccchhhHHHHHhhhcccccccccccchhhHHHH
Confidence 3344 33 5899998 589999999999999988643 2233336666666655555443 14566777788
Q ss_pred HHHHHHhhhhc
Q psy6205 213 GNQLHTPKKEN 223 (224)
Q Consensus 213 g~~l~~~l~~l 223 (224)
-+++.+.|++.
T Consensus 285 ~~~l~~~L~~~ 295 (363)
T PF00155_consen 285 RDLLREALEEI 295 (363)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 88888888654
No 159
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=96.87 E-value=0.0014 Score=59.09 Aligned_cols=80 Identities=23% Similarity=0.239 Sum_probs=43.5
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCC------ccccchhhhccCCCcceeecCC---CccccCCCCCCCCCChhHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTP------ATSEAQHVITRPPVRMSTEAPC---PDVYRGKYPADKYPDEDLGVK 73 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p------~~~~a~~l~~~~~~~~~~~vp~---P~~yr~~~~~~~~~~~~~~~~ 73 (224)
+||.|++|||+|||+|+||++++.++.+ ....+..+....+..+.+..+. .++.|-..+... +++..++
T Consensus 347 ~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~i--t~~ei~~ 424 (442)
T TIGR00709 347 EHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVFRLLCPITI--DQEECEE 424 (442)
T ss_pred hCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCCC--CHHHHHH
Confidence 5899999999999999999876544321 1112233333333333333222 222221111111 2566677
Q ss_pred HHHHHHHHHHH
Q psy6205 74 YAQDVQDLIEA 84 (224)
Q Consensus 74 ~~~~l~~~~~~ 84 (224)
.++.+++.+..
T Consensus 425 ~~~~l~~~l~~ 435 (442)
T TIGR00709 425 GISRFKQAVEE 435 (442)
T ss_pred HHHHHHHHHHH
Confidence 77777776654
No 160
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=96.85 E-value=0.0017 Score=58.58 Aligned_cols=81 Identities=32% Similarity=0.364 Sum_probs=48.3
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecC-CCccccCCCCCCCCCChhHHHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAP-CPDVYRGKYPADKYPDEDLGVKYAQDVQDL 81 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp-~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~ 81 (224)
+||.|++|||+|+|.|+||+.+..++.+....+..+..+....+.+..+ ..+..|...+... +++..++.++.+++.
T Consensus 346 ~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~~~lr~~P~l~~--t~~~id~~~~~l~~~ 423 (443)
T PRK08360 346 KHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFFSGNVLRIQPPLTI--EKEVLDEGLDILEEA 423 (443)
T ss_pred hCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeecCCCEEEEeCCCCC--CHHHHHHHHHHHHHH
Confidence 4888999999999999999876655544333333343333333433322 1244343222221 366677778888887
Q ss_pred HHHH
Q psy6205 82 IEAM 85 (224)
Q Consensus 82 ~~~~ 85 (224)
++.+
T Consensus 424 l~~~ 427 (443)
T PRK08360 424 IEDV 427 (443)
T ss_pred HHHH
Confidence 7765
No 161
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=96.84 E-value=0.0016 Score=59.73 Aligned_cols=82 Identities=18% Similarity=0.166 Sum_probs=44.8
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCccc---cchhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATS---EAQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDV 78 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~---~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l 78 (224)
++||.|++|||.|+|+|+|++.+..+..++.. .+..+.......+.+..+..+..|-..+.+. +++..++.++.+
T Consensus 408 ~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~lrl~Ppl~i--t~eeid~~~~~l 485 (504)
T PLN02760 408 SGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAGDNIMMSPPLII--TPEEVDELISIY 485 (504)
T ss_pred hcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEecCCEEEEECCCCC--CHHHHHHHHHHH
Confidence 35899999999999999999876655544321 1222333333334433332232221111111 256666666666
Q ss_pred HHHHHHH
Q psy6205 79 QDLIEAM 85 (224)
Q Consensus 79 ~~~~~~~ 85 (224)
++.++.+
T Consensus 486 ~~al~~~ 492 (504)
T PLN02760 486 GKALKAT 492 (504)
T ss_pred HHHHHHH
Confidence 6666543
No 162
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=96.82 E-value=0.014 Score=50.30 Aligned_cols=72 Identities=14% Similarity=0.140 Sum_probs=51.3
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++|.+| .|+.+|++++++++++.+... ..++..++++.+++.+.|+.-+ ..+..++++++-+++.+.|+++
T Consensus 191 S~SK~~g~~G~R~G~i~~~~~~~~~l~~~----~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 264 (330)
T TIGR01140 191 SLTKFFGLAGLRLGFVVAHPALLARLREA----LGPWTVNGPARAAGRAALADTAWQAATRARLAAERARLAALLARL 264 (330)
T ss_pred ecchhhcCchhhhhheeCCHHHHHHHHhc----CCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 7999999 789999999999999988643 2356667777777766665211 1234566777777777777654
No 163
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=96.81 E-value=0.0016 Score=59.03 Aligned_cols=79 Identities=14% Similarity=0.070 Sum_probs=44.2
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDL 81 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~ 81 (224)
++||.|+||||+|+|+|+||+.+..+. ...+..+.......+.+..+..+..|...+... +++..++.++.|++.
T Consensus 369 ~~~~~v~~vrG~Gl~~gvel~~~~~~~---~~~~~~i~~~~~~~Gll~~~~g~~l~~~Ppl~i--t~~eid~~~~~l~~a 443 (453)
T PRK06943 369 AAHPQVRHLRQRGTIFAFDVALDGDAA---RTFSRRFFEAALERELLLRPIGTTVYLMPPYVL--DDDEIAWLAERTRAT 443 (453)
T ss_pred hcCCCEEeEeccccEEEEEEccCCCcc---hHHHHHHHHHHHHCCcEEEecCCEEEEeCCCcC--CHHHHHHHHHHHHHH
Confidence 458899999999999999998653221 122223333333334433333233322211111 266677777778777
Q ss_pred HHHH
Q psy6205 82 IEAM 85 (224)
Q Consensus 82 ~~~~ 85 (224)
++.+
T Consensus 444 l~~~ 447 (453)
T PRK06943 444 LDAT 447 (453)
T ss_pred HHHH
Confidence 7654
No 164
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=96.73 E-value=0.023 Score=50.05 Aligned_cols=123 Identities=13% Similarity=0.015 Sum_probs=76.4
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchh--cccccccCCcccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGNGHPVA 160 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~G~p~~ 160 (224)
+..+|+++-+....|.+.+.++..+.+++. ++. .| ... .....+ .+|++ ++.|.+| .++|
T Consensus 156 ~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~-~~-~~~--~~~~~~----~~d~~~~s~~K~~g--~~~G 225 (397)
T TIGR01976 156 RTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHY-AP-HGL--IDVQAT----GADFLTCSAYKFFG--PHMG 225 (397)
T ss_pred CceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhh-cc-ccC--CCHHHc----CCCEEEEechhhcC--CceE
Confidence 467788887778889888877777777765 442 22 111 122223 36866 5688874 4578
Q ss_pred cceecHHHHHhhhcCCcccc-c-------CCCCcHHHHHHHHHHHHHHhhh-----------------hHHHHHHHHHHH
Q psy6205 161 AVITTKEIAKSFQETGVEYF-N-------TYGGNPVSCAVANAVMEVLETE-----------------NLREHALDVGNQ 215 (224)
Q Consensus 161 av~~~~~i~~~~~~~~~~~~-~-------T~~~~p~~~aaa~a~l~~~~~~-----------------~l~~~~~~~g~~ 215 (224)
.+++++++.+.+......+. . +-+-|....++..++++.+.+. ...++..++.++
T Consensus 226 ~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 305 (397)
T TIGR01976 226 ILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEY 305 (397)
T ss_pred EEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHH
Confidence 89999999887654211110 1 1123445666666777777432 245666778888
Q ss_pred HHHhhhhc
Q psy6205 216 LHTPKKEN 223 (224)
Q Consensus 216 l~~~l~~l 223 (224)
|++.|+++
T Consensus 306 l~~~L~~~ 313 (397)
T TIGR01976 306 LLVGLSDL 313 (397)
T ss_pred HHHHHhcC
Confidence 88888765
No 165
>PRK12403 putative aminotransferase; Provisional
Probab=96.72 E-value=0.0024 Score=57.95 Aligned_cols=82 Identities=12% Similarity=0.053 Sum_probs=44.6
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCcccc---chhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATSE---AQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDV 78 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~---a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l 78 (224)
++||.|+||||+|+|+|+||+.+..++.+.... ..++.......+.+..+..+..+..++.+ -+++..++.++-+
T Consensus 369 ~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~l~Ppl~--it~~eid~~~~~l 446 (460)
T PRK12403 369 GDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRSTLGRMIMAPALV--AGRAEIDELVDKT 446 (460)
T ss_pred hcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEecCCEEEEECCCC--CCHHHHHHHHHHH
Confidence 458999999999999999998766555543321 11111111222332222211111111111 1266677777888
Q ss_pred HHHHHHH
Q psy6205 79 QDLIEAM 85 (224)
Q Consensus 79 ~~~~~~~ 85 (224)
++.+..+
T Consensus 447 ~~al~~~ 453 (460)
T PRK12403 447 RIAVDRT 453 (460)
T ss_pred HHHHHHH
Confidence 8777654
No 166
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=96.68 E-value=0.0081 Score=53.07 Aligned_cols=119 Identities=16% Similarity=0.106 Sum_probs=72.1
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchhc--ccccccC-Cccc-cc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN-GHPV-AA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~-G~p~-~a 161 (224)
+..+|++|......|.+.+.++..+.+++. |-.-++ ++ +...... ..+|+++ ++|.++| |..+ |+
T Consensus 139 ~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD~a~~-~~---~~~~pl~--~g~Divv~S~sK~l~g~g~~~gG~ 212 (380)
T TIGR01325 139 NTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVDNVFA-TP---VLQQPLK--LGADVVVYSATKHIDGQGRVMGGV 212 (380)
T ss_pred CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCc-cc---ccCCchh--hCCCEEEeeccceecCCCCeEEEE
Confidence 578999998877778777766666666665 100010 11 1111122 4479886 8999987 5554 77
Q ss_pred ceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHH
Q psy6205 162 VITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLH 217 (224)
Q Consensus 162 v~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~ 217 (224)
+++++++.+.+......+ ....+|..++.++..++.+.. +...+++.++.++|.
T Consensus 213 vv~~~~~~~~l~~~~~~~--g~~~~p~~a~~~l~~l~tl~~r~~~~~~~a~~la~~L~ 268 (380)
T TIGR01325 213 IAGSEELMAEVAVYLRHT--GPAMSPFNAWVLLKGLETLSLRMQKQFDSALAIAEWLQ 268 (380)
T ss_pred EEeCHHHHHHHHHHHHhh--CCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHH
Confidence 788888887765431122 223467777777777777743 344555555555554
No 167
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=96.64 E-value=0.024 Score=51.24 Aligned_cols=138 Identities=12% Similarity=0.103 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-------HHhCCccccccchhhhhcCCCCCCchh
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDIV 147 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi~ 147 (224)
.++|+++++. ...+ .+++. .+..|.+.+-++.-+.+++. ...++|..+...+.. .. -..|++
T Consensus 171 ~~~L~~~l~~---~~~~--lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~-~~---~~~D~l 239 (452)
T PTZ00094 171 YDKLEELAKA---FRPK--LIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPS-PF---PYADVV 239 (452)
T ss_pred HHHHHHHHHH---hCCC--EEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCC-CC---CCCcEE
Confidence 4666666642 1122 23331 23456677766666666665 223355443211110 11 136887
Q ss_pred cc--cccccCCcccccceecHHHHHhhhcCC-cccccCC--CCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHh
Q psy6205 148 TV--GKPMGNGHPVAAVITTKEIAKSFQETG-VEYFNTY--GGNPVSCAVANAVMEVLET---ENLREHALDVGNQLHTP 219 (224)
Q Consensus 148 ~~--~K~l~~G~p~~av~~~~~i~~~~~~~~-~~~~~T~--~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~~~ 219 (224)
++ .|.|.|-. -|.+++++++.+.+.... ...+.+| +.++..+++..++|+.+.+ +.+.+++.++.++|.+.
T Consensus 240 ~~S~hK~l~GP~-Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~ 318 (452)
T PTZ00094 240 TTTTHKSLRGPR-SGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAA 318 (452)
T ss_pred EcCCccCCCCCC-ceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH
Confidence 65 59885422 133566666544332211 0111222 4567788888899999953 35788999999999999
Q ss_pred hhhcC
Q psy6205 220 KKENN 224 (224)
Q Consensus 220 l~~l~ 224 (224)
|++.|
T Consensus 319 L~~~g 323 (452)
T PTZ00094 319 LEKRG 323 (452)
T ss_pred HHhCC
Confidence 97643
No 168
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=96.63 E-value=0.0025 Score=57.84 Aligned_cols=25 Identities=52% Similarity=0.969 Sum_probs=21.8
Q ss_pred CCCcceeeccCCceeEEEEeecCCC
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQ 27 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t 27 (224)
+||.|+||||.|||+|+||++++.+
T Consensus 372 ~~~~i~~VrG~Glm~gie~~~~~~~ 396 (464)
T PRK06938 372 DYPQLGDVRGRGLMLGVEIVDPQGE 396 (464)
T ss_pred hCCCeeeeeccceEEEEEeccCccc
Confidence 5899999999999999999876544
No 169
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=96.62 E-value=0.051 Score=47.37 Aligned_cols=139 Identities=12% Similarity=0.058 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-------HHhCCccccccchhhhhcCCCCCCchh
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDIV 147 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi~ 147 (224)
.+++++.+.. + .++..|.+--.....|.+.|.++..+.+++. -...||... ..... ..+|++
T Consensus 119 ~~~l~~~l~~---~-~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~---~~~~~----~~~d~~ 187 (368)
T PRK13479 119 AAEVEAALAA---D-PRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIP---IDIAE----LGIDAL 187 (368)
T ss_pred HHHHHHHHHh---C-CCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCcc---ccccc----cCceEE
Confidence 4555555542 2 2343444434444567788877777777766 111233211 11111 236765
Q ss_pred --cccccccCCcccccceecHHHHHhhhcCCcc---------------cccCCCCcHHHHHHHHHHHHHHhh----hhHH
Q psy6205 148 --TVGKPMGNGHPVAAVITTKEIAKSFQETGVE---------------YFNTYGGNPVSCAVANAVMEVLET----ENLR 206 (224)
Q Consensus 148 --~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~---------------~~~T~~~~p~~~aaa~a~l~~~~~----~~l~ 206 (224)
...|.+.|..-+|.+++++++.+.+...... ....|+.|..+.++..++++.+.+ ++..
T Consensus 188 v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~ 267 (368)
T PRK13479 188 ISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARG 267 (368)
T ss_pred EecCccccccCCCceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHH
Confidence 5789886543468899999998876542111 011245677777788888887743 3556
Q ss_pred HHHHHHHHHHHHhhhhcC
Q psy6205 207 EHALDVGNQLHTPKKENN 224 (224)
Q Consensus 207 ~~~~~~g~~l~~~l~~l~ 224 (224)
++++++.++|++.|+++|
T Consensus 268 ~~~~~~~~~l~~~L~~~g 285 (368)
T PRK13479 268 ARYANNQRTLVAGMRALG 285 (368)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 778888888888887753
No 170
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=96.60 E-value=0.0029 Score=57.43 Aligned_cols=81 Identities=26% Similarity=0.289 Sum_probs=43.9
Q ss_pred CCCcceeeccCCceeEEEEeecCCCC-----CCcc-ccchhhhccCCCcceeecCC---CccccCCCCCCCCCChhHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQK-----TPAT-SEAQHVITRPPVRMSTEAPC---PDVYRGKYPADKYPDEDLGVK 73 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~-----~p~~-~~a~~l~~~~~~~~~~~vp~---P~~yr~~~~~~~~~~~~~~~~ 73 (224)
+||.|++|||.|||+|+||++++.+. .+.. ..+..+...++..+.+..+. ++..|...+... +++..++
T Consensus 366 ~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~i--t~~eid~ 443 (459)
T PRK06931 366 RYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRNGNVVRLLPPLLI--TQAECEE 443 (459)
T ss_pred hCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCCc--CHHHHHH
Confidence 58999999999999999998765432 1111 12222332222233333222 122221111111 2667777
Q ss_pred HHHHHHHHHHHH
Q psy6205 74 YAQDVQDLIEAM 85 (224)
Q Consensus 74 ~~~~l~~~~~~~ 85 (224)
.++.+++.+..+
T Consensus 444 ~~~~l~~~l~~~ 455 (459)
T PRK06931 444 FIDRFEQALLAA 455 (459)
T ss_pred HHHHHHHHHHHH
Confidence 788888777643
No 171
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=96.58 E-value=0.0025 Score=61.57 Aligned_cols=26 Identities=19% Similarity=0.284 Sum_probs=22.9
Q ss_pred CCCCcceeeccCCceeEEEEeecCCC
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQ 27 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t 27 (224)
.+||.|+||||+|+|+||||+++..+
T Consensus 737 ~~~p~V~~VRg~Gl~~~iel~~~~~~ 762 (817)
T PLN02974 737 SSLPNVERVVSLGTVLALELDAEGSG 762 (817)
T ss_pred hhCCCeeEEEeeeeEEEEEEecCCcc
Confidence 46899999999999999999987654
No 172
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=96.54 E-value=0.018 Score=49.98 Aligned_cols=100 Identities=14% Similarity=0.108 Sum_probs=59.6
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhh-hhcCCCCCCchhccccccc-CCcccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAF-QLQGDDIIPDIVTVGKPMG-NGHPVA 160 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~-~~~g~~v~pDi~~~~K~l~-~G~p~~ 160 (224)
+..++++.-.....|.+.+..+..+.+++. ++.+|. .+. .-.. ..+. -.--+-+|+|.+| .|+.+|
T Consensus 158 ~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~-~~~-~~~~~~~~~--~vi~~~S~SK~~g~~GlRiG 233 (361)
T PRK00950 158 KTKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFA-EYD-YTPLALEYD--NLIIGRTFSKVFGLAGLRIG 233 (361)
T ss_pred CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhC-ccc-hHHHHHhcC--CEEEEEeehHhhcCchhhcc
Confidence 344555543456678887777666555544 555552 111 1111 1111 0111237899998 689999
Q ss_pred cceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHH
Q psy6205 161 AVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVME 198 (224)
Q Consensus 161 av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~ 198 (224)
.+++++++.+.+... ..++..++++.+++.+.|+
T Consensus 234 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~l~ 267 (361)
T PRK00950 234 YGFVPEWLIDYYMRA----KTPFSLTRLSQAAAIAALS 267 (361)
T ss_pred hhcCCHHHHHHHHHh----cCCCCCCHHHHHHHHHHhc
Confidence 999999998877643 2345567777777777664
No 173
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=96.52 E-value=0.056 Score=47.12 Aligned_cols=144 Identities=13% Similarity=0.066 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHc-cCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMG-RNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~-~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
.+++++.++... ....++.+|++.-.....|...+-++..+.+++. -..++|... +....++ ..-.+
T Consensus 122 ~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~---~~~~~~~--~d~~~ 196 (361)
T cd06452 122 PEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMP---VSGKELG--ADFIV 196 (361)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcC---CCHHHcC--CCEEE
Confidence 455555554211 0113566777765555567776666666666665 111122111 2223344 32223
Q ss_pred hcccccccCCcccccceecHHHHHhhhcCCcccc---cC-C--CCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHh
Q psy6205 147 VTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYF---NT-Y--GGNPVSCAVANAVMEVLET-ENLREHALDVGNQLHTP 219 (224)
Q Consensus 147 ~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~---~T-~--~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~~ 219 (224)
.+++|.++++.++|.+++++++.+.+......+. .+ + +.++...+++.++++.+.+ -....+..+..++|.+.
T Consensus 197 ~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l~~~ 276 (361)
T cd06452 197 GSGHKSMAASAPIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKARWFVAE 276 (361)
T ss_pred ecCCccccCCCCeEEEEECHHHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999876789999999999988754311110 01 1 1122345555666665432 22233333445788888
Q ss_pred hhhc
Q psy6205 220 KKEN 223 (224)
Q Consensus 220 l~~l 223 (224)
|+++
T Consensus 277 L~~l 280 (361)
T cd06452 277 LEKI 280 (361)
T ss_pred HhcC
Confidence 8765
No 174
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=96.50 E-value=0.061 Score=47.02 Aligned_cols=136 Identities=13% Similarity=0.138 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-------HHhCCccccccchhhhhcCCCCCCchh
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDIV 147 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi~ 147 (224)
++++++.+. .++..|.+--+....|.+.|-++.-+.+++. ...++|..- .-.+. ..+|++
T Consensus 129 ~~~~~~~l~------~~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~---id~~~----~~~D~~ 195 (371)
T PF00266_consen 129 LEDLEEALN------PDTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVP---IDLDE----LGADFL 195 (371)
T ss_dssp HHHHHHHHH------TTESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS-----TTT----TTESEE
T ss_pred hhhhhhhhc------cccceEEeecccccccEEeeeceehhhhhccCCceeEechhcccccc---ccccc----ccccee
Confidence 455555553 4777888888888899999988888888886 222243221 12223 347887
Q ss_pred cc--cccccCCcccccceecHHHHHhhhcCCcccc----------------cCC---CCcHHHHHHHHHHHHHHhh---h
Q psy6205 148 TV--GKPMGNGHPVAAVITTKEIAKSFQETGVEYF----------------NTY---GGNPVSCAVANAVMEVLET---E 203 (224)
Q Consensus 148 ~~--~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~----------------~T~---~~~p~~~aaa~a~l~~~~~---~ 203 (224)
++ -| +.|+.-+|.+.++++..+.+.+...... ..| +-|.....+..++|+.+++ +
T Consensus 196 ~~s~~K-l~gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~ 274 (371)
T PF00266_consen 196 VFSSHK-LGGPPGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIE 274 (371)
T ss_dssp EEESTS-TTSSSTEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHH
T ss_pred eecccc-cCCCCchhhheehhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccc
Confidence 65 58 8886667999999999988853210000 001 2455567777788888854 4
Q ss_pred hHHHHHHHHHHHHHHhhhhcC
Q psy6205 204 NLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 204 ~l~~~~~~~g~~l~~~l~~l~ 224 (224)
++.++..++.+++++.|++++
T Consensus 275 ~i~~~~~~l~~~~~~~l~~~~ 295 (371)
T PF00266_consen 275 RIRERIRELAEYLREALEELP 295 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT
T ss_pred cchhhhhhHHHHHHhhhhcCC
Confidence 677888999999999988753
No 175
>PRK05764 aspartate aminotransferase; Provisional
Probab=96.48 E-value=0.04 Score=48.53 Aligned_cols=74 Identities=15% Similarity=0.145 Sum_probs=52.0
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++|.++ .|+.+|++++++++.+.+... ....+.+.++++..++.+.|+..++ +.+.++.++.-+++++.|+++
T Consensus 235 s~SK~~~~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 311 (393)
T PRK05764 235 GFSKAYAMTGWRLGYAAGPKELIKAMSKL--QSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEI 311 (393)
T ss_pred cCcccccCccceeEEEecCHHHHHHHHHH--HhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 5999998 789999999999999887642 1123456678888888887752111 245556666677777777654
No 176
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=96.47 E-value=0.048 Score=47.50 Aligned_cols=132 Identities=15% Similarity=0.029 Sum_probs=73.8
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCC---CCchhcc--cccccCCc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDI---IPDIVTV--GKPMGNGH 157 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v---~pDi~~~--~K~l~~G~ 157 (224)
.++.+++.| ....|.+.+.++..+.+++. .+.++ -.+..-+.....+.++ ..|.+++ -|-..++.
T Consensus 154 ~~~vv~~~~-~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~-~~~~~~~~~~~~~~d~~~~~~d~~~~s~~K~~~~~~ 231 (373)
T TIGR03812 154 TIGIVGIAG-TTELGQIDDIEELSKIALENGIYLHVDAAFGGF-VIPFLKKGYNPPPFDFSLPGVQSITIDPHKMGLSPI 231 (373)
T ss_pred cEEEEEECC-CCCCCccCCHHHHHHHHHHcCCeEEEEcCchhH-HHHHHhcCCCCCCccccCCCCCEEEECccccCCCcC
Confidence 345666766 35578888777777777765 22211 0000000000001011 2344433 26323346
Q ss_pred ccccce-ecHHHHHhhhcCCccccc------CCCCcHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHhhhhcC
Q psy6205 158 PVAAVI-TTKEIAKSFQETGVEYFN------TYGGNPVSCAVANAVMEVLETE---NLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 158 p~~av~-~~~~i~~~~~~~~~~~~~------T~~~~p~~~aaa~a~l~~~~~~---~l~~~~~~~g~~l~~~l~~l~ 224 (224)
|.|+++ .++++.+.+......+.. +.+-++.+++++.++|+.+.++ ++.+++.++.++|+++|++++
T Consensus 232 ~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~g 308 (373)
T TIGR03812 232 PAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKIG 308 (373)
T ss_pred CceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 777666 577777766422111111 1234567888999999988654 578899999999999998764
No 177
>PLN00175 aminotransferase family protein; Provisional
Probab=96.44 E-value=0.036 Score=49.47 Aligned_cols=128 Identities=15% Similarity=0.153 Sum_probs=74.4
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCc-h--hccccccc-
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPD-I--VTVGKPMG- 154 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pD-i--~~~~K~l~- 154 (224)
++.+|++.....-.|.+. +++.++++.++ +...|-..+. .-....+. +..+. | -+|||.++
T Consensus 187 ~~k~i~i~~p~NPtG~~~-s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~s~~~~~-~~~~~vi~i~SfSK~~~~ 263 (413)
T PLN00175 187 KTRAILINTPHNPTGKMF-TREELELIASLCKENDVLAFTDEVYDKLAFEGD-HISMASLP-GMYERTVTMNSLGKTFSL 263 (413)
T ss_pred CceEEEecCCCCCCCcCC-CHHHHHHHHHHHHHcCcEEEEecccCccccCCc-ccChhhCC-CCcCcEEEEecchhhccC
Confidence 456677665455567654 56666776665 2222211111 00111110 01122 2 26899998
Q ss_pred CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 155 NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 155 ~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
.|+-+|.+++++++++.+... ....+++.+++...++.+.|+.-++ +++.++.++.-+.+.+.|++.
T Consensus 264 ~G~RiG~~v~~~~l~~~l~~~--~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (413)
T PLN00175 264 TGWKIGWAIAPPHLTWGVRQA--HSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV 332 (413)
T ss_pred cchheeeeEeCHHHHHHHHHH--HhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 789999999999999887643 2224677777877777777753211 234556666677777777654
No 178
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=96.44 E-value=0.0043 Score=56.25 Aligned_cols=80 Identities=24% Similarity=0.279 Sum_probs=45.6
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCC---CccccCCCCCCCCCChhHHHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPC---PDVYRGKYPADKYPDEDLGVKYAQDV 78 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~---P~~yr~~~~~~~~~~~~~~~~~~~~l 78 (224)
++||.++||||+|||+|+|++.+.. .+....+..+.......+.+..+. ++..|...+... +++..++.++.|
T Consensus 362 ~~~~~~~~VrG~Gl~~gve~~~~~~--~~~~~~~~~~~~~~~~~Gv~~~~~g~~~~~lr~~Ppl~i--t~~~id~~~~~l 437 (457)
T PRK05639 362 ESFEVIGDVRGKGLMIGVEIVKENG--KPDPELTGKICWRAFELGLILPSYGMFGNVIRITPPLVI--TKEIAEKGLEIM 437 (457)
T ss_pred HhCCCEEeeccceeEEEEEEecCCC--CCCHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCcc--CHHHHHHHHHHH
Confidence 3589999999999999999986433 222222333333333334433332 233333222221 366677778888
Q ss_pred HHHHHHH
Q psy6205 79 QDLIEAM 85 (224)
Q Consensus 79 ~~~~~~~ 85 (224)
++.++.+
T Consensus 438 ~~~l~~~ 444 (457)
T PRK05639 438 ERAIKDA 444 (457)
T ss_pred HHHHHHH
Confidence 8877654
No 179
>PRK07550 hypothetical protein; Provisional
Probab=96.29 E-value=0.038 Score=48.66 Aligned_cols=75 Identities=11% Similarity=0.067 Sum_probs=51.2
Q ss_pred hhccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhh
Q psy6205 146 IVTVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 146 i~~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~ 222 (224)
+.+++|.++ .|+.+|++++++++++.+... ....+.+.++++..++.+.|+.+++ ++..+++++..+++.+.|++
T Consensus 231 ~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~--~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 308 (386)
T PRK07550 231 LYSFSKSYALTGHRVGAVVASPARIAEIEKF--MDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFAR 308 (386)
T ss_pred EecchhhccCcccceEeeecCHHHHHHHHHH--HhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 348999998 789999999999998877642 2223455567776776666654432 23455667777777777754
No 180
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=96.29 E-value=0.027 Score=48.86 Aligned_cols=126 Identities=11% Similarity=0.050 Sum_probs=79.0
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-------HHhCCccccccchhhhhcCCCCCCchhccc--ccccCCccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG--KPMGNGHPVAA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~--K~l~~G~p~~a 161 (224)
+...|++..+....|.+.+.++..+.+++. -..++|..- +..+. ...|+++++ |.+| -..+|+
T Consensus 138 ~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~---~~~~~----~~~D~~~~s~~K~~g-p~g~g~ 209 (353)
T TIGR03235 138 DTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKIT---VDLSA----DRIDLISCSGHKIYG-PKGIGA 209 (353)
T ss_pred CCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCcc---ccccc----cCCCEEEeehhhcCC-CCceEE
Confidence 467888888888899998877777777776 112232211 11111 238998887 9642 123678
Q ss_pred ceecHHHHHhhhcCCccc-------ccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhcC
Q psy6205 162 VITTKEIAKSFQETGVEY-------FNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 162 v~~~~~i~~~~~~~~~~~-------~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l~ 224 (224)
++++++..+........+ ....+-|+...++..++|+++.+ ++..++.+++.++|+++|+++|
T Consensus 210 l~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~g 281 (353)
T TIGR03235 210 LVIRKRGKPKAPLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIARRNAQAWEVKLRAMRNQLRDALQTLG 281 (353)
T ss_pred EEEccCcccccccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCC
Confidence 888887532211000000 12334566777778888888753 4678889999999999987653
No 181
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=96.29 E-value=0.042 Score=47.35 Aligned_cols=121 Identities=18% Similarity=0.184 Sum_probs=72.9
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhccc----ccccCCc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG----KPMGNGH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~----K~l~~G~ 157 (224)
+++.+|++.... |...+.++..+.+++. +++ +|... .....+ ...|+.++| |.+++|
T Consensus 105 ~~~~~v~~~~~~---G~~~~~~~i~~l~~~~~i~li~D~a~~-~g~~~----~~~~~~--~~~d~~~~S~~~~K~~~~~- 173 (352)
T cd00616 105 PRTKAIIPVHLY---GNPADMDAIMAIAKRHGLPVIEDAAQA-LGATY----KGRKVG--TFGDAGAFSFHPTKNLTTG- 173 (352)
T ss_pred cCCeEEEEECCC---CCcCCHHHHHHHHHHcCCeEEEECCCC-CCCeE----CCEEcc--cCcceeEEcCCCCCCCccc-
Confidence 356777776654 5555555555555554 333 32211 111223 346888876 999644
Q ss_pred ccccceec-HHHHHhhhc---CCc----------ccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITT-KEIAKSFQE---TGV----------EYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~-~~i~~~~~~---~~~----------~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
..|+++++ +++.+.+.. .+. ....++..+++.++.++..++.+ +++.++.+++.+++++.|+++
T Consensus 174 ~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~--~~~~~~~~~~~~~~~~~L~~~ 251 (352)
T cd00616 174 EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKL--DEIIARRREIAERYKELLADL 251 (352)
T ss_pred CceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHhcCC
Confidence 34556665 577665432 110 11235667889999998887776 447788899999999998764
No 182
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=96.28 E-value=0.0075 Score=53.16 Aligned_cols=73 Identities=26% Similarity=0.336 Sum_probs=42.7
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeec-CCCccccCCCCCCCCCChhHHHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEA-PCPDVYRGKYPADKYPDEDLGVKYAQDVQDL 81 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~v-p~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~ 81 (224)
++|.|.+|||+|||.|+||..+.. +..++......+.+.. ..+++.|-..+-.- +++..+..++.+++.
T Consensus 326 ~~~~v~~vRG~GLmiGiel~~~~~--------a~~~~~~~~~~gvL~~~a~~~ViR~~PpL~i--~~eei~~~~~~l~~~ 395 (404)
T COG4992 326 RYPLVKEVRGRGLMIGIELKEPYR--------ARDIVRALREEGVLVLPAGPNVIRFLPPLVI--TEEEIDEALDALERA 395 (404)
T ss_pred cCCceeeeecceeEEEEEecCccc--------HHHHHHHHHHCCeEEecCCCCeEEecCCccC--CHHHHHHHHHHHHHH
Confidence 478889999999999999976431 1112222222233322 34555554433221 256667777888887
Q ss_pred HHHH
Q psy6205 82 IEAM 85 (224)
Q Consensus 82 ~~~~ 85 (224)
++..
T Consensus 396 l~~~ 399 (404)
T COG4992 396 LAAA 399 (404)
T ss_pred HHHh
Confidence 7753
No 183
>PRK06541 hypothetical protein; Provisional
Probab=96.23 E-value=0.0081 Score=54.52 Aligned_cols=80 Identities=21% Similarity=0.202 Sum_probs=45.6
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCcccc------chhhhccCCCcceeecCCC---ccccCCCCCCCCCChhHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSE------AQHVITRPPVRMSTEAPCP---DVYRGKYPADKYPDEDLGVK 73 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~------a~~l~~~~~~~~~~~vp~P---~~yr~~~~~~~~~~~~~~~~ 73 (224)
+||.|+++||.|+|+|+||+.+..++.|+... ...+....+..+.+..+.+ +..|...+... +++..++
T Consensus 367 ~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~g~~~lrl~Ppl~~--t~~~id~ 444 (460)
T PRK06541 367 DLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADDRGDPVVQLAPPLIS--GQEEFDE 444 (460)
T ss_pred cCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecCCCCCEEEEECCCCC--CHHHHHH
Confidence 48889999999999999999776665554321 0122223333344333221 22222222111 2566777
Q ss_pred HHHHHHHHHHH
Q psy6205 74 YAQDVQDLIEA 84 (224)
Q Consensus 74 ~~~~l~~~~~~ 84 (224)
.++.|++.+..
T Consensus 445 ~~~~l~~~l~~ 455 (460)
T PRK06541 445 IEQILRSVLTE 455 (460)
T ss_pred HHHHHHHHHHH
Confidence 77778777764
No 184
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=96.20 E-value=0.031 Score=49.58 Aligned_cols=124 Identities=12% Similarity=0.094 Sum_probs=79.1
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhccc--ccccCCcccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG--KPMGNGHPVA 160 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~--K~l~~G~p~~ 160 (224)
+..+|++..+....|.+.+.++..+.+++. +|+ +|... ....+ ..+|+++++ |.+| ...+|
T Consensus 142 ~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a-~g~~~-----~~~~~--~~~D~~~~s~~K~~g-p~G~G 212 (402)
T TIGR02006 142 DTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQS-VGKIP-----INVNE--LKVDLMSISGHKIYG-PKGIG 212 (402)
T ss_pred CCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchh-cCCcc-----cCccc--cCCCEEEEehhhhcC-CCceE
Confidence 467888888888899998877777777776 443 33221 11112 458999999 9654 23478
Q ss_pred cceecHHHHHhhhcC--C--cc-cccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 161 AVITTKEIAKSFQET--G--VE-YFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 161 av~~~~~i~~~~~~~--~--~~-~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++.+++..+.+... + .. .....+-|...+++..++|+.+++ +...++.+++.++|+++|+++
T Consensus 213 ~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~~ 282 (402)
T TIGR02006 213 ALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLNGIKSI 282 (402)
T ss_pred EEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC
Confidence 888887654433221 0 00 011233455666666688888854 345677888889998888754
No 185
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=96.18 E-value=0.0069 Score=54.66 Aligned_cols=78 Identities=21% Similarity=0.234 Sum_probs=42.7
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCC---CccccCCCCCCCCCChhHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPC---PDVYRGKYPADKYPDEDLGVKYAQDVQ 79 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~---P~~yr~~~~~~~~~~~~~~~~~~~~l~ 79 (224)
+||.|++|||.|+|+++|++++. +..+....+..+.......+....+. +++.|-..+... +++..++.++.|+
T Consensus 361 ~~~~i~~vrg~G~~~~i~~~~~~-~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~Ppl~~--t~~~i~~~~~~l~ 437 (443)
T PRK06058 361 EDDRIGDVRGRGAMIAIELVKPG-TTEPDAELTKALAAAAHAAGVIVLTCGTYGNVIRLLPPLVI--GDELLREGLDVLE 437 (443)
T ss_pred hCCcEEeeeccceEEEEEEecCC-CCCCcHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCcc--CHHHHHHHHHHHH
Confidence 47999999999999999998764 22333333333443333334433321 233332111111 2556666667676
Q ss_pred HHHH
Q psy6205 80 DLIE 83 (224)
Q Consensus 80 ~~~~ 83 (224)
+.++
T Consensus 438 ~~l~ 441 (443)
T PRK06058 438 AALA 441 (443)
T ss_pred HHHH
Confidence 6654
No 186
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=96.15 E-value=0.0068 Score=53.37 Aligned_cols=70 Identities=17% Similarity=0.132 Sum_probs=38.7
Q ss_pred CCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCC-CccccCCCCCCCCCChhHHHHHHHHHHHHH
Q psy6205 4 YPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPC-PDVYRGKYPADKYPDEDLGVKYAQDVQDLI 82 (224)
Q Consensus 4 ~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~-P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~ 82 (224)
+|.|+||||+|||+|+||+.. +. .+....+..+.+..+. ++..|..++..- +++..++.++.|++.+
T Consensus 291 ~~~v~~vRG~Gl~~gve~~~~------~~----~i~~~~~~~Gll~~~~g~~vlr~~Ppl~i--t~~~i~~~~~~l~~~l 358 (364)
T PRK04013 291 GERVVTTRGRGLMIGIVLKKP------VG----KYVEELQNRGYLVHTAGQRVIRLLPPLII--SKDTMEEAKSAIEGVI 358 (364)
T ss_pred cCcceeeeeCcEEEEEEeCCc------HH----HHHHHHHhCCcEEeeCCCCEEEEeCCccc--CHHHHHHHHHHHHHHH
Confidence 478999999999999999631 11 1222222223222222 133332222111 2566777788888777
Q ss_pred HHH
Q psy6205 83 EAM 85 (224)
Q Consensus 83 ~~~ 85 (224)
+.+
T Consensus 359 ~~~ 361 (364)
T PRK04013 359 NDI 361 (364)
T ss_pred HHH
Confidence 643
No 187
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=96.10 E-value=0.059 Score=47.77 Aligned_cols=124 Identities=13% Similarity=0.080 Sum_probs=80.0
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhccc--ccccCCcccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG--KPMGNGHPVA 160 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~--K~l~~G~p~~ 160 (224)
+...|++.-+....|.+.+.++..+.+++. +| ++|..- ...+. ..+|+++++ |.+|- .-+|
T Consensus 164 ~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~-~~g~~~---~~~~~----~~~D~~~~s~~K~~gp-~G~G 234 (406)
T PRK09295 164 RTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQ-AVMHHP---VDVQA----LDCDFYVFSGHKLYGP-TGIG 234 (406)
T ss_pred CcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEccc-ccCccc---cCchh----cCCCEEEeehhhccCC-CCcE
Confidence 456777777777789998877777777775 33 233221 11122 347988776 95541 2267
Q ss_pred cceecHHHHHhhhcC--Ccc--------c----------ccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHH
Q psy6205 161 AVITTKEIAKSFQET--GVE--------Y----------FNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQLH 217 (224)
Q Consensus 161 av~~~~~i~~~~~~~--~~~--------~----------~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~ 217 (224)
.+++++++.+.+... +.. . +.+-+-|..+.++..++|+.+.+ +.+.++.+++.+++.
T Consensus 235 ~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~ 314 (406)
T PRK09295 235 ILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYAL 314 (406)
T ss_pred EEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 888999887765321 000 0 01114567788888899998865 457788888999999
Q ss_pred Hhhhhc
Q psy6205 218 TPKKEN 223 (224)
Q Consensus 218 ~~l~~l 223 (224)
++|+++
T Consensus 315 ~~l~~~ 320 (406)
T PRK09295 315 SQLESV 320 (406)
T ss_pred HHHhcC
Confidence 988764
No 188
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=96.08 E-value=0.085 Score=46.58 Aligned_cols=124 Identities=11% Similarity=0.017 Sum_probs=76.4
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhccc--ccccCCcccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG--KPMGNGHPVA 160 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~--K~l~~G~p~~ 160 (224)
+...|++.-+....|.+.+.++..+.+++. ++. +|..- ..... ..+|+++++ |.+|- .-+|
T Consensus 157 ~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~-~~~~~---~~~~~----~~~d~~~~s~~K~~gp-~G~G 227 (398)
T TIGR03392 157 RTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQG-VVHGP---PDVQA----LDIDFYAFSGHKLYGP-TGIG 227 (398)
T ss_pred CceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhh-cCCCC---CChhh----cCCCEEEEecccccCC-CceE
Confidence 455666766677788888877777777776 442 22111 11111 347999998 96652 1268
Q ss_pred cceecHHHHHhhhcCC--cc----------------c-ccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHH
Q psy6205 161 AVITTKEIAKSFQETG--VE----------------Y-FNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQLHT 218 (224)
Q Consensus 161 av~~~~~i~~~~~~~~--~~----------------~-~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~~ 218 (224)
++++++++.+.+.... .. . +-+-+-|..+.++..++++.+++ +++.++.+++.+++.+
T Consensus 228 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~ 307 (398)
T TIGR03392 228 VLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEE 307 (398)
T ss_pred EEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 8889999887664210 00 0 00012344567777777877754 3567778888889988
Q ss_pred hhhhc
Q psy6205 219 PKKEN 223 (224)
Q Consensus 219 ~l~~l 223 (224)
.|+++
T Consensus 308 ~l~~l 312 (398)
T TIGR03392 308 RLAQL 312 (398)
T ss_pred HHhcC
Confidence 88764
No 189
>PRK07324 transaminase; Validated
Probab=96.08 E-value=0.037 Score=48.68 Aligned_cols=73 Identities=12% Similarity=0.074 Sum_probs=47.4
Q ss_pred hccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhh
Q psy6205 147 VTVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 147 ~~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~ 221 (224)
-++||.+| .|+-+|.+++++++++.+... ....|++.++++..++..+|+..++ +...+.+++.-+.+.+.|+
T Consensus 218 ~s~SK~~~~~G~RiG~i~~~~~li~~~~~~--~~~~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~ 293 (373)
T PRK07324 218 NSMSKTYSLPGIRVGWIAANEEVIDILRKY--RDYTMICAGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVA 293 (373)
T ss_pred ecchhhcCCccceeEEEecCHHHHHHHHHH--hCcEEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 37999998 689999999999999888653 2234667778888877777753211 1223333444444545444
No 190
>KOG1368|consensus
Probab=96.07 E-value=0.042 Score=46.69 Aligned_cols=143 Identities=15% Similarity=0.141 Sum_probs=75.3
Q ss_pred HHHHHHHHHHHHc--cCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-HHhCCccc---cccch-hhhhcCCCC----
Q psy6205 74 YAQDVQDLIEAMG--RNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-VQVGFGRV---GTHWW-AFQLQGDDI---- 142 (224)
Q Consensus 74 ~~~~l~~~~~~~~--~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-v~tG~Grt---G~~~~-~~~~~g~~v---- 142 (224)
.++++|+.+..-. -+......|.+|--+..-|-...|-+|+.++.++ -+.|+ .. |...| +.-..|..|
T Consensus 135 ~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~gl-kLH~DGARi~NAavasgV~vk~i~ 213 (384)
T KOG1368|consen 135 DLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGL-KLHMDGARIFNAAVASGVPVKKIC 213 (384)
T ss_pred eHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCC-eeecchhhhhhHHHHcCCCHHHHH
Confidence 4677777765210 0112346788998887756677888999999999 11111 00 00011 111112000
Q ss_pred -CCc--hhcccccccCCccc-ccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q psy6205 143 -IPD--IVTVGKPMGNGHPV-AAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHT 218 (224)
Q Consensus 143 -~pD--i~~~~K~l~~G~p~-~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~ 218 (224)
.-| -+||||+||. |+ |.++++++..+.....-..++.-+-=.-+-||||+-+|+.-- .++..-++....|.+
T Consensus 214 ~~fDSVsiCLSKglgA--PVGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~~~--~~L~~dHk~A~~lAe 289 (384)
T KOG1368|consen 214 SAFDSVSICLSKGLGA--PVGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVALDENV--PLLRADHKRAKELAE 289 (384)
T ss_pred HhhhhhhhhhhccCCC--CcccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhcch--HHHHHHHHHHHHHHH
Confidence 123 3599999974 22 336788887765432111222222223467788887776532 244455555555544
Q ss_pred hhh
Q psy6205 219 PKK 221 (224)
Q Consensus 219 ~l~ 221 (224)
.++
T Consensus 290 ~~~ 292 (384)
T KOG1368|consen 290 YIN 292 (384)
T ss_pred Hhc
Confidence 443
No 191
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=95.92 E-value=0.037 Score=49.17 Aligned_cols=124 Identities=12% Similarity=0.102 Sum_probs=74.2
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchh--cccccccC-Ccc-ccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN-GHP-VAA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~-G~p-~~a 161 (224)
+..+|++|......|.+.+.+++.+.+++. |-.-+ .++. . ....+ .-.|++ +++|.+++ |.+ .|+
T Consensus 144 ~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD~a~-a~~~-~--~~~~~--~g~Divv~S~sK~lgg~g~~~gG~ 217 (391)
T TIGR01328 144 NTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVDNTF-ATPM-L--TNPVA--LGVDVVVHSATKYIGGHGDVVAGL 217 (391)
T ss_pred CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCC-chhc-c--CCchh--cCCCEEEccccccccCCCCceEEE
Confidence 567899997777778877766666666665 11111 1111 0 11112 336766 47899986 554 466
Q ss_pred ceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh
Q psy6205 162 VITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 162 v~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~ 222 (224)
+++++++.+.+.........+...+|..++.++..|+.+.. ..++.+++.+++.+.|++
T Consensus 218 v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~tl~~--r~~~~~~na~~la~~L~~ 276 (391)
T TIGR01328 218 ICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLKTLNI--RMKRHSENAMKVAEYLKS 276 (391)
T ss_pred EEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCcHHH--HHHHHHHHHHHHHHHHHh
Confidence 78889888777632111122345688888888887766643 355556666666666653
No 192
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=95.85 E-value=0.088 Score=45.91 Aligned_cols=126 Identities=14% Similarity=0.115 Sum_probs=76.5
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-------HHhCCccccccchhhhhcCCCCCCchhccc--ccccCCccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG--KPMGNGHPVAA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~--K~l~~G~p~~a 161 (224)
++.+|++.......|.+.+.++..+.+++. -..++|... +..+.+ .+|+++++ |.+++....|+
T Consensus 137 ~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~~---~~~~~~----~~D~~~~s~~K~l~~p~g~g~ 209 (376)
T TIGR01977 137 NTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVIP---IDMTEL----AIDMLAFTGHKGLLGPQGTGG 209 (376)
T ss_pred CCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCccC---CCchhc----CCCEEEecccccccCCCCceE
Confidence 567788887788889888877777777665 223344332 112223 37887654 98865333455
Q ss_pred ceecHHHH-HhhhcCCccc--------------ccCCCCcHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHhhhhc
Q psy6205 162 VITTKEIA-KSFQETGVEY--------------FNTYGGNPVSCAVANAVMEVLETE---NLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 162 v~~~~~i~-~~~~~~~~~~--------------~~T~~~~p~~~aaa~a~l~~~~~~---~l~~~~~~~g~~l~~~l~~l 223 (224)
++.+++.. ..+...+... +.+.+-+...+++..++|+.+.+. ++.++.+++.+++.++|+++
T Consensus 210 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~ 289 (376)
T TIGR01977 210 LYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREI 289 (376)
T ss_pred EEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC
Confidence 66665531 1111110000 011234566777788899988653 57888999999999998753
No 193
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=95.82 E-value=0.011 Score=53.05 Aligned_cols=22 Identities=36% Similarity=0.453 Sum_probs=19.4
Q ss_pred CCCCcceeeccCCceeEEEEee
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVT 23 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~ 23 (224)
.++|.|+||||+|+|++||+..
T Consensus 348 ~~~~~v~~vRg~Gl~~~ie~~~ 369 (422)
T PRK05630 348 AHLPGVADVRVLGAIGVVEMEQ 369 (422)
T ss_pred hcCCCeeeeeccccEEEEEECC
Confidence 3588999999999999999964
No 194
>PRK02948 cysteine desulfurase; Provisional
Probab=95.78 E-value=0.054 Score=47.48 Aligned_cols=125 Identities=18% Similarity=0.048 Sum_probs=78.6
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchh--cccccccCCcccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGNGHPVA 160 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~G~p~~ 160 (224)
+...|+++-+....|.+.+.++..+.+++. ++ .||.... ..+.++ .|++ ++.|.+|- .-+|
T Consensus 138 ~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~-~~g~~~~---~~~~~~----~d~~~~s~~K~~gp-~G~G 208 (381)
T PRK02948 138 DTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQ-TFGKLPI---DVFEMG----IDSLSVSAHKIYGP-KGVG 208 (381)
T ss_pred CCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChh-hcccccc---CcccCC----CCEEEecHHhcCCC-CcEE
Confidence 456788888888899998877777766665 22 2443321 122233 5665 67897651 1157
Q ss_pred cceecHHH-HHhhhcCC--cccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhcC
Q psy6205 161 AVITTKEI-AKSFQETG--VEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 161 av~~~~~i-~~~~~~~~--~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l~ 224 (224)
+++.++++ +....... ..-...++-|+.+.+++.++|+.+.+ ++..++++++.++|.++|++++
T Consensus 209 ~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 277 (381)
T PRK02948 209 AVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLP 277 (381)
T ss_pred EEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 77777764 11111000 00112456788888999999987732 4678889999999999998764
No 195
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=95.73 E-value=0.11 Score=45.83 Aligned_cols=124 Identities=14% Similarity=0.094 Sum_probs=76.6
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhc--ccccccCCcccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGNGHPVA 160 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~G~p~~ 160 (224)
++.+|++.-+....|.+.+.++..+.+++. .+ ++|..- ..... ..+|+++ +.|.+|. ..+|
T Consensus 159 ~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~-~~g~~~---~~~~~----~~~d~~~~s~~K~~gp-~G~g 229 (403)
T TIGR01979 159 KTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQ-AVPHMP---VDVQA----LDCDFYVFSGHKMYGP-TGIG 229 (403)
T ss_pred CCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchh-hcCccc---cCccc----cCCCEEEEecccccCC-CCce
Confidence 566777777777789888877776666665 22 121110 11111 3478875 4597652 2367
Q ss_pred cceecHHHHHhhhcCCcc--------c-----------ccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHH
Q psy6205 161 AVITTKEIAKSFQETGVE--------Y-----------FNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQLHT 218 (224)
Q Consensus 161 av~~~~~i~~~~~~~~~~--------~-----------~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~~ 218 (224)
++.+++++.+.+...... + +.+-+.+..+.++..++++.+.+ +.+.++..++.+++++
T Consensus 230 ~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~ 309 (403)
T TIGR01979 230 VLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALE 309 (403)
T ss_pred EEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 788999887765421000 0 00112355567777788888754 4678899999999999
Q ss_pred hhhhc
Q psy6205 219 PKKEN 223 (224)
Q Consensus 219 ~l~~l 223 (224)
+|+++
T Consensus 310 ~l~~~ 314 (403)
T TIGR01979 310 RLGEI 314 (403)
T ss_pred HHhcC
Confidence 88764
No 196
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=95.73 E-value=0.028 Score=48.76 Aligned_cols=73 Identities=15% Similarity=0.243 Sum_probs=53.9
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhcC
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~l~ 224 (224)
+|||.+| .|+-+|.+++++++++.+... ...+.-|.++.+++.++|+--+ .+...+++++.-+++.+.|++++
T Consensus 195 SfSK~~gl~GlRiGy~v~~~~li~~l~~~----~~~~~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g 269 (339)
T PRK06959 195 SVGKFFGLAGVRAGFVLAAPALLAALRDA----LGAWTVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAHG 269 (339)
T ss_pred cChhhcCCcchheEEEecCHHHHHHHHHh----cCCCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 7999999 789999999999999988653 2345567788888888875321 23456667777778888887653
No 197
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=95.69 E-value=0.014 Score=52.65 Aligned_cols=77 Identities=30% Similarity=0.345 Sum_probs=41.9
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCCC-ccccCCCCCCCCCChhHHHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPCP-DVYRGKYPADKYPDEDLGVKYAQDVQDL 81 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~P-~~yr~~~~~~~~~~~~~~~~~~~~l~~~ 81 (224)
+||.+++|||.|+|+++||+.+. +.+....+..+....+..+.+..+.. +..|...+... +++..++.++.+++.
T Consensus 361 ~~~~~~~vrg~G~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~Gil~~~~~~~~lr~~p~l~~--t~~~id~~~~~l~~~ 436 (441)
T PRK05769 361 KYEFIGDVRGLGLMIGVELVKDR--KEPDPKLRDKVLYEAFKRGLLLLGAGKSAIRIIPPLII--TEEEADIGLEILEEA 436 (441)
T ss_pred hCCCeeeeecceEEEEEEeccCC--ccccHHHHHHHHHHHHhCCcEEecCCCCEEEEeCCCCC--CHHHHHHHHHHHHHH
Confidence 48999999999999999998654 22222223333333333344333321 22222112111 256666777777766
Q ss_pred HH
Q psy6205 82 IE 83 (224)
Q Consensus 82 ~~ 83 (224)
+.
T Consensus 437 l~ 438 (441)
T PRK05769 437 IK 438 (441)
T ss_pred HH
Confidence 64
No 198
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=95.68 E-value=0.077 Score=46.17 Aligned_cols=101 Identities=13% Similarity=0.168 Sum_probs=60.2
Q ss_pred ceEEEEccccCCCCcccCCHHHHHHHHHH----------HHhCCccccccchhhhhcCCCCCCchhccccccc-CCcccc
Q psy6205 92 PCAFFAESLQSCGGQIIPPANYLREVYKH----------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMG-NGHPVA 160 (224)
Q Consensus 92 iaavi~Epv~~~~G~~~~~~~~l~~~~~~----------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~-~G~p~~ 160 (224)
..++++-..+.-.|.+.+..+..+.++.. +...|...+......+... -..-+-+|||.++ .|+-+|
T Consensus 155 ~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~--~vi~~~SfSK~~~~~GlRiG 232 (357)
T PRK14809 155 ERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVDEAYGEFAERPSAVALVEERD--DVAVLRTFSKAYGLAGLRLG 232 (357)
T ss_pred CcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCC--CEEEEecchhHhcCcchhhe
Confidence 34555555555578777666544433321 4333422222111111111 1122347999998 689999
Q ss_pred cceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHH
Q psy6205 161 AVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVME 198 (224)
Q Consensus 161 av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~ 198 (224)
.+++++++++.+... ..++..++++..++.+.|+
T Consensus 233 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~l~ 266 (357)
T PRK14809 233 YAVVPEEWADAYARV----NTPFAASELACRAGLAALD 266 (357)
T ss_pred eeecCHHHHHHHHHh----CCCCCCCHHHHHHHHHHhC
Confidence 999999999888642 2467778888888887774
No 199
>PRK06348 aspartate aminotransferase; Provisional
Probab=95.66 E-value=0.14 Score=45.03 Aligned_cols=73 Identities=12% Similarity=0.054 Sum_probs=51.1
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhh
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~ 222 (224)
+|||.++ .|+-+|.+++++++.+.+... ....+++.++++-.++...|+..++ +.+.+..++.-+++.+.|++
T Consensus 231 SfSK~~~l~GlRiG~~v~~~~~~~~~~~~--~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~ 306 (384)
T PRK06348 231 SFSKDFAMTGWRIGYVIAPDYIIETAKII--NEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIES 306 (384)
T ss_pred cchhccCCccccceeeecCHHHHHHHHHH--HHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6899998 789999999999998877532 2234677788888888777764321 23455556666666666654
No 200
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=95.63 E-value=0.018 Score=51.94 Aligned_cols=77 Identities=17% Similarity=0.080 Sum_probs=41.1
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLI 82 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~ 82 (224)
++|.|+||||+|+++++|++....... ..+..+..+....+.+..+..+..|...+... +++..++.++.|++.+
T Consensus 364 ~~~~v~~vrG~Gl~~~~~l~~~~~~~~---~~~~~~~~~l~~~Gvl~~~~~~~lr~~Ppl~~--t~~eid~~~~~l~~~l 438 (442)
T PRK13360 364 DAPHVIDIRNLGLVGAVELAPRDGKPG---KRAYEVFLKCFEKGLMIRYTGDILALSPPLII--EEAQIDELFDILAQAL 438 (442)
T ss_pred cCCCeeeeeccceEEEEEEecCCCCcc---hhHHHHHHHHHHCCcEEEecCCEEEEeCCCcc--CHHHHHHHHHHHHHHH
Confidence 478899999999999999985332111 11222222222233333333333332222111 2566677777777766
Q ss_pred HH
Q psy6205 83 EA 84 (224)
Q Consensus 83 ~~ 84 (224)
+.
T Consensus 439 ~~ 440 (442)
T PRK13360 439 KE 440 (442)
T ss_pred HH
Confidence 53
No 201
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=95.61 E-value=0.019 Score=51.56 Aligned_cols=80 Identities=21% Similarity=0.232 Sum_probs=44.6
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCC---CccccCCCCCCCCCChhHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPC---PDVYRGKYPADKYPDEDLGVKYAQDVQ 79 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~---P~~yr~~~~~~~~~~~~~~~~~~~~l~ 79 (224)
++|.+++|||.|+|.++||+.+ ++..|....+..+.......+.+..+. .+..|-.++..- +++..++.++.|+
T Consensus 340 ~~~~i~~vrG~Gl~~~iel~~~-~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r~~Ppl~i--t~~~id~~~~~l~ 416 (425)
T PRK07495 340 TVPEIADIRGPGFMNAVEFNDA-DSGLPSAEFANRVRLKALEKGLILLTCGVHGNVIRFLAPITI--QDDVFAEALDILE 416 (425)
T ss_pred hCCCeeeeecCceEEEEEEecC-CCCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEeCCCcc--CHHHHHHHHHHHH
Confidence 4788999999999999999753 233333322333333333334333221 133222222111 2666777788888
Q ss_pred HHHHHH
Q psy6205 80 DLIEAM 85 (224)
Q Consensus 80 ~~~~~~ 85 (224)
+.++.+
T Consensus 417 ~~l~~~ 422 (425)
T PRK07495 417 ASILEA 422 (425)
T ss_pred HHHHHH
Confidence 877654
No 202
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=95.59 E-value=0.022 Score=51.46 Aligned_cols=78 Identities=18% Similarity=0.164 Sum_probs=41.2
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDL 81 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~ 81 (224)
++||.|++|||.|+++++||+..... +. ..+..+.......+.+..+..+..|...+... +++..++.++.|++.
T Consensus 366 ~~~~~v~~vrg~Gl~~~v~~~~~~~~--~~-~~~~~~~~~~~~~Gv~~~~~~~~lr~~Ppl~~--t~~eid~~~~~l~~~ 440 (445)
T PRK09221 366 KGLPHVIDIRNIGLVAGIELAPRPGA--PG-ARGYEAFMKCFEKGLLVRYTGDTIALSPPLII--EKAQIDELVDALGDA 440 (445)
T ss_pred ccCCCEEEEecCceEEEEEEeccccc--cc-chHHHHHHHHHHCCeEEeecCCEEEEECCccC--CHHHHHHHHHHHHHH
Confidence 35788999999999999999853221 11 11122222222223333223333332222111 256667777777776
Q ss_pred HHH
Q psy6205 82 IEA 84 (224)
Q Consensus 82 ~~~ 84 (224)
+..
T Consensus 441 l~~ 443 (445)
T PRK09221 441 LRA 443 (445)
T ss_pred HHh
Confidence 653
No 203
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=95.56 E-value=0.15 Score=44.98 Aligned_cols=74 Identities=5% Similarity=0.104 Sum_probs=50.0
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHH--hhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVL--ETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~--~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++|.+| .|+-+|++++++++++.+... ....+.+.++++..++.+.|+.- ....+.++.++.-+++.+.|++.
T Consensus 234 S~SK~~g~~GlRvG~~v~~~~~~~~~~~~--~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 310 (391)
T PRK07309 234 GLSKSHAMTGWRIGLIFAPAEFTAQLIKS--HQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDL 310 (391)
T ss_pred cChhhccCccceeEEEEeCHHHHHHHHHH--HhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC
Confidence 6899998 689999999999999888643 11233455677777777666542 12344556666667777777653
No 204
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=95.55 E-value=0.23 Score=43.86 Aligned_cols=78 Identities=19% Similarity=0.240 Sum_probs=47.2
Q ss_pred Cchh--cccccccCCcccccceecH-HHHHhhhcCCcccccCCC-CcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHH
Q psy6205 144 PDIV--TVGKPMGNGHPVAAVITTK-EIAKSFQETGVEYFNTYG-GNPVSCAVANAVMEVLET---ENLREHALDVGNQL 216 (224)
Q Consensus 144 pDi~--~~~K~l~~G~p~~av~~~~-~i~~~~~~~~~~~~~T~~-~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l 216 (224)
.|++ +++|.+ .|.+.|++++++ ++.+.+.... ....++ .++...+++..+++.+.+ ++..++++++.+++
T Consensus 215 ~dv~~~s~sK~l-~G~~gg~i~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 291 (402)
T cd00378 215 ADVVTTTTHKTL-RGPRGGLILTRKGELAKKINSAV--FPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKAL 291 (402)
T ss_pred CcEEEeccccCC-CCCCceEEEeccHHHHHHHHHHh--CccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 4765 678999 456677788877 8888775431 111111 122333333334443322 45778888999999
Q ss_pred HHhhhhcC
Q psy6205 217 HTPKKENN 224 (224)
Q Consensus 217 ~~~l~~l~ 224 (224)
.+.|+++|
T Consensus 292 ~~~L~~~g 299 (402)
T cd00378 292 AEALKERG 299 (402)
T ss_pred HHHHHhCC
Confidence 99887653
No 205
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=95.36 E-value=0.02 Score=51.44 Aligned_cols=72 Identities=14% Similarity=-0.006 Sum_probs=38.8
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDL 81 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~ 81 (224)
++||.|+||||+|+|+++|+..... +..+.......+.+..+..+..+-.++-.. +++..++.++.|++.
T Consensus 351 ~~~~~i~~vRg~Gl~~~ve~~~~~~--------~~~~~~~l~~~Gl~~~~~g~~i~~~Ppl~i--t~~ei~~~~~~l~~~ 420 (428)
T PRK07986 351 RDAPMVADVRVLGAIGVVETTRPVN--------MAALQRFFVEQGVWIRPFGKLIYLMPPYII--LPEQLQRLTAAVNRA 420 (428)
T ss_pred hcCCCEEeEeccceEEEEEeCCccc--------HHHHHHHHHHCCcEEEecCCEEEEeCCCCC--CHHHHHHHHHHHHHH
Confidence 3588999999999999999954211 112222222223333232232222111111 256667777777776
Q ss_pred HH
Q psy6205 82 IE 83 (224)
Q Consensus 82 ~~ 83 (224)
++
T Consensus 421 l~ 422 (428)
T PRK07986 421 VQ 422 (428)
T ss_pred Hh
Confidence 65
No 206
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=95.35 E-value=0.36 Score=42.90 Aligned_cols=78 Identities=24% Similarity=0.296 Sum_probs=47.8
Q ss_pred Cchh--cccccccCCcccccceec-HHHHHhhhcCCcccccCCCC-cHHHHHH-HHHHHHHHhh--hhHHHHHHHHHHHH
Q psy6205 144 PDIV--TVGKPMGNGHPVAAVITT-KEIAKSFQETGVEYFNTYGG-NPVSCAV-ANAVMEVLET--ENLREHALDVGNQL 216 (224)
Q Consensus 144 pDi~--~~~K~l~~G~p~~av~~~-~~i~~~~~~~~~~~~~T~~~-~p~~~aa-a~a~l~~~~~--~~l~~~~~~~g~~l 216 (224)
.|++ +++|+++ |.+.|+++++ +++.+.+.... ..++++. .+..+++ ..+.++.+++ +...++.+++.+++
T Consensus 219 ~di~~~S~~K~l~-g~~gg~i~~~~~~~~~~l~~~~--~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l 295 (416)
T PRK00011 219 ADVVTTTTHKTLR-GPRGGLILTNDEELAKKINSAV--FPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKAL 295 (416)
T ss_pred CcEEEecCCcCCC-CCCceEEEeCCHHHHHHHHHHh--CccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 4655 6899994 4556778885 68888775431 1112221 2223333 3444454432 45788899999999
Q ss_pred HHhhhhcC
Q psy6205 217 HTPKKENN 224 (224)
Q Consensus 217 ~~~l~~l~ 224 (224)
++.|+++|
T Consensus 296 ~~~L~~~g 303 (416)
T PRK00011 296 AEALAERG 303 (416)
T ss_pred HHHHHhCC
Confidence 99998753
No 207
>PRK02769 histidine decarboxylase; Provisional
Probab=95.27 E-value=0.29 Score=43.41 Aligned_cols=143 Identities=17% Similarity=0.134 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-----------HHhCCccccccchhhh--hcCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-----------VQVGFGRVGTHWWAFQ--LQGDD 141 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----------v~tG~GrtG~~~~~~~--~~g~~ 141 (224)
+++|++.++. .+.+...|++--...+-|.+.|-++..+.+++. .|.|+ ..- |.-. .+...
T Consensus 147 ~~~L~~~i~~---~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~-~~p---~~~~~~~~d~~ 219 (380)
T PRK02769 147 YDDLISKIKE---NKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGM-ILP---FVNNPPPFSFA 219 (380)
T ss_pred HHHHHHHHHh---CCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccce-eec---ccCccccCCcc
Confidence 4566666653 334566777777777789999988888888773 22221 110 0000 11100
Q ss_pred CCCchhccc--ccccCCcccccceecHHHHHhhhcCCc---ccccCCCCcH--HHHHHHHHHHHHHhhh---hHHHHHHH
Q psy6205 142 IIPDIVTVG--KPMGNGHPVAAVITTKEIAKSFQETGV---EYFNTYGGNP--VSCAVANAVMEVLETE---NLREHALD 211 (224)
Q Consensus 142 v~pDi~~~~--K~l~~G~p~~av~~~~~i~~~~~~~~~---~~~~T~~~~p--~~~aaa~a~l~~~~~~---~l~~~~~~ 211 (224)
...|.++++ |-+++-.+.|+++.+++..+.+..... ..-.|+.|.+ .+.++.-++|+.+.++ +..+++.+
T Consensus 220 ~~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~ 299 (380)
T PRK02769 220 DGIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLD 299 (380)
T ss_pred CCCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 136766653 544333889999999988776532210 1113445544 4566777888888654 45677889
Q ss_pred HHHHHHHhhhhcC
Q psy6205 212 VGNQLHTPKKENN 224 (224)
Q Consensus 212 ~g~~l~~~l~~l~ 224 (224)
+.++|.++|++.|
T Consensus 300 la~~l~~~L~~~g 312 (380)
T PRK02769 300 MAQYAVDRLQANG 312 (380)
T ss_pred HHHHHHHHHHhCC
Confidence 9999999998653
No 208
>PRK06460 hypothetical protein; Provisional
Probab=95.26 E-value=0.18 Score=44.47 Aligned_cols=123 Identities=11% Similarity=0.033 Sum_probs=73.5
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchh--cccccccC--Ccccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN--GHPVA 160 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~--G~p~~ 160 (224)
.++.+|++|......|.+.+.++..+.+++. |---++ ++ +...... ...|++ +++|.++| +.-.|
T Consensus 129 ~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivDea~~-~~---~~~~~l~--~~~divv~S~sK~l~G~~~~~~G 202 (376)
T PRK06460 129 KRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVDATFS-TP---INQKPLE--LGADIVVHSASKFLAGHNDVIAG 202 (376)
T ss_pred CCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcC-cc---ccCChhh--cCCCEEEeecceeccCCCCceEE
Confidence 3567899998888888888887776666665 100011 11 1111111 225766 58999974 23467
Q ss_pred cceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh
Q psy6205 161 AVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 161 av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~ 222 (224)
.+++++++++.+... ....+...+|..+..++..++.++. ..+++.+..+++.+.|++
T Consensus 203 ~~~~~~~l~~~l~~~--~~~~g~~~~~~~a~~~l~~~~~l~~--r~~~~~~n~~~l~~~L~~ 260 (376)
T PRK06460 203 LAAGYGKLLNVIDQM--RRTLGTSLDPHAAYLTLRGIKTLKI--RMDVINRNAEQIAEFLEG 260 (376)
T ss_pred EEecCHHHHHHHHHH--HHhcCCCCCHHHHHHHHhchhhHHH--HHHHHHHHHHHHHHHHHc
Confidence 788899998887643 1123444667666666666666642 355556666666666653
No 209
>PRK06767 methionine gamma-lyase; Provisional
Probab=95.26 E-value=0.068 Score=47.33 Aligned_cols=123 Identities=14% Similarity=0.045 Sum_probs=70.4
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchhc--ccccccC-Cccc-cc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN-GHPV-AA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~-G~p~-~a 161 (224)
+..+|++|-.....|.+.+.++..+.+++. |=.-|+ ++. . ..... .-.|+++ ++|.++| |-++ |+
T Consensus 146 ~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD~a~a-~~~-~--~~pl~--~g~Div~~S~sK~l~g~g~~~gG~ 219 (386)
T PRK06767 146 NTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFC-SPY-L--QRPLE--LGCDAVVHSATKYIGGHGDVVAGV 219 (386)
T ss_pred CceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEECCCc-ccc-c--CCchh--cCCcEEEecCcceecCCCCceeEE
Confidence 567899998777788877766666666655 111121 111 0 01111 2247764 5699987 5665 77
Q ss_pred ceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh
Q psy6205 162 VITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 162 v~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~ 222 (224)
++++++..+.+.........+ ..+|..+++++..|+.+. ...++.+++.+++.+.|++
T Consensus 220 v~~~~~~i~~~~~~~~~~~g~-~~~~~~a~l~~~~L~tl~--~r~~~~~~~a~~la~~L~~ 277 (386)
T PRK06767 220 TICKTRALAEKIRPMRKDIGG-IMAPFDAWLLLRGLKTLA--VRMDRHCDNAEKIVSFLKN 277 (386)
T ss_pred EEeChHHHHHHHHHHHHHhCC-CCCHHHHHHHHcCCCcHH--HHHHHHHHHHHHHHHHHHc
Confidence 888888776543221111111 236777777666666553 2456666777777777764
No 210
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=95.23 E-value=0.068 Score=46.14 Aligned_cols=72 Identities=17% Similarity=0.251 Sum_probs=53.1
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|||.+| .|+-+|.+++++++.+.+... ..++..++++.+++.++|+... .+...+++++.-+++.+.|+++
T Consensus 189 SfSK~~gl~GlRiG~~v~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~ 262 (330)
T PRK05664 189 SFGKFFGLAGARLGFVLAEPALLRALAEL----LGPWTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH 262 (330)
T ss_pred eccccccCCCcceEEEEeCHHHHHHHHHh----cCCCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 7999999 799999999999999888643 2345567777777777776432 2346667777777788777764
No 211
>PLN02651 cysteine desulfurase
Probab=95.13 E-value=0.14 Score=44.67 Aligned_cols=123 Identities=12% Similarity=0.029 Sum_probs=79.3
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhcc--cccccCCcccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTV--GKPMGNGHPVA 160 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~--~K~l~~G~p~~ 160 (224)
+...+++..+....|.+.|.++..+.+++. +|. +|.. .+-.+.+ .+|++++ -| ++|...+|
T Consensus 138 ~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~-~g~~---~~~~~~~----~~D~~~~s~hK-~~gp~G~g 208 (364)
T PLN02651 138 DTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQA-VGKI---PVDVDDL----GVDLMSISGHK-IYGPKGVG 208 (364)
T ss_pred CcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchh-hCCc---ccCcccC----CCCEEEechhh-hCCCCceE
Confidence 467888888888889998888777777776 333 2211 1122223 3698865 46 64335578
Q ss_pred cceecHHHHHhhhcCCc----cc-ccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhh
Q psy6205 161 AVITTKEIAKSFQETGV----EY-FNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 161 av~~~~~i~~~~~~~~~----~~-~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~ 222 (224)
++.++++..+.+..... .. ....+-|..++.+..++|+.+.+ +++.++.+++.++|.++|++
T Consensus 209 ~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~l~~ 277 (364)
T PLN02651 209 ALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNGLRA 277 (364)
T ss_pred EEEEcCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 89999876655432200 00 12234456678888888888854 45677888899999888864
No 212
>PRK07568 aspartate aminotransferase; Provisional
Probab=95.11 E-value=0.25 Score=43.47 Aligned_cols=72 Identities=17% Similarity=0.171 Sum_probs=46.0
Q ss_pred ccccccc-CCcccccceec-HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHhhhh
Q psy6205 148 TVGKPMG-NGHPVAAVITT-KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~-~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~~l~~ 222 (224)
++||.++ .|+.+|.+++. +++.+.+.... ..+++.++++..++.+.|+..+ -+.+.+++++.-+.+.+.|++
T Consensus 232 S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~---~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 307 (397)
T PRK07568 232 SVSKRYSACGARIGCLISKNKELIAAAMKLC---QARLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNK 307 (397)
T ss_pred cchhhccCCCcceEEEecCCHHHHHHHHHHh---hccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7899998 48999999984 78887664321 1245566666666666664321 123455566666677777764
No 213
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=95.08 E-value=0.2 Score=44.13 Aligned_cols=124 Identities=17% Similarity=0.163 Sum_probs=71.4
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-------HHhCCccccccchhhhhcCCCCCCch---hccccccc-CCccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDI---VTVGKPMG-NGHPV 159 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi---~~~~K~l~-~G~p~ 159 (224)
++.+|++.....-.|.+.+..++.+.++.. +...|...+. ... ... -.+.+ -+|+|.+| .|+-+
T Consensus 175 ~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~~~vi~DeaY~~~~~~~~-~~~--~~~--~~~~viv~~SfSK~~glaGlRi 249 (380)
T PLN03026 175 KPKLLFLTSPNNPDGSIISDDDLLKILELPILVVLDEAYIEFSTQES-RMK--WVK--KYDNLIVLRTFSKRAGLAGLRV 249 (380)
T ss_pred CCcEEEEeCCCCCCCCCCCHHHHHHHHhcCCEEEEECcchhhcCCcc-hHH--HHH--hCCCEEEEecchHhhcCccccc
Confidence 456666665555578776665554444321 2222211111 101 111 11232 27999998 78999
Q ss_pred ccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 160 AAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 160 ~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|.+++++++.+.+.... ..+.-+.++..++.++|+--+ -++..+.+++.-+++.+.|+++
T Consensus 250 Gy~~~~~~~i~~l~~~~----~~~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~ 310 (380)
T PLN03026 250 GYGAFPLSIIEYLWRAK----QPYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEV 310 (380)
T ss_pred eeeecCHHHHHHHHHhc----CCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99999999998876431 235567777777777774211 1234555666667777777654
No 214
>PRK08175 aminotransferase; Validated
Probab=95.06 E-value=0.3 Score=43.15 Aligned_cols=75 Identities=16% Similarity=0.202 Sum_probs=47.0
Q ss_pred hccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 147 VTVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 147 ~~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
-++||.+| .|+=+|.+++++++++.+... .....++.++.+..++.+.|+-.++ +.+.+++++.-+++.+.|+++
T Consensus 233 ~S~SK~~g~pGlRiG~~~~~~~l~~~~~~~--~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 310 (395)
T PRK08175 233 FTLSKSYNMAGWRIGFMVGNPELVSALARI--KSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEA 310 (395)
T ss_pred eeccccccCcchhheeeeCCHHHHHHHHHH--HhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 36899997 578889999999999987642 1123445555566666666643211 234455556666676666553
No 215
>PRK07503 methionine gamma-lyase; Provisional
Probab=95.03 E-value=0.13 Score=45.92 Aligned_cols=121 Identities=14% Similarity=0.110 Sum_probs=72.4
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchh--cccccccC-C-ccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN-G-HPVAA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~-G-~p~~a 161 (224)
++.+|++|......|.+.+-++..+.+++. |-.-+ .++. .....+ .-.|++ .++|.+++ | .-.|+
T Consensus 150 ~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD~a~-a~~~---~~~~l~--~g~Di~v~S~tK~l~g~gd~~gG~ 223 (403)
T PRK07503 150 KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVDNTY-CTPY---LQRPLE--LGADLVVHSATKYLGGHGDITAGL 223 (403)
T ss_pred cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEECCC-cccc---cCCchh--hCCCEEEccccccccCCCceeEEE
Confidence 567899987766678777766666666655 11101 1111 011112 336766 47899986 4 45677
Q ss_pred ceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHH
Q psy6205 162 VITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLH 217 (224)
Q Consensus 162 v~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~ 217 (224)
++.++++.+.+..........+..+|+.++.++..|+.+.. +...+++..+.++|.
T Consensus 224 v~~~~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~tl~~r~~~~~~na~~~a~~L~ 281 (403)
T PRK07503 224 VVGGKALADRIRLEGLKDMTGAVMSPFDAFLLMRGLKTLALRMDRHCASAQAVAEWLA 281 (403)
T ss_pred EEcCHHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHH
Confidence 88888888877532111123467789999999888888742 334455555555554
No 216
>PRK06234 methionine gamma-lyase; Provisional
Probab=95.03 E-value=0.13 Score=45.86 Aligned_cols=123 Identities=11% Similarity=0.047 Sum_probs=72.7
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-------HHhCCccccccchhhhhcCCCCCCchhc--ccccccC-Cccc-
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN-GHPV- 159 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~-G~p~- 159 (224)
+..+|++|......|.+.+.+++.+.+++. |-.-+ .++. . ....+ ...|+++ ++|.+++ |..+
T Consensus 149 ~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livDea~-~~~~-~--~~~l~--~g~Divv~S~sK~l~g~g~~~g 222 (400)
T PRK06234 149 NTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVDNTF-CTPY-I--QRPLQ--LGADVVVHSATKYLNGHGDVIA 222 (400)
T ss_pred CCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEECCC-Cchh-c--CCchh--hCCcEEEeeccccccCCCCcee
Confidence 467899997777788888766676666662 10001 0111 0 01111 2367764 6899986 5444
Q ss_pred ccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 160 AAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 160 ~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
|++++++++.+.+.........+...+|..++.++..|+-+.. ..++..++.+++.+.|+
T Consensus 223 G~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~tl~~--r~~~~~~na~~~a~~L~ 282 (400)
T PRK06234 223 GFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKTLQI--RMEKHCKNAMKVAKFLE 282 (400)
T ss_pred EEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHHHHH
Confidence 7788999988877532212224567889999988888876642 23333444444444444
No 217
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=94.97 E-value=0.037 Score=49.48 Aligned_cols=74 Identities=16% Similarity=0.180 Sum_probs=40.5
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCC-CccccCCCCCCCCCChhHHHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPC-PDVYRGKYPADKYPDEDLGVKYAQDVQDL 81 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~-P~~yr~~~~~~~~~~~~~~~~~~~~l~~~ 81 (224)
+|+.|++|||+|+|+|+||+.+.. ..+..+.......+.+..+. ++..|...+... +++..++.++.+++.
T Consensus 329 ~~~~i~~vrg~Gl~~~i~~~~~~~------~~a~~i~~~l~~~Gvlv~~~g~~~lRl~Ppl~i--t~eeid~~l~~l~~~ 400 (408)
T PRK04612 329 EFGVFAQVRGRGLMLGAVLAPAHA------GQAGAILDLAAEHGLLLLQAGPDVLRFVPALNL--TDAELADGLARLRLA 400 (408)
T ss_pred hCCCeeeeeccceEEEEEecCchh------hHHHHHHHHHHHCCeEEeeCCCCEEEEcCCccC--CHHHHHHHHHHHHHH
Confidence 478899999999999999974211 11112222222233333332 233333222111 256667778888777
Q ss_pred HHH
Q psy6205 82 IEA 84 (224)
Q Consensus 82 ~~~ 84 (224)
+..
T Consensus 401 l~~ 403 (408)
T PRK04612 401 LAD 403 (408)
T ss_pred HHH
Confidence 764
No 218
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=94.95 E-value=0.12 Score=45.75 Aligned_cols=120 Identities=13% Similarity=0.064 Sum_probs=72.8
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchhc--ccccccC-C-ccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN-G-HPVAA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~-G-~p~~a 161 (224)
+..+|++|......|.+.+-++..+.+++. |-.-+ -+|. .+--.. .-.|+++ +.|.++| + .-.|+
T Consensus 135 ~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD~t~-a~g~-~~~pl~----~gaDivv~S~tK~l~G~~d~~gG~ 208 (377)
T TIGR01324 135 NTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMIDNTW-AAGL-LFKPLE----HGVDISIQAGTKYLVGHSDIMIGT 208 (377)
T ss_pred CceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCC-cccc-ccCccc----cCceEEEecCceeccCCCCceEEE
Confidence 567899998877777777766777766665 11101 1221 111112 3378876 4899986 2 55677
Q ss_pred ceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-h-hhHHHHHHHHHHHHHH
Q psy6205 162 VITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-T-ENLREHALDVGNQLHT 218 (224)
Q Consensus 162 v~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~-~~l~~~~~~~g~~l~~ 218 (224)
++++++..+.+... ...+....+|..+...+..|+.+. + +...+++.++.++|.+
T Consensus 209 v~~~~~~~~~l~~~--~~~~G~~l~p~~a~~~~rgl~tl~~R~~~~~~~a~~la~~L~~ 265 (377)
T TIGR01324 209 VVANARTWDQLREH--SYLMGQMVDADDAYTTLRGLRTLGVRLKQHQESSLAIAKWLSE 265 (377)
T ss_pred EEeCHHHHHHHHHH--HHHhCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 88888877766532 223345567888877877777763 2 3445555555665554
No 219
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=94.95 E-value=0.028 Score=51.07 Aligned_cols=73 Identities=18% Similarity=0.243 Sum_probs=39.8
Q ss_pred CCC-cceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCC---CccccCCCCCCCCCChhHHHHHHHHH
Q psy6205 3 RYP-LIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPC---PDVYRGKYPADKYPDEDLGVKYAQDV 78 (224)
Q Consensus 3 ~~p-~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~---P~~yr~~~~~~~~~~~~~~~~~~~~l 78 (224)
+|| .|++|||.|+|+|+|++.+.. +..+....+..+++..+. .+..|...+... +++..++.++.|
T Consensus 376 ~~~~~i~~VrG~Gl~~giel~~~~~--------~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~--t~~~id~~l~~l 445 (459)
T PRK11522 376 EYPDLVQEARGKGMLMAIEFVDNEI--------GYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTL--TIEQCEQVLKAA 445 (459)
T ss_pred hCCCceeeEEeceeEEEEEecCchH--------HHHHHHHHHHCCeEEEecCCCCCEEEEECCccC--CHHHHHHHHHHH
Confidence 478 789999999999999975311 112222222223332221 122222111111 256677777888
Q ss_pred HHHHHHH
Q psy6205 79 QDLIEAM 85 (224)
Q Consensus 79 ~~~~~~~ 85 (224)
++.++.+
T Consensus 446 ~~~l~~~ 452 (459)
T PRK11522 446 RKALAAM 452 (459)
T ss_pred HHHHHHH
Confidence 7777654
No 220
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=94.88 E-value=0.35 Score=42.00 Aligned_cols=122 Identities=17% Similarity=0.218 Sum_probs=67.2
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchh---ccccccc-CCcc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIV---TVGKPMG-NGHP 158 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~---~~~K~l~-~G~p 158 (224)
++.++++...+.-.|...+.++..+.+++. +...|. +.... .... -.+.++ +|+|.++ .|+-
T Consensus 148 ~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~--~~~~~--~~~~--~~~~vi~~~S~SK~~~~~GlR 221 (351)
T PRK14807 148 QPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFY--GNTIV--DVIN--EFENLIVLRTLSKAFGLAGLR 221 (351)
T ss_pred CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhc--ccchH--HHhh--hCCCEEEEecchHhcccchhc
Confidence 566666665455578777766655555442 322231 21010 0011 112333 6899998 7999
Q ss_pred cccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh
Q psy6205 159 VAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 159 ~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~ 222 (224)
+|.+++++++.+.+.... ..+.-++++..++.+.|+--.-++..+++++.-+++.+.|++
T Consensus 222 iG~~v~~~~~~~~~~~~~----~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~ 281 (351)
T PRK14807 222 VGYAVANENILKYLNLVK----SPYNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSK 281 (351)
T ss_pred eeeeecCHHHHHHHHHcc----CCCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999886431 124446677666666664211122333444444556565543
No 221
>PLN02242 methionine gamma-lyase
Probab=94.84 E-value=0.13 Score=46.11 Aligned_cols=120 Identities=14% Similarity=0.066 Sum_probs=67.6
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchh--cccccccC-Ccc-
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN-GHP- 158 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~-G~p- 158 (224)
+..+|++|......|.+.+-+++.+.+++. +++.+ .+....+| .||+ +++|.+++ |..
T Consensus 163 ~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livDea~~~~------~~~~~~~g----~divv~S~SK~l~g~g~~~ 232 (418)
T PLN02242 163 KTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVDNTFAPM------VLSPARLG----ADVVVHSISKFISGGADII 232 (418)
T ss_pred CCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEECCCCcc------CCCHHHcC----CcEEEEeCccccCCCCCce
Confidence 478999998777788887766666666665 22111 01111223 4665 68999986 456
Q ss_pred cccceecHHHHHhhhcCCcccccCCCC---cHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 159 VAAVITTKEIAKSFQETGVEYFNTYGG---NPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 159 ~~av~~~~~i~~~~~~~~~~~~~T~~~---~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
.|++++++++++.+.... .....+.| .|..++...-.++.+ +...++.+++..++.+.|++.
T Consensus 233 gG~iv~~~~li~~l~~~~-~~~~~~~g~~~~~~~A~l~~~~l~tl--~~r~~~~~~~a~~la~~L~~~ 297 (418)
T PLN02242 233 AGAVCGPAELVNSMMDLH-HGALMLLGPTMNPKVAFELSERLPHL--SLRMKEHCRRAMEYAKRMKEL 297 (418)
T ss_pred EEEEEcCHHHHHHHHHHh-hhhhhccCCCCCHHHHHHHHcCCCcH--HHHHHHHHHHHHHHHHHHHhC
Confidence 477888999888876431 11011222 233333333222222 223456666777777777654
No 222
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=94.78 E-value=0.21 Score=43.75 Aligned_cols=121 Identities=16% Similarity=0.140 Sum_probs=73.8
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhccc--ccccCCcccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG--KPMGNGHPVA 160 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~--K~l~~G~p~~ 160 (224)
++..+++.-+....|.+.+.++..+.+++. +|+ +|.. -..... ..+|+++++ | +.|-..+|
T Consensus 136 ~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~-~g~~-----~~~~~~--~~~D~~~~s~~K-~~gp~G~g 206 (379)
T TIGR03402 136 DTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQA-VGKI-----PIDLKE--MNIDMLSLSGHK-LHGPKGVG 206 (379)
T ss_pred CcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECccc-cccc-----ccCccc--CCCCEEEEcHHH-cCCCCceE
Confidence 457788887888889988887777777766 433 3211 111111 458999999 9 65434567
Q ss_pred cceecHHHHHhhhcC---Cc-cc-ccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhh
Q psy6205 161 AVITTKEIAKSFQET---GV-EY-FNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 161 av~~~~~i~~~~~~~---~~-~~-~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~ 222 (224)
++..+++.. +.+. +. .. ....+-|..+..+..++++++.+ ++..++.+++.++++++|++
T Consensus 207 ~l~v~~~~~--~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l~~ 273 (379)
T TIGR03402 207 ALYIRKGTR--FRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLA 273 (379)
T ss_pred EEEECCCCC--CCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 787776542 2111 00 00 11233456667777778887754 34556778888888888764
No 223
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=94.78 E-value=0.046 Score=49.47 Aligned_cols=81 Identities=25% Similarity=0.309 Sum_probs=47.0
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCCC---ccccCCCCCCCCCChhHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPCP---DVYRGKYPADKYPDEDLGVKYAQDVQ 79 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~P---~~yr~~~~~~~~~~~~~~~~~~~~l~ 79 (224)
+||.+++|||.|+|++++++.+..+..|....+..+.......++...+.. +..|-.++... +++..++.++.|+
T Consensus 361 ~~~~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~~~~lrl~p~l~~--t~~~id~~l~~l~ 438 (451)
T PRK06918 361 KYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVI--TDEQLEEGLTIIE 438 (451)
T ss_pred hCCCceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCcc--CHHHHHHHHHHHH
Confidence 478889999999999999986655544433333344433333444444431 33332222111 2566667777777
Q ss_pred HHHHHH
Q psy6205 80 DLIEAM 85 (224)
Q Consensus 80 ~~~~~~ 85 (224)
+.++.+
T Consensus 439 ~~l~~~ 444 (451)
T PRK06918 439 ESLQAC 444 (451)
T ss_pred HHHHHH
Confidence 777654
No 224
>PRK09082 methionine aminotransferase; Validated
Probab=94.76 E-value=0.29 Score=43.08 Aligned_cols=74 Identities=12% Similarity=0.193 Sum_probs=49.0
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|||.+| .|+-+|++++++++++.+... .....++.++++..++.+.|+..++ +.+.+.+++.-+++.+.|++.
T Consensus 233 S~SK~~~~~G~RiG~iv~~~~l~~~~~~~--~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 309 (386)
T PRK09082 233 SFGKTYHVTGWKVGYCVAPAALSAEFRKV--HQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANS 309 (386)
T ss_pred echhhccchhhhhhhhhCCHHHHHHHHHH--HhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6899997 689999999999999887653 1224556677776666655542111 124445566777777777653
No 225
>PLN02409 serine--glyoxylate aminotransaminase
Probab=94.76 E-value=0.37 Score=42.80 Aligned_cols=139 Identities=10% Similarity=0.057 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHccCC-CCceEEEEccccCCCCcccCCHHHHHH--HHHH--------HHhCCccccccchhhhhcCCCCC
Q psy6205 75 AQDVQDLIEAMGRNG-KRPCAFFAESLQSCGGQIIPPANYLRE--VYKH--------VQVGFGRVGTHWWAFQLQGDDII 143 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~-~~iaavi~Epv~~~~G~~~~~~~~l~~--~~~~--------v~tG~GrtG~~~~~~~~~g~~v~ 143 (224)
.+++++.+.. .. .++.+|++--.....|.+.+.++.-+. +++. ++. +| ..-...+. ..
T Consensus 123 ~~~l~~~l~~---~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s-~g---~~~id~~~----~~ 191 (401)
T PLN02409 123 LDILKSKLRQ---DTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSS-IG---ALDFRMDE----WG 191 (401)
T ss_pred HHHHHHHHhh---CcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccc-cC---Cccccccc----cC
Confidence 4556655542 11 256677776555567888887777666 5544 332 22 10011112 23
Q ss_pred Cchhc--ccccccCCcccccceecHHHHHhhhcCC--ccc-----------cc---CCCCcHHHHHHHHHHHHHHhh---
Q psy6205 144 PDIVT--VGKPMGNGHPVAAVITTKEIAKSFQETG--VEY-----------FN---TYGGNPVSCAVANAVMEVLET--- 202 (224)
Q Consensus 144 pDi~~--~~K~l~~G~p~~av~~~~~i~~~~~~~~--~~~-----------~~---T~~~~p~~~aaa~a~l~~~~~--- 202 (224)
.|+++ ..|.+++..-+|.++.++++.+.+.... ..+ .. .++.|-....+..++|+.+.+
T Consensus 192 ~D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~ 271 (401)
T PLN02409 192 VDVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGL 271 (401)
T ss_pred ccEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhH
Confidence 57664 5899976434788999999888765321 000 11 234455677888888888754
Q ss_pred hhHHHHHHHHHHHHHHhhhhcC
Q psy6205 203 ENLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 203 ~~l~~~~~~~g~~l~~~l~~l~ 224 (224)
+++.++.+++.+++++.|+++|
T Consensus 272 e~i~~~~~~l~~~l~~~L~~~g 293 (401)
T PLN02409 272 ENVIARHARLGEATRLAVEAWG 293 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC
Confidence 4678889999999999988764
No 226
>PRK08960 hypothetical protein; Provisional
Probab=94.70 E-value=0.32 Score=42.78 Aligned_cols=79 Identities=14% Similarity=0.079 Sum_probs=49.1
Q ss_pred CCCchhc---cccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHH-Hhh--hhHHHHHHHHHH
Q psy6205 142 IIPDIVT---VGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEV-LET--ENLREHALDVGN 214 (224)
Q Consensus 142 v~pDi~~---~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~-~~~--~~l~~~~~~~g~ 214 (224)
+.+++++ ++|.+| .|+-+|.+++++++.+.+... ....+.+.+.++-.++.+.|+- .++ ..+.+.+++.-+
T Consensus 222 ~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~--~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~ 299 (387)
T PRK08960 222 VDDDAFVLNSFSKYFGMTGWRLGWLVAPPAAVPELEKL--AQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRD 299 (387)
T ss_pred ccCCEEEEeecccccCCcccEEEEEEcCHHHHHHHHHH--HhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHH
Confidence 4466654 899997 789999999999998877542 1223445567776667666642 110 123334445555
Q ss_pred HHHHhhhh
Q psy6205 215 QLHTPKKE 222 (224)
Q Consensus 215 ~l~~~l~~ 222 (224)
.+.+.|++
T Consensus 300 ~l~~~L~~ 307 (387)
T PRK08960 300 FLLPALRE 307 (387)
T ss_pred HHHHHHHh
Confidence 56666654
No 227
>PRK05942 aspartate aminotransferase; Provisional
Probab=94.58 E-value=0.32 Score=42.93 Aligned_cols=76 Identities=16% Similarity=0.165 Sum_probs=50.4
Q ss_pred hhccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhh
Q psy6205 146 IVTVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 146 i~~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~ 222 (224)
+-+|||.+| .|+-+|.+++++++.+.+... .....++.+.++..++.++|+..++ +...+++++.-+++.+.|++
T Consensus 238 ~~SfSK~~~~~GlRiG~i~~~~~l~~~l~~~--~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~ 315 (394)
T PRK05942 238 FHTLSKTYNMAGWRVGFVVGNRHIIQGLRTL--KTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGE 315 (394)
T ss_pred EecchhccCChhhheeeeecCHHHHHHHHHH--HhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457999997 678899999999999988643 1112344555666666677754322 24556666667777777765
Q ss_pred c
Q psy6205 223 N 223 (224)
Q Consensus 223 l 223 (224)
.
T Consensus 316 ~ 316 (394)
T PRK05942 316 L 316 (394)
T ss_pred C
Confidence 3
No 228
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=94.44 E-value=0.35 Score=42.73 Aligned_cols=124 Identities=10% Similarity=0.029 Sum_probs=74.7
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhccc--ccccCCcccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG--KPMGNGHPVA 160 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~--K~l~~G~p~~ 160 (224)
+..+|++.-+....|.+.+.++..+.+++. ++. +|.. ...... ..+|+++++ |.+|- .-+|
T Consensus 160 ~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~-~g~~-----~~~~~~--~~~d~~~~s~~K~~gp-~G~G 230 (401)
T PRK10874 160 RTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQG-AVHF-----PADVQA--LDIDFYAFSGHKLYGP-TGIG 230 (401)
T ss_pred CcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcc-cccc-----cCCchh--cCCCEEEEecccccCC-CccE
Confidence 455677766777788888877777777776 321 2211 111111 348888776 96541 1247
Q ss_pred cceecHHHHHhhhcCC---cc---------------cc-cCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHH
Q psy6205 161 AVITTKEIAKSFQETG---VE---------------YF-NTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQLHT 218 (224)
Q Consensus 161 av~~~~~i~~~~~~~~---~~---------------~~-~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~~ 218 (224)
.+.+++++.+.+.... .. .. .+-+-|..+.++..++++.+++ ++..++.+++.+++.+
T Consensus 231 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~ 310 (401)
T PRK10874 231 VLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAED 310 (401)
T ss_pred EEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 7889999887664210 00 00 0112344566667777777654 3567788888899998
Q ss_pred hhhhc
Q psy6205 219 PKKEN 223 (224)
Q Consensus 219 ~l~~l 223 (224)
.|+++
T Consensus 311 ~l~~~ 315 (401)
T PRK10874 311 ALAKL 315 (401)
T ss_pred HHhcC
Confidence 88764
No 229
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=94.43 E-value=0.051 Score=48.73 Aligned_cols=21 Identities=33% Similarity=0.635 Sum_probs=19.0
Q ss_pred CCCcceeeccCCceeEEEEee
Q psy6205 3 RYPLIGDVRGIGLFVGVELVT 23 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~ 23 (224)
+||.+.++||.|+|.++||..
T Consensus 340 ~~p~v~~vrG~Gl~~~ie~~~ 360 (421)
T PRK09792 340 SVPAIAAVRGLGSMIAAEFND 360 (421)
T ss_pred hCCCcceecccceEEEEEecC
Confidence 489899999999999999974
No 230
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=94.43 E-value=0.17 Score=45.03 Aligned_cols=123 Identities=14% Similarity=0.040 Sum_probs=68.4
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH----HHhCCccccccchhhhhcCCCCCCchhc--ccccccC-Ccccc-c
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH----VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN-GHPVA-A 161 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~-G~p~~-a 161 (224)
++..+|++|-.....|.+.+-++..+.+++. |.=.--.++. +..... .-.|+++ ++|.++| |..+| +
T Consensus 149 ~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD~a~a~~~-~~~~~~----~gaDivv~S~sK~l~g~g~~~GG~ 223 (398)
T PRK07504 149 PNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVDNVFATPL-FQKPLE----LGAHIVVYSATKHIDGQGRCLGGV 223 (398)
T ss_pred cCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEECCccccc-cCCchh----hCCCEEEeeccccccCCccceEEE
Confidence 3567899998777778777755555555554 1000001111 111112 2367765 6899976 66775 5
Q ss_pred ceecHHHHHh-hhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 162 VITTKEIAKS-FQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 162 v~~~~~i~~~-~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
++++++..+. +... ........+|..++.++..|+.+.. ..++-.++.+++.+.|+
T Consensus 224 vv~~~~~i~~~~~~~--~~~~g~~~s~~~A~~~l~~L~tl~~--R~~~~~~na~~la~~L~ 280 (398)
T PRK07504 224 VLSDKAWIEEHLQDY--FRHTGPSLSPFNAWTLLKGLETLPV--RVRQQTESAAAIADFLA 280 (398)
T ss_pred EEeCcHHHHHHHHHH--HHHhCCCCCHHHHHHHHhccchHHH--HHHHHHHHHHHHHHHHH
Confidence 6677665542 3221 1112345789999999999988843 23333344444444444
No 231
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=94.41 E-value=0.55 Score=42.45 Aligned_cols=147 Identities=16% Similarity=0.103 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-HHhCCc------c-ccccchhh----hhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-VQVGFG------R-VGTHWWAF----QLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-v~tG~G------r-tG~~~~~~----~~~g~~v 142 (224)
+++|++.+.. .+...++.|.+|=.....|-.+.+...+++++++ -..|.- | .|..+|-- .+.+..+
T Consensus 156 ~~~Le~aI~~--~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i 233 (450)
T TIGR02618 156 LKKLQKLIDE--VGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSI 233 (450)
T ss_pred HHHHHHHhcc--ccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCH
Confidence 5667766652 2334566666665444433356777888999888 111110 0 00000100 0111001
Q ss_pred ---------CCchhcccccccC-Cccccccee--cHHHHHhhhcCCcc--cccCCCCcHH-HHHHHHHHHHHHhhhhHHH
Q psy6205 143 ---------IPDIVTVGKPMGN-GHPVAAVIT--TKEIAKSFQETGVE--YFNTYGGNPV-SCAVANAVMEVLETENLRE 207 (224)
Q Consensus 143 ---------~pDi~~~~K~l~~-G~p~~av~~--~~~i~~~~~~~~~~--~~~T~~~~p~-~~aaa~a~l~~~~~~~l~~ 207 (224)
--|. +++|+.-. +.|+|.+++ ++++++.....-.. -+-||++=.. .++|..-.|+...++...+
T Consensus 234 ~ei~~e~~~~aD~-~~~S~~Kd~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~~ 312 (450)
T TIGR02618 234 AEILKEMMSYADG-CTMSGKKDCLVNIGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYIE 312 (450)
T ss_pred HHHHHHHhccCcE-EEEeeccCCCCCCceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHHH
Confidence 2355 67777754 468888887 78888776543111 2357777443 4444444566665556666
Q ss_pred HHHHHHHHHHHhhhhcC
Q psy6205 208 HALDVGNQLHTPKKENN 224 (224)
Q Consensus 208 ~~~~~g~~l~~~l~~l~ 224 (224)
+.....++|.++|++.|
T Consensus 313 ~r~~~a~~La~~L~~~G 329 (450)
T TIGR02618 313 HRVKQVRYLGDKLKAAG 329 (450)
T ss_pred HHHHHHHHHHHHHHHCC
Confidence 66666777777777654
No 232
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=94.33 E-value=0.48 Score=41.46 Aligned_cols=72 Identities=14% Similarity=0.160 Sum_probs=47.9
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHH--h-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVL--E-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~--~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|||.+| .|+-+|.+++++++.+.+... ..+++.+.++..++.+.|+-= + -.+..+++++.-+++.+.|+++
T Consensus 217 SfSK~~gl~GlRvGy~v~~~~l~~~l~~~----~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 292 (364)
T PRK04781 217 TLSKAHALAAARIGSLIANAELIAVLRRC----QAPYPVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQL 292 (364)
T ss_pred cChhhcccccceeeeeeCCHHHHHHHHhc----cCCCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 7999999 799999999999999988643 235666777777776666431 1 1122334455556666666654
No 233
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=94.22 E-value=1 Score=40.70 Aligned_cols=146 Identities=14% Similarity=0.084 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-HHhCCc--cccccch--hh-------hhcCCC-
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-VQVGFG--RVGTHWW--AF-------QLQGDD- 141 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-v~tG~G--rtG~~~~--~~-------~~~g~~- 141 (224)
+++|++.|+.. +++++..++++-.-...|-.+.|.+.+++++++ -..|.- --|.-+| ++ ...+..
T Consensus 169 l~~le~~I~~~--g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si 246 (467)
T TIGR02617 169 LEGLERGIEEV--GPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSI 246 (467)
T ss_pred HHHHHHHHhhc--CCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCH
Confidence 56777777632 346788888776655555567788999999999 111110 0011011 00 011100
Q ss_pred --------CCCchh--cccccccCCccccccee-cHH----HHHhhhcCC--cccccCCCCcHHHHHHHHH-HHHHHhhh
Q psy6205 142 --------IIPDIV--TVGKPMGNGHPVAAVIT-TKE----IAKSFQETG--VEYFNTYGGNPVSCAVANA-VMEVLETE 203 (224)
Q Consensus 142 --------v~pDi~--~~~K~l~~G~p~~av~~-~~~----i~~~~~~~~--~~~~~T~~~~p~~~aaa~a-~l~~~~~~ 203 (224)
-.-|.+ +++|+++ .|+|.+++ +++ +++...... ...+-||+|=.----.|+| .|+...++
T Consensus 247 ~eI~rE~~~~aDsvt~slsKglg--ApvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~ 324 (467)
T TIGR02617 247 EQITRETYKYADMLAMSAKKDAM--VPMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNL 324 (467)
T ss_pred HHHHHHhhccCCEEEEEcCCCCC--CcccceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccH
Confidence 124544 5788765 45444444 433 333322211 1234788886654444444 46655555
Q ss_pred hHHHHHHHHHHHHHHhhhhcC
Q psy6205 204 NLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 204 ~l~~~~~~~g~~l~~~l~~l~ 224 (224)
+++..=-..-+||.++|++.|
T Consensus 325 ~yl~~ri~qv~yl~~~L~~~G 345 (467)
T TIGR02617 325 DWLAYRINQVQYLVNGLEEIG 345 (467)
T ss_pred HHHHHHHHHHHHHHHHHHhCC
Confidence 544444444567777777654
No 234
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=94.20 E-value=0.31 Score=42.76 Aligned_cols=76 Identities=11% Similarity=0.078 Sum_probs=47.1
Q ss_pred hhccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhh
Q psy6205 146 IVTVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 146 i~~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~ 222 (224)
+-+|||.+| .|+=+|.+++++++.+.+.... . ..+.+.+++...++.+.|+..++ +++.+++++.-+++.+.|++
T Consensus 234 ~~S~SK~~g~~GlRiG~~i~~~~l~~~~~~~~-~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 311 (385)
T PRK09276 234 FHSLSKTYNMTGWRIGFAVGNADLIAGLGKVK-S-NVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRK 311 (385)
T ss_pred EecchhhcCCcchhheeeeCCHHHHHHHHHHH-h-hccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 448999997 5888899999999998876431 1 12223345555555555542211 23455566666777777765
Q ss_pred c
Q psy6205 223 N 223 (224)
Q Consensus 223 l 223 (224)
+
T Consensus 312 ~ 312 (385)
T PRK09276 312 L 312 (385)
T ss_pred C
Confidence 3
No 235
>PRK08912 hypothetical protein; Provisional
Probab=94.18 E-value=0.1 Score=45.95 Aligned_cols=74 Identities=16% Similarity=0.201 Sum_probs=50.4
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
++||.+| .|+-+|.+++++++.+.+... ....+++.++...+++.+.|...++ +++.+++++.-+++.+.|++.
T Consensus 229 S~SK~~g~~GlRiG~~~~~~~~~~~l~~~--~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 305 (387)
T PRK08912 229 SAGKIFSLTGWKVGFVCAAPPLLRVLAKA--HQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRI 305 (387)
T ss_pred echhhccCcCceeEEEecCHHHHHHHHHH--HhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6899999 899999999999999887643 2223466666666666665532111 245666777777787777654
No 236
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=94.16 E-value=0.11 Score=45.71 Aligned_cols=72 Identities=19% Similarity=0.195 Sum_probs=55.9
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
||||+.| .|+=+|.+++++++.+.+... ...|+-|-++.+++.++|+--+ -+...+++.+.-++|.+.|+.+
T Consensus 209 TfSKa~gLAGlRlGy~ia~~~~i~~l~~v----r~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~ 282 (356)
T COG0079 209 TFSKAFGLAGLRVGYAIANPELIAALNKV----RPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKAL 282 (356)
T ss_pred ecHHhhhcchhceeeccCCHHHHHHHHHh----cCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 7999999 688899999999999999753 3567778889999988876552 2345666777777787777765
No 237
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=94.15 E-value=0.31 Score=43.41 Aligned_cols=121 Identities=14% Similarity=0.079 Sum_probs=71.3
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchh--cccccccC-Cccc-cc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN-GHPV-AA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~-G~p~-~a 161 (224)
+..+|++|-.....|.+.+-+...+.+++. |-.-++ ++. ...... ...|++ +++|.++| |-.+ |+
T Consensus 149 ~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD~t~a-~~~---~~~~l~--~~~Divv~S~sK~l~g~~~~~gG~ 222 (398)
T PRK08249 149 GCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVDNTFA-TPI---NQNPLA--LGADLVIHSATKFLSGHADALGGV 222 (398)
T ss_pred CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCcC-ccc---cCCchh--hCCCEEeccCceecCCCCCceEEE
Confidence 567888987666678887766666655555 111111 111 011111 236766 57899986 4333 55
Q ss_pred ceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 162 VITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 162 v~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
+++++++++.+... ........+|..++.++..|+.+.. ..++..++.+.+.+.|+
T Consensus 223 vv~~~~l~~~l~~~--~~~~g~~~s~~~a~l~l~~l~tL~~--R~~~~~~na~~la~~L~ 278 (398)
T PRK08249 223 VCGSKELMEQVYHY--REINGATMDPMSAYLILRGMKTLKL--RVRQQQESAMALAKYLQ 278 (398)
T ss_pred EECCHHHHHHHHHH--HHhcCCCCCHHHHHHHHhCcchHHH--HHHHHHHHHHHHHHHHH
Confidence 67788888877533 2224556788889888888888843 23444455555555554
No 238
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=94.11 E-value=0.04 Score=49.77 Aligned_cols=22 Identities=41% Similarity=0.771 Sum_probs=19.4
Q ss_pred CCC-cceeeccCCceeEEEEeec
Q psy6205 3 RYP-LIGDVRGIGLFVGVELVTC 24 (224)
Q Consensus 3 ~~p-~v~~vRg~Gl~~gielv~~ 24 (224)
+|| .|++|||.|+|.||||+++
T Consensus 369 ~~~~~i~~vRG~Gl~~giel~~~ 391 (442)
T TIGR03372 369 EYPDLIIEARGKGLLMAIEFRDN 391 (442)
T ss_pred hCCCceEEEecceEEEEEEeCCh
Confidence 478 7899999999999999764
No 239
>PRK07049 methionine gamma-lyase; Validated
Probab=94.11 E-value=0.39 Score=43.22 Aligned_cols=126 Identities=15% Similarity=0.018 Sum_probs=72.0
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH-H-H-hCCcc-c-cc--cchhhhhcCCCCCCchh--cccccccC--Ccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH-V-Q-VGFGR-V-GT--HWWAFQLQGDDIIPDIV--TVGKPMGN--GHP 158 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-v-~-tG~Gr-t-G~--~~~~~~~~g~~v~pDi~--~~~K~l~~--G~p 158 (224)
+++.+|++|....-.|.+.+.+++.+.++.. - + .+.-- . .. ....+.-.. ...||+ +++|.++| |+-
T Consensus 173 ~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl~--~g~divv~S~SK~~gG~~glr 250 (427)
T PRK07049 173 GRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLE--HGADLSVYSLTKYVGGHSDLV 250 (427)
T ss_pred CCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCccc--cCCCEEEEcCceeecCCCCcE
Confidence 4678999997666688777666665555541 0 0 01000 0 00 000011111 225766 68999995 688
Q ss_pred cccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 159 VAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 159 ~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
+|++++++++.+.+... ........+|..+.+++..|+.+.. .+++..+..+.+.+.|+
T Consensus 251 ~G~vv~~~~l~~~l~~~--~~~~g~~ls~~~a~l~~r~L~tl~~--R~~~~~~~a~~la~~L~ 309 (427)
T PRK07049 251 AGAVLGRKALIRQVRAL--RSAIGTQLDPHSCWMLGRSLETLVL--RMERANRNARAVAEFLR 309 (427)
T ss_pred EEEEECCHHHHHHHHHH--HHhcCCCCCHHHHHHHHcCCChHHH--HHHHHHHHHHHHHHHHH
Confidence 89999999988877642 1122345778888888888876632 13333444444444444
No 240
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=94.10 E-value=0.092 Score=47.20 Aligned_cols=79 Identities=23% Similarity=0.346 Sum_probs=41.6
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCC---CccccCCCCCCCCCChhHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPC---PDVYRGKYPADKYPDEDLGVKYAQDVQ 79 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~---P~~yr~~~~~~~~~~~~~~~~~~~~l~ 79 (224)
+||.+.++||.|+|+|+|++.+. +.+.......+.......+++..+. .+..|..++... +++..++.++.|+
T Consensus 349 ~~~~~~~vrg~Gl~~gi~~~~~~--~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~lRl~p~~~~--t~~~i~~~~~~l~ 424 (433)
T PRK08117 349 KHPVIGDVRGIGLMIGIEIVDPD--GEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPPLTV--TKEEIDEGLDILD 424 (433)
T ss_pred cCCceeeeecCCcEEEEEEecCC--CCcchHHHHHHHHHHHHCCCEEeecCCCCCEEEEeCCccC--CHHHHHHHHHHHH
Confidence 47888999999999999998643 2222222222222222233333222 123332211111 2566667777777
Q ss_pred HHHHHH
Q psy6205 80 DLIEAM 85 (224)
Q Consensus 80 ~~~~~~ 85 (224)
+.++.+
T Consensus 425 ~~l~~~ 430 (433)
T PRK08117 425 EALTEY 430 (433)
T ss_pred HHHHHH
Confidence 766543
No 241
>PRK08361 aspartate aminotransferase; Provisional
Probab=94.08 E-value=0.3 Score=43.05 Aligned_cols=73 Identities=14% Similarity=0.151 Sum_probs=45.4
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHhhhh
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET----ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~----~~l~~~~~~~g~~l~~~l~~ 222 (224)
+++|.+| .|+-+|.+++++++.+.+... ....+++.+++...++.+.|+.-.. +...++.++.-+.+.+.|++
T Consensus 234 s~SK~~~~~GlRiG~~~~~~~~~~~~~~~--~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 311 (391)
T PRK08361 234 SFSKTFAMTGWRLGFVIAPEQVIKDMIKL--HAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKE 311 (391)
T ss_pred cCchhcCCcHhhhhhhccCHHHHHHHHHH--HhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6899998 688899999999998876532 1123445566666666666642111 12344455555666666654
No 242
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=94.00 E-value=0.84 Score=40.70 Aligned_cols=124 Identities=13% Similarity=0.144 Sum_probs=77.8
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchh--cccccccCCcccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGNGHPVA 160 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~G~p~~ 160 (224)
++..|++.-+....|.+.|.++..+.+++. ++ ++|..- .-.+. ..+|++ .+.|..| .--+|
T Consensus 173 ~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~-~~g~~~---~~~~~----~~~d~~~~s~~K~~g-p~G~G 243 (424)
T PLN02855 173 KTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQ-SVPHMP---VDVQT----LGADFLVASSHKMCG-PTGIG 243 (424)
T ss_pred CceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhh-hcCCcC---CCchh----cCCCEEEeecccccC-CCccE
Confidence 566777877777889888887777777776 33 233211 11122 237877 5689433 12368
Q ss_pred cceecHHHHHhhhcC---Ccc----c------------ccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHH
Q psy6205 161 AVITTKEIAKSFQET---GVE----Y------------FNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQLHT 218 (224)
Q Consensus 161 av~~~~~i~~~~~~~---~~~----~------------~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~~ 218 (224)
++.+++++.+.+... +.. + +..-+-|..+.++..++|+.+.+ +.+.++.+++.++|++
T Consensus 244 ~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~ 323 (424)
T PLN02855 244 FLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYE 323 (424)
T ss_pred EEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHH
Confidence 889999887766421 000 0 01112455677777788887754 4677888899999999
Q ss_pred hhhhc
Q psy6205 219 PKKEN 223 (224)
Q Consensus 219 ~l~~l 223 (224)
.|+++
T Consensus 324 ~L~~~ 328 (424)
T PLN02855 324 KLSSV 328 (424)
T ss_pred HHhcC
Confidence 88764
No 243
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=93.96 E-value=0.13 Score=44.55 Aligned_cols=75 Identities=21% Similarity=0.209 Sum_probs=52.0
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++|.++ .|+-+|.+++++++.+.+.... ....+++.++++.+++.+.|+.-+ -++..+++++.-+++.+.|+++
T Consensus 207 S~SK~~~~~GlR~G~~~~~~~~~~~l~~~~-~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 283 (353)
T PRK05387 207 TFSKSRSLAGLRVGFAIGHPELIEALNRVK-NSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL 283 (353)
T ss_pred ehhHhhcchhhhceeeecCHHHHHHHHHhh-ccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 5899998 7888999999999998876431 122456677888877777774211 1245566667777777777654
No 244
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=93.87 E-value=0.18 Score=43.58 Aligned_cols=72 Identities=13% Similarity=0.235 Sum_probs=48.0
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhhhhc
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|||.++ .|+-+|.+++++++++.+.... .+++.++++..++.++|+..+. ++..+.+++.-+++.+.|+++
T Consensus 199 S~SK~~~l~GlRvG~~v~~~~~~~~l~~~~----~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 272 (335)
T PRK14808 199 TFSKAFSLAAQRIGYVVSSEKFIDAYNRVR----LPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM 272 (335)
T ss_pred echhhccCcccceEEEEeCHHHHHHHHHhc----CCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 6899999 7899999999999999886431 2455567777777777764321 222334444445666666654
No 245
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=93.60 E-value=0.12 Score=46.58 Aligned_cols=72 Identities=13% Similarity=0.025 Sum_probs=39.2
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLI 82 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~ 82 (224)
+||.|++|||.|+|++||+..... +..+.......+.+..+..+..|...+-.- +++..++.++-|++.+
T Consensus 354 ~~~~v~~vRg~Gl~~~iel~~~~~--------~~~i~~~l~e~Gi~v~~~g~~l~~~Ppl~i--t~~ei~~~~~~l~~~l 423 (429)
T PRK06173 354 EFDSVAEVRVLGAIGVVEMKEPVN--------MATLQPRFVEHGIWVRPFGKLVYIMPPFII--SPDELSQLTSGLLRVL 423 (429)
T ss_pred cCCCeeeeeccceEEEEEeCCccc--------HHHHHHHHHHCCeEEEecCCEEEEeCCccC--CHHHHHHHHHHHHHHH
Confidence 578899999999999999953211 111222222223333332233332222111 2566677777787777
Q ss_pred HH
Q psy6205 83 EA 84 (224)
Q Consensus 83 ~~ 84 (224)
..
T Consensus 424 ~~ 425 (429)
T PRK06173 424 KQ 425 (429)
T ss_pred HH
Confidence 64
No 246
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=93.56 E-value=0.17 Score=42.86 Aligned_cols=137 Identities=9% Similarity=0.066 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhC-CccccccchhhhhcCCCCCCc
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVG-FGRVGTHWWAFQLQGDDIIPD 145 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG-~GrtG~~~~~~~~~g~~v~pD 145 (224)
.+++++.++. +++.-+.++..|.. .|.+.+.++..+.+++. +... +.-.+. + -..... ...|
T Consensus 142 ~~~l~~~l~~---~~~~k~v~l~~p~~--~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~-~-~~~~~~--~~~d 212 (294)
T cd00615 142 PETFKKALIE---HPDAKAAVITNPTY--YGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPI-L-PSSAAM--AGAD 212 (294)
T ss_pred HHHHHHHHHh---CCCceEEEEECCCC--CCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcc-c-Ccchhh--cCCc
Confidence 4556665542 33333445555643 68777766677776665 2211 100111 0 000111 2367
Q ss_pred hh--cccccccCCccccc-ceecHHHH--HhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHH
Q psy6205 146 IV--TVGKPMGNGHPVAA-VITTKEIA--KSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHT 218 (224)
Q Consensus 146 i~--~~~K~l~~G~p~~a-v~~~~~i~--~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~ 218 (224)
++ ++.|.++ |++.++ +..+++.. +.+... .....|.+-+...+++..++++++.+ +++.+++.++.+++++
T Consensus 213 iv~~S~hK~l~-g~~~~~~l~~~~~~~~~~~~~~~-~~~~~ttsps~~~~asl~~a~~~~~~~g~~~~~~~~~~~~~~r~ 290 (294)
T cd00615 213 IVVQSTHKTLP-ALTQGSMIHVKGDLVNPDRVNEA-LNLHQSTSPSYLILASLDVARAMMALEGKELVEELIELALYARQ 290 (294)
T ss_pred EEEEchhcccc-hHhHHHHHHhCCCcCCHHHHHHH-HHHHCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 76 5789884 343333 33443321 112211 12335667788888888888888853 4688899999999999
Q ss_pred hhhh
Q psy6205 219 PKKE 222 (224)
Q Consensus 219 ~l~~ 222 (224)
+|++
T Consensus 291 ~l~~ 294 (294)
T cd00615 291 EINK 294 (294)
T ss_pred HHhC
Confidence 8864
No 247
>PRK10534 L-threonine aldolase; Provisional
Probab=93.49 E-value=0.16 Score=43.67 Aligned_cols=75 Identities=12% Similarity=0.068 Sum_probs=43.2
Q ss_pred hhcccccccCCcccc-cceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhcC
Q psy6205 146 IVTVGKPMGNGHPVA-AVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 146 i~~~~K~l~~G~p~~-av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l~ 224 (224)
+++++|+.+ .++| ++++++++.+.+..........+.-+.++.+++.++|+.. ...+++..+.-++|.+.|+++|
T Consensus 192 ~~s~SK~~~--~~~G~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~--~~~~~~~~~~r~~l~~~L~~~g 267 (333)
T PRK10534 192 TICLSKGLG--TPVGSLLVGNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHN--VARLQEDHDNAAWLAEQLREAG 267 (333)
T ss_pred EEEeEcCCC--CcccceEEcCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHhCC
Confidence 457999765 3567 4778999998876421111112233445667777777542 2233334444567778777653
No 248
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=93.42 E-value=0.37 Score=42.74 Aligned_cols=119 Identities=19% Similarity=0.110 Sum_probs=66.0
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH----H-HhCCccccccchhhhhcCCCCCCchhc--ccccccC-Cccc-cc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH----V-QVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN-GHPV-AA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----v-~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~-G~p~-~a 161 (224)
+..+|++|......|.+.+.++..+.+++. | -.-+ .++. . ..-.. .-.|+++ ++|.+++ |..+ |+
T Consensus 146 ~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD~t~-~~~~-~--~~pl~--~g~Divv~S~sK~~~g~g~~~GG~ 219 (390)
T PRK08133 146 NTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCF-CTPA-L--QQPLK--LGADVVIHSATKYLDGQGRVLGGA 219 (390)
T ss_pred CCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEECCC-cccc-c--CCchh--hCCcEEEeecceeecCCcceEeEE
Confidence 567899997766678877766666666665 1 0001 1111 0 01011 2357764 6899976 5666 56
Q ss_pred ceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHH
Q psy6205 162 VITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLH 217 (224)
Q Consensus 162 v~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~ 217 (224)
+++++++.+.+... ........+|..+..++..|+.+.. +...+++..+.+.|.
T Consensus 220 vv~~~~~~~~~~~~--~~~~g~~~~~~~a~~~l~gl~tl~~R~~~~~~~a~~la~~L~ 275 (390)
T PRK08133 220 VVGSKELMEEVFGF--LRTAGPTLSPFNAWVFLKGLETLSLRMEAHSANALALAEWLE 275 (390)
T ss_pred EEcCHHHHHHHHHH--HHHhCCCCCHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH
Confidence 66777776655422 1112334567777777777666532 234445555555444
No 249
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=93.31 E-value=0.13 Score=46.21 Aligned_cols=77 Identities=21% Similarity=0.215 Sum_probs=39.9
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCCC---ccccCCCCCCCCCChhHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPCP---DVYRGKYPADKYPDEDLGVKYAQDVQ 79 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~P---~~yr~~~~~~~~~~~~~~~~~~~~l~ 79 (224)
+||.+.+|||.|+|+++|+.. +.+..+....+..+.......++...+.. ++.|..++... +++..++.++.|+
T Consensus 340 ~~~~i~~vrg~G~~~~i~~~~-~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~lr~~ppl~i--~~~~i~~~~~~l~ 416 (421)
T PRK06777 340 SCPAIVDIRARGSMVAVEFND-PQTGKPSPEFTRQYQRQALEEGLLLLSCGVHGNVIRFLYPLTI--PDAQFSKALNILT 416 (421)
T ss_pred hCCCeEEecCceEEEEEEEec-CccCCccHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCCC--CHHHHHHHHHHHH
Confidence 478899999999999999964 22222322233333333223344444431 33333322111 2455555555555
Q ss_pred HHH
Q psy6205 80 DLI 82 (224)
Q Consensus 80 ~~~ 82 (224)
+.+
T Consensus 417 ~~l 419 (421)
T PRK06777 417 RLL 419 (421)
T ss_pred HHH
Confidence 443
No 250
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=93.31 E-value=0.88 Score=39.44 Aligned_cols=74 Identities=11% Similarity=-0.036 Sum_probs=45.5
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++|.+| .|+=+|.+++++++.+.+... ....+.+.++++.+++.+.+..-+ -....+++++.-+.+.+.|++.
T Consensus 203 s~SK~~g~~GlRiG~~~~~~~~~~~~~~~--~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~ 278 (350)
T TIGR03537 203 SLSKRSGMTGYRSGFVAGDEKLISFLRKL--RANFGVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV 278 (350)
T ss_pred ecccccCCccccceeeecCHHHHHHHHHH--HHhhccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 5799996 578888899999998887642 112334445566666666554110 1234555666666676666653
No 251
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=93.30 E-value=0.12 Score=46.29 Aligned_cols=48 Identities=31% Similarity=0.409 Sum_probs=29.2
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecC
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAP 51 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp 51 (224)
+||.+.+|||.|+|.++|++. +.+..|....+..+.......++...|
T Consensus 339 ~~~~~~~vrg~G~~~~i~~~~-~~~~~~~~~~~~~l~~~~~~~Gv~i~p 386 (420)
T TIGR00700 339 VDPRIGDVRGLGAMIAVELVD-PGTTEPDAGLAERIATAAHAAGLLLLT 386 (420)
T ss_pred hCCCEEEeeccceEEEEEEec-CCCCCccHHHHHHHHHHHHHCCeEEec
Confidence 478899999999999999974 333334333334444333333444444
No 252
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=93.26 E-value=0.18 Score=38.04 Aligned_cols=72 Identities=15% Similarity=0.145 Sum_probs=48.3
Q ss_pred CCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhccc--ccccCCc
Q psy6205 88 NGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG--KPMGNGH 157 (224)
Q Consensus 88 ~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~--K~l~~G~ 157 (224)
...+++++++++.....|...+.++..+.+++. .+.++..... . ..... ..+|+++.| |.+++ .
T Consensus 89 ~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~-~--~~~~~--~~~d~~~~s~~K~~~~-~ 162 (170)
T cd01494 89 AKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAP-G--VLIPE--GGADVVTFSLHKNLGG-E 162 (170)
T ss_pred ccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEeccccccccccc-c--ccccc--ccCCEEEEEcccccCC-C
Confidence 356899999999999888877776666666665 5554433321 1 11112 458999988 99987 6
Q ss_pred ccccceec
Q psy6205 158 PVAAVITT 165 (224)
Q Consensus 158 p~~av~~~ 165 (224)
..|+++++
T Consensus 163 ~~G~l~~~ 170 (170)
T cd01494 163 GGGVVIVK 170 (170)
T ss_pred ceEEEEeC
Confidence 66666653
No 253
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=93.14 E-value=0.13 Score=46.07 Aligned_cols=79 Identities=20% Similarity=0.328 Sum_probs=44.5
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCC---CccccCCCCCCCCCChhHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPC---PDVYRGKYPADKYPDEDLGVKYAQDVQ 79 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~---P~~yr~~~~~~~~~~~~~~~~~~~~l~ 79 (224)
++|.+.++||.|++++++|..+..++.|....+..+...+...+....+. ++..|-.++... +++..++.++.|+
T Consensus 341 ~~~~~~~v~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~~~~iRl~~~~~~--t~~ei~~~i~~l~ 418 (425)
T PRK08088 341 KHPEIGDVRGLGAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPYYNVLRILVPLTI--EDAQIRQGLEIIA 418 (425)
T ss_pred hCCCeEEEeccceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCc--CHHHHHHHHHHHH
Confidence 47888999999999999998765555443333333444433334333322 233342222111 2555666666666
Q ss_pred HHHH
Q psy6205 80 DLIE 83 (224)
Q Consensus 80 ~~~~ 83 (224)
+.++
T Consensus 419 ~~l~ 422 (425)
T PRK08088 419 QCFD 422 (425)
T ss_pred HHHH
Confidence 6665
No 254
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=93.10 E-value=0.16 Score=44.14 Aligned_cols=72 Identities=13% Similarity=0.095 Sum_probs=47.0
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHhhhhc
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETE---NLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~---~l~~~~~~~g~~l~~~l~~l 223 (224)
+|+|.+| .|+-+|.+++++++.+.+... ...|..+.++.++|.+.|+.-..+ +..+.+.+.-+++.+.|+++
T Consensus 210 SfSK~~glaGlRiGy~i~~~~~i~~l~~~----~~~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 285 (351)
T PRK01688 210 TLSKAFALAGLRCGFTLANEEVINLLLKV----IAPYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEI 285 (351)
T ss_pred cchHhhcCHHHHHhHHhCCHHHHHHHHhc----cCCCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6899998 688899999999999888643 223556666777777776521111 22334444456677777654
No 255
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=92.95 E-value=1.3 Score=39.72 Aligned_cols=128 Identities=19% Similarity=0.174 Sum_probs=65.8
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH---HHhCCc--cccccchhhhhcCCCCCCchhcc-----ccccc-CCcc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH---VQVGFG--RVGTHWWAFQLQGDDIIPDIVTV-----GKPMG-NGHP 158 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~---v~tG~G--rtG~~~~~~~~~g~~v~pDi~~~-----~K~l~-~G~p 158 (224)
+++++|++... ...|.+.+.++..+.+++. +..+.- ..|. + ...+ ....|+++. ||... +|.-
T Consensus 203 ~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~~~g~-~---~~~~-~~~~D~~~~s~~k~~~~~~~~Gpg 276 (447)
T PRK00451 203 DDTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPVSLGL-L---KPPG-EYGADIVVGEGQPLGIPLSFGGPY 276 (447)
T ss_pred CCeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChHHhcc-C---CCcc-cCCCCEEEECCCcCCCCCCCCCCC
Confidence 35677777653 5678887766666666655 111100 0111 1 0011 234687754 45533 3334
Q ss_pred cccceecHHHHHhhhcC-------------------------Ccccc-cCCCCc-HHHHHHHHHHHHHHhh---hhHHHH
Q psy6205 159 VAAVITTKEIAKSFQET-------------------------GVEYF-NTYGGN-PVSCAVANAVMEVLET---ENLREH 208 (224)
Q Consensus 159 ~~av~~~~~i~~~~~~~-------------------------~~~~~-~T~~~~-p~~~aaa~a~l~~~~~---~~l~~~ 208 (224)
+|.+.+++++.+.+... .+... .++..+ ++...++.+.|+.+.+ +...++
T Consensus 277 ~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~ 356 (447)
T PRK00451 277 LGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQ 356 (447)
T ss_pred chHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHH
Confidence 66788888888764210 00111 122222 1222233334554433 356778
Q ss_pred HHHHHHHHHHhhhhc
Q psy6205 209 ALDVGNQLHTPKKEN 223 (224)
Q Consensus 209 ~~~~g~~l~~~l~~l 223 (224)
..++.+++.++|+++
T Consensus 357 ~~~~~~~l~~~L~~~ 371 (447)
T PRK00451 357 NHQKAHYLAERLAEI 371 (447)
T ss_pred HHHHHHHHHHHHhhc
Confidence 888999999999875
No 256
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=92.85 E-value=0.58 Score=41.73 Aligned_cols=119 Identities=16% Similarity=0.082 Sum_probs=68.8
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchhc--ccccccC-Cccc-cc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN-GHPV-AA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~-G~p~-~a 161 (224)
+..+|++|......|.+.+-+++.+.+++. |-.-+ -++. .+..-.+| .|+++ +.|.++| |-.+ |+
T Consensus 155 ~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD~a~-a~~~-~~~~~~~g----aDivv~S~tK~l~g~g~~~gG~ 228 (403)
T PRK07810 155 PTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLDNVF-ATPL-LQRGLPLG----ADVVVYSGTKHIDGQGRVLGGA 228 (403)
T ss_pred CceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCC-Cccc-cCChhhcC----CcEEEccCCceecCCcCceeEE
Confidence 567899998777788777766676666665 11112 1221 11011123 57764 7899976 5444 66
Q ss_pred ceecHHHHH-hhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHH
Q psy6205 162 VITTKEIAK-SFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLH 217 (224)
Q Consensus 162 v~~~~~i~~-~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~ 217 (224)
++++++..+ .+... ........+|..++.++..|+.+.. +...+++.++.++|.
T Consensus 229 v~~~~~~~~~~l~~~--~~~~g~~~s~~~a~l~l~~L~tl~~R~~~~~~~a~~~a~~L~ 285 (403)
T PRK07810 229 ILGDREYIDGPVQKL--MRHTGPALSAFNAWVLLKGLETLALRVRHSNASALRIAEFLE 285 (403)
T ss_pred EEeChHHHHHHHHHH--HHHhCCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHh
Confidence 777877554 23211 1112345789999999999888853 233444444444443
No 257
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=92.83 E-value=0.14 Score=45.82 Aligned_cols=74 Identities=15% Similarity=0.064 Sum_probs=39.0
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLI 82 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~ 82 (224)
++|.|.++||.|+|+++++..+... ..+..+.......+++..+..+..|...+... +++..+..++.|++.+
T Consensus 348 ~~~~i~~vrg~Gl~~~i~l~~~~~~-----~~~~~l~~~l~~~Gv~v~~~~~~lR~~p~l~~--t~edId~~v~~l~~al 420 (423)
T PRK05964 348 DLPGVADVRVLGAIGAVELDRPVLE-----RDGPALRAFALERGVLLRPLGNTIYLMPPYII--TAEELDRITDAIVEVA 420 (423)
T ss_pred cCCCeEEeecccEEEEEEeccCcch-----hHHHHHHHHHHHCCeEEEecCCEEEEeCCccc--CHHHHHHHHHHHHHHH
Confidence 4788899999999999999643310 11112222222233333333233332211111 2566667777777666
Q ss_pred H
Q psy6205 83 E 83 (224)
Q Consensus 83 ~ 83 (224)
+
T Consensus 421 ~ 421 (423)
T PRK05964 421 D 421 (423)
T ss_pred h
Confidence 4
No 258
>PRK04311 selenocysteine synthase; Provisional
Probab=92.45 E-value=0.99 Score=41.13 Aligned_cols=104 Identities=14% Similarity=0.203 Sum_probs=56.6
Q ss_pred CceEEEEccccC--CCC--cccCCHHHHHHHHHH-----HHhCCccccccc--hh-------hhhcCCCCCCchhccc--
Q psy6205 91 RPCAFFAESLQS--CGG--QIIPPANYLREVYKH-----VQVGFGRVGTHW--WA-------FQLQGDDIIPDIVTVG-- 150 (224)
Q Consensus 91 ~iaavi~Epv~~--~~G--~~~~~~~~l~~~~~~-----v~tG~GrtG~~~--~~-------~~~~g~~v~pDi~~~~-- 150 (224)
+.++|+++-... ..| ...+-+++.+..++. |-.|.|-.+. . |+ .+... .-.|++++|
T Consensus 216 ~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~-~~~~gl~~~p~~~~~l~--~GaDiv~fSg~ 292 (464)
T PRK04311 216 NTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVD-LSQYGLPDEPTVQELLA--AGVDLVTFSGD 292 (464)
T ss_pred cCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCccccc-chhccCCCCCchhhHHh--cCCcEEEecCc
Confidence 467777765432 233 345666777777776 3334443331 1 10 11111 237999988
Q ss_pred ccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHH
Q psy6205 151 KPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVL 200 (224)
Q Consensus 151 K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~ 200 (224)
|.+||.. .|++++++++.+.+... ...-++.-+-...++-.++|..+
T Consensus 293 K~LgGp~-~G~i~g~~~li~~l~~~--~~~r~lr~dk~~l~~l~~~l~~~ 339 (464)
T PRK04311 293 KLLGGPQ-AGIIVGKKELIARLKKH--PLKRALRVDKLTLAALEATLRLY 339 (464)
T ss_pred ccccCCc-eEEEEEcHHHHHHHhhc--hhHHHHhcchHHHHHHHHHHHHH
Confidence 9998653 56788999998877643 12222222334444555555533
No 259
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=92.45 E-value=0.63 Score=41.23 Aligned_cols=117 Identities=13% Similarity=0.058 Sum_probs=68.6
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HH-hCCccccccchhhhhcCCCCCCchh--cccccccC-Ccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQ-VGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN-GHP 158 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~-tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~-G~p 158 (224)
++.+|++|......|.+.+.++..+.+++. .+ +|+. .+ .. .+| .|++ .+.|.++| |-.
T Consensus 137 ~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD~t~a~~~~--~~---~l-~~G----aDivv~S~sK~l~g~~d~ 206 (385)
T PRK08574 137 RTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVDNTFATPLL--YR---PL-RHG----ADFVVHSLTKYIAGHNDV 206 (385)
T ss_pred CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCCCcccc--CC---hh-hhC----CcEEEeeCceeecCCCCc
Confidence 577889998887788888766666666665 21 2221 00 01 123 5766 47999976 433
Q ss_pred c-cccee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 159 V-AAVIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 159 ~-~av~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
+ |++++ ++++.+.+... ....+...+|..++.++..|+.+.. ..++..++..++.+.|+
T Consensus 207 ~gG~vi~~~~~~~~~~~~~--~~~~g~~~~p~~a~l~l~~l~tL~~--R~~~~~~na~~la~~L~ 267 (385)
T PRK08574 207 VGGVAVAWSGEFLEELWEW--RRRLGTIMQPFEAYLVLRGLKTLEV--RFERQCRNAMAIAEFLS 267 (385)
T ss_pred eeEEEEECcHHHHHHHHHH--HHhcCCCCCHHHHHHHHcccCcHHH--HHHHHHHHHHHHHHHHH
Confidence 3 43454 67777765432 1123455678888888888887753 23333344444444444
No 260
>PRK14012 cysteine desulfurase; Provisional
Probab=92.36 E-value=0.86 Score=40.36 Aligned_cols=123 Identities=11% Similarity=0.060 Sum_probs=69.6
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhccc--ccccCCcccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG--KPMGNGHPVA 160 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~--K~l~~G~p~~ 160 (224)
+..+|++..+....|.+.+-++..+.+++. +++ +|..- .-.. . ..+|+++++ |.+|. ..+|
T Consensus 144 ~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~-~g~~~---~~~~--~--~~~D~~~~s~~K~~gp-~g~G 214 (404)
T PRK14012 144 DTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQS-VGKVP---IDLS--K--LKVDLMSFSAHKIYGP-KGIG 214 (404)
T ss_pred CCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchh-cCCcc---cCcc--c--CCCCEEEEehhhccCC-CceE
Confidence 456888888888889888876666666665 332 32211 0111 1 348999887 97653 2467
Q ss_pred cceecHHHHHhhhcC--Cccc---ccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHhhhh
Q psy6205 161 AVITTKEIAKSFQET--GVEY---FNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 161 av~~~~~i~~~~~~~--~~~~---~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~~l~~ 222 (224)
+++++++....+... +... ....+-+...+.+..++++.++ .+...++.+++.+++.+.|++
T Consensus 215 ~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~ 283 (404)
T PRK14012 215 ALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWNGIKD 283 (404)
T ss_pred EEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc
Confidence 788876643322211 0000 0011123333444445666553 235677888899999888865
No 261
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=92.35 E-value=0.44 Score=41.07 Aligned_cols=71 Identities=7% Similarity=-0.025 Sum_probs=44.5
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|||.++ .|+-+|.+++++++.+.+... ..++..+..+.++ +...+.-. .++..+..++.-+++.+.|+++
T Consensus 190 SfSK~~~l~GlRiGy~v~~~~li~~l~~~----~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 262 (332)
T PRK06425 190 SLTKILGIPSLRIGYIATDDYNMKISRKI----TEPWSVCDPAIDF-IRSIDLDYVAKHSLDIMENERSYLINNLEAM 262 (332)
T ss_pred ecHHhcCCchhhheeeecCHHHHHHHHHc----CCCCccCHHHHHH-HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 6899999 899999999999999888642 1233334443332 22222100 1245666677777777777654
No 262
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=92.34 E-value=0.37 Score=41.97 Aligned_cols=71 Identities=13% Similarity=0.081 Sum_probs=47.8
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhh
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~ 222 (224)
+|||.++ .|+-+|.+++++++++.+... ...++-+.++..++.+.|+--. .+...+.+++.-+++.+.|++
T Consensus 213 S~SK~~~l~GlRiG~~v~~~~~~~~~~~~----~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 285 (360)
T PRK07392 213 SLTKFYSLPGLRLGYAIAHPDRLQRWQQW----RDPWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLAS 285 (360)
T ss_pred echhhhcCCchheeeeeCCHHHHHHHHhh----CCCCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6899999 899999999999999887632 1346677888888777775211 112233444555556666654
No 263
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=92.30 E-value=1.4 Score=38.53 Aligned_cols=123 Identities=15% Similarity=0.087 Sum_probs=71.0
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhccc--ccccCCcc-c
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG--KPMGNGHP-V 159 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~--K~l~~G~p-~ 159 (224)
+...|++.-.....|.+.+.++..+.+++. ++. +|..- ..... ..+|+++++ |-. |.| +
T Consensus 140 ~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~-~g~~~---~~~~~----~~~D~~~~s~~K~~--gp~G~ 209 (382)
T TIGR03403 140 KTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQA-IGKIP---VDVQK----AGVDFLSFSAHKFH--GPKGV 209 (382)
T ss_pred CCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhh-cCCCc---cCccc----cCCCEEEEcchhhC--CCCce
Confidence 346777877777889888877666666665 322 22110 11111 337999888 953 322 5
Q ss_pred ccceecHHHH--HhhhcCC-cccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 160 AAVITTKEIA--KSFQETG-VEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 160 ~av~~~~~i~--~~~~~~~-~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
|++..+++.. ..+.... ..-....+-|..+..++.++|+.+++ +...++++++.++|.++|+++
T Consensus 210 g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L~~~ 278 (382)
T TIGR03403 210 GGLYIRKGVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLEL 278 (382)
T ss_pred EEEEECCCCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcC
Confidence 6676665531 0010000 00012344667777777778877654 345677888888888888754
No 264
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=92.10 E-value=1.8 Score=43.16 Aligned_cols=141 Identities=11% Similarity=0.072 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH----HHhCCccccc-cchhhhhcCCCCCCchhcc
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH----VQVGFGRVGT-HWWAFQLQGDDIIPDIVTV 149 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----v~tG~GrtG~-~~~~~~~~g~~v~pDi~~~ 149 (224)
+++|++.++ .+.+++++|++--.-..+|...+-++..+.+++. +.-|---.+. ..-.-.. .-.|++++
T Consensus 653 le~L~~~i~---~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~----~GaD~~~~ 725 (993)
T PLN02414 653 IEELRKAAE---AHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGF----IGADVCHL 725 (993)
T ss_pred HHHHHHHHh---ccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccc----cCCCEEEe
Confidence 566666664 3445788888875555577777767777777665 1011100000 0000011 23688766
Q ss_pred --ccccc-----CCcccccceecHHHHHhhhcCC-----------c-ccccC----CCCcHHHHHHHHHHHHHHhhhhH-
Q psy6205 150 --GKPMG-----NGHPVAAVITTKEIAKSFQETG-----------V-EYFNT----YGGNPVSCAVANAVMEVLETENL- 205 (224)
Q Consensus 150 --~K~l~-----~G~p~~av~~~~~i~~~~~~~~-----------~-~~~~T----~~~~p~~~aaa~a~l~~~~~~~l- 205 (224)
.|.++ ||--+|.+.+++++...+.... . ....| +.|+.+.+.++..-+..+=.+++
T Consensus 726 s~HK~f~~P~G~GGPg~G~l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~ 805 (993)
T PLN02414 726 NLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLT 805 (993)
T ss_pred cCCccCCcCcccCCCCeeeEEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHH
Confidence 68665 3345888888988877664321 0 00133 44666777777777777766666
Q ss_pred --HHHHHHHHHHHHHhhhh
Q psy6205 206 --REHALDVGNQLHTPKKE 222 (224)
Q Consensus 206 --~~~~~~~g~~l~~~l~~ 222 (224)
.+++..+..|++++|++
T Consensus 806 ~~a~~a~~nAnYl~~rL~~ 824 (993)
T PLN02414 806 DASKIAILNANYMAKRLEG 824 (993)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 77788899999999865
No 265
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=92.02 E-value=3.7 Score=36.46 Aligned_cols=139 Identities=12% Similarity=0.105 Sum_probs=85.7
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-------HHhCCccccccchhhhhcCCCCCCchh
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDIV 147 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi~ 147 (224)
.+++++.+++ + .++.+|.+==.=.+.|++.|.++.-+.+++. -.|.||=. .+-.+.|| -|++
T Consensus 119 p~~v~~~L~~---~-~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~---~~~vd~wg----iDv~ 187 (383)
T COG0075 119 PEEVEEALDK---D-PDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGE---PLKVDEWG----IDVA 187 (383)
T ss_pred HHHHHHHHhc---C-CCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCCc---ccchhhcC----ccEE
Confidence 4566666652 2 3443333221223468888888888888888 23334322 23455666 5666
Q ss_pred cc--cccccCCcccccceecHHHHHhhhcCCcc----------------cccCCCCcHHHHHHHHHHHHHHhhh---hHH
Q psy6205 148 TV--GKPMGNGHPVAAVITTKEIAKSFQETGVE----------------YFNTYGGNPVSCAVANAVMEVLETE---NLR 206 (224)
Q Consensus 148 ~~--~K~l~~G~p~~av~~~~~i~~~~~~~~~~----------------~~~T~~~~p~~~aaa~a~l~~~~~~---~l~ 206 (224)
+- =|+|++=--+|.+..+++..+.+...... ..+-|+-+....-+-.++|+.|.++ +..
T Consensus 188 itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~ 267 (383)
T COG0075 188 ITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARI 267 (383)
T ss_pred EecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHH
Confidence 54 48998611236689999998887643111 1122333344566667899999765 567
Q ss_pred HHHHHHHHHHHHhhhhcC
Q psy6205 207 EHALDVGNQLHTPKKENN 224 (224)
Q Consensus 207 ~~~~~~g~~l~~~l~~l~ 224 (224)
++=+.+++.+++.++++|
T Consensus 268 ~RH~~~~~a~r~~~~alG 285 (383)
T COG0075 268 ARHRRLAEALRAGLEALG 285 (383)
T ss_pred HHHHHHHHHHHHHHHHcC
Confidence 777889999999999876
No 266
>PRK05957 aspartate aminotransferase; Provisional
Probab=91.94 E-value=1.5 Score=38.55 Aligned_cols=75 Identities=11% Similarity=0.069 Sum_probs=44.2
Q ss_pred hhccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHhhhh
Q psy6205 146 IVTVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 146 i~~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~~l~~ 222 (224)
+-++||.+| .|+-+|++++++++++.+... ....+.+.+.++..++..+|+.=. -++..+++++.-+++.+.|++
T Consensus 228 ~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~--~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~ 305 (389)
T PRK05957 228 LYSLSKAYGFASWRIGYMVIPIHLLEAIKKI--QDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQ 305 (389)
T ss_pred EecchhhccCccceeEEEecCHHHHHHHHHH--HhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 346999997 689999999999999988643 111223334455555555553200 012334455555556666654
No 267
>PRK09105 putative aminotransferase; Provisional
Probab=91.93 E-value=0.52 Score=41.38 Aligned_cols=75 Identities=13% Similarity=0.090 Sum_probs=49.1
Q ss_pred Cchh---ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHH
Q psy6205 144 PDIV---TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHT 218 (224)
Q Consensus 144 pDi~---~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~ 218 (224)
++++ +|||.+| .|+-+|.+++++++.+.+... .++..+..+..++.+.|+.-+ -+...+++++.-+++.+
T Consensus 223 ~~vi~~~SfSK~~g~~GlRiG~~v~~~~~i~~l~~~-----~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~ 297 (370)
T PRK09105 223 KDLIVLRTFSKLYGMAGMRLGLAAARPDLLAKLARF-----GHNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIA 297 (370)
T ss_pred CCEEEEecccHhhcCCccceeeeecCHHHHHHHHhc-----CCCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 4544 6899998 689999999999999887642 234455666666666664211 12334556666666777
Q ss_pred hhhhc
Q psy6205 219 PKKEN 223 (224)
Q Consensus 219 ~l~~l 223 (224)
.|+++
T Consensus 298 ~L~~~ 302 (370)
T PRK09105 298 WLKKK 302 (370)
T ss_pred HHHHC
Confidence 77654
No 268
>PRK07337 aminotransferase; Validated
Probab=91.92 E-value=1.8 Score=38.04 Aligned_cols=78 Identities=13% Similarity=0.125 Sum_probs=47.9
Q ss_pred Cchh---ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHH--Hh-hhhHHHHHHHHHHHH
Q psy6205 144 PDIV---TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEV--LE-TENLREHALDVGNQL 216 (224)
Q Consensus 144 pDi~---~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~--~~-~~~l~~~~~~~g~~l 216 (224)
++++ +++|.++ .|+=+|.+++++++.+.+... ......+.++++..++.+.++- ++ -....+++++.-+++
T Consensus 222 ~~vi~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~--~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~ 299 (388)
T PRK07337 222 DDVITINSFSKYFNMTGWRLGWLVVPEALVGTFEKL--AQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFI 299 (388)
T ss_pred CCEEEEEechhhcCCchhheeeeecCHHHHHHHHHH--HHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHH
Confidence 4554 5799997 688889999999998887642 1112334566666666666531 11 122345555666666
Q ss_pred HHhhhhc
Q psy6205 217 HTPKKEN 223 (224)
Q Consensus 217 ~~~l~~l 223 (224)
.+.|+++
T Consensus 300 ~~~L~~~ 306 (388)
T PRK07337 300 VPALESL 306 (388)
T ss_pred HHHHHhc
Confidence 6666653
No 269
>PRK08636 aspartate aminotransferase; Provisional
Probab=91.89 E-value=2.9 Score=36.98 Aligned_cols=73 Identities=18% Similarity=0.212 Sum_probs=41.9
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhh
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~ 222 (224)
++||.+| .|+-+|.+++++++.+.+... .....++.++++..++...++-.++ +.+.+..++.-+.+.+.|++
T Consensus 245 S~SK~~~~~GlRiG~iv~~~~li~~~~~~--~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 320 (403)
T PRK08636 245 TLSKSYNMAGWRVGFVVGNKKLVGALKKI--KSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFAN 320 (403)
T ss_pred ecccccCCccceeeeeeCCHHHHHHHHHH--HHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4899997 689999999999999887642 1112334444444444444432111 12333344455555555554
No 270
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=91.71 E-value=0.37 Score=42.29 Aligned_cols=76 Identities=11% Similarity=0.067 Sum_probs=46.6
Q ss_pred hhccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhh
Q psy6205 146 IVTVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 146 i~~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~ 222 (224)
+-+|||.+| .|+-+|.+++++++.+.+.... . ..+.+.++++..++.+.|+-.++ +++.+++++.-+.+.+.|++
T Consensus 232 ~~SfSK~~g~~GlRiG~~i~~~~l~~~~~~~~-~-~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~ 309 (383)
T TIGR03540 232 FHSLSKTYNMTGWRIGMAVGNADLIAGLGKVK-T-NVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKK 309 (383)
T ss_pred EEecccccCCccceeeEEeCCHHHHHHHHHHH-H-hcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 347999997 6888999999999988876421 1 12223344555555555543211 23445566666667777665
Q ss_pred c
Q psy6205 223 N 223 (224)
Q Consensus 223 l 223 (224)
.
T Consensus 310 ~ 310 (383)
T TIGR03540 310 I 310 (383)
T ss_pred C
Confidence 4
No 271
>PRK12414 putative aminotransferase; Provisional
Probab=91.70 E-value=0.33 Score=42.78 Aligned_cols=74 Identities=11% Similarity=0.114 Sum_probs=49.7
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVL-ETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~-~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
++||.+| .|+=+|.+++++++.+.+... ....+++.+.++..++.+.|+-= ....+.+.+++.-+.+.+.|++.
T Consensus 232 SfSK~~~~pGlRiG~~v~~~~l~~~l~~~--~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 307 (384)
T PRK12414 232 SFGKSYHVTGWRVGYCLAPAELMDEIRKV--HQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS 307 (384)
T ss_pred cccccccCccceEEEEecCHHHHHHHHHH--HhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 5899997 789999999999998887643 22246666777777766666320 01134555666667777777653
No 272
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=91.64 E-value=2.4 Score=37.18 Aligned_cols=79 Identities=9% Similarity=-0.022 Sum_probs=43.8
Q ss_pred Cchhcc--cccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHh
Q psy6205 144 PDIVTV--GKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTP 219 (224)
Q Consensus 144 pDi~~~--~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~ 219 (224)
.|++++ .|.++|. ..|++++++++.+.+..........+......+++..++++.+.+ .+..++..+.-+++.++
T Consensus 200 ~D~~~~S~~K~l~gp-~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~ 278 (363)
T TIGR01437 200 ADLVIYSGAKAIEGP-TSGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEA 278 (363)
T ss_pred CCEEEEeCCcccCCC-ceEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHH
Confidence 488765 5988654 377788888887765321101111111112335566667776643 23344444455578888
Q ss_pred hhhc
Q psy6205 220 KKEN 223 (224)
Q Consensus 220 l~~l 223 (224)
|+++
T Consensus 279 L~~i 282 (363)
T TIGR01437 279 LNTL 282 (363)
T ss_pred HhcC
Confidence 8764
No 273
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=91.63 E-value=0.44 Score=42.61 Aligned_cols=73 Identities=14% Similarity=0.056 Sum_probs=47.7
Q ss_pred cccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--h--hhHHHHHHHHHHHHHHhhhh
Q psy6205 148 TVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--T--ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 148 ~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~--~~l~~~~~~~g~~l~~~l~~ 222 (224)
+|||.++.|+-+|.+++++++.+.+... ....+++.+.++..++.+.|+-=+ + ..+.+.+++.-+.+.+.|++
T Consensus 279 SfSK~~~~GlRiG~~i~~~~~~~~~~~~--~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~ 355 (431)
T PRK15481 279 SVSKALGPDLRLAFVASDSATSARLRLR--LNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQ 355 (431)
T ss_pred eeccccCCCceeEEEeCCHHHHHHHHHH--HhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6999999899999999999998888532 122345567777777777774311 0 12344455555555555554
No 274
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=91.43 E-value=0.32 Score=42.72 Aligned_cols=71 Identities=15% Similarity=0.112 Sum_probs=47.3
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhh
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~ 222 (224)
+|||.+| .|+-+|.+++.+++.+.+... ..+++-++++.+++.+.|+--+ .+.+.+..++.-+++.+.|++
T Consensus 219 SfSK~~~l~GlRiG~~i~~~~~~~~l~~~----~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~ 291 (366)
T PRK01533 219 TFSKAYGLASFRVGYAVGHEELIEKLNVV----RLPFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKE 291 (366)
T ss_pred CchHHhcChHHHHhHHhCCHHHHHHHHHh----cCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6899999 789999999999999988643 2457788888888888884210 112233333444444454444
No 275
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=91.32 E-value=0.37 Score=41.89 Aligned_cols=72 Identities=11% Similarity=0.107 Sum_probs=46.4
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHH--hh-hhHHHHHHHHHHHHHHhhhhc
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVL--ET-ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~--~~-~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++|.+| .|+-+|.+++++++.+.+... ...++.+.....++.+.|+.- +. +...+++++.-+++.+.|+++
T Consensus 211 S~SK~~~l~GlRlG~~i~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 286 (354)
T PRK04635 211 TLSKAFALAGARCGFTLANEELIEILMRV----IAPYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMY 286 (354)
T ss_pred chHHHhhhhHHHHhhhhCCHHHHHHHHhh----cCCCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 7999998 688889999999999887532 123455556666666666421 11 123344555567777777654
No 276
>PRK07681 aspartate aminotransferase; Provisional
Probab=91.27 E-value=0.52 Score=41.69 Aligned_cols=75 Identities=16% Similarity=0.115 Sum_probs=47.8
Q ss_pred hccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 147 VTVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 147 ~~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
-+|||.++ .|+-+|.+++++++.+.+... ....+++.+.++..++.+.|+.-.+ +...+.+++.-+++.+.|++.
T Consensus 235 ~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~--~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 312 (399)
T PRK07681 235 NSLSKSYSLAGSRIGYMIGNEEIVRALTQF--KSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF 312 (399)
T ss_pred eecccccCCccceeEEEecCHHHHHHHHHH--HhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 37899998 789999999999999888643 1123455666666666666643111 123444556666666666653
No 277
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=91.26 E-value=6.2 Score=35.95 Aligned_cols=146 Identities=14% Similarity=0.055 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchh----hhhcCCC-
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWA----FQLQGDD- 141 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~----~~~~g~~- 141 (224)
+++|++.|.. .+..+++.+.+|=.....|-.+.+...+++++++ +.=|---.|..+|- ..+.+..
T Consensus 163 ~d~Le~~I~~--~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i 240 (460)
T PRK13237 163 LDKLQALIDE--VGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSI 240 (460)
T ss_pred HHHHHHHhcc--ccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcH
Confidence 5667777752 2345565555554334433356777788888888 10000000100000 0011100
Q ss_pred --------CCCchhccc--ccccCCccc-ccce-ecHHHHHhhhcCC--cccccCCCCcHH-HHHHHHHHHHHHhhhhHH
Q psy6205 142 --------IIPDIVTVG--KPMGNGHPV-AAVI-TTKEIAKSFQETG--VEYFNTYGGNPV-SCAVANAVMEVLETENLR 206 (224)
Q Consensus 142 --------v~pDi~~~~--K~l~~G~p~-~av~-~~~~i~~~~~~~~--~~~~~T~~~~p~-~~aaa~a~l~~~~~~~l~ 206 (224)
---|++||| |.++ .|. |+++ .++++++.+...- ..-+.||+|-.. -++|.--.|+...++++.
T Consensus 241 ~ei~~e~~s~aD~~t~S~~K~~~--~~~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~~y~ 318 (460)
T PRK13237 241 KEIVHEMFSYADGCTMSGKKDCL--VNIGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQYEYI 318 (460)
T ss_pred hHHhhhccCcCcEEEEeCCCCCC--CCCceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhchHHHH
Confidence 135888775 4443 233 2233 3667777665431 122358887544 222222245555555666
Q ss_pred HHHHHHHHHHHHhhhhcC
Q psy6205 207 EHALDVGNQLHTPKKENN 224 (224)
Q Consensus 207 ~~~~~~g~~l~~~l~~l~ 224 (224)
++.-+..++|.+.|++.|
T Consensus 319 ~~ri~~~~~l~~~L~~~G 336 (460)
T PRK13237 319 EHRVGQVRYLGEKLLAAG 336 (460)
T ss_pred HHHHHHHHHHHHHHHHCC
Confidence 666666788888887654
No 278
>PRK09148 aminotransferase; Validated
Probab=91.22 E-value=0.45 Score=42.26 Aligned_cols=75 Identities=12% Similarity=0.167 Sum_probs=49.1
Q ss_pred hccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 147 VTVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 147 ~~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
-+|||.++ -|+=+|.+++++++.+.+... ....+++.++++..++.+.|+--++ +.+.+.+++.-+++.+.|+++
T Consensus 234 ~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~--~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 311 (405)
T PRK09148 234 TSMSKTFSMAGWRMGFAVGNERLIAALTRV--KSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA 311 (405)
T ss_pred eccccccCCcchheeeeeCCHHHHHHHHHH--HHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 36899998 789999999999999888642 1223455566776766666642111 234455566666677766653
No 279
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=91.19 E-value=1.7 Score=39.20 Aligned_cols=43 Identities=19% Similarity=0.183 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHccCCCCceEEEEcc-ccCCCCcccCCHHHHHHHHHH
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAES-LQSCGGQIIPPANYLREVYKH 120 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Ep-v~~~~G~~~~~~~~l~~~~~~ 120 (224)
+++|++.+.. ...+++++|+++- .-..+| .+.+.+.+++++++
T Consensus 138 ~e~Le~~I~~--~~~~~~~~I~v~~p~N~~gG-~~~s~~~l~~i~ei 181 (431)
T cd00617 138 VAKLEKLIDE--VGAENIPYIVLTITNNTAGG-QPVSMANLREVREL 181 (431)
T ss_pred HHHHHHHhCc--ccCCCccEEEEECCcCCCCC-ccCCHHHHHHHHHH
Confidence 5666666642 1234678888872 222235 46678888888888
No 280
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=91.14 E-value=1.4 Score=39.04 Aligned_cols=119 Identities=13% Similarity=0.054 Sum_probs=68.3
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchh--cccccccC--Cccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN--GHPVAA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~--G~p~~a 161 (224)
++.+|++|....-.|.+.+.+...+.+++. |-.-+ .++. . +..+. .-.|++ +++|-++| ++-.|+
T Consensus 136 ~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD~a~-~~~~-~--~~pl~--~gaDivv~S~sK~l~G~~~~~~G~ 209 (382)
T TIGR02080 136 KPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVDNTF-LSPA-L--QNPLA--LGADLVLHSCTKYLNGHSDVIAGA 209 (382)
T ss_pred CceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCC-cccc-c--CCchh--hCCCEEEeecceeccCCCCceeEE
Confidence 467888886666677777766665555554 11111 1111 0 11111 235776 58998875 355676
Q ss_pred cee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHH
Q psy6205 162 VIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLH 217 (224)
Q Consensus 162 v~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~ 217 (224)
+++ ++++.+.+... ....+...+|+.+..++..|+.|.. +...+++..+.++|.
T Consensus 210 i~~~~~~~~~~l~~~--~~~~g~~~sp~~a~l~lr~l~tl~~R~~~~~~na~~~a~~L~ 266 (382)
T TIGR02080 210 VIAKDPQVAEELAWW--ANNLGVTGGAFDSYLTLRGLRTLVARMRLQQRNAQAIVEYLQ 266 (382)
T ss_pred EEeCCHHHHHHHHHH--HHccCCCCCHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH
Confidence 666 57776666432 2223556889999999888887743 233444445544443
No 281
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=91.01 E-value=2.6 Score=36.12 Aligned_cols=122 Identities=16% Similarity=0.023 Sum_probs=63.3
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCC-CCc
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDI-IPD 145 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v-~pD 145 (224)
+++|++.+......+.+..++++.-.....|.+.+.++..+.+++. .+.++.--.. .......+ + ..|
T Consensus 132 ~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~-~~~~~~~~--~~~~d 208 (345)
T cd06450 132 PEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFP-EPRHLDFG--IERVD 208 (345)
T ss_pred HHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhhCh-hhHHHhcC--ccccC
Confidence 4556665543211222444444443344467777777777777776 3222110000 00000011 1 246
Q ss_pred hh--cccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHhh
Q psy6205 146 IV--TVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQLHTPK 220 (224)
Q Consensus 146 i~--~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~~~l 220 (224)
.+ ++.|.++++..+|.++.+ ..+..++++.+.+ ++..++..++.++|.+.|
T Consensus 209 ~~~~s~~K~l~~p~g~g~~~~~------------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L 264 (345)
T cd06450 209 SISVDPHKYGLVPLGCSAVLVR------------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELI 264 (345)
T ss_pred EEEEchhHhhCCCcchHHHHHH------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 577977665656666544 3334445555543 456777888999999888
Q ss_pred hhc
Q psy6205 221 KEN 223 (224)
Q Consensus 221 ~~l 223 (224)
+++
T Consensus 265 ~~~ 267 (345)
T cd06450 265 RAD 267 (345)
T ss_pred hcC
Confidence 764
No 282
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=90.94 E-value=1.4 Score=40.08 Aligned_cols=104 Identities=13% Similarity=0.197 Sum_probs=57.0
Q ss_pred CceEEEEccc--cCCCC--cccCCHHHHHHHHHH-----HHhCCccccccc--hh-------hhhcCCCCCCchhccc--
Q psy6205 91 RPCAFFAESL--QSCGG--QIIPPANYLREVYKH-----VQVGFGRVGTHW--WA-------FQLQGDDIIPDIVTVG-- 150 (224)
Q Consensus 91 ~iaavi~Epv--~~~~G--~~~~~~~~l~~~~~~-----v~tG~GrtG~~~--~~-------~~~~g~~v~pDi~~~~-- 150 (224)
+.++|+++-. ....| .+.+-++..+.+++. |-.|+|-.+. . |+ ++-.. .-.|++++|
T Consensus 211 ~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~-~~~~gl~~~p~~~~~~~--~GaDiv~fSg~ 287 (454)
T TIGR00474 211 NTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVD-LSRYGLPDEPTVQEVIA--AGVDLVTFSGD 287 (454)
T ss_pred CCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCccccc-chhccCCCCcccccHhH--cCCCEEEecCc
Confidence 4666666654 33445 366777777777776 3334443321 1 10 11111 237999999
Q ss_pred ccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHH
Q psy6205 151 KPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVL 200 (224)
Q Consensus 151 K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~ 200 (224)
|.++|-. .|+++++++..+.+... .+.-.+.-+-+..|+-.++|..+
T Consensus 288 K~LgGp~-~G~i~g~~~~i~~l~~~--~l~r~lr~~k~~la~l~~~l~~~ 334 (454)
T TIGR00474 288 KLLGGPQ-AGIIVGKKELIERLKKN--PLTRALRVDKLTLAALEATLRLY 334 (454)
T ss_pred cccCCCe-EEEEEECHHHHHhhhhc--hhHHHHhhChHHHHHHHHHHHHH
Confidence 9997642 56688999888776543 11122222333444555555554
No 283
>PLN00144 acetylornithine transaminase
Probab=90.93 E-value=0.33 Score=42.94 Aligned_cols=20 Identities=45% Similarity=0.961 Sum_probs=18.3
Q ss_pred CCCCcceeeccCCceeEEEE
Q psy6205 2 ARYPLIGDVRGIGLFVGVEL 21 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~giel 21 (224)
++||.+++|||.|+|.++||
T Consensus 308 ~~~~~~~~vrg~G~~~~l~l 327 (382)
T PLN00144 308 GGNPHVKEVRGVGLLVGIQL 327 (382)
T ss_pred hhCCCceeeecCceEEEEEe
Confidence 45888999999999999999
No 284
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=90.83 E-value=1.4 Score=39.56 Aligned_cols=69 Identities=23% Similarity=0.305 Sum_probs=42.3
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchh--cccccccC-Ccccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN-GHPVAAV 162 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~-G~p~~av 162 (224)
++.+|++|......|.+.+.++..+.+++. |-.-++ ++. ...... .-+|++ .+.|.++| |-.+|++
T Consensus 143 ~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD~a~a-~~~---~~~p~~--~gaDivv~S~tK~l~G~g~~~gG~ 216 (425)
T PRK06084 143 RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVDNTVA-TPV---LCRPFE--HGADIVVHSLTKYIGGHGTSIGGI 216 (425)
T ss_pred CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEECCCc-ccc---cCChhh--cCCCEEEECchhcccccccceeEE
Confidence 567899998888888888866666666665 100011 221 111122 347877 68999987 5566666
Q ss_pred eec
Q psy6205 163 ITT 165 (224)
Q Consensus 163 ~~~ 165 (224)
++.
T Consensus 217 v~~ 219 (425)
T PRK06084 217 VVD 219 (425)
T ss_pred EEe
Confidence 653
No 285
>PRK06207 aspartate aminotransferase; Provisional
Probab=90.77 E-value=3.8 Score=36.37 Aligned_cols=73 Identities=10% Similarity=0.067 Sum_probs=43.4
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHhhhh
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~~l~~ 222 (224)
++||.++ .|+-+|.+++++++.+.+... ....+.+.+.++.+++.+.|+.-. -++..++.++.-+++.+.|++
T Consensus 248 SfSK~~~lpGlRiG~ii~~~~l~~~~~~~--~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~ 323 (405)
T PRK06207 248 GPSKTESLSGYRLGVAFGSPAIIDRMEKL--QAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRG 323 (405)
T ss_pred cchhhccCcccceEEEEcCHHHHHHHHHH--HhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5799998 799999999999999888643 112233445556666655553200 012233444444555555544
No 286
>PLN02509 cystathionine beta-lyase
Probab=90.70 E-value=2 Score=39.19 Aligned_cols=121 Identities=12% Similarity=0.041 Sum_probs=66.4
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchh--cccccccC-C-ccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN-G-HPVAA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~-G-~p~~a 161 (224)
+..+|++|......|.+.+-+.+.+.+++. |-.-++ ++. . ....+ .-.|++ .+.|.|+| | .-.|+
T Consensus 217 ~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~a-~~~-~--~~pl~--~gaDivv~S~tK~l~G~gdv~gG~ 290 (464)
T PLN02509 217 QTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSIM-SPV-L--SRPLE--LGADIVMHSATKFIAGHSDVMAGV 290 (464)
T ss_pred CCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCcc-ccc-c--CChhh--cCCcEEEecCcccccCCCccceeE
Confidence 567899998888788776666666666665 111110 111 0 11122 346876 47899986 4 33444
Q ss_pred ceec-HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 162 VITT-KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 162 v~~~-~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
+.++ +++.+.+... ........+|..|+.++..|+.+.. .+++..+..+++.+.|+
T Consensus 291 v~~~~~~l~~~~~~~--~~~~g~~l~p~~A~l~lr~L~tL~~--R~~r~~~nA~~la~~L~ 347 (464)
T PLN02509 291 LAVKGEKLAKEVYFL--QNSEGSGLAPFDCWLCLRGIKTMAL--RIEKQQENARKIAMYLS 347 (464)
T ss_pred EEeccHHHHHHHHHH--HHhcCCCcCHHHHHHHHhhhhhHHH--HHHHHHHHHHHHHHHHh
Confidence 5544 4343332211 0111223588999999999998843 34444445555555444
No 287
>PRK06290 aspartate aminotransferase; Provisional
Probab=90.57 E-value=0.56 Score=41.86 Aligned_cols=75 Identities=21% Similarity=0.162 Sum_probs=46.8
Q ss_pred hccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 147 VTVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 147 ~~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
-++||.+| .|+=+|.+++++++++.+... ....+.+.+.++..++.+.|+.-+ -+++.+++++.-+++.+.|+++
T Consensus 247 ~SfSK~~g~~GlRiG~ii~~~~l~~~l~~~--~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 323 (410)
T PRK06290 247 HSLSKAYNMTGWRLAFVVGNELIVKAFATV--KDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV 323 (410)
T ss_pred eechhhcCCchhheEeEEeCHHHHHHHHHH--HhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 36999997 688899999999999887642 111222223455556655554311 1235555666667777777654
No 288
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=90.53 E-value=0.33 Score=43.62 Aligned_cols=20 Identities=35% Similarity=0.559 Sum_probs=17.8
Q ss_pred CCCcceeeccCCceeEEEEe
Q psy6205 3 RYPLIGDVRGIGLFVGVELV 22 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv 22 (224)
.||.++++||.|+|+++++.
T Consensus 355 ~~~~i~~vrg~G~~~~i~~~ 374 (427)
T TIGR00508 355 KNPVVKDVRVLGAIGVVEMY 374 (427)
T ss_pred cCCCEEeEeccccEEEEEEC
Confidence 46778899999999999995
No 289
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=90.29 E-value=0.21 Score=45.49 Aligned_cols=19 Identities=37% Similarity=0.889 Sum_probs=17.5
Q ss_pred CCC-cceeec--cCCceeEEEE
Q psy6205 3 RYP-LIGDVR--GIGLFVGVEL 21 (224)
Q Consensus 3 ~~p-~v~~vR--g~Gl~~giel 21 (224)
+|| .|++|| |.|||+|+|+
T Consensus 391 ~~~~~i~~vRg~G~Glm~gie~ 412 (464)
T TIGR00699 391 KYPEFIQNLRGKGRGTFIAWDT 412 (464)
T ss_pred hCCCceeeecccCeEEEEEEec
Confidence 488 799999 9999999998
No 290
>PRK08068 transaminase; Reviewed
Probab=90.10 E-value=0.66 Score=40.85 Aligned_cols=75 Identities=12% Similarity=0.010 Sum_probs=45.9
Q ss_pred hccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 147 VTVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 147 ~~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~~l~~l 223 (224)
-++||.+| .|+=+|.+++++++.+.+.... .+ ...+..+....++.+.|..-. -+.+.+++++.-+++.+.|+++
T Consensus 236 ~S~SK~~g~~GlRiG~~~~~~~l~~~l~~~~-~~-~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~ 313 (389)
T PRK08068 236 YTLSKTFNMAGWRVAFAVGNESVIEAINLLQ-DH-LFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREI 313 (389)
T ss_pred ecchhccCCccceeEeEecCHHHHHHHHHHH-hh-ccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 37999997 6899999999999998886431 11 122223333444444442111 1245666677777777777654
No 291
>PRK07683 aminotransferase A; Validated
Probab=90.06 E-value=0.84 Score=40.23 Aligned_cols=73 Identities=11% Similarity=0.108 Sum_probs=45.9
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHhhhh
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~~l~~ 222 (224)
++||.+| -|+=+|.+++++++++.+... ......+.++++..++.+.|+.-+ -+.+.++.++.-+++.+.|++
T Consensus 230 s~SK~~~~pGlRiG~i~~~~~l~~~~~~~--~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 305 (387)
T PRK07683 230 GLSKSHSMTGWRIGFLFAPSYLAKHILKV--HQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLIS 305 (387)
T ss_pred eccccccCccceeEEEEcCHHHHHHHHHH--HHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999 789999999999999887643 111223345566566655554211 123445556666666666654
No 292
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=89.90 E-value=2.6 Score=37.69 Aligned_cols=130 Identities=14% Similarity=0.081 Sum_probs=80.2
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH----HHhCCccccccchhhhhcCCCCCCchhccc--ccccCCcccccce
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH----VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG--KPMGNGHPVAAVI 163 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~--K~l~~G~p~~av~ 163 (224)
++.-.|.+.-+...-|.+.|-++..+.+++. +.=|.--.|..-.-.+. +..|.+++| |.|.|=..+|.+.
T Consensus 161 ~~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~----l~~Df~afsgHKwl~gP~GiGvLy 236 (405)
T COG0520 161 PKTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQE----LGCDFLAFSGHKWLLGPTGIGVLY 236 (405)
T ss_pred CCceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchh----cCCCEEEEcccccccCCCceEEEE
Confidence 4667788888888899999999999999888 11111001110011122 238888775 7676545578899
Q ss_pred ecHHHHHhhhcC---C-c----c--cccCCC----------CcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHhh
Q psy6205 164 TTKEIAKSFQET---G-V----E--YFNTYG----------GNPVSCAVANAVMEVLET---ENLREHALDVGNQLHTPK 220 (224)
Q Consensus 164 ~~~~i~~~~~~~---~-~----~--~~~T~~----------~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~~~l 220 (224)
+++++.+.+.+. + . . ...|+. -|..+.....++++++++ +.+.++.+++.+++.++|
T Consensus 237 ~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L 316 (405)
T COG0520 237 VRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGL 316 (405)
T ss_pred EchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999999987432 0 0 0 001221 122333334456666654 568888899999999998
Q ss_pred hhc
Q psy6205 221 KEN 223 (224)
Q Consensus 221 ~~l 223 (224)
+++
T Consensus 317 ~~~ 319 (405)
T COG0520 317 SEL 319 (405)
T ss_pred hcC
Confidence 865
No 293
>PRK08297 L-lysine aminotransferase; Provisional
Probab=89.69 E-value=0.4 Score=43.35 Aligned_cols=20 Identities=35% Similarity=0.732 Sum_probs=17.6
Q ss_pred CCCcce-eeccCCceeEEEEe
Q psy6205 3 RYPLIG-DVRGIGLFVGVELV 22 (224)
Q Consensus 3 ~~p~v~-~vRg~Gl~~gielv 22 (224)
+||.+. +|||.|+|.++|+.
T Consensus 368 ~~~~~~~~vrg~G~~~~i~~~ 388 (443)
T PRK08297 368 EFPAVVSNVRGRGLMCAFDLP 388 (443)
T ss_pred HCCCcceeeeccceEEEEEec
Confidence 478776 99999999999995
No 294
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=89.54 E-value=0.81 Score=40.23 Aligned_cols=74 Identities=8% Similarity=0.060 Sum_probs=42.9
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|||.+| .|+=+|.+++++++.+.+... ....+++..+....++.+.|..-++ +.+.+.+++.-+++.+.|+++
T Consensus 236 SfSK~~g~~GlRiG~~v~~~~li~~l~~~--~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~ 312 (388)
T PRK07366 236 TLSKSYNMGGFRIGFAIGNAQLIQALRQV--KAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI 312 (388)
T ss_pred ecccccCCcchhheehcCCHHHHHHHHHH--HhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 7999997 789999999999999887642 1112222223333444454421111 134445556666666666543
No 295
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=89.48 E-value=1.6 Score=39.21 Aligned_cols=65 Identities=23% Similarity=0.302 Sum_probs=42.5
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhc--ccccccC-Cccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN-GHPV 159 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~-G~p~ 159 (224)
++.+|++|......|.+.+-++..+.+++. ++. ++ +.+..+. .-+|+++ +.|.++| |-++
T Consensus 148 ~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~a~a----~~---~~~~pl~--~gaDivv~S~tK~lgg~~~~~ 218 (427)
T PRK05994 148 RTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVDNTLA----SP---YLIRPIE--HGADIVVHSLTKFLGGHGNSM 218 (427)
T ss_pred CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCcc----cc---ccCCccc--cCCcEEEEcCccccCCCCCcE
Confidence 678999998888888888766666666665 221 12 1122232 5589876 7899986 4566
Q ss_pred cccee
Q psy6205 160 AAVIT 164 (224)
Q Consensus 160 ~av~~ 164 (224)
|+++.
T Consensus 219 gG~v~ 223 (427)
T PRK05994 219 GGIIV 223 (427)
T ss_pred EEEEE
Confidence 76555
No 296
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=89.35 E-value=0.94 Score=39.14 Aligned_cols=71 Identities=14% Similarity=0.205 Sum_probs=45.3
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhhhh
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~~l~~ 222 (224)
++||.++ .|+-+|.+++++++.+.+... ..+++.+.++.+++.+.|+-.+. .+...+..+.-+.+.+.|++
T Consensus 201 S~SK~~~l~GlRiG~iv~~~~~i~~~~~~----~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 273 (337)
T PRK03967 201 TFSKAFGLAGIRAGYAIANEEIIDALYRI----KPPFSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGE 273 (337)
T ss_pred cchHhhcchhhhheeeecCHHHHHHHHhh----cCCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 6899999 889999999999999888643 13445677777777777753221 11222333333445555543
No 297
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=89.33 E-value=4 Score=35.99 Aligned_cols=119 Identities=17% Similarity=0.166 Sum_probs=67.5
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhccc----ccccCCcc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG----KPMGNGHP 158 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~----K~l~~G~p 158 (224)
++.+|+ |+. ..|...+-+++.+.+++. .+ ++|.+ +.-...| ..-|+.+|| |.++.|..
T Consensus 119 ~tk~Ii--p~~-~~G~~~d~~~I~~la~~~~i~vIeDaa~-~~g~~----~~~~~~g--~~~~~~~fSf~~~K~l~~g~~ 188 (376)
T TIGR02379 119 RTKAIV--PVH-YAGVACDMDTIMALANKHQLFVIEDAAQ-GVMST----YKGRALG--SIGHLGTFSFHETKNYTSGGE 188 (376)
T ss_pred CceEEE--EeC-CCCCccCHHHHHHHHHHCCCEEEEECcc-ccCCc----cCCcccC--CCCCEEEEeCCCCCcCcccCC
Confidence 455565 432 246556656666666665 22 23221 1111222 334888898 99987766
Q ss_pred cccceec-HHHHHhhhcC---Cc----------------ccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q psy6205 159 VAAVITT-KEIAKSFQET---GV----------------EYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHT 218 (224)
Q Consensus 159 ~~av~~~-~~i~~~~~~~---~~----------------~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~ 218 (224)
.|+++++ +++++.+... +. ..++.|-.+.+.+|.+++.|+.+++ +.++-+++.++..+
T Consensus 189 gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~--~~~~r~~~~~~y~~ 266 (376)
T TIGR02379 189 GGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADR--INQDRLATWQLYQD 266 (376)
T ss_pred ceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhHH--HHHHHHHHHHHHHH
Confidence 7777775 7777766521 10 0223455567888888888888865 44444555555555
Q ss_pred hhh
Q psy6205 219 PKK 221 (224)
Q Consensus 219 ~l~ 221 (224)
.|+
T Consensus 267 ~L~ 269 (376)
T TIGR02379 267 ALK 269 (376)
T ss_pred Hhc
Confidence 543
No 298
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=89.32 E-value=2.8 Score=37.43 Aligned_cols=121 Identities=12% Similarity=0.028 Sum_probs=65.0
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchhc--ccccccC-C-ccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN-G-HPVAA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~-G-~p~~a 161 (224)
+..+|++|-...-.|.+..-++..+.+++. |-.-+ -++. . +.-.. .-.|+++ ..|.++| | .-.|+
T Consensus 145 ~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD~a~-a~~~-~--~~pl~--~gaDivv~S~tK~l~g~~~~~~G~ 218 (405)
T PRK08776 145 SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTF-LSPA-L--QKPLE--FGADLVLHSTTKYINGHSDVVGGA 218 (405)
T ss_pred CCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEECCC-cccc-c--CCccc--ccCCEEEecCceeecCCCCceEEE
Confidence 466788886555567666555555555554 00001 0111 0 01111 2257764 5798875 3 55676
Q ss_pred cee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 162 VIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 162 v~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
+++ ++++.+.+... .....+..+|+.+.+.+..++.++. ..++..++...+.+.|+
T Consensus 219 vv~~~~~l~~~l~~~--~~~~g~~~s~~~a~l~~~gl~tl~~--r~~~~~~na~~la~~L~ 275 (405)
T PRK08776 219 VVARDAELHQQLVWW--ANALGLTGSPFDAFLTLRGLRTLDA--RLRVHQENADAIAALLD 275 (405)
T ss_pred EEeCCHHHHHHHHHH--HHhcCCCCCHHHHHHHHhhhCcHHH--HHHHHHHHHHHHHHHHH
Confidence 766 56776666432 1122345789999999888887743 33344444444444443
No 299
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=89.31 E-value=0.88 Score=39.81 Aligned_cols=71 Identities=21% Similarity=0.162 Sum_probs=43.6
Q ss_pred ccccccc-CCccccccee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhh
Q psy6205 148 TVGKPMG-NGHPVAAVIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~ 222 (224)
+|||.++ .|+.+|.+++ ++++.+.+... ...++-|.++.+++.+.|+.-+ -++..+..++.-+++.+.|++
T Consensus 228 SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~----~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~ 301 (371)
T PRK05166 228 TFSKAYGLAGLRVGYGLVSDPELVGLLDRV----RTPFNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAE 301 (371)
T ss_pred echHhhhcchhheeeeecCCHHHHHHHHHh----ccCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5999999 8999999765 78888877532 1244557777666666664210 012233344444556666654
No 300
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=88.80 E-value=2.3 Score=37.72 Aligned_cols=121 Identities=14% Similarity=0.051 Sum_probs=64.4
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH----H-HhCCccccccchhhhhcCCCCCCchh--cccccccC-C-ccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH----V-QVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN-G-HPVAA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----v-~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~-G-~p~~a 161 (224)
+..+|++|......|.+.+-+.+.+.+++. | =.-+ .++. . ..... .-.|++ .+.|.++| | .-.|+
T Consensus 146 ~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD~a~-a~~~-~--~~p~~--~gaDivv~S~sK~l~g~~~~~gG~ 219 (388)
T PRK07811 146 RTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVDNTF-ASPY-L--QQPLA--LGADVVVHSTTKYIGGHSDVVGGA 219 (388)
T ss_pred CCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEECCC-Cccc-c--CCchh--hCCcEEEecCceeecCCCCcEEEE
Confidence 567899986665567666666666666655 1 0001 1111 0 11111 336766 46899986 3 34566
Q ss_pred ceec-HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 162 VITT-KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 162 v~~~-~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
++++ +++.+.+... ........+|..+..++..|+.+.. ..++..++.+.+.+.|+
T Consensus 220 vv~~~~~l~~~~~~~--~~~~g~~~s~~~a~l~~~~L~tl~~--R~~~~~~na~~la~~L~ 276 (388)
T PRK07811 220 LVTNDEELDEAFAFL--QNGAGAVPGPFDAYLTLRGLKTLAV--RMDRHSENAEAVAEFLA 276 (388)
T ss_pred EEECCHHHHHHHHHH--HHhcCCCCCHHHHHHHHhccCcHHH--HHHHHHHHHHHHHHHHH
Confidence 6764 6666654321 1112233467777777776666532 34444455555555554
No 301
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=88.69 E-value=9.8 Score=35.28 Aligned_cols=143 Identities=13% Similarity=0.141 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhh---cCCCC-
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQL---QGDDI- 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~---~g~~v- 142 (224)
.++|++.++...+.+..+.+|+.-..-.+-|.+-|-++.-+.+++. .+.|. .+..-++ +. ++
T Consensus 249 ~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~-----~~~~~~~r~~l~-gle 322 (522)
T TIGR03799 249 VDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGA-----TLLSNTYRHLLK-GIE 322 (522)
T ss_pred HHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhH-----HHhCHHHHHHhc-Cch
Confidence 5667766654333344556666544344678899988888888886 33322 1111111 11 25
Q ss_pred CCchhccc--ccccCCcccccceecH-HHHHhhhcCC-c-------cc-ccCCCCcHHHHH-HHHHHHHHHhh---hhHH
Q psy6205 143 IPDIVTVG--KPMGNGHPVAAVITTK-EIAKSFQETG-V-------EY-FNTYGGNPVSCA-VANAVMEVLET---ENLR 206 (224)
Q Consensus 143 ~pDi~~~~--K~l~~G~p~~av~~~~-~i~~~~~~~~-~-------~~-~~T~~~~p~~~a-aa~a~l~~~~~---~~l~ 206 (224)
..|.++++ |-+.+-+..|+++.++ +..+.+.... . .+ ..|+.+..-..+ ..-++|+.+.+ +.++
T Consensus 323 ~aDSit~d~HK~l~~P~g~G~llvr~~~~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii 402 (522)
T TIGR03799 323 RADSVTIDAHKQLYVPMGAGMVLFKDPALMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLI 402 (522)
T ss_pred hCCEEEEChhhcCCcCcccEEEEEeCHHHHHHhccCcchhcCCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHHHH
Confidence 57888764 6665557888888864 5555443310 0 00 023333322222 35577777754 4677
Q ss_pred HHHHHHHHHHHHhhhhc
Q psy6205 207 EHALDVGNQLHTPKKEN 223 (224)
Q Consensus 207 ~~~~~~g~~l~~~l~~l 223 (224)
++..++.++|.+.|++.
T Consensus 403 ~~~~~la~~l~~~L~~~ 419 (522)
T TIGR03799 403 DQSIEKAKYFADLIQQQ 419 (522)
T ss_pred HHHHHHHHHHHHHHhhC
Confidence 77888999999988753
No 302
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=88.66 E-value=0.91 Score=40.36 Aligned_cols=20 Identities=25% Similarity=0.280 Sum_probs=16.8
Q ss_pred CCCcceeeccCCceeEEEEee
Q psy6205 3 RYPLIGDVRGIGLFVGVELVT 23 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~ 23 (224)
+++ +.+|||.|+|++||+..
T Consensus 320 ~~~-i~~vrG~Glm~~i~l~~ 339 (395)
T PRK03715 320 ERG-LEGERGEGLLRALLLGK 339 (395)
T ss_pred cCC-cCeEEcceeEEEEEecC
Confidence 355 78999999999999964
No 303
>PRK07908 hypothetical protein; Provisional
Probab=88.29 E-value=1.8 Score=37.42 Aligned_cols=71 Identities=6% Similarity=0.048 Sum_probs=44.1
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHH--HHh-hhhHHHHHHHHHHHHHHhhhh
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVME--VLE-TENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~--~~~-~~~l~~~~~~~g~~l~~~l~~ 222 (224)
+++|.++ .|+-+|.+++++++.+.+.... ..+..+++..+++.+.++ ..+ -+++.++.++.-+++.+.|++
T Consensus 201 S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~----~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~ 275 (349)
T PRK07908 201 SLTKTWSLAGLRVGYALGAPDVLARLTRGR----AHWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRA 275 (349)
T ss_pred ecccccCCccceeeeeecCHHHHHHHHhcC----CCCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5799998 7899999999999998876431 123444555554444433 111 123455566666666676655
No 304
>PRK07582 cystathionine gamma-lyase; Validated
Probab=87.62 E-value=2.7 Score=36.89 Aligned_cols=121 Identities=11% Similarity=-0.028 Sum_probs=67.4
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchh--cccccccC--Cccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN--GHPVAA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~--G~p~~a 161 (224)
++..|++|......|.+.+-+.+.+.+++. |-.-+. +. ..+.... +..|++ ++.|.++| |+.+|+
T Consensus 132 ~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD~t~~-~~---~~~~p~~--~g~Divv~S~sK~l~G~~g~~~G~ 205 (366)
T PRK07582 132 GADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVDNTTA-TP---LGQRPLE--LGADLVVASDTKALTGHSDLLLGY 205 (366)
T ss_pred CceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEECCCC-Cc---cccCchh--cCCcEEEecccccccCCCCeeEEE
Confidence 566788886555567666666666666665 100010 00 0111111 335876 47899976 466787
Q ss_pred cee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 162 VIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 162 v~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
+++ ++++.+.+... +. ..+-..+|..+..++..|+.+. -..++..++...+.+.|+
T Consensus 206 v~~~~~~l~~~l~~~-~~-~~g~~~~~~~a~l~~r~l~tl~--~R~~~~~~na~~la~~L~ 262 (366)
T PRK07582 206 VAGRDPELMAAVERW-RL-LAGAIPGPFEAWLAHRSLGTLG--LRFARQCANALAVAELLA 262 (366)
T ss_pred EEcCcHHHHHHHHHH-HH-HhCCCCCHHHHHHHHhccccHH--HHHHHHHHHHHHHHHHHH
Confidence 787 47777766532 11 1233456888887777777653 123444455555555554
No 305
>PRK07050 cystathionine beta-lyase; Provisional
Probab=87.44 E-value=2.1 Score=38.01 Aligned_cols=55 Identities=20% Similarity=0.207 Sum_probs=32.0
Q ss_pred Cchh--cccccccCC--ccccccee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHH
Q psy6205 144 PDIV--TVGKPMGNG--HPVAAVIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVL 200 (224)
Q Consensus 144 pDi~--~~~K~l~~G--~p~~av~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~ 200 (224)
.|++ .+.|.++|+ .+.|++++ ++++++.+... .....-..+|..+-.++..|+-+
T Consensus 202 aDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~--~~~~G~~~~~~~a~l~lr~l~tl 261 (394)
T PRK07050 202 VDISVQALTKYQSGGSDVLMGATITADAELHAKLKLA--RMRLGIGVSADDCSLVLRGLPSL 261 (394)
T ss_pred CeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHH--HHhcCCCCCHHHHHHHHcCCCcH
Confidence 5876 489999864 67887777 57777766432 11123345566655554434333
No 306
>PRK05968 hypothetical protein; Provisional
Probab=87.36 E-value=1.8 Score=38.41 Aligned_cols=123 Identities=14% Similarity=0.077 Sum_probs=65.1
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchh--cccccccC-C-ccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN-G-HPVAA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~-G-~p~~a 161 (224)
+..+|++|-..+..+.+.+-+.+.+.+++. |-.-+ -++. ...--.+| .|++ ++.|.++| | .-.|+
T Consensus 147 ~tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~-a~~~-~~~p~~~g----~Divv~S~tK~l~g~~~~~gG~ 220 (389)
T PRK05968 147 GAKLLYLESPTSWVFELQDVAALAALAKRHGVVTMIDNSW-ASPV-FQRPITLG----VDLVIHSASKYLGGHSDTVAGV 220 (389)
T ss_pred cCCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCC-cchh-ccCchhcC----CcEEEeeccccccCCCCeEEEE
Confidence 345788886555544444444444444443 11101 0110 00000123 4766 47899986 3 33566
Q ss_pred ceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh
Q psy6205 162 VITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 162 v~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~ 222 (224)
+++++++++.+......... ...+|..++.++..|+.+. ...++-.++.+++.+.|++
T Consensus 221 i~~~~~~~~~l~~~~~~~~g-~~~~~~~A~~~l~~L~tl~--~r~~~~~~~a~~la~~L~~ 278 (389)
T PRK05968 221 VAGSKEHIARINAEAYPYLG-AKLSPFEAWLLLRGLRTLP--LRMKAHEASALEIARRLKA 278 (389)
T ss_pred EEECHHHHHHHHHHHHHhCC-CCCChHHHHHHHcccCcHH--HHHHHHHHHHHHHHHHHHh
Confidence 77888888776532111111 3457888888888887772 2344444456666666654
No 307
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=87.33 E-value=3.5 Score=36.53 Aligned_cols=120 Identities=14% Similarity=0.057 Sum_probs=70.7
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchhc--ccccccC--Cccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN--GHPVAA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~--G~p~~a 161 (224)
+..+|++|....-.|.+.+.++..+.+++. |-.-+ .++. . ..... .-.|+++ +.|-++| +...|+
T Consensus 137 ~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivDeay-~~~~-~--~~pl~--~gaDivv~S~tK~l~G~~d~~~G~ 210 (386)
T PRK08045 137 KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTF-LSPA-L--QNPLA--LGADLVLHSCTKYLNGHSDVVAGV 210 (386)
T ss_pred CCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEECCC-Cccc-c--CCchh--hCCCEEEeecceeccCCCCceeEE
Confidence 567888887666677777766666665554 10001 1111 1 11121 2358764 7999975 355677
Q ss_pred cee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHH
Q psy6205 162 VIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHT 218 (224)
Q Consensus 162 v~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~ 218 (224)
+++ ++++.+.+... ....+...+|..+-.++..|+-+. -+...+++..+.++|.+
T Consensus 211 vi~~~~~~~~~l~~~--~~~~g~~~~p~~~~l~~rgl~tl~~R~~~~~~na~~la~~L~~ 268 (386)
T PRK08045 211 VIAKDPDVVTELAWW--ANNIGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQT 268 (386)
T ss_pred EEeCcHHHHHHHHHH--HHhcCCCCCHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHc
Confidence 766 46676655422 122345578999888888888774 24566666666666654
No 308
>PRK06107 aspartate aminotransferase; Provisional
Probab=87.27 E-value=6.3 Score=34.86 Aligned_cols=73 Identities=10% Similarity=0.022 Sum_probs=47.3
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHhhhh
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~~l~~ 222 (224)
.|+|.++ .|+=+|.+++++++.+.+... ....+...++++.+++.+.|+.-+ -+...++.++.-+.+.+.|++
T Consensus 238 S~SK~~~~pGlRiG~~~~~~~~~~~~~~~--~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~ 313 (402)
T PRK06107 238 GVSKTYAMTGWRIGYAAGPADLIAAINKL--QSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNA 313 (402)
T ss_pred ccchhhcCcccceeeeecCHHHHHHHHHH--HHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4699998 789999999999999887643 222455667777777777774100 012334455555556666654
No 309
>KOG1402|consensus
Probab=87.00 E-value=1.3 Score=38.43 Aligned_cols=24 Identities=25% Similarity=0.607 Sum_probs=18.6
Q ss_pred CCc-ceeeccCCceeEEEEeecCCC
Q psy6205 4 YPL-IGDVRGIGLFVGVELVTCRKQ 27 (224)
Q Consensus 4 ~p~-v~~vRg~Gl~~gielv~~~~t 27 (224)
.|. |.+|||+||+.+|++...+.+
T Consensus 351 ~p~~v~~VRGrGl~~ai~i~~~~~~ 375 (427)
T KOG1402|consen 351 FPHVVKEVRGRGLLNAIVINPSKTS 375 (427)
T ss_pred ccchhheeeccceEEEEEecccccc
Confidence 353 689999999999999754443
No 310
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=86.91 E-value=1.5 Score=38.20 Aligned_cols=130 Identities=11% Similarity=0.033 Sum_probs=69.3
Q ss_pred CCceEEEEccccCCCCcccCCHH---HHHHHHHH--------HHhCCccccccchhh-hh--cCCCCCCchh--cccccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPAN---YLREVYKH--------VQVGFGRVGTHWWAF-QL--QGDDIIPDIV--TVGKPM 153 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~---~l~~~~~~--------v~tG~GrtG~~~~~~-~~--~g~~v~pDi~--~~~K~l 153 (224)
++..++++...+.-.|...+..+ +++.+++. +...|...+. .... .. .+.....-|+ +|+|.+
T Consensus 141 ~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~~~vi~~~S~SK~~ 219 (357)
T TIGR03539 141 VGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGR-PVSILDPRVCGGDHTGLLAVHSLSKRS 219 (357)
T ss_pred cCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCC-CccceecccCCCccccEEEEecccccc
Confidence 46678888766666776665543 33333332 3333322222 1110 00 0100111233 799998
Q ss_pred c-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhh
Q psy6205 154 G-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 154 ~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~ 222 (224)
+ .|+=+|.+++++++.+.+... ....+++.++++..++.+.|+.-. .++..++.++.-+++.+.|++
T Consensus 220 ~~~G~R~G~~i~~~~~~~~~~~~--~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~ 288 (357)
T TIGR03539 220 NLAGYRAGFVAGDPALVAELLTV--RKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEK 288 (357)
T ss_pred CCCceeEEEEecCHHHHHHHHHH--HhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 578889999999998887542 122345566777676666664211 123344455566666666655
No 311
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=86.56 E-value=1.1 Score=40.32 Aligned_cols=22 Identities=14% Similarity=0.157 Sum_probs=19.3
Q ss_pred CCCcceeeccCCceeEEEEeec
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTC 24 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~ 24 (224)
+||.+.++||.|+|.++|+..+
T Consensus 341 ~~~~~~~vrg~G~~~~i~l~~~ 362 (426)
T PRK00062 341 KAGIPLTVNRVGSMFGLFFTDE 362 (426)
T ss_pred HcCCceEEEEecceEEEEEecC
Confidence 4788899999999999999754
No 312
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=86.38 E-value=1.2 Score=39.67 Aligned_cols=75 Identities=20% Similarity=0.237 Sum_probs=40.2
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCC-CccccCCCCCCCCCChhHHHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPC-PDVYRGKYPADKYPDEDLGVKYAQDVQDL 81 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~-P~~yr~~~~~~~~~~~~~~~~~~~~l~~~ 81 (224)
+++.+.++||.|+|.++|+...... .+..+.......++...+. ++..|-.++... +++..++.++.|++.
T Consensus 325 ~~~~~~~vrg~Gl~~~~~l~~~~~~------~~~~~~~~l~~~Gv~v~~~g~~~lRl~p~~~~--t~~~i~~~~~~l~~~ 396 (406)
T PRK12381 325 RYGLFSEIRGLGLLIGCVLNAEYAG------KAKQISQEAAKAGVMVLIAGPNVVRFAPALNI--SEEEITTGLDRFARA 396 (406)
T ss_pred hCCCEEEEecCeEEEEEEecCchhh------HHHHHHHHHHHCCcEEeeCCCCEEEEeCCccC--CHHHHHHHHHHHHHH
Confidence 3677899999999999999652110 1111222222223333222 233343222211 256677777888877
Q ss_pred HHHH
Q psy6205 82 IEAM 85 (224)
Q Consensus 82 ~~~~ 85 (224)
++.+
T Consensus 397 l~~~ 400 (406)
T PRK12381 397 CERF 400 (406)
T ss_pred HHHH
Confidence 7665
No 313
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=86.08 E-value=1.6 Score=37.98 Aligned_cols=74 Identities=12% Similarity=0.002 Sum_probs=46.3
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|+|.++ .|+=+|.+++++++.+.+... ....++..+++..+++.+.|+.-+ .+...+..++.-+.+.+.|++.
T Consensus 220 S~SK~~~~~GlRiG~i~~~~~~~~~~~~~--~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 295 (364)
T PRK07865 220 SLSKQSNLAGYRAGFVAGDPALVAELLEV--RKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA 295 (364)
T ss_pred echhccCCCceeeEEEecCHHHHHHHHHH--HHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 6999996 578888899999998887642 112334456676666666664311 1233445556666666666543
No 314
>PRK12566 glycine dehydrogenase; Provisional
Probab=85.53 E-value=8.5 Score=38.19 Aligned_cols=140 Identities=14% Similarity=0.058 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH----HHhCCccccccchh-hhhcCCCCCCchhcc
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH----VQVGFGRVGTHWWA-FQLQGDDIIPDIVTV 149 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----v~tG~GrtG~~~~~-~~~~g~~v~pDi~~~ 149 (224)
+++|++.++ ++.++++||++.-....|+...+-++..+.+++. +.-|---.+...+. -.. +-.|++++
T Consensus 628 le~L~a~I~---~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~----~GADi~~~ 700 (954)
T PRK12566 628 LDDLKAKAA---AAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPAD----IGADVSHM 700 (954)
T ss_pred HHHHHHHhh---ccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhh----cCCCEEEe
Confidence 566776665 2457888888764333333333334444555444 00110000000000 112 23699877
Q ss_pred c--cccc----CCcc-cccceecHHHHHhhhcCC-----------cccccCCCCcHHHHHHHHHHHHHHhhhhHHHH---
Q psy6205 150 G--KPMG----NGHP-VAAVITTKEIAKSFQETG-----------VEYFNTYGGNPVSCAVANAVMEVLETENLREH--- 208 (224)
Q Consensus 150 ~--K~l~----~G~p-~~av~~~~~i~~~~~~~~-----------~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~--- 208 (224)
. |.++ +|.| +|.+.+++++...+.+.. .....+++++.+-.-++..-|..+=.+ +.+.
T Consensus 701 s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ 779 (954)
T PRK12566 701 NLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQ-LADASEV 779 (954)
T ss_pred cCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHH-HHHHHHH
Confidence 5 8775 4444 666677776665554211 112245566666666666666666434 3332
Q ss_pred HHHHHHHHHHhhhh
Q psy6205 209 ALDVGNQLHTPKKE 222 (224)
Q Consensus 209 ~~~~g~~l~~~l~~ 222 (224)
+..+..|+.++|++
T Consensus 780 ailnAnYla~rL~~ 793 (954)
T PRK12566 780 AILSANYLANQLGG 793 (954)
T ss_pred HHHHHHHHHHHhHh
Confidence 24578888888864
No 315
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=85.46 E-value=8.6 Score=33.84 Aligned_cols=76 Identities=17% Similarity=0.212 Sum_probs=46.3
Q ss_pred chhccc--ccccCCccccccee-cHHHHHhhhc---CCc-------------------ccccCCCCcHHHHHHHHHHHHH
Q psy6205 145 DIVTVG--KPMGNGHPVAAVIT-TKEIAKSFQE---TGV-------------------EYFNTYGGNPVSCAVANAVMEV 199 (224)
Q Consensus 145 Di~~~~--K~l~~G~p~~av~~-~~~i~~~~~~---~~~-------------------~~~~T~~~~p~~~aaa~a~l~~ 199 (224)
|+..|+ |.+++| .-|++++ ++++.+.+.. .+. ..+..+..+.+.+|.++..|+.
T Consensus 174 ~~~Sf~~~K~l~~g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~ 252 (379)
T PRK11658 174 AIFSFHAIKNITCA-EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAK 252 (379)
T ss_pred EEEeCCCCCcCccc-CceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHH
Confidence 555554 778765 3344565 3777665532 110 0112344566777777777776
Q ss_pred HhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 200 LETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 200 ~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++ ..++-+++.+++.+.|+++
T Consensus 253 l~~--~~~~r~~~a~~~~~~L~~~ 274 (379)
T PRK11658 253 LEA--LNARRREIAARYLQALADL 274 (379)
T ss_pred HHH--HHHHHHHHHHHHHHHhcCC
Confidence 654 6788888888888888754
No 316
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=85.04 E-value=0.57 Score=39.94 Aligned_cols=146 Identities=18% Similarity=0.163 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-HHhCCc--cccccch-h-------hhhcCCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-VQVGFG--RVGTHWW-A-------FQLQGDDII 143 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-v~tG~G--rtG~~~~-~-------~~~~g~~v~ 143 (224)
+++|++.++....+..++++|.+|--.-..|-.+.+.+.++.+.++ -..|.- --|.-+| + ...+- --
T Consensus 108 ~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~--~~ 185 (290)
T PF01212_consen 108 PEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIA--AG 185 (290)
T ss_dssp HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH--TT
T ss_pred HHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHh--hh
Confidence 6778888876544556899999997666545567788899999998 111110 0011000 0 11111 23
Q ss_pred Cchhc--ccccccCCccccc-ceecHHHHHhhhcCCccccc--CCCCcHHHHHH-HHHHHHHHhh-hhHHHHHHHHHHHH
Q psy6205 144 PDIVT--VGKPMGNGHPVAA-VITTKEIAKSFQETGVEYFN--TYGGNPVSCAV-ANAVMEVLET-ENLREHALDVGNQL 216 (224)
Q Consensus 144 pDi~~--~~K~l~~G~p~~a-v~~~~~i~~~~~~~~~~~~~--T~~~~p~~~aa-a~a~l~~~~~-~~l~~~~~~~g~~l 216 (224)
-|+++ +.|.++ .|.++ ++++++..+........+++ .-.|-+.++.. -.+.+..++. .....+..++.++|
T Consensus 186 ~D~v~~~~tK~~g--~~~Gavl~~~~~~i~~~~~~~k~~gg~~~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~L 263 (290)
T PF01212_consen 186 ADSVSFGGTKNGG--APGGAVLAGNKEFIAKARRQRKRLGGGMRQAGVLAAAELYQFAALRALELWLERARHANAMAKRL 263 (290)
T ss_dssp SSEEEEETTSTT---SSSEEEEEESHHHHHHHHHHHHHHTHHHHHTTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCH
T ss_pred CCEEEEEEEcccc--cccceEEEechHHHHHHHHHHHHhccCeeecceeeeechhhHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 57665 566554 33333 66688854433211011111 11221222000 0123333332 35677788899999
Q ss_pred HHhhhhcC
Q psy6205 217 HTPKKENN 224 (224)
Q Consensus 217 ~~~l~~l~ 224 (224)
.+.|++++
T Consensus 264 a~~l~~~~ 271 (290)
T PF01212_consen 264 AAGLEALG 271 (290)
T ss_dssp HHCHHEEC
T ss_pred HHHHHHCC
Confidence 99988764
No 317
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=84.86 E-value=4 Score=35.76 Aligned_cols=75 Identities=15% Similarity=0.104 Sum_probs=43.4
Q ss_pred Cchh--cccccccC--Ccccccceec-HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q psy6205 144 PDIV--TVGKPMGN--GHPVAAVITT-KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHT 218 (224)
Q Consensus 144 pDi~--~~~K~l~~--G~p~~av~~~-~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~ 218 (224)
.||+ .++|.++| +.-.|+++++ +++.+.+... ....+...+|..+..++..|+.+.. ..++.+++.+.+.+
T Consensus 188 ~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~--~~~~g~~~s~~~a~l~~~~l~tl~~--r~~~~~~~a~~l~~ 263 (366)
T PRK08247 188 ADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYY--QNAAGAVLSPFDSWLLIRGMKTLAL--RMRQHEENAKAIAA 263 (366)
T ss_pred CcEEEeecceeccCCCceeeeEEecChHHHHHHHHHH--HHhcCCCCChHHHHHHHhccCcHHH--HHHHHHHHHHHHHH
Confidence 5665 48999986 2456667775 6676665422 1223445678877777777765532 22333445555555
Q ss_pred hhhh
Q psy6205 219 PKKE 222 (224)
Q Consensus 219 ~l~~ 222 (224)
.|++
T Consensus 264 ~L~~ 267 (366)
T PRK08247 264 FLNE 267 (366)
T ss_pred HHHh
Confidence 5543
No 318
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=84.83 E-value=9.4 Score=34.88 Aligned_cols=80 Identities=26% Similarity=0.256 Sum_probs=48.4
Q ss_pred Cchhcc--ccccc-----CCcccccceecHHHHHhhhcC-----Cccc------------ccCCCCcHHHHHHHHHHHHH
Q psy6205 144 PDIVTV--GKPMG-----NGHPVAAVITTKEIAKSFQET-----GVEY------------FNTYGGNPVSCAVANAVMEV 199 (224)
Q Consensus 144 pDi~~~--~K~l~-----~G~p~~av~~~~~i~~~~~~~-----~~~~------------~~T~~~~p~~~aaa~a~l~~ 199 (224)
.|+++. -|.++ ||--+|.+.+++++.+.+... +..+ .-.++++.+.+.++...+..
T Consensus 262 aD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~ 341 (481)
T PRK04366 262 FDVVHLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRS 341 (481)
T ss_pred CCEEEEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHH
Confidence 688764 38876 233355677888777766311 0001 11334555666666677777
Q ss_pred HhhhhH---HHHHHHHHHHHHHhhhhc
Q psy6205 200 LETENL---REHALDVGNQLHTPKKEN 223 (224)
Q Consensus 200 ~~~~~l---~~~~~~~g~~l~~~l~~l 223 (224)
+-.+++ .++..++.++|.++|+++
T Consensus 342 ~G~~Gl~~~a~~~~~~a~~l~~~L~~~ 368 (481)
T PRK04366 342 LGAEGLREVSEDAVLNANYLKARLKDI 368 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHhh
Confidence 655544 455677899999999764
No 319
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=84.56 E-value=7.6 Score=34.08 Aligned_cols=77 Identities=16% Similarity=0.152 Sum_probs=45.2
Q ss_pred Cchhccc----ccccCCcccccceecHHHHHhhh---cCCc----------------ccccCCCCcHHHHHHHHHHHHHH
Q psy6205 144 PDIVTVG----KPMGNGHPVAAVITTKEIAKSFQ---ETGV----------------EYFNTYGGNPVSCAVANAVMEVL 200 (224)
Q Consensus 144 pDi~~~~----K~l~~G~p~~av~~~~~i~~~~~---~~~~----------------~~~~T~~~~p~~~aaa~a~l~~~ 200 (224)
-|+.++| |.++.|.--+.++.++++.+.+. ..+. ..+.++-.+.+.+|.+++-|+.+
T Consensus 170 ~~~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l 249 (375)
T PRK11706 170 GHIGCFSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAA 249 (375)
T ss_pred cCEEEEeCCCCccccccCCeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHH
Confidence 3777888 99964321223445677776432 1110 01244555678888888888887
Q ss_pred hhhhHHHHHHHHHHHHHHhhhh
Q psy6205 201 ETENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 201 ~~~~l~~~~~~~g~~l~~~l~~ 222 (224)
++ ..++-+++.+++.+.|..
T Consensus 250 ~~--~~~~R~~~~~~~~~~L~~ 269 (375)
T PRK11706 250 DR--INQRRLALWQRYYDALAP 269 (375)
T ss_pred HH--HHHHHHHHHHHHHHHhcC
Confidence 44 455566666666666654
No 320
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=84.19 E-value=9.4 Score=33.33 Aligned_cols=144 Identities=18% Similarity=0.107 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-HHhCCc--cccccch-hhhhcCCC-----CCCc
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-VQVGFG--RVGTHWW-AFQLQGDD-----IIPD 145 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-v~tG~G--rtG~~~~-~~~~~g~~-----v~pD 145 (224)
+++|++.+..-+-+......+++|--..++|. ++|.++++.+.++ -.-|+- --|.-+| +.-.+|+. ---|
T Consensus 114 ~e~v~~~i~~~d~~~~~~~~~~~e~~~te~Gt-Vy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D 192 (342)
T COG2008 114 PEDVEAAIRPDDIHHAPTPLAVLENTATEGGT-VYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVD 192 (342)
T ss_pred HHHHHHhhcCCCcccCCCceEEEeeccCCCce-ecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCC
Confidence 46666655431113345567777776667775 6677888888888 111110 0011011 11111100 1135
Q ss_pred hh--cccccccCCcccccc-eecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 146 IV--TVGKPMGNGHPVAAV-ITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 146 i~--~~~K~l~~G~p~~av-~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
.+ +++|++ |.|.+++ +++.++...+...-...+.-+.=.-+-.|+++..|+-----..-.+.+++.++|.++|+
T Consensus 193 ~v~~~~tK~g--~~~~gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~~ 269 (342)
T COG2008 193 SVSFCLTKGG--GAPVGAIVFGNRDFAKRARRWRKRAGGLMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGLE 269 (342)
T ss_pred EEEEecccCC--cceeeeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhhh
Confidence 54 445544 4555555 55777766654321122222221123334444433321111234445566888888776
No 321
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=84.02 E-value=0.89 Score=40.92 Aligned_cols=20 Identities=35% Similarity=0.793 Sum_probs=17.9
Q ss_pred CCC-cceeeccCCceeEEEEe
Q psy6205 3 RYP-LIGDVRGIGLFVGVELV 22 (224)
Q Consensus 3 ~~p-~v~~vRg~Gl~~gielv 22 (224)
+|| .++++||.|+|+++|+.
T Consensus 361 ~~~~~i~~vrg~G~~~~i~~~ 381 (431)
T TIGR03251 361 EFPHLVSNPRGRGLMCAFDLP 381 (431)
T ss_pred hCccceecccccceeEEEEeC
Confidence 478 88999999999999994
No 322
>PLN03032 serine decarboxylase; Provisional
Probab=83.92 E-value=18 Score=31.97 Aligned_cols=139 Identities=15% Similarity=0.115 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-------------HHhCCccccccchhhh----h
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-------------VQVGFGRVGTHWWAFQ----L 137 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-------------v~tG~GrtG~~~~~~~----~ 137 (224)
+++|++.++. ...+..+|++--...+-|.+-|-++.-+.+++. .+.|+ . ..+. .
T Consensus 148 ~~~L~~~i~~---~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~-~-----~p~~~~~~~ 218 (374)
T PLN03032 148 YDDLERALAK---NRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGL-M-----MPFVSRAPE 218 (374)
T ss_pred HHHHHHHHHH---cCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhh-h-----hhccCCCcc
Confidence 5667776653 233556666655556688888888777777763 11111 0 0010 0
Q ss_pred cCCCCCCchhccc-ccccC-CcccccceecHHHHHhhhcCCcccc----cCCCCcH--HHHHHHHHHHHHHhhhh---HH
Q psy6205 138 QGDDIIPDIVTVG-KPMGN-GHPVAAVITTKEIAKSFQETGVEYF----NTYGGNP--VSCAVANAVMEVLETEN---LR 206 (224)
Q Consensus 138 ~g~~v~pDi~~~~-K~l~~-G~p~~av~~~~~i~~~~~~~~~~~~----~T~~~~p--~~~aaa~a~l~~~~~~~---l~ 206 (224)
+......|.++++ --+++ -.+.|+++.+++..+.+.... .+. .|..|.- ...+..-++|..+-.++ ..
T Consensus 219 ~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~~~-~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~ 297 (374)
T PLN03032 219 VTFRKPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQNV-EYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDV 297 (374)
T ss_pred cCCCcCCcEEEECcccccCCCcCeEEEEEEchhhHhhccCC-cccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHH
Confidence 1100235655543 22444 478899999988877664321 111 3555553 45566677888885544 56
Q ss_pred HHHHHHHHHHHHhhhhc
Q psy6205 207 EHALDVGNQLHTPKKEN 223 (224)
Q Consensus 207 ~~~~~~g~~l~~~l~~l 223 (224)
+++-++.++|.++|++.
T Consensus 298 ~~~~~~a~~l~~~l~~~ 314 (374)
T PLN03032 298 QHCMRNAHYLKDRLTEA 314 (374)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 67778899999998875
No 323
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=83.75 E-value=2.6 Score=37.18 Aligned_cols=48 Identities=17% Similarity=0.125 Sum_probs=35.3
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHH
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVM 197 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l 197 (224)
+|||..+ .|+-+|.+++++++++.+... ....+++.++++.+++.+.+
T Consensus 242 S~SK~~~~~GlRiG~~~~~~~l~~~~~~~--~~~~~~~~~~~~q~a~~~~~ 290 (396)
T PRK09147 242 SLSKRSNVPGLRSGFVAGDAALLKKFLLY--RTYHGCAMPPAVQAASIAAW 290 (396)
T ss_pred ccccccCCccceeeeecCCHHHHHHHHHH--hhhcccCCCHHHHHHHHHHh
Confidence 6999875 579999999999999887642 12245566777777776666
No 324
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=83.62 E-value=3.2 Score=36.07 Aligned_cols=72 Identities=13% Similarity=0.085 Sum_probs=45.6
Q ss_pred ccccccc-CCccccccee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhhhhc
Q psy6205 148 TVGKPMG-NGHPVAAVIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|||.+| .|+-+|.+++ ++++.+.+... ...+.-+.++..++.+.|+--+- +...+.+++.-+++.+.|+++
T Consensus 210 S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~----~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 284 (354)
T PRK06358 210 AFTKFFAIPGLRLGYGLTSNKNLAEKLLQM----REPWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEF 284 (354)
T ss_pred echhhccCcchhheeeecCCHHHHHHHHHh----CCCCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6899999 8999999988 47777777542 12455666777777776632100 223344555556666666543
No 325
>PRK05367 glycine dehydrogenase; Provisional
Probab=83.62 E-value=6.6 Score=39.17 Aligned_cols=141 Identities=17% Similarity=0.171 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcc-cCCHHHHHHHHHH---H-HhCCccccccchhhhhcCCCCCCchhcc
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQI-IPPANYLREVYKH---V-QVGFGRVGTHWWAFQLQGDDIIPDIVTV 149 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~-~~~~~~l~~~~~~---v-~tG~GrtG~~~~~~~~~g~~v~pDi~~~ 149 (224)
+++|++.++ .+.+++++|++-- ....|.+ .+-+++.+.+++. + .-|- -.+. ......-+ ..-.|++++
T Consensus 627 ~~~L~~~i~---~~~~~la~V~it~-pst~G~~e~~I~eI~~i~h~~G~~v~VDgA-~~~a-l~~l~~pg-~~GADi~~~ 699 (954)
T PRK05367 627 LDDLRAKAE---EHADNLAAIMITY-PSTHGVFEETIREICEIVHEHGGQVYLDGA-NMNA-QVGLARPG-DIGADVSHL 699 (954)
T ss_pred HHHHHHHHh---ccCCCeEEEEEEc-CCCCeeecCCHHHHHHHHHHcCCEEEEECc-Chhh-ccCCCChh-hcCCCEEEe
Confidence 456665554 2345677776643 2223443 5566666666665 1 0011 0000 00111111 123688877
Q ss_pred c--cccc----CC-cccccceecHHHHHhhhcCCc---cc---ccCCCCcHH----HHHHHHHHHHHHhhhhHHHHHH--
Q psy6205 150 G--KPMG----NG-HPVAAVITTKEIAKSFQETGV---EY---FNTYGGNPV----SCAVANAVMEVLETENLREHAL-- 210 (224)
Q Consensus 150 ~--K~l~----~G-~p~~av~~~~~i~~~~~~~~~---~~---~~T~~~~p~----~~aaa~a~l~~~~~~~l~~~~~-- 210 (224)
+ |.++ +| --+|.+.+++++...+..... .. .++....+. .+-.+..-|..+=.+++.+.++
T Consensus 700 s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~~~ 779 (954)
T PRK05367 700 NLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATEVA 779 (954)
T ss_pred cCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH
Confidence 6 8775 33 345667777766655433210 00 011111122 2222334444444566766666
Q ss_pred -HHHHHHHHhhhh
Q psy6205 211 -DVGNQLHTPKKE 222 (224)
Q Consensus 211 -~~g~~l~~~l~~ 222 (224)
.+.+|+.++|++
T Consensus 780 ~~~A~Yl~~~L~~ 792 (954)
T PRK05367 780 ILNANYIAKRLKD 792 (954)
T ss_pred HHHHHHHHHHHHh
Confidence 899999999865
No 326
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=83.56 E-value=1.8 Score=38.31 Aligned_cols=21 Identities=38% Similarity=0.860 Sum_probs=18.4
Q ss_pred CCCcceeeccCCceeEEEEee
Q psy6205 3 RYPLIGDVRGIGLFVGVELVT 23 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~ 23 (224)
+|+.+.++||.|+++++|++.
T Consensus 321 ~~~~~~~vrg~G~~~~i~~~~ 341 (397)
T TIGR03246 321 RYNVFSEIRGKGLLIGAVLTE 341 (397)
T ss_pred cCCCeEeeecCceEEEEEEcC
Confidence 367789999999999999964
No 327
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=83.51 E-value=5.2 Score=35.16 Aligned_cols=119 Identities=13% Similarity=-0.016 Sum_probs=65.7
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchhc--ccccccC-C-ccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN-G-HPVAA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~-G-~p~~a 161 (224)
+..+|++|-.-.-.|.+..-+...+.+++. |-.-|+ ++. .+...+ .-.|+++ +.|-++| | .--|+
T Consensus 136 ~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD~t~~-~~~---~~~pl~--~gaDivv~S~tK~l~g~~d~~gG~ 209 (364)
T PRK07269 136 DTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVDNTFY-SPI---YQRPIE--LGADIVLHSATKYLSGHNDVLAGV 209 (364)
T ss_pred CceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEECCCc-ccc---cCCchh--hCCcEEEecCceeccCCCcccceE
Confidence 456788887655566666656666666665 111121 111 112222 4478876 5688875 4 33445
Q ss_pred cee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHH
Q psy6205 162 VIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLH 217 (224)
Q Consensus 162 v~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~ 217 (224)
+++ ++++++.+... ........+|..++.++..|+-+.. +...++++.+.+.|.
T Consensus 210 v~~~~~~l~~~~~~~--~~~~G~~~s~~~a~l~~~~L~tL~~r~~~~~~na~~~a~~L~ 266 (364)
T PRK07269 210 VVTNDLELYEKLFYN--LNTTGAVLSPFDSYLLMRGLKTLSLRMERSTANAQEVVAFLK 266 (364)
T ss_pred EEeCcHHHHHHHHHH--HHHhCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 566 46677666421 1112356789999999888887742 233344444444443
No 328
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=83.19 E-value=3.4 Score=35.85 Aligned_cols=72 Identities=6% Similarity=0.058 Sum_probs=44.9
Q ss_pred ccccccc-CCccccccee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 148 TVGKPMG-NGHPVAAVIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVL-ETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~-~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++|.++ .|+-+|.+++ ++++.+.+... ...++-++++.+++.+.|+-- ......+.+++.-+++.+.|+++
T Consensus 209 S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 283 (356)
T PRK08056 209 SLTKFYAIPGLRLGYLVNSDDAAVARMRRQ----QMPWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCAL 283 (356)
T ss_pred echhhccCcchhheeeecCCHHHHHHHHHh----CCCCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6899999 7899999998 46777776532 234555666666666666310 01233444556666666666553
No 329
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=82.74 E-value=16 Score=36.39 Aligned_cols=140 Identities=14% Similarity=0.121 Sum_probs=77.5
Q ss_pred HHHHHHHHHHHccCCCCceEEEEc-cccCCCCcccC-CHHHHHHHHHH----HHhCCccccccchhhhhcCCCCCCchhc
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAE-SLQSCGGQIIP-PANYLREVYKH----VQVGFGRVGTHWWAFQLQGDDIIPDIVT 148 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~E-pv~~~~G~~~~-~~~~l~~~~~~----v~tG~GrtG~~~~~~~~~g~~v~pDi~~ 148 (224)
+++|++.++. +++++++|++. |-. .|.+.+ -++..+.+.+. ..-|---.+ ......-+ +.-.|+++
T Consensus 615 le~L~~~i~~---~~~~taaV~iT~pst--~G~~e~~I~eI~~iah~~G~~v~VDgAq~~a--l~~l~~Pg-~~GaDi~~ 686 (939)
T TIGR00461 615 LVDLKNKAEQ---HGDELAAVMVTYPST--HGVFEPTIQHACDIVHSFGGQVYLDGANMNA--QVGLTSPG-DLGADVCH 686 (939)
T ss_pred HHHHHHHHhh---cCCceEEEEEEeCCc--CceecccHHHHHHHHHHcCCEEEEEecChhh--CCCCCCcc-ccCCCEEE
Confidence 5677776652 45688888775 432 466655 44555555544 000000000 00000001 13379988
Q ss_pred c--ccccc-----CCcccccceecHHHHHhhhcCC---------cc-c---c-cCCCCcHHHHHHHHHHHHHHhhhhH--
Q psy6205 149 V--GKPMG-----NGHPVAAVITTKEIAKSFQETG---------VE-Y---F-NTYGGNPVSCAVANAVMEVLETENL-- 205 (224)
Q Consensus 149 ~--~K~l~-----~G~p~~av~~~~~i~~~~~~~~---------~~-~---~-~T~~~~p~~~aaa~a~l~~~~~~~l-- 205 (224)
+ .|.++ ||--+|.+.+++++...+.... +. + . +.+.++.+.+-.+...|..+=.+++
T Consensus 687 ~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~ 766 (939)
T TIGR00461 687 LNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPK 766 (939)
T ss_pred ecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHH
Confidence 7 59887 5555788888877655443210 00 1 1 2367777777777777888865554
Q ss_pred -HHHHHHHHHHHHHhhhh
Q psy6205 206 -REHALDVGNQLHTPKKE 222 (224)
Q Consensus 206 -~~~~~~~g~~l~~~l~~ 222 (224)
.+..-.+..|+.++|++
T Consensus 767 ~a~~ailnAnYl~~rL~~ 784 (939)
T TIGR00461 767 ASVVAILNANYMATRLKD 784 (939)
T ss_pred HHHHHHHHHHHHHHHhhc
Confidence 44455678888888865
No 330
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=82.13 E-value=20 Score=32.37 Aligned_cols=26 Identities=15% Similarity=0.448 Sum_probs=21.3
Q ss_pred ccccccc-CCccccccee-cHHHHHhhh
Q psy6205 148 TVGKPMG-NGHPVAAVIT-TKEIAKSFQ 173 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~-~~~i~~~~~ 173 (224)
.|||.+| .|+=+|++++ ++++.+.+.
T Consensus 276 s~SK~fg~~GlRvG~ivs~n~~l~~~~~ 303 (447)
T PLN02607 276 SLSKDLGLPGFRVGTIYSYNDKVVTTAR 303 (447)
T ss_pred cchhcCCCCcceEEEEEEcCHHHHHHHH
Confidence 6899998 7999999998 677776654
No 331
>PLN02368 alanine transaminase
Probab=82.10 E-value=4.1 Score=36.38 Aligned_cols=73 Identities=8% Similarity=-0.034 Sum_probs=50.0
Q ss_pred ccccccc--CCcccccce---ecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHH-----------Hhh-hhHHHHHH
Q psy6205 148 TVGKPMG--NGHPVAAVI---TTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEV-----------LET-ENLREHAL 210 (224)
Q Consensus 148 ~~~K~l~--~G~p~~av~---~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~-----------~~~-~~l~~~~~ 210 (224)
+|||.+. .|+-+|.++ +.+++++.+... ...+++.|.++-.++.+.|+- .++ .++.+..+
T Consensus 288 SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~---~~~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (407)
T PLN02368 288 TVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKV---ASIALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLR 364 (407)
T ss_pred cCCcccccCCccceEEEEEeCCCHHHHHHHHHH---hcccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHH
Confidence 5799984 689899988 488888887653 123556677888888887742 222 23566667
Q ss_pred HHHHHHHHhhhhc
Q psy6205 211 DVGNQLHTPKKEN 223 (224)
Q Consensus 211 ~~g~~l~~~l~~l 223 (224)
+.-+.+.+.|+++
T Consensus 365 ~rr~~~~~~L~~~ 377 (407)
T PLN02368 365 RRARMMTDGFNSC 377 (407)
T ss_pred HHHHHHHHHHhCC
Confidence 7777777777754
No 332
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=81.38 E-value=3.1 Score=35.98 Aligned_cols=71 Identities=15% Similarity=0.150 Sum_probs=46.5
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++| .+ .|+.+|.+++++++++.+.... ..+..+.++.+++...++..+ -++..+++++.-+++.+.|+++
T Consensus 215 S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~----~~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 287 (356)
T PRK04870 215 TVSK-LGLAGLRLGYLAGHPAWIAELDKVR----PPYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAAL 287 (356)
T ss_pred cchh-hhhHHHhhhhhhCCHHHHHHHHHcc----CCCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 6899 65 4789999999999998886431 234556676666666664321 1234555666666677766654
No 333
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=81.32 E-value=33 Score=29.32 Aligned_cols=111 Identities=15% Similarity=0.217 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCch
Q psy6205 72 VKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 72 ~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
+.+.+-+|++.+ +.++.++..++.=+-|+-|.++.-+.+-+-+++. .-|.+ -.|+ +=.. .- .+.+|.
T Consensus 140 e~y~~viee~~~---~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AY-t~Gr-mpvs-~k--e~g~DF 211 (382)
T COG1103 140 EGYAEVIEEVKD---EGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAY-TVGR-MPVS-GK--EIGADF 211 (382)
T ss_pred HHHHHHHHHHHh---ccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecce-eecc-cccc-cc--ccCCCE
Confidence 345666666665 3557788777777888889999999999999998 33333 3444 2112 11 277998
Q ss_pred hccc--ccccCCcccccceecHHHHHhhhcCC-c--------ccccCCCCcHHHH
Q psy6205 147 VTVG--KPMGNGHPVAAVITTKEIAKSFQETG-V--------EYFNTYGGNPVSC 190 (224)
Q Consensus 147 ~~~~--K~l~~G~p~~av~~~~~i~~~~~~~~-~--------~~~~T~~~~p~~~ 190 (224)
++=| |+++..-|+|.+.+++|..+..-..+ + .++-|-.|-|+..
T Consensus 212 iVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivT 266 (382)
T COG1103 212 IVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVT 266 (382)
T ss_pred EEecCccchhccCCeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHH
Confidence 8754 88886669999999999988754321 1 2345666777643
No 334
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=81.27 E-value=7.9 Score=33.91 Aligned_cols=78 Identities=12% Similarity=0.175 Sum_probs=50.5
Q ss_pred chhcc--cccccCCcc-cccceecHHHHHhhhcC-Cc--------ccccCC-CCcHHHHHHHHHHHHHHhhh----hHHH
Q psy6205 145 DIVTV--GKPMGNGHP-VAAVITTKEIAKSFQET-GV--------EYFNTY-GGNPVSCAVANAVMEVLETE----NLRE 207 (224)
Q Consensus 145 Di~~~--~K~l~~G~p-~~av~~~~~i~~~~~~~-~~--------~~~~T~-~~~p~~~aaa~a~l~~~~~~----~l~~ 207 (224)
|++++ =|.+| -| +|.+.++++..+.+.+. .. ....|+ +-|-....+..++|+++.++ ++.+
T Consensus 188 d~~~~ssqK~lg--P~Glg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~ 265 (360)
T PRK05355 188 GLIYAGAQKNIG--PAGLTIVIVREDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEK 265 (360)
T ss_pred cEEEEecccccc--CCceEEEEECHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHH
Confidence 34443 37773 33 67789999988776441 10 001222 23444666677889998654 5777
Q ss_pred HHHHHHHHHHHhhhhcC
Q psy6205 208 HALDVGNQLHTPKKENN 224 (224)
Q Consensus 208 ~~~~~g~~l~~~l~~l~ 224 (224)
+.+++.+++++.|++++
T Consensus 266 r~~~l~~~l~~~l~~~~ 282 (360)
T PRK05355 266 RNQEKAALLYDAIDSSD 282 (360)
T ss_pred HHHHHHHHHHHHHHhCC
Confidence 78899999999998764
No 335
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=81.26 E-value=24 Score=30.88 Aligned_cols=39 Identities=10% Similarity=0.186 Sum_probs=29.4
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 183 YGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 183 ~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+..+.+..+.+++.|+.+ +...++-+++.+++.+.|+.+
T Consensus 240 ~~m~~l~aa~g~~qL~~l--~~~~~~r~~~~~~~~~~L~~~ 278 (380)
T TIGR03588 240 YRMTDIQAALGLSQLKKL--DRFVAKRREIAARYDRLLKDL 278 (380)
T ss_pred cCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcCC
Confidence 444677778888877776 447778888889998888764
No 336
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=81.12 E-value=24 Score=31.43 Aligned_cols=125 Identities=15% Similarity=0.155 Sum_probs=75.0
Q ss_pred CceEEEE-ccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCC--c----hhcccc
Q psy6205 91 RPCAFFA-ESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIP--D----IVTVGK 151 (224)
Q Consensus 91 ~iaavi~-Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~p--D----i~~~~K 151 (224)
++-+|++ -|--- .| ...+++.++.+.++ +..+|--.|. .+.+ -.. +.+ | +-.|||
T Consensus 163 ktk~i~ln~P~NP-TG-av~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~-~~~s-~~~--~~~~~~~~i~i~s~SK 236 (393)
T COG0436 163 KTKAIILNSPNNP-TG-AVYSKEELKAIVELAREHDIIIISDEIYEELVYDGA-EHPS-ILE--LAGARDRTITINSFSK 236 (393)
T ss_pred cceEEEEeCCCCC-cC-cCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCC-CcCC-Hhh--cCCCcceEEEEecccc
Confidence 4445554 56322 23 35678888888888 6666544442 0111 111 233 2 225899
Q ss_pred ccc-CCcccccceec-HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHhhhhc
Q psy6205 152 PMG-NGHPVAAVITT-KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET----ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 152 ~l~-~G~p~~av~~~-~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~----~~l~~~~~~~g~~l~~~l~~l 223 (224)
..+ -|+=+|.+++. +++.+.+..- ....+++.+.++-.+|.++|+--++ +...+..++.-+.+.+.|+++
T Consensus 237 ~~~mtGwRvG~~v~~~~~l~~~~~~~--~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~ 312 (393)
T COG0436 237 TYGMTGWRIGWVVGPPEELIAALRKL--KSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEI 312 (393)
T ss_pred cccccccceeEeecChHHHHHHHHHH--HHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999 68999999999 8888877521 2235667777788888888874321 122245666666777777654
No 337
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=81.05 E-value=3.2 Score=36.52 Aligned_cols=49 Identities=16% Similarity=0.100 Sum_probs=35.3
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHH
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVME 198 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~ 198 (224)
++||..+ .|+=+|++++++++.+.+... ....+++.+++...++.+.++
T Consensus 241 S~SK~~~~~GlRvG~~i~~~~l~~~~~~~--~~~~~~~~~~~~q~~~~~~l~ 290 (393)
T TIGR03538 241 SLSKRSNLPGLRSGFVAGDAEILKAFLRY--RTYHGCAMPIPTQLASIAAWN 290 (393)
T ss_pred cchhhcCCcccceEEEecCHHHHHHHHHH--HHhhccCcCHHHHHHHHHHhc
Confidence 6899865 578999999999998877542 112345567777777777663
No 338
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=80.91 E-value=4.9 Score=35.17 Aligned_cols=112 Identities=20% Similarity=0.155 Sum_probs=62.1
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH----------HHhCCccccccchhhhhcCCCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH----------VQVGFGRVGTHWWAFQLQGDDIIP 144 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----------v~tG~GrtG~~~~~~~~~g~~v~p 144 (224)
+++|++.+... ..+++.+|++-+-+.-.|...+..+ ++.+.++ +..-|. +.. ...... -.+
T Consensus 154 ~~~l~~~~~~~--~~~~~k~i~l~~P~NPTG~~~s~~~-l~~l~~~~~~~~iI~De~Y~~~~--~~~--~~~~~~--~~~ 224 (374)
T PRK02610 154 LAAAQSAIEQT--QNPPVRVVFVVHPNSPTGNPLTAAE-LEWLRSLPEDILVVIDEAYFEFS--QTT--LVGELA--QHP 224 (374)
T ss_pred HHHHHHHHHhh--cCCCceEEEEeCCCCCCCCCCCHHH-HHHHHhccCCcEEEEeccccccC--ccc--hHHHHh--cCC
Confidence 35555555421 1245667766554554777665544 4555544 222221 100 001111 113
Q ss_pred chh---ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHH
Q psy6205 145 DIV---TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEV 199 (224)
Q Consensus 145 Di~---~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~ 199 (224)
.++ +|||.+| .|+-+|.+++++++.+.+.... ..++.+.++-.++.++|+.
T Consensus 225 ~~ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~~----~~~~~~~~~q~a~~~~l~~ 279 (374)
T PRK02610 225 NWVILRTFSKAFRLAAHRVGYAIGHPELIAVLEKVR----LPYNLPSFSQLAAQLALEH 279 (374)
T ss_pred CEEEEEecchhccCcccceeeeecCHHHHHHHHHhc----CCCCCCHHHHHHHHHHhcC
Confidence 333 6899996 6899999999999998886431 2344566776666666653
No 339
>PRK08114 cystathionine beta-lyase; Provisional
Probab=80.11 E-value=7 Score=34.90 Aligned_cols=120 Identities=13% Similarity=0.083 Sum_probs=74.2
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-------HHhCCccccccchhhhhcCCCCCCchhc--ccccccC-C-ccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN-G-HPV 159 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~-G-~p~ 159 (224)
+...|.+|.+....|.+.+-+...+.+++. |-.-| -++. . ++-.. .-.|+++ .-|-|+| + .-.
T Consensus 147 ~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDnT~-a~p~-~--~~pl~--~GaDivv~S~tKyl~Ghsdv~~ 220 (395)
T PRK08114 147 NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDNTW-AAGV-L--FKALD--FGIDISIQAGTKYLVGHSDAMI 220 (395)
T ss_pred CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEECCC-cccc-c--cCHHH--cCCcEEEEcCcccccCCCccee
Confidence 568999999988889999888888888874 11112 1232 2 22222 3388886 6799987 4 566
Q ss_pred ccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHH
Q psy6205 160 AAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHT 218 (224)
Q Consensus 160 ~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~ 218 (224)
|+++.+++..+.+....... --..+|..|-..+..|+-+. =+.-.+++.++.++|++
T Consensus 221 G~v~~~~~~~~~l~~~~~~~--G~~~~p~~a~l~~rgl~TL~lR~~~~~~na~~va~~L~~ 279 (395)
T PRK08114 221 GTAVANARCWEQLRENSYLM--GQMVDADTAYMTSRGLRTLGVRLRQHEESSLKVAEWLAE 279 (395)
T ss_pred EEEEcCHHHHHHHHHHHHhc--cCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHc
Confidence 76777877766554221111 12456777776666666552 24556667777777654
No 340
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=79.93 E-value=1.9 Score=38.59 Aligned_cols=21 Identities=52% Similarity=0.874 Sum_probs=17.8
Q ss_pred CCC-cceeeccCCceeEEEEee
Q psy6205 3 RYP-LIGDVRGIGLFVGVELVT 23 (224)
Q Consensus 3 ~~p-~v~~vRg~Gl~~gielv~ 23 (224)
.+| .+.++||.|+|.++||..
T Consensus 337 ~~~~~~~~vrg~Gl~~~l~l~~ 358 (412)
T TIGR02407 337 EYPELIKQVRGRGLMQGIECGD 358 (412)
T ss_pred hCCCceEeeecceeEEEEEecC
Confidence 466 578999999999999954
No 341
>PLN02724 Molybdenum cofactor sulfurase
Probab=79.70 E-value=6.9 Score=38.27 Aligned_cols=129 Identities=17% Similarity=0.184 Sum_probs=73.9
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHHHHhCCccccccch---hhhhcC---CC---CCCchhccc--ccccCC-cc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKHVQVGFGRVGTHWW---AFQLQG---DD---IIPDIVTVG--KPMGNG-HP 158 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~v~tG~GrtG~~~~---~~~~~g---~~---v~pDi~~~~--K~l~~G-~p 158 (224)
++..|.+--+....|.+.|-+ .++.+++.....+.+.|...+ +.|..| ++ +.+|.++++ |-+| | .-
T Consensus 192 ~t~LVa~~~vsN~tG~i~pi~-~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv~~~~~Dfl~~S~HK~~G-gP~G 269 (805)
T PLN02724 192 AYNLFAFPSECNFSGAKFPLD-LVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDLSRYPADFVVVSFYKIFG-YPTG 269 (805)
T ss_pred CcceEEEEccccCCCCcCCHH-HHHHHHHhcccccccCcceEEEeehhhhcCCCCCChhhcCCCEEEEecceecc-CCCC
Confidence 344566655666788888876 344444431000000110000 111111 11 348988763 6553 3 34
Q ss_pred cccceecHHHHHhhhcCCcccc-cC---------C--------------CCcHHHHHHHHHHHHHHhh---hhHHHHHHH
Q psy6205 159 VAAVITTKEIAKSFQETGVEYF-NT---------Y--------------GGNPVSCAVANAVMEVLET---ENLREHALD 211 (224)
Q Consensus 159 ~~av~~~~~i~~~~~~~~~~~~-~T---------~--------------~~~p~~~aaa~a~l~~~~~---~~l~~~~~~ 211 (224)
+|++++++++.+.+.+. .++ .| | +-|..+.++..++|+.+++ +.+.++.++
T Consensus 270 ~G~L~vr~~~~~~l~p~--~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I~~~~~~ 347 (805)
T PLN02724 270 LGALLVRRDAAKLLKKK--YFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAIAMHTWA 347 (805)
T ss_pred ceEEEEehhhhhhhcCC--ccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHHHHHHHH
Confidence 68899999887766432 000 00 1 2456677777788888765 567888999
Q ss_pred HHHHHHHhhhhc
Q psy6205 212 VGNQLHTPKKEN 223 (224)
Q Consensus 212 ~g~~l~~~l~~l 223 (224)
+.++|.++|+++
T Consensus 348 L~~~l~~~L~~l 359 (805)
T PLN02724 348 LTHYVANSLRNL 359 (805)
T ss_pred HHHHHHHHHHhc
Confidence 999999999865
No 342
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=79.48 E-value=8.9 Score=34.30 Aligned_cols=70 Identities=21% Similarity=0.198 Sum_probs=43.0
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchh--cccccccC-Ccccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN-GHPVAAV 162 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~-G~p~~av 162 (224)
++.+|++|......|.+.+-++..+.+++. |-.-++ ++. ...... ..+|++ +++|.+++ |..+|++
T Consensus 142 ~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD~t~~-~~~---~~~~l~--~g~Divv~S~sK~l~g~G~~lGg~ 215 (418)
T TIGR01326 142 NTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVDNTFA-TPY---LCRPID--HGADIVVHSATKYIGGHGTAIGGV 215 (418)
T ss_pred CCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCc-hhh---cCCchh--cCCeEEEECccccccCCccceEEE
Confidence 567899998776677777655555555554 111011 121 112222 347887 68999997 7889988
Q ss_pred eecH
Q psy6205 163 ITTK 166 (224)
Q Consensus 163 ~~~~ 166 (224)
++++
T Consensus 216 v~~~ 219 (418)
T TIGR01326 216 IVDG 219 (418)
T ss_pred EEec
Confidence 8854
No 343
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=79.46 E-value=6.2 Score=34.96 Aligned_cols=75 Identities=15% Similarity=0.170 Sum_probs=43.1
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcC---------CcccccCC-CCcHHHHHHHHHHHHH-Hh--hhhHHHHHHHHH
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQET---------GVEYFNTY-GGNPVSCAVANAVMEV-LE--TENLREHALDVG 213 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~---------~~~~~~T~-~~~p~~~aaa~a~l~~-~~--~~~l~~~~~~~g 213 (224)
+|||.++ .|+=+|.+++++++++.+... .....+++ +.+.++..++.++++- .. -+++.+.+++.-
T Consensus 246 SfSK~~~~pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r 325 (409)
T PRK07590 246 SFSKTAGFTGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENA 325 (409)
T ss_pred cCccccCCcCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Confidence 6999998 789999999999988732100 00111233 3455666666555531 11 123445555556
Q ss_pred HHHHHhhhh
Q psy6205 214 NQLHTPKKE 222 (224)
Q Consensus 214 ~~l~~~l~~ 222 (224)
+++.+.|++
T Consensus 326 ~~l~~~L~~ 334 (409)
T PRK07590 326 KIIREGLES 334 (409)
T ss_pred HHHHHHHHh
Confidence 666666654
No 344
>PRK05967 cystathionine beta-lyase; Provisional
Probab=79.20 E-value=8.1 Score=34.47 Aligned_cols=120 Identities=13% Similarity=0.051 Sum_probs=67.6
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchhc--ccccccC-C-ccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN-G-HPVAA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~-G-~p~~a 161 (224)
+..+|++|..-...+.+.+-++..+.+++. |-.=| -+.. .+-.-.+| .||++ +.|-++| | .-.|+
T Consensus 149 ~TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD~t~-a~p~-~~~pl~~G----aDivv~S~tKy~~Gh~d~~~G~ 222 (395)
T PRK05967 149 NTKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMDNTW-ATPL-YFRPLDFG----VDISIHAATKYPSGHSDILLGT 222 (395)
T ss_pred CceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEECCc-cCce-ecChhHcC----CCEEEEecccccCCCCCeeEEE
Confidence 567899996655545555544555555544 10001 1111 11111233 77774 7899987 3 66677
Q ss_pred ceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHH
Q psy6205 162 VITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHT 218 (224)
Q Consensus 162 v~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~ 218 (224)
++.++++.+.+....... --..+|..|-..+..|+-|. -+.-.+++.++.++|.+
T Consensus 223 v~~~~~~~~~l~~~~~~~--G~~~~p~da~l~~rgl~Tl~lR~~~~~~na~~lA~~L~~ 279 (395)
T PRK05967 223 VSANEKCWPQLLEAHGTL--GLCAGPDDTYQILRGLRTMGIRLEHHRKSALEIARWLEG 279 (395)
T ss_pred EEcCHHHHHHHHHHHHHc--CCCCCHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHh
Confidence 777877666554221111 22367888777777777663 24566777777777765
No 345
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=78.81 E-value=1.8 Score=38.04 Aligned_cols=56 Identities=16% Similarity=0.265 Sum_probs=38.1
Q ss_pred Cchhccc--ccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh
Q psy6205 144 PDIVTVG--KPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET 202 (224)
Q Consensus 144 pDi~~~~--K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~ 202 (224)
+|+|||| |.||| -.-|.+++++++.+.+... ...-.+--+-+..|+-.++|+.+.+
T Consensus 204 aDlV~fSGdKlLGG-PQaGiI~Gkk~lI~~lk~~--pl~RalrvdK~tla~L~atL~~Y~~ 261 (367)
T PF03841_consen 204 ADLVTFSGDKLLGG-PQAGIIVGKKELIEKLKKH--PLGRALRVDKLTLAALEATLRLYLD 261 (367)
T ss_dssp -SEEEEETTSSSSS--S-EEEEEEHHHHHHHHHH--HHTTT-B--HHHHHHHHHHHHH---
T ss_pred CCEEEEECCCcCCC-CCeEEEEeCHHHHHHHhhC--CCcceEeeCHHHHHHHHHHHHHHHH
Confidence 8999994 88875 2235589999999998754 3445677788999999999998853
No 346
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=78.74 E-value=3.2 Score=36.85 Aligned_cols=59 Identities=17% Similarity=0.243 Sum_probs=43.2
Q ss_pred CCCchhccc--ccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhh
Q psy6205 142 IIPDIVTVG--KPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETE 203 (224)
Q Consensus 142 v~pDi~~~~--K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~ 203 (224)
.-+|+|++| |.|+| -.-|.+++++++.+.+... ....-.--.+...|+-.++|+.+...
T Consensus 212 ~GaDLV~~SgdKllgG-PqaGii~GkKelI~~lq~~--~l~Ralrv~K~tla~l~~aLe~y~~~ 272 (395)
T COG1921 212 LGADLVSFSGDKLLGG-PQAGIIVGKKELIEKLQSH--PLKRALRVDKETLAALEAALELYLQP 272 (395)
T ss_pred cCCCEEEEecchhcCC-CccceEechHHHHHHHHhh--hhhhhhhcCcHhHHHHHHHHHHHcCc
Confidence 449999885 88864 1123389999999988765 33345556788999999999999754
No 347
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=78.72 E-value=9.2 Score=33.98 Aligned_cols=120 Identities=17% Similarity=0.078 Sum_probs=69.3
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchhc--ccccccC-C-ccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN-G-HPVAA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~-G-~p~~a 161 (224)
+..+|++|-...-.|.+.+.+...+.+++. |-.-+ -++. + +.-.. +-.|+++ +.|-++| + .-.|+
T Consensus 138 ~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvDea~-~~~~-~--~~pl~--~GaDivv~S~tK~l~G~~d~~gG~ 211 (388)
T PRK08861 138 KPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVDNTF-LTPV-L--QKPLE--LGADFVIHSTTKYINGHSDVIGGV 211 (388)
T ss_pred CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCc-cccc-c--CCCcc--cCCCEEEeecceeccCCCcceeEE
Confidence 567899986666678888877777766665 11111 1111 1 11121 3478775 6898876 3 44555
Q ss_pred ceec-HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-h-hhHHHHHHHHHHHHHH
Q psy6205 162 VITT-KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-T-ENLREHALDVGNQLHT 218 (224)
Q Consensus 162 v~~~-~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~-~~l~~~~~~~g~~l~~ 218 (224)
++++ +++.+.+... ........+|..+...+-.|+-|. + +.-.+++.++.++|.+
T Consensus 212 i~~~~~~~~~~~~~~--~~~~G~~~~p~~a~l~~rgl~Tl~lR~~~~~~~a~~~a~~L~~ 269 (388)
T PRK08861 212 LITKTKEHAEELAWW--GNCIGATGTPFDSYMTLRGIRTLGARMRVHEESAQQILAYLQT 269 (388)
T ss_pred EEecHHHHHHHHHHH--HhccCCCCChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 6664 5565554321 112234567888887777777663 2 4556667777777654
No 348
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=78.16 E-value=28 Score=31.40 Aligned_cols=40 Identities=15% Similarity=-0.021 Sum_probs=30.6
Q ss_pred cCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh
Q psy6205 181 NTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 181 ~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~ 222 (224)
+-|..+.+.+|.++.-|+.+++ ..++-+++.+++.+.|+.
T Consensus 288 ~n~rmsel~AAig~~qL~~l~~--~~~~R~~~a~~y~~~L~~ 327 (438)
T PRK15407 288 YNLKITDMQAAIGLAQLEKLPG--FIEARKANFAYLKEGLAS 327 (438)
T ss_pred cccCccHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhcc
Confidence 4456788999999999999865 566677777777777754
No 349
>KOG0633|consensus
Probab=77.71 E-value=4.4 Score=34.20 Aligned_cols=52 Identities=21% Similarity=0.276 Sum_probs=34.5
Q ss_pred CCchh---ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHH
Q psy6205 143 IPDIV---TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVME 198 (224)
Q Consensus 143 ~pDi~---~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~ 198 (224)
.|.++ |+||+.| .|+-+|....+.++++.+..- -..|.-+-.+..+|+++|.
T Consensus 216 YpNLivlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~----KaPYNiS~~~s~~AL~Als 271 (375)
T KOG0633|consen 216 YPNLIVLQTLSKSFGLAGIRVGYGAFPLSIAEILNRA----KAPYNISVAGSVAALAALS 271 (375)
T ss_pred CCceeehhhhhhhcCcceeEeecccccHHHHHHHHhc----cCCccccchhHHHHHHhcC
Confidence 36765 6899999 688899999999999887632 1233333344445555443
No 350
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=77.59 E-value=49 Score=30.39 Aligned_cols=26 Identities=23% Similarity=0.423 Sum_probs=20.6
Q ss_pred ccccccc-CCccccccee-cHHHHHhhh
Q psy6205 148 TVGKPMG-NGHPVAAVIT-TKEIAKSFQ 173 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~-~~~i~~~~~ 173 (224)
+|||.+| .|+-+|.+++ .+.+.+.+.
T Consensus 276 S~SK~~glpGlRvG~li~~~~~l~~~~~ 303 (496)
T PLN02376 276 SLSKDMGLPGFRVGIVYSFNDSVVSCAR 303 (496)
T ss_pred eccccCCCCcceEEEEEECCHHHHHHHH
Confidence 7899998 7999999998 566666543
No 351
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=77.07 E-value=21 Score=31.05 Aligned_cols=131 Identities=16% Similarity=0.154 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-------HHhCCccccccchhhhhcCCCCCCchh
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDIV 147 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi~ 147 (224)
.+++++.+. .+..|||+--..|. ...-+++.+.+++. ....+|-+ +.-...| -.-|+.
T Consensus 103 ~~~~~~~i~------~~t~ai~~~h~~G~---~~d~~~i~~~~~~~~i~lIeD~a~a~g~~----~~g~~~G--~~gd~~ 167 (363)
T PF01041_consen 103 PEALEKAIT------PKTKAILVVHLFGN---PADMDAIRAIARKHGIPLIEDAAQAFGAR----YKGRPVG--SFGDIA 167 (363)
T ss_dssp HHHHHHHHH------TTEEEEEEE-GGGB------HHHHHHHHHHTT-EEEEE-TTTTT-E----ETTEETT--SSSSEE
T ss_pred HHHHHHHhc------cCccEEEEecCCCC---cccHHHHHHHHHHcCCcEEEccccccCce----eCCEecc--CCCCce
Confidence 466776665 24477777666653 23223343344443 22223321 1111122 334777
Q ss_pred ccc----ccccCCcccccceec-HHHHHhhh---cCCcc------------cccCCCCcHHHHHHHHHHHHHHhhhhHHH
Q psy6205 148 TVG----KPMGNGHPVAAVITT-KEIAKSFQ---ETGVE------------YFNTYGGNPVSCAVANAVMEVLETENLRE 207 (224)
Q Consensus 148 ~~~----K~l~~G~p~~av~~~-~~i~~~~~---~~~~~------------~~~T~~~~p~~~aaa~a~l~~~~~~~l~~ 207 (224)
++| |.++.|- =|+++++ +++.+.+. ..+.. .+.-|..+++.+|.+++-|+.+++ ..+
T Consensus 168 ~fSf~~~K~i~~ge-GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~~--~~~ 244 (363)
T PF01041_consen 168 IFSFHPTKIITTGE-GGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRLDE--IIA 244 (363)
T ss_dssp EEESSTTSSS-SSS--EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTHHH--HHH
T ss_pred EecCCCCCCCcCCC-CeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHhhh--hHH
Confidence 776 8886321 0336664 55555543 22211 234577889999999999988865 455
Q ss_pred HHHHHHHHHHHhhhhc
Q psy6205 208 HALDVGNQLHTPKKEN 223 (224)
Q Consensus 208 ~~~~~g~~l~~~l~~l 223 (224)
+-+++.+++++.|+.+
T Consensus 245 ~R~~~a~~y~~~L~~~ 260 (363)
T PF01041_consen 245 RRRENAQRYREALAGI 260 (363)
T ss_dssp HHHHHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHhcC
Confidence 5567777777777643
No 352
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=76.88 E-value=3.9 Score=36.00 Aligned_cols=70 Identities=24% Similarity=0.297 Sum_probs=38.8
Q ss_pred CCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecC-CCccccCCCCCCCCCChhHHHHHHHHHHHHH
Q psy6205 4 YPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAP-CPDVYRGKYPADKYPDEDLGVKYAQDVQDLI 82 (224)
Q Consensus 4 ~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp-~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~ 82 (224)
||.++++||.|++.++++..+ .+..+.......+.+..+ .+++.|..++... +++..++.++.|++.+
T Consensus 324 ~~~~~~v~g~g~~~~i~~~~~---------~~~~~~~~l~~~Gv~~~~~~~~~iR~~p~~~~--t~~~i~~~~~~l~~~l 392 (398)
T PRK03244 324 HPLVDHVRGRGLLLGIVLTAP---------VAKAVEAAAREAGFLVNAVAPDVIRLAPPLII--TDAQVDAFVAALPAIL 392 (398)
T ss_pred CCceeeEeeccEEEEEEEecc---------HHHHHHHHHHHCCeEEeecCCCEEEEECCCcC--CHHHHHHHHHHHHHHH
Confidence 677889999999999999531 111222222222333322 2344443322211 2566777778887777
Q ss_pred HH
Q psy6205 83 EA 84 (224)
Q Consensus 83 ~~ 84 (224)
..
T Consensus 393 ~~ 394 (398)
T PRK03244 393 DA 394 (398)
T ss_pred Hh
Confidence 64
No 353
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=76.79 E-value=13 Score=32.87 Aligned_cols=120 Identities=17% Similarity=0.074 Sum_probs=63.7
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchhc--ccccccCC--cccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGNG--HPVA 160 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~G--~p~~ 160 (224)
.++.+|++|......|.+.+-+++.+.+++. |-.-+ -++. ...... .-.|+++ ..|.++|. .-.|
T Consensus 130 ~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~-~~~~---~~~~l~--~g~Di~v~S~tK~l~G~~~~~~G 203 (378)
T TIGR01329 130 PKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTM-MSPL---LCNPLE--LGADIVYHSATKFLAGHSDVMAG 203 (378)
T ss_pred cCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCC-cccc---cCChhh--cCCcEEEEecceeccCCccceeE
Confidence 3678999998777788888777777777766 11111 0111 011111 2368764 68989762 3356
Q ss_pred cceec-HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHH
Q psy6205 161 AVITT-KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLH 217 (224)
Q Consensus 161 av~~~-~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~ 217 (224)
+++++ +++.+.+... ....-...+|..+...+..|+.+.. +.-.+++..+.++|.
T Consensus 204 ~v~~~~~~~~~~~~~~--~~~~G~~~~~~~a~l~~~~l~tl~~R~e~~~~na~~la~~L~ 261 (378)
T TIGR01329 204 VLAVKGEEIAKKVYFL--QNSTGSGLAPFDCWLLLRGIKTLAIRIEKQQENARAIAMFLS 261 (378)
T ss_pred EEEeCcHHHHHHHHHH--HHhcCCcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 66664 4554544321 1112234567777665555555432 233444444444443
No 354
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=76.64 E-value=16 Score=33.06 Aligned_cols=31 Identities=16% Similarity=0.162 Sum_probs=26.2
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH 120 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~ 120 (224)
++..+|++|.+....|.+.+-+++.+.+++.
T Consensus 154 ~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~ 184 (436)
T PRK07812 154 PNTKAFFAETISNPQIDVLDIPGVAEVAHEA 184 (436)
T ss_pred CCCeEEEEECCCCCCCeecCHHHHHHHHHHc
Confidence 3567999999998889999888888888876
No 355
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=76.47 E-value=11 Score=33.33 Aligned_cols=121 Identities=18% Similarity=0.070 Sum_probs=61.5
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchhcc--cccccC-C-cccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIVTV--GKPMGN-G-HPVA 160 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~~~--~K~l~~-G-~p~~ 160 (224)
+++.+|++|-...-.|.+.+-++..+.+++. |-.-+ .++. .....+ .-.|++++ .|.++| | .-.|
T Consensus 133 ~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD~t~-a~~~---~~~p~~--~gaDivv~S~tK~l~g~~d~~gG 206 (380)
T PRK06176 133 PNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTF-ATPY---YQNPLL--LGADIVVHSGTKYLGGHSDVVAG 206 (380)
T ss_pred cCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEECCc-cccc---cCCccc--cCCCEEEecCceeccCCccceee
Confidence 3578899987666677777766666666665 11001 0111 111122 34688764 599976 3 3344
Q ss_pred cceec-HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHH
Q psy6205 161 AVITT-KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHT 218 (224)
Q Consensus 161 av~~~-~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~ 218 (224)
+++++ +++.+.+... +.+. ....+|..+-..+..|+.+. -+...+++.++.++|.+
T Consensus 207 ~vv~~~~~~~~~~~~~-~~~~-G~~~~~~~~~l~~~gl~tl~~R~~~~~~~a~~la~~L~~ 265 (380)
T PRK06176 207 LVTTNNEALAQEIAFF-QNAI-GGVLGPQDSWLLQRGIKTLGLRMEAHQKNALCVAEFLEK 265 (380)
T ss_pred EEEecHHHHHHHHHHH-HHHh-cCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHh
Confidence 45653 5665555321 1111 11224555554444454332 23445666666666654
No 356
>PRK09028 cystathionine beta-lyase; Provisional
Probab=76.34 E-value=6.8 Score=34.91 Aligned_cols=121 Identities=16% Similarity=0.069 Sum_probs=69.3
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH----H-HhCCccccccchhhhhcCCCCCCchhc--ccccccC-C-cccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH----V-QVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN-G-HPVA 160 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----v-~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~-G-~p~~ 160 (224)
.+...|++|....-.|.+.+.++..+.+++. | -.-+ .++. .+.-+. .-.|+++ .-|-|+| | .-.|
T Consensus 145 ~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD~t~-a~p~---~~~Pl~--~GaDivv~S~tK~l~Gh~d~~~G 218 (394)
T PRK09028 145 PNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTW-ASPI---NSRPFE--MGVDISIQAATKYIVGHSDVMLG 218 (394)
T ss_pred cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEECCc-cccc---cCCccc--cCceEEEEeCCeEecCCCCEEEE
Confidence 3567999998776667666666666666665 1 0001 1221 111111 2378775 6899976 3 5566
Q ss_pred cceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHH
Q psy6205 161 AVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHT 218 (224)
Q Consensus 161 av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~ 218 (224)
+++.++++.+.+....... --..+|..|-..+-.|+-|. -+.-.+++..+.++|.+
T Consensus 219 ~~~~~~~~~~~l~~~~~~~--G~~~~p~~a~l~~rgl~TL~lR~~~~~~na~~la~~L~~ 276 (394)
T PRK09028 219 TATANEKHWDQLREHSYLM--GQCTSPDDVYLAMRGLRTLGVRLAQHEKNALKVANWLAT 276 (394)
T ss_pred EEECCHHHHHHHHHHHHhc--CCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhc
Confidence 6666777766554221111 22467777777777776663 24556666666666654
No 357
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=76.15 E-value=3.9 Score=36.70 Aligned_cols=20 Identities=35% Similarity=0.755 Sum_probs=17.0
Q ss_pred CCCc-ceeeccCCceeEEEEe
Q psy6205 3 RYPL-IGDVRGIGLFVGVELV 22 (224)
Q Consensus 3 ~~p~-v~~vRg~Gl~~gielv 22 (224)
+||. +.++||.|+++++++.
T Consensus 341 ~~~~~~~~vrg~Gl~~~i~l~ 361 (425)
T PRK09264 341 KYPGLGAEVRGRGMMQGIDFG 361 (425)
T ss_pred hCCCceecceecccEEEEEec
Confidence 4775 4899999999999995
No 358
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=76.15 E-value=23 Score=31.52 Aligned_cols=134 Identities=13% Similarity=0.100 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
+++|++.+. ++...|-|--+..+-|.+.|-++.-+.+++. ||. +||.-- -.+.+ --|+
T Consensus 131 ~e~L~~al~------~~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa-~Gkipi---~~~~~----~vD~ 196 (386)
T COG1104 131 LEQLEEALR------PDTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQA-VGKIPI---DLEEL----GVDL 196 (386)
T ss_pred HHHHHHhcC------CCceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhh-cCceec---ccccc----Ccce
Confidence 455555442 3566777777888999999999999999998 665 665432 22222 3788
Q ss_pred hccc-ccccCCcccccceecHHHHHh-hhcCC-cccc-cCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhh
Q psy6205 147 VTVG-KPMGNGHPVAAVITTKEIAKS-FQETG-VEYF-NTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPK 220 (224)
Q Consensus 147 ~~~~-K~l~~G~p~~av~~~~~i~~~-~~~~~-~~~~-~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l 220 (224)
++|| -.++|-=.+|++..++.+.=. +..++ -..+ -+=+-|..+.++.-+++++..+ +...+++.++-++|.++|
T Consensus 197 ls~SaHK~~GpkGiGaLyv~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l 276 (386)
T COG1104 197 LSFSAHKFGGPKGIGALYVRPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGL 276 (386)
T ss_pred EEeehhhccCCCceEEEEECCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8875 344442466788877655421 11111 0111 0112355566666666776643 467788888899999888
Q ss_pred hh
Q psy6205 221 KE 222 (224)
Q Consensus 221 ~~ 222 (224)
++
T Consensus 277 ~~ 278 (386)
T COG1104 277 LE 278 (386)
T ss_pred Hh
Confidence 75
No 359
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=75.85 E-value=5 Score=36.03 Aligned_cols=22 Identities=14% Similarity=0.082 Sum_probs=17.3
Q ss_pred CCCcceee-ccCCceeEEEEeecC
Q psy6205 3 RYPLIGDV-RGIGLFVGVELVTCR 25 (224)
Q Consensus 3 ~~p~v~~v-Rg~Gl~~gielv~~~ 25 (224)
+||.+.++ |+.| +.|+|++.++
T Consensus 344 ~~~~~~~v~r~~g-~~gi~~~~~~ 366 (428)
T PRK12389 344 KHGITITINRLKG-ALTVYFTDEK 366 (428)
T ss_pred hCCCCEEEEecCc-EEEEEEeCCC
Confidence 48888888 8888 7789998653
No 360
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=75.26 E-value=6.2 Score=35.86 Aligned_cols=50 Identities=16% Similarity=0.199 Sum_probs=36.1
Q ss_pred hcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHH
Q psy6205 147 VTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVME 198 (224)
Q Consensus 147 ~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~ 198 (224)
-+|||.|.=|+=+|.+++.+++.+.+... ....+.+.+++.-++...-|.
T Consensus 295 gSFSK~l~PglRlG~vv~p~~~~~~~~~~--k~~~~~~~s~~~Q~~la~~l~ 344 (459)
T COG1167 295 GSFSKTLAPGLRLGYVVAPPELIEKLLRL--KQAADLGPSSLSQAALAAFLL 344 (459)
T ss_pred eeehhhcccccceeeeeCCHHHHHHHHHH--HHHhcCCCChHHHHHHHHHHH
Confidence 38999999999999999999999988653 334555666666444444333
No 361
>PTZ00377 alanine aminotransferase; Provisional
Probab=75.21 E-value=11 Score=34.32 Aligned_cols=73 Identities=10% Similarity=0.027 Sum_probs=46.0
Q ss_pred cccccc-c-CCccccccee---cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHH-----------Hh-hhhHHHHHH
Q psy6205 148 TVGKPM-G-NGHPVAAVIT---TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEV-----------LE-TENLREHAL 210 (224)
Q Consensus 148 ~~~K~l-~-~G~p~~av~~---~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~-----------~~-~~~l~~~~~ 210 (224)
+|||.+ + .|+=+|.+++ ++++.+.+... . ..+++.|+++..++.+.|+- ++ ...+.++.+
T Consensus 296 S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~--~-~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (481)
T PTZ00377 296 STSKGIIGECGRRGGYFELTNIPPEVREQIYKL--A-SINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLK 372 (481)
T ss_pred cCCcccccCCcCceEEEEEeCCCHHHHHHHHHH--h-heecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHH
Confidence 489997 4 5888898886 89998888643 1 12345677888888777742 11 122333445
Q ss_pred HHHHHHHHhhhhc
Q psy6205 211 DVGNQLHTPKKEN 223 (224)
Q Consensus 211 ~~g~~l~~~l~~l 223 (224)
+.-+.+.+.|+++
T Consensus 373 ~rr~~l~~~L~~~ 385 (481)
T PTZ00377 373 RRAELLTDELNKI 385 (481)
T ss_pred HHHHHHHHHHhcC
Confidence 5556666666543
No 362
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=74.85 E-value=7.2 Score=34.55 Aligned_cols=49 Identities=18% Similarity=0.202 Sum_probs=34.0
Q ss_pred cccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHH
Q psy6205 148 TVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVME 198 (224)
Q Consensus 148 ~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~ 198 (224)
++||....|+-+|.+++++++++.+... ......+.++++..++.+.|+
T Consensus 246 SfSK~~~pGlRiG~~i~~~~l~~~~~~~--~~~~~~~~s~~~q~~~~~~l~ 294 (416)
T PRK09440 246 SLSKLGLPGVRCGIVIADEEIIEALSNM--NGIISLAPGRLGPAIAAEMIE 294 (416)
T ss_pred cccccCCCcceEEEEeCCHHHHHHHHHH--HHHhccCCCcHHHHHHHHHhc
Confidence 7899744689999999999999887643 111234456666666666664
No 363
>PTZ00376 aspartate aminotransferase; Provisional
Probab=73.86 E-value=8.3 Score=34.14 Aligned_cols=76 Identities=16% Similarity=0.162 Sum_probs=43.5
Q ss_pred ccccccc-CCcccccc---eecHHHHHhhhcCC-cccccCCCC-cHHHHHHHHHHHHHH-------h-hhhHHHHHHHHH
Q psy6205 148 TVGKPMG-NGHPVAAV---ITTKEIAKSFQETG-VEYFNTYGG-NPVSCAVANAVMEVL-------E-TENLREHALDVG 213 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av---~~~~~i~~~~~~~~-~~~~~T~~~-~p~~~aaa~a~l~~~-------~-~~~l~~~~~~~g 213 (224)
+|||.++ .|+-+|.+ ++++++.+.+...- ....+++.. ++++..++.+.|+-- + -.+..+++++.-
T Consensus 248 SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r 327 (404)
T PTZ00376 248 SFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMR 327 (404)
T ss_pred eCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999 79999998 57877655443210 012234433 556666666666321 0 012334556666
Q ss_pred HHHHHhhhhc
Q psy6205 214 NQLHTPKKEN 223 (224)
Q Consensus 214 ~~l~~~l~~l 223 (224)
+.+.+.|+++
T Consensus 328 ~~l~~~L~~~ 337 (404)
T PTZ00376 328 QLLYDELKAL 337 (404)
T ss_pred HHHHHHHHhc
Confidence 6676666653
No 364
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=73.37 E-value=13 Score=32.80 Aligned_cols=23 Identities=22% Similarity=0.371 Sum_probs=20.0
Q ss_pred hccccccc-CCcccccceecHHHH
Q psy6205 147 VTVGKPMG-NGHPVAAVITTKEIA 169 (224)
Q Consensus 147 ~~~~K~l~-~G~p~~av~~~~~i~ 169 (224)
-+|||.+| .|+-+|.+++++++.
T Consensus 242 ~SfSK~~g~pGlRiG~~i~~~~l~ 265 (402)
T TIGR03542 242 RSFSKTAGFTGVRLGWTVVPKELT 265 (402)
T ss_pred ecCccccCCCCcceEEEEecHHHh
Confidence 37899997 689999999998876
No 365
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=73.15 E-value=16 Score=31.82 Aligned_cols=71 Identities=14% Similarity=0.186 Sum_probs=45.0
Q ss_pred ccccCCcc-cccceecHHHHHhhhcCCccc---------ccCC-CCcHHHHHHHHHHHHHHhhh----hHHHHHHHHHHH
Q psy6205 151 KPMGNGHP-VAAVITTKEIAKSFQETGVEY---------FNTY-GGNPVSCAVANAVMEVLETE----NLREHALDVGNQ 215 (224)
Q Consensus 151 K~l~~G~p-~~av~~~~~i~~~~~~~~~~~---------~~T~-~~~p~~~aaa~a~l~~~~~~----~l~~~~~~~g~~ 215 (224)
|.+| -| +|.+++++++.+.+.+..... ..++ +-|-....+..++|++++++ ++.++.+++.++
T Consensus 193 K~lG--P~G~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~ 270 (355)
T cd00611 193 KNLG--PAGVTVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQL 270 (355)
T ss_pred cccC--CCceEEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 6552 33 677888998887654321000 0123 22334667777888888654 466777899999
Q ss_pred HHHhhhhc
Q psy6205 216 LHTPKKEN 223 (224)
Q Consensus 216 l~~~l~~l 223 (224)
|+++|+++
T Consensus 271 l~~~l~~~ 278 (355)
T cd00611 271 LYDTIDNS 278 (355)
T ss_pred HHHHHHhC
Confidence 99998876
No 366
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=73.12 E-value=4.1 Score=36.27 Aligned_cols=22 Identities=9% Similarity=0.066 Sum_probs=19.0
Q ss_pred CCCcceeeccCCceeEEEEeec
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTC 24 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~ 24 (224)
+|+.+.++||.|+|.++++..+
T Consensus 339 ~~~~~~~v~~~g~~~~v~~~~~ 360 (423)
T TIGR00713 339 DTGIPHTVNRVGSMFSLFFTEE 360 (423)
T ss_pred hcCCCeEEEeeccEEEEEEecC
Confidence 4788889999999999999753
No 367
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=72.71 E-value=68 Score=28.38 Aligned_cols=72 Identities=11% Similarity=0.028 Sum_probs=43.9
Q ss_pred ccccccc-CCccccccee------cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHH-Hh--hhhHHHHHHHHHHHHH
Q psy6205 148 TVGKPMG-NGHPVAAVIT------TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEV-LE--TENLREHALDVGNQLH 217 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~------~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~-~~--~~~l~~~~~~~g~~l~ 217 (224)
+|||.++ .|+=+|.+++ .+++.+.+... ...+++.++++.+++.+.|+- .+ -++..+++++.-+.+.
T Consensus 246 SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~---~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~ 322 (412)
T PTZ00433 246 GTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRL---GMLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLY 322 (412)
T ss_pred cchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHH---hhccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH
Confidence 6899996 6899999987 34566665432 112456677877777776653 11 1234445555566666
Q ss_pred Hhhhh
Q psy6205 218 TPKKE 222 (224)
Q Consensus 218 ~~l~~ 222 (224)
+.|++
T Consensus 323 ~~L~~ 327 (412)
T PTZ00433 323 NHIGE 327 (412)
T ss_pred HHHhc
Confidence 66654
No 368
>PRK05839 hypothetical protein; Provisional
Probab=72.48 E-value=11 Score=33.02 Aligned_cols=48 Identities=10% Similarity=0.069 Sum_probs=31.6
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHH
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVM 197 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l 197 (224)
+|||.++ .|+-+|.+++++++.+.+... ....++..+.++..++.+.+
T Consensus 229 SfSK~~~~~GlRiG~ii~~~~~~~~~~~~--~~~~~~~~~~~~q~~~~~~l 277 (374)
T PRK05839 229 SISKRSSAPGLRSGFIAGDASILKKYKAY--RTYLGCASPLPLQKAAAVAW 277 (374)
T ss_pred ccccccCCccceeEEEecCHHHHHHHHHH--HhhcCCCCChHHHHHHHHHh
Confidence 6899976 589999999999999887542 11123344555555554444
No 369
>PLN02452 phosphoserine transaminase
Probab=71.84 E-value=15 Score=32.45 Aligned_cols=77 Identities=16% Similarity=0.128 Sum_probs=52.4
Q ss_pred chhcccccccCCcc-cccceecHHHHHhhhcCCcc---------cccCC-CCcHHHHHHHHHHHHHHhhh----hHHHHH
Q psy6205 145 DIVTVGKPMGNGHP-VAAVITTKEIAKSFQETGVE---------YFNTY-GGNPVSCAVANAVMEVLETE----NLREHA 209 (224)
Q Consensus 145 Di~~~~K~l~~G~p-~~av~~~~~i~~~~~~~~~~---------~~~T~-~~~p~~~aaa~a~l~~~~~~----~l~~~~ 209 (224)
|+..-=|.+| -| ++.+++++++.+........ ..++| +-|-.++.+..++|+.|+++ ...++-
T Consensus 194 ~~~saqK~lG--P~Gl~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~ 271 (365)
T PLN02452 194 IYAGAQKNVG--PSGVTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRN 271 (365)
T ss_pred EEEecccccC--CCCeEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHH
Confidence 5556668884 33 68899999998765432111 11344 34445777888999999764 567778
Q ss_pred HHHHHHHHHhhhhc
Q psy6205 210 LDVGNQLHTPKKEN 223 (224)
Q Consensus 210 ~~~g~~l~~~l~~l 223 (224)
+++.++|.+.|++.
T Consensus 272 ~~~a~~l~~~l~~~ 285 (365)
T PLN02452 272 IRKADLLYDAIDES 285 (365)
T ss_pred HHHHHHHHHHHHhC
Confidence 89999999999763
No 370
>KOG2862|consensus
Probab=71.69 E-value=31 Score=30.02 Aligned_cols=138 Identities=16% Similarity=0.260 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHH-HHHHH-------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLR-EVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~-~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
++++.+.+. + +++-+|.+-=.-++.|+..+..+-.. .+++. ..+-+| |. -|.++.|| |.--.
T Consensus 131 le~i~~~ls---q--h~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlg--gt-~F~mDewg--VDvay 200 (385)
T KOG2862|consen 131 LEEITEKLS---Q--HKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLG--GT-EFEMDEWG--VDVAY 200 (385)
T ss_pred HHHHHHHHH---h--cCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcC--Cc-cceehhhc--ccEEE
Confidence 455554444 2 45666666555556787777444333 33433 222243 22 36788888 43222
Q ss_pred hcccccccC--CcccccceecHHHHHhhhcCC---cccc------cCCCC-----------cHHH-HHHHHHHHHHHhhh
Q psy6205 147 VTVGKPMGN--GHPVAAVITTKEIAKSFQETG---VEYF------NTYGG-----------NPVS-CAVANAVMEVLETE 203 (224)
Q Consensus 147 ~~~~K~l~~--G~p~~av~~~~~i~~~~~~~~---~~~~------~T~~~-----------~p~~-~aaa~a~l~~~~~~ 203 (224)
.--=|+|+. |+ +-+..++..++.+++.- .+++ .+|.| .|+. .-.-.++|+.|-++
T Consensus 201 tgSQKaL~aP~GL--siisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~ee 278 (385)
T KOG2862|consen 201 TGSQKALGAPAGL--SIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEE 278 (385)
T ss_pred ecchhhcCCCCCc--ceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHH
Confidence 334588885 64 33777888888876531 1111 12222 2332 33445778888665
Q ss_pred ---hHHHHHHHHHHHHHHhhhhcC
Q psy6205 204 ---NLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 204 ---~l~~~~~~~g~~l~~~l~~l~ 224 (224)
+..++=++++++|+..|+++|
T Consensus 279 GL~~~~~rH~e~s~~l~~~l~~~G 302 (385)
T KOG2862|consen 279 GLENSWRRHREMSKWLKLSLEALG 302 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 455666799999999999875
No 371
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=71.57 E-value=64 Score=28.58 Aligned_cols=72 Identities=13% Similarity=0.031 Sum_probs=36.2
Q ss_pred ccccccc-CCcccccceec--HHH------HHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHH
Q psy6205 148 TVGKPMG-NGHPVAAVITT--KEI------AKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQ 215 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~--~~i------~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~ 215 (224)
+|||..+ .|+-+|.+++. +.+ .+.+... ....++ .+.++.+++.+.|+--.+ +...+++++.-++
T Consensus 239 SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~--~~~~~~-~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 315 (409)
T PLN00143 239 SISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKA--LNPAPF-PPTFIQAAIPEILEKTTEDFFSKTINILRAALAF 315 (409)
T ss_pred cchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHHH--HhccCC-CCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 6899954 68999999983 333 2222211 111233 355666666666642101 1233344444444
Q ss_pred HHHhhhh
Q psy6205 216 LHTPKKE 222 (224)
Q Consensus 216 l~~~l~~ 222 (224)
+.+.|++
T Consensus 316 ~~~~L~~ 322 (409)
T PLN00143 316 CYDKLKE 322 (409)
T ss_pred HHHHHhc
Confidence 5555544
No 372
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=70.85 E-value=19 Score=32.06 Aligned_cols=120 Identities=18% Similarity=0.085 Sum_probs=58.8
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------HHhCCccccccchhhhhcCCCCCCchhc--ccccccC-C-cccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN-G-HPVA 160 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~-G-~p~~ 160 (224)
++.+|++|+...-...++.-+.+.+..++. |-.-| +. .+.++-+. .-.||++ +.|-++| | .-.|
T Consensus 140 ~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVDnT~---at-p~~~~pL~--~GaDivv~S~TKyl~Ghsdv~~G 213 (386)
T PF01053_consen 140 NTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVDNTF---AT-PYNQNPLE--LGADIVVHSATKYLSGHSDVMGG 213 (386)
T ss_dssp TEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEECTT---TH-TTTC-GGG--GT-SEEEEETTTTTTTSSSE-EE
T ss_pred cceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEeeccc---cc-eeeeccCc--CCceEEEeeccccccCCcceeeE
Confidence 889999998765443344434444444332 10001 11 11222222 2278875 7899986 4 5567
Q ss_pred cceec--HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHH
Q psy6205 161 AVITT--KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHT 218 (224)
Q Consensus 161 av~~~--~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~ 218 (224)
+++++ +++++.+......++. ..+|..|-..+..|+-+. -+...+++.++.++|.+
T Consensus 214 ~vv~~~~~~~~~~l~~~~~~~G~--~~~p~da~ll~rgl~Tl~~R~~~~~~nA~~lA~~L~~ 273 (386)
T PF01053_consen 214 AVVVNGSSELYDRLREFRRLLGA--TLSPFDAWLLLRGLRTLPLRMERQNENAEALAEFLEE 273 (386)
T ss_dssp EEEESSHHHHHHHHHHHHHHHT---B--HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEECchhhhhhhhcchhhhcCc--cchHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHh
Confidence 77755 4777766432112222 235666666666666653 23455555566655544
No 373
>PRK06434 cystathionine gamma-lyase; Validated
Probab=70.01 E-value=17 Score=32.20 Aligned_cols=122 Identities=16% Similarity=0.076 Sum_probs=63.9
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH---HHhCCccccccchhhhhcCCCCCCchhccc--ccccC-C-cccccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH---VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG--KPMGN-G-HPVAAV 162 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~---v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~--K~l~~-G-~p~~av 162 (224)
+++.+|++|-+-...+.+.+-+...+.+++. |-.-|+ ++ +.....+ .-.|++++| |-|+| | .--|++
T Consensus 147 ~~tklv~~e~~snpt~~v~Di~~I~~la~~~~lvVD~t~~-s~---~~~~pl~--~gaDivv~S~tK~i~G~~d~~gG~v 220 (384)
T PRK06434 147 SNYDLIYAESITNPTLKVPDIKNVSSFCHENDVIVDATFA-SP---YNQNPLD--LGADVVIHSATKYISGHSDVVMGVA 220 (384)
T ss_pred CCeeEEEEEcCCCCCceeecHHHHHHHHHHcCeEEECCCC-Cc---ccCCchh--cCCCEEEeecccccCCCCCceEEEE
Confidence 4567777887654445555555555555554 211121 11 1122233 447988765 77865 3 334555
Q ss_pred ee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 163 IT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 163 ~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
++ ++++.+.+... ....-...+|..++.++.-|+.+.. .+++-.++.+.+.+.|+
T Consensus 221 v~~~~~~~~~~~~~--~~~~G~~~~~~~A~l~~~gL~tL~~--R~~r~~~~a~~~a~~L~ 276 (384)
T PRK06434 221 GTNNKSIFNNLVER--RKTLGSNPDPIQAYLALRGLKTLGL--RMEKHNKNGMELARFLR 276 (384)
T ss_pred ecCcHHHHHHHHHH--HHhcCCCCCHHHHHHHHhCCCcHHH--HHHHHHHHHHHHHHHHH
Confidence 55 45565554321 1112334578888888888877743 34444444555544444
No 374
>PRK06855 aminotransferase; Validated
Probab=69.81 E-value=51 Score=29.49 Aligned_cols=47 Identities=9% Similarity=0.086 Sum_probs=28.2
Q ss_pred ccccccc-CCccccccee-----cH---HHHHhhhcCCcccccCCCCcHHHHHHHHHHH
Q psy6205 148 TVGKPMG-NGHPVAAVIT-----TK---EIAKSFQETGVEYFNTYGGNPVSCAVANAVM 197 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~-----~~---~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l 197 (224)
.|||.++ .|+=+|.+++ ++ ++++.+... ...+.+.+.++..++.+.|
T Consensus 240 S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Q~a~~~~l 295 (433)
T PRK06855 240 GISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNA---KMIEVCSTTLPQMAIPRIM 295 (433)
T ss_pred cCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHh---hccccCCChHHHHHHHHhh
Confidence 6899997 7899999997 22 233333221 1123345666666666555
No 375
>PRK08363 alanine aminotransferase; Validated
Probab=69.61 E-value=8.9 Score=33.77 Aligned_cols=76 Identities=11% Similarity=-0.100 Sum_probs=45.1
Q ss_pred ccccccc-CCccccccee--cHHHHHhhhcCCc-ccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhh
Q psy6205 148 TVGKPMG-NGHPVAAVIT--TKEIAKSFQETGV-EYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~--~~~i~~~~~~~~~-~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~ 221 (224)
+|||..+ .|+-+|.+++ ++++.+.+..... ....+++.++++-.++.+.|+...+ +++.+++++.-+++.+.|+
T Consensus 234 SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~ 313 (398)
T PRK08363 234 GLSKVYFATGWRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLN 313 (398)
T ss_pred cchhccCCccceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHh
Confidence 7899954 6888899987 6665555432200 1112456677777777766643111 2345556666677777776
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 314 ~~ 315 (398)
T PRK08363 314 EI 315 (398)
T ss_pred cC
Confidence 53
No 376
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=69.33 E-value=4.4 Score=37.00 Aligned_cols=64 Identities=23% Similarity=0.498 Sum_probs=49.9
Q ss_pred CCceEEEEcc-ccCCCCcccCCHHHHHHHHHH---------------HHhCCccccccchhhhhcCCCCCCchhcccccc
Q psy6205 90 KRPCAFFAES-LQSCGGQIIPPANYLREVYKH---------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPM 153 (224)
Q Consensus 90 ~~iaavi~Ep-v~~~~G~~~~~~~~l~~~~~~---------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l 153 (224)
+..-.+|.|| ++| |....-.++|=+.+.+. |.+|+ ..|+ |+.-++|..+.|.-|++||.|
T Consensus 314 g~PfLL~~DpRleG-GaFYlGs~eyE~~I~~~I~~~L~~LgF~~~qLILSGl-SMGT--fgAlYYga~l~P~AIiVgKPL 389 (511)
T TIGR03712 314 GAPFLLIGDPRLEG-GAFYLGSDEYEQGIINVIQEKLDYLGFDHDQLILSGL-SMGT--FGALYYGAKLSPHAIIVGKPL 389 (511)
T ss_pred CCCeEEeecccccc-ceeeeCcHHHHHHHHHHHHHHHHHhCCCHHHeeeccc-cccc--hhhhhhcccCCCceEEEcCcc
Confidence 4567888999 554 45677788887777776 88998 6786 566677778999999999999
Q ss_pred cC-Cc
Q psy6205 154 GN-GH 157 (224)
Q Consensus 154 ~~-G~ 157 (224)
.| |.
T Consensus 390 ~NLGt 394 (511)
T TIGR03712 390 VNLGT 394 (511)
T ss_pred cchhh
Confidence 98 73
No 377
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=69.07 E-value=21 Score=32.18 Aligned_cols=68 Identities=24% Similarity=0.295 Sum_probs=39.4
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchhc--ccccccC-Ccccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN-GHPVAAV 162 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~-G~p~~av 162 (224)
++.+|++|......|.+.+.++..+.+++. |-.-++ ++. .+.... .-.|+++ +.|.++| |..+|++
T Consensus 149 ~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD~t~a-~~~---~~~pl~--~gaDivv~S~tK~lgg~g~~~Gg~ 222 (431)
T PRK08248 149 KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVDNTFA-SPY---LLRPIE--HGADIVVHSATKFIGGHGTSIGGV 222 (431)
T ss_pred CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEeCCCC-ccc---cCChhH--cCCCEEEEcCccccCCCCCceEEE
Confidence 577888986655678888777666666665 111121 121 111111 2368775 6799987 5666666
Q ss_pred ee
Q psy6205 163 IT 164 (224)
Q Consensus 163 ~~ 164 (224)
+.
T Consensus 223 v~ 224 (431)
T PRK08248 223 IV 224 (431)
T ss_pred EE
Confidence 65
No 378
>PRK07671 cystathionine beta-lyase; Provisional
Probab=69.04 E-value=25 Score=30.96 Aligned_cols=120 Identities=15% Similarity=0.106 Sum_probs=62.2
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchh--cccccccC-C-ccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN-G-HPVAA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~-G-~p~~a 161 (224)
++.+|++|-.....|.+.+-++..+.+++. |-.-+ .++. + ..... .-.|++ .++|.++| + .--|+
T Consensus 134 ~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD~a~-~~~~-~--~~p~~--~g~Divv~S~sK~l~G~~~~~~G~ 207 (377)
T PRK07671 134 NTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVDNTF-MTPY-W--QSPIS--LGADIVLHSATKYLGGHSDVVAGL 207 (377)
T ss_pred CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCC-Cccc-c--CChhh--hCCeEEEecCcccccCCccceeEE
Confidence 567888886555566666655566655555 11112 1121 1 11111 335776 47899975 2 22333
Q ss_pred cee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHH
Q psy6205 162 VIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHT 218 (224)
Q Consensus 162 v~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~ 218 (224)
+++ ++++.+.+... .....-..+|..+..++..++.+.. +...++++.+.++|.+
T Consensus 208 ~v~~~~~l~~~~~~~--~~~~g~~~~~~~a~l~~~~l~tl~~R~~~~~~na~~la~~L~~ 265 (377)
T PRK07671 208 VVVNSPELAEDLHFV--QNSTGGILGPQDSWLLLRGLKTLGIRMEEHETNSRAIAEFLNN 265 (377)
T ss_pred EEeCcHHHHHHHHHH--HHhhcCCCCHHHHHHHHcCcChHHHHHHHHHHHHHHHHHHHHc
Confidence 444 56676665422 1111234467777777766666632 3444555555555543
No 379
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=68.16 E-value=9.6 Score=34.27 Aligned_cols=75 Identities=13% Similarity=0.047 Sum_probs=41.1
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLI 82 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~ 82 (224)
++|.++++||.|++.+++++....++.+.......+.......+.+ +| | +.... .+ +++..++.++.+++.+
T Consensus 332 ~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~-~p-~--l~is~--~h--t~~dId~~l~~l~~~l 403 (431)
T PRK06209 332 EHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGVL-MP-S--LVVSY--AH--GDADIERTIDAVHGAL 403 (431)
T ss_pred hCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHHCCcc-cc-c--ccccc--cC--CHHHHHHHHHHHHHHH
Confidence 4788889999999999999865433333322221222222222332 22 2 11111 11 2566677777777777
Q ss_pred HHH
Q psy6205 83 EAM 85 (224)
Q Consensus 83 ~~~ 85 (224)
..+
T Consensus 404 ~~~ 406 (431)
T PRK06209 404 GVY 406 (431)
T ss_pred HHH
Confidence 654
No 380
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=67.91 E-value=85 Score=27.55 Aligned_cols=73 Identities=7% Similarity=-0.036 Sum_probs=42.0
Q ss_pred ccccccc-CCcccccceecH------HHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHH
Q psy6205 148 TVGKPMG-NGHPVAAVITTK------EIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQLH 217 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~------~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~ 217 (224)
+|||..+ .|+=+|.+++.+ ++.+.+... ...+++.++++..++.+.|+...+ +...+++++.-+++.
T Consensus 237 SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~ 313 (401)
T TIGR01264 237 GLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKL---SQRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCY 313 (401)
T ss_pred cCcccCCCccceEEEEEecCcchhHHHHHHHHHHH---hhccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 6899855 588889999863 344433321 112345567777777777753111 223444555556666
Q ss_pred Hhhhhc
Q psy6205 218 TPKKEN 223 (224)
Q Consensus 218 ~~l~~l 223 (224)
+.|+++
T Consensus 314 ~~L~~~ 319 (401)
T TIGR01264 314 GALAAV 319 (401)
T ss_pred HHHHhC
Confidence 666653
No 381
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=67.02 E-value=8.3 Score=33.85 Aligned_cols=20 Identities=50% Similarity=1.059 Sum_probs=17.0
Q ss_pred CCC-cceeeccCCceeEEEEe
Q psy6205 3 RYP-LIGDVRGIGLFVGVELV 22 (224)
Q Consensus 3 ~~p-~v~~vRg~Gl~~gielv 22 (224)
.+| .+.++||.|++.++++.
T Consensus 317 ~~~~~~~~v~g~G~~~~i~~~ 337 (389)
T PRK01278 317 RFPDVIEEVRGKGLLLGLKCV 337 (389)
T ss_pred hCCCceeeEecccEEEEEEEe
Confidence 366 67899999999999985
No 382
>KOG3370|consensus
Probab=65.35 E-value=6.4 Score=29.56 Aligned_cols=37 Identities=22% Similarity=0.422 Sum_probs=27.3
Q ss_pred cCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--HHhCCcccc
Q psy6205 87 RNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--VQVGFGRVG 129 (224)
Q Consensus 87 ~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--v~tG~GrtG 129 (224)
+++++||-+|+|+|.. |.-..++.|.+- .+-|||.||
T Consensus 101 k~Gdriaqli~~~i~~------~~i~~v~sLe~t~Rg~~Gfgstg 139 (140)
T KOG3370|consen 101 KKGDRIAQLIVEKIVT------PEIVLVSSLEATERGAGGFGSTG 139 (140)
T ss_pred ecCCcceeeEEEecCC------CceehhhhHHHHhhhccCcCCCC
Confidence 3689999999999752 344455555555 889999998
No 383
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=64.71 E-value=12 Score=33.79 Aligned_cols=75 Identities=15% Similarity=0.142 Sum_probs=38.4
Q ss_pred CCcceeeccCCceeEEEEeecCCCCC-Cc----cccchhhhccCCCcceeecCCCccccCC-CCCCCCCChhHHHHHHHH
Q psy6205 4 YPLIGDVRGIGLFVGVELVTCRKQKT-PA----TSEAQHVITRPPVRMSTEAPCPDVYRGK-YPADKYPDEDLGVKYAQD 77 (224)
Q Consensus 4 ~p~v~~vRg~Gl~~gielv~~~~t~~-p~----~~~a~~l~~~~~~~~~~~vp~P~~yr~~-~~~~~~~~~~~~~~~~~~ 77 (224)
+| +.++| .|+|+++||+.++.+.. +. ......+.......+.+..+.. |... ....+ +++..++.++.
T Consensus 348 ~~-v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~~~ls~~h--t~~did~~~~a 421 (433)
T PRK00615 348 FP-VSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSP--FEASFLSSAH--SMENLDYAQNV 421 (433)
T ss_pred CC-eEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCcc--ccccceecCC--CHHHHHHHHHH
Confidence 56 88999 99999999986543211 11 1112223333333344333221 1111 11111 35667777777
Q ss_pred HHHHHHH
Q psy6205 78 VQDLIEA 84 (224)
Q Consensus 78 l~~~~~~ 84 (224)
+++.++.
T Consensus 422 ~~~~~~~ 428 (433)
T PRK00615 422 LIDSLEK 428 (433)
T ss_pred HHHHHHH
Confidence 7777764
No 384
>PRK07046 aminotransferase; Validated
Probab=64.53 E-value=10 Score=34.39 Aligned_cols=22 Identities=23% Similarity=0.188 Sum_probs=18.6
Q ss_pred CCCcceeeccCCceeEEEEeec
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTC 24 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~ 24 (224)
+|+.+.+|||.|++.++++..+
T Consensus 367 ~~~~~~~v~g~G~~~~i~~~~~ 388 (453)
T PRK07046 367 RHGLPWHVTRVGARVEFQFAPT 388 (453)
T ss_pred hCCCCeEEEEeCcEEEEEEeCC
Confidence 5788889999999999998643
No 385
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=64.52 E-value=41 Score=29.34 Aligned_cols=72 Identities=14% Similarity=0.158 Sum_probs=46.3
Q ss_pred cccccCCcc-cccceecHHHHHhhhcCCcc---------cccCC-CCcHHHHHHHHHHHHHHhhh----hHHHHHHHHHH
Q psy6205 150 GKPMGNGHP-VAAVITTKEIAKSFQETGVE---------YFNTY-GGNPVSCAVANAVMEVLETE----NLREHALDVGN 214 (224)
Q Consensus 150 ~K~l~~G~p-~~av~~~~~i~~~~~~~~~~---------~~~T~-~~~p~~~aaa~a~l~~~~~~----~l~~~~~~~g~ 214 (224)
-|.+| -| +|.+..+++..+.+.+.... ...++ +-|-....+..++|+++.++ ++.++.+++.+
T Consensus 184 qK~lg--P~Glg~l~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~ 261 (349)
T TIGR01364 184 QKNIG--PAGLTVVIVRKDLLGRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQ 261 (349)
T ss_pred ccccC--CCceEEEEECHHHHhhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 37663 33 67788888888765432100 01233 33344666667889988654 46677788999
Q ss_pred HHHHhhhhc
Q psy6205 215 QLHTPKKEN 223 (224)
Q Consensus 215 ~l~~~l~~l 223 (224)
++++.|+++
T Consensus 262 ~l~~~l~~~ 270 (349)
T TIGR01364 262 LLYDTIDNS 270 (349)
T ss_pred HHHHHHHhC
Confidence 999999877
No 386
>PRK08064 cystathionine beta-lyase; Provisional
Probab=64.35 E-value=29 Score=30.70 Aligned_cols=119 Identities=13% Similarity=0.025 Sum_probs=61.5
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchhc--ccccccC--Cccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN--GHPVAA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~--G~p~~a 161 (224)
+..+|++|..-...|.+.+-++..+.+++. |-.-++ ++. ...... .-.|+++ +.|.++| |.-.|+
T Consensus 138 ~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD~a~~-~~~---~~~~~~--~g~Divv~S~tK~~~G~~~~laG~ 211 (390)
T PRK08064 138 NTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVDNTFL-TPL---LQKPLD--LGADVVLHSATKFLAGHSDVLAGL 211 (390)
T ss_pred CceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEECCCC-ccc---ccCchh--hCCcEEEeecceeccCCccceeEE
Confidence 567888987666677777766666666665 111111 110 011111 2357764 6798864 222343
Q ss_pred cee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHH
Q psy6205 162 VIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLH 217 (224)
Q Consensus 162 v~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~ 217 (224)
+++ ++++.+.+... ........+|..+..++..++.+. -+...+++.++.++|.
T Consensus 212 ~v~~~~~~~~~l~~~--~~~~g~~~~~~~a~l~~~gl~tl~~R~~~~~~~a~~la~~L~ 268 (390)
T PRK08064 212 AVVKDEELAQKLYFL--QNSFGAVLGVQDCWLVLRGLKTLHVRLEHSSETANKIALYLQ 268 (390)
T ss_pred EEeCCHHHHHHHHHH--HHhcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHh
Confidence 555 46777766532 112233455666666555555442 1344555555555554
No 387
>PLN02397 aspartate transaminase
Probab=63.99 E-value=22 Score=31.84 Aligned_cols=76 Identities=12% Similarity=0.186 Sum_probs=41.1
Q ss_pred ccccccc-CCcccccce--e-cHHHHHhhhcCC-cccccCCC-CcHHHHHHHHHHHHHH-------h-hhhHHHHHHHHH
Q psy6205 148 TVGKPMG-NGHPVAAVI--T-TKEIAKSFQETG-VEYFNTYG-GNPVSCAVANAVMEVL-------E-TENLREHALDVG 213 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~--~-~~~i~~~~~~~~-~~~~~T~~-~~p~~~aaa~a~l~~~-------~-~~~l~~~~~~~g 213 (224)
+|||.++ -|+-+|.++ + .+++++.+...- ....+++. .+.++.+++.+.|+-= + -++..++.++.-
T Consensus 266 SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr 345 (423)
T PLN02397 266 SYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADRIISMR 345 (423)
T ss_pred ECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999 688889874 3 566554332110 01112332 3445555555555320 0 123455666777
Q ss_pred HHHHHhhhhc
Q psy6205 214 NQLHTPKKEN 223 (224)
Q Consensus 214 ~~l~~~l~~l 223 (224)
+.+.+.|+++
T Consensus 346 ~~l~~~L~~~ 355 (423)
T PLN02397 346 QKLYDALEAR 355 (423)
T ss_pred HHHHHHHHhc
Confidence 7777777664
No 388
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=63.34 E-value=40 Score=29.45 Aligned_cols=44 Identities=14% Similarity=0.167 Sum_probs=29.8
Q ss_pred cCCCCcHHH-HHHHHHHHHHHhhh----hHHHHHHHHHHHHHHhhhhcC
Q psy6205 181 NTYGGNPVS-CAVANAVMEVLETE----NLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 181 ~T~~~~p~~-~aaa~a~l~~~~~~----~l~~~~~~~g~~l~~~l~~l~ 224 (224)
.|++-.++. +.+..++|++++++ ...++.+++.+++++.|++++
T Consensus 233 ~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~ 281 (361)
T TIGR01366 233 QTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERP 281 (361)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 344444444 44667888888654 345777888899998887753
No 389
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=63.00 E-value=38 Score=29.70 Aligned_cols=80 Identities=10% Similarity=0.044 Sum_probs=48.6
Q ss_pred chhcc--cccccCCcccccceecHHHHHhhhcCC--c-----------------cc-ccCCCCcH-HHHHHHHHHHHHHh
Q psy6205 145 DIVTV--GKPMGNGHPVAAVITTKEIAKSFQETG--V-----------------EY-FNTYGGNP-VSCAVANAVMEVLE 201 (224)
Q Consensus 145 Di~~~--~K~l~~G~p~~av~~~~~i~~~~~~~~--~-----------------~~-~~T~~~~p-~~~aaa~a~l~~~~ 201 (224)
|++++ -|.|++-.-+|.+..+++..+.+.+.. . .+ ..|+.-.+ .+..+..++|+.+.
T Consensus 186 D~~~~s~~K~l~~P~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~ 265 (378)
T PRK03080 186 DVYTFSWQKVLGGEGGHGMAILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWAN 265 (378)
T ss_pred cEEEEehhhhCCCCCceEEEEECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHH
Confidence 66654 477755223577888888877654310 0 00 12332233 34455578899986
Q ss_pred hh----hHHHHHHHHHHHHHHhhhhcC
Q psy6205 202 TE----NLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 202 ~~----~l~~~~~~~g~~l~~~l~~l~ 224 (224)
+. +..++.+++.+++++.|++++
T Consensus 266 ~~gG~e~i~~r~~~l~~~l~~~l~~~~ 292 (378)
T PRK03080 266 SIGGLDALIARTAANASVLYDWAEKTP 292 (378)
T ss_pred HcCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 53 456778888889998887653
No 390
>PLN02656 tyrosine transaminase
Probab=62.65 E-value=1.1e+02 Score=27.02 Aligned_cols=72 Identities=14% Similarity=0.043 Sum_probs=41.4
Q ss_pred ccccccc-CCcccccceec--------HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHH
Q psy6205 148 TVGKPMG-NGHPVAAVITT--------KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQ 215 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~--------~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~ 215 (224)
+|||..+ .|+=+|.+++. +++.+.+.... ....+-++++.+++.+.|+.-.+ +...+.+++.-+.
T Consensus 238 SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~ 314 (409)
T PLN02656 238 SLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYF---DILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDI 314 (409)
T ss_pred ccchhccCcceeEEEEEEeCcccccccHHHHHHHHHHH---hhhcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 6999954 68999999983 57777665321 11123456777777777752111 1223344444455
Q ss_pred HHHhhhh
Q psy6205 216 LHTPKKE 222 (224)
Q Consensus 216 l~~~l~~ 222 (224)
+.+.|++
T Consensus 315 ~~~~L~~ 321 (409)
T PLN02656 315 CCDRIKE 321 (409)
T ss_pred HHHHHhh
Confidence 5555554
No 391
>KOG0256|consensus
Probab=62.44 E-value=1.2e+02 Score=27.41 Aligned_cols=146 Identities=11% Similarity=0.160 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-----------HHhC--Cccccccchhh-hhcC-
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-----------VQVG--FGRVGTHWWAF-QLQG- 139 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----------v~tG--~GrtG~~~~~~-~~~g- 139 (224)
.+.||+.+++..+.+.+|..+|+--=+.--|...++++....++=. |..| |+..+ |-.. +...
T Consensus 210 v~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~--F~Sv~ev~~~ 287 (471)
T KOG0256|consen 210 VEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSE--FRSVLEVRKD 287 (471)
T ss_pred HHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccCccC--ceEHHHHhhc
Confidence 3455555554444566787776653333456666555444433322 3333 55443 2222 1111
Q ss_pred CCCCCchh----ccccccc-CCcccccceec-HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhh---hHHHHHH
Q psy6205 140 DDIIPDIV----TVGKPMG-NGHPVAAVITT-KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETE---NLREHAL 210 (224)
Q Consensus 140 ~~v~pDi~----~~~K~l~-~G~p~~av~~~-~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~---~l~~~~~ 210 (224)
....||-+ .+||=+| -|+-+|++-.. +++..+...- ..++.-++-.--..+.+-.=+.+.++ .-..|++
T Consensus 288 ~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~km--ssf~~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~ 365 (471)
T KOG0256|consen 288 PHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKM--SSFGLVSSQTQYLLASLLSDEEFTREYLRENNKRLR 365 (471)
T ss_pred cccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHH--hhccCCcHHHHHHHHHHhchHHHHHHHHHHHHHHHH
Confidence 11357744 6899999 58888888774 4454444321 11111111111222222111333222 2245567
Q ss_pred HHHHHHHHhhhhcC
Q psy6205 211 DVGNQLHTPKKENN 224 (224)
Q Consensus 211 ~~g~~l~~~l~~l~ 224 (224)
..-.++-++|+++|
T Consensus 366 ~rh~~~~~gLk~lg 379 (471)
T KOG0256|consen 366 IRHRYIVEGLKALG 379 (471)
T ss_pred HHHHHHHhhHHhcC
Confidence 77778888888775
No 392
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=62.19 E-value=23 Score=32.21 Aligned_cols=73 Identities=11% Similarity=0.130 Sum_probs=40.0
Q ss_pred hccccccc-CCcccccceecH-HHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHH--hh---hhHHHHHHHHHHHHHHh
Q psy6205 147 VTVGKPMG-NGHPVAAVITTK-EIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVL--ET---ENLREHALDVGNQLHTP 219 (224)
Q Consensus 147 ~~~~K~l~-~G~p~~av~~~~-~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~--~~---~~l~~~~~~~g~~l~~~ 219 (224)
-+|||.++ .|+=+|.+++.+ .+.+.+.... .+ ..-+.++..++.+.|+-- .+ +...+++++.-+.+.+.
T Consensus 268 ~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~-~~---~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~ 343 (468)
T PLN02450 268 YSLSKDLGLPGFRVGAIYSNDEMVVSAATKMS-SF---GLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSG 343 (468)
T ss_pred EeccccCCCCCccEEEEEECCHHHHHHHHHHh-hc---CCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 37999998 899999999974 4555554321 11 123555555555555321 00 11234445555555566
Q ss_pred hhhc
Q psy6205 220 KKEN 223 (224)
Q Consensus 220 l~~l 223 (224)
|++.
T Consensus 344 L~~~ 347 (468)
T PLN02450 344 LEAA 347 (468)
T ss_pred HHHc
Confidence 6543
No 393
>PRK08354 putative aminotransferase; Provisional
Probab=60.79 E-value=27 Score=29.63 Aligned_cols=43 Identities=19% Similarity=0.216 Sum_probs=26.2
Q ss_pred ccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHH
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVM 197 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l 197 (224)
+|||.++ .|+-+|.+++ +.+.+... ...+..++.+.+++.+.+
T Consensus 179 S~SK~~~l~GlRiG~~v~---~~~~l~~~----~~~~~~~~~~~~~~~~~~ 222 (311)
T PRK08354 179 TFTKSYGLPGIRVGYVKG---FEEAFRSV----RMPWSIGSTGYAFLEFLI 222 (311)
T ss_pred ccHhhcCCccceeeeeee---hHHHHHHc----CCCccCCHHHHHHHHHHH
Confidence 6899999 8999999988 44445432 123344455544444443
No 394
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=60.02 E-value=32 Score=30.80 Aligned_cols=74 Identities=19% Similarity=0.336 Sum_probs=42.7
Q ss_pred Cchhc--ccccccC---Ccccccceec--------------HHHHHhhhcCCcccccCCCCcHH-H-HHHHHHHHHHH-h
Q psy6205 144 PDIVT--VGKPMGN---GHPVAAVITT--------------KEIAKSFQETGVEYFNTYGGNPV-S-CAVANAVMEVL-E 201 (224)
Q Consensus 144 pDi~~--~~K~l~~---G~p~~av~~~--------------~~i~~~~~~~~~~~~~T~~~~p~-~-~aaa~a~l~~~-~ 201 (224)
.|+|| .-|.|-| |+ ++++ +++.+.+... .+-.+.|+|. . .|+-..+|... +
T Consensus 223 ADvvt~sThKtl~GPrggi----I~~~~~~~~~~~~~~~~~~~l~~~I~~a---vfP~~qg~~h~~~iaalAval~ea~~ 295 (399)
T PF00464_consen 223 ADVVTGSTHKTLRGPRGGI----ILTNKGSKNVDKKGKEIDEELAEKIDSA---VFPGLQGGPHMHRIAALAVALKEALS 295 (399)
T ss_dssp SSEEEEESSGGG-SSS-EE----EEES-SEEEE-TTS-EEEHHHHHHHHHH---HTTTT-SS--HHHHHHHHHHHHHHTS
T ss_pred ceEEEeeccccccccCceE----EEEcCCccccCCcccccHHHHHHHhccc---cCCCcccCcchhHHHHHHHHHhcccC
Confidence 68886 5688865 34 6777 7888877643 2333333333 2 22222334443 3
Q ss_pred h--hhHHHHHHHHHHHHHHhhhhcC
Q psy6205 202 T--ENLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 202 ~--~~l~~~~~~~g~~l~~~l~~l~ 224 (224)
. .++.+++-++.+.|.+.|++.|
T Consensus 296 ~~fk~Ya~qVv~NAk~La~~L~~~G 320 (399)
T PF00464_consen 296 PEFKEYAKQVVKNAKALAEALQERG 320 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 2 3677788888888888887764
No 395
>PLN02231 alanine transaminase
Probab=59.21 E-value=33 Score=31.86 Aligned_cols=73 Identities=12% Similarity=0.056 Sum_probs=44.9
Q ss_pred ccccccc--CCccccccee---cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHH-------HH----h-hhhHHHHHH
Q psy6205 148 TVGKPMG--NGHPVAAVIT---TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVME-------VL----E-TENLREHAL 210 (224)
Q Consensus 148 ~~~K~l~--~G~p~~av~~---~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~-------~~----~-~~~l~~~~~ 210 (224)
.+||++. .|+-+|.+++ ++++.+.+... ...+...+.++.+++...++ .+ + .+.+.+.++
T Consensus 348 S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~---~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~ 424 (534)
T PLN02231 348 SVSKGYYGECGKRGGYMEVTGFTSDVREQIYKV---ASVNLCSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLA 424 (534)
T ss_pred ccCcccccCCccceEEEEEecCCHHHHHHHHHH---HhhhcCCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHH
Confidence 6799985 4888888876 68888877542 11223334455555555552 12 1 134566777
Q ss_pred HHHHHHHHhhhhc
Q psy6205 211 DVGNQLHTPKKEN 223 (224)
Q Consensus 211 ~~g~~l~~~l~~l 223 (224)
+.-+.+.+.|+++
T Consensus 425 ~r~~~l~~~L~~~ 437 (534)
T PLN02231 425 RRAKTLEDALNSL 437 (534)
T ss_pred HHHHHHHHHHhcC
Confidence 7777777777654
No 396
>PLN02624 ornithine-delta-aminotransferase
Probab=58.39 E-value=14 Score=33.75 Aligned_cols=20 Identities=50% Similarity=0.838 Sum_probs=16.8
Q ss_pred CCC-cceeeccCCceeEEEEe
Q psy6205 3 RYP-LIGDVRGIGLFVGVELV 22 (224)
Q Consensus 3 ~~p-~v~~vRg~Gl~~gielv 22 (224)
++| .++++||.|+|.++++.
T Consensus 367 ~~~~~i~~vrg~G~~~~i~l~ 387 (474)
T PLN02624 367 QFPKLIKEVRGRGLLNAVVLN 387 (474)
T ss_pred hCCCceEEEEeeEEEEEEEec
Confidence 366 47899999999999984
No 397
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=57.33 E-value=1.4e+02 Score=26.34 Aligned_cols=72 Identities=8% Similarity=0.060 Sum_probs=39.4
Q ss_pred ccccccc-CCcccccceec--HH-----HHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHH
Q psy6205 148 TVGKPMG-NGHPVAAVITT--KE-----IAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQL 216 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~--~~-----i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l 216 (224)
+|+|..+ .|+=+|.+++. ++ +.+.+... ...+.+-++++-.++.+.|+.-.+ +...+++++.-+++
T Consensus 238 S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 314 (403)
T TIGR01265 238 GISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNL---LQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELC 314 (403)
T ss_pred ecccccCCCcceEEEEEEeCchhhhHHHHHHHHHHH---hhhhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 6899965 58889998873 22 33333211 112344566776666666643111 23444455555566
Q ss_pred HHhhhh
Q psy6205 217 HTPKKE 222 (224)
Q Consensus 217 ~~~l~~ 222 (224)
.+.|++
T Consensus 315 ~~~L~~ 320 (403)
T TIGR01265 315 YEELKD 320 (403)
T ss_pred HHHHhc
Confidence 666654
No 398
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=56.86 E-value=1.6e+02 Score=26.88 Aligned_cols=140 Identities=12% Similarity=0.068 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhh--cCCCC-CCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQL--QGDDI-IPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~--~g~~v-~pDi 146 (224)
.++|++.|.. ..++.+.+|+..|-.+..|...+-++..+.+++. |-.-+|- +. .+..+. -+..+ ..|+
T Consensus 191 ~e~Le~aIt~--~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~-~~-~~~~~~~~~g~~~Grad~ 266 (444)
T TIGR03531 191 VEDIERAIEE--IGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGL-QS-NKYMELINKAIKVGRVDA 266 (444)
T ss_pred HHHHHHHHHh--ccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcC-cC-hhhhhhhhccccccCCCe
Confidence 5667777652 1236778888777544444455555555555555 2222321 11 010101 11012 3577
Q ss_pred hcc--cccccCCccccccee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHhh
Q psy6205 147 VTV--GKPMGNGHPVAAVIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQLHTPK 220 (224)
Q Consensus 147 ~~~--~K~l~~G~p~~av~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~~~l 220 (224)
+++ .|.+.....-|++++ ++++.+.+... +.+.....| +..+..+.+ .+-. ++++++-.++.+++.+.|
T Consensus 267 vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~---y~g~~~~s~-~~~~~~~ll-~~G~~g~~~li~~~~~~a~~l~~~L 341 (444)
T TIGR03531 267 VVSSTDKNFMVPVGGAIIYSFDENFIQEISKS---YPGRASASP-SLDVLITLL-SLGSKGYLELLKERKEMYKYLKELL 341 (444)
T ss_pred EEEeCccCCCCCCCEEEEEECCHHHHHHHHHh---ccCCCCChH-HHHHHHHHH-HhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 664 577652111233546 67787776542 112222223 232322222 3322 345666667777777777
Q ss_pred hhc
Q psy6205 221 KEN 223 (224)
Q Consensus 221 ~~l 223 (224)
+++
T Consensus 342 ~~l 344 (444)
T TIGR03531 342 QKL 344 (444)
T ss_pred HHH
Confidence 653
No 399
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=53.27 E-value=83 Score=27.87 Aligned_cols=79 Identities=19% Similarity=0.124 Sum_probs=49.5
Q ss_pred Cchhcc--cccccC--CcccccceecHHHHHhhhcCC------c-------------cc-ccCCCCcHH-HHHHHHHHHH
Q psy6205 144 PDIVTV--GKPMGN--GHPVAAVITTKEIAKSFQETG------V-------------EY-FNTYGGNPV-SCAVANAVME 198 (224)
Q Consensus 144 pDi~~~--~K~l~~--G~p~~av~~~~~i~~~~~~~~------~-------------~~-~~T~~~~p~-~~aaa~a~l~ 198 (224)
-|+++. -|+|++ |+ |.++.+++..+...... . .. ..|..-+|+ +.-+.+.+|+
T Consensus 176 iDv~~tgsQK~L~~ppGl--s~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~ 253 (374)
T TIGR01365 176 LDVVTFSWQKVLGGEGAH--GMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALK 253 (374)
T ss_pred CcEEEEechhccCCCCce--EEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHH
Confidence 566654 599985 54 56888888876544210 0 01 123333333 5556667777
Q ss_pred HHhhh----hHHHHHHHHHHHHHHhhhhcC
Q psy6205 199 VLETE----NLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 199 ~~~~~----~l~~~~~~~g~~l~~~l~~l~ 224 (224)
.|+++ +..+|-+++++.+++.++++|
T Consensus 254 ~i~~egGle~~~~Rh~~~a~~l~~~l~~lg 283 (374)
T TIGR01365 254 WAESIGGLKPLIARADDNLAVLEAFVAKNN 283 (374)
T ss_pred HHHHccCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 77553 567777899999999998875
No 400
>PHA02675 ORF104 fusion protein; Provisional
Probab=53.25 E-value=9.9 Score=25.95 Aligned_cols=16 Identities=38% Similarity=0.472 Sum_probs=9.9
Q ss_pred HHHHHHHH-HHhCCccc
Q psy6205 113 YLREVYKH-VQVGFGRV 128 (224)
Q Consensus 113 ~l~~~~~~-v~tG~Grt 128 (224)
.+..-+++ ||||++|.
T Consensus 74 Ml~L~KKIDVQTG~~ry 90 (90)
T PHA02675 74 LLKLNTKIDVQTGYSRY 90 (90)
T ss_pred HHHHHhhcceeccccCC
Confidence 33344444 99999873
No 401
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=53.17 E-value=77 Score=28.68 Aligned_cols=36 Identities=28% Similarity=0.290 Sum_probs=22.6
Q ss_pred CCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHH
Q psy6205 182 TYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLH 217 (224)
Q Consensus 182 T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~ 217 (224)
.+..+|..+..++..|+-+.. +.-.+|+.++.+.|.
T Consensus 271 g~~~sp~~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~ 308 (432)
T PRK06702 271 GNCMSPFNAYISNIGLETLHLRMERHSENALAVAKWLA 308 (432)
T ss_pred cCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHH
Confidence 457889999988888877642 223444555555443
No 402
>PLN02880 tyrosine decarboxylase
Probab=52.42 E-value=1.6e+02 Score=27.02 Aligned_cols=144 Identities=12% Similarity=0.115 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCc---cccccchhhhhcCCCC-CCc
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFG---RVGTHWWAFQLQGDDI-IPD 145 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~G---rtG~~~~~~~~~g~~v-~pD 145 (224)
.+.|++.+++..+.+..+.+|+..--....|.+-|-++.-+.+++. |-..+| ..-. -+-+.-.| + .+|
T Consensus 223 ~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~-~~~~~l~g--ie~aD 299 (490)
T PLN02880 223 PELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICP-EYRHYIDG--VEEAD 299 (490)
T ss_pred HHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCH-HHHHHhcC--chhcC
Confidence 4667666654333455667777776666678888988888888887 222121 0000 00001122 4 577
Q ss_pred hhc--ccccccCCcccccceecHHH--HHhhhcCCcccc-c-------CC--------CCcHHHHHHHHHHHHHHhhhhH
Q psy6205 146 IVT--VGKPMGNGHPVAAVITTKEI--AKSFQETGVEYF-N-------TY--------GGNPVSCAVANAVMEVLETENL 205 (224)
Q Consensus 146 i~~--~~K~l~~G~p~~av~~~~~i--~~~~~~~~~~~~-~-------T~--------~~~p~~~aaa~a~l~~~~~~~l 205 (224)
-++ .=|-+..-++.|++++++.- .+.+.... .+. + ++ .+-.......-.+|+.+=.+++
T Consensus 300 Sit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~-~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~ 378 (490)
T PLN02880 300 SFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNP-EFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENL 378 (490)
T ss_pred EEEECchhhcCCCccEEEEEEeCHHHHHHHHccCH-HHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHH
Confidence 665 46777556888889987422 22222111 010 0 00 1111112233345777767788
Q ss_pred HHHHH---HHHHHHHHhhhh
Q psy6205 206 REHAL---DVGNQLHTPKKE 222 (224)
Q Consensus 206 ~~~~~---~~g~~l~~~l~~ 222 (224)
.++++ ++.+++.+.|++
T Consensus 379 ~~~i~~~~~lA~~~~~~l~~ 398 (490)
T PLN02880 379 QSYIRNHIKLAKEFEQLVAQ 398 (490)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 88887 999999988865
No 403
>PRK05939 hypothetical protein; Provisional
Probab=51.76 E-value=37 Score=30.17 Aligned_cols=69 Identities=16% Similarity=0.215 Sum_probs=40.3
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchh--cccccccC-Cccccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN-GHPVAA 161 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~-G~p~~a 161 (224)
++..+|++|.+....|.+.+-+.+.+.+++. |-.-+ -++. . ++-.. .-.|++ .++|-++| |--++.
T Consensus 130 ~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD~t~-a~~~-~--~~~~~--~gaDivv~S~sK~~~g~g~~igg 203 (397)
T PRK05939 130 PNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVDNTM-TSPW-L--FRPKD--VGASLVINSLSKYIAGHGNALGG 203 (397)
T ss_pred CCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEECCc-cccc-c--cCccc--cCCEEEEecCeecccCCCCeEEE
Confidence 3577899998887788877666666666665 10001 0111 1 11111 236776 57999987 545555
Q ss_pred cee
Q psy6205 162 VIT 164 (224)
Q Consensus 162 v~~ 164 (224)
++.
T Consensus 204 ~v~ 206 (397)
T PRK05939 204 AVT 206 (397)
T ss_pred EEe
Confidence 555
No 404
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=50.60 E-value=24 Score=30.90 Aligned_cols=21 Identities=62% Similarity=1.094 Sum_probs=17.6
Q ss_pred CCcceeeccCCceeEEEEeec
Q psy6205 4 YPLIGDVRGIGLFVGVELVTC 24 (224)
Q Consensus 4 ~p~v~~vRg~Gl~~gielv~~ 24 (224)
++.+.++|+.|.+.++++...
T Consensus 336 ~~~~~~~~~~g~~~~~~~~~~ 356 (413)
T cd00610 336 HPLVGDVRGRGLMIGIELVKD 356 (413)
T ss_pred CCcEEEeecCceEEEEEEecC
Confidence 466788999999999999754
No 405
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=49.68 E-value=20 Score=31.28 Aligned_cols=19 Identities=32% Similarity=0.677 Sum_probs=17.1
Q ss_pred CCCcceeeccCCceeEEEE
Q psy6205 3 RYPLIGDVRGIGLFVGVEL 21 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~giel 21 (224)
+||.+.++||.|++.++|+
T Consensus 307 ~~~~~~~~~~~g~~~~~~~ 325 (375)
T PRK04260 307 DKETVTTVRGLGYMIGIET 325 (375)
T ss_pred hCCCeeEEeccceEEEEEe
Confidence 4677889999999999999
No 406
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=49.52 E-value=31 Score=30.27 Aligned_cols=75 Identities=12% Similarity=0.172 Sum_probs=38.2
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCC-CccccCCCCCCCCCChhHHHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPC-PDVYRGKYPADKYPDEDLGVKYAQDVQDL 81 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~-P~~yr~~~~~~~~~~~~~~~~~~~~l~~~ 81 (224)
.++.+.++|+.|+|.++++..... . . +..+.......++...|. +++.|....... +++..++.++.|++.
T Consensus 321 ~~~~~~~~~~~g~~~~v~~~~~~~--~--~--~~~~~~~l~~~Gv~v~~~~~~~lRi~~~~~~--~~~~i~~~l~~l~~~ 392 (400)
T PTZ00125 321 KSPWVKEIRGKGLLNAIVFDHSDG--V--N--AWDLCLKLKENGLLAKPTHDNIIRFAPPLVI--TKEQLDQALEIIKKV 392 (400)
T ss_pred cCCCeEEEecccEEEEEEEccCcc--h--H--HHHHHHHHHHCCeEEeecCCCEEEEECCccC--CHHHHHHHHHHHHHH
Confidence 467788899999999999853111 0 1 111111111123333322 233333222111 256667777777777
Q ss_pred HHHH
Q psy6205 82 IEAM 85 (224)
Q Consensus 82 ~~~~ 85 (224)
++++
T Consensus 393 l~~~ 396 (400)
T PTZ00125 393 LKSF 396 (400)
T ss_pred HHHH
Confidence 7654
No 407
>PRK06836 aspartate aminotransferase; Provisional
Probab=48.80 E-value=24 Score=31.09 Aligned_cols=73 Identities=8% Similarity=0.054 Sum_probs=39.4
Q ss_pred ccccccc-CCcccccceecHHHHHh--hhcC---CcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 148 TVGKPMG-NGHPVAAVITTKEIAKS--FQET---GVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~~~i~~~--~~~~---~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
+++|.+| .|+-+|.+++++++.+. +... ..........+++...++...++ +....++.++.-+.+.+.|+
T Consensus 241 S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~---~~~~~~~~~~~r~~l~~~L~ 317 (394)
T PRK06836 241 SFSKSLSLPGERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLD---ATVDVSIYKRNRDLLYDGLT 317 (394)
T ss_pred cchhhccCcceeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhC---ChHHHHHHHHHHHHHHHHHH
Confidence 4899998 68999999998876432 1110 00011123445555555544442 22234445555566666665
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
+.
T Consensus 318 ~~ 319 (394)
T PRK06836 318 EL 319 (394)
T ss_pred hC
Confidence 43
No 408
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=48.18 E-value=76 Score=28.30 Aligned_cols=77 Identities=21% Similarity=0.217 Sum_probs=49.9
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchhc--ccccccC-Cccccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN-GHPVAA 161 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~-G~p~~a 161 (224)
++..||.+|.|-.-++.++.-+..-+-..+. |-.-|+ |. |-++-+. --.|||+ +.|=+|| |-.||.
T Consensus 146 ~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~a-tp---yl~rP~~--hGADIVvHS~TK~igGhGt~iGG 219 (426)
T COG2873 146 ENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFA-TP---YLCRPIE--HGADIVVHSATKYIGGHGTAIGG 219 (426)
T ss_pred cccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEecCCC-cc---eecchhh--cCCCEEEEeecccccCCccccce
Confidence 4778999999877777776665555555555 322231 22 2223221 2379986 7899988 788999
Q ss_pred ceecHHHHHhh
Q psy6205 162 VITTKEIAKSF 172 (224)
Q Consensus 162 v~~~~~i~~~~ 172 (224)
+++..--.|+-
T Consensus 220 ~iVD~G~FDw~ 230 (426)
T COG2873 220 VIVDGGKFDWT 230 (426)
T ss_pred EEEeCCccccc
Confidence 99876666654
No 409
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=46.80 E-value=25 Score=30.97 Aligned_cols=19 Identities=37% Similarity=0.670 Sum_probs=16.4
Q ss_pred CCcceeeccCCceeEEEEe
Q psy6205 4 YPLIGDVRGIGLFVGVELV 22 (224)
Q Consensus 4 ~p~v~~vRg~Gl~~gielv 22 (224)
++.+.++||.|+|+++++.
T Consensus 328 ~~~~~~~~g~g~~~~i~~~ 346 (401)
T TIGR01885 328 KPIITEVRGRGLLNAIVID 346 (401)
T ss_pred CCceeEEeecCeeEEEEec
Confidence 4677899999999999984
No 410
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=45.37 E-value=21 Score=31.04 Aligned_cols=21 Identities=29% Similarity=0.668 Sum_probs=17.8
Q ss_pred CCCcceeeccCCceeEEEEee
Q psy6205 3 RYPLIGDVRGIGLFVGVELVT 23 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~ 23 (224)
.+|.+.++|+.|++.++++..
T Consensus 309 ~~~~~~~v~~~g~~~~i~~~~ 329 (377)
T PRK02936 309 HLECVKNIRGKGLMIGIECTE 329 (377)
T ss_pred hCCcEEeEeecceEEEEEecc
Confidence 367788999999999999853
No 411
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=44.66 E-value=1.2e+02 Score=26.82 Aligned_cols=78 Identities=18% Similarity=0.203 Sum_probs=49.2
Q ss_pred chhcc--cccccCCcccccceecHHHHHhhhcCCcc---------cccCCCCcHH-HHHHHHHHHHHHhhh-----hHHH
Q psy6205 145 DIVTV--GKPMGNGHPVAAVITTKEIAKSFQETGVE---------YFNTYGGNPV-SCAVANAVMEVLETE-----NLRE 207 (224)
Q Consensus 145 Di~~~--~K~l~~G~p~~av~~~~~i~~~~~~~~~~---------~~~T~~~~p~-~~aaa~a~l~~~~~~-----~l~~ 207 (224)
|++.. =|.||- --++.++.+++..+........ ..+||.=+|+ ..=+...+|+.|.++ ...+
T Consensus 190 dvi~agsQKnlgP-~Gltvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~ 268 (364)
T PRK12462 190 GMVYAHAQKNLGP-AGVTVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRD 268 (364)
T ss_pred cEEEeeccccCCC-CceEEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHH
Confidence 55543 488872 1245688999888765432101 1246644444 666777899999765 4666
Q ss_pred HHHHHHHHHHHhhhhc
Q psy6205 208 HALDVGNQLHTPKKEN 223 (224)
Q Consensus 208 ~~~~~g~~l~~~l~~l 223 (224)
+-+++++.+++.++++
T Consensus 269 r~~~ka~~ly~~id~~ 284 (364)
T PRK12462 269 INARKAAMLYATLDAL 284 (364)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 6778888888887754
No 412
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=44.24 E-value=35 Score=30.15 Aligned_cols=24 Identities=13% Similarity=0.086 Sum_probs=17.7
Q ss_pred CCCcceeeccC--------CceeEEEEeecCC
Q psy6205 3 RYPLIGDVRGI--------GLFVGVELVTCRK 26 (224)
Q Consensus 3 ~~p~v~~vRg~--------Gl~~gielv~~~~ 26 (224)
.+|.|+||||. |+|.++++..++.
T Consensus 282 ~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~ 313 (392)
T PLN03227 282 SHPYALKLRNRLVITSDPISPIIYLRLSDQEA 313 (392)
T ss_pred CCccccccccccccCCCCCCCEEEEEeCCHHH
Confidence 47889999995 4589999854333
No 413
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=44.10 E-value=78 Score=27.77 Aligned_cols=73 Identities=19% Similarity=0.262 Sum_probs=38.8
Q ss_pred cccccccC-Cccccccee---cHHH----HHhhhcCCcccccCCC-CcHHHHHHHHHHHHH------Hhh--hhHHHHHH
Q psy6205 148 TVGKPMGN-GHPVAAVIT---TKEI----AKSFQETGVEYFNTYG-GNPVSCAVANAVMEV------LET--ENLREHAL 210 (224)
Q Consensus 148 ~~~K~l~~-G~p~~av~~---~~~i----~~~~~~~~~~~~~T~~-~~p~~~aaa~a~l~~------~~~--~~l~~~~~ 210 (224)
+|||.++- |+=+|.+++ +++. .+.+.. ....++. .++++..++.+.|+- +++ +++.++.+
T Consensus 243 SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~ 319 (396)
T PRK09257 243 SFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKA---TIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIK 319 (396)
T ss_pred EcCCcCccccccceeEEEEeCCHHHHHHHHHHHHH---HhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 68999995 888898873 4443 333321 1112333 355555555554431 111 13455566
Q ss_pred HHHHHHHHhhhhc
Q psy6205 211 DVGNQLHTPKKEN 223 (224)
Q Consensus 211 ~~g~~l~~~l~~l 223 (224)
+.-+.+.+.|++.
T Consensus 320 ~rr~~l~~~L~~~ 332 (396)
T PRK09257 320 AMRQLLVEALKAK 332 (396)
T ss_pred HHHHHHHHHHHhc
Confidence 6666666666553
No 414
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=42.19 E-value=2.4e+02 Score=25.90 Aligned_cols=48 Identities=13% Similarity=0.093 Sum_probs=27.2
Q ss_pred ccccccc-CCccccccee--cHHH----HHhhhcCCcccccCCCCcHHHHHHHHHHHH
Q psy6205 148 TVGKPMG-NGHPVAAVIT--TKEI----AKSFQETGVEYFNTYGGNPVSCAVANAVME 198 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~--~~~i----~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~ 198 (224)
+|||..+ .|+-+|.+++ ++++ .+.+... ....+..|.++-.++.++|+
T Consensus 350 S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~q~a~~~aL~ 404 (517)
T PRK13355 350 GLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNML---ANMRLCSNVPAQSIVQTALG 404 (517)
T ss_pred cchhhccCcccceEEEEeeCchhhHHHHHHHHHHH---hcCcCCcChHHHHHHHHHhc
Confidence 3799976 5788898884 3443 3333211 11223455666666666664
No 415
>PRK08637 hypothetical protein; Provisional
Probab=42.14 E-value=73 Score=27.89 Aligned_cols=51 Identities=12% Similarity=0.014 Sum_probs=32.5
Q ss_pred ccccccc-CCcccccceec------HHHHHhhhcCCc-ccc-cCCCCcHHHHHHHHHHHH
Q psy6205 148 TVGKPMG-NGHPVAAVITT------KEIAKSFQETGV-EYF-NTYGGNPVSCAVANAVME 198 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~------~~i~~~~~~~~~-~~~-~T~~~~p~~~aaa~a~l~ 198 (224)
.++|..+ .|+-+|.++.. +++.+.+..... ... ..++.|.++.+++.+.|+
T Consensus 224 s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~ 283 (388)
T PRK08637 224 GATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALN 283 (388)
T ss_pred cccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhC
Confidence 5899866 58999998853 677777653100 011 223567788888777763
No 416
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=41.20 E-value=36 Score=29.98 Aligned_cols=19 Identities=63% Similarity=1.104 Sum_probs=16.4
Q ss_pred CCcceeeccCCceeEEEEe
Q psy6205 4 YPLIGDVRGIGLFVGVELV 22 (224)
Q Consensus 4 ~p~v~~vRg~Gl~~gielv 22 (224)
+|.+.++||.|+|.++++.
T Consensus 328 ~~~i~~~~~~g~~~~~~~~ 346 (396)
T PRK04073 328 NPMIKEVRGRGLFIGVELN 346 (396)
T ss_pred CCcccceecceEEEEEEec
Confidence 4668899999999999985
No 417
>KOG0259|consensus
Probab=40.91 E-value=2e+02 Score=25.84 Aligned_cols=41 Identities=12% Similarity=0.251 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH
Q psy6205 73 KYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH 120 (224)
Q Consensus 73 ~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~ 120 (224)
-.++.+|.+++ ..++|-||+.|----|+ +.+.+-|+++.+.
T Consensus 187 IDL~~veal~D-----ENT~AivviNP~NPcGn--Vys~~HL~kiae~ 227 (447)
T KOG0259|consen 187 IDLDGVEALAD-----ENTVAIVVINPNNPCGN--VYSEDHLKKIAET 227 (447)
T ss_pred echHHHHHhhc-----cCeeEEEEeCCCCCCcc--cccHHHHHHHHHH
Confidence 34677777775 35889999999544444 5677888888777
No 418
>COG2082 CobH Precorrin isomerase [Coenzyme metabolism]
Probab=40.86 E-value=51 Score=26.80 Aligned_cols=46 Identities=30% Similarity=0.522 Sum_probs=30.5
Q ss_pred CcccccceecHHHHHhhhcCCcccc---cCCCCcHHHHHHHHHHHHHHhh
Q psy6205 156 GHPVAAVITTKEIAKSFQETGVEYF---NTYGGNPVSCAVANAVMEVLET 202 (224)
Q Consensus 156 G~p~~av~~~~~i~~~~~~~~~~~~---~T~~~~p~~~aaa~a~l~~~~~ 202 (224)
|+|+|-+- ..+-.+.+......+. ++.+|.|++.|+.++-++...+
T Consensus 160 g~PVGFv~-AaesKe~L~~~~iP~itv~G~rGGS~vAaAivNaL~~~~~~ 208 (210)
T COG2082 160 GVPVGFVG-AAESKEALRESPIPYITVRGRRGGSPVAAAIVNALADLAWE 208 (210)
T ss_pred EcCCcccc-hHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHHHhc
Confidence 45665443 3445555554433333 8999999999999998887654
No 419
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=39.29 E-value=2.9e+02 Score=24.92 Aligned_cols=142 Identities=12% Similarity=0.029 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-HHhCCc-cc---cccch------hhhhcCCC--
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-VQVGFG-RV---GTHWW------AFQLQGDD-- 141 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-v~tG~G-rt---G~~~~------~~~~~g~~-- 141 (224)
.++|++.+. ++...|++--+..+-|.+.|-++.-+.+++. ..+|.+ .. +. +. .......+
T Consensus 176 ~~~L~~~i~------~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaa-q~g~~~p~~~~~~~~~~~ 248 (431)
T TIGR01788 176 PEQVVEAVD------ENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAA-SGGFIAPFVYPDLEWDFR 248 (431)
T ss_pred HHHHHHHHh------hCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecc-cHHHHHHHhCCCchhhcC
Confidence 456666554 2355677766778889999999888888765 322210 00 00 00 01111100
Q ss_pred -CCCchhcc-cccccCC-cccccceecHH--HHHhhhcCC----ccc-ccCCCCcHH--HHHHHHHHHHHHhh---hhHH
Q psy6205 142 -IIPDIVTV-GKPMGNG-HPVAAVITTKE--IAKSFQETG----VEY-FNTYGGNPV--SCAVANAVMEVLET---ENLR 206 (224)
Q Consensus 142 -v~pDi~~~-~K~l~~G-~p~~av~~~~~--i~~~~~~~~----~~~-~~T~~~~p~--~~aaa~a~l~~~~~---~~l~ 206 (224)
...|.+++ +-.++.| +..|+++.+++ +.+.+.... ... ..|..+..- ..+..-.+|..+-. +.+.
T Consensus 249 ~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~ 328 (431)
T TIGR01788 249 LPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIM 328 (431)
T ss_pred CCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHH
Confidence 12454554 3333434 66788888765 333332110 000 013322221 22334445555533 3566
Q ss_pred HHHHHHHHHHHHhhhhc
Q psy6205 207 EHALDVGNQLHTPKKEN 223 (224)
Q Consensus 207 ~~~~~~g~~l~~~l~~l 223 (224)
++..++.++|.++|+++
T Consensus 329 ~~~~~la~~l~~~L~~~ 345 (431)
T TIGR01788 329 QNSLDVARYLAEEIAKL 345 (431)
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 77889999999999865
No 420
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=38.15 E-value=1.4e+02 Score=26.82 Aligned_cols=75 Identities=25% Similarity=0.359 Sum_probs=42.7
Q ss_pred Cchhc--ccccccC---CcccccceecH-HHHHhhhcCCcccccCCCCcHHHHHHH--HHHHHHHh-h-hhHHHHHHHHH
Q psy6205 144 PDIVT--VGKPMGN---GHPVAAVITTK-EIAKSFQETGVEYFNTYGGNPVSCAVA--NAVMEVLE-T-ENLREHALDVG 213 (224)
Q Consensus 144 pDi~~--~~K~l~~---G~p~~av~~~~-~i~~~~~~~~~~~~~T~~~~p~~~aaa--~a~l~~~~-~-~~l~~~~~~~g 213 (224)
.|+|| .=|.|-| |+ +++++ ++.+.+... .|-.+.+|+-+-.-|| .+.-+.++ + ....+++-++.
T Consensus 220 AdvVTtTTHKTlrGPrGG~----Il~~~eel~kkin~a--VFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NA 293 (413)
T COG0112 220 ADVVTTTTHKTLRGPRGGI----ILTNDEELAKKINSA--VFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNA 293 (413)
T ss_pred cceEeCCcccCCCCCCceE----EEeccHHHHHHhhhh--cCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHH
Confidence 67774 6788864 45 67774 888877643 3444544443333333 23334443 2 35666666777
Q ss_pred HHHHHhhhhcC
Q psy6205 214 NQLHTPKKENN 224 (224)
Q Consensus 214 ~~l~~~l~~l~ 224 (224)
+.|.+.|.+.|
T Consensus 294 kaLAe~l~~~G 304 (413)
T COG0112 294 KALAEALKERG 304 (413)
T ss_pred HHHHHHHHHcC
Confidence 77777766543
No 421
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=37.83 E-value=57 Score=29.87 Aligned_cols=73 Identities=11% Similarity=0.073 Sum_probs=34.4
Q ss_pred CCcc-eeeccCCceeEEEEeecCC-----CCCCccccchhhhccCCCcceeecCCCccccCCC-CCCCCCChhHHHHHHH
Q psy6205 4 YPLI-GDVRGIGLFVGVELVTCRK-----QKTPATSEAQHVITRPPVRMSTEAPCPDVYRGKY-PADKYPDEDLGVKYAQ 76 (224)
Q Consensus 4 ~p~v-~~vRg~Gl~~gielv~~~~-----t~~p~~~~a~~l~~~~~~~~~~~vp~P~~yr~~~-~~~~~~~~~~~~~~~~ 76 (224)
+|.+ +++|| |+|++++.++- ...+.......+...++..+++..+.. +...+ +... +++..++.++
T Consensus 393 ~~~~~~~v~g---~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~--~~~~~psl~h--t~~dId~~l~ 465 (474)
T PLN02482 393 HEMCGGYISG---MFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQ--FEAGFTSLAH--TEEDIDFTIA 465 (474)
T ss_pred CCEEEcccce---EEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccC--CCCCcCCCCC--CHHHHHHHHH
Confidence 4655 57777 88999986431 111222222333344333455443321 11111 1111 2556666666
Q ss_pred HHHHHHH
Q psy6205 77 DVQDLIE 83 (224)
Q Consensus 77 ~l~~~~~ 83 (224)
.+++.+.
T Consensus 466 al~~~l~ 472 (474)
T PLN02482 466 AAERVLA 472 (474)
T ss_pred HHHHHHH
Confidence 6666654
No 422
>PLN02672 methionine S-methyltransferase
Probab=37.12 E-value=52 Score=33.45 Aligned_cols=75 Identities=7% Similarity=0.025 Sum_probs=40.0
Q ss_pred ccccccc-CCcccccceec-HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHH----Hhh--hhHHHHHHHHHHHHHHh
Q psy6205 148 TVGKPMG-NGHPVAAVITT-KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEV----LET--ENLREHALDVGNQLHTP 219 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~-~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~----~~~--~~l~~~~~~~g~~l~~~ 219 (224)
+|||..+ .|+-+|.+++. +++.+.+.... .....+..+..+.+++++.++. +.+ .+..+.+++.-+++.+.
T Consensus 907 SfSKkf~lpGLRIGylIap~~eLi~~l~~~~-~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~ 985 (1082)
T PLN02672 907 GLSTELLSGGHEFGFLALNDSVLIDAFHSAP-GLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKET 985 (1082)
T ss_pred CcHHhhccHHHHheeEEeCCHHHHHHHHHhh-hhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6798887 47999999985 45888775421 1111222234444444443320 100 12333455556666666
Q ss_pred hhhc
Q psy6205 220 KKEN 223 (224)
Q Consensus 220 l~~l 223 (224)
|++.
T Consensus 986 L~~~ 989 (1082)
T PLN02672 986 LEAC 989 (1082)
T ss_pred HHHC
Confidence 6543
No 423
>PLN02187 rooty/superroot1
Probab=36.85 E-value=83 Score=28.54 Aligned_cols=75 Identities=12% Similarity=0.027 Sum_probs=39.8
Q ss_pred ccccccc-CCcccccceec-H-HHH---HhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHH
Q psy6205 148 TVGKPMG-NGHPVAAVITT-K-EIA---KSFQETGVEYFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQLHT 218 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~~-~-~i~---~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~~ 218 (224)
+|||..+ .|+-+|.+++. + .+. +.+......+..+...+.++-+++.+.|+.-.+ +...+.+++.-+++.+
T Consensus 273 SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~ 352 (462)
T PLN02187 273 GISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCD 352 (462)
T ss_pred cchhhcCCccceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 6899965 68999999983 2 222 233221001112223367777777777753111 1233445555556666
Q ss_pred hhhh
Q psy6205 219 PKKE 222 (224)
Q Consensus 219 ~l~~ 222 (224)
.|++
T Consensus 353 ~L~~ 356 (462)
T PLN02187 353 RLKD 356 (462)
T ss_pred HHhh
Confidence 6654
No 424
>PF06786 UPF0253: Uncharacterised protein family (UPF0253); InterPro: IPR009624 This is a group of proteins of unknown function.
Probab=35.98 E-value=78 Score=20.40 Aligned_cols=34 Identities=15% Similarity=0.105 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhh
Q psy6205 187 PVSCAVANAVMEVL-ETENLREHALDVGNQLHTPK 220 (224)
Q Consensus 187 p~~~aaa~a~l~~~-~~~~l~~~~~~~g~~l~~~l 220 (224)
|-+...++.+|+.| .++.|.+.+++...+-...|
T Consensus 24 P~Ai~calk~Ln~iAad~~Lp~~vRE~AAfAAANL 58 (66)
T PF06786_consen 24 PDAIGCALKTLNDIAADEALPEDVREQAAFAAANL 58 (66)
T ss_pred cHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHH
Confidence 67777789999999 46788888888877654443
No 425
>COG1698 Uncharacterized protein conserved in archaea [Function unknown]
Probab=35.42 E-value=72 Score=22.22 Aligned_cols=37 Identities=19% Similarity=0.169 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 187 PVSCAVANAVMEVL-ETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 187 p~~~aaa~a~l~~~-~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
.+-||.|...||.+ .++++..+.+.+--.+...|+.+
T Consensus 54 ~vRaAtaIsiLeeisnDPNmP~h~RT~iw~vis~LE~i 91 (93)
T COG1698 54 AVRAATAISILEEISNDPNMPLHARTLIWNVISQLETI 91 (93)
T ss_pred hhHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHhc
Confidence 47899999999999 57899999988888887777653
No 426
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=35.24 E-value=3.3e+02 Score=24.33 Aligned_cols=72 Identities=11% Similarity=0.030 Sum_probs=36.0
Q ss_pred cccccc-cCCccccccee--cHHHHH------hhhcCCcccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHH
Q psy6205 148 TVGKPM-GNGHPVAAVIT--TKEIAK------SFQETGVEYFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQ 215 (224)
Q Consensus 148 ~~~K~l-~~G~p~~av~~--~~~i~~------~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~ 215 (224)
.|||.. .-|+=+|.+++ .+.+.+ .+... ...+..-+.+.-+++.+.|+.-.+ ++..+.+++.-+.
T Consensus 259 S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 335 (430)
T PLN00145 259 SISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNY---LNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADI 335 (430)
T ss_pred ccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHH---hcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 589994 46888999986 343332 22211 111112244555555555542111 1234445555556
Q ss_pred HHHhhhh
Q psy6205 216 LHTPKKE 222 (224)
Q Consensus 216 l~~~l~~ 222 (224)
+.+.|++
T Consensus 336 ~~~~L~~ 342 (430)
T PLN00145 336 CYEKIKE 342 (430)
T ss_pred HHHHHhc
Confidence 6666654
No 427
>KOG0257|consensus
Probab=35.01 E-value=1e+02 Score=27.76 Aligned_cols=74 Identities=19% Similarity=0.179 Sum_probs=44.6
Q ss_pred cccccccC-CcccccceecHHHHHhhhcCCcccccCCCCc-H--HHHHHHHHHHHH--------HhhhhHHHHHHHHHHH
Q psy6205 148 TVGKPMGN-GHPVAAVITTKEIAKSFQETGVEYFNTYGGN-P--VSCAVANAVMEV--------LETENLREHALDVGNQ 215 (224)
Q Consensus 148 ~~~K~l~~-G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~-p--~~~aaa~a~l~~--------~~~~~l~~~~~~~g~~ 215 (224)
.+||..|- |.-||.+++.+.++....... .-..|.-+ | -+++++.+ ++. +....+....++.=+.
T Consensus 242 S~gKtf~~TGWrlGW~igp~~L~~~~~~vh--~~~~~~~~Tp~q~A~a~a~~-~~~~~~~p~~~y~~~~~~~~y~~krdi 318 (420)
T KOG0257|consen 242 SFGKTFGVTGWRLGWAIGPKHLYSALFPVH--QNFVFTCPTPIQEASAAAFA-LELACLQPGGSYFITELVKEYKEKRDI 318 (420)
T ss_pred cccceeeeeeeeeeeeechHHhhhhHHHHh--hccccccCcHHHHHHHHHHh-hhhhccCCcchhHHHHHHHHHHHHHHH
Confidence 57999985 889999999888887765421 11222222 2 23333332 222 1122366667778888
Q ss_pred HHHhhhhcC
Q psy6205 216 LHTPKKENN 224 (224)
Q Consensus 216 l~~~l~~l~ 224 (224)
|.+.|.++|
T Consensus 319 l~k~L~~lg 327 (420)
T KOG0257|consen 319 LAKALEELG 327 (420)
T ss_pred HHHHHHhcC
Confidence 888888775
No 428
>PRK05575 cbiC precorrin-8X methylmutase; Validated
Probab=32.99 E-value=58 Score=26.33 Aligned_cols=43 Identities=28% Similarity=0.424 Sum_probs=27.4
Q ss_pred CcccccceecHHHHHhhhcCCccc---ccCCCCcHHHHHHHHHHHHH
Q psy6205 156 GHPVAAVITTKEIAKSFQETGVEY---FNTYGGNPVSCAVANAVMEV 199 (224)
Q Consensus 156 G~p~~av~~~~~i~~~~~~~~~~~---~~T~~~~p~~~aaa~a~l~~ 199 (224)
|+|+|-|-. .|-.+.+.+.+..+ -++-+|+|++.|+.++-|..
T Consensus 158 G~PVGFV~A-~ESKe~L~~~~vP~It~~G~kGGS~vAaAivNALl~~ 203 (204)
T PRK05575 158 AVPVGFVGA-AESKEELEKLDIPYITVRGRKGGSTVAAAIVNALMYM 203 (204)
T ss_pred EeCCccccH-HHHHHHHHhCCCCEEEEecCCCcHHHHHHHHHHHHHh
Confidence 456665544 33334444333233 38999999999999987765
No 429
>PF02570 CbiC: Precorrin-8X methylmutase; InterPro: IPR003722 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CbiC and CobH precorrin-8X methylmutase (also known as precorrin isomerase, 5.4.1.2 from EC), both as stand-alone enzymes and when CobJ forms part of a bifunctional enzyme. CobH and CbiC from the aerobic and anaerobic pathways, respectively, catalyse a methyl rearrangement in precorrin-8 that moves the methyl group from C-11 to C-12 to produce hydrogenobyrinic acid []. Hydrogenobyrinic acid now contains all the major framework alterations associated with corrin synthesis []. CobH and CbiC can sometimes be fused to other enzymes in the cobalamin pathway to make bifunctional enzymes: e.g., with CobJ/CibH (precorrin-3B C17-methylase/precorrin isomerase, IPR014422 from INTERPRO) and with CbiX (precorrin isomerase, IPR012067 from INTERPRO).; GO: 0016993 precorrin-8X methylmutase activity, 0009236 cobalamin biosynthetic process; PDB: 1V9C_B 1I1H_A 1F2V_A 1OU0_B 2AFV_A 2AFR_A 3E7D_D.
Probab=32.85 E-value=54 Score=26.40 Aligned_cols=50 Identities=34% Similarity=0.620 Sum_probs=26.1
Q ss_pred CCCchhcccccccCCcccccceecHHHHHhhhcCCcccc---cCCCCcHHHHHHHHHHHHH
Q psy6205 142 IIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYF---NTYGGNPVSCAVANAVMEV 199 (224)
Q Consensus 142 v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~---~T~~~~p~~~aaa~a~l~~ 199 (224)
++|++++ |+|+|-|-. .|-.+.+.+.+..+. ++.+|+|++.|+.++.|..
T Consensus 144 ~~PalVI-------g~PVGFV~A-~ESKe~L~~~~vP~I~~~G~kGGS~vAaAivNALl~l 196 (198)
T PF02570_consen 144 VRPALVI-------GVPVGFVGA-AESKEALMQSGVPYITVRGRKGGSPVAAAIVNALLYL 196 (198)
T ss_dssp -TTSEEE-------E---SSSSH-HHHHHHHHHSTS-EEEESSS---HHHHHHHHHHHHHH
T ss_pred CCCcEEE-------ECCCcccCc-HHHHHHHHhCCCCEEEEecCCCCHHHHHHHHHHHHHh
Confidence 6666653 456665533 333444444433333 8999999999999988764
No 430
>PLN02271 serine hydroxymethyltransferase
Probab=32.71 E-value=1e+02 Score=29.04 Aligned_cols=30 Identities=7% Similarity=0.089 Sum_probs=18.9
Q ss_pred HHHHHHhh---hhHHHHHHHHHHHHHHhhhhcC
Q psy6205 195 AVMEVLET---ENLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 195 a~l~~~~~---~~l~~~~~~~g~~l~~~l~~l~ 224 (224)
.+++.+.. ..+.+++-++.+.|.+.|.+.|
T Consensus 423 valkea~~~efk~Ya~QVv~NAkaLA~~L~~~G 455 (586)
T PLN02271 423 IALKQVATPEYKAYMQQVKKNAQALASALLRRK 455 (586)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 34554432 3577777777777777776654
No 431
>PRK08286 cbiC cobalt-precorrin-8X methylmutase; Validated
Probab=31.14 E-value=77 Score=25.83 Aligned_cols=46 Identities=28% Similarity=0.418 Sum_probs=29.7
Q ss_pred CcccccceecHHHHHhhhcCCcccc---cCCCCcHHHHHHHHHHHHHHhh
Q psy6205 156 GHPVAAVITTKEIAKSFQETGVEYF---NTYGGNPVSCAVANAVMEVLET 202 (224)
Q Consensus 156 G~p~~av~~~~~i~~~~~~~~~~~~---~T~~~~p~~~aaa~a~l~~~~~ 202 (224)
|+|+|-|-. .|-.+.+.+.+..+. ++-+|+|++.|+.++-+..+.+
T Consensus 164 G~PVGFV~A-aEsKe~L~~~~iP~It~~GrkGGS~vAaAivNALl~~~~~ 212 (214)
T PRK08286 164 GVPVGFVGA-AESKEALTESDLPAIAALGRKGGSNVAAAIVNAILYHLRE 212 (214)
T ss_pred EeCCccccH-HHHHHHHHhCCCCEEEEecCCCcHHHHHHHHHHHHHHhcc
Confidence 456665544 333344443333333 8999999999999998877643
No 432
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=30.46 E-value=78 Score=27.56 Aligned_cols=19 Identities=58% Similarity=1.216 Sum_probs=16.4
Q ss_pred CCCcceeeccCCceeEEEE
Q psy6205 3 RYPLIGDVRGIGLFVGVEL 21 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~giel 21 (224)
++|.+.++||.|++.++++
T Consensus 324 ~~~~~~~~~~~g~~~~i~~ 342 (396)
T PRK02627 324 KYPGIKEVRGLGLMIGIEL 342 (396)
T ss_pred hCCCeeeeccCcEEEEEEe
Confidence 3677789999999999998
No 433
>PRK04964 hypothetical protein; Provisional
Probab=30.08 E-value=1e+02 Score=19.89 Aligned_cols=34 Identities=12% Similarity=0.090 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhh
Q psy6205 187 PVSCAVANAVMEVL-ETENLREHALDVGNQLHTPK 220 (224)
Q Consensus 187 p~~~aaa~a~l~~~-~~~~l~~~~~~~g~~l~~~l 220 (224)
|-+...++.+|+.+ .++.|.+.+++...+--..|
T Consensus 24 P~Ai~ca~k~L~~IAad~~Lp~~vRe~AAfAAANL 58 (66)
T PRK04964 24 PDALGCVLKALNEIAADEALPESVREKAAYAAANL 58 (66)
T ss_pred cHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHH
Confidence 66777788999999 46788888888877654433
No 434
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=30.03 E-value=2.8e+02 Score=24.98 Aligned_cols=31 Identities=13% Similarity=0.129 Sum_probs=23.0
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH 120 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~ 120 (224)
++..+|++|-+....|.+.+-++..+.+++.
T Consensus 148 ~~TklV~~e~~~np~g~v~Di~~I~~la~~~ 178 (433)
T PRK08134 148 PNTRLLFGETLGNPGLEVLDIPTVAAIAHEA 178 (433)
T ss_pred CCCeEEEEECCCcccCcccCHHHHHHHHHHc
Confidence 3567899998766678888877777777766
No 435
>PRK05954 precorrin-8X methylmutase; Provisional
Probab=28.82 E-value=92 Score=25.18 Aligned_cols=44 Identities=30% Similarity=0.473 Sum_probs=27.9
Q ss_pred CcccccceecHHHHHhhhcCCcccc---cCCCCcHHHHHHHHHHHHHH
Q psy6205 156 GHPVAAVITTKEIAKSFQETGVEYF---NTYGGNPVSCAVANAVMEVL 200 (224)
Q Consensus 156 G~p~~av~~~~~i~~~~~~~~~~~~---~T~~~~p~~~aaa~a~l~~~ 200 (224)
|+|+|-|-. .|-.+.+.+.+..+. ++.+|+|++.|+.++-+...
T Consensus 153 g~PVGFV~A-~ESKe~L~~~~iP~It~~GrkGGS~vAaAivNALl~~~ 199 (203)
T PRK05954 153 GVPVGFVSV-VEAKQALAQLDVPQIRVEGRKGGSPVAAAIVNALLILA 199 (203)
T ss_pred EECCcccCH-HHHHHHHHhCCCCEEEEecCCCcHHHHHHHHHHHHHHh
Confidence 446665544 334444443333333 89999999999999988443
No 436
>PRK06264 cbiC precorrin-8X methylmutase; Validated
Probab=28.00 E-value=96 Score=25.21 Aligned_cols=46 Identities=24% Similarity=0.486 Sum_probs=29.8
Q ss_pred CcccccceecHHHHHhhhcCCccc---ccCCCCcHHHHHHHHHHHHHHhh
Q psy6205 156 GHPVAAVITTKEIAKSFQETGVEY---FNTYGGNPVSCAVANAVMEVLET 202 (224)
Q Consensus 156 G~p~~av~~~~~i~~~~~~~~~~~---~~T~~~~p~~~aaa~a~l~~~~~ 202 (224)
|+|+|-|-. .|-.+.+...+..+ -++-+|.|++.|+.++-|..-.+
T Consensus 159 g~PVGFV~A-~ESKe~L~~~~vP~It~~GrkGGS~vAaAivNALl~~~~~ 207 (210)
T PRK06264 159 GVPVGFVKA-AESKEALRNTNIPSISTIGPKGGTPVAVSIINGIIALSKN 207 (210)
T ss_pred EeCCccccH-HHHHHHHHhCCCCEEEEecCCCcHHHHHHHHHHHHHHhcc
Confidence 456665554 23334443333233 38999999999999998887654
No 437
>PF15391 DUF4614: Domain of unknown function (DUF4614)
Probab=27.33 E-value=3e+02 Score=21.84 Aligned_cols=69 Identities=16% Similarity=0.325 Sum_probs=43.4
Q ss_pred CCCchhcccccccCCc----ccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHH-HHH-hhhhHHHHHHHHHHH
Q psy6205 142 IIPDIVTVGKPMGNGH----PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVM-EVL-ETENLREHALDVGNQ 215 (224)
Q Consensus 142 v~pDi~~~~K~l~~G~----p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l-~~~-~~~~l~~~~~~~g~~ 215 (224)
..-++..+|=++||++ ||+--+++.+.++++... +|...|- ...| +.| ..++++++.+.+-.-
T Consensus 85 ~~~~~aaigp~lgg~yvdP~PIasHvVS~dAiEALTaY----------SPA~lAL-nDMLkQQL~LTqqFve~sr~LH~S 153 (181)
T PF15391_consen 85 KAAGMAAIGPALGGAYVDPTPIASHVVSADAIEALTAY----------SPAVLAL-NDMLKQQLSLTQQFVEASRHLHQS 153 (181)
T ss_pred cccCccccCcccCCceecCcCcchhccCHHHHHHHhcc----------ChHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456778888999873 899999999999887532 3332221 1111 111 245677777777777
Q ss_pred HHHhhh
Q psy6205 216 LHTPKK 221 (224)
Q Consensus 216 l~~~l~ 221 (224)
+.+-|+
T Consensus 154 ll~SL~ 159 (181)
T PF15391_consen 154 LLQSLD 159 (181)
T ss_pred HHHhcC
Confidence 666665
No 438
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=27.30 E-value=2.5e+02 Score=25.39 Aligned_cols=68 Identities=16% Similarity=0.196 Sum_probs=37.3
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchhc--ccccccC-Ccccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN-GHPVAAV 162 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~-G~p~~av 162 (224)
++.+|++|......|.+.+-+++.+.+++. |-.-+ -+|. ..-.-.+| .|+++ +-|-++| |--+|++
T Consensus 155 ~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~t~-a~g~-~~~p~~~G----aDivv~S~~K~l~G~gd~~gG~ 228 (437)
T PRK05613 155 NTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDNTI-ATAA-LVRPLELG----ADVVVASLTKFYTGNGSGLGGV 228 (437)
T ss_pred cCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEECCC-cccc-ccChHHhC----CCEEEeeccceecCCCcceeEE
Confidence 466888887665567777777777777766 11101 1121 11111234 58876 4688876 4334444
Q ss_pred ee
Q psy6205 163 IT 164 (224)
Q Consensus 163 ~~ 164 (224)
++
T Consensus 229 vv 230 (437)
T PRK05613 229 LI 230 (437)
T ss_pred EE
Confidence 44
No 439
>TIGR00703 conserved hypothetical protein. The function of this family is unknown. These proteins are from 222 to 233 residues in length, lack hydrophobic stretches, and are found so far only in thermophiles.
Probab=26.94 E-value=49 Score=26.37 Aligned_cols=23 Identities=43% Similarity=0.768 Sum_probs=16.8
Q ss_pred HHHHHHHHH-HHhCCccccccchhhhhcC
Q psy6205 112 NYLREVYKH-VQVGFGRVGTHWWAFQLQG 139 (224)
Q Consensus 112 ~~l~~~~~~-v~tG~GrtG~~~~~~~~~g 139 (224)
.|++.++++ -.||||| +++++||
T Consensus 163 rflr~~rkiek~tGFGR-----~~faYfG 186 (223)
T TIGR00703 163 RFLREAKKVEKLTGFGR-----FVFAYFG 186 (223)
T ss_pred HHHHHHHHHHHhcCcce-----eehhhhc
Confidence 567777776 7799986 4667777
No 440
>PRK14983 aldehyde decarbonylase; Provisional
Probab=26.85 E-value=37 Score=27.27 Aligned_cols=76 Identities=24% Similarity=0.312 Sum_probs=44.8
Q ss_pred CCceEEEEccccCC-------CCcccCCHHHHHHHHHH---HHhCCccccccchhhhhcCCCCCCchh-----------c
Q psy6205 90 KRPCAFFAESLQSC-------GGQIIPPANYLREVYKH---VQVGFGRVGTHWWAFQLQGDDIIPDIV-----------T 148 (224)
Q Consensus 90 ~~iaavi~Epv~~~-------~G~~~~~~~~l~~~~~~---v~tG~GrtG~~~~~~~~~g~~v~pDi~-----------~ 148 (224)
.+|-||+||.-|-. +-.++...+=|.+|.+. .+.||--.|+ +++ |+||+- -
T Consensus 22 SRINaIVIEGEqeA~dNyi~la~llP~~~dEL~rLakME~rH~kgF~aCGr------NL~--V~~Dm~fA~~fF~~Lh~n 93 (231)
T PRK14983 22 SRINAIVIEGEQEAHDNYISLATLLPEHAEELTRLAKMEMRHKKGFTACGR------NLG--VTPDMPFAKEFFSPLHGN 93 (231)
T ss_pred HHhceeeEeccHHHHHhHHHHHHHCcccHHHHHHHHHHHHHHHhHHHHHcc------cCc--CCCCcHHHHHHHHHHHHH
Confidence 37789999987643 12334444555555555 7777744443 455 999985 3
Q ss_pred ccccccCCcccccceecHHHHHhhh
Q psy6205 149 VGKPMGNGHPVAAVITTKEIAKSFQ 173 (224)
Q Consensus 149 ~~K~l~~G~p~~av~~~~~i~~~~~ 173 (224)
|-|++..|=-..+.+...-+.+.|.
T Consensus 94 Fq~A~~egkv~TCLlIQaLiIE~FA 118 (231)
T PRK14983 94 FQKAAAEGKVVTCLLIQALIIEAFA 118 (231)
T ss_pred HHHHHhcCCeeehHHHHHHHHHHHH
Confidence 4556666633344455555666654
No 441
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=26.10 E-value=4.8e+02 Score=23.34 Aligned_cols=137 Identities=13% Similarity=0.138 Sum_probs=74.7
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
+++||+.+. ++.....+++-|- .-.| .+-.++.|+++.++ |-.=+=-+|...+.+.. +
T Consensus 147 ~~~LE~~~~----~~~vkl~iLCnPH-NP~G-rvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~----l 216 (388)
T COG1168 147 FDALEKAFV----DERVKLFILCNPH-NPTG-RVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFAS----L 216 (388)
T ss_pred HHHHHHHHh----cCCccEEEEeCCC-CCCC-ccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhh----c
Confidence 566666664 2222345666662 2223 57889999999999 11111112210112111 3
Q ss_pred CCc-----hhcc--ccccc-CCccccccee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHH
Q psy6205 143 IPD-----IVTV--GKPMG-NGHPVAAVIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALD 211 (224)
Q Consensus 143 ~pD-----i~~~--~K~l~-~G~p~~av~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~ 211 (224)
.|+ |+++ +|+.. .|+-.|.++. ++++.+.+... ..-.+..+-|.+++-|..++.+.=++ +.+.+-+++
T Consensus 217 s~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~-l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~ 295 (388)
T COG1168 217 SERFADNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKR-LKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKD 295 (388)
T ss_pred ChhhhcceEEEeeccccccchhhhheeEEecCHHHHHHHHHH-HHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 333 3333 68886 5776665555 55554555432 11224556678888888888765433 346666667
Q ss_pred HHHHHHHhhhh
Q psy6205 212 VGNQLHTPKKE 222 (224)
Q Consensus 212 ~g~~l~~~l~~ 222 (224)
+=+++.+.|++
T Consensus 296 N~~~~~~~l~~ 306 (388)
T COG1168 296 NRDYVADFLNK 306 (388)
T ss_pred HHHHHHHHHHh
Confidence 77777666654
No 442
>KOG3671|consensus
Probab=24.69 E-value=31 Score=31.67 Aligned_cols=53 Identities=19% Similarity=0.344 Sum_probs=41.0
Q ss_pred ceecHHHHHhhhcC-CcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q psy6205 162 VITTKEIAKSFQET-GVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQL 216 (224)
Q Consensus 162 v~~~~~i~~~~~~~-~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l 216 (224)
++-..|+++.|... .+.|+|||.|+ -|-+++--.++.|...++++|++.+.+=
T Consensus 89 liWdqELY~nf~y~q~r~ffhtFegd--dc~aGLnF~~E~EA~~F~k~V~~r~~~~ 142 (569)
T KOG3671|consen 89 LIWDQELYQNFEYRQPRTFFHTFEGD--DCQAGLNFASEEEAQKFRKKVQDRICHR 142 (569)
T ss_pred eeehHHhhhhceeccCccceeeeccc--cceeeecccCHHHHHHHHHHHHHHhhhh
Confidence 57788888888643 46889999986 4677777777777788999998887765
No 443
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=24.59 E-value=1.3e+02 Score=26.39 Aligned_cols=20 Identities=40% Similarity=0.956 Sum_probs=16.5
Q ss_pred CCcceeeccCCceeEEEEee
Q psy6205 4 YPLIGDVRGIGLFVGVELVT 23 (224)
Q Consensus 4 ~p~v~~vRg~Gl~~gielv~ 23 (224)
++.+.++||.|++.++++..
T Consensus 327 ~~~~~~~~~~G~~~~~~l~~ 346 (403)
T PRK05093 327 YGVFSEIRGMGLLIGAELKP 346 (403)
T ss_pred CCCeEeEeeCceEEEEEecC
Confidence 45567999999999999853
No 444
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2.7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....
Probab=24.54 E-value=1.4e+02 Score=24.44 Aligned_cols=27 Identities=7% Similarity=0.203 Sum_probs=20.2
Q ss_pred EEEEccccC-CCCcccCCHHHHHHHHHH
Q psy6205 94 AFFAESLQS-CGGQIIPPANYLREVYKH 120 (224)
Q Consensus 94 avi~Epv~~-~~G~~~~~~~~l~~~~~~ 120 (224)
-+|+|||.+ .+|.....+++++.+++.
T Consensus 88 ~vV~DPVm~~~~g~~~~~~~~~~~~~~~ 115 (246)
T PF08543_consen 88 PVVLDPVMGDSGGYYYVDPDVVEAMREE 115 (246)
T ss_dssp EEEEE---EETTTECTSSHHHHHHHHHH
T ss_pred CEEEecccccCCCCcCCCHHHHHHHHhc
Confidence 799999998 577777889999999984
No 445
>PF06418 CTP_synth_N: CTP synthase N-terminus; InterPro: IPR017456 CTP synthase is involved in pyrimidine ribonucleotide/ribonucleoside metabolism, catalysing the synthesis of CTP from UTP by amination of the pyrimidine ring at the 4-position []. The enzyme exists as a dimer of identical chains that aggregates as a tetramer. This gene has been found roughly 500 bp upstream of enolase in both beta (Nitrosomonas europaea) and gamma (Escherichia coli) subdivisions of Proteobacterium [].; GO: 0003883 CTP synthase activity, 0006221 pyrimidine nucleotide biosynthetic process; PDB: 2VO1_A 3NVA_B 1VCN_A 1VCO_A 1VCM_A 3IHL_B 2AD5_A 1S1M_B.
Probab=24.45 E-value=1.3e+02 Score=25.56 Aligned_cols=45 Identities=13% Similarity=0.318 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH
Q psy6205 73 KYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH 120 (224)
Q Consensus 73 ~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~ 120 (224)
...|++++.+....+. .+.-.+|+| +-|.-|++. .--|++.+|++
T Consensus 116 HitdeIk~~I~~~a~~-~~~Dv~iiE-iGGTVGDIE-s~pFlEAirQl 160 (276)
T PF06418_consen 116 HITDEIKERIRRVAKK-PEPDVVIIE-IGGTVGDIE-SLPFLEAIRQL 160 (276)
T ss_dssp HHHHHHHHHHHHHHCC-CT-SEEEEE-EESETTSCC-CHHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCC-CCCCEEEEe-cCCcccccc-cccHHHHHHHH
Confidence 4567788777765432 234457777 555556654 44599999999
No 446
>PRK04205 hypothetical protein; Provisional
Probab=23.42 E-value=72 Score=25.56 Aligned_cols=23 Identities=48% Similarity=0.868 Sum_probs=16.6
Q ss_pred HHHHHHHHH-HHhCCccccccchhhhhcC
Q psy6205 112 NYLREVYKH-VQVGFGRVGTHWWAFQLQG 139 (224)
Q Consensus 112 ~~l~~~~~~-v~tG~GrtG~~~~~~~~~g 139 (224)
.|++.+|++ -.||||| +++++||
T Consensus 169 RflR~~rkieketGFGR-----~~faYfG 192 (229)
T PRK04205 169 RFLREVRKVEKETGFGR-----FVFAYFG 192 (229)
T ss_pred HHHHHHHHHHHhcCcce-----eehhhhc
Confidence 567777777 5599986 4667777
No 447
>COG1851 Uncharacterized conserved protein [Function unknown]
Probab=23.15 E-value=58 Score=25.86 Aligned_cols=23 Identities=43% Similarity=0.768 Sum_probs=15.9
Q ss_pred HHHHHHHHH-HHhCCccccccchhhhhcC
Q psy6205 112 NYLREVYKH-VQVGFGRVGTHWWAFQLQG 139 (224)
Q Consensus 112 ~~l~~~~~~-v~tG~GrtG~~~~~~~~~g 139 (224)
.|++.++++ -.||||| +++++||
T Consensus 169 rflr~akkvek~tGFGR-----~~faYfG 192 (229)
T COG1851 169 RFLREAKKVEKLTGFGR-----FVFAYFG 192 (229)
T ss_pred HHHHHHHHHHHhcCcee-----eeeehhc
Confidence 466666666 7899986 4566776
No 448
>PRK05953 precorrin-8X methylmutase; Validated
Probab=23.07 E-value=1.4e+02 Score=24.27 Aligned_cols=41 Identities=17% Similarity=0.280 Sum_probs=27.0
Q ss_pred CcccccceecHHHHHhhhcCCccc---ccCCCCcHHHHHHHHHHH
Q psy6205 156 GHPVAAVITTKEIAKSFQETGVEY---FNTYGGNPVSCAVANAVM 197 (224)
Q Consensus 156 G~p~~av~~~~~i~~~~~~~~~~~---~~T~~~~p~~~aaa~a~l 197 (224)
|+|+|-|-. .|-.+.+.+.+..+ .++.+|+|++.|+.+|-|
T Consensus 151 G~PVGFV~A-aESKe~L~~~~vP~It~~GrkGGS~vAaA~vNALl 194 (208)
T PRK05953 151 ATPAGFIDA-DDAKERLQDSLVPHITIDGRKGGAVVAVAIIDGLV 194 (208)
T ss_pred EeCCcccCc-HHHHHHHHhCCCCEEEEeCCCCcHHHHHHHHHHHH
Confidence 456665554 33344444333233 389999999999999988
No 449
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=21.54 E-value=4.4e+02 Score=23.35 Aligned_cols=76 Identities=17% Similarity=0.267 Sum_probs=48.7
Q ss_pred chhccc--ccccC-CcccccceecHHHHHhhhcC--C--------cccccCCCCcHH-HHHHHHHHHHHHhhh----hHH
Q psy6205 145 DIVTVG--KPMGN-GHPVAAVITTKEIAKSFQET--G--------VEYFNTYGGNPV-SCAVANAVMEVLETE----NLR 206 (224)
Q Consensus 145 Di~~~~--K~l~~-G~p~~av~~~~~i~~~~~~~--~--------~~~~~T~~~~p~-~~aaa~a~l~~~~~~----~l~ 206 (224)
|++.+| |-||+ | +..++.|+++.+...+. . ....+||+-.|+ +.....-+++.+.+. .+.
T Consensus 192 dviyagaQKnlGpaG--ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~ 269 (365)
T COG1932 192 DVIYAGAQKNLGPAG--LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALE 269 (365)
T ss_pred ceEEEehhhccCccc--eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 344443 78875 6 67799999998877442 0 112367776666 344556778888764 456
Q ss_pred HHHHHHHHHHHHhhhh
Q psy6205 207 EHALDVGNQLHTPKKE 222 (224)
Q Consensus 207 ~~~~~~g~~l~~~l~~ 222 (224)
++-++..+.|.+.+.+
T Consensus 270 ~rn~~ka~~LY~~id~ 285 (365)
T COG1932 270 ARNQAKAQLLYDWIDK 285 (365)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 6667777777666543
No 450
>KOG1405|consensus
Probab=21.43 E-value=82 Score=28.00 Aligned_cols=21 Identities=33% Similarity=0.718 Sum_probs=17.0
Q ss_pred CCCc-ceeeccCCceeEEEEee
Q psy6205 3 RYPL-IGDVRGIGLFVGVELVT 23 (224)
Q Consensus 3 ~~p~-v~~vRg~Gl~~gielv~ 23 (224)
+||. +-++||+|.|.+.++-+
T Consensus 410 ~~p~~~~~~RGrGTF~a~d~ps 431 (484)
T KOG1405|consen 410 KYPGKINNLRGRGTFIAWDCPS 431 (484)
T ss_pred hCchhhhcccccceEEEEeCCC
Confidence 4774 56999999999999854
No 451
>KOG0634|consensus
Probab=21.06 E-value=2.7e+02 Score=25.36 Aligned_cols=65 Identities=12% Similarity=0.095 Sum_probs=45.5
Q ss_pred hcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q psy6205 147 VTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVG 213 (224)
Q Consensus 147 ~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g 213 (224)
-+|||-++-|+-+|.+.+.+-+.+..-.. .-..|-+-+-++-....+.|+..-++++++.+.++-
T Consensus 291 dSFSKiiaPGlRlG~it~~~~~l~ril~~--ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~ 355 (472)
T KOG0634|consen 291 DSFSKIIAPGLRLGWITGNSLFLKRILDL--AEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLR 355 (472)
T ss_pred cchhhhhcCcceeEEeecCHHHHHHHhhh--cceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 37999999999999999999777665432 222444445566677778888887776666655543
No 452
>PRK09265 aminotransferase AlaT; Validated
Probab=20.61 E-value=1.4e+02 Score=26.21 Aligned_cols=48 Identities=10% Similarity=0.051 Sum_probs=28.5
Q ss_pred ccccccc-CCccccccee--cHH----HHHhhhcCCcccccCCCCcHHHHHHHHHHHH
Q psy6205 148 TVGKPMG-NGHPVAAVIT--TKE----IAKSFQETGVEYFNTYGGNPVSCAVANAVME 198 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~--~~~----i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~ 198 (224)
+|+|.++ .|+-+|.++. +++ +.+.+.. ....++..|.++-.++.+.|+
T Consensus 237 S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~q~~~~~~l~ 291 (404)
T PRK09265 237 GLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDM---LASMRLCANVPAQHAIQTALG 291 (404)
T ss_pred cchhhccCcccceEEEEEeCchHHHHHHHHHHHH---HhccccCCCcHHHHHHHHHhc
Confidence 4799996 5898999985 343 3332221 111245566667666666664
No 453
>KOG3846|consensus
Probab=20.41 E-value=3.4e+02 Score=23.82 Aligned_cols=40 Identities=10% Similarity=0.044 Sum_probs=25.2
Q ss_pred cCCCCcHH-HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 181 NTYGGNPV-SCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 181 ~T~~~~p~-~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
+-.+..|+ -.++-++.|+++..-+ ++++++.+-+|...|+
T Consensus 329 fRiSNPpi~~v~al~~SLe~F~q~~-~~~lRkrS~lLTgYle 369 (465)
T KOG3846|consen 329 FRISNPPIIDVVALRSSLELFAQFN-INELRKRSLLLTGYLE 369 (465)
T ss_pred cccCCCcHhHHHHHHhhHHHHHHhh-HHHHhhhhhhHHhHHH
Confidence 44555666 4455567888886555 6677777766655554
No 454
>PF03685 UPF0147: Uncharacterised protein family (UPF0147); InterPro: IPR005354 The proteins in this entry are functionally uncharacterised.; PDB: 2QZG_C 2QSB_A.
Probab=20.22 E-value=1.9e+02 Score=19.89 Aligned_cols=36 Identities=14% Similarity=0.192 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHH-hhhhHHHHHHHHHHHHHHhhhh
Q psy6205 187 PVSCAVANAVMEVL-ETENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 187 p~~~aaa~a~l~~~-~~~~l~~~~~~~g~~l~~~l~~ 222 (224)
-+-+|.|...||.+ .+++...+.+..--.+...|+.
T Consensus 47 ~vRaataIs~LdeIsnDPNmP~h~RT~IW~i~S~LEt 83 (85)
T PF03685_consen 47 GVRAATAISILDEISNDPNMPSHTRTLIWNIVSKLET 83 (85)
T ss_dssp HHHHHHHHHHHHHHCT-TTS-HHHHHHHHHHHHHHCC
T ss_pred hHhHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHh
Confidence 47788888899999 5789999999888877777764
No 455
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=20.17 E-value=6.4e+02 Score=22.63 Aligned_cols=76 Identities=21% Similarity=0.285 Sum_probs=42.0
Q ss_pred ccccccc--CC-c-ccccceecHHHHHhhhcCC-cccccCCCCcHH-HHHHHHHHHH--HH----h-h-hhHHHHHHHHH
Q psy6205 148 TVGKPMG--NG-H-PVAAVITTKEIAKSFQETG-VEYFNTYGGNPV-SCAVANAVME--VL----E-T-ENLREHALDVG 213 (224)
Q Consensus 148 ~~~K~l~--~G-~-p~~av~~~~~i~~~~~~~~-~~~~~T~~~~p~-~~aaa~a~l~--~~----~-~-~~l~~~~~~~g 213 (224)
.+||.+| |= . .++++.-+++..+.+.+.- ...-.+|+.+|- +++....+|+ .| + | +...+++.++-
T Consensus 243 S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR 322 (396)
T COG1448 243 SFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQRILEMR 322 (396)
T ss_pred hhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3799998 21 1 3466777777776665331 112267776665 3333333332 11 1 1 34566677777
Q ss_pred HHHHHhhhhc
Q psy6205 214 NQLHTPKKEN 223 (224)
Q Consensus 214 ~~l~~~l~~l 223 (224)
+.|.+.|++.
T Consensus 323 ~~lv~~L~~~ 332 (396)
T COG1448 323 QALVDALKAL 332 (396)
T ss_pred HHHHHHHHhh
Confidence 7777777653
No 456
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=20.11 E-value=2.1e+02 Score=23.79 Aligned_cols=34 Identities=18% Similarity=0.237 Sum_probs=27.0
Q ss_pred cCCCCceEEEEccccCCCC--cccCCHHHHHHHHHH
Q psy6205 87 RNGKRPCAFFAESLQSCGG--QIIPPANYLREVYKH 120 (224)
Q Consensus 87 ~~~~~iaavi~Epv~~~~G--~~~~~~~~l~~~~~~ 120 (224)
.+++-.--+||-|--|-|. .-.|...|...+.++
T Consensus 27 ~~p~~~f~vIiNP~sGPG~~~~~~pd~~Y~~~i~~L 62 (253)
T PF12138_consen 27 AHPSVPFTVIINPNSGPGSAPDPWPDANYAAAIPRL 62 (253)
T ss_pred cCCCCcEEEEEcCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 4777778999999776653 345899999999999
Done!