Query psy6205
Match_columns 224
No_of_seqs 287 out of 1930
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 20:25:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6205.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6205hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e3q_A Pyruvate transaminase; 100.0 3.8E-42 1.3E-46 308.6 17.1 178 39-223 188-383 (473)
2 4atq_A 4-aminobutyrate transam 100.0 1.7E-41 6E-46 303.1 16.2 170 42-223 184-365 (456)
3 4ao9_A Beta-phenylalanine amin 100.0 8.5E-37 2.9E-41 272.3 10.8 197 18-223 142-361 (454)
4 4a0g_A Adenosylmethionine-8-am 100.0 5.9E-34 2E-38 270.3 4.5 146 70-218 571-736 (831)
5 3i5t_A Aminotransferase; pyrid 100.0 6.3E-32 2.1E-36 242.6 17.3 175 40-223 176-369 (476)
6 3hmu_A Aminotransferase, class 100.0 1.5E-31 5.2E-36 239.9 16.2 173 43-223 180-366 (472)
7 3gju_A Putative aminotransfera 100.0 9.7E-29 3.3E-33 220.4 17.8 176 40-222 174-367 (460)
8 3n5m_A Adenosylmethionine-8-am 100.0 1.4E-28 4.8E-33 218.6 16.9 174 41-223 170-361 (452)
9 4ffc_A 4-aminobutyrate aminotr 100.0 1.2E-28 4.2E-33 219.7 15.5 167 44-223 186-364 (453)
10 3oks_A 4-aminobutyrate transam 100.0 1.8E-28 6.1E-33 218.4 15.1 169 46-223 185-366 (451)
11 4a6r_A Omega transaminase; tra 100.0 1.2E-28 4.1E-33 219.8 13.4 175 41-223 174-364 (459)
12 3dod_A Adenosylmethionine-8-am 100.0 4.8E-28 1.7E-32 215.1 15.8 171 42-222 168-357 (448)
13 3tfu_A Adenosylmethionine-8-am 100.0 5.5E-28 1.9E-32 215.9 14.0 144 74-223 219-379 (457)
14 1zod_A DGD, 2,2-dialkylglycine 99.9 1.9E-24 6.4E-29 190.6 15.1 170 46-223 163-344 (433)
15 3a8u_X Omega-amino acid--pyruv 99.9 4.7E-24 1.6E-28 189.1 17.7 172 45-223 177-368 (449)
16 1z7d_A Ornithine aminotransfer 99.9 1.5E-24 5.3E-29 192.1 13.8 129 90-223 211-352 (433)
17 2oat_A Ornithine aminotransfer 99.9 2E-24 6.7E-29 191.8 13.7 129 90-223 222-363 (439)
18 2yky_A Beta-transaminase; tran 99.9 1.6E-26 5.3E-31 206.9 0.0 142 77-223 219-375 (465)
19 3i4j_A Aminotransferase, class 99.9 4.8E-24 1.7E-28 187.9 15.6 146 73-223 174-336 (430)
20 3l44_A Glutamate-1-semialdehyd 99.9 2.4E-24 8.1E-29 190.1 12.7 142 75-223 189-343 (434)
21 4e77_A Glutamate-1-semialdehyd 99.9 6.3E-24 2.1E-28 187.3 14.2 142 75-223 187-341 (429)
22 2epj_A Glutamate-1-semialdehyd 99.9 1.2E-23 4.1E-28 185.7 13.4 142 75-223 190-344 (434)
23 2e7u_A Glutamate-1-semialdehyd 99.9 2.6E-23 9E-28 183.0 13.3 142 75-223 186-340 (424)
24 3k28_A Glutamate-1-semialdehyd 99.9 1.9E-23 6.7E-28 184.2 12.0 141 75-223 187-340 (429)
25 3fq8_A Glutamate-1-semialdehyd 99.9 5.1E-23 1.8E-27 181.2 14.4 142 75-223 186-340 (427)
26 3dxv_A Alpha-amino-epsilon-cap 99.9 5.4E-23 1.9E-27 181.6 14.2 142 74-223 186-339 (439)
27 1ohv_A 4-aminobutyrate aminotr 99.9 4.6E-23 1.6E-27 184.7 13.5 139 74-223 241-394 (472)
28 2cjg_A L-lysine-epsilon aminot 99.9 7.3E-23 2.5E-27 182.1 13.5 142 72-223 215-371 (449)
29 2pb2_A Acetylornithine/succiny 99.9 2.1E-22 7.1E-27 177.5 10.6 129 90-223 200-340 (420)
30 3nx3_A Acoat, acetylornithine 99.9 3.5E-22 1.2E-26 173.9 11.9 129 90-223 178-319 (395)
31 2cy8_A D-phgat, D-phenylglycin 99.9 1.8E-22 6.3E-27 179.2 10.1 141 75-223 188-344 (453)
32 2eo5_A 419AA long hypothetical 99.9 5.7E-21 1.9E-25 168.1 15.7 140 74-223 195-348 (419)
33 1s0a_A Adenosylmethionine-8-am 99.8 8.9E-21 3E-25 167.0 13.7 143 75-223 191-350 (429)
34 1sff_A 4-aminobutyrate aminotr 99.8 5.2E-19 1.8E-23 155.0 13.8 144 74-223 183-338 (426)
35 3ruy_A Ornithine aminotransfer 99.8 9.1E-19 3.1E-23 152.0 13.5 129 90-223 181-322 (392)
36 4adb_A Succinylornithine trans 99.8 1.4E-18 4.8E-23 151.2 11.1 129 90-223 182-322 (406)
37 1vef_A Acetylornithine/acetyl- 99.7 1E-16 3.5E-21 139.1 12.1 129 90-223 184-324 (395)
38 2ord_A Acoat, acetylornithine 99.7 1.3E-16 4.5E-21 138.7 9.8 128 90-223 182-321 (397)
39 2eh6_A Acoat, acetylornithine 99.6 1.5E-15 5.3E-20 130.6 11.7 127 90-223 171-309 (375)
40 3l8a_A METC, putative aminotra 99.4 3E-13 1E-17 118.5 10.6 139 75-222 183-342 (421)
41 2w8t_A SPT, serine palmitoyltr 99.4 6.1E-13 2.1E-17 117.0 10.0 140 75-223 180-335 (427)
42 3kki_A CAI-1 autoinducer synth 99.3 1.1E-11 3.7E-16 108.0 9.6 139 75-224 175-328 (409)
43 3tqx_A 2-amino-3-ketobutyrate 99.2 4.1E-11 1.4E-15 103.4 11.3 143 76-223 160-318 (399)
44 1fc4_A 2-amino-3-ketobutyrate 99.2 1.7E-10 5.7E-15 99.9 12.0 144 75-223 161-319 (401)
45 3op7_A Aminotransferase class 99.1 4.5E-10 1.5E-14 96.3 11.0 127 90-222 153-294 (375)
46 1bs0_A Protein (8-amino-7-oxon 99.1 8E-10 2.7E-14 95.1 11.7 140 75-223 155-309 (384)
47 1yiz_A Kynurenine aminotransfe 99.0 4.4E-10 1.5E-14 98.3 8.7 129 90-223 181-335 (429)
48 2bwn_A 5-aminolevulinate synth 99.0 2.2E-09 7.4E-14 92.9 11.7 140 75-223 164-321 (401)
49 3piu_A 1-aminocyclopropane-1-c 99.0 2.2E-09 7.6E-14 94.1 10.7 144 75-223 175-348 (435)
50 1v2d_A Glutamine aminotransfer 99.0 9E-10 3.1E-14 94.7 7.2 128 90-223 151-297 (381)
51 3dzz_A Putative pyridoxal 5'-p 98.9 3.1E-09 1.1E-13 91.2 9.1 140 75-222 149-308 (391)
52 3fdb_A Beta C-S lyase, putativ 98.9 2.9E-09 9.9E-14 91.1 8.5 137 75-222 140-296 (377)
53 3e2y_A Kynurenine-oxoglutarate 98.9 4.4E-09 1.5E-13 91.1 8.9 131 90-223 166-320 (410)
54 3b46_A Aminotransferase BNA3; 98.9 3.7E-09 1.3E-13 93.3 8.5 129 90-223 200-350 (447)
55 2o0r_A RV0858C (N-succinyldiam 98.9 2.7E-09 9.3E-14 92.8 7.5 130 91-223 160-306 (411)
56 1iay_A ACC synthase 2, 1-amino 98.9 1.1E-08 3.9E-13 89.3 11.3 144 75-223 172-343 (428)
57 1u08_A Hypothetical aminotrans 98.9 4.9E-09 1.7E-13 90.3 8.7 129 90-223 162-309 (386)
58 3a2b_A Serine palmitoyltransfe 98.9 1.7E-08 5.7E-13 87.3 11.9 139 75-223 159-314 (398)
59 3fvs_A Kynurenine--oxoglutarat 98.9 5.8E-09 2E-13 90.7 9.0 131 90-223 173-327 (422)
60 2x5d_A Probable aminotransfera 98.9 8E-09 2.7E-13 89.8 9.6 130 91-223 172-318 (412)
61 1gd9_A Aspartate aminotransfer 98.9 8.2E-09 2.8E-13 88.8 9.4 129 91-223 160-308 (389)
62 3ke3_A Putative serine-pyruvat 98.8 3.4E-08 1.2E-12 85.2 13.0 137 75-224 124-295 (379)
63 1j32_A Aspartate aminotransfer 98.8 8.5E-09 2.9E-13 88.7 9.0 128 91-223 163-310 (388)
64 1ajs_A Aspartate aminotransfer 98.8 6.9E-09 2.4E-13 90.1 8.5 142 75-223 170-344 (412)
65 2zc0_A Alanine glyoxylate tran 98.8 7.1E-08 2.4E-12 83.4 13.8 145 75-222 158-321 (407)
66 2z61_A Probable aspartate amin 98.8 7.2E-09 2.5E-13 88.7 7.3 128 91-223 154-296 (370)
67 3cq5_A Histidinol-phosphate am 98.8 4.2E-08 1.4E-12 84.0 12.0 137 75-223 153-301 (369)
68 3kax_A Aminotransferase, class 98.8 1.1E-08 3.8E-13 87.6 8.0 131 90-222 155-304 (383)
69 1d2f_A MALY protein; aminotran 98.8 3.3E-08 1.1E-12 85.1 10.3 136 75-222 151-308 (390)
70 3kgw_A Alanine-glyoxylate amin 98.8 9.6E-08 3.3E-12 81.7 12.9 136 75-223 137-306 (393)
71 3ffh_A Histidinol-phosphate am 98.8 2.8E-08 9.6E-13 84.7 9.4 124 90-222 154-294 (363)
72 3nra_A Aspartate aminotransfer 98.7 9.6E-09 3.3E-13 88.7 6.2 140 75-223 169-326 (407)
73 1c7n_A Cystalysin; transferase 98.7 5E-08 1.7E-12 84.2 10.2 140 75-222 153-312 (399)
74 4dq6_A Putative pyridoxal phos 98.7 2.1E-08 7.2E-13 86.0 7.8 129 92-222 165-312 (391)
75 1o4s_A Aspartate aminotransfer 98.7 1.9E-08 6.5E-13 86.9 6.9 127 91-223 174-316 (389)
76 2o1b_A Aminotransferase, class 98.7 1.7E-08 5.9E-13 87.7 6.6 128 91-223 181-326 (404)
77 2r2n_A Kynurenine/alpha-aminoa 98.7 1.2E-07 4.3E-12 82.8 11.9 128 90-222 189-339 (425)
78 1vp4_A Aminotransferase, putat 98.7 4.8E-08 1.6E-12 85.4 9.2 145 75-222 169-333 (425)
79 2e7j_A SEP-tRNA:Cys-tRNA synth 98.7 4.6E-08 1.6E-12 83.3 8.7 139 75-223 132-288 (371)
80 3dyd_A Tyrosine aminotransfera 98.7 7.3E-08 2.5E-12 84.4 10.1 127 91-223 191-343 (427)
81 1vjo_A Alanine--glyoxylate ami 98.7 3.1E-07 1.1E-11 78.9 13.5 136 75-223 148-314 (393)
82 2dou_A Probable N-succinyldiam 98.7 1.5E-08 5.2E-13 86.8 5.0 129 91-222 158-302 (376)
83 3aow_A Putative uncharacterize 98.7 1.1E-07 3.9E-12 84.0 10.6 143 75-222 200-362 (448)
84 1fg7_A Histidinol phosphate am 98.6 1.2E-07 4.2E-12 80.9 9.9 125 91-223 146-286 (356)
85 2zyj_A Alpha-aminodipate amino 98.6 9.5E-08 3.2E-12 82.5 9.2 140 75-222 151-310 (397)
86 3h14_A Aminotransferase, class 98.6 9.4E-08 3.2E-12 82.3 8.8 128 91-223 161-302 (391)
87 2ay1_A Aroat, aromatic amino a 98.6 3.5E-08 1.2E-12 85.0 6.0 143 75-223 156-329 (394)
88 2gb3_A Aspartate aminotransfer 98.6 1.1E-07 3.6E-12 82.7 8.8 125 91-223 174-317 (409)
89 1xi9_A Putative transaminase; 98.6 1.1E-07 3.8E-12 82.4 8.7 127 91-223 174-323 (406)
90 2dr1_A PH1308 protein, 386AA l 98.6 3.4E-07 1.2E-11 78.2 11.5 137 75-223 134-300 (386)
91 3nnk_A Ureidoglycine-glyoxylat 98.6 7.1E-07 2.4E-11 76.9 13.2 136 75-223 127-309 (411)
92 3euc_A Histidinol-phosphate am 98.6 6.3E-07 2.2E-11 76.3 12.7 136 75-223 146-296 (367)
93 3qgu_A LL-diaminopimelate amin 98.6 6.8E-08 2.3E-12 84.9 6.8 131 90-223 208-364 (449)
94 3ezs_A Aminotransferase ASPB; 98.5 2.2E-07 7.5E-12 79.4 8.8 124 91-220 154-300 (376)
95 3asa_A LL-diaminopimelate amin 98.5 2.2E-07 7.4E-12 80.5 8.8 129 90-223 162-315 (400)
96 3b1d_A Betac-S lyase; HET: PLP 97.9 9.8E-09 3.3E-13 88.7 0.0 127 91-222 164-312 (392)
97 1lc5_A COBD, L-threonine-O-3-p 98.5 4.2E-07 1.4E-11 77.5 10.2 125 91-223 146-287 (364)
98 3jtx_A Aminotransferase; NP_28 98.5 1.2E-07 4.1E-12 81.6 6.5 127 91-222 168-316 (396)
99 3g0t_A Putative aminotransfera 98.5 6.7E-07 2.3E-11 78.0 10.7 138 75-223 171-354 (437)
100 2q7w_A Aspartate aminotransfer 98.5 1.9E-07 6.6E-12 80.3 7.1 139 75-223 159-332 (396)
101 2dkj_A Serine hydroxymethyltra 98.5 6.9E-07 2.4E-11 77.0 10.5 133 75-223 152-300 (407)
102 1cs1_A CGS, protein (cystathio 98.5 4.7E-07 1.6E-11 78.0 9.4 125 75-216 127-266 (386)
103 2x5f_A Aspartate_tyrosine_phen 98.5 8.1E-07 2.8E-11 77.5 10.7 138 75-221 176-352 (430)
104 3f0h_A Aminotransferase; RER07 98.5 7.9E-07 2.7E-11 75.8 10.3 128 90-223 143-297 (376)
105 3ly1_A Putative histidinol-pho 98.5 6.6E-07 2.2E-11 75.7 9.6 138 75-223 129-283 (354)
106 2yrr_A Aminotransferase, class 98.5 1.9E-06 6.5E-11 72.4 12.4 136 75-223 113-274 (353)
107 1m32_A 2-aminoethylphosphonate 98.5 2.1E-06 7.3E-11 72.4 12.5 137 75-223 119-285 (366)
108 3f9t_A TDC, L-tyrosine decarbo 98.5 1E-06 3.6E-11 75.1 10.6 141 75-223 160-328 (397)
109 2vi8_A Serine hydroxymethyltra 98.4 1.2E-06 4.3E-11 75.3 11.0 132 75-223 152-299 (405)
110 3hdo_A Histidinol-phosphate am 98.4 6.8E-07 2.3E-11 76.1 9.2 124 93-223 151-284 (360)
111 1qz9_A Kynureninase; kynurenin 98.4 6.4E-07 2.2E-11 77.5 8.7 126 90-223 164-324 (416)
112 3lvm_A Cysteine desulfurase; s 98.4 6E-07 2E-11 77.9 8.4 125 90-223 162-303 (423)
113 1elu_A L-cysteine/L-cystine C- 98.4 9.3E-07 3.2E-11 75.5 9.5 126 90-223 153-316 (390)
114 3ftb_A Histidinol-phosphate am 98.4 1.2E-06 4E-11 74.3 9.5 124 92-223 145-286 (361)
115 3qhx_A Cystathionine gamma-syn 98.4 9.9E-07 3.4E-11 76.6 8.8 119 90-221 150-281 (392)
116 3zrp_A Serine-pyruvate aminotr 98.3 4.7E-06 1.6E-10 70.8 11.8 136 75-223 116-285 (384)
117 3isl_A Purine catabolism prote 98.3 7.5E-06 2.6E-10 70.5 12.7 136 75-223 125-309 (416)
118 1t3i_A Probable cysteine desul 98.3 4.1E-06 1.4E-10 72.2 10.7 125 90-223 168-324 (420)
119 1ax4_A Tryptophanase; tryptoph 98.3 6.5E-06 2.2E-10 72.4 12.1 141 75-222 169-341 (467)
120 2z9v_A Aspartate aminotransfer 98.3 8.5E-06 2.9E-10 69.7 12.5 137 75-223 122-289 (392)
121 3nmy_A Xometc, cystathionine g 98.3 1.3E-06 4.4E-11 76.3 7.1 121 90-221 151-283 (400)
122 1kmj_A Selenocysteine lyase; p 98.3 3.7E-06 1.3E-10 72.1 9.4 125 90-223 163-320 (406)
123 3mad_A Sphingosine-1-phosphate 98.2 3.2E-06 1.1E-10 75.8 9.0 132 90-223 238-396 (514)
124 1bw0_A TAT, protein (tyrosine 98.2 2.5E-06 8.4E-11 73.9 7.7 128 92-223 179-332 (416)
125 2ez2_A Beta-tyrosinase, tyrosi 98.2 1E-05 3.5E-10 71.0 11.5 141 75-223 160-332 (456)
126 2rfv_A Methionine gamma-lyase; 98.2 5.1E-06 1.8E-10 71.8 9.0 117 90-217 148-280 (398)
127 1gc0_A Methionine gamma-lyase; 98.2 2.7E-06 9.3E-11 73.7 7.1 120 90-218 149-282 (398)
128 3t18_A Aminotransferase class 98.2 4.2E-06 1.4E-10 72.5 8.0 145 75-223 163-346 (413)
129 2ctz_A O-acetyl-L-homoserine s 98.2 5.3E-06 1.8E-10 72.6 8.6 123 90-222 143-307 (421)
130 3get_A Histidinol-phosphate am 98.2 5.5E-06 1.9E-10 70.4 8.3 127 90-223 152-297 (365)
131 3cai_A Possible aminotransfera 98.1 1.4E-05 4.9E-10 68.7 10.7 124 90-223 164-322 (406)
132 3ez1_A Aminotransferase MOCR f 98.1 1.5E-05 5.3E-10 69.1 10.8 115 75-199 160-299 (423)
133 3ei9_A LL-diaminopimelate amin 98.1 5.8E-06 2E-10 72.1 7.7 129 91-223 198-352 (432)
134 3acz_A Methionine gamma-lyase; 98.1 6.9E-06 2.3E-10 71.0 8.1 118 90-218 143-275 (389)
135 1uu1_A Histidinol-phosphate am 98.1 1.2E-05 4.2E-10 67.6 9.4 123 91-223 138-272 (335)
136 1yaa_A Aspartate aminotransfer 98.1 8.4E-06 2.9E-10 70.5 8.5 141 75-223 163-344 (412)
137 2huf_A Alanine glyoxylate amin 98.1 4.5E-05 1.5E-09 65.2 12.8 136 75-223 133-302 (393)
138 3rq1_A Aminotransferase class 98.1 1.3E-05 4.4E-10 69.5 9.3 145 75-223 164-348 (418)
139 1wyu_B Glycine dehydrogenase s 98.1 1.7E-05 5.9E-10 70.4 10.2 126 90-223 202-363 (474)
140 3ecd_A Serine hydroxymethyltra 98.1 1.9E-05 6.6E-10 68.1 10.1 133 75-223 161-309 (425)
141 2cb1_A O-acetyl homoserine sul 98.1 1.3E-05 4.4E-10 69.8 9.0 121 91-222 140-299 (412)
142 2ch1_A 3-hydroxykynurenine tra 98.1 4.4E-05 1.5E-09 65.3 12.3 136 75-223 132-301 (396)
143 3d6k_A Putative aminotransfera 98.0 1.3E-05 4.5E-10 69.8 8.7 104 91-199 178-304 (422)
144 4eu1_A Mitochondrial aspartate 98.0 1.8E-05 6.2E-10 68.4 9.4 141 75-223 170-344 (409)
145 1pff_A Methionine gamma-lyase; 98.0 1.4E-05 4.8E-10 67.0 7.5 119 90-219 82-217 (331)
146 3fkd_A L-threonine-O-3-phospha 98.0 1.8E-05 6.3E-10 66.8 8.3 125 91-223 129-267 (350)
147 3ndn_A O-succinylhomoserine su 98.0 1.3E-05 4.3E-10 70.3 7.4 119 90-217 165-296 (414)
148 3e9k_A Kynureninase; kynurenin 98.0 2.1E-05 7.1E-10 69.4 8.8 137 75-222 201-374 (465)
149 2bkw_A Alanine-glyoxylate amin 98.0 0.00012 4.3E-09 62.0 13.3 136 75-223 126-301 (385)
150 1eg5_A Aminotransferase; PLP-d 98.0 2.8E-05 9.7E-10 66.0 9.2 123 91-223 139-279 (384)
151 2oqx_A Tryptophanase; lyase, p 98.0 5E-05 1.7E-09 66.7 10.9 142 75-223 169-344 (467)
152 3gbx_A Serine hydroxymethyltra 97.9 2.2E-05 7.5E-10 67.7 8.2 132 75-223 158-308 (420)
153 3ele_A Amino transferase; RER0 97.9 6.3E-06 2.1E-10 70.9 4.1 127 91-223 172-323 (398)
154 3n0l_A Serine hydroxymethyltra 97.9 6.9E-05 2.4E-09 64.5 10.7 134 75-223 153-301 (417)
155 3ht4_A Aluminum resistance pro 97.9 2.6E-05 8.9E-10 68.7 7.3 125 90-224 164-308 (431)
156 3h7f_A Serine hydroxymethyltra 97.8 3.5E-05 1.2E-09 67.8 7.3 77 144-223 239-321 (447)
157 3if2_A Aminotransferase; YP_26 97.8 3.7E-05 1.3E-09 67.1 7.2 138 75-221 193-349 (444)
158 3g7q_A Valine-pyruvate aminotr 97.8 6.8E-05 2.3E-09 64.7 8.6 121 91-222 180-324 (417)
159 2oga_A Transaminase; PLP-depen 97.8 6.5E-05 2.2E-09 64.8 8.4 120 91-223 151-294 (399)
160 4e3q_A Pyruvate transaminase; 97.8 1.3E-05 4.4E-10 71.5 4.0 82 2-85 384-468 (473)
161 1svv_A Threonine aldolase; str 97.8 2.5E-05 8.7E-10 65.6 5.6 138 75-221 128-285 (359)
162 3ppl_A Aspartate aminotransfer 97.7 8E-05 2.7E-09 64.7 8.4 105 90-199 179-306 (427)
163 3p1t_A Putative histidinol-pho 97.7 0.00016 5.5E-09 60.3 9.9 125 91-223 135-268 (337)
164 1iug_A Putative aspartate amin 97.7 0.00036 1.2E-08 58.4 11.9 126 90-223 120-271 (352)
165 3nyt_A Aminotransferase WBPE; 97.7 0.00011 3.6E-09 62.6 8.7 120 90-223 122-266 (367)
166 3a9z_A Selenocysteine lyase; P 97.7 7.6E-05 2.6E-09 64.8 7.4 122 91-222 175-324 (432)
167 2jis_A Cysteine sulfinic acid 97.7 0.00049 1.7E-08 61.6 12.9 146 75-223 243-420 (515)
168 1qgn_A Protein (cystathionine 97.7 0.00018 6.2E-09 63.6 9.8 127 75-217 189-329 (445)
169 2qma_A Diaminobutyrate-pyruvat 97.7 0.00015 5E-09 64.6 9.1 143 76-223 243-413 (497)
170 3pj0_A LMO0305 protein; struct 97.7 0.00017 5.8E-09 60.8 9.1 131 89-223 135-277 (359)
171 4f4e_A Aromatic-amino-acid ami 97.7 0.00016 5.4E-09 62.8 9.1 144 75-223 182-355 (420)
172 1b5p_A Protein (aspartate amin 97.7 0.00015 5E-09 62.2 8.8 126 91-223 164-310 (385)
173 1o69_A Aminotransferase; struc 97.7 0.00013 4.5E-09 62.8 8.2 133 75-222 109-265 (394)
174 1e5e_A MGL, methionine gamma-l 97.6 0.00014 4.8E-09 63.2 8.3 118 90-218 146-280 (404)
175 3fsl_A Aromatic-amino-acid ami 97.6 0.00016 5.6E-09 61.8 7.9 145 75-223 160-333 (397)
176 3lws_A Aromatic amino acid bet 97.6 0.00022 7.4E-09 60.2 8.4 119 92-223 136-275 (357)
177 2okj_A Glutamate decarboxylase 97.5 0.0014 4.6E-08 58.4 13.5 146 75-223 229-405 (504)
178 1mdo_A ARNB aminotransferase; 97.5 0.00026 9E-09 60.4 8.1 118 91-223 127-280 (393)
179 1ibj_A CBL, cystathionine beta 97.5 0.0002 6.7E-09 63.6 7.5 118 90-218 216-348 (464)
180 3meb_A Aspartate aminotransfer 97.5 0.00038 1.3E-08 61.1 9.0 142 75-223 189-371 (448)
181 4atq_A 4-aminobutyrate transam 97.4 9.7E-05 3.3E-09 65.6 4.4 77 4-83 374-453 (456)
182 1n8p_A Cystathionine gamma-lya 97.4 0.00036 1.2E-08 60.4 7.8 118 90-218 137-273 (393)
183 3vax_A Putative uncharacterize 97.3 0.00025 8.6E-09 60.6 6.0 122 90-221 158-301 (400)
184 2x3l_A ORN/Lys/Arg decarboxyla 97.3 0.00034 1.2E-08 61.6 6.8 123 91-219 146-283 (446)
185 2po3_A 4-dehydrase; external a 97.3 0.0004 1.4E-08 60.3 7.0 119 91-223 138-280 (424)
186 3frk_A QDTB; aminotransferase, 97.3 0.0011 3.7E-08 56.3 9.6 120 91-223 124-267 (373)
187 1jg8_A L-ALLO-threonine aldola 97.3 0.00086 2.9E-08 56.2 8.7 128 91-223 132-272 (347)
188 2aeu_A Hypothetical protein MJ 97.3 0.00029 1E-08 60.4 5.7 123 90-221 139-282 (374)
189 3mc6_A Sphingosine-1-phosphate 97.2 0.00099 3.4E-08 59.0 8.3 128 91-222 206-363 (497)
190 3cog_A Cystathionine gamma-lya 97.2 0.00071 2.4E-08 58.7 6.7 119 90-219 150-284 (403)
191 3uwc_A Nucleotide-sugar aminot 97.1 0.001 3.4E-08 56.4 7.4 120 91-223 125-268 (374)
192 1v72_A Aldolase; PLP-dependent 97.0 0.0024 8.1E-08 53.4 8.8 122 91-223 141-283 (356)
193 3tcm_A Alanine aminotransferas 97.0 0.0058 2E-07 54.4 11.7 143 75-223 221-403 (500)
194 3bb8_A CDP-4-keto-6-deoxy-D-gl 97.0 0.0027 9.2E-08 55.3 8.9 39 183-223 289-327 (437)
195 3f6t_A Aspartate aminotransfer 97.0 0.0012 4E-08 59.6 6.5 73 91-167 244-330 (533)
196 3b8x_A WBDK, pyridoxamine 5-ph 96.9 0.002 6.8E-08 55.1 7.4 84 136-223 173-289 (390)
197 1b9h_A AHBA synthase, protein 96.9 0.0022 7.5E-08 54.6 7.3 119 91-223 126-273 (388)
198 3dr4_A Putative perosamine syn 96.9 0.0027 9.3E-08 54.2 7.6 121 90-223 143-288 (391)
199 4hvk_A Probable cysteine desul 96.8 0.002 7E-08 54.1 6.7 123 90-223 137-275 (382)
200 3jzl_A Putative cystathionine 96.8 0.0032 1.1E-07 54.9 7.8 127 91-224 159-302 (409)
201 2fnu_A Aminotransferase; prote 96.8 0.0053 1.8E-07 51.7 8.8 119 91-223 121-267 (375)
202 7aat_A Aspartate aminotransfer 96.5 0.018 6E-07 49.1 10.5 133 89-223 173-336 (401)
203 4eb5_A Probable cysteine desul 96.5 0.0047 1.6E-07 52.1 6.7 124 91-223 138-275 (382)
204 3n75_A LDC, lysine decarboxyla 96.4 0.0035 1.2E-07 58.6 5.5 140 75-223 282-442 (715)
205 3hvy_A Cystathionine beta-lyas 96.1 0.021 7.2E-07 50.0 8.7 139 75-224 164-319 (427)
206 2c81_A Glutamine-2-deoxy-scyll 96.0 0.017 6E-07 49.6 7.7 120 91-223 130-286 (418)
207 2fq6_A Cystathionine beta-lyas 95.7 0.039 1.3E-06 48.0 8.6 116 91-218 167-299 (415)
208 3i16_A Aluminum resistance pro 95.7 0.052 1.8E-06 47.5 9.4 138 75-224 164-319 (427)
209 3ri6_A O-acetylhomoserine sulf 95.7 0.022 7.6E-07 49.8 7.0 125 90-221 166-317 (430)
210 4a0g_A Adenosylmethionine-8-am 95.7 0.0025 8.5E-08 60.6 0.8 80 3-84 748-827 (831)
211 2z67_A O-phosphoseryl-tRNA(SEC 95.5 0.12 3.9E-06 45.3 11.0 139 75-223 216-369 (456)
212 3vp6_A Glutamate decarboxylase 95.4 0.29 9.9E-06 43.5 13.4 146 75-223 232-408 (511)
213 3ffr_A Phosphoserine aminotran 95.1 0.054 1.8E-06 45.0 7.2 125 90-223 129-285 (362)
214 2c0r_A PSAT, phosphoserine ami 94.7 0.05 1.7E-06 45.6 6.0 78 145-224 189-283 (362)
215 3ihj_A Alanine aminotransferas 94.6 0.19 6.5E-06 44.5 9.8 73 148-223 313-402 (498)
216 3hmu_A Aminotransferase, class 94.4 0.023 7.9E-07 50.2 3.4 81 2-84 367-451 (472)
217 2fyf_A PSAT, phosphoserine ami 94.3 0.15 5.3E-06 43.3 8.2 80 144-223 213-317 (398)
218 1w23_A Phosphoserine aminotran 94.1 0.14 4.9E-06 42.5 7.4 78 145-223 188-281 (360)
219 3i5t_A Aminotransferase; pyrid 94.0 0.036 1.2E-06 49.0 3.8 82 2-85 370-454 (476)
220 1rv3_A Serine hydroxymethyltra 93.9 0.24 8.3E-06 43.6 8.9 78 144-224 247-345 (483)
221 4e1o_A HDC, histidine decarbox 93.2 1.4 4.7E-05 38.7 12.6 145 75-223 225-399 (481)
222 4a6r_A Omega transaminase; tra 93.0 0.079 2.7E-06 46.3 4.2 82 2-85 365-449 (459)
223 4ao9_A Beta-phenylalanine amin 92.9 0.052 1.8E-06 47.9 2.9 77 3-84 364-445 (454)
224 3dod_A Adenosylmethionine-8-am 92.6 0.12 4E-06 45.0 4.7 82 2-85 359-443 (448)
225 3k40_A Aromatic-L-amino-acid d 91.6 1.4 5E-05 38.5 10.7 146 75-223 218-392 (475)
226 3bwn_A AT1G70560, L-tryptophan 91.4 0.18 6E-06 43.1 4.4 74 148-223 214-301 (391)
227 3gju_A Putative aminotransfera 91.3 0.2 6.9E-06 43.6 4.8 82 2-85 370-456 (460)
228 2a7v_A Serine hydroxymethyltra 91.1 0.27 9.1E-06 43.8 5.4 78 144-224 257-355 (490)
229 1wyu_A Glycine dehydrogenase ( 90.9 1.3 4.6E-05 38.0 9.5 124 91-223 196-363 (438)
230 2hox_A ALLIIN lyase 1; cystein 89.9 0.42 1.4E-05 41.4 5.4 74 148-223 248-336 (427)
231 2vyc_A Biodegradative arginine 89.8 0.74 2.5E-05 43.2 7.4 75 148-223 383-464 (755)
232 1js3_A DDC;, DOPA decarboxylas 89.8 4.3 0.00015 35.3 12.0 146 75-223 219-395 (486)
233 4ffc_A 4-aminobutyrate aminotr 89.0 0.34 1.2E-05 42.2 4.1 80 3-85 367-449 (453)
234 3n5m_A Adenosylmethionine-8-am 87.0 0.4 1.4E-05 41.5 3.4 29 2-30 363-391 (452)
235 2zy4_A L-aspartate beta-decarb 86.9 1.8 6E-05 38.9 7.6 79 90-172 244-338 (546)
236 3ju7_A Putative PLP-dependent 86.4 1.8 6.2E-05 36.6 7.1 77 144-223 180-271 (377)
237 2dgk_A GAD-beta, GADB, glutama 85.9 2.4 8.1E-05 36.6 7.8 80 144-223 253-346 (452)
238 3oks_A 4-aminobutyrate transam 85.6 0.58 2E-05 40.6 3.7 78 3-83 369-449 (451)
239 3tfu_A Adenosylmethionine-8-am 84.5 0.71 2.4E-05 40.3 3.7 72 3-84 381-452 (457)
240 3hbx_A GAD 1, glutamate decarb 81.3 4.5 0.00015 35.6 7.7 81 144-224 268-362 (502)
241 3k7y_A Aspartate aminotransfer 76.1 18 0.00061 30.8 9.7 141 75-221 161-333 (405)
242 3i4j_A Aminotransferase, class 75.2 2.6 8.8E-05 35.9 4.1 20 3-22 339-358 (430)
243 3dxv_A Alpha-amino-epsilon-cap 75.1 1.8 6.2E-05 37.0 3.1 81 3-85 342-425 (439)
244 3m5u_A Phosphoserine aminotran 70.1 22 0.00076 29.9 8.7 80 144-224 185-281 (361)
245 3hl2_A O-phosphoseryl-tRNA(SEC 69.1 27 0.00092 31.0 9.1 135 75-223 202-355 (501)
246 2yky_A Beta-transaminase; tran 71.6 1 3.5E-05 39.6 0.0 21 3-23 378-398 (465)
247 1zod_A DGD, 2,2-dialkylglycine 66.9 5.3 0.00018 33.9 4.2 22 4-25 348-369 (433)
248 1c4k_A Protein (ornithine deca 66.3 4.1 0.00014 38.0 3.5 42 181-222 393-437 (730)
249 3e77_A Phosphoserine aminotran 55.8 19 0.00064 30.6 5.6 73 150-223 206-292 (377)
250 1z7d_A Ornithine aminotransfer 55.2 10 0.00035 32.4 4.0 74 3-85 355-429 (433)
251 2oat_A Ornithine aminotransfer 44.8 18 0.00062 30.9 3.8 20 4-23 365-384 (439)
252 3bc8_A O-phosphoseryl-tRNA(SEC 42.8 93 0.0032 27.1 8.1 138 75-222 184-336 (450)
253 3twe_A Alpha4H; unknown functi 42.4 26 0.00088 17.2 2.5 15 203-217 11-25 (27)
254 3k28_A Glutamate-1-semialdehyd 39.0 30 0.001 29.1 4.3 21 4-24 344-364 (429)
255 3fq8_A Glutamate-1-semialdehyd 37.3 27 0.00093 29.3 3.8 20 4-23 344-363 (427)
256 2pb2_A Acetylornithine/succiny 36.6 26 0.00088 29.6 3.5 20 4-23 344-363 (420)
257 3a8u_X Omega-amino acid--pyruv 36.6 24 0.00082 30.0 3.3 22 3-24 370-391 (449)
258 4h51_A Aspartate aminotransfer 36.2 2E+02 0.0068 24.4 9.8 76 148-223 262-351 (420)
259 1sff_A 4-aminobutyrate aminotr 35.9 33 0.0011 28.6 4.0 79 4-84 342-423 (426)
260 1ohv_A 4-aminobutyrate aminotr 32.7 17 0.00059 31.5 1.7 19 4-22 398-417 (472)
261 3l44_A Glutamate-1-semialdehyd 32.3 42 0.0014 28.2 4.1 78 4-85 347-430 (434)
262 3qm2_A Phosphoserine aminotran 31.5 1.3E+02 0.0044 25.3 7.1 73 150-223 221-307 (386)
263 3ou5_A Serine hydroxymethyltra 29.3 49 0.0017 29.2 4.0 75 144-224 257-355 (490)
264 3nx3_A Acoat, acetylornithine 28.7 25 0.00085 29.1 2.0 21 3-23 322-342 (395)
265 2epj_A Glutamate-1-semialdehyd 27.4 36 0.0012 28.7 2.8 20 4-23 348-367 (434)
266 1v9c_A Precorrin-8X methyl mut 25.8 80 0.0027 24.7 4.3 46 156-202 158-206 (218)
267 4e77_A Glutamate-1-semialdehyd 23.2 33 0.0011 28.8 1.8 21 4-24 345-365 (429)
268 2cjg_A L-lysine-epsilon aminot 22.2 55 0.0019 27.8 3.0 19 4-22 375-394 (449)
269 2e7u_A Glutamate-1-semialdehyd 21.9 42 0.0014 28.1 2.2 20 4-23 344-363 (424)
270 3lwz_A 3-dehydroquinate dehydr 21.4 56 0.0019 24.1 2.4 28 89-120 71-98 (153)
271 2afr_A Cobalamin biosynthesis 21.4 83 0.0028 24.8 3.6 21 181-201 198-218 (231)
No 1
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=100.00 E-value=3.8e-42 Score=308.57 Aligned_cols=178 Identities=25% Similarity=0.454 Sum_probs=155.0
Q ss_pred hccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHH
Q psy6205 39 ITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVY 118 (224)
Q Consensus 39 ~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~ 118 (224)
.+.+...+..++++|++|++...... .+++...+++++++.+.. .++++|||||+|||||++|+++||++||++||
T Consensus 188 ~~~~~~~~~~~~~~p~~~~~~~~~~~--~~~~~~~~~~~l~~~i~~--~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr 263 (473)
T 4e3q_A 188 VFGLPLPGFVHLTCPHYWRYGEEGET--EEQFVARLARELEETIQR--EGADTIAGFFAEPVMGAGGVIPPAKGYFQAIL 263 (473)
T ss_dssp GGTCSCTTEEEECCCCHHHHSCTTCC--HHHHHHHHHHHHHHHHHH--HCGGGEEEEEECSSBSTTTSBCCCTTHHHHHH
T ss_pred ccCCCCCcccccCCCcccccccccch--hhHHHHHHHHHHHHHHHh--hCCCceEEEEeCCccCCCCceeCCHHHHHHHH
Confidence 34455566777888888876543322 245667778888888875 36789999999999999999999999999999
Q ss_pred HH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-cccccceecHHHHHhhhcC-----Ccccc
Q psy6205 119 KH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQET-----GVEYF 180 (224)
Q Consensus 119 ~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~-----~~~~~ 180 (224)
++ |||||||||+ ||++|++| |+|||+|+||+|||| +|+||+++++++++.+... ...|+
T Consensus 264 ~lc~~~gilLI~DEV~tGfGRtG~-~fa~e~~g--v~PDi~t~~K~l~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg 340 (473)
T 4e3q_A 264 PILRKYDIPVISDEVICGFGRTGN-TWGCVTYD--FTPDAIISSKNLTAGFFPMGAVILGPELSKRLETAIEAIEEFPHG 340 (473)
T ss_dssp HHHHHTTCCEEEECTTTSSSTTSS-SCHHHHTT--CCCSEEEECGGGGTTSSCCEEEEECHHHHHHHHHHHHHHSCCCCC
T ss_pred HHhcccceEEeccCccccCCcccc-hhHHHhcC--CCCChHHhcccccCCCCCcccccccHHHHHHhccccccccccccC
Confidence 99 9999999997 89999998 999999999999999 8999999999999988542 24688
Q ss_pred cCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 181 NTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 181 ~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+||+|||++||||+++|++|++++++++++++|++|+++|+++
T Consensus 341 ~T~~Gnpla~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l 383 (473)
T 4e3q_A 341 FTASGHPVGCAIALKAIDVVMNEGLAENVRRLAPRFEERLKHI 383 (473)
T ss_dssp CTTTTCHHHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcchhhhhhhhhhhhccccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999875
No 2
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=100.00 E-value=1.7e-41 Score=303.12 Aligned_cols=170 Identities=26% Similarity=0.486 Sum_probs=140.8
Q ss_pred CCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-
Q psy6205 42 PPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH- 120 (224)
Q Consensus 42 ~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~- 120 (224)
+...++.++|.|+.|+....... ..++...+++.++ +. .++++|||||+|||||++|+++|+++||++||++
T Consensus 184 p~~~~~~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~e---~~--~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc 256 (456)
T 4atq_A 184 PFAPEVYRMPMSYPFREENPEIT--GAEAAKRAITMIE---KQ--IGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWA 256 (456)
T ss_dssp SCCSSEEEECCCCGGGCSSTTCC--HHHHHHHHHHHHH---HH--TCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHH
T ss_pred CccccceecccccccccCCCccc--HHHHHHHHHHHHH---Hh--hcCCceEEEEeccccCCCCccccchhhhHHHHHHH
Confidence 33445566666666654432211 1222223333333 22 2567999999999999999999999999999999
Q ss_pred -----------HHhCCccccccchhhhhcCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHH
Q psy6205 121 -----------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVS 189 (224)
Q Consensus 121 -----------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~ 189 (224)
|||||||||+ ||++|++| |+|||+|+||++|||+|+||+++++++++.+... .|++||+|||++
T Consensus 257 ~~~gillI~DEV~tG~GRtG~-~~a~e~~g--v~PDivt~gK~lggg~P~~av~~~~~i~~~~~~~--~~~~Tf~gnpla 331 (456)
T 4atq_A 257 KEKGIVFIADEVQSGFCRTGE-WFAVDHEG--VVPDIITMAKGIAGGLPLSAITGRADLLDAVHPG--GLGGTYGGNPVA 331 (456)
T ss_dssp HHHTCEEEEECTTTTTTTTSS-SSGGGGTT--CCCSEEEECGGGGTTSSCEEEEEEHHHHTTSCTT--SSCCSSSSCHHH
T ss_pred hhcCCceEecccccccCCccc-cccccccC--CCCchhhhhhcccCcCCceeeEecHHHHhccccc--CCCCCCCCChHH
Confidence 9999999997 89999998 9999999999999999999999999999998654 688999999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 190 CAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 190 ~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
||||+++|++|+++++.++++++|++|+++|+++
T Consensus 332 ~aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~l 365 (456)
T 4atq_A 332 CAAALAAIDTMEQHDLNGRARHIEELALGKLREL 365 (456)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999864
No 3
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=100.00 E-value=8.5e-37 Score=272.29 Aligned_cols=197 Identities=20% Similarity=0.195 Sum_probs=151.7
Q ss_pred EEEEeecCCCCCCccccchhhhccCCCcceeecCCCccccCCCCCC-------CCCCh--hHHHHHHHHHHHHHHHHccC
Q psy6205 18 GVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPCPDVYRGKYPAD-------KYPDE--DLGVKYAQDVQDLIEAMGRN 88 (224)
Q Consensus 18 gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~-------~~~~~--~~~~~~~~~l~~~~~~~~~~ 88 (224)
++|.+.+..++++++..+.++...- ..+...+.+-++||+..... ..+.+ ......++.++++++ ++
T Consensus 142 ~~~~v~f~~SGsEA~e~AiklAr~~-tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~nd~~~l~~~l~---~~ 217 (454)
T 4ao9_A 142 QIEQLRFTNSGTEANLMALTAALHF-TGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYNDAQTARAQIE---RH 217 (454)
T ss_dssp TCSEEEEESSHHHHHHHHHHHHHHH-HTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTTCHHHHHHHHH---HT
T ss_pred CCCEEEEeCchHHHHHHHHHHHHhc-ccCCeEEEEeCCcCCccccccccccCccCCCCcccCCCchHHHHHHHHh---hc
Confidence 3455556666766666665554332 22333344455666643210 00000 000012455666665 36
Q ss_pred CCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC
Q psy6205 89 GKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG 156 (224)
Q Consensus 89 ~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G 156 (224)
+++|||||+|||||++|+++|+++||+.||++ ||| ||||+ +|+++++| |+|||+|+||+||||
T Consensus 218 ~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~t--GR~G~-~~a~e~~g--v~PDi~t~gK~lggG 292 (454)
T 4ao9_A 218 GPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMT--SRLAP-HGLANKLG--IRSDLTTLGKYIGGG 292 (454)
T ss_dssp GGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTG--GGGST-TCHHHHHT--CCCSEEEEEGGGGTT
T ss_pred CCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCc--CCCcc-ccchhccC--CCCcEEEeccccCCC
Confidence 77899999999999999999999999999999 999 59997 89999998 999999999999999
Q ss_pred cccccceecHHHHHhhhcC--CcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 157 HPVAAVITTKEIAKSFQET--GVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 157 ~p~~av~~~~~i~~~~~~~--~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|+||+++++++++.+.+. ...|++||+|||++|||++++|++|++++++++++++|++|+++|+++
T Consensus 293 ~Piga~~~~~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l 361 (454)
T 4ao9_A 293 MSFGAFGGRADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNAL 361 (454)
T ss_dssp SSCEEEEECHHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceeeeeHHHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHH
Confidence 9999999999999998653 235779999999999999999999999999999999999999999874
No 4
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.98 E-value=5.9e-34 Score=270.25 Aligned_cols=146 Identities=21% Similarity=0.348 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHHHHHHc--cCCCCceEEEEccc-cCCCCcccCCHHHHHHHHHH------------HHhCCccccccchh
Q psy6205 70 LGVKYAQDVQDLIEAMG--RNGKRPCAFFAESL-QSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWA 134 (224)
Q Consensus 70 ~~~~~~~~l~~~~~~~~--~~~~~iaavi~Epv-~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~ 134 (224)
+.+.|+++|++.++... .+++++||||+||| ||++|++++|++|+++|+++ |+|||||||+ +|+
T Consensus 571 ~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~-~fa 649 (831)
T 4a0g_A 571 LARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGV-ETT 649 (831)
T ss_dssp HHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSB-SST
T ss_pred hhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCC-chh
Confidence 45567788888776421 35689999999997 99999999999999999999 9999999997 889
Q ss_pred hhhcCCCCCCchhcccccccCC-cccccceecHHHHHhhhcCC----cccccCCCCcHHHHHHHHHHHHHHhhhhHHHHH
Q psy6205 135 FQLQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQETG----VEYFNTYGGNPVSCAVANAVMEVLETENLREHA 209 (224)
Q Consensus 135 ~~~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~~----~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~ 209 (224)
++++| ++|||+|+||+|||| +|+|++++++++++.+.... ..|++||+|||++||+++++|++|+++++.+++
T Consensus 650 ~e~~g--v~PDiitlsK~L~gG~~Plgav~~~~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~ 727 (831)
T 4a0g_A 650 TELLG--CKPDIACFAKLLTGGMVPLAVTLATDAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNI 727 (831)
T ss_dssp HHHHS--SCCSEEEECGGGGTTSSCCEEEEECHHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTB
T ss_pred hHhcC--CCCcEEEEecccccCccCcEEEEECHHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHH
Confidence 99998 999999999999999 69999999999999987542 247899999999999999999999988999998
Q ss_pred HHHHHHHHH
Q psy6205 210 LDVGNQLHT 218 (224)
Q Consensus 210 ~~~g~~l~~ 218 (224)
+++++++++
T Consensus 728 ~~~~~~l~~ 736 (831)
T 4a0g_A 728 TSQGKTLRE 736 (831)
T ss_dssp CTTSSBBCC
T ss_pred HHHHHHHHH
Confidence 777776543
No 5
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.98 E-value=6.3e-32 Score=242.57 Aligned_cols=175 Identities=26% Similarity=0.441 Sum_probs=151.6
Q ss_pred ccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHH
Q psy6205 40 TRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYK 119 (224)
Q Consensus 40 ~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~ 119 (224)
+.+...+..+++.|+.|++ ++.+. +++...++++|+++++.. +++++++||+||+++++|+++++++||++|++
T Consensus 176 ~~~~~~~~~~~~~p~~~~~-~~~~~---~~~~~~~~~~le~~i~~~--~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~ 249 (476)
T 3i5t_A 176 FDIAQDRISFLSSPNPRHA-GNRSQ---EAFLDDLVQEFEDRIESL--GPDTIAAFLAEPILASGGVIIPPAGYHARFKA 249 (476)
T ss_dssp SCCCCTTEEEECCCCGGGC-TTSCH---HHHHHHHHHHHHHHHHHH--CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHH
T ss_pred cCCCCCCcEEeCCCccccc-CCCch---HHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCCcccCCHHHHHHHHH
Confidence 3444456677888888887 44332 566677789999888753 44789999999999999999999999999999
Q ss_pred H------------HHhCCccccccchhhh-hcCCCCCCchhcccccccCC-cccccceecHHHHHhhhcCC-----cccc
Q psy6205 120 H------------VQVGFGRVGTHWWAFQ-LQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQETG-----VEYF 180 (224)
Q Consensus 120 ~------------v~tG~GrtG~~~~~~~-~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~~-----~~~~ 180 (224)
+ |+|||||+|+ +|+++ +++ +.|||+|+||++||| +|+|++++++++++.+.... ..+.
T Consensus 250 lc~~~gillI~DEv~~g~gr~G~-~~~~~~~~~--v~pdi~t~sK~l~~G~~plg~v~~~~~i~~~~~~~~~~~~~~~~~ 326 (476)
T 3i5t_A 250 ICEKHDILYISDEVVTGFGRCGE-WFASEKVFG--VVPDIITFAKGVTSGYVPLGGLAISEAVLARISGENAKGSWFTNG 326 (476)
T ss_dssp HHHHTTCEEEEECTTTTTTTTSS-SCHHHHTTC--CCCSEEEECGGGGTTSSCCEEEEECHHHHHTTSGGGCTTCEECCC
T ss_pred HHHHcCCEEEEEecccCCccccC-ceeeecccC--CCcchhhhhhhhcCCCcCeEEEEECHHHHHHHhcCCccccccccc
Confidence 9 9999999997 78999 998 999999999999999 89999999999999986521 2466
Q ss_pred cCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 181 NTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 181 ~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+||++||++|+|++++|++++++++.+++++++++++++|+++
T Consensus 327 ~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l 369 (476)
T 3i5t_A 327 YTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAALASL 369 (476)
T ss_dssp CTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999998999999999999999999865
No 6
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.97 E-value=1.5e-31 Score=239.89 Aligned_cols=173 Identities=29% Similarity=0.494 Sum_probs=147.1
Q ss_pred CCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--
Q psy6205 43 PVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-- 120 (224)
Q Consensus 43 ~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-- 120 (224)
...++.+++.|++|+.....+ .+++...++++|+++++.. .++++++||+||+++++|+++++++|+++|+++
T Consensus 180 ~~~~~~~v~~p~~~~~~~~~~---~~~~~~~~~~~le~~i~~~--~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~ 254 (472)
T 3hmu_A 180 LIPDVHHINQPNWWAEGGDMD---PEEFGLARARELEEAILEL--GENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICD 254 (472)
T ss_dssp CCSSEEEECCCCHHHHCTTCC---HHHHHHHHHHHHHHHHHHH--CGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHH
T ss_pred CCCCcEEeCCCccccCCcccC---HHHHHHHHHHHHHHHHHhc--CCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHH
Confidence 334566777777776321121 2556667788898888753 457899999999999999999999999999999
Q ss_pred ----------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-cccccceecHHHHHhhhcCCcccccCCCCcHHH
Q psy6205 121 ----------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVS 189 (224)
Q Consensus 121 ----------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~ 189 (224)
|+|||||+|+ +|++++++ +.|||+||||+|||| +|+|++++++++++.+......+.+||++||++
T Consensus 255 ~~gillI~DEv~~gfgr~G~-~~a~~~~~--v~pdi~t~sK~l~gg~~plG~v~~~~~i~~~~~~~~~~~~~t~~~np~a 331 (472)
T 3hmu_A 255 KYDILLIADEVICGFGRTGN-WFGTQTMG--IRPHIMTIAKGLSSGYAPIGGSIVCDEVAHVIGKDEFNHGYTYSGHPVA 331 (472)
T ss_dssp HTTCEEEEECTTTTTTTTSS-SCHHHHHT--CCCSEEEECGGGTTTSSCCEEEEEEHHHHHHHTTSCBCCCCTTTTCHHH
T ss_pred HcCCEEEEEccccCCcccCc-cchhHHhC--CCCceeeechhhhcCCcceEEEEECHHHHHhcccCCccccCCCCCCHHH
Confidence 9999999997 88999998 999999999999998 799999999999999943333567899999999
Q ss_pred HHHHHHHHHHHhhhhHHHHHH-HHHHHHHHhhhhc
Q psy6205 190 CAVANAVMEVLETENLREHAL-DVGNQLHTPKKEN 223 (224)
Q Consensus 190 ~aaa~a~l~~~~~~~l~~~~~-~~g~~l~~~l~~l 223 (224)
|+|++++|++++++++.++++ +++++++++|+++
T Consensus 332 ~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l 366 (472)
T 3hmu_A 332 AAVALENLRILEEENILDHVRNVAAPYLKEKWEAL 366 (472)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999899999999 9999999999765
No 7
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.96 E-value=9.7e-29 Score=220.43 Aligned_cols=176 Identities=23% Similarity=0.397 Sum_probs=148.5
Q ss_pred ccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHH
Q psy6205 40 TRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYK 119 (224)
Q Consensus 40 ~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~ 119 (224)
+.+...+..+++.|.+|++..... +.+++...++++|++.+... +++++++||+||+++++|+++++++|+++|++
T Consensus 174 ~~~~~~~~~~~~~p~~~~~~~~g~--~~~~~~~~~~~~le~~i~~~--~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~ 249 (460)
T 3gju_A 174 FDLPRAPVLHTEAPYYFRRTDRSM--SEEQFSQHCADKLEEMILAE--GPETIAAFIGEPILGTGGIVPPPAGYWEKIQA 249 (460)
T ss_dssp TTCSCTTEEEECCCCGGGCSCTTC--CHHHHHHHHHHHHHHHHHHH--CGGGEEEEEECSSBSTTTSBCCCTTHHHHHHH
T ss_pred cCCCCCCCEEeCCCccccCCcccc--ChhHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHHHHHHHH
Confidence 344445667778888887653211 12455667788898888642 45789999999999999999999999999999
Q ss_pred H------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-cccccceecHHHHHhhhc-----CCccccc
Q psy6205 120 H------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQE-----TGVEYFN 181 (224)
Q Consensus 120 ~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~-----~~~~~~~ 181 (224)
+ |++||||+|+ +|++++++ +.||++|+||+|||| +|+|++++++++++.+.. ....+.+
T Consensus 250 l~~~~~~llI~DEv~~g~gr~g~-~~~~~~~~--~~pdi~t~sK~l~gG~~~lg~v~~~~~i~~~~~~~~~~~~~~~~~~ 326 (460)
T 3gju_A 250 VLKKYDVLLVADEVVTGFGRLGT-MFGSDHYG--IKPDLITIAKGLTSAYAPLSGVIVADRVWQVLVQGSDKLGSLGHGW 326 (460)
T ss_dssp HHHHTTCEEEEECTTTTTTTTSS-SCHHHHHT--CCCSEEEECGGGTTTSSCCEEEEEEHHHHHHHHHHHHHHCSCSCCC
T ss_pred HHHHcCCEEEEeccccCCCcccc-cchHhhcC--CCCCeeeeehhhcCCCCCeEEEEECHHHHHHHhcccccccccccCC
Confidence 9 9999999997 78999998 999999999999999 699999999999999852 2235678
Q ss_pred CCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh
Q psy6205 182 TYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 182 T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~ 222 (224)
||++||++|++++++|++++++++.+++++++++++++|++
T Consensus 327 t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~ 367 (460)
T 3gju_A 327 TYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRAELAK 367 (460)
T ss_dssp TTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998899999999999999999854
No 8
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.96 E-value=1.4e-28 Score=218.58 Aligned_cols=174 Identities=29% Similarity=0.492 Sum_probs=150.3
Q ss_pred cCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccc-cCCCCcccCCHHHHHHHHH
Q psy6205 41 RPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESL-QSCGGQIIPPANYLREVYK 119 (224)
Q Consensus 41 ~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv-~~~~G~~~~~~~~l~~~~~ 119 (224)
.+...+..+++.|++|+++++.+. +++...++++|++.++. .+++++++||+||+ ++ +|++.|+++|+++|++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~le~~l~~--~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~ 243 (452)
T 3n5m_A 170 EPFASGFLHVTPPDCYRMPGIERE---NIYDVECVKEVDRVMTW--ELSETIAAFIMEPIITG-GGILMAPQDYMKAVHE 243 (452)
T ss_dssp CCCCSCEEEECCCCTTTSTTTTTS---CGGGCHHHHHHHHHHHH--HCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHH
T ss_pred CCCCCCCeEeCCCccccCccCCch---hhHHHHHHHHHHHHHHh--cCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHH
Confidence 444456777888999998876543 45555678888888863 25578999999999 89 9999999999999999
Q ss_pred H------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-cccccceecHHHHHhhhc----CCcccccC
Q psy6205 120 H------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQE----TGVEYFNT 182 (224)
Q Consensus 120 ~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~----~~~~~~~T 182 (224)
+ |++||||+|+ +|++++++ +.||++|+||++++| +|+|++++++++++.+.. ....+.+|
T Consensus 244 l~~~~~~llI~DEv~~g~g~~g~-~~~~~~~~--~~~di~t~sK~l~~G~~~ig~~~~~~~i~~~~~~~~~~~~~~~~~t 320 (452)
T 3n5m_A 244 TCQKHGALLISDEVICGFGRTGK-AFGFMNYD--VKPDIITMAKGITSAYLPLSATAVKREIYEAFKGKGEYEFFRHINT 320 (452)
T ss_dssp HHHHHTCEEEEECTTTTTTTTSS-SSGGGGTT--CCCSEEEECGGGGTTSSCCEEEEEEHHHHGGGCSSSTTCSCCCCCS
T ss_pred HHHHcCCEEEEecchhCCCcccc-cchhhhcC--CCCCEEeecccccCCCcceEEEEECHHHHHHHhhccCCCCccccCC
Confidence 9 9999999997 78999998 999999999999999 899999999999999854 22346789
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 183 YGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 183 ~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|++||++|++++++|+.++++++.+++++++++++++|+++
T Consensus 321 ~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~ 361 (452)
T 3n5m_A 321 FGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQLKEE 361 (452)
T ss_dssp STTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998999999999999999999764
No 9
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.96 E-value=1.2e-28 Score=219.70 Aligned_cols=167 Identities=28% Similarity=0.462 Sum_probs=139.9
Q ss_pred CcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH---
Q psy6205 44 VRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--- 120 (224)
Q Consensus 44 ~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--- 120 (224)
..++.+++.|++|+.+++.+. ++..+.+++.|++.+ .++++++||+||+++++|+++++++|+++|+++
T Consensus 186 ~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~l~~~i-----~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~ 257 (453)
T 4ffc_A 186 APEVYRMPASYPLRDEPGLTG---EEAARRAISRIETQI-----GAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASE 257 (453)
T ss_dssp CSSEEEECCCCTTTSCTTCCH---HHHHHHHHHHHHHHT-----CGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHH
T ss_pred CCCcEEeCCCccccCccccch---HHHHHHHHHHHHHhc-----CCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 345566677776766544321 333334444444333 346899999999999999999999999999998
Q ss_pred ---------HHhCCccccccchhhhhcCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHH
Q psy6205 121 ---------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCA 191 (224)
Q Consensus 121 ---------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~a 191 (224)
|++||||+|+ +|++++++ +.||++||||++++|+|+|++++++++++.+... .+.+||++||++|+
T Consensus 258 ~~~llI~DEv~~g~g~~g~-~~a~~~~~--~~pdi~t~sK~~~~G~~~G~~~~~~~i~~~~~~~--~~~~t~~~~~~~~a 332 (453)
T 4ffc_A 258 NGVVFIADEVQTGFARTGA-WFASEHEG--IVPDIVTMAKGIAGGMPLSAVTGRAELMDAVYAG--GLGGTYGGNPVTCA 332 (453)
T ss_dssp HTCEEEEECTTTTTTTTSS-SSTHHHHT--CCCSEEEECGGGGTTSSCEEEEEEHHHHTTSCTT--SSCCSSSSCHHHHH
T ss_pred cCCEEEEecCccCCCcccc-cchhhhcC--CCcchHhhhhhhcCCcCeEEEEECHHHHhhhccc--CcCCCCCcCHHHHH
Confidence 9999999997 88999998 9999999999999999999999999999988654 57799999999999
Q ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 192 VANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 192 aa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++++|+.++++++.+++++++++++++|+++
T Consensus 333 aa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~ 364 (453)
T 4ffc_A 333 AAVAALGVMRELDLPARARAIEASVTSRLSAL 364 (453)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999988899999999999999999764
No 10
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.96 E-value=1.8e-28 Score=218.43 Aligned_cols=169 Identities=28% Similarity=0.420 Sum_probs=139.8
Q ss_pred ceeecCCCccccCCC-CCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH----
Q psy6205 46 MSTEAPCPDVYRGKY-PADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH---- 120 (224)
Q Consensus 46 ~~~~vp~P~~yr~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~---- 120 (224)
++.+++.|+.|+.++ +.+. +.+...+++.+++.++... .++++++||+||+++++|++.++++|+++|+++
T Consensus 185 ~~~~~~~~~~~~~~~~g~~~---~~~~~~~~~~~~~~l~~~~-~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~ 260 (451)
T 3oks_A 185 EIYRAPLSYPFRDAEFGKEL---ATDGELAAKRAITVIDKQI-GADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKN 260 (451)
T ss_dssp SEEEECCCCHHHHGGGCTTT---TTCHHHHHHHHHHHHHHHT-CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHT
T ss_pred CcEEeCCCcccccccccccc---chhhHHHHHHHHHHHHhhc-CCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHc
Confidence 445556665555432 1111 2233445666655555321 457899999999999999999999999999999
Q ss_pred --------HHhCCccccccchhhhhcCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHH
Q psy6205 121 --------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAV 192 (224)
Q Consensus 121 --------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aa 192 (224)
|++||||+|+ +|++++++ +.||++||||++++|+|+|++++++++++.+... .+.+||++||++|++
T Consensus 261 g~~lI~DEv~~g~g~~g~-~~~~~~~~--~~pdi~t~sK~l~~G~~iG~v~~~~~~~~~~~~~--~~~~t~~~~~~~~aa 335 (451)
T 3oks_A 261 DVVFIADEVQTGFARTGA-MFACEHEG--IDPDLIVTAKGIAGGLPLSAVTGRAEIMDSPHVS--GLGGTYGGNPIACAA 335 (451)
T ss_dssp TCEEEEECTTTTTTTTSS-SSGGGGGT--CCCSEEEECGGGGTTSSCEEEEEEHHHHTCSCTT--SBCCSSSSCHHHHHH
T ss_pred CCEEEEEecccCCCcccc-chhhhhcC--CCCCeeeehhhhhCCcceEEEEECHHHHhhhcCC--CcCCCCCCCHHHHHH
Confidence 9999999997 78999998 9999999999999999999999999999988654 578999999999999
Q ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 193 ANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 193 a~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
++++|+.++++++.+++++++++++++|+++
T Consensus 336 a~aal~~~~~~~~~~~~~~~~~~l~~~L~~~ 366 (451)
T 3oks_A 336 ALATIETIESEGLVARAQQIEKIMKDRLGRL 366 (451)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999988899999999999999999764
No 11
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.96 E-value=1.2e-28 Score=219.82 Aligned_cols=175 Identities=29% Similarity=0.487 Sum_probs=145.6
Q ss_pred cCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH
Q psy6205 41 RPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH 120 (224)
Q Consensus 41 ~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~ 120 (224)
.+...+..+++.|++|+.....+ .+.+...++++|++.+... +++++++||+||+++++|++.++++|+++++++
T Consensus 174 ~~~~~~~~~~~~p~~~~~~~~~d---~~~~~~~~~~~le~~i~~~--~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l 248 (459)
T 4a6r_A 174 DLPIPGMAHIEQPWWYKHGKDMT---PDEFGVVAARWLEEKILEI--GADKVAAFVGEPIQGAGGVIVPPATYWPEIERI 248 (459)
T ss_dssp CCSCSSEEEECCCCHHHHCTTCC---HHHHHHHHHHHHHHHHHHH--CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHH
T ss_pred CCCCCCCEEeCCCccccCCcccC---HHHHHHHHHHHHHHHHHHc--CCCCEEEEEECCccCCCCcccCCHHHHHHHHHH
Confidence 33344566677777676321122 2455566788888888643 457899999999999999999999999999999
Q ss_pred ------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-cccccceecHHHHHhhhcC-CcccccCCCCc
Q psy6205 121 ------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQET-GVEYFNTYGGN 186 (224)
Q Consensus 121 ------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~-~~~~~~T~~~~ 186 (224)
|++||||+|+ +|++++++ +.||++||||+|+|| +|+|++++++++++.+... ...+.+||++|
T Consensus 249 ~~~~~~llI~DEv~~g~gr~G~-~~~~~~~~--~~pdi~t~sK~l~gg~~~lg~v~~~~~i~~~~~~~~~~~~~~t~~~~ 325 (459)
T 4a6r_A 249 CRKYDVLLVADEVICGFGRTGE-WFGHQHFG--FQPDLFTAAKGLSSGYLPIGAVFVGKRVAEGLIAGGDFNHGFTYSGH 325 (459)
T ss_dssp HHHTTCEEEEECTTTTTTTTSS-SSHHHHHT--CCCSEEEECGGGGTTSSCCEEEEECHHHHHHHHHHCTTHHHHHHCSC
T ss_pred HHHcCCEEEEeccccCCCcccc-cchHhhcC--CCCCeeehhhhhcCCCCCccceeeCHHHHHHhhcCCCcccCCCCCCC
Confidence 9999999997 78999998 999999999999998 7999999999999998632 22567899999
Q ss_pred HHHHHHHHHHHHHHhhhhHHHHHH-HHHHHHHHhh-hhc
Q psy6205 187 PVSCAVANAVMEVLETENLREHAL-DVGNQLHTPK-KEN 223 (224)
Q Consensus 187 p~~~aaa~a~l~~~~~~~l~~~~~-~~g~~l~~~l-~~l 223 (224)
|++|++++++|++++++++.++++ +++++++++| +.+
T Consensus 326 ~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l 364 (459)
T 4a6r_A 326 PVCAAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETF 364 (459)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998899999999 9999999998 543
No 12
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.95 E-value=4.8e-28 Score=215.13 Aligned_cols=171 Identities=30% Similarity=0.513 Sum_probs=143.2
Q ss_pred CCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEcccc-CCCCcccCCHHHHHHHHHH
Q psy6205 42 PPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQ-SCGGQIIPPANYLREVYKH 120 (224)
Q Consensus 42 ~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~-~~~G~~~~~~~~l~~~~~~ 120 (224)
+...+..+++.|++||++ +... +.+...++++|++.++. +++++++||+||++ +++|++.++++|+++++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~d~~~le~~l~~---~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l 240 (448)
T 3dod_A 168 PLMFESYKAPIPYVYRSE-SGDP---DECRDQCLRELAQLLEE---HHEEIAALSIESMVQGASGMIVMPEGYLAGVREL 240 (448)
T ss_dssp -----CEEECCCCCTTSS-SCCH---HHHHHHHHHHHHHHHHH---HGGGEEEEEEESSEESTTTCEECCTTHHHHHHHH
T ss_pred CCCCCceEeCCCccccCC-ccch---hhhhHHHHHHHHHHHHh---CCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHH
Confidence 334456778888888876 3221 34444567777777762 45789999999998 9999999999999999999
Q ss_pred ------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-cccccceecHHHHHhhhc-----CCcccccC
Q psy6205 121 ------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQE-----TGVEYFNT 182 (224)
Q Consensus 121 ------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~-----~~~~~~~T 182 (224)
|++||||+|+ +|++++++ +.||++|+||++++| +|+|++++++++++.+.. ....+.+|
T Consensus 241 ~~~~~~~lI~DEv~~g~g~~g~-~~a~~~~~--~~~di~t~sK~l~~G~~~ig~v~~~~~~~~~~~~~~~~~~~~~~~~t 317 (448)
T 3dod_A 241 CTTYDVLMIVDEVATGFGRTGK-MFACEHEN--VQPDLMAAGKGITGGYLPIAVTFATEDIYKAFYDDYENLKTFFHGHS 317 (448)
T ss_dssp HHHTTCEEEEECTTTTTTTTSS-SSGGGGGT--CCCSEEEECGGGGTTSSCCEEEEEEHHHHHTTCSCGGGCCCCCCCCT
T ss_pred HHHhCCEEEEeccccCCCcccc-hhhhhhcC--CCCCEEEecccccCCcCceEEEEECHHHHHHhhhccccCCcccccCC
Confidence 9999999997 78999998 999999999999999 599999999999999864 11356789
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh
Q psy6205 183 YGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 183 ~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~ 222 (224)
|++||++|++++++|+.++++++.+++++++++++++|++
T Consensus 318 ~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~ 357 (448)
T 3dod_A 318 YTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFLLQD 357 (448)
T ss_dssp TTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998899999999999999999875
No 13
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.95 E-value=5.5e-28 Score=215.89 Aligned_cols=144 Identities=26% Similarity=0.454 Sum_probs=129.6
Q ss_pred HHHHHHHHHHHHccCCCCceEEEEcc-ccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCC
Q psy6205 74 YAQDVQDLIEAMGRNGKRPCAFFAES-LQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGD 140 (224)
Q Consensus 74 ~~~~l~~~~~~~~~~~~~iaavi~Ep-v~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~ 140 (224)
.+++|++.++. +++++++||+|| +|+++|++.++++|+++++++ |++||||+|+ +|++++++
T Consensus 219 d~~~le~~l~~---~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~-~~a~~~~~- 293 (457)
T 3tfu_A 219 YSAAFEAQLAQ---HAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGA-LFAADHAG- 293 (457)
T ss_dssp HHHHHHHHHHH---HGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSTHHHHT-
T ss_pred HHHHHHHHHHh---CCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccc-hhHhHhcC-
Confidence 46677777654 456899999999 999999999999999999998 9999999997 88999998
Q ss_pred CCCCchhcccccccCC-cccccceecHHHHHhhhc---CCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q psy6205 141 DIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQE---TGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQL 216 (224)
Q Consensus 141 ~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~---~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l 216 (224)
+.||++||||+|+|| +|+|++++++++++.+.. ....+++||++||++|++++++|++++++++.++++++++++
T Consensus 294 -~~pdiit~sK~l~gG~~~lG~v~~~~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l 372 (457)
T 3tfu_A 294 -VSPDIMCVGKALTGGYLSLAATLCTADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLGQDWRTRITELAAGL 372 (457)
T ss_dssp -CCCSEEEECGGGGTTSSCCEEEEEEHHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred -CCceEEEEChhhhCCCcceEEEEEcHHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 999999999999999 599999999999999852 223567999999999999999999999899999999999999
Q ss_pred HHhhhhc
Q psy6205 217 HTPKKEN 223 (224)
Q Consensus 217 ~~~l~~l 223 (224)
+++|+++
T Consensus 373 ~~~L~~l 379 (457)
T 3tfu_A 373 TAGLDTA 379 (457)
T ss_dssp HHHHGGG
T ss_pred HHHHHHH
Confidence 9999875
No 14
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.92 E-value=1.9e-24 Score=190.58 Aligned_cols=170 Identities=30% Similarity=0.472 Sum_probs=139.2
Q ss_pred ceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-----
Q psy6205 46 MSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH----- 120 (224)
Q Consensus 46 ~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----- 120 (224)
+...++.|+.|+++++.+. +++...++++|++.++.. +++++++|++||+++++|.+.++++|+++++++
T Consensus 163 ~~~~v~~~~~~~~~~~~~~---~~~~~~d~~~le~~l~~~--~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~ 237 (433)
T 1zod_A 163 GSFAIPAPFTYRPRFERNG---AYDYLAELDYAFDLIDRQ--SSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARG 237 (433)
T ss_dssp TEEEECCCCTTSCCCEETT---EECHHHHHHHHHHHHHHH--CCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHT
T ss_pred CceEecCCcccccccCCch---hhhHHHHHHHHHHHHHhc--CCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhC
Confidence 4445555655555443211 223344577888777642 336899999999999999999999999999998
Q ss_pred -------HHhCCccccccchhhhhcCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHH
Q psy6205 121 -------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVA 193 (224)
Q Consensus 121 -------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa 193 (224)
|++||||+|. ++++++++ +.||++++||++++|+|+|++++++++++.+......+.+||++||++++++
T Consensus 238 ~~li~DEv~~~~g~~g~-~~~~~~~~--~~~di~s~sK~~~~G~~ig~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~ 314 (433)
T 1zod_A 238 MLLILDEAQTGVGRTGT-MFACQRDG--VTPDILTLSKTLGAGLPLAAIVTSAAIEERAHELGYLFYTTHVSDPLPAAVG 314 (433)
T ss_dssp CEEEEECTTTTTTTTSS-SSTHHHHT--CCCSEEEECHHHHTTSSCEEEEECHHHHHHHHHTTCCCCCTTTTCHHHHHHH
T ss_pred CEEEEeccccCCCcCch-HhHHhhcC--CCCCEEEecccccCCCCeeEEEEhHHHHHhhccCCCCCCCCCCcCHHHHHHH
Confidence 9999999997 78889998 9999999999999999999999999999988754223448999999999999
Q ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 194 NAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 194 ~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++|+.++++++.+++++++++|+++|+++
T Consensus 315 ~aal~~~~~~~~~~~~~~~~~~l~~~l~~l 344 (433)
T 1zod_A 315 LRVLDVVQRDGLVARANVMGDRLRRGLLDL 344 (433)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 999999988899999999999999999764
No 15
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.92 E-value=4.7e-24 Score=189.11 Aligned_cols=172 Identities=27% Similarity=0.470 Sum_probs=140.7
Q ss_pred cceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH----
Q psy6205 45 RMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH---- 120 (224)
Q Consensus 45 ~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~---- 120 (224)
.+...++.|..|+..+... +.+++...++++|++.++.. .++++++|++||+++++|++.++++|+++++++
T Consensus 177 ~~~~~v~~~~~~~~~~~~~--d~~~~~~~~~~~le~~l~~~--~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~ 252 (449)
T 3a8u_X 177 QDVDHLPHTLLASNAYSRG--MPKEGGIALADELLKLIELH--DASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQH 252 (449)
T ss_dssp CSEEEECCCCCGGGTTCSS--SCSSSHHHHHHHHHHHHHHH--CGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHH
T ss_pred CCCeEecCCccccCccccC--ChHHHHHHHHHHHHHHHHhc--CCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHh
Confidence 3455666666565432110 11334456678888887642 235789999999999999999999999999998
Q ss_pred --------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-cccccceecHHHHHhhhcCCc-------ccccCCC
Q psy6205 121 --------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQETGV-------EYFNTYG 184 (224)
Q Consensus 121 --------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~~~-------~~~~T~~ 184 (224)
|++||||+|+ +|++++++ +.||++++||++++| +|+|++++++++++.+..... .+.+||+
T Consensus 253 ~~~li~Dev~~~~g~~g~-~~~~~~~~--~~~di~s~sK~l~~G~~~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~t~~ 329 (449)
T 3a8u_X 253 NILLVFDEVITGFGRTGS-MFGADSFG--VTPDLMCIAKQVTNGAIPMGAVIASTEIYQTFMNQPTPEYAVEFPHGYTYS 329 (449)
T ss_dssp TCEEEEECTTTTTTTTSS-SSHHHHHT--CCCSEEEECGGGGTTSSCCEEEEEEHHHHHHHHTCSSCTTSCSSCCCCTTT
T ss_pred CCEEEEeccccCccccCc-chhhhhcC--CCCCEEEEcccccCCCCceEEEEECHHHHHHhhccCcccccccccccCCCc
Confidence 9999999997 77889998 999999999999999 899999999999998865311 3568999
Q ss_pred CcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 185 GNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 185 ~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+||+++++++++|+.++++++.+++++++++++++|+++
T Consensus 330 ~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l 368 (449)
T 3a8u_X 330 AHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGI 368 (449)
T ss_dssp TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988899999999999999999764
No 16
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.92 E-value=1.5e-24 Score=192.06 Aligned_cols=129 Identities=33% Similarity=0.607 Sum_probs=119.8
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG- 156 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G- 156 (224)
+++++||+||+++++|++.++++++++++++ |++||||+|+ +|++++++ +.||++|+||++++|
T Consensus 211 ~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~-~~~~~~~~--~~~di~t~sK~l~~G~ 287 (433)
T 1z7d_A 211 PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGK-LLCVHHYN--VKPDVILLGKALSGGH 287 (433)
T ss_dssp TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSGGGGGT--CCCSEEEECGGGGTTS
T ss_pred CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCc-chhhHhcC--CCCCEEEECccccCCC
Confidence 5789999999999999999999999999999 9999999997 78889998 999999999999999
Q ss_pred cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 157 HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 157 ~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|+|++++++++++.+... .+.+||++||++|++++++|+.++++++.+++++++++|+++|+++
T Consensus 288 ~~~G~v~~~~~~~~~l~~~--~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l 352 (433)
T 1z7d_A 288 YPISAVLANDDIMLVIKPG--EHGSTYGGNPLAASICVEALNVLINEKLCENAEKLGGPFLENLKRE 352 (433)
T ss_dssp SCCEEEEECHHHHTTCCTT--CCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEECHHHHhhhccc--cccccCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999887643 4678999999999999999999988899999999999999999864
No 17
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.91 E-value=2e-24 Score=191.78 Aligned_cols=129 Identities=38% Similarity=0.627 Sum_probs=120.3
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG- 156 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G- 156 (224)
+++++||+||+++++|++.++++++++++++ |++||||+|+ +|++++++ +.||++++||++++|
T Consensus 222 ~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~-~~~~~~~~--~~~Di~t~sK~l~~G~ 298 (439)
T 2oat_A 222 PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGR-WLAVDYEN--VRPDIVLLGKALSGGL 298 (439)
T ss_dssp TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSGGGGGT--CCCSEEEECGGGGTTS
T ss_pred CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCc-chhHHHhC--CCCcEEEecccccCCC
Confidence 4789999999999999999999999999999 9999999997 78889998 999999999999999
Q ss_pred cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 157 HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 157 ~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|+|++++++++++.+... .+.+||++||++|++++++|+.++++++.+++++++++|+++|+++
T Consensus 299 ~~~G~v~~~~~~~~~l~~~--~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l 363 (439)
T 2oat_A 299 YPVSAVLCDDDIMLTIKPG--EHGSTYGGNPLGCRVAIAALEVLEEENLAENADKLGIILRNELMKL 363 (439)
T ss_dssp SCCEEEEECHHHHTTSCTT--SSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTS
T ss_pred CCeEEEEECHHHHhccCCC--CcccCCCcCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999888643 4678999999999999999999988899999999999999999875
No 18
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.86 E-value=1.6e-26 Score=206.93 Aligned_cols=142 Identities=19% Similarity=0.297 Sum_probs=124.2
Q ss_pred HHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCC
Q psy6205 77 DVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIP 144 (224)
Q Consensus 77 ~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~p 144 (224)
+++++.+.+.++++++++||+||+++++|++.++++|++.|+++ |++ | |+|. +|+++++| +.|
T Consensus 219 d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~-r~g~-~~a~~~~g--v~p 293 (465)
T 2yky_A 219 DVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-S-RLSG-GGAQEMLG--ISA 293 (465)
Confidence 34433333323446899999999999999999999999999998 999 7 9997 78999998 999
Q ss_pred chhcccccccCCcccccceecHHHHHhhhc---CCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 145 DIVTVGKPMGNGHPVAAVITTKEIAKSFQE---TGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 145 Di~~~~K~l~~G~p~~av~~~~~i~~~~~~---~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
||+||||++|+|+|+|++++++++++.+.. ....+.+||++||++|++++++|++++++++.+++++++++|+++|+
T Consensus 294 Di~t~sK~lg~G~piG~v~~~~~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~~~~~~~~~~~~~~l~~~L~ 373 (465)
T 2yky_A 294 DLTTLGKYIGGGMSFGAFGGRRDLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYTRQAASDLSASGDRFRANLN 373 (465)
Confidence 999999999999999999999999998875 21246689999999999999999999989999999999999999998
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 374 ~~ 375 (465)
T 2yky_A 374 RI 375 (465)
Confidence 65
No 19
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.91 E-value=4.8e-24 Score=187.92 Aligned_cols=146 Identities=27% Similarity=0.436 Sum_probs=130.4
Q ss_pred HHHHHHHHHHHHHccCCCCceEEEEccccC-CCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhc-
Q psy6205 73 KYAQDVQDLIEAMGRNGKRPCAFFAESLQS-CGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQ- 138 (224)
Q Consensus 73 ~~~~~l~~~~~~~~~~~~~iaavi~Epv~~-~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~- 138 (224)
.++++|++.++.. +++++++|++||+++ ++|++.++++|+++++++ |++||||+|+ +++++++
T Consensus 174 ~~~~~le~~l~~~--~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~-~~~~~~~~ 250 (430)
T 3i4j_A 174 EDAEGLRALLERE--GPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGS-PLALSRWS 250 (430)
T ss_dssp HHHTHHHHHHHHH--CGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGTT
T ss_pred HHHHHHHHHHHhc--CCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc-hhhhhhhc
Confidence 4567788877643 346899999999999 999999999999999998 9999999997 7899999
Q ss_pred CCCCCCchhcccccccCC-cccccceecHHHHHhhhcCC--cccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q psy6205 139 GDDIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQETG--VEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQ 215 (224)
Q Consensus 139 g~~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~~--~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~ 215 (224)
+ +.||++|+||++++| +|+|++++++++++.+.... ..+.+||++||+++++++++|+.++++++.+++++++++
T Consensus 251 ~--~~~di~t~sK~l~~G~~r~G~~~~~~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~ 328 (430)
T 3i4j_A 251 G--VTPDIAVLGKGLAAGYAPLAGLLAAPQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQ 328 (430)
T ss_dssp T--CCCSEEEECGGGTTTSSCCEEEEECHHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred C--CCCcEEEEcccccCCccccEEEEECHHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 8 999999999999999 89999999999999987532 246689999999999999999999889999999999999
Q ss_pred HHHhhhhc
Q psy6205 216 LHTPKKEN 223 (224)
Q Consensus 216 l~~~l~~l 223 (224)
++++|+++
T Consensus 329 ~~~~l~~~ 336 (430)
T 3i4j_A 329 LLAGLQAL 336 (430)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99998764
No 20
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.91 E-value=2.4e-24 Score=190.10 Aligned_cols=142 Identities=29% Similarity=0.402 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
+++|++.++. +++++++||+||+++++|++.++++|+++|+++ |++|| |+|. ++++++++ +
T Consensus 189 ~~~le~~l~~---~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~-~~~~~~~~--~ 261 (434)
T 3l44_A 189 VETLKEALDK---WGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMY-GGAQDLLG--V 261 (434)
T ss_dssp HHHHHHHHHH---HGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSS-SCHHHHHT--C
T ss_pred HHHHHHHHHh---CCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccc-cHHHHHcC--C
Confidence 4566666653 346899999999999999999999999999999 99999 9997 78899998 9
Q ss_pred CCchhcccccccCCcccccceecHHHHHhhhcCC-cccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 143 IPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETG-VEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 143 ~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~-~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
.||++|+||++++|+|+|++++++++++.+.... ..+.+||++||++|++++++|++++++++.+++++++++++++|+
T Consensus 262 ~~di~t~sK~~~~G~~iG~~~~~~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~ 341 (434)
T 3l44_A 262 TPDLTALGKVIGGGLPIGAYGGKKEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGIL 341 (434)
T ss_dssp CCSEEEEEGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHH
T ss_pred CCCeeehhhhhcCCcCeeeEEEcHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999886532 246689999999999999999999889999999999999999997
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 342 ~~ 343 (434)
T 3l44_A 342 EQ 343 (434)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 21
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.91 E-value=6.3e-24 Score=187.28 Aligned_cols=142 Identities=25% Similarity=0.342 Sum_probs=125.7
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
+++|+++++. +++++++||+||+++++|++.++++|+++++++ |++|| |+|. ++++++++ +
T Consensus 187 ~~~le~~l~~---~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~-~~~~~~~~--~ 259 (429)
T 4e77_A 187 LASVRQAFEQ---YPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVAL-AGAQDYYH--V 259 (429)
T ss_dssp HHHHHHHHHH---STTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBT-TCHHHHTT--C
T ss_pred HHHHHHHHHh---cCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCc-chHHHhcC--C
Confidence 5667766653 556899999999999999999999999999999 99999 9997 78999998 9
Q ss_pred CCchhcccccccCCcccccceecHHHHHhhhcCC-cccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 143 IPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETG-VEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 143 ~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~-~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
.||++|+||++++|+|+|++++++++++.+.... ..+.+||++||++|++++++|++++++++.+++++++++++++|+
T Consensus 260 ~pdi~t~sK~~~~G~~~G~~~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~ 339 (429)
T 4e77_A 260 IPDLTCLGKIIGGGMPVGAFGGRREVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLR 339 (429)
T ss_dssp CCSEEEEEGGGGTTSCCEEEEECHHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHH
T ss_pred CCCeeeecccccCCCCeEEEEECHHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999886532 246689999999999999999999889999999999999999997
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 340 ~~ 341 (429)
T 4e77_A 340 HA 341 (429)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 22
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.90 E-value=1.2e-23 Score=185.72 Aligned_cols=142 Identities=25% Similarity=0.397 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
+++|++.++. .++++++||+||+++++|.+.++++|+++++++ |++|| |+|. ++++++++ +
T Consensus 190 ~~~le~~l~~---~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~-~~~~~~~~--~ 262 (434)
T 2epj_A 190 VEALERVFAE---YGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGL-EGAQGYFN--I 262 (434)
T ss_dssp HHHHHHHHHH---HGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSST-THHHHHHT--C
T ss_pred HHHHHHHHHh---CCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCc-chhhHHhC--C
Confidence 4566666653 235799999999999999999999999999998 99999 8996 78889998 9
Q ss_pred CCchhcccccccCCcccccceecHHHHHhhhcCC-cccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 143 IPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETG-VEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 143 ~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~-~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
.||++++||++++|+|+|++++++++++.+.... ..+.+||++||++|++++++|+.++++++.+++++++++|+++|+
T Consensus 263 ~~di~s~sK~l~~G~~~G~v~~~~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~~~~~~~~~~~l~~~L~ 342 (434)
T 2epj_A 263 EGDIIVLGKIIGGGFPVGAVAGSREVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEEPVYSVSREAAKALEEAAS 342 (434)
T ss_dssp CCSEEEEEGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCeeeecchhcCCcceeeeeecHHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999886522 235689999999999999999999888999999999999999997
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 343 ~~ 344 (434)
T 2epj_A 343 EV 344 (434)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 23
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.90 E-value=2.6e-23 Score=183.03 Aligned_cols=142 Identities=30% Similarity=0.475 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-----------HHhCCccccccchhhhhcCCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-----------VQVGFGRVGTHWWAFQLQGDDII 143 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----------v~tG~GrtG~~~~~~~~~g~~v~ 143 (224)
+++|++.++. .++++++||+||+++++|.+.++++|+++++++ +++|| |+|. ++++++++ +.
T Consensus 186 ~~~le~~l~~---~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~g~~lI~DEv~~g~-~~g~-~~~~~~~~--~~ 258 (424)
T 2e7u_A 186 PEGLREVLKR---RGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEAKAYGVLLIADEVMTGF-RLAF-GGATELLG--LK 258 (424)
T ss_dssp HHHHHHHHHH---HGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHGGGGTCEEEEECTTTTT-TSST-THHHHHHT--CC
T ss_pred HHHHHHHHHh---CCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHcCCEEEEecCcccc-ccch-hHHHHHhC--CC
Confidence 4566666653 235799999999999999999999999999985 99999 9996 78889998 99
Q ss_pred CchhcccccccCCcccccceecHHHHHhhhcCC-cccccCCCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhhh
Q psy6205 144 PDIVTVGKPMGNGHPVAAVITTKEIAKSFQETG-VEYFNTYGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 144 pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~-~~~~~T~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~~l~ 221 (224)
||++++||++++|+|+|++++++++++.+.... ..+.+||++||++|++++++|+.+++ +++.+++++++++++++|+
T Consensus 259 ~di~s~sK~l~~G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~l~~~L~ 338 (424)
T 2e7u_A 259 PDLVTLGKILGGGLPAAAYAGRREIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYYAYLEDLGARLEAGLK 338 (424)
T ss_dssp CSEEEECGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhhhhhhCCcceEEEEEcHHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999886522 23568999999999999999999988 8999999999999999997
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 339 ~~ 340 (424)
T 2e7u_A 339 EV 340 (424)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 24
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.90 E-value=1.9e-23 Score=184.24 Aligned_cols=141 Identities=23% Similarity=0.320 Sum_probs=125.3
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
+++|+++++. +++++++||+||+++++|++.++++|+++++++ |++|| |+|. ++++++++ +
T Consensus 187 ~~~le~~l~~---~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~-~~~~~~~~--~ 259 (429)
T 3k28_A 187 LESVKYAFEQ---FGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAY-NCGQGYYG--V 259 (429)
T ss_dssp HHHHHHHHHH---HGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSST-THHHHHHT--C
T ss_pred HHHHHHHHHh---CCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCc-chHHHHhC--C
Confidence 5666666653 456899999999999999999999999999999 99999 9997 78899998 9
Q ss_pred CCchhcccccccCCcccccceecHHHHHhhhcCC-cccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 143 IPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETG-VEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 143 ~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~-~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
.||++|+||++++|+|+|++++++++++.+.... ..+.+||++||++|++++++|+.++ +++.+++++++++++++|+
T Consensus 260 ~~di~t~sK~~~~G~~iG~~~~~~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~-~~~~~~~~~~~~~l~~~L~ 338 (429)
T 3k28_A 260 TPDLTCLGKVIGGGLPVGAYGGKAEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT-PESYVEFERKAEMLEAGLR 338 (429)
T ss_dssp CCSEEEECGGGGTTSCCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHH
T ss_pred CCceehhhhhhcCCCCeEEEEEcHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999886432 2366899999999999999999987 7899999999999999997
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 339 ~~ 340 (429)
T 3k28_A 339 KA 340 (429)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 25
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.89 E-value=5.1e-23 Score=181.19 Aligned_cols=142 Identities=24% Similarity=0.324 Sum_probs=126.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
+++|+++++ ++++++++|++||+++++|.+.++++|+++++++ +++|| |+|. ++++++++ +
T Consensus 186 ~~~le~~l~---~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~-~~~~~~~~--~ 258 (427)
T 3fq8_A 186 LEAVKALFA---ENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAY-GGVQEKFG--V 258 (427)
T ss_dssp HHHHHHHHH---HSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBT-THHHHHTT--C
T ss_pred HHHHHHHHH---hCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCc-chhhHhcC--C
Confidence 456666665 3567899999999999999999999999999999 99999 9997 78899998 9
Q ss_pred CCchhcccccccCCcccccceecHHHHHhhhcC-CcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 143 IPDIVTVGKPMGNGHPVAAVITTKEIAKSFQET-GVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 143 ~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~-~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
.||++++||++++|+|+|++++++++++.+... ...+.+||++||+++++++++|+.++++++.+++++++++++++|+
T Consensus 259 ~~di~t~sK~~~~G~~~G~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~ 338 (427)
T 3fq8_A 259 TPDLTTLGKIIGGGLPVGAYGGKREIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLL 338 (427)
T ss_dssp CCSEEEECGGGGTTSSCEEEEECHHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHH
T ss_pred CCChhhhhhhhhCCcceEEEEEcHHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999988643 1246789999999999999999999889999999999999999997
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 339 ~~ 340 (427)
T 3fq8_A 339 AI 340 (427)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 26
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.89 E-value=5.4e-23 Score=181.64 Aligned_cols=142 Identities=32% Similarity=0.493 Sum_probs=127.8
Q ss_pred HHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCC
Q psy6205 74 YAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDD 141 (224)
Q Consensus 74 ~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~ 141 (224)
.+++|++.++ ..+.+++++||+||+++++|.+.++++|+++++++ +++||||+|+ ++++++++
T Consensus 186 d~~~le~~l~--~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~-~~~~~~~~-- 260 (439)
T 3dxv_A 186 ILTLLTEKLA--AVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGR-LHCFEHEG-- 260 (439)
T ss_dssp HHHHHHHHHH--TSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSS-SSGGGGTT--
T ss_pred HHHHHHHHHH--hcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCch-hhHHHhcC--
Confidence 4677777764 23567899999999999999999999999999998 9999999997 78889998
Q ss_pred CCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 142 IIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 142 v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
+.||++++||++++|+|+|++++++++++.+... .+.+|| +||+++++++++|+.++++++.+++++++++++++|+
T Consensus 261 ~~~di~s~sK~~~~G~riG~~~~~~~~~~~~~~~--~~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~ 337 (439)
T 3dxv_A 261 FVPDILVLGKGLGGGLPLSAVIAPAEILDCASAF--AMQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLS 337 (439)
T ss_dssp CCCSEEEECGGGGTTSCCEEEEEEHHHHTSCSSS--SCCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEcchhcCCcceEEEEECHHHHhhhcCC--CcCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999988654 567899 9999999999999999889999999999999999997
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 338 ~~ 339 (439)
T 3dxv_A 338 EL 339 (439)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 27
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.89 E-value=4.6e-23 Score=184.73 Aligned_cols=139 Identities=27% Similarity=0.415 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCC
Q psy6205 74 YAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDD 141 (224)
Q Consensus 74 ~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~ 141 (224)
++++|++.++.......++++||+||+++++|+++|+++|++.|+++ ||+||||+|. +|+++++|
T Consensus 241 d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~-~~~~~~~g-- 317 (472)
T 1ohv_A 241 CLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGK-FWAHEHWG-- 317 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSGGGGGC--
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCC-chhccccC--
Confidence 56777777753211112799999999999999999999999999999 9999999997 78999998
Q ss_pred CC--Cchhccccc-ccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Q psy6205 142 II--PDIVTVGKP-MGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHT 218 (224)
Q Consensus 142 v~--pDi~~~~K~-l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~ 218 (224)
+. ||++||||+ +|||+++ ++++. .+. ...+++||++||++|++++++|++++++++.+++++++++|++
T Consensus 318 v~~~~Di~t~sK~~l~GG~~~-----~~~~~-~~~--~~~~~~T~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~ 389 (472)
T 1ohv_A 318 LDDPADVMTFSKKMMTGGFFH-----KEEFR-PNA--PYRIFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLT 389 (472)
T ss_dssp CSSCCSEEEECGGGSSEEEEE-----CGGGS-CSS--SSSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEccccccCCccC-----chhhc-ccc--cccccCccCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 86 999999999 8988753 55542 121 2246789999999999999999999888999999999999999
Q ss_pred hhhhc
Q psy6205 219 PKKEN 223 (224)
Q Consensus 219 ~l~~l 223 (224)
+|+++
T Consensus 390 ~L~~l 394 (472)
T 1ohv_A 390 GLLDL 394 (472)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99864
No 28
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.89 E-value=7.3e-23 Score=182.07 Aligned_cols=142 Identities=27% Similarity=0.420 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcC
Q psy6205 72 VKYAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQG 139 (224)
Q Consensus 72 ~~~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g 139 (224)
..++++|++.++. +.+++++||+||+++++|++.++++|+++++++ ||+||||+|. +|++++++
T Consensus 215 ~~~~~~le~~i~~---~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~-~~~~~~~~ 290 (449)
T 2cjg_A 215 AEALRQARAAFET---RPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGT-AWAYQQLD 290 (449)
T ss_dssp HHHHHHHHHHHHH---STTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSTHHHHT
T ss_pred HHHHHHHHHHHHh---cCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCc-ceeecccC
Confidence 3456777777753 346899999999999999999999999999999 9999999997 78899998
Q ss_pred CCCCCchhcccccccCCcccccceecHHHHHhhhc---CCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Q psy6205 140 DDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQE---TGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQL 216 (224)
Q Consensus 140 ~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~---~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l 216 (224)
+.||++|+||++ |+|++++++++++.+.+ ....+.+||++||+++++++++|+.++++++.+++++++++|
T Consensus 291 --~~~di~t~sK~l----~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l 364 (449)
T 2cjg_A 291 --VAPDIVAFGKKT----QVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYL 364 (449)
T ss_dssp --CCCSEEEECGGG----SSEEEEECGGGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred --CCceEEEecCcc----cEEEEEECHHHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 999999999999 99999999999886322 112456899999999999999999998889999999999999
Q ss_pred HHhhhhc
Q psy6205 217 HTPKKEN 223 (224)
Q Consensus 217 ~~~l~~l 223 (224)
+++|+++
T Consensus 365 ~~~L~~l 371 (449)
T 2cjg_A 365 RARLDEL 371 (449)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999864
No 29
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.87 E-value=2.1e-22 Score=177.53 Aligned_cols=129 Identities=34% Similarity=0.602 Sum_probs=116.5
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~ 157 (224)
+++++|++||+++.+|+++++++++++++++ +++||||+|+ ++++++++ +.||+++++|++++|+
T Consensus 200 ~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~-~~~~~~~~--~~~diit~sK~l~~G~ 276 (420)
T 2pb2_A 200 DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGD-LFAYMHYG--VTPDILTSAKALGGGF 276 (420)
T ss_dssp TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSHHHHHT--CCCSEEEECGGGGTTS
T ss_pred cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCc-HHHHHhcC--CCCCeEEecccccCCC
Confidence 4789999999999999999999999999998 9999999997 77888898 9999999999999999
Q ss_pred ccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+|++++++++++.+... .+.+||++||+++++++++|+.++++++.+++++++++|+++|+++
T Consensus 277 ~iG~~~~~~~l~~~l~~~--~~~~t~~~~~~~~aa~~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~ 340 (420)
T 2pb2_A 277 PVSAMLTTQEIASAFHVG--SHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQQFVQHLQAI 340 (420)
T ss_dssp CCEEEEECHHHHTTCC------CCEECCCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEhHHHHHhhcCC--CcCcccCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHH
Confidence 999999999998877543 4678999999999999999999988899999999999999999764
No 30
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.87 E-value=3.5e-22 Score=173.93 Aligned_cols=129 Identities=32% Similarity=0.581 Sum_probs=119.4
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~ 157 (224)
+++++|++||+++++|.+.++++|+++++++ +++||||+|. ++++++++ +.||++|+||++++|+
T Consensus 178 ~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~-~~~~~~~~--~~~d~~t~sK~~~~G~ 254 (395)
T 3nx3_A 178 EKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGK-FFAYEHAQ--ILPDIMTSAKALGCGL 254 (395)
T ss_dssp TTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGGT--CCCSEEEECGGGTTTS
T ss_pred CCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCc-chhHHhcC--CCCCEEEecccccCCC
Confidence 5789999999999999999999999999998 8999999997 78899998 9999999999999999
Q ss_pred ccccceecHHH-HHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITTKEI-AKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~~~i-~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+|++++++++ ++.+... .+.+||++||+++++++++|+.++++++.+++++++++++++|+++
T Consensus 255 ~~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~ 319 (395)
T 3nx3_A 255 SVGAFVINQKVASNSLEAG--DHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDEL 319 (395)
T ss_dssp CCEEEEECHHHHHHHSCTT--CCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEchhhhhhhcCCc--ccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 8887643 5678999999999999999999988899999999999999998753
No 31
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.87 E-value=1.8e-22 Score=179.18 Aligned_cols=141 Identities=23% Similarity=0.341 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
+++|++.++. +++++++||+||+++++|++.++++|+++|+++ |++|| |+|. ++++++++ +
T Consensus 188 ~~~le~~l~~---~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~-~~~~~~~~--~ 260 (453)
T 2cy8_A 188 IEGMREVFAN---HGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGN-HGMQALLD--V 260 (453)
T ss_dssp HHHHHHHHHH---HGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCT-THHHHHHT--C
T ss_pred HHHHHHHHHh---cCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCc-hhhhHHhC--C
Confidence 4566666653 335789999999999999999999999999999 99999 9996 78889998 9
Q ss_pred CCchhcccccccCCcccccceecHHHHHhhhc---CCcccccCCCCcHHHHHHHHHHHHH-HhhhhHHHHHHHHHHHHHH
Q psy6205 143 IPDIVTVGKPMGNGHPVAAVITTKEIAKSFQE---TGVEYFNTYGGNPVSCAVANAVMEV-LETENLREHALDVGNQLHT 218 (224)
Q Consensus 143 ~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~---~~~~~~~T~~~~p~~~aaa~a~l~~-~~~~~l~~~~~~~g~~l~~ 218 (224)
.||++++||++++|+|+|++++++++++.+.. ....+.+||++||+++++++++|+. + ++++.+++++++++|++
T Consensus 261 ~~di~s~sK~l~~G~~~G~v~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~-~~~~~~~~~~~~~~l~~ 339 (453)
T 2cy8_A 261 QPDLTCLAKASAGGLPGGILGGREDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL-EDDVCAKINDLGQFARE 339 (453)
T ss_dssp CCSEEEEEGGGGTTSSCEEEEECHHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH-HTTHHHHHHHHHHHHHH
T ss_pred CCcEEEEChhhhCCcceEEEechHHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998865 1123567999999999999999999 8 78899999999999999
Q ss_pred hhhhc
Q psy6205 219 PKKEN 223 (224)
Q Consensus 219 ~l~~l 223 (224)
+|+++
T Consensus 340 ~L~~~ 344 (453)
T 2cy8_A 340 AMNHL 344 (453)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99764
No 32
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.86 E-value=5.7e-21 Score=168.07 Aligned_cols=140 Identities=28% Similarity=0.539 Sum_probs=117.7
Q ss_pred HHHHHH-HHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCC
Q psy6205 74 YAQDVQ-DLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGD 140 (224)
Q Consensus 74 ~~~~l~-~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~ 140 (224)
.+++|+ +.++.. ..++++++|++||+++..|.+.++++|+++++++ +++||||+|. ++++++++
T Consensus 195 ~~~~l~~~~i~~~-~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~-~~~~~~~~- 271 (419)
T 2eo5_A 195 VIEFIEDYIFVNL-VPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGK-LFAIENFN- 271 (419)
T ss_dssp HHHHHHHTHHHHT-CCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGGT-
T ss_pred HHHHHHHHHHhhc-cCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcc-hhhHHhcC-
Confidence 466777 666531 1125789999999999999999999999999998 9999999997 67888887
Q ss_pred CCCCchhcccccccCC-cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHh
Q psy6205 141 DIIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTP 219 (224)
Q Consensus 141 ~v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~ 219 (224)
+.||++|+||++++| +|+|+++++++++ .+ .. .+.+||++||++++++.++|+.+++ +.++++++.++|.++
T Consensus 272 -~~~d~~t~sK~~~~G~~riG~~~~~~~~~-~~-~~--~~~~t~~~n~~~~~aa~aal~~~~~--~~~~~~~~~~~l~~~ 344 (419)
T 2eo5_A 272 -TVPDVITLAKALGGGIMPIGATIFRKDLD-FK-PG--MHSNTFGGNALACAIGSKVIDIVKD--LLPHVNEIGKIFAEE 344 (419)
T ss_dssp -CCCSEEEECGGGGTTTSCCEEEEEEGGGC-CC---------CCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
T ss_pred -CCCCEEEecccccCCccceEEEEEchHhh-cC-Cc--ccCCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHH
Confidence 999999999999999 9999999999988 66 32 4668999999999999999999865 899999999999999
Q ss_pred hhhc
Q psy6205 220 KKEN 223 (224)
Q Consensus 220 l~~l 223 (224)
|+++
T Consensus 345 L~~~ 348 (419)
T 2eo5_A 345 LQGL 348 (419)
T ss_dssp HTTS
T ss_pred HHHh
Confidence 9764
No 33
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.85 E-value=8.9e-21 Score=166.97 Aligned_cols=143 Identities=29% Similarity=0.485 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccc-cCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESL-QSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDD 141 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv-~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~ 141 (224)
+++|++.++. +++++++|++||+ ++..|.+.++++++++++++ +++||||+|. ++++++++
T Consensus 191 ~~~l~~~l~~---~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~-~~~~~~~~-- 264 (429)
T 1s0a_A 191 MVGFARLMAA---HRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGK-LFACEHAE-- 264 (429)
T ss_dssp GHHHHHHHHH---HTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGGT--
T ss_pred HHHHHHHHHh---CCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccch-HHHhhhcC--
Confidence 4666666653 3457899999999 99999999999999999998 9999999997 67888887
Q ss_pred CCCchhcccccccCC-cccccceecHHHHHhhhcCC-c--ccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q psy6205 142 IIPDIVTVGKPMGNG-HPVAAVITTKEIAKSFQETG-V--EYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLH 217 (224)
Q Consensus 142 v~pDi~~~~K~l~~G-~p~~av~~~~~i~~~~~~~~-~--~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~ 217 (224)
+.||++++||++++| +|+|++++++++++.+.... . .+.+||++||++++++.++|+.++++++.++++++.++|+
T Consensus 265 ~~~d~~t~sK~l~~G~~~iG~~~~~~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~ 344 (429)
T 1s0a_A 265 IAPDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILESGDWQQQVADIEVQLR 344 (429)
T ss_dssp CCCSEEEECGGGGTSSSCCEEEEECHHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEecccccCCCccceEEEeCHHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999999999999 89999999999999886521 1 2457999999999999999999988889999999999999
Q ss_pred Hhhhhc
Q psy6205 218 TPKKEN 223 (224)
Q Consensus 218 ~~l~~l 223 (224)
++|+++
T Consensus 345 ~~L~~l 350 (429)
T 1s0a_A 345 EQLAPA 350 (429)
T ss_dssp HHHGGG
T ss_pred HHHHHH
Confidence 999874
No 34
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.80 E-value=5.2e-19 Score=154.97 Aligned_cols=144 Identities=28% Similarity=0.460 Sum_probs=124.5
Q ss_pred HHHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCC
Q psy6205 74 YAQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDD 141 (224)
Q Consensus 74 ~~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~ 141 (224)
.+++|++.++.. .+++++++|++||++++.|.+.+++++++++.++ +++||+++|. +++++.++
T Consensus 183 d~~~l~~~l~~~-~~~~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~-~~~~~~~~-- 258 (426)
T 1sff_A 183 AIASIHRIFKND-AAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGT-LFAMEQMG-- 258 (426)
T ss_dssp HHHHHHHHHHHT-CCGGGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGTT--
T ss_pred HHHHHHHHHHhc-cCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccc-hhhhhhcC--
Confidence 356677666531 1235789999999999999999999999999998 8999999997 67788887
Q ss_pred CCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 142 IIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 142 v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
+.||++++||.+++|+++|++++++++++.+... .+.+||+.||++++++.++|+.++++++.++++++.++++++|+
T Consensus 259 ~~~di~s~sK~~~~GlriG~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~l~~~l~ 336 (426)
T 1sff_A 259 VAPDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPG--GLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLL 336 (426)
T ss_dssp SCCSEEEECGGGGTSSCCEEEEEEHHHHTTSCTT--SBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEcccccCCCceEEEEEcHHHHhhhccC--CcCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999887542 45689999999999999999999888999999999999999987
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 337 ~~ 338 (426)
T 1sff_A 337 AI 338 (426)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 35
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.79 E-value=9.1e-19 Score=151.97 Aligned_cols=129 Identities=36% Similarity=0.666 Sum_probs=119.0
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG- 156 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G- 156 (224)
+++++|++||+++..|.+.++++|++++.++ +++|||++|. +++++.++ +.||++++||+|+||
T Consensus 181 ~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~-~~~~~~~~--~~~d~~~~SK~l~gG~ 257 (392)
T 3ruy_A 181 PNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGK-VFACDWDN--VTPDMYILGKALGGGV 257 (392)
T ss_dssp TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSS-SSGGGGGT--CCCSEEEECGGGGTTT
T ss_pred cCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcccc-chhhhccC--CCCCEEEEchhhhCCh
Confidence 5789999999999999999999999999998 8999999997 78888888 999999999999999
Q ss_pred cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 157 HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 157 ~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++|++++++++++.+... .+.+||+.||++++++.++|+.++++++.++++++.++|++.|+++
T Consensus 258 ~~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 322 (392)
T 3ruy_A 258 FPISCAAANRDILGVFEPG--SHGSTFGGNPLACAVSIAALEVLEEEKLTERSLQLGEKLVGQLKEI 322 (392)
T ss_dssp SCCEEEEECHHHHTTCCTT--SSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTC
T ss_pred hhhEEEEECHHHHhhhccC--CcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999887643 5668999999999999999999988899999999999999999875
No 36
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.77 E-value=1.4e-18 Score=151.19 Aligned_cols=129 Identities=30% Similarity=0.530 Sum_probs=118.4
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~ 157 (224)
+++++|++||+.+.+|++++++++++++.++ +++|||++|. .++.+.++ +.||++|++|.+++|+
T Consensus 182 ~~~~~v~~~p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~-~~~~~~~~--~~~d~~t~sK~~~~G~ 258 (406)
T 4adb_A 182 DSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGE-LYAYMHYG--VTPDLLTTAKALGGGF 258 (406)
T ss_dssp TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSHHHHHT--CCCSEEEECGGGGTTS
T ss_pred CCeEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch-hHHHHhcC--CCCCEEEechhhcCCC
Confidence 5789999999999999999999999999998 8899999997 67888898 9999999999999889
Q ss_pred ccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
++|++++++++++.+... .+.+||++||++++++.++|+.++++++.++++++.+++.++|+++
T Consensus 259 r~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~ 322 (406)
T 4adb_A 259 PVGALLATEECARVMTVG--THGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTI 322 (406)
T ss_dssp CCEEEEECHHHHHTCCTT--SSCCSSTTCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcHHHHhhhccC--CcCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988643 4668999999999999999999988899999999999999999764
No 37
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.70 E-value=1e-16 Score=139.12 Aligned_cols=129 Identities=31% Similarity=0.534 Sum_probs=115.1
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~ 157 (224)
+++++|+++|+++..|.+.+++++++++.++ +++||+++|+ .+.++.++ +.||+++++|.+++|+
T Consensus 184 ~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~-~~~~~~~~--~~~d~~s~sK~~~~g~ 260 (395)
T 1vef_A 184 EETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGK-RFAFEHFG--IVPDILTLAKALGGGV 260 (395)
T ss_dssp TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSTHHHHT--CCCSEEEECGGGGTTS
T ss_pred cCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCc-hhHhhhcC--CCCCEEEEcccccCCC
Confidence 3689999999999899999999999999988 8889999996 66777887 8899999999999999
Q ss_pred ccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
++|++++++++++.+... .+.+||+.|+++++++.++|+.++++++.++++++.+++.++|+++
T Consensus 261 ~~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l~~~l~~~ 324 (395)
T 1vef_A 261 PLGVAVMREEVARSMPKG--GHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWFMEKLRAI 324 (395)
T ss_dssp SCEEEEEEHHHHHTSCTT--SSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTS
T ss_pred ceEEEEehHHHHhhhccC--CcCCCcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999998877542 3567999999999999999999987889999999999999999875
No 38
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.67 E-value=1.3e-16 Score=138.68 Aligned_cols=128 Identities=33% Similarity=0.590 Sum_probs=113.0
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~ 157 (224)
+++++|++||+++..|.+.+++++++++.++ +++||+++|+ .+..+.++ +.||+++++|.+++|+
T Consensus 182 ~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~-~~~~~~~~--~~~d~~s~sK~~~~G~ 258 (397)
T 2ord_A 182 EDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGK-LFAYQKYG--VVPDVLTTAKGLGGGV 258 (397)
T ss_dssp TTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSHHHHHT--CCCSEEEECGGGGTTS
T ss_pred cCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCcc-chhhhhhC--CCCCeeeeccccCCCc
Confidence 4789999999999999988889999999888 8899999997 66778887 8899999999999999
Q ss_pred ccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
++|+++++++++ .+... .+..||+.||++++++.++|+.++++++.++++++.++|.+.|+++
T Consensus 259 r~G~~~~~~~~~-~l~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (397)
T 2ord_A 259 PIGAVIVNERAN-VLEPG--DHGTTFGGNPLACRAGVTVIKELTKEGFLEEVEEKGNYLMKKLQEM 321 (397)
T ss_dssp CCEEEEECSTTC-CCCTT--SSCCSSTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEchHhc-ccCCC--CcCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 999999998876 55432 4567999999999999999999987889999999999999998764
No 39
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.63 E-value=1.5e-15 Score=130.57 Aligned_cols=127 Identities=31% Similarity=0.596 Sum_probs=112.0
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhcccccccCCc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~ 157 (224)
+++++|+++|.++..|.+.+++++++++.++ +++|||+++. .+..+.++ +.||++++||.+++|+
T Consensus 171 ~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~--~~~d~~s~SK~~~~g~ 247 (375)
T 2eh6_A 171 EETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGE-FYAYQHFN--LKPDVIALAKGLGGGV 247 (375)
T ss_dssp TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGGT--CCCSEEEECGGGGTTS
T ss_pred CCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc-chhhhhcC--CCCCEEEEcccccCCC
Confidence 4789999999999999999999999999888 8889999986 56677787 8899999999999999
Q ss_pred ccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
++|++++++++++.+... .+..||+.|+++++++.++|+.++ ++.++++++.++|.+.|+++
T Consensus 248 ~~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~ 309 (375)
T 2eh6_A 248 PIGAILAREEVAQSFTPG--SHGSTFGGNPLACRAGTVVVDEVE--KLLPHVREVGNYFKEKLKEL 309 (375)
T ss_dssp CCEEEEEEHHHHTTCCTT--SCCCSSTTCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEEcHHHHhhhcCC--CCCCCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHH
Confidence 999999999998877542 356789999999999999999886 78899999999999999875
No 40
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.45 E-value=3e-13 Score=118.53 Aligned_cols=139 Identities=12% Similarity=0.079 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhh-----h
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQ-----L 137 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~-----~ 137 (224)
+++|++.+.. +++++|++++.++.+| ..++++.+++++++ ++++|+++|.....+. .
T Consensus 183 ~~~le~~i~~-----~~~~~vil~~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 256 (421)
T 3l8a_A 183 FEQLEKDIID-----NNVKIYLLCSPHNPGG-RVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASY 256 (421)
T ss_dssp HHHHHHHHHH-----TTEEEEEEESSBTTTT-BCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTG
T ss_pred HHHHHHHhhc-----cCCeEEEECCCCCCCC-CcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchh
Confidence 4566666642 4688999999999999 56677779999888 9999999985222222 2
Q ss_pred cCCCCCCchhccccccc-CCcccccceec-HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHH
Q psy6205 138 QGDDIIPDIVTVGKPMG-NGHPVAAVITT-KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVG 213 (224)
Q Consensus 138 ~g~~v~pDi~~~~K~l~-~G~p~~av~~~-~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g 213 (224)
.+ ..+++.+++|+++ +|+|+|+++++ +++++.+... .....++++||++++++.++|+..++ +++.++++++.
T Consensus 257 ~~--~~i~~~s~sK~~g~~G~~~G~~~~~~~~l~~~~~~~-~~~~~~~~~n~~~~~a~~aal~~~~~~~~~~~~~~~~~~ 333 (421)
T 3l8a_A 257 KD--FTIILSSATKTFNIAGTKNSFAIIQNESLRRKFQYR-QLANNQHEVPTVGMIATQAAFQYGKPWLEELKTVIEGNI 333 (421)
T ss_dssp GG--TEEEEECSHHHHTCGGGCCEEEECCSHHHHHHHHHH-HHHTTCSCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred cC--cEEEEEeChhhccCchhheEeEEcCCHHHHHHHHHH-HHhcccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 33 5677889999998 78999999998 8999888653 12345678999999999999996542 46777788888
Q ss_pred HHHHHhhhh
Q psy6205 214 NQLHTPKKE 222 (224)
Q Consensus 214 ~~l~~~l~~ 222 (224)
++|.+.|++
T Consensus 334 ~~l~~~L~~ 342 (421)
T 3l8a_A 334 KLVIKELEA 342 (421)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 888888875
No 41
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.41 E-value=6.1e-13 Score=116.97 Aligned_cols=140 Identities=21% Similarity=0.209 Sum_probs=109.6
Q ss_pred HHHHHHHHHHHccCCC-CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhC--CccccccchhhhhcCCCCC
Q psy6205 75 AQDVQDLIEAMGRNGK-RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVG--FGRVGTHWWAFQLQGDDII 143 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~-~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG--~GrtG~~~~~~~~~g~~v~ 143 (224)
+++|++.++. ..+ ++++|++|++++..|.+.+.++..+.+++. ++++ ++++|. +..++++ +.
T Consensus 180 ~~~le~~l~~---~~~~~~~~v~~~~~~n~tG~~~~l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~--~~~~~~~--~~ 252 (427)
T 2w8t_A 180 VEDLDKRLGR---LPKEPAKLVVLEGVYSMLGDIAPLKEMVAVAKKHGAMVLVDEAHSMGFFGPNGR--GVYEAQG--LE 252 (427)
T ss_dssp HHHHHHHHHT---SCSSSCEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSC--CHHHHTT--CT
T ss_pred HHHHHHHHHh---ccCCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCCC--chHhhcC--CC
Confidence 4566666652 223 789999999999999988855555555554 7776 466675 3567787 88
Q ss_pred Cc----hhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHH
Q psy6205 144 PD----IVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLHT 218 (224)
Q Consensus 144 pD----i~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~ 218 (224)
|| +.+++|.+| .|.|++++++++++.+......+.+|++.||+++++++++|+.+++ +++.++++++.++|++
T Consensus 253 ~~~di~~~s~sK~~g--~~gG~v~~~~~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~ 330 (427)
T 2w8t_A 253 GQIDFVVGTFSKSVG--TVGGFVVSNHPKFEAVRLACRPYIFTASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHG 330 (427)
T ss_dssp TCCSEEEEESSSTTC--SCCEEEEECCTTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHH
T ss_pred cCCcEEEecchhhhc--cCCCEEEeCHHHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 88 778999996 4568899999999988765334557889999999999999999976 7899999999999999
Q ss_pred hhhhc
Q psy6205 219 PKKEN 223 (224)
Q Consensus 219 ~l~~l 223 (224)
.|+++
T Consensus 331 ~L~~~ 335 (427)
T 2w8t_A 331 GLKAM 335 (427)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 99864
No 42
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.28 E-value=1.1e-11 Score=108.03 Aligned_cols=139 Identities=17% Similarity=0.189 Sum_probs=106.2
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhC--CccccccchhhhhcCCCC--
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVG--FGRVGTHWWAFQLQGDDI-- 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG--~GrtG~~~~~~~~~g~~v-- 142 (224)
+++|++.++. .+.++|+++++++..|.+.+.++..+.+++. ++++ +|++|. .+. +.++ +
T Consensus 175 ~~~le~~l~~-----~~~~~vi~~~~~nptG~~~~l~~l~~la~~~~~~li~De~~~~g~~g~~g~-~~~-~~~~--~~~ 245 (409)
T 3kki_A 175 CDHLRMLIQR-----HGPGIIVVDSIYSTLGTIAPLAELVNISKEFGCALLVDESHSLGTHGPNGA-GLL-AELG--LTR 245 (409)
T ss_dssp HHHHHHHHHH-----HCSCEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGC-CHH-HHHT--CGG
T ss_pred HHHHHHHHHh-----cCCeEEEECCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCC-cch-hhcC--CCC
Confidence 4566666653 2358999999999999888855555555555 8888 899996 444 6666 6
Q ss_pred CCch--hcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHh
Q psy6205 143 IPDI--VTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLHTP 219 (224)
Q Consensus 143 ~pDi--~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~~ 219 (224)
.+|| .+++|++++| .|++++++++++.+......+.++...+|+++++++++|+.+++ +.+.++++++.++|.+.
T Consensus 246 ~~di~~~s~sK~~~~~--gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~ 323 (409)
T 3kki_A 246 EVHFMTASLAKTFAYR--AGAIWCNNEVNRCVPFISYPAIFSSTLLPYEAAGLETTLEIIESADNRRQHLDRMARKLRIG 323 (409)
T ss_dssp GCSEEEEESSSTTCSS--CEEEEESSSGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeecchhhCCC--ceEEEECHHHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 5777 6799999876 47799999998877653223334555899999999999999965 58889999999999999
Q ss_pred hhhcC
Q psy6205 220 KKENN 224 (224)
Q Consensus 220 l~~l~ 224 (224)
|++++
T Consensus 324 L~~~g 328 (409)
T 3kki_A 324 LSQLG 328 (409)
T ss_dssp HHTTT
T ss_pred HHHcC
Confidence 98753
No 43
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.24 E-value=4.1e-11 Score=103.37 Aligned_cols=143 Identities=22% Similarity=0.271 Sum_probs=110.3
Q ss_pred HHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HH-hCC-ccccccchhhhhcCCCC--C
Q psy6205 76 QDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQ-VGF-GRVGTHWWAFQLQGDDI--I 143 (224)
Q Consensus 76 ~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~-tG~-GrtG~~~~~~~~~g~~v--~ 143 (224)
++|++.++.....+.++++|++++.+...|.+.+.++..+.+++. ++ .|+ +++|. +..+.++ + .
T Consensus 160 ~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~--~~~~ 235 (399)
T 3tqx_A 160 GDLEAKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGR--GTPEYCG--VADR 235 (399)
T ss_dssp THHHHHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSC--CHHHHHT--CTTC
T ss_pred HHHHHHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCC--chHHhhC--CCCC
Confidence 456666664322233799999999999999988855555555554 66 675 77775 3567776 6 7
Q ss_pred Cchh--cccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHH-h-hhhHHHHHHHHHHHHHHh
Q psy6205 144 PDIV--TVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVL-E-TENLREHALDVGNQLHTP 219 (224)
Q Consensus 144 pDi~--~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~-~-~~~l~~~~~~~g~~l~~~ 219 (224)
||++ +++|.++ |.|.|++++++++++.+......+..|.+.++++++++.++++.+ + .+++.++++++.+++.+.
T Consensus 236 ~di~~~s~sK~~~-g~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 314 (399)
T 3tqx_A 236 VDILTGTLGKALG-GASGGYTSGHKEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAG 314 (399)
T ss_dssp CSEEEEESSSSSC-SSCCEEEEECHHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEecchHhcc-cCceEEEEcCHHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 9998 8999998 677789999999999887543334457789999999999999998 4 468899999999999999
Q ss_pred hhhc
Q psy6205 220 KKEN 223 (224)
Q Consensus 220 l~~l 223 (224)
|+++
T Consensus 315 L~~~ 318 (399)
T 3tqx_A 315 MEKL 318 (399)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 9875
No 44
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.18 E-value=1.7e-10 Score=99.91 Aligned_cols=144 Identities=20% Similarity=0.285 Sum_probs=106.8
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HH-hCC-ccccccchhhhhcCCCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQ-VGF-GRVGTHWWAFQLQGDDIIP 144 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~-tG~-GrtG~~~~~~~~~g~~v~p 144 (224)
.++|++.++.....+.++++|++++.+...|.+.+.++..+.+++. ++ +|+ +++|+ .+ .+.++ +.|
T Consensus 161 ~~~l~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~-~~-~~~~~--~~~ 236 (401)
T 1fc4_A 161 MQELEARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGR-GS-HEYCD--VMG 236 (401)
T ss_dssp HHHHHHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSC-CH-HHHTT--CTT
T ss_pred HHHHHHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCC-cc-HHHcC--CCc
Confidence 4566666653211122688999999999999888855555555554 77 588 56786 33 45565 654
Q ss_pred --chh--cccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHh
Q psy6205 145 --DIV--TVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLHTP 219 (224)
Q Consensus 145 --Di~--~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~~ 219 (224)
|++ +++|.++|+. .|++++++++++.+......+.+|++.|+++++++.++|+.+++ +++.++++++.++|.+.
T Consensus 237 ~~di~~~s~sK~~~~~~-gG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 315 (401)
T 1fc4_A 237 RVDIITGTLGKALGGAS-GGYTAARKEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQ 315 (401)
T ss_dssp CCSEEEEESSSTTCSSS-CEEEEECHHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEecchhhccCCC-CEEEEcCHHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 777 8999997664 48899999999988653223445889999999999999999864 68899999999999999
Q ss_pred hhhc
Q psy6205 220 KKEN 223 (224)
Q Consensus 220 l~~l 223 (224)
|+++
T Consensus 316 L~~~ 319 (401)
T 1fc4_A 316 MSAA 319 (401)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 9875
No 45
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.10 E-value=4.5e-10 Score=96.33 Aligned_cols=127 Identities=12% Similarity=0.097 Sum_probs=98.4
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhccccccc-CC
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMG-NG 156 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~-~G 156 (224)
+++.+|++++.+...|.+. ++++++++.++ ++++|++.+. ....+.++ ..+++.+++|.++ .|
T Consensus 153 ~~~~~v~~~~~~nptG~~~-~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~-~~~~~~~~--~~i~~~s~sK~~~~~G 228 (375)
T 3op7_A 153 PTTKMICINNANNPTGAVM-DRTYLEELVEIASEVGAYILSDEVYRSFSELDV-PSIIEVYD--KGIAVNSLSKTYSLPG 228 (375)
T ss_dssp TTCCEEEEESSCTTTCCCC-CHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCC-CCHHHHCT--TEEEEEESSSSSSCGG
T ss_pred cCCeEEEEcCCCCCCCCCC-CHHHHHHHHHHHHHcCCEEEEEcccccccccCC-CchhhhcC--CEEEEeEChhhcCCcc
Confidence 4678999999888888655 66778888887 7778776643 33455565 7788999999998 78
Q ss_pred cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhh
Q psy6205 157 HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 157 ~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~ 222 (224)
+++|++++++++++.+... ...++++.++++++++.++|+..++ ++..++++++.+++.+.|++
T Consensus 229 ~r~G~v~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~ 294 (375)
T 3op7_A 229 IRIGWVAANHQVTDILRDY--RDYTMICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEE 294 (375)
T ss_dssp GCCEEEECCHHHHHHHTTT--GGGTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEeCHHHHHHHHHH--HhhhccCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999988654 4557888999999999999986543 34555567777777777765
No 46
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.08 E-value=8e-10 Score=95.07 Aligned_cols=140 Identities=19% Similarity=0.249 Sum_probs=104.5
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HH-hCC-ccccccchhhhhcCCCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQ-VGF-GRVGTHWWAFQLQGDDIIP 144 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~-tG~-GrtG~~~~~~~~~g~~v~p 144 (224)
.++|++.++ +..++.++|++++.+...|.+.+.++..+.+++. ++ .|+ +++|. .+ .+.++ ..|
T Consensus 155 ~~~l~~~l~---~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~-~~-~~~~~--~~~ 227 (384)
T 1bs0_A 155 VTHLARLLA---SPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGR-GS-CWLQK--VKP 227 (384)
T ss_dssp HHHHHHHHH---SCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGC-CH-HHHTT--CCC
T ss_pred HHHHHHHHH---hcCCCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCC-ch-HHhcC--CCC
Confidence 345665554 2333478999999999999988866666666655 54 464 67775 33 35676 779
Q ss_pred chh--cccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHh
Q psy6205 145 DIV--TVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQLHTP 219 (224)
Q Consensus 145 Di~--~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~~~ 219 (224)
|++ +++|.++. |.|++++++++++.+......+.+|++.|+++++++.++|+.+++ +++.++++++.+++.+.
T Consensus 228 di~~~s~sK~~~~--~GG~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 305 (384)
T 1bs0_A 228 ELLVVTFGKGFGV--SGAAVLCSSTVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAG 305 (384)
T ss_dssp SEEEEESSSTTSS--CCEEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEeeccchhhc--cCcEEEeCHHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence 998 89999973 347789999999888653223446678999999999999999873 47889999999999999
Q ss_pred hhhc
Q psy6205 220 KKEN 223 (224)
Q Consensus 220 l~~l 223 (224)
|+++
T Consensus 306 L~~~ 309 (384)
T 1bs0_A 306 VQDL 309 (384)
T ss_dssp HTTS
T ss_pred HHhc
Confidence 9875
No 47
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.04 E-value=4.4e-10 Score=98.26 Aligned_cols=129 Identities=11% Similarity=0.027 Sum_probs=96.2
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhh----hcCCCCCCchhcccccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQ----LQGDDIIPDIVTVGKPM 153 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~----~~g~~v~pDi~~~~K~l 153 (224)
+++++|+++..+...|.+. ++++++++.++ ++++|+++|....... .++ ..+++.+++|.+
T Consensus 181 ~~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~s~sK~~ 257 (429)
T 1yiz_A 181 EKTKMIIINTPHNPLGKVM-DRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWE--RTITIGSAGKTF 257 (429)
T ss_dssp TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGG--GEEEEEEHHHHH
T ss_pred cCceEEEECCCCCCCCccC-CHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcC--ceEEEecchhcc
Confidence 4678899998888888765 57788888887 8888877664111221 233 566778999999
Q ss_pred c-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHH-----Hhhh----hHHHHHHHHHHHHHHhhhhc
Q psy6205 154 G-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEV-----LETE----NLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 154 ~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~-----~~~~----~l~~~~~~~g~~l~~~l~~l 223 (224)
| .|+++|++++++++++.+... ....||+.|+++++++.++|+. ...+ ++.++++++.++|.+.|+++
T Consensus 258 ~~~G~r~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 335 (429)
T 1yiz_A 258 SLTGWKIGWAYGPEALLKNLQMV--HQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV 335 (429)
T ss_dssp TCGGGCCEEEESCHHHHHHHHHH--HHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcceEEEEeCHHHHHHHHHH--HhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 8 789999999999999988643 3456899999999999999998 4223 34555667777777777653
No 48
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.01 E-value=2.2e-09 Score=92.95 Aligned_cols=140 Identities=22% Similarity=0.262 Sum_probs=101.3
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHh-C-CccccccchhhhhcCCCC--
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQV-G-FGRVGTHWWAFQLQGDDI-- 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~t-G-~GrtG~~~~~~~~~g~~v-- 142 (224)
.++|+++++.. .++++++|++++++...|.+.+.++..+.+++. +++ | ||++|. .+. ..++ +
T Consensus 164 ~~~le~~l~~~--~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~-~~~-~~~~--~~~ 237 (401)
T 2bwn_A 164 VAHLRELIAAD--DPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGA-GVA-ERDG--LMH 237 (401)
T ss_dssp HHHHHHHHHHS--CTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSC-CHH-HHHT--CGG
T ss_pred HHHHHHHHHhh--ccCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCc-eee-eccC--ccc
Confidence 46677777642 224788999999999999988866666666666 666 3 678886 343 5555 4
Q ss_pred CCchh--cccccccC-CcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHH
Q psy6205 143 IPDIV--TVGKPMGN-GHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQL 216 (224)
Q Consensus 143 ~pDi~--~~~K~l~~-G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l 216 (224)
.+|++ +++|+++. | |.+++++++.+.+......+.++.+.+|++++++.++|+.+++ +++.++++++.+++
T Consensus 238 ~~~i~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 314 (401)
T 2bwn_A 238 RIDIFNGTLAKAYGVFG---GYIAASARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVL 314 (401)
T ss_dssp GCSEEEEESSSTTCSCC---EEEEECHHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHH
T ss_pred cCcEEEeechhhccCCC---CEEecCHHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHH
Confidence 34554 89999982 3 4478899998887642222233444578999999999999976 47889999999999
Q ss_pred HHhhhhc
Q psy6205 217 HTPKKEN 223 (224)
Q Consensus 217 ~~~l~~l 223 (224)
.+.|+++
T Consensus 315 ~~~L~~~ 321 (401)
T 2bwn_A 315 KMRLKAL 321 (401)
T ss_dssp HHHHHHH
T ss_pred HHHHHHC
Confidence 9999764
No 49
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=98.98 E-value=2.2e-09 Score=94.11 Aligned_cols=144 Identities=9% Similarity=0.055 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCC-
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDD- 141 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~- 141 (224)
+++|++.++.......++.+|++++.+...|.+. +.+.++++.++ ++++++++|..+.....+..+
T Consensus 175 ~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~ 253 (435)
T 3piu_A 175 ETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTM-TRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDR 253 (435)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCC-CHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhcccc
Confidence 4566666654333345788899998777788755 45557777666 888877777533333333200
Q ss_pred -CC-----Cc----hhccccccc-CCccccccee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--h---hh
Q psy6205 142 -II-----PD----IVTVGKPMG-NGHPVAAVIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--T---EN 204 (224)
Q Consensus 142 -v~-----pD----i~~~~K~l~-~G~p~~av~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~---~~ 204 (224)
+. || +.+++|++| +|+++|++++ ++++.+.+.. +..++..++++++++.++|+..+ + ++
T Consensus 254 ~~d~~~~~~~~~i~i~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 329 (435)
T 3piu_A 254 NCDENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATK----MSSFGLVSSQTQHLLSAMLSDKKLTKNYIAE 329 (435)
T ss_dssp ------CGGGGEEEEEESSSSSCCGGGCEEEEEESCHHHHHHHHH----HGGGSCCCHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred ccccccCCCCCEEEEEeeecccCCCceeEEEEEeCCHHHHHHHHH----HhhcCCCCHHHHHHHHHHhcChHHHHHHHHH
Confidence 11 45 568999998 7899999999 6778777653 23456678898888888886432 1 34
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q psy6205 205 LREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 205 l~~~~~~~g~~l~~~l~~l 223 (224)
..++++++.++|.+.|+++
T Consensus 330 ~~~~~~~~~~~l~~~L~~~ 348 (435)
T 3piu_A 330 NHKRLKQRQKKLVSGLQKS 348 (435)
T ss_dssp HHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 5667778888888888764
No 50
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=98.96 E-value=9e-10 Score=94.72 Aligned_cols=128 Identities=16% Similarity=0.152 Sum_probs=96.9
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCC--ccccccchhhhhcCCCCCCchhccccccc-
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGF--GRVGTHWWAFQLQGDDIIPDIVTVGKPMG- 154 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~--GrtG~~~~~~~~~g~~v~pDi~~~~K~l~- 154 (224)
+++.+|+++..+...|.+. ++++++++.++ ++++| |+.+..++.. ..+ ..+++.+++|.++
T Consensus 151 ~~~~~v~~~~~~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~-~~~--~~~~~~s~sK~~~~ 226 (381)
T 1v2d_A 151 PRTRALLLNTPMNPTGLVF-GERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREF-APE--RTFTVGSAGKRLEA 226 (381)
T ss_dssp TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHH-CTT--TEEEEEEHHHHTTC
T ss_pred cCCEEEEECCCCCCCCCcc-CHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHh-cCC--CEEEEeechhhcCC
Confidence 3578899888877788764 56778888777 77776 3433222222 344 7788889999998
Q ss_pred CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHH--hh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 155 NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVL--ET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 155 ~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~--~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
.|+++|++++++++++.+... ....+|+.++++++++.++|+.. ++ +++.++++++.++|.+.|+++
T Consensus 227 ~G~r~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 297 (381)
T 1v2d_A 227 TGYRVGWIVGPKEFMPRLAGM--RQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRAM 297 (381)
T ss_dssp GGGCCEEEECCTTTHHHHHHH--HHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccceEEEEeCHHHHHHHHHH--HhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 689999999999998887643 33458889999999999999976 33 467788889999999998764
No 51
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=98.92 E-value=3.1e-09 Score=91.22 Aligned_cols=140 Identities=9% Similarity=-0.044 Sum_probs=101.4
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
+++|++.++ ..++.+|+++..+...|.+. +++.++++.++ ++++|.+.|........++ .-
T Consensus 149 ~~~l~~~l~-----~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~ 221 (391)
T 3dzz_A 149 WADLEEKLA-----TPSVRMMVFCNPHNPIGYAW-SEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVD-WD 221 (391)
T ss_dssp HHHHHHHHT-----STTEEEEEEESSBTTTTBCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSC-TT
T ss_pred HHHHHHHHh-----ccCceEEEEECCCCCCCccc-CHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcC-cc
Confidence 455555543 13677888877788888765 45557777776 8888888875334444443 12
Q ss_pred CCc----hhccccccc-CCcccccceec-HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHH
Q psy6205 143 IPD----IVTVGKPMG-NGHPVAAVITT-KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGN 214 (224)
Q Consensus 143 ~pD----i~~~~K~l~-~G~p~~av~~~-~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~ 214 (224)
.|| +.+++|.+| .|+++|+++++ +++++.+... .....+++.|+++++++.++|+..+ -++..++++++.+
T Consensus 222 ~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 300 (391)
T 3dzz_A 222 AKNWVVSLISPSKTFNLAALHAACAIIPNPDLRARAEES-FFLAGIGEPNLLAIPAAIAAYEEGHDWLRELKQVLRDNFA 300 (391)
T ss_dssp TGGGEEEEECSHHHHTCTTTCCEEEECCSHHHHHHHHHH-HHHHTCSSCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred ccCcEEEEEeChhhccccchhheEEEECCHHHHHHHHHH-HHhhccCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 288 667999998 78999999997 9998887643 1224577899999999999998743 3467778888888
Q ss_pred HHHHhhhh
Q psy6205 215 QLHTPKKE 222 (224)
Q Consensus 215 ~l~~~l~~ 222 (224)
+|.+.|++
T Consensus 301 ~l~~~l~~ 308 (391)
T 3dzz_A 301 YAREFLAK 308 (391)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88888876
No 52
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=98.91 E-value=2.9e-09 Score=91.11 Aligned_cols=137 Identities=12% Similarity=0.070 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCcccc-cc---chhhhhc
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVG-TH---WWAFQLQ 138 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG-~~---~~~~~~~ 138 (224)
+++|++.++ . +..+.++..| +...|.+. +.+.++++.++ ++++|.++| .. ++.....
T Consensus 140 ~~~l~~~l~---~--~~~~v~i~~p-~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 212 (377)
T 3fdb_A 140 LHDVEKGFQ---A--GARSILLCNP-YNPLGMVF-APEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAA 212 (377)
T ss_dssp HHHHHHHHH---T--TCCEEEEESS-BTTTTBCC-CHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHH
T ss_pred HHHHHHHhc---c--CCCEEEEeCC-CCCCCCCC-CHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCC
Confidence 455665554 1 2334445555 77778755 55557777766 888887777 21 2233333
Q ss_pred CCCCCCchhccccccc-CCccccccee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHH
Q psy6205 139 GDDIIPDIVTVGKPMG-NGHPVAAVIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGN 214 (224)
Q Consensus 139 g~~v~pDi~~~~K~l~-~G~p~~av~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~ 214 (224)
+ ..+++.+++|.+| +|+++|++++ ++++++.+... ....|++.|+++++++.++|+..++ ++..++++++.+
T Consensus 213 ~--~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 288 (377)
T 3fdb_A 213 S--VCITITAPSKAWNIAGLKCAQIIFSNPSDAEHWQQL--SPVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNHD 288 (377)
T ss_dssp H--HEEEEECSTTTTTCGGGCCEEEECCSHHHHHHHHHS--CHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred C--cEEEEEeChHhccCcchhheEEEeCCHHHHHHHHHH--HHhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 3 4567778999997 6899996655 88999888754 3446789999999999999987533 567788888888
Q ss_pred HHHHhhhh
Q psy6205 215 QLHTPKKE 222 (224)
Q Consensus 215 ~l~~~l~~ 222 (224)
+|.+.|++
T Consensus 289 ~l~~~L~~ 296 (377)
T 3fdb_A 289 FLLHEIPK 296 (377)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88888876
No 53
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=98.89 E-value=4.4e-09 Score=91.10 Aligned_cols=131 Identities=12% Similarity=0.047 Sum_probs=95.9
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCC--CCCCchhccccccc-
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGD--DIIPDIVTVGKPMG- 154 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~--~v~pDi~~~~K~l~- 154 (224)
.++.+|+++..+...|.+. +++.++++.++ ++++|.++|........+.. +...++.+++|.+|
T Consensus 166 ~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~ 244 (410)
T 3e2y_A 166 SKTKAIILNTPHNPLGKVY-TRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSV 244 (410)
T ss_dssp TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHSSC
T ss_pred CCceEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhcCC
Confidence 3688999998888888765 55667777776 88888888752223333320 12244557899999
Q ss_pred CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHH-------Hh--hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 155 NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEV-------LE--TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 155 ~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~-------~~--~~~l~~~~~~~g~~l~~~l~~l 223 (224)
.|+++|++++++++++.+... ....|++.++++++++.++|+. .+ -+++.++++++.++|.+.|+++
T Consensus 245 ~G~r~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 320 (410)
T 3e2y_A 245 TGWKLGWSIGPAHLIKHLQTV--QQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV 320 (410)
T ss_dssp GGGCCEEEECCHHHHHHHHHH--HHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEEEECHHHHHHHHHH--HHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 789999999999999888643 3456899999999999999984 11 1356677778888888888765
No 54
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=98.89 E-value=3.7e-09 Score=93.32 Aligned_cols=129 Identities=9% Similarity=0.053 Sum_probs=97.9
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccc--cchhh--hhcCCCCCCchhcccccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGT--HWWAF--QLQGDDIIPDIVTVGKPM 153 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~--~~~~~--~~~g~~v~pDi~~~~K~l 153 (224)
+++.+|+++..+...|.+. +++.++++.++ ++++|.++|. .+... ..++ ..+++.+++|.+
T Consensus 200 ~~~~~v~l~~p~nptG~~~-~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~--~~i~i~S~sK~~ 276 (447)
T 3b46_A 200 SKTKAVIINTPHNPIGKVF-TREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQ--LTLTVGSAGKSF 276 (447)
T ss_dssp TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHT--TEEEEEEHHHHT
T ss_pred cCCeEEEEeCCCCCCCccc-CHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCC--cEEEEecCchhc
Confidence 4678888887777788764 57888888887 7888766663 12222 2344 677788999999
Q ss_pred c-CCccccccee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHHHhhhhc
Q psy6205 154 G-NGHPVAAVIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETE----NLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 154 ~-~G~p~~av~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~----~l~~~~~~~g~~l~~~l~~l 223 (224)
+ .|+++|++++ ++++++.+... ....||+.++++++++.++|+....+ .+.++++++.++|.+.|+++
T Consensus 277 ~~~G~riG~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 350 (447)
T 3b46_A 277 AATGWRIGWVLSLNAELLSYAAKA--HTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL 350 (447)
T ss_dssp TCTTSCCEEEECSCHHHHHHHHHH--HHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcchhhEEEEeCCHHHHHHHHHH--HhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 8 7899999999 99999887643 34468889999999999999887433 46667788888888888764
No 55
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=98.89 E-value=2.7e-09 Score=92.81 Aligned_cols=130 Identities=13% Similarity=0.098 Sum_probs=94.3
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcC--CCCCCchhccccccc-C
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQG--DDIIPDIVTVGKPMG-N 155 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g--~~v~pDi~~~~K~l~-~ 155 (224)
++.+|+++..+...|.+ .++++++++.++ ++++|.+.|........+. .+....+.+++|.+| .
T Consensus 160 ~~~~v~l~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 238 (411)
T 2o0r_A 160 RTRALIINSPHNPTGAV-LSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCT 238 (411)
T ss_dssp TEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCT
T ss_pred CceEEEEeCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCc
Confidence 67888888888888876 457788888777 8888877664112222221 013445668999998 7
Q ss_pred CcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 156 GHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 156 G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+++|++++++++++.+... ....||+.++++++++.++|+..++ +++.++++++.++|.+.|+++
T Consensus 239 G~r~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 306 (411)
T 2o0r_A 239 GWKIGWACGPAELIAGVRAA--KQYLSYVGGAPFQPAVALALDTEDAWVAALRNSLRARRDRLAAGLTEI 306 (411)
T ss_dssp TTCEEEEECCHHHHHHHHHH--HHHHTSCCCTTHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEeeCHHHHHHHHHH--HhhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 89999999999999887643 3345788889999999999986532 456777888888888888764
No 56
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=98.88 E-value=1.1e-08 Score=89.30 Aligned_cols=144 Identities=8% Similarity=0.017 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcC---
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQG--- 139 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g--- 139 (224)
+++|++.++.....+.++.+|++.......|.+ .++++++++.++ ++++|++.|..+.....+.
T Consensus 172 ~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~ 250 (428)
T 1iay_A 172 SKAVKEAYENAQKSNIKVKGLILTNPSNPLGTT-LDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQ 250 (428)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSG
T ss_pred HHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCc-CCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhcccc
Confidence 455666554321233467777776656667875 477888888877 7777655553111222221
Q ss_pred --CCCCCc----hhccccccc-CCccccccee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh---h--hhHH
Q psy6205 140 --DDIIPD----IVTVGKPMG-NGHPVAAVIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE---T--ENLR 206 (224)
Q Consensus 140 --~~v~pD----i~~~~K~l~-~G~p~~av~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~---~--~~l~ 206 (224)
.++.+| +.+++|.+| .|+++|++++ ++++++.+.. ...+++.|+++++++.++|+..+ + +++.
T Consensus 251 ~~~~~~~d~viv~~s~sK~~g~~Glr~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 326 (428)
T 1iay_A 251 EMTYCNKDLVHIVYSLSKDMGLPGFRVGIIYSFNDDVVNCARK----MSSFGLVSTQTQYFLAAMLSDEKFVDNFLRESA 326 (428)
T ss_dssp GGTTSCTTSEEEEEESTTTSSCGGGCEEEEEESCHHHHHHHHH----HHTTSCCCHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred ccccCCCCcEEEEecchhhcCCCCceEEEEEeCCHHHHHHHHH----HHhcccCCHHHHHHHHHHhcChHHHHHHHHHHH
Confidence 013488 568999998 7899999999 7888887753 23457789999999998887532 2 4577
Q ss_pred HHHHHHHHHHHHhhhhc
Q psy6205 207 EHALDVGNQLHTPKKEN 223 (224)
Q Consensus 207 ~~~~~~g~~l~~~l~~l 223 (224)
+++++..++|.+.|+++
T Consensus 327 ~~~~~~~~~l~~~L~~~ 343 (428)
T 1iay_A 327 MRLGKRHKHFTNGLEVV 343 (428)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 78888899999988764
No 57
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=98.88 E-value=4.9e-09 Score=90.26 Aligned_cols=129 Identities=11% Similarity=0.096 Sum_probs=97.2
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccc---cchhhh-hcCCCCCCchhcccccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGT---HWWAFQ-LQGDDIIPDIVTVGKPM 153 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~---~~~~~~-~~g~~v~pDi~~~~K~l 153 (224)
+++.+|+++..+...|.+ .+++.++++.++ ++++|.+.|. .++... .++ ....+.+++|.+
T Consensus 162 ~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~--~~i~~~s~sK~~ 238 (386)
T 1u08_A 162 ERTRLVILNTPHNPSATV-WQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRE--RAVAVSSFGKTY 238 (386)
T ss_dssp TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHT--TEEEEEEHHHHT
T ss_pred ccCEEEEEeCCCCCCCcc-CCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccC--cEEEEecchhhc
Confidence 467888888777778866 467788888887 7888766553 122322 344 566677899999
Q ss_pred c-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 154 G-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 154 ~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
+ .|+++|++++++++++.+... ....+|+.++++++++.++|+..++ +++.++++++.++|.+.|+++
T Consensus 239 ~~~G~r~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 309 (386)
T 1u08_A 239 HMTGWKVGYCVAPAPISAEIRKV--HQYLTFSVNTPAQLALADMLRAEPEHYLALPDFYRQKRDILVNALNES 309 (386)
T ss_dssp TCGGGCCEEEECCHHHHHHHHHH--HHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHHHHHHHHHHHHHHTTSS
T ss_pred CCcccceEEEEcCHHHHHHHHHH--HHhhccCCChHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 8 689999999999999887643 3346888999999999999987532 467788888899999888764
No 58
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=98.87 E-value=1.7e-08 Score=87.25 Aligned_cols=139 Identities=13% Similarity=0.179 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHccCC-CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HH-hC-CccccccchhhhhcCCCCC
Q psy6205 75 AQDVQDLIEAMGRNG-KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQ-VG-FGRVGTHWWAFQLQGDDII 143 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~-~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~-tG-~GrtG~~~~~~~~~g~~v~ 143 (224)
.++|++.++. .. +++++|++++++...|.+.+.++..+.+++. ++ .| |++++. .+ .+.++ +.
T Consensus 159 ~~~l~~~l~~---~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~-~~-~~~~~--~~ 231 (398)
T 3a2b_A 159 MEDLRAKLSR---LPEDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGA-GT-ASHFG--LN 231 (398)
T ss_dssp HHHHHHHHHT---SCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGC-CH-HHHHT--CG
T ss_pred HHHHHHHHHh---hccCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCC-ch-HhhcC--CC
Confidence 3556666542 22 2688999999999889888766666666665 55 34 567775 33 45565 54
Q ss_pred --Cchh--cccccccC-CcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHH
Q psy6205 144 --PDIV--TVGKPMGN-GHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLH 217 (224)
Q Consensus 144 --pDi~--~~~K~l~~-G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~ 217 (224)
||++ +++|.++. | |.+++++++++.+......+..++..+|+.++++.++|+.++. +++.++++++.+++.
T Consensus 232 ~~~di~~~s~sK~~~~~G---G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~ 308 (398)
T 3a2b_A 232 DDVDLIMGTFSKSLASLG---GFVAGDADVIDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAK 308 (398)
T ss_dssp GGCSEEEEESSSTTCSSC---EEEEECHHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHH
T ss_pred cCCeEEEecccccccCCC---cEEEeCHHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHH
Confidence 7888 89999983 3 6688999999888653223567778899999999999988754 478899999999999
Q ss_pred Hhhhhc
Q psy6205 218 TPKKEN 223 (224)
Q Consensus 218 ~~l~~l 223 (224)
+.|+++
T Consensus 309 ~~L~~~ 314 (398)
T 3a2b_A 309 AQLLDH 314 (398)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 999875
No 59
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=98.87 E-value=5.8e-09 Score=90.73 Aligned_cols=131 Identities=14% Similarity=0.089 Sum_probs=96.6
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCC--CCCCchhccccccc-
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGD--DIIPDIVTVGKPMG- 154 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~--~v~pDi~~~~K~l~- 154 (224)
.++.+|+++..+...|.+. +++.++++.++ ++++|.++|........+.. +...++.+++|.+|
T Consensus 173 ~~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~g~ 251 (422)
T 3fvs_A 173 SRTKALVLNTPNNPLGKVF-SREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSA 251 (422)
T ss_dssp TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHHTC
T ss_pred CCceEEEECCCCCCCCcCC-CHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhcccccCcEEEEecchhccCC
Confidence 3678888888888788766 67778887776 88888777752223333320 13344557899998
Q ss_pred CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHH-------Hhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 155 NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEV-------LET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 155 ~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~-------~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
.|+++|++++++++++.+... ....+|+.|+++++++.++|+. .++ +++.++++++.++|.+.|+++
T Consensus 252 ~G~r~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 327 (422)
T 3fvs_A 252 TGWKVGWVLGPDHIMKHLRTV--HQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSV 327 (422)
T ss_dssp GGGCCEEEECCHHHHHHHHHH--HHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccceEEEEEeCHHHHHHHHHH--HhhccCCCCcHHHHHHHHHHhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 789999999999999887643 3456889999999999999985 221 356777888888888888765
No 60
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=98.86 E-value=8e-09 Score=89.84 Aligned_cols=130 Identities=13% Similarity=0.124 Sum_probs=90.8
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcC--CCCCCchhccccccc-C
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQG--DDIIPDIVTVGKPMG-N 155 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g--~~v~pDi~~~~K~l~-~ 155 (224)
++.+|++.-.+...|.+ .+.++++++.++ ++++|.++|+.......+. .+....+.+++|.+| .
T Consensus 172 ~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 250 (412)
T 2x5d_A 172 KPRMMILGFPSNPTAQC-VELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYNMA 250 (412)
T ss_dssp CCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCSCT
T ss_pred CceEEEECCCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccCCc
Confidence 56667664335556765 466788887776 8888866663111222221 013444668999998 7
Q ss_pred CcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 156 GHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 156 G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+++|++++++++++.+... ....|++.|+++++++.++|+..++ +++.++++++.++|.+.|+++
T Consensus 251 G~r~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (412)
T 2x5d_A 251 GWRIGFMVGNPELVSALARI--KSYHDYGTFTPLQVAAIAALEGDQQCVRDIARQYQQRRDVLVKGLREA 318 (412)
T ss_dssp TSCCEEEEECHHHHHHHHHH--HHHHCCCCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEcCHHHHHHHHHH--HhhhccCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 89999999999999988643 3446889999999999999986532 467777888888998888764
No 61
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=98.86 E-value=8.2e-09 Score=88.84 Aligned_cols=129 Identities=12% Similarity=0.077 Sum_probs=93.6
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC-CCc--hhccccccc-
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI-IPD--IVTVGKPMG- 154 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v-~pD--i~~~~K~l~- 154 (224)
++.+|+++..+...|.+ .+++.++++.++ ++++|.+.|........+. +. ..| +.+++|.+|
T Consensus 160 ~~~~v~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~ 237 (389)
T 1gd9_A 160 KTRALIINSPCNPTGAV-LTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLD-GMFERTITVNGFSKTFAM 237 (389)
T ss_dssp TEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGST-TCGGGEEEEEESTTTTTC
T ss_pred CceEEEEECCCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhcc-CCCCCEEEEecChhhcCC
Confidence 56788887777767865 567788888877 7888866653122333331 11 245 447999998
Q ss_pred CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh----hhHHHHHHHHHHHHHHhhhhc
Q psy6205 155 NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET----ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 155 ~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~----~~l~~~~~~~g~~l~~~l~~l 223 (224)
.|+++|++++++++++.+... ....+++.|+++++++.++|+..++ +++.++++++.++|.+.|+++
T Consensus 238 ~G~r~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 308 (389)
T 1gd9_A 238 TGWRLGFVAAPSWIIERMVKF--QMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRLNEM 308 (389)
T ss_dssp GGGCCEEEECCHHHHHHHHHH--HTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccceEEEEECHHHHHHHHHH--HhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 689999999999999888643 3446788999999999999986544 456677888888888888764
No 62
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=98.85 E-value=3.4e-08 Score=85.16 Aligned_cols=137 Identities=14% Similarity=0.174 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
++++++.++. +++.+|++..+....|.+ .|.++++++.++ +++ | +. .+..+.++ +
T Consensus 124 ~~~l~~~i~~-----~~~~~v~~~~~~~~~G~~-~~~~~l~~i~~~~~~~~~~li~D~~~~--g--~~-~~~~~~~~--~ 190 (379)
T 3ke3_A 124 IETAVAKIKE-----DKSAIVYAPHVETSSGII-LSEEYIKALSEAVHSVGGLLVIDCIAS--G--CV-WLDMKELG--I 190 (379)
T ss_dssp HHHHHHHHHH-----HTCSEEEEESEETTTTEE-CCHHHHHHHHHHHHHTTCEEEEECTTC--T--TC-CCCHHHHT--C
T ss_pred HHHHHHHHhh-----cCCcEEEEEeecCCCcee-CCHHHHHHHHHHHHHcCCEEEEEeccc--C--Cc-cccccccC--C
Confidence 4566666642 134566666666666654 457788888887 654 3 33 45677777 6
Q ss_pred CCchhcccccccCCcccccceecHHHHHhhhcC-Cccc-------------------ccCCCCcHHHHHHHHHHHHHHhh
Q psy6205 143 IPDIVTVGKPMGNGHPVAAVITTKEIAKSFQET-GVEY-------------------FNTYGGNPVSCAVANAVMEVLET 202 (224)
Q Consensus 143 ~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~-~~~~-------------------~~T~~~~p~~~aaa~a~l~~~~~ 202 (224)
...+.+..|.|+++..+|++++++++++.+... ...+ .++++.|+.++++..++|+++++
T Consensus 191 d~~~~s~~K~l~~~~g~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~~~ 270 (379)
T 3ke3_A 191 DVLISAPQKGWSSTPCAGLVMLSAAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEAKE 270 (379)
T ss_dssp SEEEECTTTTTCSCCCEEEEEECHHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred CEEEecchhhcCCCCceEEEEECHHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 555666779998876789999999998887642 1111 12347788899999999999976
Q ss_pred h---hHHHHHHHHHHHHHHhhhhcC
Q psy6205 203 E---NLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 203 ~---~l~~~~~~~g~~l~~~l~~l~ 224 (224)
+ ++.++.+++.++|++.|+++|
T Consensus 271 ~g~~~~~~~~~~l~~~l~~~l~~~g 295 (379)
T 3ke3_A 271 IGFDILRDAQWELGNRVRKVLTDKG 295 (379)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hcHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4 788889999999999998764
No 63
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=98.84 E-value=8.5e-09 Score=88.72 Aligned_cols=128 Identities=9% Similarity=-0.046 Sum_probs=95.2
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCcccccc---chhhh--hcCCCCCCchhcccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTH---WWAFQ--LQGDDIIPDIVTVGKPM 153 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~---~~~~~--~~g~~v~pDi~~~~K~l 153 (224)
++.+|+++..+...|.+. +++.++++.++ ++++|.+.|.. ++... .++ ..+++.+++|.+
T Consensus 163 ~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~sK~~ 239 (388)
T 1j32_A 163 KTKLLVFNTPSNPTGMVY-TPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYE--RSVVCSGFAKTY 239 (388)
T ss_dssp TEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHH--TEEEEEESTTTT
T ss_pred CceEEEEeCCCCCCCcCC-CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccC--CEEEEeechhcc
Confidence 577888888777788765 56778877776 77777665531 12221 133 556777899999
Q ss_pred c-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 154 G-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 154 ~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
| .|+++|++++++++++.+... ...+|++.++++++++.++|+..++ +++.++++++.++|.+.|+++
T Consensus 240 ~~~G~r~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 310 (388)
T 1j32_A 240 AMTGWRVGFLAGPVPLVKAATKI--QGHSTSNVCTFAQYGAIAAYENSQDCVQEMLAAFAERRRYMLDALNAM 310 (388)
T ss_dssp TCTTTCCEEEECCHHHHHHHHHH--HHTTTCSCCHHHHHHHHHHHHSCSHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCcccceEEEEeCHHHHHHHHHH--HhhcccCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 8 689999999999999887643 3346888999999999999975432 457778888999999998764
No 64
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=98.84 E-value=6.9e-09 Score=90.06 Aligned_cols=142 Identities=11% Similarity=0.069 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCcccc---ccchhhhhcC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVG---THWWAFQLQG 139 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG---~~~~~~~~~g 139 (224)
+++|++.+.. ...+..++++...+...|. ..+.++++++.++ ++++|+++| . ++....+.
T Consensus 170 ~~~l~~~l~~---~~~~~~~v~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~-~~~~~~~~ 244 (412)
T 1ajs_A 170 LQGFLSDLEN---APEFSIFVLHACAHNPTGT-DPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKD-AWAIRYFV 244 (412)
T ss_dssp HHHHHHHHHH---SCTTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHH-THHHHHHH
T ss_pred HHHHHHHHHh---CCCCcEEEEECCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEEcccccccCCccccc-chHHHHHh
Confidence 4556665543 2234455544433444564 5677888888776 778898876 3 34555442
Q ss_pred CCCCCc----hhcccccccC-Cccccccee---cHHHHHhhhcCC-cccccCCC-CcHHHHHHHHHHHHHHh--------
Q psy6205 140 DDIIPD----IVTVGKPMGN-GHPVAAVIT---TKEIAKSFQETG-VEYFNTYG-GNPVSCAVANAVMEVLE-------- 201 (224)
Q Consensus 140 ~~v~pD----i~~~~K~l~~-G~p~~av~~---~~~i~~~~~~~~-~~~~~T~~-~~p~~~aaa~a~l~~~~-------- 201 (224)
..+| +.+++|.+|. |+++|++++ ++++++.+.... ..+..||. .|+++++++.++|+..+
T Consensus 245 --~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 322 (412)
T 1ajs_A 245 --SEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGN 322 (412)
T ss_dssp --HTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHHH
T ss_pred --ccCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHHH
Confidence 2355 5589999998 899999999 888555432210 11335666 49999999999998652
Q ss_pred hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 202 TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 202 ~~~l~~~~~~~g~~l~~~l~~l 223 (224)
-+++.++++++.++|.+.|+++
T Consensus 323 ~~~~~~~~~~~~~~l~~~L~~~ 344 (412)
T 1ajs_A 323 VKTMADRILSMRSELRARLEAL 344 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 2567888899999999999875
No 65
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=98.81 E-value=7.1e-08 Score=83.41 Aligned_cols=145 Identities=12% Similarity=0.065 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHccCCCCceEEEEcc-ccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCC-
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAES-LQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGD- 140 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Ep-v~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~- 140 (224)
+++|++.++.......++.+|++.| .+...|.+. +.++++++.++ ++++|.+.|........++.
T Consensus 158 ~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 236 (407)
T 2zc0_A 158 VDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTM-SMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNE 236 (407)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSS
T ss_pred HHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCC-CHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCC
Confidence 4556655542110123677775444 566688765 56777777766 78887666642223333320
Q ss_pred CCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHH--h---hhhHHHHHHHHHHH
Q psy6205 141 DIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVL--E---TENLREHALDVGNQ 215 (224)
Q Consensus 141 ~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~--~---~~~l~~~~~~~g~~ 215 (224)
+...++.+++|.++.|+++|++++++++++.+... ....+++.++++++++.+.|+.. + -+...++++++.++
T Consensus 237 ~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 314 (407)
T 2zc0_A 237 GRVIVAGTLSKVLGTGFRIGWIIAEGEILKKVLMQ--KQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRDI 314 (407)
T ss_dssp CCEEEEEESTTTTCTTSCCEEEECCHHHHHHHHHH--HTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHHH
T ss_pred CCEEEEcccccccCCCcceEEEecCHHHHHHHHHH--HHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHH
Confidence 12345668999999889999999999999888643 33467788999999999999864 2 23567778888888
Q ss_pred HHHhhhh
Q psy6205 216 LHTPKKE 222 (224)
Q Consensus 216 l~~~l~~ 222 (224)
|.+.|++
T Consensus 315 l~~~L~~ 321 (407)
T 2zc0_A 315 MLKALEN 321 (407)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8888865
No 66
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=98.80 E-value=7.2e-09 Score=88.70 Aligned_cols=128 Identities=15% Similarity=0.085 Sum_probs=93.7
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCC-CCc--hhccccccc-CCcc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDI-IPD--IVTVGKPMG-NGHP 158 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v-~pD--i~~~~K~l~-~G~p 158 (224)
++.+|+++..+...|.+.+.+ ..+.+++. ++++|.+.|. ......+. +. ..| +.+++|.+| .|++
T Consensus 154 ~~~~v~~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r 230 (370)
T 2z61_A 154 KTKAIIINSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFD-ENLEKTILINGFSKLYAMTGWR 230 (370)
T ss_dssp SEEEEEEESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTC-TTCSSEEEEEESTTTTTCGGGC
T ss_pred CceEEEEcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHcc-CCCCcEEEEecChhccCCccce
Confidence 677888887777788888777 55666665 7888766664 33333331 01 124 447899998 7899
Q ss_pred cccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHH-Hhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 159 VAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEV-LET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 159 ~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~-~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|++++++++++.+... ....|++.|+++++++.++|+. .++ +++.++++++.++|.+.|+++
T Consensus 231 ~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 296 (370)
T 2z61_A 231 IGYVISNDEIIEAILKL--QQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF 296 (370)
T ss_dssp CEEEECCHHHHHHHHHH--HHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEECHHHHHHHHHH--HhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999888643 3446788999999999999976 322 457778888999999988764
No 67
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=98.80 E-value=4.2e-08 Score=84.03 Aligned_cols=137 Identities=12% Similarity=0.054 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH---------HHhCCccccccchhh-hhcCCCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH---------VQVGFGRVGTHWWAF-QLQGDDIIP 144 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~---------v~tG~GrtG~~~~~~-~~~g~~v~p 144 (224)
+++|++.++. .++++|+++..+...|.+. +.+.++++.+. ++++|++... .+.. +.++ ...+
T Consensus 153 ~~~l~~~i~~-----~~~~~v~~~~~~nptG~~~-~~~~l~~l~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~-~~~i 224 (369)
T 3cq5_A 153 MDVALEEIRA-----KQPDIVFVTTPNNPTGDVT-SLDDVERIINVAPGIVIVDEAYAEFSPSPS-ATTLLEKYP-TKLV 224 (369)
T ss_dssp HHHHHHHHHH-----HCCSEEEEESSCTTTCCCC-CHHHHHHHHHHCSSEEEEECTTGGGCCSCC-GGGGTTTCT-TTEE
T ss_pred HHHHHHHhhc-----cCCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCEEEEECCchhhcCCcc-hHHHHhhCC-CCEE
Confidence 4556655542 1567899988888888766 56677666666 7777765432 2222 2221 0335
Q ss_pred chhccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhh
Q psy6205 145 DIVTVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 145 Di~~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~ 222 (224)
++.+++|.+| .|+++|++++++++.+.+... ..+|+.|+++++++.++|+..+ -++..++++++.++|.+.|++
T Consensus 225 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~l~~~----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~ 300 (369)
T 3cq5_A 225 VSRTMSKAFDFAGGRLGYFVANPAFIDAVMLV----RLPYHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVAARLEE 300 (369)
T ss_dssp EEEESSSTTSCGGGCCEEEEECTHHHHHHHTT----SCTTCSCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred EEEechHhcCCcccceEEEEeCHHHHHHHHHc----CCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6778999998 789999999999999888643 2467799999999999998643 246777888888888888875
Q ss_pred c
Q psy6205 223 N 223 (224)
Q Consensus 223 l 223 (224)
.
T Consensus 301 ~ 301 (369)
T 3cq5_A 301 L 301 (369)
T ss_dssp H
T ss_pred C
Confidence 3
No 68
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=98.79 E-value=1.1e-08 Score=87.56 Aligned_cols=131 Identities=10% Similarity=0.025 Sum_probs=92.5
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCC---CCCCchhccccccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGD---DIIPDIVTVGKPMG 154 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~---~v~pDi~~~~K~l~ 154 (224)
.++.+|+++..+...|.+. +.+.++++.++ ++++|+++|........+.. +..+++.+++|.++
T Consensus 155 ~~~~~v~i~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 233 (383)
T 3kax_A 155 QGVKLMLLCSPHNPIGRVW-KKEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFN 233 (383)
T ss_dssp TTCCEEEEESSBTTTTBCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHT
T ss_pred cCCeEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhcc
Confidence 3566777777777788755 56667777665 88888887742112222110 14466778999999
Q ss_pred -CCccccccee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHhhhh
Q psy6205 155 -NGHPVAAVIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 155 -~G~p~~av~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~~l~~ 222 (224)
+|+++|++++ ++++++.+... .....+++.|+++++++.++|+..+ -+++.++++++.+++.+.|++
T Consensus 234 ~~G~r~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~ 304 (383)
T 3kax_A 234 IAGLQASIIIIPNEKLRQAFTSI-QYRQGFHGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKD 304 (383)
T ss_dssp CGGGCCEEEECCCHHHHHHHHHH-HHHTTCCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchhheEEEeCCHHHHHHHHHH-HhhcccCCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7899999998 78898887643 1223456899999999999998643 245677788888888888876
No 69
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=98.77 E-value=3.3e-08 Score=85.10 Aligned_cols=136 Identities=8% Similarity=-0.004 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI 142 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v 142 (224)
+++|++.++ ..++.+|++...+...|.+. ++++++++.++ ++++|.++|..+..... +
T Consensus 151 ~~~l~~~l~-----~~~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~----~ 220 (390)
T 1d2f_A 151 MGKLEAVLA-----KPECKIMLLCSPQNPTGKVW-TCDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSN----V 220 (390)
T ss_dssp HHHHHHHHT-----STTEEEEEEESSCTTTCCCC-CTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGG----T
T ss_pred HHHHHHHhc-----cCCCeEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHH----c
Confidence 345555443 12567777654466678764 55677777776 88888777752212222 3
Q ss_pred CC---c-hhccccccc-CCcccccceec-HHHHHhhhcCCccc-ccCC-CCcHHHHHHHHHHHHHHhh--hhHHHHHHHH
Q psy6205 143 IP---D-IVTVGKPMG-NGHPVAAVITT-KEIAKSFQETGVEY-FNTY-GGNPVSCAVANAVMEVLET--ENLREHALDV 212 (224)
Q Consensus 143 ~p---D-i~~~~K~l~-~G~p~~av~~~-~~i~~~~~~~~~~~-~~T~-~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~ 212 (224)
.+ | +.+++|.+| +|+++|+++++ +++++.+... .. .+|| +.|+++++++.++|+..++ ++..++++++
T Consensus 221 ~~~~~d~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 298 (390)
T 1d2f_A 221 ARGDWALLTSGSKSFNIPALTGAYGIIENSSSRDAYLSA--LKGRDGLSSPSVLALTAHIAAYQQGAPWLDALRIYLKDN 298 (390)
T ss_dssp CCSSEEEEECSHHHHTCGGGCCEEEEECSHHHHHHHHHH--HHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred chhhHhhccCccHhhcccChhheEEEECCHHHHHHHHHH--HhhhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 23 3 889999998 78999999985 7888877543 23 4566 7899999999999986322 3456667778
Q ss_pred HHHHHHhhhh
Q psy6205 213 GNQLHTPKKE 222 (224)
Q Consensus 213 g~~l~~~l~~ 222 (224)
.++|.+.|++
T Consensus 299 ~~~l~~~L~~ 308 (390)
T 1d2f_A 299 LTYIADKMNA 308 (390)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 8888888865
No 70
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=98.76 E-value=9.6e-08 Score=81.73 Aligned_cols=136 Identities=15% Similarity=0.152 Sum_probs=99.2
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
+++|++.++. +++.+|++++.+...|.+.+.++..+.+++. +++ +| +. .+..+.++ +|+
T Consensus 137 ~~~l~~~i~~-----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~-~g--~~-~~~~~~~~----~d~ 203 (393)
T 3kgw_A 137 LQEVEEGLAQ-----HKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVAS-LG--GV-PIYMDQQG----IDI 203 (393)
T ss_dssp HHHHHHHHHH-----HCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTT-TT--TS-CCCTTTTT----CCE
T ss_pred HHHHHHHHhh-----CCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCcc-cc--Cc-ccchhhcC----CCE
Confidence 4566666652 2678999999999999988877777777776 433 22 11 22333333 688
Q ss_pred hccc--ccccCCcccccceecHHHHHhhhcCCc---------------------ccccCCCCcHHHHHHHHHHHHHHhh-
Q psy6205 147 VTVG--KPMGNGHPVAAVITTKEIAKSFQETGV---------------------EYFNTYGGNPVSCAVANAVMEVLET- 202 (224)
Q Consensus 147 ~~~~--K~l~~G~p~~av~~~~~i~~~~~~~~~---------------------~~~~T~~~~p~~~aaa~a~l~~~~~- 202 (224)
++++ |.++|+.++|++++++++++.+..... ....+++.|+.+++++.++++.+++
T Consensus 204 ~~~s~sK~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 283 (393)
T 3kgw_A 204 MYSSSQKVLNAPPGISLISFNDKAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQ 283 (393)
T ss_dssp EEEESSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEecCcccccCCCceeEEEECHHHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 7766 999887789999999999988764210 0123566789999999999998865
Q ss_pred --hhHHHHHHHHHHHHHHhhhhc
Q psy6205 203 --ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 203 --~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++.++++++.++|.+.|+++
T Consensus 284 ~~~~~~~~~~~~~~~l~~~L~~~ 306 (393)
T 3kgw_A 284 GLENCWRRHREATAHLHKHLQEM 306 (393)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHc
Confidence 577889999999999999875
No 71
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=98.76 E-value=2.8e-08 Score=84.66 Aligned_cols=124 Identities=12% Similarity=0.039 Sum_probs=90.5
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH-----------HHhCCccccccchhhhhcCCCCCCc----hhccccccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH-----------VQVGFGRVGTHWWAFQLQGDDIIPD----IVTVGKPMG 154 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----------v~tG~GrtG~~~~~~~~~g~~v~pD----i~~~~K~l~ 154 (224)
+++.+|+++..+...|.+.+.+ .+.++.+. ++++|++ |+ +....... ..+| +.+++|.+|
T Consensus 154 ~~~~~v~~~~p~nptG~~~~~~-~l~~l~~~~~~~~~li~De~~~~~~~-~~-~~~~~~~~--~~~~~~i~~~s~sK~~g 228 (363)
T 3ffh_A 154 EKTTIVWICNPNNPTGNYIELA-DIQAFLDRVPSDVLVVLDEAYIEYVT-PQ-PEKHEKLV--RTYKNLIITRTFSKIYG 228 (363)
T ss_dssp TTEEEEEEESSCTTTCCCCCHH-HHHHHHTTSCTTSEEEEECTTGGGCS-SC-CCCCGGGG--GTCTTEEEEEESSSTTC
T ss_pred cCCCEEEEeCCCCCcCCCcCHH-HHHHHHHhCCCCcEEEEeCchHhhcC-cc-ccCHHHHh--hcCCCEEEEeechhhhc
Confidence 3578888887788888876554 45555443 7888877 64 33433332 3455 567999998
Q ss_pred -CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhhhh
Q psy6205 155 -NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 155 -~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~~l~~ 222 (224)
.|+++|++++++++.+.+... ..+|+.|+++++++.++|+..+. ++..++.+++.++|.+.|++
T Consensus 229 ~~G~r~G~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 294 (363)
T 3ffh_A 229 LASARVGYGIADKEIIRQLNIV----RPPFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKR 294 (363)
T ss_dssp CSSCCCEEEEECHHHHHHHHHT----CCSCCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CchhceeeeecCHHHHHHHHHh----CCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 789999999999999988753 24889999999999999974321 35667777888888888876
No 72
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=98.75 E-value=9.6e-09 Score=88.74 Aligned_cols=140 Identities=9% Similarity=0.125 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcC---
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQG--- 139 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g--- 139 (224)
+++|++.+. . +..+|++...+...|.+. +++.++++.++ ++++|.++|+.+.....++
T Consensus 169 ~~~l~~~l~----~--~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~ 241 (407)
T 3nra_A 169 LTGLEEAFK----A--GARVFLFSNPNNPAGVVY-SAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVD 241 (407)
T ss_dssp HHHHHHHHH----T--TCCEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSC
T ss_pred HHHHHHHHh----h--CCcEEEEcCCCCCCCccc-CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCccc
Confidence 455666554 1 344555554467778655 56667777766 8888877775222333221
Q ss_pred CCCCCchhccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHH
Q psy6205 140 DDIIPDIVTVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQL 216 (224)
Q Consensus 140 ~~v~pDi~~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l 216 (224)
.+...++.+++|.+| .|+++|++++++++++.+... ....+++.++++++++.++|+..+ -++..++.+++.++|
T Consensus 242 ~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l 319 (407)
T 3nra_A 242 AENVVTIMGPSKTESLSGYRLGVAFGSRAIIARMEKL--QAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDEL 319 (407)
T ss_dssp GGGEEEEECSSSTTCCGGGCCEEEEECHHHHHHHHHH--HHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCcccccCCCeeeEEEEEcCHHHHHHHHHH--HhhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHH
Confidence 013355668999999 789999999999999988653 345678889999988888776321 134566777788888
Q ss_pred HHhhhhc
Q psy6205 217 HTPKKEN 223 (224)
Q Consensus 217 ~~~l~~l 223 (224)
.+.|+++
T Consensus 320 ~~~L~~~ 326 (407)
T 3nra_A 320 LHVLRGC 326 (407)
T ss_dssp HHHHHTS
T ss_pred HHHHhcC
Confidence 8888764
No 73
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=98.73 E-value=5e-08 Score=84.17 Aligned_cols=140 Identities=11% Similarity=0.059 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcC---
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQG--- 139 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g--- 139 (224)
+++|++.++ ..++.+|++...+...|.+ .++++++++.++ ++++|+++|........+.
T Consensus 153 ~~~l~~~l~-----~~~~~~v~~~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 226 (399)
T 1c7n_A 153 FQKLEKLSK-----DKNNKALLFCSPHNPVGRV-WKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQL 226 (399)
T ss_dssp HHHHHHHHT-----CTTEEEEEEESSBTTTTBC-CCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHH
T ss_pred HHHHHHHhc-----cCCCcEEEEcCCCCCCCcC-cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccc
Confidence 445555443 1356778776566667865 567788888887 8888877764222232221
Q ss_pred CCCCCchhccccccc-CCcccccceec-HHHHHhhhcCCcccccCC-CCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHH
Q psy6205 140 DDIIPDIVTVGKPMG-NGHPVAAVITT-KEIAKSFQETGVEYFNTY-GGNPVSCAVANAVMEVLET--ENLREHALDVGN 214 (224)
Q Consensus 140 ~~v~pDi~~~~K~l~-~G~p~~av~~~-~~i~~~~~~~~~~~~~T~-~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~ 214 (224)
.+...++.+++|.+| .|+++|+++++ +++++.+... ....++ +.|+++++++.++|+..++ +...++++++.+
T Consensus 227 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 304 (399)
T 1c7n_A 227 ADKTITFTAPSKTFNIAGMGMSNIIIKNPDIRERFTKS--RDATSGMPFTTLGYKACEICYKECGKWLDGCIKVIDKNQR 304 (399)
T ss_dssp HTTEEEEECSHHHHTCGGGCCEEEECCCHHHHHHHHHH--HHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred cCcEEEEEeChhhccccchheEEEEECCHHHHHHHHHH--HhhcccCCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 013344568999999 78999999997 6788887643 223344 6799999999999976321 345666777888
Q ss_pred HHHHhhhh
Q psy6205 215 QLHTPKKE 222 (224)
Q Consensus 215 ~l~~~l~~ 222 (224)
++.+.|++
T Consensus 305 ~l~~~L~~ 312 (399)
T 1c7n_A 305 IVKDFFEV 312 (399)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88888765
No 74
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=98.73 E-value=2.1e-08 Score=86.04 Aligned_cols=129 Identities=11% Similarity=-0.011 Sum_probs=90.0
Q ss_pred ceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCC---CCCCchhccccccc-C
Q psy6205 92 PCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGD---DIIPDIVTVGKPMG-N 155 (224)
Q Consensus 92 iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~---~v~pDi~~~~K~l~-~ 155 (224)
+.+|+++..+...|.+. +++.++++.++ ++++|.++|+.......+.. +....+.+++|.+| +
T Consensus 165 ~~~v~i~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~ 243 (391)
T 4dq6_A 165 VKLFILCNPHNPVGRVW-TKDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIA 243 (391)
T ss_dssp EEEEEEESSBTTTTBCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCG
T ss_pred CCEEEEECCCCCCCcCc-CHHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCc
Confidence 66777776677788754 55567887776 88888877752222222210 02233558999998 7
Q ss_pred CcccccceecH-HHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHhhhh
Q psy6205 156 GHPVAAVITTK-EIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 156 G~p~~av~~~~-~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~~l~~ 222 (224)
|+++|++++++ ++++.+... .....+++.|+++++++.++|+..+ -++..++++++.+++.+.|++
T Consensus 244 G~r~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~ 312 (391)
T 4dq6_A 244 GLQSSYVVLPDEKDYKLLDDA-FTRIDIKRNNCFSLVATEASYNNGESWLESFLEYLESNIDFAIKYINE 312 (391)
T ss_dssp GGCCEEEECCSHHHHHHHHHH-HHHTTCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEEeCCHHHHHHHHHH-HHhhcCCCCCHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999875 888877643 1234577899999999999998743 245677778888888888865
No 75
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.71 E-value=1.9e-08 Score=86.87 Aligned_cols=127 Identities=15% Similarity=0.089 Sum_probs=92.3
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCC-CCCc--hhccccccc-
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDD-IIPD--IVTVGKPMG- 154 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~-v~pD--i~~~~K~l~- 154 (224)
++.+|+++..+...|.+ .+++.++++.++ ++++|...|. ......+. + -..| +.+++|.+|
T Consensus 174 ~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~-~~~~~~~~-~~~~~~i~~~s~sK~~~~ 250 (389)
T 1o4s_A 174 KTKAVLINSPNNPTGVV-YRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDE-FTSILDVS-EGFDRIVYINGFSKSHSM 250 (389)
T ss_dssp TEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSC-CCCHHHHC-SSSTTEEEEEESTTTTTC
T ss_pred CceEEEEcCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCCHhhcC-CCCCcEEEEeechhhcCC
Confidence 57788888777777875 456777777776 7777766553 23333332 0 1134 457899998
Q ss_pred CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 155 NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 155 ~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
.|+++|++++++++++.+... ....|++.++++++++.++|+.. .+++.++++++.+++.+.|+++
T Consensus 251 ~G~r~G~l~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~l~~~L~~~ 316 (389)
T 1o4s_A 251 TGWRVGYLISSEKVATAVSKI--QSHTTSCINTVAQYAALKALEVD-NSYMVQTFKERKNFVVERLKKM 316 (389)
T ss_dssp GGGCCEEEECCHHHHHHHHHH--HHHHTCSCCHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccceEEEEeCHHHHHHHHHH--hhhcccCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHhc
Confidence 689999999999999887643 33457888999999888887643 4567888899999999988764
No 76
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=98.71 E-value=1.7e-08 Score=87.74 Aligned_cols=128 Identities=10% Similarity=0.091 Sum_probs=91.6
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCcccccc--chhhh-hcCCCCCCchhccccccc-
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTH--WWAFQ-LQGDDIIPDIVTVGKPMG- 154 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~--~~~~~-~~g~~v~pDi~~~~K~l~- 154 (224)
++.+|+++..+...|.+ .++++++++.++ ++++|.++|.. ++... ..+ ....+.+++|.+|
T Consensus 181 ~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~--~~i~~~s~sK~~g~ 257 (404)
T 2o1b_A 181 KTKLIYLTYPNNPTGST-ATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKD--VAIEIYSLSKGYNM 257 (404)
T ss_dssp HEEEEEECSSCTTTCCC-CCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHH--HEEEEEESTTTTTC
T ss_pred CceEEEEcCCCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCC--CEEEEEecchhccC
Confidence 46778887545557765 567888888887 78887655531 22221 122 3345668999998
Q ss_pred CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 155 NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 155 ~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
.|+++|++++++++++.+... ....+++.|+++++++.++|+..++ ++..++++++.++|.+.|+++
T Consensus 258 ~G~r~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 326 (404)
T 2o1b_A 258 SGFRVGFAVGNKDMIQALKKY--QTHTNAGMFGALQDAAIYALNHYDDFLEEQSNVFKTRRDRFEAMLAKA 326 (404)
T ss_dssp GGGCCEEEEECHHHHHHHHHH--HHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred chhheEeEecCHHHHHHHHHH--HhhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 789999999999999888643 3346788999999999999987422 345666778888888888764
No 77
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=98.70 E-value=1.2e-07 Score=82.80 Aligned_cols=128 Identities=8% Similarity=0.083 Sum_probs=85.8
Q ss_pred CCceEEEEccc-cCCCCcccCCHHHHHHHHHH------------HHhCCcccccc---chhhhhcCCCCCCchhcccccc
Q psy6205 90 KRPCAFFAESL-QSCGGQIIPPANYLREVYKH------------VQVGFGRVGTH---WWAFQLQGDDIIPDIVTVGKPM 153 (224)
Q Consensus 90 ~~iaavi~Epv-~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~---~~~~~~~g~~v~pDi~~~~K~l 153 (224)
.++.+|++.|. +...|.+ .+.+.++++.++ ++++|...|.. +......+ ....+.+++|.+
T Consensus 189 ~~~~~v~~~~~~~NPtG~~-~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~--~~i~~~s~SK~~ 265 (425)
T 2r2n_A 189 NTPKFLYTVPNGNNPTGNS-LTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDG--RVIRADSFSKII 265 (425)
T ss_dssp CCCSEEEECCSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTS--CEEEEEESTTTT
T ss_pred CCceEEEECCCCcCCCCCc-CCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCC--CEEEEccchhhc
Confidence 35778888875 4447765 566777777766 77766555531 22222222 334566899999
Q ss_pred cCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhh-------HHHHHHHHHHHHHHhhhh
Q psy6205 154 GNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETEN-------LREHALDVGNQLHTPKKE 222 (224)
Q Consensus 154 ~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~-------l~~~~~~~g~~l~~~l~~ 222 (224)
+.|+++|++++++++++.+... ....+++.|+++++++.++|+.+.+++ +.++.++.-++|.+.|++
T Consensus 266 ~~GlRiG~~~~~~~l~~~l~~~--~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 339 (425)
T 2r2n_A 266 SSGLRIGFLTGPKPLIERVILH--IQVSTLHPSTFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADK 339 (425)
T ss_dssp CSTTCCEEEEEEHHHHHHHHHH--HHTTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCccceEEEecCHHHHHHHHHH--HHHhcCCCCHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9889999999999999888643 334678899999999999998754322 334445555556566554
No 78
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.70 E-value=4.8e-08 Score=85.39 Aligned_cols=145 Identities=10% Similarity=0.053 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHcc--CCCCceEEEEcc-ccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcC
Q psy6205 75 AQDVQDLIEAMGR--NGKRPCAFFAES-LQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQG 139 (224)
Q Consensus 75 ~~~l~~~~~~~~~--~~~~iaavi~Ep-v~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g 139 (224)
+++|++.++.... ++.++.+|++.| .+...|.+ .+.++++++.++ ++++|.+.|........++
T Consensus 169 ~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~ 247 (425)
T 1vp4_A 169 LNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVT-TSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIG 247 (425)
T ss_dssp HHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHH
T ss_pred HHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhC
Confidence 4556665543110 123677775555 44446765 467788877776 7888866664222333332
Q ss_pred C-CCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHH--hh--hhHHHHHHHHHH
Q psy6205 140 D-DIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVL--ET--ENLREHALDVGN 214 (224)
Q Consensus 140 ~-~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~--~~--~~l~~~~~~~g~ 214 (224)
. +....+.+++|.++.|+++|++++++++++.+... ....|++.|+++++++.++|+.. ++ +...+++++..+
T Consensus 248 ~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 325 (425)
T 1vp4_A 248 GPERVVLLNTFSKVLAPGLRIGMVAGSKEFIRKIVQA--KQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRKRT 325 (425)
T ss_dssp CTTTEEEEEESTTTTCGGGCEEEEECCHHHHHHHHHH--HHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHHHH
T ss_pred CCCCEEEEeccccccccccceEEEeeCHHHHHHHHHH--hhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 0 02223558999999889999999999999888643 23456778999999999999874 22 356666778888
Q ss_pred HHHHhhhh
Q psy6205 215 QLHTPKKE 222 (224)
Q Consensus 215 ~l~~~l~~ 222 (224)
+|.+.|++
T Consensus 326 ~l~~~L~~ 333 (425)
T 1vp4_A 326 VMLNALEE 333 (425)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88888875
No 79
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=98.69 E-value=4.6e-08 Score=83.29 Aligned_cols=139 Identities=9% Similarity=0.085 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
+++|++.++....+ +++++|++++.+...|.+.+.++..+.+++. +++. |..+ +....++ +|+
T Consensus 132 ~~~l~~~l~~~~~~-~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~-~~~~---~~~~~~~----~di 202 (371)
T 2e7j_A 132 PENFAQTIEETKKR-GEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAI-GRMP---VSLKEIG----ADF 202 (371)
T ss_dssp HHHHHHHHHHHTTT-SCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTB-TTBC---CCHHHHT----CSE
T ss_pred HHHHHHHHHhhccc-CCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECcccc-CCCC---CChhhcC----CCE
Confidence 45666666542111 4688999999999999888866666666665 4443 3332 1233344 677
Q ss_pred hc--ccccccCCcccccceecHHHHHh-hhcCCccccc-----CCCCcHHHHHHHHHHHHHHhhhhHHHHH--HHHHHHH
Q psy6205 147 VT--VGKPMGNGHPVAAVITTKEIAKS-FQETGVEYFN-----TYGGNPVSCAVANAVMEVLETENLREHA--LDVGNQL 216 (224)
Q Consensus 147 ~~--~~K~l~~G~p~~av~~~~~i~~~-~~~~~~~~~~-----T~~~~p~~~aaa~a~l~~~~~~~l~~~~--~~~g~~l 216 (224)
++ ++|.++++.++|++++++++++. +......+.. +++.|+.+++++.++++.+++ ++.+++ +++.+++
T Consensus 203 ~~~s~sK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~l 281 (371)
T 2e7j_A 203 IVGSGHKSMAASGPIGVMGMKEEWAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRE-RIKRWDEEVEKARRF 281 (371)
T ss_dssp EEEEHHHHSSCCSSCEEEEECTTTTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH-HGGGHHHHHHHHHHH
T ss_pred EEecCCcCCCCCCCcEEEEEechhhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 74 69999988899999999998877 6543111223 677899999999999999876 788888 8999999
Q ss_pred HHhhhhc
Q psy6205 217 HTPKKEN 223 (224)
Q Consensus 217 ~~~l~~l 223 (224)
.+.|+++
T Consensus 282 ~~~L~~~ 288 (371)
T 2e7j_A 282 AAEMEKL 288 (371)
T ss_dssp HHHHHHT
T ss_pred HHHHHHc
Confidence 9998764
No 80
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=98.69 E-value=7.3e-08 Score=84.39 Aligned_cols=127 Identities=7% Similarity=0.026 Sum_probs=92.4
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchh---ccccccc-
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIV---TVGKPMG- 154 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~---~~~K~l~- 154 (224)
+..+|++...+...|.+. +++.++++.++ ++++|+++|..+.....++ ..++++ +++|.++
T Consensus 191 ~~~~v~i~~p~nptG~~~-~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~--~~~~vi~~~S~sK~~~~ 267 (427)
T 3dyd_A 191 KTACLIVNNPSNPCGSVF-SKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLS--TDVPILSCGGLAKRWLV 267 (427)
T ss_dssp TEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGC--SSCCEEEEEESTTTSSC
T ss_pred CCCEEEEECCCCCCCCCC-CHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhC--CCCcEEEEeeccccCCC
Confidence 345555555577788754 66678888777 8899988886334555665 566677 8999976
Q ss_pred CCcccccceec-------HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHhhhhc
Q psy6205 155 NGHPVAAVITT-------KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 155 ~G~p~~av~~~-------~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~~~l~~l 223 (224)
.|+++|+++++ +++.+.+... ...|++.|+++++++.++|+...+ ++..++++++.+++.+.|+++
T Consensus 268 ~G~riG~~~~~~~~~~~~~~i~~~l~~~---~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 343 (427)
T 3dyd_A 268 PGWRLGWILIHDRRDIFGNEIRDGLVKL---SQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGALAAI 343 (427)
T ss_dssp GGGCCEEEEEECSTTSSHHHHHHHHHHH---HHHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred cCcceEEEEecCcchhhHHHHHHHHHHH---HhccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 57999999997 5787776532 224788999999999999986432 356667778888888888764
No 81
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=98.67 E-value=3.1e-07 Score=78.89 Aligned_cols=136 Identities=10% Similarity=0.053 Sum_probs=100.0
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
+++|++.++. . ++.+|++++.+...|.+.+.++..+.+++. +++ ||.... ... . ..+|+
T Consensus 148 ~~~l~~~l~~---~--~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~-~g~~~~---~~~--~--~~~di 214 (393)
T 1vjo_A 148 LEELRTALET---H--RPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTS-LGGVPI---FLD--A--WGVDL 214 (393)
T ss_dssp HHHHHHHHHH---H--CCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTT-TTTSCC---CTT--T--TTCSE
T ss_pred HHHHHHHHhh---C--CceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCcc-ccCcCC---ccc--c--cCccE
Confidence 4566666642 1 567899999999899988888888888887 555 654321 121 2 45899
Q ss_pred hccc--ccccCCcccccceecHHHHHhhhcC-----Cccc------------ccCC-CCcHHHHHHHHHHHHHHhh---h
Q psy6205 147 VTVG--KPMGNGHPVAAVITTKEIAKSFQET-----GVEY------------FNTY-GGNPVSCAVANAVMEVLET---E 203 (224)
Q Consensus 147 ~~~~--K~l~~G~p~~av~~~~~i~~~~~~~-----~~~~------------~~T~-~~~p~~~aaa~a~l~~~~~---~ 203 (224)
++.+ |.++++.++|++++++++++.+... ...+ ..++ +.|+++++++.++|+.+.+ +
T Consensus 215 ~~~s~sK~l~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~ 294 (393)
T 1vjo_A 215 AYSCSQKGLGCSPGASPFTMSSRAIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLA 294 (393)
T ss_dssp EECCSSSTTCSCSSCEEEEECHHHHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHH
T ss_pred EEEcCcccccCCCceEEEEECHHHHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHH
Confidence 8766 9998766899999999999887431 1111 2344 7799999999999999854 4
Q ss_pred hHHHHHHHHHHHHHHhhhhc
Q psy6205 204 NLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 204 ~l~~~~~~~g~~l~~~l~~l 223 (224)
++.++++++.+++.+.|+++
T Consensus 295 ~~~~~~~~~~~~l~~~L~~~ 314 (393)
T 1vjo_A 295 NCWQRHQKNVEYLWERLEDI 314 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 68888999999999999865
No 82
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=98.67 E-value=1.5e-08 Score=86.82 Aligned_cols=129 Identities=9% Similarity=0.081 Sum_probs=89.3
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcC-CCCCCchhccccccc-CC
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQG-DDIIPDIVTVGKPMG-NG 156 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g-~~v~pDi~~~~K~l~-~G 156 (224)
++.+|+++..+...|.+ .+.++++++.++ ++++|.+.|+.....+..+ .+...++.+++|.+| .|
T Consensus 158 ~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 236 (376)
T 2dou_A 158 EAKVLLLNYPNNPTGAV-ADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAG 236 (376)
T ss_dssp HEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGG
T ss_pred CceEEEECCCCCCcCcc-CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChh
Confidence 45677776446667766 467788877776 7887766653111122211 013445668999998 78
Q ss_pred cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhh
Q psy6205 157 HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 157 ~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~ 222 (224)
+++|++++++++++.+... ....+++.|+++++++.++|+..++ +...++++++.++|.+.|++
T Consensus 237 ~r~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 302 (376)
T 2dou_A 237 FRLGFALGSEEALARLERV--KGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKG 302 (376)
T ss_dssp GCCEEEEECHHHHHHHHHH--HHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred heeEEEecCHHHHHHHHHH--HHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988643 3446778899999999999876421 34566677888888888765
No 83
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=98.66 E-value=1.1e-07 Score=83.97 Aligned_cols=143 Identities=11% Similarity=0.086 Sum_probs=95.2
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCC-CCcccCCHHHHHHHHHH------------HHhCCcccccc---chhhhhc
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSC-GGQIIPPANYLREVYKH------------VQVGFGRVGTH---WWAFQLQ 138 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~-~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~---~~~~~~~ 138 (224)
+++|++.++.......++.+|++.|...+ .|.+ .+.+.++++.++ ++++|...|.. ++..+..
T Consensus 200 ~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~-~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~ 278 (448)
T 3aow_A 200 VEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVT-MNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNE 278 (448)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTT
T ss_pred HHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCC-CCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCC
Confidence 45566555411001136788877775444 6765 567777777777 77777555531 2233333
Q ss_pred CCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHH--hh--hhHHHHHHHHHH
Q psy6205 139 GDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVL--ET--ENLREHALDVGN 214 (224)
Q Consensus 139 g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~--~~--~~l~~~~~~~g~ 214 (224)
+ ...++.+++|.++.|+++|++++++++++.+... ....|++.|+++++++.++|+.. ++ +.+.++.++..+
T Consensus 279 ~--~vi~~~S~SK~~~~GlriG~v~~~~~l~~~l~~~--~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~~~~~~~~~~~ 354 (448)
T 3aow_A 279 G--RVIYLGTFSKILAPGFRIGWMVGDPGIIRKMEIA--KQSTDLCTNVFGQVVAWRYVDGGYLEKHIPEIRKFYKPRRD 354 (448)
T ss_dssp S--CEEEEEESTTTTCGGGCCEEEEECHHHHHHHHHH--HHHHHSSCCHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH
T ss_pred C--CEEEEccchhhccccccEEEEEeCHHHHHHHHHH--HHHhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 3 5567889999999889999999999999988643 23356778999999999988753 11 234555567777
Q ss_pred HHHHhhhh
Q psy6205 215 QLHTPKKE 222 (224)
Q Consensus 215 ~l~~~l~~ 222 (224)
++.+.|++
T Consensus 355 ~l~~~L~~ 362 (448)
T 3aow_A 355 AMLEALEE 362 (448)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777765
No 84
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=98.64 E-value=1.2e-07 Score=80.89 Aligned_cols=125 Identities=12% Similarity=0.112 Sum_probs=88.6
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-----------HHhCCccccccchhh-hhcCCCCCCchhccccccc-CCc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-----------VQVGFGRVGTHWWAF-QLQGDDIIPDIVTVGKPMG-NGH 157 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----------v~tG~GrtG~~~~~~-~~~g~~v~pDi~~~~K~l~-~G~ 157 (224)
++.+|++...+...|.+. +.+.++++.++ ++++|++... ++.. +.++ ....+.+++|.+| .|+
T Consensus 146 ~~~~v~l~~p~nptG~~~-~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~--~~i~~~s~sK~~g~~G~ 221 (356)
T 1fg7_A 146 GVKVVYVCSPNNPTGQLI-NPQDFRTLLELTRGKAIVVADEAYIEFCPQAS-LAGWLAEYP--HLAILRTLSKAFALAGL 221 (356)
T ss_dssp TEEEEEEESSCTTTCCCC-CHHHHHHHHHHHTTTCEEEEECTTGGGSGGGC-SGGGTTTCT--TEEEEEESSSTTCCGGG
T ss_pred CCCEEEEeCCCCCCCCCC-CHHHHHHHHHhCCCCCEEEEEccchhhcCCCc-HHHHHhhCC--CEEEEecchHhhcCchh
Confidence 566777776677778665 56666666554 7777764332 3332 2233 3344668999998 789
Q ss_pred ccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE---TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~---~~~l~~~~~~~g~~l~~~l~~l 223 (224)
++|++++++++.+.+... ..+|+.|+++++++.++|+... -++..+++++..++|.+.|+++
T Consensus 222 r~G~~~~~~~~~~~l~~~----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 286 (356)
T 1fg7_A 222 RCGFTLANEEVINLLMKV----IAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEI 286 (356)
T ss_dssp CCEEEEECHHHHHHHHHH----SCSSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hhEEEEeCHHHHHHHHHh----cCCCCCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999888642 3466899999999999987643 2456677788888888888765
No 85
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=98.64 E-value=9.5e-08 Score=82.52 Aligned_cols=140 Identities=9% Similarity=0.067 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHccCCCCceEEE-EccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCC-
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFF-AESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGD- 140 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi-~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~- 140 (224)
+++|++.++. .++.+|+ +...+...|.+ .+.++++++.++ ++++|.++|........++.
T Consensus 151 ~~~l~~~l~~-----~~~~~v~~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~ 224 (397)
T 2zyj_A 151 LDALEEVLKR-----ERPRFLYLIPSFQNPTGGL-TPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELARE 224 (397)
T ss_dssp HHHHHHHHHH-----CCCSCEEECCBSCTTTCCB-CCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHH
T ss_pred HHHHHHHHhh-----cCCeEEEECCCCcCCCCCc-CCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcc
Confidence 4556665542 2456764 44456667765 466777777776 78888776642223333320
Q ss_pred ---CCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh---hhhHHHHHHHHHH
Q psy6205 141 ---DIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE---TENLREHALDVGN 214 (224)
Q Consensus 141 ---~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~---~~~l~~~~~~~g~ 214 (224)
+....+.+++|.++.|+++|++++++++.+.+... ....+++.|+++++++.++|+... -+.+.+++++..+
T Consensus 225 ~~~~~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 302 (397)
T 2zyj_A 225 AGYPGVIYLGSFSKVLSPGLRVAFAVAHPEALQKLVQA--KQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQ 302 (397)
T ss_dssp HTCCCEEEEEESTTTTCGGGCCEEEECCHHHHHHHHHH--HHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHH
T ss_pred cCCCeEEEEecccccccccceeEEEecCHHHHHHHHHH--HHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 02233557999999889999999999999888643 334567779999999988887532 1244555666777
Q ss_pred HHHHhhhh
Q psy6205 215 QLHTPKKE 222 (224)
Q Consensus 215 ~l~~~l~~ 222 (224)
+|.+.|++
T Consensus 303 ~l~~~L~~ 310 (397)
T 2zyj_A 303 AMLHALDR 310 (397)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777764
No 86
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=98.62 E-value=9.4e-08 Score=82.29 Aligned_cols=128 Identities=9% Similarity=-0.024 Sum_probs=88.6
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchhccccccc-CCc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMG-NGH 157 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~-~G~ 157 (224)
++.+|+++..+...|.+.+ ++.++++.++ ++++|.++|. ......+. +....+.+++|.+| .|+
T Consensus 161 ~~~~v~i~~p~nptG~~~~-~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~-~~~i~~~s~sK~~g~~G~ 237 (391)
T 3h14_A 161 DLAGLMVASPANPTGTMLD-HAAMGALIEAAQAQGASFISDEIYHGIEYEAK-AVTALELT-DECYVINSFSKYFSMTGW 237 (391)
T ss_dssp CCSEEEEESSCTTTCCCCC-HHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC-CCCGGGTC-SSSEEEEESSSTTCCTTS
T ss_pred CCeEEEECCCCCCCCccCC-HHHHHHHHHHHHHcCCEEEEECcchhcccCCC-CcChhhcC-CCEEEEEechhccCCccc
Confidence 5678888877777887664 4557777666 8888877774 22222221 12233337899998 789
Q ss_pred ccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
++|++++++++.+.+... ....|++.|+++++++.++|+..+ -++..++.+++-++|.+.|+++
T Consensus 238 r~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 302 (391)
T 3h14_A 238 RVGWMVVPEDQVRVVERI--AQNMFICAPHASQVAALAALDCDAELQANLDVYKANRKLMLERLPKA 302 (391)
T ss_dssp CCEEEECCGGGHHHHHHH--HHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEeCHHHHHHHHHH--HhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999888643 345788999999999999987211 1345566667777777777653
No 87
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=98.62 E-value=3.5e-08 Score=85.00 Aligned_cols=143 Identities=14% Similarity=0.114 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCcccc--ccchhhhhcCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVG--THWWAFQLQGD 140 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG--~~~~~~~~~g~ 140 (224)
++++++.++ ..+.+.+++++...+...|. ..+.++++++.++ ++++|++.| . .+....+.
T Consensus 156 ~~~l~~~l~---~~~~~~~~~~~~~~~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~- 229 (394)
T 2ay1_A 156 FEGMKADLA---AAKKGDMVLLHGCCHNPTGA-NLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEED-AAGTRLIA- 229 (394)
T ss_dssp HHHHHHHHH---TCCTTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHH-HHHHHHHH-
T ss_pred HHHHHHHHH---hCCCCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccc-hHHHHHHh-
Confidence 455665554 22234566666767776776 4567777777776 788887654 2 22333231
Q ss_pred CCCCchh---ccccccc-CCccccccee---cHHHHHhhhcCC-cccccCCCC-cHHHHHHHHHHHHHH------h--hh
Q psy6205 141 DIIPDIV---TVGKPMG-NGHPVAAVIT---TKEIAKSFQETG-VEYFNTYGG-NPVSCAVANAVMEVL------E--TE 203 (224)
Q Consensus 141 ~v~pDi~---~~~K~l~-~G~p~~av~~---~~~i~~~~~~~~-~~~~~T~~~-~p~~~aaa~a~l~~~------~--~~ 203 (224)
...+|++ +++|.+| .|+++|++++ ++++++.+.... .....+|.+ |+++++++.++|+.. + -+
T Consensus 230 ~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~ 309 (394)
T 2ay1_A 230 SRIPEVLIAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELE 309 (394)
T ss_dssp HHCSSEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred hcCCCEEEEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHH
Confidence 0234533 7899999 7999999998 777655443210 012245554 899999999998754 1 24
Q ss_pred hHHHHHHHHHHHHHHhhhhc
Q psy6205 204 NLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 204 ~l~~~~~~~g~~l~~~l~~l 223 (224)
++.++++++.++|.+.|+++
T Consensus 310 ~~~~~~~~~~~~l~~~L~~~ 329 (394)
T 2ay1_A 310 AVRSGMLRLREQLAGELRDL 329 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 56777788888888887754
No 88
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.61 E-value=1.1e-07 Score=82.69 Aligned_cols=125 Identities=14% Similarity=0.057 Sum_probs=91.9
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCC-CCchh--ccccccc-
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDI-IPDIV--TVGKPMG- 154 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v-~pDi~--~~~K~l~- 154 (224)
++.+|+++..+...|.+. ++++++++.++ ++++|.++|+ .... ..+ + ..|++ +++|.+|
T Consensus 174 ~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~-~~~~-~~~--~~~~~i~~~s~sK~~g~ 248 (409)
T 2gb3_A 174 RTKGIVLSNPCNPTGVVY-GKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGE-FASA-LSI--ESDKVVVIDSVSKKFSA 248 (409)
T ss_dssp TEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC-CCCG-GGS--CCTTEEEEEESTTTTTC
T ss_pred CCeEEEECCCCCCCCCCc-CHHHHHHHHHHHHHcCCEEEEECcccccccCCC-CCCc-ccc--CCCCEEEEecchhccCC
Confidence 678888888777778764 56888888887 7888877664 3333 122 3 34766 6899998
Q ss_pred CCcccccceecH-HHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 155 NGHPVAAVITTK-EIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 155 ~G~p~~av~~~~-~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~~l~~l 223 (224)
.|+++|++++++ ++++.+... ....| +.|+++++++.++|+..+ -+++.++++++.+++.+.|+++
T Consensus 249 ~G~r~G~~~~~~~~l~~~l~~~--~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 317 (409)
T 2gb3_A 249 CGARVGCLITRNEELISHAMKL--AQGRL-APPLLEQIGSVGLLNLDDSFFDFVRETYRERVETVLKKLEEH 317 (409)
T ss_dssp GGGCCEEEECSCHHHHHHHHHH--HHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccceEEEEEECcHHHHHHHHHH--HhccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 689999999998 998887643 22345 889999999999986422 2456777888888888888764
No 89
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=98.60 E-value=1.1e-07 Score=82.39 Aligned_cols=127 Identities=13% Similarity=0.027 Sum_probs=90.9
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchh--ccccccc-C
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMG-N 155 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~-~ 155 (224)
++.+|+++..+...|.+ .+++.++++.++ ++++|.+.+. ......++ .-.+|++ +++|.++ .
T Consensus 174 ~~~~v~i~~p~nptG~~-~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~-~~~~~i~~~s~sK~~~~~ 250 (406)
T 1xi9_A 174 RTKAIAVINPNNPTGAL-YDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGE-HISPGSLT-KDVPVIVMNGLSKVYFAT 250 (406)
T ss_dssp TEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSC-CCCHHHHC-SSSCEEEEEESTTTTCCG
T ss_pred CceEEEEECCCCCCCCC-cCHHHHHHHHHHHHHcCCEEEEEcCccccccCCC-CCCHHHcC-CCceEEEEeccccccCCC
Confidence 57888888877778876 466788888777 7887766443 33444442 0011454 5799998 6
Q ss_pred Ccccccce--ecH----HHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 156 GHPVAAVI--TTK----EIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 156 G~p~~av~--~~~----~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+++|+++ +++ ++++.+... .... ++.|+++++++.++|+...+ +++.++++++.+++.+.|+++
T Consensus 251 G~r~G~~~~~~~~~~~~~l~~~l~~~--~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 323 (406)
T 1xi9_A 251 GWRLGYMYFVDPENKLSEVREAIDRL--ARIR-LCPNTPAQFAAIAGLTGPMDYLKEYMKKLKERRDYIYKRLNEI 323 (406)
T ss_dssp GGCCEEEEEECTTCTTHHHHHHHHHH--HHHT-CCSCSHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ccEEEEEEEecCchhHHHHHHHHHHH--HHhh-cCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 89999999 898 898887642 1112 77899999999999974432 467788889999999988764
No 90
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=98.60 E-value=3.4e-07 Score=78.20 Aligned_cols=137 Identities=13% Similarity=0.080 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
+++|++.++. ..++++|++++.+...|.+.+.++..+.+++. ++. +|... +.... ..+|+
T Consensus 134 ~~~l~~~l~~----~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~-~~~~~---~~~~~----~~~di 201 (386)
T 2dr1_A 134 PEDLDDALRK----NPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSA-MGGAD---IKFDK----WGLDV 201 (386)
T ss_dssp HHHHHHHHHH----CTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTT-BTTBC---CCTTT----TTCSE
T ss_pred HHHHHHHHhc----CCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEcccc-ccCcc---ccccc----cCCcE
Confidence 4566666642 24678999999998899887766666666655 432 32221 12222 34799
Q ss_pred hccc--ccccCCcccccceecHHHHHhhhcC--------------Cc--ccccCCCCcHHHHHHHHHHHHHHhhh----h
Q psy6205 147 VTVG--KPMGNGHPVAAVITTKEIAKSFQET--------------GV--EYFNTYGGNPVSCAVANAVMEVLETE----N 204 (224)
Q Consensus 147 ~~~~--K~l~~G~p~~av~~~~~i~~~~~~~--------------~~--~~~~T~~~~p~~~aaa~a~l~~~~~~----~ 204 (224)
++.+ |.++++.++|++++++++++.+... .. ....+++.|+++++++.++|+.+++. +
T Consensus 202 ~~~s~sK~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~ 281 (386)
T 2dr1_A 202 VFSSSQKAFGVPPGLAIGAFSERFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEK 281 (386)
T ss_dssp EEEETTSTTCCCSSCEEEEECHHHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHH
T ss_pred EEEeccccccCCCceEEEEECHHHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHH
Confidence 8877 9998765689999999998876321 00 12356778999999999999998654 7
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q psy6205 205 LREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 205 l~~~~~~~g~~l~~~l~~l 223 (224)
+.++++++.+++.+.|+++
T Consensus 282 ~~~~~~~~~~~l~~~L~~~ 300 (386)
T 2dr1_A 282 WLEMYEKRAKMVREGVREI 300 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHc
Confidence 8889999999999999865
No 91
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=98.58 E-value=7.1e-07 Score=76.93 Aligned_cols=136 Identities=13% Similarity=0.101 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
+++|++.++. +++.+|++++.+...|.+.+.++..+.+++. +++ +|.. .+..+.++ +|+
T Consensus 127 ~~~l~~~i~~-----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~-~~~~---~~~~~~~~----~d~ 193 (411)
T 3nnk_A 127 PDQVEDAVKR-----IRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATAS-LGGN---PLETDVWG----LDA 193 (411)
T ss_dssp HHHHHHHHHH-----HCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTT-BTTB---CCCTTTTT----CSE
T ss_pred HHHHHHHHhh-----CCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcc-cCCc---ccchhccC----CcE
Confidence 4566666652 2678999999999999998888888888877 432 3221 12333333 566
Q ss_pred hc--ccccccCCcccccceecHHHHHhhhcCC----------------------------------cccccCCCCcHHHH
Q psy6205 147 VT--VGKPMGNGHPVAAVITTKEIAKSFQETG----------------------------------VEYFNTYGGNPVSC 190 (224)
Q Consensus 147 ~~--~~K~l~~G~p~~av~~~~~i~~~~~~~~----------------------------------~~~~~T~~~~p~~~ 190 (224)
++ ++|.++++.++|++++++++.+.+.... .....+++.|+.++
T Consensus 194 ~~~s~~K~l~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (411)
T 3nnk_A 194 VSAGMQKCLGGPSGTSPITLSARMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTAL 273 (411)
T ss_dssp EECCSTTTTCCCSSEEEEEECHHHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHH
T ss_pred EEecCccccCCCCceEEEEECHHHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHH
Confidence 55 5699888788999999999988775421 00113345688899
Q ss_pred HHHHHHHHHHhhh---hHHHHHHHHHHHHHHhhhhc
Q psy6205 191 AVANAVMEVLETE---NLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 191 aaa~a~l~~~~~~---~l~~~~~~~g~~l~~~l~~l 223 (224)
+++.++++.+.++ ++.++++++.++|.+.|+++
T Consensus 274 ~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 309 (411)
T 3nnk_A 274 FGARECARLILQEGLDYGIARHKLHGDALVKGIQAM 309 (411)
T ss_dssp HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999998654 78889999999999999875
No 92
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=98.58 E-value=6.3e-07 Score=76.31 Aligned_cols=136 Identities=11% Similarity=0.071 Sum_probs=96.5
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------------HHhCCccccccchhhhhcCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------------VQVGFGRVGTHWWAFQLQGD 140 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------------v~tG~GrtG~~~~~~~~~g~ 140 (224)
+++|++.+.. +++.+|+++..+...|.+. +.+.++++.++ ++++|+..+. ......++
T Consensus 146 ~~~l~~~l~~-----~~~~~v~~~~~~nptG~~~-~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~- 217 (367)
T 3euc_A 146 RGAMLAAMAE-----HQPAIVYLAYPNNPTGNLF-DAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESW-MSRLTDFG- 217 (367)
T ss_dssp HHHHHHHHHH-----HCCSEEEEESSCTTTCCCC-CHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCS-GGGGGTCT-
T ss_pred HHHHHHHhhc-----cCCCEEEEcCCCCCCCCCC-CHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccch-HHHHhhCC-
Confidence 4556666542 2567888887777788765 55567777654 5566654443 33444444
Q ss_pred CCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHh
Q psy6205 141 DIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLHTP 219 (224)
Q Consensus 141 ~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~~ 219 (224)
...++.+++|....|+++|++++++++++.+... ..+|+.|+++++++.++|+..+. ++..++++++.++|.+.
T Consensus 218 -~~i~~~s~sK~~~~G~r~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 292 (367)
T 3euc_A 218 -NLLVMRTVSKLGLAGIRLGYVAGDPQWLEQLDKV----RPPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEG 292 (367)
T ss_dssp -TEEEEEECCCTTSCSCCEEEEEECHHHHHHHGGG----CCSSCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CEEEEecchhhcccccCceeeeeCHHHHHHHHHh----CCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 5567778999944679999999999999888642 35788999999999999987321 45677788888888888
Q ss_pred hhhc
Q psy6205 220 KKEN 223 (224)
Q Consensus 220 l~~l 223 (224)
|+++
T Consensus 293 l~~~ 296 (367)
T 3euc_A 293 MAAH 296 (367)
T ss_dssp HHTS
T ss_pred HHhC
Confidence 8765
No 93
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=98.58 E-value=6.8e-08 Score=84.88 Aligned_cols=131 Identities=14% Similarity=0.053 Sum_probs=92.1
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcC--CCCCCchhccccccc-
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQG--DDIIPDIVTVGKPMG- 154 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g--~~v~pDi~~~~K~l~- 154 (224)
.++.+|+++..+...|.+. +.+.++++.++ ++++|++.|........+. .++..++.+++|.+|
T Consensus 208 ~~~~~v~l~~p~NPtG~~~-~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~ 286 (449)
T 3qgu_A 208 KRTDIIFFCSPNNPTGAAA-TRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGF 286 (449)
T ss_dssp CCCSEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGGGTC
T ss_pred CCCCEEEEeCCCCCCCCcC-CHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhhcCC
Confidence 3567888886666677654 66678888776 8888877763122333332 014455778999998
Q ss_pred CCcccccceecHHHHHh--------hhcCCcccccCCCCcHHHHHHHHHHHHHH--h-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 155 NGHPVAAVITTKEIAKS--------FQETGVEYFNTYGGNPVSCAVANAVMEVL--E-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 155 ~G~p~~av~~~~~i~~~--------~~~~~~~~~~T~~~~p~~~aaa~a~l~~~--~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
.|+++|++++++++++. +... ....+++.++++++++.++|+.. + -+++.++++++.++|.+.|+++
T Consensus 287 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 364 (449)
T 3qgu_A 287 TGVRLGWTVVPKALKYANGEPVHADWNRV--MTTCFNGASNIVQAGGLACLQPEGLKEMNAMIKFYKENAQILKTTFTEM 364 (449)
T ss_dssp TTCCCEEEECCTTCBCTTSCBHHHHHHHH--HHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccceeEEEecCHHHHhhhhhhHHHHHHHH--hhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 78999999999988752 2211 22345688999999999998762 1 3467888889999999998865
No 94
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=98.55 E-value=2.2e-07 Score=79.37 Aligned_cols=124 Identities=9% Similarity=-0.069 Sum_probs=85.8
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhh---------hcCCCCCCchhcc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQ---------LQGDDIIPDIVTV 149 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~---------~~g~~v~pDi~~~ 149 (224)
++.+|++...+...|.+. +.+.++++.++ ++++|.++|. ..... .++ ...++.++
T Consensus 154 ~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~i~~~s~ 229 (376)
T 3ezs_A 154 EVDLVILNSPNNPTGRTL-SLEELISWVKLALKHDFILINDECYSEIYENTP-PPSLLEACMLAGNEAFK--NVLVIHSL 229 (376)
T ss_dssp HCSEEEECSSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSC-CCCHHHHHHHTTCTTCT--TEEEEEES
T ss_pred CCCEEEEcCCCCCcCCCC-CHHHHHHHHHHHHHcCcEEEEEccchhhccCCC-CCCHHHccccccccccC--cEEEEecc
Confidence 345666654466677765 55557777665 8888877774 33332 233 55667789
Q ss_pred ccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHHHHhh
Q psy6205 150 GKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET-ENLREHALDVGNQLHTPK 220 (224)
Q Consensus 150 ~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~-~~l~~~~~~~g~~l~~~l 220 (224)
+|.+| .|+++|++++++++++.+... ....+++.|+++++++.++|+..+. ++..++++++-+++.+.|
T Consensus 230 sK~~g~~G~r~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l 300 (376)
T 3ezs_A 230 SKRSSAPGLRSGFIAGDSRLLEKYKAF--RAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLARKIF 300 (376)
T ss_dssp TTTTTCGGGCCEEEEECHHHHHHHHHH--HTTTCCCCCHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHS
T ss_pred hhccCCccceeEEEeeCHHHHHHHHHH--HhhhcCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHh
Confidence 99997 789999999999999988653 3456889999999999999885221 344455555556665554
No 95
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=98.54 E-value=2.2e-07 Score=80.50 Aligned_cols=129 Identities=13% Similarity=0.016 Sum_probs=90.5
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCc----hhcccccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPD----IVTVGKPM 153 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pD----i~~~~K~l 153 (224)
+++.+|+++..+...|.+ .+.+.++++.++ ++++|+..|........++ -.+| +.+++|.+
T Consensus 162 ~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~ 238 (400)
T 3asa_A 162 THIDILCLCSPNNPTGTV-LNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIP--DARFCAIEINSFSKPL 238 (400)
T ss_dssp CCCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGST--TGGGTEEEEEECCGGG
T ss_pred cCccEEEEeCCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCC--CCCCceEEEecchhhc
Confidence 357788887767667866 467777777766 7787766653111222222 1244 56899999
Q ss_pred c-CCcccccceecHHH-------HHhhhcCCcccccCC-CCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 154 G-NGHPVAAVITTKEI-------AKSFQETGVEYFNTY-GGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 154 ~-~G~p~~av~~~~~i-------~~~~~~~~~~~~~T~-~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
| .|+++|++++++++ .+.+... ....+| +.|+++++++.++|+...-+++.++++++.++|.+.|+++
T Consensus 239 g~~GlriG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 315 (400)
T 3asa_A 239 GFAGIRLGWTVIPQELTYADGHFVIQDWER--FLSTTFNGASIPAQEAGVAGLSILPQLEAIHYYRENSDLLRKALLAT 315 (400)
T ss_dssp TTTTCCCEEEECCTTCBCTTSCBHHHHHHH--HHHHHCCCCCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcchheeEEeeChhhccchhhhHHHHHHH--HhccCccCCChHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 8 78999999999887 5544321 223445 5899999999999987544578889999999999998765
No 96
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=97.94 E-value=9.8e-09 Score=88.71 Aligned_cols=127 Identities=8% Similarity=0.064 Sum_probs=84.3
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCcccccc---chhhhh--cCCCCCCchhcccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTH---WWAFQL--QGDDIIPDIVTVGKPM 153 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~---~~~~~~--~g~~v~pDi~~~~K~l 153 (224)
++.+|+++..+...|.+ .++++++++.++ ++++|.++|.. ++.... .+ ..+++.+++|.+
T Consensus 164 ~~~~v~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~--~~i~~~s~sK~~ 240 (392)
T 3b1d_A 164 DVKLYLLCNPHNPGGRV-WEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKD--FALVLSSATKTF 240 (392)
Confidence 56677776666667765 455677777766 78888776631 223222 33 667788999999
Q ss_pred c-CCcccccceecH-HHHHhhhcCCcccccCC-CCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhh
Q psy6205 154 G-NGHPVAAVITTK-EIAKSFQETGVEYFNTY-GGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 154 ~-~G~p~~av~~~~-~i~~~~~~~~~~~~~T~-~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~ 222 (224)
+ +|+++|++++++ ++++.+... ....++ +.|+++++++.++|+..++ +++.++.+++-++|.+.|++
T Consensus 241 ~~~G~r~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~ 312 (392)
T 3b1d_A 241 NIAGTKNSYAIIENPTLCAQFKHQ--QLVNNHHEVSSLGYIATETAYRYGKPWLVALKAVLEENIQFAVEYFAQ 312 (392)
Confidence 8 789999999975 488877643 223333 5699999999999975321 23444555555666665544
No 97
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=98.53 E-value=4.2e-07 Score=77.50 Aligned_cols=125 Identities=9% Similarity=0.079 Sum_probs=85.0
Q ss_pred CceEEE-EccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhh-hhcCCCCCCchhccccccc-C
Q psy6205 91 RPCAFF-AESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAF-QLQGDDIIPDIVTVGKPMG-N 155 (224)
Q Consensus 91 ~iaavi-~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~-~~~g~~v~pDi~~~~K~l~-~ 155 (224)
++.+|+ .+| +...|.+ .++++++++.++ ++++|++.+..+... +.++ ....+.+++|.+| +
T Consensus 146 ~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~i~~~s~sK~~~~~ 221 (364)
T 1lc5_A 146 DLDCLFLCTP-NNPTGLL-PERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNP--HIWVLRSLTKFYAIP 221 (364)
T ss_dssp TCCEEEEESS-CTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCT--TEEEEEESTTTTTCT
T ss_pred CCCEEEEeCC-CCCCCCC-CCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCC--CEEEEEECchhhcCC
Confidence 445555 566 5556765 566788887776 777776545312221 2232 3344558999998 7
Q ss_pred Ccccccce-ecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 156 GHPVAAVI-TTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 156 G~p~~av~-~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+++|+++ +++++++.+... ..+|+.|+++++++.++|+.-+ -+...++++++.++|.+.|+++
T Consensus 222 G~r~G~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 287 (364)
T 1lc5_A 222 GLRLGYLVNSDDAAMARMRRQ----QMPWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQL 287 (364)
T ss_dssp TTCCEEEECCCHHHHHHHHHH----SCTTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ccceEEEEECCHHHHHHHHHh----CCCCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 89999999 999999887642 2478899999999998887521 1245556677777888887754
No 98
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=98.52 E-value=1.2e-07 Score=81.62 Aligned_cols=127 Identities=12% Similarity=0.022 Sum_probs=88.0
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhh--------cCCCCCCchhccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQL--------QGDDIIPDIVTVG 150 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~--------~g~~v~pDi~~~~ 150 (224)
++.+|+++..+...|.+.+..+ ++++.++ ++++|.++|...+.... .+ ..+++.+++
T Consensus 168 ~~~~v~l~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~s~s 244 (396)
T 3jtx_A 168 RTKLVFVCSPNNPSGSVLDLDG-WKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQ--KLLMFTSLS 244 (396)
T ss_dssp TEEEEEEESSCTTTCCCCCHHH-HHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCT--TEEEEEEST
T ss_pred CcEEEEEECCCCCCCCcCCHHH-HHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccC--cEEEEeccc
Confidence 4667777655777787665554 5555554 88888777721233221 33 567778999
Q ss_pred cccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhh
Q psy6205 151 KPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 151 K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~ 222 (224)
|.++ .|+++|++++++++++.+... ...+|++.|+++++++.++|+.-+ -+...+++++.-+++.+.|++
T Consensus 245 K~~~~~G~r~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 316 (396)
T 3jtx_A 245 KRSNVPGLRSGFVAGDAELLKNFLLY--RTYHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQ 316 (396)
T ss_dssp TTSSCGGGCCEEEEECHHHHHHHHHH--HHHHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccCCcccceEEEEeCHHHHHHHHHH--HhhcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9976 579999999999999988643 345688999999999999987421 124555666666777777654
No 99
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=98.50 E-value=6.7e-07 Score=77.97 Aligned_cols=138 Identities=8% Similarity=0.036 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEE-ccccCCCCcccCCHHHHHHHHHH------------HHhCCcccccc-c-------h
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFA-ESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTH-W-------W 133 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~-Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~-~-------~ 133 (224)
+++|++.++ . .++.+|++ .| +...|.+. +.+.++++.++ ++++|...+.. . .
T Consensus 171 ~~~l~~~l~----~-~~~~~v~l~~p-~nptG~~~-~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 243 (437)
T 3g0t_A 171 REKLESYLQ----T-GQFCSIIYSNP-NNPTWQCM-TDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQP 243 (437)
T ss_dssp HHHHHHHHT----T-TCCCEEEEESS-CTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCC
T ss_pred HHHHHHHHh----c-CCceEEEEeCC-CCCCCCcC-CHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhh
Confidence 455555542 1 34555555 66 66677665 44556666665 77765443320 1 1
Q ss_pred hhhh-cCCCCCCchhccccccc-CCcccccceecHHHHH-h-----------------hhcCCcccccCCCCcHHHHHHH
Q psy6205 134 AFQL-QGDDIIPDIVTVGKPMG-NGHPVAAVITTKEIAK-S-----------------FQETGVEYFNTYGGNPVSCAVA 193 (224)
Q Consensus 134 ~~~~-~g~~v~pDi~~~~K~l~-~G~p~~av~~~~~i~~-~-----------------~~~~~~~~~~T~~~~p~~~aaa 193 (224)
.... .+ ....+.+++|.++ .|+++|++++++++++ . +... ....+++.|+++++++
T Consensus 244 ~~~~~~~--~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~ 319 (437)
T 3g0t_A 244 SVANYTD--NYILALSSSKAFSYAGQRIGVLMISGKLYEREYPDLEESFGRLRFGEALSSSA--LYALSSGATHSAQWGM 319 (437)
T ss_dssp CGGGTCS--CEEEEEESTTTTSCGGGCCEEEEECHHHHHCBCGGGHHHHSCSBHHHHHHTTH--HHHHHSSSCHHHHHHH
T ss_pred ccCCCCC--cEEEEEcCccCCCCccceeEEEEECHHHhhhhhhcccccccccchhHHHHHHH--HhhhcCCCCHHHHHHH
Confidence 2211 22 3333557999999 7899999999999998 6 4321 2345788999999999
Q ss_pred HHHHHHHh-----hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 194 NAVMEVLE-----TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 194 ~a~l~~~~-----~~~l~~~~~~~g~~l~~~l~~l 223 (224)
.++|+..+ -++..++++++.+++.+.|+++
T Consensus 320 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 354 (437)
T 3g0t_A 320 AAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDN 354 (437)
T ss_dssp HHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999875 4578888999999999999875
No 100
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=98.49 E-value=1.9e-07 Score=80.27 Aligned_cols=139 Identities=11% Similarity=0.116 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCcccc--ccchhhhhcCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVG--THWWAFQLQGD 140 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG--~~~~~~~~~g~ 140 (224)
+++|++.++ +.+.+..++++...+...|. ..+.+.++++.++ ++++|++.| . ++....+.
T Consensus 159 ~~~l~~~l~---~~~~~~~~v~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~- 232 (396)
T 2q7w_A 159 FDALINSLN---EAQAGDVVLFHGCCHNPTGI-DPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEED-AEGLRAFA- 232 (396)
T ss_dssp HHHHHHHHT---TCCTTCEEEEECSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHH-THHHHHHH-
T ss_pred HHHHHHHHH---hCCCCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEecccccccCCccch-hHHHHHHH-
Confidence 445555543 22223444554444444565 5667777777776 778887654 2 33444442
Q ss_pred CCCCc----hhccccccc-CCccccccee---cHH----HHHhhhcCCcccccCCCC-cHHHHHHHHHHHHHH------h
Q psy6205 141 DIIPD----IVTVGKPMG-NGHPVAAVIT---TKE----IAKSFQETGVEYFNTYGG-NPVSCAVANAVMEVL------E 201 (224)
Q Consensus 141 ~v~pD----i~~~~K~l~-~G~p~~av~~---~~~----i~~~~~~~~~~~~~T~~~-~p~~~aaa~a~l~~~------~ 201 (224)
..+| +.+++|.+| .|+++|++++ +++ +.+.+.. ....++.+ |+++++++.++|+.. +
T Consensus 233 -~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~ 308 (396)
T 2q7w_A 233 -AMHKELIVASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKA---AIRANYSNPPAHGASVVATILSNDALRAIWE 308 (396)
T ss_dssp -HHCSCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHH---HHHTTTSSCCHHHHHHHHHHHTSHHHHHHHH
T ss_pred -hcCCcEEEEEeccccccccccccceEEEEcCCHHHHHHHHHHHHH---HHhhccCCCCcHHHHHHHHHhcChhhHHHHH
Confidence 2234 447899999 7999999997 664 4444432 12235544 999999999988653 1
Q ss_pred --hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 202 --TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 202 --~~~l~~~~~~~g~~l~~~l~~l 223 (224)
-+.+.++++++.+++.+.|+++
T Consensus 309 ~~~~~~~~~~~~~~~~l~~~L~~~ 332 (396)
T 2q7w_A 309 QELTDMRQRIQRMRQLFVNTLQEK 332 (396)
T ss_dssp HHHHHC-CHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1345566777888888888765
No 101
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=98.49 E-value=6.9e-07 Score=76.97 Aligned_cols=133 Identities=11% Similarity=0.032 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHccCCCCceEEEE-ccccCCCCcccCCHHHHHHHHHH--------HHhC-CccccccchhhhhcCCCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFA-ESLQSCGGQIIPPANYLREVYKH--------VQVG-FGRVGTHWWAFQLQGDDIIP 144 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~-Epv~~~~G~~~~~~~~l~~~~~~--------v~tG-~GrtG~~~~~~~~~g~~v~p 144 (224)
+++|++.++. .++++|++ +|..+ ...+.++..+.+++. +++. +...|. ... .+. .+
T Consensus 152 ~~~l~~~l~~-----~~~~~v~~~~p~~~---~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~-~~~--~~~---~~ 217 (407)
T 2dkj_A 152 LEEVRRLALE-----HRPKVIVAGASAYP---RFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGL-HPN--PLP---YA 217 (407)
T ss_dssp HHHHHHHHHH-----HCCSEEEECCSSCC---SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTC-SCC--CTT---TC
T ss_pred HHHHHHHHhh-----cCCeEEEEeccccC---CCCCHHHHHHHHHHcCCEEEEEccccccccccCc-cCC--ccc---cc
Confidence 4566665542 14567777 78775 444444444444444 5443 433343 111 111 27
Q ss_pred chh--cccccccCCcccccceec-HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHH
Q psy6205 145 DIV--TVGKPMGNGHPVAAVITT-KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQLHT 218 (224)
Q Consensus 145 Di~--~~~K~l~~G~p~~av~~~-~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~~ 218 (224)
|++ +++|+|+|+ ..|+++++ +++++.+... ..++.+.+.++..++++.++|+.+.+ +++.++++++.++|.+
T Consensus 218 di~~~s~sK~l~g~-~~G~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 295 (407)
T 2dkj_A 218 HVVTSTTHKTLRGP-RGGLILSNDPELGKRIDKL-IFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAE 295 (407)
T ss_dssp SEEEEESSGGGCCC-SCEEEEESCHHHHHHHHHH-HTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEeccccCCCC-CceEEEECCHHHHHHHHhh-hcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 888 789999854 56999999 8998877542 12345666788888888999998754 5788899999999999
Q ss_pred hhhhc
Q psy6205 219 PKKEN 223 (224)
Q Consensus 219 ~l~~l 223 (224)
.|+++
T Consensus 296 ~L~~~ 300 (407)
T 2dkj_A 296 ELARR 300 (407)
T ss_dssp HHHHT
T ss_pred HHHhC
Confidence 99865
No 102
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=98.48 E-value=4.7e-07 Score=78.02 Aligned_cols=125 Identities=14% Similarity=0.074 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
+++|++.++ +++++|++|++++..|.+.+.++..+.+++. +++++... . .. .++ +|+
T Consensus 127 ~~~l~~~i~------~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~-~-~~---~~~----~di 191 (386)
T 1cs1_A 127 EQALRAALA------EKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQ-N-PL---ALG----ADL 191 (386)
T ss_dssp HHHHHHHHH------TCCSEEEEECSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTTCTTTC-C-GG---GGT----CSE
T ss_pred HHHHHHhhc------cCCcEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCcccccC-C-cc---ccC----ceE
Confidence 455555553 3678999999999999888755555555555 77666332 1 11 233 566
Q ss_pred h--cccccccCC-ccc-ccceecH-HHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHH
Q psy6205 147 V--TVGKPMGNG-HPV-AAVITTK-EIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQL 216 (224)
Q Consensus 147 ~--~~~K~l~~G-~p~-~av~~~~-~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l 216 (224)
+ +++|.++++ .++ |++++++ ++++.+... ....++..||+++++++++++.+.+ +.+.++.+.+.++|
T Consensus 192 ~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l 266 (386)
T 1cs1_A 192 VLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWW--ANNIGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYL 266 (386)
T ss_dssp EEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHH--HHHHTCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCcccccCCCCceeEEEEeCcHHHHHHHHHH--HHhcCCCCCHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 5 799999875 455 8888885 888877643 3335677899999998888876632 33444444444444
No 103
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=98.47 E-value=8.1e-07 Score=77.50 Aligned_cols=138 Identities=7% Similarity=-0.031 Sum_probs=91.2
Q ss_pred HHHHHHHHHHHccCCCCce-EEEEccccCCCCcccCCHHHHHHH----HH-----H--------HHhCCccccccchhhh
Q psy6205 75 AQDVQDLIEAMGRNGKRPC-AFFAESLQSCGGQIIPPANYLREV----YK-----H--------VQVGFGRVGTHWWAFQ 136 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~ia-avi~Epv~~~~G~~~~~~~~l~~~----~~-----~--------v~tG~GrtG~~~~~~~ 136 (224)
+++|++.++. .+.+.. .++.+| +...|.+. +.++++++ ++ . ++++|.+.|..+....
T Consensus 176 ~~~l~~~l~~---~~~~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 250 (430)
T 2x5f_A 176 TDSLVEALQS---YNKDKVIMILNYP-NNPTGYTP-THKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLF 250 (430)
T ss_dssp SHHHHHHHHH---CCSSEEEEEECSS-CTTTCCCC-CHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHH
T ss_pred HHHHHHHHHh---cCCCCEEEEEcCC-CCCCCCcC-CHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHH
Confidence 4556666653 233444 455667 66678654 54555544 45 4 7777766663111221
Q ss_pred -hc-CCCCCCc------hhccccccc-CCccccccee---cHHHHHhhhcCCcccc----cCCCCcHHHHHHHHHHHH-H
Q psy6205 137 -LQ-GDDIIPD------IVTVGKPMG-NGHPVAAVIT---TKEIAKSFQETGVEYF----NTYGGNPVSCAVANAVME-V 199 (224)
Q Consensus 137 -~~-g~~v~pD------i~~~~K~l~-~G~p~~av~~---~~~i~~~~~~~~~~~~----~T~~~~p~~~aaa~a~l~-~ 199 (224)
.+ + ..++ +.+++|.+| .|+++|++++ ++++.+.+... ... .|++.|+++++++.++|+ .
T Consensus 251 ~~~~~--~~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~a~~~~l~~~ 326 (430)
T 2x5f_A 251 TALTN--LHSNAILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEVLEAK--VKGLIRSNISSGPLPTQSAVKHVLKNN 326 (430)
T ss_dssp HHHHT--TCCTTEEEEEEEEHHHHTTCGGGCCEEEEEBCCCHHHHHHHHHH--HHHHHHTTTSSCCHHHHHHHHHHHHSC
T ss_pred HHHhh--ccCCcceEEEEEecccCCCCCCCCeEEEEEecCCHHHHHHHHHH--HhhhhhcccCCCChHHHHHHHHHHccC
Confidence 22 2 3455 447899998 7899999999 99999887643 222 688899999999999998 3
Q ss_pred ---Hhh-hhHHHHHHHHHHHHHHhhh
Q psy6205 200 ---LET-ENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 200 ---~~~-~~l~~~~~~~g~~l~~~l~ 221 (224)
+++ ++..+++++..++|.+.|+
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~l~~~L~ 352 (430)
T 2x5f_A 327 KQFDKEIEQNIQTLKERYEVTKEVVY 352 (430)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332 3477778888888888887
No 104
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=98.47 E-value=7.9e-07 Score=75.80 Aligned_cols=128 Identities=5% Similarity=-0.037 Sum_probs=88.1
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhcccccccCCccccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNGHPVAA 161 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G~p~~a 161 (224)
.++.+|++++.+...|.+.+.++..+.+++. +++++++. +..+.++ +...+.+++|.++++.++++
T Consensus 143 ~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~----~~~~~~~--~d~~~~s~~K~l~~~~G~g~ 216 (376)
T 3f0h_A 143 QNFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADP----FNMNECG--ADVMITGSQKVLACPPGISV 216 (376)
T ss_dssp SCCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSC----CCHHHHT--CSEEEEETTTTTCCCSSCEE
T ss_pred cCceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCcc----ccccccC--ccEEEecCcccccCCCceEE
Confidence 4688999999999999988844444444444 66655432 3345566 54444566799987777899
Q ss_pred ceecHHHHHhhhcCC-cc--------------cccCCCCcHHHHHHHHHHHHHHhhh----hHHHHHHHHHHHHHHhhhh
Q psy6205 162 VITTKEIAKSFQETG-VE--------------YFNTYGGNPVSCAVANAVMEVLETE----NLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 162 v~~~~~i~~~~~~~~-~~--------------~~~T~~~~p~~~aaa~a~l~~~~~~----~l~~~~~~~g~~l~~~l~~ 222 (224)
+++++++.+.+.... .. ....++.+..+++++.++++.++++ .+.++.+++.+++.+.|++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 296 (376)
T 3f0h_A 217 IVLAPRGVERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKD 296 (376)
T ss_dssp EEECHHHHHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTT
T ss_pred EEECHHHHHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998876421 01 1124455556668888899988654 5777788888888888876
Q ss_pred c
Q psy6205 223 N 223 (224)
Q Consensus 223 l 223 (224)
+
T Consensus 297 ~ 297 (376)
T 3f0h_A 297 L 297 (376)
T ss_dssp S
T ss_pred c
Confidence 5
No 105
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=98.46 E-value=6.6e-07 Score=75.75 Aligned_cols=138 Identities=11% Similarity=-0.006 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-----------HHhCCcccccc--chh-hhhc-C
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-----------VQVGFGRVGTH--WWA-FQLQ-G 139 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----------v~tG~GrtG~~--~~~-~~~~-g 139 (224)
+++|++.+. ...++.+|+++..+...|.+.+.++ ++++.+. ++.+|.+.+.. ... ...+ +
T Consensus 129 ~~~l~~~l~----~~~~~~~v~l~~p~nptG~~~~~~~-l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 203 (354)
T 3ly1_A 129 IEGLKAAVA----AYSGPSIVYLVNPNNPTGTITPADV-IEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAE 203 (354)
T ss_dssp HHHHHHHHH----TCSSCEEEEEESSCTTTCCCCCHHH-HHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCS
T ss_pred HHHHHHHhc----cCCCCCEEEEeCCCCCcCCCcCHHH-HHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCC
Confidence 455665554 1246778888777777887765555 5555443 77777666531 111 1122 2
Q ss_pred CCCCCchhccccccc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHH
Q psy6205 140 DDIIPDIVTVGKPMG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLH 217 (224)
Q Consensus 140 ~~v~pDi~~~~K~l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~ 217 (224)
....+.+++|.+| .|+++|++++++++.+.+... ...++.|+++++++.++|+..+ -++..++++++.++|.
T Consensus 204 --~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~ 277 (354)
T 3ly1_A 204 --NIILLKTFSKIHAMAGMRVGYAVAHPTVIALMGRY----VAGEKINFSGVDAALASMNDSAFITYSKKSNDVSRQILL 277 (354)
T ss_dssp --SEEEEEESSSTTCCGGGCCEEEECCHHHHHHHGGG----TTCSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred --CEEEEeeChhhccChhhhheeeecCHHHHHHHHHh----cCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 3344557899998 789999999999999988643 2347899999999999987542 2456677778888888
Q ss_pred Hhhhhc
Q psy6205 218 TPKKEN 223 (224)
Q Consensus 218 ~~l~~l 223 (224)
+.|+++
T Consensus 278 ~~l~~~ 283 (354)
T 3ly1_A 278 KALEDL 283 (354)
T ss_dssp HHHHHH
T ss_pred HHHHHC
Confidence 887654
No 106
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=98.46 E-value=1.9e-06 Score=72.37 Aligned_cols=136 Identities=13% Similarity=0.068 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
+++|++.++. + ++.+|+++..+...|.+.+.++..+.+++. ++ ++|+.. +....++ +|+
T Consensus 113 ~~~l~~~l~~---~--~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~-~~~~~~---~~~~~~~----~d~ 179 (353)
T 2yrr_A 113 PEAVARALKR---R--RYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVT-TLGMLP---FSMRAMG----VDY 179 (353)
T ss_dssp HHHHHHHHHH---S--CCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTT-TTTTSC---CCHHHHT----CSE
T ss_pred HHHHHHHHHh---C--CCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCc-cccccc---ccccccC----ceE
Confidence 4556665542 2 567899999998889888866666666666 55 565543 2233344 687
Q ss_pred hcc--cccccCCcccccceecHHHHHhhhc-CCc------------ccccCCCCcHHHHHHHHHHHHHHhhh---hHHHH
Q psy6205 147 VTV--GKPMGNGHPVAAVITTKEIAKSFQE-TGV------------EYFNTYGGNPVSCAVANAVMEVLETE---NLREH 208 (224)
Q Consensus 147 ~~~--~K~l~~G~p~~av~~~~~i~~~~~~-~~~------------~~~~T~~~~p~~~aaa~a~l~~~~~~---~l~~~ 208 (224)
+++ +|.++++..+|++++++++++.+.. ... ....+++.|+.+++++.++|+.++++ ++.++
T Consensus 180 ~~~s~~K~~~~~~g~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~ 259 (353)
T 2yrr_A 180 AFTGSQKCLSAPPGLAPIAASLEARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERR 259 (353)
T ss_dssp EECCTTSTTCCCSSCEEEEECHHHHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred EEecCcccccCCCceEEEEECHHHHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 765 6988876668999999999887641 000 11234456788888888999988654 67888
Q ss_pred HHHHHHHHHHhhhhc
Q psy6205 209 ALDVGNQLHTPKKEN 223 (224)
Q Consensus 209 ~~~~g~~l~~~l~~l 223 (224)
.+++.+++.+.|+++
T Consensus 260 ~~~~~~~l~~~L~~~ 274 (353)
T 2yrr_A 260 AREVYAWVLEELKAR 274 (353)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHC
Confidence 999999999998764
No 107
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=98.45 E-value=2.1e-06 Score=72.45 Aligned_cols=137 Identities=10% Similarity=0.063 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
+++|++.++. + .++.+|++.......|.+.+.++..+.+++. +++ +|... +..+. ..+|+
T Consensus 119 ~~~l~~~l~~---~-~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~-~~~~~---~~~~~----~~~di 186 (366)
T 1m32_A 119 VQAIDAILNA---D-PTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSS-FGGIP---MDIAA----LHIDY 186 (366)
T ss_dssp HHHHHHHHHH---C-TTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTT-TTTSC---CCTTT----TTCSE
T ss_pred HHHHHHHHhc---C-CCeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCcc-ccCcC---ccccc----cCccE
Confidence 4566666652 2 2455666665555678888766666666665 443 43332 11122 23788
Q ss_pred hc--ccccccCCcccccceecHHHHHhhhcCCccc----------------ccCCCCcHHHHHHHHHHHHHHhhh----h
Q psy6205 147 VT--VGKPMGNGHPVAAVITTKEIAKSFQETGVEY----------------FNTYGGNPVSCAVANAVMEVLETE----N 204 (224)
Q Consensus 147 ~~--~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~----------------~~T~~~~p~~~aaa~a~l~~~~~~----~ 204 (224)
++ ++|.++++.++|++++++++++.+......+ ...++.|+.+++++.++|+.+++. .
T Consensus 187 ~~~s~~K~~~~~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~ 266 (366)
T 1m32_A 187 LISSANKCIQGVPGFAFVIAREQKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAA 266 (366)
T ss_dssp EEEESSSTTCCCSSEEEEEEEHHHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred EEecCcccccCCCceEEEEECHHHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhH
Confidence 75 6899987777899999999988775421111 013788999999999999998653 5
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q psy6205 205 LREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 205 l~~~~~~~g~~l~~~l~~l 223 (224)
+.++++++.+++.+.|+++
T Consensus 267 ~~~~~~~~~~~l~~~L~~~ 285 (366)
T 1m32_A 267 RHQRYQQNQRSLVAGMRAL 285 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHC
Confidence 7888999999999999864
No 108
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=98.45 E-value=1e-06 Score=75.12 Aligned_cols=141 Identities=11% Similarity=-0.003 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCC--ccccc--------cchhhh
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGF--GRVGT--------HWWAFQ 136 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~--GrtG~--------~~~~~~ 136 (224)
+++|++.++. . ++.+|++++.....|.+.+.++..+.+++. +++++ +.++. ..+.++
T Consensus 160 ~~~l~~~i~~---~--~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (397)
T 3f9t_A 160 EKFVKDAVED---Y--DVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFS 234 (397)
T ss_dssp HHHHHHHHHH---S--CCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCCSGG
T ss_pred HHHHHHHHhh---c--CCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhccccccccccccccccc
Confidence 4566666652 1 567888888888889888766666666666 66653 23331 023334
Q ss_pred hcCCCCCCchhcccccccCCcccccceecHHH-HHhhhcC-Cc-c-------cccCCCCcHHHHHHHHHHHHHHhhhhHH
Q psy6205 137 LQGDDIIPDIVTVGKPMGNGHPVAAVITTKEI-AKSFQET-GV-E-------YFNTYGGNPVSCAVANAVMEVLETENLR 206 (224)
Q Consensus 137 ~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i-~~~~~~~-~~-~-------~~~T~~~~p~~~aaa~a~l~~~~~~~l~ 206 (224)
. + +.+.+.+++|.+++|.++|+++++++. .+.+... .. . .++++..++++++++++.+....-+++.
T Consensus 235 ~-~--~~~~~~s~~K~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 311 (397)
T 3f9t_A 235 L-G--VDSITIDPHKMGHCPIPSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIV 311 (397)
T ss_dssp G-T--CSEEECCTTTTTCCCSSCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c-c--CCeEEEccccccCCCCCceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHHHhHHHHHHHH
Confidence 4 5 666677889999888899999887653 3333211 00 0 0223445677777777777655456788
Q ss_pred HHHHHHHHHHHHhhhhc
Q psy6205 207 EHALDVGNQLHTPKKEN 223 (224)
Q Consensus 207 ~~~~~~g~~l~~~l~~l 223 (224)
++++++.+++.+.|+++
T Consensus 312 ~~~~~~~~~l~~~L~~~ 328 (397)
T 3f9t_A 312 NECMENTLYLYKKLKEN 328 (397)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHC
Confidence 88999999999999875
No 109
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=98.44 E-value=1.2e-06 Score=75.30 Aligned_cols=132 Identities=15% Similarity=0.182 Sum_probs=84.2
Q ss_pred HHHHHHHHHHHccCCCCceEEEEcc-ccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCC-CC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAES-LQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDI-IP 144 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Ep-v~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v-~p 144 (224)
+++|++.+.. .++++|++.| .. |...+.++..+.+++. +++ +|+++. . ....+ + .+
T Consensus 152 ~~~l~~~i~~-----~~~~~v~~~~~~~---~~~~~l~~i~~l~~~~~~~li~Dea~~-~g~~~~-~--~~~~~--~~~~ 217 (405)
T 2vi8_A 152 YDDVREKARL-----HRPKLIVAAAAAY---PRIIDFAKFREIADEVGAYLMVDMAHI-AGLVAA-G--LHPNP--VPYA 217 (405)
T ss_dssp HHHHHHHHHH-----HCCSEEEECCSSC---CSCCCHHHHHHHHHHHTCEEEEECTTT-HHHHHT-T--SSCCS--TTTC
T ss_pred HHHHHHHHHh-----cCCeEEEEeCCCC---CccCCHHHHHHHHHHcCCEEEEEcccc-cccccc-C--cCCCc--cccC
Confidence 4556665542 1356777754 33 3332333444444444 555 555543 1 11122 2 58
Q ss_pred chh--cccccccCCcccccceecHHHHHhhhcCCcccccCCCC-cHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHH
Q psy6205 145 DIV--TVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGG-NPVSCAVANAVMEVLET---ENLREHALDVGNQLHT 218 (224)
Q Consensus 145 Di~--~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~-~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~~ 218 (224)
|++ +++|.++|+.. |++++++++++.+... ...+++++ ++..++++.++|+.+++ +++.++++++.++|.+
T Consensus 218 di~~~s~sK~~~g~~g-G~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~ 294 (405)
T 2vi8_A 218 HFVTTTTHKTLRGPRG-GMILCQEQFAKQIDKA--IFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLAS 294 (405)
T ss_dssp SEEEEESSSTTCCCSC-EEEEECHHHHHHHHHH--HTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEeccccCCCCCC-eEEEEcHHHHHHHHhh--hcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 887 78999986544 8899999998877542 11234444 78888888899998764 6788999999999999
Q ss_pred hhhhc
Q psy6205 219 PKKEN 223 (224)
Q Consensus 219 ~l~~l 223 (224)
.|+++
T Consensus 295 ~L~~~ 299 (405)
T 2vi8_A 295 ALQNE 299 (405)
T ss_dssp HHHHT
T ss_pred HHHhC
Confidence 99865
No 110
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=98.44 E-value=6.8e-07 Score=76.06 Aligned_cols=124 Identities=11% Similarity=0.079 Sum_probs=90.3
Q ss_pred eEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhccccccc-CCcccccce
Q psy6205 93 CAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMG-NGHPVAAVI 163 (224)
Q Consensus 93 aavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~-~G~p~~av~ 163 (224)
.+++++..+...|.+.+.++..+.+++. ++++|...+. ....+..+ ....+.+++|.+| .|+++|+++
T Consensus 151 ~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~-~~~~~~~~--~~i~~~s~sK~~g~~G~r~G~~~ 227 (360)
T 3hdo_A 151 KVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAESNA-LELVRRHE--NVVVTRTLSKSYSLAGMRIGLAI 227 (360)
T ss_dssp SEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSCCC-THHHHHCS--SEEEEEESTTTTSCTTSCCEEEE
T ss_pred CEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCcch-hHHhccCC--CEEEEecchHhhcCCccceeeEe
Confidence 3666766677789888887766666554 7777744332 22334444 5556668999998 689999999
Q ss_pred ecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 164 TTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 164 ~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++++++.+... ..+|+.|+++++++.++|+..+ -++..++++++.++|.+.|+++
T Consensus 228 ~~~~~~~~~~~~----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 284 (360)
T 3hdo_A 228 ARPEVIAALDKI----RDHYNLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSI 284 (360)
T ss_dssp CCHHHHHHHHHH----SCSCCSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eCHHHHHHHHHh----CCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999999988643 3568899999999999998632 1456777788888888888764
No 111
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=98.42 E-value=6.4e-07 Score=77.49 Aligned_cols=126 Identities=12% Similarity=0.075 Sum_probs=90.0
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhcc--cccccCCccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTV--GKPMGNGHPV 159 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~--~K~l~~G~p~ 159 (224)
+++.+|++++++...|.+.+.++..+.+++. +++ +|... +..+.++ +|++++ +|.+++|..+
T Consensus 164 ~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~-~g~~~---~~~~~~~----~d~~~~s~~K~l~~g~~~ 235 (416)
T 1qz9_A 164 QDTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHS-AGAVP---VDLHQAG----ADYAIGCTYKYLNGGPGS 235 (416)
T ss_dssp TTEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTT-TTTSC---CCHHHHT----CSEEEECSSSTTCCCTTC
T ss_pred CCceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEcccc-ccCcC---CChhhcC----CCEEEecCcccCCCCCCC
Confidence 3678999999999999888866666666665 543 44332 1233333 788876 5999888777
Q ss_pred -ccceecHHHHHhhhcCCcc---------------------cccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHH
Q psy6205 160 -AAVITTKEIAKSFQETGVE---------------------YFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGN 214 (224)
Q Consensus 160 -~av~~~~~i~~~~~~~~~~---------------------~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~ 214 (224)
|++++++++.+.+...... ....++.|+.+++++.++|+.+.+ +++.++++++.+
T Consensus 236 ~g~l~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~ 315 (416)
T 1qz9_A 236 QAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTD 315 (416)
T ss_dssp CCEEEECTTTTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHH
T ss_pred eEEEEECHHHHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 9999999987766432000 012335688899999999999864 467888999999
Q ss_pred HHHHhhhhc
Q psy6205 215 QLHTPKKEN 223 (224)
Q Consensus 215 ~l~~~l~~l 223 (224)
+|.+.|+++
T Consensus 316 ~l~~~L~~~ 324 (416)
T 1qz9_A 316 LFIELVEQR 324 (416)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999998764
No 112
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=98.42 E-value=6e-07 Score=77.87 Aligned_cols=125 Identities=10% Similarity=0.016 Sum_probs=87.8
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhccc--ccccCCccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG--KPMGNGHPV 159 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~--K~l~~G~p~ 159 (224)
+++++|++++++...|.+.+.++..+.+++. +++ +|.. ...... ..+|+++++ |.+ |+.++
T Consensus 162 ~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~-~~~~-----~~~~~~--~~~di~~~s~sK~~-g~~g~ 232 (423)
T 3lvm_A 162 DDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQS-VGKL-----PIDLSQ--LKVDLMSFSGHKIY-GPKGI 232 (423)
T ss_dssp TTEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTT-TTTS-----CCCTTT--SCCSEEEEESTTTT-SCSSC
T ss_pred CCcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhh-cCCC-----CcChhh--cCCCEEEechHHhc-CCCCe
Confidence 3678999999999999988866655555555 433 2211 122222 458999877 954 44568
Q ss_pred ccceecHHHHHhhhcCCc-----ccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 160 AAVITTKEIAKSFQETGV-----EYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 160 ~av~~~~~i~~~~~~~~~-----~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
|++++++++.+.+..... ....+.+.++.+++++.++++.+++ +++.++++++.++|.+.|+++
T Consensus 233 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 303 (423)
T 3lvm_A 233 GALYVRRKPRVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKDI 303 (423)
T ss_dssp EEEEECBTTBCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred EEEEEeccccCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999887666543210 0124566788899999999998866 688899999999999999865
No 113
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=98.42 E-value=9.3e-07 Score=75.55 Aligned_cols=126 Identities=13% Similarity=0.059 Sum_probs=90.1
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHH----HH--------HHhCCccccccchhhhhcCCCCCCchhc--ccccccC
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVY----KH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN 155 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~----~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~ 155 (224)
+++++|++++.+...|.+.+.++..+.++ +. +++ +|.+.. ... . ..+|+++ ++|.+.|
T Consensus 153 ~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~-~g~~~~---~~~--~--~~~d~~~~s~~K~~~~ 224 (390)
T 1elu_A 153 PKTRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQS-AGSLPL---DFS--R--LEVDYYAFTGHKWFAG 224 (390)
T ss_dssp TTEEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTT-BTTBCC---CTT--T--SCCSEEEEESSSTTCC
T ss_pred CCceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccc-cCCcCC---Chh--h--cCCCEEEccccccccC
Confidence 36889999999998998888666666666 44 433 443321 111 1 4589887 9998888
Q ss_pred CcccccceecHHHHHhhhcCCc--------------------ccccCCCCcHHHHHHHHHHHHHHhhh----hHHHHHHH
Q psy6205 156 GHPVAAVITTKEIAKSFQETGV--------------------EYFNTYGGNPVSCAVANAVMEVLETE----NLREHALD 211 (224)
Q Consensus 156 G~p~~av~~~~~i~~~~~~~~~--------------------~~~~T~~~~p~~~aaa~a~l~~~~~~----~l~~~~~~ 211 (224)
|..+|++++++++++.+..... ....+.+.|+++++++.++|+.++++ .+.++.++
T Consensus 225 ~~g~G~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~ 304 (390)
T 1elu_A 225 PAGVGGLYIHGDCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQ 304 (390)
T ss_dssp CTTCEEEEECTTTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CCceEEEEECHHhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 8889999999998887653210 01123456888899999999988654 37788889
Q ss_pred HHHHHHHhhhhc
Q psy6205 212 VGNQLHTPKKEN 223 (224)
Q Consensus 212 ~g~~l~~~l~~l 223 (224)
+.+++.+.|+++
T Consensus 305 ~~~~l~~~L~~~ 316 (390)
T 1elu_A 305 RSEFLWRGLNQL 316 (390)
T ss_dssp HHHHHHHHHHHS
T ss_pred HHHHHHHHHHhc
Confidence 999999998765
No 114
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=98.39 E-value=1.2e-06 Score=74.27 Aligned_cols=124 Identities=13% Similarity=0.003 Sum_probs=83.7
Q ss_pred ceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchh---ccccccc-C
Q psy6205 92 PCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIV---TVGKPMG-N 155 (224)
Q Consensus 92 iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~---~~~K~l~-~ 155 (224)
..+|+++..+...|.+. +.+.++++.++ ++++|.+.+. .......+ ..++++ +++|.++ .
T Consensus 145 ~~~v~i~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~--~~~~~i~~~s~sK~~~~~ 220 (361)
T 3ftb_A 145 VDSVIIGNPNNPNGGLI-NKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPS-SSFVGEIK--NYSCLFIIRAMTKFFAMP 220 (361)
T ss_dssp CSEEEEETTBTTTTBCC-CHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTT-SSSGGGTT--TCSSEEEEEESSSTTSCG
T ss_pred CCEEEEeCCCCCCCCCC-CHHHHHHHHHHhhhcCCEEEEECcchhhcCCcc-cchhHhcc--cCCCEEEEeeChhhcCCC
Confidence 44555544466677655 55557777765 7777765421 22233333 334444 6899998 7
Q ss_pred Ccccccce-ecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 156 GHPVAAVI-TTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 156 G~p~~av~-~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+++|+++ .++++++.+... ..+|+.|+++++++.++|+.-+ -++..++.+++.+++.+.|+++
T Consensus 221 G~r~g~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 286 (361)
T 3ftb_A 221 GIRFGYGITNNKEIAAKIKAK----QNPWNINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKI 286 (361)
T ss_dssp GGCCEEEEESCHHHHHHHHTT----SCTTCSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred CcceeEEEeCCHHHHHHHHhh----CCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 89999998 899999988643 3478999999999999987421 1345666777778888877764
No 115
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=98.38 E-value=9.9e-07 Score=76.57 Aligned_cols=119 Identities=13% Similarity=-0.014 Sum_probs=82.2
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhc--ccccccC-C-c
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN-G-H 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~-G-~ 157 (224)
+++++|++|+++...|.+.+-++..+.+++. +++. + +..+..+ ..+|+++ ++|.+++ | +
T Consensus 150 ~~~~~v~~~~~~nptG~~~~l~~i~~la~~~g~~li~D~~~~~----~---~~~~~~~--~~~di~~~S~sK~lg~~g~~ 220 (392)
T 3qhx_A 150 PTTRLIWVETPTNPLLSIADIAGIAQLGADSSAKVLVDNTFAS----P---ALQQPLS--LGADVVLHSTTKYIGGHSDV 220 (392)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTC----T---TTCCGGG--GTCSEEEEETTTTTTCSSCC
T ss_pred CCCeEEEEECCCCCCcEEecHHHHHHHHHHcCCEEEEECCCcc----c---ccCChHH--hCCcEEEEcCccccCCCCCc
Confidence 4789999999999999988766666666665 5431 1 2223333 5589988 9999997 4 6
Q ss_pred ccccceec-HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 158 PVAAVITT-KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 158 p~~av~~~-~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
..|+++++ +++.+.+... ....++..+|+.+++++..++.+.. ..++..++.+++.+.|+
T Consensus 221 ~~G~v~~~~~~~~~~l~~~--~~~~g~~~~~~~~~~~~~~l~~l~~--~~~~~~~~~~~l~~~L~ 281 (392)
T 3qhx_A 221 VGGALVTNDEELDQSFAFL--QNGAGAVPGPFDAYLTMRGLKTLVL--RMQRHSENAAAVAEFLA 281 (392)
T ss_dssp CCEEEEESCHHHHHHHHHH--HHHHCCCCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECcHHHHHHHHHH--HHhcCCCCCHHHHHHHHhhhhHHHH--HHHHHHHHHHHHHHHHh
Confidence 78888887 6888877543 3346788999999999998887643 23444444455555444
No 116
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=98.33 E-value=4.7e-06 Score=70.85 Aligned_cols=136 Identities=10% Similarity=0.077 Sum_probs=90.5
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
+++|++.++. +++.+|++++.+...|.+.+.++..+.+++. +++ +|... +.... ..+|+
T Consensus 116 ~~~l~~~i~~-----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~-~~~~~---~~~~~----~~~d~ 182 (384)
T 3zrp_A 116 PGEVEEEVRK-----SEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSS-VGAEE---VKAEE----WNVDV 182 (384)
T ss_dssp HHHHHHHHHH-----SCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTT-TTTSC---CCTTT----TTCSE
T ss_pred HHHHHHHHHh-----CCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECccc-ccCcc---ccccc----cCCCE
Confidence 4566666652 3578999999999999888744444444443 322 21110 11111 23788
Q ss_pred hccc--ccccCCcccccceecHHHHHhh-hcCC---------------cc----cccCC-CCcHHHHHHHHHHHHHHhhh
Q psy6205 147 VTVG--KPMGNGHPVAAVITTKEIAKSF-QETG---------------VE----YFNTY-GGNPVSCAVANAVMEVLETE 203 (224)
Q Consensus 147 ~~~~--K~l~~G~p~~av~~~~~i~~~~-~~~~---------------~~----~~~T~-~~~p~~~aaa~a~l~~~~~~ 203 (224)
++++ |.++++.++|++++++++++.+ .... .. ....+ +.|+.++++..++++.+++.
T Consensus 183 ~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~ 262 (384)
T 3zrp_A 183 YLTASQKALGSAAGLGLLLLSPKALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKE 262 (384)
T ss_dssp EEEETTSTTCCCSSEEEEEECHHHHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHH
T ss_pred EEecCcccccCCCceEEEEECHHHHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhc
Confidence 8765 9998877899999999998877 2100 00 12233 45777888888999988653
Q ss_pred ---hHHHHHHHHHHHHHHhhhhc
Q psy6205 204 ---NLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 204 ---~l~~~~~~~g~~l~~~l~~l 223 (224)
.+.++++++.+++.+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~l~~~L~~~ 285 (384)
T 3zrp_A 263 GIENRIKRHTMVASAIRAGLEAL 285 (384)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHC
Confidence 78888999999999999865
No 117
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=98.31 E-value=7.5e-06 Score=70.53 Aligned_cols=136 Identities=13% Similarity=0.020 Sum_probs=94.1
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
+++|++.++. +++.+|+++..+...|.+.+.++..+.+++. +++ +|.. .+....+ .+|+
T Consensus 125 ~~~l~~~i~~-----~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~-~~~~---~~~~~~~----~~d~ 191 (416)
T 3isl_A 125 PEDIIREIKK-----VKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVAT-IGGC---EVKVDEW----KIDA 191 (416)
T ss_dssp HHHHHHHHHH-----HCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTT-TTTS---CCCTTTT----TCSE
T ss_pred HHHHHHHHhh-----CCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCcc-ccCC---Ccchhhc----CCCE
Confidence 4556666642 2568999999999999988877777777766 322 2211 1112222 3677
Q ss_pred hcc--cccccCCcccccceecHHHHHhhhcCC------------------------------------cccccCCCCcHH
Q psy6205 147 VTV--GKPMGNGHPVAAVITTKEIAKSFQETG------------------------------------VEYFNTYGGNPV 188 (224)
Q Consensus 147 ~~~--~K~l~~G~p~~av~~~~~i~~~~~~~~------------------------------------~~~~~T~~~~p~ 188 (224)
+++ +|.+.++.++|++++++++++.+.... .....+.+.|+.
T Consensus 192 ~~~s~~K~l~g~~g~g~~~~~~~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (416)
T 3isl_A 192 AIGGTQKCLSVPSGMAPITYNERVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATT 271 (416)
T ss_dssp EECCSSSTTCCCSSEEEEEECHHHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHH
T ss_pred EEecCccccCCCCCeEEEEECHHHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHH
Confidence 764 599888788999999999988775310 011123456788
Q ss_pred HHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHhhhhc
Q psy6205 189 SCAVANAVMEVLETE---NLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 189 ~~aaa~a~l~~~~~~---~l~~~~~~~g~~l~~~l~~l 223 (224)
++++..++++.+++. ++.++.+++.+++.+.|+++
T Consensus 272 ~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 309 (416)
T 3isl_A 272 MLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAM 309 (416)
T ss_dssp HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 888888999988654 78888999999999999865
No 118
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=98.30 E-value=4.1e-06 Score=72.21 Aligned_cols=125 Identities=13% Similarity=0.062 Sum_probs=84.5
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhccc--ccccCCccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG--KPMGNGHPV 159 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~--K~l~~G~p~ 159 (224)
+++++|++++.+...|.+.+.++..+.+++. +++ +|... +....++ +|+++++ |.+| +..+
T Consensus 168 ~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~-~~~~~---~~~~~~~----~di~~~s~sK~~~-~~g~ 238 (420)
T 1t3i_A 168 EKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQS-APHYP---LDVQLID----CDWLVASGHKMCA-PTGI 238 (420)
T ss_dssp TTEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTT-TTTSC---CCHHHHT----CSEEEEEGGGTTS-CTTC
T ss_pred CCceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhc-cCCcc---CchhhcC----CCEEEEehhhhcC-CCce
Confidence 3678999999999899888855555555554 333 33221 1233333 7998876 9554 3348
Q ss_pred ccceecHHHHHhhhcCCcc------------------cccCCCCcHHHHHHHHH-HHHHHhh---hhHHHHHHHHHHHHH
Q psy6205 160 AAVITTKEIAKSFQETGVE------------------YFNTYGGNPVSCAVANA-VMEVLET---ENLREHALDVGNQLH 217 (224)
Q Consensus 160 ~av~~~~~i~~~~~~~~~~------------------~~~T~~~~p~~~aaa~a-~l~~~~~---~~l~~~~~~~g~~l~ 217 (224)
|++++++++++.+...... ..++++.++++++++++ +|+.+++ +++.++.+++.+++.
T Consensus 239 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~ 318 (420)
T 1t3i_A 239 GFLYGKEEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVELTHYLW 318 (420)
T ss_dssp EEEEECHHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred EEEEEchHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 9999999999887543110 11234566777766665 7888865 578888999999999
Q ss_pred Hhhhhc
Q psy6205 218 TPKKEN 223 (224)
Q Consensus 218 ~~l~~l 223 (224)
+.|+++
T Consensus 319 ~~L~~~ 324 (420)
T 1t3i_A 319 QGLGQI 324 (420)
T ss_dssp HHHHTC
T ss_pred HHHHhC
Confidence 999865
No 119
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=98.29 E-value=6.5e-06 Score=72.44 Aligned_cols=141 Identities=18% Similarity=0.171 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-HHhCCc------cc--cccchhh----hhcCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-VQVGFG------RV--GTHWWAF----QLQGDD 141 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-v~tG~G------rt--G~~~~~~----~~~g~~ 141 (224)
+++|++.+... ..+++++|++|++++..|-.+++.++++++.++ -+.|.- +. |. .|.. .+.+
T Consensus 169 ~~~le~~i~~~--~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~-~~~~~~~~~~~~-- 243 (467)
T 1ax4_A 169 IKKLKENIAQH--GADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENA-YFIKARDPKYKN-- 243 (467)
T ss_dssp HHHHHHHHHHH--CGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHH-HHHHHHCGGGTT--
T ss_pred HHHHHHHHHhc--CCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcc-hhccccccccCC--
Confidence 56777777632 124789999999998875577888999999998 111110 00 00 0111 2233
Q ss_pred CC-----------Cchh--cccccccCCccccccee-c-H-HHHHhhhcCCc--ccccCCCCcHHHHHHHHH-HHHHHhh
Q psy6205 142 II-----------PDIV--TVGKPMGNGHPVAAVIT-T-K-EIAKSFQETGV--EYFNTYGGNPVSCAVANA-VMEVLET 202 (224)
Q Consensus 142 v~-----------pDi~--~~~K~l~~G~p~~av~~-~-~-~i~~~~~~~~~--~~~~T~~~~p~~~aaa~a-~l~~~~~ 202 (224)
+. +|++ +++|.+ |.|+|++++ + + ++++.+..... ....++++++..+.++.+ +|+.+.+
T Consensus 244 ~~~~~~~~~~~~~~d~~~~s~sK~~--g~~~Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 321 (467)
T 1ax4_A 244 ATIKEVIFDMYKYADALTMSAKKDP--LLNIGGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE 321 (467)
T ss_dssp CCHHHHHHHHGGGCSEEEEETTSTT--CCSSCEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC
T ss_pred CchhhhhhhhccccceEEEeccccC--CCCcceEEEeCCHHHHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh
Confidence 31 5665 456654 567766554 5 5 78776643100 112467777766555444 6776655
Q ss_pred hhHHHHHHHHHHHHHHhhhh
Q psy6205 203 ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 203 ~~l~~~~~~~g~~l~~~l~~ 222 (224)
++..++..++.++|.+.|++
T Consensus 322 ~~~~~~~~~~~~~l~~~L~~ 341 (467)
T 1ax4_A 322 EEYLHYRIGQVKYLGDRLRE 341 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHh
Confidence 55666667888889888875
No 120
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=98.29 E-value=8.5e-06 Score=69.71 Aligned_cols=137 Identities=12% Similarity=0.058 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
+++|++.++. ..++.+|++++.+...|.+.+.++..+.+++. +++ +|... +..+.+ .+|+
T Consensus 122 ~~~l~~~l~~----~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~-~g~~~---~~~~~~----~~d~ 189 (392)
T 2z9v_A 122 PQAVADMLKA----HPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSS-FGGMK---THPEDC----KADI 189 (392)
T ss_dssp HHHHHHHHHH----CTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTT-BTTBS---CCGGGG----TCSE
T ss_pred HHHHHHHHhc----CCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccc-cCCcc---cccccc----cceE
Confidence 4566666642 23577899999998888888766555555555 433 33221 122223 3788
Q ss_pred hcc--cccccCCcccccceecHHHHHhhhcCC------------------cccccCCCCcHHHHHHHHHHHHHHhhh---
Q psy6205 147 VTV--GKPMGNGHPVAAVITTKEIAKSFQETG------------------VEYFNTYGGNPVSCAVANAVMEVLETE--- 203 (224)
Q Consensus 147 ~~~--~K~l~~G~p~~av~~~~~i~~~~~~~~------------------~~~~~T~~~~p~~~aaa~a~l~~~~~~--- 203 (224)
++. +|.++++..+|++++++++++.+.... .....+.+.|+.+++++.++|+.+++.
T Consensus 190 ~~~s~sK~~~~~~g~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~ 269 (392)
T 2z9v_A 190 YVTGPNKCLGAPPGLTMMGVSERAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPE 269 (392)
T ss_dssp EEECSSSTTCCCSCCEEEEECHHHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHH
T ss_pred EEecCcccccCCCceeEEEECHHHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHH
Confidence 764 699987666799999999988774210 001124456788888888999988653
Q ss_pred hHHHHHHHHHHHHHHhhhhc
Q psy6205 204 NLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 204 ~l~~~~~~~g~~l~~~l~~l 223 (224)
++.++.+++.+++.+.|+++
T Consensus 270 ~~~~~~~~~~~~l~~~L~~~ 289 (392)
T 2z9v_A 270 AVWARHALTAKAMRAGVTAM 289 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHc
Confidence 57888999999999998764
No 121
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=98.27 E-value=1.3e-06 Score=76.27 Aligned_cols=121 Identities=12% Similarity=-0.074 Sum_probs=76.4
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhcccccccCC-cccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGNG-HPVA 160 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~G-~p~~ 160 (224)
+++++|++|++++..|.+.+.++..+.+++. +++ ++. ++....+| ..+.+.+++|.++|+ .+++
T Consensus 151 ~~~~~v~~e~~~np~G~~~~l~~i~~la~~~g~~livDe~~~----~~~-~~~~~~~g--~div~~S~sK~l~g~g~~~g 223 (400)
T 3nmy_A 151 ADTKMVWIETPTNPMLKLVDIAAIAVIARKHGLLTVVDNTFA----SPM-LQRPLSLG--ADLVVHSATKYLNGHSDMVG 223 (400)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTT----HHH-HCCGGGGT--CSEEEEETTTTTTCSSSCCC
T ss_pred cCCCEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCc----ccc-cCChhhcC--CcEEEecCccccCCCCCcce
Confidence 4689999999999999988755555555554 322 221 22222344 334444599999975 6766
Q ss_pred c--c-eecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 161 A--V-ITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 161 a--v-~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
+ + ..++++.+.+... ....++..+|+.+++++..|+.+.. ..++..++.+++.+.|+
T Consensus 224 G~~vv~~~~~~~~~l~~~--~~~~g~~~~~~~a~~~l~~l~~l~~--r~~~~~~~a~~l~~~L~ 283 (400)
T 3nmy_A 224 GIAVVGDNAELAEQMAFL--QNSIGGVQGPFDSFLALRGLKTLPL--RMRAHCENALALAQWLE 283 (400)
T ss_dssp EEEEECSCHHHHHHHHHH--HHHHCCBCCHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHT
T ss_pred eEEEEeCCHHHHHHHHHH--HHhcCCCCCHHHHHHHHHhHhHHHH--HHHHHHHHHHHHHHHHH
Confidence 5 3 3477888877543 3345778899999999998887743 23344444444544444
No 122
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=98.25 E-value=3.7e-06 Score=72.09 Aligned_cols=125 Identities=11% Similarity=0.045 Sum_probs=84.2
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchh--cccccccCCccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGNGHPV 159 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~G~p~ 159 (224)
+++++|++++++...|.+.+.++..+.+++. +++ +|+.. +....+ .+|++ +++|.+|. ..+
T Consensus 163 ~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~-~g~~~---~~~~~~----~~d~~~~s~~K~~g~-~G~ 233 (406)
T 1kmj_A 163 EKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQA-VMHHP---VDVQAL----DCDFYVFSGHKLYGP-TGI 233 (406)
T ss_dssp TTEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTT-TTTSC---CCHHHH----TCSEEEEEGGGTTSC-TTC
T ss_pred cCCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhh-cCCCC---Cccccc----CCCEEEEEchhccCC-CCc
Confidence 3678999999999999888855555555554 543 33321 122223 38887 49999842 237
Q ss_pred ccceecHHHHHhhhcCCcc-------------------cccCCCCcHHHHHHHH-HHHHHHhh---hhHHHHHHHHHHHH
Q psy6205 160 AAVITTKEIAKSFQETGVE-------------------YFNTYGGNPVSCAVAN-AVMEVLET---ENLREHALDVGNQL 216 (224)
Q Consensus 160 ~av~~~~~i~~~~~~~~~~-------------------~~~T~~~~p~~~aaa~-a~l~~~~~---~~l~~~~~~~g~~l 216 (224)
|++++++++++.+...... ...+++.+++++++++ ++++.+++ +++.++++++.+++
T Consensus 234 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 313 (406)
T 1kmj_A 234 GILYVKEALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQNLMHYA 313 (406)
T ss_dssp EEEEECHHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred EEEEEeHHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Confidence 9999999999887532100 1123445666666666 88998865 37788899999999
Q ss_pred HHhhhhc
Q psy6205 217 HTPKKEN 223 (224)
Q Consensus 217 ~~~l~~l 223 (224)
.+.|+++
T Consensus 314 ~~~L~~~ 320 (406)
T 1kmj_A 314 LSQLESV 320 (406)
T ss_dssp HHHHTTS
T ss_pred HHHHhcC
Confidence 9999865
No 123
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=98.24 E-value=3.2e-06 Score=75.76 Aligned_cols=132 Identities=13% Similarity=0.076 Sum_probs=83.6
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCC-----ccccc--cchhhhhcCCCCCCchhccccccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGF-----GRVGT--HWWAFQLQGDDIIPDIVTVGKPMG 154 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~-----GrtG~--~~~~~~~~g~~v~pDi~~~~K~l~ 154 (224)
+++++|+++..+...|.+.+.++..+.+++. +++|| +++|. ..+.+...| +......++|.+.
T Consensus 238 ~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~g--~d~~~~s~~K~l~ 315 (514)
T 3mad_A 238 PNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEG--VTSVSADTHKYGY 315 (514)
T ss_dssp TTEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTSTT--CCEEEECTTTTTC
T ss_pred cCCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccCCC--CcEEEECchhccC
Confidence 3678999999998899988866666666665 55554 34442 023444555 5333345669988
Q ss_pred CCcccccceecHHHHHhhhcC-------Cc-----ccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh
Q psy6205 155 NGHPVAAVITTKEIAKSFQET-------GV-----EYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 155 ~G~p~~av~~~~~i~~~~~~~-------~~-----~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~ 222 (224)
+|+++|+++++++........ +. ..++++..+++++.+++..+....-+++.+++.++.++|.+.|++
T Consensus 316 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~ 395 (514)
T 3mad_A 316 GAKGTSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRA 395 (514)
T ss_dssp CCSSCEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCeEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 888999999988776543210 00 011233333455555555554433357888999999999999987
Q ss_pred c
Q psy6205 223 N 223 (224)
Q Consensus 223 l 223 (224)
+
T Consensus 396 ~ 396 (514)
T 3mad_A 396 I 396 (514)
T ss_dssp S
T ss_pred C
Confidence 5
No 124
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=98.22 E-value=2.5e-06 Score=73.93 Aligned_cols=128 Identities=10% Similarity=0.002 Sum_probs=82.7
Q ss_pred ceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccc----cchhhhhcCCCCCCc---hhccccc
Q psy6205 92 PCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGT----HWWAFQLQGDDIIPD---IVTVGKP 152 (224)
Q Consensus 92 iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~----~~~~~~~~g~~v~pD---i~~~~K~ 152 (224)
.+.++++| ....|.+ .++++++++.++ ++++|.+.|. .+.....+. ..++ +.+++|.
T Consensus 179 ~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~--~~~~~i~~~s~sK~ 254 (416)
T 1bw0_A 179 KLLIVTNP-SNPCGSN-FSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFE--TTVPRVILGGTAKN 254 (416)
T ss_dssp EEEEEESS-CTTTCCC-CCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSC--CSCCEEEEEESTTT
T ss_pred eEEEEeCC-CCCCCcc-cCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHcc--CCCcEEEEecchhh
Confidence 34556666 5556765 567788887776 7777765553 122222222 2222 2378999
Q ss_pred cc-CCcccccceecHH--HHHhhhcCCc-ccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHhhhhc
Q psy6205 153 MG-NGHPVAAVITTKE--IAKSFQETGV-EYFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 153 l~-~G~p~~av~~~~~--i~~~~~~~~~-~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~~~l~~l 223 (224)
++ .|+++|+++++++ +++.+..... ....|++.|+++++++.++|+.+.+ ++..++++++.+++.+.|+++
T Consensus 255 ~~~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 332 (416)
T 1bw0_A 255 LVVPGWRLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHIGEC 332 (416)
T ss_dssp TSCGGGCCEEEEEECTTCSCHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCCceEEEEEeeCchhhHHHHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 86 5899999998763 4443331100 1225788999999999999985432 356777888899999988764
No 125
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=98.21 E-value=1e-05 Score=71.00 Aligned_cols=141 Identities=19% Similarity=0.117 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHccCCCCceEEEEc-cccCCCCcccCCHHHHHHHHHH------------HHhC----------Ccccccc
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAE-SLQSCGGQIIPPANYLREVYKH------------VQVG----------FGRVGTH 131 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~E-pv~~~~G~~~~~~~~l~~~~~~------------v~tG----------~GrtG~~ 131 (224)
+++|++.+..- ....+++|+++ |..+..|. ..++++++++.++ +++. +.+.|.
T Consensus 160 ~~~l~~~i~~~--t~~~~~~v~l~~p~n~ptG~-~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~- 235 (456)
T 2ez2_A 160 LKKLQKLIDEK--GAENIAYICLAVTVNLAGGQ-PVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENK- 235 (456)
T ss_dssp HHHHHHHHHHH--CGGGEEEEEEESSBTTTTSB-CCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTS-
T ss_pred HHHHHHHHHhc--cccceeEEEEeccCCCCCCc-cCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCc-
Confidence 46677666531 22457899999 66667784 6778888888888 5442 445554
Q ss_pred chh-h-hhcCCCCCCchhccc-ccccCCcc-ccccee-cHHHHHhhhcCCc--ccccCCCC-cHHHHHH-HHHHHHHHhh
Q psy6205 132 WWA-F-QLQGDDIIPDIVTVG-KPMGNGHP-VAAVIT-TKEIAKSFQETGV--EYFNTYGG-NPVSCAV-ANAVMEVLET 202 (224)
Q Consensus 132 ~~~-~-~~~g~~v~pDi~~~~-K~l~~G~p-~~av~~-~~~i~~~~~~~~~--~~~~T~~~-~p~~~aa-a~a~l~~~~~ 202 (224)
.+. . +..+ ..+|++++| |.+++ .| .|++++ ++++++.+..... ...+|+.+ ++..+++ +.+.++.++
T Consensus 236 ~~~~~~~~~~--~~~d~~~~S~kk~~~-~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~- 311 (456)
T 2ez2_A 236 SIAEIVHEMF--SYADGCTMSGKKDCL-VNIGGFLCMNDDEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ- 311 (456)
T ss_dssp CHHHHHHHHH--TTCSEEEEETTTTTC-CSSCEEEEESCHHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC-
T ss_pred chhhhhhhhc--ccCCEEEEeCcccCC-CCceeEEEECCHHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH-
Confidence 221 1 1233 458998884 76754 34 566666 5888776643100 01123333 4445455 666666654
Q ss_pred hhHHHHHHHHHHHHHHhhhhc
Q psy6205 203 ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 203 ~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++.++.+++.+++.+.|+++
T Consensus 312 ~~~~~~~~~~~~~l~~~L~~~ 332 (456)
T 2ez2_A 312 YEYIEHRVKQVRYLGDKLKAA 332 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhcC
Confidence 567888889999999988764
No 126
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=98.19 E-value=5.1e-06 Score=71.83 Aligned_cols=117 Identities=13% Similarity=0.035 Sum_probs=76.5
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCch--hcccccccC-Ccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDI--VTVGKPMGN-GHP 158 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi--~~~~K~l~~-G~p 158 (224)
+++++|++|+.....|.+.+.++..+.+++. ++. .+..+. ...++ +|+ .+++|.+++ |.+
T Consensus 148 ~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~-~~~~~~----~~~~~----~di~~~s~sK~~~~~g~~ 218 (398)
T 2rfv_A 148 PETKVVYIETPANPTLSLVDIETVAGIAHQQGALLVVDNTFM-SPYCQQ----PLQLG----ADIVVHSVTKYINGHGDV 218 (398)
T ss_dssp TTEEEEEEESSBTTTTBCCCHHHHHHHHHHTTCEEEEECTTT-CTTTCC----GGGGT----CSEEEEETTTTTTCSSCC
T ss_pred CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCCc-ccccCC----chhhC----CcEEEEeCcccccCCCCc
Confidence 3678999999999999888755555555554 433 112221 11233 565 579999986 688
Q ss_pred c-ccceecHHHHH-hhhcCCccccc-CCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHH
Q psy6205 159 V-AAVITTKEIAK-SFQETGVEYFN-TYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLH 217 (224)
Q Consensus 159 ~-~av~~~~~i~~-~~~~~~~~~~~-T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~ 217 (224)
+ |++++++++++ .+... .... +++.+|++++++.++|+.+.+ +.+.++.+.+.++|+
T Consensus 219 ~~G~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~ 280 (398)
T 2rfv_A 219 IGGIIVGKQEFIDQARFVG--LKDITGGCMSPFNAWLTLRGVKTLGIRMERHCENALKIARFLE 280 (398)
T ss_dssp CCEEEEECHHHHHHHHHTH--HHHTTCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEECHHHHHHHHHHH--HHhCCCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 8 99999999887 44421 2334 678899999999999987632 234444545554444
No 127
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=98.18 E-value=2.7e-06 Score=73.70 Aligned_cols=120 Identities=12% Similarity=-0.014 Sum_probs=75.1
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhcccccccC-Cccc-
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGN-GHPV- 159 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~-G~p~- 159 (224)
+++++|++|++....|.+.+-++..+.+++. +++.+ ..+. ...++ ....+.+++|.+++ |.++
T Consensus 149 ~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~-~~~~----~~~~~--~d~~~~S~sK~~~~~~~~~~ 221 (398)
T 1gc0_A 149 PATRVIYFESPANPNMHMADIAGVAKIARKHGATVVVDNTYCTP-YLQR----PLELG--ADLVVHSATKYLSGHGDITA 221 (398)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHGGGTCEEEEECTTTHH-HHCC----GGGGT--CSEEEEETTTTTTCSSSCCC
T ss_pred CCCeEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCCccc-ccCC----chhhC--ceEEEECCccccCCCCCCeE
Confidence 3688999999999889888644444444443 43321 2221 11234 44444579999996 4787
Q ss_pred ccceecHHHHH-hhhcCCcccc-cCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHH
Q psy6205 160 AAVITTKEIAK-SFQETGVEYF-NTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHT 218 (224)
Q Consensus 160 ~av~~~~~i~~-~~~~~~~~~~-~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~ 218 (224)
|++++++++.+ .+... ... .+...||+++++++++|+.+.. +...++.+.+.++|.+
T Consensus 222 G~l~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~ 282 (398)
T 1gc0_A 222 GIVVGSQALVDRIRLQG--LKDMTGAVLSPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLAR 282 (398)
T ss_dssp EEEEECHHHHHHHHHTH--HHHHTCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEChHHHHHHHHHH--hhccCCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhc
Confidence 88888988765 34321 223 4667899999999999887632 3444455555555443
No 128
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=98.17 E-value=4.2e-06 Score=72.45 Aligned_cols=145 Identities=16% Similarity=0.148 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHccCCCCceEEEEc-cccCCCCcccCCHHHHHHHHH----------H--------HHhCCcccccc--ch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAE-SLQSCGGQIIPPANYLREVYK----------H--------VQVGFGRVGTH--WW 133 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~E-pv~~~~G~~~~~~~~l~~~~~----------~--------v~tG~GrtG~~--~~ 133 (224)
+++|++.++... .++..++++++ |.+...|.+.+.++ ++++.+ . +..+|+++|.. .+
T Consensus 163 ~~~l~~~l~~~~-~~~~~~~vi~~~p~~NPtG~~~~~~~-l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~ 240 (413)
T 3t18_A 163 IDVYKEAIDEGI-RDSDRIASLINSPGNNPTGYSLSDEE-WDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKF 240 (413)
T ss_dssp HHHHHHHHHHHH-HHCSEEEEEEECSSCTTTCCCCCHHH-HHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGG
T ss_pred HHHHHHHHHHHh-hcCCCEEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHH
Confidence 455665554211 11234467777 54777887776655 554444 3 77888877741 12
Q ss_pred hhhhcCCCCCCch--h---ccccccc-CCccccccee---cHHHHHhhhcCCcc-cc-cCCCCcHHHHHHHHHHHHHH--
Q psy6205 134 AFQLQGDDIIPDI--V---TVGKPMG-NGHPVAAVIT---TKEIAKSFQETGVE-YF-NTYGGNPVSCAVANAVMEVL-- 200 (224)
Q Consensus 134 ~~~~~g~~v~pDi--~---~~~K~l~-~G~p~~av~~---~~~i~~~~~~~~~~-~~-~T~~~~p~~~aaa~a~l~~~-- 200 (224)
.....+ +.+|+ + +++|.++ .|+++|++++ ++++++.+...... .. .++..++++.+++.+.|+.-
T Consensus 241 ~~~~~~--~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 318 (413)
T 3t18_A 241 FEKFSN--LPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENK 318 (413)
T ss_dssp GGGGTT--CCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHH
T ss_pred HHHHhh--cCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHH
Confidence 222233 66673 2 7999999 7899999999 99999888643101 11 23457888888888777542
Q ss_pred ----h-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 201 ----E-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 201 ----~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+ .+.+.++++++.+++.+.|+++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 346 (413)
T 3t18_A 319 KIYEQELVDLRNMLKSRADVFVTAAKEN 346 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 1 1356677788888888888764
No 129
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=98.16 E-value=5.3e-06 Score=72.59 Aligned_cols=123 Identities=17% Similarity=0.050 Sum_probs=79.5
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchh--cccccccC-Ccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN-GHP 158 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~-G~p 158 (224)
+++++|++|++++..|.+.+-++..+.+++. +++++|..+. .+ + ..+|++ +++|.+++ |.+
T Consensus 143 ~~~~~v~~~~~~n~~G~~~~l~~i~~~a~~~g~~livD~~~~~~g~~~~-~~-----~--~~~Di~~~s~~K~l~~~g~~ 214 (421)
T 2ctz_A 143 EKTRAWWVESIGNPALNIPDLEALAQAAREKGVALIVDNTFGMGGYLLR-PL-----A--WGAALVTHSLTKWVGGHGAV 214 (421)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGGGGTSCC-GG-----G--GTCSEEEEETTTTTTCSSCC
T ss_pred cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEECCcccccccCC-cc-----c--cCCeEEEECCcccccCCCCc
Confidence 3688999999999999988866666666665 7766776554 22 2 448998 78999997 578
Q ss_pred cccceecH---HH----HHhhhcC-----Cc-------------------ccccCCCCcHHHHHHHHHHHHHHhhhhHHH
Q psy6205 159 VAAVITTK---EI----AKSFQET-----GV-------------------EYFNTYGGNPVSCAVANAVMEVLETENLRE 207 (224)
Q Consensus 159 ~~av~~~~---~i----~~~~~~~-----~~-------------------~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~ 207 (224)
+|++++++ ++ .+.+... +. ........+|+.+++++..|+.+.+ ..+
T Consensus 215 ~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~--r~~ 292 (421)
T 2ctz_A 215 IAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLSL--RAE 292 (421)
T ss_dssp CCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHTTHHH--HHH
T ss_pred EEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcchHHH--HHH
Confidence 88887741 11 1222211 00 0112347799999999999888742 233
Q ss_pred HHHHHHHHHHHhhhh
Q psy6205 208 HALDVGNQLHTPKKE 222 (224)
Q Consensus 208 ~~~~~g~~l~~~l~~ 222 (224)
+..++.+++.+.|++
T Consensus 293 ~~~~~a~~l~~~L~~ 307 (421)
T 2ctz_A 293 RHVENTLHLAHWLLE 307 (421)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHhHHHHHHHHHh
Confidence 334555566665554
No 130
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=98.15 E-value=5.5e-06 Score=70.36 Aligned_cols=127 Identities=17% Similarity=0.086 Sum_probs=84.0
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH-----------HHhCCc---cccccchhh---hhcCCCCCCchhccccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH-----------VQVGFG---RVGTHWWAF---QLQGDDIIPDIVTVGKP 152 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----------v~tG~G---rtG~~~~~~---~~~g~~v~pDi~~~~K~ 152 (224)
+++.+|+++..+...|.+.+.+ .++++.++ ++.+|. ..+...... ..++ ....+.+++|.
T Consensus 152 ~~~~~v~~~~p~nptG~~~~~~-~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~s~sK~ 228 (365)
T 3get_A 152 DEIKLIFLCLPNNPLGECLDAS-EATEFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFD--NVLYLGTFSKL 228 (365)
T ss_dssp TTEEEEEEESSCTTTCCCCCHH-HHHHHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCT--TEEEEEESSST
T ss_pred CCCCEEEEcCCCCCCCCCcCHH-HHHHHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCC--CEEEEeecchH
Confidence 4677888876666678766544 45555553 555443 222101111 1222 33334479999
Q ss_pred cc-CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 153 MG-NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 153 l~-~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+| .|+++|++++++++.+.+... ..+|+.|+++++++.++|+..+ -++..++.+++.+++.+.|+++
T Consensus 229 ~~~~G~r~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~ 297 (365)
T 3get_A 229 YGLGGLRIGYGIANANIISAFYKL----RAPFNVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKH 297 (365)
T ss_dssp TSCTTTCCEEEEECHHHHHHHHHH----SCTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hcCcchheEEEEcCHHHHHHHHHh----cCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 98 789999999999999888642 3467799999999999988532 2356677777888888888764
No 131
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=98.14 E-value=1.4e-05 Score=68.69 Aligned_cols=124 Identities=14% Similarity=-0.016 Sum_probs=86.9
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhc--ccccccCCccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGNGHPV 159 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~G~p~ 159 (224)
+++.+|+++.++...|.+.+.++..+.+++. ++. +|... +..+.++ +|+++ ++|.+|.+ +
T Consensus 164 ~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~-~g~~~---~~~~~~~----~d~~~~s~~K~~g~~--~ 233 (406)
T 3cai_A 164 KSTRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAA-APYRL---LDIRETD----ADVVTVNAHAWGGPP--I 233 (406)
T ss_dssp TTEEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTT-TTTCC---CCHHHHC----CSEEEEEGGGGTSCS--C
T ss_pred CCceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccc-cCCCC---CCchhcC----CCEEEeehhhhcCCC--c
Confidence 3678999999999999998877777777776 433 22211 2333444 68775 57976543 8
Q ss_pred c-cceecHHHHHhhhcCCccc-------ccCCCCcHHHHHHHHHHHHHHhh-----------------hhHHHHHHHHHH
Q psy6205 160 A-AVITTKEIAKSFQETGVEY-------FNTYGGNPVSCAVANAVMEVLET-----------------ENLREHALDVGN 214 (224)
Q Consensus 160 ~-av~~~~~i~~~~~~~~~~~-------~~T~~~~p~~~aaa~a~l~~~~~-----------------~~l~~~~~~~g~ 214 (224)
| ++++++++.+.+......+ ..+.+.|+.+++++.++|+.+++ +++.++++++.+
T Consensus 234 G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (406)
T 3cai_A 234 GAMVFRDPSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVFD 313 (406)
T ss_dssp EEEEESCHHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEehHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHHH
Confidence 8 8999999988775431100 12345688888888899998864 467778889999
Q ss_pred HHHHhhhhc
Q psy6205 215 QLHTPKKEN 223 (224)
Q Consensus 215 ~l~~~l~~l 223 (224)
+|.+.|+++
T Consensus 314 ~l~~~L~~~ 322 (406)
T 3cai_A 314 YLMVSLRSL 322 (406)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHhcC
Confidence 999998764
No 132
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=98.13 E-value=1.5e-05 Score=69.09 Aligned_cols=115 Identities=12% Similarity=0.016 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCC-CCcccCCHHHHHHHHHH-------------HHhC--Ccc-----ccccch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSC-GGQIIPPANYLREVYKH-------------VQVG--FGR-----VGTHWW 133 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~-~G~~~~~~~~l~~~~~~-------------v~tG--~Gr-----tG~~~~ 133 (224)
+++|++.++ ...++.+|+++|...+ .|.+.+. +.++++.++ ++.. |.. ... ++
T Consensus 160 ~~~l~~~l~----~~~~~~~v~~~~~~~NPtG~~~~~-~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~-~~ 233 (423)
T 3ez1_A 160 VDAVERLAG----TDPSVKGILFVPTYSNPGGETISL-EKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVN-FV 233 (423)
T ss_dssp HHHHHHHHH----SCTTEEEEEECSSSCTTTCCCCCH-HHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCC-HH
T ss_pred HHHHHHHHh----hCCCceEEEECCCCCCCCCcCCCH-HHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcc-hh
Confidence 455665553 2356888989986555 7765554 446666553 4442 211 111 22
Q ss_pred hhh----hcCCCCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHH
Q psy6205 134 AFQ----LQGDDIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEV 199 (224)
Q Consensus 134 ~~~----~~g~~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~ 199 (224)
... ..+ ....+.+++|.+..|+.+|++++++++++.+... ....+++.++++++++.+.|+.
T Consensus 234 ~~~~~~~~~~--~~i~~~S~sK~~~~G~r~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~ 299 (423)
T 3ez1_A 234 VLARDAGYPD--RAFVFASTSKITFAGAGLGFVASSEDNIRWLSKY--LGAQSIGPNKVEQARHVKFLTE 299 (423)
T ss_dssp HHHHHHTCTT--SEEEEEESTTTSCSSSSCEEEEECHHHHHHHHHH--HHHSCSCCCHHHHHHHHHHHHH
T ss_pred hhhhccCCCC--eEEEEeCchhhccCCcceEEEEeCHHHHHHHHHH--HhhhccCCCHHHHHHHHHHHHh
Confidence 221 111 3334668999977789999999999999988643 3446888999999998888876
No 133
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=98.11 E-value=5.8e-06 Score=72.09 Aligned_cols=129 Identities=14% Similarity=0.065 Sum_probs=85.2
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcC--CCCCCchhccccccc-C
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQG--DDIIPDIVTVGKPMG-N 155 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g--~~v~pDi~~~~K~l~-~ 155 (224)
++.+|++...+...|.+. +.+.++++.++ ++++|...+. ......+. .+....+.+++|.+| .
T Consensus 198 ~~~~v~l~~p~NPtG~~~-~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~g~~ 275 (432)
T 3ei9_A 198 RTDIIFFCSPNNPTGAAA-TREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN-PRSIFEIPGAEEVAMETASFSNYAGFT 275 (432)
T ss_dssp CCSEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSC-CSSGGGSTTGGGTEEEEEESHHHHCTT
T ss_pred CCCEEEEeCCCCCCCCCC-CHHHHHHHHHHHHHcCcEEEEccchHhhccCCC-CCChhhcCCCCCeEEEEecchhccCCc
Confidence 566777765566677654 55567777665 6676644443 22322221 012233557999998 7
Q ss_pred CcccccceecHHH--------HHhhhcCCcccccCCCCcHHHHHHHHHHHHHH--h-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 156 GHPVAAVITTKEI--------AKSFQETGVEYFNTYGGNPVSCAVANAVMEVL--E-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 156 G~p~~av~~~~~i--------~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~--~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|+++|++++++++ .+.+... ....+++.++++.+++.++|+.. + -+.+.++++++.++|.+.|+++
T Consensus 276 G~r~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 352 (432)
T 3ei9_A 276 GVRLGWTVIPKKLLYSDGFPVAKDFNRI--ICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSL 352 (432)
T ss_dssp TTCCEEEECCTTCBCTTSCBHHHHHHHH--HHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccceEEEEEChHHhhcchHHHHHHHHHH--hccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 8999999999887 5555432 22346678999999999988532 1 2467778888889999888765
No 134
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=98.11 E-value=6.9e-06 Score=71.04 Aligned_cols=118 Identities=12% Similarity=-0.009 Sum_probs=79.8
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchh--cccccccCC-cc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGNG-HP 158 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~G-~p 158 (224)
+++++|++|+.....|.+.+.++..+.+++. +++++ ..+ ...+ ..+|++ +++|.++++ .+
T Consensus 143 ~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~livD~~~~~~-~~~------~~~~--~~~di~~~S~sK~~~~~~~~ 213 (389)
T 3acz_A 143 PNTKMVYLESPANPTCKVSDIKGIAVVCHERGARLVVDATFTSP-CFL------KPLE--LGADIALHSVSKYINGHGDV 213 (389)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTCT-TTC------CGGG--TTCSEEEEETTTTTTCSSCC
T ss_pred CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCccc-ccc------Cccc--cCCeEEEECChhhccCCCCc
Confidence 3678999999999999888766666666665 44432 111 1222 458988 689999874 78
Q ss_pred c-ccceecH-HHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHH
Q psy6205 159 V-AAVITTK-EIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHT 218 (224)
Q Consensus 159 ~-~av~~~~-~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~ 218 (224)
+ |++++++ ++++.+... ....+...+|..++++++.|+.+.. +...++.+.+.++|.+
T Consensus 214 ~~G~v~~~~~~~~~~l~~~--~~~~g~~~~~~~~~~~~~~l~~l~~r~~~~~~~~~~l~~~l~~ 275 (389)
T 3acz_A 214 IGGVSSAKTAEDIATIKFY--RKDAGSLMAPMDAFLCARGMKTLPIRMQIHMENGLKVAKFLEQ 275 (389)
T ss_dssp CCEEEEESSHHHHHHHHHH--HHHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEECcHHHHHHHHHH--HHhcCCCCCHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHc
Confidence 7 9999998 888877543 1113445789999999998887632 3445555555555544
No 135
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=98.10 E-value=1.2e-05 Score=67.57 Aligned_cols=123 Identities=12% Similarity=0.185 Sum_probs=84.7
Q ss_pred CceEEE-EccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchh-hhhcCCCCCCchhccccccc-CCccc
Q psy6205 91 RPCAFF-AESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWA-FQLQGDDIIPDIVTVGKPMG-NGHPV 159 (224)
Q Consensus 91 ~iaavi-~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~-~~~~g~~v~pDi~~~~K~l~-~G~p~ 159 (224)
++.+|+ ..| +...|.+. +.+.++++.+. ++++|+. +. ... .+.++ ...++.+++|.+| .|+++
T Consensus 138 ~~~~v~l~~p-~nptG~~~-~~~~l~~l~~~~~~li~De~~~~~~~-~~-~~~~~~~~~--~~i~~~s~sK~~g~~G~r~ 211 (335)
T 1uu1_A 138 EGDVVFIPNP-NNPTGHVF-EREEIERILKTGAFVALDEAYYEFHG-ES-YVDFLKKYE--NLAVIRTFSKAFSLAAQRV 211 (335)
T ss_dssp TTEEEEEESS-CTTTCCCC-CHHHHHHHHHTTCEEEEECTTHHHHC-CC-CGGGGGTCS--SEEEEEESTTTTTCGGGCC
T ss_pred CCCEEEEeCC-CCCCCCCC-CHHHHHHHHHhCCEEEEECcchhhcc-hh-HHHHhhhCC--CEEEEecchhhcCCcccCe
Confidence 456666 566 55567654 66677766664 5555532 12 122 12222 3345568999998 78999
Q ss_pred ccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 160 AAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 160 ~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|++++++++++.+... ..+|+.|+++++++.++|+..+ -+++.++++++.+++.+.|+++
T Consensus 212 G~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 272 (335)
T 1uu1_A 212 GYVVASEKFIDAYNRV----RLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM 272 (335)
T ss_dssp EEEEECHHHHHHHHHH----SCTTCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCHHHHHHHHHh----cCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999887642 2467899999999999998742 3457778888888888888764
No 136
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=98.10 E-value=8.4e-06 Score=70.51 Aligned_cols=141 Identities=11% Similarity=0.106 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCcccc---ccchhhhhcC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVG---THWWAFQLQG 139 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG---~~~~~~~~~g 139 (224)
+++|++.++. ++.....+++...+...|. ..+.+.++++.++ ++.+|+..| . ......+.
T Consensus 163 ~~~l~~~l~~---~~~~~~~~~~~~p~nPtG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~ 237 (412)
T 1yaa_A 163 LNGFLNAIQK---APEGSIFVLHSCAHNPTGL-DPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKD-AYAVRLGV 237 (412)
T ss_dssp HHHHHHHHHH---SCTTCEEEEECSSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHH-THHHHHHH
T ss_pred HHHHHHHHHh---CCCCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccch-hHHHHHHH
Confidence 4556665542 2222333333444444665 4556667666665 777775544 2 12232211
Q ss_pred CCCCC----c--hhcccccccC-Ccccccce--e-----cHH----HHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh
Q psy6205 140 DDIIP----D--IVTVGKPMGN-GHPVAAVI--T-----TKE----IAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE 201 (224)
Q Consensus 140 ~~v~p----D--i~~~~K~l~~-G~p~~av~--~-----~~~----i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~ 201 (224)
...+ + +.+++|.+|. |+++|+++ + +++ +.+.+... ....+...++++++++.++|+...
T Consensus 238 -~~~~~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~a~~~~l~~~~ 314 (412)
T 1yaa_A 238 -EKLSTVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKI--IRSEVSNPPAYGAKIVAKLLETPE 314 (412)
T ss_dssp -HHTTTTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHH--HHTTTSSCCHHHHHHHHHHHHSHH
T ss_pred -hcCCCCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHH--HhhccCCCChHHHHHHHHHhCCHH
Confidence 0224 2 3378999997 89999998 7 666 77766531 112334458899999998887652
Q ss_pred --------hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 202 --------TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 202 --------~~~l~~~~~~~g~~l~~~l~~l 223 (224)
-+++.++++++.+++.+.|+++
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (412)
T 1yaa_A 315 LTEQWHKDMVTMSSRITKMRHALRDHLVKL 344 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 2456777888888898888764
No 137
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=98.09 E-value=4.5e-05 Score=65.16 Aligned_cols=136 Identities=12% Similarity=0.085 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
+++|++.++. .++.+|+++......|.+.+.++..+.+++. ++ ++|... +.... ..+|+
T Consensus 133 ~~~l~~~i~~-----~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~-~~~~~~---~~~~~----~~~d~ 199 (393)
T 2huf_A 133 LDEIRDALLI-----HKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVA-SLGGAP---MFMDR----WEIDA 199 (393)
T ss_dssp HHHHHHHHHH-----HCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTT-TBTTBC---CCTTT----TTCSE
T ss_pred HHHHHHHHhc-----cCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEccc-ccCCCC---cchhh----cCccE
Confidence 4556665542 1567889998888889988877777777776 43 344321 12222 23788
Q ss_pred hcc--cccccCCcccccceecHHHHHhhhcCC---ccc-----------------ccC-CCCcHHHHHHHHHHHHHHhh-
Q psy6205 147 VTV--GKPMGNGHPVAAVITTKEIAKSFQETG---VEY-----------------FNT-YGGNPVSCAVANAVMEVLET- 202 (224)
Q Consensus 147 ~~~--~K~l~~G~p~~av~~~~~i~~~~~~~~---~~~-----------------~~T-~~~~p~~~aaa~a~l~~~~~- 202 (224)
+++ +|.++|..++|++++++++++.+.... ..+ .++ .+.++.+.+++.++|+.+.+
T Consensus 200 ~~~s~sK~l~g~~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 279 (393)
T 2huf_A 200 MYTGSQKVLGAPPGITPVSFSHRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEE 279 (393)
T ss_dssp EECCSSSTTCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEECCCcccccCCCeEEEEECHHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHh
Confidence 865 599887666699999999998875420 010 112 23466677777789988854
Q ss_pred --hhHHHHHHHHHHHHHHhhhhc
Q psy6205 203 --ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 203 --~~l~~~~~~~g~~l~~~l~~l 223 (224)
+.+.++.+++.+++.+.|+++
T Consensus 280 ~~~~~~~~~~~~~~~l~~~L~~~ 302 (393)
T 2huf_A 280 GLPALIARHEDCAKRLYRGLQDA 302 (393)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHc
Confidence 357888899999999999764
No 138
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=98.08 E-value=1.3e-05 Score=69.50 Aligned_cols=145 Identities=12% Similarity=0.116 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHccCCCCceEEEEc-cccCCCCcccCCHHHHHHHHH----------H--------HHhCCcccccc--ch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAE-SLQSCGGQIIPPANYLREVYK----------H--------VQVGFGRVGTH--WW 133 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~E-pv~~~~G~~~~~~~~l~~~~~----------~--------v~tG~GrtG~~--~~ 133 (224)
+++|++.+.... .++..++++++ |.+...|.+.+.++ ++++.+ . +..+|++.|.. .+
T Consensus 164 ~~~l~~~l~~~~-~~~~~~~vi~~~p~~NPtG~~~~~~~-l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~ 241 (418)
T 3rq1_A 164 HEAFQNRVNELA-AKQTNVVVIFNTPGNNPTGYSIEDKD-WDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAF 241 (418)
T ss_dssp HHHHHHHHHHHH-HHCSEEEEEEECSSCTTTCCCCCHHH-HHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGG
T ss_pred HHHHHHHHHHhh-ccCCCEEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHH
Confidence 455665554311 11234467776 54777887766555 555544 2 67788776631 12
Q ss_pred hhhhcCCCCCCch---h--ccccccc-CCccccccee---cHHHHHhhhcCCcc-c-ccCCCCcHHHHHHHHHHHHH---
Q psy6205 134 AFQLQGDDIIPDI---V--TVGKPMG-NGHPVAAVIT---TKEIAKSFQETGVE-Y-FNTYGGNPVSCAVANAVMEV--- 199 (224)
Q Consensus 134 ~~~~~g~~v~pDi---~--~~~K~l~-~G~p~~av~~---~~~i~~~~~~~~~~-~-~~T~~~~p~~~aaa~a~l~~--- 199 (224)
.....+ +.+|+ + +++|.+| .|+++|++++ ++++++.+...... . ..++..++++.+++.+.|+.
T Consensus 242 ~~~~~~--~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 319 (418)
T 3rq1_A 242 FNKFSH--LPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAK 319 (418)
T ss_dssp GGGGTT--CCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHH
T ss_pred HHHHHh--cCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHH
Confidence 223333 66773 2 7999998 6899999999 99999887642101 1 12345788888888877743
Q ss_pred ---Hhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 200 ---LET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 200 ---~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
+.+ .++.++++++.+++.+.|+++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 348 (418)
T 3rq1_A 320 FKEYEAERNCYYQLIRDRADIFKQEAAQV 348 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 211 256677888888888888764
No 139
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=98.08 E-value=1.7e-05 Score=70.39 Aligned_cols=126 Identities=17% Similarity=0.065 Sum_probs=82.1
Q ss_pred CCceEEEEccccCCCCcc-cCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhcc--cccccC---
Q psy6205 90 KRPCAFFAESLQSCGGQI-IPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTV--GKPMGN--- 155 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~-~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~--~K~l~~--- 155 (224)
+++++|+++.. ...|.+ .+-++..+.+++. ++. .+.+|. .....++ +|++++ +|.+++
T Consensus 202 ~~t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~-~~~~g~--~~~~~~g----~di~~~s~~K~~~~p~g 273 (474)
T 1wyu_B 202 PHVAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANL-NAIMGW--ARPGDMG----FDVVHLNLHKTFTVPHG 273 (474)
T ss_dssp TTEEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGG-GGTTTT--CCHHHHT----CSEEECCTTTTTCCCCT
T ss_pred CCceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchh-hhhccC--CCcccCC----CcEEEEeCccccccCCC
Confidence 36789999873 457776 3444444444544 332 112221 1112233 798877 898862
Q ss_pred --CcccccceecHHHHHhhhcC-----Ccc------------cccCCCCcHHHHHHHHHHHHHHhhhhH---HHHHHHHH
Q psy6205 156 --GHPVAAVITTKEIAKSFQET-----GVE------------YFNTYGGNPVSCAVANAVMEVLETENL---REHALDVG 213 (224)
Q Consensus 156 --G~p~~av~~~~~i~~~~~~~-----~~~------------~~~T~~~~p~~~aaa~a~l~~~~~~~l---~~~~~~~g 213 (224)
|.++|++++++++++.+... +.. ...++.+|+++++++.+.|+.+..+++ .+++.++.
T Consensus 274 ~gG~~~G~~~~~~~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~ 353 (474)
T 1wyu_B 274 GGGPGSGPVGVKAHLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNA 353 (474)
T ss_dssp TSCCCCCCEEECGGGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEEcHHHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36899999999988776421 000 114556899999999999987755555 77888999
Q ss_pred HHHHHhhhhc
Q psy6205 214 NQLHTPKKEN 223 (224)
Q Consensus 214 ~~l~~~l~~l 223 (224)
++|.++|+++
T Consensus 354 ~~l~~~L~~~ 363 (474)
T 1wyu_B 354 RYLKELLKEK 363 (474)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHhhc
Confidence 9999999764
No 140
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=98.07 E-value=1.9e-05 Score=68.12 Aligned_cols=133 Identities=20% Similarity=0.087 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHccCCCCceEEEEc-cccCCCCcccCCHHHHHHHHHH--------H-HhCCccccccchhhhhcCCCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAE-SLQSCGGQIIPPANYLREVYKH--------V-QVGFGRVGTHWWAFQLQGDDIIP 144 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~E-pv~~~~G~~~~~~~~l~~~~~~--------v-~tG~GrtG~~~~~~~~~g~~v~p 144 (224)
+++|++.+.. .++++|+++ |..+ ...+.++..+.+++. + .+|+...|. .+.. .. .+
T Consensus 161 ~~~l~~~i~~-----~~~~~v~~~~~~~~---~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~-~~~~--~~---~~ 226 (425)
T 3ecd_A 161 YDQVEALAQQ-----HKPSLIIAGFSAYP---RKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGR-HANP--VE---HA 226 (425)
T ss_dssp HHHHHHHHHH-----HCCSEEEEECSCCC---SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTS-SCCG--GG---TC
T ss_pred HHHHHHHHhh-----cCCcEEEEccccCC---CcCCHHHHHHHHHHcCCEEEEECcChHhhhhccc-ccCc--hh---cC
Confidence 4667666652 246788888 5553 233333444444444 5 455544453 2211 11 16
Q ss_pred chhc--ccccccCCcccccceec-HHHHHhhhcCCcccccC-CCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHH
Q psy6205 145 DIVT--VGKPMGNGHPVAAVITT-KEIAKSFQETGVEYFNT-YGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHT 218 (224)
Q Consensus 145 Di~~--~~K~l~~G~p~~av~~~-~~i~~~~~~~~~~~~~T-~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~ 218 (224)
|+++ ++|+++| ...|+++++ +++.+.+... .....+ ...++..++++.+..+.+++ +++.++++++.++|.+
T Consensus 227 di~~~s~sK~l~g-~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~ 304 (425)
T 3ecd_A 227 HVVTSTTHKTLRG-PRGGFVLTNDEEIAKKINSA-VFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGD 304 (425)
T ss_dssp SEEEEESSGGGCC-CSCEEEEESCHHHHHHHHHH-HC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEecCCcccCC-CCcEEEEeCCHHHHHHHHhh-hCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 8775 5599954 346778887 5677766532 111112 22334455555555555544 3788999999999999
Q ss_pred hhhhc
Q psy6205 219 PKKEN 223 (224)
Q Consensus 219 ~l~~l 223 (224)
.|++.
T Consensus 305 ~L~~~ 309 (425)
T 3ecd_A 305 VLKAG 309 (425)
T ss_dssp HHHHT
T ss_pred HHHhC
Confidence 99865
No 141
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=98.07 E-value=1.3e-05 Score=69.80 Aligned_cols=121 Identities=9% Similarity=0.025 Sum_probs=80.5
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhc--ccccccC-Cccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVT--VGKPMGN-GHPV 159 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~~K~l~~-G~p~ 159 (224)
++.+|++|++....|.+.+-++..+.+++. ++++++... .... ..+|+++ ++|.+++ |.++
T Consensus 140 ~~~~v~~~~~~n~~G~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~------~~~~--~~~di~~~S~~K~~~~~~~~~ 211 (412)
T 2cb1_A 140 KTRAVFVETVANPALLVPDLEALATLAEEAGVALVVDNTFGAAGALC------RPLA--WGAHVVVESLTKWASGHGSVL 211 (412)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHTCEEEEECGGGTTTTSC------CGGG--GTCSEEEEETTTTTTCSSCCC
T ss_pred CCeEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCCccccccC------Cccc--cCCeEEEECCcccccCCCCcE
Confidence 678999999999999988766666666665 666542111 1222 4589887 9999986 5788
Q ss_pred ccceecH----------------------------HHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHH
Q psy6205 160 AAVITTK----------------------------EIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALD 211 (224)
Q Consensus 160 ~av~~~~----------------------------~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~ 211 (224)
|+++..+ ++.+.+.... .....+..+|..++.++..++.++ ...++..+
T Consensus 212 G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~r~~~-~~~~g~~~~~~~a~~~~~~l~~l~--~~~~~~~~ 288 (412)
T 2cb1_A 212 GGAVLSRETELWRNYPQFLQPDLKGQIPWEALRARCFPERVRTLG-LSLCGMALSPFNAYLLFQGLETVA--LRVARMSE 288 (412)
T ss_dssp CEEEEECCCSGGGGSGGGGCC-------HHHHGGGHHHHHHHHHH-TTTTCCCCCHHHHHHHHHHGGGHH--HHHHHHHH
T ss_pred EEEEEeccccccccccccccccccccchhhccchHHHHHHHHHHH-HHhcCCCCChHHhHHHHcCCchHH--HHHHHHHH
Confidence 8887654 3333333210 011234568999999888887773 34566677
Q ss_pred HHHHHHHhhhh
Q psy6205 212 VGNQLHTPKKE 222 (224)
Q Consensus 212 ~g~~l~~~l~~ 222 (224)
+.++|.+.|++
T Consensus 289 ~~~~l~~~L~~ 299 (412)
T 2cb1_A 289 TARFLAERLQG 299 (412)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHc
Confidence 88888888765
No 142
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=98.06 E-value=4.4e-05 Score=65.27 Aligned_cols=136 Identities=14% Similarity=0.105 Sum_probs=91.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
+++|++.++. +++.+|+++......|.+.+.++..+.+++. ++. +|... +..+. ..+|+
T Consensus 132 ~~~l~~~l~~-----~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~-~g~~~---~~~~~----~~~d~ 198 (396)
T 2ch1_A 132 LETLARAIEL-----HQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVAS-LCGVP---FYMDK----WEIDA 198 (396)
T ss_dssp HHHHHHHHHH-----HCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTT-BTTBC---CCTTT----TTCCE
T ss_pred HHHHHHHHHh-----CCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEcccc-ccCCc---cchhh----cCcCE
Confidence 4556665542 1467889988888889888887787777776 433 44321 12222 23798
Q ss_pred hccc--ccccCCcccccceecHHHHHhhhcCC----c-c----------------cccCCCCcHHHHHHHHHHHHHHhhh
Q psy6205 147 VTVG--KPMGNGHPVAAVITTKEIAKSFQETG----V-E----------------YFNTYGGNPVSCAVANAVMEVLETE 203 (224)
Q Consensus 147 ~~~~--K~l~~G~p~~av~~~~~i~~~~~~~~----~-~----------------~~~T~~~~p~~~aaa~a~l~~~~~~ 203 (224)
++.+ |.++++..+|++++++++++.+.... . . ....++.+..+++++.++|+.+.++
T Consensus 199 ~~~s~~K~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~ 278 (396)
T 2ch1_A 199 VYTGAQKVLGAPPGITPISISPKALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEE 278 (396)
T ss_dssp EECCCC-CCCCCSSCEEEEECHHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCccccCCCCeEEEEECHHHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHh
Confidence 8766 99988777789999999888764310 0 0 1123446777888899999987443
Q ss_pred ---hHHHHHHHHHHHHHHhhhhc
Q psy6205 204 ---NLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 204 ---~l~~~~~~~g~~l~~~l~~l 223 (224)
++.++.+++.+++.+.|+++
T Consensus 279 ~~~~~~~~~~~~~~~l~~~L~~~ 301 (396)
T 2ch1_A 279 GLENQIKRRIECAQILYEGLGKM 301 (396)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHC
Confidence 57788889999999998764
No 143
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=98.05 E-value=1.3e-05 Score=69.79 Aligned_cols=104 Identities=10% Similarity=-0.014 Sum_probs=71.2
Q ss_pred CceEEEEccccCC-CCcccCCHHHHHHHHHH-------------HHh--CCccccccchhh-------hhcCCCCCCchh
Q psy6205 91 RPCAFFAESLQSC-GGQIIPPANYLREVYKH-------------VQV--GFGRVGTHWWAF-------QLQGDDIIPDIV 147 (224)
Q Consensus 91 ~iaavi~Epv~~~-~G~~~~~~~~l~~~~~~-------------v~t--G~GrtG~~~~~~-------~~~g~~v~pDi~ 147 (224)
++.+|++.|...+ .|. ..+.+.++++.++ ++. +|+..|...... +..+ ...++.
T Consensus 178 ~~~~v~~~~~~~NPtG~-~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~ 254 (422)
T 3d6k_A 178 QVKGMWTVPVFGNPTGV-TFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPN--RFWFMS 254 (422)
T ss_dssp TEEEEEECCSSCTTTCC-CCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTT--CEEEEE
T ss_pred CCeEEEEcCCCCCCCCC-CCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCC--cEEEEc
Confidence 5778887886555 676 4577777777664 543 465554211111 1222 456677
Q ss_pred cccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHH
Q psy6205 148 TVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEV 199 (224)
Q Consensus 148 ~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~ 199 (224)
+++|.++.|+.+|++++++++++.+... ....+++.|+++.+++.++|+.
T Consensus 255 S~SK~~~~GlriG~~~~~~~l~~~l~~~--~~~~~~~~~~~~q~a~~~~l~~ 304 (422)
T 3d6k_A 255 STSKITHAGSGVSFFASSKENIEWYASH--ANVRGIGPNKLNQLAHAQFFGD 304 (422)
T ss_dssp ESTTTSCTTSSCEEEECCHHHHHHHHHH--HHHHCSCCCHHHHHHHHHHHCS
T ss_pred ChhhhcCcccceEEEEeCHHHHHHHHHH--HHhhcCCCCHHHHHHHHHHHhC
Confidence 8999966789999999999999888643 3346778899999988888753
No 144
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=98.04 E-value=1.8e-05 Score=68.39 Aligned_cols=141 Identities=11% Similarity=0.140 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccc--cchhhhh-cC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGT--HWWAFQL-QG 139 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~--~~~~~~~-~g 139 (224)
+++|++.++. .+++...+++..-+...|.+. +.+.++++.++ +..+|+..+. ..+.... .+
T Consensus 170 ~~~l~~~l~~---~~~~~~~i~~~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~ 245 (409)
T 4eu1_A 170 LAGMLECLDK---APEGSVILVHACAHNPTGVDP-THDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVD 245 (409)
T ss_dssp HHHHHHHHHH---SCTTCEEEEESSSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHT
T ss_pred HHHHHHHHHh---CCCCcEEEEECCCCCCCCCCC-CHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHh
Confidence 4556665542 333445555433344566544 55556666665 5566755441 0123332 23
Q ss_pred CCCCCchh---ccccccc-CCcccccc---eecHH----HHHhhhcCCcccccCCCCcHHHHHHHHHHHHHH-------h
Q psy6205 140 DDIIPDIV---TVGKPMG-NGHPVAAV---ITTKE----IAKSFQETGVEYFNTYGGNPVSCAVANAVMEVL-------E 201 (224)
Q Consensus 140 ~~v~pDi~---~~~K~l~-~G~p~~av---~~~~~----i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~-------~ 201 (224)
..++++ ++||.+| .|+.+|++ +.+++ +.+.+... ....+++.++++.+++.+.|+.. +
T Consensus 246 --~~~~~i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 321 (409)
T 4eu1_A 246 --MVPNLIVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALL--IRPMYNNPPLYGAWVVSSILKDPQLTALWKK 321 (409)
T ss_dssp --TSSCCEEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHH--HHHHHSSCCHHHHHHHHHHHHCHHHHHHHHH
T ss_pred --hCCcEEEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHH--HhhhcCCCChHHHHHHHHHhCCHHHHHHHHH
Confidence 557765 7999998 68999994 67777 55544321 12345666788888888888732 1
Q ss_pred -hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 202 -TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 202 -~~~l~~~~~~~g~~l~~~l~~l 223 (224)
-+...++++++.++|.+.|+++
T Consensus 322 ~~~~~~~~~~~~~~~l~~~L~~~ 344 (409)
T 4eu1_A 322 ELKQMSSRIAEVRKRLVSELKAC 344 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Confidence 2457778888888898888775
No 145
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=97.99 E-value=1.4e-05 Score=66.98 Aligned_cols=119 Identities=16% Similarity=0.036 Sum_probs=82.4
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHH-H--------HHhCCccccccchhhhhcCCCCCCchh--cccccccC-Cc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYK-H--------VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN-GH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~-~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~-G~ 157 (224)
+++.+|++++.+...|.+.+.++..+.+++ . +++ +|. ++....++ +|++ +++|.+++ |.
T Consensus 82 ~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~----~~~-~~~~~~~~----~d~~~~s~~K~~~~~~~ 152 (331)
T 1pff_A 82 PNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFA----SPI-LTNPLDLG----VDIVVHSATKYINGHTD 152 (331)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTT----HHH-HCCGGGGT----CSEEEEETTTTTSSSSS
T ss_pred CCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCc----ccc-cCChhhcC----CcEEEEECccccCCCCC
Confidence 467899999999999998886666666666 4 332 221 11111233 5655 69999986 46
Q ss_pred c-cccceecH-HHHHhhhcCCcccc-cCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHh
Q psy6205 158 P-VAAVITTK-EIAKSFQETGVEYF-NTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHTP 219 (224)
Q Consensus 158 p-~~av~~~~-~i~~~~~~~~~~~~-~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~~ 219 (224)
+ .|++++++ ++.+.+... ... .++..+|++++++.+.++.+. .+.+.++++.+.+++.++
T Consensus 153 r~~G~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~ 217 (331)
T 1pff_A 153 VVAGLVCSRADIIAKVKSQG--IKDITGAIISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEH 217 (331)
T ss_dssp CCCEEEEECHHHHHHHHHTC--CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ceEEEEEeCcHHHHHHHHHH--HHhhcCCCCCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHcC
Confidence 7 78999998 998888654 333 467889999988888888763 345667777777777653
No 146
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=97.99 E-value=1.8e-05 Score=66.76 Aligned_cols=125 Identities=10% Similarity=0.075 Sum_probs=84.5
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH----------HHhCCccccccchhhhhcC-CCCCCchhccccccc-CCcc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH----------VQVGFGRVGTHWWAFQLQG-DDIIPDIVTVGKPMG-NGHP 158 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----------v~tG~GrtG~~~~~~~~~g-~~v~pDi~~~~K~l~-~G~p 158 (224)
++.+|+++..+...|.+.+.++ ++++.+. ++..|+..+. . .....+ .+....+.+++|.++ .|+.
T Consensus 129 ~~~~v~i~~p~nptG~~~~~~~-l~~l~~~~~~~~li~Dea~~~~~~~~~-~-~~~~~~~~~~~i~~~S~sK~~~~~G~r 205 (350)
T 3fkd_A 129 NMDFCWLCNPNNPDGRLLQRTE-ILRLLNDHPDTTFVLDQSYVSFTTEEV-I-RPADIKGRKNLVMVYSFSHAYGIPGLR 205 (350)
T ss_dssp TCSEEEEESSCTTTCCCCCHHH-HHHHHHHCTTSEEEEECTTTTSCSSCC-C-CGGGGTTCSSEEEEEESHHHHSCGGGC
T ss_pred CCCEEEEeCCCCCcCCCCCHHH-HHHHHHhCCCCEEEEECchhhhccCcc-h-hhHHhhcCCCEEEEecCchhccCcchh
Confidence 5667777666777787776555 5555544 6677776664 2 122221 002233447999998 7899
Q ss_pred cccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 159 VAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 159 ~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|++++++++.+.+... ..+++.|+++++++.+.|+..+ .+.+.+.. ++.++|.+.|+++
T Consensus 206 ~G~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~l~~~L~~~ 267 (350)
T 3fkd_A 206 IGYIVANKDFMKRVAAF----STPWAVNALAIEAAKFILIHPAQFTLPIRKWQ-RNTVDFITALNRL 267 (350)
T ss_dssp CEEEECCHHHHHHHHTT----CCTTCSCHHHHHHHHHHHHCTTTTCCCHHHHH-HHHHHHHHHHHHS
T ss_pred eEeEEeCHHHHHHHHHh----CCCCCCCHHHHHHHHHHHhCHHHHHHHHHHHH-HHHHHHHHHHhcC
Confidence 99999999999988643 3577899999999999998654 23343333 7777787777654
No 147
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=97.98 E-value=1.3e-05 Score=70.27 Aligned_cols=119 Identities=13% Similarity=-0.010 Sum_probs=74.4
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhcccccccC-C-ccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGN-G-HPV 159 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~-G-~p~ 159 (224)
.++++|++|+.++..|.+.+.++..+.+++. +++ +|. ++....+| +...+.+++|.+++ | ++.
T Consensus 165 ~~t~~v~le~p~NptG~~~~l~~i~~la~~~g~~livDe~~~----~~~-~~~~~~~g--~div~~S~sK~l~~~G~~~~ 237 (414)
T 3ndn_A 165 VPTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFA----TPL-LQQGFPLG--VDVVVYSGTKHIDGQGRVLG 237 (414)
T ss_dssp SCCSEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTT----HHH-HCCCGGGT--CSEEEEETTTTTTCSSCCCC
T ss_pred CCCeEEEEECCCCCCCccccHHHHHHHHHHcCCEEEEECCCc----ccc-cCCchhcC--CCeEeccCCccccCCCCceE
Confidence 3678999999999999887755555555554 322 332 23333455 44444558899987 7 789
Q ss_pred ccceecHHHHH-hhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHH
Q psy6205 160 AAVITTKEIAK-SFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLH 217 (224)
Q Consensus 160 ~av~~~~~i~~-~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~ 217 (224)
|+++++++... .+......++. ..+|..+++++..++.+.. +...++.+.+.++|.
T Consensus 238 G~vv~~~~~~~~~l~~~~~~~g~--~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~ 296 (414)
T 3ndn_A 238 GAILGDREYIDGPVQKLMRHTGP--AMSAFNAWVLLKGLETLAIRVQHSNASAQRIAEFLN 296 (414)
T ss_dssp EEEEECHHHHTTHHHHHHHHHCC--CCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECHHHHHHHHHHHHHHcCC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999988776 44321112222 3478888888888777643 334444444444443
No 148
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=97.98 E-value=2.1e-05 Score=69.38 Aligned_cols=137 Identities=15% Similarity=0.150 Sum_probs=92.1
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
.++|++.++. +.+++++|+++.++...|.+.+.++..+.+++. ++. +|... .....++ .|+
T Consensus 201 ~~~l~~~i~~---~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~-~g~~~---~~~~~~~----~D~ 269 (465)
T 3e9k_A 201 IEDILEVIEK---EGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHA-VGNVE---LYLHDWG----VDF 269 (465)
T ss_dssp HHHHHHHHHH---HGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTT-TTTSC---CCHHHHT----CCE
T ss_pred HHHHHHHHHh---cCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhh-cCCcC---CchhhcC----CCE
Confidence 4566666653 335789999999999999998866666666655 221 11111 1122233 577
Q ss_pred hc--ccccccCC-cccccceecHHHHHhhhcCCcc---c--------c--c----------CCCCcHHHHHHHHHHHHHH
Q psy6205 147 VT--VGKPMGNG-HPVAAVITTKEIAKSFQETGVE---Y--------F--N----------TYGGNPVSCAVANAVMEVL 200 (224)
Q Consensus 147 ~~--~~K~l~~G-~p~~av~~~~~i~~~~~~~~~~---~--------~--~----------T~~~~p~~~aaa~a~l~~~ 200 (224)
++ +.|.+.+| ..+|++.+++++.+.+...... + . . .-+.|++++++..++++.+
T Consensus 270 ~~~s~~K~l~~gp~~~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~ 349 (465)
T 3e9k_A 270 ACWCSYKYLNAGAGGIAGAFIHEKHAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIF 349 (465)
T ss_dssp EEECSSSTTCCCTTCCCEEEECGGGTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHH
T ss_pred EEECcccccccCCCceEEEEEcHHHHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHH
Confidence 65 56999655 5789999999887765422000 0 0 0 1157889999999999998
Q ss_pred hh---hhHHHHHHHHHHHHHHhhhh
Q psy6205 201 ET---ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 201 ~~---~~l~~~~~~~g~~l~~~l~~ 222 (224)
++ +++.++.+++.+++.+.|++
T Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~L~~ 374 (465)
T 3e9k_A 350 KQATMKALRKKSVLLTGYLEYLIKH 374 (465)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHcCHHHHHHHHHHHHHHHHHHHHh
Confidence 65 57888999999999998876
No 149
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=97.97 E-value=0.00012 Score=62.04 Aligned_cols=136 Identities=7% Similarity=0.023 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH----------HHhCCccccccchhhhhcCCCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH----------VQVGFGRVGTHWWAFQLQGDDIIP 144 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----------v~tG~GrtG~~~~~~~~~g~~v~p 144 (224)
+++|++.++. +++.+|++++.+...|.+.+.++..+.+++. +++ +|.. .+..+. ..+
T Consensus 126 ~~~l~~~l~~-----~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~-~~~~---~~~~~~----~~~ 192 (385)
T 2bkw_A 126 LELITEKLSQ-----NSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCS-IGCE---EFEFDE----WGV 192 (385)
T ss_dssp HHHHHHHHHH-----SCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTT-TTTS---CCCTTT----TTC
T ss_pred HHHHHHHHhc-----CCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccc-cCCc---cccccc----cCc
Confidence 4566666642 3578899999999999888766666555553 332 2211 111222 236
Q ss_pred chhcc--cccccCCcccccceecHHHHH-hhhc------------------CCccc----cc-CCCCcHHHHHHHHHHHH
Q psy6205 145 DIVTV--GKPMGNGHPVAAVITTKEIAK-SFQE------------------TGVEY----FN-TYGGNPVSCAVANAVME 198 (224)
Q Consensus 145 Di~~~--~K~l~~G~p~~av~~~~~i~~-~~~~------------------~~~~~----~~-T~~~~p~~~aaa~a~l~ 198 (224)
|++++ +|.++|+..+|++++++++++ .+.. ....+ .. .++.|+.+++++.++|+
T Consensus 193 d~~~~s~~K~~~~~~G~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 272 (385)
T 2bkw_A 193 DFALTASQKAIGAPAGLSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALK 272 (385)
T ss_dssp SEEEEESSSTTCCCSCEEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHH
T ss_pred eEEEecCccccccCCcceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHH
Confidence 87765 699987666799999998877 4420 00001 01 24678889999999999
Q ss_pred HHhhh---hHHHHHHHHHHHHHHhh-hhc
Q psy6205 199 VLETE---NLREHALDVGNQLHTPK-KEN 223 (224)
Q Consensus 199 ~~~~~---~l~~~~~~~g~~l~~~l-~~l 223 (224)
.+++. .+.++.+++.++|.+.| +++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 301 (385)
T 2bkw_A 273 EILEEGLHKRWDLHREMSDWFKDSLVNGL 301 (385)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHHccHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88643 56788899999999998 764
No 150
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=97.97 E-value=2.8e-05 Score=65.95 Aligned_cols=123 Identities=18% Similarity=0.164 Sum_probs=82.7
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH----------HHhCCccccccchhhhhcCCCCCCchhccc--ccccC-Cc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH----------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG--KPMGN-GH 157 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~--K~l~~-G~ 157 (224)
++.+|++++.+...|.+.+.++..+.+++. +++ ||... +..+. ..+|+++++ |.+|- |
T Consensus 139 ~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~-~~~~~---~~~~~----~~~di~~~s~sK~~g~~G- 209 (384)
T 1eg5_A 139 DTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQT-IGKIP---FSLEK----LEVDYASFSAHKFHGPKG- 209 (384)
T ss_dssp TEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTT-TTTSC---CCCTT----TCCSEEEEEGGGGTSCTT-
T ss_pred CCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhh-cCCcc---cCchh----cCCCEEEecHHHhcCCCc-
Confidence 678999999888889888865555555553 332 43321 11111 348999877 97542 3
Q ss_pred ccccceecHHH--HHhhhcCCc-ccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITTKEI--AKSFQETGV-EYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~~~i--~~~~~~~~~-~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|++++++++ ...+..... ....+++.|+++++++.++|+.+++ +++.++++++.++|.+.|++.
T Consensus 210 -~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 279 (384)
T 1eg5_A 210 -VGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMNL 279 (384)
T ss_dssp -CEEEEECTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -eEEEEEcCCCccccccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCC
Confidence 7889999876 222211100 1135778899999999999998754 578888999999999998753
No 151
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=97.96 E-value=5e-05 Score=66.69 Aligned_cols=142 Identities=13% Similarity=0.047 Sum_probs=78.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhC----------Ccccccc-
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVG----------FGRVGTH- 131 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG----------~GrtG~~- 131 (224)
+++|++.+... ..+++++|++|++++..|-.+++.+++++++++ .+.. .+..|..
T Consensus 169 ~~~Le~~i~~~--~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~ 246 (467)
T 2oqx_A 169 LEGLERGIEEV--GPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTI 246 (467)
T ss_dssp HHHHHHHHHHH--CGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCH
T ss_pred HHHHHHHHHhc--CCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccH
Confidence 56777777631 124789999999988764567888999999998 1111 1222220
Q ss_pred -chhhhhcCCCCCCch--hcccccccCCcccccc-eecHH-HHHhh---hcCC--cccccCCCCcHHHHHHHHHH-HHHH
Q psy6205 132 -WWAFQLQGDDIIPDI--VTVGKPMGNGHPVAAV-ITTKE-IAKSF---QETG--VEYFNTYGGNPVSCAVANAV-MEVL 200 (224)
Q Consensus 132 -~~~~~~~g~~v~pDi--~~~~K~l~~G~p~~av-~~~~~-i~~~~---~~~~--~~~~~T~~~~p~~~aaa~a~-l~~~ 200 (224)
.++.+.+ -.+|+ .+++|.++ .|+|++ +++++ +++.+ .... .....++++.+..+.++++. ++..
T Consensus 247 ~~~~~~~~---~~~d~~~~s~sK~~g--~~~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~ 321 (467)
T 2oqx_A 247 EQITRETY---KYADMLAMSAKKDAM--VPMGGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDG 321 (467)
T ss_dssp HHHHHHHG---GGCSEEEEESSSTTC--CSSCEEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHT
T ss_pred HHHhhhhh---ccCCeEEEecccccC--CCCceEEEecChhHHHHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhh
Confidence 1221111 11454 56788874 455554 45656 44333 2110 01123455554444434432 3433
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 201 ETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 201 ~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
.+++..++.+++.++|.+.|+++
T Consensus 322 ~~~~~~~~~~~~~~~l~~~L~~~ 344 (467)
T 2oqx_A 322 MNLDWLAYRIAQVQYLVDGLEEI 344 (467)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHHHHHHHHHHC
Confidence 33345677788899999998764
No 152
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=97.95 E-value=2.2e-05 Score=67.66 Aligned_cols=132 Identities=14% Similarity=0.148 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHccCCCCceEEEE-ccccCCCCcccCCHHHHHHHHHH--------HH-hCCccccccchhhhhcCCCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFA-ESLQSCGGQIIPPANYLREVYKH--------VQ-VGFGRVGTHWWAFQLQGDDIIP 144 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~-Epv~~~~G~~~~~~~~l~~~~~~--------v~-tG~GrtG~~~~~~~~~g~~v~p 144 (224)
+++|++.++. +++++|++ +|..+ ...+.++..+.+++. ++ .|+.++|. +.. ... .+
T Consensus 158 ~~~l~~~i~~-----~~~~~v~~~~~~~~---~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~-~~~--~~~---~~ 223 (420)
T 3gbx_A 158 YDEMAKLAKE-----HKPKMIIGGFSAYS---GVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGV-YPN--PVP---HA 223 (420)
T ss_dssp HHHHHHHHHH-----HCCSEEEECCTTCC---SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTS-SCC--STT---TS
T ss_pred HHHHHHHHHh-----cCCeEEEEecCccC---CccCHHHHHHHHHHcCCEEEEECCcchhceeccc-CCc--ccc---cC
Confidence 4566666652 24677888 45543 344433333333333 53 45545553 211 121 38
Q ss_pred chhc--ccccccCCcccccceecH---HHHHhhhcCCcccccCCCCc--HHHHHHHHHHHHHHhh--hhHHHHHHHHHHH
Q psy6205 145 DIVT--VGKPMGNGHPVAAVITTK---EIAKSFQETGVEYFNTYGGN--PVSCAVANAVMEVLET--ENLREHALDVGNQ 215 (224)
Q Consensus 145 Di~~--~~K~l~~G~p~~av~~~~---~i~~~~~~~~~~~~~T~~~~--p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~ 215 (224)
|+++ ++|+++| ...|++++++ ++.+.+... .+.++++++ +..++++.+..+.+++ +++.++++++.++
T Consensus 224 di~~~s~sK~~~g-~~gg~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~ 300 (420)
T 3gbx_A 224 HVVTTTTHKTLAG-PRGGLILAKGGDEELYKKLNSA--VFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKA 300 (420)
T ss_dssp SEEEEESSGGGCS-CSCEEEEESSCCHHHHHHHHHH--HC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHH
T ss_pred CEEEeecccCCCC-CCceEEEEcCCcHHHHHHhhhh--cCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHH
Confidence 9988 6699973 2346688886 777776542 222333333 3333333333344333 4678889999999
Q ss_pred HHHhhhhc
Q psy6205 216 LHTPKKEN 223 (224)
Q Consensus 216 l~~~l~~l 223 (224)
|.+.|++.
T Consensus 301 l~~~L~~~ 308 (420)
T 3gbx_A 301 MVEVFLNR 308 (420)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 99998764
No 153
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=97.92 E-value=6.3e-06 Score=70.85 Aligned_cols=127 Identities=7% Similarity=-0.044 Sum_probs=81.4
Q ss_pred CceEEEEccccCCCCcccCCHHH---HHHHHH------H--------HHhCCccccccc-hhhhhcCCCCCCchhccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANY---LREVYK------H--------VQVGFGRVGTHW-WAFQLQGDDIIPDIVTVGKP 152 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~---l~~~~~------~--------v~tG~GrtG~~~-~~~~~~g~~v~pDi~~~~K~ 152 (224)
++.+|++...+...|.+.+..+. .+.+++ . ++++|.+.|... ...+.++ ....+.+++|.
T Consensus 172 ~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~i~~~s~sK~ 249 (398)
T 3ele_A 172 HTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYD--NTLVCYSYSKS 249 (398)
T ss_dssp TEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCS--SEEEEEESTTT
T ss_pred CCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcC--CeEEEEehhhc
Confidence 56778886667778877664432 234444 3 777776666311 1122333 44556689999
Q ss_pred cc-CCcccccceecHHHHH------hhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 153 MG-NGHPVAAVITTKEIAK------SFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 153 l~-~G~p~~av~~~~~i~~------~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+| .|+++|++++++++.+ .+... .....+++.++++.+++.+.|+ +....++++++.++|.+.|+++
T Consensus 250 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~~~~l~---~~~~~~~~~~~~~~l~~~L~~~ 323 (398)
T 3ele_A 250 LSLPGERIGYVLVPDEVYDKAELYAAVCGA-GRALGYVCAPSLFQKMIVKCQG---ATGDINAYKENRDLLYEGLTRI 323 (398)
T ss_dssp SSCTTTCCEEEECCTTSTTHHHHHHHHHHH-HHHTTCCCSCHHHHHHHTTCTT---CCCCHHHHHHHHHHHHHHHHHH
T ss_pred CCCccceeEEEEEcchhhhHHHHHHHHHHH-hhhccccCCCHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHc
Confidence 99 8899999999987543 22211 1122467778888877766554 4446788888888998888764
No 154
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=97.91 E-value=6.9e-05 Score=64.51 Aligned_cols=134 Identities=12% Similarity=0.068 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCC-CCc
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDI-IPD 145 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v-~pD 145 (224)
+++|++.+.. +++.+|++. ++..|.+.+.++..+.+++. +++ .|. .+...+.. .+ ..|
T Consensus 153 ~~~l~~~i~~-----~~~~~v~~~--~~~~G~~~~l~~i~~l~~~~~~~li~Dea~~----~g~-~~~~~~~~-~~~~~d 219 (417)
T 3n0l_A 153 YEKVREIAKK-----EKPKLIVCG--ASAYARVIDFAKFREIADEIGAYLFADIAHI----AGL-VVAGEHPS-PFPYAH 219 (417)
T ss_dssp HHHHHHHHHH-----HCCSEEEEC--CSSCCSCCCHHHHHHHHHHHTCEEEEECTTT----HHH-HHTTSSCC-CTTTCS
T ss_pred HHHHHHHHHh-----cCCeEEEEC--CcccCccCCHHHHHHHHHHcCCEEEEECccc----hhh-hhcccCCC-ccccce
Confidence 4566666652 245566643 33457776644444444444 321 111 11111111 01 248
Q ss_pred hhccc--ccccCCcccccceec-HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-h--hhHHHHHHHHHHHHHHh
Q psy6205 146 IVTVG--KPMGNGHPVAAVITT-KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-T--ENLREHALDVGNQLHTP 219 (224)
Q Consensus 146 i~~~~--K~l~~G~p~~av~~~-~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~--~~l~~~~~~~g~~l~~~ 219 (224)
+++++ |+++|+ ..|+++++ +++.+.+... ..+..+.+.++..+++..++++.+. + +++.++++++.++|.+.
T Consensus 220 i~~~s~sK~l~g~-~~G~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~ 297 (417)
T 3n0l_A 220 VVSSTTHKTLRGP-RGGIIMTNDEELAKKINSA-IFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANV 297 (417)
T ss_dssp EEEEESSTTTCSC-SCEEEEESCHHHHHHHHHH-HTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeeCccccCCC-CeeEEEECCHHHHHHHhhh-hCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Confidence 88877 999543 46888888 7888877542 1222344556777777777777743 3 36777888888999988
Q ss_pred hhhc
Q psy6205 220 KKEN 223 (224)
Q Consensus 220 l~~l 223 (224)
|++.
T Consensus 298 L~~~ 301 (417)
T 3n0l_A 298 LMDR 301 (417)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 8764
No 155
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=97.87 E-value=2.6e-05 Score=68.72 Aligned_cols=125 Identities=10% Similarity=-0.056 Sum_probs=73.5
Q ss_pred CCceEEEEcc----ccCCCCcccCCHHHHHHHHH--H--------HHhCCccccccchhhhhcCCCCCCchh--cccccc
Q psy6205 90 KRPCAFFAES----LQSCGGQIIPPANYLREVYK--H--------VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPM 153 (224)
Q Consensus 90 ~~iaavi~Ep----v~~~~G~~~~~~~~l~~~~~--~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l 153 (224)
+++.+|++|+ ..+..|...+-++..+.+++ . ++..+..... . ..+| .|++ +++|.+
T Consensus 164 ~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~-~---~~~g----~Di~~~S~sK~l 235 (431)
T 3ht4_A 164 SNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQE-P---CHVG----ADLMAGSLIKNP 235 (431)
T ss_dssp TTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCC-G---GGTT----CSEEEEETTSGG
T ss_pred CCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCC-c---cccC----CeEEEcCccccC
Confidence 3688999997 44554544445555555555 3 4333322222 1 1223 4555 699999
Q ss_pred cCC--cccccceecHHHHHhhhc--CCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhcC
Q psy6205 154 GNG--HPVAAVITTKEIAKSFQE--TGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 154 ~~G--~p~~av~~~~~i~~~~~~--~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l~ 224 (224)
||| .+-|++++++++.+.+.. ....++.+.+.++..+++++..|+.+ +...++..++.+++.+.|++++
T Consensus 236 gg~~~~~GG~v~~~~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~a~~l~~~L~~~g 308 (431)
T 3ht4_A 236 GGGIVKTGGYIVGKEQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLA--PHVAGQALKGAIFTAAFLEKLG 308 (431)
T ss_dssp GTTTCSSCEEEEECHHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCceEEEEecHHHHHHHHHHhccCCcccccCccHHHHHHHHhHhhhH--HHHHHHHHHHHHHHHHHHHhCc
Confidence 985 567889999999888764 21122233333333344455555554 3456777778888888877653
No 156
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=97.82 E-value=3.5e-05 Score=67.80 Aligned_cols=77 Identities=18% Similarity=0.258 Sum_probs=50.0
Q ss_pred Cchh--cccccccCCcccccceecHHHHHhhhcCCcccccCCCCcH-HHHHHHHHHHHHHhh---hhHHHHHHHHHHHHH
Q psy6205 144 PDIV--TVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNP-VSCAVANAVMEVLET---ENLREHALDVGNQLH 217 (224)
Q Consensus 144 pDi~--~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p-~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~ 217 (224)
.|++ +++|+++ |...|.+++++++.+.+... .+.+++++++ ..++++.+++..+.+ +++.+++.++.++|.
T Consensus 239 ~di~~~s~sK~l~-G~~gG~i~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~ 315 (447)
T 3h7f_A 239 ADVVSTTVHKTLG-GGRSGLIVGKQQYAKAINSA--VFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIA 315 (447)
T ss_dssp CSEEEEESSGGGC-CCSCEEEEECGGGHHHHHHH--HTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEecCCcCCC-CCCeEEEEECHHHHHHHhhh--cCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 3666 5799996 45567788898888877543 2223444332 235555555665533 357888888899998
Q ss_pred Hhhhhc
Q psy6205 218 TPKKEN 223 (224)
Q Consensus 218 ~~l~~l 223 (224)
+.|+++
T Consensus 316 ~~L~~~ 321 (447)
T 3h7f_A 316 DRLMAP 321 (447)
T ss_dssp HHHTSH
T ss_pred HHHHhc
Confidence 888764
No 157
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=97.80 E-value=3.7e-05 Score=67.08 Aligned_cols=138 Identities=7% Similarity=-0.018 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhh--hhcCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAF--QLQGD 140 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~--~~~g~ 140 (224)
+++|++.++.+ ..++.+|++...+...|.+. +.+.++++.++ ++..+ ..+..+... ...+
T Consensus 193 ~~~l~~~l~~~---~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~~a~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~- 266 (444)
T 3if2_A 193 FEALENLPALK---EGRIGAICCSRPTNPTGNVL-TDEEMAHLAEIAKRYDIPLIIDNAYGMP-FPNIIYSDAHLNWDN- 266 (444)
T ss_dssp HHHHHTCHHHH---TTCEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHTTCCEEEECTTCTT-TTCCBCSCCCCCCCT-
T ss_pred HHHHHHHHHhc---CCCceEEEeCCCCCCCCCcC-CHHHHHHHHHHHHHCCCEEEEECCCCCc-ccccccccccccCCC-
Confidence 45566554322 23567777765566678755 55557777666 43211 111000000 0111
Q ss_pred CCCCchhcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHH
Q psy6205 141 DIIPDIVTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET-----ENLREHALDVGNQ 215 (224)
Q Consensus 141 ~v~pDi~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~-----~~l~~~~~~~g~~ 215 (224)
...++.+++|.+..|+++|++++++++.+.+... ....+++.++++++++.+.|+..+- +.+.+++++.-++
T Consensus 267 -~~i~~~S~sK~~~~G~r~G~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 343 (444)
T 3if2_A 267 -NTILCFSLSKIGLPGMRTGIIVADAKVIEAVSAM--NAVVNLAPTRFGAAIATPLVANDRIKQLSDNEIKPFYQKQATL 343 (444)
T ss_dssp -TEEEEEESTTTTCGGGCCEEEECCHHHHHHHHHH--HHHHHSSCCCHHHHHHHHHHHTSHHHHHHHHTHHHHHHHHHHH
T ss_pred -CEEEEechhhccCCCCceEEEEECHHHHHHHHHH--HHhccCCCChHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHH
Confidence 3344668999866789999999999999888643 3446788899999998888875321 1244445555555
Q ss_pred HHHhhh
Q psy6205 216 LHTPKK 221 (224)
Q Consensus 216 l~~~l~ 221 (224)
+.+.|+
T Consensus 344 ~~~~l~ 349 (444)
T 3if2_A 344 AVKLLK 349 (444)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 555554
No 158
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=97.79 E-value=6.8e-05 Score=64.65 Aligned_cols=121 Identities=8% Similarity=0.009 Sum_probs=77.2
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCc-------hhcccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPD-------IVTVGK 151 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pD-------i~~~~K 151 (224)
++.+|++...+...|.+.+ ++.++++.++ ++..+ ..+ ....+ +.|| +.+++|
T Consensus 180 ~~~~v~~~~p~NptG~~~~-~~~~~~l~~~a~~~~~~li~De~~~~~-~~~-----~~~~~--~~~~~~~~~i~~~s~sK 250 (417)
T 3g7q_A 180 ETGMICVSRPTNPTGNVIT-DEELMKLDRLANQHNIPLVIDNAYGVP-FPG-----IIFSE--ARPLWNPNIILCMSLSK 250 (417)
T ss_dssp TEEEEEEESSCTTTCCCCC-HHHHHHHHHHHHHTTCCEEEECTTCTT-TTC-----CBCSC--CCCCCCTTEEEEEESGG
T ss_pred CceEEEECCCCCCCCCccC-HHHHHHHHHHHHHcCCEEEEeCCCccc-ccc-----ccccc--cccCCCCCEEEEEechh
Confidence 5677777766777786554 4457777776 32211 011 11112 3333 668999
Q ss_pred cccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHhhhh
Q psy6205 152 PMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET-----ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 152 ~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~-----~~l~~~~~~~g~~l~~~l~~ 222 (224)
.+..|+++|++++++++++.+... ....+++.++++++++.+.|+...- +.+.++.++.-+++.+.|++
T Consensus 251 ~~~~G~r~G~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 324 (417)
T 3g7q_A 251 LGLPGSRCGIIIANDKTITAIANM--NGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRVQQTIAIIRR 324 (417)
T ss_dssp GTCTTSCCEEEECCHHHHHHHHHH--HHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCcceEEEEeCHHHHHHHHHh--hcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655689999999999999988653 3456888899999999888874321 12444555555666665543
No 159
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=97.79 E-value=6.5e-05 Score=64.80 Aligned_cols=120 Identities=17% Similarity=0.121 Sum_probs=78.9
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhccc----ccccC-Cc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG----KPMGN-GH 157 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~----K~l~~-G~ 157 (224)
++.+|+++.. .|.+.+.++..+.+++. +++ +|.... ...++ ..+|+++++ |.+++ |
T Consensus 151 ~~~~v~~~n~---tG~~~~l~~i~~l~~~~~~~li~Dea~~-~g~~~~----~~~~~--~~~di~~~S~~~sK~~~~~G- 219 (399)
T 2oga_A 151 RTRALLPVHL---YGHPADMDALRELADRHGLHIVEDAAQA-HGARYR----GRRIG--AGSSVAAFSFYPGKNLGCFG- 219 (399)
T ss_dssp TEEEECCBCG---GGCCCCHHHHHHHHHHHTCEECEECTTC-TTCEET----TEETT--CTTCEEEEECCTTSSSCCSS-
T ss_pred CCeEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccc-ccCccC----Ceecc--cccCEEEEeCCCCccCCcCC-
Confidence 5677876654 45566555555555555 443 322111 11233 447999885 99998 8
Q ss_pred ccccceec-HHHHHhhhc---CCc--c-----cccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITT-KEIAKSFQE---TGV--E-----YFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~-~~i~~~~~~---~~~--~-----~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+.|+++++ +++.+.+.. .+. . ...++..++++++++.++|+.+++ +.++.+++.+++.+.|+++
T Consensus 220 ~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~--~~~~~~~~~~~l~~~L~~~ 294 (399)
T 2oga_A 220 DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLDS--WNGRRSALAAEYLSGLAGL 294 (399)
T ss_dssp CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTHHH--HHHHHHHHHHHHHHHTTTC
T ss_pred ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhccC
Confidence 88888886 888776543 110 0 123456789999999999988754 6778888899999988764
No 160
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=97.78 E-value=1.3e-05 Score=71.55 Aligned_cols=82 Identities=20% Similarity=0.180 Sum_probs=50.5
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCcccc---chhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATSE---AQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDV 78 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~---a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l 78 (224)
+++|.|++|||+|||+|||+++++.++.++... +.++...++..+.+..+..+..+...+... +++..++.++.+
T Consensus 384 ~~~~~v~~vRG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~~i~l~PPL~i--t~~eid~~~~~l 461 (473)
T 4e3q_A 384 AERPNIGEYRGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPLGQSVVLCPPFIL--TEAQMDEMFDKL 461 (473)
T ss_dssp TTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEETTEEEECCCTTC--CHHHHHHHHHHH
T ss_pred hcCCCeeEEeecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEecCCEEEEeCCCCC--CHHHHHHHHHHH
Confidence 568999999999999999999999988876532 223333333334433333333322111111 266677777777
Q ss_pred HHHHHHH
Q psy6205 79 QDLIEAM 85 (224)
Q Consensus 79 ~~~~~~~ 85 (224)
++.++++
T Consensus 462 ~~al~~v 468 (473)
T 4e3q_A 462 EKALDKV 468 (473)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776653
No 161
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=97.78 E-value=2.5e-05 Score=65.64 Aligned_cols=138 Identities=9% Similarity=0.034 Sum_probs=78.1
Q ss_pred HHHHHHHHHHH-ccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCC--ccccccchhhhhcC
Q psy6205 75 AQDVQDLIEAM-GRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGF--GRVGTHWWAFQLQG 139 (224)
Q Consensus 75 ~~~l~~~~~~~-~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~--GrtG~~~~~~~~~g 139 (224)
+++|++.++.- ..++.++.+|++++. +..|.+.+ +++++++.++ ++++| |+++. ....-...
T Consensus 128 ~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~ 204 (359)
T 1svv_A 128 VADIESALHENRSEHMVIPKLVYISNT-TEVGTQYT-KQELEDISASCKEHGLYLFLDGARLASALSSPVN-DLTLADIA 204 (359)
T ss_dssp HHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSCCCC-HHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC-CCCHHHHH
T ss_pred HHHHHHHHHHHHhccCCCceEEEEEcC-CCCceecC-HHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc-chhhhhhh
Confidence 45666666531 011235889999987 56777665 5888888777 65544 55543 11110111
Q ss_pred CCCCCchhcc--cccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHH
Q psy6205 140 DDIIPDIVTV--GKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGN 214 (224)
Q Consensus 140 ~~v~pDi~~~--~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~ 214 (224)
..+|++++ .|. ++.+.+|++++++++++.+........+++..++...++..+ .+++ +++.++++++.+
T Consensus 205 --~~~d~~~~s~~K~-g~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~ 278 (359)
T 1svv_A 205 --RLTDMFYIGATKA-GGMFGEALIILNDALKPNARHLIKQRGALMAKGWLLGIQFEV---LMKDNLFFELGAHSNKMAA 278 (359)
T ss_dssp --HHCSEEEEECTTT-TCSSCEEEEECSGGGCTTHHHHHHHTTCCCTTTHHHHHHHHH---HTSTTHHHHHHHHHHHHHH
T ss_pred --hcCCEEEEecccC-CCCCceEEEEEcccHHHHHHHHHhcCCcccccchhhHHHHHH---HHhhhhHHHHHHHHHHHHH
Confidence 23787764 663 322566788889888776653200123444433333333322 3433 357788889999
Q ss_pred HHHHhhh
Q psy6205 215 QLHTPKK 221 (224)
Q Consensus 215 ~l~~~l~ 221 (224)
+|.+.|+
T Consensus 279 ~l~~~L~ 285 (359)
T 1svv_A 279 ILKAGLE 285 (359)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9988884
No 162
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=97.75 E-value=8e-05 Score=64.72 Aligned_cols=105 Identities=10% Similarity=-0.015 Sum_probs=70.1
Q ss_pred CCceEEEEccccCC-CCcccCCHHHHHHHHHH-------------HHhC--Cccccc---cchhhh----hcCCCCCCch
Q psy6205 90 KRPCAFFAESLQSC-GGQIIPPANYLREVYKH-------------VQVG--FGRVGT---HWWAFQ----LQGDDIIPDI 146 (224)
Q Consensus 90 ~~iaavi~Epv~~~-~G~~~~~~~~l~~~~~~-------------v~tG--~GrtG~---~~~~~~----~~g~~v~pDi 146 (224)
.++.+|++.|...+ .|.+.+..+ ++++.++ ++.. |+..+. .++... ..+ ...++
T Consensus 179 ~~~~~v~~~p~~~NPtG~~~~~~~-~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~ 255 (427)
T 3ppl_A 179 PQVKGMWVVPVFSNPTGFTVTEDV-AKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPN--RFWAF 255 (427)
T ss_dssp TTEEEEEECCSSCTTTCCCCCHHH-HHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTT--SEEEE
T ss_pred CCCeEEEECCCCCCCCCccCCHHH-HHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCC--cEEEE
Confidence 46788888986544 777666553 5555442 6666 443331 012211 222 45567
Q ss_pred hcccccccCCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHH
Q psy6205 147 VTVGKPMGNGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEV 199 (224)
Q Consensus 147 ~~~~K~l~~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~ 199 (224)
.+++|.++.|+.+|++++++++++.+... ....+++.++++.+++.+.|+.
T Consensus 256 ~S~SK~~~~G~r~G~~~~~~~l~~~~~~~--~~~~~~~~~~~~q~~~~~~l~~ 306 (427)
T 3ppl_A 256 TSTSKITLAGAGVSFFLTSAENRKWYTGH--AGIRGIGPNKVNQLAHARYFGD 306 (427)
T ss_dssp EESTTTSCTTSSCEEEECCHHHHHHHHHH--HHHHCSCCCHHHHHHHHHHHCS
T ss_pred echhhccCcCccEEEEEcCHHHHHHHHHH--hhcccCCCCHHHHHHHHHHHhC
Confidence 79999977789999999999999888643 3346788889988888777754
No 163
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=97.74 E-value=0.00016 Score=60.35 Aligned_cols=125 Identities=10% Similarity=0.055 Sum_probs=81.6
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-------HHhCCccccccchhhhhcCCCCCCchhccccccc-CCcccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMG-NGHPVAAV 162 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~-~G~p~~av 162 (224)
+..++++...+...|.+.+.++..+.+++. ++.+|+..+. . .....+ ..-.+.+++|.+| .|+.+|++
T Consensus 135 ~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~ivDea~~~~~~~~~-~-~~~~~~--~~i~~~S~sK~~g~~G~r~G~~ 210 (337)
T 3p1t_A 135 RDDCVVLANPSNPTGQALSAGELDQLRQRAGKLLIDETYVDYSSFRA-R-GLAYGE--NELVFRSFSKSYGLAGLRLGAL 210 (337)
T ss_dssp TTEEEEEESSCTTTCCCCCHHHHHHHHHHCSEEEEECTTGGGSSCSS-S-CCCCBT--TEEEEEESSSTTCCTTTCCEEE
T ss_pred CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCcEEEECCChhhccccc-c-ccccCC--CEEEEeeCchhccCcchheEEE
Confidence 346777776677788877777655555443 5555544332 1 111111 1112347899998 78999999
Q ss_pred eecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 163 ITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 163 ~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
++++++.+.+... ..+++.++++.+++.+.|+..+ -++..+++.+.-++|.+.|+++
T Consensus 211 ~~~~~~~~~l~~~----~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~ 268 (337)
T 3p1t_A 211 FGPSELIAAMKRK----QWFCNVGTLDLHALEAALDNDRAREAHIAKTLAQRRRVADALRGL 268 (337)
T ss_dssp ECCHHHHHHHHTT----SCTTCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EeCHHHHHHHHhh----cCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999988643 3467788998888888886532 2345566666777888888764
No 164
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=97.73 E-value=0.00036 Score=58.36 Aligned_cols=126 Identities=10% Similarity=-0.039 Sum_probs=84.1
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH----------HHhCCccccccchhhhhcCCCCCCchhcc--cccccCCc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH----------VQVGFGRVGTHWWAFQLQGDDIIPDIVTV--GKPMGNGH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~--~K~l~~G~ 157 (224)
+++.+|+++..+...|.+.+.++..+.+++. +++ +|... +..+.+ .+|+++. +|.++++.
T Consensus 120 ~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~-~~~~~---~~~~~~----~~d~~~~s~~K~~~~~~ 191 (352)
T 1iug_A 120 EGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTS-LLVGE---VALEAM----GVDAAASGSQKGLMCPP 191 (352)
T ss_dssp SSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTT-BTTBC---CCSGGG----TCSEEEEESSSTTCCCS
T ss_pred cCCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCcc-ccCcc---eecccc----CeeEEEecCcccccCCC
Confidence 3567899999998889888755555555543 222 33221 112222 3787764 59887766
Q ss_pred ccccceecHHHHHhhhc------------CCcccccCCCCcHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITTKEIAKSFQE------------TGVEYFNTYGGNPVSCAVANAVMEVLETE--NLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~~~i~~~~~~------------~~~~~~~T~~~~p~~~aaa~a~l~~~~~~--~l~~~~~~~g~~l~~~l~~l 223 (224)
.+|++++++++.+.+.. .......+++.|+.+++++.++|+.+++. ++.++++++.+++.+.|+++
T Consensus 192 g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 271 (352)
T 1iug_A 192 GLGFVALSPRALERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYGVGEEG 271 (352)
T ss_dssp CEEEEEECHHHHHTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ceeEEEECHHHHHHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 67999999998765210 00011235567888999999999998654 77888899999999998764
No 165
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=97.73 E-value=0.00011 Score=62.63 Aligned_cols=120 Identities=18% Similarity=0.157 Sum_probs=79.6
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHh-CCccccccchhhhhcCCCCCCchhccc----ccccC-
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQV-GFGRVGTHWWAFQLQGDDIIPDIVTVG----KPMGN- 155 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~t-G~GrtG~~~~~~~~~g~~v~pDi~~~~----K~l~~- 155 (224)
+++++|+++...| ...+-++..+.+++. +++ |+...|+ ..+ ..+|++++| |.+++
T Consensus 122 ~~~~~v~~~~~~G---~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~------~~~--~~~di~~~Sf~~~K~l~~~ 190 (367)
T 3nyt_A 122 PRTKAIIPVSLYG---QCADFDAINAIASKYGIPVIEDAAQSFGASYKGK------RSC--NLSTVACTSFFPSAPLGCY 190 (367)
T ss_dssp TTEEEECCBCGGG---CCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTE------ETT--SSSSEEEEECCTTSSSCCS
T ss_pred cCCcEEEeeCCcc---ChhhHHHHHHHHHHcCCEEEEECccccCCeECCe------ecc--CCCCEEEEECCCCCcCCCc
Confidence 4678888766554 344444444444444 443 3322232 233 344999987 99998
Q ss_pred Cccccccee-cHHHHHhhhcC---Cc-------ccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 156 GHPVAAVIT-TKEIAKSFQET---GV-------EYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 156 G~p~~av~~-~~~i~~~~~~~---~~-------~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
|. .|++++ ++++++.+... +. ..+.++..+++.++++++.++.++ ++.++.+++.+++++.|+++
T Consensus 191 g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~--~~~~~~~~~~~~~~~~L~~~ 266 (367)
T 3nyt_A 191 GD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIFE--EEIALRQKVAAEYDLSLKQV 266 (367)
T ss_dssp SC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHHHHT
T ss_pred Cc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccC
Confidence 76 667777 57787766431 10 113578899999999999998874 46788899999999999875
No 166
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=97.70 E-value=7.6e-05 Score=64.79 Aligned_cols=122 Identities=16% Similarity=0.140 Sum_probs=82.9
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHH------------H------HHhCCccccccchhhhhcCCCCCCchhcc--c
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYK------------H------VQVGFGRVGTHWWAFQLQGDDIIPDIVTV--G 150 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~------------~------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~--~ 150 (224)
++.+|++++.....|.+.+.++..+.+++ + ++ ++|++. ..... ..+|++++ +
T Consensus 175 ~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livDea~-~~~~~~---~~~~~----~~~d~~~~s~~ 246 (432)
T 3a9z_A 175 TTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTDAAQ-ALGKRR---VDVED----LGVDFLTIVGH 246 (432)
T ss_dssp TEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEECTT-TTTTSC---CCHHH----HCCSEEEEEGG
T ss_pred CceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEEchh-hhCCcc---cChhh----cCCCEEEEehh
Confidence 57899999999889998887776666654 3 33 333322 11122 23788765 9
Q ss_pred ccccCCcccccceecHHH-HHhhhcCC-----cccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhh
Q psy6205 151 KPMGNGHPVAAVITTKEI-AKSFQETG-----VEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 151 K~l~~G~p~~av~~~~~i-~~~~~~~~-----~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~ 222 (224)
|.+ |..+|++++++++ .+.+.... .....+++.|+.+++++.++|+.+++ +++.++++++.++|.+.|++
T Consensus 247 K~~--g~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~l~~~L~~ 324 (432)
T 3a9z_A 247 KFY--GPRIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLVSENCETYEAHMRDIRDYLEERLEA 324 (432)
T ss_dssp GTT--CCSCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred Hhc--CCcceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 976 3448899998765 22232110 01224567889999999999998865 57888899999999998876
No 167
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=97.69 E-value=0.00049 Score=61.58 Aligned_cols=146 Identities=16% Similarity=0.089 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCC-CCc
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDI-IPD 145 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v-~pD 145 (224)
.++|++.++.-...+.++++|++.......|.+.+.++..+.+++. ++.|+..... .+.+...+ + .+|
T Consensus 243 ~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~~~-~~~~~~~g--~~~aD 319 (515)
T 2jis_A 243 PEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLLSQ-THRHLLDG--IQRAD 319 (515)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCT-TTGGGGTT--GGGCS
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHhCh-hhHhhcCC--CccCC
Confidence 4556666653212334678899988777788888766676666666 5665544432 23322334 5 689
Q ss_pred hhcc--cccccCCcccccceecHH--HHHhhhcC--Ccccc-----------c------CCCCcHHHHHHHHHHHHHHhh
Q psy6205 146 IVTV--GKPMGNGHPVAAVITTKE--IAKSFQET--GVEYF-----------N------TYGGNPVSCAVANAVMEVLET 202 (224)
Q Consensus 146 i~~~--~K~l~~G~p~~av~~~~~--i~~~~~~~--~~~~~-----------~------T~~~~p~~~aaa~a~l~~~~~ 202 (224)
++++ .|.+++.+.+|+++++++ +++..... ..... . +.....++..++++.+..-.-
T Consensus 320 ~v~~s~hK~l~~p~g~G~l~~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg~~g~ 399 (515)
T 2jis_A 320 SVAWNPHKLLAAGLQCSALLLQDTSNLLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQGDQGL 399 (515)
T ss_dssp EEEECTTSTTCCCSCCEEEEESCCSCHHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHHHHHH
T ss_pred EEEECcccccCCCCCeeEEEEeChHHHHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHhHHHH
Confidence 9987 999887788999999877 65532110 00000 0 111124444445554432222
Q ss_pred hhHHHHHHHHHHHHHHhhhhc
Q psy6205 203 ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 203 ~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++.++..++.++|.++|+++
T Consensus 400 ~~~~~~~~~~a~~l~~~L~~~ 420 (515)
T 2jis_A 400 ERRIDQAFVLARYLVEEMKKR 420 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHhcC
Confidence 457788889999999999864
No 168
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=97.69 E-value=0.00018 Score=63.59 Aligned_cols=127 Identities=13% Similarity=0.047 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCch
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDI 146 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi 146 (224)
+++|++.++. +.+.+|++|+.....|.+.+.++..+.+++. +++ ++. . +..+. ..+|+
T Consensus 189 ~~~l~~ai~~-----~tv~lV~le~p~NptG~v~dl~~I~~la~~~g~~livD~a~~----~~~-~--~~~~~--~g~Di 254 (445)
T 1qgn_A 189 VGALELALNQ-----KKVNLFFTESPTNPFLRCVDIELVSKLCHEKGALVCIDGTFA----TPL-N--QKALA--LGADL 254 (445)
T ss_dssp HHHHHHHHHH-----SCEEEEEEESSCTTTCCCCCHHHHHHHHHHTTCEEEEECTTT----CTT-T--CCTTT--TTCSE
T ss_pred HHHHHHHhcc-----CCCCEEEEeCCCCCCCcccCHHHHHHHHHHcCCEEEEECCCc----ccc-c--CCccc--cCCEE
Confidence 4556655541 3348999999998899888766666666655 432 221 1 12233 55898
Q ss_pred hc--ccccccCC--cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHH
Q psy6205 147 VT--VGKPMGNG--HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLH 217 (224)
Q Consensus 147 ~~--~~K~l~~G--~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~ 217 (224)
++ ++|.++++ .++|++++++++++.+... ........+|..+..++..|+.+.. +...++.+.+.++|.
T Consensus 255 v~~S~sK~~gg~gd~~~G~l~~~~~l~~~l~~~--~~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~ 329 (445)
T 1qgn_A 255 VLHSATKFLGGHNDVLAGCISGPLKLVSEIRNL--HHILGGALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILE 329 (445)
T ss_dssp EEECTTTTTTCSSSCCCEEEEECHHHHHHHHHH--HHHHCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCcccccccccceEEEEEECHHHHHHHHHH--HHHhCCCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 86 89999874 4799999999998877532 1111223478888877777776632 233444444444443
No 169
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=97.67 E-value=0.00015 Score=64.65 Aligned_cols=143 Identities=15% Similarity=0.139 Sum_probs=83.7
Q ss_pred HHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCC-CCch
Q psy6205 76 QDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDI-IPDI 146 (224)
Q Consensus 76 ~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v-~pDi 146 (224)
++|++.++.-...+..+.+|++.......|.+.+.++..+.+++. ++.|+..... +.....+ + .+|+
T Consensus 243 ~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~--~~~~~~g--i~~~D~ 318 (497)
T 2qma_A 243 TKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYGGALILSS--HKSRLKG--VERAHS 318 (497)
T ss_dssp GGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGST--TGGGGTT--GGGCSE
T ss_pred HHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhhHHHHhCc--chHhhcC--cccCCE
Confidence 445555543111122355777776666778888777777777776 7777655443 3333444 6 7899
Q ss_pred hcc--cccccCCcccccceecHHH-HHhhhcCCcccc---cCCCCcHHHHH----------HHHHHHHHHhhh---hHHH
Q psy6205 147 VTV--GKPMGNGHPVAAVITTKEI-AKSFQETGVEYF---NTYGGNPVSCA----------VANAVMEVLETE---NLRE 207 (224)
Q Consensus 147 ~~~--~K~l~~G~p~~av~~~~~i-~~~~~~~~~~~~---~T~~~~p~~~a----------aa~a~l~~~~~~---~l~~ 207 (224)
+++ .|.+++++++|+++++++. ++.+.... .+. .+...+++.++ +..++++.+.++ ++.+
T Consensus 319 i~~s~hK~l~~p~~~G~l~~~~~~~~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~ 397 (497)
T 2qma_A 319 ISVDFHKLFYQTISCGALLVNDKSNFKFLLHHA-DYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYD 397 (497)
T ss_dssp EEEETTTTTCCCSSCEEEEESCGGGGGGGCC---------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHH
T ss_pred EEEcchhccCCCcceEEEEEeCHHHHHHhcCCc-hhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHH
Confidence 887 9999888899999987553 44443211 111 11123344332 223466666443 5777
Q ss_pred HHHHHHHHHHHhhhhc
Q psy6205 208 HALDVGNQLHTPKKEN 223 (224)
Q Consensus 208 ~~~~~g~~l~~~l~~l 223 (224)
+..++.++|.+.|+++
T Consensus 398 ~~~~~a~~l~~~L~~~ 413 (497)
T 2qma_A 398 HLLAQTLEVADMIRTN 413 (497)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHhhC
Confidence 8889999999999864
No 170
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=97.67 E-value=0.00017 Score=60.81 Aligned_cols=131 Identities=14% Similarity=0.064 Sum_probs=73.5
Q ss_pred CCCceEEEEccccCCCCcccCCHHHHHHHHHH-HHhCCc--cccc-cchhhhhcCC-----CCCCchh--cccccccCCc
Q psy6205 89 GKRPCAFFAESLQSCGGQIIPPANYLREVYKH-VQVGFG--RVGT-HWWAFQLQGD-----DIIPDIV--TVGKPMGNGH 157 (224)
Q Consensus 89 ~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-v~tG~G--rtG~-~~~~~~~~g~-----~v~pDi~--~~~K~l~~G~ 157 (224)
.+++++|++++.+...|-...+.+.++++.++ -..|.- --+. .++.....+. .-..|++ +++|+++++.
T Consensus 135 ~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~ 214 (359)
T 3pj0_A 135 REPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGIA 214 (359)
T ss_dssp SSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEESSSTTCCSS
T ss_pred cCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEeccccCCCcc
Confidence 35789999998876543345677778777776 111110 0000 0011111110 0124666 7899887653
Q ss_pred ccccceecHHHHHhhhcCCcccc-cCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITTKEIAKSFQETGVEYF-NTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~~~i~~~~~~~~~~~~-~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
. +.+++++++++.+......+. +++..++.+++ +.+.|+... +..++..+..+++.+.|+++
T Consensus 215 g-g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a-~~~~l~~~~--~~~~~~~~~~~~l~~~L~~~ 277 (359)
T 3pj0_A 215 G-AILAGNDDFVQEAKIWKRRYGGDLISLYPYILS-ADYYFEKRI--GKMAEYFEAAKGLAERFNSC 277 (359)
T ss_dssp C-EEEEECHHHHHHHHHHHHHTTCCCSCCHHHHHH-HHHHHHHHG--GGHHHHHHHHHHHHHHHHTS
T ss_pred e-EEEECCHHHHHHHHHHHHHhCCCcchhHHHHHH-HHHHHHHHH--HHhHHHHHHHHHHHHHHhhC
Confidence 3 567889999988753211122 34455555544 445665542 34556778888888888765
No 171
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=97.67 E-value=0.00016 Score=62.76 Aligned_cols=144 Identities=15% Similarity=0.076 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccc-cchhhhhcCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGT-HWWAFQLQGDD 141 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~-~~~~~~~~g~~ 141 (224)
+++|++.++ +.+.+..++++...+...|.+. +.+.++++.++ +..+|...+. .......+. +
T Consensus 182 ~~~l~~~l~---~~~~~~~~v~i~~p~NPtG~~~-~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~-~ 256 (420)
T 4f4e_A 182 FDGMLAALN---GYEPGTIVVLHACCHNPTGVDL-NDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFA-A 256 (420)
T ss_dssp HHHHHHHHT---TCCTTCEEEEECSSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHH-H
T ss_pred HHHHHHHHH---hCCCCCEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHH-h
Confidence 455555553 2345677888888887788654 55667777666 6677755431 112222221 0
Q ss_pred CCCch---hccccccc-CCccccccee---cHHHHHhhhcCCc-cc-ccCCCCcHHHHHHHHHHHHHH------h--hhh
Q psy6205 142 IIPDI---VTVGKPMG-NGHPVAAVIT---TKEIAKSFQETGV-EY-FNTYGGNPVSCAVANAVMEVL------E--TEN 204 (224)
Q Consensus 142 v~pDi---~~~~K~l~-~G~p~~av~~---~~~i~~~~~~~~~-~~-~~T~~~~p~~~aaa~a~l~~~------~--~~~ 204 (224)
..+++ .+++|.++ .|+++|++++ ++++++.+..... .. ..+...++++.+++.+.|+.- + -+.
T Consensus 257 ~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 336 (420)
T 4f4e_A 257 ANLNVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQELGE 336 (420)
T ss_dssp TTCCEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 22333 36899999 6899998753 5666654322100 11 233344666666666666542 1 145
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q psy6205 205 LREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 205 l~~~~~~~g~~l~~~l~~l 223 (224)
+.++++++.++|.+.|+++
T Consensus 337 ~~~~~~~~~~~l~~~L~~~ 355 (420)
T 4f4e_A 337 MRDRIRAMRNGLVERLKAA 355 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 6778888888898888765
No 172
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=97.67 E-value=0.00015 Score=62.17 Aligned_cols=126 Identities=13% Similarity=0.083 Sum_probs=78.1
Q ss_pred CceEEEE-ccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCch--hccccccc-
Q psy6205 91 RPCAFFA-ESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDI--VTVGKPMG- 154 (224)
Q Consensus 91 ~iaavi~-Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi--~~~~K~l~- 154 (224)
++.+|++ .| ....|.+. +++.++++.++ ++..|...|. ......+. + ..++ .+++|.++
T Consensus 164 ~~~~v~~~~p-~NPtG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~-~-~~~i~~~s~SK~~~~ 238 (385)
T 1b5p_A 164 RTKALVVNSP-NNPTGAVY-PKEVLEALARLAVEHDFYLVSDEIYEHLLYEGE-HFSPGRVA-P-EHTLTVNGAAKAFAM 238 (385)
T ss_dssp TEEEEEEESS-CTTTCCCC-CHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC-CCCGGGTC-T-TTEEEEEESTTTTTC
T ss_pred CCEEEEEeCC-CCCCCCCc-CHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCCHHHcC-C-CCEEEEEechhhcCC
Confidence 3555555 55 33456544 55666666666 5444422222 12222221 1 1123 26899998
Q ss_pred CCcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHH---Hhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 155 NGHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEV---LET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 155 ~G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~---~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
.|+.+|++++++++++.+... ....|++.++++..++.++|+. ..+ ++..+++++.-+++.+.|+++
T Consensus 239 ~G~RiG~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 310 (385)
T 1b5p_A 239 TGWRIGYACGPKEVIKAMASV--SRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLTAL 310 (385)
T ss_dssp GGGCCEEEECCHHHHHHHHHH--HHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccceEEEEeCHHHHHHHHHH--HhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 689999999999998887642 2235678889999888888864 222 346677777788888887753
No 173
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=97.65 E-value=0.00013 Score=62.79 Aligned_cols=133 Identities=16% Similarity=0.028 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHh-CCccccccchhhhhcCCCCCCc
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQV-GFGRVGTHWWAFQLQGDDIIPD 145 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~t-G~GrtG~~~~~~~~~g~~v~pD 145 (224)
+++|++.++. .++++.+|++++..| ...+.++..+.+++. +++ |+...|. ... .+ -..|
T Consensus 109 ~~~l~~~i~~---~~~~~~~v~~~~~~G---~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~-~~~--~~---~~~~ 176 (394)
T 1o69_A 109 VDLLKLAIKE---CEKKPKALILTHLYG---NAAKMDEIVEICKENDIVLIEDAAEALGSFYKNK-ALG--TF---GEFG 176 (394)
T ss_dssp HHHHHHHHHH---CSSCCCEEEEECGGG---CCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE-ETT--SS---SSEE
T ss_pred HHHHHHHHhc---ccCCceEEEEECCCC---ChhhHHHHHHHHHHcCCEEEEECcCcccceeCCc-ccc--cc---cCcE
Confidence 4566666642 223678899998544 444445555555554 666 6544443 111 12 1368
Q ss_pred hhcc--cccccCCcccccceec-HHHHHhhhcC---Cc---------ccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHH
Q psy6205 146 IVTV--GKPMGNGHPVAAVITT-KEIAKSFQET---GV---------EYFNTYGGNPVSCAVANAVMEVLETENLREHAL 210 (224)
Q Consensus 146 i~~~--~K~l~~G~p~~av~~~-~~i~~~~~~~---~~---------~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~ 210 (224)
+.++ +|.++++ -+|+++++ +++.+.+... .. ..+.++..+++.++++++.++.+++ ..++.+
T Consensus 177 ~~s~s~~K~l~~~-~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~~--~~~~~~ 253 (394)
T 1o69_A 177 VYSYNGNKIITTS-GGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLEQ--RVLKKR 253 (394)
T ss_dssp EEECCTTSSSCCS-SCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHHH--HHHHHH
T ss_pred EEEEeCCccCCCC-CceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHHHHHH--HHHHHH
Confidence 8888 6888754 47889995 8888776431 10 0112233678999998887877755 678899
Q ss_pred HHHHHHHHhhhh
Q psy6205 211 DVGNQLHTPKKE 222 (224)
Q Consensus 211 ~~g~~l~~~l~~ 222 (224)
++.+++.+.|++
T Consensus 254 ~~~~~l~~~L~~ 265 (394)
T 1o69_A 254 EIYEWYKEFLGE 265 (394)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHhcc
Confidence 999999999875
No 174
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=97.65 E-value=0.00014 Score=63.16 Aligned_cols=118 Identities=12% Similarity=-0.008 Sum_probs=80.1
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHH-H--------HHhCCccccccchhhhhcCCCCCCchh--cccccccC-Cc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYK-H--------VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN-GH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~-~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~-G~ 157 (224)
+++.+|+++......|.+.+.++..+.+++ . ++..+.. .. .. .++ .|++ +++|.+++ |.
T Consensus 146 ~~t~~v~l~~p~NptG~v~~l~~i~~la~~~~~~~li~De~~~~~~~-~~-~~---~~~----~di~~~S~sK~~~~~g~ 216 (404)
T 1e5e_A 146 PNTKIVYFETPANPTLKIIDMERVCKDAHSQEGVLVIADNTFCSPMI-TN-PV---DFG----VDVVVHSATKYINGHTD 216 (404)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHTSTTCEEEEECTTTCTTT-CC-GG---GGT----CSEEEEETTTTTTCSSC
T ss_pred CCCcEEEEECCCCCCCcccCHHHHHHHHHhhcCCEEEEECCCchhhh-CC-cc---ccC----CEEEEEcCccccCCCCC
Confidence 367899999998889988887777777777 5 4443321 11 11 133 5666 68999986 57
Q ss_pred cc-ccceecHHHHH-hhhcCCccccc-CCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHH
Q psy6205 158 PV-AAVITTKEIAK-SFQETGVEYFN-TYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHT 218 (224)
Q Consensus 158 p~-~av~~~~~i~~-~~~~~~~~~~~-T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~ 218 (224)
++ |++++++++.+ .+... .... +...+|++++++.++|+.+. .+...++.+.+.+++++
T Consensus 217 ri~G~~~~~~~~~~~~l~~~--~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~ 280 (404)
T 1e5e_A 217 VVAGLICGKADLLQQIRMVG--IKDITGSVISPHDAWLITRGLSTLNIRMKAESENAMKVAEYLKS 280 (404)
T ss_dssp CCCEEEEECHHHHHHHHHTC--CCCCCCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred CeEEEEEECHHHHHHHHHHH--HHhCCCCCCCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 87 99999999888 77543 2222 45689999999998887653 23345555555555554
No 175
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=97.59 E-value=0.00016 Score=61.79 Aligned_cols=145 Identities=14% Similarity=0.060 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCcccc-ccchhhhhc-C-
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVG-THWWAFQLQ-G- 139 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG-~~~~~~~~~-g- 139 (224)
+++|++.++ +...+..++++...+...|.+. +.+.++++.++ +..+|...+ ........+ +
T Consensus 160 ~~~l~~~l~---~~~~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 235 (397)
T 3fsl_A 160 FNDLLATLK---TLQAGSIVLLHPCCHNPTGADL-TNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASA 235 (397)
T ss_dssp HHHHHHHHT---TCCTTCEEEECSSSCTTTCCCC-CHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHT
T ss_pred HHHHHHHHH---hCCCCCEEEEeCCCCCCCCcCC-CHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhc
Confidence 455555553 2334566777766676677654 55556666665 666664432 011222222 1
Q ss_pred CCCCCchhccccccc-CCccccccee---cHHHHHhhhcCCc-cc-ccCCCCcHHHHHHHHHHHHHH------h--hhhH
Q psy6205 140 DDIIPDIVTVGKPMG-NGHPVAAVIT---TKEIAKSFQETGV-EY-FNTYGGNPVSCAVANAVMEVL------E--TENL 205 (224)
Q Consensus 140 ~~v~pDi~~~~K~l~-~G~p~~av~~---~~~i~~~~~~~~~-~~-~~T~~~~p~~~aaa~a~l~~~------~--~~~l 205 (224)
.+....+.+++|.+| .|+++|++++ ++++++.+..... .. ..+...++++.+++.+.|+.- + -+++
T Consensus 236 ~~~~i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~ 315 (397)
T 3fsl_A 236 GLPALVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEEM 315 (397)
T ss_dssp TCCEEEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 012222346899999 7999999874 5666554432100 11 123344666666666655521 1 2456
Q ss_pred HHHHHHHHHHHHHhhhhc
Q psy6205 206 REHALDVGNQLHTPKKEN 223 (224)
Q Consensus 206 ~~~~~~~g~~l~~~l~~l 223 (224)
.++++++.++|.+.|+++
T Consensus 316 ~~~~~~~~~~l~~~L~~~ 333 (397)
T 3fsl_A 316 RTRILAMRQELVKVLSTE 333 (397)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 778888888888888764
No 176
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=97.58 E-value=0.00022 Score=60.18 Aligned_cols=119 Identities=13% Similarity=0.040 Sum_probs=70.6
Q ss_pred ceEEEEccccCCC-CcccCCHHHHHHHHHH------------H-----HhCCccccccchhhhhcCCCCCCchh--cccc
Q psy6205 92 PCAFFAESLQSCG-GQIIPPANYLREVYKH------------V-----QVGFGRVGTHWWAFQLQGDDIIPDIV--TVGK 151 (224)
Q Consensus 92 iaavi~Epv~~~~-G~~~~~~~~l~~~~~~------------v-----~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K 151 (224)
+.+|++++..... | ...+++.++++.++ . ...+|++.. .+. -..|++ +++|
T Consensus 136 ~~~v~~~~p~np~~G-~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~-~~~-------~~~d~~~~s~sK 206 (357)
T 3lws_A 136 IACLLLELPQREIGG-VAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYEKTAA-EIA-------GLFDSIYISFYK 206 (357)
T ss_dssp CSEEEEESSBGGGTS-BCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCHH-HHH-------TTSSEEEEESSS
T ss_pred cceEEEEcccccCCc-eeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcCCChH-HHH-------hcCCEEEEeccc
Confidence 7889999887654 5 46678888888877 1 222333332 111 113444 8999
Q ss_pred cccCCcccccceecHHHHHhhhcCCcccc-cCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 152 PMGNGHPVAAVITTKEIAKSFQETGVEYF-NTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 152 ~l~~G~p~~av~~~~~i~~~~~~~~~~~~-~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
.+++... |.+++++++++.+......+. +++..++.+ +++.++|+...+ ..++..+..+++.+.|+++
T Consensus 207 ~~~~~~g-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~--~~~~~~~~~~~l~~~L~~~ 275 (357)
T 3lws_A 207 GLGGIAG-AILAGPAAFCQTARIWKRRYGGDLISLYPYI-VSADYYYELRKD--RMGQYYEQAKQLAEQFNAL 275 (357)
T ss_dssp TTCCSSC-EEEEECHHHHHHHHHHHHHTTCCCSCCHHHH-HHHHHHHHHHTT--CHHHHHHHHHHHHHHHHTS
T ss_pred cCCCCce-EEEEcCHHHHHHHHHHHHHhcCCcccchHHH-HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhC
Confidence 9954322 778889999888753211122 344445554 445567766422 2344567777888888764
No 177
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=97.54 E-value=0.0014 Score=58.44 Aligned_cols=146 Identities=17% Similarity=0.094 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCC-CCc
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDI-IPD 145 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v-~pD 145 (224)
+++|++.++.....+.++.+|++.-.....|.+.+.++..+.+++. ++.|+..... -+.....| + .+|
T Consensus 229 ~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~~~-~~~~~~~g--~~~~D 305 (504)
T 2okj_A 229 PADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSR-KHRHKLNG--IERAN 305 (504)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCT-TTGGGGTT--GGGCS
T ss_pred HHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHhCH-hhHhhcCC--cccCC
Confidence 4566666653222234578888876666678887777777777766 5555432211 11122223 4 589
Q ss_pred hhccc--ccccCCcccccceecH-HHHHhhhcC--Ccccc-cC----------------CCCcHHHHHHHHHHHHHHhhh
Q psy6205 146 IVTVG--KPMGNGHPVAAVITTK-EIAKSFQET--GVEYF-NT----------------YGGNPVSCAVANAVMEVLETE 203 (224)
Q Consensus 146 i~~~~--K~l~~G~p~~av~~~~-~i~~~~~~~--~~~~~-~T----------------~~~~p~~~aaa~a~l~~~~~~ 203 (224)
+++++ |.+++.+++|++++++ ++++..... ...+. .+ -..+++++.++++++..-.-+
T Consensus 306 ~i~~~~hK~~~~p~~~g~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg~~g~~ 385 (504)
T 2okj_A 306 SVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFE 385 (504)
T ss_dssp EEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHHHHHHH
T ss_pred EEEECchhhcCCCcceEEEEEECHHHHHHHhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhhHHHHH
Confidence 99875 9888778899999986 465532111 11110 11 112466666666655422223
Q ss_pred hHHHHHHHHHHHHHHhhhhc
Q psy6205 204 NLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 204 ~l~~~~~~~g~~l~~~l~~l 223 (224)
++.++..++.++|.+.|+++
T Consensus 386 ~~~~~~~~~a~~l~~~L~~~ 405 (504)
T 2okj_A 386 NQINKCLELAEYLYAKIKNR 405 (504)
T ss_dssp HHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 56778889999999998764
No 178
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=97.51 E-value=0.00026 Score=60.41 Aligned_cols=118 Identities=15% Similarity=0.144 Sum_probs=76.3
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHh-CCccccccchhhhhcCCCCCCchhccc----ccccCCc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQV-GFGRVGTHWWAFQLQGDDIIPDIVTVG----KPMGNGH 157 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~t-G~GrtG~~~~~~~~~g~~v~pDi~~~~----K~l~~G~ 157 (224)
++.+|++.+.. |.+.+.++..+.+++. +++ |+...|+ .++ . +|+++++ |.+++|
T Consensus 127 ~~~~v~~~~~~---G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~------~~~--~-~d~~~~S~~k~K~l~~~- 193 (393)
T 1mdo_A 127 QTKAIIPVHYA---GAPADLDAIYALGERYGIPVIEDAAHATGTSYKGR------HIG--A-RGTAIFSFHAIKNITCA- 193 (393)
T ss_dssp TEEEECCBCGG---GCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTE------ETT--S-SSEEEEECCTTSSSCSS-
T ss_pred CceEEEEeCCC---CCcCCHHHHHHHHHHcCCeEEEECccccCCeECCe------ecC--C-CCeEEEeCCCCCccccc-
Confidence 57888888754 4455545555555554 444 3322222 233 3 8999887 999877
Q ss_pred ccccceec-HHHHHhhhcC---Cc--------------cc-----ccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q psy6205 158 PVAAVITT-KEIAKSFQET---GV--------------EY-----FNTYGGNPVSCAVANAVMEVLETENLREHALDVGN 214 (224)
Q Consensus 158 p~~av~~~-~~i~~~~~~~---~~--------------~~-----~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~ 214 (224)
..|+++++ +++.+.+... +. .+ +..+..+++.++++++.++.++ ++.++.+++.+
T Consensus 194 ~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~--~~~~~~~~~~~ 271 (393)
T 1mdo_A 194 EGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLD--ALNARRAAIAA 271 (393)
T ss_dssp SCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHH
T ss_pred cceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 46778886 7887766431 10 00 0114468999999888887764 46778888999
Q ss_pred HHHHhhhhc
Q psy6205 215 QLHTPKKEN 223 (224)
Q Consensus 215 ~l~~~l~~l 223 (224)
+|.+.|+++
T Consensus 272 ~l~~~L~~~ 280 (393)
T 1mdo_A 272 QYHQAMADL 280 (393)
T ss_dssp HHHHHHHTS
T ss_pred HHHHHHhcC
Confidence 999998765
No 179
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=97.51 E-value=0.0002 Score=63.64 Aligned_cols=118 Identities=14% Similarity=0.056 Sum_probs=75.3
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchh--cccccccC--Cc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN--GH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~--G~ 157 (224)
+++.+|+++......|.+.+.++..+.+++. ++. +|. .+..-.+ .+|++ +++|.+++ |+
T Consensus 216 ~~tk~v~l~~p~NptG~v~~l~~i~~la~~~gi~livDea~~----~g~-~~~~~~~----~~div~~S~sK~~~g~~Gl 286 (464)
T 1ibj_A 216 PQTKLVWLESPTNPRQQISDIRKISEMAHAQGALVLVDNSIM----SPV-LSRPLEL----GADIVMHSATKFIAGHSDV 286 (464)
T ss_dssp SSEEEEEECSSCTTTCCCCCHHHHHHHHHTTTCEEEEECTTT----CTT-TCCGGGT----TCSEEEEETTTTTTCSSCC
T ss_pred cCceEEEEeCCCCCCCEeecHHHHHHHHHHcCCEEEEECCCc----ccc-cCChhhc----CCEEEEECCcccccCCCCC
Confidence 4688999999998889888644444444444 432 222 1111113 36887 59999986 78
Q ss_pred ccccceec-HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh--hhhHHHHHHHHHHHHHH
Q psy6205 158 PVAAVITT-KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE--TENLREHALDVGNQLHT 218 (224)
Q Consensus 158 p~~av~~~-~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~--~~~l~~~~~~~g~~l~~ 218 (224)
++|+++++ +++.+.+... ........+|+++.+++++|+.+. -+...+++..+.+++++
T Consensus 287 ~~G~l~~~~~~l~~~l~~~--~~~~g~~~~~~~~~a~~~al~~~~~r~~~~~~~~~~l~~~l~~ 348 (464)
T 1ibj_A 287 MAGVLAVKGEKLAKEVYFL--QNSEGSGLAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSS 348 (464)
T ss_dssp CCEEEEECSHHHHHHHHHH--HHHTTCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred cEEEEEEChHHHHHHHHHH--HHhcCCCCCHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHh
Confidence 89999998 5787777532 111234457888888888876543 23345566666666654
No 180
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=97.49 E-value=0.00038 Score=61.14 Aligned_cols=142 Identities=10% Similarity=0.099 Sum_probs=80.6
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccc--cchhhhhcCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGT--HWWAFQLQGD 140 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~--~~~~~~~~g~ 140 (224)
+++|++.++. .+.+...+++.......|.+ .+.+.++++.++ +..+|+..+. ..+....+.
T Consensus 189 ~e~l~~~l~~---~~~~~~~v~~~~p~NPtG~~-~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~- 263 (448)
T 3meb_A 189 FSNTKKDIQS---APEKSIFLFHACAHNPSGID-FTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFV- 263 (448)
T ss_dssp HHHHHHHHHH---SCTTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHH-
T ss_pred HHHHHHHHHh---CCCCcEEEEeCCCCCCCCcC-CCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHh-
Confidence 4556555542 33344455544445556765 455555666655 6667765441 123333331
Q ss_pred CCCCc---hhccccccc-CCcccccc--ee---------cH----HHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh
Q psy6205 141 DIIPD---IVTVGKPMG-NGHPVAAV--IT---------TK----EIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE 201 (224)
Q Consensus 141 ~v~pD---i~~~~K~l~-~G~p~~av--~~---------~~----~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~ 201 (224)
+..++ +.+++|.+| .|+.+|++ ++ ++ ++.+.+... ....+...++++.+++.+.|+.-+
T Consensus 264 ~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~~~~~~~~~~a~~~~l~~~~ 341 (448)
T 3meb_A 264 DAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQ--IRKTWSMSAIHGAYIVQVIVHDKR 341 (448)
T ss_dssp HTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHH--HHTTTSSCCHHHHHHHHHHHTSHH
T ss_pred hcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHH--HhcccCCccHHHHHHHHHHhcChH
Confidence 13356 447899998 58999997 55 45 555544321 112344556677777776664321
Q ss_pred --------hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 202 --------TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 202 --------~~~l~~~~~~~g~~l~~~l~~l 223 (224)
-+...++++++-++|.+.|+++
T Consensus 342 l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 371 (448)
T 3meb_A 342 LLQMFYDNVKEMSARIHRMRSLLHASLAKR 371 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 1356677788888888888765
No 181
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=97.43 E-value=9.7e-05 Score=65.57 Aligned_cols=77 Identities=21% Similarity=0.210 Sum_probs=45.4
Q ss_pred CCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecC---CCccccCCCCCCCCCChhHHHHHHHHHHH
Q psy6205 4 YPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAP---CPDVYRGKYPADKYPDEDLGVKYAQDVQD 80 (224)
Q Consensus 4 ~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp---~P~~yr~~~~~~~~~~~~~~~~~~~~l~~ 80 (224)
||.|+||||+|||+||||+.+ +++.|....+..+...++..+.+..+ ..+..|...+-.. +++..++.++-|++
T Consensus 374 ~~~v~~VRG~Gl~~giel~~~-~~~~~~~~~~~~v~~~~~~~Gvl~~~~g~~~~~irl~PpL~i--t~~~id~~l~~l~~ 450 (456)
T 4atq_A 374 GSVVGDIRGRGAMLAIELVQP-GSKEPNAELTKAVAAACLKEGVIILTCGTYGNVIRLLPPLVI--SDELLIDGLEVLAA 450 (456)
T ss_dssp --CEEEEEEETTEEEEEEBCT-TSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTC--CHHHHHHHHHHHHH
T ss_pred CCceEEeeecceEEEEEEecC-CCCCcCHHHHHHHHHHHHHCCCEEEecCCCCCEEEEECCCCC--CHHHHHHHHHHHHH
Confidence 689999999999999999865 35556555555555554444443332 2233332222111 25667777777777
Q ss_pred HHH
Q psy6205 81 LIE 83 (224)
Q Consensus 81 ~~~ 83 (224)
.++
T Consensus 451 al~ 453 (456)
T 4atq_A 451 AIK 453 (456)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 182
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=97.41 E-value=0.00036 Score=60.36 Aligned_cols=118 Identities=13% Similarity=0.016 Sum_probs=73.6
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccccchhhhhcCCCCCCchh--cccccccC
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN 155 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~ 155 (224)
+++.+|++|.+....|.+.+.++..+.+++. +++.+.+ .. .+ . ..+|++ +++|.+|+
T Consensus 137 ~~t~lv~~~~~~nptG~~~~l~~i~~la~~~~~~~~~~livD~a~~~~~~-~~-~~---~----~~~di~~~S~sK~~g~ 207 (393)
T 1n8p_A 137 ENTKLVWIETPTNPTLKVTDIQKVADLIKKHAAGQDVILVVDNTFLSPYI-SN-PL---N----FGADIVVHSATKYING 207 (393)
T ss_dssp SSEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTTTTCEEEEECTTTHHHH-CC-GG---G----GTCSEEEEETTTTTTC
T ss_pred cCceEEEEECCCCCcceecCHHHHHHHHHHhCCCCCCEEEEeCCcccccc-CC-HH---H----cCCeEEEEECcccccC
Confidence 3678999999999999988755555555441 3332221 11 11 1 237877 69999996
Q ss_pred -Cccc-ccceec-HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHH
Q psy6205 156 -GHPV-AAVITT-KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHT 218 (224)
Q Consensus 156 -G~p~-~av~~~-~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~ 218 (224)
|+++ |+++++ +++.+.+.... .......+|..++++.+.++.+.+ +...++++.+.++|.+
T Consensus 208 ~G~rigG~~~~~~~~~~~~l~~~~--~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~ 273 (393)
T 1n8p_A 208 HSDVVLGVLATNNKPLYERLQFLQ--NAIGAIPSPFDAWLTHRGLKTLHLRVRQAALSANKIAEFLAA 273 (393)
T ss_dssp SSCCCCEEEEESCHHHHHHHHHHH--HHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTS
T ss_pred CCCceeEEEEeCCHHHHHHHHHHH--HhcCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh
Confidence 6788 778775 78888775431 112234478888888888876632 3344555555555443
No 183
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=97.35 E-value=0.00025 Score=60.59 Aligned_cols=122 Identities=16% Similarity=0.182 Sum_probs=76.6
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhccc--ccccCCccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG--KPMGNGHPV 159 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~--K~l~~G~p~ 159 (224)
++..+|++++.+...|.+.+.++..+.+++. +++ +|.. ...... . +|+++.+ | +.|..++
T Consensus 158 ~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~-~~~~-----~~~~~~--~-~d~~~~s~~K-~~g~~g~ 227 (400)
T 3vax_A 158 PDTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQG-YGKV-----PGDLTT--P-IDMISISGHK-IGAPKGV 227 (400)
T ss_dssp TTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTT-TTTS-----GGGGGS--C-CSEEEEETGG-GTSCSSC
T ss_pred CCceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhh-cCCC-----CcChhh--c-CcEEEEeHHH-hCCCCce
Confidence 3678999999999999887754444444443 322 2111 112222 4 8998766 9 4444457
Q ss_pred ccce-ecHH-HH---HhhhcC----Ccc-cccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhh
Q psy6205 160 AAVI-TTKE-IA---KSFQET----GVE-YFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 160 ~av~-~~~~-i~---~~~~~~----~~~-~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~ 221 (224)
|+++ ++++ +. +.+... ... ...+.+.++.++++..++++.+++ +++.++.+++.++|.+.|+
T Consensus 228 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~ 301 (400)
T 3vax_A 228 GALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLLAGLA 301 (400)
T ss_dssp EEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhC
Confidence 8888 7761 11 111111 000 123555688888888899998865 6788889999999998886
No 184
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=97.34 E-value=0.00034 Score=61.63 Aligned_cols=123 Identities=10% Similarity=-0.025 Sum_probs=78.3
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhccc--ccccCCcccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG--KPMGNGHPVA 160 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~--K~l~~G~p~~ 160 (224)
++.+|++.+ +...|.+.+.++..+.+++. ++.++-+.+...+....++ +|+++.+ |.++++.++|
T Consensus 146 ~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~~~g----~Di~~~S~~K~l~~~~g~g 220 (446)
T 2x3l_A 146 GHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQ----ADYVVQSFHKTLPALTMGS 220 (446)
T ss_dssp -CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGGGGT----CSEEEECHHHHSSSCTTCE
T ss_pred CceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChHHcC----CCEEEECCccccccccccE
Confidence 467788887 66688888766666666665 4443111111012222333 7988766 9988777789
Q ss_pred cceecHHHHH--hhhcCCcccccCCCCcHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHh
Q psy6205 161 AVITTKEIAK--SFQETGVEYFNTYGGNPVSCAVANAVMEVLETE---NLREHALDVGNQLHTP 219 (224)
Q Consensus 161 av~~~~~i~~--~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~---~l~~~~~~~g~~l~~~ 219 (224)
++++++++.+ .+... .....|.+.+...+++..++++.+++. ++.++.+++.++++++
T Consensus 221 ~l~~~~~~i~~~~~~~~-~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~ 283 (446)
T 2x3l_A 221 VLYIHKNAPYRENIIEY-LSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK 283 (446)
T ss_dssp EEEEETTCTTHHHHHHH-HHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCcCCHHHHHHH-HHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc
Confidence 9999887654 22221 122345566788888877888888653 3889999999888764
No 185
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=97.32 E-value=0.0004 Score=60.27 Aligned_cols=119 Identities=13% Similarity=0.124 Sum_probs=76.3
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHh-CCccccccchhhhhcCCCCCCchhccc----ccccCCc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQV-GFGRVGTHWWAFQLQGDDIIPDIVTVG----KPMGNGH 157 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~t-G~GrtG~~~~~~~~~g~~v~pDi~~~~----K~l~~G~ 157 (224)
++.+|++... .|...+-++..+.+++. +++ |+...|. . ++ ..+|+++.+ |++++ .
T Consensus 138 ~~~~v~~~~~---tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~-~-----~~--~~~di~~~S~sk~K~l~~-~ 205 (424)
T 2po3_A 138 RTSAVVGVHL---WGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGR-P-----AG--SLGDAEVFSFHATKAVNA-F 205 (424)
T ss_dssp TEEEEEEECG---GGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE-E-----TT--SSSSEEEEECCTTSSSCC-S
T ss_pred CCcEEEEECC---CCCcCCHHHHHHHHHHcCCEEEEECccccCCeECCe-e-----cc--cccCEEEEeCCCCCCccC-C
Confidence 5677776542 34444444555555554 666 6654443 1 22 336888776 99987 4
Q ss_pred ccccceec-HHHHHhhhcC---Cc-------ccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITT-KEIAKSFQET---GV-------EYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~-~~i~~~~~~~---~~-------~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
.+|+++++ +++++.+... .. .++.++..+++++++++..++.++ .+.++.+++.++|.+.|+++
T Consensus 206 ~~G~~v~~~~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~~~~~~--~~~~~~~~~~~~l~~~L~~~ 280 (424)
T 2po3_A 206 EGGAVVTDDADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTSLDAFP--EVIDRNRRNHAAYREHLADL 280 (424)
T ss_dssp SCEEEEESCHHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHTCSC
T ss_pred CCeEEEeCCHHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccC
Confidence 67889998 8887766421 10 011233456889998888777664 37888889999999988764
No 186
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=97.32 E-value=0.0011 Score=56.30 Aligned_cols=120 Identities=18% Similarity=0.172 Sum_probs=78.1
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhccc----ccccC-Cc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG----KPMGN-GH 157 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~----K~l~~-G~ 157 (224)
++.+|++.. ..|...+.++..+.+++. +++ + |. .+..+.++ ..+|++++| |.+++ |.
T Consensus 124 ~~~~v~~~n---~~G~~~~l~~i~~l~~~~~~~li~D~a~~-~---g~-~~~~~~~~--~~~d~~~~S~~~~K~l~~~g~ 193 (373)
T 3frk_A 124 KTKAIIAVH---LYGQPADMDEIKRIAKKYNLKLIEDAAQA-H---GS-LYKGMKVG--SLGDAAGFSFYPAKNLGSLGD 193 (373)
T ss_dssp TEEEEEEEC---CTTCCCCHHHHHHHHHHHTCEEEEECTTC-T---TC-EETTEETT--SSSSEEEEECCTTSSSCCSSS
T ss_pred CCeEEEEEC---CCcCcccHHHHHHHHHHcCCEEEEECCcc-c---CC-EECCEecc--ccccEEEEeCcCCCccCccce
Confidence 567777433 456666666666666665 443 1 22 22333454 668999988 99987 64
Q ss_pred ccccceec-HHHHHhhhc---CC-------cccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITT-KEIAKSFQE---TG-------VEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~-~~i~~~~~~---~~-------~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
.|+++++ +++.+.+.. .+ ...+.++..+++.+|++++.++.++ .+.++.+++.+++.+.|+++
T Consensus 194 -gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~ 267 (373)
T 3frk_A 194 -GGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLKYLD--KWNEERRKIAQKYIAGINNP 267 (373)
T ss_dssp -CEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHHTHH--HHHHHHHHHHHHHHHHCCCT
T ss_pred -eEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccC
Confidence 5666665 456555432 11 0123566779999999888877664 47888999999999998765
No 187
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=97.31 E-value=0.00086 Score=56.16 Aligned_cols=128 Identities=15% Similarity=0.176 Sum_probs=68.7
Q ss_pred CceEEEEccccCCC-CcccCCHHHHHHHHHH-HHhCCc-cc-ccc-chhhhhcCCC-----CCCc--hhcccccccCCcc
Q psy6205 91 RPCAFFAESLQSCG-GQIIPPANYLREVYKH-VQVGFG-RV-GTH-WWAFQLQGDD-----IIPD--IVTVGKPMGNGHP 158 (224)
Q Consensus 91 ~iaavi~Epv~~~~-G~~~~~~~~l~~~~~~-v~tG~G-rt-G~~-~~~~~~~g~~-----v~pD--i~~~~K~l~~G~p 158 (224)
++.+|++++.+... |.+ .+.+.++++.++ -+.|.= -. +.. +++....+.. ...| +++++|.+++ |
T Consensus 132 ~~~~v~~~~~~npt~G~~-~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~l~~--~ 208 (347)
T 1jg8_A 132 RTSLIAIENTHNRSGGRV-VPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYADSVMFCLSKGLCA--P 208 (347)
T ss_dssp CEEEEEEESSBTTTTSBC-CCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCSEEEEESSSTTCC--S
T ss_pred CceEEEEeccccccCCcc-CcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcccccEEEEecccccCC--C
Confidence 67899999988876 754 455556655555 111100 00 000 0011111100 1123 3459999975 4
Q ss_pred ccc-ceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 159 VAA-VITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 159 ~~a-v~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+|+ +++++++.+.+......+.+++..+++.++++.+.|+...+ . .++..+..+++.+.|+++
T Consensus 209 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~-~~~~~~~~~~l~~~L~~~ 272 (347)
T 1jg8_A 209 VGSVVVGDRDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMVD-R-LKEDHENARFLALKLKEI 272 (347)
T ss_dssp SCEEEEECHHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSST-T-HHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcCHHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHHhc
Confidence 674 56788887765421112334555677888888888876533 2 233445567777777653
No 188
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=97.28 E-value=0.00029 Score=60.40 Aligned_cols=123 Identities=13% Similarity=0.019 Sum_probs=72.2
Q ss_pred CCceE-EEEccccCCCCcccCCHHHHHHHHHH-HHhCC-----ccccccch---hhh--hcCCCCCCchhc--ccccccC
Q psy6205 90 KRPCA-FFAESLQSCGGQIIPPANYLREVYKH-VQVGF-----GRVGTHWW---AFQ--LQGDDIIPDIVT--VGKPMGN 155 (224)
Q Consensus 90 ~~iaa-vi~Epv~~~~G~~~~~~~~l~~~~~~-v~tG~-----GrtG~~~~---~~~--~~g~~v~pDi~~--~~K~l~~ 155 (224)
+++.+ |+++.....+|. ....++++.++ -..|. ..+|. ++ ..+ ... ..+|+++ ++|.++|
T Consensus 139 ~~~~~~v~~~~p~nptG~---~~~~l~~i~~l~~~~~~~li~De~~~~-~~~~~~~~~~~~~--~~~di~~~S~sK~l~g 212 (374)
T 2aeu_A 139 DKDTLVIITGSTMDLKVI---ELENFKKVINTAKNKEAIVFVDDASGA-RVRLLFNQPPALK--LGADLVVTSTDKLMEG 212 (374)
T ss_dssp CTTEEEEEECBCTTSCBC---CHHHHHHHHHHHHHHTCCEEEECTTHH-HHHHHTTCCCHHH--HTCSEEEEETTSSSSS
T ss_pred CCccEEEEEccCCCCCCC---CcccHHHHHHHHHHcCCEEEEECCccc-ccccccccCCccc--cCCcEEEecCcccccC
Confidence 46788 999988777774 34455555555 00000 01111 11 001 111 2368875 8999875
Q ss_pred CcccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHH----HHHHHHhhh
Q psy6205 156 GHPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET---ENLREHALDV----GNQLHTPKK 221 (224)
Q Consensus 156 G~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~----g~~l~~~l~ 221 (224)
..+|++++++++++.+... ....+.+.+|++++++.++|+.+.. ..+.++.+.+ -+.|.+.|.
T Consensus 213 -~~~G~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 282 (374)
T 2aeu_A 213 -PRGGLLAGKKELVDKIYIE--GTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELK 282 (374)
T ss_dssp -CSCEEEEEEHHHHHHHHHH--HHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHT
T ss_pred -cceEEEEECHHHHHHHHHh--hccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 6788899999999887642 1112345789999999999998743 2333444444 244555444
No 189
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=97.20 E-value=0.00099 Score=59.03 Aligned_cols=128 Identities=9% Similarity=-0.073 Sum_probs=79.6
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccc-------ccc-chhhhhcCCCCCCchhcc--ccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRV-------GTH-WWAFQLQGDDIIPDIVTV--GKP 152 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~Grt-------G~~-~~~~~~~g~~v~pDi~~~--~K~ 152 (224)
++++|+++......|.+.+.++..+.+++. ++.|+.+. |.. -+.+...| + |++++ .|.
T Consensus 206 ~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~~~~~g--~--d~~~~s~~K~ 281 (497)
T 3mc6_A 206 NTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLDFRVPG--V--TSISCDTHKY 281 (497)
T ss_dssp SEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCSTTSTT--C--CEEEEETTTT
T ss_pred CCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCccccccCCC--C--cEEEECchhh
Confidence 578999999888889998888777777776 44444332 110 13333444 3 66654 488
Q ss_pred ccCCcccccceecHHHHHhhhcCC-cc-c-----ccCCC--CcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHhh
Q psy6205 153 MGNGHPVAAVITTKEIAKSFQETG-VE-Y-----FNTYG--GNPVSCAVANAVMEVLET---ENLREHALDVGNQLHTPK 220 (224)
Q Consensus 153 l~~G~p~~av~~~~~i~~~~~~~~-~~-~-----~~T~~--~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~~~l 220 (224)
+.++.++|+++++++.+....... .. . ..++. .+....++..++++.+.+ +++.+++.++.+++.+.|
T Consensus 282 l~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L 361 (497)
T 3mc6_A 282 GFAPKGSSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYI 361 (497)
T ss_dssp TCCCSSCEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 877888999999887765442110 00 0 01111 122334455556666644 356778888999999999
Q ss_pred hh
Q psy6205 221 KE 222 (224)
Q Consensus 221 ~~ 222 (224)
++
T Consensus 362 ~~ 363 (497)
T 3mc6_A 362 QE 363 (497)
T ss_dssp HH
T ss_pred Hh
Confidence 87
No 190
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=97.15 E-value=0.00071 Score=58.68 Aligned_cols=119 Identities=14% Similarity=0.122 Sum_probs=75.4
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH---------HHhCCccccccchhhhhcCCCCCCchh--cccccccC-C-
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH---------VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN-G- 156 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~---------v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~-G- 156 (224)
+++.+|++|......|.+.+.++..+.+++. ++..+ .. ...+. ..+|++ +++|.++| |
T Consensus 150 ~~t~~v~~~~p~nptG~~~~l~~i~~la~~~g~~~livD~~~~~~-~~------~~~~~--~~~div~~S~sK~~~g~~~ 220 (403)
T 3cog_A 150 PETKLVWIETPTNPTQKVIDIEGCAHIVHKHGDIILVVDNTFMSP-YF------QRPLA--LGADISMYSATKYMNGHSD 220 (403)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHTSSSCCEEEEECTTTCT-TT------CCTTT--TTCSEEEEETTTTTTCSSC
T ss_pred cCCeEEEEECCCCCCCeeeCHHHHHHHHHHcCCCEEEEECCCccc-cc------CCccc--cCCeEEEEcChhhccCCCC
Confidence 3678999999998889888633333333221 22111 00 11222 457888 68999985 4
Q ss_pred cccccceec-HHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHh
Q psy6205 157 HPVAAVITT-KEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTP 219 (224)
Q Consensus 157 ~p~~av~~~-~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~ 219 (224)
..+|+++++ +++.+.+... ....+...+|+.++++++.|+.+.. +...+++..+.+++.+.
T Consensus 221 ~~~G~v~~~~~~l~~~l~~~--~~~~g~~~~~~~~~~~~~~l~~l~~r~~~~~~n~~~l~~~l~~~ 284 (403)
T 3cog_A 221 VVMGLVSVNCESLHNRLRFL--QNSLGAVPSPIDCYLCNRGLKTLHVRMEKHFKNGMAVAQFLESN 284 (403)
T ss_dssp CCCEEEEECCHHHHHHHHHH--HHHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CeEEEEEECcHHHHHHHHHH--HHhcCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 578999984 7888877542 2234566789999998888877632 44555666666666543
No 191
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=97.13 E-value=0.001 Score=56.35 Aligned_cols=120 Identities=18% Similarity=0.214 Sum_probs=75.5
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhccc----ccccC-Cc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG----KPMGN-GH 157 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~----K~l~~-G~ 157 (224)
++.+|+ |. ...|.+.+.++..+.+++. +++ .|. .+..+..+ ..+|+++++ |.+++ |.
T Consensus 125 ~~~~v~--~~-n~~G~~~~~~~i~~~~~~~~~~li~D~~~~----~g~-~~~~~~~~--~~~d~~~~s~~~~K~l~~~g~ 194 (374)
T 3uwc_A 125 KTKAIM--PV-HYTGNIADMPALAKIAKKHNLHIVEDACQT----ILG-RINDKFVG--SWGQFACFSLHPLKNLNVWSD 194 (374)
T ss_dssp TEEEEC--CB-CGGGCCCCHHHHHHHHHHTTCEEEEECTTC----TTC-EETTEETT--SSSSEEEEECSSSSSSCCSSC
T ss_pred CceEEE--Ee-CCcCCcCCHHHHHHHHHHcCCEEEEeCCCc----cCc-eeCCeecc--ccccEEEEeCCCCCcCCccce
Confidence 556666 33 2456666555555555554 433 222 23344555 668999988 99988 75
Q ss_pred ccccceec-HHHHHhhhcC---C-------cccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITT-KEIAKSFQET---G-------VEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~-~~i~~~~~~~---~-------~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
.|+++++ +++.+.+... + .....++..+++.++++++.++.++ ++.++.+++.+++.+.|+++
T Consensus 195 -~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~ 268 (374)
T 3uwc_A 195 -AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMNQLE--TITEKRRGIAHLYDQSFVDL 268 (374)
T ss_dssp -CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGGGHH--HHHHHHHHHHHHHHHHTGGG
T ss_pred -eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhccC
Confidence 6667765 4665554321 1 0123455678888888887776664 47888999999999998865
No 192
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=97.05 E-value=0.0024 Score=53.39 Aligned_cols=122 Identities=11% Similarity=0.032 Sum_probs=69.2
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCc--cccccchhhhhcCCCCCCchhc--cccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFG--RVGTHWWAFQLQGDDIIPDIVT--VGKPMG 154 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~G--rtG~~~~~~~~~g~~v~pDi~~--~~K~l~ 154 (224)
++++|++++.. +.|. ..+.++++++.++ ++..+. ..|. ....++.....|+++ ++|.
T Consensus 141 ~~~~v~~~~~~-~tG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~---~~~~~~~~~~~d~~~~s~sK~-- 213 (356)
T 1v72_A 141 QPACVSITQAT-EVGS-IYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGC---SPAEMTWKAGVDALSFGATKN-- 213 (356)
T ss_dssp EEEEEEEESSC-TTSC-CCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTC---CTTTTTGGGTCCEEEECCGGG--
T ss_pred CceEEEEEcCC-CCCc-cCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCC---CHHHhhhhhcCCEEEEecccC--
Confidence 68999999954 5775 4678899999888 221110 0010 000010001245544 6787
Q ss_pred CCcccc--cceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHhhhhc
Q psy6205 155 NGHPVA--AVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETE---NLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 155 ~G~p~~--av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~---~l~~~~~~~g~~l~~~l~~l 223 (224)
|.|+| ++++++++++.+.... .+.++.... +..++.++++.++++ ++.++.+++.++|.+.|+++
T Consensus 214 -g~~~G~g~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~ 283 (356)
T 1v72_A 214 -GVLAAEAIVLFNTSLATEMSYRR-KRAGHLSSK--MRFLSAQIDAYLTDDLWLRNARKANAAAQRLAQGLEGL 283 (356)
T ss_dssp -TCSSCEEEEESSGGGHHHHHHHH-HHTTCCCSS--THHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred -CCcCccEEEEECHHHHhhHHHHh-hccCchhhh--HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhC
Confidence 34887 6667888887764310 111222211 223444566666553 46778889999999998763
No 193
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=97.04 E-value=0.0058 Score=54.40 Aligned_cols=143 Identities=15% Similarity=0.133 Sum_probs=84.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCcccc-ccchhh----hh
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVG-THWWAF----QL 137 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG-~~~~~~----~~ 137 (224)
+++|++.++.....+.++.+|++.-.....|.+.+ .+-++++.++ +...+...+ ..+..+ ..
T Consensus 221 ~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s-~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~ 299 (500)
T 3tcm_A 221 TSDVKKQLEDARSRGINVRALVVINPGNPTGQVLA-EENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRS 299 (500)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCC-HHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCC-HHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHH
Confidence 45666666543223335666665543444665544 4456665554 444431111 101111 12
Q ss_pred cCCCC-CCc---hh--cccccc-c-CCccccccee---cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHH--------
Q psy6205 138 QGDDI-IPD---IV--TVGKPM-G-NGHPVAAVIT---TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVME-------- 198 (224)
Q Consensus 138 ~g~~v-~pD---i~--~~~K~l-~-~G~p~~av~~---~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~-------- 198 (224)
++ . ..| ++ ++||++ | .|+.+|++++ ++++++.+... ...++..++.+.+++.++|+
T Consensus 300 ~~--~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 374 (500)
T 3tcm_A 300 LG--YGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKI---ASVNLCSNITGQILASLVMNPPKASDES 374 (500)
T ss_dssp TT--CSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHH---HHTTCCCCHHHHHHHHHHHSCCCSSSTH
T ss_pred hc--cccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHH---HhcccCCCHHHHHHHHHHhcCccccchh
Confidence 32 1 222 33 789999 4 4889999998 88998887642 22455667888888877775
Q ss_pred ---HHh-hhhHHHHHHHHHHHHHHhhhhc
Q psy6205 199 ---VLE-TENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 199 ---~~~-~~~l~~~~~~~g~~l~~~l~~l 223 (224)
..+ .+.+.++++++.++|.+.|+++
T Consensus 375 ~~~~~~~~~~~~~~l~~~~~~l~~~L~~~ 403 (500)
T 3tcm_A 375 YASYKAEKDGILASLARRAKALEHAFNKL 403 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 332 3567788888899999988765
No 194
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=96.99 E-value=0.0027 Score=55.30 Aligned_cols=39 Identities=15% Similarity=0.042 Sum_probs=31.2
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 183 YGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 183 ~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+..++++++++++.|+.+ ++..++.+++.+++.++|+++
T Consensus 289 ~~~~~~~aa~~l~~l~~~--~~~~~~~~~~~~~l~~~L~~~ 327 (437)
T 3bb8_A 289 LKITDMQAACGLAQLERI--EEFVEKRKANFKYLKDALQSC 327 (437)
T ss_dssp CCCBHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHGGGG
T ss_pred cCCCHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcc
Confidence 345699999999998877 446677788899999999865
No 195
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=96.96 E-value=0.0012 Score=59.55 Aligned_cols=73 Identities=11% Similarity=-0.019 Sum_probs=44.3
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-------------HHhCCccccccchhhhhcCCCCCCchhccccccc-CC
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMG-NG 156 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~-~G 156 (224)
++.+|++.......|.+.+ .+.++++.++ ++.+|...+. .......+ ....+.+++|.+| .|
T Consensus 244 ~~k~v~l~~p~NPtG~~~~-~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~-~~~~~~~~--~~i~~~S~SK~~g~~G 319 (533)
T 3f6t_A 244 SIKALIVVNPTNPTSKEFD-TNALNAIKQAVEKNPKLMIISDEVYGAFVPNFK-SIYSVVPY--NTMLVYSYSKLFGCTG 319 (533)
T ss_dssp TEEEEEEESSCTTTCBCCC-HHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCC-CHHHHSGG--GEEEEEESHHHHTCGG
T ss_pred CCeEEEEeCCCCCCccccC-HHHHHHHHHHHHhCCCCEEEEcCCccccccCcc-CHhhcCCC--CEEEEecCcccCCCcc
Confidence 5667777644555776654 4445555443 5555644332 11111122 4455678999998 68
Q ss_pred cccccceecHH
Q psy6205 157 HPVAAVITTKE 167 (224)
Q Consensus 157 ~p~~av~~~~~ 167 (224)
+.+|+++++++
T Consensus 320 ~RiG~l~~~~~ 330 (533)
T 3f6t_A 320 WRLGVIALNEK 330 (533)
T ss_dssp GCEEEEEEESS
T ss_pred cceEEEEECcH
Confidence 99999999877
No 196
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=96.93 E-value=0.002 Score=55.06 Aligned_cols=84 Identities=13% Similarity=0.018 Sum_probs=56.3
Q ss_pred hhcCCCCCCchhcccccccCCc--c-cccceecH-HHHHhhh---cCC--cc------------------------cccC
Q psy6205 136 QLQGDDIIPDIVTVGKPMGNGH--P-VAAVITTK-EIAKSFQ---ETG--VE------------------------YFNT 182 (224)
Q Consensus 136 ~~~g~~v~pDi~~~~K~l~~G~--p-~~av~~~~-~i~~~~~---~~~--~~------------------------~~~T 182 (224)
+.+| +.+|+.+++|..+.++ + .|++++++ ++.+.+. ..+ .. .+.+
T Consensus 173 ~~~g--~~~~~~~~s~~~~k~~~~g~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 250 (390)
T 3b8x_A 173 KCAG--TFGLMGTFSSFYSNHIATMEGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYN 250 (390)
T ss_dssp EETT--SSSSEEEEECCTTSSSCSSSCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCB
T ss_pred cccc--cccceEEEEccCCCCCccCCceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccc
Confidence 4556 7889999886554332 2 35566664 6655432 111 00 1234
Q ss_pred CCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 183 YGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 183 ~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
+..+++.++++++.|+.++ +..++.+++.+++.+.|+++
T Consensus 251 ~~~~~~~aa~~l~~l~~l~--~~~~~~~~~~~~l~~~L~~~ 289 (390)
T 3b8x_A 251 VRPLEMSGAIGIEQLKKLP--RFISVRRKNAEYFLDKFKDH 289 (390)
T ss_dssp CCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHTTC
T ss_pred cCcCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhcCC
Confidence 5588999999999998875 57888899999999998764
No 197
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=96.89 E-value=0.0022 Score=54.61 Aligned_cols=119 Identities=15% Similarity=0.025 Sum_probs=71.8
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHh-CCccccccchhhhhcCCCCCCchhccc----ccccCCc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQV-GFGRVGTHWWAFQLQGDDIIPDIVTVG----KPMGNGH 157 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~t-G~GrtG~~~~~~~~~g~~v~pDi~~~~----K~l~~G~ 157 (224)
++.+|+ |... .|.+.+.++..+.+++. +++ |+...|. . ...+ +|+++++ |.++||
T Consensus 126 ~~~~v~--~~n~-tG~~~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~-~--~~~~-----~~i~~~S~s~~K~l~g~- 193 (388)
T 1b9h_A 126 RTKVIM--PVHM-AGLMADMDALAKISADTGVPLLQDAAHAHGARWQGK-R--VGEL-----DSIATFSFQNGKLMTAG- 193 (388)
T ss_dssp TEEEEC--CBCG-GGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTE-E--GGGS-----SSCEEEECCTTSSSCSS-
T ss_pred CceEEE--EeCC-ccCcCCHHHHHHHHHHcCCEEEEecchhcCCccCCe-e--cccc-----cceEEEEccCCCcccCC-
Confidence 455655 5443 46666656666666665 443 3322232 1 1122 3666666 999876
Q ss_pred ccccceecHH-H--HHhhhc---CCc----------ccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 158 PVAAVITTKE-I--AKSFQE---TGV----------EYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 158 p~~av~~~~~-i--~~~~~~---~~~----------~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
..|+++++++ + ++.+.. .+. ..+.++..+++.++++++.++.+++ ..++.+++.+++.+.|+
T Consensus 194 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~~--~~~~~~~~~~~l~~~L~ 271 (388)
T 1b9h_A 194 EGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARLDE--QIAVRDERWTLLSRLLG 271 (388)
T ss_dssp SCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHHH--HHHHHHHHHHHHHHHHH
T ss_pred CeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhc
Confidence 4688888875 6 555421 100 0123345788888888887777654 67778888899988887
Q ss_pred hc
Q psy6205 222 EN 223 (224)
Q Consensus 222 ~l 223 (224)
++
T Consensus 272 ~~ 273 (388)
T 1b9h_A 272 AI 273 (388)
T ss_dssp TS
T ss_pred cC
Confidence 64
No 198
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=96.85 E-value=0.0027 Score=54.15 Aligned_cols=121 Identities=18% Similarity=0.156 Sum_probs=74.0
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhccc----ccccCCc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVG----KPMGNGH 157 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~----K~l~~G~ 157 (224)
+++.+|++... .|...+.++..+.+++. +++ .|. .+.....+ ..+|+++++ |++++|.
T Consensus 143 ~~~~~v~~~n~---tG~~~~~~~i~~l~~~~~~~li~D~a~~----~g~-~~~~~~~~--~~~di~~~S~s~~K~l~~g~ 212 (391)
T 3dr4_A 143 PRTKAIMPVHL---YGQICDMDPILEVARRHNLLVIEDAAEA----VGA-TYRGKKSG--SLGDCATFSFFGNAIITTGE 212 (391)
T ss_dssp TTEEEECCBCG---GGCCCCHHHHHHHHHHTTCEEEEECTTC----TTC-EETTEETT--SSSSEEEEECBTTSSSCCBS
T ss_pred CCceEEEEECC---CCChhhHHHHHHHHHHcCCEEEEECccc----ccc-eECCeeec--ccCCEEEEECCCCCcCCcCC
Confidence 35677775543 35555544544444444 333 121 12222333 557999888 9998763
Q ss_pred ccccceec-HHHHHhhhcC---Cc---------ccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhc
Q psy6205 158 PVAAVITT-KEIAKSFQET---GV---------EYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 158 p~~av~~~-~~i~~~~~~~---~~---------~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l 223 (224)
.|+++++ +++.+.+... +. ....++..+++.+|+++..++.+++ +.++.+++.+++++.|+++
T Consensus 213 -gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~~~--~~~~~~~~~~~l~~~L~~~ 288 (391)
T 3dr4_A 213 -GGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERVDE--HLAARERVVGWYEQKLARL 288 (391)
T ss_dssp -CEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHTHHH--HHHHHHHHHHHHHHHHGGG
T ss_pred -eEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHhhcC
Confidence 5666665 5566554321 10 1123477889999888888776644 7888899999999998865
No 199
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=96.84 E-value=0.002 Score=54.12 Aligned_cols=123 Identities=13% Similarity=0.063 Sum_probs=75.5
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH-------HHhCCccccccchhhhhcCCCCCCchhcc--cccccCCcccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDIVTV--GKPMGNGHPVA 160 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~--~K~l~~G~p~~ 160 (224)
++..+|+++..+...|.+.+.++..+.+++. ++ ++|.. .+..+.++ +|++++ +|.+ |+..+|
T Consensus 137 ~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~li~D~a~-~~~~~---~~~~~~~~----~d~~~~s~~K~~-g~~g~g 207 (382)
T 4hvk_A 137 DDTILVSVQHANNEIGTIQPVEEISEVLAGKAALHIDATA-SVGQI---EVDVEKIG----ADMLTISSNDIY-GPKGVG 207 (382)
T ss_dssp TTEEEEECCSBCTTTCBBCCHHHHHHHHSSSSEEEEECTT-TBTTB---CCCHHHHT----CSEEEEESGGGT-SCTTCE
T ss_pred cCceEEEEECCCCCceeeCCHHHHHHHHHHcCEEEEEhHH-hcCCC---CCCchhcC----CCEEEEeHHHhc-CCCceE
Confidence 3568999999999899887744333333332 11 11111 11122223 677765 5954 333578
Q ss_pred cceecHHHHHhhhcCC-----cccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 161 AVITTKEIAKSFQETG-----VEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 161 av~~~~~i~~~~~~~~-----~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
+++++++. .+.... .....+.+.++.++++..++++.+++ +++.++.+++.++|.+.|+++
T Consensus 208 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 275 (382)
T 4hvk_A 208 ALWIRKEA--KLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKI 275 (382)
T ss_dssp EEEEETTC--CCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred EEEEcCcc--CcCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 88887764 222110 01113555688899999899987764 578888999999999998764
No 200
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=96.80 E-value=0.0032 Score=54.93 Aligned_cols=127 Identities=10% Similarity=-0.062 Sum_probs=75.0
Q ss_pred CceEEEEcc----ccCCCCcccCCHHHHHHHHH--H-----HHhCCccccccchhhhhcCCCCCCchh--cccccccCC-
Q psy6205 91 RPCAFFAES----LQSCGGQIIPPANYLREVYK--H-----VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGNG- 156 (224)
Q Consensus 91 ~iaavi~Ep----v~~~~G~~~~~~~~l~~~~~--~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~G- 156 (224)
+..+|++|. .....|.+.+.++..+.+++ . |-.-++ .+. +..+... ...|++ +++|.++|+
T Consensus 159 ~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~-~~~--~~~~p~~--~g~Div~~S~sK~lgg~~ 233 (409)
T 3jzl_A 159 KTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYG-EFV--EYQEPPE--VGADIIAGSLIKNPGGGL 233 (409)
T ss_dssp TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTC-TTT--SSCCSGG--GTCSEEEEETTSGGGTTT
T ss_pred CCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcc-ccc--ccCCccc--cCCeEEEECccccCCccC
Confidence 578999998 77778888777777777777 3 100011 110 0111111 235877 589999875
Q ss_pred cc-cccceecHHHHHhhhcC--CcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhcC
Q psy6205 157 HP-VAAVITTKEIAKSFQET--GVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 157 ~p-~~av~~~~~i~~~~~~~--~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~l~ 224 (224)
-| .|.+++++++.+.+... ......+.+..+..+.+++..|+.+ +...++..+...++.+.|++++
T Consensus 234 ~~~GG~v~~~~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~~~--~~r~~~~~~~a~~la~~L~~~g 302 (409)
T 3jzl_A 234 AKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLA--PHVTAQAIKGARFTAAMLAEFG 302 (409)
T ss_dssp CSSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHTT
T ss_pred CceEEEEEeCHHHHHHHHHHhccccccccccccHHHHHHHHHHHhhH--HHHHHHHHHHHHHHHHHHHhCC
Confidence 34 47788999999988652 1112223333332233444444433 4567777888888888888764
No 201
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=96.78 E-value=0.0053 Score=51.70 Aligned_cols=119 Identities=14% Similarity=0.145 Sum_probs=73.5
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchh--ccc--ccccCCcc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIV--TVG--KPMGNGHP 158 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~--~~~--K~l~~G~p 158 (224)
++.+|++... .|.+.+.++..+.+++. +++ +|... ....++ ..+|++ +++ |.++.|
T Consensus 121 ~~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~-~~~~~----~~~~~~--~~~~i~~~s~s~~K~~~~g-- 188 (375)
T 2fnu_A 121 RTKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHA-LGSEY----QNKKVG--GFALASVFSFHAIKPITTA-- 188 (375)
T ss_dssp TEEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTC-TTCEE----TTEETT--SSSSEEEEECCTTSSSCCS--
T ss_pred CceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccc-cCCeE----CCeecc--ccCCeEEEeCCCCCCcccc--
Confidence 4566555443 57777666666666665 443 32221 112233 335655 677 999654
Q ss_pred cccceec--HHHHHhhhcC---Cc-----------ccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhh
Q psy6205 159 VAAVITT--KEIAKSFQET---GV-----------EYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 159 ~~av~~~--~~i~~~~~~~---~~-----------~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~~ 222 (224)
+|+++++ +++++.+... +. ....++..+++.+++++..++.++ ++.++.+++.++|.+.|++
T Consensus 189 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~--~~~~~~~~~~~~l~~~L~~ 266 (375)
T 2fnu_A 189 EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKAP--FLMQKREEAALTYDRIFKD 266 (375)
T ss_dssp SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTHH--HHHHHHHHHHHHHHHHHTT
T ss_pred CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhhc
Confidence 6777774 7787665431 10 012345778998888887766553 5788889999999999986
Q ss_pred c
Q psy6205 223 N 223 (224)
Q Consensus 223 l 223 (224)
+
T Consensus 267 ~ 267 (375)
T 2fnu_A 267 N 267 (375)
T ss_dssp C
T ss_pred C
Confidence 4
No 202
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=96.53 E-value=0.018 Score=49.14 Aligned_cols=133 Identities=16% Similarity=0.169 Sum_probs=69.6
Q ss_pred CCCceEEEEccccCCCCcccCCHHHHHHHHHH------------HHhCCccccc--cchhhhhcCCCCCCch---hcccc
Q psy6205 89 GKRPCAFFAESLQSCGGQIIPPANYLREVYKH------------VQVGFGRVGT--HWWAFQLQGDDIIPDI---VTVGK 151 (224)
Q Consensus 89 ~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG~--~~~~~~~~g~~v~pDi---~~~~K 151 (224)
..+..++++...+...|.+ .+.+.++++.++ +..+|+..+. ..+....+. +..+++ .+++|
T Consensus 173 ~~~~~~v~i~~p~NPtG~~-~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~sK 250 (401)
T 7aat_A 173 PEKSIILLHACAHNPTGVD-PRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFI-EQGIDVVLSQSYAK 250 (401)
T ss_dssp CTTCEEEEESSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHH-HTTCCCEEEEECTT
T ss_pred CCCcEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHH-hcCCcEEEEecCCc
Confidence 3456777777766667764 455556666555 4444543321 012222220 133454 47999
Q ss_pred ccc-CCccccccee---cHHHHHhhhcCC-c-ccccCCCCcHHHHHHHHHHHHH-------Hh-hhhHHHHHHHHHHHHH
Q psy6205 152 PMG-NGHPVAAVIT---TKEIAKSFQETG-V-EYFNTYGGNPVSCAVANAVMEV-------LE-TENLREHALDVGNQLH 217 (224)
Q Consensus 152 ~l~-~G~p~~av~~---~~~i~~~~~~~~-~-~~~~T~~~~p~~~aaa~a~l~~-------~~-~~~l~~~~~~~g~~l~ 217 (224)
.+| .|+.+|++++ +++..+.+.... . ....+.+.+..+.+++.+.++. .+ -+...++++++-++|.
T Consensus 251 ~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~ 330 (401)
T 7aat_A 251 NMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMADRIISMRTQLV 330 (401)
T ss_dssp TSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998 6888898775 666433332110 0 1112223334444444434421 11 2345667777888888
Q ss_pred Hhhhhc
Q psy6205 218 TPKKEN 223 (224)
Q Consensus 218 ~~l~~l 223 (224)
+.|+++
T Consensus 331 ~~L~~~ 336 (401)
T 7aat_A 331 SNLKKE 336 (401)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 888765
No 203
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=96.52 E-value=0.0047 Score=52.08 Aligned_cols=124 Identities=13% Similarity=0.062 Sum_probs=73.2
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH-------HHhCCccccccchhhhhcCCCCCCchhcc--cccccCCccccc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH-------VQVGFGRVGTHWWAFQLQGDDIIPDIVTV--GKPMGNGHPVAA 161 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~--~K~l~~G~p~~a 161 (224)
++.+|+++..+...|.+.+.++..+.+++. ++. +|... +....+ .+|+++. +|.+|- ..+|+
T Consensus 138 ~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~i~D~a~~-~g~~~---~~~~~~----~~di~~~s~sK~~g~-~g~G~ 208 (382)
T 4eb5_A 138 DTILVSVQHANNEIGTIQPVEEISEVLAGKAALHIDATAS-VGQIE---VDVEKI----GADMLTISSNDIYGP-KGVGA 208 (382)
T ss_dssp TEEEEECCSBCTTTCBBCCHHHHHHHHTTSSEEEEECTTT-BTTBC---CCHHHH----TCSEEEEETGGGTCC-SSCEE
T ss_pred CCeEEEEeccCCCccccCCHHHHHHHHHHCCCEEEEcchh-cCCcc---cCcccc----CCCEEEeehHHhcCC-CceEE
Confidence 577899999998889887744443333332 211 22111 111122 3687754 696431 12688
Q ss_pred ceecHHH-HHhhhcCC-c-ccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHhhhhc
Q psy6205 162 VITTKEI-AKSFQETG-V-EYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 162 v~~~~~i-~~~~~~~~-~-~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~~l~~l 223 (224)
++++++. +..+.... . ....+++.++.+++++.++|+.+++ +.+.++.+++.+++.+.|+++
T Consensus 209 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 275 (382)
T 4eb5_A 209 LWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKI 275 (382)
T ss_dssp EEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred EEEccccccCceecCCCccccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhC
Confidence 8888763 11111000 0 1123345677788888888988765 467788889999999998764
No 204
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=96.39 E-value=0.0035 Score=58.55 Aligned_cols=140 Identities=7% Similarity=0.047 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHccCCCC---ceEEEEccccCCCCcccCCHHHHHHHHHH------H-HhCCccccccchh-hhhcCCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKR---PCAFFAESLQSCGGQIIPPANYLREVYKH------V-QVGFGRVGTHWWA-FQLQGDDII 143 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~---iaavi~Epv~~~~G~~~~~~~~l~~~~~~------v-~tG~GrtG~~~~~-~~~~g~~v~ 143 (224)
.++|++.++. +++. .+.|++.| ...|.+.+.++..+.+++. . ..|+ ..+. .+. ......+..
T Consensus 282 ~e~Le~~l~~---~~~~k~p~~vivt~p--n~~G~v~dl~~I~ela~~~~livDEAH~~~~-~f~~-~~~~~~al~~g~~ 354 (715)
T 3n75_A 282 HATIAKRVKE---TPNATWPVHAVITNS--TYDGLLYNTDFIKKTLDVKSIHFDSAWVPYT-NFSP-IYEGKCGMSGGRV 354 (715)
T ss_dssp HHHHHHHHHH---STTCCSCSEEEEESS--CTTSEEECHHHHHHHCCCSEEEEECTTCTTG-GGSG-GGTTSSTTSSSCC
T ss_pred HHHHHHHHhh---CcCccCceEEEEECC--CCCCccCCHHHHHHHhCcCcEEEcccccccc-ccCC-ccccccccccCcC
Confidence 4667777763 3221 15677788 6678877655444333222 1 1121 1111 110 011110123
Q ss_pred Cchh-----cccccccCCc-ccccceecHHHHH-hhhcCCcccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHH
Q psy6205 144 PDIV-----TVGKPMGNGH-PVAAVITTKEIAK-SFQETGVEYFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVG 213 (224)
Q Consensus 144 pDi~-----~~~K~l~~G~-p~~av~~~~~i~~-~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g 213 (224)
+|++ +++|.|+| + .-|.+.+++++.. .+. .......|.+-++..+|+..++++++++ +++.+++.++.
T Consensus 355 aD~vii~~~S~hKtL~g-ltqgs~i~v~~~i~~~~~~-~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~~l~~~a 432 (715)
T 3n75_A 355 EGKVIYETQSTHKLLAA-FSQASMIHVKGDVNEETFN-EAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLINGSIERA 432 (715)
T ss_dssp TTCEEEEEECHHHHSSC-CTTCEEEEEESCCCHHHHH-HHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEecccccccC-CCCeeEEEeCchhhHHHHH-HHHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 6864 58999864 1 1133555544211 122 1123456788999999999999999963 47899999999
Q ss_pred HHHHHhhhhc
Q psy6205 214 NQLHTPKKEN 223 (224)
Q Consensus 214 ~~l~~~l~~l 223 (224)
++|+++|+++
T Consensus 433 ~~~r~~L~~i 442 (715)
T 3n75_A 433 IKFRKEIKRL 442 (715)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 9999999764
No 205
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=96.11 E-value=0.021 Score=50.01 Aligned_cols=139 Identities=9% Similarity=-0.021 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHccCCCCceEEEEcc----ccCCCCcccCCHHHHHHHHH--H-----HHhCCccccccchhhhhcCCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAES----LQSCGGQIIPPANYLREVYK--H-----VQVGFGRVGTHWWAFQLQGDDII 143 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Ep----v~~~~G~~~~~~~~l~~~~~--~-----v~tG~GrtG~~~~~~~~~g~~v~ 143 (224)
+++|++.++. + ++..+|++|+ ..+..|.+.+-+++.+.+++ . |-.-++ ++. +..+... ..
T Consensus 164 ~e~l~~~i~~---~-~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~-~~~--~~~~p~~--~g 234 (427)
T 3hvy_A 164 INTVKEELKK---D-DSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYG-EFV--EEKEPTD--VG 234 (427)
T ss_dssp HHHHHHHHHH---C-TTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTC-TTT--SSSCGGG--GT
T ss_pred HHHHHHHhhC---C-CCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCcc-ccc--cCCCCcc--cC
Confidence 4556665542 1 3678999999 56666776666666666666 2 100010 110 0011111 22
Q ss_pred Cchh--cccccccCC-cc-cccceecHHHHHhhhcC--CcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Q psy6205 144 PDIV--TVGKPMGNG-HP-VAAVITTKEIAKSFQET--GVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLH 217 (224)
Q Consensus 144 pDi~--~~~K~l~~G-~p-~~av~~~~~i~~~~~~~--~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~ 217 (224)
.|++ +++|.++|+ -| .|.+++++++.+.+... ....+.+.+.++..+..++..|+.+ +...++..+...++.
T Consensus 235 aDiv~~S~sK~lgg~g~~~GG~i~~~~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~~--~~r~~~~~~~a~~la 312 (427)
T 3hvy_A 235 ADIIAGSLIKNIGGGIATTGGYIAGKEEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFMA--PHVTIEAVKGAVFCA 312 (427)
T ss_dssp CSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHHHH
T ss_pred CeEEEECCcccccccccceEEEEEECHHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhHH--HHHHHHHHHHHHHHH
Confidence 5776 689999875 34 47788899999888652 1122222222122234444444433 346777778888888
Q ss_pred HhhhhcC
Q psy6205 218 TPKKENN 224 (224)
Q Consensus 218 ~~l~~l~ 224 (224)
+.|++++
T Consensus 313 ~~L~~~g 319 (427)
T 3hvy_A 313 RIMELAG 319 (427)
T ss_dssp HHHHHTT
T ss_pred HHHHhCC
Confidence 8887654
No 206
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=96.01 E-value=0.017 Score=49.62 Aligned_cols=120 Identities=16% Similarity=0.104 Sum_probs=69.9
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCCCCchhc--c--cccccCCcc
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDIIPDIVT--V--GKPMGNGHP 158 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v~pDi~~--~--~K~l~~G~p 158 (224)
++.+|++.... |...+-++..+.+++. +++.+.+.. ....+ ..+|+++ + +|.+++| .
T Consensus 130 ~~~~v~~~~~~---G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~-----~~~~~--~~~~~~~~s~s~~K~~~~g-~ 198 (418)
T 2c81_A 130 KTKAIIPVHLF---GSMANMDEINEIAQEHNLFVIEDCAQSHGSVWN-----NQRAG--TIGDIGAFSCQQGKVLTAG-E 198 (418)
T ss_dssp TEEEECCBCCT---TCCCCHHHHHHHHHHTTCEEEEECTTCTTCEET-----TEETT--SSSSEEEEECCTTSSSCSS-S
T ss_pred CCeEEEEeCCc---CCcccHHHHHHHHHHCCCEEEEECcccccCccC-----CEecc--cccceEEEeccCCcccCCC-C
Confidence 57788876643 4454445555555554 555443211 11222 3346554 4 9999987 7
Q ss_pred ccccee-cHHHHHhhhc---CCcc-----------cc----------cCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q psy6205 159 VAAVIT-TKEIAKSFQE---TGVE-----------YF----------NTYGGNPVSCAVANAVMEVLETENLREHALDVG 213 (224)
Q Consensus 159 ~~av~~-~~~i~~~~~~---~~~~-----------~~----------~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g 213 (224)
.|++++ ++++.+.+.. .+.. +. .++..+++.++.++..++.++ .+.++.+++.
T Consensus 199 ~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~--~~~~~~~~~~ 276 (418)
T 2c81_A 199 GGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQELD--DKNAIREKNA 276 (418)
T ss_dssp CEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHTTHH--HHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHHHHHHHH--HHHHHHHHHH
Confidence 888888 4787766542 1100 11 122256776666666665553 4677888888
Q ss_pred HHHHHhhhhc
Q psy6205 214 NQLHTPKKEN 223 (224)
Q Consensus 214 ~~l~~~l~~l 223 (224)
++|.+.|+++
T Consensus 277 ~~l~~~L~~~ 286 (418)
T 2c81_A 277 MFLNDALSKI 286 (418)
T ss_dssp HHHHHHHTTS
T ss_pred HHHHHHhccC
Confidence 8998888764
No 207
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=95.69 E-value=0.039 Score=47.98 Aligned_cols=116 Identities=12% Similarity=0.037 Sum_probs=73.7
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHH--H--------HHh-CCccccccchhhhhcCCCCCCchh--cccccccC-C
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYK--H--------VQV-GFGRVGTHWWAFQLQGDDIIPDIV--TVGKPMGN-G 156 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~--~--------v~t-G~GrtG~~~~~~~~~g~~v~pDi~--~~~K~l~~-G 156 (224)
+..+|++|......|.+.+.++..+.+++ . ++. +++ . .... .-.|++ +++|.+++ |
T Consensus 167 ~tklV~~e~~~NptG~v~dl~~I~~la~~~~~g~~livD~a~a~~~~--~------~p~~--~g~Div~~S~sK~lg~~g 236 (415)
T 2fq6_A 167 NTKIVFLESPGSITMEVHDVPAIVAAVRSVVPDAIIMIDNTWAAGVL--F------KALD--FGIDVSIQAATKYLVGHS 236 (415)
T ss_dssp TEEEEEEESSCTTTCCCCCHHHHHHHHHHHCTTCEEEEECTTTTTTS--S------CGGG--GTCSEEEEETTTTTTCSS
T ss_pred CCcEEEEECCCCCCCEeecHHHHHHHHHhhcCCCEEEEECCCccccc--C------Cccc--cCCeEEEEeCccccCCCC
Confidence 57899999988889999988888888888 5 322 110 1 1111 236887 58999986 3
Q ss_pred -cccccceecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHH
Q psy6205 157 -HPVAAVITTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET--ENLREHALDVGNQLHT 218 (224)
Q Consensus 157 -~p~~av~~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~--~~l~~~~~~~g~~l~~ 218 (224)
...|++++++++.+.+.... .. .....+|..++.++..++.+.. +...++++.+.++|.+
T Consensus 237 ~~~~G~l~~~~~~~~~l~~~~-~~-~G~~~~~~~a~~~~~~l~~l~~r~~~~~~n~~~l~~~L~~ 299 (415)
T 2fq6_A 237 DAMIGTAVCNARCWEQLRENA-YL-MGQMVDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAE 299 (415)
T ss_dssp SCCCEEEEECTTTHHHHHHHH-HH-TTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEEeCHHHHHHHHHHH-Hh-cCCCCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 45688889988877665321 11 1223467877777777776632 2344455555555543
No 208
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=95.69 E-value=0.052 Score=47.49 Aligned_cols=138 Identities=11% Similarity=0.020 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHccCCCCceEEEEcc----ccCCCCcccCCHHHHHHHHH--H-----HHhCCccccccchhhhhcCCCCC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAES----LQSCGGQIIPPANYLREVYK--H-----VQVGFGRVGTHWWAFQLQGDDII 143 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Ep----v~~~~G~~~~~~~~l~~~~~--~-----v~tG~GrtG~~~~~~~~~g~~v~ 143 (224)
+++|++.++ ..++..+|++|+ ..+..|.+.+-+++.+.+++ . |-.-++ ++. +..+... ..
T Consensus 164 ~e~l~~~l~----~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~-~~~--~~~~p~~--~g 234 (427)
T 3i16_A 164 LEEIEKVLK----EDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYG-EFM--DTKEPTD--VG 234 (427)
T ss_dssp HHHHHHHHH----TCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTT-TTS--SSSCGGG--GT
T ss_pred HHHHHHHhh----CCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCc-ccc--ccCCccc--cC
Confidence 455665554 124678999999 66667777776677776766 3 100010 110 0011111 22
Q ss_pred Cchh--cccccccCC-cc-cccceecHHHHHhhhc--CCcccccCCCCcHHH-HHHHHHHHHHHhhhhHHHHHHHHHHHH
Q psy6205 144 PDIV--TVGKPMGNG-HP-VAAVITTKEIAKSFQE--TGVEYFNTYGGNPVS-CAVANAVMEVLETENLREHALDVGNQL 216 (224)
Q Consensus 144 pDi~--~~~K~l~~G-~p-~~av~~~~~i~~~~~~--~~~~~~~T~~~~p~~-~aaa~a~l~~~~~~~l~~~~~~~g~~l 216 (224)
.|++ +++|.+|++ -| .|++++++++.+.+.. ....++.+ .+.... +..++..|+.+ +...++..+...++
T Consensus 235 aDiv~~S~sK~lgg~g~~~gG~i~~~~~li~~l~~~~~~~~~g~~-~~~~~~~a~~~l~gl~~~--~~r~~~~~~~a~~l 311 (427)
T 3i16_A 235 ADLIAGSLIKNIGGGIAPTGGYLAGTKDCIEKTSYRLTVPGIGGE-CGSTFGVVRSMYQGLFLA--PHISMEALKGAILC 311 (427)
T ss_dssp CSEEEEETTSGGGTTTCCSCEEEEECHHHHHHHHHHHSCTTTGGG-CCCCTTCHHHHHHHHHHH--HHHHHHHHHHHHHH
T ss_pred CeEEEecCcccCCCCCCceEEEEEECHHHHHHHHHhcccCccCcc-CCccHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
Confidence 5766 589999875 34 5778889999998865 21111111 111122 33333333333 45667777777888
Q ss_pred HHhhhhcC
Q psy6205 217 HTPKKENN 224 (224)
Q Consensus 217 ~~~l~~l~ 224 (224)
.+.|++++
T Consensus 312 a~~L~~~g 319 (427)
T 3i16_A 312 SRIMELAG 319 (427)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhCC
Confidence 88877653
No 209
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=95.69 E-value=0.022 Score=49.83 Aligned_cols=125 Identities=12% Similarity=0.024 Sum_probs=66.3
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccchhhhhcCCCCCCchhcccccccC-Ccccccce
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMGN-GHPVAAVI 163 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~~-G~p~~av~ 163 (224)
.++.+|++|......|.+.+.++..+.+++. |-.-++ +|. ++....+| ....+.+++|.++| |..+++++
T Consensus 166 ~~t~~v~~e~p~NptG~~~dl~~i~~la~~~g~~livD~a~~-~~~-~~~~~~~g--~div~~S~sK~l~g~g~~~gG~v 241 (430)
T 3ri6_A 166 ETTKLLFLETISNPQLQVADLEALSKVVHAKGIPLVVDTTMT-PPY-LLEAKRLG--VDIEVLSSTKFISGGGTSVGGVL 241 (430)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTS-CTT-TCCGGGGT--CSEEEEECCCEEETTEEECCEEE
T ss_pred CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEECCCc-ccc-cCChHHcC--CEEEEECCcccccCCCCceEEEE
Confidence 3678999999999889888755555555544 111121 332 22333455 43334467899987 45555555
Q ss_pred e--cH-HH------------------HHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh
Q psy6205 164 T--TK-EI------------------AKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 164 ~--~~-~i------------------~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~g~~l~~~l~ 221 (224)
. .+ .. .+...... ........+|..+..++..++.+.. ..++..++.+++.+.|+
T Consensus 242 v~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~-~~~~g~~~~~~~a~l~l~~l~~l~~--r~~~~~~na~~la~~L~ 317 (430)
T 3ri6_A 242 IDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEV-FQNLGPSLSPHNAYLQSLGLETMAL--RIERSCQNAQELAHWLL 317 (430)
T ss_dssp EECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTH-HHHHCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHT
T ss_pred EECChHHhhhccchhhhhhhhchhhHHHHHHHHH-HHhcCCCCCHHHHHHHHhhhhhHHH--HHHHHHHHHHHHHHHHh
Confidence 4 21 11 11111110 0112233578888888888887743 23334444455555444
No 210
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=95.65 E-value=0.0025 Score=60.59 Aligned_cols=80 Identities=11% Similarity=0.011 Sum_probs=41.4
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLI 82 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~ 82 (224)
+||.|++|||.|+|+++|++.+..+..+....+..+.......+++..|..+..|...+... +++..++.++.|++.+
T Consensus 748 ~~~~v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~p~g~~lrl~pp~~~--t~e~id~~~~~l~~~l 825 (831)
T 4a0g_A 748 SHSAVQRVVVIGTLFALELKADASNSGYASLYAKSLLIMLREDGIFTRPLGNVIYLMCGPCT--SPEICRRLLTKLYKRL 825 (831)
T ss_dssp HSTTEEEEEEETTEEEEEEC---------CHHHHHHHHHHHHTTEECCCBTTEEEEECCTTC--CHHHHHHHHHHHHHHH
T ss_pred hCCCceeEeecccEEEEEEecCccccccchHHHHHHHHHHHHCCcEEEecCCEEEEECCCCC--CHHHHHHHHHHHHHHH
Confidence 47899999999999999998764322222222333333333334444444444442211111 2666667777777666
Q ss_pred HH
Q psy6205 83 EA 84 (224)
Q Consensus 83 ~~ 84 (224)
+.
T Consensus 826 ~~ 827 (831)
T 4a0g_A 826 GE 827 (831)
T ss_dssp TT
T ss_pred HH
Confidence 53
No 211
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=95.50 E-value=0.12 Score=45.28 Aligned_cols=139 Identities=9% Similarity=-0.066 Sum_probs=78.6
Q ss_pred HHHHHHHH-HHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-----HH---hCCccccccchhhhhcCCCCCCc
Q psy6205 75 AQDVQDLI-EAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQ---VGFGRVGTHWWAFQLQGDDIIPD 145 (224)
Q Consensus 75 ~~~l~~~~-~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~---tG~GrtG~~~~~~~~~g~~v~pD 145 (224)
+++|++.+ +.. ...++.+|++.-.....|.+.+-++..+.+++. |- .++ -.|..-...+.+. ..+|
T Consensus 216 ~~~l~~~i~~~~--~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~-~~g~~~~~~~~~~--~~~D 290 (456)
T 2z67_A 216 VEDIENAIKKEI--ELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQ-NNYYLEKLKKAFK--YRVD 290 (456)
T ss_dssp HHHHHHHHHHHH--HTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTT-CHHHHHHHHHHHT--SCCS
T ss_pred HHHHHHHHHHHh--hCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHH-HHHhhHHHHHhhC--CCCC
Confidence 45666666 311 123555565444334568888877777777776 11 111 1111000111121 1588
Q ss_pred hhcc--cccccCCccccccee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHh
Q psy6205 146 IVTV--GKPMGNGHPVAAVIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQLHTP 219 (224)
Q Consensus 146 i~~~--~K~l~~G~p~~av~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~~~ 219 (224)
++++ .|.++++..+|++++ ++++.+.+... +..+..++| ..+..+++..+.+ +++.++..++.++|.++
T Consensus 291 ~~~~s~hK~~~~p~g~G~l~~~~~~~~~~l~~~---~~g~~~~~~--~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~ 365 (456)
T 2z67_A 291 AVVSSSDKNLLTPIGGGLVYSTDAEFIKEISLS---YPGRASATP--VVNTLVSLLSMGSKNYLELVKNQKNSKKLLDEL 365 (456)
T ss_dssp EEEEEHHHHHCCCSSCEEEEESCHHHHHHHHTT---SCSCBCSHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCcCCCCCeEEEEEcCHHHHhhcCcC---CCCCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8765 897766677888999 57787776432 222333444 3344455555533 35677888999999999
Q ss_pred hhhc
Q psy6205 220 KKEN 223 (224)
Q Consensus 220 l~~l 223 (224)
|+++
T Consensus 366 L~~~ 369 (456)
T 2z67_A 366 LNDL 369 (456)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 8764
No 212
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=95.39 E-value=0.29 Score=43.53 Aligned_cols=146 Identities=19% Similarity=0.124 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCC-CCc
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDI-IPD 145 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v-~pD 145 (224)
.++|++.++.-...+..+.+|++.-.....|.+.+.++..+.+++. ++.|.--... -+.....| + ..|
T Consensus 232 ~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~-~~~~~~~g--~~~aD 308 (511)
T 3vp6_A 232 PADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLMSR-KHRHKLNG--IERAN 308 (511)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGGCT-TTGGGGTT--GGGCS
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcCCEEEEEccchhhHhhCh-hhhhhccC--CccCC
Confidence 4667776654222334477888887777888888777777777776 2222100000 00111112 2 357
Q ss_pred hhc--ccccccCCcccccceecHH-HHHhhhcCCccccc---------------CC-CCcHHHHHHHHHHHHHHhh---h
Q psy6205 146 IVT--VGKPMGNGHPVAAVITTKE-IAKSFQETGVEYFN---------------TY-GGNPVSCAVANAVMEVLET---E 203 (224)
Q Consensus 146 i~~--~~K~l~~G~p~~av~~~~~-i~~~~~~~~~~~~~---------------T~-~~~p~~~aaa~a~l~~~~~---~ 203 (224)
+++ ..|.++..+-.|+++++++ +.+........+.. |. .+.+..+.+..++|+.+.. +
T Consensus 309 sv~~~~hK~l~~p~g~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~ 388 (511)
T 3vp6_A 309 SVTWNPHKMMGVLLQCSAILVKEKGILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFE 388 (511)
T ss_dssp EEEECTTSTTCCCSCCEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEECcccccCCCcCeEEEEEeCHHHHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHH
Confidence 665 5788875566677777654 44433211101110 11 1112223344445555533 4
Q ss_pred hHHHHHHHHHHHHHHhhhhc
Q psy6205 204 NLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 204 ~l~~~~~~~g~~l~~~l~~l 223 (224)
++.++..++.++|.+.|+++
T Consensus 389 ~~~~~~~~~a~~l~~~L~~~ 408 (511)
T 3vp6_A 389 NQINKCLELAEYLYAKIKNR 408 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 67788889999999998764
No 213
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=95.10 E-value=0.054 Score=44.98 Aligned_cols=125 Identities=10% Similarity=0.056 Sum_probs=76.9
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHHHHhCCccc-cccchhhh---hcC---CCCC-Cchhc--ccccccCCccc
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKHVQVGFGRV-GTHWWAFQ---LQG---DDII-PDIVT--VGKPMGNGHPV 159 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~v~tG~Grt-G~~~~~~~---~~g---~~v~-pDi~~--~~K~l~~G~p~ 159 (224)
+++.+|+++......|.+.+ ++++.++.. +. |. +...+ .++ .++. .|+++ ++|.+++...+
T Consensus 129 ~~~~~v~~~~~~nptG~~~~----l~~i~~la~----~~p~~-~li~D~a~~~~~~~~~~~~~d~~~~s~~K~~~~~~G~ 199 (362)
T 3ffr_A 129 ADAEIICLTHNETSSGVSMP----VEDINTFRD----KNKDA-LIFVDAVSSLPYPKFDWTKIDSVFFSVQKCFGLPAGL 199 (362)
T ss_dssp TTCCEEEEESEETTTTEECC----HHHHTTSGG----GSTTS-EEEEECTTTTTSSCCCTTSCSEEEEETTSTTCCCSCC
T ss_pred CCccEEEEEcCCCCcceeCC----HHHHHHHHH----hCCCC-EEEEecccccCCcccChhHCcEEEEecccccCCCCce
Confidence 46778888888878888776 333433311 12 21 11100 011 0122 67775 45999854446
Q ss_pred ccceecHHHHHhhhcCC-----cc--------------cccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHH
Q psy6205 160 AAVITTKEIAKSFQETG-----VE--------------YFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQLH 217 (224)
Q Consensus 160 ~av~~~~~i~~~~~~~~-----~~--------------~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~ 217 (224)
+.+++++++.+.+.... .. ....++.++.+.++..++++.+.+ +.+.++.+++.+++.
T Consensus 200 g~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~ 279 (362)
T 3ffr_A 200 GVWILNDRVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALIN 279 (362)
T ss_dssp EEEEEEHHHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred EEEEECHHHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 77889999887665310 00 011455677788888888988754 467778888999999
Q ss_pred Hhhhhc
Q psy6205 218 TPKKEN 223 (224)
Q Consensus 218 ~~l~~l 223 (224)
+.|+++
T Consensus 280 ~~L~~~ 285 (362)
T 3ffr_A 280 TYIESS 285 (362)
T ss_dssp HHHHHC
T ss_pred HHHHHc
Confidence 998875
No 214
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=94.69 E-value=0.05 Score=45.56 Aligned_cols=78 Identities=14% Similarity=0.162 Sum_probs=55.6
Q ss_pred chh--cccccccC-CcccccceecHHHHHhhhcCCc-cc---------ccCCCCcHHHHHHHHHHHHHHhh----hhHHH
Q psy6205 145 DIV--TVGKPMGN-GHPVAAVITTKEIAKSFQETGV-EY---------FNTYGGNPVSCAVANAVMEVLET----ENLRE 207 (224)
Q Consensus 145 Di~--~~~K~l~~-G~p~~av~~~~~i~~~~~~~~~-~~---------~~T~~~~p~~~aaa~a~l~~~~~----~~l~~ 207 (224)
|++ +++|.+|. | +|.+++++++.+.+..... .+ ...++-++.+.+++.++|+.+++ +...+
T Consensus 189 d~~~~s~~K~~g~~G--~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~ 266 (362)
T 2c0r_A 189 GLVYAGAQKNLGPSG--VTVVIVREDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQ 266 (362)
T ss_dssp SEEEEETTTTTCCSS--CEEEEEEGGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred cEEEEeccccccCcC--cEEEEEcHHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 655 57999972 4 6788999888766643100 00 12356678888999999998765 56778
Q ss_pred HHHHHHHHHHHhhhhcC
Q psy6205 208 HALDVGNQLHTPKKENN 224 (224)
Q Consensus 208 ~~~~~g~~l~~~l~~l~ 224 (224)
+.+++.++|.+.|++++
T Consensus 267 ~~~~~~~~l~~~L~~~~ 283 (362)
T 2c0r_A 267 ANRKKASLIYDAIDQSG 283 (362)
T ss_dssp HHHHHHHHHHHHHHTST
T ss_pred HHHHHHHHHHHHHHHcC
Confidence 88899999999998763
No 215
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=94.60 E-value=0.19 Score=44.53 Aligned_cols=73 Identities=11% Similarity=-0.009 Sum_probs=50.5
Q ss_pred cccccc-c-CCcccccce---ecHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHH-----------HHh-hhhHHHHHH
Q psy6205 148 TVGKPM-G-NGHPVAAVI---TTKEIAKSFQETGVEYFNTYGGNPVSCAVANAVME-----------VLE-TENLREHAL 210 (224)
Q Consensus 148 ~~~K~l-~-~G~p~~av~---~~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~-----------~~~-~~~l~~~~~ 210 (224)
++||.+ | .|+.+|.++ .++++.+.+... ...+...++++.+++.+.++ .++ .+.+.++++
T Consensus 313 S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~---~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~ 389 (498)
T 3ihj_A 313 STSKGYMGECGYRGGYMEVINLHPEIKGQLVKL---LSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFSREKESVLGNLA 389 (498)
T ss_dssp ESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHH---HHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHH
T ss_pred ccccccccCcccceEEEEEecCCHHHHHHHHHH---HhccCCCCHHHHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHH
Confidence 689999 4 688899988 689999887643 12334456666666665552 232 246677888
Q ss_pred HHHHHHHHhhhhc
Q psy6205 211 DVGNQLHTPKKEN 223 (224)
Q Consensus 211 ~~g~~l~~~l~~l 223 (224)
+..+++.+.|+++
T Consensus 390 ~~~~~l~~~L~~~ 402 (498)
T 3ihj_A 390 KKAKLTEDLFNQV 402 (498)
T ss_dssp HHHHHHHHHHHTS
T ss_pred HHHHHHHHHHhcC
Confidence 8888888888764
No 216
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=94.43 E-value=0.023 Score=50.16 Aligned_cols=81 Identities=12% Similarity=0.085 Sum_probs=45.2
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCcccc----chhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATSE----AQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQD 77 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~----a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~ 77 (224)
.++|.|+++||.|+|.+++++.+..++.++... +..+.......++...+..++.|...+... +++..++.++.
T Consensus 367 ~~~~~v~~vr~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g~~iRi~p~~~~--t~e~i~~~l~~ 444 (472)
T 3hmu_A 367 TDHPLVGEAKIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVGDRMIISPPLVI--TPAEIDEMFVR 444 (472)
T ss_dssp GGSTTEEEEEEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEETTEEEECCCTTC--CHHHHHHHHHH
T ss_pred hcCCCeEEEEecCceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEecCCEEEEECCCCC--CHHHHHHHHHH
Confidence 347889999999999999998765555554211 222222222233333333344443322111 25666666777
Q ss_pred HHHHHHH
Q psy6205 78 VQDLIEA 84 (224)
Q Consensus 78 l~~~~~~ 84 (224)
|++.++.
T Consensus 445 l~~~l~~ 451 (472)
T 3hmu_A 445 IRKSLDE 451 (472)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7666654
No 217
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=94.25 E-value=0.15 Score=43.27 Aligned_cols=80 Identities=11% Similarity=0.038 Sum_probs=54.3
Q ss_pred Cchhcc--cccccCCcccccceecHHHHHhhhcC--------C-cc---------cccC-CCCcHHHHHHHHHHHHHHhh
Q psy6205 144 PDIVTV--GKPMGNGHPVAAVITTKEIAKSFQET--------G-VE---------YFNT-YGGNPVSCAVANAVMEVLET 202 (224)
Q Consensus 144 pDi~~~--~K~l~~G~p~~av~~~~~i~~~~~~~--------~-~~---------~~~T-~~~~p~~~aaa~a~l~~~~~ 202 (224)
+|++++ +|.++.+--+|++++++++.+.+... . .. ...+ ++-|..+++++.++|+.+.+
T Consensus 213 ~di~~~s~sK~~~~~gg~g~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~ 292 (398)
T 2fyf_A 213 TDAYYFAPQKNFASDGGLWLAIMSPAALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVG 292 (398)
T ss_dssp CSEEEECTTSTTCSCSSEEEEEECHHHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHH
T ss_pred CcEEEEecCcccCCCCceEEEEECHHHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 687765 49998642278899999998766310 0 00 0123 34566677788889988754
Q ss_pred ----hhHHHHHHHHHHHHHHhhhhc
Q psy6205 203 ----ENLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 203 ----~~l~~~~~~~g~~l~~~l~~l 223 (224)
+.+.++.+++.+++.+.|+++
T Consensus 293 ~g~~~~~~~~~~~~~~~l~~~L~~~ 317 (398)
T 2fyf_A 293 NGGLDWAVKRTADSSQRLYSWAQER 317 (398)
T ss_dssp HTSHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHc
Confidence 346778888999999998865
No 218
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=94.07 E-value=0.14 Score=42.52 Aligned_cols=78 Identities=15% Similarity=0.185 Sum_probs=53.0
Q ss_pred chhc--ccccccCCcccccceecHHHHHhhhcCCcc---------cccCC-CCcHHHHHHHHHHHHHHhh----hhHHHH
Q psy6205 145 DIVT--VGKPMGNGHPVAAVITTKEIAKSFQETGVE---------YFNTY-GGNPVSCAVANAVMEVLET----ENLREH 208 (224)
Q Consensus 145 Di~~--~~K~l~~G~p~~av~~~~~i~~~~~~~~~~---------~~~T~-~~~p~~~aaa~a~l~~~~~----~~l~~~ 208 (224)
|+++ ++|.+|. ..+|.+++++++.+.+...... ..+++ +.++.+++++.++|+.+++ +.+.++
T Consensus 188 di~~~s~sK~~~~-~G~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~ 266 (360)
T 1w23_A 188 GMIYAGAQKNLGP-SGVTVVIVKKDLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQ 266 (360)
T ss_dssp SEEEEETTTTTSC-TTCEEEEEEHHHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred CEEEEEcccccCC-CCcEEEEEcHHHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 7775 4599973 1378899999988766432100 11222 3456677788888988754 357788
Q ss_pred HHHHHHHHHHhhhhc
Q psy6205 209 ALDVGNQLHTPKKEN 223 (224)
Q Consensus 209 ~~~~g~~l~~~l~~l 223 (224)
.+++.+++.+.|+++
T Consensus 267 ~~~~~~~l~~~L~~~ 281 (360)
T 1w23_A 267 NEEKAKIIYDTIDES 281 (360)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHc
Confidence 888999999988765
No 219
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=94.03 E-value=0.036 Score=48.97 Aligned_cols=82 Identities=12% Similarity=0.009 Sum_probs=45.0
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCccc---cchhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATS---EAQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDV 78 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~---~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l 78 (224)
.++|.++++||.|+|.+++++.+..+..++.. .+..+.......++...+..+..|...+... +++..++.++.|
T Consensus 370 ~~~~~v~~v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g~~iRi~p~l~~--t~e~i~~~l~~l 447 (476)
T 3i5t_A 370 RDLPGVAETRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPLGDLCVISPPLII--SRAQIDEMVAIM 447 (476)
T ss_dssp TTSTTEEEEEEETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEETTEEEECCCTTC--CHHHHHHHHHHH
T ss_pred hcCCCeEEEEecCceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEecCCEEEEECCCCC--CHHHHHHHHHHH
Confidence 45789999999999999999876665555321 1222222222234444444344443322111 266677777777
Q ss_pred HHHHHHH
Q psy6205 79 QDLIEAM 85 (224)
Q Consensus 79 ~~~~~~~ 85 (224)
++.++.+
T Consensus 448 ~~~l~~~ 454 (476)
T 3i5t_A 448 RQAITEV 454 (476)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777654
No 220
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=93.85 E-value=0.24 Score=43.64 Aligned_cols=78 Identities=10% Similarity=0.087 Sum_probs=46.6
Q ss_pred Cchhcc--cccccCCcccccceecHH---------------HHHhhhcCCccccc-CCCCcHHHHHHHHHHHHHHhh---
Q psy6205 144 PDIVTV--GKPMGNGHPVAAVITTKE---------------IAKSFQETGVEYFN-TYGGNPVSCAVANAVMEVLET--- 202 (224)
Q Consensus 144 pDi~~~--~K~l~~G~p~~av~~~~~---------------i~~~~~~~~~~~~~-T~~~~p~~~aaa~a~l~~~~~--- 202 (224)
.|++++ +|.|+| ...|.++++++ +.+.+... .+.. +.+.+...+++..++++.+.+
T Consensus 247 ~div~~s~~K~l~G-prgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~--~~~~~~g~~~~~~iaal~~Al~~~~~~~~ 323 (483)
T 1rv3_A 247 CHVVTTTTHKTLRG-CRAGMIFYRRGVRSVDPKTGKEILYNLESLINSA--VFPGLQGGPHNHAIAGVAVALKQAMTPEF 323 (483)
T ss_dssp CSEEEEESSGGGCC-CSCEEEEEECSBCC-------CCBCCHHHHHHHH--HTTTTCCSCCHHHHHHHHHHHHHHTSHHH
T ss_pred CcEEEecCcccCCC-CCceEEEEcchhhhhccccCcchhhHHHHHhhhh--cCCcccCCccHHHHHHHHHHHHHHhChhH
Confidence 587764 599954 34477888764 33333211 1111 112234455555667777753
Q ss_pred hhHHHHHHHHHHHHHHhhhhcC
Q psy6205 203 ENLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 203 ~~l~~~~~~~g~~l~~~l~~l~ 224 (224)
+.+.+++.++.++|.+.|+++|
T Consensus 324 ~~~~~~~~~~~~~l~~~L~~~g 345 (483)
T 1rv3_A 324 KEYQRQVVANCRALSAALVELG 345 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHhcC
Confidence 4677888899999999988653
No 221
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=93.18 E-value=1.4 Score=38.70 Aligned_cols=145 Identities=13% Similarity=0.038 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCC-CCc
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDI-IPD 145 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v-~pD 145 (224)
.++|++.++.-...+....+|++.-.....|.+.+-++..+.+++. .+.|+--.+. .+.....| + ..|
T Consensus 225 ~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~~I~~la~~~~~~lhvDaA~g~~~~~~~-~~~~~~~g--i~~aD 301 (481)
T 4e1o_A 225 GEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLSELGPICAREGLWLHIDAAYAGTAFLCP-EFRGFLKG--IEYAD 301 (481)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGGGGSG-GGGGGGTT--GGGCS
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHHHHHHHHHHcCCeEEeehhhHHHHHhCh-hhHHHhcC--cccCC
Confidence 4567766654222222344455554455678887877777777776 2222111111 01111123 3 357
Q ss_pred hhcc--cccccCCcccccceecHHH-H-HhhhcCCcccc-----------------cCCCCcHHHHHHHHHHHHHHhhhh
Q psy6205 146 IVTV--GKPMGNGHPVAAVITTKEI-A-KSFQETGVEYF-----------------NTYGGNPVSCAVANAVMEVLETEN 204 (224)
Q Consensus 146 i~~~--~K~l~~G~p~~av~~~~~i-~-~~~~~~~~~~~-----------------~T~~~~p~~~aaa~a~l~~~~~~~ 204 (224)
.+++ .|.++.-+..|+++++++- . +.+.... .+. .+.....+.+.+++..+..---++
T Consensus 302 si~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~ 380 (481)
T 4e1o_A 302 SFTFNPSKWMMVHFDCTGFWVKDKYKLQQTFSVNP-IYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQA 380 (481)
T ss_dssp EEEECHHHHSSCCSSCEEEEESBHHHHHTTTCCCC-GGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEChHHhcCCCCceEEEEEeCHHHHHHHhcCCc-hhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHH
Confidence 7765 7888765566677776542 2 2221110 111 111123444444444332211245
Q ss_pred HHHHHHHHHHHHHHhhhhc
Q psy6205 205 LREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 205 l~~~~~~~g~~l~~~l~~l 223 (224)
+.++..++.++|.+.|+++
T Consensus 381 ~~~~~~~~a~~l~~~L~~~ 399 (481)
T 4e1o_A 381 HVRHGTEMAKYFESLVRND 399 (481)
T ss_dssp HHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 6778889999999999865
No 222
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=92.97 E-value=0.079 Score=46.26 Aligned_cols=82 Identities=15% Similarity=0.120 Sum_probs=47.4
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCcccc---chhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATSE---AQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDV 78 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~---a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l 78 (224)
.++|.++++|+.|+|.+++++.+..++.++... +..+.......++...+..++.|...+... +++..++.++.|
T Consensus 365 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g~~iRi~~~~~~--t~e~i~~~l~~l 442 (459)
T 4a6r_A 365 SRFEHVDDVRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIFFRNNLIMRACGDHIVSAPPLVM--TRAEVDEMLAVA 442 (459)
T ss_dssp TTCTTEEEEEEETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHHHHTTEECEEETTEEEECCCTTC--CHHHHHHHHHHH
T ss_pred hcCCCeEEEEEEEEEEEEEEecCccccccccchHHHHHHHHHHHHHCCeEEecCCCEEEEECCCCC--CHHHHHHHHHHH
Confidence 457889999999999999998776665554211 222222222234444443344443322111 256667777777
Q ss_pred HHHHHHH
Q psy6205 79 QDLIEAM 85 (224)
Q Consensus 79 ~~~~~~~ 85 (224)
++.++.+
T Consensus 443 ~~~l~~~ 449 (459)
T 4a6r_A 443 ERCLEEF 449 (459)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7776653
No 223
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=92.88 E-value=0.052 Score=47.93 Aligned_cols=77 Identities=13% Similarity=0.078 Sum_probs=42.2
Q ss_pred CCCcceeeccCCceeEEEEeecCCCC-CCcc----ccchhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQK-TPAT----SEAQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQD 77 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~-~p~~----~~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~ 77 (224)
+||.+.+|||.|+|+|+||+....+. .+.. .....+...+...+++..|..+++. +... +++..++.++.
T Consensus 364 ~~~~~~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~~Gv~~~p~~~~~~-s~~~----T~~dId~~l~a 438 (454)
T 4ao9_A 364 NEGVAMQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLNEDIYSSPRGFVVL-SLPL----TDADIDRYVAA 438 (454)
T ss_dssp HHTBSCEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHHTTEECCTTCEEEC-CTTC----CHHHHHHHHHH
T ss_pred hCCCCEEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHHCCEEEcCCCCEEE-eCCC----CHHHHHHHHHH
Confidence 47889999999999999997643221 1111 1111222222223444333332221 1111 26677888888
Q ss_pred HHHHHHH
Q psy6205 78 VQDLIEA 84 (224)
Q Consensus 78 l~~~~~~ 84 (224)
+++.+..
T Consensus 439 l~~~l~~ 445 (454)
T 4ao9_A 439 IGSFIGG 445 (454)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8888875
No 224
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=92.61 E-value=0.12 Score=44.98 Aligned_cols=82 Identities=21% Similarity=0.274 Sum_probs=48.9
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCccccc---hhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATSEA---QHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDV 78 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a---~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l 78 (224)
..+|.+.++|+.|+|.++++..+..+..++.... ..+.......++...|..++.|...+... +++..++.++.|
T Consensus 359 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~iRi~~~~~~--t~e~i~~~l~~l 436 (448)
T 3dod_A 359 HALPHVGDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLGDVIAFLPPLAS--TAEELSEMVAIM 436 (448)
T ss_dssp TTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEETTEEEECCCTTC--CHHHHHHHHHHH
T ss_pred hcCCCeEEEEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEeccCCEEEEECCCCC--CHHHHHHHHHHH
Confidence 3578899999999999999987766655543221 22222222234444444444554222111 256677778888
Q ss_pred HHHHHHH
Q psy6205 79 QDLIEAM 85 (224)
Q Consensus 79 ~~~~~~~ 85 (224)
++.++.+
T Consensus 437 ~~~l~~~ 443 (448)
T 3dod_A 437 KQAIHEV 443 (448)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8777654
No 225
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=91.63 E-value=1.4 Score=38.53 Aligned_cols=146 Identities=12% Similarity=-0.010 Sum_probs=70.4
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCC-CCc
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDI-IPD 145 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v-~pD 145 (224)
.++|++.++.-...+....+|++.-.....|.+.+-++..+.+++. .+.|.-.... .+.....| + ..|
T Consensus 218 ~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~-~~~~~~~g--i~~~D 294 (475)
T 3k40_A 218 GAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHVDAAYAGSAFICP-EYRHLMKG--IESAD 294 (475)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGSG-GGGGGGTT--GGGCS
T ss_pred HHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEEeHHhHHHHHhCH-hhHHHhcC--cccCC
Confidence 4667766654211222234444443344567787777777777776 2222101111 01111112 3 358
Q ss_pred hhcc--cccccCCcccccceecHH-H-HHhhhcCCcccc------------cCC-CCcHHHHHHHHHHHHHHhh---hhH
Q psy6205 146 IVTV--GKPMGNGHPVAAVITTKE-I-AKSFQETGVEYF------------NTY-GGNPVSCAVANAVMEVLET---ENL 205 (224)
Q Consensus 146 i~~~--~K~l~~G~p~~av~~~~~-i-~~~~~~~~~~~~------------~T~-~~~p~~~aaa~a~l~~~~~---~~l 205 (224)
.+++ .|.+++-+..|+++++++ . .+.+........ .|. .+-+.......++|+.+.. +++
T Consensus 295 s~~~~~hK~l~~p~g~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~ 374 (475)
T 3k40_A 295 SFNFNPHKWMLVNFDCSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAH 374 (475)
T ss_dssp EEEECHHHHSSCCSSCEEEEESSGGGC---------------------------CCCGGGTHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECchhccCCCCceEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHH
Confidence 7765 688776566677777654 2 122211000000 011 1212223344455555533 467
Q ss_pred HHHHHHHHHHHHHhhhhc
Q psy6205 206 REHALDVGNQLHTPKKEN 223 (224)
Q Consensus 206 ~~~~~~~g~~l~~~l~~l 223 (224)
.++..++.++|.++|+++
T Consensus 375 ~~~~~~~a~~l~~~L~~~ 392 (475)
T 3k40_A 375 IRRHCNFAKQFGDLCVAD 392 (475)
T ss_dssp HHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhcC
Confidence 788889999999999865
No 226
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=91.41 E-value=0.18 Score=43.07 Aligned_cols=74 Identities=26% Similarity=0.263 Sum_probs=52.3
Q ss_pred ccccccc-CCccccccee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHh---------h---hhHHHHHHHHH
Q psy6205 148 TVGKPMG-NGHPVAAVIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLE---------T---ENLREHALDVG 213 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~---------~---~~l~~~~~~~g 213 (224)
+++|.+| .|+-+|.+++ ++++.+.+... ....+++.++++..++.+.|+.-. + +.+.+++++.-
T Consensus 214 S~SK~~g~~GlRiG~~~~~~~~l~~~l~~~--~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (391)
T 3bwn_A 214 TFSKITGHAGSRIGWALVKDKEVAKKMVEY--IIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRW 291 (391)
T ss_dssp EHHHHHSCGGGCEEEEEECCHHHHHHHHHH--HHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHH
T ss_pred echhhcCCCccceEEEEecCHHHHHHHHHH--hcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHH
Confidence 6899997 6888899987 88998887642 122346678888888888887532 1 23556667777
Q ss_pred HHHHHhhhhc
Q psy6205 214 NQLHTPKKEN 223 (224)
Q Consensus 214 ~~l~~~l~~l 223 (224)
+++.+.|+++
T Consensus 292 ~~l~~~L~~~ 301 (391)
T 3bwn_A 292 EKLREVVKES 301 (391)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHhC
Confidence 7787777754
No 227
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=91.34 E-value=0.2 Score=43.64 Aligned_cols=82 Identities=17% Similarity=0.211 Sum_probs=47.6
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCCcccc---chhhhccCCCcceeecCCC--ccccCCCCCCCCCChhHHHHHHH
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTPATSE---AQHVITRPPVRMSTEAPCP--DVYRGKYPADKYPDEDLGVKYAQ 76 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~---a~~l~~~~~~~~~~~vp~P--~~yr~~~~~~~~~~~~~~~~~~~ 76 (224)
.++|.++++|+.|+|.+++++.+..+..++... +..+.......++...+.. ++.|...+... +++..++.++
T Consensus 370 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~iRi~~~~~~--t~e~i~~~l~ 447 (460)
T 3gju_A 370 GGHKNVGEVRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMPQGDILGFAPPLCL--TREQADIVVS 447 (460)
T ss_dssp TTSTTEEEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECSSSCEEEECCCTTC--CHHHHHHHHH
T ss_pred hcCCCeEEEeeeeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCCCCCEEEEECCCCC--CHHHHHHHHH
Confidence 457889999999999999998776655544211 1122222222334443432 44443322111 2566777788
Q ss_pred HHHHHHHHH
Q psy6205 77 DVQDLIEAM 85 (224)
Q Consensus 77 ~l~~~~~~~ 85 (224)
.|++.++.+
T Consensus 448 ~l~~~l~~~ 456 (460)
T 3gju_A 448 KTADAVKSV 456 (460)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888777654
No 228
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=91.14 E-value=0.27 Score=43.79 Aligned_cols=78 Identities=15% Similarity=0.159 Sum_probs=46.6
Q ss_pred Cchh--cccccccCCcccccceecHH---------------HHHhhhcCCcccccCCCC-cHHHHHHHHHHHHHHhh---
Q psy6205 144 PDIV--TVGKPMGNGHPVAAVITTKE---------------IAKSFQETGVEYFNTYGG-NPVSCAVANAVMEVLET--- 202 (224)
Q Consensus 144 pDi~--~~~K~l~~G~p~~av~~~~~---------------i~~~~~~~~~~~~~T~~~-~p~~~aaa~a~l~~~~~--- 202 (224)
.|++ +++|+|+| ..-|+++++++ +.+.+... .+..+.++ ++..+++..++++.+.+
T Consensus 257 aDiv~~S~hK~l~G-p~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~g~qggp~~~~iaAla~Al~~~~~~~~ 333 (490)
T 2a7v_A 257 ADIVTTTTHKTLRG-ARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFA--VFPSLQGGPHNHAIAAVAVALKQACTPMF 333 (490)
T ss_dssp CSEEEEESSGGGCS-CSCEEEEEECSEEEEETTTEEEEECCCHHHHHHH--HTTTTCCSCCHHHHHHHHHHHHHHHSHHH
T ss_pred CCEEEECCcccCcc-ccchheeeccchhcccccccchhhHHHHHHHHHH--hcccCCCCchHHHHHHHHHHHHHHhhhhH
Confidence 4766 57899964 23355777654 33333321 22233333 34445555556666532
Q ss_pred hhHHHHHHHHHHHHHHhhhhcC
Q psy6205 203 ENLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 203 ~~l~~~~~~~g~~l~~~l~~l~ 224 (224)
+.+.+++.++.++|.+.|+++|
T Consensus 334 ~~~~~~~~~na~~L~~~L~~~G 355 (490)
T 2a7v_A 334 REYSLQVLKNARAMADALLERG 355 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcC
Confidence 4677888999999999998764
No 229
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=90.85 E-value=1.3 Score=38.02 Aligned_cols=124 Identities=13% Similarity=0.136 Sum_probs=68.4
Q ss_pred CceEEEEccccCCCCcccCCHHHHHHHHHH----H--Hh--CCccccccchhhhhcCCCCCCchhcc-ccccc-----CC
Q psy6205 91 RPCAFFAESLQSCGGQIIPPANYLREVYKH----V--QV--GFGRVGTHWWAFQLQGDDIIPDIVTV-GKPMG-----NG 156 (224)
Q Consensus 91 ~iaavi~Epv~~~~G~~~~~~~~l~~~~~~----v--~t--G~GrtG~~~~~~~~~g~~v~pDi~~~-~K~l~-----~G 156 (224)
++.+|++.-. ...|.+.+-++..+.+++. + .. .+|... ....++ +|++++ +|.+| +|
T Consensus 196 ~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~----~~~~~g----~D~~~~s~kk~~~~~~~~G 266 (438)
T 1wyu_A 196 EVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLK----PPGAYG----ADIAVGDGQSLGLPMGFGG 266 (438)
T ss_dssp TEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBC----CHHHHT----CSEEEEECTTTTCCCGGGC
T ss_pred CeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcC----CCccCC----CCEEEECCcccCCCccCCC
Confidence 4667777764 6788888766666666665 1 11 122111 112233 788887 47543 22
Q ss_pred cccccceecHHHHHhhhcCC----------cc--------------cccCCCC---cHHHHHHHHHHHHHHhh---hhHH
Q psy6205 157 HPVAAVITTKEIAKSFQETG----------VE--------------YFNTYGG---NPVSCAVANAVMEVLET---ENLR 206 (224)
Q Consensus 157 ~p~~av~~~~~i~~~~~~~~----------~~--------------~~~T~~~---~p~~~aaa~a~l~~~~~---~~l~ 206 (224)
.-+|.+++++++.+.+...- .. ...|+.- +.++..++...++.+.+ +++.
T Consensus 267 p~~G~l~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~ 346 (438)
T 1wyu_A 267 PHFGFLATKKAFVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVA 346 (438)
T ss_dssp SCCEEEEECGGGGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeeEEEEcHHHHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 24677889988877653110 00 0123322 33333222233555543 3567
Q ss_pred HHHHHHHHHHHHhhhhc
Q psy6205 207 EHALDVGNQLHTPKKEN 223 (224)
Q Consensus 207 ~~~~~~g~~l~~~l~~l 223 (224)
++.+++.+++.++|+++
T Consensus 347 ~~~~~~~~~l~~~L~~~ 363 (438)
T 1wyu_A 347 LKSVEMAHKLHALLLEV 363 (438)
T ss_dssp HHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 78888999999999875
No 230
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=89.87 E-value=0.42 Score=41.37 Aligned_cols=74 Identities=11% Similarity=0.011 Sum_probs=51.3
Q ss_pred ccccccc-CCccccccee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh---------h----hHHHHHHHH
Q psy6205 148 TVGKPMG-NGHPVAAVIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET---------E----NLREHALDV 212 (224)
Q Consensus 148 ~~~K~l~-~G~p~~av~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~---------~----~l~~~~~~~ 212 (224)
+++|.+| .|+-+|.+++ ++++.+.+... ....+++.++++..++.+.|+...+ + ...+++++.
T Consensus 248 S~SK~~g~~G~RiG~~~~~~~~l~~~l~~~--~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 325 (427)
T 2hox_A 248 TMSKFTGHSGSRFGWALIKDESVYNNLLNY--MTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRER 325 (427)
T ss_dssp EHHHHTSCGGGCCEEEEECCHHHHHHHHHH--HHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHH
T ss_pred eChhcCCCCCceEEEEEECCHHHHHHHHHH--HHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHH
Confidence 6899998 6888899999 58998887643 2224556677777777777765321 1 345667777
Q ss_pred HHHHHHhhhhc
Q psy6205 213 GNQLHTPKKEN 223 (224)
Q Consensus 213 g~~l~~~l~~l 223 (224)
-++|.+.|+++
T Consensus 326 ~~~l~~~L~~~ 336 (427)
T 2hox_A 326 WVNITALLDQS 336 (427)
T ss_dssp HHHHHHHHTTS
T ss_pred HHHHHHHHHhC
Confidence 78888888764
No 231
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=89.80 E-value=0.74 Score=43.16 Aligned_cols=75 Identities=11% Similarity=0.131 Sum_probs=48.1
Q ss_pred cccccccCCcccccceecHH---H-HHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHhh
Q psy6205 148 TVGKPMGNGHPVAAVITTKE---I-AKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQLHTPK 220 (224)
Q Consensus 148 ~~~K~l~~G~p~~av~~~~~---i-~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~~~l 220 (224)
+++|.++|--..|.+.++++ + ...+... .....|.+-|...+++..++++.+++ +++.++..++.++++++|
T Consensus 383 S~hK~L~g~~~g~~i~~~~~~~~i~~~~~~~~-~~~~~s~sp~~~~iaal~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L 461 (755)
T 2vyc_A 383 STHKLLNALSQASYIHVREGRGAINFSRFNQA-YMMHATTSPLYAICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAM 461 (755)
T ss_dssp ETTTSSSCCTTCEEEEEECCBTCCCHHHHHHH-HHHTSCSSCCHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccccCcCCeeeeeecCcccccCHHHHHHH-HHHhCCCCHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 57999863112344555443 1 1122211 11234556778888888899998865 368899999999999999
Q ss_pred hhc
Q psy6205 221 KEN 223 (224)
Q Consensus 221 ~~l 223 (224)
+++
T Consensus 462 ~~l 464 (755)
T 2vyc_A 462 ARL 464 (755)
T ss_dssp HHH
T ss_pred Hhc
Confidence 764
No 232
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=89.76 E-value=4.3 Score=35.27 Aligned_cols=146 Identities=10% Similarity=-0.002 Sum_probs=69.0
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH--------HHhCCccccccchhhhhcCCCC-CCc
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH--------VQVGFGRVGTHWWAFQLQGDDI-IPD 145 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------v~tG~GrtG~~~~~~~~~g~~v-~pD 145 (224)
.++|++.+..-.+.+....+|++--.....|.+.+-++..+.+++. .+.|+-.... -+.....+ + ..|
T Consensus 219 ~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~-~~~~~~~g--~~~ad 295 (486)
T 1js3_A 219 ASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLHVDAAYAGSAFICP-EFRHLLNG--VEFAD 295 (486)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEEECTTGGGGGGST-TTGGGGTT--GGGCS
T ss_pred HHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhHHHHHHCH-HHHHHhcC--ccccC
Confidence 4566666653211222233444443334567777777777777776 3222111110 00000112 2 257
Q ss_pred hhc--ccccccCCcccccceecHH--HHHhhhcCC-cccc-----------------cCCCCcHHHHHHHHHHHHHHhhh
Q psy6205 146 IVT--VGKPMGNGHPVAAVITTKE--IAKSFQETG-VEYF-----------------NTYGGNPVSCAVANAVMEVLETE 203 (224)
Q Consensus 146 i~~--~~K~l~~G~p~~av~~~~~--i~~~~~~~~-~~~~-----------------~T~~~~p~~~aaa~a~l~~~~~~ 203 (224)
.++ ..|.++..+.+|+++++++ +.+.+.... .... .+.....+++.+++..+..-.-+
T Consensus 296 si~~~~hK~~~~p~~~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g~~g~~ 375 (486)
T 1js3_A 296 SFNFNPHKWLLVNFDCSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYGVKGLQ 375 (486)
T ss_dssp EEEECHHHHSSCCSSCEEEEESCHHHHHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHHHHHHH
T ss_pred eeEEchhhhcCCCcceEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHhHHHHH
Confidence 766 4687765567788888654 234442110 0000 01112334444444333211123
Q ss_pred hHHHHHHHHHHHHHHhhhhc
Q psy6205 204 NLREHALDVGNQLHTPKKEN 223 (224)
Q Consensus 204 ~l~~~~~~~g~~l~~~l~~l 223 (224)
++.++..++.++|.+.|+++
T Consensus 376 ~~~~~~~~~a~~l~~~L~~~ 395 (486)
T 1js3_A 376 AYIRKHVQLSHEFEAFVLQD 395 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhcC
Confidence 46677778888898888764
No 233
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=88.95 E-value=0.34 Score=42.23 Aligned_cols=80 Identities=23% Similarity=0.301 Sum_probs=44.9
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCC---CccccCCCCCCCCCChhHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPC---PDVYRGKYPADKYPDEDLGVKYAQDVQ 79 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~---P~~yr~~~~~~~~~~~~~~~~~~~~l~ 79 (224)
++|.+.++||.|+|.+++++. ..++.|.......+.......++...+. ++..|...+... +++..++.++.|+
T Consensus 367 ~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~--t~e~i~~~l~~l~ 443 (453)
T 4ffc_A 367 EVDIIGEVRGRGAMLAIEIVK-PGTLEPDAALTKSIAAEALSQGVLILTCGTFGNVIRLLPPLVI--GDDLLDEGITALS 443 (453)
T ss_dssp HCSSEEEEEEETTEEEEEEBC-TTSCCBCHHHHHHHHHHHHHTTEECCEECTTSCEEEECCCTTC--CHHHHHHHHHHHH
T ss_pred hCCCeEEEEeeceEEEEEEec-CcccCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCC--CHHHHHHHHHHHH
Confidence 478889999999999999976 4444443322333332222233433332 233332222111 2666777788888
Q ss_pred HHHHHH
Q psy6205 80 DLIEAM 85 (224)
Q Consensus 80 ~~~~~~ 85 (224)
+.++.+
T Consensus 444 ~~l~~~ 449 (453)
T 4ffc_A 444 DIIRAK 449 (453)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877654
No 234
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=86.99 E-value=0.4 Score=41.49 Aligned_cols=29 Identities=52% Similarity=0.983 Sum_probs=23.8
Q ss_pred CCCCcceeeccCCceeEEEEeecCCCCCC
Q psy6205 2 ARYPLIGDVRGIGLFVGVELVTCRKQKTP 30 (224)
Q Consensus 2 ~~~p~v~~vRg~Gl~~gielv~~~~t~~p 30 (224)
.++|.+.++|+.|+|.+++++.+..+..+
T Consensus 363 ~~~~~~~~~~~~g~~~~i~~~~~~~~~~~ 391 (452)
T 3n5m_A 363 GEHPLVGDIRGKGLLVGIELVNDKETKEP 391 (452)
T ss_dssp TTCTTEEEEEESSSCEEEEEEEETTTTEE
T ss_pred hcCCCeEEEEEEEEEEEEEEecCCcccCC
Confidence 45788999999999999999877665544
No 235
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=86.88 E-value=1.8 Score=38.86 Aligned_cols=79 Identities=13% Similarity=-0.003 Sum_probs=44.7
Q ss_pred CCceEEEEccccCCCCcccCCHHHHHHHHHH--------------HHhCCccccccchhhhhcCCCCCCchhccccccc-
Q psy6205 90 KRPCAFFAESLQSCGGQIIPPANYLREVYKH--------------VQVGFGRVGTHWWAFQLQGDDIIPDIVTVGKPMG- 154 (224)
Q Consensus 90 ~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~--------------v~tG~GrtG~~~~~~~~~g~~v~pDi~~~~K~l~- 154 (224)
.++.+|++...+.-.|.+.+. +.++++.++ +...|..... .......+ ....+.++||.+|
T Consensus 244 ~~~k~v~l~~p~NPtG~~~~~-~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~~-s~~~~~~~--~~i~~~S~SK~~g~ 319 (546)
T 2zy4_A 244 PAIKIFFCVNPSNPPSVKMDQ-RSLERVRNIVAEHRPDLMILTDDVYGTFADDFQ-SLFAICPE--NTLLVYSFSKYFGA 319 (546)
T ss_dssp TTEEEEEEESSCSSSCBCCCH-HHHHHHHHHHHHTCTTCEEEEECTTGGGSTTCC-CHHHHCGG--GEEEEEESTTTTTC
T ss_pred CCCeEEEEECCCCCCCccCCH-HHHHHHHHHHHhccCCcEEEEeCcchhhcccCc-CHHHhCCC--CEEEEEeCccccCC
Confidence 356777776555557766554 445555443 4444432221 11110001 1122457999997
Q ss_pred CCcccccceecHH-HHHhh
Q psy6205 155 NGHPVAAVITTKE-IAKSF 172 (224)
Q Consensus 155 ~G~p~~av~~~~~-i~~~~ 172 (224)
.|+.+|.++++++ +++.+
T Consensus 320 ~GlRiG~~~~~~~~l~~~l 338 (546)
T 2zy4_A 320 TGWRLGVVAAHQQNVFDLA 338 (546)
T ss_dssp GGGCEEEEEEESSCHHHHH
T ss_pred CCcceEEEEECCHHHHHHH
Confidence 6899999999875 76665
No 236
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=86.41 E-value=1.8 Score=36.59 Aligned_cols=77 Identities=13% Similarity=0.141 Sum_probs=49.9
Q ss_pred Cchhccc----ccccCCccccccee-cHHHHHhhhc---CC-------cccccCCCCcHHHHHHHHHHHHHHhhhhHHHH
Q psy6205 144 PDIVTVG----KPMGNGHPVAAVIT-TKEIAKSFQE---TG-------VEYFNTYGGNPVSCAVANAVMEVLETENLREH 208 (224)
Q Consensus 144 pDi~~~~----K~l~~G~p~~av~~-~~~i~~~~~~---~~-------~~~~~T~~~~p~~~aaa~a~l~~~~~~~l~~~ 208 (224)
.|+.++| |.+++| .-|++++ ++++.+.+.. .+ ...+..+.-+++.++.+++.|+.+++ ..++
T Consensus 180 ~d~~~~S~~~~K~l~~g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l~~--~~~~ 256 (377)
T 3ju7_A 180 SGMIIYSFHATKPFGIG-EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKKWDD--KLKE 256 (377)
T ss_dssp SSEEEEECBTTSSSCCB-SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHTHHH--HHHH
T ss_pred CcEEEEECCCCCcCCCC-CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHHHHH--HHHH
Confidence 5777776 999865 2344554 5666655432 11 01234567788999988888877643 5667
Q ss_pred HHHHHHHHHHhhhhc
Q psy6205 209 ALDVGNQLHTPKKEN 223 (224)
Q Consensus 209 ~~~~g~~l~~~l~~l 223 (224)
.+++.+++.+.|+++
T Consensus 257 ~~~~~~~~~~~L~~~ 271 (377)
T 3ju7_A 257 RTRISEWYKQLLQSN 271 (377)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCC
Confidence 777777777777654
No 237
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=85.93 E-value=2.4 Score=36.59 Aligned_cols=80 Identities=9% Similarity=-0.131 Sum_probs=41.9
Q ss_pred Cchhccc--ccccCCcccccceecHH-HH-HhhhcCCcccc-----cCC--CCcHHHHHHHHHHHHHHhh---hhHHHHH
Q psy6205 144 PDIVTVG--KPMGNGHPVAAVITTKE-IA-KSFQETGVEYF-----NTY--GGNPVSCAVANAVMEVLET---ENLREHA 209 (224)
Q Consensus 144 pDi~~~~--K~l~~G~p~~av~~~~~-i~-~~~~~~~~~~~-----~T~--~~~p~~~aaa~a~l~~~~~---~~l~~~~ 209 (224)
.|+++++ |-+.+|..+|+++++++ +. +.+........ .+. +-+.....+..++|+.+.. ++..++.
T Consensus 253 ~d~~~~~~hK~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~lg~~g~~~~~~~~ 332 (452)
T 2dgk_A 253 VKSISASGHKFGLAPLGCGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNAS 332 (452)
T ss_dssp EEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEECcccccCCCCCeEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 5666654 85556677888999753 32 43321100000 011 1111122333344554432 3567778
Q ss_pred HHHHHHHHHhhhhc
Q psy6205 210 LDVGNQLHTPKKEN 223 (224)
Q Consensus 210 ~~~g~~l~~~l~~l 223 (224)
.++.++|.+.|+++
T Consensus 333 ~~~a~~l~~~L~~~ 346 (452)
T 2dgk_A 333 YQVAAYLADEIAKL 346 (452)
T ss_dssp HHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhC
Confidence 88899999988875
No 238
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=85.65 E-value=0.58 Score=40.63 Aligned_cols=78 Identities=22% Similarity=0.282 Sum_probs=41.5
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCC---CccccCCCCCCCCCChhHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPC---PDVYRGKYPADKYPDEDLGVKYAQDVQ 79 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~---P~~yr~~~~~~~~~~~~~~~~~~~~l~ 79 (224)
++|.+.++||.|+|.+++++. ..++.|.......+.......++...+. .++.|...+... +++..++.++.|+
T Consensus 369 ~~~~~~~~~~~G~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~--t~e~i~~~l~~l~ 445 (451)
T 3oks_A 369 EDDRIGDVRGRGAMIAMELVK-AGTTEPDADLTKALCAGAHAAGVIVLSCGTYGNVVRFLPPLSI--GDDLLNEGLDVLE 445 (451)
T ss_dssp HCTTEEEEEEETTEEEEEEBS-TTSCCBCHHHHHHHHHHHHHTTEECEEECTTSCEEEECCCTTC--CHHHHHHHHHHHH
T ss_pred hCCCeEEEEEeeEEEEEEEec-CccCCCCHHHHHHHHHHHHhCCcEEecCCCCCCEEEEECCCCC--CHHHHHHHHHHHH
Confidence 478889999999999999976 4444443322222332222233433332 233333222111 2555666666666
Q ss_pred HHHH
Q psy6205 80 DLIE 83 (224)
Q Consensus 80 ~~~~ 83 (224)
+.++
T Consensus 446 ~~l~ 449 (451)
T 3oks_A 446 EVLR 449 (451)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6554
No 239
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=84.47 E-value=0.71 Score=40.29 Aligned_cols=72 Identities=13% Similarity=-0.018 Sum_probs=41.1
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCCCccccCCCCCCCCCChhHHHHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPCPDVYRGKYPADKYPDEDLGVKYAQDVQDLI 82 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~P~~yr~~~~~~~~~~~~~~~~~~~~l~~~~ 82 (224)
++|.|.++|+.|+|.++++..... +..+.......++...+..++.|...+... +++..++.++.|++.+
T Consensus 381 ~~~~v~~vr~~G~~~~i~l~~~~~--------~~~~~~~l~~~Gv~v~~~~~~lRi~p~~~~--t~eei~~~l~~L~~~l 450 (457)
T 3tfu_A 381 ALPAVTDVRVCGAIGVIECDRPVD--------LAVATPAALDRGVWLRPFRNLVYAMPPYIC--TPAEITQITSAMVEVA 450 (457)
T ss_dssp GSTTEEEEEECSSCEEEEESSCCC--------HHHHHHHHHHTTEECCCBTTEEEECCCTTC--CHHHHHHHHHHHHHHH
T ss_pred cCCCeeeeecCCeEEEEEECCccc--------HHHHHHHHHHCCeEEEecCCEEEEECCCCC--CHHHHHHHHHHHHHHH
Confidence 478899999999999999854211 111222212224444444454453322111 2666777778888777
Q ss_pred HH
Q psy6205 83 EA 84 (224)
Q Consensus 83 ~~ 84 (224)
+.
T Consensus 451 ~~ 452 (457)
T 3tfu_A 451 RL 452 (457)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 240
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=81.30 E-value=4.5 Score=35.62 Aligned_cols=81 Identities=10% Similarity=-0.083 Sum_probs=43.0
Q ss_pred Cchhc--ccccccCCcccccceecH-HHH-Hhhhc--CC-----cccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHH
Q psy6205 144 PDIVT--VGKPMGNGHPVAAVITTK-EIA-KSFQE--TG-----VEYFNTYGGNPVSCAVANAVMEVLET---ENLREHA 209 (224)
Q Consensus 144 pDi~~--~~K~l~~G~p~~av~~~~-~i~-~~~~~--~~-----~~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~ 209 (224)
.|.++ ..|.+.++.-+|+++.++ +.. +.+.. .. ..+...++-+....++..++|+.+.. ....++.
T Consensus 268 ~D~v~~s~hK~l~~p~g~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~~g~~~~~~~~ 347 (502)
T 3hbx_A 268 VKSINVSGHKYGLVYAGIGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGHEGYRNVMENC 347 (502)
T ss_dssp EEEEEEETTTTTCCCSSCEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEECcccccCCCCCeEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45553 356665556667777753 332 22211 10 01111133333344555566666643 3567778
Q ss_pred HHHHHHHHHhhhhcC
Q psy6205 210 LDVGNQLHTPKKENN 224 (224)
Q Consensus 210 ~~~g~~l~~~l~~l~ 224 (224)
.++.++|.+.|++++
T Consensus 348 ~~~a~~l~~~L~~~~ 362 (502)
T 3hbx_A 348 RENMIVLREGLEKTE 362 (502)
T ss_dssp HHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhCC
Confidence 888999999998753
No 241
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=76.07 E-value=18 Score=30.82 Aligned_cols=141 Identities=10% Similarity=0.024 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccc-cCCCCcccCCHHHHHHHHHH------------HHhCCcccc--ccchhhhhcC
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESL-QSCGGQIIPPANYLREVYKH------------VQVGFGRVG--THWWAFQLQG 139 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv-~~~~G~~~~~~~~l~~~~~~------------v~tG~GrtG--~~~~~~~~~g 139 (224)
+++|++.+.. .+ +..++++-|- +.-.|... +++-++++.++ +..+|...+ ........+.
T Consensus 161 ~~~l~~~l~~---~~-~~~~i~l~~~~~NPTG~~~-s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~ 235 (405)
T 3k7y_A 161 YDLFLNDLRN---IP-NGSSVILQISCYNPCSVNI-EEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFE 235 (405)
T ss_dssp HHHHHHHHHH---SC-SSCEEEECCSSCTTTCCCC-CHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHH
T ss_pred HHHHHHHHHh---CC-CCeEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHH
Confidence 4555555542 22 3456777654 45577654 55555555555 434442111 0011111221
Q ss_pred CCCCCchh---ccccccc-CCccccccee---cHHHHHhhhcCC-cccccCCCC-cHHHHHHHHHHHHH------Hhh--
Q psy6205 140 DDIIPDIV---TVGKPMG-NGHPVAAVIT---TKEIAKSFQETG-VEYFNTYGG-NPVSCAVANAVMEV------LET-- 202 (224)
Q Consensus 140 ~~v~pDi~---~~~K~l~-~G~p~~av~~---~~~i~~~~~~~~-~~~~~T~~~-~p~~~aaa~a~l~~------~~~-- 202 (224)
+..+.++ ++||.++ .|+-+|.+++ ++++.+.+...- .....+++. +.++.+++.+.|+. +.+
T Consensus 236 -~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l 314 (405)
T 3k7y_A 236 -EKNIAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKEL 314 (405)
T ss_dssp -TTTCCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred -hcCCcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 0223333 6899999 7998998753 677665543210 011234433 44555555555542 111
Q ss_pred hhHHHHHHHHHHHHHHhhh
Q psy6205 203 ENLREHALDVGNQLHTPKK 221 (224)
Q Consensus 203 ~~l~~~~~~~g~~l~~~l~ 221 (224)
....+++++.=+++.+.|+
T Consensus 315 ~~~~~~~~~~R~~l~~~L~ 333 (405)
T 3k7y_A 315 SQLSQRITNNRILFFNKLE 333 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 1234445666666667666
No 242
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=75.20 E-value=2.6 Score=35.92 Aligned_cols=20 Identities=50% Similarity=0.883 Sum_probs=18.0
Q ss_pred CCCcceeeccCCceeEEEEe
Q psy6205 3 RYPLIGDVRGIGLFVGVELV 22 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv 22 (224)
++|.+.++|+.|+|.++++.
T Consensus 339 ~~~~~~~~~~~g~~~~~~~~ 358 (430)
T 3i4j_A 339 RFPQMMQVRGTGLLLGVVLG 358 (430)
T ss_dssp HCTTEEEEEEETTEEEEEEC
T ss_pred hCCCeEEEEEEEEEEEEEec
Confidence 46888999999999999997
No 243
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=75.07 E-value=1.8 Score=36.99 Aligned_cols=81 Identities=30% Similarity=0.308 Sum_probs=44.9
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCC---CccccCCCCCCCCCChhHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPC---PDVYRGKYPADKYPDEDLGVKYAQDVQ 79 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~---P~~yr~~~~~~~~~~~~~~~~~~~~l~ 79 (224)
.+|.+.++|+.|+|.++++..+..+..|.......+.......++...+. +++.|..++... +++..++.++.|+
T Consensus 342 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~~iRi~~~~~~--t~e~i~~~l~~l~ 419 (439)
T 3dxv_A 342 RHPLIGDIRGRGLACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGMNGNVLEFTPPLTI--TETDIHKALDLLD 419 (439)
T ss_dssp HCTTEEEEEEETTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEESTTSCEEEECCCTTC--CHHHHHHHHHHHH
T ss_pred hCCCeEEEEEEEEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCCC--CHHHHHHHHHHHH
Confidence 36778899999999999998766554443222222222222223333322 233443222111 2566677778888
Q ss_pred HHHHHH
Q psy6205 80 DLIEAM 85 (224)
Q Consensus 80 ~~~~~~ 85 (224)
+.++.+
T Consensus 420 ~~l~~~ 425 (439)
T 3dxv_A 420 RAFSEL 425 (439)
T ss_dssp HHHHTG
T ss_pred HHHHHH
Confidence 777654
No 244
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=70.13 E-value=22 Score=29.85 Aligned_cols=80 Identities=11% Similarity=0.051 Sum_probs=52.0
Q ss_pred Cchhcc--cccccCCcccccceecHHHHHhhhc-C-Ccc--------cccCC-CCcHHHHHHHHHHHHHHhhh----hHH
Q psy6205 144 PDIVTV--GKPMGNGHPVAAVITTKEIAKSFQE-T-GVE--------YFNTY-GGNPVSCAVANAVMEVLETE----NLR 206 (224)
Q Consensus 144 pDi~~~--~K~l~~G~p~~av~~~~~i~~~~~~-~-~~~--------~~~T~-~~~p~~~aaa~a~l~~~~~~----~l~ 206 (224)
.|++++ =|.+| ---+|++..++++.+.+.+ . ... ...++ +-|-.+..+..++|+++++. +..
T Consensus 185 ~d~~~~s~~K~~g-p~G~g~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~ 263 (361)
T 3m5u_A 185 IALFYGGVQKNAG-ISGLSCIFIRKDMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVH 263 (361)
T ss_dssp EEEEEEETTTTSS-CTTCEEEEEEHHHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHH
T ss_pred CCEEEEechhccC-CCccEEEEEcHHHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHH
Confidence 465554 37773 1236778999999876643 1 100 01232 23455667777899998654 567
Q ss_pred HHHHHHHHHHHHhhhhcC
Q psy6205 207 EHALDVGNQLHTPKKENN 224 (224)
Q Consensus 207 ~~~~~~g~~l~~~l~~l~ 224 (224)
++.+++.++|+++|++++
T Consensus 264 ~~~~~l~~~l~~~L~~~~ 281 (361)
T 3m5u_A 264 EKNSQKATMLYECIDLSN 281 (361)
T ss_dssp HHHHHHHHHHHHHHHTST
T ss_pred HHHHHHHHHHHHHHHHCC
Confidence 788899999999998763
No 245
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=69.10 E-value=27 Score=30.97 Aligned_cols=135 Identities=11% Similarity=0.026 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccc-----hhhhhcCCCC-C
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHW-----WAFQLQGDDI-I 143 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~-----~~~~~~g~~v-~ 143 (224)
++++++.|++. +.+.+++|++.|-.-.++...+-++..+.+.+. |--.+| .++ +..+.+. . .
T Consensus 202 ~e~le~aI~e~--ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhG---ah~~~~~~lp~sA~~--~Gr 274 (501)
T 3hl2_A 202 LKAVEAKVQEL--GPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYG---VQSSKCMHLIQQGAR--VGR 274 (501)
T ss_dssp HHHHHHHHHHH--CGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTC---TTCHHHHHHHHHHHH--HSC
T ss_pred HHHHHHHHHhc--CCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcch---hhhhhhhhhHHHHHh--cCC
Confidence 56778888753 347888888876322233445656666666666 211111 111 0111121 2 3
Q ss_pred Cchhccc-ccccCC-ccccccee---cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHH
Q psy6205 144 PDIVTVG-KPMGNG-HPVAAVIT---TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQ 215 (224)
Q Consensus 144 pDi~~~~-K~l~~G-~p~~av~~---~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~ 215 (224)
.|+++.| +- .+ .|++.-+. ++++++.+.. .+-.|-++.|.. ....+|..+-. .+++++..++.++
T Consensus 275 AD~vVqS~HK--~llvpIGG~ii~~~d~e~l~~~~~---~yPGr~S~Spsl--dl~~tLL~lGr~Gy~~ll~e~~ela~~ 347 (501)
T 3hl2_A 275 IDAFVQSLDK--NFMVPVGGAIIAGFNDSFIQEISK---MYPGRASASPSL--DVLITLLSLGSNGYKKLLKERKEMFSY 347 (501)
T ss_dssp CCEEEEEHHH--HHCCCSSCEEEEESCHHHHHHHHH---TSCSCBCSHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEecccc--cceeecCceEEEeCCHHHHHHHHH---hCCCCCCCcHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7877765 11 23 35554333 6667776543 233455555544 23344444422 4688888899999
Q ss_pred HHHhhhhc
Q psy6205 216 LHTPKKEN 223 (224)
Q Consensus 216 l~~~l~~l 223 (224)
|+++|+++
T Consensus 348 L~~~L~~l 355 (501)
T 3hl2_A 348 LSNQIKKL 355 (501)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999874
No 246
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=71.59 E-value=1 Score=39.65 Aligned_cols=21 Identities=10% Similarity=0.116 Sum_probs=18.1
Q ss_pred CCCcceeeccCCceeEEEEee
Q psy6205 3 RYPLIGDVRGIGLFVGVELVT 23 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~ 23 (224)
+|+.+.++||.|+|.++++..
T Consensus 378 ~~~~~~~v~g~G~~~~i~~~~ 398 (465)
T 2yky_A 378 ENQAPLQFTGLGSLGTIHFSR 398 (465)
Confidence 467778999999999999974
No 247
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=66.93 E-value=5.3 Score=33.92 Aligned_cols=22 Identities=59% Similarity=1.004 Sum_probs=18.4
Q ss_pred CCcceeeccCCceeEEEEeecC
Q psy6205 4 YPLIGDVRGIGLFVGVELVTCR 25 (224)
Q Consensus 4 ~p~v~~vRg~Gl~~gielv~~~ 25 (224)
+|.+.++|+.|+|.++++..+.
T Consensus 348 ~~~~~~~~~~g~~~~i~~~~~~ 369 (433)
T 1zod_A 348 FDCIGDVRGRGLLLGVEIVKDR 369 (433)
T ss_dssp CTTEEEEEEETTEEEEEEEEET
T ss_pred CCCeEEEEEEEEEEEEEEecCc
Confidence 5777899999999999997643
No 248
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=66.30 E-value=4.1 Score=38.03 Aligned_cols=42 Identities=10% Similarity=-0.103 Sum_probs=33.9
Q ss_pred cCCCCcHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHhhhh
Q psy6205 181 NTYGGNPVSCAVANAVMEVLET---ENLREHALDVGNQLHTPKKE 222 (224)
Q Consensus 181 ~T~~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~g~~l~~~l~~ 222 (224)
.|.+-++..+++..++++++.. +++.+++.++.++++++|++
T Consensus 393 ~stsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~ 437 (730)
T 1c4k_A 393 MSTSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIK 437 (730)
T ss_dssp SCSSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhh
Confidence 4556778888888888888864 46788899999999999976
No 249
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=55.79 E-value=19 Score=30.57 Aligned_cols=73 Identities=14% Similarity=0.089 Sum_probs=44.3
Q ss_pred cccccCCcccccceecHHHHHhhhcCCcc---------cccCCC-CcHHHHHHHHHHHHHHhhh----hHHHHHHHHHHH
Q psy6205 150 GKPMGNGHPVAAVITTKEIAKSFQETGVE---------YFNTYG-GNPVSCAVANAVMEVLETE----NLREHALDVGNQ 215 (224)
Q Consensus 150 ~K~l~~G~p~~av~~~~~i~~~~~~~~~~---------~~~T~~-~~p~~~aaa~a~l~~~~~~----~l~~~~~~~g~~ 215 (224)
=|.+| ---+|.+..++++.+.+.+.... ...+++ -|-.+..+..++|++++++ ++.++.+++.++
T Consensus 206 ~K~~g-p~G~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~ 284 (377)
T 3e77_A 206 QKNVG-SAGVTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQT 284 (377)
T ss_dssp GGTTS-CTTCEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred ccccC-CCccEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 36663 22356677787765433211000 012332 3444666677889988654 577788899999
Q ss_pred HHHhhhhc
Q psy6205 216 LHTPKKEN 223 (224)
Q Consensus 216 l~~~l~~l 223 (224)
|+++|+++
T Consensus 285 l~~~L~~~ 292 (377)
T 3e77_A 285 IYEIIDNS 292 (377)
T ss_dssp HHHHHHTS
T ss_pred HHHHHHhc
Confidence 99999875
No 250
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=55.22 E-value=10 Score=32.37 Aligned_cols=74 Identities=12% Similarity=0.095 Sum_probs=38.9
Q ss_pred CCCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCC-CccccCCCCCCCCCChhHHHHHHHHHHHH
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPC-PDVYRGKYPADKYPDEDLGVKYAQDVQDL 81 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~-P~~yr~~~~~~~~~~~~~~~~~~~~l~~~ 81 (224)
.+|.+.++|+.|+|.++++..+. .... .+.......++...+. +++.|...+... +++..++.++.|++.
T Consensus 355 ~~~~~~~~~~~g~~~~i~~~~~~---~~~~----~~~~~l~~~Gv~v~~~~~~~iRi~~~~~~--t~e~i~~~l~~l~~~ 425 (433)
T 1z7d_A 355 DSKIVRDVRGKGLLCAIEFKNEL---VNVL----DICLKLKENGLITRDVHDKTIRLTPPLCI--TKEQLDECTEIIVKT 425 (433)
T ss_dssp TCTTEEEEEEETTEEEEEECTTT---CCHH----HHHHHHHHTTEECCEETTTEEEECCCTTC--CHHHHHHHHHHHHHH
T ss_pred hCCCeEEEEeeeeEEEEEEccCh---hHHH----HHHHHHHHCCeEEecCCCCEEEEECCcCC--CHHHHHHHHHHHHHH
Confidence 46878899999999999985321 0011 1111111123333222 334443222111 266677777878777
Q ss_pred HHHH
Q psy6205 82 IEAM 85 (224)
Q Consensus 82 ~~~~ 85 (224)
++.+
T Consensus 426 l~~~ 429 (433)
T 1z7d_A 426 VKFF 429 (433)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6653
No 251
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=44.77 E-value=18 Score=30.89 Aligned_cols=20 Identities=25% Similarity=0.444 Sum_probs=17.2
Q ss_pred CCcceeeccCCceeEEEEee
Q psy6205 4 YPLIGDVRGIGLFVGVELVT 23 (224)
Q Consensus 4 ~p~v~~vRg~Gl~~gielv~ 23 (224)
+|.++++|+.|+|.++++..
T Consensus 365 ~~~~~~~~~~g~~~~v~l~~ 384 (439)
T 2oat_A 365 SDVVTAVRGKGLLNAIVIKE 384 (439)
T ss_dssp TTTEEEEEEETTEEEEEECC
T ss_pred CCCcEEEEeeeeEEEEEEec
Confidence 57778999999999999864
No 252
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=42.81 E-value=93 Score=27.07 Aligned_cols=138 Identities=12% Similarity=0.003 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHccCCCCceEEEEccccCCCCcccCCHHHHHHHHHH-----HHhCCccccccch---hhhhcCCCC-CCc
Q psy6205 75 AQDVQDLIEAMGRNGKRPCAFFAESLQSCGGQIIPPANYLREVYKH-----VQVGFGRVGTHWW---AFQLQGDDI-IPD 145 (224)
Q Consensus 75 ~~~l~~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~-----v~tG~GrtG~~~~---~~~~~g~~v-~pD 145 (224)
.+.|++.|++. ..+.+++|++.|-.-..|.+.+-++..+.+++. |--.+|=.-. +. ..+.+. . ..|
T Consensus 184 ~~~le~aI~~~--~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~-~~~~l~~~a~~--~~~AD 258 (450)
T 3bc8_A 184 LKAVEAKIQEL--GPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSS-KCMHLIQQGAR--VGRID 258 (450)
T ss_dssp HHHHHHHHHHH--CGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCH-HHHHHHHHHHH--HSCCC
T ss_pred HHHHHHHHHhc--CCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhh-hhHhHHHHHhc--ccCCC
Confidence 56778777653 225788999987544445677777777777777 3222321000 00 001110 1 368
Q ss_pred hhccc--ccccCCccccccee-cHHHHHhhhcCCcccccCCCCcHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHh
Q psy6205 146 IVTVG--KPMGNGHPVAAVIT-TKEIAKSFQETGVEYFNTYGGNPVSCAVANAVMEVLETE---NLREHALDVGNQLHTP 219 (224)
Q Consensus 146 i~~~~--K~l~~G~p~~av~~-~~~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~l~~~~~~---~l~~~~~~~g~~l~~~ 219 (224)
+++++ |-+..-+.-+.+.. +++..+.+.. .+..+-+.+|. .... .++..+-++ +++++..++.++|+++
T Consensus 259 ~~v~S~HK~l~a~~~~~~l~~rd~~~~~~~~~---~~~g~~s~Sps-L~l~-~~l~~~G~~g~~~~i~~~~~~a~~l~~~ 333 (450)
T 3bc8_A 259 AFVQSLDKNFMVPVGGAIIAGFNEPFIQDISK---MYPGRASASPS-LDVL-ITLLSLGCSGYRKLLKERKEMFVYLSTQ 333 (450)
T ss_dssp EEEEEHHHHHSCCSSCEEEEESCHHHHHHHHH---HSCSCBCSHHH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCccCCCchhccEEEEecCHHHHHHHHH---HhhcCCcccHH-HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88765 43332233344554 5555555432 12122223453 2222 222222222 2344446777888887
Q ss_pred hhh
Q psy6205 220 KKE 222 (224)
Q Consensus 220 l~~ 222 (224)
|++
T Consensus 334 l~~ 336 (450)
T 3bc8_A 334 LKK 336 (450)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
No 253
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=42.37 E-value=26 Score=17.19 Aligned_cols=15 Identities=27% Similarity=0.452 Sum_probs=9.7
Q ss_pred hhHHHHHHHHHHHHH
Q psy6205 203 ENLREHALDVGNQLH 217 (224)
Q Consensus 203 ~~l~~~~~~~g~~l~ 217 (224)
++++++++.+-+.|+
T Consensus 11 edlqerlrklrkklr 25 (27)
T 3twe_A 11 EDLQERLRKLRKKLR 25 (27)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc
Confidence 567777776655554
No 254
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=38.99 E-value=30 Score=29.14 Aligned_cols=21 Identities=10% Similarity=0.176 Sum_probs=18.0
Q ss_pred CCcceeeccCCceeEEEEeec
Q psy6205 4 YPLIGDVRGIGLFVGVELVTC 24 (224)
Q Consensus 4 ~p~v~~vRg~Gl~~gielv~~ 24 (224)
++.+.++|+.|++.++++...
T Consensus 344 ~~~~~~~~~~g~~~~~~~~~~ 364 (429)
T 3k28_A 344 HGIPHHINRAGSMIGIFFTDE 364 (429)
T ss_dssp TTCCCEEEEETTEEEEESSSS
T ss_pred CCCCEEEEeeccEEEEEEecC
Confidence 677889999999999998643
No 255
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=37.25 E-value=27 Score=29.31 Aligned_cols=20 Identities=5% Similarity=-0.142 Sum_probs=16.6
Q ss_pred CCcceeeccCCceeEEEEee
Q psy6205 4 YPLIGDVRGIGLFVGVELVT 23 (224)
Q Consensus 4 ~p~v~~vRg~Gl~~gielv~ 23 (224)
++.+.++|+.|+++++++..
T Consensus 344 ~~~~~~~~~~g~~~~~~~~~ 363 (427)
T 3fq8_A 344 TGHAACGGQVSGMFGFFFTE 363 (427)
T ss_dssp TTCCCEEEEETTEEEEESSS
T ss_pred CCCCeEEEEeeeEEEEEEec
Confidence 45567899999999999864
No 256
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=36.62 E-value=26 Score=29.59 Aligned_cols=20 Identities=40% Similarity=0.976 Sum_probs=16.8
Q ss_pred CCcceeeccCCceeEEEEee
Q psy6205 4 YPLIGDVRGIGLFVGVELVT 23 (224)
Q Consensus 4 ~p~v~~vRg~Gl~~gielv~ 23 (224)
+|.+.++|+.|+|.++++..
T Consensus 344 ~~~~~~~~~~g~~~~v~~~~ 363 (420)
T 2pb2_A 344 FDIFSDIRGMGLLIGAELKP 363 (420)
T ss_dssp HCCEEEEEEETTEEEEEECG
T ss_pred CCCeEEEEecceEEEEEECC
Confidence 47778899999999999853
No 257
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=36.61 E-value=24 Score=29.96 Aligned_cols=22 Identities=18% Similarity=0.256 Sum_probs=18.4
Q ss_pred CCCcceeeccCCceeEEEEeec
Q psy6205 3 RYPLIGDVRGIGLFVGVELVTC 24 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~~ 24 (224)
++|.+.++|+.|+|.++++..+
T Consensus 370 ~~~~~~~~~~~g~~~~i~~~~~ 391 (449)
T 3a8u_X 370 GAKNVIDIRNFGLAGAIQIAPR 391 (449)
T ss_dssp TSTTEEEEEEETTEEEEEECCB
T ss_pred cCCCeEEEeeeEEEEEEEEecC
Confidence 4677888999999999999654
No 258
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=36.21 E-value=2e+02 Score=24.40 Aligned_cols=76 Identities=11% Similarity=0.074 Sum_probs=36.6
Q ss_pred cccccccC-CcccccceecHHHHHhhhc---C-CcccccCCCCcHH-HHHHHHHHHHH------Hh--hhhHHHHHHHHH
Q psy6205 148 TVGKPMGN-GHPVAAVITTKEIAKSFQE---T-GVEYFNTYGGNPV-SCAVANAVMEV------LE--TENLREHALDVG 213 (224)
Q Consensus 148 ~~~K~l~~-G~p~~av~~~~~i~~~~~~---~-~~~~~~T~~~~p~-~~aaa~a~l~~------~~--~~~l~~~~~~~g 213 (224)
.+||.++- |.-+|++++..+..+.... . .....++++..|. +..++...|.- ++ -+...++++++=
T Consensus 262 s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~m~~r~~~~R 341 (420)
T 4h51_A 262 SFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSAMAERIRTMR 341 (420)
T ss_dssp ECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 68998873 7777877764433332211 0 0011245544443 33333333321 11 123455566666
Q ss_pred HHHHHhhhhc
Q psy6205 214 NQLHTPKKEN 223 (224)
Q Consensus 214 ~~l~~~l~~l 223 (224)
+.|.+.|+++
T Consensus 342 ~~l~~~L~~~ 351 (420)
T 4h51_A 342 RTVYDELLRL 351 (420)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 6677777664
No 259
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=35.94 E-value=33 Score=28.61 Aligned_cols=79 Identities=20% Similarity=0.315 Sum_probs=38.7
Q ss_pred CCcceeeccCCceeEEEEeecCCCCCCccccchhhhccCCCcceeecCC---CccccCCCCCCCCCChhHHHHHHHHHHH
Q psy6205 4 YPLIGDVRGIGLFVGVELVTCRKQKTPATSEAQHVITRPPVRMSTEAPC---PDVYRGKYPADKYPDEDLGVKYAQDVQD 80 (224)
Q Consensus 4 ~p~v~~vRg~Gl~~gielv~~~~t~~p~~~~a~~l~~~~~~~~~~~vp~---P~~yr~~~~~~~~~~~~~~~~~~~~l~~ 80 (224)
+|.+..+++.|.|..+++.....++.|.......+.......++...+. +++.|..+... .+++..++.++.|++
T Consensus 342 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~~~iRi~~~~~--~~~~~i~~~~~~l~~ 419 (426)
T 1sff_A 342 HPEIGDVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLT--IEDAQIRQGLEIISQ 419 (426)
T ss_dssp CTTEEEEEEETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHHTTEECEEESTTSCEEEECCCTT--CCHHHHHHHHHHHHH
T ss_pred CCCeEEEEEEEEEEEEEEecCccccCCChHHHHHHHHHHHHCCcEEecCCCCCCEEEEECCcc--CCHHHHHHHHHHHHH
Confidence 5667788999999999996433222221111111111111123332221 34444433211 125666677777777
Q ss_pred HHHH
Q psy6205 81 LIEA 84 (224)
Q Consensus 81 ~~~~ 84 (224)
.++.
T Consensus 420 ~l~~ 423 (426)
T 1sff_A 420 CFDE 423 (426)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6654
No 260
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=32.72 E-value=17 Score=31.48 Aligned_cols=19 Identities=42% Similarity=0.810 Sum_probs=16.0
Q ss_pred CC-cceeeccCCceeEEEEe
Q psy6205 4 YP-LIGDVRGIGLFVGVELV 22 (224)
Q Consensus 4 ~p-~v~~vRg~Gl~~gielv 22 (224)
+| .+.++|+.|+|.++++.
T Consensus 398 ~~~~v~~~~~~g~~~~~~~~ 417 (472)
T 1ohv_A 398 YPQFISRVRGRGTFCSFDTP 417 (472)
T ss_dssp CTTTCEEEEEETTEEEEECS
T ss_pred CCCcEEeecCCceEEEEEeC
Confidence 57 48899999999999874
No 261
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=32.29 E-value=42 Score=28.20 Aligned_cols=78 Identities=8% Similarity=-0.104 Sum_probs=39.4
Q ss_pred CCcceeeccCCceeEEEEeecCCCC-----CCccccchhhhccCCCcceeecCCC-ccccCCCCCCCCCChhHHHHHHHH
Q psy6205 4 YPLIGDVRGIGLFVGVELVTCRKQK-----TPATSEAQHVITRPPVRMSTEAPCP-DVYRGKYPADKYPDEDLGVKYAQD 77 (224)
Q Consensus 4 ~p~v~~vRg~Gl~~gielv~~~~t~-----~p~~~~a~~l~~~~~~~~~~~vp~P-~~yr~~~~~~~~~~~~~~~~~~~~ 77 (224)
++.+.++|+.|+|.++++.....+. .+.......+.......++...+.. +..|..+.. +++..++.++.
T Consensus 347 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~~rl~~~~----t~e~i~~~l~~ 422 (434)
T 3l44_A 347 HNIDITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLMLQEGVNLAPSKYEAWFLTTEH----TKEDIEYTIEA 422 (434)
T ss_dssp TTCCEEEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHHHTTEECCSSTTCCEECCTTC----CHHHHHHHHHH
T ss_pred CCCCEEEEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHHHHCCeEEeecCCCcEEEeccc----CHHHHHHHHHH
Confidence 5777899999999999995321100 0111111122222222334333332 222322211 36667777788
Q ss_pred HHHHHHHH
Q psy6205 78 VQDLIEAM 85 (224)
Q Consensus 78 l~~~~~~~ 85 (224)
|++.++.+
T Consensus 423 l~~~l~~~ 430 (434)
T 3l44_A 423 VGRAFAAL 430 (434)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88777654
No 262
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=31.49 E-value=1.3e+02 Score=25.28 Aligned_cols=73 Identities=11% Similarity=0.117 Sum_probs=42.3
Q ss_pred cccccCCcccccceecHHHHHhhhcCCcc---------cccCC-CCcHHHHHHHHHHHHHHhhh----hHHHHHHHHHHH
Q psy6205 150 GKPMGNGHPVAAVITTKEIAKSFQETGVE---------YFNTY-GGNPVSCAVANAVMEVLETE----NLREHALDVGNQ 215 (224)
Q Consensus 150 ~K~l~~G~p~~av~~~~~i~~~~~~~~~~---------~~~T~-~~~p~~~aaa~a~l~~~~~~----~l~~~~~~~g~~ 215 (224)
=|.+| -.-+|++.+++++.+.+.+.... ...++ +-|..+..+..++|+++.+. +..++.+++.++
T Consensus 221 hK~lG-P~G~g~l~v~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~ 299 (386)
T 3qm2_A 221 QKNIG-PAGLTLVIVREDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAEL 299 (386)
T ss_dssp TTTTC-CTTEEEEEEEGGGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ccccC-CCccEEEEECHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 46662 12256788888875433211000 01111 22334666777888888553 567788899999
Q ss_pred HHHhhhhc
Q psy6205 216 LHTPKKEN 223 (224)
Q Consensus 216 l~~~l~~l 223 (224)
|+++|+++
T Consensus 300 l~~~l~~~ 307 (386)
T 3qm2_A 300 LYGVIDNS 307 (386)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHC
Confidence 99999875
No 263
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=29.26 E-value=49 Score=29.19 Aligned_cols=75 Identities=19% Similarity=0.217 Sum_probs=39.5
Q ss_pred Cchhc--ccccccC---CcccccceecH---------------HHHHhhhcCCcccccCCCCcHHHHHHHHHH-H-HHHh
Q psy6205 144 PDIVT--VGKPMGN---GHPVAAVITTK---------------EIAKSFQETGVEYFNTYGGNPVSCAVANAV-M-EVLE 201 (224)
Q Consensus 144 pDi~~--~~K~l~~---G~p~~av~~~~---------------~i~~~~~~~~~~~~~T~~~~p~~~aaa~a~-l-~~~~ 201 (224)
.|+|| .=|.|.| |+ +++++ ++.+.+... .|-.+.+|+-.-.-||+|+ + +.++
T Consensus 257 ADvVTtTTHKTLrGPrGG~----Il~~~~~~~~~~k~~~~~~~~~~kkin~a--VFPg~qggp~~h~IAAkAVaf~Ea~~ 330 (490)
T 3ou5_A 257 ADIVTTTTHKTLRGARSGL----IFYRKGVKAVDPKTGREIPYTFEDRINFA--VFPSLQGGPHNHAIAAVAVALKQACT 330 (490)
T ss_dssp CSEEEEESSSTTCSCSCEE----EEEECSEEEECC--CCEEECCCHHHHHHH--HTTTTCSSCCHHHHHHHHHHHHHHHS
T ss_pred ceEEeccccccccCCCceE----EEeccccccccccccchhHHHHHHHHHhh--cCccccccchHHHHHHHHHHHHHHHh
Confidence 58885 5688864 44 55554 334444321 2223444433333333333 3 3343
Q ss_pred h--hhHHHHHHHHHHHHHHhhhhcC
Q psy6205 202 T--ENLREHALDVGNQLHTPKKENN 224 (224)
Q Consensus 202 ~--~~l~~~~~~~g~~l~~~l~~l~ 224 (224)
. ..+.+++-++.+.|.+.|.+.|
T Consensus 331 p~fk~Ya~qVv~NAkaLA~~L~~~G 355 (490)
T 3ou5_A 331 PMFREYSLQVLKNARAMADALLERG 355 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 2 3566777777777777776654
No 264
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=28.69 E-value=25 Score=29.13 Aligned_cols=21 Identities=19% Similarity=0.536 Sum_probs=17.7
Q ss_pred CCCcceeeccCCceeEEEEee
Q psy6205 3 RYPLIGDVRGIGLFVGVELVT 23 (224)
Q Consensus 3 ~~p~v~~vRg~Gl~~gielv~ 23 (224)
++|.+.++|+.|+|.++++..
T Consensus 322 ~~~~~~~~~~~g~~~~~~~~~ 342 (395)
T 3nx3_A 322 EFDFCKKRKGLGFMQGLSLDK 342 (395)
T ss_dssp HCTTEEEEEEETTEEEEEECT
T ss_pred hCCCeEEEEeEEEEEEEEeCC
Confidence 367788999999999999854
No 265
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=27.40 E-value=36 Score=28.67 Aligned_cols=20 Identities=5% Similarity=-0.062 Sum_probs=16.3
Q ss_pred CCcceeeccCCceeEEEEee
Q psy6205 4 YPLIGDVRGIGLFVGVELVT 23 (224)
Q Consensus 4 ~p~v~~vRg~Gl~~gielv~ 23 (224)
++.+.++|+.|+|.++++..
T Consensus 348 ~~~~~~~~~~g~~~~i~~~~ 367 (434)
T 2epj_A 348 TGLPYTINRVESMMQLFIGV 367 (434)
T ss_dssp HTCCEEEEEETTEEEEEETC
T ss_pred CCCcEEEEEeeeEEEEEEeC
Confidence 45567899999999999964
No 266
>1v9c_A Precorrin-8X methyl mutase; alpha-beta WIND, doubly wound sheet, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.20A {Thermus thermophilus} SCOP: c.23.17.1
Probab=25.82 E-value=80 Score=24.70 Aligned_cols=46 Identities=24% Similarity=0.393 Sum_probs=29.6
Q ss_pred CcccccceecHHHHHhhhcCCcccc---cCCCCcHHHHHHHHHHHHHHhh
Q psy6205 156 GHPVAAVITTKEIAKSFQETGVEYF---NTYGGNPVSCAVANAVMEVLET 202 (224)
Q Consensus 156 G~p~~av~~~~~i~~~~~~~~~~~~---~T~~~~p~~~aaa~a~l~~~~~ 202 (224)
|+|+|-|-. .|-.+.+.+.+..+. ++-+|++++.|+.++-+..+++
T Consensus 158 G~PVGFVga-aESKe~L~~~~vP~I~~~GrkGGS~vAaAivNALl~~~~~ 206 (218)
T 1v9c_A 158 GMPVGFVNV-LEAKRALMEAPVPWIVTEGRKGGSTLVVAALHALIRLAAD 206 (218)
T ss_dssp ECCCSSSSH-HHHHHHHTTSSSCEEEECTTCCCHHHHHHHHHHHHHHHHH
T ss_pred EeCCCccCH-HHHHHHHHhCCCCEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 456665544 333344443333333 7999999999999998866644
No 267
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=23.15 E-value=33 Score=28.83 Aligned_cols=21 Identities=14% Similarity=0.099 Sum_probs=17.8
Q ss_pred CCcceeeccCCceeEEEEeec
Q psy6205 4 YPLIGDVRGIGLFVGVELVTC 24 (224)
Q Consensus 4 ~p~v~~vRg~Gl~~gielv~~ 24 (224)
++.+.++|+.|+|.++++..+
T Consensus 345 ~~~~~~~~~~g~~~~~~~~~~ 365 (429)
T 4e77_A 345 ENIPLVVNHVGGMFGLFFTNA 365 (429)
T ss_dssp TTCCCEEEEETTEEEEECCSS
T ss_pred CCCceEEEEeeeEEEEEEccC
Confidence 577789999999999999643
No 268
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=22.18 E-value=55 Score=27.83 Aligned_cols=19 Identities=37% Similarity=0.653 Sum_probs=16.1
Q ss_pred CCc-ceeeccCCceeEEEEe
Q psy6205 4 YPL-IGDVRGIGLFVGVELV 22 (224)
Q Consensus 4 ~p~-v~~vRg~Gl~~gielv 22 (224)
+|. +.++|+.|+|.++++.
T Consensus 375 ~~~~~~~~~~~g~~~~~~~~ 394 (449)
T 2cjg_A 375 FPAVVLDPRGRGLMCAFSLP 394 (449)
T ss_dssp STTTSEEEEEETTEEEEECS
T ss_pred CCCceeeEeeccEEEEEEEC
Confidence 575 8899999999999874
No 269
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=21.87 E-value=42 Score=28.10 Aligned_cols=20 Identities=20% Similarity=0.195 Sum_probs=16.5
Q ss_pred CCcceeeccCCceeEEEEee
Q psy6205 4 YPLIGDVRGIGLFVGVELVT 23 (224)
Q Consensus 4 ~p~v~~vRg~Gl~~gielv~ 23 (224)
++.+.++|+.|+|.++++..
T Consensus 344 ~~~~~~~~~~g~~~~i~~~~ 363 (424)
T 2e7u_A 344 KGLPHTVNRVGSMITVFFTE 363 (424)
T ss_dssp TTCCCEEEEETTEEEEESSS
T ss_pred CCCceEEEeeceEEEEEEeC
Confidence 56667899999999999853
No 270
>3lwz_A 3-dehydroquinate dehydratase; AROQ, IDP90771, amino- acid biosynthesis, aromatic amino acid biosynthesis, lyase, structural genomics; 1.65A {Yersinia pestis}
Probab=21.40 E-value=56 Score=24.07 Aligned_cols=28 Identities=0% Similarity=-0.135 Sum_probs=16.9
Q ss_pred CCCceEEEEccccCCCCcccCCHHHHHHHHHH
Q psy6205 89 GKRPCAFFAESLQSCGGQIIPPANYLREVYKH 120 (224)
Q Consensus 89 ~~~iaavi~Epv~~~~G~~~~~~~~l~~~~~~ 120 (224)
.+++.+||+.| ++.-.-+-...+.|..+
T Consensus 71 ~~~~dgiiINp----gA~THtSvAlrDAl~~~ 98 (153)
T 3lwz_A 71 RGNTDFILINP----AAFTHTSVALRDALLGV 98 (153)
T ss_dssp TTTCSEEEEEC----GGGGGTCHHHHHHHHHH
T ss_pred hhcCceEEEcc----ccceechHHHHHHHHhc
Confidence 35677888888 23334555566666555
No 271
>2afr_A Cobalamin biosynthesis precorrin isomerase; 2.30A {Leptospira interrogans} PDB: 2afv_A*
Probab=21.36 E-value=83 Score=24.83 Aligned_cols=21 Identities=19% Similarity=0.415 Sum_probs=18.6
Q ss_pred cCCCCcHHHHHHHHHHHHHHh
Q psy6205 181 NTYGGNPVSCAVANAVMEVLE 201 (224)
Q Consensus 181 ~T~~~~p~~~aaa~a~l~~~~ 201 (224)
++-+|++++.|+.+|-+..++
T Consensus 198 GrkGGS~vAaAivNALl~~~~ 218 (231)
T 2afr_A 198 GRKGGSTIAVAILHALLLLSS 218 (231)
T ss_dssp SSCCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH
Confidence 899999999999999886664
Done!