BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6206
(83 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VU95|AGT2L_DROME Alanine--glyoxylate aminotransferase 2-like OS=Drosophila
melanogaster GN=CG8745 PE=2 SV=2
Length = 494
Score = 120 bits (302), Expect = 2e-27, Method: Composition-based stats.
Identities = 56/79 (70%), Positives = 62/79 (78%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDL 64
VGHCHP VV+A Q+A ++TNNRFLHD LV CAR L S +P+PLSVCFFVNSGSEANDL
Sbjct: 70 VGHCHPEVVRAGALQMATISTNNRFLHDELVQCARTLTSKMPEPLSVCFFVNSGSEANDL 129
Query: 65 ALRLARVHTNNDDVITQDQ 83
ALRLAR T DVIT D
Sbjct: 130 ALRLARNFTKRQDVITLDH 148
>sp|Q5E9S4|AT2L1_BOVIN Ethanolamine-phosphate phospho-lyase OS=Bos taurus GN=AGXT2L1 PE=2
SV=1
Length = 497
Score = 115 bits (289), Expect = 6e-26, Method: Composition-based stats.
Identities = 54/79 (68%), Positives = 63/79 (79%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDL 64
VGHCHP VVKAA Q+ LLNTN+RFLHDN+V A++L++ LPD LSVC+F NSGSEANDL
Sbjct: 59 VGHCHPEVVKAAQKQMELLNTNSRFLHDNIVEYAKRLSATLPDRLSVCYFTNSGSEANDL 118
Query: 65 ALRLARVHTNNDDVITQDQ 83
ALRLAR + DVIT D
Sbjct: 119 ALRLARQFRGHQDVITLDH 137
>sp|Q8TBG4|AT2L1_HUMAN Ethanolamine-phosphate phospho-lyase OS=Homo sapiens GN=AGXT2L1
PE=1 SV=1
Length = 499
Score = 115 bits (288), Expect = 7e-26, Method: Composition-based stats.
Identities = 53/79 (67%), Positives = 63/79 (79%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDL 64
VGHCHP VVKAA Q+ LLNTN+RFLHDN+V A++L++ LP+ LSVC+F NSGSEANDL
Sbjct: 59 VGHCHPGVVKAALKQMELLNTNSRFLHDNIVEYAKRLSATLPEKLSVCYFTNSGSEANDL 118
Query: 65 ALRLARVHTNNDDVITQDQ 83
ALRLAR + DVIT D
Sbjct: 119 ALRLARQFRGHQDVITLDH 137
>sp|Q8BWU8|AT2L1_MOUSE Ethanolamine-phosphate phospho-lyase OS=Mus musculus GN=Agxt2l1
PE=2 SV=1
Length = 499
Score = 113 bits (283), Expect = 3e-25, Method: Composition-based stats.
Identities = 52/79 (65%), Positives = 61/79 (77%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDL 64
VGHCHP VVKAA Q+ LLNTN+RFLHDN++ A++L + LP LSVC+F NSGSEANDL
Sbjct: 59 VGHCHPEVVKAAAKQMELLNTNSRFLHDNIIEFAKRLTATLPQELSVCYFTNSGSEANDL 118
Query: 65 ALRLARVHTNNDDVITQDQ 83
ALRLAR + DVIT D
Sbjct: 119 ALRLARQFRGHQDVITLDH 137
>sp|Q6DEB1|AT2L1_XENLA Ethanolamine-phosphate phospho-lyase OS=Xenopus laevis GN=agxt2l1
PE=2 SV=1
Length = 509
Score = 112 bits (281), Expect = 5e-25, Method: Composition-based stats.
Identities = 55/79 (69%), Positives = 61/79 (77%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDL 64
VGH HP V KAA Q+ LLNTN+RFLHDNLV A L S LP+ LSVC+FVNSGSEANDL
Sbjct: 59 VGHSHPEVTKAALKQMELLNTNSRFLHDNLVRYAECLISTLPEKLSVCYFVNSGSEANDL 118
Query: 65 ALRLARVHTNNDDVITQDQ 83
ALRLAR +T + DVIT D
Sbjct: 119 ALRLARQYTGHQDVITLDH 137
>sp|Q7SY54|AT2L1_DANRE Ethanolamine-phosphate phospho-lyase OS=Danio rerio GN=agxt2l1 PE=2
SV=1
Length = 492
Score = 112 bits (279), Expect = 8e-25, Method: Composition-based stats.
Identities = 52/78 (66%), Positives = 63/78 (80%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDL 64
VGHCHP VV A Q+ LLNTN+RFLHD+LVL A++L + LP+ LSVC+FVNSGSEANDL
Sbjct: 60 VGHCHPDVVSAGAKQMELLNTNSRFLHDSLVLYAQRLQATLPEKLSVCYFVNSGSEANDL 119
Query: 65 ALRLARVHTNNDDVITQD 82
ALRLA +T + D+IT D
Sbjct: 120 ALRLAWQYTGHKDIITLD 137
>sp|Q8R1K4|AT2L2_MOUSE 5-phosphohydroxy-L-lysine phospho-lyase OS=Mus musculus GN=Agxt2l2
PE=2 SV=1
Length = 467
Score = 102 bits (253), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/79 (60%), Positives = 62/79 (78%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDL 64
VGHCHP VV+AA Q +LNTN+R+LHDN+V A++L+ LP+ LSV +F+NSGSEANDL
Sbjct: 60 VGHCHPTVVQAAHEQNLVLNTNSRYLHDNIVDYAQRLSETLPEQLSVFYFLNSGSEANDL 119
Query: 65 ALRLARVHTNNDDVITQDQ 83
ALRLAR +T + DV+ D
Sbjct: 120 ALRLARQYTGHQDVVVLDH 138
>sp|Q8IUZ5|AT2L2_HUMAN 5-phosphohydroxy-L-lysine phospho-lyase OS=Homo sapiens GN=AGXT2L2
PE=1 SV=1
Length = 450
Score = 99.8 bits (247), Expect = 4e-21, Method: Composition-based stats.
Identities = 47/79 (59%), Positives = 61/79 (77%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDL 64
VGHCHP VV+AA Q +LNTN+R+LHDN+V A++L+ LP+ L V +F+NSGSEANDL
Sbjct: 60 VGHCHPLVVQAAHEQNQVLNTNSRYLHDNIVDYAQRLSETLPEQLCVFYFLNSGSEANDL 119
Query: 65 ALRLARVHTNNDDVITQDQ 83
ALRLAR +T + DV+ D
Sbjct: 120 ALRLARHYTGHQDVVVLDH 138
>sp|Q17QF0|AGT2_BOVIN Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Bos taurus
GN=AGXT2 PE=2 SV=1
Length = 514
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/81 (51%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Query: 1 MSLPVGHCHPAVVKAACTQLA-LLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGS 59
+++ VGHCHP V AA QL L +T++ F H + A KL++LLP+PL V F VNSGS
Sbjct: 112 VTVSVGHCHPKVNAAAQRQLGRLWHTSSVFFHPLIHEYAEKLSALLPEPLKVVFLVNSGS 171
Query: 60 EANDLALRLARVHTNNDDVIT 80
EANDLA+ +AR H+N+ D+I+
Sbjct: 172 EANDLAMLMARAHSNSTDIIS 192
>sp|Q5RFA3|AGT2_PONAB Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Pongo
abelii GN=AGXT2 PE=2 SV=1
Length = 514
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 1 MSLPVGHCHPAVVKAACTQLA-LLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGS 59
+++ VGHCHP V A QL L +T+ F H + A KLA+LLP+PL V F VNSGS
Sbjct: 112 VTVSVGHCHPKVNAVAQKQLGRLWHTSTVFFHPPMHEYAEKLAALLPEPLKVIFLVNSGS 171
Query: 60 EANDLALRLARVHTNNDDVIT 80
EAN+LA+ +AR H+NN D+I+
Sbjct: 172 EANELAMLMARAHSNNIDIIS 192
>sp|Q9BYV1|AGT2_HUMAN Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Homo
sapiens GN=AGXT2 PE=1 SV=1
Length = 514
Score = 84.7 bits (208), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/81 (51%), Positives = 56/81 (69%), Gaps = 1/81 (1%)
Query: 1 MSLPVGHCHPAVVKAACTQLA-LLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGS 59
+++ VGHCHP V A QL L +T+ F H + A KLA+LLP+PL V F VNSGS
Sbjct: 112 VTVSVGHCHPKVNAVAQKQLGRLWHTSTVFFHPPMHEYAEKLAALLPEPLKVIFLVNSGS 171
Query: 60 EANDLALRLARVHTNNDDVIT 80
EAN+LA+ +AR H+NN D+I+
Sbjct: 172 EANELAMLMARAHSNNIDIIS 192
>sp|Q3UEG6|AGT2_MOUSE Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Mus
musculus GN=Agxt2 PE=2 SV=1
Length = 513
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/81 (49%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 1 MSLPVGHCHPAVVKAACTQL-ALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGS 59
+++ VGHCHP V A Q+ L +T++ F H + A KL++LLP+PL V F VNSGS
Sbjct: 111 VTVSVGHCHPKVSAVAKKQIDRLWHTSSVFFHSPMHEYAEKLSALLPEPLKVIFLVNSGS 170
Query: 60 EANDLALRLARVHTNNDDVIT 80
EANDLA+ +AR H+N+ D+I+
Sbjct: 171 EANDLAMVMARAHSNHTDIIS 191
>sp|Q64565|AGT2_RAT Alanine--glyoxylate aminotransferase 2, mitochondrial OS=Rattus
norvegicus GN=Agxt2 PE=1 SV=2
Length = 512
Score = 80.9 bits (198), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 57/81 (70%), Gaps = 1/81 (1%)
Query: 1 MSLPVGHCHPAVVKAACTQL-ALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGS 59
+++ VGHCHP V A Q+ L +T++ F H + A +L++LLP+PL V F VNSGS
Sbjct: 110 VTVGVGHCHPKVTAVAKKQMDRLWHTSSVFFHSPMHEYAERLSALLPEPLKVIFLVNSGS 169
Query: 60 EANDLALRLARVHTNNDDVIT 80
EANDLA+ +AR ++N+ D+I+
Sbjct: 170 EANDLAMVMARAYSNHTDIIS 190
>sp|P91408|AGT2L_CAEEL Alanine--glyoxylate aminotransferase 2-like OS=Caenorhabditis
elegans GN=T01B11.2 PE=2 SV=1
Length = 467
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDL 64
VGHCHP VV+A QLA N RF+ L CA ++ S LP L F NSGSEANDL
Sbjct: 79 VGHCHPKVVEAISKQLATSTCNVRFVSTQLTDCAEQILSTLPG-LDTVLFCNSGSEANDL 137
Query: 65 ALRLARVHTNNDDVI 79
ALRLAR +T + D I
Sbjct: 138 ALRLARDYTKHKDAI 152
>sp|Q9SR86|AGT23_ARATH Alanine--glyoxylate aminotransferase 2 homolog 3, mitochondrial
OS=Arabidopsis thaliana GN=At3g08860 PE=2 SV=1
Length = 481
Score = 69.3 bits (168), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 2 SLPVGHCHPAVVKAACTQLALLNTNN-RFLHDNLVLCARKLASLLPDPLSVCFFVNSGSE 60
++ GHCHP VV + QL L+N + +L+ + A L S LP L V FF NSG+E
Sbjct: 111 TVSCGHCHPEVVNSVVKQLKLINHSTILYLNHTISDFAEALVSTLPGDLKVVFFTNSGTE 170
Query: 61 ANDLALRLARVHTNNDDVIT 80
AN+LA+ +AR++T +D+++
Sbjct: 171 ANELAMMMARLYTGCNDIVS 190
>sp|Q940M2|AGT21_ARATH Alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial
OS=Arabidopsis thaliana GN=AGT2 PE=1 SV=1
Length = 476
Score = 63.9 bits (154), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 1 MSLPVGHCHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGS 59
+++ GHCHP ++ A Q LL + +LH + A LA+ +P L V +FVNSGS
Sbjct: 105 VTVSCGHCHPDILNAITEQSKLLQHATTIYLHHAIGDFAEALAAKMPGNLKVVYFVNSGS 164
Query: 60 EANDLALRLARVHTNNDDVIT 80
EAN+LA+ +AR++T + ++I+
Sbjct: 165 EANELAMMMARLYTGSLEMIS 185
>sp|Q94AL9|AGT22_ARATH Alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial
OS=Arabidopsis thaliana GN=AGT3 PE=2 SV=2
Length = 477
Score = 60.8 bits (146), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 6 GHCHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDL 64
GHCHP VV+ Q+ L + +L+ + + LAS LP L V FF NSG+EAN+L
Sbjct: 112 GHCHPDVVEPVINQIKRLQHPTVLYLNHAIADFSEALASKLPGDLKVVFFTNSGTEANEL 171
Query: 65 ALRLARVHTNNDDVI 79
AL +A+++T D++
Sbjct: 172 ALMMAKLYTGCQDIV 186
>sp|Q82UP3|ARGD_NITEU Acetylornithine aminotransferase OS=Nitrosomonas europaea (strain
ATCC 19718 / NBRC 14298) GN=argD PE=3 SV=1
Length = 393
Score = 60.1 bits (144), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 5 VGHCHPAVVKAACTQLA-LLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGHCHP +VKA C Q++ L++T+N + + A +L SL L FF NSG+EAN+
Sbjct: 43 VGHCHPVLVKALCEQVSTLIHTSNVYHIQHQERLADRLTSL--SGLEKAFFCNSGAEANE 100
Query: 64 LALRLARVHTNNDDV 78
A++LAR++ +N +
Sbjct: 101 AAIKLARLYGHNQGI 115
>sp|Q81M98|ARGD_BACAN Acetylornithine aminotransferase OS=Bacillus anthracis GN=argD PE=3
SV=1
Length = 386
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 7/82 (8%)
Query: 5 VGHCHPAVVKAACTQLA-LLNTNNRFLHDNLVLCARKLASLLPD--PLSVCFFVNSGSEA 61
+GHCHP V+KA QL + + +N F + ++ASLL + L FF NSG+EA
Sbjct: 44 LGHCHPTVMKAVQEQLNDIWHISNLFTNS----LQEEVASLLTENIALDYVFFCNSGAEA 99
Query: 62 NDLALRLARVHTNNDDVITQDQ 83
N+ AL+LAR HT V+T +Q
Sbjct: 100 NEAALKLARKHTGKSLVVTCEQ 121
>sp|Q818W2|ARGD_BACCR Acetylornithine aminotransferase OS=Bacillus cereus (strain ATCC
14579 / DSM 31) GN=argD PE=3 SV=2
Length = 386
Score = 55.8 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 7/82 (8%)
Query: 5 VGHCHPAVVKAACTQLA-LLNTNNRFLHDNLVLCARKLASLLPD--PLSVCFFVNSGSEA 61
+GHCHP V+K QL + + +N F + ++ASLL + L FF NSG+EA
Sbjct: 44 LGHCHPTVLKGVQEQLDDIWHISNLFTNS----LQEEVASLLTENRALDYVFFCNSGAEA 99
Query: 62 NDLALRLARVHTNNDDVITQDQ 83
N+ AL+LAR HT V+T Q
Sbjct: 100 NEAALKLARKHTGKSLVVTCQQ 121
>sp|Q9US34|YFZ7_SCHPO Uncharacterized aminotransferase C1039.07c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC1039.07c PE=3
SV=1
Length = 448
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 1 MSLPVGHCHPAVVKAACTQL---ALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNS 57
MS +GH HP + AC + L++ + FL +V A +L+ LLPD L F+++
Sbjct: 60 MSAILGHSHPDIT--ACIEKNLPKLVHLFSGFLSPPVVQLATELSDLLPDGLDKTLFLST 117
Query: 58 GSEANDLALRLARVHTNNDDVI 79
G EAN+ ALR+A+V+TN + +
Sbjct: 118 GGEANEAALRMAKVYTNKYECV 139
>sp|Q9ZJ10|ARGD_BACAM Acetylornithine aminotransferase (Fragment) OS=Bacillus
amyloliquefaciens GN=argD PE=3 SV=1
Length = 229
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 5 VGHCHPAVVKAACTQL-ALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEAND 63
+GHCH AV +A QL ++ + +N F + A+KLA+ L FF NSG+EAN+
Sbjct: 43 LGHCHEAVTEAVKKQLDSVWHVSNLFQNSLQEQAAQKLAAHSAGDL--VFFCNSGAEANE 100
Query: 64 LALRLARVHTNNDDVIT 80
A++LAR T +IT
Sbjct: 101 GAIKLARKATGKTKIIT 117
>sp|Q9CC12|ARGD_MYCLE Acetylornithine aminotransferase OS=Mycobacterium leprae (strain
TN) GN=argD PE=3 SV=1
Length = 404
Score = 50.8 bits (120), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Query: 5 VGHCHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLL-PDPLSVCFFVNSGSEAN 62
+GH HPAV++A Q+ L +T+N + + + A +L +LL D + FF NSG+EAN
Sbjct: 58 LGHRHPAVIEAVTHQITTLGHTSNLYATEPSITLAEELVALLGADTQTRVFFCNSGTEAN 117
Query: 63 DLALRLARV 71
+LA +L+R+
Sbjct: 118 ELAFKLSRL 126
>sp|Q828A3|ARGD_STRAW Acetylornithine aminotransferase OS=Streptomyces avermitilis
(strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804
/ NRRL 8165 / MA-4680) GN=argD PE=3 SV=1
Length = 403
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 5 VGHCHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEAND 63
+GH HPA+V+A TQ+A L + +N F+ + V A +L L V +F NSG+EAN+
Sbjct: 57 LGHAHPAIVEAVSTQIASLGHVSNLFVAEPPVALAERLLQLFGRDGRV-YFCNSGAEANE 115
Query: 64 LALRLARVHTNNDDVITQ 81
A ++ R+ + V TQ
Sbjct: 116 AAFKIGRLTGRSHMVATQ 133
>sp|Q8PX16|ARGD_METMA Acetylornithine aminotransferase OS=Methanosarcina mazei (strain
ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM
88) GN=argD PE=3 SV=1
Length = 395
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 5 VGHCHPAVVKAACTQL-ALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGHCHP VVKA Q L++ +N + + A LAS+ + FF NSG+EA +
Sbjct: 65 VGHCHPTVVKAIQAQAEKLIHVSNLYYTEIQAEFAETLASI--TGMECVFFCNSGAEAVE 122
Query: 64 LALRLARVHTNNDDVITQDQ 83
A++LARV T + +
Sbjct: 123 AAMKLARVATGKSAFVAAEH 142
>sp|Q9K8V5|ARGD_BACHD Acetylornithine aminotransferase OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=argD PE=3 SV=1
Length = 384
Score = 50.1 bits (118), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDP--LSVCFFVNSGSEAN 62
+GHCHP VV A QL + H + +A+LL + + FF NSG+EAN
Sbjct: 43 LGHCHPKVVAAVEEQLHSFWHVSNLFH---IPIQENVAALLTEQSGMDAVFFCNSGAEAN 99
Query: 63 DLALRLARVHTNNDDVITQDQ 83
+ A++LAR T +++T Q
Sbjct: 100 EAAIKLARKATGKHEIVTFTQ 120
>sp|O27392|ARGD_METTH Acetylornithine aminotransferase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=argD PE=3 SV=1
Length = 390
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 5 VGHCHPAVVKAACTQLA-LLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEAND 63
+GH HP V A C Q L++++N + V A+ L ++ P FF NSG+EAN+
Sbjct: 53 IGHAHPKVALAICHQAQRLIHSSNIYYTREQVELAKLLTAI--SPHDRVFFANSGAEANE 110
Query: 64 LALRLARVHTNNDDVITQD 82
A++LAR T ++I +
Sbjct: 111 GAIKLARKFTGKSEIIAAE 129
>sp|P59324|ARGD_YERPE Acetylornithine/succinyldiaminopimelate aminotransferase
OS=Yersinia pestis GN=argD PE=3 SV=2
Length = 405
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 43/68 (63%), Gaps = 5/68 (7%)
Query: 5 VGHCHPAVVKAACTQ-LALLNTNNRFLHDNLVLCARKL-ASLLPDPLSVCFFVNSGSEAN 62
+GHCHPA+V A Q L +T+N F ++ + A+KL A+ D + FF NSG+EAN
Sbjct: 55 LGHCHPALVSALHQQGETLWHTSNVFTNEPALRLAQKLIAATFADRV---FFANSGAEAN 111
Query: 63 DLALRLAR 70
+ A +LAR
Sbjct: 112 EAAFKLAR 119
>sp|B1LF65|PAT_ECOSM Putrescine aminotransferase OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=patA PE=3 SV=2
Length = 459
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|B7LQF8|PAT_ESCF3 Putrescine aminotransferase OS=Escherichia fergusonii (strain ATCC
35469 / DSM 13698 / CDC 0568-73) GN=patA PE=3 SV=2
Length = 459
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|B7ND61|PAT_ECOLU Putrescine aminotransferase OS=Escherichia coli O17:K52:H18 (strain
UMN026 / ExPEC) GN=patA PE=3 SV=2
Length = 459
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|Q0TD34|PAT_ECOL5 Putrescine aminotransferase OS=Escherichia coli O6:K15:H31 (strain
536 / UPEC) GN=patA PE=3 SV=2
Length = 459
Score = 49.7 bits (117), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|B1IRP4|PAT_ECOLC Putrescine aminotransferase OS=Escherichia coli (strain ATCC 8739 /
DSM 1576 / Crooks) GN=patA PE=3 SV=2
Length = 459
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|Q83JJ8|PAT_SHIFL Putrescine aminotransferase OS=Shigella flexneri GN=patA PE=3 SV=5
Length = 459
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|Q0T0J2|PAT_SHIF8 Putrescine aminotransferase OS=Shigella flexneri serotype 5b
(strain 8401) GN=patA PE=3 SV=1
Length = 459
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|Q8Z3L9|PAT_SALTI Putrescine aminotransferase OS=Salmonella typhi GN=patA PE=3 SV=2
Length = 459
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|B4TIU6|PAT_SALHS Putrescine aminotransferase OS=Salmonella heidelberg (strain SL476)
GN=patA PE=3 SV=1
Length = 459
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|Q1R6Q7|PAT_ECOUT Putrescine aminotransferase OS=Escherichia coli (strain UTI89 /
UPEC) GN=patA PE=3 SV=2
Length = 459
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|B6I445|PAT_ECOSE Putrescine aminotransferase OS=Escherichia coli (strain SE11)
GN=patA PE=3 SV=2
Length = 459
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|A1AFZ3|PAT_ECOK1 Putrescine aminotransferase OS=Escherichia coli O1:K1 / APEC
GN=patA PE=3 SV=2
Length = 459
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|B7N0M2|PAT_ECO81 Putrescine aminotransferase OS=Escherichia coli O81 (strain ED1a)
GN=patA PE=3 SV=2
Length = 459
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|B5YRB3|PAT_ECO5E Putrescine aminotransferase OS=Escherichia coli O157:H7 (strain
EC4115 / EHEC) GN=patA PE=3 SV=1
Length = 459
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|Q8XAN1|PAT_ECO57 Putrescine aminotransferase OS=Escherichia coli O157:H7 GN=patA
PE=3 SV=2
Length = 459
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|B7LH08|PAT_ECO55 Putrescine aminotransferase OS=Escherichia coli (strain 55989 /
EAEC) GN=patA PE=3 SV=2
Length = 459
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|B7MB08|PAT_ECO45 Putrescine aminotransferase OS=Escherichia coli O45:K1 (strain S88
/ ExPEC) GN=patA PE=3 SV=2
Length = 459
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|B7UIY0|PAT_ECO27 Putrescine aminotransferase OS=Escherichia coli O127:H6 (strain
E2348/69 / EPEC) GN=patA PE=3 SV=1
Length = 459
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|A7ZRV6|PAT_ECO24 Putrescine aminotransferase OS=Escherichia coli O139:H28 (strain
E24377A / ETEC) GN=patA PE=3 SV=2
Length = 459
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|Q8ZLX7|PAT_SALTY Putrescine aminotransferase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=patA PE=3 SV=2
Length = 459
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|B4TVV2|PAT_SALSV Putrescine aminotransferase OS=Salmonella schwarzengrund (strain
CVM19633) GN=patA PE=3 SV=1
Length = 459
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
>sp|C0PYZ1|PAT_SALPC Putrescine aminotransferase OS=Salmonella paratyphi C (strain
RKS4594) GN=patA PE=3 SV=2
Length = 459
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNL-VLCARKLASLLPDPLSVCFFVNSGSEAND 63
VGH +P VV A QLA +++ L D L + A+ LA+L P L FF NSG+E+ +
Sbjct: 96 VGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVE 155
Query: 64 LALRLARVH 72
AL+LA+ +
Sbjct: 156 AALKLAKAY 164
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.134 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,489,964
Number of Sequences: 539616
Number of extensions: 890359
Number of successful extensions: 3786
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 438
Number of HSP's that attempted gapping in prelim test: 2998
Number of HSP's gapped (non-prelim): 857
length of query: 83
length of database: 191,569,459
effective HSP length: 54
effective length of query: 29
effective length of database: 162,430,195
effective search space: 4710475655
effective search space used: 4710475655
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)