Query psy6206
Match_columns 83
No_of_seqs 131 out of 1118
Neff 8.7
Searched_HMMs 29240
Date Fri Aug 16 20:26:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6206.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6206hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e3q_A Pyruvate transaminase; 99.9 5E-25 1.7E-29 152.2 10.6 83 1-83 77-168 (473)
2 4atq_A 4-aminobutyrate transam 99.9 6.4E-25 2.2E-29 151.1 9.9 83 1-83 74-159 (456)
3 4ao9_A Beta-phenylalanine amin 99.9 2.4E-23 8.2E-28 143.3 9.1 81 1-83 97-177 (454)
4 4a0g_A Adenosylmethionine-8-am 99.9 1.5E-22 5E-27 147.1 7.5 83 1-83 390-491 (831)
5 3i5t_A Aminotransferase; pyrid 99.8 3.8E-19 1.3E-23 122.1 10.5 83 1-83 64-154 (476)
6 3hmu_A Aminotransferase, class 99.8 5.1E-19 1.7E-23 121.5 9.0 83 1-83 65-156 (472)
7 3tfu_A Adenosylmethionine-8-am 99.8 8.3E-19 2.9E-23 119.9 8.9 83 1-83 85-175 (457)
8 3oks_A 4-aminobutyrate transam 99.8 1.4E-18 4.8E-23 118.3 9.5 83 1-83 71-156 (451)
9 4ffc_A 4-aminobutyrate aminotr 99.8 1.9E-18 6.4E-23 117.8 9.9 83 1-83 74-159 (453)
10 2yky_A Beta-transaminase; tran 99.6 5.8E-20 2E-24 126.7 0.0 81 1-83 110-190 (465)
11 4e77_A Glutamate-1-semialdehyd 99.7 1.1E-17 3.7E-22 112.7 10.4 81 1-83 63-143 (429)
12 3k28_A Glutamate-1-semialdehyd 99.7 2.5E-17 8.7E-22 111.0 10.7 81 1-83 63-143 (429)
13 3l44_A Glutamate-1-semialdehyd 99.7 3.3E-17 1.1E-21 110.3 10.9 81 1-83 65-145 (434)
14 3gju_A Putative aminotransfera 99.7 2.4E-17 8.2E-22 112.3 9.6 83 1-83 61-152 (460)
15 3dod_A Adenosylmethionine-8-am 99.7 1.8E-17 6.3E-22 112.4 8.7 83 1-83 54-144 (448)
16 4a6r_A Omega transaminase; tra 99.7 4.7E-17 1.6E-21 110.8 10.7 83 1-83 60-151 (459)
17 3fq8_A Glutamate-1-semialdehyd 99.7 8.7E-17 3E-21 108.1 10.3 81 1-83 62-142 (427)
18 3n5m_A Adenosylmethionine-8-am 99.7 6.3E-17 2.2E-21 109.7 8.0 82 1-83 59-147 (452)
19 1ohv_A 4-aminobutyrate aminotr 99.7 6.1E-17 2.1E-21 111.1 7.9 72 1-72 73-150 (472)
20 2cjg_A L-lysine-epsilon aminot 99.7 1.7E-16 6E-21 107.9 8.2 83 1-83 64-165 (449)
21 2e7u_A Glutamate-1-semialdehyd 99.6 2.2E-15 7.6E-20 101.3 10.9 81 1-83 62-142 (424)
22 2epj_A Glutamate-1-semialdehyd 99.6 2.2E-15 7.5E-20 101.5 10.2 80 1-82 66-145 (434)
23 3i4j_A Aminotransferase, class 99.6 3.4E-15 1.2E-19 100.4 10.2 81 2-82 40-128 (430)
24 1zod_A DGD, 2,2-dialkylglycine 99.6 4.6E-15 1.6E-19 99.7 10.4 81 2-82 54-135 (433)
25 3dxv_A Alpha-amino-epsilon-cap 99.6 4.5E-15 1.5E-19 100.0 9.9 81 2-82 54-137 (439)
26 1z7d_A Ornithine aminotransfer 99.6 6E-15 2.1E-19 100.0 8.9 79 2-82 76-163 (433)
27 3nx3_A Acoat, acetylornithine 99.6 1.4E-14 4.7E-19 96.3 9.2 79 2-82 47-131 (395)
28 2cy8_A D-phgat, D-phenylglycin 99.6 2.6E-14 8.9E-19 96.8 10.6 80 1-82 67-146 (453)
29 2oat_A Ornithine aminotransfer 99.6 8.8E-15 3E-19 99.4 8.0 79 2-82 87-174 (439)
30 2pb2_A Acetylornithine/succiny 99.5 4.2E-14 1.4E-18 95.3 9.8 80 1-82 67-153 (420)
31 3a8u_X Omega-amino acid--pyruv 99.5 3.7E-14 1.3E-18 95.9 8.3 82 1-82 60-149 (449)
32 1s0a_A Adenosylmethionine-8-am 99.5 2.2E-13 7.6E-18 91.5 9.8 82 1-82 53-141 (429)
33 3ruy_A Ornithine aminotransfer 99.4 5.4E-13 1.9E-17 88.4 8.2 79 2-82 47-134 (392)
34 2eo5_A 419AA long hypothetical 99.4 1.3E-12 4.4E-17 87.9 9.9 81 1-82 52-136 (419)
35 4adb_A Succinylornithine trans 99.4 3.3E-12 1.1E-16 84.8 9.8 79 2-82 50-135 (406)
36 1sff_A 4-aminobutyrate aminotr 99.3 2.7E-11 9.1E-16 80.9 8.2 81 2-82 52-135 (426)
37 2ord_A Acoat, acetylornithine 99.3 6.5E-11 2.2E-15 78.6 9.9 79 2-82 51-135 (397)
38 1vef_A Acetylornithine/acetyl- 99.2 1.8E-10 6.1E-15 76.4 9.3 81 2-82 56-137 (395)
39 2eh6_A Acoat, acetylornithine 99.1 1.9E-09 6.4E-14 70.8 10.2 79 3-82 40-124 (375)
40 3l8a_A METC, putative aminotra 98.6 4.7E-07 1.6E-11 60.6 8.6 75 5-81 72-149 (421)
41 1svv_A Threonine aldolase; str 98.5 7.7E-07 2.6E-11 57.6 8.5 76 3-81 21-96 (359)
42 1elu_A L-cysteine/L-cystine C- 98.3 1.4E-06 4.9E-11 57.0 6.6 79 3-82 23-108 (390)
43 1kmj_A Selenocysteine lyase; p 98.3 6.9E-06 2.4E-10 53.9 9.5 79 4-82 31-120 (406)
44 3nyt_A Aminotransferase WBPE; 98.3 1.5E-06 5E-11 57.2 5.7 75 3-80 5-80 (367)
45 3f9t_A TDC, L-tyrosine decarbo 98.3 5.7E-06 2E-10 54.0 8.4 65 8-72 42-109 (397)
46 2w8t_A SPT, serine palmitoyltr 98.3 1.1E-05 3.9E-10 54.1 9.6 64 4-69 74-144 (427)
47 4dq6_A Putative pyridoxal phos 98.2 1.1E-05 3.9E-10 52.8 8.6 73 7-81 45-120 (391)
48 1lc5_A COBD, L-threonine-O-3-p 98.2 4.8E-06 1.7E-10 54.5 6.6 70 4-81 35-104 (364)
49 1v72_A Aldolase; PLP-dependent 98.2 4.3E-06 1.5E-10 54.1 6.1 65 3-70 15-80 (356)
50 3frk_A QDTB; aminotransferase, 98.1 4.3E-06 1.5E-10 54.9 5.7 75 3-80 6-81 (373)
51 3lvm_A Cysteine desulfurase; s 98.1 1.8E-06 6.1E-11 57.4 3.8 78 4-81 30-119 (423)
52 1eg5_A Aminotransferase; PLP-d 98.1 8.2E-06 2.8E-10 53.2 6.7 78 4-81 9-95 (384)
53 3kax_A Aminotransferase, class 98.1 3E-05 1E-09 50.7 9.3 73 7-81 37-112 (383)
54 1qz9_A Kynureninase; kynurenin 98.1 3.1E-05 1.1E-09 51.3 9.1 69 4-72 36-111 (416)
55 1t3i_A Probable cysteine desul 98.1 1.2E-05 4E-10 53.1 6.8 77 5-81 37-124 (420)
56 1v2d_A Glutamine aminotransfer 98.0 1.6E-05 5.4E-10 52.3 6.9 69 8-81 39-108 (381)
57 3dzz_A Putative pyridoxal 5'-p 98.0 4.6E-05 1.6E-09 49.9 8.9 74 6-81 39-115 (391)
58 3uwc_A Nucleotide-sugar aminot 98.0 5.7E-06 1.9E-10 54.1 4.2 75 3-81 9-84 (374)
59 3cq5_A Histidinol-phosphate am 98.0 3.9E-05 1.3E-09 50.3 8.2 74 5-81 42-122 (369)
60 3ezs_A Aminotransferase ASPB; 98.0 3.3E-05 1.1E-09 50.5 7.5 74 8-81 37-114 (376)
61 3ftb_A Histidinol-phosphate am 98.0 1.4E-05 4.9E-10 51.9 5.5 59 8-69 40-98 (361)
62 4eb5_A Probable cysteine desul 98.0 2.7E-05 9.3E-10 50.8 6.8 67 4-70 8-81 (382)
63 1fc4_A 2-amino-3-ketobutyrate 97.9 0.00012 4.1E-09 48.3 9.3 65 3-69 54-125 (401)
64 1bs0_A Protein (8-amino-7-oxon 97.9 0.00016 5.5E-09 47.4 9.8 63 5-69 50-119 (384)
65 3tqx_A 2-amino-3-ketobutyrate 97.9 0.00013 4.3E-09 47.9 9.2 65 3-69 52-123 (399)
66 1ax4_A Tryptophanase; tryptoph 97.9 2.3E-05 7.8E-10 52.8 5.6 63 10-76 55-121 (467)
67 3kki_A CAI-1 autoinducer synth 97.9 6E-05 2E-09 50.0 7.5 63 5-69 70-139 (409)
68 3ly1_A Putative histidinol-pho 97.9 8.1E-05 2.8E-09 48.2 7.9 59 8-69 30-88 (354)
69 2q7w_A Aspartate aminotransfer 97.9 6.3E-05 2.1E-09 49.5 7.5 75 7-82 44-127 (396)
70 1ajs_A Aspartate aminotransfer 97.9 2.1E-05 7.2E-10 52.1 5.2 73 10-82 51-137 (412)
71 2e7j_A SEP-tRNA:Cys-tRNA synth 97.9 4.1E-05 1.4E-09 49.8 6.4 74 4-81 17-99 (371)
72 3dr4_A Putative perosamine syn 97.9 1E-05 3.5E-10 53.4 3.5 74 3-81 25-102 (391)
73 3hdo_A Histidinol-phosphate am 97.9 4.1E-05 1.4E-09 50.0 6.4 72 8-81 40-112 (360)
74 2z61_A Probable aspartate amin 97.9 0.00024 8.1E-09 46.4 9.9 75 4-81 40-119 (370)
75 1vjo_A Alanine--glyoxylate ami 97.8 1.9E-05 6.5E-10 51.9 4.6 73 5-81 42-115 (393)
76 2cb1_A O-acetyl homoserine sul 97.8 9.5E-05 3.3E-09 49.5 7.8 74 3-81 28-101 (412)
77 3a2b_A Serine palmitoyltransfe 97.8 0.00015 5.2E-09 47.8 8.6 63 5-69 54-123 (398)
78 3cai_A Possible aminotransfera 97.8 0.00013 4.5E-09 48.0 8.3 76 6-81 36-119 (406)
79 3ffh_A Histidinol-phosphate am 97.8 3E-05 1E-09 50.5 5.1 69 8-81 46-114 (363)
80 3get_A Histidinol-phosphate am 97.8 9E-05 3.1E-09 48.3 7.3 59 8-69 44-102 (365)
81 1yiz_A Kynurenine aminotransfe 97.8 0.00017 5.9E-09 48.0 8.8 75 4-81 48-131 (429)
82 1d2f_A MALY protein; aminotran 97.8 0.00022 7.5E-09 46.9 9.1 75 4-81 39-117 (390)
83 3vax_A Putative uncharacterize 97.8 3.7E-05 1.3E-09 50.6 5.4 66 5-70 29-101 (400)
84 3jtx_A Aminotransferase; NP_28 97.8 0.00019 6.5E-09 47.1 8.8 74 8-81 44-126 (396)
85 2fnu_A Aminotransferase; prote 97.8 9.4E-05 3.2E-09 48.1 7.2 70 7-81 10-80 (375)
86 3euc_A Histidinol-phosphate am 97.8 0.00012 4E-09 47.8 7.5 61 8-69 44-105 (367)
87 2oqx_A Tryptophanase; lyase, p 97.8 1.2E-05 4.2E-10 54.2 2.8 59 10-72 53-112 (467)
88 2zc0_A Alanine glyoxylate tran 97.8 0.00016 5.4E-09 47.8 8.1 74 5-81 47-128 (407)
89 2ay1_A Aroat, aromatic amino a 97.8 5.1E-05 1.7E-09 49.9 5.5 74 7-81 44-123 (394)
90 2zyj_A Alpha-aminodipate amino 97.8 4.5E-05 1.5E-09 50.4 5.3 75 5-81 45-121 (397)
91 1c7n_A Cystalysin; transferase 97.7 0.00033 1.1E-08 46.1 9.1 72 8-81 45-119 (399)
92 2z9v_A Aspartate aminotransfer 97.7 5E-05 1.7E-09 49.8 4.6 74 4-81 16-89 (392)
93 3fkd_A L-threonine-O-3-phospha 97.7 9.8E-05 3.4E-09 47.9 5.7 60 8-70 29-88 (350)
94 3b8x_A WBDK, pyridoxamine 5-ph 97.7 0.00033 1.1E-08 46.2 8.4 62 4-70 7-70 (390)
95 3fdb_A Beta C-S lyase, putativ 97.7 0.00048 1.7E-08 44.8 9.1 73 7-81 36-111 (377)
96 4hvk_A Probable cysteine desul 97.7 0.00085 2.9E-08 43.4 10.2 66 5-70 9-81 (382)
97 1wyu_B Glycine dehydrogenase s 97.7 0.00022 7.5E-09 48.7 7.5 76 5-81 75-162 (474)
98 3fsl_A Aromatic-amino-acid ami 97.6 0.00011 3.7E-09 48.4 5.8 72 10-81 47-127 (397)
99 3dyd_A Tyrosine aminotransfera 97.6 0.00024 8E-09 47.7 7.4 71 7-80 71-147 (427)
100 2dou_A Probable N-succinyldiam 97.6 0.0006 2.1E-08 44.6 9.0 74 4-81 36-117 (376)
101 1u08_A Hypothetical aminotrans 97.6 0.00085 2.9E-08 44.0 9.6 72 8-81 44-121 (386)
102 3ele_A Amino transferase; RER0 97.6 0.00073 2.5E-08 44.4 9.0 74 7-81 48-130 (398)
103 2o0r_A RV0858C (N-succinyldiam 97.6 0.00057 2E-08 45.3 8.5 72 8-81 39-116 (411)
104 3pj0_A LMO0305 protein; struct 97.6 0.00011 3.7E-09 47.7 4.7 66 9-79 28-93 (359)
105 3a9z_A Selenocysteine lyase; P 97.6 0.00044 1.5E-08 46.0 7.8 65 6-70 28-99 (432)
106 2x5d_A Probable aminotransfera 97.6 0.00024 8.1E-09 47.2 6.5 75 4-81 48-129 (412)
107 3p1t_A Putative histidinol-pho 97.5 0.00034 1.2E-08 44.9 7.0 59 8-69 30-88 (337)
108 4f4e_A Aromatic-amino-acid ami 97.5 0.00028 9.6E-09 47.1 6.6 72 10-81 70-149 (420)
109 3mc6_A Sphingosine-1-phosphate 97.5 0.0012 4E-08 45.0 9.7 66 7-72 75-149 (497)
110 1gd9_A Aspartate aminotransfer 97.5 0.00061 2.1E-08 44.7 8.0 72 8-81 40-117 (389)
111 1iug_A Putative aspartate amin 97.5 0.00012 4.1E-09 47.2 4.4 70 8-81 12-81 (352)
112 3nra_A Aspartate aminotransfer 97.5 0.0003 1E-08 46.3 6.3 71 8-80 54-131 (407)
113 3bb8_A CDP-4-keto-6-deoxy-D-gl 97.5 0.001 3.4E-08 44.7 8.8 63 3-70 34-98 (437)
114 2dr1_A PH1308 protein, 386AA l 97.5 0.0001 3.5E-09 48.1 3.7 73 5-81 28-101 (386)
115 1vp4_A Aminotransferase, putat 97.5 0.00045 1.5E-08 46.1 6.8 75 5-81 56-139 (425)
116 3g7q_A Valine-pyruvate aminotr 97.4 0.00022 7.5E-09 47.1 5.2 69 3-71 34-120 (417)
117 1o4s_A Aspartate aminotransfer 97.4 0.0009 3.1E-08 44.1 8.1 75 4-81 52-131 (389)
118 2bwn_A 5-aminolevulinate synth 97.4 0.0027 9.2E-08 41.8 10.4 73 5-80 57-137 (401)
119 1j32_A Aspartate aminotransfer 97.4 0.0012 4.1E-08 43.2 8.6 72 8-81 44-120 (388)
120 2oga_A Transaminase; PLP-depen 97.4 0.0014 4.7E-08 43.4 8.9 66 10-81 44-109 (399)
121 2o1b_A Aminotransferase, class 97.4 0.00045 1.5E-08 45.9 6.6 75 4-81 58-139 (404)
122 2huf_A Alanine glyoxylate amin 97.4 0.0001 3.6E-09 48.3 3.4 70 8-81 30-100 (393)
123 3acz_A Methionine gamma-lyase; 97.4 0.00031 1E-08 46.7 5.7 76 3-82 30-105 (389)
124 3qhx_A Cystathionine gamma-syn 97.4 0.00077 2.6E-08 44.9 7.5 52 27-82 61-112 (392)
125 3nnk_A Ureidoglycine-glyoxylat 97.4 0.00023 7.8E-09 46.8 4.7 69 9-81 25-94 (411)
126 1mdo_A ARNB aminotransferase; 97.4 0.0013 4.5E-08 43.0 8.4 67 9-81 19-85 (393)
127 1b9h_A AHBA synthase, protein 97.4 0.0013 4.5E-08 43.1 8.0 69 9-81 16-84 (388)
128 3h14_A Aminotransferase, class 97.4 0.0014 4.7E-08 43.1 8.1 70 9-80 46-120 (391)
129 2po3_A 4-dehydrase; external a 97.4 0.0017 5.9E-08 43.3 8.7 63 10-81 32-96 (424)
130 3e2y_A Kynurenine-oxoglutarate 97.3 0.00046 1.6E-08 45.5 5.8 71 9-81 38-115 (410)
131 3isl_A Purine catabolism prote 97.3 0.00025 8.6E-09 46.7 4.4 76 4-81 14-92 (416)
132 1bw0_A TAT, protein (tyrosine 97.3 0.00052 1.8E-08 45.5 5.8 73 7-81 50-134 (416)
133 3kgw_A Alanine-glyoxylate amin 97.3 0.00015 5.3E-09 47.2 3.2 69 9-81 35-104 (393)
134 3mad_A Sphingosine-1-phosphate 97.3 0.00098 3.4E-08 45.7 7.3 67 7-73 107-184 (514)
135 3g0t_A Putative aminotransfera 97.3 0.00074 2.5E-08 44.9 6.4 63 8-70 58-126 (437)
136 2gb3_A Aspartate aminotransfer 97.3 0.0011 3.8E-08 43.9 7.2 71 8-81 57-132 (409)
137 3b46_A Aminotransferase BNA3; 97.3 0.0019 6.4E-08 43.6 8.2 72 8-81 71-148 (447)
138 3zrp_A Serine-pyruvate aminotr 97.3 8.5E-05 2.9E-09 48.3 1.6 68 9-81 14-83 (384)
139 3lws_A Aromatic amino acid bet 97.3 0.00046 1.6E-08 44.8 4.9 73 5-79 15-92 (357)
140 1xi9_A Putative transaminase; 97.2 0.0026 9E-08 42.0 8.2 72 8-81 55-131 (406)
141 3aow_A Putative uncharacterize 97.2 0.0035 1.2E-07 42.5 8.6 73 7-81 91-170 (448)
142 3ecd_A Serine hydroxymethyltra 97.2 0.0013 4.5E-08 43.3 6.4 72 6-81 42-124 (425)
143 2ch1_A 3-hydroxykynurenine tra 97.1 0.00032 1.1E-08 46.0 3.4 69 9-81 30-99 (396)
144 3gbx_A Serine hydroxymethyltra 97.1 0.00076 2.6E-08 44.4 5.2 64 5-69 39-112 (420)
145 2rfv_A Methionine gamma-lyase; 97.1 0.0017 5.8E-08 43.0 6.9 51 27-81 59-109 (398)
146 3fvs_A Kynurenine--oxoglutarat 97.1 0.0021 7.2E-08 42.5 7.3 72 8-81 42-121 (422)
147 2qma_A Diaminobutyrate-pyruvat 97.1 0.003 1E-07 43.2 8.3 63 9-71 113-180 (497)
148 3e9k_A Kynureninase; kynurenin 97.1 0.00024 8.3E-09 48.0 2.7 79 3-81 74-161 (465)
149 3ke3_A Putative serine-pyruvat 97.1 0.00096 3.3E-08 44.0 5.5 47 32-82 35-81 (379)
150 3f0h_A Aminotransferase; RER07 97.1 0.0006 2E-08 44.4 4.4 76 2-81 20-101 (376)
151 1uu1_A Histidinol-phosphate am 97.1 0.00062 2.1E-08 44.0 4.4 61 8-69 33-96 (335)
152 2c81_A Glutamine-2-deoxy-scyll 97.1 0.003 1E-07 42.0 7.6 70 9-81 15-88 (418)
153 2yrr_A Aminotransferase, class 97.0 0.00011 3.8E-09 47.2 0.4 68 8-81 11-80 (353)
154 3b1d_A Betac-S lyase; HET: PLP 96.1 9.8E-05 3.3E-09 48.7 0.0 61 9-69 46-109 (392)
155 3qgu_A LL-diaminopimelate amin 97.0 0.0027 9.1E-08 42.5 6.9 71 8-81 83-161 (449)
156 1yaa_A Aspartate aminotransfer 97.0 0.00084 2.9E-08 44.4 4.2 73 9-81 49-130 (412)
157 3h7f_A Serine hydroxymethyltra 97.0 0.002 7E-08 43.5 6.1 72 6-81 55-137 (447)
158 2dgk_A GAD-beta, GADB, glutama 97.0 0.003 1E-07 42.6 6.8 65 7-71 53-125 (452)
159 1o69_A Aminotransferase; struc 97.0 0.0023 8E-08 42.3 6.2 67 10-81 12-78 (394)
160 1m32_A 2-aminoethylphosphonate 96.9 0.00024 8.3E-09 45.8 1.1 70 8-81 15-86 (366)
161 3t18_A Aminotransferase class 96.8 0.0037 1.3E-07 41.3 6.1 60 10-69 58-121 (413)
162 1gc0_A Methionine gamma-lyase; 96.8 0.0039 1.3E-07 41.4 6.1 52 26-81 59-110 (398)
163 3asa_A LL-diaminopimelate amin 96.8 0.0077 2.6E-07 39.7 7.5 71 8-81 47-124 (400)
164 1cs1_A CGS, protein (cystathio 96.7 0.0072 2.5E-07 39.7 6.9 51 27-81 47-97 (386)
165 3if2_A Aminotransferase; YP_26 96.7 0.0035 1.2E-07 41.8 5.5 36 35-70 90-127 (444)
166 3n0l_A Serine hydroxymethyltra 96.6 0.0021 7.2E-08 42.3 3.9 63 6-69 35-107 (417)
167 3ndn_A O-succinylhomoserine su 96.6 0.0069 2.4E-07 40.8 6.3 52 26-81 75-126 (414)
168 2ctz_A O-acetyl-L-homoserine s 96.6 0.016 5.5E-07 38.9 8.0 53 26-82 52-104 (421)
169 3ju7_A Putative PLP-dependent 96.5 0.016 5.5E-07 38.4 7.5 67 10-80 16-83 (377)
170 3meb_A Aspartate aminotransfer 96.5 0.0035 1.2E-07 42.3 4.3 33 49-81 117-151 (448)
171 2dkj_A Serine hydroxymethyltra 96.4 0.0079 2.7E-07 39.4 5.8 70 9-81 36-115 (407)
172 3ei9_A LL-diaminopimelate amin 96.4 0.031 1.1E-06 37.1 8.6 71 8-81 70-148 (432)
173 3nmy_A Xometc, cystathionine g 96.3 0.0058 2E-07 41.0 4.8 50 27-81 62-111 (400)
174 1fg7_A Histidinol phosphate am 96.3 0.0031 1.1E-07 41.2 3.1 47 34-81 60-106 (356)
175 3e77_A Phosphoserine aminotran 96.3 0.0038 1.3E-07 42.0 3.6 60 8-67 24-95 (377)
176 3m5u_A Phosphoserine aminotran 96.2 0.0037 1.3E-07 41.8 3.4 60 9-68 17-88 (361)
177 3ri6_A O-acetylhomoserine sulf 96.2 0.015 5.3E-07 39.5 6.5 52 26-81 76-127 (430)
178 2vi8_A Serine hydroxymethyltra 96.2 0.016 5.6E-07 37.9 6.3 73 6-81 33-115 (405)
179 2bkw_A Alanine-glyoxylate amin 96.2 0.0054 1.8E-07 39.8 3.9 48 34-81 40-92 (385)
180 2jis_A Cysteine sulfinic acid 96.1 0.015 5.1E-07 40.0 6.1 39 34-72 150-188 (515)
181 3ffr_A Phosphoserine aminotran 96.1 0.019 6.4E-07 36.8 6.3 61 9-69 16-81 (362)
182 1n8p_A Cystathionine gamma-lya 96.1 0.028 9.7E-07 37.4 7.1 50 27-81 50-99 (393)
183 3piu_A 1-aminocyclopropane-1-c 96.1 0.019 6.4E-07 38.3 6.2 23 48-70 110-132 (435)
184 1b5p_A Protein (aspartate amin 96.0 0.052 1.8E-06 35.6 8.2 61 9-69 46-111 (385)
185 3ez1_A Aminotransferase MOCR f 96.0 0.001 3.6E-08 44.1 -0.0 38 34-71 72-111 (423)
186 3qm2_A Phosphoserine aminotran 96.0 0.0032 1.1E-07 42.4 2.2 60 9-68 39-110 (386)
187 2okj_A Glutamate decarboxylase 95.9 0.019 6.6E-07 39.3 5.8 38 35-72 135-174 (504)
188 2ez2_A Beta-tyrosinase, tyrosi 95.9 0.05 1.7E-06 36.4 7.6 37 31-69 74-110 (456)
189 3op7_A Aminotransferase class 95.9 0.024 8.2E-07 36.8 5.9 46 34-81 65-111 (375)
190 2x5f_A Aspartate_tyrosine_phen 95.8 0.00085 2.9E-08 44.7 -1.2 73 5-81 60-143 (430)
191 1iay_A ACC synthase 2, 1-amino 95.8 0.0032 1.1E-07 41.9 1.5 48 32-81 87-138 (428)
192 3rq1_A Aminotransferase class 95.7 0.024 8.1E-07 37.5 5.6 38 32-69 84-122 (418)
193 7aat_A Aspartate aminotransfer 95.7 0.033 1.1E-06 36.6 6.0 32 49-80 94-128 (401)
194 1jg8_A L-ALLO-threonine aldola 95.6 0.034 1.2E-06 35.6 5.8 58 8-69 16-73 (347)
195 2fyf_A PSAT, phosphoserine ami 95.5 0.012 4.2E-07 38.8 3.5 61 9-69 52-117 (398)
196 2c0r_A PSAT, phosphoserine ami 95.3 0.018 6.2E-07 37.3 3.8 62 8-69 15-88 (362)
197 2aeu_A Hypothetical protein MJ 95.1 0.068 2.3E-06 35.2 6.2 43 35-81 61-104 (374)
198 3ht4_A Aluminum resistance pro 95.0 0.045 1.5E-06 37.2 5.2 73 7-82 35-114 (431)
199 3f6t_A Aspartate aminotransfer 94.9 0.062 2.1E-06 37.3 5.7 65 4-68 112-183 (533)
200 3vp6_A Glutamate decarboxylase 94.5 0.098 3.3E-06 36.1 5.9 38 35-72 138-177 (511)
201 1qgn_A Protein (cystathionine 94.5 0.13 4.4E-06 35.1 6.4 52 26-81 108-159 (445)
202 2fq6_A Cystathionine beta-lyas 94.0 0.23 7.7E-06 33.5 6.7 43 24-68 74-116 (415)
203 2x3l_A ORN/Lys/Arg decarboxyla 93.8 0.059 2E-06 36.5 3.5 46 32-81 57-102 (446)
204 3jzl_A Putative cystathionine 93.6 0.22 7.4E-06 33.6 6.1 70 8-81 30-107 (409)
205 3cog_A Cystathionine gamma-lya 93.5 0.18 6.1E-06 33.6 5.5 50 27-81 62-111 (403)
206 3k40_A Aromatic-L-amino-acid d 93.5 0.16 5.5E-06 34.6 5.3 39 34-72 115-162 (475)
207 1pff_A Methionine gamma-lyase; 93.4 0.21 7.2E-06 31.8 5.6 42 36-81 2-43 (331)
208 4e1o_A HDC, histidine decarbox 93.4 0.15 5.1E-06 34.8 5.1 39 34-72 120-168 (481)
209 1w23_A Phosphoserine aminotran 93.2 0.091 3.1E-06 33.7 3.7 61 8-68 14-86 (360)
210 3hbx_A GAD 1, glutamate decarb 93.1 0.22 7.7E-06 34.2 5.6 65 7-71 67-139 (502)
211 2z67_A O-phosphoseryl-tRNA(SEC 93.1 0.35 1.2E-05 32.7 6.4 46 34-80 135-181 (456)
212 1js3_A DDC;, DOPA decarboxylas 92.5 0.35 1.2E-05 32.8 5.9 37 35-71 116-161 (486)
213 1ibj_A CBL, cystathionine beta 92.3 0.4 1.4E-05 32.8 6.0 48 29-81 130-177 (464)
214 2zy4_A L-aspartate beta-decarb 92.2 0.7 2.4E-05 32.2 7.2 65 4-68 113-184 (546)
215 3tcm_A Alanine aminotransferas 92.1 0.35 1.2E-05 33.1 5.5 62 8-69 107-177 (500)
216 2a7v_A Serine hydroxymethyltra 91.7 0.31 1.1E-05 33.8 4.9 62 8-69 66-140 (490)
217 4eu1_A Mitochondrial aspartate 91.0 0.092 3.1E-06 34.6 1.6 72 8-81 56-137 (409)
218 1e5e_A MGL, methionine gamma-l 90.9 1.1 3.6E-05 29.8 6.8 39 29-69 59-97 (404)
219 3d6k_A Putative aminotransfera 90.1 0.03 1E-06 37.3 -1.4 36 34-69 78-115 (422)
220 3ihj_A Alanine aminotransferas 89.8 1.9 6.5E-05 29.5 7.4 60 10-69 104-173 (498)
221 1wyu_A Glycine dehydrogenase ( 88.7 0.65 2.2E-05 31.0 4.4 49 32-81 108-156 (438)
222 2r2n_A Kynurenine/alpha-aminoa 88.6 1.7 5.8E-05 28.7 6.4 48 32-81 82-138 (425)
223 3ppl_A Aspartate aminotransfer 88.2 0.97 3.3E-05 29.8 5.0 38 34-71 80-119 (427)
224 3hvy_A Cystathionine beta-lyas 87.7 1.4 4.7E-05 30.0 5.6 69 9-81 46-122 (427)
225 3i16_A Aluminum resistance pro 85.2 5.7 0.00019 26.9 7.5 38 30-68 71-110 (427)
226 1rv3_A Serine hydroxymethyltra 83.4 2.8 9.5E-05 28.5 5.4 73 7-81 55-140 (483)
227 1gmx_A GLPE protein; transfera 73.4 8.4 0.00029 20.5 5.7 47 34-83 45-91 (108)
228 2hox_A ALLIIN lyase 1; cystein 73.2 0.92 3.1E-05 30.4 0.6 21 49-69 123-143 (427)
229 1tq1_A AT5G66040, senescence-a 69.9 11 0.00037 20.9 4.6 42 40-83 74-115 (129)
230 1vpq_A Hypothetical protein TM 68.7 13 0.00043 23.9 5.2 44 29-72 224-269 (273)
231 1c4k_A Protein (ornithine deca 68.7 23 0.00078 25.8 7.0 37 31-69 172-209 (730)
232 3n75_A LDC, lysine decarboxyla 67.7 18 0.00061 26.4 6.2 38 30-69 193-231 (715)
233 3hix_A ALR3790 protein; rhodan 66.0 13 0.00044 19.7 6.0 46 36-83 40-85 (106)
234 2ek0_A Stage V sporulation pro 65.9 14 0.00047 20.0 4.7 39 29-72 11-52 (90)
235 3ilm_A ALR3790 protein; rhodan 64.6 17 0.00058 20.5 5.5 46 36-83 44-89 (141)
236 1vpy_A Protein (hypothetical p 62.9 18 0.00063 23.3 5.1 45 29-73 229-275 (289)
237 3gk5_A Uncharacterized rhodane 62.4 16 0.00054 19.5 5.3 47 33-83 41-87 (108)
238 2fsx_A RV0390, COG0607: rhodan 61.4 20 0.00067 20.2 4.9 34 48-83 80-113 (148)
239 1eg2_A Modification methylase 59.4 7.8 0.00027 25.3 2.9 36 30-65 224-261 (319)
240 2jtq_A Phage shock protein E; 58.4 16 0.00056 18.3 4.3 39 33-71 25-64 (85)
241 1g60_A Adenine-specific methyl 53.1 6.4 0.00022 24.6 1.6 32 34-65 198-231 (260)
242 1vee_A Proline-rich protein fa 52.3 28 0.00096 19.2 4.3 44 37-82 61-106 (134)
243 1rhs_A Sulfur-substituted rhod 49.5 46 0.0016 20.9 5.4 46 36-83 227-273 (296)
244 3k7y_A Aspartate aminotransfer 45.0 62 0.0021 21.4 5.6 48 32-80 76-127 (405)
245 2k42_B Espfu; WAsp, GBD, autoi 44.7 11 0.00036 16.9 1.2 18 6-23 1-18 (36)
246 2vyc_A Biodegradative arginine 41.8 54 0.0018 23.9 5.2 37 32-69 205-241 (755)
247 3bwn_A AT1G70560, L-tryptophan 41.8 19 0.00063 23.5 2.6 20 50-69 92-111 (391)
248 3hzu_A Thiosulfate sulfurtrans 40.6 70 0.0024 20.5 5.5 47 35-83 247-293 (318)
249 2zig_A TTHA0409, putative modi 39.2 14 0.00046 23.6 1.6 32 34-65 221-254 (297)
250 2q5c_A NTRC family transcripti 39.0 62 0.0021 19.4 4.5 21 51-71 162-182 (196)
251 1ixs_A Holliday junction DNA h 38.6 11 0.00039 18.6 0.9 17 3-19 25-41 (62)
252 1boo_A Protein (N-4 cytosine-s 38.4 11 0.00038 24.4 1.1 34 34-68 238-273 (323)
253 1t3k_A Arath CDC25, dual-speci 36.9 58 0.002 18.4 4.0 38 46-83 83-127 (152)
254 3d1p_A Putative thiosulfate su 36.5 53 0.0018 18.0 3.7 32 50-83 93-124 (139)
255 3flh_A Uncharacterized protein 35.9 53 0.0018 17.7 3.8 47 33-83 57-105 (124)
256 3l51_A Structural maintenance 35.8 30 0.001 20.0 2.6 22 62-83 128-149 (161)
257 2oyy_A Hexameric cytochrome; a 35.5 34 0.0012 17.8 2.4 19 54-72 10-28 (76)
258 2lnm_A Protein TIC 40, chlorop 34.7 40 0.0014 16.4 2.6 40 8-47 19-59 (62)
259 2eg4_A Probable thiosulfate su 34.2 74 0.0025 19.1 4.3 32 49-83 185-216 (230)
260 1uar_A Rhodanese; sulfurtransf 33.6 86 0.0029 19.4 6.0 48 35-83 219-267 (285)
261 3tp9_A Beta-lactamase and rhod 33.5 61 0.0021 21.9 4.2 48 33-83 413-460 (474)
262 2qv5_A AGR_C_5032P, uncharacte 31.7 36 0.0012 21.7 2.6 63 4-72 104-176 (261)
263 2l2o_A UPF0727 protein C6ORF11 31.3 22 0.00075 19.2 1.3 23 57-83 41-63 (89)
264 1okg_A Possible 3-mercaptopyru 31.1 91 0.0031 20.6 4.6 46 36-83 228-279 (373)
265 2hhg_A Hypothetical protein RP 31.0 68 0.0023 17.4 4.2 32 50-83 88-119 (139)
266 3aay_A Putative thiosulfate su 30.8 95 0.0033 19.1 6.5 47 36-83 213-260 (277)
267 3olh_A MST, 3-mercaptopyruvate 30.4 80 0.0027 20.0 4.2 46 35-82 240-286 (302)
268 3mvn_A UDP-N-acetylmuramate:L- 29.8 59 0.002 18.6 3.2 23 59-81 47-70 (163)
269 3gqv_A Enoyl reductase; medium 29.5 64 0.0022 20.9 3.6 34 36-69 219-252 (371)
270 3ldg_A Putative uncharacterize 29.4 32 0.0011 23.0 2.2 37 35-71 180-219 (384)
271 1gxj_A SMC, chromosome segrega 29.1 50 0.0017 19.1 2.9 22 62-83 139-160 (186)
272 2drn_C 24-residues peptide fro 28.5 38 0.0013 13.8 1.6 13 10-22 8-20 (26)
273 1wv9_A Rhodanese homolog TT165 28.5 64 0.0022 16.3 4.2 45 34-83 41-85 (94)
274 2wlr_A Putative thiosulfate su 28.3 1.3E+02 0.0045 19.9 6.4 47 35-83 189-236 (423)
275 3uko_A Alcohol dehydrogenase c 28.3 57 0.0019 21.2 3.2 36 36-71 251-286 (378)
276 1rr7_A Middle operon regulator 27.7 47 0.0016 18.7 2.4 17 59-75 51-67 (129)
277 2nly_A BH1492 protein, diverge 27.5 51 0.0018 20.8 2.8 64 3-72 76-149 (245)
278 1e0c_A Rhodanese, sulfurtransf 26.2 1.2E+02 0.004 18.6 5.6 47 35-83 67-115 (271)
279 1qxn_A SUD, sulfide dehydrogen 26.1 89 0.003 17.2 4.0 36 46-83 80-115 (137)
280 3g5j_A Putative ATP/GTP bindin 26.1 81 0.0028 16.8 5.1 45 36-83 77-122 (134)
281 3g68_A Putative phosphosugar i 25.3 94 0.0032 20.3 3.9 22 49-70 208-232 (352)
282 3krt_A Crotonyl COA reductase; 24.6 67 0.0023 21.5 3.1 37 35-71 300-336 (456)
283 3k0b_A Predicted N6-adenine-sp 23.8 47 0.0016 22.2 2.2 37 34-70 186-225 (393)
284 3i2v_A Adenylyltransferase and 23.5 92 0.0031 16.4 3.6 22 50-71 74-95 (127)
285 1yt8_A Thiosulfate sulfurtrans 23.4 1.4E+02 0.005 20.5 4.7 45 36-83 419-463 (539)
286 3odp_A Putative tagatose-6-pho 22.7 1.7E+02 0.0057 19.5 4.7 25 48-72 229-256 (393)
287 3l51_B Structural maintenance 22.6 46 0.0016 19.3 1.8 22 62-83 125-146 (166)
288 1q02_A Sequestosome 1; helical 22.4 78 0.0027 15.2 2.3 16 7-23 5-20 (52)
289 2g9p_A Antimicrobial peptide l 22.2 35 0.0012 13.6 0.8 13 58-70 11-23 (26)
290 2qv6_A MJ0145, GTP cyclohydrol 22.1 1.6E+02 0.0056 18.8 7.6 74 1-74 15-110 (268)
291 2z08_A Universal stress protei 21.9 1E+02 0.0035 16.3 3.1 22 49-70 2-23 (137)
292 1v9v_A KIAA0561 protein; helix 21.3 1E+02 0.0036 17.2 2.9 55 9-72 42-99 (114)
293 1c25_A CDC25A; hydrolase, cell 20.1 1.3E+02 0.0044 16.8 3.8 32 52-83 93-133 (161)
No 1
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.92 E-value=5e-25 Score=152.21 Aligned_cols=83 Identities=24% Similarity=0.305 Sum_probs=74.4
Q ss_pred CccCCCCCCHHHHHHHHHHHHhhc-c--CCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh-----
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALLN-T--NNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH----- 72 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~~-~--~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~----- 72 (83)
|++++||+||+|++|+.+|++++. . ....++++..+|+++|++++|.++++|||++|||||||.|||+||+|
T Consensus 77 ~~~~lGh~~p~v~~Ai~~q~~~l~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~e~AiKlAr~~~~~~g 156 (473)
T 4e3q_A 77 WNMVAGFDHKGLIDAAKAQYERFPGYHAFFGRMSDQTVMLSEKLVEVSPFDSGRVFYTNSGSEANDTMVKMLWFLHAAEG 156 (473)
T ss_dssp TTCTTCSCCHHHHHHHHHHHHHCCCCCCCTTEEEHHHHHHHHHHHHHSSCSSCEEEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred HHhhccCCCHHHHHHHHHHHHhcccccccccccCHHHHHHHHHHHhhCCCCccEEEEeCchHHHHHHHHHHHHHHHHhcC
Confidence 689999999999999999999983 2 23456899999999999999988999999999999999999999987
Q ss_pred -cCCCceEEecC
Q psy6206 73 -TNNDDVITQDQ 83 (83)
Q Consensus 73 -~~r~~ii~~~~ 83 (83)
++|++||+|+|
T Consensus 157 ~~~r~~ii~~~~ 168 (473)
T 4e3q_A 157 KPQKRKILTRWN 168 (473)
T ss_dssp CTTCCEEEEETT
T ss_pred CCCcceEEEeec
Confidence 56789999976
No 2
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.92 E-value=6.4e-25 Score=151.08 Aligned_cols=83 Identities=30% Similarity=0.350 Sum_probs=74.6
Q ss_pred CccCCCCCCHHHHHHHHHHHHhh-ccC-CCCcchHHHHHHHHHHhhCCC-CCCeEEeeCChHHHHHHHHHHHHhhcCCCc
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALL-NTN-NRFLHDNLVLCARKLASLLPD-PLSVCFFVNSGSEANDLALRLARVHTNNDD 77 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~-~~~-~~~~~~~~~~la~~l~~~~p~-~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ 77 (83)
|++++||+||+|++|+.+|++++ +.. ...++++..+|+++|.+++|. +.++|+|+||||||||.|||+||.+++|++
T Consensus 74 ~~~~lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ 153 (456)
T 4atq_A 74 AVTSVGASDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLATGRDA 153 (456)
T ss_dssp HTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCE
T ss_pred HHHhcCCCCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhhhcCCe
Confidence 57899999999999999999998 432 345678899999999999996 478999999999999999999999999999
Q ss_pred eEEecC
Q psy6206 78 VITQDQ 83 (83)
Q Consensus 78 ii~~~~ 83 (83)
||+|+|
T Consensus 154 ii~~~~ 159 (456)
T 4atq_A 154 VVAFDH 159 (456)
T ss_dssp EEEETT
T ss_pred EEEEec
Confidence 999975
No 3
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.89 E-value=2.4e-23 Score=143.34 Aligned_cols=81 Identities=22% Similarity=0.142 Sum_probs=72.0
Q ss_pred CccCCCCCCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
|++++||+||+|++|+.+|+++... ...+++...+|+++|++.+|. +++|+|+||||||||.|||+||.|+||++||+
T Consensus 97 ~~~~lGH~hp~v~~Av~~q~~~~~~-~~~~~~~~~~lae~l~~~~p~-~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~ 174 (454)
T 4ao9_A 97 TAGVYGHSAPEIRDAVIEAMQGGIN-LTGHNLLEGRLARLICERFPQ-IEQLRFTNSGTEANLMALTAALHFTGRRKIVV 174 (454)
T ss_dssp GTTTTCSCCHHHHHHHHHHHHTCSC-CCSEESSHHHHHHHHHHHSTT-CSEEEEESSHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred HhhcccCCCHHHHHHHHHHHhcCCC-ccCCcHHHHHHHHHHHHhCCC-CCEEEEeCchHHHHHHHHHHHHhcccCCeEEE
Confidence 5789999999999999999988632 234566778999999999985 89999999999999999999999999999999
Q ss_pred ecC
Q psy6206 81 QDQ 83 (83)
Q Consensus 81 ~~~ 83 (83)
|+|
T Consensus 175 ~~~ 177 (454)
T 4ao9_A 175 FSG 177 (454)
T ss_dssp ETT
T ss_pred EeC
Confidence 975
No 4
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.87 E-value=1.5e-22 Score=147.12 Aligned_cols=83 Identities=18% Similarity=0.173 Sum_probs=73.2
Q ss_pred CccCCCCC-CHHHHHHHHHHHHhh-cc-CCCCcchHHHHHHHHHHhhCCCC-CCeEEeeCChHHHHHHHHHHH-Hhhc--
Q psy6206 1 MSLPVGHC-HPAVVKAACTQLALL-NT-NNRFLHDNLVLCARKLASLLPDP-LSVCFFVNSGSEANDLALRLA-RVHT-- 73 (83)
Q Consensus 1 ~~~~lGh~-~p~i~~a~~~~~~~~-~~-~~~~~~~~~~~la~~l~~~~p~~-~~~v~f~~sGseA~e~Alk~a-r~~~-- 73 (83)
|++++||+ ||+|++|+.+|++++ +. ...+.+++..+|+++|.+.+|.+ +++|||++|||||||.|||+| |+|+
T Consensus 390 ~~~~lGh~~~p~i~~Ai~~Q~~~l~h~~~~~~~~~~~~~Lae~L~~~~p~~~l~~vff~~SGSeA~E~AlK~A~r~~~~~ 469 (831)
T 4a0g_A 390 WTQGPDPTFQAELAREMGYTAARFGHVMFPENVYEPALKCAELLLDGVGKGWASRVYFSDNGSTAIEIALKMAFRKFCVD 469 (831)
T ss_dssp HTCCCCHHHHHHHHHHHHHHHHHHSSCCCTTEECHHHHHHHHHHHHTTTTTTCCEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred hhcCCCCCCCHHHHHHHHHHHhhcccccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCChhHHHHHHHHHHHHHHHhh
Confidence 68999999 999999999999998 43 23567899999999999999966 789999999999999999999 6664
Q ss_pred ------------CCCceEEecC
Q psy6206 74 ------------NNDDVITQDQ 83 (83)
Q Consensus 74 ------------~r~~ii~~~~ 83 (83)
+|++||+|++
T Consensus 470 ~g~~~~~~~~~~~r~~iI~~~~ 491 (831)
T 4a0g_A 470 HNFCEATEEEKHIVVKVIALRG 491 (831)
T ss_dssp TTC---------CCEEEEEETT
T ss_pred cCCCccccccccCccEEEEecC
Confidence 4778999975
No 5
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.80 E-value=3.8e-19 Score=122.11 Aligned_cols=83 Identities=27% Similarity=0.335 Sum_probs=74.0
Q ss_pred CccCCCCCCHHHHHHHHHHHHhhc-cCC-CCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh------
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALLN-TNN-RFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH------ 72 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~~-~~~-~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~------ 72 (83)
|++++||+||+|++|+.+|++++. .+. .++++...+|+++|.+..|.+.++|+|++||+||++.|||++|.+
T Consensus 64 ~~~~lGh~~p~v~~A~~~~l~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Aik~a~~~~~~~g~ 143 (476)
T 3i5t_A 64 WCAQVGYGRREIVDAMAHQAMVLPYASPWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSALRFSEFYNNVLGR 143 (476)
T ss_dssp HTCTTCBCCHHHHHHHHHHHHHCCCCCTTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhccCCCCCHHHHHHHHHHHHhccCcccCccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCC
Confidence 468899999999999999999873 233 577889999999999999877889999999999999999999999
Q ss_pred cCCCceEEecC
Q psy6206 73 TNNDDVITQDQ 83 (83)
Q Consensus 73 ~~r~~ii~~~~ 83 (83)
++|.+||++++
T Consensus 144 ~~~~~vi~~~~ 154 (476)
T 3i5t_A 144 PQKKRIIVRYD 154 (476)
T ss_dssp TTCCEEEEETT
T ss_pred CCCCEEEEEcC
Confidence 88999998864
No 6
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.79 E-value=5.1e-19 Score=121.50 Aligned_cols=83 Identities=28% Similarity=0.383 Sum_probs=72.8
Q ss_pred CccCCCCCCHHHHHHHHHHHHhhc-c--CCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh-----
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALLN-T--NNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH----- 72 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~~-~--~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~----- 72 (83)
|++++||+||+|++|+.+|++++. . ...++++...+|+++|.+..|.+.++|+|++||+||+|.|+|++|.+
T Consensus 65 ~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~~aik~a~~~~~~~g 144 (472)
T 3hmu_A 65 WCVNIGYGRDELAEVAARQMRELPYYNTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEANDTNIRMVRTYWQNKG 144 (472)
T ss_dssp HTCTTCBCCHHHHHHHHHHHHHCSCCCSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred hhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHHHhcC
Confidence 468999999999999999999873 2 23567888999999999999877889999999999999999999998
Q ss_pred -cCCCceEEecC
Q psy6206 73 -TNNDDVITQDQ 83 (83)
Q Consensus 73 -~~r~~ii~~~~ 83 (83)
++|.+||+|++
T Consensus 145 ~~~~~~ii~~~~ 156 (472)
T 3hmu_A 145 QPEKTVIISRKN 156 (472)
T ss_dssp CTTCCEEEEETT
T ss_pred CCCCCEEEEEcC
Confidence 47889998864
No 7
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.78 E-value=8.3e-19 Score=119.94 Aligned_cols=83 Identities=27% Similarity=0.368 Sum_probs=73.5
Q ss_pred CccCCCCCCHHHHHHHHHHHHhh-ccC-CCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh------
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALL-NTN-NRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH------ 72 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~-~~~-~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~------ 72 (83)
|++++||+||+|++|+.+|++++ +.. +.++++...+|+++|.+.+|.+.++|+|++||+||+|.|+|+++.+
T Consensus 85 ~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~~~~g~ 164 (457)
T 3tfu_A 85 WTAIHGHGHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAAKMALQYWRGRGL 164 (457)
T ss_dssp HTCTTCBTCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhhccCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHHHHHHHHHHHhcCC
Confidence 46899999999999999999987 333 4567888999999999999877889999999999999999999998
Q ss_pred cCCCceEEecC
Q psy6206 73 TNNDDVITQDQ 83 (83)
Q Consensus 73 ~~r~~ii~~~~ 83 (83)
+||.+||++++
T Consensus 165 ~g~~~ii~~~~ 175 (457)
T 3tfu_A 165 PGKRRLMTWRG 175 (457)
T ss_dssp TTCCEEEEETT
T ss_pred CCCceEEEEcC
Confidence 88889998753
No 8
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.77 E-value=1.4e-18 Score=118.30 Aligned_cols=83 Identities=30% Similarity=0.340 Sum_probs=72.5
Q ss_pred CccCCCCCCHHHHHHHHHHHHhh-ccC-CCCcchHHHHHHHHHHhhCCCC-CCeEEeeCChHHHHHHHHHHHHhhcCCCc
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALL-NTN-NRFLHDNLVLCARKLASLLPDP-LSVCFFVNSGSEANDLALRLARVHTNNDD 77 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~-~~~-~~~~~~~~~~la~~l~~~~p~~-~~~v~f~~sGseA~e~Alk~ar~~~~r~~ 77 (83)
|++++||+||+|++|+.+|++++ +.. ..++++...+|+++|.+..|.+ .++|+|++||+||++.|+|++|.++||.+
T Consensus 71 ~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~Alk~a~~~~g~~~ 150 (451)
T 3oks_A 71 AVTTVGNSAPKVVEAVRSQVGDFTHTCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVENAVKIARSHTHKPA 150 (451)
T ss_dssp HTCTTCTTCHHHHHHHHHHHTTCSCCTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHHHHHHHHHHHCCCE
T ss_pred cccccCCCCHHHHHHHHHHHHhcccccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHHHHHHHHHhcCCCe
Confidence 36789999999999999999887 332 3567888899999999999853 57999999999999999999999999999
Q ss_pred eEEecC
Q psy6206 78 VITQDQ 83 (83)
Q Consensus 78 ii~~~~ 83 (83)
||++++
T Consensus 151 ii~~~~ 156 (451)
T 3oks_A 151 VVAFDH 156 (451)
T ss_dssp EEEETT
T ss_pred EEEEcC
Confidence 998864
No 9
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.77 E-value=1.9e-18 Score=117.83 Aligned_cols=83 Identities=30% Similarity=0.330 Sum_probs=72.6
Q ss_pred CccCCCCCCHHHHHHHHHHHHhh-ccC-CCCcchHHHHHHHHHHhhCCCC-CCeEEeeCChHHHHHHHHHHHHhhcCCCc
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALL-NTN-NRFLHDNLVLCARKLASLLPDP-LSVCFFVNSGSEANDLALRLARVHTNNDD 77 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~-~~~-~~~~~~~~~~la~~l~~~~p~~-~~~v~f~~sGseA~e~Alk~ar~~~~r~~ 77 (83)
|++++||+||+|++|+.+|++++ +.. ..++++...+|+++|.+..|.+ .++|+|++||+||++.|+|++|.++||.+
T Consensus 74 ~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~alk~a~~~~g~~~ 153 (453)
T 4ffc_A 74 AVTTVGASHPAVAAAIADQATHFTHTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVENAIKVARLATGRPA 153 (453)
T ss_dssp HTCTTCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCE
T ss_pred ccCcCCCCCHHHHHHHHHHHHhccccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHHHHHHHHHhcCCCE
Confidence 36789999999999999999987 332 3567888899999999999854 57999999999999999999999999999
Q ss_pred eEEecC
Q psy6206 78 VITQDQ 83 (83)
Q Consensus 78 ii~~~~ 83 (83)
||++++
T Consensus 154 ii~~~~ 159 (453)
T 4ffc_A 154 VVAFDN 159 (453)
T ss_dssp EEEETT
T ss_pred EEEEcC
Confidence 998864
No 10
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.61 E-value=5.8e-20 Score=126.73 Aligned_cols=81 Identities=31% Similarity=0.352 Sum_probs=72.2
Q ss_pred CccCCCCCCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
|++++||+||+|++|+.+|+++.. ...++++...+|+++|++..| +.++|+|++||+||+|.|+|+||.++||.+||+
T Consensus 110 ~~~~lGh~~p~V~~Av~~q~~~~~-~~~~~~~~~~~Lae~L~~~~p-~~~~v~~~nSGseA~~~Aik~ar~~tgr~~ii~ 187 (465)
T 2yky_A 110 TAGLFGHSHPVIRAAVERALAVGL-NLSTQTENEALFAEAVCDRFP-SIDLVRFTNSGTEANLMALATATAITGRKTVLA 187 (465)
Confidence 457899999999999999998852 235678888999999999998 578999999999999999999999999999999
Q ss_pred ecC
Q psy6206 81 QDQ 83 (83)
Q Consensus 81 ~~~ 83 (83)
|++
T Consensus 188 ~~~ 190 (465)
T 2yky_A 188 FDG 190 (465)
Confidence 874
No 11
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.75 E-value=1.1e-17 Score=112.69 Aligned_cols=81 Identities=30% Similarity=0.342 Sum_probs=71.7
Q ss_pred CccCCCCCCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
|++++||+||+|++++.+|+++... ..++++...+|+++|.+..| +.++|+|++||+||++.|+|++|.+++|.+||+
T Consensus 63 ~~~~lG~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~-~~~~v~~~~sGsea~~~al~~a~~~~~~~~ii~ 140 (429)
T 4e77_A 63 GPMILGHNHPAIRQAVIEAVERGLS-FGAPTEMEVKMAQLVTDLVP-TMDMVRMVNSGTEATMSAIRLARGYTGRDKIIK 140 (429)
T ss_dssp TTCTTCBTCHHHHHHHHHHHTTCSC-CSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred hccccCCCCHHHHHHHHHHHHhCcc-cCCCCHHHHHHHHHHHhhCC-CCCEEEEeCcHHHHHHHHHHHHHHhhCCCEEEE
Confidence 4678999999999999999988632 24678888999999999998 578999999999999999999999999999998
Q ss_pred ecC
Q psy6206 81 QDQ 83 (83)
Q Consensus 81 ~~~ 83 (83)
+++
T Consensus 141 ~~~ 143 (429)
T 4e77_A 141 FEG 143 (429)
T ss_dssp ETT
T ss_pred EcC
Confidence 753
No 12
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.74 E-value=2.5e-17 Score=110.98 Aligned_cols=81 Identities=26% Similarity=0.198 Sum_probs=71.8
Q ss_pred CccCCCCCCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
|++++||+||+|++|+.+|+++... ..++++...+|+++|.+..| +.++|+|++||+||++.|+|+++.++++.+||.
T Consensus 63 ~~~~lG~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~l~~~la~~~~-~~~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~ 140 (429)
T 3k28_A 63 GPLIHGHANDRVVEALKAVAERGTS-FGAPTEIENKLAKLVIERVP-SIEIVRMVNSGTEATMSALRLARGYTGRNKILK 140 (429)
T ss_dssp TTCTTCBSCHHHHHHHHHHHHHCSC-CSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred hhcccCCCCHHHHHHHHHHHhhCcC-cCCCCHHHHHHHHHHHHhCC-CCCEEEEeCChHHHHHHHHHHHHHhhCCCEEEE
Confidence 4689999999999999999988632 34678888999999999998 578999999999999999999999999999998
Q ss_pred ecC
Q psy6206 81 QDQ 83 (83)
Q Consensus 81 ~~~ 83 (83)
+++
T Consensus 141 ~~~ 143 (429)
T 3k28_A 141 FIG 143 (429)
T ss_dssp EET
T ss_pred ECC
Confidence 753
No 13
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.73 E-value=3.3e-17 Score=110.33 Aligned_cols=81 Identities=28% Similarity=0.285 Sum_probs=71.9
Q ss_pred CccCCCCCCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
|++++||+||+|++++.+|+++... ..++++...+|+++|.+..| +.++|+|++||+||++.|+|+++.++++.+||+
T Consensus 65 ~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~l~~~la~~~~-~~~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~ 142 (434)
T 3l44_A 65 GPIITGHAHPHITKAITTAAENGVL-YGTPTALEVKFAKMLKEAMP-ALDKVRFVNSGTEAVMTTIRVARAYTGRTKIMK 142 (434)
T ss_dssp TTCSSCBTCHHHHHHHHHHHHHCSC-CSSCCHHHHHHHHHHHHHCT-TCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred hccccCCCCHHHHHHHHHHHHhCcC-CCCCCHHHHHHHHHHHHhCC-CCCEEEEeCchHHHHHHHHHHHHHhhCCCEEEE
Confidence 5689999999999999999988632 35678888999999999998 578999999999999999999999999999998
Q ss_pred ecC
Q psy6206 81 QDQ 83 (83)
Q Consensus 81 ~~~ 83 (83)
+++
T Consensus 143 ~~~ 145 (434)
T 3l44_A 143 FAG 145 (434)
T ss_dssp ETT
T ss_pred EcC
Confidence 753
No 14
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.73 E-value=2.4e-17 Score=112.25 Aligned_cols=83 Identities=20% Similarity=0.235 Sum_probs=72.0
Q ss_pred CccCCCCCCHHHHHHHHHHHHhhc-c--CCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh-----
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALLN-T--NNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH----- 72 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~~-~--~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~----- 72 (83)
|++++||+||+|++|+.+|++++. . ...++++...+|+++|.+..|.+.++|+|++||+||++.|+|+++.+
T Consensus 61 ~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~al~~~~~~~~~~g 140 (460)
T 3gju_A 61 YCVNVGYGRQKIADAIATQAKNLAYYHAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANETNIKLIWYYNNVLG 140 (460)
T ss_dssp HTCTTCBCCHHHHHHHHHHHHHHSCCCCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred hhccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcC
Confidence 367899999999999999998873 2 23566788899999999998877889999999999999999999988
Q ss_pred -cCCCceEEecC
Q psy6206 73 -TNNDDVITQDQ 83 (83)
Q Consensus 73 -~~r~~ii~~~~ 83 (83)
++|.+||++++
T Consensus 141 ~~~~~~vi~~~~ 152 (460)
T 3gju_A 141 RPEKKKIISRWR 152 (460)
T ss_dssp CTTCCEEEEETT
T ss_pred CCCCCEEEEECC
Confidence 57889998763
No 15
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.72 E-value=1.8e-17 Score=112.39 Aligned_cols=83 Identities=22% Similarity=0.246 Sum_probs=72.4
Q ss_pred CccCCCCCCHHHHHHHHHHHHhh-cc-CCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh---cC-
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALL-NT-NNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH---TN- 74 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~-~~-~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~---~~- 74 (83)
|++++||+||+|++|+.+|++++ +. ...++++...+|+++|.+..|.+.++|+|++||+||++.|+|+++.+ +|
T Consensus 54 ~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~al~~~~~~~~~~G~ 133 (448)
T 3dod_A 54 WLNVHGHRKKELDDAIKKQLGKIAHSTLLGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEIALKMAFQYWKNIGK 133 (448)
T ss_dssp HTCSSCBSCHHHHHHHHHHHTTCSCCCCSSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhhCC
Confidence 46789999999999999999887 32 34567788899999999999877789999999999999999999998 88
Q ss_pred --CCceEEecC
Q psy6206 75 --NDDVITQDQ 83 (83)
Q Consensus 75 --r~~ii~~~~ 83 (83)
|.+||++++
T Consensus 134 ~~~~~vi~~~~ 144 (448)
T 3dod_A 134 PEKQKFIAMKN 144 (448)
T ss_dssp TTCCEEEEEC-
T ss_pred CCCCEEEEECC
Confidence 889998763
No 16
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.72 E-value=4.7e-17 Score=110.77 Aligned_cols=83 Identities=25% Similarity=0.297 Sum_probs=72.1
Q ss_pred CccCCCCCCHHHHHHHHHHHHhhc--c-CCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh-----
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALLN--T-NNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH----- 72 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~~--~-~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~----- 72 (83)
|++++||+||+|++|+.+|++++. . ...++++...+|+++|.+..|.+.++|+|++||+||++.|+|+++.+
T Consensus 60 ~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g 139 (459)
T 4a6r_A 60 WCVNVGYGRKDFAEAARRQMEELPFYNTFFKTTHPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQG 139 (459)
T ss_dssp HTCTTCBCCHHHHHHHHHHHHHCSCCCTTSSSCCHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred hcccCCCCCHHHHHHHHHHHHhccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhcC
Confidence 368899999999999999999863 2 23567888899999999999887889999999999999999999987
Q ss_pred -cCCCceEEecC
Q psy6206 73 -TNNDDVITQDQ 83 (83)
Q Consensus 73 -~~r~~ii~~~~ 83 (83)
+++.+||++++
T Consensus 140 ~~~~~~vi~~~~ 151 (459)
T 4a6r_A 140 KPEKKTLIGRWN 151 (459)
T ss_dssp CTTCCEEEEETT
T ss_pred CCCCCEEEEECC
Confidence 47888998763
No 17
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.71 E-value=8.7e-17 Score=108.07 Aligned_cols=81 Identities=26% Similarity=0.298 Sum_probs=71.2
Q ss_pred CccCCCCCCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
|++++||+||+|++++.+++++... ..++++...+|+++|.+..| +.++|+|++||+||++.|+|++|.++++.+||+
T Consensus 62 ~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~la~~l~~~~~-~~~~v~~~~ggsea~~~al~~a~~~~~~~~vi~ 139 (427)
T 3fq8_A 62 GPAICGHAHPEVIEALKVAMEKGTS-FGAPCALENVLAEMVNDAVP-SIEMVRFVNSGTEACMAVLRIMRAYTGRDKIIK 139 (427)
T ss_dssp TTCTTCBTCHHHHHHHHHHHTTCSC-CSSCCHHHHHHHHHHHHHST-TCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred hhhccCCCCHHHHHHHHHHHHhCCC-cCCCCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEE
Confidence 4689999999999999999988632 23477888999999999998 578999999999999999999999999999998
Q ss_pred ecC
Q psy6206 81 QDQ 83 (83)
Q Consensus 81 ~~~ 83 (83)
+++
T Consensus 140 ~~~ 142 (427)
T 3fq8_A 140 FEG 142 (427)
T ss_dssp EET
T ss_pred ECC
Confidence 753
No 18
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.69 E-value=6.3e-17 Score=109.65 Aligned_cols=82 Identities=28% Similarity=0.317 Sum_probs=70.9
Q ss_pred CccCCCCCCHHHHHHHHHHHHhh-ccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh---c---
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH---T--- 73 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~---~--- 73 (83)
|++++||+||+|++|+.+|++++ +....++++...+++++|.+..|.+.+ |+|++||+||++.|+|+++.+ +
T Consensus 59 ~~~~lG~~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~-v~~~~ggseA~~~al~~~~~~~~~~g~~ 137 (452)
T 3n5m_A 59 WCVNSGYGRKELAEAAYKQLQTLSYFPMSQSHEPAIKLAEKLNEWLGGEYV-IFFSNSGSEANETAFKIARQYYAQKGEP 137 (452)
T ss_dssp HTCTTCBCCHHHHHHHHHHHTTCCCCCTTSEEHHHHHHHHHHHHHHTSCEE-EEEESSHHHHHHHHHHHHHHHHHTTTCT
T ss_pred hhccCCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHHhCCCCce-EEEeCchHHHHHHHHHHHHHHHHhcCCC
Confidence 46899999999999999999887 433456788889999999999887666 999999999999999999987 6
Q ss_pred CCCceEEecC
Q psy6206 74 NNDDVITQDQ 83 (83)
Q Consensus 74 ~r~~ii~~~~ 83 (83)
++.+||++++
T Consensus 138 ~~~~vi~~~~ 147 (452)
T 3n5m_A 138 HRYKFMSRYR 147 (452)
T ss_dssp TCCEEEEETT
T ss_pred CCCEEEEECC
Confidence 7888998763
No 19
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.69 E-value=6.1e-17 Score=111.09 Aligned_cols=72 Identities=22% Similarity=0.263 Sum_probs=56.8
Q ss_pred CccCCCCCCHHHHHHHHHHHHhh--ccCCCC----cchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALL--NTNNRF----LHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH 72 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~--~~~~~~----~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~ 72 (83)
|++++||+||+|++|+.+|+... ...+.+ ..+....++++|.+..|.+.++|+|++||+||||.|+|++|+|
T Consensus 73 ~~~~lGh~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~l~~~~~~~~~~v~f~~sGseA~~~Aik~a~~~ 150 (472)
T 1ohv_A 73 SSIPIGYSHPALVKLVQQPQNVSTFINRPALGILPPENFVEKLRESLLSVAPKGMSQLITMACGSCSNENAFKTIFMW 150 (472)
T ss_dssp HTCSSCBTCHHHHHHHHCGGGHHHHHCCCCTTTSCBTTHHHHHHHTGGGGCCTTCCEEEEESSHHHHHHHHHHHHHHH
T ss_pred hhcccCCCCHHHHHHHHHHHhhcccccccccccccHHHHHHHHHHHHHHhCCCCcCEEEEeCCchhHHHHHHHHHHHH
Confidence 35789999999999999987543 111112 2456677777788888777889999999999999999999865
No 20
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.67 E-value=1.7e-16 Score=107.91 Aligned_cols=83 Identities=25% Similarity=0.262 Sum_probs=70.0
Q ss_pred CccCCCCCCHHHH-H-HHHH---HHHhh-ccCCCCcchHHHHHHHHHHhhCC-CCCCeEEeeCChHHHHHHHHHHHHhhc
Q psy6206 1 MSLPVGHCHPAVV-K-AACT---QLALL-NTNNRFLHDNLVLCARKLASLLP-DPLSVCFFVNSGSEANDLALRLARVHT 73 (83)
Q Consensus 1 ~~~~lGh~~p~i~-~-a~~~---~~~~~-~~~~~~~~~~~~~la~~l~~~~p-~~~~~v~f~~sGseA~e~Alk~ar~~~ 73 (83)
|++++||+||+|+ + |+.+ |+++. +..+.++++...+++++|.+..+ .+.++|+|++||+||++.|+|++|.++
T Consensus 64 ~~~~lG~~~p~v~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~la~~la~~~~~~~~~~v~~~~~gseA~~~aik~a~~~~ 143 (449)
T 2cjg_A 64 ASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWK 143 (449)
T ss_dssp HTCSSCBSCHHHHTCHHHHHHHHHHHTCCCCTTTCCCHHHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCHHHHHHHHHHHHHHHHHhcCCCCcccCCHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHHh
Confidence 3578999999999 9 9999 88776 33345677888999999999885 457899999999999999999999876
Q ss_pred C------------CCceEEecC
Q psy6206 74 N------------NDDVITQDQ 83 (83)
Q Consensus 74 ~------------r~~ii~~~~ 83 (83)
+ +.+||++++
T Consensus 144 ~~~~~~~~~~~~~~~~Vi~~~~ 165 (449)
T 2cjg_A 144 SRHNQAHGIDPALGTQVLHLRG 165 (449)
T ss_dssp HHHHHHTTSCTTCCCEEEEETT
T ss_pred cccccccccccCCCCEEEEECC
Confidence 5 778998863
No 21
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.64 E-value=2.2e-15 Score=101.25 Aligned_cols=81 Identities=32% Similarity=0.283 Sum_probs=70.5
Q ss_pred CccCCCCCCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
|++++||+||+|++++.+++++... ..++++...++++.|.+..| +.++|+|++||+||++.|+|+||.++++.+||.
T Consensus 62 ~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~-~~~~v~~~~~g~ea~~~al~~ar~~~~~~~vi~ 139 (424)
T 2e7u_A 62 GPLILGHAHPKVLARVRETLERGLT-FGAPSPLEVALAKKVKRAYP-FVDLVRFVNSGTEATMSALRLARGYTGRPYIVK 139 (424)
T ss_dssp TTCTTCBTCHHHHHHHHHHHHTCSC-CSSCCHHHHHHHHHHHHHCT-TCCEEEEESSHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred cccccCCCCHHHHHHHHHHHHhCCC-CCCCCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEE
Confidence 4578999999999999999987522 34667888999999999987 678999999999999999999999999989998
Q ss_pred ecC
Q psy6206 81 QDQ 83 (83)
Q Consensus 81 ~~~ 83 (83)
+++
T Consensus 140 ~~~ 142 (424)
T 2e7u_A 140 FRG 142 (424)
T ss_dssp ETT
T ss_pred ECC
Confidence 763
No 22
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.63 E-value=2.2e-15 Score=101.53 Aligned_cols=80 Identities=35% Similarity=0.312 Sum_probs=69.8
Q ss_pred CccCCCCCCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
|++++||+||+|++++.+++++.. ...++++...+++++|.+..| +.++|+|++||+||++.|+++||.++++.+||.
T Consensus 66 ~~~~lG~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~l~~~la~~~~-~~~~v~~~~sgseA~~~al~~ar~~~~~~~vi~ 143 (434)
T 2epj_A 66 GPLILGHKHPRVLEAVEEALARGW-LYGAPGEAEVLLAEKILGYVK-RGGMIRFVNSGTEATMTAIRLARGYTGRDLILK 143 (434)
T ss_dssp TTCTTCBTCHHHHHHHHHHHHTCS-CCSSCCHHHHHHHHHHHHHHC-TTCEEEEESSHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred hcccCCCCCHHHHHHHHHHHHhCC-CCCCCCHHHHHHHHHHHHhCC-CCCEEEEeCCHHHHHHHHHHHHHHhhCCCeEEE
Confidence 356899999999999999998852 234677888999999999887 578999999999999999999999999889998
Q ss_pred ec
Q psy6206 81 QD 82 (83)
Q Consensus 81 ~~ 82 (83)
++
T Consensus 144 ~~ 145 (434)
T 2epj_A 144 FD 145 (434)
T ss_dssp EE
T ss_pred Ec
Confidence 76
No 23
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.62 E-value=3.4e-15 Score=100.37 Aligned_cols=81 Identities=31% Similarity=0.318 Sum_probs=70.8
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhc-c-CCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh------c
Q psy6206 2 SLPVGHCHPAVVKAACTQLALLN-T-NNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH------T 73 (83)
Q Consensus 2 ~~~lGh~~p~i~~a~~~~~~~~~-~-~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~------~ 73 (83)
++++||++|+|++++.++++.+. . ...++++...+++++|.+..|.+.++|+|++||+||++.|+|+++.+ +
T Consensus 40 ~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~ 119 (430)
T 3i4j_A 40 VANIGHGRAEVGERMAAQAARLPFVHGSQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATESAVKLARQYHVERGEP 119 (430)
T ss_dssp TCTTCBCCHHHHHHHHHHHHHCCCCCTTTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred ccccCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHHHHhcCCC
Confidence 67899999999999999998863 2 23567788899999999999877889999999999999999999988 7
Q ss_pred CCCceEEec
Q psy6206 74 NNDDVITQD 82 (83)
Q Consensus 74 ~r~~ii~~~ 82 (83)
++.+||+++
T Consensus 120 ~~~~vi~~~ 128 (430)
T 3i4j_A 120 GRFKVITRV 128 (430)
T ss_dssp TCCEEEEET
T ss_pred CCcEEEEEe
Confidence 788888765
No 24
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.62 E-value=4.6e-15 Score=99.69 Aligned_cols=81 Identities=27% Similarity=0.475 Sum_probs=70.3
Q ss_pred ccCCCCCCHHHHHHHHHHHHhh-ccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 2 SLPVGHCHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 2 ~~~lGh~~p~i~~a~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
++++||+||+|++++.+++++. +....++++...+++++|.+..|.+.++|+|++||+||++.|+|+++.++++.+||+
T Consensus 54 ~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~ 133 (433)
T 1zod_A 54 SAVLGHCHPEIVSVIGEYAGKLDHLFSEMLSRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVG 133 (433)
T ss_dssp TCTTCBTCHHHHHHHHHHHHHCCCCCTTCCCHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred ccccCCCCHHHHHHHHHHHHhCcccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCeEEE
Confidence 4689999999999999999876 333456777889999999999986678999999999999999999998888888987
Q ss_pred ec
Q psy6206 81 QD 82 (83)
Q Consensus 81 ~~ 82 (83)
++
T Consensus 134 ~~ 135 (433)
T 1zod_A 134 FA 135 (433)
T ss_dssp ET
T ss_pred EC
Confidence 75
No 25
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.61 E-value=4.5e-15 Score=100.04 Aligned_cols=81 Identities=27% Similarity=0.265 Sum_probs=70.8
Q ss_pred ccCCCCCCHHHHHHHHHHHHhh-cc-CCCCcchHHHHHHHHHHhhCCCCC-CeEEeeCChHHHHHHHHHHHHhhcCCCce
Q psy6206 2 SLPVGHCHPAVVKAACTQLALL-NT-NNRFLHDNLVLCARKLASLLPDPL-SVCFFVNSGSEANDLALRLARVHTNNDDV 78 (83)
Q Consensus 2 ~~~lGh~~p~i~~a~~~~~~~~-~~-~~~~~~~~~~~la~~l~~~~p~~~-~~v~f~~sGseA~e~Alk~ar~~~~r~~i 78 (83)
++++||+||+|++++.+++++. +. ...++++...+++++|.+..|.+. ++++|++||+||++.|+|++|.++++.+|
T Consensus 54 ~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~~v 133 (439)
T 3dxv_A 54 AASLGYGHPAIVAAVSAAAANPAGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDANEAAYRAIVKATGRSGV 133 (439)
T ss_dssp TCTTCBSCHHHHHHHHHHHHSCSCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHHHHHHHHHHHHHSCCEE
T ss_pred hccCCCCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHHHHHHHHHHHHhCCCEE
Confidence 5679999999999999999886 22 245677888999999999998667 69999999999999999999999888899
Q ss_pred EEec
Q psy6206 79 ITQD 82 (83)
Q Consensus 79 i~~~ 82 (83)
|.++
T Consensus 134 i~~~ 137 (439)
T 3dxv_A 134 IAFA 137 (439)
T ss_dssp EEET
T ss_pred EEEC
Confidence 8875
No 26
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.59 E-value=6e-15 Score=99.96 Aligned_cols=79 Identities=32% Similarity=0.545 Sum_probs=66.8
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhc-cCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh--------
Q psy6206 2 SLPVGHCHPAVVKAACTQLALLN-TNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH-------- 72 (83)
Q Consensus 2 ~~~lGh~~p~i~~a~~~~~~~~~-~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~-------- 72 (83)
++++||+||+|++++.+|+++.. ....++++...+++++|.+..+ .++|+|++||+||++.|+|++|.|
T Consensus 76 ~~~lgh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~ 153 (433)
T 1z7d_A 76 SVNQGHCHPNILNAMINQAKNLTICSRAFFSVPLGICERYLTNLLG--YDKVLMMNTGAEANETAYKLCRKWGYEVKKIP 153 (433)
T ss_dssp TTTTCBTCHHHHHHHHHHHTTCSCCCTTSEEHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred hcccCCCCHHHHHHHHHHHHhCCCccCCcCCHHHHHHHHHHHhhcC--CCeEEEeCCHHHHHHHHHHHHHHHhhhccCCC
Confidence 46899999999999999998863 3334667888999999999884 679999999999999999999875
Q ss_pred cCCCceEEec
Q psy6206 73 TNNDDVITQD 82 (83)
Q Consensus 73 ~~r~~ii~~~ 82 (83)
.||.+||+++
T Consensus 154 ~gr~~vi~~~ 163 (433)
T 1z7d_A 154 ENMAKIVVCK 163 (433)
T ss_dssp TTCCEEEEET
T ss_pred CCCCeEEEEe
Confidence 3667898876
No 27
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.57 E-value=1.4e-14 Score=96.33 Aligned_cols=79 Identities=27% Similarity=0.356 Sum_probs=68.2
Q ss_pred ccCCCCCCHHHHHHHHHHHHhh-ccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh-----cCC
Q psy6206 2 SLPVGHCHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH-----TNN 75 (83)
Q Consensus 2 ~~~lGh~~p~i~~a~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~-----~~r 75 (83)
++++||+||+|++++.+++++. +..+.++++...+++++|.+..+ .++++|++||+||++.|+++++.+ +++
T Consensus 47 ~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~--~~~v~~~~gg~ea~~~al~~~~~~~~~~g~~~ 124 (395)
T 3nx3_A 47 VCALGYNHAKFNAKIKAQVDKLLHTSNLYYNENIAAAAKNLAKASA--LERVFFTNSGTESIEGAMKTARKYAFNKGVKG 124 (395)
T ss_dssp TCTTCBSCHHHHHHHHHHHTTCSCCCTTSBCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred hccCCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHHHHHHHHHHHhhccCCCC
Confidence 5789999999999999999886 33445677888999999999885 579999999999999999999988 678
Q ss_pred CceEEec
Q psy6206 76 DDVITQD 82 (83)
Q Consensus 76 ~~ii~~~ 82 (83)
.+||+++
T Consensus 125 ~~vi~~~ 131 (395)
T 3nx3_A 125 GQFIAFK 131 (395)
T ss_dssp CEEEEET
T ss_pred CEEEEEc
Confidence 8888765
No 28
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.57 E-value=2.6e-14 Score=96.82 Aligned_cols=80 Identities=29% Similarity=0.339 Sum_probs=69.7
Q ss_pred CccCCCCCCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
|+.++||+||+|++++.++++... ...++++...++++.|.+..| +.++|+|++||+||++.|+++||.++++.+||.
T Consensus 67 ~~~~lg~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~la~~l~~~~~-~~~~v~~~~gg~eA~~~al~~ar~~~~~~~vi~ 144 (453)
T 2cy8_A 67 GALVLGHGHPRVNAAIAEALSHGV-QYAASHPLEVRWAERIVAAFP-SIRKLRFTGSGTETTLLALRVARAFTGRRMILR 144 (453)
T ss_dssp TSCTTCBTCHHHHHHHHHHHTTTC-SSCSSCHHHHHHHHHHHHHCT-TCSEEEEESCHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred hhcccCCCCHHHHHHHHHHHHhCC-CCCCCCHHHHHHHHHHHhhCC-CCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEE
Confidence 457799999999999999998752 234677888999999999887 678999999999999999999999988888988
Q ss_pred ec
Q psy6206 81 QD 82 (83)
Q Consensus 81 ~~ 82 (83)
++
T Consensus 145 ~~ 146 (453)
T 2cy8_A 145 FE 146 (453)
T ss_dssp EC
T ss_pred Ec
Confidence 76
No 29
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.57 E-value=8.8e-15 Score=99.39 Aligned_cols=79 Identities=27% Similarity=0.420 Sum_probs=65.9
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhc-cCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh--------
Q psy6206 2 SLPVGHCHPAVVKAACTQLALLN-TNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH-------- 72 (83)
Q Consensus 2 ~~~lGh~~p~i~~a~~~~~~~~~-~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~-------- 72 (83)
++++||+||+|++++.+|+++.. .+..++++...+++++|.+..+ .++|+|++||+||++.|+|+++.|
T Consensus 87 ~~~lgh~~p~v~~Ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~ 164 (439)
T 2oat_A 87 AVNQGHCHPKIVNALKSQVDKLTLTSRAFYNNVLGEYEEYITKLFN--YHKVLPMNTGVEAGETACKLARKWGYTVKGIQ 164 (439)
T ss_dssp TTTTCBTCHHHHHHHHHHHTTCSCCCTTSEESSHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred cccCCCCCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHHhcC--CCEEEEeCCHHHHHHHHHHHHHHHhhhccCCC
Confidence 56899999999999999998863 3334566778899999999873 679999999999999999999875
Q ss_pred cCCCceEEec
Q psy6206 73 TNNDDVITQD 82 (83)
Q Consensus 73 ~~r~~ii~~~ 82 (83)
.||.+||+++
T Consensus 165 ~g~~~vi~~~ 174 (439)
T 2oat_A 165 KYKAKIVFAA 174 (439)
T ss_dssp TTCCEEEEET
T ss_pred CCCCeEEEEc
Confidence 2667888876
No 30
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.54 E-value=4.2e-14 Score=95.31 Aligned_cols=80 Identities=35% Similarity=0.480 Sum_probs=67.8
Q ss_pred CccCCCCCCHHHHHHHHHHHHhh-ccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh------c
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH------T 73 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~------~ 73 (83)
|+.++||++|+|++++.+++++. +....++++...+++++|.+..+ .++|+|++||+||++.|+|+++.+ +
T Consensus 67 ~~~~lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~ggteA~~~al~~~~~~~~~~~~~ 144 (420)
T 2pb2_A 67 AVTALGHCHPALVEALKSQGETLWHTSNVFTNEPALRLGRKLIDATF--AERVLFMNSGTEANETAFKLARHYACVRHSP 144 (420)
T ss_dssp HTCTTCBTCHHHHHHHHHHHTTCCCCCTTSCCHHHHHHHHHHHHHSS--CSEEEEESSHHHHHHHHHHHHHHHHHHHTCT
T ss_pred cccccCCCCHHHHHHHHHHHHhcccccCccCCHHHHHHHHHHHhhCC--CCeEEEeCCHHHHHHHHHHHHHHHhhhccCC
Confidence 35789999999999999999876 32334567888999999999984 579999999999999999999987 6
Q ss_pred CCCceEEec
Q psy6206 74 NNDDVITQD 82 (83)
Q Consensus 74 ~r~~ii~~~ 82 (83)
|+.+||+++
T Consensus 145 g~~~vi~~~ 153 (420)
T 2pb2_A 145 FKTKIIAFH 153 (420)
T ss_dssp TCCEEEEET
T ss_pred CCCEEEEEe
Confidence 777888775
No 31
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.53 E-value=3.7e-14 Score=95.91 Aligned_cols=82 Identities=26% Similarity=0.366 Sum_probs=69.1
Q ss_pred CccCCCCCCHHHHHHHHHHHHhhcc-CC-CCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhc-----
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALLNT-NN-RFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHT----- 73 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~~~-~~-~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~----- 73 (83)
|++++||++|+|++++.+++++... .. .++++...+++++|.+.+|.+.++|+|++||+||++.|+|+++.++
T Consensus 60 ~~~~lG~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~ 139 (449)
T 3a8u_X 60 WTCGAGHTRKEIQEAVAKQLSTLDYSPGFQYGHPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAVKMVRAYWRLKGQ 139 (449)
T ss_dssp HTCTTCBSCHHHHHHHHHHTTTCSCCCSSSCCCHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhccCCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCC
Confidence 4678999999999999999987531 12 5667788999999999998777899999999999999999998876
Q ss_pred -CCCceEEec
Q psy6206 74 -NNDDVITQD 82 (83)
Q Consensus 74 -~r~~ii~~~ 82 (83)
++.+||+++
T Consensus 140 ~~~~~vi~~~ 149 (449)
T 3a8u_X 140 ATKTKMIGRA 149 (449)
T ss_dssp TTCCEEEEET
T ss_pred CCCCEEEEEC
Confidence 667888765
No 32
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.49 E-value=2.2e-13 Score=91.51 Aligned_cols=82 Identities=24% Similarity=0.344 Sum_probs=68.1
Q ss_pred CccCCCCCCHHHHHHHHHHHHhhc-c-CCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcC----
Q psy6206 1 MSLPVGHCHPAVVKAACTQLALLN-T-NNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTN---- 74 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~~~-~-~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~---- 74 (83)
|++++||.+|+|++++.++++... . .+.++++...+++++|.+..+.+.++|+|++||+||++.|+++++.+++
T Consensus 53 ~~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~ 132 (429)
T 1s0a_A 53 WAAIHGYNHPQLNAAMKSQIDAMSHVMFGGITHAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGE 132 (429)
T ss_dssp TTCTTCBSCHHHHHHHHHHHHHCSCCCCSSEECHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHTC
T ss_pred hhccCCCCCHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHhcccCC
Confidence 357899999999999999998762 2 2355677788999999999986678999999999999999999887654
Q ss_pred -CCceEEec
Q psy6206 75 -NDDVITQD 82 (83)
Q Consensus 75 -r~~ii~~~ 82 (83)
+.+||.++
T Consensus 133 ~~~~vi~~~ 141 (429)
T 1s0a_A 133 ARQRFLTFR 141 (429)
T ss_dssp CCCEEEEET
T ss_pred CCCeEEEEC
Confidence 66788765
No 33
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.43 E-value=5.4e-13 Score=88.41 Aligned_cols=79 Identities=28% Similarity=0.383 Sum_probs=66.2
Q ss_pred ccCCCCCCHHHHHHHHHHHHhh-ccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh--------
Q psy6206 2 SLPVGHCHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH-------- 72 (83)
Q Consensus 2 ~~~lGh~~p~i~~a~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~-------- 72 (83)
+.++||+||+|.+++.++++.. +....++.+...++++.|.+..+ .++++|++||+||++.|+++++..
T Consensus 47 ~~~lG~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~ 124 (392)
T 3ruy_A 47 AVNQGHRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLTN--KEMVLPMNTGAEAVETAIKTARRWAYDVKKVE 124 (392)
T ss_dssp TCTTCBTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred hhccCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC--CCEEEEeCcHHHHHHHHHHHHHHhhhhccCCC
Confidence 4679999999999999999876 33334567778899999999885 679999999999999999999887
Q ss_pred cCCCceEEec
Q psy6206 73 TNNDDVITQD 82 (83)
Q Consensus 73 ~~r~~ii~~~ 82 (83)
+|+.+||+..
T Consensus 125 ~~~~~vi~~~ 134 (392)
T 3ruy_A 125 ANRAEIIVCE 134 (392)
T ss_dssp TTCCEEEEET
T ss_pred CCCcEEEEEc
Confidence 6677888754
No 34
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.42 E-value=1.3e-12 Score=87.86 Aligned_cols=81 Identities=26% Similarity=0.338 Sum_probs=66.9
Q ss_pred CccCCCCC-CHHHHHHHHHHHHhhc-c-CCCCcchHHHHHHHHHHhhCCCC-CCeEEeeCChHHHHHHHHHHHHhhcCCC
Q psy6206 1 MSLPVGHC-HPAVVKAACTQLALLN-T-NNRFLHDNLVLCARKLASLLPDP-LSVCFFVNSGSEANDLALRLARVHTNND 76 (83)
Q Consensus 1 ~~~~lGh~-~p~i~~a~~~~~~~~~-~-~~~~~~~~~~~la~~l~~~~p~~-~~~v~f~~sGseA~e~Alk~ar~~~~r~ 76 (83)
|++++||+ +|+|++++.++++... . .+.++++...++++.|.+..+.+ .++|+|++||+||++.|+++++.++ +.
T Consensus 52 ~~~~lG~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~ai~~~~~~~-~~ 130 (419)
T 2eo5_A 52 GVNNLGWPSHPEVIKIGIEQMQKLAHAAANDFYNIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIKVVKNTG-RK 130 (419)
T ss_dssp GTTTTCBSCCHHHHHHHHHHHTTSCCCSCSCSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHTTS-CC
T ss_pred hhhccCCCCCHHHHHHHHHHHhhCccccccccCCHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHHHHHHHHHhh-CC
Confidence 35689999 9999999999998762 2 23467777899999999998765 5699999999999999999998877 55
Q ss_pred ceEEec
Q psy6206 77 DVITQD 82 (83)
Q Consensus 77 ~ii~~~ 82 (83)
+||.++
T Consensus 131 ~vi~~~ 136 (419)
T 2eo5_A 131 YIIAFL 136 (419)
T ss_dssp EEEEET
T ss_pred cEEEEC
Confidence 777764
No 35
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.39 E-value=3.3e-12 Score=84.78 Aligned_cols=79 Identities=30% Similarity=0.467 Sum_probs=67.0
Q ss_pred ccCCCCCCHHHHHHHHHHHHhh-ccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh------cC
Q psy6206 2 SLPVGHCHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH------TN 74 (83)
Q Consensus 2 ~~~lGh~~p~i~~a~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~------~~ 74 (83)
+.++||++|++.+++.+++++. +....++.+...++++.|.+..+ .++++|++||+||++.|+++++.+ +|
T Consensus 50 ~~~lg~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~--~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~g 127 (406)
T 4adb_A 50 VNALGHAHPELREALNEQASKFWHTGNGYTNEPVLRLAKKLIDATF--ADRVFFCNSGAEANEAALKLARKFAHDRYGSH 127 (406)
T ss_dssp TCTTCBTCHHHHHHHHHHHTTCSCCCTTSCCHHHHHHHHHHHHHSS--CSEEEEESSHHHHHHHHHHHHHHHHHHHTCTT
T ss_pred hcccCCCCHHHHHHHHHHHHhcccccCCcCCHHHHHHHHHHHhhCC--CCeEEEeCcHHHHHHHHHHHHHHHHHhcCCCC
Confidence 4789999999999999999876 33445667888999999999985 459999999999999999999887 77
Q ss_pred CCceEEec
Q psy6206 75 NDDVITQD 82 (83)
Q Consensus 75 r~~ii~~~ 82 (83)
+.+||..+
T Consensus 128 ~~~vi~~~ 135 (406)
T 4adb_A 128 KSGIVAFK 135 (406)
T ss_dssp CCEEEEET
T ss_pred CcEEEEEC
Confidence 77888754
No 36
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.25 E-value=2.7e-11 Score=80.91 Aligned_cols=81 Identities=27% Similarity=0.368 Sum_probs=65.7
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhcc-C-CCCcchHHHHHHHHHHhhCCCCC-CeEEeeCChHHHHHHHHHHHHhhcCCCce
Q psy6206 2 SLPVGHCHPAVVKAACTQLALLNT-N-NRFLHDNLVLCARKLASLLPDPL-SVCFFVNSGSEANDLALRLARVHTNNDDV 78 (83)
Q Consensus 2 ~~~lGh~~p~i~~a~~~~~~~~~~-~-~~~~~~~~~~la~~l~~~~p~~~-~~v~f~~sGseA~e~Alk~ar~~~~r~~i 78 (83)
++++||.+|++.+++.++++.... . ..++++...+|.+.|.+..|++. ++|+|+++|+||++.+++++|.++++.+|
T Consensus 52 ~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~a~~~~~~~~v 131 (426)
T 1sff_A 52 VLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGT 131 (426)
T ss_dssp TCTTCBTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHTCCEE
T ss_pred hcccCCCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHHHHHhhCCCeE
Confidence 458999999999999999877522 1 23456778899999999986434 78999999999999999999888777678
Q ss_pred EEec
Q psy6206 79 ITQD 82 (83)
Q Consensus 79 i~~~ 82 (83)
|.++
T Consensus 132 i~~~ 135 (426)
T 1sff_A 132 IAFS 135 (426)
T ss_dssp EEET
T ss_pred EEEC
Confidence 7754
No 37
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.25 E-value=6.5e-11 Score=78.61 Aligned_cols=79 Identities=28% Similarity=0.349 Sum_probs=64.5
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhcc-CCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh-----cCC
Q psy6206 2 SLPVGHCHPAVVKAACTQLALLNT-NNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH-----TNN 75 (83)
Q Consensus 2 ~~~lGh~~p~i~~a~~~~~~~~~~-~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~-----~~r 75 (83)
+.++||.+|++.+++.++++.... ...++.+...++++.|.+..+ .++++|++||+||++.|++.++.+ +|+
T Consensus 51 ~~~lg~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~ 128 (397)
T 2ord_A 51 VNVLGHSHPRLVEAIKDQAEKLIHCSNLFWNRPQMELAELLSKNTF--GGKVFFANTGTEANEAAIKIARKYGKKKSEKK 128 (397)
T ss_dssp TCTTCBTCHHHHHHHHHHHHHCSCCCTTSEEHHHHHHHHHHHHTTT--SCEEEEESSHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred ccccCCCCHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHhcC--CCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCC
Confidence 478999999999999999987622 233556778899999999884 579999999999999999988765 566
Q ss_pred CceEEec
Q psy6206 76 DDVITQD 82 (83)
Q Consensus 76 ~~ii~~~ 82 (83)
.+||.++
T Consensus 129 ~~vi~~~ 135 (397)
T 2ord_A 129 YRILSAH 135 (397)
T ss_dssp CEEEEEB
T ss_pred ceEEEEc
Confidence 6787764
No 38
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.18 E-value=1.8e-10 Score=76.36 Aligned_cols=81 Identities=33% Similarity=0.411 Sum_probs=65.8
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhc-cCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 2 SLPVGHCHPAVVKAACTQLALLN-TNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 2 ~~~lGh~~p~i~~a~~~~~~~~~-~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
++++||.+|++.+++.++++... ....++.+...++.+.|.+..+.+.+.++|++||+||++.+++.++.+.++.+||.
T Consensus 56 ~~~~g~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~vi~ 135 (395)
T 1vef_A 56 VANLGHGNPEVVEAVKRQAETLMAMPQTLPTPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHTGRKKFVA 135 (395)
T ss_dssp TCTTCBTCHHHHHHHHHHHHHCCCCCTTSCCHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEE
T ss_pred cccCCCCCHHHHHHHHHHHHhCCCCccccCCHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHHHHhCCCeEEE
Confidence 46789999999999999998753 22335667788999999999865567999999999999999998876666667776
Q ss_pred ec
Q psy6206 81 QD 82 (83)
Q Consensus 81 ~~ 82 (83)
++
T Consensus 136 ~~ 137 (395)
T 1vef_A 136 AM 137 (395)
T ss_dssp ET
T ss_pred Ec
Confidence 54
No 39
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.07 E-value=1.9e-09 Score=70.79 Aligned_cols=79 Identities=28% Similarity=0.301 Sum_probs=62.9
Q ss_pred cCCCCCCHHHHHHHHHHHHhh-ccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhc-----CCC
Q psy6206 3 LPVGHCHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHT-----NND 76 (83)
Q Consensus 3 ~~lGh~~p~i~~a~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~-----~r~ 76 (83)
+++||.+|++.+++.++++.. +....++.+...++.+.|.+..+. .+.++|+++|+||++.+++++|.+. |+.
T Consensus 40 ~~~g~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~l~~~la~~~g~-~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~ 118 (375)
T 2eh6_A 40 NSLGHAYPKLTEALKEQVEKLLHVSNLYENPWQEELAHKLVKHFWT-EGKVFFANSGTESVEAAIKLARKYWRDKGKNKW 118 (375)
T ss_dssp CTTCBSCHHHHHHHHHHHHHCSCCCTTBCCHHHHHHHHHHHHTSSS-CEEEEEESSHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cccCCCCHHHHHHHHHHHHhccccCcccCCHHHHHHHHHHHhhcCC-CCeEEEeCchHHHHHHHHHHHHHHhccCCCCCC
Confidence 578999999999999999875 222345666678899999998743 2789999999999999999877654 656
Q ss_pred ceEEec
Q psy6206 77 DVITQD 82 (83)
Q Consensus 77 ~ii~~~ 82 (83)
+||..+
T Consensus 119 ~vl~~~ 124 (375)
T 2eh6_A 119 KFISFE 124 (375)
T ss_dssp EEEEEB
T ss_pred EEEEEC
Confidence 787654
No 40
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=98.55 E-value=4.7e-07 Score=60.60 Aligned_cols=75 Identities=15% Similarity=-0.052 Sum_probs=54.1
Q ss_pred CCCCCHHHHHHHHHHHHhh-ccCCCCcchHHHHHHHHHHhhCC--CCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 5 VGHCHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLP--DPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 5 lGh~~p~i~~a~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
..+.+|+|++++.++++.. +.+.....+....+++.+.+..+ .+.++|+|+++|+||++.|++.... ...+||+.
T Consensus 72 ~~~~~~~v~~a~~~~~~~~~~~y~~~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~~--~gd~Vi~~ 149 (421)
T 3l8a_A 72 DFLPVPEIKEAIINYGREHIFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSE--KGDAVLIN 149 (421)
T ss_dssp CSCCCHHHHHHHHHHHHHCCSSCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSC--TEEEEEEE
T ss_pred CCCCCHHHHHHHHHHHhcCCcCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhcC--CCCEEEEC
Confidence 3457899999999999874 22223335566778888877654 3456899999999999999998633 22356654
No 41
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=98.51 E-value=7.7e-07 Score=57.63 Aligned_cols=76 Identities=20% Similarity=0.175 Sum_probs=57.2
Q ss_pred cCCCCCCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 3 LPVGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 3 ~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
...|+.+|++.+++.++++.. .......+...++++.+.+..+.+.++++|+++|+||++.+++..+. .| .+|+..
T Consensus 21 ~~~~~~~~~v~~a~~~~~~~~-~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~~~~~~~-~g-d~vl~~ 96 (359)
T 1svv_A 21 DYSVGMHPKILDLMARDNMTQ-HAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIACSLALR-PW-EAVIAT 96 (359)
T ss_dssp SCSSCCCHHHHHHHHHHTTCC-CCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHHHHHHCC-TT-EEEEEE
T ss_pred CCcCCCCHHHHHHHHHHHhhc-cccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHHHHHHhC-CC-CEEEEc
Confidence 456788999999999988642 12233456778899999888766567899999999999999998753 22 356554
No 42
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=98.33 E-value=1.4e-06 Score=56.99 Aligned_cols=79 Identities=13% Similarity=0.087 Sum_probs=57.6
Q ss_pred cCCCCCCHHHHHHHHHHHHhhc-cC-C---CCcc--hHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCC
Q psy6206 3 LPVGHCHPAVVKAACTQLALLN-TN-N---RFLH--DNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNN 75 (83)
Q Consensus 3 ~~lGh~~p~i~~a~~~~~~~~~-~~-~---~~~~--~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r 75 (83)
...|+.+|++.+++.++++... .. . .++. +...++.+.|.+.++.+.+.++|+++|++|++.+++..+ +...
T Consensus 23 ~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~-~~~g 101 (390)
T 1elu_A 23 GGQGILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLD-WHQG 101 (390)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHSC-CCTT
T ss_pred CccCCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCCC-CCCC
Confidence 3468889999999999987652 11 1 2222 456789999999887555689999999999999999875 2333
Q ss_pred CceEEec
Q psy6206 76 DDVITQD 82 (83)
Q Consensus 76 ~~ii~~~ 82 (83)
.+|+...
T Consensus 102 d~vl~~~ 108 (390)
T 1elu_A 102 DEILLTD 108 (390)
T ss_dssp CEEEEET
T ss_pred CEEEEec
Confidence 4666543
No 43
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=98.31 E-value=6.9e-06 Score=53.92 Aligned_cols=79 Identities=10% Similarity=0.064 Sum_probs=57.6
Q ss_pred CCCCCCHHHHHHHHHHHHhhcc-CC--C-----CcchHHHHHHHHHHhhCCC-CCCeEEeeCChHHHHHHHHHHHHh--h
Q psy6206 4 PVGHCHPAVVKAACTQLALLNT-NN--R-----FLHDNLVLCARKLASLLPD-PLSVCFFVNSGSEANDLALRLARV--H 72 (83)
Q Consensus 4 ~lGh~~p~i~~a~~~~~~~~~~-~~--~-----~~~~~~~~la~~l~~~~p~-~~~~v~f~~sGseA~e~Alk~ar~--~ 72 (83)
..|+.+|++.+++.++++.... .. . .+.+...++.+.|.+.++. +.+.++|+++|++|++.+++..+. .
T Consensus 31 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~ 110 (406)
T 1kmj_A 31 ASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNV 110 (406)
T ss_dssp TCCCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHC
T ss_pred ccCCCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHHHhhhhcC
Confidence 3467889999999999987521 11 1 1245567899999999875 457899999999999999998763 3
Q ss_pred cCCCceEEec
Q psy6206 73 TNNDDVITQD 82 (83)
Q Consensus 73 ~~r~~ii~~~ 82 (83)
....+|+...
T Consensus 111 ~~gd~vl~~~ 120 (406)
T 1kmj_A 111 RAGDNIIISQ 120 (406)
T ss_dssp CTTCEEEEET
T ss_pred CCCCEEEEec
Confidence 3344676643
No 44
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=98.28 E-value=1.5e-06 Score=57.16 Aligned_cols=75 Identities=13% Similarity=0.213 Sum_probs=53.2
Q ss_pred cCCCCCCHHHHHHHHHHHHhh-ccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 3 LPVGHCHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 3 ~~lGh~~p~i~~a~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
+.+|+++|.+.+.+.+++.+. ......+.+...++.+.|.+.++. ++++|++||++|++.|++.++.-.|. +||+
T Consensus 5 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~~~sGt~al~~al~~~~~~~gd-~Vi~ 80 (367)
T 3nyt_A 5 IDLKNQQARIKDKIDAGIQRVLRHGQYILGPEVTELEDRLADFVGA--KYCISCANGTDALQIVQMALGVGPGD-EVIT 80 (367)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHCCCSSCHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHTTCCTTC-EEEE
T ss_pred ccccccccccCHHHHHHHHHHHhcCCccCChHHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHhCCCCcC-EEEE
Confidence 457788877777766666553 222223456778899999998854 48999999999999999987543343 4554
No 45
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=98.27 E-value=5.7e-06 Score=53.99 Aligned_cols=65 Identities=25% Similarity=0.112 Sum_probs=49.7
Q ss_pred CCHHHHHHHHHHHHhhc-cCCCCc--chHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh
Q psy6206 8 CHPAVVKAACTQLALLN-TNNRFL--HDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH 72 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~-~~~~~~--~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~ 72 (83)
.+|++.+++.++++... ....++ .+...++.+.+.+..+.+.+.++|+++|++|++.+++.++..
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~ 109 (397)
T 3f9t_A 42 VLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNI 109 (397)
T ss_dssp CCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHH
Confidence 46899999999887642 112222 344567888899988766779999999999999999988765
No 46
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=98.25 E-value=1.1e-05 Score=54.08 Aligned_cols=64 Identities=16% Similarity=0.137 Sum_probs=49.5
Q ss_pred CCC-CCCHHHHHHHHHHHHhhcc-CC--C---CcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 4 PVG-HCHPAVVKAACTQLALLNT-NN--R---FLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 4 ~lG-h~~p~i~~a~~~~~~~~~~-~~--~---~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
++| |.+|++.+++.++++.... .. . ..++...+|.+.|.+..+ .+.+++.+||++|++.+++..
T Consensus 74 ~lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g--~~~~i~~~sGs~a~~~al~~l 144 (427)
T 2w8t_A 74 YMGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYG--TTGAIVFSTGYMANLGIISTL 144 (427)
T ss_dssp TTCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHT--CSEEEEESCHHHHHHHHHHHH
T ss_pred cccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhC--CCceEEecCcHHHHHHHHHHh
Confidence 478 7999999999999987421 11 1 134667889999999884 458899999999999998864
No 47
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=98.20 E-value=1.1e-05 Score=52.79 Aligned_cols=73 Identities=11% Similarity=-0.022 Sum_probs=52.6
Q ss_pred CCCHHHHHHHHHHHHhh-ccCCCCcchHHHHHHHHHHhhCC--CCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 7 HCHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLP--DPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 7 h~~p~i~~a~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
+.+|+|.+++.++++.. +.......+...++++.+.+..+ .+.+.++|+++|+||++.+++.... ...+||+.
T Consensus 45 ~~~~~v~~a~~~~~~~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~--~gd~vl~~ 120 (391)
T 4dq6_A 45 KAAPCIIDSLKNRLEQEIYGYTTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTK--ANDKIMIQ 120 (391)
T ss_dssp CCCHHHHHHHHHHHTTCCCCCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSC--TTCEEEEC
T ss_pred CCCHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhCC--CCCEEEEc
Confidence 45799999999999764 22223345666788888888765 4467899999999999999997632 22356543
No 48
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=98.18 E-value=4.8e-06 Score=54.49 Aligned_cols=70 Identities=17% Similarity=0.121 Sum_probs=50.8
Q ss_pred CCCCCCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 4 PVGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 4 ~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
++| .+|++.+++.++++... .++.+...++.+.|.+..+.+.+.|+|+++|+|+++.+++.. .| .+|++.
T Consensus 35 ~~~-~~~~v~~a~~~~~~~~~---~y~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~al~~~~~~~---~g-d~vl~~ 104 (364)
T 1lc5_A 35 PLG-MPVSVKRALIDNLDCIE---RYPDADYFHLHQALARHHQVPASWILAGNGETESIFTVASGL---KP-RRAMIV 104 (364)
T ss_dssp TTC-CCHHHHHHHHHTGGGGG---SCCCTTCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHH---CC-SEEEEE
T ss_pred CCC-CCHHHHHHHHHHHHHhh---cCCCCCHHHHHHHHHHHHCcCHHHEEECCCHHHHHHHHHHHc---CC-CeEEEe
Confidence 455 67999999999886542 222223456777777776655568999999999999999977 45 567664
No 49
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=98.17 E-value=4.3e-06 Score=54.10 Aligned_cols=65 Identities=18% Similarity=0.253 Sum_probs=48.9
Q ss_pred cCCCCCCHHHHHHHHHHHHhhccCCCC-cchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHH
Q psy6206 3 LPVGHCHPAVVKAACTQLALLNTNNRF-LHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLAR 70 (83)
Q Consensus 3 ~~lGh~~p~i~~a~~~~~~~~~~~~~~-~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar 70 (83)
.+.++.+|++.+++.+++.. +. ..+ ..+...++.+.|.+..+ ....++|+++|++|++.+++.++
T Consensus 15 ~~~~~~~~~v~~a~~~~~~~-~~-~~~~~~~~~~~l~~~la~~~g-~~~~v~~~~~gt~a~~~al~~~~ 80 (356)
T 1v72_A 15 DNIAGASPEVAQALVKHSSG-QA-GPYGTDELTAQVKRKFCEIFE-RDVEVFLVPTGTAANALCLSAMT 80 (356)
T ss_dssp GGGCCCCHHHHHHHHHTTSS-CC-CSTTCSHHHHHHHHHHHHHHT-SCCEEEEESCHHHHHHHHHHTSC
T ss_pred CCccCCCHHHHHHHHhhccC-cc-cccccchHHHHHHHHHHHHhC-CCCcEEEeCCccHHHHHHHHHhc
Confidence 34578899999999987632 11 233 34566889999998886 33458999999999999999764
No 50
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=98.14 E-value=4.3e-06 Score=54.89 Aligned_cols=75 Identities=16% Similarity=0.133 Sum_probs=52.5
Q ss_pred cCCCCCCHHHHHHHHHHHHhh-ccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 3 LPVGHCHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 3 ~~lGh~~p~i~~a~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
.++|+++|.+.+.+.+++.+. ......+.+...++.+.|.+.++. +.++|++||++|++.+++..+.-.|. +||+
T Consensus 6 ~~l~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~i~~~sgt~al~~~l~~l~~~~gd-~Vi~ 81 (373)
T 3frk_A 6 ASFKPMHDEIEYEIKFKFEEIYKRNWFILGDEDKKFEQEFADYCNV--NYCIGCGNGLDALHLILKGYDIGFGD-EVIV 81 (373)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHTCCSSSHHHHHHHHHHHHHHTS--SEEEEESCHHHHHHHHHHHTTCCTTC-EEEE
T ss_pred cCCCcccCCCCHHHHHHHHHHHHCCCccCCchHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHcCCCCcC-EEEE
Confidence 467888877777766666553 222223456778899999998854 58999999999999999976433333 5554
No 51
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=98.14 E-value=1.8e-06 Score=57.35 Aligned_cols=78 Identities=14% Similarity=0.179 Sum_probs=55.0
Q ss_pred CCCCCCHHHHHHHHHHHH--hhc-cCC--C-----CcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHh-h
Q psy6206 4 PVGHCHPAVVKAACTQLA--LLN-TNN--R-----FLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARV-H 72 (83)
Q Consensus 4 ~lGh~~p~i~~a~~~~~~--~~~-~~~--~-----~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~-~ 72 (83)
.-|+.+|++.+++.+++. ... .+. . ...+...++.+.|.+.++.+.+.|+|+++|++|++.+++.... +
T Consensus 30 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~~~a~~~l~~~~ 109 (423)
T 3lvm_A 30 ATTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFY 109 (423)
T ss_dssp TCCCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHHHHH
T ss_pred CcCCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHcCCCCCeEEEeCChHHHHHHHHHHHHHhh
Confidence 346789999999999887 431 111 1 1124457788888888876566999999999999999996553 4
Q ss_pred cC-CCceEEe
Q psy6206 73 TN-NDDVITQ 81 (83)
Q Consensus 73 ~~-r~~ii~~ 81 (83)
.+ ..+|+..
T Consensus 110 ~~~gd~Vl~~ 119 (423)
T 3lvm_A 110 QKKGKHIITS 119 (423)
T ss_dssp TTTCCEEEEE
T ss_pred ccCCCEEEEC
Confidence 43 4566654
No 52
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=98.13 E-value=8.2e-06 Score=53.18 Aligned_cols=78 Identities=15% Similarity=0.140 Sum_probs=55.2
Q ss_pred CCCCCCHHHHHHHHHHHHhhc-cCCC-C-----cchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh--cC
Q psy6206 4 PVGHCHPAVVKAACTQLALLN-TNNR-F-----LHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH--TN 74 (83)
Q Consensus 4 ~lGh~~p~i~~a~~~~~~~~~-~~~~-~-----~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~--~~ 74 (83)
..|+.+|++.+++.++++... .... . ..+...++.+.|.+.++.+.+.++|+++|++|++.+++..+.. ..
T Consensus 9 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~ 88 (384)
T 1eg5_A 9 ATTRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEKR 88 (384)
T ss_dssp TCCCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHHHHTTTT
T ss_pred ccCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhhhhccCC
Confidence 456889999999999987641 1111 1 1234577888888887654568999999999999999987641 23
Q ss_pred CCceEEe
Q psy6206 75 NDDVITQ 81 (83)
Q Consensus 75 r~~ii~~ 81 (83)
..+||..
T Consensus 89 gd~vl~~ 95 (384)
T 1eg5_A 89 KRTIITT 95 (384)
T ss_dssp CCEEEEC
T ss_pred CCEEEEC
Confidence 3456654
No 53
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=98.12 E-value=3e-05 Score=50.66 Aligned_cols=73 Identities=8% Similarity=-0.082 Sum_probs=52.8
Q ss_pred CCCHHHHHHHHHHHHhh-ccCCCCcchHHHHHHHHHHhhCC--CCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 7 HCHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLP--DPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 7 h~~p~i~~a~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
+.+|++.+++.++++.. ..+.....+...++++.+.+..+ .+.+.++|+++|+||++.+++... ....+|+..
T Consensus 37 ~~~~~v~~a~~~~~~~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~l~--~~gd~vl~~ 112 (383)
T 3kax_A 37 EVPQPIQTALKKRIEHPIFGYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFT--KENESVLVQ 112 (383)
T ss_dssp CCCHHHHHHHHHHHHSCCCCCCCCCTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHC--CTTCEEEEC
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhC--CCCCEEEEc
Confidence 46899999999999863 22222245677888888887754 345689999999999999999762 222356553
No 54
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=98.09 E-value=3.1e-05 Score=51.26 Aligned_cols=69 Identities=16% Similarity=-0.058 Sum_probs=52.1
Q ss_pred CCCCCCHHHHHHHHHHHHhhc-cCC---C---CcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh
Q psy6206 4 PVGHCHPAVVKAACTQLALLN-TNN---R---FLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH 72 (83)
Q Consensus 4 ~lGh~~p~i~~a~~~~~~~~~-~~~---~---~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~ 72 (83)
..|+.+|.+.+++.++++... ... . ...+...++.+.|.+.++.+.+.|+|+++|+++++.+++.++.+
T Consensus 36 ~~~~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al~~~~~~ 111 (416)
T 1qz9_A 36 SLGARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLIGARDGEVVVTDTTSINLFKVLSAALRV 111 (416)
T ss_dssp TSCCCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHHHHHHHH
T ss_pred CcCCCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHHHhhccc
Confidence 457888999999999997631 111 0 11355678999999988765678999999999999999987644
No 55
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=98.08 E-value=1.2e-05 Score=53.11 Aligned_cols=77 Identities=16% Similarity=0.146 Sum_probs=55.0
Q ss_pred CCCCCHHHHHHHHHHHHhhcc--C-C--CCc---chHHHHHHHHHHhhCCC-CCCeEEeeCChHHHHHHHHHHHHh--hc
Q psy6206 5 VGHCHPAVVKAACTQLALLNT--N-N--RFL---HDNLVLCARKLASLLPD-PLSVCFFVNSGSEANDLALRLARV--HT 73 (83)
Q Consensus 5 lGh~~p~i~~a~~~~~~~~~~--~-~--~~~---~~~~~~la~~l~~~~p~-~~~~v~f~~sGseA~e~Alk~ar~--~~ 73 (83)
.++.+|++.+++.++++.... . + .+. ++...++.+.|.+.++. +.+.++|+++|++|++.+++..+. ..
T Consensus 37 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~ 116 (420)
T 1t3i_A 37 TSQKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLK 116 (420)
T ss_dssp CCCCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCC
T ss_pred cCCCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHHHhhhcccC
Confidence 356789999999999987421 1 1 121 24457888999998865 457899999999999999998742 33
Q ss_pred CCCceEEe
Q psy6206 74 NNDDVITQ 81 (83)
Q Consensus 74 ~r~~ii~~ 81 (83)
...+|+..
T Consensus 117 ~gd~Vl~~ 124 (420)
T 1t3i_A 117 AGDEIITT 124 (420)
T ss_dssp TTCEEEEE
T ss_pred CCCEEEEC
Confidence 33466654
No 56
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=98.04 E-value=1.6e-05 Score=52.26 Aligned_cols=69 Identities=16% Similarity=0.130 Sum_probs=49.1
Q ss_pred CCHHHHHHHHHHHHhhccCCCCcch-HHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 8 CHPAVVKAACTQLALLNTNNRFLHD-NLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~~~~~~~~~-~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.+|.+.+++.++++.. ..++.. ...++.+.|.+.++.+.+.++|+++|++|++.+++... ....+|+..
T Consensus 39 ~~~~v~~a~~~~~~~~---~~y~~~~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~--~~gd~Vl~~ 108 (381)
T 1v2d_A 39 PPPFLLEAVRRALGRQ---DQYAPPAGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLV--GPGDEVVVL 108 (381)
T ss_dssp CCHHHHHHHHHHTTTS---CSCCCTTCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHC--CTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHh---cCCCCCCCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhC--CCCCEEEEc
Confidence 5789999999988652 223222 24577778887776555689999999999999999763 333456654
No 57
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=98.03 E-value=4.6e-05 Score=49.90 Aligned_cols=74 Identities=12% Similarity=0.057 Sum_probs=51.5
Q ss_pred CCCCHHHHHHHHHHHHhh-ccCCCCcchHHHHHHHHHHhhCC--CCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 6 GHCHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLP--DPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 6 Gh~~p~i~~a~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.+.+|++.+++.++++.. +.......+....+++.+.+..+ .+.+.|+|+++|++|++.+++... ....+|++.
T Consensus 39 ~~~~~~v~~a~~~~~~~~~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~--~~gd~vl~~ 115 (391)
T 3dzz_A 39 FKIAPEIMASMEEKLKVAAFGYESVPAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFT--SPGDQILVQ 115 (391)
T ss_dssp SCCCHHHHHHHHHHHTTCCCCCBCCCHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHS--CTTCEEEEC
T ss_pred CCCCHHHHHHHHHHHhcCcCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhC--CCCCeEEEC
Confidence 347899999999998764 22222234555778888877643 345699999999999999999762 223456653
No 58
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=98.01 E-value=5.7e-06 Score=54.11 Aligned_cols=75 Identities=17% Similarity=0.210 Sum_probs=50.2
Q ss_pred cCCCCCCHHHHHHHHHHHHhh-ccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 3 LPVGHCHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 3 ~~lGh~~p~i~~a~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
+++|+++|.+.. +.+++.+. ......+.+...++.+.|.+.++. +.++|++||++|++.+++..+.-.| .+|+..
T Consensus 9 ~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~a~~~~~~~~~~~~g-d~v~~~ 84 (374)
T 3uwc_A 9 SYLERQFADIEP-YLNDLREFIKTADFTLGAELEKFEKRFAALHNA--PHAIGVGTGTDALAMSFKMLNIGAG-DEVITC 84 (374)
T ss_dssp CCHHHHTSSCHH-HHHHHHHHHHHTCCSSCHHHHHHHHHHHHHTTC--SEEEEESCHHHHHHHHHHHTTCCTT-CEEEEE
T ss_pred eccccCCCCchH-HHHHHHHHHHcCCcccChhHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHcCCCCC-CEEEEC
Confidence 456777766555 55555443 212223456778999999999854 4899999999999999997643333 355543
No 59
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=98.01 E-value=3.9e-05 Score=50.30 Aligned_cols=74 Identities=14% Similarity=0.068 Sum_probs=47.5
Q ss_pred CCCCCHHHHHHHHHHHHhh-ccCCCCcchHHHHHHHHHHhh------CCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCc
Q psy6206 5 VGHCHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASL------LPDPLSVCFFVNSGSEANDLALRLARVHTNNDD 77 (83)
Q Consensus 5 lGh~~p~i~~a~~~~~~~~-~~~~~~~~~~~~~la~~l~~~------~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ 77 (83)
+| .+|++.+++.+++++. .....++.+...++.+.+.+. .+.+.+.|+|+++|+++++.+++.... .| .+
T Consensus 42 ~~-~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l~~-~g-d~ 118 (369)
T 3cq5_A 42 YP-PSEALVADLVATVDKIATELNRYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGG-PG-RT 118 (369)
T ss_dssp SC-CCHHHHHHHHHHHHHHGGGTTSCCCTTCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCS-TT-CE
T ss_pred CC-CCHHHHHHHHHHHHhcccccccCCCccHHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHhcC-CC-CE
Confidence 44 5799999999998763 111223322223555555555 444456899999999999999987532 22 45
Q ss_pred eEEe
Q psy6206 78 VITQ 81 (83)
Q Consensus 78 ii~~ 81 (83)
|+..
T Consensus 119 Vl~~ 122 (369)
T 3cq5_A 119 ALGF 122 (369)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6654
No 60
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=97.98 E-value=3.3e-05 Score=50.47 Aligned_cols=74 Identities=8% Similarity=-0.142 Sum_probs=49.5
Q ss_pred CCHHHHHHHHHHHHhhc-cCC-CCcchHHHHHHHHHHhhCCC--CCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 8 CHPAVVKAACTQLALLN-TNN-RFLHDNLVLCARKLASLLPD--PLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~-~~~-~~~~~~~~~la~~l~~~~p~--~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.+|.+.+++.+++.... ... ....+....+++.+.+..+. +.+.++|+++|+||++.+++....-++..+|+..
T Consensus 37 ~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~ 114 (376)
T 3ezs_A 37 TPKFIQDALKNHTHSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYP 114 (376)
T ss_dssp CCHHHHHHHHTTGGGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEE
T ss_pred CCHHHHHHHHHhhhhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEe
Confidence 47899999998875442 211 12234556677777655442 4579999999999999999976543323466654
No 61
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=97.96 E-value=1.4e-05 Score=51.85 Aligned_cols=59 Identities=14% Similarity=0.050 Sum_probs=45.3
Q ss_pred CCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 8 CHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
.+|++.+++.++++... .++++...++.+.|.+..+.+.+.++|+++|++|++.+++..
T Consensus 40 ~~~~v~~a~~~~~~~~~---~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~ 98 (361)
T 3ftb_A 40 IPKSFLNNIDEGIKNLG---VYPDVNYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF 98 (361)
T ss_dssp SCHHHHTTHHHHHHGGG---SCCCTTCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHhc---CCCCccHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc
Confidence 47999999999988752 223334467777777777655679999999999999999865
No 62
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=97.96 E-value=2.7e-05 Score=50.75 Aligned_cols=67 Identities=15% Similarity=0.120 Sum_probs=50.1
Q ss_pred CCCCCCHHHHHHHHHHHHhhc-cC-CCCc-----chHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHH
Q psy6206 4 PVGHCHPAVVKAACTQLALLN-TN-NRFL-----HDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLAR 70 (83)
Q Consensus 4 ~lGh~~p~i~~a~~~~~~~~~-~~-~~~~-----~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar 70 (83)
..|+.+|+|.+++.++++... .. ..+. .+...++.+.+.+.++.+.+.++|+++|++|++.+++...
T Consensus 8 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~ 81 (382)
T 4eb5_A 8 SAKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYA 81 (382)
T ss_dssp TCCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHH
Confidence 346789999999999987642 11 1122 2345778888888876545689999999999999999776
No 63
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=97.91 E-value=0.00012 Score=48.27 Aligned_cols=65 Identities=23% Similarity=0.213 Sum_probs=49.1
Q ss_pred cCCCC-CCHHHHHHHHHHHHhhccC---CCCc---chHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 3 LPVGH-CHPAVVKAACTQLALLNTN---NRFL---HDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 3 ~~lGh-~~p~i~~a~~~~~~~~~~~---~~~~---~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
.++|| .+|++.+++.++++..... ..++ .+...++.+.|.+.++. +..++.+||++|++.+++..
T Consensus 54 ~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~--~~~i~~~sGs~a~~~~~~~~ 125 (401)
T 1fc4_A 54 NYLGLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLGM--EDAILYSSCFDANGGLFETL 125 (401)
T ss_dssp CTTSCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHTTHHHH
T ss_pred CcccccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhCC--CcEEEeCChHHHHHHHHHHH
Confidence 46886 8999999999998774211 1121 46678899999998854 36778899999999988864
No 64
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=97.91 E-value=0.00016 Score=47.37 Aligned_cols=63 Identities=19% Similarity=0.196 Sum_probs=48.6
Q ss_pred CC-CCCHHHHHHHHHHHHhhcc---CCCC---cchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 5 VG-HCHPAVVKAACTQLALLNT---NNRF---LHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 5 lG-h~~p~i~~a~~~~~~~~~~---~~~~---~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
+| +.+|++.+++.++++.... .+.+ .++...++.+.|.+.++ .+.+++.+||++|++.+++..
T Consensus 50 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--~~~~i~~~sGt~a~~~~~~~~ 119 (384)
T 1bs0_A 50 LGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLG--YSRALLFISGFAANQAVIAAM 119 (384)
T ss_dssp TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT--CSEEEEESCHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhC--CCcEEEeCCcHHHHHHHHHHh
Confidence 68 6899999999999977421 1122 34677889999999884 357899999999999999864
No 65
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=97.90 E-value=0.00013 Score=47.88 Aligned_cols=65 Identities=20% Similarity=0.178 Sum_probs=48.9
Q ss_pred cCCC-CCCHHHHHHHHHHHHhhcc---CCCC---cchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 3 LPVG-HCHPAVVKAACTQLALLNT---NNRF---LHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 3 ~~lG-h~~p~i~~a~~~~~~~~~~---~~~~---~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
.++| |.+|++.+++.+++++... ...+ ..+...++.+.+.+..+. +..++.+||++|++.+++..
T Consensus 52 ~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~--~~~i~~~sGt~a~~~~l~~~ 123 (399)
T 3tqx_A 52 NYLGLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLGT--DDTILYSSCFDANGGLFETL 123 (399)
T ss_dssp CTTSCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHTTHHHH
T ss_pred CcccccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHCC--CcEEEECchHHHHHHHHHHh
Confidence 4578 7999999999999987521 1111 345678899999988853 46777889999999998754
No 66
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=97.89 E-value=2.3e-05 Score=52.82 Aligned_cols=63 Identities=10% Similarity=0.047 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHHhhccCCCC-cchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh---cCCC
Q psy6206 10 PAVVKAACTQLALLNTNNRF-LHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH---TNND 76 (83)
Q Consensus 10 p~i~~a~~~~~~~~~~~~~~-~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~---~~r~ 76 (83)
|.|.+++.+++..... .+ .++...+|.+.|.+.++ .++++|++||+||++.|++.++.+ +|+.
T Consensus 55 ~~v~~a~~~~~~~~~~--~y~~~~~~~~l~~~la~~~~--~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~ 121 (467)
T 1ax4_A 55 NAMSDHQWAAMITGDE--AYAGSRNYYDLKDKAKELFN--YDYIIPAHQGRGAENILFPVLLKYKQKEGKA 121 (467)
T ss_dssp CCEEHHHHHHHHTCCC--CSSSCHHHHHHHHHHHHHHC--CCEEEEESSHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhhccc--ccccCccHHHHHHHHHHHcC--CCcEEEcCCcHHHHHHHHHHHHHhhccCCCc
Confidence 5677777776654321 23 34556788999998885 469999999999999999998875 6765
No 67
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=97.89 E-value=6e-05 Score=50.04 Aligned_cols=63 Identities=17% Similarity=0.170 Sum_probs=45.1
Q ss_pred CCC-CCHHHHHHHHHHHHhhcc---CC---CCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 5 VGH-CHPAVVKAACTQLALLNT---NN---RFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 5 lGh-~~p~i~~a~~~~~~~~~~---~~---~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
+|+ .||+|.+++.+++++... .. ....+...++++.|.+..+ .+.+++.+||++|++.+++..
T Consensus 70 l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--~~~~i~~~sGt~a~~~~l~~~ 139 (409)
T 3kki_A 70 LALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTG--FDECLLSQSGWNANVGLLQTI 139 (409)
T ss_dssp TCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHT--CSEEEEESCHHHHHHHHHHHH
T ss_pred cCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhC--CCeEEEecchHHHHHHHHHHh
Confidence 555 589999999999987411 01 1122445678888888874 456788899999999999854
No 68
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=97.88 E-value=8.1e-05 Score=48.23 Aligned_cols=59 Identities=19% Similarity=0.212 Sum_probs=48.2
Q ss_pred CCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 8 CHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
.+|++.+++.++++.. ..++.+...++.+.+.+..+.+.+.++|+++|++|++.+++..
T Consensus 30 ~~~~v~~a~~~~~~~~---~~y~~~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l 88 (354)
T 3ly1_A 30 MSPKAQAAARDAVVKA---NRYAKNEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAY 88 (354)
T ss_dssp CCHHHHHHHHHTGGGT---TSCCHHHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhC---cCCCCCchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHH
Confidence 5799999999887753 3455566688999999988755679999999999999999965
No 69
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=97.88 E-value=6.3e-05 Score=49.46 Aligned_cols=75 Identities=19% Similarity=0.048 Sum_probs=46.9
Q ss_pred CCCHHHHHHHHHHHHhhccCCCC-cchHHHHHHHHHHhhCCC------CCCeEEe--eCChHHHHHHHHHHHHhhcCCCc
Q psy6206 7 HCHPAVVKAACTQLALLNTNNRF-LHDNLVLCARKLASLLPD------PLSVCFF--VNSGSEANDLALRLARVHTNNDD 77 (83)
Q Consensus 7 h~~p~i~~a~~~~~~~~~~~~~~-~~~~~~~la~~l~~~~p~------~~~~v~f--~~sGseA~e~Alk~ar~~~~r~~ 77 (83)
+.+|.+.+++.++++.... ..+ +.....++.+.+.+.... +.++|+| +++|++|++.++++.+.+....+
T Consensus 44 ~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~ 122 (396)
T 2q7w_A 44 PVLTSVKKAEQYLLENETT-KNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKR 122 (396)
T ss_dssp CCCHHHHHHHHHHHHHCCC-CCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCE
T ss_pred cCcHHHHHHHHhhcCcccc-cCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCE
Confidence 3459999999988765311 112 222223444444444311 1458888 99999999999998776554456
Q ss_pred eEEec
Q psy6206 78 VITQD 82 (83)
Q Consensus 78 ii~~~ 82 (83)
|+..+
T Consensus 123 Vl~~~ 127 (396)
T 2q7w_A 123 VWVSN 127 (396)
T ss_dssp EEEEE
T ss_pred EEEcC
Confidence 76643
No 70
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=97.87 E-value=2.1e-05 Score=52.13 Aligned_cols=73 Identities=14% Similarity=-0.030 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHhhccCCCC-cchHHHHHHHHHHhhCCC------CCCeEEe--eCChHHHHHHHHHHHHhhcCC-----
Q psy6206 10 PAVVKAACTQLALLNTNNRF-LHDNLVLCARKLASLLPD------PLSVCFF--VNSGSEANDLALRLARVHTNN----- 75 (83)
Q Consensus 10 p~i~~a~~~~~~~~~~~~~~-~~~~~~~la~~l~~~~p~------~~~~v~f--~~sGseA~e~Alk~ar~~~~r----- 75 (83)
|.+.+++.++++.......+ +.....++.+.+.+..+. ..++|+| +++|++|++.++++.+.+...
T Consensus 51 ~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~ 130 (412)
T 1ajs_A 51 PVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKD 130 (412)
T ss_dssp HHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCC
T ss_pred HHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCC
Confidence 78999998877321011122 222224455555554421 2468999 999999999999987765433
Q ss_pred CceEEec
Q psy6206 76 DDVITQD 82 (83)
Q Consensus 76 ~~ii~~~ 82 (83)
.+|+...
T Consensus 131 d~Vl~~~ 137 (412)
T 1ajs_A 131 TPVYVSS 137 (412)
T ss_dssp SCEEEEE
T ss_pred CeEEEcC
Confidence 5677653
No 71
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=97.87 E-value=4.1e-05 Score=49.81 Aligned_cols=74 Identities=12% Similarity=-0.005 Sum_probs=49.3
Q ss_pred CCCCCCHHHHHHHHHHHHhhc--------cCCCCcchHHHHHHHH-HHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcC
Q psy6206 4 PVGHCHPAVVKAACTQLALLN--------TNNRFLHDNLVLCARK-LASLLPDPLSVCFFVNSGSEANDLALRLARVHTN 74 (83)
Q Consensus 4 ~lGh~~p~i~~a~~~~~~~~~--------~~~~~~~~~~~~la~~-l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~ 74 (83)
+.|+.+|++.+++.++++... .....+.+...++.+. +.+.++.+ .++|+++|++|++.+++... ..
T Consensus 17 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~~~--~v~~~~g~t~a~~~~~~~~~--~~ 92 (371)
T 2e7j_A 17 TGGKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLGCD--VARVTNGAREAKFAVMHSLA--KK 92 (371)
T ss_dssp HTCCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTTSS--EEEEESSHHHHHHHHHHHHC--CT
T ss_pred cCCCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcCCC--EEEEeCChHHHHHHHHHHHh--CC
Confidence 356778999999999886541 1112234556788899 99988654 99999999999999999773 23
Q ss_pred CCceEEe
Q psy6206 75 NDDVITQ 81 (83)
Q Consensus 75 r~~ii~~ 81 (83)
..+|+..
T Consensus 93 gd~vl~~ 99 (371)
T 2e7j_A 93 DAWVVMD 99 (371)
T ss_dssp TCEEEEE
T ss_pred CCEEEEc
Confidence 3456654
No 72
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=97.87 E-value=1e-05 Score=53.40 Aligned_cols=74 Identities=16% Similarity=0.097 Sum_probs=47.6
Q ss_pred cCCCCCCHH----HHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCce
Q psy6206 3 LPVGHCHPA----VVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDV 78 (83)
Q Consensus 3 ~~lGh~~p~----i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~i 78 (83)
.++++++|. +.+++.+.+..... ..+.+...++.+.|.+.++. +.++|++||++|++.+++..+.-.| .+|
T Consensus 25 ~~l~~~~p~~~~~~~~a~~~~~~~~~~--~~~~~~~~~l~~~la~~~~~--~~~i~~~~gt~al~~~l~~~~~~~g-d~v 99 (391)
T 3dr4_A 25 PRISVAAPRLDGNERDYVLECMDTTWI--SSVGRFIVEFEKAFADYCGV--KHAIACNNGTTALHLALVAMGIGPG-DEV 99 (391)
T ss_dssp ---CCCCCCCCSSHHHHHHHHHHHTCC--SSCSHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHTCCTT-CEE
T ss_pred ceeccCCCCCCHHHHHHHHHHHHcCCc--cCCChHHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHcCCCCc-CEE
Confidence 456777654 45555555443211 12456778899999998854 4899999999999999997743333 355
Q ss_pred EEe
Q psy6206 79 ITQ 81 (83)
Q Consensus 79 i~~ 81 (83)
+..
T Consensus 100 l~~ 102 (391)
T 3dr4_A 100 IVP 102 (391)
T ss_dssp EEE
T ss_pred EEC
Confidence 543
No 73
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=97.87 E-value=4.1e-05 Score=49.95 Aligned_cols=72 Identities=15% Similarity=0.036 Sum_probs=48.3
Q ss_pred CCHHHHHHHHHHHHhh-ccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 8 CHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.+|+|.+++.++++.. .....++.+...++.+.|.+..+.+.+.++|+++|++|++.+++.... .| .+|+..
T Consensus 40 ~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~lr~~la~~~g~~~~~i~~t~g~~~al~~~~~~l~~-~g-d~Vl~~ 112 (360)
T 3hdo_A 40 PSPEVVKAILEELGPDGAALRIYPSASSQKLREVAGELYGFDPSWIIMANGSDEVLNNLIRAFAA-EG-EEIGYV 112 (360)
T ss_dssp CCHHHHHHHHHHHTTTCGGGGSCCCSSCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCC-TT-CEEEEE
T ss_pred CCHHHHHHHHHHHhcccchhhcCCCCchHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHHhC-CC-CEEEEc
Confidence 4799999999998763 111223322235677777776654457999999999999999986522 23 355543
No 74
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=97.85 E-value=0.00024 Score=46.42 Aligned_cols=75 Identities=12% Similarity=-0.041 Sum_probs=48.8
Q ss_pred CCCCCCHHHHHHHHHHHHhh-ccCC--CCcchHHHHHHHHHHhhC--CCCCCeEEeeCChHHHHHHHHHHHHhhcCCCce
Q psy6206 4 PVGHCHPAVVKAACTQLALL-NTNN--RFLHDNLVLCARKLASLL--PDPLSVCFFVNSGSEANDLALRLARVHTNNDDV 78 (83)
Q Consensus 4 ~lGh~~p~i~~a~~~~~~~~-~~~~--~~~~~~~~~la~~l~~~~--p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~i 78 (83)
.+|+ +|.+.+++.++++.. ..+. ....+....+++.+.... +.+.+.++++++|++|++.+++.... .| .+|
T Consensus 40 ~~~~-~~~v~~a~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~-~g-d~v 116 (370)
T 2z61_A 40 DFNT-PKPIVDEGIKSLKEGKTHYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIID-DG-DEV 116 (370)
T ss_dssp SSCC-CHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCC-TT-CEE
T ss_pred CCCC-CHHHHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcC-CC-CEE
Confidence 4566 789999999998763 1111 112344556666665432 23356899999999999999997621 23 456
Q ss_pred EEe
Q psy6206 79 ITQ 81 (83)
Q Consensus 79 i~~ 81 (83)
+..
T Consensus 117 l~~ 119 (370)
T 2z61_A 117 LIQ 119 (370)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 75
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=97.85 E-value=1.9e-05 Score=51.91 Aligned_cols=73 Identities=14% Similarity=0.080 Sum_probs=50.9
Q ss_pred CCCCCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCC-eEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLS-VCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 5 lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~-~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
-++.+|++.+++.+++.. +. +....+...++++.+.+..+.+.+ .++|+++|++|++.+++... ....+|+..
T Consensus 42 ~~~~~~~v~~a~~~~~~~-~~-~~~~~~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~--~~gd~Vl~~ 115 (393)
T 1vjo_A 42 PSNAHPSVLQAMNVSPVG-HL-DPAFLALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAV--EPGDVVLIG 115 (393)
T ss_dssp CCCCCHHHHHHHSSCCCC-TT-SHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHC--CTTCEEEEE
T ss_pred CCCCCHHHHHHHhccccc-cc-CHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhcc--CCCCEEEEE
Confidence 456789999888776543 11 111234567788888888765556 89999999999999999773 233456654
No 76
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=97.83 E-value=9.5e-05 Score=49.47 Aligned_cols=74 Identities=15% Similarity=0.016 Sum_probs=51.2
Q ss_pred cCCCCCCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 3 LPVGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 3 ~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
..++|.+|+.++++.+ ....+..+...++...++.+.+.+..+. +.++|++||+||++.+++.. .....+||+.
T Consensus 28 ~~~~~~~~~~~~~~~~-~~~~~~y~~~~~~~~~~l~~~la~~~g~--~~~~~~~~gt~a~~~al~~l--~~~gd~vi~~ 101 (412)
T 2cb1_A 28 AAYGFKTLEEGQERFA-TGEGYVYARQKDPTAKALEERLKALEGA--LEAVVLASGQAATFAALLAL--LRPGDEVVAA 101 (412)
T ss_dssp SBCCCSSHHHHHHHHH-HCCSCSBTTTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHTT--CCTTCEEEEE
T ss_pred ceeecCChHHHHHHhc-cccCcCcCCCCChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHH--hCCCCEEEEe
Confidence 4678888887665544 1112333344557778899999998854 48999999999999999965 2333466654
No 77
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=97.82 E-value=0.00015 Score=47.78 Aligned_cols=63 Identities=21% Similarity=0.154 Sum_probs=48.9
Q ss_pred CCC-CCHHHHHHHHHHHHhhcc-CC-----CCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 5 VGH-CHPAVVKAACTQLALLNT-NN-----RFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 5 lGh-~~p~i~~a~~~~~~~~~~-~~-----~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
+|| .+|++.+++.++++.... .. ....+...++++.+.+..+ .+.++++++|+||++.+++..
T Consensus 54 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g--~~~v~~~~ggt~a~~~~~~~~ 123 (398)
T 3a2b_A 54 LGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVG--KEAAILFSTGFQSNLGPLSCL 123 (398)
T ss_dssp TCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHS
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhC--CCcEEEECCHHHHHHHHHHHH
Confidence 588 789999999999876421 11 1134667889999988875 358999999999999999875
No 78
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=97.82 E-value=0.00013 Score=48.04 Aligned_cols=76 Identities=11% Similarity=-0.042 Sum_probs=53.3
Q ss_pred CCCCHHHHHHHHHHHHhhc-c-CCCCc-----chHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHH-HhhcCCCc
Q psy6206 6 GHCHPAVVKAACTQLALLN-T-NNRFL-----HDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLA-RVHTNNDD 77 (83)
Q Consensus 6 Gh~~p~i~~a~~~~~~~~~-~-~~~~~-----~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~a-r~~~~r~~ 77 (83)
++.+|++.+++.++++... . .+.+. .+...++.+.+.+.++.+.+.++|+++|+++++.+++.. +.+....+
T Consensus 36 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~~l~~~~~~gd~ 115 (406)
T 3cai_A 36 MLIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAEASSSRAGLGYE 115 (406)
T ss_dssp CCCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHTGGGGBTTCE
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHHHHhhccCCCCE
Confidence 3668999999999998642 1 12232 345677888888887654568999999999999998843 33443446
Q ss_pred eEEe
Q psy6206 78 VITQ 81 (83)
Q Consensus 78 ii~~ 81 (83)
||+.
T Consensus 116 vi~~ 119 (406)
T 3cai_A 116 VIVS 119 (406)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 6654
No 79
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=97.81 E-value=3e-05 Score=50.50 Aligned_cols=69 Identities=9% Similarity=0.028 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 8 CHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.+|++.+++.++++.. ..++.+...++.+.+.+..+.+.+.++|+++|+||++.+++.. .....+|+..
T Consensus 46 ~~~~v~~a~~~~~~~~---~~y~~~~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~~~--~~~gd~vl~~ 114 (363)
T 3ffh_A 46 TSKKVAAIQANSSVET---EIYPDGWASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVL--LDTTTNTVMA 114 (363)
T ss_dssp CCHHHHHHHHTCBSCC---CBC----CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHH--CSTTCEEEEE
T ss_pred CCHHHHHHHHHHHHHh---hcCCCcchHHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHHHH--ccCCCEEEEc
Confidence 4688999988866543 2334444467777887777655679999999999999999865 2223355543
No 80
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=97.81 E-value=9e-05 Score=48.28 Aligned_cols=59 Identities=8% Similarity=0.077 Sum_probs=43.4
Q ss_pred CCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 8 CHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
.+|++.+++.++++... .++.+...++.+.|.+..+.+.+.++|+++|++|++.+++..
T Consensus 44 ~~~~v~~a~~~~~~~~~---~y~~~~~~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~~l 102 (365)
T 3get_A 44 TPPKAIECLRQNANKAH---LYPDDSMIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIHSK 102 (365)
T ss_dssp SCHHHHHHHHHHGGGTT---SCCCTTCHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhc---cCCCCChHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHH
Confidence 47899999999887542 222222246777777776545679999999999999999865
No 81
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=97.81 E-value=0.00017 Score=48.03 Aligned_cols=75 Identities=12% Similarity=-0.046 Sum_probs=48.3
Q ss_pred CCCCCCHHHHHHHHHHHHhh----ccCCC--CcchHHHHHHHHHHhhCC--CCCC-eEEeeCChHHHHHHHHHHHHhhcC
Q psy6206 4 PVGHCHPAVVKAACTQLALL----NTNNR--FLHDNLVLCARKLASLLP--DPLS-VCFFVNSGSEANDLALRLARVHTN 74 (83)
Q Consensus 4 ~lGh~~p~i~~a~~~~~~~~----~~~~~--~~~~~~~~la~~l~~~~p--~~~~-~v~f~~sGseA~e~Alk~ar~~~~ 74 (83)
.+| .+|.+.+++.++++.. ..+.. ...+....+++.+.+..+ .+.+ .|+|+++|+||++.+++.... .|
T Consensus 48 ~~~-~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~-~g 125 (429)
T 1yiz_A 48 DYH-APKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVD-EG 125 (429)
T ss_dssp SSC-CCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCC-TT
T ss_pred CCC-CCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcC-CC
Confidence 345 5799999999998762 11111 122344556666654333 3456 899999999999999997632 23
Q ss_pred CCceEEe
Q psy6206 75 NDDVITQ 81 (83)
Q Consensus 75 r~~ii~~ 81 (83)
.+|++.
T Consensus 126 -d~Vl~~ 131 (429)
T 1yiz_A 126 -DEVIII 131 (429)
T ss_dssp -CEEEEE
T ss_pred -CEEEEc
Confidence 456654
No 82
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=97.80 E-value=0.00022 Score=46.89 Aligned_cols=75 Identities=15% Similarity=0.052 Sum_probs=49.1
Q ss_pred CCCCCCHHHHHHHHHHHHhh-ccCCCCcch-HHHHHHHHHHhhCC--CCCCeEEeeCChHHHHHHHHHHHHhhcCCCceE
Q psy6206 4 PVGHCHPAVVKAACTQLALL-NTNNRFLHD-NLVLCARKLASLLP--DPLSVCFFVNSGSEANDLALRLARVHTNNDDVI 79 (83)
Q Consensus 4 ~lGh~~p~i~~a~~~~~~~~-~~~~~~~~~-~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii 79 (83)
.+| .+|+|.+++.++++.. ..+.....+ ....+++.+.+..+ .+.+.|+|+++|+||++.+++.... .| .+|+
T Consensus 39 ~~~-~~~~v~~a~~~~~~~~~~~y~~~~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~-~g-d~vl 115 (390)
T 1d2f_A 39 DFA-TAPCIIEALNQRLMHGVFGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSE-TG-EGVV 115 (390)
T ss_dssp SSC-CCHHHHHHHHHHHTTCCCCCCCSCCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSC-TT-CEEE
T ss_pred CCC-CCHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHhcC-CC-CEEE
Confidence 345 5799999999998653 111111334 55667776665443 3456899999999999999996532 22 4566
Q ss_pred Ee
Q psy6206 80 TQ 81 (83)
Q Consensus 80 ~~ 81 (83)
+.
T Consensus 116 ~~ 117 (390)
T 1d2f_A 116 IH 117 (390)
T ss_dssp EE
T ss_pred Ec
Confidence 54
No 83
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=97.80 E-value=3.7e-05 Score=50.56 Aligned_cols=66 Identities=14% Similarity=0.057 Sum_probs=49.1
Q ss_pred CCCCCHHHHHHHHHHHHhhc-cCC------CCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHH
Q psy6206 5 VGHCHPAVVKAACTQLALLN-TNN------RFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLAR 70 (83)
Q Consensus 5 lGh~~p~i~~a~~~~~~~~~-~~~------~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar 70 (83)
.+..+|++.+++.++++... ... ....+...++.+.|.+..+.+.+.++|+++|++|++.+++...
T Consensus 29 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~~~~l~ 101 (400)
T 3vax_A 29 TTRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTVSAEPDELIFTSGATESNNIALLGLA 101 (400)
T ss_dssp CSSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHHHHTTH
T ss_pred CCCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHHHHHHH
Confidence 34568999999999987641 111 1123445778888888887655689999999999999999765
No 84
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=97.80 E-value=0.00019 Score=47.14 Aligned_cols=74 Identities=14% Similarity=-0.014 Sum_probs=50.2
Q ss_pred CCHHHHHHHHHHHHhhc-cCC-CCcchHHHHHHHHHHhhCC---CCCC-eEEeeCChHHHHHHHHHHHHhhcC---CCce
Q psy6206 8 CHPAVVKAACTQLALLN-TNN-RFLHDNLVLCARKLASLLP---DPLS-VCFFVNSGSEANDLALRLARVHTN---NDDV 78 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~-~~~-~~~~~~~~~la~~l~~~~p---~~~~-~v~f~~sGseA~e~Alk~ar~~~~---r~~i 78 (83)
.+|.+.+++.++++... ... ....+....+++.+.+..+ .+.+ .++|+++|++|++.+++......+ +.+|
T Consensus 44 ~~~~v~~a~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~v 123 (396)
T 3jtx_A 44 TPKVITDALTASLHELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAI 123 (396)
T ss_dssp CCHHHHHHHHHTGGGGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEE
T ss_pred CCHHHHHHHHHHhhhccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEE
Confidence 47899999999886542 222 1234556777777776543 2356 899999999999999997754322 2467
Q ss_pred EEe
Q psy6206 79 ITQ 81 (83)
Q Consensus 79 i~~ 81 (83)
++.
T Consensus 124 l~~ 126 (396)
T 3jtx_A 124 VSP 126 (396)
T ss_dssp EEE
T ss_pred EEc
Confidence 654
No 85
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=97.79 E-value=9.4e-05 Score=48.13 Aligned_cols=70 Identities=17% Similarity=0.070 Sum_probs=51.1
Q ss_pred CCCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHh-hcCCCceEEe
Q psy6206 7 HCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARV-HTNNDDVITQ 81 (83)
Q Consensus 7 h~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~-~~~r~~ii~~ 81 (83)
.-+|++.+++.++++... ..+.+...++.+.|.+.++. +.++|++||++|++.+++..+. .....+|+..
T Consensus 10 ~~~~~v~~a~~~~~~~~~---~~~~~~~~~l~~~la~~~~~--~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~ 80 (375)
T 2fnu_A 10 CLDKEDKKAVLEVLNSKQ---LTQGKRSLLFEEALCEFLGV--KHALVFNSATSALLTLYRNFSEFSADRNEIITT 80 (375)
T ss_dssp CCCHHHHHHHHHHHTSSC---CSSSHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHSSCCCTTSCEEEEC
T ss_pred CCCHHHHHHHHHHHHcCc---ccCChHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHhcccCCCCCEEEEC
Confidence 357999999999886532 12345677889999988854 4899999999999999998752 2222356654
No 86
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=97.78 E-value=0.00012 Score=47.78 Aligned_cols=61 Identities=16% Similarity=0.097 Sum_probs=45.6
Q ss_pred CCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCC-CCCeEEeeCChHHHHHHHHHHH
Q psy6206 8 CHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPD-PLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~-~~~~v~f~~sGseA~e~Alk~a 69 (83)
.+|++.+++.++++... ...++.+...++.+.|.+..+. +.+.++|+++|+||++.+++..
T Consensus 44 ~~~~v~~a~~~~~~~~~-~~~y~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~ 105 (367)
T 3euc_A 44 LPPALRSELAARLGEVA-LNRYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAA 105 (367)
T ss_dssp CCHHHHHHHHHHHHHHH-TTCSCCCCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHhhhhh-hhcCCCCcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHHHHH
Confidence 57999999999987531 1233333456777778777654 4579999999999999999865
No 87
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=97.77 E-value=1.2e-05 Score=54.15 Aligned_cols=59 Identities=8% Similarity=0.084 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHhhccCCCC-cchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh
Q psy6206 10 PAVVKAACTQLALLNTNNRF-LHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH 72 (83)
Q Consensus 10 p~i~~a~~~~~~~~~~~~~~-~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~ 72 (83)
|+|.+++.++++... ..+ .++...+|.+.|++.++ .++++|++||+||++.|++.++..
T Consensus 53 ~~v~~a~~~~l~~~~--~~y~~~~~~~~l~~~la~~~~--~~~v~~t~~gt~A~~~al~~~~~~ 112 (467)
T 2oqx_A 53 GAVTQSMQAAMMRGD--EAYSGSRSYYALAESVKNIFG--YQYTIPTHQGRGAEQIYIPVLIKK 112 (467)
T ss_dssp SCCCHHHHHHTTSCC--CCSSSCHHHHHHHHHHHHHHC--CSEEEEEC--CCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCc--ceeccCchhHHHHHHHHHHhC--cCcEEEcCCcHHHHHHHHHHHhcc
Confidence 778888877765421 123 24556789999999884 479999999999999999998876
No 88
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=97.77 E-value=0.00016 Score=47.77 Aligned_cols=74 Identities=18% Similarity=-0.055 Sum_probs=48.4
Q ss_pred CCCCCHHHHHHHHHHHHhhc-cCCCCc-----chHHHHHHHHHHhhCC--CCCCeEEeeCChHHHHHHHHHHHHhhcCCC
Q psy6206 5 VGHCHPAVVKAACTQLALLN-TNNRFL-----HDNLVLCARKLASLLP--DPLSVCFFVNSGSEANDLALRLARVHTNND 76 (83)
Q Consensus 5 lGh~~p~i~~a~~~~~~~~~-~~~~~~-----~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~Alk~ar~~~~r~ 76 (83)
.||.+|.+.+++.++++... ... +. .+....+++.+.+..+ .+.+.|+|+++|++|++.+++.... .| .
T Consensus 47 ~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~-~g-d 123 (407)
T 2zc0_A 47 ELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLID-PG-D 123 (407)
T ss_dssp TTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCC-TT-C
T ss_pred hhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcC-CC-C
Confidence 46778999999999987642 111 22 2334455555544333 3456899999999999999998742 23 3
Q ss_pred ceEEe
Q psy6206 77 DVITQ 81 (83)
Q Consensus 77 ~ii~~ 81 (83)
+|+..
T Consensus 124 ~vl~~ 128 (407)
T 2zc0_A 124 VVITE 128 (407)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 56654
No 89
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=97.76 E-value=5.1e-05 Score=49.95 Aligned_cols=74 Identities=18% Similarity=-0.037 Sum_probs=46.3
Q ss_pred CCCHHHHHHHHHHHHhh--ccC-C-CCcchHHHHHHHHHHhhCCCCCCeEEe--eCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 7 HCHPAVVKAACTQLALL--NTN-N-RFLHDNLVLCARKLASLLPDPLSVCFF--VNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 7 h~~p~i~~a~~~~~~~~--~~~-~-~~~~~~~~~la~~l~~~~p~~~~~v~f--~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
+.+|.+.+++.++++.. +.+ . ....+....+++.+..... ..++|+| +++|++|++.++++.+.+....+|+.
T Consensus 44 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~-~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~ 122 (394)
T 2ay1_A 44 PIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGELILGDGL-KSETTATLATVGGTGALRQALELARMANPDLRVFV 122 (394)
T ss_dssp CCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHHHHHGGGC-CGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred cCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHHHHhCCCC-CcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEE
Confidence 44699999999887652 111 1 1112333445544432211 3468999 99999999999998876544445665
Q ss_pred e
Q psy6206 81 Q 81 (83)
Q Consensus 81 ~ 81 (83)
.
T Consensus 123 ~ 123 (394)
T 2ay1_A 123 S 123 (394)
T ss_dssp E
T ss_pred c
Confidence 4
No 90
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=97.76 E-value=4.5e-05 Score=50.38 Aligned_cols=75 Identities=11% Similarity=0.003 Sum_probs=48.6
Q ss_pred CCCCCHHHHHHHHHHHHhhc-cCCCCcc-hHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 5 VGHCHPAVVKAACTQLALLN-TNNRFLH-DNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 5 lGh~~p~i~~a~~~~~~~~~-~~~~~~~-~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.||.+|.+.+++.++++... ....+.. ....++.+.+.+..+.+.+.|+++++|++|++.+++.... .| .+|+..
T Consensus 45 ~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~~~-~g-d~Vl~~ 121 (397)
T 2zyj_A 45 ELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLD-EG-SPVLLE 121 (397)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCC-TT-CEEEEE
T ss_pred hhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHhCC-CC-CEEEEe
Confidence 46778999999999887631 1122222 1234566666665543346899999999999999997532 23 356654
No 91
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=97.73 E-value=0.00033 Score=46.10 Aligned_cols=72 Identities=11% Similarity=-0.097 Sum_probs=46.0
Q ss_pred CCHHHHHHHHHHHHhh-ccCCCCcchHHHHHHHHHHhhCC--CCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 8 CHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLP--DPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.+|.+.+++.++++.. ..+.....+....+++.+.+..+ .+.+.|+|+++|+||++.+++... ....+|++.
T Consensus 45 ~~~~v~~a~~~~~~~~~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~--~~gd~vl~~ 119 (399)
T 1c7n_A 45 NPPELIEGLKKYLDETVLGYTGPTEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFT--KPGDGVIII 119 (399)
T ss_dssp CCHHHHHHHHHHHHHCCCSSBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHC--CTTCEEEEC
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhc--CCCCEEEEc
Confidence 4789999999998753 11111123444556665554333 345689999999999999998653 222456654
No 92
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=97.69 E-value=5e-05 Score=49.81 Aligned_cols=74 Identities=8% Similarity=-0.035 Sum_probs=50.7
Q ss_pred CCCCCCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 4 PVGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 4 ~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
..++.+|.+.+++.++++. +. .....+...++.+.+.+.++.+.+.++|+++|++|++.+++.. .....+|+..
T Consensus 16 ~~~~~~~~v~~a~~~~~~~-~~-~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~--~~~gd~Vl~~ 89 (392)
T 2z9v_A 16 GPVNAYPEVLRGLGRTVLY-DY-DPAFQLLYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASL--ISPDDVVLNL 89 (392)
T ss_dssp SCCCCCHHHHHHTTSCCCC-TT-SHHHHHHHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHH--CCTTCCEEEE
T ss_pred CCcCCCHHHHHHHhccccc-cc-cHHHHHHHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHh--cCCCCEEEEe
Confidence 3456789999988776543 11 1111234567888888888655578999999999999999976 3333456654
No 93
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=97.67 E-value=9.8e-05 Score=47.92 Aligned_cols=60 Identities=12% Similarity=-0.013 Sum_probs=44.4
Q ss_pred CCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHH
Q psy6206 8 CHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLAR 70 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar 70 (83)
.+|++.+++.+++.... .++.+...++.+.|.+..+.+.+.++|+++|++|++.+++...
T Consensus 29 ~~~~v~~a~~~~~~~~~---~y~~~~~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~~l~ 88 (350)
T 3fkd_A 29 DKDHLEKHLVENLNCIR---HYPEPDAGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQAFR 88 (350)
T ss_dssp CCHHHHHHHHHTGGGGG---SCCCTTCHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHhHhHHh---cCCCCcHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHHC
Confidence 57899999988774432 2222222567778887776556799999999999999999765
No 94
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=97.67 E-value=0.00033 Score=46.16 Aligned_cols=62 Identities=19% Similarity=0.132 Sum_probs=47.7
Q ss_pred CCCCC--CHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHH
Q psy6206 4 PVGHC--HPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLAR 70 (83)
Q Consensus 4 ~lGh~--~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar 70 (83)
++|.. +|++.+++.++++... ..+.+...++.+.|.+.++. +.++|++||++|++.+++..+
T Consensus 7 ~~~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~l~~~la~~~~~--~~~i~~~sGt~a~~~al~~~~ 70 (390)
T 3b8x_A 7 PLASSTWDDLEYKAIQSVLDSKM---FTMGEYVKQYETQFAKTFGS--KYAVMVSSGSTANLLMIAALF 70 (390)
T ss_dssp CSCCCCCCHHHHHHHHHHHHHTC---CSSCHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHTT
T ss_pred cCCCCCCCHHHHHHHHHHHHcCC---CCCChHHHHHHHHHHHHHCC--CcEEEECCHHHHHHHHHHHHH
Confidence 44443 5889999999887642 22356678888999988854 478999999999999999874
No 95
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=97.66 E-value=0.00048 Score=44.83 Aligned_cols=73 Identities=14% Similarity=-0.069 Sum_probs=48.8
Q ss_pred CCCHHHHHHHHHHHHhh-ccCCCCcchHHHHHHHHHHhhCC--CCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 7 HCHPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLP--DPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 7 h~~p~i~~a~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
..+|++.+++.++++.. ........+....+++.+.+..+ .+.+.++|+++|++|++.+++.... .| .+|+..
T Consensus 36 ~~~~~v~~a~~~~~~~~~~~y~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~-~g-d~vl~~ 111 (377)
T 3fdb_A 36 STCPAVLQAITDAVQREAFGYQPDGSLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTP-AQ-SKVIVP 111 (377)
T ss_dssp CCCHHHHHHHHHHHHTTCCSSCCSSCCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSC-TT-CCEEEE
T ss_pred CCCHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHhcC-CC-CEEEEc
Confidence 46899999999999873 22111224555667777765432 3456899999999999999987532 23 345543
No 96
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=97.66 E-value=0.00085 Score=43.38 Aligned_cols=66 Identities=15% Similarity=0.116 Sum_probs=48.9
Q ss_pred CCCCCHHHHHHHHHHHHhhcc-C-CCC-----cchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHH
Q psy6206 5 VGHCHPAVVKAACTQLALLNT-N-NRF-----LHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLAR 70 (83)
Q Consensus 5 lGh~~p~i~~a~~~~~~~~~~-~-~~~-----~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar 70 (83)
.+..+|.+.+++.+++..... + ..+ ..+...++.+.+.+..+.+.+.++|+++|++|++.+++...
T Consensus 9 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~ 81 (382)
T 4hvk_A 9 AKPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYA 81 (382)
T ss_dssp CCCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhhcCCCcccchHHHHHHHHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhh
Confidence 456689999999999977521 1 111 12345678888888886655689999999999999999654
No 97
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=97.65 E-value=0.00022 Score=48.66 Aligned_cols=76 Identities=12% Similarity=0.041 Sum_probs=48.9
Q ss_pred CCCCCHHHHHHHHHHHHhhccCCC-----CcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh---c---
Q psy6206 5 VGHCHPAVVKAACTQLALLNTNNR-----FLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH---T--- 73 (83)
Q Consensus 5 lGh~~p~i~~a~~~~~~~~~~~~~-----~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~---~--- 73 (83)
.+|.+|++++++.++....+.... ...+...++.+.+.+.++.+. .++++++|++|+..|++++|.+ .
T Consensus 75 ~~~~~p~v~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~-~~~~~~ggt~a~~~al~~~~~~~~~~Gd~ 153 (474)
T 1wyu_B 75 TMKYNPKLHEEAARLFADLHPYQDPRTAQGALRLMWELGEYLKALTGMDA-ITLEPAAGAHGELTGILIIRAYHEDRGEG 153 (474)
T ss_dssp CCCCCCHHHHHHHHTTSSCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE-EECCCSSHHHHHHHHHHHHHHHHHHTTCT
T ss_pred cccCCHHHHHHHHHHHHhcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc-eeecChHHHHHHHHHHHHHHHHHHhcCCc
Confidence 456779998888776211111000 011345778888888875422 4678899999999999998864 2
Q ss_pred -CCCceEEe
Q psy6206 74 -NNDDVITQ 81 (83)
Q Consensus 74 -~r~~ii~~ 81 (83)
+|++||..
T Consensus 154 ~~r~~Vlv~ 162 (474)
T 1wyu_B 154 RTRRVVLVP 162 (474)
T ss_dssp TTCCEEEEE
T ss_pred cCCCEEEEe
Confidence 34567764
No 98
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=97.65 E-value=0.00011 Score=48.35 Aligned_cols=72 Identities=14% Similarity=-0.064 Sum_probs=44.4
Q ss_pred HHHHHHHHH-HHHhhcc--C-C-CCcchHHHHHHHHHHhhCC--CCCC--eEEeeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 10 PAVVKAACT-QLALLNT--N-N-RFLHDNLVLCARKLASLLP--DPLS--VCFFVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 10 p~i~~a~~~-~~~~~~~--~-~-~~~~~~~~~la~~l~~~~p--~~~~--~v~f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
|.|.+++.+ .++.... + . ....+....+++.+..... ...+ .++|+++|++|++.++++........+|+.
T Consensus 47 ~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~ 126 (397)
T 3fsl_A 47 QAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWV 126 (397)
T ss_dssp HHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEE
T ss_pred HHHHHHHHhhccCccccccCCCCCchHHHHHHHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEE
Confidence 899999998 7765211 1 1 1112333445555543221 0245 899999999999999987665554446665
Q ss_pred e
Q psy6206 81 Q 81 (83)
Q Consensus 81 ~ 81 (83)
.
T Consensus 127 ~ 127 (397)
T 3fsl_A 127 S 127 (397)
T ss_dssp E
T ss_pred e
Confidence 4
No 99
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=97.63 E-value=0.00024 Score=47.65 Aligned_cols=71 Identities=17% Similarity=0.163 Sum_probs=45.2
Q ss_pred CCCHHHHHHHHHHHHhhccCCCC-cchHHHHHHHHHHhhCC-----CCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 7 HCHPAVVKAACTQLALLNTNNRF-LHDNLVLCARKLASLLP-----DPLSVCFFVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 7 h~~p~i~~a~~~~~~~~~~~~~~-~~~~~~~la~~l~~~~p-----~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
..+|.+.+++.++++.... ..+ +.....++.+.+.+... ...++|+++++|++|++.+++.... .| .+|+.
T Consensus 71 ~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~~~~l~~-~g-d~vl~ 147 (427)
T 3dyd_A 71 PTDPEVTQAMKDALDSGKY-NGYAPSIGFLSSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLAN-PG-QNILV 147 (427)
T ss_dssp CCCHHHHHHHHHHHHHCCS-SSCCCTTCCHHHHHHHHHHHCBTTBCCCGGGEEEESSHHHHHHHHHHHHCC-TT-CEEEE
T ss_pred CCCHHHHHHHHHHHhcCcC-CCCCCCCCcHHHHHHHHHHHhhcCCCCChHHEEEecCcHHHHHHHHHHhcC-CC-CEEEE
Confidence 4568899999998876321 122 12223345555554443 2356899999999999999997643 23 34554
No 100
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=97.61 E-value=0.0006 Score=44.57 Aligned_cols=74 Identities=11% Similarity=-0.061 Sum_probs=46.8
Q ss_pred CCCCCCHHHHHHHHHHHHhhccCCCCcc-hHHHHHHHHHHhhC----CCC--CC-eEEeeCChHHHHHHHHHHHHhhcCC
Q psy6206 4 PVGHCHPAVVKAACTQLALLNTNNRFLH-DNLVLCARKLASLL----PDP--LS-VCFFVNSGSEANDLALRLARVHTNN 75 (83)
Q Consensus 4 ~lGh~~p~i~~a~~~~~~~~~~~~~~~~-~~~~~la~~l~~~~----p~~--~~-~v~f~~sGseA~e~Alk~ar~~~~r 75 (83)
.+| .+|.+.+++.++++... ...++. ....++.+.+.+.+ +.+ .+ .|+|+++|+||++.+++.... .|
T Consensus 36 ~~~-~~~~v~~a~~~~~~~~~-~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~l~~-~g- 111 (376)
T 2dou_A 36 DLP-PPEAPLKALAEALNDPT-TYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLAHLLLALTE-PE- 111 (376)
T ss_dssp CCC-CCHHHHHHHHHHTTCGG-GSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHHHHHHHHCC-TT-
T ss_pred CCC-CCHHHHHHHHHHHhCCC-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhcC-CC-
Confidence 345 37999999999886421 123333 23455556555544 432 24 899999999999999986532 22
Q ss_pred CceEEe
Q psy6206 76 DDVITQ 81 (83)
Q Consensus 76 ~~ii~~ 81 (83)
.+|++.
T Consensus 112 d~vl~~ 117 (376)
T 2dou_A 112 DLLLLP 117 (376)
T ss_dssp CEEEEE
T ss_pred CEEEEC
Confidence 456654
No 101
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=97.60 E-value=0.00085 Score=43.99 Aligned_cols=72 Identities=17% Similarity=0.001 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHHHHhh-ccCCC--CcchHHHHHHHHHHhhCC--CCCC-eEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 8 CHPAVVKAACTQLALL-NTNNR--FLHDNLVLCARKLASLLP--DPLS-VCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~-~~~~~--~~~~~~~~la~~l~~~~p--~~~~-~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.+|.+.+++.++++.. ..+.. ...+....+++.+.+..+ .+.+ .|+|+++|++|++.+++... ....+|+..
T Consensus 44 ~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~--~~gd~vl~~ 121 (386)
T 1u08_A 44 GPRYLQERLAHHVAQGANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALV--RNGDEVICF 121 (386)
T ss_dssp CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHC--CTTCEEEEE
T ss_pred CCHHHHHHHHHHHHhhccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhC--CCCCEEEEe
Confidence 5689999999998762 11111 123344556666654333 3456 89999999999999999752 222456654
No 102
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=97.58 E-value=0.00073 Score=44.43 Aligned_cols=74 Identities=9% Similarity=-0.030 Sum_probs=48.5
Q ss_pred CCCHHHHHHHHHHHHhh-----ccC-C-CCcchHHHHHHHHHHhhCC--CCCCeEEeeCChHHHHHHHHHHHHhhcCCCc
Q psy6206 7 HCHPAVVKAACTQLALL-----NTN-N-RFLHDNLVLCARKLASLLP--DPLSVCFFVNSGSEANDLALRLARVHTNNDD 77 (83)
Q Consensus 7 h~~p~i~~a~~~~~~~~-----~~~-~-~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ 77 (83)
..+|.+.+++.++++.. ..+ . ....+....+++.+.+..+ .+.+.|+|+++|++|++.+++.... .|+.+
T Consensus 48 ~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~-~g~d~ 126 (398)
T 3ele_A 48 PAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTS-DAYDE 126 (398)
T ss_dssp CCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCC-STTCE
T ss_pred CCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcC-CCCCE
Confidence 35789999999998762 111 1 1113444666666655433 3456899999999999999997632 34346
Q ss_pred eEEe
Q psy6206 78 VITQ 81 (83)
Q Consensus 78 ii~~ 81 (83)
|+..
T Consensus 127 vl~~ 130 (398)
T 3ele_A 127 FITI 130 (398)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6654
No 103
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=97.58 E-value=0.00057 Score=45.31 Aligned_cols=72 Identities=14% Similarity=-0.076 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHHHhh-c-cCC-CCcchHHHHHHHHHHhhCC--CCCC-eEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 8 CHPAVVKAACTQLALL-N-TNN-RFLHDNLVLCARKLASLLP--DPLS-VCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~-~-~~~-~~~~~~~~~la~~l~~~~p--~~~~-~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.+|.+.+++.++++.. . ... ....+....+++.+.+..+ .+.+ .|+|+++|++|++.+++.... .| .+|+..
T Consensus 39 ~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~-~g-d~Vl~~ 116 (411)
T 2o0r_A 39 GPPKMLQAAQDAIAGGVNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVE-PG-SEVLLI 116 (411)
T ss_dssp CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCC-TT-CEEEEE
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcC-CC-CEEEEe
Confidence 4789999999999762 1 111 1123444566666655433 3355 899999999999999997632 23 456654
No 104
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=97.55 E-value=0.00011 Score=47.72 Aligned_cols=66 Identities=20% Similarity=0.163 Sum_probs=43.5
Q ss_pred CHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceE
Q psy6206 9 HPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVI 79 (83)
Q Consensus 9 ~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii 79 (83)
+|++.+++.+.+. .....+.+...+|.+.|.+..+ .+...|++||++|++.+++......++..|+
T Consensus 28 ~p~v~~ai~~~~~---~~~~~~~~~~~~l~~~la~~~~--~~~~i~~~~g~~a~~~a~~~~~~~g~~~vvi 93 (359)
T 3pj0_A 28 LTEALQNIDDNLE---SDIYGNGAVIEDFETKIAKILG--KQSAVFFPSGTMAQQIALRIWADRKENRRVA 93 (359)
T ss_dssp HHHHTTTSCTTCB---CCBTTBSHHHHHHHHHHHHHHT--CSEEEEESCHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHhhcc---cCcccCCHHHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 4666666665221 1112234667888999988874 3455677999999999999877655443344
No 105
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=97.55 E-value=0.00044 Score=46.03 Aligned_cols=65 Identities=17% Similarity=0.274 Sum_probs=48.1
Q ss_pred CCCCHHHHHHHHHHHHhhc-cC-CCCc-----chHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHH
Q psy6206 6 GHCHPAVVKAACTQLALLN-TN-NRFL-----HDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLAR 70 (83)
Q Consensus 6 Gh~~p~i~~a~~~~~~~~~-~~-~~~~-----~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar 70 (83)
++.+|++++++.++++... .+ ..+. .+...++.+.|.+.++.+.+.++|+++|+||++.+++...
T Consensus 28 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~ 99 (432)
T 3a9z_A 28 TPLEPEVIQAVTEAMKEAWGNPSSSYVAGRKAKDIINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTV 99 (432)
T ss_dssp CCCCHHHHHHHHHHHHHCCSCTTCSSHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCccCcHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHHH
Confidence 3678999999999987642 11 2221 1234678888888876545689999999999999999764
No 106
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=97.55 E-value=0.00024 Score=47.17 Aligned_cols=75 Identities=11% Similarity=0.008 Sum_probs=43.8
Q ss_pred CCCCCCHHHHHHHHHHHHhhc---cC-CCCcchHHHHHHHHHHhhCC--CCC-CeEEeeCChHHHHHHHHHHHHhhcCCC
Q psy6206 4 PVGHCHPAVVKAACTQLALLN---TN-NRFLHDNLVLCARKLASLLP--DPL-SVCFFVNSGSEANDLALRLARVHTNND 76 (83)
Q Consensus 4 ~lGh~~p~i~~a~~~~~~~~~---~~-~~~~~~~~~~la~~l~~~~p--~~~-~~v~f~~sGseA~e~Alk~ar~~~~r~ 76 (83)
.+| .+|.+.+++.++++... .. .....+....+++.+.+..+ .+. +.|+|+++|++|++.+++... ....
T Consensus 48 ~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~--~~gd 124 (412)
T 2x5d_A 48 DGP-TPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATL--DHGD 124 (412)
T ss_dssp CSC-CCHHHHHHHHHTC---------CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHC--CTTC
T ss_pred CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhC--CCCC
Confidence 344 67999999998876531 11 11122334455555543323 234 589999999999999999752 2224
Q ss_pred ceEEe
Q psy6206 77 DVITQ 81 (83)
Q Consensus 77 ~ii~~ 81 (83)
+|+..
T Consensus 125 ~Vl~~ 129 (412)
T 2x5d_A 125 TILVP 129 (412)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 56654
No 107
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=97.55 E-value=0.00034 Score=44.90 Aligned_cols=59 Identities=25% Similarity=0.190 Sum_probs=46.7
Q ss_pred CCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 8 CHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
-+|.+.+++.++++.. ..++.+...++.+.+.+..+.+.+.++|+++++++++.+++..
T Consensus 30 ~~~~v~~a~~~~~~~~---~~y~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~~~~ 88 (337)
T 3p1t_A 30 VEPRVQAAIAAAAARI---NRYPFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRISAEF 88 (337)
T ss_dssp CCHHHHHHHHHHGGGT---TSCCTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHhhhhh---ccCCCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHhc
Confidence 4689999998877654 2345566678888888887655679999999999999999865
No 108
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=97.53 E-value=0.00028 Score=47.05 Aligned_cols=72 Identities=13% Similarity=-0.080 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHhhc---cC-CCCcchHHHHHHHHHHhhCC--CCCC--eEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 10 PAVVKAACTQLALLN---TN-NRFLHDNLVLCARKLASLLP--DPLS--VCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 10 p~i~~a~~~~~~~~~---~~-~~~~~~~~~~la~~l~~~~p--~~~~--~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
|.|.+++.++++... +. .....+....+++.+..... ...+ .++++++|++|++.++++........+|+..
T Consensus 70 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~ 149 (420)
T 4f4e_A 70 RAVRDAEKARVEAGLPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAIS 149 (420)
T ss_dssp HHHHHHHHHHHHTCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred HHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEe
Confidence 899999999887621 11 11122334555555543221 0234 8999999999999999876655444456653
No 109
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=97.53 E-value=0.0012 Score=45.03 Aligned_cols=66 Identities=12% Similarity=0.045 Sum_probs=47.7
Q ss_pred CCCHHHHHHHHHHHHhh-cc-CC---CCc--chHHHHHHHHHHhhCCCC--CCeEEeeCChHHHHHHHHHHHHhh
Q psy6206 7 HCHPAVVKAACTQLALL-NT-NN---RFL--HDNLVLCARKLASLLPDP--LSVCFFVNSGSEANDLALRLARVH 72 (83)
Q Consensus 7 h~~p~i~~a~~~~~~~~-~~-~~---~~~--~~~~~~la~~l~~~~p~~--~~~v~f~~sGseA~e~Alk~ar~~ 72 (83)
+.++.+.+++.+++... .. .. .++ .+...++.+.+.+.++.+ .+.++|+++|+||+..+++.++.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~ 149 (497)
T 3mc6_A 75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMY 149 (497)
T ss_dssp CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHH
Confidence 45688999999988774 21 11 111 133456777788887643 568999999999999999999875
No 110
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=97.51 E-value=0.00061 Score=44.66 Aligned_cols=72 Identities=13% Similarity=-0.031 Sum_probs=46.1
Q ss_pred CCHHHHHHHHHHHHhhc-cCCC--CcchHHHHHHHHHHhhCC--CCCCe-EEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 8 CHPAVVKAACTQLALLN-TNNR--FLHDNLVLCARKLASLLP--DPLSV-CFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~-~~~~--~~~~~~~~la~~l~~~~p--~~~~~-v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.+|++.+++.++++... .+.. ...+....+++.+.+..+ .+.+. ++++++|++|++.+++... ....+|+..
T Consensus 40 ~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~--~~gd~vl~~ 117 (389)
T 1gd9_A 40 TPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFL--KDGEEVLIP 117 (389)
T ss_dssp CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTC--CTTCEEEEE
T ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhC--CCCCEEEEc
Confidence 57899999999987631 1111 123444566666654333 23567 9999999999999998652 222456654
No 111
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=97.50 E-value=0.00012 Score=47.16 Aligned_cols=70 Identities=13% Similarity=0.131 Sum_probs=47.2
Q ss_pred CCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 8 CHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.+|++.+++.++++. +. .....+...++.+.|.+..+.+.+.++++++|++|++.+++... ....+|++.
T Consensus 12 ~~~~v~~a~~~~~~~-~~-~~~~~~~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~--~~gd~vl~~ 81 (352)
T 1iug_A 12 LHPKALEALARPQLH-HR-TEAAREVFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLF--APGERVLVP 81 (352)
T ss_dssp CCHHHHHHHHSCCCC-TT-SHHHHHHHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHC--CTTCEEEEE
T ss_pred CCHHHHHHhccCCCC-cc-CHHHHHHHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhcc--CCCCeEEEE
Confidence 468899888776542 11 11112345778888888876545689999999999999999762 223456654
No 112
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=97.49 E-value=0.0003 Score=46.29 Aligned_cols=71 Identities=17% Similarity=0.020 Sum_probs=49.0
Q ss_pred CCHHHHHHHHHHHHhhc---c-CCCCcchHHHHHHHHHHhhCCCC--C-CeEEeeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 8 CHPAVVKAACTQLALLN---T-NNRFLHDNLVLCARKLASLLPDP--L-SVCFFVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~---~-~~~~~~~~~~~la~~l~~~~p~~--~-~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
.+|+|.+++.++++... . ......+....+++.+.+..+.+ . +.++|+++|++|++.+++.. .....+|++
T Consensus 54 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~l--~~~gd~vl~ 131 (407)
T 3nra_A 54 PTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALFLAVAAT--VARGDKVAI 131 (407)
T ss_dssp CCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHTT--CCTTCEEEE
T ss_pred CcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHh--CCCCCEEEE
Confidence 57889999999987631 1 12233456677888887766432 2 68999999999999999854 222334554
No 113
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=97.48 E-value=0.001 Score=44.71 Aligned_cols=63 Identities=19% Similarity=-0.006 Sum_probs=48.0
Q ss_pred cCCCCC--CHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHH
Q psy6206 3 LPVGHC--HPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLAR 70 (83)
Q Consensus 3 ~~lGh~--~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar 70 (83)
++++.. +|++.+++.++++... .++.+...++.+.|.+.++. +.++|++||++|++.+++..+
T Consensus 34 i~~~~~~~~~~~~~a~~~~~~~~~---~~~~~~~~~l~~~la~~~g~--~~~i~~~sGt~a~~~al~~l~ 98 (437)
T 3bb8_A 34 VPPSGKVIGTKELQLMVEASLDGW---LTTGRFNDAFEKKLGEYLGV--PYVLTTTSGSSANLLALTALT 98 (437)
T ss_dssp BCSCCCCCCHHHHHHHHHHHHHCC---CBSCHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHTT
T ss_pred ccCCCCCCCHHHHHHHHHHHHcCC---cCCChHHHHHHHHHHHHHCC--CcEEEeCCHHHHHHHHHHHhh
Confidence 455655 4889999988887542 23345678888999988854 478999999999999999763
No 114
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=97.46 E-value=0.0001 Score=48.08 Aligned_cols=73 Identities=15% Similarity=0.187 Sum_probs=48.7
Q ss_pred CCCCCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCC-CCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 5 VGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDP-LSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 5 lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~-~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.++.+|++.+++.+++.. +. +....+...++++.+.+..+.+ .+.++|+++|++|++.+++... ....+|++.
T Consensus 28 ~~~~~~~v~~a~~~~~~~-~~-~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~--~~gd~vl~~ 101 (386)
T 2dr1_A 28 PVACFPEVLEIMKVQMFS-HR-SKEYRKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGV--SKGGKVLVT 101 (386)
T ss_dssp SCCCCHHHHHHTTSCCCC-TT-SHHHHHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHS--CTTCEEEEE
T ss_pred CcCCcHHHHHHHhccccc-cc-CHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhh--cCCCeEEEE
Confidence 456678888888765532 11 1112355677888888877643 4579999999999999999652 233456654
No 115
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=97.45 E-value=0.00045 Score=46.14 Aligned_cols=75 Identities=9% Similarity=-0.083 Sum_probs=48.3
Q ss_pred CCCCCHHHHHHHHHHHHhhc-cCCCC-----cchHHHHHHHHHHhhCC---CCCCeEEeeCChHHHHHHHHHHHHhhcCC
Q psy6206 5 VGHCHPAVVKAACTQLALLN-TNNRF-----LHDNLVLCARKLASLLP---DPLSVCFFVNSGSEANDLALRLARVHTNN 75 (83)
Q Consensus 5 lGh~~p~i~~a~~~~~~~~~-~~~~~-----~~~~~~~la~~l~~~~p---~~~~~v~f~~sGseA~e~Alk~ar~~~~r 75 (83)
.||.+|++.+++.++++... ....+ ..+....+++.+.+..+ .+.+.|+|+++|++|++.+++.... .|
T Consensus 56 ~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~-~g- 133 (425)
T 1vp4_A 56 ETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLD-DE- 133 (425)
T ss_dssp GGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCC-TT-
T ss_pred ccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCC-CC-
Confidence 46778999999999887631 01112 23444566666644323 3456899999999999999986521 22
Q ss_pred CceEEe
Q psy6206 76 DDVITQ 81 (83)
Q Consensus 76 ~~ii~~ 81 (83)
.+|++.
T Consensus 134 d~Vl~~ 139 (425)
T 1vp4_A 134 SYCVLD 139 (425)
T ss_dssp CEEEEE
T ss_pred CEEEEe
Confidence 356654
No 116
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=97.45 E-value=0.00022 Score=47.15 Aligned_cols=69 Identities=17% Similarity=0.030 Sum_probs=39.9
Q ss_pred cCCCCCC----HHHHHHHHHHHHhhc-c------CCCCcc-hHHHHHHHHHHhhC------CCCCCeEEeeCChHHHHHH
Q psy6206 3 LPVGHCH----PAVVKAACTQLALLN-T------NNRFLH-DNLVLCARKLASLL------PDPLSVCFFVNSGSEANDL 64 (83)
Q Consensus 3 ~~lGh~~----p~i~~a~~~~~~~~~-~------~~~~~~-~~~~~la~~l~~~~------p~~~~~v~f~~sGseA~e~ 64 (83)
++||+++ |.+.+++.+++.+.. . ...|.. .-..+|.+.+.+.+ +.+.++|+|+++|+||++.
T Consensus 34 i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~ 113 (417)
T 3g7q_A 34 IMLGGGNPAHIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFY 113 (417)
T ss_dssp EECSCCCCCCCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHH
T ss_pred eEecCcCCCCCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHH
Confidence 5677764 334566666554430 0 012221 11234444444432 3345799999999999999
Q ss_pred HHHHHHh
Q psy6206 65 ALRLARV 71 (83)
Q Consensus 65 Alk~ar~ 71 (83)
+++....
T Consensus 114 ~~~~l~~ 120 (417)
T 3g7q_A 114 LFNLFAG 120 (417)
T ss_dssp HHHHHSB
T ss_pred HHHHHcC
Confidence 9997754
No 117
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=97.44 E-value=0.0009 Score=44.12 Aligned_cols=75 Identities=16% Similarity=0.010 Sum_probs=46.7
Q ss_pred CCCCCCHHHHHHHHHHHHhhc-cCC--CCcchHHHHHHHHHHhhCC--CCCCeEEeeCChHHHHHHHHHHHHhhcCCCce
Q psy6206 4 PVGHCHPAVVKAACTQLALLN-TNN--RFLHDNLVLCARKLASLLP--DPLSVCFFVNSGSEANDLALRLARVHTNNDDV 78 (83)
Q Consensus 4 ~lGh~~p~i~~a~~~~~~~~~-~~~--~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~i 78 (83)
.+|+ +|.+.+++.++++... .+. ....+....+++.+.+..+ .+.+.++++++|++|++.+++... ....+|
T Consensus 52 ~~~~-~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~--~~gd~V 128 (389)
T 1o4s_A 52 DFPT-PEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALL--DPGDEV 128 (389)
T ss_dssp SSCC-CHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHC--CTTCEE
T ss_pred CCCC-CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhC--CCCCEE
Confidence 3454 6899999999886531 111 1123344556666544322 235689999999999999999762 222356
Q ss_pred EEe
Q psy6206 79 ITQ 81 (83)
Q Consensus 79 i~~ 81 (83)
+..
T Consensus 129 l~~ 131 (389)
T 1o4s_A 129 IVF 131 (389)
T ss_dssp EEE
T ss_pred EEc
Confidence 554
No 118
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=97.44 E-value=0.0027 Score=41.80 Aligned_cols=73 Identities=21% Similarity=0.192 Sum_probs=49.4
Q ss_pred CCC-CCHHHHHHHHHHHHhhcc-C----CCC-cchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHH-HhhcCCC
Q psy6206 5 VGH-CHPAVVKAACTQLALLNT-N----NRF-LHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLA-RVHTNND 76 (83)
Q Consensus 5 lGh-~~p~i~~a~~~~~~~~~~-~----~~~-~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~a-r~~~~r~ 76 (83)
+|+ .+|++.+++.++++.... . ..+ .++...++.+.|.+.++. .+.++| +||++++..++++. +..+|.
T Consensus 57 ~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~~~i~~-~sG~~a~~~~~~~l~~~~~gd- 133 (401)
T 2bwn_A 57 LGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQK-EAALVF-SSAYNANDATLSTLRVLFPGL- 133 (401)
T ss_dssp TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTTC-SEEEEE-SCHHHHHHHHHHHHHHHSTTC-
T ss_pred ccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhCC-CcEEEE-CCcHHHHHHHHHHHhcCCCCC-
Confidence 454 378999999999987421 1 112 345678899999998864 344555 88999999999864 333453
Q ss_pred ceEE
Q psy6206 77 DVIT 80 (83)
Q Consensus 77 ~ii~ 80 (83)
.|+.
T Consensus 134 ~Vl~ 137 (401)
T 2bwn_A 134 IIYS 137 (401)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5554
No 119
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=97.44 E-value=0.0012 Score=43.23 Aligned_cols=72 Identities=17% Similarity=-0.036 Sum_probs=46.3
Q ss_pred CCHHHHHHHHHHHHhh-ccCCC--CcchHHHHHHHHHHhhCC--CCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 8 CHPAVVKAACTQLALL-NTNNR--FLHDNLVLCARKLASLLP--DPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~-~~~~~--~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.+|.+.+++.++++.. ..+.. ...+....+++.+.+..+ .+.+.++|+++|++|++.+++.... .| .+|+..
T Consensus 44 ~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~-~g-d~vl~~ 120 (388)
T 1j32_A 44 TPKHIVEAAKAALEQGKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIE-PG-DEVIIP 120 (388)
T ss_dssp CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCC-TT-CEEEEE
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcC-CC-CEEEEc
Confidence 4689999999988653 11111 123444566666654332 2356899999999999999997632 23 356654
No 120
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=97.43 E-value=0.0014 Score=43.43 Aligned_cols=66 Identities=26% Similarity=0.182 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 10 PAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 10 p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
|++.+++.++++.... .+.+...++.+.|.+.++. +.++|+++|++|++.+++..+.-.| .+|+..
T Consensus 44 ~~v~~a~~~~~~~~~y---~~~~~~~~l~~~la~~~~~--~~~v~~~~Gt~a~~~~l~~~~~~~g-d~vl~~ 109 (399)
T 2oga_A 44 AETDAAIARVLDSGRY---LLGPELEGFEAEFAAYCET--DHAVGVNSGMDALQLALRGLGIGPG-DEVIVP 109 (399)
T ss_dssp HHHHHHHHHHHHHTCC---SSSHHHHHHHHHHHHHTTS--SEEEEESCHHHHHHHHHHHTTCCTT-CEEEEE
T ss_pred HHHHHHHHHHHhcCCC---CCchhHHHHHHHHHHHHCC--CeEEEecCHHHHHHHHHHHhCCCCc-CEEEEC
Confidence 7888898888865311 1235678899999998854 3788999999999999987642233 356654
No 121
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=97.43 E-value=0.00045 Score=45.90 Aligned_cols=75 Identities=4% Similarity=-0.165 Sum_probs=45.8
Q ss_pred CCCCCCHHHHHHHHHHHHhh--c-cCC-CCcchHHHHHHHHHHhhCCCC---CCeEEeeCChHHHHHHHHHHHHhhcCCC
Q psy6206 4 PVGHCHPAVVKAACTQLALL--N-TNN-RFLHDNLVLCARKLASLLPDP---LSVCFFVNSGSEANDLALRLARVHTNND 76 (83)
Q Consensus 4 ~lGh~~p~i~~a~~~~~~~~--~-~~~-~~~~~~~~~la~~l~~~~p~~---~~~v~f~~sGseA~e~Alk~ar~~~~r~ 76 (83)
.+| .+|.+.+++.++++.. . ... ....+....+++.+.+..+.+ .+.|+|+++|++|++.+++.... .| .
T Consensus 58 ~~~-~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~-~g-d 134 (404)
T 2o1b_A 58 DGP-TPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVIN-PG-D 134 (404)
T ss_dssp SSC-CCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCC-TT-C
T ss_pred CCC-CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcC-CC-C
Confidence 345 4799999999987542 1 111 112233455555554433432 26899999999999999997532 22 3
Q ss_pred ceEEe
Q psy6206 77 DVITQ 81 (83)
Q Consensus 77 ~ii~~ 81 (83)
+|+..
T Consensus 135 ~Vl~~ 139 (404)
T 2o1b_A 135 YVLLP 139 (404)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 56554
No 122
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=97.43 E-value=0.0001 Score=48.28 Aligned_cols=70 Identities=10% Similarity=-0.021 Sum_probs=47.3
Q ss_pred CCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCC-eEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 8 CHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLS-VCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~-~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.+|++.+++.+++... . ...+.+...++.+.+.+.++.+.+ .++|+++|+||++.+++... ....+|+..
T Consensus 30 ~~~~v~~a~~~~~~~~-~-~~~~~~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~--~~gd~vl~~ 100 (393)
T 2huf_A 30 APQRVLDAMSRPILGH-L-HPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLL--EDGDVILIG 100 (393)
T ss_dssp CCHHHHHHTTSCCCCT-T-SHHHHHHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHC--CTTCEEEEE
T ss_pred CCHHHHHHHHhhhccC-C-CHHHHHHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHh--CCCCEEEEE
Confidence 4688888887655431 1 112234567788888888765444 79999999999999999762 223456654
No 123
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=97.42 E-value=0.00031 Score=46.73 Aligned_cols=76 Identities=11% Similarity=-0.067 Sum_probs=49.3
Q ss_pred cCCCCCCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEec
Q psy6206 3 LPVGHCHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQD 82 (83)
Q Consensus 3 ~~lGh~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~ 82 (83)
..+.+.+++...++.+.....+..+.++++...+|.+.|.+..+. +.+++++||++|++.+++.. .....+||+.+
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~--~~~i~~~sG~~ai~~~~~~~--~~~gd~vl~~~ 105 (389)
T 3acz_A 30 STFCFDSTQQGADLFMGKGEGHIYSRLGNPTVEQFEEMVCSIEGA--AGSAAFGSGMGAISSSTLAF--LQKGDHLIAGD 105 (389)
T ss_dssp SBBCCSSHHHHHHHHTTCSSCCCBTTTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHTTT--CCTTCEEEEES
T ss_pred CceecCChHHHHHhhcCCCCCcccCCCCChHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHH--hCCCCEEEEeC
Confidence 456666665444332221112334556778888999999998854 37888899999999999854 22334566543
No 124
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=97.41 E-value=0.00077 Score=44.93 Aligned_cols=52 Identities=25% Similarity=0.181 Sum_probs=40.1
Q ss_pred CCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEec
Q psy6206 27 NRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQD 82 (83)
Q Consensus 27 ~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~ 82 (83)
+.+.++...+|.++|.+..+. +.++|++||++|++.+++.. .....+||+.+
T Consensus 61 ~r~~~~~~~~l~~~la~~~g~--~~~~~~~sGt~A~~~al~~~--~~~gd~Vi~~~ 112 (392)
T 3qhx_A 61 ARTGNPTRTALEAALAAVEDA--AFGRAFSSGMAAADCALRAM--LRPGDHVVIPD 112 (392)
T ss_dssp TTTCCHHHHHHHHHHHHHTTC--SEEEEESSHHHHHHHHHHHH--CCTTCEEEEET
T ss_pred cCCCChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHH--hCCCCEEEEeC
Confidence 445677788999999999854 48999999999999999965 23334676653
No 125
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=97.39 E-value=0.00023 Score=46.84 Aligned_cols=69 Identities=13% Similarity=0.097 Sum_probs=44.3
Q ss_pred CHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCe-EEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 9 HPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSV-CFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 9 ~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~-v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
+|++.+++.+++.. +. .....+...++.+.+.+..+.+.+. ++|++||++|++.+++.. .....+||+.
T Consensus 25 ~~~v~~a~~~~~~~-~~-~~~~~~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~--~~~gd~Vl~~ 94 (411)
T 3nnk_A 25 DPRVLRAMSSQLIG-QY-DPAMTHYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSA--IRPGDKVLVP 94 (411)
T ss_dssp CHHHHHHHTSCCCC-TT-CHHHHHHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHH--CCTTCEEEEE
T ss_pred CHHHHHHhhccccc-cc-cHHHHHHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHh--cCCCCEEEEe
Confidence 57777777654311 11 1111244577888888877654444 889999999999999976 3344466654
No 126
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=97.39 E-value=0.0013 Score=43.05 Aligned_cols=67 Identities=18% Similarity=0.057 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 9 HPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 9 ~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.|++.+++.++++.... .+.+...++.+.|.+.++. +.+++++||++|++.+++..+.-.| .+|+..
T Consensus 19 ~~~~~~a~~~~~~~~~~---~~~~~~~~l~~~la~~~~~--~~~~~~~~gt~al~~~~~~~~~~~g-d~Vl~~ 85 (393)
T 1mdo_A 19 GAEELAAVKTVLDSGWI---TTGPKNQELEAAFCRLTGN--QYAVAVSSATAGMHIALMALGIGEG-DEVITP 85 (393)
T ss_dssp CHHHHHHHHHHHHHTCC---SSSHHHHHHHHHHHHHHCC--SEEEEESCHHHHHHHHHHHTTCCTT-CEEEEE
T ss_pred CHHHHHHHHHHHhcCCc---CCChHHHHHHHHHHHHhCC--CcEEEecChHHHHHHHHHHcCCCCC-CEEEeC
Confidence 47888999888876421 2346677888999988853 5899999999999999997642223 356553
No 127
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=97.35 E-value=0.0013 Score=43.13 Aligned_cols=69 Identities=22% Similarity=0.181 Sum_probs=48.1
Q ss_pred CHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 9 HPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 9 ~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.|++.+++.++++... ....+.+...++.+.|.+.++. +...+.+||++|++.+++..+.-.| .+||+.
T Consensus 16 ~~~~~~a~~~~l~~~~-~~~~~~~~~~~l~~~la~~~~~--~~~i~~~sGt~al~~~l~~l~~~~g-d~Vi~~ 84 (388)
T 1b9h_A 16 DDAERNGLVRALEQGQ-WWRMGGDEVNSFEREFAAHHGA--AHALAVTNGTHALELALQVMGVGPG-TEVIVP 84 (388)
T ss_dssp CHHHHHHHHHHHHTSC-CBTTTCSHHHHHHHHHHHHTTC--SEEEEESCHHHHHHHHHHHTTCCTT-CEEEEE
T ss_pred CHHHHHHHHHHHHcCC-eeecCCHHHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHHcCCCCc-CEEEEC
Confidence 3889999999987631 1223345677899999998854 3566777899999999997642233 356553
No 128
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=97.35 E-value=0.0014 Score=43.08 Aligned_cols=70 Identities=16% Similarity=-0.100 Sum_probs=42.7
Q ss_pred CHHHHHHHHHHHHhh-c-cCC-CCcchHHHHHHHHHHhhC--CCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 9 HPAVVKAACTQLALL-N-TNN-RFLHDNLVLCARKLASLL--PDPLSVCFFVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 9 ~p~i~~a~~~~~~~~-~-~~~-~~~~~~~~~la~~l~~~~--p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
+|++.+++.++++.. . ... ....+....+++.+.+.. +.+.+.|+|+++|+||++.+++.... .| .+|+.
T Consensus 46 ~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~-~g-d~vl~ 120 (391)
T 3h14_A 46 PRGAVEALAKSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFD-SG-DRVGI 120 (391)
T ss_dssp CHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCC-TT-CEEEE
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcC-CC-CEEEE
Confidence 788999999988652 1 111 112334455666655432 23456999999999999999986532 23 34554
No 129
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=97.35 E-value=0.0017 Score=43.28 Aligned_cols=63 Identities=11% Similarity=0.018 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHhhccCCCCc--chHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 10 PAVVKAACTQLALLNTNNRFL--HDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 10 p~i~~a~~~~~~~~~~~~~~~--~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
|++.+++.+.++.. .++ .+...++.+.|.+.++ .+.++|+++|++|++.+++... .| .+|++.
T Consensus 32 ~~~~~a~~~~~~~~----~y~~~~~~~~~l~~~la~~~~--~~~v~~~~ggt~al~~~l~~l~--~g-d~Vlv~ 96 (424)
T 2po3_A 32 ARLYERLDRALDSQ----WLSNGGPLVREFEERVAGLAG--VRHAVATCNATAGLQLLAHAAG--LT-GEVIMP 96 (424)
T ss_dssp HHHHHHHHHHHHHT----CCSSSCHHHHHHHHHHHHHHT--SSEEEEESCHHHHHHHHHHHHT--CC-SEEEEE
T ss_pred HHHHHHHHHHHhcC----CcccCCHHHHHHHHHHHHHhC--CCeEEEeCCHHHHHHHHHHHcC--CC-CEEEEC
Confidence 57888888877653 233 3567788899998884 3589999999999999999764 34 456654
No 130
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=97.34 E-value=0.00046 Score=45.47 Aligned_cols=71 Identities=8% Similarity=-0.104 Sum_probs=45.0
Q ss_pred CHHHHHHHHHHHHhh--ccCCC--CcchHHHHHHHHHHhhCC--CCC-CeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 9 HPAVVKAACTQLALL--NTNNR--FLHDNLVLCARKLASLLP--DPL-SVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 9 ~p~i~~a~~~~~~~~--~~~~~--~~~~~~~~la~~l~~~~p--~~~-~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
+|.+.+++.++++.. ..+.. ...+....+++.+.+..+ ... +.|+|+++|++|++.+++... ....+|+..
T Consensus 38 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~--~~gd~vl~~ 115 (410)
T 3e2y_A 38 PSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLV--DPGDEVIIM 115 (410)
T ss_dssp CHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHC--CTTCEEEEE
T ss_pred CHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhc--CCCCEEEEe
Confidence 577999999988753 11111 123445566666665332 223 689999999999999998762 223356553
No 131
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=97.33 E-value=0.00025 Score=46.70 Aligned_cols=76 Identities=9% Similarity=0.012 Sum_probs=48.9
Q ss_pred CCCCCCHHHHHHHHHHHHhhccC--CCCcchHHHHHHHHHHhhCCCCCCeEE-eeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 4 PVGHCHPAVVKAACTQLALLNTN--NRFLHDNLVLCARKLASLLPDPLSVCF-FVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 4 ~lGh~~p~i~~a~~~~~~~~~~~--~~~~~~~~~~la~~l~~~~p~~~~~v~-f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
.+|+..+.+.+++.+++.+.... .....+...++.+.|.+..+.+.+.++ +++||++|++.+++.. +....+||.
T Consensus 14 ~~~p~p~~~~~~v~~a~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l--~~~gd~Vl~ 91 (416)
T 3isl_A 14 IMTPGPVEVDPRVLRVMSTPVVGQFDPAFTGIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASV--IEPEDDVLI 91 (416)
T ss_dssp ECSSSSCCCCHHHHHHTTSCCCCTTSHHHHHHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHH--CCTTCEEEE
T ss_pred eecCCCcCcCHHHHHHhcccCCCCccHHHHHHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHh--cCCCCEEEE
Confidence 46776655666666655542111 111234467888999998876555555 8999999999999865 444456665
Q ss_pred e
Q psy6206 81 Q 81 (83)
Q Consensus 81 ~ 81 (83)
.
T Consensus 92 ~ 92 (416)
T 3isl_A 92 P 92 (416)
T ss_dssp E
T ss_pred e
Confidence 4
No 132
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=97.32 E-value=0.00052 Score=45.46 Aligned_cols=73 Identities=10% Similarity=-0.093 Sum_probs=45.0
Q ss_pred CCCHHHHHHHHHHHHhhcc--CC--CCcchHHHHHHHHHHhh--------CCCCCCeEEeeCChHHHHHHHHHHHHhhcC
Q psy6206 7 HCHPAVVKAACTQLALLNT--NN--RFLHDNLVLCARKLASL--------LPDPLSVCFFVNSGSEANDLALRLARVHTN 74 (83)
Q Consensus 7 h~~p~i~~a~~~~~~~~~~--~~--~~~~~~~~~la~~l~~~--------~p~~~~~v~f~~sGseA~e~Alk~ar~~~~ 74 (83)
..+|++.+++.++++.... +. ....+....+++.+.+. .+.+.+.|+++++|++|++.+++.... .|
T Consensus 50 ~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~-~g 128 (416)
T 1bw0_A 50 LTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICD-AG 128 (416)
T ss_dssp CCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCC-TT
T ss_pred CCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCC-CC
Confidence 3578999999999876311 11 11223345566665521 112356899999999999999997621 23
Q ss_pred CCceEEe
Q psy6206 75 NDDVITQ 81 (83)
Q Consensus 75 r~~ii~~ 81 (83)
.+|+..
T Consensus 129 -d~vl~~ 134 (416)
T 1bw0_A 129 -DYALVP 134 (416)
T ss_dssp -CEEEEE
T ss_pred -CEEEEc
Confidence 356554
No 133
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=97.31 E-value=0.00015 Score=47.25 Aligned_cols=69 Identities=14% Similarity=0.099 Sum_probs=44.5
Q ss_pred CHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCC-eEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 9 HPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLS-VCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 9 ~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~-~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
+|++.+++.+++.. +. ...+.+...++.+.|.+..+.+.. .++|+++|++|++.+++.. .....+||..
T Consensus 35 ~~~v~~a~~~~~~~-~~-~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~--~~~gd~vl~~ 104 (393)
T 3kgw_A 35 APRVLAAGSLRMIG-HM-QKEMLQIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNL--LEPGDSFLTG 104 (393)
T ss_dssp CHHHHHHTTCCCCC-TT-SHHHHHHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHH--CCTTCEEEEE
T ss_pred CHHHHHHhcccccC-cc-cHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhc--CCCCCEEEEE
Confidence 67777777664311 11 111234556788888888764433 5999999999999999976 3334455543
No 134
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=97.31 E-value=0.00098 Score=45.73 Aligned_cols=67 Identities=15% Similarity=0.068 Sum_probs=45.7
Q ss_pred CCCHHHHHHHHHHHHhh-cc-C---CCCc--chHHHHHHHHHHhhCCCCC--CeE--EeeCChHHHHHHHHHHHHhhc
Q psy6206 7 HCHPAVVKAACTQLALL-NT-N---NRFL--HDNLVLCARKLASLLPDPL--SVC--FFVNSGSEANDLALRLARVHT 73 (83)
Q Consensus 7 h~~p~i~~a~~~~~~~~-~~-~---~~~~--~~~~~~la~~l~~~~p~~~--~~v--~f~~sGseA~e~Alk~ar~~~ 73 (83)
|.++.+.+++.+++... .. . ..++ .+...++.+.+.+..+.+. +.+ +|+++|+||++.+++.++...
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g 184 (514)
T 3mad_A 107 HGDEHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWA 184 (514)
T ss_dssp CCCHHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHh
Confidence 45688888888877654 11 1 1121 1223556677788775432 466 999999999999999998765
No 135
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=97.29 E-value=0.00074 Score=44.90 Aligned_cols=63 Identities=10% Similarity=-0.009 Sum_probs=41.5
Q ss_pred CCHHHHHHHHHHHHhhc-c-CCC--CcchHHHHHHHHHHhhC--CCCCCeEEeeCChHHHHHHHHHHHH
Q psy6206 8 CHPAVVKAACTQLALLN-T-NNR--FLHDNLVLCARKLASLL--PDPLSVCFFVNSGSEANDLALRLAR 70 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~-~-~~~--~~~~~~~~la~~l~~~~--p~~~~~v~f~~sGseA~e~Alk~ar 70 (83)
.+|++.+++.++++... . +.. ...+....+++.+.... +...+.++|+++|++|++.+++...
T Consensus 58 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~ 126 (437)
T 3g0t_A 58 APQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVAN 126 (437)
T ss_dssp CCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHh
Confidence 57999999999887521 1 111 11233455555555432 1235689999999999999999765
No 136
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=97.29 E-value=0.0011 Score=43.92 Aligned_cols=71 Identities=10% Similarity=-0.021 Sum_probs=45.0
Q ss_pred CCHHHHHHHHHHHHhhc--cCC-CCcchHHHHHHHHHHhhCC--CCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 8 CHPAVVKAACTQLALLN--TNN-RFLHDNLVLCARKLASLLP--DPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~--~~~-~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.+|.+.+++ ++++... ... ....+....+++.+....+ .+.+.++++++|++|++.+++... ....+|+..
T Consensus 57 ~~~~v~~a~-~~l~~~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~--~~gd~Vl~~ 132 (409)
T 2gb3_A 57 TPEVFFERI-YENKPEVVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIA--NPGDEILVL 132 (409)
T ss_dssp CCTHHHHHH-HHTCCSSCCCCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHC--CTTCEEEEE
T ss_pred CCHHHHHHH-HHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhC--CCCCEEEEc
Confidence 367899999 8876531 111 1123445666666665332 234689999999999999999762 223456654
No 137
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=97.27 E-value=0.0019 Score=43.56 Aligned_cols=72 Identities=13% Similarity=-0.014 Sum_probs=47.1
Q ss_pred CCHHHHHHHHHHHHh--hc-cCCC-CcchHHHHHHHHHHhhCCC--CCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 8 CHPAVVKAACTQLAL--LN-TNNR-FLHDNLVLCARKLASLLPD--PLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~--~~-~~~~-~~~~~~~~la~~l~~~~p~--~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.+|.+.+++.++++. .. .... ...+....+++.+.+..+. +.+.|+++++|+||++.+++.... .| .+||..
T Consensus 71 ~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~~-~g-d~Vlv~ 148 (447)
T 3b46_A 71 PPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLN-AG-DEVIVF 148 (447)
T ss_dssp CCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHHHHHHHHCC-TT-CEEEEE
T ss_pred CCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHHcC-CC-CEEEEe
Confidence 468999999998875 21 1111 1234456677777665432 235899999999999999997632 23 356654
No 138
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=97.27 E-value=8.5e-05 Score=48.34 Aligned_cols=68 Identities=12% Similarity=0.144 Sum_probs=45.0
Q ss_pred CHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCC--CeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 9 HPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPL--SVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 9 ~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~--~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
+|++.+++.+++... ......+...++.+.+.+..+.+. +.++|+++|++|++ +++.. .....+||..
T Consensus 14 ~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~-~~~~~--~~~gd~vi~~ 83 (384)
T 3zrp_A 14 KEDVLVAGLENNVGF--TSKEFVEALAYSLKGLRYVMGASKNYQPLIIPGGGTSAME-SVTSL--LKPNDKILVV 83 (384)
T ss_dssp CHHHHHHTTCCSCCT--TSHHHHHHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHH-HGGGG--CCTTCEEEEE
T ss_pred CHHHHHHhhcccccc--ccHHHHHHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHH-HHHhh--cCCCCEEEEe
Confidence 677877776654321 111223455778888888876544 78999999999999 88643 3344466654
No 139
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=97.26 E-value=0.00046 Score=44.78 Aligned_cols=73 Identities=22% Similarity=0.187 Sum_probs=48.4
Q ss_pred CCCC-CHHHHHHHHHHHHhh--c-cCCCCc-chHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceE
Q psy6206 5 VGHC-HPAVVKAACTQLALL--N-TNNRFL-HDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVI 79 (83)
Q Consensus 5 lGh~-~p~i~~a~~~~~~~~--~-~~~~~~-~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii 79 (83)
+|.+ ||.+.+++.++++.. . ....+. .+...+|.+.|.+..+. +...|.+||++|++.+++......++..||
T Consensus 15 l~~~~~p~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~~~--~~~i~~~~G~~a~~~al~~~~~~gd~~~vi 92 (357)
T 3lws_A 15 QISGHGKRNVGVLKTAFAAVADEMASDQYGTGAIIEPFEQKFADVLGM--DDAVFFPSGTMAQQVALRIWSDETDNRTVA 92 (357)
T ss_dssp ESSBSSCCBHHHHHHHHTTSCTTCBCEETTEETTHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHHHHHHTCCEEE
T ss_pred cccCCCCCCHHHHHHHHHHhhcccCcccccCChHHHHHHHHHHHHhCC--CcEEEecCcHHHHHHHHHHHhhcCCCcEEE
Confidence 4553 577888887777652 1 112232 35567888888888753 456677999999999999776654433454
No 140
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=97.20 E-value=0.0026 Score=42.04 Aligned_cols=72 Identities=10% Similarity=-0.047 Sum_probs=46.4
Q ss_pred CCHHHHHHHHHHHHhhc-cCCC--CcchHHHHHHHHHHhhC--CCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 8 CHPAVVKAACTQLALLN-TNNR--FLHDNLVLCARKLASLL--PDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~-~~~~--~~~~~~~~la~~l~~~~--p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.+|++.+++.++++... .+.. ...+....+++.+.+.. +.+.+.++++++|++|++.+++... ....+|+..
T Consensus 55 ~~~~v~~a~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~--~~gd~Vl~~ 131 (406)
T 1xi9_A 55 PPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALL--DPGDEILVP 131 (406)
T ss_dssp CCHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHC--CTTCEEEEE
T ss_pred CCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhC--CCCCEEEEc
Confidence 36899999999887642 1111 12344456666665432 3345689999999999999999762 223456654
No 141
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=97.16 E-value=0.0035 Score=42.45 Aligned_cols=73 Identities=10% Similarity=-0.046 Sum_probs=45.1
Q ss_pred CCCHHHHHHHHHHHHhh-----ccCC-CCcchHHHHHHHHHHhhCCC-CCCeEEeeCChHHHHHHHHHHHHhhcCCCceE
Q psy6206 7 HCHPAVVKAACTQLALL-----NTNN-RFLHDNLVLCARKLASLLPD-PLSVCFFVNSGSEANDLALRLARVHTNNDDVI 79 (83)
Q Consensus 7 h~~p~i~~a~~~~~~~~-----~~~~-~~~~~~~~~la~~l~~~~p~-~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii 79 (83)
+.+|++.+++.++++.. .+.. ....+....+++.+.+..+. +.+.|+++++|++|++.+++.... .| ..|+
T Consensus 91 ~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l~~-~G-d~Vl 168 (448)
T 3aow_A 91 FPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLN-PG-DIVV 168 (448)
T ss_dssp SCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHHCC-TT-CEEE
T ss_pred CCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHHcC-CC-CEEE
Confidence 45678999999988753 1111 11223344555555333232 467999999999999999997522 23 3565
Q ss_pred Ee
Q psy6206 80 TQ 81 (83)
Q Consensus 80 ~~ 81 (83)
..
T Consensus 169 v~ 170 (448)
T 3aow_A 169 VE 170 (448)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 142
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=97.15 E-value=0.0013 Score=43.35 Aligned_cols=72 Identities=19% Similarity=0.221 Sum_probs=43.7
Q ss_pred CCCCHHHHHHHHHHHHhhc-c---CCCC-----cchHHHHHH-HHHHhhCCCCCCeE-EeeCChHHHHHHHHHHHHhhcC
Q psy6206 6 GHCHPAVVKAACTQLALLN-T---NNRF-----LHDNLVLCA-RKLASLLPDPLSVC-FFVNSGSEANDLALRLARVHTN 74 (83)
Q Consensus 6 Gh~~p~i~~a~~~~~~~~~-~---~~~~-----~~~~~~~la-~~l~~~~p~~~~~v-~f~~sGseA~e~Alk~ar~~~~ 74 (83)
.+.+|+|++++.+++.... . ...+ ..+...+++ +.+.+..+ .+.+ ++++||++|++.+++.. ...
T Consensus 42 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~~~v~~~~Gs~a~~~al~~~--~~~ 117 (425)
T 3ecd_A 42 NIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFN--AGHANVQPHSGAQANGAVMLAL--AKP 117 (425)
T ss_dssp CCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHT--CSEEECCCSSHHHHHHHHHHHH--CCT
T ss_pred CCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhC--CCCceeecCchHHHHHHHHHHc--cCC
Confidence 4558999999999885321 0 0111 112445555 55666664 3445 45999999999999976 333
Q ss_pred CCceEEe
Q psy6206 75 NDDVITQ 81 (83)
Q Consensus 75 r~~ii~~ 81 (83)
..+||+.
T Consensus 118 gd~Vi~~ 124 (425)
T 3ecd_A 118 GDTVLGM 124 (425)
T ss_dssp TCEEEEE
T ss_pred CCEEEEc
Confidence 3456554
No 143
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=97.15 E-value=0.00032 Score=45.97 Aligned_cols=69 Identities=13% Similarity=0.056 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCC-eEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 9 HPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLS-VCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 9 ~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~-~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
+|++.+++.+++.. + .+..+.+...++.+.|.+.++.+.+ .++++++|+||++.+++... ....+|+..
T Consensus 30 ~~~v~~a~~~~~~~-~-~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~--~~gd~vl~~ 99 (396)
T 2ch1_A 30 SKRVLTAMTNTVLS-N-FHAELFRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLL--EEGDRVLIA 99 (396)
T ss_dssp CHHHHHHTTSCCCC-T-TCHHHHHHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHC--CTTCEEEEE
T ss_pred CHHHHHHhcccccc-C-CChhHHHHHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhc--CCCCeEEEE
Confidence 46677766554321 0 1111223467888888888866555 79999999999999998762 223356654
No 144
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=97.14 E-value=0.00076 Score=44.44 Aligned_cols=64 Identities=20% Similarity=0.080 Sum_probs=39.0
Q ss_pred CCCCCHHHHHHHHHHHHhhc---c-C-----CCCcchHHHHHH-HHHHhhCCCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 5 VGHCHPAVVKAACTQLALLN---T-N-----NRFLHDNLVLCA-RKLASLLPDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 5 lGh~~p~i~~a~~~~~~~~~---~-~-----~~~~~~~~~~la-~~l~~~~p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
-.|.+|+|++++.+++.... . . .....+...+++ +.+.+..+.+.+.+ +.+||++|++.+++..
T Consensus 39 ~n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~v-~~~sGs~a~~~a~~~~ 112 (420)
T 3gbx_A 39 ENYTSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGADYANV-QPHSGSQANFAVYTAL 112 (420)
T ss_dssp CCCCCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHTCSEEEC-CCSSHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhCCCCcee-EecCcHHHHHHHHHHh
Confidence 34679999999999885421 1 0 111123344444 56667665433333 4588999999999865
No 145
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=97.14 E-value=0.0017 Score=43.00 Aligned_cols=51 Identities=20% Similarity=0.154 Sum_probs=38.1
Q ss_pred CCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 27 NRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 27 ~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
+.++++...++.+.+.+..+. +.+++++||++|++.+++... ....+||..
T Consensus 59 ~~~~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~l~~~~--~~gd~vi~~ 109 (398)
T 2rfv_A 59 TRLGNPTTDALEKKLAVLERG--EAGLATASGISAITTTLLTLC--QQGDHIVSA 109 (398)
T ss_dssp TTTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHC--CTTCEEEEE
T ss_pred eCCCChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHh--CCCCEEEEc
Confidence 445677788999999998854 378888999999999999763 223456654
No 146
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=97.14 E-value=0.0021 Score=42.50 Aligned_cols=72 Identities=15% Similarity=-0.044 Sum_probs=46.1
Q ss_pred CCHHHHHHHHHHHHhhc----cCCC-CcchHHHHHHHHHHhhCCC--CC-CeEEeeCChHHHHHHHHHHHHhhcCCCceE
Q psy6206 8 CHPAVVKAACTQLALLN----TNNR-FLHDNLVLCARKLASLLPD--PL-SVCFFVNSGSEANDLALRLARVHTNNDDVI 79 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~----~~~~-~~~~~~~~la~~l~~~~p~--~~-~~v~f~~sGseA~e~Alk~ar~~~~r~~ii 79 (83)
.+|.+.+++.++++... +... ...+....+++.+.+..+. .. +.|+|+++|++|++.+++... ....+|+
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~--~~gd~vl 119 (422)
T 3fvs_A 42 PPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALV--DEGDEVI 119 (422)
T ss_dssp CCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHC--CTTCEEE
T ss_pred CCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHc--CCCCEEE
Confidence 36889999999887621 1111 1234456677776654332 22 489999999999999999762 2333565
Q ss_pred Ee
Q psy6206 80 TQ 81 (83)
Q Consensus 80 ~~ 81 (83)
..
T Consensus 120 ~~ 121 (422)
T 3fvs_A 120 II 121 (422)
T ss_dssp EE
T ss_pred Ec
Confidence 53
No 147
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=97.14 E-value=0.003 Score=43.16 Aligned_cols=63 Identities=19% Similarity=0.096 Sum_probs=39.5
Q ss_pred CHHHHHHHHHHHHhhccCCCCc----chHHHHHHHHHHhhCCCC-CCeEEeeCChHHHHHHHHHHHHh
Q psy6206 9 HPAVVKAACTQLALLNTNNRFL----HDNLVLCARKLASLLPDP-LSVCFFVNSGSEANDLALRLARV 71 (83)
Q Consensus 9 ~p~i~~a~~~~~~~~~~~~~~~----~~~~~~la~~l~~~~p~~-~~~v~f~~sGseA~e~Alk~ar~ 71 (83)
.|.+++++...+.......... .+...++.+.|.+.++.+ .+.+.|+++||||+..|++.+|.
T Consensus 113 ~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~ 180 (497)
T 2qma_A 113 MPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARD 180 (497)
T ss_dssp HHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHH
Confidence 4667666655443221111111 122344566688887532 36899999999999999999875
No 148
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=97.13 E-value=0.00024 Score=48.01 Aligned_cols=79 Identities=6% Similarity=-0.118 Sum_probs=52.8
Q ss_pred cCCCCCCHHHHHHHHHHHHhhc-c--CC---C--CcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh-c
Q psy6206 3 LPVGHCHPAVVKAACTQLALLN-T--NN---R--FLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH-T 73 (83)
Q Consensus 3 ~~lGh~~p~i~~a~~~~~~~~~-~--~~---~--~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~-~ 73 (83)
+++|..++.+.+++.++++... . .. . ...+...++.+.+.+..+.+.+.|+|+++++++++.+++..... .
T Consensus 74 ~~~g~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~ 153 (465)
T 3e9k_A 74 NSLGLQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTP 153 (465)
T ss_dssp TTSCCEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCS
T ss_pred CccCCChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccC
Confidence 4567777888888888776531 1 10 1 11233356778888877655679999999999999999866332 2
Q ss_pred CCCceEEe
Q psy6206 74 NNDDVITQ 81 (83)
Q Consensus 74 ~r~~ii~~ 81 (83)
.+.+||+.
T Consensus 154 ~~~~Vl~~ 161 (465)
T 3e9k_A 154 KRYKILLE 161 (465)
T ss_dssp SSCEEEEE
T ss_pred CCCEEEEc
Confidence 34557654
No 149
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=97.12 E-value=0.00096 Score=44.00 Aligned_cols=47 Identities=13% Similarity=0.140 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEec
Q psy6206 32 DNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQD 82 (83)
Q Consensus 32 ~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~ 82 (83)
+...++++++.+.++.+ +.++|++||++|++.+++.. ..+.+||+++
T Consensus 35 ~~~~~~~~~l~~~~~~~-~~v~~~~sgt~a~~~~~~~~---~~gd~vi~~~ 81 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYNAE-AAVIIPGSGTYGMEAVARQL---TIDEDCLIIR 81 (379)
T ss_dssp HHHHHHHHHHHHHHTCS-EEEEEESCHHHHHHHHHHHH---CTTCEEEEEE
T ss_pred HHHHHHHHHHHHHhCCC-CEEEEcCChhHHHHHHHHhC---CCCCeEEEEe
Confidence 34566777788877654 68999999999999998654 3445777654
No 150
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=97.12 E-value=0.0006 Score=44.38 Aligned_cols=76 Identities=11% Similarity=0.081 Sum_probs=45.4
Q ss_pred ccCCCCC----CHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCC--CCeEEeeCChHHHHHHHHHHHHhhcCC
Q psy6206 2 SLPVGHC----HPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDP--LSVCFFVNSGSEANDLALRLARVHTNN 75 (83)
Q Consensus 2 ~~~lGh~----~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~--~~~v~f~~sGseA~e~Alk~ar~~~~r 75 (83)
+.+++.+ +|++.+++.+++.. +. .....+...++.+.+.+..+.+ .+.+++++||++|++.+++.... .|
T Consensus 20 ~~~~~pgp~~~~~~v~~a~~~~~~~-~~-~~~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~-~g- 95 (376)
T 3f0h_A 20 MLNFTVGPVMSSEEVRAIGAEQVPY-FR-TTEFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFT-KK- 95 (376)
T ss_dssp CEECSSSSCCCCHHHHHHHTSCCCC-CS-SHHHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCC-TT-
T ss_pred ceeecCCCCCCcHHHHHHhcCCCCC-CC-CHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccC-CC-
Confidence 4456665 57777777665421 11 1111244567777887775432 24566689999999999987642 23
Q ss_pred CceEEe
Q psy6206 76 DDVITQ 81 (83)
Q Consensus 76 ~~ii~~ 81 (83)
.+||..
T Consensus 96 d~vi~~ 101 (376)
T 3f0h_A 96 DKVLVI 101 (376)
T ss_dssp CCEEEE
T ss_pred CeEEEE
Confidence 345543
No 151
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=97.11 E-value=0.00062 Score=43.98 Aligned_cols=61 Identities=11% Similarity=-0.031 Sum_probs=41.0
Q ss_pred CCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCC---CCCCeEEeeCChHHHHHHHHHHH
Q psy6206 8 CHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLP---DPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p---~~~~~v~f~~sGseA~e~Alk~a 69 (83)
.+|++.+++.+++..... ..++.....++.+.|.+..+ .+.+.|+|+++|+|+++.+++..
T Consensus 33 ~~~~v~~a~~~~~~~~~~-~~y~~~~~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~~~~ 96 (335)
T 1uu1_A 33 FPEDLVDEVFRRLNSDAL-RIYYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF 96 (335)
T ss_dssp CCHHHHHHHHHTCCGGGG-GSCCCSSCHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHhhhhhh-hcCCCCchHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHHHHh
Confidence 579999999988732111 12222223456666666554 34568999999999999999875
No 152
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=97.08 E-value=0.003 Score=41.96 Aligned_cols=70 Identities=19% Similarity=0.063 Sum_probs=48.2
Q ss_pred CHHHHHHHHHHHHhhccC--C--CCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 9 HPAVVKAACTQLALLNTN--N--RFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 9 ~p~i~~a~~~~~~~~~~~--~--~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
+|++.+++.++++..... . ....+...++.+.+.+..+. +.++|++||++|++.+++..+.-.| .+||..
T Consensus 15 ~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~--~~~i~~~~gt~al~~~~~~~~~~~g-d~Vl~~ 88 (418)
T 2c81_A 15 SDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGV--PYCVPTTSGSTALMLALEALGIGEG-DEVIVP 88 (418)
T ss_dssp CHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHTTCCTT-CEEEEE
T ss_pred CHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHcCCCCc-CEEEEC
Confidence 589999999998764211 1 11123467888888888743 3788899999999999997643234 356553
No 153
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=97.04 E-value=0.00011 Score=47.17 Aligned_cols=68 Identities=18% Similarity=0.051 Sum_probs=46.1
Q ss_pred CCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCC--CCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 8 CHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDP--LSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~--~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.+|++.+++.++++. +. .....+...++.+.|.+..+.+ .+.++|+++|++|++.+++.... .+|+..
T Consensus 11 ~~~~v~~a~~~~~~~-~~-~~~~~~~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~----d~vl~~ 80 (353)
T 2yrr_A 11 IPERVQKALLRPMRG-HL-DPEVLRVNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR----GPVLVL 80 (353)
T ss_dssp CCHHHHGGGGSCCCC-TT-CHHHHHHHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC----CCEEEE
T ss_pred CCHHHHHHHhccccc-cc-CHHHHHHHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC----CcEEEE
Confidence 468888888776643 11 1111234678888888887543 46899999999999999986543 356553
No 154
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=96.09 E-value=9.8e-05 Score=48.75 Aligned_cols=61 Identities=16% Similarity=-0.040 Sum_probs=39.8
Q ss_pred CHHHHHHHHHHHHhh-ccCCCCcchHHHHHHHHHHhhCC--CCCCeEEeeCChHHHHHHHHHHH
Q psy6206 9 HPAVVKAACTQLALL-NTNNRFLHDNLVLCARKLASLLP--DPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 9 ~p~i~~a~~~~~~~~-~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~Alk~a 69 (83)
+|++.+++.++++.. ..+.....+....+++.+.+..+ .+.+.|+++++|+||++.+++..
T Consensus 46 ~~~v~~a~~~~~~~~~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~ 109 (392)
T 3b1d_A 46 MPEVKQAIHDYAEQLVYGYTYASDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAF 109 (392)
Confidence 578999999988653 11111122333445555544333 33568999999999999999976
No 155
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=97.00 E-value=0.0027 Score=42.53 Aligned_cols=71 Identities=11% Similarity=-0.015 Sum_probs=45.2
Q ss_pred CCHHHHHHHHHHHHhhc---cCCCCcc-hHHHHHHHHHHhhC----CCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceE
Q psy6206 8 CHPAVVKAACTQLALLN---TNNRFLH-DNLVLCARKLASLL----PDPLSVCFFVNSGSEANDLALRLARVHTNNDDVI 79 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~---~~~~~~~-~~~~~la~~l~~~~----p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii 79 (83)
.+|+|.+++.++++.+. ....+.. +...+|.+.+.+.. +...+.++|+++|+++++.+..+. .....|+
T Consensus 83 ~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~g~~~~~~~i~~t~G~~~al~~~~~l~---~~gd~Vl 159 (449)
T 3qgu_A 83 LPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFYGHAGRAADEIFISDGSKCDIARIQMMF---GSKPTVA 159 (449)
T ss_dssp CCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHHHHHH---CSSSCEE
T ss_pred CCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHHcCCCCCHHHEEEccCHHHHHHHHHHHh---CCCCEEE
Confidence 46899999999998652 1122322 22356666666654 444569999999999999873332 2334565
Q ss_pred Ee
Q psy6206 80 TQ 81 (83)
Q Consensus 80 ~~ 81 (83)
..
T Consensus 160 ~~ 161 (449)
T 3qgu_A 160 VQ 161 (449)
T ss_dssp EE
T ss_pred Ec
Confidence 53
No 156
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=96.98 E-value=0.00084 Score=44.45 Aligned_cols=73 Identities=12% Similarity=-0.071 Sum_probs=43.1
Q ss_pred CHHHHHHHHH-HHHhh--ccC--CCCcchHHHHHHHHHHhhCC--CCCCeEEe--eCChHHHHHHHHHHHHhhcCCCceE
Q psy6206 9 HPAVVKAACT-QLALL--NTN--NRFLHDNLVLCARKLASLLP--DPLSVCFF--VNSGSEANDLALRLARVHTNNDDVI 79 (83)
Q Consensus 9 ~p~i~~a~~~-~~~~~--~~~--~~~~~~~~~~la~~l~~~~p--~~~~~v~f--~~sGseA~e~Alk~ar~~~~r~~ii 79 (83)
.|.+.+++.+ +++.. +.+ .....+....+++.+....+ -..++|+| +++|++|++.++++.+.+....+|+
T Consensus 49 ~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl 128 (412)
T 1yaa_A 49 LPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVY 128 (412)
T ss_dssp CHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEE
T ss_pred cHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEE
Confidence 4788888888 76531 111 11112233444444433211 02458999 9999999999988877665444566
Q ss_pred Ee
Q psy6206 80 TQ 81 (83)
Q Consensus 80 ~~ 81 (83)
..
T Consensus 129 ~~ 130 (412)
T 1yaa_A 129 LS 130 (412)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 157
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=96.96 E-value=0.002 Score=43.47 Aligned_cols=72 Identities=18% Similarity=0.174 Sum_probs=45.6
Q ss_pred CCCCHHHHHHHHHHHHhh-cc---CCCCc--c---hHHHHHH-HHHHhhCCCCCCeEEe-eCChHHHHHHHHHHHHhhcC
Q psy6206 6 GHCHPAVVKAACTQLALL-NT---NNRFL--H---DNLVLCA-RKLASLLPDPLSVCFF-VNSGSEANDLALRLARVHTN 74 (83)
Q Consensus 6 Gh~~p~i~~a~~~~~~~~-~~---~~~~~--~---~~~~~la-~~l~~~~p~~~~~v~f-~~sGseA~e~Alk~ar~~~~ 74 (83)
.+.+|+|++++.+++... .. ...+. . +...+++ +++.+.++. +.+.+ ++||++|++.+++..+.. |
T Consensus 55 ~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~--~~~~v~~~sGs~a~~~a~~~~~~~-G 131 (447)
T 3h7f_A 55 NFVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGA--EFANVQPHSGAQANAAVLHALMSP-G 131 (447)
T ss_dssp CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC--SEEECCCSSHHHHHHHHHHHHCCT-T
T ss_pred CCCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCC--CceEEEeCCHHHHHHHHHHHhcCC-C
Confidence 345899999998887532 11 11111 1 2335566 888888743 45666 899999999999976542 3
Q ss_pred CCceEEe
Q psy6206 75 NDDVITQ 81 (83)
Q Consensus 75 r~~ii~~ 81 (83)
. +|++.
T Consensus 132 d-~Vl~~ 137 (447)
T 3h7f_A 132 E-RLLGL 137 (447)
T ss_dssp C-EEEEE
T ss_pred C-EEEec
Confidence 3 45543
No 158
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=96.95 E-value=0.003 Score=42.61 Aligned_cols=65 Identities=17% Similarity=0.015 Sum_probs=44.0
Q ss_pred CCCHHHHHHHHHHHHhhc-cCCCCc--chHHHHHHHHHHhhCCCCCC-----eEEeeCChHHHHHHHHHHHHh
Q psy6206 7 HCHPAVVKAACTQLALLN-TNNRFL--HDNLVLCARKLASLLPDPLS-----VCFFVNSGSEANDLALRLARV 71 (83)
Q Consensus 7 h~~p~i~~a~~~~~~~~~-~~~~~~--~~~~~~la~~l~~~~p~~~~-----~v~f~~sGseA~e~Alk~ar~ 71 (83)
+.+|.+.+++.+.++.-. ....++ .+...++.+.+.+.++.+.+ .+.|+++|+||+..++..++.
T Consensus 53 ~~~~~v~e~~~~a~~~~~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~ 125 (452)
T 2dgk_A 53 WDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKW 125 (452)
T ss_dssp CCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHhccCCCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHH
Confidence 456888888887775421 111222 23345677777888754433 489999999999999998764
No 159
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=96.95 E-value=0.0023 Score=42.29 Aligned_cols=67 Identities=19% Similarity=0.124 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 10 PAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 10 p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
|++.+++.+.++...... ..+...++.+.|.+... .+.++|++||++|++.+++..+.-.| .+|+..
T Consensus 12 ~~v~~a~~~~~~~~~~~~--~g~~~~~l~~~la~~~~--~~~v~~~~ggt~al~~~~~~l~~~~g-d~Vl~~ 78 (394)
T 1o69_A 12 GNELKYIEEVFKSNYIAP--LGEFVNRFEQSVKDYSK--SENALALNSATAALHLALRVAGVKQD-DIVLAS 78 (394)
T ss_dssp CCHHHHHHHHHHHTTTSC--TTHHHHHHHHHHHHHHC--CSEEEEESCHHHHHHHHHHHTTCCTT-CEEEEE
T ss_pred HHHHHHHHHHHHcCCccC--CChHHHHHHHHHHHHhC--CCcEEEeCCHHHHHHHHHHHcCCCCC-CEEEEC
Confidence 567777777775521111 12456788888888874 36899999999999999997642223 355543
No 160
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=96.91 E-value=0.00024 Score=45.81 Aligned_cols=70 Identities=16% Similarity=0.113 Sum_probs=44.2
Q ss_pred CCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCC--CCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 8 CHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPD--PLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~--~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.+|+|.+++.+++. +....+.++...++.+.|.+.++. +.+.++|+++|++|++.+++..+. .|. +||..
T Consensus 15 ~~~~v~~a~~~~~~--~~~~~~~~~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~-~gd-~vi~~ 86 (366)
T 1m32_A 15 TSRTVKEAMLFDSC--TWDDDYNIGVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALG-PQD-KVLIV 86 (366)
T ss_dssp CCHHHHHTTCCCCC--TTSHHHHTTTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCC-TTC-CEEEE
T ss_pred CCHHHHHHHhhhhc--CCCHHHHHHHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcC-CCC-eEEEE
Confidence 57889998877532 111111113456677777776652 234799999999999999997642 333 45443
No 161
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=96.78 E-value=0.0037 Score=41.31 Aligned_cols=60 Identities=13% Similarity=-0.037 Sum_probs=36.7
Q ss_pred HHHHHHHHHHHHhh--cc-CCCCcchHHHHHHHHHHhhC-CCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 10 PAVVKAACTQLALL--NT-NNRFLHDNLVLCARKLASLL-PDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 10 p~i~~a~~~~~~~~--~~-~~~~~~~~~~~la~~l~~~~-p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
|.+.+++.+..... .+ ......+....+++.+.... |.+.+.++++++|++|++.+++..
T Consensus 58 ~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~~ 121 (413)
T 3t18_A 58 PSVYDRLDEMDRSHIASYAPIEGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIRSAIFSY 121 (413)
T ss_dssp HHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcccccCcCCCCCCHHHHHHHHHHHhcccCccccCcEEEcCccHHHHHHHHHHh
Confidence 46777765533221 11 11122344566777665543 333448999999999999999854
No 162
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=96.77 E-value=0.0039 Score=41.40 Aligned_cols=52 Identities=23% Similarity=0.195 Sum_probs=37.1
Q ss_pred CCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 26 NNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 26 ~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.+.+.++...++.+.+.+..+. +.+++++||++|++.+++... ....+||+.
T Consensus 59 ~~r~~~~~~~~l~~~la~~~g~--~~~i~~~sG~~a~~~~l~~~~--~~gd~vl~~ 110 (398)
T 1gc0_A 59 YSRISNPTLNLLEARMASLEGG--EAGLALASGMGAITSTLWTLL--RPGDEVLLG 110 (398)
T ss_dssp ----CCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHC--CTTCEEEEE
T ss_pred ccCCCChHHHHHHHHHHHHhCC--CcEEEECCHHHHHHHHHHHHh--cCCCEEEEe
Confidence 3455677888999999998864 378889999999999999762 223456654
No 163
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=96.76 E-value=0.0077 Score=39.75 Aligned_cols=71 Identities=17% Similarity=0.085 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHHHhhcc---CCCCc-chHHHHHHHHHHhhC--C-CCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 8 CHPAVVKAACTQLALLNT---NNRFL-HDNLVLCARKLASLL--P-DPLSVCFFVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~~---~~~~~-~~~~~~la~~l~~~~--p-~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
.+|.+.+++.++++.... ...+. .....+|.+.|.+.+ + ...+.|+|+++++|+++.++++. ....+|+.
T Consensus 47 ~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~~~~~~---~~gd~Vl~ 123 (400)
T 3asa_A 47 LNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFYRGFVDAKEIFISDGAKVDLFRLLSFF---GPNQTVAI 123 (400)
T ss_dssp CCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHHHHHHH---CSSCEEEE
T ss_pred CCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHcCCCCHHHEEEccChHHHHHHHHHHc---CCCCEEEE
Confidence 478999999999876421 12232 223456777777762 3 23568999999999999876543 33345665
Q ss_pred e
Q psy6206 81 Q 81 (83)
Q Consensus 81 ~ 81 (83)
.
T Consensus 124 ~ 124 (400)
T 3asa_A 124 Q 124 (400)
T ss_dssp E
T ss_pred C
Confidence 4
No 164
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=96.68 E-value=0.0072 Score=39.75 Aligned_cols=51 Identities=20% Similarity=0.147 Sum_probs=37.1
Q ss_pred CCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 27 NRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 27 ~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
+.++++...++.+.|.+..+.+ ..++.+||+||++.+++.. .....+||..
T Consensus 47 ~~~~~~~~~~l~~~la~~~~~~--~~i~~~sGt~a~~~~~~~~--~~~g~~vl~~ 97 (386)
T 1cs1_A 47 SRRGNPTRDVVQRALAELEGGA--GAVLTNTGMSAIHLVTTVF--LKPGDLLVAP 97 (386)
T ss_dssp TTTCCHHHHHHHHHHHHHHTCS--EEEEESSHHHHHHHHHHHH--CCTTCEEEEE
T ss_pred eCCCCccHHHHHHHHHHHhCCC--cEEEeCCHHHHHHHHHHHH--hCCCCEEEEe
Confidence 4556777889999999998754 4555588899999999976 2333456654
No 165
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=96.68 E-value=0.0035 Score=41.81 Aligned_cols=36 Identities=8% Similarity=-0.165 Sum_probs=25.3
Q ss_pred HHHHHHHHhhC--CCCCCeEEeeCChHHHHHHHHHHHH
Q psy6206 35 VLCARKLASLL--PDPLSVCFFVNSGSEANDLALRLAR 70 (83)
Q Consensus 35 ~~la~~l~~~~--p~~~~~v~f~~sGseA~e~Alk~ar 70 (83)
..+++.+.+.. +.+.++|+|+++|+||++.+++...
T Consensus 90 ~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~ 127 (444)
T 3if2_A 90 DALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFG 127 (444)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSS
T ss_pred HHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHh
Confidence 44444443321 3345799999999999999998753
No 166
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=96.60 E-value=0.0021 Score=42.33 Aligned_cols=63 Identities=19% Similarity=0.133 Sum_probs=38.6
Q ss_pred CCCCHHHHHHHHHHHHhhc---cCC-C-Cc-c----hHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 6 GHCHPAVVKAACTQLALLN---TNN-R-FL-H----DNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 6 Gh~~p~i~~a~~~~~~~~~---~~~-~-~~-~----~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
.+.+|+|++++.+++.... ... . +. . +....+.+.+.+..+.+.+.+ +.+||++|++.+++..
T Consensus 35 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~i-~~~sGt~a~~~~~~~~ 107 (417)
T 3n0l_A 35 NFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFNCKFANV-QPNSGSQANQGVYAAL 107 (417)
T ss_dssp CCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCSEEEC-CCSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhCCCCcce-EeccHHHHHHHHHHHh
Confidence 4558999999998884421 110 1 11 1 222234556777775433334 5588899999999976
No 167
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=96.56 E-value=0.0069 Score=40.84 Aligned_cols=52 Identities=15% Similarity=0.152 Sum_probs=39.4
Q ss_pred CCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 26 NNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 26 ~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
++.+.++...+|.++|.+..+ .+.+++++||++|++.+++.... .| .+||+.
T Consensus 75 y~r~~~p~~~~l~~~la~~~g--~~~~~~~~sG~~Ai~~al~~l~~-~G-d~Vi~~ 126 (414)
T 3ndn_A 75 YSRYGNPTVSVFEERLRLIEG--APAAFATASGMAAVFTSLGALLG-AG-DRLVAA 126 (414)
T ss_dssp BTTTCCHHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHTTCC-TT-CEEEEE
T ss_pred cCCCCChHHHHHHHHHHHHHC--CCcEEEECCHHHHHHHHHHHHhC-CC-CEEEEc
Confidence 455677888999999999874 46899999999999999985522 23 356654
No 168
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=96.56 E-value=0.016 Score=38.87 Aligned_cols=53 Identities=21% Similarity=0.310 Sum_probs=39.2
Q ss_pred CCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEec
Q psy6206 26 NNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQD 82 (83)
Q Consensus 26 ~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~ 82 (83)
.+.+.++...++.++|.+..+. +..++.+||++|++.+++.. .....+||+..
T Consensus 52 y~~~~~~~~~~l~~~la~~~g~--~~~v~~~sGt~A~~~~l~~~--~~~gd~vi~~~ 104 (421)
T 2ctz_A 52 YSRIMNPTVDVLEKRLAALEGG--KAALATASGHAAQFLALTTL--AQAGDNIVSTP 104 (421)
T ss_dssp CBTTBCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHH--CCTTCEEEECS
T ss_pred ccCCCChHHHHHHHHHHHHhCC--CceEEecCHHHHHHHHHHHH--hCCCCEEEEeC
Confidence 3445667788999999998864 36678888999999999965 33345676643
No 169
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=96.46 E-value=0.016 Score=38.42 Aligned_cols=67 Identities=7% Similarity=-0.068 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHhhccCCCCcchHHHHHHHHH-HhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 10 PAVVKAACTQLALLNTNNRFLHDNLVLCARKL-ASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 10 p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l-~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
|++.+++.+.++...... ..+...+|.+.+ .+... ..+.+.+++||++|+..+++....-.|. +||+
T Consensus 16 ~~i~~a~~~~~~~~~~~~--~~~~~~~l~~~~~a~~~g-~~~~~v~~~sgt~al~~al~~l~~~~Gd-~Vi~ 83 (377)
T 3ju7_A 16 IEYLDELKEIDASHIYTN--YGPINQRFEQTIMSGFFQ-NRGAVTTVANATLGLMAAIQLKKRKKGK-YALM 83 (377)
T ss_dssp GGGHHHHHHHHHHTCCSS--SCHHHHHHHHHHHHHTST-TCSEEEEESCHHHHHHHHHHHHSCTTCC-EEEE
T ss_pred HHHHHHHHHHHHcCCccc--CCHHHHHHHHHHHHHHhC-CCCeEEEeCCHHHHHHHHHHHcCCCCcC-EEEE
Confidence 567888888887642211 245667888999 88885 1468999999999999999865322343 4543
No 170
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=96.46 E-value=0.0035 Score=42.35 Aligned_cols=33 Identities=6% Similarity=0.021 Sum_probs=24.7
Q ss_pred CCeEEe--eCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 49 LSVCFF--VNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 49 ~~~v~f--~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.++|+| +++|++|++.+.++...+....+|+..
T Consensus 117 ~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~ 151 (448)
T 3meb_A 117 EGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMP 151 (448)
T ss_dssp TTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred cCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEEC
Confidence 368999 999999999988766655444456653
No 171
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=96.42 E-value=0.0079 Score=39.43 Aligned_cols=70 Identities=17% Similarity=0.106 Sum_probs=42.1
Q ss_pred CHHHHHHHHHHHHh-h-c-cC-CCC--cch---HHHHHH-HHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCce
Q psy6206 9 HPAVVKAACTQLAL-L-N-TN-NRF--LHD---NLVLCA-RKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDV 78 (83)
Q Consensus 9 ~p~i~~a~~~~~~~-~-~-~~-~~~--~~~---~~~~la-~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~i 78 (83)
+|++.+++.++++. . . .+ ..+ ..+ ...+++ +.+.+..+.+ ...++.+||++|++.+++.+ .....+|
T Consensus 36 ~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g~~-~~~i~~~sGt~a~~~~~~~~--~~~gd~V 112 (407)
T 2dkj_A 36 SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFGAA-WANVQPHSGSQANMAVYMAL--MEPGDTL 112 (407)
T ss_dssp CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCS-EEECCCSSHHHHHHHHHHHH--CCTTCEE
T ss_pred CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhCCC-cceEEecchHHHHHHHHHHh--cCCCCEE
Confidence 89999999998864 2 1 11 111 122 222222 4667776542 23366788999999999987 2333456
Q ss_pred EEe
Q psy6206 79 ITQ 81 (83)
Q Consensus 79 i~~ 81 (83)
+..
T Consensus 113 l~~ 115 (407)
T 2dkj_A 113 MGM 115 (407)
T ss_dssp EEE
T ss_pred EEe
Confidence 654
No 172
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=96.38 E-value=0.031 Score=37.14 Aligned_cols=71 Identities=11% Similarity=-0.011 Sum_probs=43.0
Q ss_pred CCHHHHHHHHHHHHhhcc---CCCCc-chHHHHHHHHHHhh----CCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceE
Q psy6206 8 CHPAVVKAACTQLALLNT---NNRFL-HDNLVLCARKLASL----LPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVI 79 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~~---~~~~~-~~~~~~la~~l~~~----~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii 79 (83)
.+|.|.+++.++++.... ...+. .....+|.+.+.+. .+...+.|+|+++++++++....+. .....||
T Consensus 70 ~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~l~~l~---~~gd~Vl 146 (432)
T 3ei9_A 70 IPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRLQVMF---GSNVTIA 146 (432)
T ss_dssp CCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHHHHHH---CTTCCEE
T ss_pred CCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHHHHHHc---CCCCEEE
Confidence 569999999999986421 11222 12223455555544 3444579999999999998743332 2334565
Q ss_pred Ee
Q psy6206 80 TQ 81 (83)
Q Consensus 80 ~~ 81 (83)
+.
T Consensus 147 ~~ 148 (432)
T 3ei9_A 147 VQ 148 (432)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 173
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=96.32 E-value=0.0058 Score=41.03 Aligned_cols=50 Identities=20% Similarity=0.220 Sum_probs=36.6
Q ss_pred CCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 27 NRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 27 ~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
+.+.++...+|.++|.++.+. +.+++++||++|++.+++++ ....+||+.
T Consensus 62 ~r~~~p~~~~l~~~la~l~g~--~~~~~~~sG~~Ai~~~~~l~---~~gd~Vi~~ 111 (400)
T 3nmy_A 62 SRTHNPTRFAYERCVAALEGG--TRAFAFASGMAATSTVMELL---DAGSHVVAM 111 (400)
T ss_dssp TTTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHTTS---CTTCEEEEE
T ss_pred ccCCCHHHHHHHHHHHHHhCC--CCEEEecCHHHHHHHHHHHc---CCCCEEEEe
Confidence 455678889999999998854 48899999999999865432 223356654
No 174
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=96.27 E-value=0.0031 Score=41.15 Aligned_cols=47 Identities=11% Similarity=0.036 Sum_probs=34.7
Q ss_pred HHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 34 LVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 34 ~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
..++.+.|.+..+.+.++|+++++|+|+++.+++.... .|+.+|+..
T Consensus 60 ~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~~~~-~g~d~Vl~~ 106 (356)
T 1fg7_A 60 PKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRAFCE-PGKDAILYC 106 (356)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCC-TTTCEEEEC
T ss_pred HHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHHHhC-CCCCEEEEe
Confidence 45677777777765557899999999999999986532 343567654
No 175
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=96.25 E-value=0.0038 Score=42.01 Aligned_cols=60 Identities=12% Similarity=0.027 Sum_probs=40.3
Q ss_pred CCHHHHHHHHHHHHhhcc-C-C----CC----cchHHHHHHHHHHhhCCCCC-CeEEe-eCChHHHHHHHHH
Q psy6206 8 CHPAVVKAACTQLALLNT-N-N----RF----LHDNLVLCARKLASLLPDPL-SVCFF-VNSGSEANDLALR 67 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~~-~-~----~~----~~~~~~~la~~l~~~~p~~~-~~v~f-~~sGseA~e~Alk 67 (83)
-+|+|.+++.+.+..... + + .. ..+...+..+.|.+++..+. ..|+| +.+|||+++.+++
T Consensus 24 ~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~ 95 (377)
T 3e77_A 24 LPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPL 95 (377)
T ss_dssp CCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHH
Confidence 468999999987764311 1 1 11 12344666777777775433 47888 4899999999998
No 176
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=96.24 E-value=0.0037 Score=41.76 Aligned_cols=60 Identities=10% Similarity=-0.026 Sum_probs=40.4
Q ss_pred CHHHHHHHHHHHHhhcc-C-C----CC----cchHHHHHHHHHHhhCCCC-CCeEEe-eCChHHHHHHHHHH
Q psy6206 9 HPAVVKAACTQLALLNT-N-N----RF----LHDNLVLCARKLASLLPDP-LSVCFF-VNSGSEANDLALRL 68 (83)
Q Consensus 9 ~p~i~~a~~~~~~~~~~-~-~----~~----~~~~~~~la~~l~~~~p~~-~~~v~f-~~sGseA~e~Alk~ 68 (83)
+|+|.+++.+.+..... + + .. ..+...+..+.|.+++..+ ...|+| +++|||+++.+++=
T Consensus 17 ~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~~~~ 88 (361)
T 3m5u_A 17 PLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMN 88 (361)
T ss_dssp CHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHHHHh
Confidence 68999999887754311 1 1 11 1244566777778877543 347888 99999999999983
No 177
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=96.22 E-value=0.015 Score=39.45 Aligned_cols=52 Identities=19% Similarity=0.135 Sum_probs=35.8
Q ss_pred CCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 26 NNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 26 ~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
++.+.++...+|.++|.+..+. +..++++||++|++.+++.. .....+||+.
T Consensus 76 y~r~~~p~~~~le~~lA~l~g~--~~~v~~~sG~~Ai~~al~al--~~~Gd~Vi~~ 127 (430)
T 3ri6_A 76 YSRSSNPTVEDLEQRLKNLTGA--LGVLALGSGMAAISTAILTL--ARAGDSVVTT 127 (430)
T ss_dssp ----CCHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHH--CCTTCEEEEE
T ss_pred ccCCCCHHHHHHHHHHHHHHCC--CcEEEECCHHHHHHHHHHHH--hCCCCEEEEc
Confidence 3455677888999999998853 45788889999999999855 2223456553
No 178
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=96.19 E-value=0.016 Score=37.87 Aligned_cols=73 Identities=16% Similarity=0.150 Sum_probs=43.9
Q ss_pred CCCCHHHHHHHHHHHH-hhc--cC-CC-Cc-chHHHH----HHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCC
Q psy6206 6 GHCHPAVVKAACTQLA-LLN--TN-NR-FL-HDNLVL----CARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNN 75 (83)
Q Consensus 6 Gh~~p~i~~a~~~~~~-~~~--~~-~~-~~-~~~~~~----la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r 75 (83)
++-+|++.+++.+++. ... .. +. +. .+...+ +.+.+.+..+.+ ...++.+||++|++.+++... ...
T Consensus 33 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~g~~-~~~i~~~sGt~a~~~a~~~~~--~~g 109 (405)
T 2vi8_A 33 NFVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLFGAE-HANVQPHSGAQANMAVYFTVL--EHG 109 (405)
T ss_dssp CCCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTCS-EEECCCSSHHHHHHHHHHHHC--CTT
T ss_pred ccCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCC-ceEEEecCcHHHHHHHHHHhc--CCC
Confidence 3448999999999885 321 11 11 11 122333 345777777543 234557889999999999772 233
Q ss_pred CceEEe
Q psy6206 76 DDVITQ 81 (83)
Q Consensus 76 ~~ii~~ 81 (83)
.+|+..
T Consensus 110 d~Vl~~ 115 (405)
T 2vi8_A 110 DTVLGM 115 (405)
T ss_dssp CEEEEE
T ss_pred CEEEEe
Confidence 455543
No 179
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=96.17 E-value=0.0054 Score=39.81 Aligned_cols=48 Identities=10% Similarity=0.086 Sum_probs=31.3
Q ss_pred HHHHHHHHHhhCCC----CCCeEEeeCChHHHHHHHHHHHH-hhcCCCceEEe
Q psy6206 34 LVLCARKLASLLPD----PLSVCFFVNSGSEANDLALRLAR-VHTNNDDVITQ 81 (83)
Q Consensus 34 ~~~la~~l~~~~p~----~~~~v~f~~sGseA~e~Alk~ar-~~~~r~~ii~~ 81 (83)
..++.+.+.+.+.. +.+.++|+++|+||++.+++... .+....+||..
T Consensus 40 ~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~ 92 (385)
T 2bkw_A 40 FQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVV 92 (385)
T ss_dssp HHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEE
T ss_pred HHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEE
Confidence 34555666665533 23689999999999999999764 22222355544
No 180
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=96.12 E-value=0.015 Score=39.99 Aligned_cols=39 Identities=31% Similarity=0.239 Sum_probs=31.7
Q ss_pred HHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh
Q psy6206 34 LVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH 72 (83)
Q Consensus 34 ~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~ 72 (83)
..++.+.|++.++.+.+.+.|+++||||+..|++.+|.+
T Consensus 150 e~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~ 188 (515)
T 2jis_A 150 EEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQ 188 (515)
T ss_dssp HHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHH
Confidence 455777788887654568999999999999999999853
No 181
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=96.12 E-value=0.019 Score=36.83 Aligned_cols=61 Identities=18% Similarity=0.130 Sum_probs=41.4
Q ss_pred CHHHHHHHHHHHHhhc--cCCCCc--chHHHHHHHHHHhhCCC-CCCeEEeeCChHHHHHHHHHHH
Q psy6206 9 HPAVVKAACTQLALLN--TNNRFL--HDNLVLCARKLASLLPD-PLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 9 ~p~i~~a~~~~~~~~~--~~~~~~--~~~~~~la~~l~~~~p~-~~~~v~f~~sGseA~e~Alk~a 69 (83)
+|++.+++.+.+.... .....+ .+...++.+.+.+.... +.+.+.|+++|++|++.+++..
T Consensus 16 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l 81 (362)
T 3ffr_A 16 YPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNC 81 (362)
T ss_dssp CTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhc
Confidence 5788888888776532 111111 13446677778877743 2457999999999999999854
No 182
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=96.06 E-value=0.028 Score=37.35 Aligned_cols=50 Identities=18% Similarity=0.150 Sum_probs=36.6
Q ss_pred CCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 27 NRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 27 ~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
+.++++...++.+.|.+..+. +.+++++||+||++.++++ .-.| .+||+.
T Consensus 50 ~~~~~~~~~~lr~~la~~~g~--~~~i~~~sGt~a~~~al~~--~~~g-d~Vi~~ 99 (393)
T 1n8p_A 50 SRSQNPNRENLERAVAALENA--QYGLAFSSGSATTATILQS--LPQG-SHAVSI 99 (393)
T ss_dssp TTTCCHHHHHHHHHHHHHTTC--SEEEEESCHHHHHHHHHHT--SCSS-CEEEEE
T ss_pred ecCCChhHHHHHHHHHHHhCC--CcEEEECChHHHHHHHHHH--cCCC-CEEEEe
Confidence 445667778999999999864 3788888999999999992 1223 356553
No 183
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=96.06 E-value=0.019 Score=38.29 Aligned_cols=23 Identities=9% Similarity=0.008 Sum_probs=20.1
Q ss_pred CCCeEEeeCChHHHHHHHHHHHH
Q psy6206 48 PLSVCFFVNSGSEANDLALRLAR 70 (83)
Q Consensus 48 ~~~~v~f~~sGseA~e~Alk~ar 70 (83)
+.+.++|+++|++|++.+++...
T Consensus 110 ~~~~v~~~~gg~~a~~~~~~~l~ 132 (435)
T 3piu_A 110 DPNHLVLTAGATSANETFIFCLA 132 (435)
T ss_dssp CGGGEEEEEHHHHHHHHHHHHHC
T ss_pred CHHHEEEcCChHHHHHHHHHHhc
Confidence 35689999999999999999764
No 184
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=96.05 E-value=0.052 Score=35.55 Aligned_cols=61 Identities=16% Similarity=-0.084 Sum_probs=39.8
Q ss_pred CHHHHHHHHHHHHhhc--cCC-CCcchHHHHHHHHHHhhCC--CCCCeEEeeCChHHHHHHHHHHH
Q psy6206 9 HPAVVKAACTQLALLN--TNN-RFLHDNLVLCARKLASLLP--DPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 9 ~p~i~~a~~~~~~~~~--~~~-~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGseA~e~Alk~a 69 (83)
+|.+.+++.+.++... +.. ....+....+++.+....+ ...+.|.++++|++|++.+++..
T Consensus 46 ~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l 111 (385)
T 1b5p_A 46 PEHVKEAARRALAQGKTKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAI 111 (385)
T ss_dssp CHHHHHHHHHHHHTTCCSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHh
Confidence 4788999888876531 111 1123444566666654332 23468999999999999999865
No 185
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=96.04 E-value=0.001 Score=44.15 Aligned_cols=38 Identities=13% Similarity=-0.084 Sum_probs=29.9
Q ss_pred HHHHHHHHHhhCCCCCCeEEeeCChHHHHH--HHHHHHHh
Q psy6206 34 LVLCARKLASLLPDPLSVCFFVNSGSEAND--LALRLARV 71 (83)
Q Consensus 34 ~~~la~~l~~~~p~~~~~v~f~~sGseA~e--~Alk~ar~ 71 (83)
..+|.+.|.+..+.+.+.|+++++|++++. .+++....
T Consensus 72 ~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~ 111 (423)
T 3ez1_A 72 LPSARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLH 111 (423)
T ss_dssp CHHHHHHHHHHTTSCGGGEEECSSCHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhCCChhhEEEeCCcHHHHHHHHHHHHHhc
Confidence 467888888887655679999999999997 77775443
No 186
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=96.00 E-value=0.0032 Score=42.39 Aligned_cols=60 Identities=15% Similarity=0.045 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHHHhhc-cC---------CCCcchHHHHHHHHHHhhCCCCC-CeEEe-eCChHHHHHHHHHH
Q psy6206 9 HPAVVKAACTQLALLN-TN---------NRFLHDNLVLCARKLASLLPDPL-SVCFF-VNSGSEANDLALRL 68 (83)
Q Consensus 9 ~p~i~~a~~~~~~~~~-~~---------~~~~~~~~~~la~~l~~~~p~~~-~~v~f-~~sGseA~e~Alk~ 68 (83)
+|+|.+++.+.+.... .+ +.-..+...+..+.|.+++..+. ..|+| +.+|||+++.+++=
T Consensus 39 p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~ 110 (386)
T 3qm2_A 39 PAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLN 110 (386)
T ss_dssp CHHHHHHHTCC-----------------------CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHh
Confidence 6888888877664421 00 11112334556666777665432 46888 69999999999973
No 187
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=95.92 E-value=0.019 Score=39.25 Aligned_cols=38 Identities=16% Similarity=0.165 Sum_probs=29.9
Q ss_pred HHHHHHHHhhCCCC--CCeEEeeCChHHHHHHHHHHHHhh
Q psy6206 35 VLCARKLASLLPDP--LSVCFFVNSGSEANDLALRLARVH 72 (83)
Q Consensus 35 ~~la~~l~~~~p~~--~~~v~f~~sGseA~e~Alk~ar~~ 72 (83)
.++.+.+.+.++.+ ...+.|+++||||+..|++.+|.+
T Consensus 135 ~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~ 174 (504)
T 2okj_A 135 QITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYK 174 (504)
T ss_dssp HHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHH
Confidence 44556677776543 568999999999999999999853
No 188
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=95.85 E-value=0.05 Score=36.38 Aligned_cols=37 Identities=22% Similarity=0.283 Sum_probs=31.4
Q ss_pred chHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 31 HDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 31 ~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
.+...+|.+.|.+..+ .+.++|+++|++|++.+++..
T Consensus 74 ~~~~~~l~~~la~~~~--~~~~~~~~~gt~a~~~al~~l 110 (456)
T 2ez2_A 74 SENFYHLERTVQELFG--FKHIVPTHQGRGAENLLSQLA 110 (456)
T ss_dssp CHHHHHHHHHHHHHHC--CSEEEEESSHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHhC--CCcEEEeCCcHHHHHHHHHHh
Confidence 4556789999998884 458999999999999999876
No 189
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=95.85 E-value=0.024 Score=36.82 Aligned_cols=46 Identities=20% Similarity=0.098 Sum_probs=32.6
Q ss_pred HHHHHHHHHhhC-CCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 34 LVLCARKLASLL-PDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 34 ~~~la~~l~~~~-p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
..+|.+.+.+.. +.+.+.++++++|++|++.+++... ....+||+.
T Consensus 65 ~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~--~~gd~Vl~~ 111 (375)
T 3op7_A 65 SPAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLI--EPGDHVISL 111 (375)
T ss_dssp CHHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHC--CTTCEEEEE
T ss_pred hHHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhc--CCCCEEEEe
Confidence 356777777765 3345799999999999999998652 223356654
No 190
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=95.81 E-value=0.00085 Score=44.72 Aligned_cols=73 Identities=11% Similarity=-0.028 Sum_probs=39.9
Q ss_pred CCCCCHHH--HHHHHHHHHhhccCCCCc-----chHHHHHHHHHHhhC-CCCCCe---EEeeCChHHHHHHHHHHHHhhc
Q psy6206 5 VGHCHPAV--VKAACTQLALLNTNNRFL-----HDNLVLCARKLASLL-PDPLSV---CFFVNSGSEANDLALRLARVHT 73 (83)
Q Consensus 5 lGh~~p~i--~~a~~~~~~~~~~~~~~~-----~~~~~~la~~l~~~~-p~~~~~---v~f~~sGseA~e~Alk~ar~~~ 73 (83)
+|+ +|.+ .+++.++++.. ....++ .+....+++.+.+.. +.+.+. ++++++|++|++.+++.... .
T Consensus 60 ~~~-~~~~~~~~a~~~~~~~~-~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-~ 136 (430)
T 2x5f_A 60 KDG-KMFASSLDAMFNDLTPD-EIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALTHGLSLVGDLFVN-Q 136 (430)
T ss_dssp TTE-ECCCHHHHTTBSSCCGG-GTSSCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHHHHHHHHHHHHCC-T
T ss_pred CCC-chhhHHHHHHHHhcCcc-cccccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCchHHHHHHHHHHhC-C
Confidence 443 4555 67766665431 111222 223344444443221 333456 99999999999999996532 2
Q ss_pred CCCceEEe
Q psy6206 74 NNDDVITQ 81 (83)
Q Consensus 74 ~r~~ii~~ 81 (83)
| .+|+..
T Consensus 137 g-d~Vl~~ 143 (430)
T 2x5f_A 137 D-DTILLP 143 (430)
T ss_dssp T-CEEEEE
T ss_pred C-CEEEEc
Confidence 3 356654
No 191
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=95.79 E-value=0.0032 Score=41.89 Aligned_cols=48 Identities=8% Similarity=-0.030 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHhhCC----CCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 32 DNLVLCARKLASLLP----DPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 32 ~~~~~la~~l~~~~p----~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
+....+++.+.+..+ .+.+.++++++|+|+++.+++.... .| .+|+..
T Consensus 87 ~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~-~g-d~Vl~~ 138 (428)
T 1iay_A 87 EFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLAD-PG-DAFLVP 138 (428)
T ss_dssp HHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCC-TT-CEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCC-CC-CeEEEc
Confidence 444556666554322 3356899999999999999997642 23 356554
No 192
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=95.73 E-value=0.024 Score=37.48 Aligned_cols=38 Identities=11% Similarity=0.062 Sum_probs=26.0
Q ss_pred hHHHHHHHHHHhhC-CCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 32 DNLVLCARKLASLL-PDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 32 ~~~~~la~~l~~~~-p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
+....+++.+.... |...+.++++++|++|++.+++..
T Consensus 84 ~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l 122 (418)
T 3rq1_A 84 DFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHHLIHNY 122 (418)
T ss_dssp HHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcccCccccccEEECCchHHHHHHHHHHh
Confidence 33455666664443 222238999999999999999854
No 193
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=95.66 E-value=0.033 Score=36.56 Aligned_cols=32 Identities=13% Similarity=0.021 Sum_probs=23.4
Q ss_pred CCeEEe--eCChHHHHHHHHHHHHhhcC-CCceEE
Q psy6206 49 LSVCFF--VNSGSEANDLALRLARVHTN-NDDVIT 80 (83)
Q Consensus 49 ~~~v~f--~~sGseA~e~Alk~ar~~~~-r~~ii~ 80 (83)
.+++.| +++|+||+..+++..+.+.+ ..+|+.
T Consensus 94 ~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv 128 (401)
T 7aat_A 94 SGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYL 128 (401)
T ss_dssp TTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEE
T ss_pred cCceEEEecCcchHHHHHHHHHHHHhccCCCEEEE
Confidence 458877 99999999999997765543 234554
No 194
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=95.61 E-value=0.034 Score=35.64 Aligned_cols=58 Identities=16% Similarity=0.056 Sum_probs=39.1
Q ss_pred CCHHHHHHHHHHHHhhccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 8 CHPAVVKAACTQLALLNTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
-.|++.+++.+.... .....+.+...+|.+.|.+..+ .+.+++++||++|++.+++..
T Consensus 16 p~~~~~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~g--~~~~~~~~~gt~a~~~~~~~~ 73 (347)
T 1jg8_A 16 PTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETFG--KEAALFVPSGTMGNQVSIMAH 73 (347)
T ss_dssp CCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHHT--CSEEEEESCHHHHHHHHHHHH
T ss_pred CCHHHHHHHhcCCCC--CcccCCChHHHHHHHHHHHHhC--CceEEEecCcHHHHHHHHHHh
Confidence 457777777543211 1111234556788888888874 458899999999999998754
No 195
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=95.51 E-value=0.012 Score=38.76 Aligned_cols=61 Identities=18% Similarity=0.044 Sum_probs=39.5
Q ss_pred CHHHHHHHHHHHHhh-ccCCCCc--chHHHHHHHHHHhhCCCC-CCeEEe-eCChHHHHHHHHHHH
Q psy6206 9 HPAVVKAACTQLALL-NTNNRFL--HDNLVLCARKLASLLPDP-LSVCFF-VNSGSEANDLALRLA 69 (83)
Q Consensus 9 ~p~i~~a~~~~~~~~-~~~~~~~--~~~~~~la~~l~~~~p~~-~~~v~f-~~sGseA~e~Alk~a 69 (83)
+|++.+++.+..... .....++ .+...++.+.+.+.++.+ .+.+.| +++|+||++.+++..
T Consensus 52 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l 117 (398)
T 2fyf_A 52 RLEQLQTLTTTAAALFGTSHRQAPVKNLVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGL 117 (398)
T ss_dssp CHHHHHGGGTTTTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHT
T ss_pred CHHHHHHHhhcCCCccCcCcCCHHHHHHHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHh
Confidence 577888876631111 1011111 133567888888888644 358888 999999999999865
No 196
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=95.32 E-value=0.018 Score=37.27 Aligned_cols=62 Identities=15% Similarity=0.057 Sum_probs=40.8
Q ss_pred CCHHHHHHHHHHHHhhc--------cCCCCc--chHHHHHHHHHHhhCCCCCC-e-EEeeCChHHHHHHHHHHH
Q psy6206 8 CHPAVVKAACTQLALLN--------TNNRFL--HDNLVLCARKLASLLPDPLS-V-CFFVNSGSEANDLALRLA 69 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~--------~~~~~~--~~~~~~la~~l~~~~p~~~~-~-v~f~~sGseA~e~Alk~a 69 (83)
-+|++.+++.+.+.... ....++ .+...++.+.+.+....+.+ . ++++++|+||++.+++..
T Consensus 15 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l 88 (362)
T 2c0r_A 15 LPLEVLERAQAEFVDYQHTGMSIMEMSHRGAVYEAVHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNF 88 (362)
T ss_dssp CCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhhhhcCccccccCCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhc
Confidence 47889999988775320 011111 22346788888887765433 5 578899999999998854
No 197
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=95.14 E-value=0.068 Score=35.19 Aligned_cols=43 Identities=16% Similarity=-0.037 Sum_probs=29.0
Q ss_pred HHHHHHHHhhCCC-CCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 35 VLCARKLASLLPD-PLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 35 ~~la~~l~~~~p~-~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
..+++.+.+.++. +.+.++++++|++|++.+++.. .|. +||..
T Consensus 61 ~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~---~gd-~Vl~~ 104 (374)
T 2aeu_A 61 EKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL---KPK-KVIHY 104 (374)
T ss_dssp HHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH---CCS-EEEEE
T ss_pred HHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC---CCC-EEEEe
Confidence 4455555555532 1268899999999999999965 443 56654
No 198
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=95.01 E-value=0.045 Score=37.18 Aligned_cols=73 Identities=12% Similarity=-0.033 Sum_probs=42.3
Q ss_pred CCCHHHHHHHHHHHHhh-c----cCCCCcchHHHHHHHHHHhhCCCCCC--eEEeeCChHHHHHHHHHHHHhhcCCCceE
Q psy6206 7 HCHPAVVKAACTQLALL-N----TNNRFLHDNLVLCARKLASLLPDPLS--VCFFVNSGSEANDLALRLARVHTNNDDVI 79 (83)
Q Consensus 7 h~~p~i~~a~~~~~~~~-~----~~~~~~~~~~~~la~~l~~~~p~~~~--~v~f~~sGseA~e~Alk~ar~~~~r~~ii 79 (83)
++++++.+++.++.... + ....++.+...++.+.+.+..+.+.. +++ .+||++|++.+++... ....+||
T Consensus 35 ~n~~~vl~A~~~~~~~~~~~~~~~g~~y~~~~~~~l~~~la~~~g~~~~~~~i~-~~sGt~Ai~~al~al~--~~Gd~Vl 111 (431)
T 3ht4_A 35 SNQFRVLESFGKHKISDSHFIPTTGYGYDDIGRDTLEKVYADVFGAEAGLVRPQ-IISGTHAISTALFGIL--RPGDELL 111 (431)
T ss_dssp HHHHHHHHHHHHTTCCGGGSCCCCTTCCSCHHHHHHHHHHHHHTTCSEECCBTT-SCSHHHHHHHHHHTTC--CTTCEEE
T ss_pred HHHHHHHHHHHHhchhhhhcCCCCCCCCChhhHHHHHHHHHHHhCCCcccccce-eeCHHHHHHHHHHHhC--CCCCEEE
Confidence 34567777776643211 1 11234456667899999998854322 222 4599999999987431 2223566
Q ss_pred Eec
Q psy6206 80 TQD 82 (83)
Q Consensus 80 ~~~ 82 (83)
+.+
T Consensus 112 ~~~ 114 (431)
T 3ht4_A 112 YIT 114 (431)
T ss_dssp ECS
T ss_pred EeC
Confidence 543
No 199
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=94.91 E-value=0.062 Score=37.28 Aligned_cols=65 Identities=18% Similarity=0.071 Sum_probs=43.7
Q ss_pred CCCCCCHHHHHHHHHHHHhhcc--CCCCcchHHHHHHHHHHhh----CCC-CCCeEEeeCChHHHHHHHHHH
Q psy6206 4 PVGHCHPAVVKAACTQLALLNT--NNRFLHDNLVLCARKLASL----LPD-PLSVCFFVNSGSEANDLALRL 68 (83)
Q Consensus 4 ~lGh~~p~i~~a~~~~~~~~~~--~~~~~~~~~~~la~~l~~~----~p~-~~~~v~f~~sGseA~e~Alk~ 68 (83)
..++.+|++++++.+++..... +.....+....+++.+.+. .+. +.+.++++++|++|+..+++.
T Consensus 112 ~~~~~~~~~v~a~~~~~~~~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~ 183 (533)
T 3f6t_A 112 ELGLNRDKVVAEWVNGAVANNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHS 183 (533)
T ss_dssp TTCCCHHHHHHHHHHHHHTCSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHH
T ss_pred CCCcCCcHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHH
Confidence 3456678899998888865422 2222334556677777544 222 135899999999999999984
No 200
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=94.54 E-value=0.098 Score=36.10 Aligned_cols=38 Identities=16% Similarity=0.165 Sum_probs=29.0
Q ss_pred HHHHHHHHhhCCCC--CCeEEeeCChHHHHHHHHHHHHhh
Q psy6206 35 VLCARKLASLLPDP--LSVCFFVNSGSEANDLALRLARVH 72 (83)
Q Consensus 35 ~~la~~l~~~~p~~--~~~v~f~~sGseA~e~Alk~ar~~ 72 (83)
..+++.+.+.++-+ ...+.|+++||+|+..|+..+|..
T Consensus 138 ~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~ 177 (511)
T 3vp6_A 138 QITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYK 177 (511)
T ss_dssp HHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHH
Confidence 44566667765432 458999999999999999998864
No 201
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=94.49 E-value=0.13 Score=35.14 Aligned_cols=52 Identities=17% Similarity=0.222 Sum_probs=37.3
Q ss_pred CCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 26 NNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 26 ~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
.+.+.++...++.++|.+..+. +..++.+||+||++.+++.... .| .+||+.
T Consensus 108 y~r~~~~~~~~l~~~lA~l~g~--~~~v~~~sG~~Ai~~al~~l~~-~G-d~Vi~~ 159 (445)
T 1qgn_A 108 YGRYGNPTTVVLEEKISALEGA--ESTLLMASGMCASTVMLLALVP-AG-GHIVTT 159 (445)
T ss_dssp BGGGCCHHHHHHHHHHHHHHTC--SEEEEESCHHHHHHHHHHHHSC-SS-CEEEEE
T ss_pred ccCCCChHHHHHHHHHHHHhCC--CcEEEeCCHHHHHHHHHHHHhC-CC-CEEEEc
Confidence 3445677788999999998854 3677789999999999984321 24 356654
No 202
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=93.97 E-value=0.23 Score=33.49 Aligned_cols=43 Identities=12% Similarity=0.015 Sum_probs=33.2
Q ss_pred ccCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHH
Q psy6206 24 NTNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRL 68 (83)
Q Consensus 24 ~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ 68 (83)
+.++.+.++...++.++|.++.+. +.+++++||++|+..+++.
T Consensus 74 ~~y~r~~~p~~~~le~~lA~l~g~--~~~i~~ssGt~Ai~~al~~ 116 (415)
T 2fq6_A 74 LFYGRRGTLTHFSLQQAMCELEGG--AGCVLFPCGAAAVANSILA 116 (415)
T ss_dssp CCCTTTCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHT
T ss_pred ccccCCCCchHHHHHHHHHHHhCC--CeEEEeCCHHHHHHHHHHH
Confidence 334556677788899999998754 3566679999999999983
No 203
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=93.75 E-value=0.059 Score=36.50 Aligned_cols=46 Identities=11% Similarity=0.186 Sum_probs=32.8
Q ss_pred hHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 32 DNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 32 ~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
+...++.+.+.+ .+.+ +.++|+++|++|++.+++... ....+|+..
T Consensus 57 ~~~~~~~~~la~-~g~~-~~v~~~~G~t~a~~~~~~a~~--~~gd~Vlv~ 102 (446)
T 2x3l_A 57 EVILKSMKQVEK-HSDY-DGYFLVNGTTSGILSVIQSFS--QKKGDILMA 102 (446)
T ss_dssp SHHHHHHHHHCS-CTTE-EEEEESSHHHHHHHHHHHTTT--TSSSCEEEC
T ss_pred hHHHHHHHHHHh-cCCC-ceEEEeCCHHHHHHHHHHHhc--CCCCEEEEe
Confidence 456778888888 7543 578899999999999998652 233455543
No 204
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=93.59 E-value=0.22 Score=33.64 Aligned_cols=70 Identities=13% Similarity=0.100 Sum_probs=41.1
Q ss_pred CCHHHHHHHHHHHHh-hcc----CCCCcchHHHHHHHHHHhhCCCCCCeEEe---eCChHHHHHHHHHHHHhhcCCCceE
Q psy6206 8 CHPAVVKAACTQLAL-LNT----NNRFLHDNLVLCARKLASLLPDPLSVCFF---VNSGSEANDLALRLARVHTNNDDVI 79 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~-~~~----~~~~~~~~~~~la~~l~~~~p~~~~~v~f---~~sGseA~e~Alk~ar~~~~r~~ii 79 (83)
|++++.+++.+..-. .+. ...+......+|.+.+.+.... +...+ ++||++|+..+++... ....+||
T Consensus 30 n~~~vl~a~~~~~~~~~~~~~~~~~~y~~~~~~~Le~~lA~l~g~--e~alv~p~~~sGt~Ai~~al~all--~~GD~Vl 105 (409)
T 3jzl_A 30 NQAKVLDAFQENKVSDFHFHPSTGYGYDDEGRDTLERVYATVFKT--EAALVRPQIISGTHAISTVLFGIL--RPDDELL 105 (409)
T ss_dssp HHHHHHHHHHHTTCCGGGGCCCCTTCTTCHHHHHHHHHHHHHHTC--SEEEEETTSCSHHHHHHHHHHHHC--CTTCEEE
T ss_pred hHHHHHHHHHHhhhhhhccCCCcCCCCChhHHHHHHHHHHHHhCC--CcEEEECCCccHHHHHHHHHHHhc--CCCCEEE
Confidence 456677777664311 111 1123344456788888888854 34444 8999999999987532 2223555
Q ss_pred Ee
Q psy6206 80 TQ 81 (83)
Q Consensus 80 ~~ 81 (83)
+.
T Consensus 106 ~~ 107 (409)
T 3jzl_A 106 YI 107 (409)
T ss_dssp EC
T ss_pred Ee
Confidence 43
No 205
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=93.52 E-value=0.18 Score=33.64 Aligned_cols=50 Identities=18% Similarity=0.130 Sum_probs=33.4
Q ss_pred CCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 27 NRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 27 ~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
+.++++...+|.+.|.+..+.+ ..++.+||++|+..+++ . .....+||+.
T Consensus 62 ~r~~~p~~~~l~~~la~~~g~~--~~i~~~sG~~ai~~~~~-l--~~~gd~Vl~~ 111 (403)
T 3cog_A 62 SRSGNPTRNCLEKAVAALDGAK--YCLAFASGLAATVTITH-L--LKAGDQIICM 111 (403)
T ss_dssp ----CHHHHHHHHHHHHHHTCS--EEEEESCHHHHHHHHHT-T--SCTTCEEEEE
T ss_pred cCCCCchHHHHHHHHHHHhCCC--cEEEECCHHHHHHHHHH-H--hCCCCEEEEe
Confidence 4456677788999999988543 56667799999999987 2 2233456654
No 206
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=93.46 E-value=0.16 Score=34.64 Aligned_cols=39 Identities=23% Similarity=0.158 Sum_probs=28.9
Q ss_pred HHHHHHHHHhhCCCCC---------CeEEeeCChHHHHHHHHHHHHhh
Q psy6206 34 LVLCARKLASLLPDPL---------SVCFFVNSGSEANDLALRLARVH 72 (83)
Q Consensus 34 ~~~la~~l~~~~p~~~---------~~v~f~~sGseA~e~Alk~ar~~ 72 (83)
..++++.+.+.++.+. ....|+++||+||-.|+..+|..
T Consensus 115 E~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~ 162 (475)
T 3k40_A 115 EVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAK 162 (475)
T ss_dssp HHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHH
Confidence 3456666777764321 26889999999999999999865
No 207
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=93.44 E-value=0.21 Score=31.77 Aligned_cols=42 Identities=21% Similarity=0.195 Sum_probs=28.4
Q ss_pred HHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 36 LCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 36 ~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
++.+.|.+..+. +..++.+||++|++.+++.... .| .+|+..
T Consensus 2 ~l~~~la~~~g~--~~~i~~~sG~~a~~~~~~~~~~-~g-~~v~~~ 43 (331)
T 1pff_A 2 ALEGKIAKLEHA--EACAATASGMGAIAASVWTFLK-AG-DHLISD 43 (331)
T ss_dssp HHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHHCC-TT-CEEEEE
T ss_pred hHHHHHHHHhCC--CeEEEeCChHHHHHHHHHHhcC-CC-CEEEEc
Confidence 456677777754 3777888999999999995421 23 356554
No 208
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=93.40 E-value=0.15 Score=34.78 Aligned_cols=39 Identities=26% Similarity=0.125 Sum_probs=28.1
Q ss_pred HHHHHHHHHhhCCCCC----------CeEEeeCChHHHHHHHHHHHHhh
Q psy6206 34 LVLCARKLASLLPDPL----------SVCFFVNSGSEANDLALRLARVH 72 (83)
Q Consensus 34 ~~~la~~l~~~~p~~~----------~~v~f~~sGseA~e~Alk~ar~~ 72 (83)
..++++.+.+.+.-+. ....|+++||+|+-.|+..+|..
T Consensus 120 E~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~ 168 (481)
T 4e1o_A 120 EMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKN 168 (481)
T ss_dssp HHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHH
Confidence 3456666666653211 25789999999999999999864
No 209
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=93.23 E-value=0.091 Score=33.73 Aligned_cols=61 Identities=15% Similarity=0.030 Sum_probs=39.7
Q ss_pred CCHHHHHHHHHHHHhh----c-c--CCC-Cc--chHHHHHHHHHHhhCCCC-CCeEEeeCCh-HHHHHHHHHH
Q psy6206 8 CHPAVVKAACTQLALL----N-T--NNR-FL--HDNLVLCARKLASLLPDP-LSVCFFVNSG-SEANDLALRL 68 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~----~-~--~~~-~~--~~~~~~la~~l~~~~p~~-~~~v~f~~sG-seA~e~Alk~ 68 (83)
-+|.+.+++.+.++.. . . ... .+ .+...++.+.+.+..... .+.+.|++++ ++|++.++..
T Consensus 14 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~~~ 86 (360)
T 1w23_A 14 LPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMN 86 (360)
T ss_dssp CCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHHHH
Confidence 3688999998877542 0 0 000 11 123567888888876543 3489999887 9999998863
No 210
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=93.09 E-value=0.22 Score=34.18 Aligned_cols=65 Identities=18% Similarity=0.097 Sum_probs=41.1
Q ss_pred CCCHHHHHHHHHHHHhhcc-CCCCc--chHHHHHHHHHHhhCCCC--CC---eEEeeCChHHHHHHHHHHHHh
Q psy6206 7 HCHPAVVKAACTQLALLNT-NNRFL--HDNLVLCARKLASLLPDP--LS---VCFFVNSGSEANDLALRLARV 71 (83)
Q Consensus 7 h~~p~i~~a~~~~~~~~~~-~~~~~--~~~~~~la~~l~~~~p~~--~~---~v~f~~sGseA~e~Alk~ar~ 71 (83)
+-+|.+.+++.+.++.... ...++ .+...++.+.|.+.+..+ .+ ...|+++|+||+..++..++.
T Consensus 67 ~~~~~v~~~l~~~~~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~ 139 (502)
T 3hbx_A 67 WMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKR 139 (502)
T ss_dssp CCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHH
Confidence 4578888888877655311 11222 233346777777776433 22 335799999999999987654
No 211
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=93.06 E-value=0.35 Score=32.66 Aligned_cols=46 Identities=15% Similarity=0.029 Sum_probs=31.4
Q ss_pred HHHHHHHHHhhCCCCCCeEEeeCChHH-HHHHHHHHHHhhcCCCceEE
Q psy6206 34 LVLCARKLASLLPDPLSVCFFVNSGSE-ANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 34 ~~~la~~l~~~~p~~~~~v~f~~sGse-A~e~Alk~ar~~~~r~~ii~ 80 (83)
..++.+.+.+.++.+.+ ++|+++|+| ++..++..++.+.+.+.||.
T Consensus 135 ~~~~~~~la~~~g~~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~ 181 (456)
T 2z67_A 135 TNKILESFFKQLGLNVH-AIATPISTGMSISLCLSAARKKYGSNVVIY 181 (456)
T ss_dssp HHHHHHHHHHHTTCCCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred HHHHHHHHHHHcCCCCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 35577888888865444 999999995 66668877666534444553
No 212
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=92.55 E-value=0.35 Score=32.75 Aligned_cols=37 Identities=30% Similarity=0.207 Sum_probs=27.8
Q ss_pred HHHHHHHHhhCCCCC---------CeEEeeCChHHHHHHHHHHHHh
Q psy6206 35 VLCARKLASLLPDPL---------SVCFFVNSGSEANDLALRLARV 71 (83)
Q Consensus 35 ~~la~~l~~~~p~~~---------~~v~f~~sGseA~e~Alk~ar~ 71 (83)
.++++.+.+.++.+. ..+.|+++||||+-.|+..+|.
T Consensus 116 ~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~ 161 (486)
T 1js3_A 116 TVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAART 161 (486)
T ss_dssp HHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHH
Confidence 456666777764321 3588999999999999998875
No 213
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=92.30 E-value=0.4 Score=32.79 Aligned_cols=48 Identities=19% Similarity=0.126 Sum_probs=34.6
Q ss_pred CcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 29 FLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 29 ~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
...+...++++.+.+..+. +.++++++|++|++.++++ .....+||..
T Consensus 130 ~g~~~~~~l~~~la~~~g~--~~~i~~~sGt~al~~~l~~---~~~Gd~Vi~~ 177 (464)
T 1ibj_A 130 SGNPTRDALESLLAKLDKA--DRAFCFTSGMAALSAVTHL---IKNGEEIVAG 177 (464)
T ss_dssp TCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHTT---SCTTCEEEEE
T ss_pred CCCHHHHHHHHHHHHHhCC--CeEEEECCHHHHHHHHHHH---hCCCCEEEEE
Confidence 4456678899999888753 4888899999999988763 2333456654
No 214
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=92.17 E-value=0.7 Score=32.22 Aligned_cols=65 Identities=14% Similarity=0.065 Sum_probs=40.5
Q ss_pred CCCCCCHHHHHHHHHHHHhhccC-CCCcchHHHHHHHHHHhh-C-----CCCCCeEEeeCChHHHHHHHHHH
Q psy6206 4 PVGHCHPAVVKAACTQLALLNTN-NRFLHDNLVLCARKLASL-L-----PDPLSVCFFVNSGSEANDLALRL 68 (83)
Q Consensus 4 ~lGh~~p~i~~a~~~~~~~~~~~-~~~~~~~~~~la~~l~~~-~-----p~~~~~v~f~~sGseA~e~Alk~ 68 (83)
..++..|.+++++.+++....++ .....+....+++.+.+. . +.+.+.|+++++++|+++.+++.
T Consensus 113 ~~~~~~~~~~~al~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~ 184 (546)
T 2zy4_A 113 QLGLDPAAFLHEMVDGILGCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFES 184 (546)
T ss_dssp TSCCCHHHHHHHHHHHHHTCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHH
T ss_pred CCCCCChHHHHHHHHhhhcCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHH
Confidence 34677788888888777432111 112234445556555322 1 21346899999999999999986
No 215
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=92.08 E-value=0.35 Score=33.09 Aligned_cols=62 Identities=19% Similarity=0.195 Sum_probs=38.3
Q ss_pred CCHHHHHHHHHHHHhhc--cCCCCc-----chHHHHHHHHHHhhC--CCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 8 CHPAVVKAACTQLALLN--TNNRFL-----HDNLVLCARKLASLL--PDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~--~~~~~~-----~~~~~~la~~l~~~~--p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
-.+++++++.+.+.... ....|. .+....+++.+.+.. +.+.+.++++++|++|+..+++..
T Consensus 107 ~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l 177 (500)
T 3tcm_A 107 FSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLL 177 (500)
T ss_dssp SCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHH
Confidence 34557777777776531 112222 233345555554332 234568999999999999999865
No 216
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=91.73 E-value=0.31 Score=33.81 Aligned_cols=62 Identities=24% Similarity=0.235 Sum_probs=36.3
Q ss_pred CCHHHHHHHHHHHHhhc---cC-CCCc-----chHHH-HHHHHHHhhCCCCCC---eEEeeCChHHHHHHHHHHH
Q psy6206 8 CHPAVVKAACTQLALLN---TN-NRFL-----HDNLV-LCARKLASLLPDPLS---VCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~---~~-~~~~-----~~~~~-~la~~l~~~~p~~~~---~v~f~~sGseA~e~Alk~a 69 (83)
-+|.|.+|+.+.+...+ .+ ..+. ....+ ...+++.++++.+.+ -.++.+||++|+..++...
T Consensus 66 ~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al 140 (490)
T 2a7v_A 66 CSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTAL 140 (490)
T ss_dssp CCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHH
Confidence 46788888777664421 01 1111 11222 344778888865443 2467779999999999743
No 217
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=90.96 E-value=0.092 Score=34.59 Aligned_cols=72 Identities=11% Similarity=0.009 Sum_probs=40.8
Q ss_pred CCHHHHHHHHHHHHhhccCCCCc-chHHHHHHHHHHhhC-CCC-----CCeEEe--eCChHHHHHHHHHHHHhhcCC-Cc
Q psy6206 8 CHPAVVKAACTQLALLNTNNRFL-HDNLVLCARKLASLL-PDP-----LSVCFF--VNSGSEANDLALRLARVHTNN-DD 77 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~~~~~~~-~~~~~~la~~l~~~~-p~~-----~~~v~f--~~sGseA~e~Alk~ar~~~~r-~~ 77 (83)
.+|.+.+++.++.... ...+. .....+|.+.+.+.. ... .+++.+ +.+|++|++.+..+.+.+.++ .+
T Consensus 56 ~~~~v~~a~~~a~~~~--~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~ 133 (409)
T 4eu1_A 56 DQPFVLECVKQATLGT--NMDYAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNR 133 (409)
T ss_dssp SCCCCCHHHHTCCCCS--CCCCCCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCE
T ss_pred CCEeecHHHHhcCccc--cccCCCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCE
Confidence 4566777877762221 11221 111234444444432 111 346755 899999999999888877654 56
Q ss_pred eEEe
Q psy6206 78 VITQ 81 (83)
Q Consensus 78 ii~~ 81 (83)
|+..
T Consensus 134 Vlv~ 137 (409)
T 4eu1_A 134 IYGP 137 (409)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6653
No 218
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=90.91 E-value=1.1 Score=29.77 Aligned_cols=39 Identities=18% Similarity=0.117 Sum_probs=30.8
Q ss_pred CcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 29 FLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 29 ~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
..++...++.+.+.+..+. +.+++++||++|+..+++..
T Consensus 59 ~~~~~~~~l~~~ia~~~g~--~~~i~~~~g~~ai~~~~~~l 97 (404)
T 1e5e_A 59 LGNPTVSNLEGKIAFLEKT--EACVATSSGMGAIAATVLTI 97 (404)
T ss_dssp TCCHHHHHHHHHHHHHHTC--SEEEEESSHHHHHHHHHHHH
T ss_pred CcChHHHHHHHHHHHHhCC--CcEEEeCChHHHHHHHHHHH
Confidence 3456667888888888754 47889999999999999854
No 219
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=90.09 E-value=0.03 Score=37.28 Aligned_cols=36 Identities=17% Similarity=-0.008 Sum_probs=26.0
Q ss_pred HHHHHHHHHhhCCCCCCeEEeeCChHHHH--HHHHHHH
Q psy6206 34 LVLCARKLASLLPDPLSVCFFVNSGSEAN--DLALRLA 69 (83)
Q Consensus 34 ~~~la~~l~~~~p~~~~~v~f~~sGseA~--e~Alk~a 69 (83)
..+|.+.+.+..+.+.++|+++++++|++ ...++..
T Consensus 78 ~~~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~~l 115 (422)
T 3d6k_A 78 IADIRELWAEALGLPADLVVAQDGSSLNIMFDLISWSY 115 (422)
T ss_dssp CHHHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCChhHEEEecchHHHHHHHHHHHHh
Confidence 45666777766655556899999999997 6666644
No 220
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=89.76 E-value=1.9 Score=29.50 Aligned_cols=60 Identities=12% Similarity=0.007 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHhhc------cC-CCCcchHHHHHHHHHHhhC---CCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 10 PAVVKAACTQLALLN------TN-NRFLHDNLVLCARKLASLL---PDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 10 p~i~~a~~~~~~~~~------~~-~~~~~~~~~~la~~l~~~~---p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
.++.+++.+.++... +. .....+....+++.+.+.. +...+.+++++++++|+..+++..
T Consensus 104 ~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l 173 (498)
T 3ihj_A 104 EDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKIL 173 (498)
T ss_dssp HHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHH
Confidence 344566666665421 11 1112244566777776542 334579999999999999999854
No 221
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=88.66 E-value=0.65 Score=31.00 Aligned_cols=49 Identities=12% Similarity=0.064 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 32 DNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 32 ~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
+...++.+.+.+.++.+...+.++++|+.+.|.++...+ +..+.+||..
T Consensus 108 ~~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~-~~~gd~Viv~ 156 (438)
T 1wyu_A 108 QATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALR-ETGRMGVLVS 156 (438)
T ss_dssp HHHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHH-HHTCCEEEEE
T ss_pred HHHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHh-cCCCCEEEEc
Confidence 345678888888875443456788888855555543333 3444566653
No 222
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=88.63 E-value=1.7 Score=28.74 Aligned_cols=48 Identities=10% Similarity=0.045 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHhhCCCC---------CCeEEeeCChHHHHHHHHHHHHhhcCCCceEEe
Q psy6206 32 DNLVLCARKLASLLPDP---------LSVCFFVNSGSEANDLALRLARVHTNNDDVITQ 81 (83)
Q Consensus 32 ~~~~~la~~l~~~~p~~---------~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~ 81 (83)
+....+++.+.+..+.. .+.|+++++|++|++.+++.... .| .+|+..
T Consensus 82 ~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~-~g-d~Vlv~ 138 (425)
T 2r2n_A 82 ELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIIN-PG-DNVLLD 138 (425)
T ss_dssp HHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCC-TT-CEEEEE
T ss_pred HHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCC-CC-CEEEEe
Confidence 45566777776543322 25899999999999999987532 23 345543
No 223
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=88.22 E-value=0.97 Score=29.84 Aligned_cols=38 Identities=18% Similarity=0.051 Sum_probs=27.8
Q ss_pred HHHHHHHHHhhCCCCCCeEEeeCChHHHH--HHHHHHHHh
Q psy6206 34 LVLCARKLASLLPDPLSVCFFVNSGSEAN--DLALRLARV 71 (83)
Q Consensus 34 ~~~la~~l~~~~p~~~~~v~f~~sGseA~--e~Alk~ar~ 71 (83)
..+|.+.|.+.++.+.+.|++++++++++ +.+++....
T Consensus 80 ~~~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~ 119 (427)
T 3ppl_A 80 IVDIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIF 119 (427)
T ss_dssp CHHHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHhc
Confidence 34666666666655557999999999999 688875443
No 224
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=87.71 E-value=1.4 Score=29.96 Aligned_cols=69 Identities=17% Similarity=0.097 Sum_probs=38.9
Q ss_pred CHHHHHHHHHHHHhh-c----cCCCCcchHHHHHHHHHHhhCCCCCCeEEe---eCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 9 HPAVVKAACTQLALL-N----TNNRFLHDNLVLCARKLASLLPDPLSVCFF---VNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 9 ~p~i~~a~~~~~~~~-~----~~~~~~~~~~~~la~~l~~~~p~~~~~v~f---~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
+++|.+++.+..... + ....+......+|.+++.++... +...+ ++||++|+..++... .....+||+
T Consensus 46 ~~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~g~~~Le~~lA~l~g~--e~alv~p~~~sGt~A~~~al~al--l~pGD~Vl~ 121 (427)
T 3hvy_A 46 QLKVLKAFQEERISESHFTNSSGYGYNDIGRDSLDRVYANIFNT--ESAFVRPHFVNGTHAIGAALFGN--LRPNDTMMS 121 (427)
T ss_dssp HHHHHHHHHHTTCCGGGSCCCCTTCTTCHHHHHHHHHHHHHHTC--SEEEEETTCCSHHHHHHHHHHHT--CCTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHhcccCcCCCCCchhHHHHHHHHHHHhCC--CceEEeCCCCcHHHHHHHHHHHh--cCCCCEEEE
Confidence 456666665532211 1 11123334456788888888854 33444 799999999888642 222235554
Q ss_pred e
Q psy6206 81 Q 81 (83)
Q Consensus 81 ~ 81 (83)
.
T Consensus 122 ~ 122 (427)
T 3hvy_A 122 I 122 (427)
T ss_dssp C
T ss_pred e
Confidence 3
No 225
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=85.17 E-value=5.7 Score=26.92 Aligned_cols=38 Identities=13% Similarity=-0.140 Sum_probs=26.8
Q ss_pred cchHHHHHHHHHHhhCCCCCCeEEe--eCChHHHHHHHHHH
Q psy6206 30 LHDNLVLCARKLASLLPDPLSVCFF--VNSGSEANDLALRL 68 (83)
Q Consensus 30 ~~~~~~~la~~l~~~~p~~~~~v~f--~~sGseA~e~Alk~ 68 (83)
......+|.+.+.++...+. .+.| ++||++|+..++..
T Consensus 71 ~~~~~~~Le~~lA~l~g~e~-alv~p~~~sGt~Ai~~al~a 110 (427)
T 3i16_A 71 GDIGRDSLDAVYARVFNTES-ALVRPHFVNGTHALGAALFG 110 (427)
T ss_dssp TCHHHHHHHHHHHHHHTCSE-EEEETTCCSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCcc-eEEeCCCccHHHHHHHHHHH
Confidence 33445678888888885432 2444 89999999988874
No 226
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=83.38 E-value=2.8 Score=28.55 Aligned_cols=73 Identities=18% Similarity=0.098 Sum_probs=40.7
Q ss_pred CCCHHHHHHHHHHHHhhc---cCC-CC-c-ch----HHHHHHHHHHhhCCCCCCe---EEeeCChHHHHHHHHHHHHhhc
Q psy6206 7 HCHPAVVKAACTQLALLN---TNN-RF-L-HD----NLVLCARKLASLLPDPLSV---CFFVNSGSEANDLALRLARVHT 73 (83)
Q Consensus 7 h~~p~i~~a~~~~~~~~~---~~~-~~-~-~~----~~~~la~~l~~~~p~~~~~---v~f~~sGseA~e~Alk~ar~~~ 73 (83)
.-+|.|.+++.+.+.... .+. .+ . .+ ....+.+++.+.++.+.+. ....+||++|+..++... .-.
T Consensus 55 ~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~al-l~p 133 (483)
T 1rv3_A 55 FASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTAL-VEP 133 (483)
T ss_dssp CCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHH-TCT
T ss_pred CCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEECCcHHHHHHHHHHh-cCC
Confidence 456888888887775431 111 11 1 12 2234557788887654432 245577888888877643 222
Q ss_pred CCCceEEe
Q psy6206 74 NNDDVITQ 81 (83)
Q Consensus 74 ~r~~ii~~ 81 (83)
| .+||..
T Consensus 134 G-D~Vl~~ 140 (483)
T 1rv3_A 134 H-GRIMGL 140 (483)
T ss_dssp T-CEEEEE
T ss_pred C-CEEEEe
Confidence 3 355543
No 227
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=73.39 E-value=8.4 Score=20.48 Aligned_cols=47 Identities=15% Similarity=0.006 Sum_probs=29.9
Q ss_pred HHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 34 LVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 34 ~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
...+.+.+.+ ++.+..-|++|.+|..+..++-.+... |-+++..++|
T Consensus 45 ~~~l~~~~~~-l~~~~~ivvyc~~g~rs~~a~~~L~~~--G~~~v~~l~G 91 (108)
T 1gmx_A 45 NDTLGAFMRD-NDFDTPVMVMCYHGNSSKGAAQYLLQQ--GYDVVYSIDG 91 (108)
T ss_dssp HHHHHHHHHH-SCTTSCEEEECSSSSHHHHHHHHHHHH--TCSSEEEETT
T ss_pred HHHHHHHHHh-cCCCCCEEEEcCCCchHHHHHHHHHHc--CCceEEEecC
Confidence 3456666655 454455678899998887777666554 5445655543
No 228
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=73.15 E-value=0.92 Score=30.39 Aligned_cols=21 Identities=5% Similarity=-0.276 Sum_probs=18.4
Q ss_pred CCeEEeeCChHHHHHHHHHHH
Q psy6206 49 LSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 49 ~~~v~f~~sGseA~e~Alk~a 69 (83)
.+.+.++++++++++.+++..
T Consensus 123 ~~~iv~t~G~~~al~~~~~~l 143 (427)
T 2hox_A 123 DRYIVFGVGVTQLIHGLVISL 143 (427)
T ss_dssp TCEEEEESHHHHHHHHHHHHH
T ss_pred CCEEEEeCCHHHHHHHHHHHH
Confidence 468999999999999998854
No 229
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=69.87 E-value=11 Score=20.85 Aligned_cols=42 Identities=12% Similarity=0.030 Sum_probs=25.7
Q ss_pred HHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 40 KLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 40 ~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
.+.+.++.+..-|++|.+|..|..++..+... |-+++..++|
T Consensus 74 ~~~~~l~~~~~ivvyC~~G~rs~~aa~~L~~~--G~~~v~~l~G 115 (129)
T 1tq1_A 74 QVSSHFGQSDNIIVGCQSGGRSIKATTDLLHA--GFTGVKDIVG 115 (129)
T ss_dssp HHTTTCCTTSSEEEEESSCSHHHHHHHHHHHH--HCCSEEEEEC
T ss_pred HHHhhCCCCCeEEEECCCCcHHHHHHHHHHHc--CCCCeEEeCC
Confidence 33333454455688999999888877776554 3334544443
No 230
>1vpq_A Hypothetical protein TM1631; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.1.32.1
Probab=68.70 E-value=13 Score=23.88 Aligned_cols=44 Identities=18% Similarity=0.196 Sum_probs=31.7
Q ss_pred CcchHHHHHHHHHHhhCCCC-CCeEEeeC-ChHHHHHHHHHHHHhh
Q psy6206 29 FLHDNLVLCARKLASLLPDP-LSVCFFVN-SGSEANDLALRLARVH 72 (83)
Q Consensus 29 ~~~~~~~~la~~l~~~~p~~-~~~v~f~~-sGseA~e~Alk~ar~~ 72 (83)
+..+...+++++|.+....+ .-.|+|-| .+..|.++|.++.+..
T Consensus 224 Y~~~eL~~wa~~i~~~~~~~~~vyv~FnN~~~g~A~~nA~~L~~~L 269 (273)
T 1vpq_A 224 YSEEELKTLFEDVVELSRRVKETYVFFNNCYKGQAAINALQFKKML 269 (273)
T ss_dssp CCHHHHHHHHHHHHHHHTTSSEEEEEECCCGGGHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhcCCCEEEEEeCCCcchHHHHHHHHHHHH
Confidence 34455678899988875432 33678865 5789999999988765
No 231
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=68.65 E-value=23 Score=25.85 Aligned_cols=37 Identities=22% Similarity=0.274 Sum_probs=25.5
Q ss_pred chHHHHHHHHHHhhCCCCCCeEEeeCCh-HHHHHHHHHHH
Q psy6206 31 HDNLVLCARKLASLLPDPLSVCFFVNSG-SEANDLALRLA 69 (83)
Q Consensus 31 ~~~~~~la~~l~~~~p~~~~~v~f~~sG-seA~e~Alk~a 69 (83)
.....++.+.+.+.++. +..+|..+| ++|+..++...
T Consensus 172 ~~~i~e~e~~lA~~~ga--e~~i~v~nGtt~an~~ai~al 209 (730)
T 1c4k_A 172 EGPAVAAEKHAARVYNA--DKTYFVLGGSSNANNTVTSAL 209 (730)
T ss_dssp BTHHHHHHHHHHHHTTC--SEEEEESSHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHCC--CcEEEECCHHHHHHHHHHHHh
Confidence 35567888888888854 444555555 59999888754
No 232
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=67.73 E-value=18 Score=26.44 Aligned_cols=38 Identities=16% Similarity=0.183 Sum_probs=27.6
Q ss_pred cchHHHHHHHHHHhhCCCCCCeEEeeCCh-HHHHHHHHHHH
Q psy6206 30 LHDNLVLCARKLASLLPDPLSVCFFVNSG-SEANDLALRLA 69 (83)
Q Consensus 30 ~~~~~~~la~~l~~~~p~~~~~v~f~~sG-seA~e~Alk~a 69 (83)
++....++.+.+.+.++ .++.+|.++| +.|+..++...
T Consensus 193 ~~g~i~eaE~~lA~~fG--a~~a~~v~nGts~An~~ai~al 231 (715)
T 3n75_A 193 HSGPHKEAEQYIARVFN--ADRSYMVTNGTSTANKIVGMYS 231 (715)
T ss_dssp TBTHHHHHHHHHHHHHT--CSEEEEESSHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhC--CCCceEECcHHHHHHHHHHHHh
Confidence 45566778788888884 4678888888 58888877643
No 233
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=65.98 E-value=13 Score=19.73 Aligned_cols=46 Identities=9% Similarity=0.042 Sum_probs=28.1
Q ss_pred HHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 36 LCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 36 ~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
++.+.+.+.++.+..-|++|.+|..|..++-.+... |-++|..++|
T Consensus 40 ~l~~~~~~~l~~~~~ivvyc~~g~rs~~a~~~L~~~--G~~~v~~l~G 85 (106)
T 3hix_A 40 DLVDRASSSLEKSRDIYVYGAGDEQTSQAVNLLRSA--GFEHVSELKG 85 (106)
T ss_dssp GHHHHHHHHSCTTSCEEEECSSHHHHHHHHHHHHHT--TCSCEEECTT
T ss_pred HHHHHHHhcCCCCCeEEEEECCCChHHHHHHHHHHc--CCcCEEEecC
Confidence 455555444555455678889998877766655443 4445555543
No 234
>2ek0_A Stage V sporulation protein S (spovs) related Pro; structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus} PDB: 2eh1_A
Probab=65.86 E-value=14 Score=20.01 Aligned_cols=39 Identities=18% Similarity=0.022 Sum_probs=27.9
Q ss_pred CcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHH---HHHhh
Q psy6206 29 FLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALR---LARVH 72 (83)
Q Consensus 29 ~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk---~ar~~ 72 (83)
-|+.....++..+.+- ..+-...-|..|+..|+| +||.|
T Consensus 11 ~P~~VAGAIA~~lRe~-----~~veiqAIGa~AvNqAVKAIAIARg~ 52 (90)
T 2ek0_A 11 RPNSVAGAIAAMLRTK-----GEVEVQAIGPQAVNQAVKAIAIARGY 52 (90)
T ss_dssp CHHHHHHHHHHHHHHH-----SEEEEEECSHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHhcC-----CceEEEEECHHHHHHHHHHHHHHHHh
Confidence 3444455666666553 277788899999999999 66766
No 235
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=64.56 E-value=17 Score=20.53 Aligned_cols=46 Identities=9% Similarity=0.042 Sum_probs=27.8
Q ss_pred HHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 36 LCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 36 ~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
.+.+.+....+.+..-|++|.+|..|..++..+... |-++|..++|
T Consensus 44 ~l~~~~~~~l~~~~~ivvyC~~g~rs~~aa~~L~~~--G~~~v~~l~G 89 (141)
T 3ilm_A 44 DLVDRASSSLEKSRDIYVYGAGDEQTSQAVNLLRSA--GFEHVSELKG 89 (141)
T ss_dssp GHHHHHHTTSCTTSEEEEECSSHHHHHHHHHHHHHT--TCCSEEECTT
T ss_pred HHHHHHHhcCCCCCeEEEEECCChHHHHHHHHHHHc--CCCCEEEecC
Confidence 455555444554444678888998888777666443 4445555543
No 236
>1vpy_A Protein (hypothetical protein EF0366); TIM alpha/beta barrel fold, structural genomics, joint cente structural genomics, JCSG; 2.52A {Enterococcus faecalis} SCOP: c.1.32.1 PDB: 1ztv_A
Probab=62.92 E-value=18 Score=23.31 Aligned_cols=45 Identities=18% Similarity=0.281 Sum_probs=32.3
Q ss_pred CcchHHHHHHHHHHhhCCCC-CCeEEeeC-ChHHHHHHHHHHHHhhc
Q psy6206 29 FLHDNLVLCARKLASLLPDP-LSVCFFVN-SGSEANDLALRLARVHT 73 (83)
Q Consensus 29 ~~~~~~~~la~~l~~~~p~~-~~~v~f~~-sGseA~e~Alk~ar~~~ 73 (83)
+..+...+++++|.+....+ .-.|+|-| .+..|.++|.++.+...
T Consensus 229 Y~~~eL~~wa~ri~~~~~~~~~vyv~FnN~~~g~A~~nA~~L~~~L~ 275 (289)
T 1vpy_A 229 YNTQEIADLSEAVLKMSQEAKEVGVIFNNNSGGDAAENALQMQKVLN 275 (289)
T ss_dssp CCHHHHHHHHHHHHHHHTSCSEEEEEECSBSHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHHHhcCCCEEEEEeCCchhhHHHHHHHHHHHhh
Confidence 44466678899988865432 23677765 58899999999988764
No 237
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=62.40 E-value=16 Score=19.48 Aligned_cols=47 Identities=9% Similarity=0.094 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 33 NLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 33 ~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
+..++.+.+.++ +.+..-|++|.+|..|..++..+... |- ++..++|
T Consensus 41 p~~~l~~~~~~l-~~~~~ivvyC~~G~rs~~aa~~L~~~--G~-~v~~l~G 87 (108)
T 3gk5_A 41 PISELREKWKIL-ERDKKYAVICAHGNRSAAAVEFLSQL--GL-NIVDVEG 87 (108)
T ss_dssp CHHHHHHHGGGS-CTTSCEEEECSSSHHHHHHHHHHHTT--TC-CEEEETT
T ss_pred CHHHHHHHHHhC-CCCCeEEEEcCCCcHHHHHHHHHHHc--CC-CEEEEcC
Confidence 445676766664 44455778899998887766655432 33 5555543
No 238
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=61.42 E-value=20 Score=20.22 Aligned_cols=34 Identities=15% Similarity=0.064 Sum_probs=20.7
Q ss_pred CCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 48 PLSVCFFVNSGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 48 ~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
+..-|++|.+|.-|..+|..+... |-+++..++|
T Consensus 80 ~~~ivvyC~~G~rS~~aa~~L~~~--G~~~v~~l~G 113 (148)
T 2fsx_A 80 ERPVIFLCRSGNRSIGAAEVATEA--GITPAYNVLD 113 (148)
T ss_dssp -CCEEEECSSSSTHHHHHHHHHHT--TCCSEEEETT
T ss_pred CCEEEEEcCCChhHHHHHHHHHHc--CCcceEEEcC
Confidence 344678899998877666555443 4445655543
No 239
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=59.42 E-value=7.8 Score=25.26 Aligned_cols=36 Identities=25% Similarity=0.288 Sum_probs=23.6
Q ss_pred cchHHHHHHHHHHhhCCCCCCeE--EeeCChHHHHHHH
Q psy6206 30 LHDNLVLCARKLASLLPDPLSVC--FFVNSGSEANDLA 65 (83)
Q Consensus 30 ~~~~~~~la~~l~~~~p~~~~~v--~f~~sGseA~e~A 65 (83)
+.+...+|.+.|.+....+-+-| .|+-|||.++.+.
T Consensus 224 ~~~kp~~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~ 261 (319)
T 1eg2_A 224 PTQKPAAVIERLVRALSHPGSTVLDFFAGSGVTARVAI 261 (319)
T ss_dssp TTCCCHHHHHHHHHHHSCTTCEEEETTCTTCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHhCCCCCEEEecCCCCCHHHHHHH
Confidence 33444678888877643333444 7899999988754
No 240
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=58.39 E-value=16 Score=18.34 Aligned_cols=39 Identities=15% Similarity=0.228 Sum_probs=25.0
Q ss_pred HHHHHHHHHHhhC-CCCCCeEEeeCChHHHHHHHHHHHHh
Q psy6206 33 NLVLCARKLASLL-PDPLSVCFFVNSGSEANDLALRLARV 71 (83)
Q Consensus 33 ~~~~la~~l~~~~-p~~~~~v~f~~sGseA~e~Alk~ar~ 71 (83)
+..++.+.+.++. +.+..-|++|.+|..|..+|-.+...
T Consensus 25 p~~~l~~~~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~ 64 (85)
T 2jtq_A 25 PLKEVKERIATAVPDKNDTVKVYCNAGRQSGQAKEILSEM 64 (85)
T ss_dssp CHHHHHHHHHHHCCCTTSEEEEEESSSHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHhCCCCCCcEEEEcCCCchHHHHHHHHHHc
Confidence 3445666666653 22334578889999888877776553
No 241
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=53.13 E-value=6.4 Score=24.60 Aligned_cols=32 Identities=16% Similarity=0.148 Sum_probs=21.0
Q ss_pred HHHHHHHHHhhCCCCCCeE--EeeCChHHHHHHH
Q psy6206 34 LVLCARKLASLLPDPLSVC--FFVNSGSEANDLA 65 (83)
Q Consensus 34 ~~~la~~l~~~~p~~~~~v--~f~~sGseA~e~A 65 (83)
..+|.+++.+..-.+-+.| .|+-|||.++++.
T Consensus 198 p~~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~ 231 (260)
T 1g60_A 198 PRDLIERIIRASSNPNDLVLDCFMGSGTTAIVAK 231 (260)
T ss_dssp CHHHHHHHHHHHCCTTCEEEESSCTTCHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHH
Confidence 3567777766542223445 7999999998854
No 242
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=52.32 E-value=28 Score=19.21 Aligned_cols=44 Identities=11% Similarity=0.086 Sum_probs=25.3
Q ss_pred HHHHHHhhC--CCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEec
Q psy6206 37 CARKLASLL--PDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQD 82 (83)
Q Consensus 37 la~~l~~~~--p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~ 82 (83)
+.+.+.+.. +.+..-|++|.+|.-+..+|..|... |-+++..++
T Consensus 61 ~~~~l~~~~~~~~~~~ivv~C~sG~RS~~aa~~L~~~--G~~~v~~l~ 106 (134)
T 1vee_A 61 FLKKLSLKFKDPENTTLYILDKFDGNSELVAELVALN--GFKSAYAIK 106 (134)
T ss_dssp HHHHHHTTCSCGGGCEEEEECSSSTTHHHHHHHHHHH--TCSEEEECT
T ss_pred HHHHHHHHhCCCCCCEEEEEeCCCCcHHHHHHHHHHc--CCcceEEec
Confidence 445554444 22334578888998887666655443 444555543
No 243
>1rhs_A Sulfur-substituted rhodanese; transferase, sulfurtransferase; 1.36A {Bos taurus} SCOP: c.46.1.2 c.46.1.2 PDB: 1boh_A 1boi_A 1orb_A 2ora_A 1dp2_A* 1rhd_A
Probab=49.48 E-value=46 Score=20.90 Aligned_cols=46 Identities=15% Similarity=0.038 Sum_probs=28.4
Q ss_pred HHHHHHHhh-CCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 36 LCARKLASL-LPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 36 ~la~~l~~~-~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
++.+.+.+. .+.+-.-|++|.+|..|..++..+... |-+++..++|
T Consensus 227 ~l~~~~~~~~~~~~~~ivv~C~sG~rs~~a~~~L~~~--G~~~v~~~~G 273 (296)
T 1rhs_A 227 ELRAMFEAKKVDLTKPLIATCRKGVTACHIALAAYLC--GKPDVAIYDG 273 (296)
T ss_dssp HHHHHHHHTTCCTTSCEEEECSSSSTHHHHHHHHHHT--TCCCCEEESS
T ss_pred HHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHc--CCCCceeeCC
Confidence 455555542 333345678899999988888776533 4445555544
No 244
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=45.01 E-value=62 Score=21.43 Aligned_cols=48 Identities=10% Similarity=-0.005 Sum_probs=29.0
Q ss_pred hHHHHHHHHHHhhCCC--CCCe--EEeeCChHHHHHHHHHHHHhhcCCCceEE
Q psy6206 32 DNLVLCARKLASLLPD--PLSV--CFFVNSGSEANDLALRLARVHTNNDDVIT 80 (83)
Q Consensus 32 ~~~~~la~~l~~~~p~--~~~~--v~f~~sGseA~e~Alk~ar~~~~r~~ii~ 80 (83)
+....+++.+...-.. ..++ +..+++|++|++.++++...+.. ..|+.
T Consensus 76 ~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv 127 (405)
T 3k7y_A 76 DFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYV 127 (405)
T ss_dssp HHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEE
T ss_pred HHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEE
Confidence 3345556655433211 1233 58899999999999986655434 55554
No 245
>2k42_B Espfu; WAsp, GBD, autoinhibition, cytoplasm, cytoskeleton, disease mutation, phosphoprotein, signaling protein; NMR {Escherichia coli O157}
Probab=44.65 E-value=11 Score=16.86 Aligned_cols=18 Identities=33% Similarity=0.414 Sum_probs=14.2
Q ss_pred CCCCHHHHHHHHHHHHhh
Q psy6206 6 GHCHPAVVKAACTQLALL 23 (83)
Q Consensus 6 Gh~~p~i~~a~~~~~~~~ 23 (83)
||.-|.|.+++.+-+...
T Consensus 1 ~~~LPpIAQaLk~HLAay 18 (36)
T 2k42_B 1 GHMLPDVAQRLMQHLAEH 18 (36)
T ss_dssp CCCCSSHHHHHHHHHHTT
T ss_pred CCCCcHHHHHHHHHHHHH
Confidence 677788999999877653
No 246
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=41.78 E-value=54 Score=23.90 Aligned_cols=37 Identities=11% Similarity=0.018 Sum_probs=22.8
Q ss_pred hHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 32 DNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 32 ~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
....++.+.+.++++.+ ..+++++++++|+..++...
T Consensus 205 g~v~~~ee~la~l~G~d-~~i~~~~Gtt~a~~~~i~al 241 (755)
T 2vyc_A 205 GAFGESEKYAARVFGAD-RSWSVVVGTSGSNRTIMQAC 241 (755)
T ss_dssp HHHHHHHHHHHHHHTCS-EEEEESSHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCC-ceEEECCcHHHHHHHHHHHh
Confidence 44566666667777432 23445555568899888754
No 247
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=41.76 E-value=19 Score=23.53 Aligned_cols=20 Identities=5% Similarity=-0.029 Sum_probs=17.7
Q ss_pred CeEEeeCChHHHHHHHHHHH
Q psy6206 50 SVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 50 ~~v~f~~sGseA~e~Alk~a 69 (83)
+.|.+++++++++..+++..
T Consensus 92 ~~i~~t~G~~~al~~~~~~l 111 (391)
T 3bwn_A 92 RYIVVGTGSTQLCQAAVHAL 111 (391)
T ss_dssp SEEEEEEHHHHHHHHHHHHH
T ss_pred CeEEEeCChHHHHHHHHHHh
Confidence 58999999999999998854
No 248
>3hzu_A Thiosulfate sulfurtransferase SSEA; niaid, ssgcid, infectious disease, transferase structural genomics; 2.10A {Mycobacterium tuberculosis} PDB: 3p3a_A
Probab=40.61 E-value=70 Score=20.46 Aligned_cols=47 Identities=13% Similarity=0.130 Sum_probs=28.7
Q ss_pred HHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 35 VLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 35 ~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
.+|.+.+. -.+.+..-|++|.||.-|..++..+.+. -|-+++..++|
T Consensus 247 ~~l~~~~~-~l~~~~~ivvyC~sG~rs~~a~~~L~~~-~G~~~v~~~~G 293 (318)
T 3hzu_A 247 EELERLYD-FINPDDQTVVYCRIGERSSHTWFVLTHL-LGKADVRNYDG 293 (318)
T ss_dssp HHHHHHTT-TCCTTCCCEEECSSSHHHHHHHHHHHHT-SCCSSCEECTT
T ss_pred HHHHHHhc-CCCCCCcEEEEcCChHHHHHHHHHHHHH-cCCCCeeEeCC
Confidence 35555552 2343455688999999998888777542 24334554443
No 249
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=39.21 E-value=14 Score=23.56 Aligned_cols=32 Identities=19% Similarity=0.138 Sum_probs=21.3
Q ss_pred HHHHHHHHHhhCCCCCCeE--EeeCChHHHHHHH
Q psy6206 34 LVLCARKLASLLPDPLSVC--FFVNSGSEANDLA 65 (83)
Q Consensus 34 ~~~la~~l~~~~p~~~~~v--~f~~sGseA~e~A 65 (83)
..+|.+.+.+....+-+.| .|+-||+.+++++
T Consensus 221 p~~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~ 254 (297)
T 2zig_A 221 PLELAERLVRMFSFVGDVVLDPFAGTGTTLIAAA 254 (297)
T ss_dssp CHHHHHHHHHHHCCTTCEEEETTCTTTHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHH
Confidence 3567777776543333455 7889999888754
No 250
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=39.00 E-value=62 Score=19.36 Aligned_cols=21 Identities=29% Similarity=0.109 Sum_probs=16.4
Q ss_pred eEEeeCChHHHHHHHHHHHHh
Q psy6206 51 VCFFVNSGSEANDLALRLARV 71 (83)
Q Consensus 51 ~v~f~~sGseA~e~Alk~ar~ 71 (83)
...|..||-|+++.|+.-|..
T Consensus 162 ~~vli~sg~eSI~~Ai~eA~~ 182 (196)
T 2q5c_A 162 YGETINSGEESLRRAIEEALN 182 (196)
T ss_dssp EEEECCCCHHHHHHHHHHHHH
T ss_pred cEEEEecCHHHHHHHHHHHHH
Confidence 567778999999888886654
No 251
>1ixs_A Holliday junction DNA helicase RUVA; heterodimeric protein complex, AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ANP; 3.20A {Thermus thermophilus} SCOP: a.5.1.1
Probab=38.56 E-value=11 Score=18.64 Aligned_cols=17 Identities=6% Similarity=0.001 Sum_probs=12.5
Q ss_pred cCCCCCCHHHHHHHHHH
Q psy6206 3 LPVGHCHPAVVKAACTQ 19 (83)
Q Consensus 3 ~~lGh~~p~i~~a~~~~ 19 (83)
.+|||...++.+++.+.
T Consensus 25 ~aLGY~~~ea~kav~~v 41 (62)
T 1ixs_A 25 AALGFKEAQARAVVLDL 41 (62)
T ss_dssp HHTTCCHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHHH
Confidence 36888888888777654
No 252
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=38.35 E-value=11 Score=24.41 Aligned_cols=34 Identities=15% Similarity=0.097 Sum_probs=21.2
Q ss_pred HHHHHHHHHhhCCCCCCeE--EeeCChHHHHHHHHHH
Q psy6206 34 LVLCARKLASLLPDPLSVC--FFVNSGSEANDLALRL 68 (83)
Q Consensus 34 ~~~la~~l~~~~p~~~~~v--~f~~sGseA~e~Alk~ 68 (83)
..+|.+++.+..-.+-+-| .|+-|||.++.+ +++
T Consensus 238 p~~l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa-~~~ 273 (323)
T 1boo_A 238 PAKLPEFFIRMLTEPDDLVVDIFGGSNTTGLVA-ERE 273 (323)
T ss_dssp CTHHHHHHHHHHCCTTCEEEETTCTTCHHHHHH-HHT
T ss_pred CHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHH-HHc
Confidence 3466677766542223444 799999998875 444
No 253
>1t3k_A Arath CDC25, dual-specificity tyrosine phosphatase; cell cycle, phosphorylation, plant, hydrolase; NMR {Arabidopsis thaliana} SCOP: c.46.1.1
Probab=36.93 E-value=58 Score=18.42 Aligned_cols=38 Identities=18% Similarity=0.224 Sum_probs=20.8
Q ss_pred CCCCCeEEeeC-ChHHHHHHHHHHHH------hhcCCCceEEecC
Q psy6206 46 PDPLSVCFFVN-SGSEANDLALRLAR------VHTNNDDVITQDQ 83 (83)
Q Consensus 46 p~~~~~v~f~~-sGseA~e~Alk~ar------~~~~r~~ii~~~~ 83 (83)
+.+..-|+++. +|..+..+|-.+.. ..-|-++|..++|
T Consensus 83 ~~~~~iVvyC~~~G~rs~~aa~~L~~~l~~~L~~~G~~~V~~L~G 127 (152)
T 1t3k_A 83 KDKDTLVFHSALSQVRGPTCARRLVNYLDEKKEDTGIKNIMILER 127 (152)
T ss_dssp CSCCEEEESSSCCSSSHHHHHHHHHHHHHHSSSCCCSSEEEEESS
T ss_pred CCCCEEEEEcCCCCcchHHHHHHHHHHHHHHHHhcCCCcEEEEcC
Confidence 43333456676 78766666655543 1235556666554
No 254
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=36.53 E-value=53 Score=17.98 Aligned_cols=32 Identities=9% Similarity=0.138 Sum_probs=20.5
Q ss_pred CeEEeeCChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 50 SVCFFVNSGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 50 ~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
.-|++|.+|..|..++..+... |-+++..++|
T Consensus 93 ~ivvyC~~G~rs~~aa~~L~~~--G~~~v~~l~G 124 (139)
T 3d1p_A 93 ELIFYCASGKRGGEAQKVASSH--GYSNTSLYPG 124 (139)
T ss_dssp EEEEECSSSHHHHHHHHHHHTT--TCCSEEECTT
T ss_pred eEEEECCCCchHHHHHHHHHHc--CCCCeEEeCC
Confidence 3568888998887776665542 4445655544
No 255
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=35.92 E-value=53 Score=17.72 Aligned_cols=47 Identities=11% Similarity=0.055 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhhCCCCCCeEEeeCChHH--HHHHHHHHHHhhcCCCceEEecC
Q psy6206 33 NLVLCARKLASLLPDPLSVCFFVNSGSE--ANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 33 ~~~~la~~l~~~~p~~~~~v~f~~sGse--A~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
+..++.+.+.++ +.+..-|++|.+|.. |..++..+... |-+ +..++|
T Consensus 57 p~~~l~~~~~~l-~~~~~ivvyC~~g~r~~s~~a~~~L~~~--G~~-v~~l~G 105 (124)
T 3flh_A 57 PAKDLATRIGEL-DPAKTYVVYDWTGGTTLGKTALLVLLSA--GFE-AYELAG 105 (124)
T ss_dssp CHHHHHHHGGGS-CTTSEEEEECSSSSCSHHHHHHHHHHHH--TCE-EEEETT
T ss_pred CHHHHHHHHhcC-CCCCeEEEEeCCCCchHHHHHHHHHHHc--CCe-EEEeCC
Confidence 345666666654 433446788889977 66666666543 333 555443
No 256
>3l51_A Structural maintenance of chromosomes protein 2; structural maintenance of chromosomes (SMC), hinge domain, C cycle, cell division, cytoplasm; 1.51A {Mus musculus}
Probab=35.76 E-value=30 Score=19.98 Aligned_cols=22 Identities=18% Similarity=-0.015 Sum_probs=13.9
Q ss_pred HHHHHHHHHhhcCCCceEEecC
Q psy6206 62 NDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 62 ~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
.+.|.++++....+-++|+.+|
T Consensus 128 l~~A~~~~~~~~~~~r~VTldG 149 (161)
T 3l51_A 128 MDNAKKVAFDKRIMTRTVTLGG 149 (161)
T ss_dssp HHHHHHHHHCTTTCCCEEETTS
T ss_pred HHHHHHHHHhcCCCCeEEeCCC
Confidence 4455566665544667888776
No 257
>2oyy_A Hexameric cytochrome; all helical, unknown function; HET: HEM; 2.50A {Silicibacter pomeroyi}
Probab=35.46 E-value=34 Score=17.76 Aligned_cols=19 Identities=32% Similarity=0.503 Sum_probs=15.2
Q ss_pred eeCChHHHHHHHHHHHHhh
Q psy6206 54 FVNSGSEANDLALRLARVH 72 (83)
Q Consensus 54 f~~sGseA~e~Alk~ar~~ 72 (83)
-+.+=-|.-+.|+|++|..
T Consensus 10 ~T~TPeeG~~LAvklaR~~ 28 (76)
T 2oyy_A 10 VTATPQEGFDLAVKLSRIA 28 (76)
T ss_dssp CCSSHHHHHHHHHHHHHHH
T ss_pred hcCChHHHHHHHHHHHHHH
Confidence 4567778889999999964
No 258
>2lnm_A Protein TIC 40, chloroplastic; translocon, import, TIC40-NP, protein transport; NMR {Arabidopsis thaliana}
Probab=34.74 E-value=40 Score=16.41 Aligned_cols=40 Identities=15% Similarity=0.055 Sum_probs=20.6
Q ss_pred CCHHHHHHHHHHHHhhc-cCCCCcchHHHHHHHHHHhhCCC
Q psy6206 8 CHPAVVKAACTQLALLN-TNNRFLHDNLVLCARKLASLLPD 47 (83)
Q Consensus 8 ~~p~i~~a~~~~~~~~~-~~~~~~~~~~~~la~~l~~~~p~ 47 (83)
.+|++..++.+..+.=. ....+-.+......++|..++++
T Consensus 19 ~dP~~~~~lq~i~~NP~~~~~~~~dP~v~~~~~~L~~~~~g 59 (62)
T 2lnm_A 19 QNPRVQAALMECSENPMNIMKYQNDKEVMDVFNKISQLFPG 59 (62)
T ss_dssp TSHHHHHHHHHHTTCGGGHHHHTTCHHHHHHHHHHHHHSSS
T ss_pred CCHHHHHHHHHHHHCHHHHHHHHhChHHHHHHHHHHHHhCC
Confidence 45666666655332211 11112245556677777777764
No 259
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=34.22 E-value=74 Score=19.08 Aligned_cols=32 Identities=13% Similarity=0.052 Sum_probs=22.8
Q ss_pred CCeEEeeCChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 49 LSVCFFVNSGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 49 ~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
..-|++|.+|..|..++..+... | .++..++|
T Consensus 185 ~~iv~~C~~G~rs~~a~~~L~~~--G-~~v~~~~G 216 (230)
T 2eg4_A 185 QEVGVYCHSGARSAVAFFVLRSL--G-VRARNYLG 216 (230)
T ss_dssp CEEEEECSSSHHHHHHHHHHHHT--T-CEEEECSS
T ss_pred CCEEEEcCChHHHHHHHHHHHHc--C-CCcEEecC
Confidence 34578899999888887776553 5 56766654
No 260
>1uar_A Rhodanese; sulfurtransferase, riken structural genomics/PROT initiative, RSGI, structural genomics, transferase; 1.70A {Thermus thermophilus} SCOP: c.46.1.2 c.46.1.2
Probab=33.56 E-value=86 Score=19.38 Aligned_cols=48 Identities=8% Similarity=0.014 Sum_probs=27.0
Q ss_pred HHHHHHHHhh-CCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 35 VLCARKLASL-LPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 35 ~~la~~l~~~-~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
.++.+.+.+. .+.+..-|++|.+|..|..++..+.. .-|-+++..++|
T Consensus 219 ~~l~~~~~~~g~~~~~~ivvyC~~G~rs~~a~~~L~~-~~G~~~v~~l~G 267 (285)
T 1uar_A 219 EELRALYEPLGITKDKDIVVYCRIAERSSHSWFVLKY-LLGYPHVKNYDG 267 (285)
T ss_dssp HHHHHHHGGGTCCTTSEEEEECSSHHHHHHHHHHHHT-TSCCSCEEEESS
T ss_pred HHHHHHHHHcCCCCCCCEEEECCchHHHHHHHHHHHH-HcCCCCcceeCc
Confidence 3555666553 23333457888899887666555431 235445655544
No 261
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=33.50 E-value=61 Score=21.85 Aligned_cols=48 Identities=23% Similarity=0.232 Sum_probs=30.7
Q ss_pred HHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 33 NLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 33 ~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
+..++.+.+.++ +.+-.-|++|.+|..|..++..+... |-+++..++|
T Consensus 413 p~~~l~~~~~~l-~~~~~vvv~C~~G~ra~~a~~~L~~~--G~~~v~~~~G 460 (474)
T 3tp9_A 413 PLSKLAAHIHDV-PRDGSVCVYCRTGGRSAIAASLLRAH--GVGDVRNMVG 460 (474)
T ss_dssp CHHHHTTTGGGS-CSSSCEEEECSSSHHHHHHHHHHHHH--TCSSEEEETT
T ss_pred CHHHHHHHHhcC-CCCCEEEEECCCCHHHHHHHHHHHHc--CCCCEEEecC
Confidence 344565555553 44445678899999888877776554 5555665554
No 262
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=31.74 E-value=36 Score=21.74 Aligned_cols=63 Identities=21% Similarity=0.277 Sum_probs=38.0
Q ss_pred CCCCCCHHHHHHHHHHHHhhc--------cCCCCcc--hHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh
Q psy6206 4 PVGHCHPAVVKAACTQLALLN--------TNNRFLH--DNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH 72 (83)
Q Consensus 4 ~lGh~~p~i~~a~~~~~~~~~--------~~~~~~~--~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~ 72 (83)
..|.+..++.+.+...+..++ +.+.+.. +.+..+.+.|.+. ..+|..|++.+...|-++|+.+
T Consensus 104 ~~~~s~~ei~~~l~~al~~vP~a~GvnNHmGS~~T~~~~~M~~vm~~L~~~------gL~FlDS~Ts~~S~a~~~A~~~ 176 (261)
T 2qv5_A 104 LAGDPAKVNIDRLHRSMAKITNYTGVMNYLGGRFLAEQSALEPVMRDIGKR------GLLFLDDGSSAQSLSGGIAKAI 176 (261)
T ss_dssp CTTSCHHHHHHHHHHHHTTCCCCSEEEEEECTTGGGCHHHHHHHHHHHHHT------TCEEEECSCCTTCCHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHCCCcEEEecccccchhcCHHHHHHHHHHHHHC------CCEEEcCCCCcccHHHHHHHHc
Confidence 345667888888888888752 2333333 2344455555442 3567777776666666666655
No 263
>2l2o_A UPF0727 protein C6ORF115; HSPC280, winged helix, unknown function; NMR {Homo sapiens}
Probab=31.33 E-value=22 Score=19.17 Aligned_cols=23 Identities=22% Similarity=0.075 Sum_probs=15.8
Q ss_pred ChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 57 SGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 57 sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
.=+||.-..++-||+. ++|.|+|
T Consensus 41 ni~e~LVGtL~~ArK~----k~V~FeG 63 (89)
T 2l2o_A 41 NLFEALVGTLKAAKRR----KIVTYPG 63 (89)
T ss_dssp CCCTTHHHHHHHHHHT----TSEECSC
T ss_pred hHHHHHHHHHHHHHhc----Cceeecc
Confidence 3466777888888764 5677665
No 264
>1okg_A Possible 3-mercaptopyruvate sulfurtransferase; rhodanese, prolyl isomerase, catalytic triad, serine protease, leishmania pyruvate; HET: CSR; 2.10A {Leishmania major} SCOP: c.46.1.2 c.46.1.2 d.26.1.3
Probab=31.09 E-value=91 Score=20.57 Aligned_cols=46 Identities=13% Similarity=-0.029 Sum_probs=26.9
Q ss_pred HHHHHHHhh---CCC---CCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 36 LCARKLASL---LPD---PLSVCFFVNSGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 36 ~la~~l~~~---~p~---~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
+|.+.+.+. .+. +-.-|++|.||..|..++..+... |-+++..++|
T Consensus 228 ~l~~~~~~~~~gi~~~~~d~~ivvyC~sG~rs~~a~~~L~~~--G~~~v~~~~G 279 (373)
T 1okg_A 228 EIRHNIMTVVQGAGDAADLSSFVFSCGSGVTACINIALVHHL--GLGHPYLYCG 279 (373)
T ss_dssp HHHHHHHTTCC-----CCCTTSEEECSSSSTHHHHHHHHHHT--TSCCCEECSS
T ss_pred HHHHHHHhhhcCCCcccCCCCEEEECCchHHHHHHHHHHHHc--CCCCeeEeCC
Confidence 455555553 122 344688999999988877766432 4445555543
No 265
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=30.95 E-value=68 Score=17.45 Aligned_cols=32 Identities=13% Similarity=0.129 Sum_probs=19.7
Q ss_pred CeEEeeCChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 50 SVCFFVNSGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 50 ~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
.-|++|.+|.-|..++..+... |-++|..++|
T Consensus 88 ~ivvyC~~G~rs~~a~~~L~~~--G~~~v~~l~G 119 (139)
T 2hhg_A 88 KFVFYCAGGLRSALAAKTAQDM--GLKPVAHIEG 119 (139)
T ss_dssp EEEEECSSSHHHHHHHHHHHHH--TCCSEEEETT
T ss_pred eEEEECCCChHHHHHHHHHHHc--CCCCeEEecC
Confidence 3578888998777665555432 4445655544
No 266
>3aay_A Putative thiosulfate sulfurtransferase; sulfurtranserase, structural genomics, PSI, structure initiative; 1.90A {Mycobacterium tuberculosis} PDB: 3aax_A 3hwi_A
Probab=30.80 E-value=95 Score=19.07 Aligned_cols=47 Identities=15% Similarity=0.159 Sum_probs=27.7
Q ss_pred HHHHHHHhh-CCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 36 LCARKLASL-LPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 36 ~la~~l~~~-~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
+|.+.+.+. .+.+..-|++|.+|..|..++..+... -|-+++..++|
T Consensus 213 ~l~~~~~~~~~~~~~~iv~yC~~G~rs~~a~~~L~~~-~G~~~v~~l~G 260 (277)
T 3aay_A 213 ELAKLYADAGLDNSKETIAYCRIGERSSHTWFVLREL-LGHQNVKNYDG 260 (277)
T ss_dssp HHHHHHHHHTCCTTSCEEEECSSHHHHHHHHHHHHTT-SCCSCEEEESS
T ss_pred HHHHHHHHcCCCCCCCEEEEcCcHHHHHHHHHHHHHH-cCCCcceeeCc
Confidence 566666543 333345678899999887666555432 24445655544
No 267
>3olh_A MST, 3-mercaptopyruvate sulfurtransferase; structural genomics, structural genomics consortium, SGC, RH fold; 2.50A {Homo sapiens}
Probab=30.44 E-value=80 Score=20.00 Aligned_cols=46 Identities=17% Similarity=0.029 Sum_probs=26.3
Q ss_pred HHHHHHHHhh-CCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEec
Q psy6206 35 VLCARKLASL-LPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQD 82 (83)
Q Consensus 35 ~~la~~l~~~-~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~ 82 (83)
.++.+.+.+. .+.+..-|++|.||..|..++..+.. -|-+++..++
T Consensus 240 ~~l~~~~~~~~~~~~~~iv~yC~sG~rs~~a~~~L~~--~G~~~v~~~~ 286 (302)
T 3olh_A 240 EEIRHLFQEKKVDLSKPLVATCGSGVTACHVALGAYL--CGKPDVPIYD 286 (302)
T ss_dssp HHHHHHHHHTTCCTTSCEEEECSSSSTTHHHHHHHHT--TTCCCCCEES
T ss_pred HHHHHHHHhcCCCCCCCEEEECCChHHHHHHHHHHHH--cCCCCeeEeC
Confidence 4555555543 33334467889999888777665432 2444454444
No 268
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=29.79 E-value=59 Score=18.61 Aligned_cols=23 Identities=9% Similarity=-0.029 Sum_probs=15.8
Q ss_pred HHHHHHHHHHHHh-hcCCCceEEe
Q psy6206 59 SEANDLALRLARV-HTNNDDVITQ 81 (83)
Q Consensus 59 seA~e~Alk~ar~-~~~r~~ii~~ 81 (83)
.++++++++..+. +.+++.++.|
T Consensus 47 P~si~a~l~al~~~~~~~riivvf 70 (163)
T 3mvn_A 47 PTAITATIDALRAKVGQQRILAVL 70 (163)
T ss_dssp HHHHHHHHHHHHHHHTTSCEEEEE
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEE
Confidence 6778888887775 5655555555
No 269
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=29.46 E-value=64 Score=20.94 Aligned_cols=34 Identities=9% Similarity=0.085 Sum_probs=23.0
Q ss_pred HHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHH
Q psy6206 36 LCARKLASLLPDPLSVCFFVNSGSEANDLALRLA 69 (83)
Q Consensus 36 ~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~a 69 (83)
++.+.+.+.++++.+.|+=+.++.++.+.++++.
T Consensus 219 ~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l 252 (371)
T 3gqv_A 219 NLAQTIRTYTKNNLRYALDCITNVESTTFCFAAI 252 (371)
T ss_dssp THHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHS
T ss_pred hHHHHHHHHccCCccEEEECCCchHHHHHHHHHh
Confidence 3556666777766665555555568889988865
No 270
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=29.36 E-value=32 Score=23.00 Aligned_cols=37 Identities=14% Similarity=-0.158 Sum_probs=25.5
Q ss_pred HHHHHHHHhhCCCC-CCeE--EeeCChHHHHHHHHHHHHh
Q psy6206 35 VLCARKLASLLPDP-LSVC--FFVNSGSEANDLALRLARV 71 (83)
Q Consensus 35 ~~la~~l~~~~p~~-~~~v--~f~~sGseA~e~Alk~ar~ 71 (83)
..||..|...++-. ...+ -||-||+-++|+|+..+..
T Consensus 180 e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~i 219 (384)
T 3ldg_A 180 ENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNI 219 (384)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCc
Confidence 56777777766421 2233 5788999999999876543
No 271
>1gxj_A SMC, chromosome segregation SMC protein; SMC dimerisation domain, anti parallel coiled coil, SMC proteins; 2.0A {Thermotoga maritima} SCOP: d.215.1.1 PDB: 1gxk_A
Probab=29.06 E-value=50 Score=19.12 Aligned_cols=22 Identities=27% Similarity=0.244 Sum_probs=14.8
Q ss_pred HHHHHHHHHhhcCCCceEEecC
Q psy6206 62 NDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 62 ~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
.+.|.++++....+.++|+.+|
T Consensus 139 l~~A~~l~~~~~~~~~~VTldG 160 (186)
T 1gxj_A 139 LDDAIRMKKKYRLNTRIATLDG 160 (186)
T ss_dssp HHHHHHHHHHHTCCSCEEETTS
T ss_pred HHHHHHHHHhcCCCceEEeCCC
Confidence 3566666666556667888776
No 272
>2drn_C 24-residues peptide from AN A-kinase anchoring protein; AKAP, PKA, signal transduction, 4-helix bundle, helix- loop-helix; NMR {Rattus norvegicus}
Probab=28.52 E-value=38 Score=13.77 Aligned_cols=13 Identities=23% Similarity=0.284 Sum_probs=9.1
Q ss_pred HHHHHHHHHHHHh
Q psy6206 10 PAVVKAACTQLAL 22 (83)
Q Consensus 10 p~i~~a~~~~~~~ 22 (83)
-+|++++.+|...
T Consensus 8 ~RIVdaVi~qvka 20 (26)
T 2drn_C 8 SRIVDAVIEQVKA 20 (26)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHh
Confidence 3678888887754
No 273
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=28.50 E-value=64 Score=16.34 Aligned_cols=45 Identities=16% Similarity=0.161 Sum_probs=25.7
Q ss_pred HHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 34 LVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 34 ~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
..++.+.+.+ +|. ..-|++|.+|.-|..++..+... |-+ +..++|
T Consensus 41 ~~~l~~~~~~-l~~-~~ivvyC~~g~rs~~a~~~L~~~--G~~-v~~l~G 85 (94)
T 1wv9_A 41 LEKIQKGEHG-LPR-RPLLLVCEKGLLSQVAALYLEAE--GYE-AMSLEG 85 (94)
T ss_dssp HHHHTTTCCC-CCS-SCEEEECSSSHHHHHHHHHHHHH--TCC-EEEETT
T ss_pred HHHHHHHHHh-CCC-CCEEEEcCCCChHHHHHHHHHHc--CCc-EEEEcc
Confidence 3444444433 344 44678889998877776665443 444 555543
No 274
>2wlr_A Putative thiosulfate sulfurtransferase YNJE; rhodanese domains; HET: EPE; 1.45A {Escherichia coli} PDB: 2wlx_A* 3ipo_A* 3ipp_A
Probab=28.27 E-value=1.3e+02 Score=19.93 Aligned_cols=47 Identities=17% Similarity=0.058 Sum_probs=28.1
Q ss_pred HHHHHHHHhh-CCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 35 VLCARKLASL-LPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 35 ~~la~~l~~~-~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
.+|.+.+.+. .+.+..-|++|.+|.-|..++..+... |-+++..++|
T Consensus 189 ~~l~~~~~~~gi~~~~~ivvyC~~G~~a~~~~~~L~~~--G~~~v~~l~G 236 (423)
T 2wlr_A 189 EQLKAMLAKHGIRHDTTVILYGRDVYAAARVAQIMLYA--GVKDVRLLDG 236 (423)
T ss_dssp HHHHHHHHHTTCCTTSEEEEECSSHHHHHHHHHHHHHH--TCSCEEEETT
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCchHHHHHHHHHHHc--CCCCeEEECC
Confidence 4566666543 232333577888998888777766543 5545655543
No 275
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=28.26 E-value=57 Score=21.19 Aligned_cols=36 Identities=11% Similarity=0.018 Sum_probs=23.4
Q ss_pred HHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHh
Q psy6206 36 LCARKLASLLPDPLSVCFFVNSGSEANDLALRLARV 71 (83)
Q Consensus 36 ~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~ 71 (83)
.+.+.+.+.++++.+.|+=+.++.++.+.++++.+.
T Consensus 251 ~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~ 286 (378)
T 3uko_A 251 PIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHK 286 (378)
T ss_dssp CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCT
T ss_pred hHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhc
Confidence 355666666766566555555555788999887654
No 276
>1rr7_A Middle operon regulator; MOR, transcription; 2.20A {Enterobacteria phage MU} SCOP: a.4.1.14
Probab=27.69 E-value=47 Score=18.74 Aligned_cols=17 Identities=0% Similarity=0.163 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHhhcCC
Q psy6206 59 SEANDLALRLARVHTNN 75 (83)
Q Consensus 59 seA~e~Alk~ar~~~~r 75 (83)
.++++.+.+++..|.|.
T Consensus 51 ~~~ie~~~~L~~~~gG~ 67 (129)
T 1rr7_A 51 AHSLEIVVAICKHLGGG 67 (129)
T ss_dssp TSHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHHCCe
Confidence 34445566666655543
No 277
>2nly_A BH1492 protein, divergent polysaccharide deacetylase hypothetical; PFAM04748, structural PSI, protein structure initiative; 2.50A {Bacillus halodurans} SCOP: c.6.2.7
Probab=27.55 E-value=51 Score=20.79 Aligned_cols=64 Identities=11% Similarity=0.131 Sum_probs=35.6
Q ss_pred cCCCCCCHHHHHHHHHHHHhhc--------cCCCCcc--hHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh
Q psy6206 3 LPVGHCHPAVVKAACTQLALLN--------TNNRFLH--DNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH 72 (83)
Q Consensus 3 ~~lGh~~p~i~~a~~~~~~~~~--------~~~~~~~--~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~ 72 (83)
+..|.+..++.+.+...+..++ +.+.+.. +.+..+.+.|.+. ..+|..|++-+...|-++|+..
T Consensus 76 L~~~~s~~ei~~~l~~al~~vP~a~GvnNHmGS~~T~~~~~m~~vm~~l~~~------gL~fvDS~Ts~~S~a~~~A~~~ 149 (245)
T 2nly_A 76 ITSNLSVGEVKSRVRKAFDDIPYAVGLNNHMGSKIVENEKIMRAILEVVKEK------NAFIIDSGTSPHSLIPQLAEEL 149 (245)
T ss_dssp BCTTCCHHHHHHHHHHHHHHSTTCCEEEEEECTTGGGCHHHHHHHHHHHHHT------TCEEEECCCCSSCSHHHHHHHT
T ss_pred CcCCCCHHHHHHHHHHHHHHCCCcEEEecccccchhcCHHHHHHHHHHHHHC------CCEEEcCCCCcccHHHHHHHHc
Confidence 3446667788888888888752 2333332 2334454444441 2556666655555555555554
No 278
>1e0c_A Rhodanese, sulfurtransferase; sulfur metabolism, thiosulfate:cyanide sulfurtransferase; 1.8A {Azotobacter vinelandii} SCOP: c.46.1.2 c.46.1.2 PDB: 1h4k_X 1h4m_X
Probab=26.19 E-value=1.2e+02 Score=18.58 Aligned_cols=47 Identities=11% Similarity=0.012 Sum_probs=24.2
Q ss_pred HHHHHHHHhh-CCCCCCeEEeeCChH-HHHHHHHHHHHhhcCCCceEEecC
Q psy6206 35 VLCARKLASL-LPDPLSVCFFVNSGS-EANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 35 ~~la~~l~~~-~p~~~~~v~f~~sGs-eA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
..+.+.+.+. .+.+..-|++|.+|. .+-.++-.+ +.. |-++|..++|
T Consensus 67 ~~~~~~~~~~gi~~~~~vvvyc~~g~~~s~~a~~~L-~~~-G~~~v~~L~G 115 (271)
T 1e0c_A 67 EQLESLFGELGHRPEAVYVVYDDEGGGWAGRFIWLL-DVI-GQQRYHYLNG 115 (271)
T ss_dssp HHHHHHHHHHTCCTTCEEEEECSSSSHHHHHHHHHH-HHT-TCCCEEEETT
T ss_pred HHHHHHHHHcCCCCCCeEEEEcCCCCccHHHHHHHH-HHc-CCCCeEEecC
Confidence 3566666664 333333567777776 555444333 222 4445555543
No 279
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=26.10 E-value=89 Score=17.21 Aligned_cols=36 Identities=11% Similarity=0.110 Sum_probs=22.4
Q ss_pred CCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 46 PDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 46 p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
+.+-.-|++|.+|..|..++..+... |-+++..++|
T Consensus 80 ~~~~~ivvyC~~G~rS~~aa~~L~~~--G~~~v~~l~G 115 (137)
T 1qxn_A 80 DPEKPVVVFCKTAARAALAGKTLREY--GFKTIYNSEG 115 (137)
T ss_dssp CTTSCEEEECCSSSCHHHHHHHHHHH--TCSCEEEESS
T ss_pred CCCCeEEEEcCCCcHHHHHHHHHHHc--CCcceEEEcC
Confidence 43445678899998877766665432 4445555543
No 280
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=26.07 E-value=81 Score=16.75 Aligned_cols=45 Identities=11% Similarity=0.113 Sum_probs=23.7
Q ss_pred HHHHHHHhhCCCCCCeEEee-CChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 36 LCARKLASLLPDPLSVCFFV-NSGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 36 ~la~~l~~~~p~~~~~v~f~-~sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
++.+.+.++.+.+..-|++| .+|..|..++..+... |- ++..++|
T Consensus 77 ~~~~~~~~~~~~~~~ivvyC~~~G~rs~~a~~~L~~~--G~-~v~~l~G 122 (134)
T 3g5j_A 77 DIYLQAAELALNYDNIVIYCARGGMRSGSIVNLLSSL--GV-NVYQLEG 122 (134)
T ss_dssp HHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHHHT--TC-CCEEETT
T ss_pred HHHHHHHHhccCCCeEEEEECCCChHHHHHHHHHHHc--CC-ceEEEeC
Confidence 45555555432213345666 4888877766665433 33 4554443
No 281
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=25.27 E-value=94 Score=20.26 Aligned_cols=22 Identities=14% Similarity=0.170 Sum_probs=16.9
Q ss_pred CCeEEeeCChH---HHHHHHHHHHH
Q psy6206 49 LSVCFFVNSGS---EANDLALRLAR 70 (83)
Q Consensus 49 ~~~v~f~~sGs---eA~e~Alk~ar 70 (83)
.++++|..+|. -|.|.|+|+-.
T Consensus 208 ~~~~~~lGrG~~~~~A~E~ALKlkE 232 (352)
T 3g68_A 208 SKEIRIIGHSDIYGDTLEAALKLLE 232 (352)
T ss_dssp CCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCCHHHHHHHHHHHHH
Confidence 56888887765 67899999754
No 282
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=24.64 E-value=67 Score=21.54 Aligned_cols=37 Identities=14% Similarity=0.117 Sum_probs=26.3
Q ss_pred HHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHh
Q psy6206 35 VLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARV 71 (83)
Q Consensus 35 ~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~ 71 (83)
..+.+.+.+.+++..-.+.|-++|.+..+.++++.+.
T Consensus 300 ~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l~~ 336 (456)
T 3krt_A 300 KRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRK 336 (456)
T ss_dssp HHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHHEEE
T ss_pred HHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHHhhC
Confidence 4566777777764333567778888999999987654
No 283
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=23.82 E-value=47 Score=22.20 Aligned_cols=37 Identities=19% Similarity=-0.085 Sum_probs=25.8
Q ss_pred HHHHHHHHHhhCCCC-CCeE--EeeCChHHHHHHHHHHHH
Q psy6206 34 LVLCARKLASLLPDP-LSVC--FFVNSGSEANDLALRLAR 70 (83)
Q Consensus 34 ~~~la~~l~~~~p~~-~~~v--~f~~sGseA~e~Alk~ar 70 (83)
...++..|...++-. ...+ -+|-||+-++|+|+..+.
T Consensus 186 ~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~ 225 (393)
T 3k0b_A 186 KETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQN 225 (393)
T ss_dssp CHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcC
Confidence 356777777776422 2233 578899999999987654
No 284
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=23.49 E-value=92 Score=16.43 Aligned_cols=22 Identities=9% Similarity=0.231 Sum_probs=16.5
Q ss_pred CeEEeeCChHHHHHHHHHHHHh
Q psy6206 50 SVCFFVNSGSEANDLALRLARV 71 (83)
Q Consensus 50 ~~v~f~~sGseA~e~Alk~ar~ 71 (83)
.-|++|.+|..+..++..+.+.
T Consensus 74 ~ivv~C~~G~rs~~a~~~L~~~ 95 (127)
T 3i2v_A 74 PIYVICKLGNDSQKAVKILQSL 95 (127)
T ss_dssp EEEEECSSSSHHHHHHHHHHHH
T ss_pred eEEEEcCCCCcHHHHHHHHHHh
Confidence 3568888999888777776655
No 285
>1yt8_A Thiosulfate sulfurtransferase; rhodanase domains, cyanide detoxification, structural genomics, PSI, protein structure initiative; 1.90A {Pseudomonas aeruginosa} SCOP: c.46.1.2 c.46.1.2 c.46.1.2 c.46.1.2
Probab=23.44 E-value=1.4e+02 Score=20.54 Aligned_cols=45 Identities=13% Similarity=0.027 Sum_probs=27.3
Q ss_pred HHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhhcCCCceEEecC
Q psy6206 36 LCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 36 ~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
+|.+.+.++ +.+-.-|++|.||.-|..++..+... |-+++..++|
T Consensus 419 ~l~~~l~~l-~~~~~ivv~C~sG~rs~~aa~~L~~~--G~~~v~~l~G 463 (539)
T 1yt8_A 419 QLKQALERL-GTAERYVLTCGSSLLARFAVAEVQAL--SGKPVFLLDG 463 (539)
T ss_dssp GHHHHHHHH-CCCSEEEEECSSSHHHHHHHHHHHHH--HCSCEEEETT
T ss_pred HHHHHHHhC-CCCCeEEEEeCCChHHHHHHHHHHHc--CCCCEEEeCC
Confidence 455555554 43344678889999888777666543 3334555543
No 286
>3odp_A Putative tagatose-6-phosphate ketose/aldose isome; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE PG4; 2.35A {Clostridium novyi}
Probab=22.69 E-value=1.7e+02 Score=19.53 Aligned_cols=25 Identities=12% Similarity=0.282 Sum_probs=19.7
Q ss_pred CCCeEEeeCCh---HHHHHHHHHHHHhh
Q psy6206 48 PLSVCFFVNSG---SEANDLALRLARVH 72 (83)
Q Consensus 48 ~~~~v~f~~sG---seA~e~Alk~ar~~ 72 (83)
+.++++|..+| .-|.|.|+|+--..
T Consensus 229 ~~~~~~~lGrG~~~~~A~E~ALKlkE~s 256 (393)
T 3odp_A 229 KFKRTVYLGAANAFGLAKESALKVLELT 256 (393)
T ss_dssp CCSEEEEECCTHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEEeCCcCHHHHHHHHHHHHHHh
Confidence 46789999988 46889999986543
No 287
>3l51_B Structural maintenance of chromosomes protein 4; structural maintenance of chromosomes (SMC), hinge domain, C cycle, cell division, cytoplasm; 1.51A {Mus musculus} SCOP: d.215.1.0
Probab=22.58 E-value=46 Score=19.33 Aligned_cols=22 Identities=27% Similarity=0.151 Sum_probs=12.8
Q ss_pred HHHHHHHHHhhcCCCceEEecC
Q psy6206 62 NDLALRLARVHTNNDDVITQDQ 83 (83)
Q Consensus 62 ~e~Alk~ar~~~~r~~ii~~~~ 83 (83)
.+.|.++++....+-++|+.+|
T Consensus 125 l~~A~~~~~~~~~~~r~VTldG 146 (166)
T 3l51_B 125 LDQATRVAYQRDRRWRVVTLQG 146 (166)
T ss_dssp HHHHHHHHBCSSCBCCEEETTS
T ss_pred HHHHHHHHHhhCCCcEEEECCC
Confidence 3444555554445567887765
No 288
>1q02_A Sequestosome 1; helical bundle, protein binding; NMR {Homo sapiens} SCOP: a.5.2.1 PDB: 2jy7_A 2jy8_A 2k0b_X 2knv_A 2rru_A 3b0f_A
Probab=22.42 E-value=78 Score=15.23 Aligned_cols=16 Identities=6% Similarity=0.349 Sum_probs=11.3
Q ss_pred CCCHHHHHHHHHHHHhh
Q psy6206 7 HCHPAVVKAACTQLALL 23 (83)
Q Consensus 7 h~~p~i~~a~~~~~~~~ 23 (83)
|.+|+|.+++.+ +..+
T Consensus 5 ~~D~rl~~al~q-Ml~M 20 (52)
T 1q02_A 5 EADPRLIESLSQ-MLSM 20 (52)
T ss_dssp TSCHHHHHHHHH-HHTT
T ss_pred CcChHHHHHHHH-HHHc
Confidence 778999988854 4443
No 289
>2g9p_A Antimicrobial peptide latarcin 2A; helix-hinge-helix, antimicrobial protein; NMR {Synthetic}
Probab=22.23 E-value=35 Score=13.62 Aligned_cols=13 Identities=38% Similarity=0.503 Sum_probs=8.1
Q ss_pred hHHHHHHHHHHHH
Q psy6206 58 GSEANDLALRLAR 70 (83)
Q Consensus 58 GseA~e~Alk~ar 70 (83)
|..|+.-|+|-||
T Consensus 11 grkaisyavkkar 23 (26)
T 2g9p_A 11 GRKAISYAVKKAR 23 (26)
T ss_dssp TSHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHc
Confidence 4566777776554
No 290
>2qv6_A MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY; HET: GTP; 2.00A {Methanocaldococcus jannaschii}
Probab=22.06 E-value=1.6e+02 Score=18.84 Aligned_cols=74 Identities=12% Similarity=0.007 Sum_probs=51.5
Q ss_pred CccCCCCCCHHHHHHHHHHHHh----h---------c--------cCCCCcchHHHHHHHHHHhhCCCCCCe-EEeeCCh
Q psy6206 1 MSLPVGHCHPAVVKAACTQLAL----L---------N--------TNNRFLHDNLVLCARKLASLLPDPLSV-CFFVNSG 58 (83)
Q Consensus 1 ~~~~lGh~~p~i~~a~~~~~~~----~---------~--------~~~~~~~~~~~~la~~l~~~~p~~~~~-v~f~~sG 58 (83)
|+..+|+..+...+.++..+-. . + ..++...+...++-++|.+..|-+.+. +-...+=
T Consensus 15 WT~t~g~~RE~~lQ~lQs~l~~~l~~~~~~~~g~~f~~R~D~~ia~tngi~~~~h~~i~~~i~~~~Pv~vs~~~g~~~tP 94 (268)
T 2qv6_A 15 WTVTPNPRRESDLQALQSRLYADLNLMFGAHKGLVFYTRFDNLIAITNGIDLITHKRIQESIRNRYPFTVSMVIASAETP 94 (268)
T ss_dssp HHHSSSCCCHHHHHHHHHHHHHHHHHHHHTTTCEEECTTSSEEEEECTTCCHHHHHHHHHHHHHHSSSCEEEEEEEESSH
T ss_pred ccCCCCchhHHHHHHHHHHHHHHHHHHHHhcCCEEeecccceEEEEeCCCCHHHHHHHHHHHhhcCCceEEEEEEecCCH
Confidence 6788999998888877664422 1 0 112233456678889999999976664 4556788
Q ss_pred HHHHHHHHHHHHhhcC
Q psy6206 59 SEANDLALRLARVHTN 74 (83)
Q Consensus 59 seA~e~Alk~ar~~~~ 74 (83)
-||...|-+......+
T Consensus 95 ~~A~~~A~~~~~~~~~ 110 (268)
T 2qv6_A 95 YEAQKLATETLQEYGS 110 (268)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhhcCC
Confidence 8999998887766654
No 291
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=21.91 E-value=1e+02 Score=16.34 Aligned_cols=22 Identities=23% Similarity=0.327 Sum_probs=14.6
Q ss_pred CCeEEeeCChHHHHHHHHHHHH
Q psy6206 49 LSVCFFVNSGSEANDLALRLAR 70 (83)
Q Consensus 49 ~~~v~f~~sGseA~e~Alk~ar 70 (83)
+.++.+...|++..+.|++.|.
T Consensus 2 ~~~ILv~~D~s~~s~~al~~a~ 23 (137)
T 2z08_A 2 FKTILLAYDGSEHARRAAEVAK 23 (137)
T ss_dssp CSEEEEECCSSHHHHHHHHHHH
T ss_pred cceEEEEeCCCHHHHHHHHHHH
Confidence 3577788888777666666443
No 292
>1v9v_A KIAA0561 protein; helix bundle, MAST205, microtubule-associated serine/threonine protein kinase, structural genomics; NMR {Homo sapiens} SCOP: a.29.10.1
Probab=21.28 E-value=1e+02 Score=17.24 Aligned_cols=55 Identities=24% Similarity=0.212 Sum_probs=27.9
Q ss_pred CHHHHHHHHHHHHhhc---cCCCCcchHHHHHHHHHHhhCCCCCCeEEeeCChHHHHHHHHHHHHhh
Q psy6206 9 HPAVVKAACTQLALLN---TNNRFLHDNLVLCARKLASLLPDPLSVCFFVNSGSEANDLALRLARVH 72 (83)
Q Consensus 9 ~p~i~~a~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~Alk~ar~~ 72 (83)
|.+|++...+.+++-. ..+.|+.+....|.+.|.+.- -.|.++.+.--.+++++.
T Consensus 42 HHQiiElARDCL~KSr~~LITsrYF~El~E~LEkLl~ea~---------erSes~~~~~v~~lvkKl 99 (114)
T 1v9v_A 42 HHQIVELARDCLAKSGENLVTSRYFLEMQEKLERLLQDAH---------ERSDSEEVSFIVQLVRKL 99 (114)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHH---------HTSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHh---------hcCchhhhHHHHHHHHHH
Confidence 5667777777776631 112333344444444443321 234566666666666653
No 293
>1c25_A CDC25A; hydrolase, cell cycle phosphatase,dual specificity protein phosphatase, CDK2; 2.30A {Homo sapiens} SCOP: c.46.1.1
Probab=20.05 E-value=1.3e+02 Score=16.82 Aligned_cols=32 Identities=6% Similarity=0.099 Sum_probs=19.5
Q ss_pred EEeeC-ChHHHHHHHHHHHHh--------hcCCCceEEecC
Q psy6206 52 CFFVN-SGSEANDLALRLARV--------HTNNDDVITQDQ 83 (83)
Q Consensus 52 v~f~~-sGseA~e~Alk~ar~--------~~~r~~ii~~~~ 83 (83)
|++|. +|.-+-.+|-.+... .-|-.+|..++|
T Consensus 93 v~yC~~sg~rs~~aa~~L~~~~~~~~~l~~~G~~~v~~l~G 133 (161)
T 1c25_A 93 VFHCEFSSERGPRMCRYVRERDRLGNEYPKLHYPELYVLKG 133 (161)
T ss_dssp EEECSSSSSHHHHHHHHHHHHHHHTSSTTCCSSCCEEEETT
T ss_pred EEEcCCCCcchHHHHHHHHHHHHhhhhccccCCceEEEEcC
Confidence 35677 888888777666543 124445665554
Done!