Query psy6207
Match_columns 823
No_of_seqs 584 out of 3012
Neff 8.3
Searched_HMMs 29240
Date Fri Aug 16 20:28:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6207.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6207hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fbr_A Lectin, myxobacterial h 99.8 7E-23 2.4E-27 209.9 -17.1 235 461-822 7-265 (267)
2 2ygq_A WIF-1, WNT inhibitory f 99.8 2.9E-19 1E-23 192.7 8.5 161 5-249 149-311 (324)
3 4fbr_A Lectin, myxobacterial h 99.8 1.2E-22 4E-27 208.3 -18.9 240 406-779 12-265 (267)
4 2gy5_A Angiopoietin-1 receptor 99.7 5.9E-19 2E-23 196.9 7.3 181 554-784 138-321 (423)
5 2ygq_A WIF-1, WNT inhibitory f 99.7 1.9E-18 6.7E-23 186.3 6.9 159 438-663 154-312 (324)
6 2vj2_A Jagged-1; signalling, p 99.7 1.1E-18 3.6E-23 170.9 2.6 152 464-659 14-169 (169)
7 2gy5_A Angiopoietin-1 receptor 99.7 6.1E-18 2.1E-22 188.7 8.9 191 145-373 185-380 (423)
8 2vj2_A Jagged-1; signalling, p 99.7 7E-18 2.4E-22 165.1 3.0 141 59-246 20-169 (169)
9 3fcs_B Integrin beta-3; beta p 99.6 4.5E-15 1.5E-19 173.6 12.8 169 438-659 441-628 (690)
10 1klo_A Laminin; glycoprotein; 99.5 1.3E-15 4.5E-20 147.4 3.4 123 175-300 1-156 (162)
11 2vj3_A Neurogenic locus notch 99.5 6.4E-15 2.2E-19 138.5 7.9 112 430-572 5-121 (135)
12 3fcs_B Integrin beta-3; beta p 99.5 1.9E-14 6.5E-19 168.4 11.0 139 498-659 441-600 (690)
13 2vj3_A Neurogenic locus notch 99.5 3.5E-14 1.2E-18 133.5 9.7 108 535-660 5-120 (135)
14 4aqs_A Laminin subunit beta-1; 99.5 1E-14 3.5E-19 168.6 6.7 209 73-289 254-525 (525)
15 1z1y_A Ookinete surface protei 99.5 3.2E-15 1.1E-19 148.8 1.8 141 543-741 12-176 (186)
16 4d90_A EGF-like repeat and dis 99.5 6.1E-14 2.1E-18 133.3 9.8 121 625-784 1-134 (143)
17 1klo_A Laminin; glycoprotein; 99.5 8.1E-15 2.8E-19 141.9 3.6 123 218-343 1-156 (162)
18 1z1y_A Ookinete surface protei 99.5 1.1E-14 3.8E-19 144.9 2.6 140 583-784 9-176 (186)
19 4d90_A EGF-like repeat and dis 99.4 2.4E-13 8.1E-18 129.1 10.4 113 536-660 1-134 (143)
20 4aqs_A Laminin subunit beta-1; 99.4 1.1E-13 3.8E-18 159.9 7.4 226 273-570 278-525 (525)
21 3k6s_B Integrin beta-2; cell r 99.4 2.4E-13 8E-18 158.6 7.2 171 133-335 434-626 (687)
22 3k6s_B Integrin beta-2; cell r 99.3 6.3E-13 2.1E-17 155.0 5.4 171 437-662 435-626 (687)
23 2bou_A EGF-like module contain 99.1 1.5E-11 5.1E-16 116.7 4.1 107 498-619 8-138 (143)
24 2bou_A EGF-like module contain 99.1 5.2E-11 1.8E-15 112.9 7.7 122 632-787 8-138 (143)
25 1tpg_A T-plasminogen activator 99.1 6.2E-11 2.1E-15 102.8 5.1 84 466-573 1-89 (91)
26 1uzk_A Fibrillin-1; glycoprote 99.0 1E-11 3.5E-16 120.4 -5.8 133 490-658 3-158 (162)
27 1yo8_A Thrombospondin-2; EGF, 98.9 1.4E-09 4.8E-14 125.5 9.4 148 579-776 4-177 (634)
28 1tpg_A T-plasminogen activator 98.9 8.5E-10 2.9E-14 95.6 5.7 82 511-616 1-87 (91)
29 1yo8_A Thrombospondin-2; EGF, 98.9 1.1E-09 3.7E-14 126.4 8.0 137 490-652 3-177 (634)
30 1dx5_I Thrombomodulin; serine 98.8 1.1E-09 3.7E-14 100.0 3.2 87 710-822 15-111 (118)
31 1dx5_I Thrombomodulin; serine 98.8 5.2E-10 1.8E-14 102.1 -1.2 98 430-567 4-112 (118)
32 1n7d_A LDL receptor, low-densi 98.8 4.8E-07 1.6E-11 108.1 24.1 166 348-566 182-365 (699)
33 2w86_A Fibrillin-1, fibrillin1 98.7 8.9E-10 3E-14 104.8 -1.7 128 535-738 4-142 (147)
34 1uzk_A Fibrillin-1; glycoprote 98.7 3.1E-09 1.1E-13 102.8 0.2 122 579-739 4-158 (162)
35 2p28_B Integrin beta-2; hybrid 98.6 1.2E-08 4.3E-13 102.6 4.0 100 543-659 97-214 (217)
36 1n7d_A LDL receptor, low-densi 98.6 1.7E-06 5.9E-11 103.2 21.8 163 498-736 182-365 (699)
37 2w86_A Fibrillin-1, fibrillin1 98.6 4.2E-09 1.4E-13 100.2 -0.9 110 687-822 4-140 (147)
38 2p28_B Integrin beta-2; hybrid 98.6 6.3E-08 2.2E-12 97.4 6.9 108 632-783 97-214 (217)
39 1aut_L Activated protein C; se 98.4 3.3E-07 1.1E-11 82.8 6.5 94 624-766 6-109 (114)
40 1aut_L Activated protein C; se 98.3 2.2E-07 7.4E-12 84.1 3.6 83 695-809 22-109 (114)
41 1emn_A Fibrillin; extracellula 98.3 2.9E-07 9.9E-12 77.9 3.1 69 430-524 5-77 (82)
42 3zyj_B Netrin-G1; cell adhesio 98.3 3.1E-07 1.1E-11 100.4 3.2 116 72-238 296-419 (426)
43 1emn_A Fibrillin; extracellula 98.2 6.4E-07 2.2E-11 75.7 4.4 69 624-737 5-77 (82)
44 1x7a_L Coagulation factor IX, 98.2 1.4E-06 4.8E-11 82.3 5.4 69 535-615 48-126 (146)
45 3zyj_B Netrin-G1; cell adhesio 98.1 7.5E-07 2.6E-11 97.4 2.5 104 144-281 312-419 (426)
46 2c4f_L Coagulation factor VII 98.1 1.7E-06 5.8E-11 81.4 3.8 73 687-783 47-129 (142)
47 1x7a_L Coagulation factor IX, 98.1 2.2E-06 7.4E-11 81.0 4.4 69 689-783 50-126 (146)
48 1nfu_B Coagulation factor XA, 98.0 2.4E-06 8.3E-11 84.2 4.3 75 624-741 42-122 (195)
49 2wg3_C Hedgehog-interacting pr 98.0 7.3E-07 2.5E-11 100.7 0.3 77 89-203 379-455 (463)
50 2c4f_L Coagulation factor VII 98.0 2.8E-06 9.7E-11 79.9 3.9 72 535-616 47-130 (142)
51 3u7u_G Neuregulin 1; signaling 98.0 2.6E-06 9E-11 65.4 2.7 45 522-573 1-52 (55)
52 2vh0_B Activated factor XA lig 98.0 2.7E-06 9.3E-11 79.1 3.1 75 624-741 42-122 (134)
53 3u7u_G Neuregulin 1; signaling 98.0 2.8E-06 9.6E-11 65.3 2.6 43 610-660 1-50 (55)
54 1z6c_A Vitamin K-dependent pro 97.9 6.6E-06 2.3E-10 70.3 4.2 53 710-783 17-78 (87)
55 1lmj_A Fibrillin 1; EGF, calci 97.9 6.7E-06 2.3E-10 70.1 4.1 56 710-780 17-80 (86)
56 1nfu_B Coagulation factor XA, 97.9 2.2E-06 7.6E-11 84.5 0.5 71 690-784 45-122 (195)
57 3m0c_C LDL receptor, low-densi 97.8 1E-05 3.5E-10 97.3 5.7 158 505-736 204-383 (791)
58 3m0c_C LDL receptor, low-densi 97.8 1.1E-05 3.8E-10 97.0 5.9 159 354-565 204-382 (791)
59 1z6c_A Vitamin K-dependent pro 97.8 6.2E-06 2.1E-10 70.5 2.5 67 490-570 3-78 (87)
60 2w2n_E LDL receptor, low-densi 97.8 6.7E-06 2.3E-10 73.2 2.6 76 517-613 19-102 (107)
61 1lmj_A Fibrillin 1; EGF, calci 97.8 1E-05 3.4E-10 69.0 3.0 75 624-737 3-80 (86)
62 3h5c_B Vitamin K-dependent pro 97.8 2.5E-05 8.4E-10 83.9 6.4 74 535-619 5-84 (317)
63 2vh0_B Activated factor XA lig 97.7 3.5E-06 1.2E-10 78.4 -0.3 70 690-783 45-121 (134)
64 2wg3_C Hedgehog-interacting pr 97.7 5.7E-06 2E-10 93.4 0.7 80 512-616 377-456 (463)
65 2w2n_E LDL receptor, low-densi 97.7 7.5E-06 2.6E-10 72.8 1.1 53 761-822 41-100 (107)
66 2y38_A Laminin subunit alpha-5 97.6 2.7E-05 9.1E-10 84.9 3.6 81 175-258 266-384 (403)
67 3h5c_B Vitamin K-dependent pro 97.6 7.7E-05 2.6E-09 80.0 7.2 66 490-567 5-77 (317)
68 2y38_A Laminin subunit alpha-5 97.5 4.4E-05 1.5E-09 83.2 3.6 69 145-216 286-385 (403)
69 1edm_B Factor IX; epidermal gr 97.5 7.2E-05 2.5E-09 53.2 3.4 34 535-569 3-38 (39)
70 4aqt_A Laminin subunit gamma-1 97.5 2.9E-05 9.9E-10 84.3 1.9 102 73-217 255-363 (375)
71 4aqt_A Laminin subunit gamma-1 97.5 3.7E-05 1.2E-09 83.5 2.4 84 175-260 255-363 (375)
72 3ca7_A Protein spitz; argos, E 97.2 3.8E-05 1.3E-09 58.5 -0.7 40 725-783 3-48 (52)
73 1edm_B Factor IX; epidermal gr 97.2 0.00021 7.3E-09 50.7 3.2 33 690-739 6-38 (39)
74 1egf_A Epidermal growth factor 97.0 0.00067 2.3E-08 51.7 4.4 37 624-660 3-45 (53)
75 1hae_A Heregulin-alpha; growth 96.9 0.00028 9.6E-09 56.0 2.0 39 536-575 7-52 (63)
76 3p5b_L Low density lipoprotein 96.8 0.00098 3.3E-08 73.8 5.7 71 536-618 1-78 (400)
77 1k36_A Epiregulin; EGF-like fo 96.7 0.00042 1.4E-08 51.1 1.4 35 624-660 3-44 (46)
78 2k2s_B Micronemal protein 6; m 96.5 0.00045 1.5E-08 54.1 0.4 35 535-570 11-50 (61)
79 3p5b_L Low density lipoprotein 96.5 0.0027 9.2E-08 70.3 6.8 55 710-780 13-72 (400)
80 2k2s_B Micronemal protein 6; m 96.5 0.0014 4.9E-08 51.3 2.9 36 688-740 12-50 (61)
81 1a3p_A Epidermal growth factor 96.5 0.0017 5.9E-08 47.5 3.2 29 543-571 10-42 (45)
82 1egf_A Epidermal growth factor 96.3 0.002 7E-08 49.0 3.0 31 694-741 13-45 (53)
83 1a3p_A Epidermal growth factor 96.3 0.0022 7.5E-08 47.0 3.0 31 694-741 10-42 (45)
84 1k36_A Epiregulin; EGF-like fo 96.0 0.0036 1.2E-07 46.0 2.9 30 693-740 12-43 (46)
85 3v65_B Low-density lipoprotein 96.0 0.0013 4.5E-08 72.4 0.5 51 466-527 23-83 (386)
86 1nql_B Epidermal growth factor 95.9 0.0063 2.2E-07 46.2 3.8 33 692-741 11-45 (53)
87 1hae_A Heregulin-alpha; growth 95.8 0.0045 1.5E-07 48.9 2.8 36 690-742 9-49 (63)
88 1nql_B Epidermal growth factor 95.8 0.0021 7.2E-08 48.9 0.8 29 756-784 13-45 (53)
89 2fd6_A Urokinase-type plasmino 95.8 0.0078 2.7E-07 54.5 4.6 58 542-615 1-63 (122)
90 3ltf_D Protein spitz; receptor 95.5 0.0041 1.4E-07 48.2 1.3 33 756-788 15-53 (58)
91 3v65_B Low-density lipoprotein 95.4 0.003 1E-07 69.5 0.6 57 710-782 16-82 (386)
92 3ca7_A Protein spitz; argos, E 94.8 0.014 4.8E-07 44.1 2.6 31 694-741 15-49 (52)
93 3ltf_D Protein spitz; receptor 94.7 0.024 8.1E-07 43.9 3.6 35 694-745 15-53 (58)
94 2fd6_A Urokinase-type plasmino 94.7 0.022 7.6E-07 51.5 4.0 59 694-783 2-63 (122)
95 2ygo_A WIF-1, WNT inhibitory f 94.1 0.024 8.1E-07 54.4 2.9 31 130-160 149-180 (188)
96 3e50_C Protransforming growth 92.8 0.056 1.9E-06 40.2 2.4 27 9-35 14-45 (50)
97 2rnl_A Amphiregulin; AR, color 92.2 0.086 2.9E-06 39.3 2.8 37 124-160 8-49 (50)
98 1g1s_A P-selectin; selectin, l 91.8 0.048 1.6E-06 51.7 1.4 35 536-571 120-156 (162)
99 2ygo_A WIF-1, WNT inhibitory f 91.5 0.14 4.7E-06 49.2 4.1 32 626-660 150-181 (188)
100 1xdt_R Hbegf, heparin-binding 91.0 0.12 4E-06 42.3 2.6 28 8-35 45-77 (79)
101 2i9a_A Urokinase-type plasmino 90.9 0.17 5.8E-06 47.0 4.0 30 542-571 13-47 (145)
102 2rnl_A Amphiregulin; AR, color 90.9 0.077 2.6E-06 39.5 1.3 28 8-35 17-49 (50)
103 1iox_A Betacellulin; EGF-like 90.8 0.077 2.6E-06 39.6 1.3 27 9-35 14-45 (50)
104 3e50_C Protransforming growth 90.6 0.13 4.3E-06 38.3 2.3 28 133-160 13-45 (50)
105 1g1s_A P-selectin; selectin, l 90.4 0.14 4.7E-06 48.4 3.1 33 692-741 124-156 (162)
106 2jkh_L Factor X light chain; p 89.6 0.23 7.7E-06 37.8 3.1 20 710-736 14-33 (55)
107 2i9a_A Urokinase-type plasmino 89.1 0.17 5.7E-06 47.1 2.4 31 753-783 11-46 (145)
108 3nt1_A Prostaglandin-endoperox 89.0 0.15 5E-06 58.5 2.3 35 624-659 1-39 (587)
109 1q4g_A Prostaglandin G/H synth 88.4 0.17 5.9E-06 57.8 2.4 36 535-571 2-41 (553)
110 1xdt_R Hbegf, heparin-binding 88.0 0.2 6.8E-06 40.9 1.8 35 126-160 38-77 (79)
111 3nt1_A Prostaglandin-endoperox 88.0 0.23 7.8E-06 56.9 3.1 34 536-570 2-39 (587)
112 1kig_L Factor XA; glycoprotein 87.7 0.21 7.2E-06 37.3 1.7 21 709-736 10-30 (51)
113 2bz6_L Blood coagulation facto 87.3 0.37 1.3E-05 36.3 2.9 21 709-736 11-32 (53)
114 2p26_A Integrin beta-2; hybrid 85.9 0.2 6.9E-06 51.8 1.0 60 219-284 197-264 (280)
115 2p26_A Integrin beta-2; hybrid 85.8 0.18 6.2E-06 52.2 0.6 60 176-241 197-264 (280)
116 1ob1_C Major merozoite surface 85.7 0.66 2.3E-05 39.5 3.8 28 627-655 7-37 (99)
117 1apq_A Complement protease C1R 85.3 0.56 1.9E-05 35.0 3.0 20 710-736 25-44 (53)
118 1ob1_C Major merozoite surface 85.3 0.85 2.9E-05 38.8 4.3 56 710-777 17-83 (99)
119 1n1i_A Merozoite surface prote 84.8 1 3.4E-05 38.6 4.6 30 625-655 11-43 (105)
120 2e26_A Reelin, reeler protein; 84.4 0.16 5.3E-06 58.9 -0.8 44 59-105 521-568 (725)
121 1n1i_A Merozoite surface prote 83.9 1.7 5.7E-05 37.3 5.6 55 710-777 23-84 (105)
122 1apq_A Complement protease C1R 83.4 0.43 1.5E-05 35.6 1.6 13 466-478 32-44 (53)
123 1iox_A Betacellulin; EGF-like 82.5 0.8 2.7E-05 34.0 2.7 17 725-741 30-46 (50)
124 2e26_A Reelin, reeler protein; 81.6 0.24 8.3E-06 57.3 -0.6 45 603-659 521-565 (725)
125 2kl7_A Fibulin-4; secreted, ca 81.2 0.8 2.7E-05 36.7 2.5 26 693-735 11-37 (71)
126 1gl4_A Nidogen-1, entactin; im 80.8 0.68 2.3E-05 47.6 2.4 28 692-736 12-39 (285)
127 3cfw_A L-selectin; EGF, cell a 80.0 1 3.6E-05 42.3 3.4 32 693-741 125-156 (164)
128 1q4g_A Prostaglandin G/H synth 79.2 0.99 3.4E-05 51.5 3.4 35 689-740 4-40 (553)
129 1g1t_A E-selectin; EGF, adhesi 78.0 0.48 1.6E-05 44.3 0.3 35 536-571 120-156 (157)
130 1g1t_A E-selectin; EGF, adhesi 77.4 1.4 4.6E-05 41.1 3.2 33 692-741 124-156 (157)
131 3cfw_A L-selectin; EGF, cell a 77.3 0.95 3.2E-05 42.6 2.1 33 538-571 122-156 (164)
132 2kl7_A Fibulin-4; secreted, ca 76.0 0.75 2.6E-05 36.9 0.8 34 430-478 3-38 (71)
133 2jkh_L Factor X light chain; p 71.5 0.96 3.3E-05 34.2 0.4 18 465-482 20-41 (55)
134 1kli_L Factor VIIA; extrinsic 71.3 2.5 8.6E-05 33.6 2.8 22 708-736 16-38 (69)
135 1gl4_A Nidogen-1, entactin; im 71.2 0.95 3.3E-05 46.6 0.4 35 535-570 5-45 (285)
136 3asi_A Neurexin-1-alpha; beta- 65.2 3.4 0.00012 45.2 3.4 35 536-571 186-223 (410)
137 2wph_E Coagulation factor IXA 49.2 9.1 0.00031 29.2 2.3 22 708-736 10-32 (59)
138 3fl7_A Ephrin receptor; ATP-bi 46.3 7.3 0.00025 44.2 2.0 65 177-242 252-321 (536)
139 1szb_A Mannose binding lectin- 43.5 4.1 0.00014 38.4 -0.5 39 606-653 113-157 (170)
140 3qcw_A Neurexin-1-alpha; synap 41.7 12 0.0004 47.3 3.0 35 536-571 1018-1055(1245)
141 3fl7_A Ephrin receptor; ATP-bi 40.1 8.6 0.00029 43.6 1.3 37 632-669 251-289 (536)
142 3asi_A Neurexin-1-alpha; beta- 39.6 15 0.0005 40.0 3.1 33 692-741 190-223 (410)
143 2ddu_A Reelin; beta-jelly-roll 38.8 6.8 0.00023 42.0 0.1 30 5-35 192-224 (387)
144 2bz6_L Blood coagulation facto 35.5 7.8 0.00027 28.8 -0.0 30 594-627 12-44 (53)
145 1szb_A Mannose binding lectin- 32.0 19 0.00066 33.7 2.1 20 710-736 140-159 (170)
146 1cmr_A Charybdotoxin, alpha ch 23.2 54 0.0018 21.5 2.3 23 2-25 6-30 (31)
147 3qcw_A Neurexin-1-alpha; synap 20.2 50 0.0017 41.6 3.3 36 689-741 1019-1055(1245)
148 3tbd_A Netrin-G2, laminet-2; l 20.0 37 0.0013 35.7 1.7 39 73-113 270-310 (338)
No 1
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.78 E-value=7e-23 Score=209.93 Aligned_cols=235 Identities=11% Similarity=-0.047 Sum_probs=166.0
Q ss_pred ccccceeeccCCCC---ccCCCCCCCCCCCCCCCCCCCCcCCCCCCCCcccC--CCceeeCCCCCCCCCCCCCCCCCccC
Q psy6207 461 SLTLFTFLSLTHSG---FSGRHCEKPCPQGSYGQDCSQTCLCSKEGSASCSP--GSGQCVCRPGGAGQLCDRPCSEGRYG 535 (823)
Q Consensus 461 ~~~~~s~~C~C~~G---y~G~~C~~~C~~g~~g~~C~~~c~C~~~g~g~C~~--~~~~C~C~~G~~G~~C~~~c~~g~~~ 535 (823)
.+..++|++.+.+| |+|.+++.. ++++.. +|.+ +|+|++ .+|+|.|++||+|.+|+.. +
T Consensus 7 ~n~~Gg~s~~~~pgg~~~~g~~~~~n------~~~~~~--~c~n--gG~C~~g~~~y~C~Cp~Gf~G~~Ce~n------i 70 (267)
T 4fbr_A 7 QNQWGGSQATWNPGGLWLIGARDKQN------VVALDI--KSDD--GGKTLKGTMTYNGEGPIGFRGTLSSAN------N 70 (267)
T ss_dssp EEECSSTTSCCEEEEEEECCCCSSCC------EEEEEE--ECSS--TTSEEEEEEEETTSCCEEEEEEECSTT------E
T ss_pred eecCCcccCCcCCCCceeeccccccc------cccCCC--CcCC--CCeecCCCCCeEEeCCCCccccccccc------c
Confidence 44566888899988 678877764 222222 5888 999987 4899999999999999986 5
Q ss_pred CC------CCCCCCCCCCCeeeCCCcEEeCCCCCcCCCccccCcCCcCCCCCCCCCCCCCCCCCeeec--CCCeEecCCC
Q psy6207 536 QN------CTQECRCMNGAACNPQDGTCLCPAGYYGPLCQKRCEFMTYGRNCAQACTCFTENSQGCDI--VTGKCICRPG 607 (823)
Q Consensus 536 ~~------C~~~c~C~~~g~C~~~~~~C~C~~G~~G~~C~~~c~~~~~g~~C~~~~~C~~~~~~~C~~--~~~~C~C~~G 607 (823)
++ |.+. ||+++++| |+|..|++. ++|+.. +| .++++|++ .+|+|+|++|
T Consensus 71 ~ec~~~~~c~s~-pC~nggtc------------~~G~~c~~~-------~eC~s~-pC--~ngG~C~~~~~sy~C~C~~G 127 (267)
T 4fbr_A 71 YTVENQWGGTSA-PWQPGGVW------------VLGARDKQN-------IVAVSI-KS--NDGGKTLTGTTTYNGEGPIG 127 (267)
T ss_dssp EEEEEESSSTTS-CEEEEEEE------------ECCCCSSCC-------EEEEEE-EC--SSTTSEEEEEEEETTSCCEE
T ss_pred cccccccCcCCC-cccCCCee------------eccCccccc-------cccCCC-CC--CCCCEEecCCccEEeeCCCC
Confidence 66 5555 77777665 467888764 346654 78 89999975 5899999999
Q ss_pred CCCCCccccCCCCCccCCCCCCC-----CCCCCCCeecCCCCeeecCCCCCCCCCCCCCCCCCcCCcccccccccCCCCC
Q psy6207 608 FKGHRCETQCSNPNTYGEDCSLD-----CGCNNGGTCNQLDGGCNCGRGYQGKLCTAPCPEGQYGYNCKEECLTKGQDVP 682 (823)
Q Consensus 608 ~~G~~C~~~c~~~~~~~~~C~~~-----~~C~~~g~C~~~~~~C~C~~Gy~G~~C~~~c~~g~~g~~C~~~c~c~~~~~~ 682 (823)
|+|..|+.. +++|+.. .+|.++++| |.|.+|++.. +
T Consensus 128 f~G~~Ce~~-------~d~C~n~~~c~s~pC~ngg~c------------~~G~~c~~~i-------~------------- 168 (267)
T 4fbr_A 128 FKSEVTDGD-------TYSVENQWGGSAAPWHSGGVW------------VLGTRGKQNV-------I------------- 168 (267)
T ss_dssp EEEEECCCC-------EEEEEEECSSTTSCCEEEEEE------------ECCSSTTSCE-------E-------------
T ss_pred ccccCCCCC-------cccccccCCcCCccccCCcce------------eccccccccc-------c-------------
Confidence 999999876 4564433 145544444 4566666531 1
Q ss_pred cccccccccccccccCceeeeeeeeceeeecccceeEeecccceeeecCCeeecccCccCCCCCCCCCCCCCC---CCCC
Q psy6207 683 VRTAVSHALKVHMGINARRYVNVRMVATFNTTLYLYLFVNLTYGILYKTLVRLRECEERCPPGTHGPSCINRC---RCQN 759 (823)
Q Consensus 683 ~~~~~~~~~~~~c~~~g~~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~G~~g~~C~~~C~~g~~G~~C~~~C---~C~~ 759 (823)
+...+|.++| +|++...+|+ |+|++||+|.+|+.. ++++ ..-.
T Consensus 169 -------c~~~~c~ngg----------~C~dg~~~y~-------C~Cp~Gf~G~~c~~~----------i~ec~~~~~c~ 214 (267)
T 4fbr_A 169 -------NVDAKSNDGG----------KTLSGTMTYN-------GEGPIGFRGTLTSPD----------TYTVENQWGGS 214 (267)
T ss_dssp -------EEEEECSSTT----------SEEEEEEEET-------TSCCEEEEEEEEETT----------EEEEEEECSCT
T ss_pred -------cCCCCCCCCC----------EeeCCCCCeE-------EeCCCCccccccccc----------cceeccCCCcc
Confidence 2245678999 9999888888 999999999999875 2222 1122
Q ss_pred CCeecCC-CCeeeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCeeecc--CceeecCCCCccC
Q psy6207 760 GAICNPA-NGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHV--TGECQCEPGFKGQ 822 (823)
Q Consensus 760 ~g~C~~~-~~~C~C~~G~~G~~C~~~C~~~~~g~~C~~~c~C~~~~~C~~~--~g~C~C~~G~~G~ 822 (823)
.+.|.+. .+.+.|+.++.+..|+. +|.|+|+|++. .++|.||+||+|.
T Consensus 215 ~~~c~~gG~~~~~C~~g~n~~~c~~---------------~c~ngGtC~dg~~sy~CeCp~GF~G~ 265 (267)
T 4fbr_A 215 TAPWNPGGFWMIGARNGQNVVALNV---------------ASSDGGKTLAGTMIYNGEGPIGFRAR 265 (267)
T ss_dssp TSCCEEEEEEECCCCTTCCEEEEEE---------------ECSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred CCcccCCCeEEEecCCCCccccCCc---------------CCCCCCEeeCCCcceeecCCCCcccc
Confidence 2233332 23455777777655433 67899999975 3599999999985
No 2
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.77 E-value=2.9e-19 Score=192.74 Aligned_cols=161 Identities=35% Similarity=0.943 Sum_probs=75.8
Q ss_pred cCCCCCCCC-ceeCCCCeeecCCCCcCCCCCCCCCCCCCCCCCcccccCCCcccCCCCCCCCCCCCCCCCCCCCCCCccc
Q psy6207 5 PVCTDECIR-GTCIAPNTCKCEVGFGGPTCNIAKDAKTKPTDTYTFRLMFPQCMDPCPEGTWGKQCVHYCSCPVESMECS 83 (823)
Q Consensus 5 p~C~~~C~~-G~C~~~~~C~C~~G~~G~~C~~~~~~~~C~~~~~~~~~~~~~C~~~C~~g~~G~~C~~~C~C~~~~~~C~ 83 (823)
+.|+++|.+ |+|++.++|+|++||+|+.|+..+ |.+ +|.++| +|+
T Consensus 149 ~~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~----C~~-----------------------------~C~~~G-~C~ 194 (324)
T 2ygq_A 149 AECPGGCRNGGFCNERRICECPDGFHGPHCEKAL----CTP-----------------------------RCMNGG-LCV 194 (324)
T ss_dssp CCCSSCCCSSCEECTTSCEECCTTEESSSSCEES----SSS-----------------------------CCCTTC-EEC
T ss_pred CCCCCCCCCCCEECCCCeEECCCCCcCCCCCCCC----CCC-----------------------------CCCCCC-EEc
Confidence 578899976 899999999999999999998641 211 467777 997
Q ss_pred CCCCcccCCCCccCCCCCccCCCCCCcCCCCCccccccCCCCCcccccCCCCCC-CccccCCceeeccCCCCCCccccCC
Q psy6207 84 RIDGNCSCPPGFRGAKCKERTCPDGLYGEGCDRTCECNVENTKLCVPVCTDECI-RGTCIAPNTCKCEVGFGGPTCNIEC 162 (823)
Q Consensus 84 ~~~~~C~C~~G~~G~~C~~~~C~~~~~g~~C~~~C~C~~~~~~~C~~~c~~~C~-~G~C~~~~~C~C~~Gy~G~~C~~~c 162 (823)
. .++|+|++||+|..|+.+.| +.+|. +|+|+..++|.|++||+|..|++
T Consensus 195 ~-~~~C~C~~G~~G~~C~~~~C---------------------------~~~C~~~G~C~~~~~C~C~~G~~G~~C~~-- 244 (324)
T 2ygq_A 195 T-PGFCICPPGFYGVNCDKANC---------------------------STTCFNGGTCFYPGKCICPPGLEGEQCEI-- 244 (324)
T ss_dssp S-SCCEECCTTCBTTTTCBCCC---------------------------SSCCCSSCCBSCSSCBCCCTTCCTTTTC---
T ss_pred C-CCEEeCCCCccCCCcccCcC---------------------------CCCCCCCCeeCCCCeeeCCCCccCCCCCc--
Confidence 4 68999999999999984333 23454 58999899999999999999985
Q ss_pred CCCCCCCCCCCCCCCCCCCeecCCCCcccCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCCeecCCCCccccCCCCCCC
Q psy6207 163 PEGHYGPDCKLACQCENGAGCDPNTGACDCLDGYMGTHCEEVCGPGRFGQNCSQECQCRNGAECHPATGECSCQPGFTGS 242 (823)
Q Consensus 163 ~~g~~g~~C~~~c~C~~~g~C~~~~g~C~C~~Gy~G~~C~~~C~~g~~g~~C~~~~~C~~~g~C~~~~~~C~C~~G~~G~ 242 (823)
+.|.. +|.++|+|+. .++|.|++||+|..|+. +.|.. +|.++|+|++ +++|+|++||+|.
T Consensus 245 ------~~C~~--~C~~~g~C~~-~~~C~C~~G~~G~~C~~--------~~C~~--~C~~~g~C~~-~~~C~C~~G~~G~ 304 (324)
T 2ygq_A 245 ------SKCPQ--PCRNGGKCIG-KSKCKCSKGYQGDLCSK--------PVCEP--GCGAHGTCHE-PNKCQCQEGWHGR 304 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ------CcCCC--cCCCCCEECC-CCEEECCCCCcCCCCcC--------CCCCC--CCCCCCEECC-CCEeECCCCCcCC
Confidence 23432 7899999984 67999999999999985 34542 6889999986 7899999999999
Q ss_pred CCCcCCC
Q psy6207 243 LCEERCP 249 (823)
Q Consensus 243 ~C~~~C~ 249 (823)
.|+...+
T Consensus 305 ~C~~~~~ 311 (324)
T 2ygq_A 305 HCNKRYE 311 (324)
T ss_dssp -------
T ss_pred CCCCCCc
Confidence 9997543
No 3
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=99.76 E-value=1.2e-22 Score=208.31 Aligned_cols=240 Identities=11% Similarity=0.055 Sum_probs=163.0
Q ss_pred CcceEcCCC---cccCCCCCCCCCCccCCCCCCCCCCCCCCcccCCCCccccccccccccccceeeccCCCCccCCCCCC
Q psy6207 406 TGKCECGPG---WDGLTCDRPCPITRWGDNCSQHCNCKNDALCFPRNGTNTYQYFFLQSLTLFTFLSLTHSGFSGRHCEK 482 (823)
Q Consensus 406 ~~~C~C~~G---~~G~~C~~~C~~~~~~~~C~~~~~C~~~g~C~~~~g~C~~~~~~~~~~~~~s~~C~C~~Gy~G~~C~~ 482 (823)
.+++.+.+| |+|.++++. +.++.. +|.++|+|++..+ +|+|.|++||+|.+||.
T Consensus 12 g~s~~~~pgg~~~~g~~~~~n------~~~~~~--~c~ngG~C~~g~~---------------~y~C~Cp~Gf~G~~Ce~ 68 (267)
T 4fbr_A 12 GSQATWNPGGLWLIGARDKQN------VVALDI--KSDDGGKTLKGTM---------------TYNGEGPIGFRGTLSSA 68 (267)
T ss_dssp STTSCCEEEEEEECCCCSSCC------EEEEEE--ECSSTTSEEEEEE---------------EETTSCCEEEEEEECST
T ss_pred cccCCcCCCCceeeccccccc------cccCCC--CcCCCCeecCCCC---------------CeEEeCCCCcccccccc
Confidence 346666677 677777764 233322 7889999987554 99999999999999998
Q ss_pred CCCCCCCCCCCCCC-----cCCCCCCCCcccCCCceeeCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCeeeCC--Cc
Q psy6207 483 PCPQGSYGQDCSQT-----CLCSKEGSASCSPGSGQCVCRPGGAGQLCDRPCSEGRYGQNCTQECRCMNGAACNPQ--DG 555 (823)
Q Consensus 483 ~C~~g~~g~~C~~~-----c~C~~~g~g~C~~~~~~C~C~~G~~G~~C~~~c~~g~~~~~C~~~c~C~~~g~C~~~--~~ 555 (823)
. +++|+.. .||++ +++| |.|.+|+. .++|++. ||+++|+|++. +|
T Consensus 69 n------i~ec~~~~~c~s~pC~n--ggtc------------~~G~~c~~-------~~eC~s~-pC~ngG~C~~~~~sy 120 (267)
T 4fbr_A 69 N------NYTVENQWGGTSAPWQP--GGVW------------VLGARDKQ-------NIVAVSI-KSNDGGKTLTGTTTY 120 (267)
T ss_dssp T------EEEEEEESSSTTSCEEE--EEEE------------ECCCCSSC-------CEEEEEE-ECSSTTSEEEEEEEE
T ss_pred c------ccccccccCcCCCcccC--CCee------------eccCcccc-------ccccCCC-CCCCCCEEecCCccE
Confidence 5 5553322 14555 4433 56888987 3689888 99999999986 68
Q ss_pred EEeCCCCCcCCCccccCcCCcCCCCCCCCCCCCCCCCCeeecCCCeEecCCCCCCCCccccCCCCCccCCCCCCCCCCCC
Q psy6207 556 TCLCPAGYYGPLCQKRCEFMTYGRNCAQACTCFTENSQGCDIVTGKCICRPGFKGHRCETQCSNPNTYGEDCSLDCGCNN 635 (823)
Q Consensus 556 ~C~C~~G~~G~~C~~~c~~~~~g~~C~~~~~C~~~~~~~C~~~~~~C~C~~G~~G~~C~~~c~~~~~~~~~C~~~~~C~~ 635 (823)
+|+|++||+|.+|+...++... ..+-...+| ++.++| |.|.+|++. ++|... +|.+
T Consensus 121 ~C~C~~Gf~G~~Ce~~~d~C~n-~~~c~s~pC--~ngg~c------------~~G~~c~~~--------i~c~~~-~c~n 176 (267)
T 4fbr_A 121 NGEGPIGFKSEVTDGDTYSVEN-QWGGSAAPW--HSGGVW------------VLGTRGKQN--------VINVDA-KSND 176 (267)
T ss_dssp TTSCCEEEEEEECCCCEEEEEE-ECSSTTSCC--EEEEEE------------ECCSSTTSC--------EEEEEE-ECSS
T ss_pred EeeCCCCccccCCCCCcccccc-cCCcCCccc--cCCcce------------ecccccccc--------cccCCC-CCCC
Confidence 9999999999999865432100 011112244 333332 457777764 234444 8999
Q ss_pred CCeecCC--CCeeecCCCCCCCCCCCCCCCCCcCCcccccccccCCCCCcccccccccccccccCceeeeeeeeceeeec
Q psy6207 636 GGTCNQL--DGGCNCGRGYQGKLCTAPCPEGQYGYNCKEECLTKGQDVPVRTAVSHALKVHMGINARRYVNVRMVATFNT 713 (823)
Q Consensus 636 ~g~C~~~--~~~C~C~~Gy~G~~C~~~c~~g~~g~~C~~~c~c~~~~~~~~~~~~~~~~~~c~~~g~~~~~~~~~~~C~~ 713 (823)
+|+|++. +|+|+|++||+|..|+... ++|.. ......+ .|.+
T Consensus 177 gg~C~dg~~~y~C~Cp~Gf~G~~c~~~i------~ec~~--------------------~~~c~~~----------~c~~ 220 (267)
T 4fbr_A 177 GGKTLSGTMTYNGEGPIGFRGTLTSPDT------YTVEN--------------------QWGGSTA----------PWNP 220 (267)
T ss_dssp TTSEEEEEEEETTSCCEEEEEEEEETTE------EEEEE--------------------ECSCTTS----------CCEE
T ss_pred CCEeeCCCCCeEEeCCCCcccccccccc------ceecc--------------------CCCccCC----------cccC
Confidence 9999975 6799999999999887641 11111 1111222 3433
Q ss_pred ccceeEeecccceeeecCCeeecccCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeeeCCCCCCCC
Q psy6207 714 TLYLYLFVNLTYGILYKTLVRLRECEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCLCAPGWMGS 779 (823)
Q Consensus 714 ~~g~~~~~~~~~~C~C~~G~~g~~C~~~C~~g~~G~~C~~~C~C~~~g~C~~~--~~~C~C~~G~~G~ 779 (823)
.+++. +.|+.++.+..++. +|.++|+|++. +|+|+||+||+|+
T Consensus 221 -gG~~~-------~~C~~g~n~~~c~~---------------~c~ngGtC~dg~~sy~CeCp~GF~G~ 265 (267)
T 4fbr_A 221 -GGFWM-------IGARNGQNVVALNV---------------ASSDGGKTLAGTMIYNGEGPIGFRAR 265 (267)
T ss_dssp -EEEEE-------CCCCTTCCEEEEEE---------------ECSSTTSEEEEEEEETTSCCEEEEEE
T ss_pred -CCeEE-------EecCCCCccccCCc---------------CCCCCCEeeCCCcceeecCCCCcccc
Confidence 23555 67888888776643 68899999986 7899999999985
No 4
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.75 E-value=5.9e-19 Score=196.88 Aligned_cols=181 Identities=25% Similarity=0.507 Sum_probs=133.5
Q ss_pred CcEEeCCCCCcCCCccccCcCCcCCCCCCCCCCCCCCCCCeee---cCCCeEecCCCCCCCCccccCCCCCccCCCCCCC
Q psy6207 554 DGTCLCPAGYYGPLCQKRCEFMTYGRNCAQACTCFTENSQGCD---IVTGKCICRPGFKGHRCETQCSNPNTYGEDCSLD 630 (823)
Q Consensus 554 ~~~C~C~~G~~G~~C~~~c~~~~~g~~C~~~~~C~~~~~~~C~---~~~~~C~C~~G~~G~~C~~~c~~~~~~~~~C~~~ 630 (823)
++.+.++.+|.+..++.......-.+.......+ ..+.... ...+.|.|++||.|+.|+..|.
T Consensus 138 s~~~~~p~~~~~~~~~~~~~~~~~~d~g~y~~~~--~~g~~~~~~~~~~~~c~C~~g~~G~~C~~~C~------------ 203 (423)
T 2gy5_A 138 SFIHSVPRHEVPDILEVHLPHAQPQDAGVYSARY--IGGNLFTSAFTRLIVRRCEAQKWGPECNHLCT------------ 203 (423)
T ss_dssp EEEEEECGGGCCSEEEEEETTCCGGGCEEEEEEE--TTCCGGGCEEEEEEECSSCTTEESTTSCEECC------------
T ss_pred eEeeccCccccCCeEEeccCcCCCCCCCeEeeEE--CCCcEeccccccccCCcCCCCCCCCCCCCCCC------------
Confidence 4688999999988776421110000000000011 1111100 0124688899998888876431
Q ss_pred CCCCCCCeecCCCCeeecCCCCCCCCCCCCCCCCCcCCcccccccccCCCCCcccccccccccccccCceeeeeeeecee
Q psy6207 631 CGCNNGGTCNQLDGGCNCGRGYQGKLCTAPCPEGQYGYNCKEECLTKGQDVPVRTAVSHALKVHMGINARRYVNVRMVAT 710 (823)
Q Consensus 631 ~~C~~~g~C~~~~~~C~C~~Gy~G~~C~~~c~~g~~g~~C~~~c~c~~~~~~~~~~~~~~~~~~c~~~g~~~~~~~~~~~ 710 (823)
+|.++|+|++.+|+|+|++||+|.+|++.|.++++|..|.+.|.+. ..|.+++ +
T Consensus 204 -~C~~~G~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~---------------~~C~~~g----------~ 257 (423)
T 2gy5_A 204 -ACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQ---------------EGCKSYV----------F 257 (423)
T ss_dssp -CCCTTCEECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCST---------------TTTTTCC----------E
T ss_pred -CCCCCCEEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCC---------------CCCCCCC----------E
Confidence 7999999998789999999999999999999999999998755433 3466777 8
Q ss_pred eecccceeEeecccceeeecCCeeecccCccCCCCCCCCCCCCCCCCCCCCeecCCCCeeeCCCCCCCCCCCCC
Q psy6207 711 FNTTLYLYLFVNLTYGILYKTLVRLRECEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNVP 784 (823)
Q Consensus 711 C~~~~g~~~~~~~~~~C~C~~G~~g~~C~~~C~~g~~G~~C~~~C~C~~~g~C~~~~~~C~C~~G~~G~~C~~~ 784 (823)
|.. ++|+ |.|++||+|..|++.|++||+|+.|+..|+|.++|+|++.. .|.|++||+|..|++.
T Consensus 258 C~~--~~~~-------C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~-~C~C~~G~~G~~Ce~~ 321 (423)
T 2gy5_A 258 CLP--DPYG-------CSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQ-GCLCSPGWQGLQCERE 321 (423)
T ss_dssp EET--TTTE-------EECCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTT-EEECCTTCBSTTSCBC
T ss_pred ECC--CCCe-------EEeCCCcccccccCccCCCCcCCcccccccCCCCCEecCCC-ceECCCCCcCCCCccC
Confidence 853 3444 88999999999999999999999999999999999999875 4999999999999974
No 5
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.73 E-value=1.9e-18 Score=186.30 Aligned_cols=159 Identities=35% Similarity=0.912 Sum_probs=75.0
Q ss_pred CCCCCCcccCCCCccccccccccccccceeeccCCCCccCCCCCCCCCCCCCCCCCCCCcCCCCCCCCcccCCCceeeCC
Q psy6207 438 NCKNDALCFPRNGTNTYQYFFLQSLTLFTFLSLTHSGFSGRHCEKPCPQGSYGQDCSQTCLCSKEGSASCSPGSGQCVCR 517 (823)
Q Consensus 438 ~C~~~g~C~~~~g~C~~~~~~~~~~~~~s~~C~C~~Gy~G~~C~~~C~~g~~g~~C~~~c~C~~~g~g~C~~~~~~C~C~ 517 (823)
+|.++|+|++ .++|+|++||+|..|+. +.|.. +|.+ +|+|+. +++|+|+
T Consensus 154 ~C~~~G~C~~------------------~~~C~C~~G~~G~~C~~--------~~C~~--~C~~--~G~C~~-~~~C~C~ 202 (324)
T 2ygq_A 154 GCRNGGFCNE------------------RRICECPDGFHGPHCEK--------ALCTP--RCMN--GGLCVT-PGFCICP 202 (324)
T ss_dssp CCCSSCEECT------------------TSCEECCTTEESSSSCE--------ESSSS--CCCT--TCEECS-SCCEECC
T ss_pred CCCCCCEECC------------------CCeEECCCCCcCCCCCC--------CCCCC--CCCC--CCEEcC-CCEEeCC
Confidence 7888888864 35569999999999986 23543 5888 999974 7999999
Q ss_pred CCCCCCCCCCCCCCCccCCCCCCCCCCCCCCeeeCCCcEEeCCCCCcCCCccccCcCCcCCCCCCCCCCCCCCCCCeeec
Q psy6207 518 PGGAGQLCDRPCSEGRYGQNCTQECRCMNGAACNPQDGTCLCPAGYYGPLCQKRCEFMTYGRNCAQACTCFTENSQGCDI 597 (823)
Q Consensus 518 ~G~~G~~C~~~c~~g~~~~~C~~~c~C~~~g~C~~~~~~C~C~~G~~G~~C~~~c~~~~~g~~C~~~~~C~~~~~~~C~~ 597 (823)
+||+|..|+. +.|.. +|.++|+|++ .++|.|++||+|..|+.. +|. .+| .++++|+.
T Consensus 203 ~G~~G~~C~~--------~~C~~--~C~~~G~C~~-~~~C~C~~G~~G~~C~~~--------~C~--~~C--~~~g~C~~ 259 (324)
T 2ygq_A 203 PGFYGVNCDK--------ANCST--TCFNGGTCFY-PGKCICPPGLEGEQCEIS--------KCP--QPC--RNGGKCIG 259 (324)
T ss_dssp TTCBTTTTCB--------CCCSS--CCCSSCCBSC-SSCBCCCTTCCTTTTC----------------------------
T ss_pred CCccCCCccc--------CcCCC--CCCCCCeeCC-CCeeeCCCCccCCCCCcC--------cCC--CcC--CCCCEECC
Confidence 9999999986 35753 8999999986 479999999999999742 454 368 78889975
Q ss_pred CCCeEecCCCCCCCCccccCCCCCccCCCCCCCCCCCCCCeecCCCCeeecCCCCCCCCCCCCCCC
Q psy6207 598 VTGKCICRPGFKGHRCETQCSNPNTYGEDCSLDCGCNNGGTCNQLDGGCNCGRGYQGKLCTAPCPE 663 (823)
Q Consensus 598 ~~~~C~C~~G~~G~~C~~~c~~~~~~~~~C~~~~~C~~~g~C~~~~~~C~C~~Gy~G~~C~~~c~~ 663 (823)
.++|+|++||+|..|+. ++|.. +|.++|+|++ .++|+|++||+|.+|++..+.
T Consensus 260 -~~~C~C~~G~~G~~C~~---------~~C~~--~C~~~g~C~~-~~~C~C~~G~~G~~C~~~~~~ 312 (324)
T 2ygq_A 260 -KSKCKCSKGYQGDLCSK---------PVCEP--GCGAHGTCHE-PNKCQCQEGWHGRHCNKRYEA 312 (324)
T ss_dssp ------------------------------------------------------------------
T ss_pred -CCEEECCCCCcCCCCcC---------CCCCC--CCCCCCEECC-CCEeECCCCCcCCCCCCCCcc
Confidence 58999999999999984 35653 8999999986 689999999999999986543
No 6
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.72 E-value=1.1e-18 Score=170.92 Aligned_cols=152 Identities=28% Similarity=0.630 Sum_probs=114.1
Q ss_pred cceeeccCCCCccCCCCCCCCCCCCCCCCCCCCcCCCCCCCCcccCCCceeeCCCCCCCCCCCCCCCCCccCCCCCCCCC
Q psy6207 464 LFTFLSLTHSGFSGRHCEKPCPQGSYGQDCSQTCLCSKEGSASCSPGSGQCVCRPGGAGQLCDRPCSEGRYGQNCTQECR 543 (823)
Q Consensus 464 ~~s~~C~C~~Gy~G~~C~~~C~~g~~g~~C~~~c~C~~~g~g~C~~~~~~C~C~~G~~G~~C~~~c~~g~~~~~C~~~c~ 543 (823)
...+.|+|++||.|..|+..|.+ ...|.+ +++|+ .+++|+|++||+|..|+. +.|.. .
T Consensus 14 ~~~~~c~C~~g~~G~~C~~~C~~---------~~~c~~--~g~C~-~~g~C~C~~G~~G~~C~~--------~~C~~--~ 71 (169)
T 2vj2_A 14 EGRSAVTCDDYYYGFGCNKFCRP---------RDDFFG--HYACD-QNGNKTCMEGWMGPECNR--------AICRQ--G 71 (169)
T ss_dssp -------CCTTEETTTTCEECCC---------EEETTE--EEEEC-SSCCEEECTTEESTTSCE--------ECCCT--T
T ss_pred ccCeeeeCCCcCcCCCcccccCC---------CCCcCC--CCEeC-CCCeeECCCCCcCCCCCC--------CCCCC--C
Confidence 34788999999999999875432 224666 88997 488999999999999986 35664 5
Q ss_pred CC-CCCeeeCCCcEEeCCCCCcCCCccccCcCCcCCCCCCCCCCCCCCCCCeeecCCCeEecCCCCCCCCccccCCCCCc
Q psy6207 544 CM-NGAACNPQDGTCLCPAGYYGPLCQKRCEFMTYGRNCAQACTCFTENSQGCDIVTGKCICRPGFKGHRCETQCSNPNT 622 (823)
Q Consensus 544 C~-~~g~C~~~~~~C~C~~G~~G~~C~~~c~~~~~g~~C~~~~~C~~~~~~~C~~~~~~C~C~~G~~G~~C~~~c~~~~~ 622 (823)
|. .+|+|++ .++|+|++||+|..|++ + .....| .+ ++|+ .+|+|+|++||+|..|++.
T Consensus 72 C~~~~g~C~~-~~~C~C~~G~~G~~C~~-C---------~~~~~C--~~-g~C~-~~~~C~C~~G~~G~~C~~~------ 130 (169)
T 2vj2_A 72 CSPKHGSCKL-PGDCRCQYGWQGLYCDK-C---------IPHPGC--VH-GICN-EPWQCLCETNWGGQLCDKD------ 130 (169)
T ss_dssp CCTTTEECSS-TTCCEECTTEESSSSCE-E---------CCCTTC--SS-EECS-STTCCEECTTEETTTTCEE------
T ss_pred CCCCCcccCC-CCeeECCCCCCCCCccc-C---------CCCCCC--CC-CCcC-CCCEEeCCCCCCCCcccCC------
Confidence 65 5678976 68999999999999974 2 222236 43 4776 5799999999999999864
Q ss_pred cCCCCCCCCCCCCCCeecCC---CCeeecCCCCCCCCCCC
Q psy6207 623 YGEDCSLDCGCNNGGTCNQL---DGGCNCGRGYQGKLCTA 659 (823)
Q Consensus 623 ~~~~C~~~~~C~~~g~C~~~---~~~C~C~~Gy~G~~C~~ 659 (823)
+++|....+|.++|+|+++ .|+|+|++||+|.+|++
T Consensus 131 -~~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 131 -LNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCEI 169 (169)
T ss_dssp -SCHHHHTCCCCTTCEEEECSTTCEEEECCTTCCSTTSCC
T ss_pred -CCCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCcCcCC
Confidence 5788753399999999974 47999999999999874
No 7
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.71 E-value=6.1e-18 Score=188.70 Aligned_cols=191 Identities=34% Similarity=0.779 Sum_probs=142.7
Q ss_pred ceeeccCCCCCCccccCCCCCCCCCCCCCCCCCCCCCeecCCCCcccCCCCCcCCCCCCCCCCCCCCCCCCCCC----CC
Q psy6207 145 NTCKCEVGFGGPTCNIECPEGHYGPDCKLACQCENGAGCDPNTGACDCLDGYMGTHCEEVCGPGRFGQNCSQEC----QC 220 (823)
Q Consensus 145 ~~C~C~~Gy~G~~C~~~c~~g~~g~~C~~~c~C~~~g~C~~~~g~C~C~~Gy~G~~C~~~C~~g~~g~~C~~~~----~C 220 (823)
..|.|++||.|+.|+..|. +|+++|+|++.+++|+|++||+|.+|++.|.++|+|..|..++ +|
T Consensus 185 ~~c~C~~g~~G~~C~~~C~------------~C~~~G~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C 252 (423)
T 2gy5_A 185 IVRRCEAQKWGPECNHLCT------------ACMNNGVCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGC 252 (423)
T ss_dssp EECSSCTTEESTTSCEECC------------CCCTTCEECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTT
T ss_pred cCCcCCCCCCCCCCCCCCC------------CCCCCCEEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCC
Confidence 3466677776666664321 6999999998889999999999999998899999998887533 58
Q ss_pred CCCCeecCCCCccccCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCeecCCCCeeeCCCCCCCCCCCCCCCCCCCCCCC
Q psy6207 221 RNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGC 300 (823)
Q Consensus 221 ~~~g~C~~~~~~C~C~~G~~G~~C~~~C~~g~~g~~C~~~c~C~~~g~C~~~~g~C~C~~G~~G~~C~~~C~~g~~g~~C 300 (823)
.++++|+..+++|.|++||+|..|++.|.++|+|+.|...|+|.++|+|++.. .|.|++||+|.+|++...+.
T Consensus 253 ~~~g~C~~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~C~~~~-~C~C~~G~~G~~Ce~~~~~~------ 325 (423)
T 2gy5_A 253 KSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDCKLRCSCNNGEMCDRFQ-GCLCSPGWQGLQCEREGIPR------ 325 (423)
T ss_dssp TTCCEEETTTTEEECCBTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCEEETTT-EEECCTTCBSTTSCBCSSCC------
T ss_pred CCCCEECCCCCeEEeCCCcccccccCccCCCCcCCcccccccCCCCCEecCCC-ceECCCCCcCCCCccCccCC------
Confidence 88889987789999999999999998899999999999888999999998665 49999999999999542221
Q ss_pred CCCCCCCCCCeecCCCCcccCCCCccCCCCCC-CCCCCCCCCCCCCCCCCCCCCCeeecCCceEECCCCccCCC
Q psy6207 301 TVPCECFNGASCHHVTGECQCEPGFKGQKCMD-PCPEGTWGKQCVHYCSCPVESMECSRIDGNCSCPPGFRGAK 373 (823)
Q Consensus 301 ~~~~~C~~~g~C~~~~g~C~C~~G~~G~~C~~-~C~~~~~g~~C~~~c~C~~~~g~C~~~~~~C~C~~G~~G~~ 373 (823)
.........+.+.|.+||.|..|+. .+... ..........++.+.++.+|.+..
T Consensus 326 -------~~~~~~~~~~~~~c~~g~~g~~C~~~~~~~~------------~~~~~~~~~~~G~cl~~~~~~~~d 380 (423)
T 2gy5_A 326 -------MTPKIVDLPDHIEVNSGKFNPICKASGWPLP------------TNEEMTLVKPDGTVLHPKDFNHTD 380 (423)
T ss_dssp -------CCCEECSCCSBCCEESEEECCEEEEECTTCC------------CGGGEEEECTTSCEECCSEEEECS
T ss_pred -------cCcceecCCCeEEeCCCccCCcccccCCcCC------------CCceEEEECCCeEEEeCCCcCccc
Confidence 0112222344788999999987751 12111 001012223467888888777654
No 8
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.68 E-value=7e-18 Score=165.06 Aligned_cols=141 Identities=28% Similarity=0.773 Sum_probs=105.1
Q ss_pred CCCCCCCCCCCCCCC----CCCCCCCcccCCCCcccCCCCccCCCCCccCCCCCCcCCCCCccccccCCCCCcccccCCC
Q psy6207 59 PCPEGTWGKQCVHYC----SCPVESMECSRIDGNCSCPPGFRGAKCKERTCPDGLYGEGCDRTCECNVENTKLCVPVCTD 134 (823)
Q Consensus 59 ~C~~g~~G~~C~~~C----~C~~~~~~C~~~~~~C~C~~G~~G~~C~~~~C~~~~~g~~C~~~C~C~~~~~~~C~~~c~~ 134 (823)
.|++||+|+.|+..| .|.+++ +|+ ..++|+|++||+|..|+++.|. +
T Consensus 20 ~C~~g~~G~~C~~~C~~~~~c~~~g-~C~-~~g~C~C~~G~~G~~C~~~~C~---------------------------~ 70 (169)
T 2vj2_A 20 TCDDYYYGFGCNKFCRPRDDFFGHY-ACD-QNGNKTCMEGWMGPECNRAICR---------------------------Q 70 (169)
T ss_dssp -CCTTEETTTTCEECCCEEETTEEE-EEC-SSCCEEECTTEESTTSCEECCC---------------------------T
T ss_pred eCCCcCcCCCcccccCCCCCcCCCC-EeC-CCCeeECCCCCcCCCCCCCCCC---------------------------C
Confidence 455555555554433 366676 897 4789999999999999854442 2
Q ss_pred CC--CCccccCCceeeccCCCCCCccccCCCCCCCCCCCCCCCCCCCCCeecCCCCcccCCCCCcCCCCCCCCCCCCCCC
Q psy6207 135 EC--IRGTCIAPNTCKCEVGFGGPTCNIECPEGHYGPDCKLACQCENGAGCDPNTGACDCLDGYMGTHCEEVCGPGRFGQ 212 (823)
Q Consensus 135 ~C--~~G~C~~~~~C~C~~Gy~G~~C~~~c~~g~~g~~C~~~c~C~~~g~C~~~~g~C~C~~Gy~G~~C~~~C~~g~~g~ 212 (823)
.| .||+|+++++|+|++||+|..|+. |.. .-.|.+ |+|+ .+++|+|++||+|..|+.. .+
T Consensus 71 ~C~~~~g~C~~~~~C~C~~G~~G~~C~~-C~~---------~~~C~~-g~C~-~~~~C~C~~G~~G~~C~~~------~~ 132 (169)
T 2vj2_A 71 GCSPKHGSCKLPGDCRCQYGWQGLYCDK-CIP---------HPGCVH-GICN-EPWQCLCETNWGGQLCDKD------LN 132 (169)
T ss_dssp TCCTTTEECSSTTCCEECTTEESSSSCE-ECC---------CTTCSS-EECS-STTCCEECTTEETTTTCEE------SC
T ss_pred CCCCCCcccCCCCeeECCCCCCCCCccc-CCC---------CCCCCC-CCcC-CCCEEeCCCCCCCCcccCC------CC
Confidence 23 478899899999999999999973 432 113664 4898 5789999999999999842 15
Q ss_pred CCCCCCCCCCCCeecCC---CCccccCCCCCCCCCCc
Q psy6207 213 NCSQECQCRNGAECHPA---TGECSCQPGFTGSLCEE 246 (823)
Q Consensus 213 ~C~~~~~C~~~g~C~~~---~~~C~C~~G~~G~~C~~ 246 (823)
+|....+|+++|+|+++ +++|+|++||+|++|++
T Consensus 133 ~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 133 YCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCEI 169 (169)
T ss_dssp HHHHTCCCCTTCEEEECSTTCEEEECCTTCCSTTSCC
T ss_pred CCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCcCcCC
Confidence 66544489999999863 58999999999999973
No 9
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.58 E-value=4.5e-15 Score=173.63 Aligned_cols=169 Identities=31% Similarity=0.757 Sum_probs=126.4
Q ss_pred CCCCCCcccCCCCccccccccccccccceee---ccCCCCccCCCCCCCCCCCCC----CCCCCCC---cCCCCCCCCcc
Q psy6207 438 NCKNDALCFPRNGTNTYQYFFLQSLTLFTFL---SLTHSGFSGRHCEKPCPQGSY----GQDCSQT---CLCSKEGSASC 507 (823)
Q Consensus 438 ~C~~~g~C~~~~g~C~~~~~~~~~~~~~s~~---C~C~~Gy~G~~C~~~C~~g~~----g~~C~~~---c~C~~~g~g~C 507 (823)
+|.++++|.+..| +|. |.|++||+|..|+.. .+.+ .++|... .+|.+ +|+|
T Consensus 441 pc~n~~~C~~g~G---------------~~~~G~C~C~~Gy~G~~Ce~~--~~~~~~~~~~~C~~~~~~~~Cs~--~G~C 501 (690)
T 3fcs_B 441 AEPNSHRCNNGNG---------------TFECGVCRCGPGWLGSQCECS--EEDYRPSQQDECSPREGQPVCSQ--RGEC 501 (690)
T ss_dssp CCTTCTTTTTTSE---------------EEETTEEEECTTCCSSSSCCS--CC------CCCCSSSSSSCGGGG--SEEE
T ss_pred CCCCCCcccCCCC---------------eEeCCceEeCCCccCCceeec--cCccCCccCCcCCCCCCCCCCCC--CCEE
Confidence 6777888875555 455 899999999999753 2111 2456542 24888 9999
Q ss_pred cCCCceeeCC----CCCCCCCCCCCCCCCccCCCCCCC--CCCCCCCeeeCCCcEEeCCCCCcCCCccccCcCCcCCCCC
Q psy6207 508 SPGSGQCVCR----PGGAGQLCDRPCSEGRYGQNCTQE--CRCMNGAACNPQDGTCLCPAGYYGPLCQKRCEFMTYGRNC 581 (823)
Q Consensus 508 ~~~~~~C~C~----~G~~G~~C~~~c~~g~~~~~C~~~--c~C~~~g~C~~~~~~C~C~~G~~G~~C~~~c~~~~~g~~C 581 (823)
+ .++|.|+ +||+|..|+.. .++|... .+|.++|+|++ ++|.|++||+|..|+ |... .++|
T Consensus 502 ~--~g~C~C~~~~~~Gy~G~~Ce~~------~~~C~~~~~~~C~~~G~C~~--g~C~C~~Gy~G~~Ce--C~~~--~~~C 567 (690)
T 3fcs_B 502 L--CGQCVCHSSDFGKITGKYCECD------DFSCVRYKGEMCSGHGQCSC--GDCLCDSDWTGYYCN--CTTR--TDTC 567 (690)
T ss_dssp C--SSSEEECCCSSCCCBSTTSCBC------SSCCCBSSSSBGGGSEEEET--TEEEECTTEESSSSC--EECC--CTTT
T ss_pred E--CCeeEeecCCCCCeeCCCcCcc------cCcCcCCCCCCCCCCCEecC--CeeECcCCCcCCCCc--cCCC--CCcc
Confidence 7 5899999 99999999843 3567641 27999999976 899999999999998 1110 1345
Q ss_pred CC--CCCCCCCCCCeeecCCCeEec-CCCCCCCCccccCCCCCccCCCCCCCCCCCCCCeecCCCCeeecCCCCCCCCCC
Q psy6207 582 AQ--ACTCFTENSQGCDIVTGKCIC-RPGFKGHRCETQCSNPNTYGEDCSLDCGCNNGGTCNQLDGGCNCGRGYQGKLCT 658 (823)
Q Consensus 582 ~~--~~~C~~~~~~~C~~~~~~C~C-~~G~~G~~C~~~c~~~~~~~~~C~~~~~C~~~g~C~~~~~~C~C~~Gy~G~~C~ 658 (823)
.. ..+| .++|+|.. ++|+| ++||+|..|+. | ..|. . +|.++++|++ |.++|+|..|+
T Consensus 568 ~~~~g~~C--~~~G~C~~--g~C~C~~~Gy~G~~Ce~-C-------~~C~-~-~C~~~g~Cv~------C~~g~tG~~C~ 627 (690)
T 3fcs_B 568 MSSNGLLC--SGRGKCEC--GSCVCIQPGSYGDTCEK-C-------PTCP-D-ACTFKKECVE------CKKFDRGALHD 627 (690)
T ss_dssp BCTTSSBT--SSSCEEET--TEEECCSTTCBSTTSCB-C-------TTSC-C-TTTSCCGGGT------TTTTCCSSSSS
T ss_pred cCCCCCCC--CCCCEEeC--CEEECCCCCccCCCcCc-C-------CCCC-C-CCCCCCCccc------CCCCCccCCCC
Confidence 43 2468 88999976 59999 99999999986 3 1352 2 8999999985 99999999775
Q ss_pred C
Q psy6207 659 A 659 (823)
Q Consensus 659 ~ 659 (823)
.
T Consensus 628 ~ 628 (690)
T 3fcs_B 628 E 628 (690)
T ss_dssp S
T ss_pred c
Confidence 4
No 10
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.54 E-value=1.3e-15 Score=147.42 Aligned_cols=123 Identities=35% Similarity=0.889 Sum_probs=104.9
Q ss_pred CCCCCCCeecCCC----Ccc-cCCCCCcCCCCCCCCCCCCCCCCCC--------CCCCCCCC------CeecCCCCccc-
Q psy6207 175 CQCENGAGCDPNT----GAC-DCLDGYMGTHCEEVCGPGRFGQNCS--------QECQCRNG------AECHPATGECS- 234 (823)
Q Consensus 175 c~C~~~g~C~~~~----g~C-~C~~Gy~G~~C~~~C~~g~~g~~C~--------~~~~C~~~------g~C~~~~~~C~- 234 (823)
|+|.++++|+..+ ++| .|++||+|.+||+ |+++|||+++. +++.|.++ ++|+..+++|+
T Consensus 1 C~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~-C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~ 79 (162)
T 1klo_A 1 CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCEL-CDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLK 79 (162)
T ss_dssp CCSCTTCCEEECSSSCCEEECSCCTTEESTTSCE-ECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCC
T ss_pred CcCcCcCcccccCCCCCEEeCCCCCCCcCCCCcC-CCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccC
Confidence 4789999998654 589 7999999999997 99999998775 34678876 57987899995
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCCC-------CCCCCCCCC------eecCCCCeeeCCCCCCCCCCCCCCCCCCCCCCC
Q psy6207 235 CQPGFTGSLCEERCPPGTHGPSCI-------NRCRCQNGA------ICNPANGQCLCAPGWMGSVCNVPCTPGMWGQGC 300 (823)
Q Consensus 235 C~~G~~G~~C~~~C~~g~~g~~C~-------~~c~C~~~g------~C~~~~g~C~C~~G~~G~~C~~~C~~g~~g~~C 300 (823)
|+++|+|.+|+. |+++||++.+. ..+.|.+.| +|+..+++|+|++||+|++|+ .|.++|||...
T Consensus 80 C~~g~~G~~Ce~-C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd-~C~~g~~g~~~ 156 (162)
T 1klo_A 80 CIYNTAGFYCDR-CKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCG-TCDPGYYNLQS 156 (162)
T ss_dssp BCTTEETTTTCE-ECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCC-EECTTCBCGGG
T ss_pred CCCCCcCCCcCc-CchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCC-CCCCCcccCCC
Confidence 999999999995 99999998887 345787765 898888999999999999999 69999998654
No 11
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.54 E-value=6.4e-15 Score=138.49 Aligned_cols=112 Identities=30% Similarity=0.753 Sum_probs=95.4
Q ss_pred CCCCCC-CCCCCCCCcccCCCCccccccccccccccceeeccCCCCccCCCCCCCCCCCCCCCCCCCCcCCCCCCCCccc
Q psy6207 430 GDNCSQ-HCNCKNDALCFPRNGTNTYQYFFLQSLTLFTFLSLTHSGFSGRHCEKPCPQGSYGQDCSQTCLCSKEGSASCS 508 (823)
Q Consensus 430 ~~~C~~-~~~C~~~g~C~~~~g~C~~~~~~~~~~~~~s~~C~C~~Gy~G~~C~~~C~~g~~g~~C~~~c~C~~~g~g~C~ 508 (823)
+++|+. ..+|.++|+|++..+ +|+|+|++||+|..|+.. +++|... +|.+ +++|+
T Consensus 5 ideC~~~~~~C~~~g~C~~~~g---------------~~~C~C~~Gy~G~~C~~~------~~~C~~~-~C~~--~~~C~ 60 (135)
T 2vj3_A 5 VDECSLGANPCEHAGKCINTLG---------------SFECQCLQGYTGPRCEID------VNECVSN-PCQN--DATCL 60 (135)
T ss_dssp CCTTTSSSCSSSTTCEEEECSS---------------SEEEECCTTEESTTSCEE------CCTTTTC-CCCS--SCEEE
T ss_pred cccccCCCCCCCCCCEeECCCC---------------CEEEECCCCCcCCccccc------CccCCCC-CCCC--CCEEe
Confidence 688874 348999999988776 899999999999999853 5778765 7998 89998
Q ss_pred C--CCceeeCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCeeeCC--CcEEeCCCCCcCCCccccC
Q psy6207 509 P--GSGQCVCRPGGAGQLCDRPCSEGRYGQNCTQECRCMNGAACNPQ--DGTCLCPAGYYGPLCQKRC 572 (823)
Q Consensus 509 ~--~~~~C~C~~G~~G~~C~~~c~~g~~~~~C~~~c~C~~~g~C~~~--~~~C~C~~G~~G~~C~~~c 572 (823)
+ ++|+|+|++||+|..|+.. +++|... +|.++|+|+++ .|+|+|++||+|..|+.++
T Consensus 61 ~~~g~~~C~C~~G~~G~~C~~~------~~~C~~~-~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~i 121 (135)
T 2vj3_A 61 DQIGEFQCICMPGYEGVHCEVN------TDECASS-PCLHNGRCLDKINEFQCECPTGFTGHLCQVDL 121 (135)
T ss_dssp ECSSCEEEECCTTEESSSSCEE------CCTTTTC-CSTTTCEEEECSSCEEEECCTTEESSSSCEEC
T ss_pred CCCCCceeeCCCCCcCCcceec------CCcccCC-CcCCCCEeECCCCCeEEECCCCCcCCccCccC
Confidence 6 4789999999999999854 5789877 99999999986 5699999999999998543
No 12
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.52 E-value=1.9e-14 Score=168.38 Aligned_cols=139 Identities=27% Similarity=0.704 Sum_probs=102.9
Q ss_pred CCCCCCCCcccC--C---CceeeCCCCCCCCCCCCCCCCCcc----CCCCCCC---CCCCCCCeeeCCCcEEeCC----C
Q psy6207 498 LCSKEGSASCSP--G---SGQCVCRPGGAGQLCDRPCSEGRY----GQNCTQE---CRCMNGAACNPQDGTCLCP----A 561 (823)
Q Consensus 498 ~C~~~g~g~C~~--~---~~~C~C~~G~~G~~C~~~c~~g~~----~~~C~~~---c~C~~~g~C~~~~~~C~C~----~ 561 (823)
+|.+ +++|++ + .++|.|++||+|.+|+.+. +++ .++|... .+|+++|+|+ .++|.|+ +
T Consensus 441 pc~n--~~~C~~g~G~~~~G~C~C~~Gy~G~~Ce~~~--~~~~~~~~~~C~~~~~~~~Cs~~G~C~--~g~C~C~~~~~~ 514 (690)
T 3fcs_B 441 AEPN--SHRCNNGNGTFECGVCRCGPGWLGSQCECSE--EDYRPSQQDECSPREGQPVCSQRGECL--CGQCVCHSSDFG 514 (690)
T ss_dssp CCTT--CTTTTTTSEEEETTEEEECTTCCSSSSCCSC--C------CCCCSSSSSSCGGGGSEEEC--SSSEEECCCSSC
T ss_pred CCCC--CCcccCCCCeEeCCceEeCCCccCCceeecc--CccCCccCCcCCCCCCCCCCCCCCEEE--CCeeEeecCCCC
Confidence 4666 666653 2 3459999999999997532 111 2457642 1599999997 5899999 9
Q ss_pred CCcCCCccccCcCCcCCCCCCCC--CCCCCCCCCeeecCCCeEecCCCCCCCCccccCCCCCccCCCCCCC--CCCCCCC
Q psy6207 562 GYYGPLCQKRCEFMTYGRNCAQA--CTCFTENSQGCDIVTGKCICRPGFKGHRCETQCSNPNTYGEDCSLD--CGCNNGG 637 (823)
Q Consensus 562 G~~G~~C~~~c~~~~~g~~C~~~--~~C~~~~~~~C~~~~~~C~C~~G~~G~~C~~~c~~~~~~~~~C~~~--~~C~~~g 637 (823)
||+|..|+... ++|... .+| .++|+|.. ++|+|++||+|..|+-. .+ .++|... .+|.++|
T Consensus 515 Gy~G~~Ce~~~------~~C~~~~~~~C--~~~G~C~~--g~C~C~~Gy~G~~CeC~-~~----~~~C~~~~g~~C~~~G 579 (690)
T 3fcs_B 515 KITGKYCECDD------FSCVRYKGEMC--SGHGQCSC--GDCLCDSDWTGYYCNCT-TR----TDTCMSSNGLLCSGRG 579 (690)
T ss_dssp CCBSTTSCBCS------SCCCBSSSSBG--GGSEEEET--TEEEECTTEESSSSCEE-CC----CTTTBCTTSSBTSSSC
T ss_pred CeeCCCcCccc------CcCcCCCCCCC--CCCCEecC--CeeECcCCCcCCCCccC-CC----CCcccCCCCCCCCCCC
Confidence 99999998432 245531 368 78899976 89999999999999811 01 4577642 2799999
Q ss_pred eecCCCCeeec-CCCCCCCCCCC
Q psy6207 638 TCNQLDGGCNC-GRGYQGKLCTA 659 (823)
Q Consensus 638 ~C~~~~~~C~C-~~Gy~G~~C~~ 659 (823)
+|++ ++|.| ++||+|..|++
T Consensus 580 ~C~~--g~C~C~~~Gy~G~~Ce~ 600 (690)
T 3fcs_B 580 KCEC--GSCVCIQPGSYGDTCEK 600 (690)
T ss_dssp EEET--TEEECCSTTCBSTTSCB
T ss_pred EEeC--CEEECCCCCccCCCcCc
Confidence 9975 69999 99999999986
No 13
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.51 E-value=3.5e-14 Score=133.45 Aligned_cols=108 Identities=30% Similarity=0.809 Sum_probs=91.3
Q ss_pred CCCCC--CCCCCCCCCeeeCC--CcEEeCCCCCcCCCccccCcCCcCCCCCCCCCCCCCCCCCeeec--CCCeEecCCCC
Q psy6207 535 GQNCT--QECRCMNGAACNPQ--DGTCLCPAGYYGPLCQKRCEFMTYGRNCAQACTCFTENSQGCDI--VTGKCICRPGF 608 (823)
Q Consensus 535 ~~~C~--~~c~C~~~g~C~~~--~~~C~C~~G~~G~~C~~~c~~~~~g~~C~~~~~C~~~~~~~C~~--~~~~C~C~~G~ 608 (823)
+++|+ .+ +|.++|+|+++ +|+|+|++||+|..|+.+. ++|... +| .++++|++ ++|+|+|++||
T Consensus 5 ideC~~~~~-~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~~------~~C~~~-~C--~~~~~C~~~~g~~~C~C~~G~ 74 (135)
T 2vj3_A 5 VDECSLGAN-PCEHAGKCINTLGSFECQCLQGYTGPRCEIDV------NECVSN-PC--QNDATCLDQIGEFQCICMPGY 74 (135)
T ss_dssp CCTTTSSSC-SSSTTCEEEECSSSEEEECCTTEESTTSCEEC------CTTTTC-CC--CSSCEEEECSSCEEEECCTTE
T ss_pred cccccCCCC-CCCCCCEeECCCCCEEEECCCCCcCCcccccC------ccCCCC-CC--CCCCEEeCCCCCceeeCCCCC
Confidence 68998 45 89999999987 5699999999999997543 357654 78 88899975 57899999999
Q ss_pred CCCCccccCCCCCccCCCCCCCCCCCCCCeecCC--CCeeecCCCCCCCCCCCC
Q psy6207 609 KGHRCETQCSNPNTYGEDCSLDCGCNNGGTCNQL--DGGCNCGRGYQGKLCTAP 660 (823)
Q Consensus 609 ~G~~C~~~c~~~~~~~~~C~~~~~C~~~g~C~~~--~~~C~C~~Gy~G~~C~~~ 660 (823)
+|..|++. +++|... +|.++|+|+++ .|+|+|++||+|..|++.
T Consensus 75 ~G~~C~~~-------~~~C~~~-~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~ 120 (135)
T 2vj3_A 75 EGVHCEVN-------TDECASS-PCLHNGRCLDKINEFQCECPTGFTGHLCQVD 120 (135)
T ss_dssp ESSSSCEE-------CCTTTTC-CSTTTCEEEECSSCEEEECCTTEESSSSCEE
T ss_pred cCCcceec-------CCcccCC-CcCCCCEeECCCCCeEEECCCCCcCCccCcc
Confidence 99999865 5789877 99999999986 459999999999999753
No 14
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.50 E-value=1e-14 Score=168.63 Aligned_cols=209 Identities=28% Similarity=0.697 Sum_probs=108.0
Q ss_pred CCCCCCCCcccCC-----------CCcccCCCCccCCCCCccCCCCCCcCCCCC----------ccccccCCCCCccccc
Q psy6207 73 CSCPVESMECSRI-----------DGNCSCPPGFRGAKCKERTCPDGLYGEGCD----------RTCECNVENTKLCVPV 131 (823)
Q Consensus 73 C~C~~~~~~C~~~-----------~~~C~C~~G~~G~~C~~~~C~~~~~g~~C~----------~~C~C~~~~~~~C~~~ 131 (823)
|.|.+++..|.+. .++|.|++||+|.+|+ +|.+++++..+. ..|.|+ +....|...
T Consensus 254 C~CnGHa~~C~p~~g~~~~~~g~~~g~C~C~~G~~G~~Ce--~C~~g~~~~p~~~~~c~~~~~~~~C~C~-~~~~~C~~d 330 (525)
T 4aqs_A 254 CFCYGHASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCE--LCMDFYHDLPWRPAEGRNSNACKKCNCN-EHSSSCHFD 330 (525)
T ss_dssp CCCTTBCSCEECC------CCSCCCCEECCCTTEESSSSC--EECTTCCSSCCCCCBTTBCCCCCCCCCT-TSCSEEEEC
T ss_pred eccCCccccCCCcCCcccCCCCCcCccccCcCCCcCCCCc--CCCCccCCCccCCCcccCCCcccccccC-CCCCCCCCC
Confidence 5677776566532 3579999999999999 677777765442 233332 122233221
Q ss_pred CCCCCCCccccCCcee-eccCCCCCCccccCCCCCCCCCCCCCC--------CCCCC-----CCeec--------CCCCc
Q psy6207 132 CTDECIRGTCIAPNTC-KCEVGFGGPTCNIECPEGHYGPDCKLA--------CQCEN-----GAGCD--------PNTGA 189 (823)
Q Consensus 132 c~~~C~~G~C~~~~~C-~C~~Gy~G~~C~~~c~~g~~g~~C~~~--------c~C~~-----~g~C~--------~~~g~ 189 (823)
...+....+.+.+.| .|..+|.|..|+ .|.++|++..+... +.|.. ...|. ...+.
T Consensus 331 -~~~c~~~~~~~gg~C~~C~~g~~G~~Ce-~C~~g~~~~~~~~~~~~~~~~~C~C~~~~~~~~~~C~~~~~~~~~~~~~~ 408 (525)
T 4aqs_A 331 -MAVFLATGNVSGGVCDNCQHNTMGRNCE-QCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQ 408 (525)
T ss_dssp -HHHHHHTTSSCCEEEESCCTTEESTTSC-EECTTEEECSSSCTTCTTCEEECCCCTTTBSGGGCCCCSCBGGGTBCSSC
T ss_pred -cccccccCccCCCcccCCCCCCCCCCcc-cccCcccccCCCCCCCCCCCcCCCCCCCCCCCCccccCCCCCCcCCCCCc
Confidence 001111112234455 699999999998 58888876543211 22221 12222 23468
Q ss_pred ccCCCCCcCCCCCCCCCCCCCCCCCCCC-----CCCCCCC------eecCCCCccccCCCCCCCCCCcCCCCCCCCCC--
Q psy6207 190 CDCLDGYMGTHCEEVCGPGRFGQNCSQE-----CQCRNGA------ECHPATGECSCQPGFTGSLCEERCPPGTHGPS-- 256 (823)
Q Consensus 190 C~C~~Gy~G~~C~~~C~~g~~g~~C~~~-----~~C~~~g------~C~~~~~~C~C~~G~~G~~C~~~C~~g~~g~~-- 256 (823)
|.|.++|.|.+|+. |++||+|..+... ++|.+++ .|+..+++|+|++||+|.+|+ .|.+||++..
T Consensus 409 C~C~~g~~G~~C~~-C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce-~C~~G~~g~~~~ 486 (525)
T 4aqs_A 409 CRCKLHVEGERCDV-CKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCD-QCLPQHWGLSND 486 (525)
T ss_dssp CCBCTTEETTTTCE-ECTTEECCCTTSTTSSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTC-C-----------
T ss_pred cCCCCCCCCCcccC-CCCCCcCCCCCCCCCCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCcc-cCCCCccCCCCC
Confidence 99999999999986 9999999887642 3565554 455557899999999999998 5999998753
Q ss_pred ---CCCCCCCCCCCee----cCCCCeeeCCCCCCCCCCCC
Q psy6207 257 ---CINRCRCQNGAIC----NPANGQCLCAPGWMGSVCNV 289 (823)
Q Consensus 257 ---C~~~c~C~~~g~C----~~~~g~C~C~~G~~G~~C~~ 289 (823)
|. .++|.++|.+ ...+++|+|++||+|.+|++
T Consensus 487 ~~~C~-~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 487 LDGCR-PCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp ----------------------------------------
T ss_pred CCCCc-CCCCCCCCccCCccCCCCCeeECCCCCcCCCCCC
Confidence 33 2467776654 44567999999999999973
No 15
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.50 E-value=3.2e-15 Score=148.76 Aligned_cols=141 Identities=17% Similarity=0.334 Sum_probs=105.9
Q ss_pred CCCCCCeeeCC--CcEEeCCCCCcCC---CccccCcCCcCCCCCCC---CCCCCCCCCCeeec-------CCCeEecCCC
Q psy6207 543 RCMNGAACNPQ--DGTCLCPAGYYGP---LCQKRCEFMTYGRNCAQ---ACTCFTENSQGCDI-------VTGKCICRPG 607 (823)
Q Consensus 543 ~C~~~g~C~~~--~~~C~C~~G~~G~---~C~~~c~~~~~g~~C~~---~~~C~~~~~~~C~~-------~~~~C~C~~G 607 (823)
+|.++ +|+++ +|+|.|++||+|. .|+++ ++|.. ..+| .++++|++ .+|+|+|++|
T Consensus 12 pC~ng-~C~~~~g~~~C~C~~G~~g~~~~~C~~i-------d~C~~~~~~~~C--~~~~~C~~~~~~~~~g~y~C~C~~G 81 (186)
T 1z1y_A 12 ICXNG-QLVQMSNHFXCMCNEGLVHLSENTCEEX-------NECXXETLGXAC--GEFGQCIENPDPAQVNMYXCGCIEG 81 (186)
T ss_dssp CCBTE-EEEECSSCEEEEECTTEEEEETTEEEEC-------CCCSGGGTTSEE--ETTEEEEECSSTTSSCSEEEEECTT
T ss_pred CCCCC-EeECCCCCeEeECCCCCccCCCCccCCC-------CcccCCCCCCCC--CCCCEeecCCCCcCCCCEECCCCCC
Confidence 89854 99987 5799999999987 77743 56763 3478 78899973 4789999999
Q ss_pred CCCCCccccCCCCCccCCCCCCCCCCCCCCeec----CC--CCeeecCCCCCCCCCCCCCCCCCcCCccccc--ccccCC
Q psy6207 608 FKGHRCETQCSNPNTYGEDCSLDCGCNNGGTCN----QL--DGGCNCGRGYQGKLCTAPCPEGQYGYNCKEE--CLTKGQ 679 (823)
Q Consensus 608 ~~G~~C~~~c~~~~~~~~~C~~~~~C~~~g~C~----~~--~~~C~C~~Gy~G~~C~~~c~~g~~g~~C~~~--c~c~~~ 679 (823)
|+|..++-. +++|+.. +|.++|+|+ ++ .|+|+|++||+|.... |..|+.. .+|.
T Consensus 82 ~~g~~~~C~-------~d~C~~~-~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~--------~~~C~~~~~~~C~-- 143 (186)
T 1z1y_A 82 YTLXEDTCV-------LDVCQYX-NCGESGECIVEYLSEIQSAGCSCAIGXVPNPED--------EXXCTXTGETACQ-- 143 (186)
T ss_dssp EEEETTEEE-------EGGGTTC-CCCTTEEEEEEEETTEEEEEEEECTEEEEETTT--------TTEEEEEECCCCC--
T ss_pred CccCCCCCC-------CCcCcCC-CCCCCCEEeeCCcCCCCCceEECCCCCcccCCC--------CCcceEcCCCccc--
Confidence 999865322 3789887 899999998 65 4699999999983211 1122211 1121
Q ss_pred CCCccccccccccccc-ccCceeeeeeeeceeeecccceeEeecccceeeecCCeeecccCcc
Q psy6207 680 DVPVRTAVSHALKVHM-GINARRYVNVRMVATFNTTLYLYLFVNLTYGILYKTLVRLRECEER 741 (823)
Q Consensus 680 ~~~~~~~~~~~~~~~c-~~~g~~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~G~~g~~C~~~ 741 (823)
.+| .+++ +|+++.++|+ |+|++||+|+.++..
T Consensus 144 -------------~~C~~~~~----------~C~n~~g~y~-------C~C~~G~~g~~~~~~ 176 (186)
T 1z1y_A 144 -------------LXCNTDNE----------VCXNVEGVYX-------CQCMEGFTFDXEXNV 176 (186)
T ss_dssp -------------CCCCTTTE----------EEEEETTEEE-------EEECTTCEEETTTTE
T ss_pred -------------ccccccCc----------ceecCCCCee-------eECCCCCccCccccc
Confidence 256 6888 9999999998 999999999988764
No 16
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.49 E-value=6.1e-14 Score=133.25 Aligned_cols=121 Identities=21% Similarity=0.426 Sum_probs=86.9
Q ss_pred CCCCCCCCCCCCCeecCC----CCeeecCCCCCCCCCCCCCCCCCcCCcccccccccCCCCCcccccccccccccccCce
Q psy6207 625 EDCSLDCGCNNGGTCNQL----DGGCNCGRGYQGKLCTAPCPEGQYGYNCKEECLTKGQDVPVRTAVSHALKVHMGINAR 700 (823)
Q Consensus 625 ~~C~~~~~C~~~g~C~~~----~~~C~C~~Gy~G~~C~~~c~~g~~g~~C~~~c~c~~~~~~~~~~~~~~~~~~c~~~g~ 700 (823)
|+|+.+ +|.++|+|++. .|+|+|++||+|..|+...........|.. +..+...+|.+++
T Consensus 1 d~C~~~-pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~--------------~~~C~~~~C~~~g- 64 (143)
T 4d90_A 1 DICDPN-PCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTS--------------AGPCTPNPCHNGG- 64 (143)
T ss_dssp --CCSC-CCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCC--------------CCTTSSCCCCTTC-
T ss_pred CcCCCC-cCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCcccccccccccc--------------CCcCCCCCCCCCC-
Confidence 467777 99999999974 469999999999999874221111122222 2233456788999
Q ss_pred eeeeeeeceeee-------cccceeEeecccceeeecCCeeecccCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeee
Q psy6207 701 RYVNVRMVATFN-------TTLYLYLFVNLTYGILYKTLVRLRECEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCL 771 (823)
Q Consensus 701 ~~~~~~~~~~C~-------~~~g~~~~~~~~~~C~C~~G~~g~~C~~~C~~g~~G~~C~~~C~C~~~g~C~~~--~~~C~ 771 (823)
+|+ ++.++|+ |+|++||+|..|+... +.|... +|.++|+|+++ +|+|+
T Consensus 65 ---------~C~~~~~~~~~~~~~~~-------C~C~~G~~G~~C~~~i------~~C~~~-~C~~~~~C~~~~g~~~C~ 121 (143)
T 4d90_A 65 ---------TCEISEAYRGDTFIGYV-------CKCPRGFNGIHCQHNI------NECEVE-PCKNGGICTDLVANYSCE 121 (143)
T ss_dssp ---------EEEECCCEETTEECCEE-------EECCTTEESTTSCEEC------CTTTTC-CSCTTCEEEEETTEEEEE
T ss_pred ---------EecCCCccccCCCCCeE-------eECcCCCcCCCcccCC------CcCCCC-CCCCCCEeECCCCCeEeE
Confidence 998 5666666 9999999999998430 223322 69999999986 57999
Q ss_pred CCCCCCCCCCCCC
Q psy6207 772 CAPGWMGSVCNVP 784 (823)
Q Consensus 772 C~~G~~G~~C~~~ 784 (823)
|++||+|+.|+..
T Consensus 122 C~~G~~G~~c~~~ 134 (143)
T 4d90_A 122 CPGEFMGRNCQYK 134 (143)
T ss_dssp CCTTCBSTTSCBC
T ss_pred CCCCCccCCceec
Confidence 9999999999864
No 17
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=99.49 E-value=8.1e-15 Score=141.85 Aligned_cols=123 Identities=34% Similarity=0.844 Sum_probs=103.4
Q ss_pred CCCCCCCeecCCC----Ccc-ccCCCCCCCCCCcCCCCCCCCCCCCC--------CCCCCCC------CeecCCCCeee-
Q psy6207 218 CQCRNGAECHPAT----GEC-SCQPGFTGSLCEERCPPGTHGPSCIN--------RCRCQNG------AICNPANGQCL- 277 (823)
Q Consensus 218 ~~C~~~g~C~~~~----~~C-~C~~G~~G~~C~~~C~~g~~g~~C~~--------~c~C~~~------g~C~~~~g~C~- 277 (823)
++|.++++|+..+ ++| .|++||+|.+|| .|+++|+++.+.. .+.|.++ ++|+..+++|+
T Consensus 1 C~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce-~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~ 79 (162)
T 1klo_A 1 CPCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCE-LCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLK 79 (162)
T ss_dssp CCSCTTCCEEECSSSCCEEECSCCTTEESTTSC-EECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCC
T ss_pred CcCcCcCcccccCCCCCEEeCCCCCCCcCCCCc-CCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccC
Confidence 3789999998643 589 799999999999 5999999876642 3467766 57987889995
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCC-------CCCCCCCCC------eecCCCCcccCCCCccCCCCCCCCCCCCCCCCC
Q psy6207 278 CAPGWMGSVCNVPCTPGMWGQGCT-------VPCECFNGA------SCHHVTGECQCEPGFKGQKCMDPCPEGTWGKQC 343 (823)
Q Consensus 278 C~~G~~G~~C~~~C~~g~~g~~C~-------~~~~C~~~g------~C~~~~g~C~C~~G~~G~~C~~~C~~~~~g~~C 343 (823)
|+++|+|.+|+ .|+++|||+.+. .++.|.+.+ +|+.++|+|+|++||+|.+|+ +|+.+|||...
T Consensus 80 C~~g~~G~~Ce-~C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd-~C~~g~~g~~~ 156 (162)
T 1klo_A 80 CIYNTAGFYCD-RCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCG-TCDPGYYNLQS 156 (162)
T ss_dssp BCTTEETTTTC-EECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCC-EECTTCBCGGG
T ss_pred CCCCCcCCCcC-cCchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCC-CCCCCcccCCC
Confidence 99999999999 599999999887 456787765 898889999999999999996 79999998764
No 18
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.46 E-value=1.1e-14 Score=144.88 Aligned_cols=140 Identities=17% Similarity=0.308 Sum_probs=104.8
Q ss_pred CCCCCCCCCCCeeec--CCCeEecCCCCCCC---CccccCCCCCccCCCCC----CCCCCCCCCeecCCC-------Cee
Q psy6207 583 QACTCFTENSQGCDI--VTGKCICRPGFKGH---RCETQCSNPNTYGEDCS----LDCGCNNGGTCNQLD-------GGC 646 (823)
Q Consensus 583 ~~~~C~~~~~~~C~~--~~~~C~C~~G~~G~---~C~~~c~~~~~~~~~C~----~~~~C~~~g~C~~~~-------~~C 646 (823)
...+| .+ ++|++ ++|+|+|++||+|. .|+ + +++|+ .. +|.++++|+++. |+|
T Consensus 9 ~~~pC--~n-g~C~~~~g~~~C~C~~G~~g~~~~~C~----~----id~C~~~~~~~-~C~~~~~C~~~~~~~~~g~y~C 76 (186)
T 1z1y_A 9 VDTIC--XN-GQLVQMSNHFXCMCNEGLVHLSENTCE----E----XNECXXETLGX-ACGEFGQCIENPDPAQVNMYXC 76 (186)
T ss_dssp TTCCC--BT-EEEEECSSCEEEEECTTEEEEETTEEE----E----CCCCSGGGTTS-EEETTEEEEECSSTTSSCSEEE
T ss_pred CCCCC--CC-CEeECCCCCeEeECCCCCccCCCCccC----C----CCcccCCCCCC-CCCCCCEeecCCCCcCCCCEEC
Confidence 44588 64 49975 57999999999998 555 3 68998 44 899999999865 489
Q ss_pred ecCCCCCCCCCCCCCCCCCcCCcccccccccCCCCCcccccccccccccccCceeeeeeeeceeee----cccceeEeec
Q psy6207 647 NCGRGYQGKLCTAPCPEGQYGYNCKEECLTKGQDVPVRTAVSHALKVHMGINARRYVNVRMVATFN----TTLYLYLFVN 722 (823)
Q Consensus 647 ~C~~Gy~G~~C~~~c~~g~~g~~C~~~c~c~~~~~~~~~~~~~~~~~~c~~~g~~~~~~~~~~~C~----~~~g~~~~~~ 722 (823)
+|++||+|..++- . ++++...+|.+++ +|+ ++.++|+
T Consensus 77 ~C~~G~~g~~~~C-----------~---------------~d~C~~~~C~~~g----------~C~~~~~~~~g~~~--- 117 (186)
T 1z1y_A 77 GCIEGYTLXEDTC-----------V---------------LDVCQYXNCGESG----------ECIVEYLSEIQSAG--- 117 (186)
T ss_dssp EECTTEEEETTEE-----------E---------------EGGGTTCCCCTTE----------EEEEEEETTEEEEE---
T ss_pred CCCCCCccCCCCC-----------C---------------CCcCcCCCCCCCC----------EEeeCCcCCCCCce---
Confidence 9999999875421 1 1112234577888 998 8888888
Q ss_pred ccceeeecCCeee-----cccCccCCCCCCCCCCCCCCCC-CCCCeecCC--CCeeeCCCCCCCCCCCCC
Q psy6207 723 LTYGILYKTLVRL-----RECEERCPPGTHGPSCINRCRC-QNGAICNPA--NGQCLCAPGWMGSVCNVP 784 (823)
Q Consensus 723 ~~~~C~C~~G~~g-----~~C~~~C~~g~~G~~C~~~C~C-~~~g~C~~~--~~~C~C~~G~~G~~C~~~ 784 (823)
|+|++||+| ..|+++ .-++|.+ +| +++++|+++ +|+|+|++||+|+.++..
T Consensus 118 ----C~C~~Gy~g~~~~~~~C~~~-----~~~~C~~--~C~~~~~~C~n~~g~y~C~C~~G~~g~~~~~~ 176 (186)
T 1z1y_A 118 ----CSCAIGXVPNPEDEXXCTXT-----GETACQL--XCNTDNEVCXNVEGVYXCQCMEGFTFDXEXNV 176 (186)
T ss_dssp ----EEECTEEEEETTTTTEEEEE-----ECCCCCC--CCCTTTEEEEEETTEEEEEECTTCEEETTTTE
T ss_pred ----EECCCCCcccCCCCCcceEc-----CCCcccc--cccccCcceecCCCCeeeECCCCCccCccccc
Confidence 999999999 667642 0012332 69 899999986 579999999999988763
No 19
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.44 E-value=2.4e-13 Score=129.14 Aligned_cols=113 Identities=30% Similarity=0.799 Sum_probs=88.8
Q ss_pred CCCCCCCCCCCCCeeeCC----CcEEeCCCCCcCCCccccCcCCc------CCCCCCCCCCCCCCCCCeee-------c-
Q psy6207 536 QNCTQECRCMNGAACNPQ----DGTCLCPAGYYGPLCQKRCEFMT------YGRNCAQACTCFTENSQGCD-------I- 597 (823)
Q Consensus 536 ~~C~~~c~C~~~g~C~~~----~~~C~C~~G~~G~~C~~~c~~~~------~g~~C~~~~~C~~~~~~~C~-------~- 597 (823)
|+|..+ +|.++|+|++. +|+|.|++||+|..|+....... ..++|... +| .++++|+ +
T Consensus 1 d~C~~~-pC~~~g~C~~~~~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~-~C--~~~g~C~~~~~~~~~~ 76 (143)
T 4d90_A 1 DICDPN-PCENGGICLPGLADGSFSCECPDGFTDPNCSSVVEVASDEEEPTSAGPCTPN-PC--HNGGTCEISEAYRGDT 76 (143)
T ss_dssp --CCSC-CCGGGCEEEC-----CCEEECCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSC-CC--CTTCEEEECCCEETTE
T ss_pred CcCCCC-cCCCCCEeeCCCCCCCEEeECCCCCCCCCCccCccccccccccccCCcCCCC-CC--CCCCEecCCCccccCC
Confidence 367767 99999999975 47999999999999986322111 12456543 78 8899997 2
Q ss_pred -CCCeEecCCCCCCCCccccCCCCCccCCCCCCCCCCCCCCeecCCC--CeeecCCCCCCCCCCCC
Q psy6207 598 -VTGKCICRPGFKGHRCETQCSNPNTYGEDCSLDCGCNNGGTCNQLD--GGCNCGRGYQGKLCTAP 660 (823)
Q Consensus 598 -~~~~C~C~~G~~G~~C~~~c~~~~~~~~~C~~~~~C~~~g~C~~~~--~~C~C~~Gy~G~~C~~~ 660 (823)
.+|+|+|++||+|..|++. +++|+.. +|.++++|+++. |+|+|++||+|++|+..
T Consensus 77 ~~~~~C~C~~G~~G~~C~~~-------i~~C~~~-~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~~ 134 (143)
T 4d90_A 77 FIGYVCKCPRGFNGIHCQHN-------INECEVE-PCKNGGICTDLVANYSCECPGEFMGRNCQYK 134 (143)
T ss_dssp ECCEEEECCTTEESTTSCEE-------CCTTTTC-CSCTTCEEEEETTEEEEECCTTCBSTTSCBC
T ss_pred CCCeEeECcCCCcCCCcccC-------CCcCCCC-CCCCCCEeECCCCCeEeECCCCCccCCceec
Confidence 4789999999999999854 6899877 999999999864 59999999999999874
No 20
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=99.42 E-value=1.1e-13 Score=159.89 Aligned_cols=226 Identities=22% Similarity=0.488 Sum_probs=100.7
Q ss_pred CCeeeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCeecCCCC--cccCCCCccCCCCCCCCCCCCCCCCCCCCCCCC
Q psy6207 273 NGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCEPGFKGQKCMDPCPEGTWGKQCVHYCSCP 350 (823)
Q Consensus 273 ~g~C~C~~G~~G~~C~~~C~~g~~g~~C~~~~~C~~~g~C~~~~g--~C~C~~G~~G~~C~~~C~~~~~g~~C~~~c~C~ 350 (823)
.++|.|++||+|.+|+ .|.++|++..+. .+++..... .|.|.. .+..|+.. .. .+.. ..+.
T Consensus 278 ~g~C~C~~G~~G~~Ce-~C~~g~~~~p~~-------~~~c~~~~~~~~C~C~~--~~~~C~~d--~~----~c~~-~~~~ 340 (525)
T 4aqs_A 278 HGHCMCRHNTKGLNCE-LCMDFYHDLPWR-------PAEGRNSNACKKCNCNE--HSSSCHFD--MA----VFLA-TGNV 340 (525)
T ss_dssp CCEECCCTTEESSSSC-EECTTCCSSCCC-------CCBTTBCCCCCCCCCTT--SCSEEEEC--HH----HHHH-TTSS
T ss_pred CccccCcCCCcCCCCc-CCCCccCCCccC-------CCcccCCCcccccccCC--CCCCCCCC--cc----cccc-cCcc
Confidence 4689999999999998 577777766542 223322221 444432 23333200 00 0000 0111
Q ss_pred CCCCeeecCCceEECCCCccCCCCCCccCCCCCCCCCCCCCCCCCCCCCCcccCCCcceEcCCCcc--cCCCCCCCCCCc
Q psy6207 351 VESMECSRIDGNCSCPPGFRGAKCKERTCPDGLYGEGCDRTCECNVENTKLCHAVTGKCECGPGWD--GLTCDRPCPITR 428 (823)
Q Consensus 351 ~~~g~C~~~~~~C~C~~G~~G~~C~~~~C~~g~~g~~C~~~~~C~~~~~~~C~~~~~~C~C~~G~~--G~~C~~~C~~~~ 428 (823)
++ +.| +.|.++|+|.+|+ .|.+++++..+... ........|.|...+. +..|+..
T Consensus 341 ~g-g~C------~~C~~g~~G~~Ce--~C~~g~~~~~~~~~---------~~~~~~~~C~C~~~~~~~~~~C~~~----- 397 (525)
T 4aqs_A 341 SG-GVC------DNCQHNTMGRNCE--QCKPFYFQHPERDI---------RDPNLCEPCTCDPAGSENGGICDGY----- 397 (525)
T ss_dssp CC-EEE------ESCCTTEESTTSC--EECTTEEECSSSCT---------TCTTCEEECCCCTTTBSGGGCCCCS-----
T ss_pred CC-Ccc------cCCCCCCCCCCcc--cccCcccccCCCCC---------CCCCCCcCCCCCCCCCCCCccccCC-----
Confidence 22 233 4699999999998 68888776543321 1111123444444332 2223210
Q ss_pred cCCCCCCCCCCCCCCcccCCCCccccccccccccccceeeccCCCCccCCCCCCCCCCCCCCCCCCCC-----cCCCCC-
Q psy6207 429 WGDNCSQHCNCKNDALCFPRNGTNTYQYFFLQSLTLFTFLSLTHSGFSGRHCEKPCPQGSYGQDCSQT-----CLCSKE- 502 (823)
Q Consensus 429 ~~~~C~~~~~C~~~g~C~~~~g~C~~~~~~~~~~~~~s~~C~C~~Gy~G~~C~~~C~~g~~g~~C~~~-----c~C~~~- 502 (823)
....+... ...|.|.++|.|.+|+. |+++|++..+... ++|.+.
T Consensus 398 ------------~~~~~~~~-----------------~~~C~C~~g~~G~~C~~-C~~Gy~G~~c~~~~~C~~C~C~~~g 447 (525)
T 4aqs_A 398 ------------TDFSVGLI-----------------AGQCRCKLHVEGERCDV-CKEGFYDLSAEDPYGCKSCACNPLG 447 (525)
T ss_dssp ------------CBGGGTBC-----------------SSCCCBCTTEETTTTCE-ECTTEECCCTTSTTSSEECCCCTTT
T ss_pred ------------CCCCcCCC-----------------CCccCCCCCCCCCcccC-CCCCCcCCCCCCCCCCccCCCCCCc
Confidence 00111111 23447778888888776 7777777666532 245440
Q ss_pred ---CCCcccCCCceeeCCCCCCCCCCCCCCCCCccC-----CCCCCCCCCCCCCeee----CCCcEEeCCCCCcCCCccc
Q psy6207 503 ---GSASCSPGSGQCVCRPGGAGQLCDRPCSEGRYG-----QNCTQECRCMNGAACN----PQDGTCLCPAGYYGPLCQK 570 (823)
Q Consensus 503 ---g~g~C~~~~~~C~C~~G~~G~~C~~~c~~g~~~-----~~C~~~c~C~~~g~C~----~~~~~C~C~~G~~G~~C~~ 570 (823)
.++.|...+++|.|++||+|.+|+. |.++|++ ++|.+. +|.++|++. ..+++|+|++||+|..|++
T Consensus 448 tc~~~~~Cd~~tg~C~C~~g~~G~~Ce~-C~~G~~g~~~~~~~C~~C-~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 448 TIPGGNPCDSETGYCYCKRLVTGQRCDQ-CLPQHWGLSNDLDGCRPC-DCDLGGALNNSCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp BCCSSCCBCTTTCCBCBCTTCCSTTTCC----------------------------------------------------
T ss_pred eecCCCcccCCCCEEECCCCCcCCCccc-CCCCccCCCCCCCCCcCC-CCCCCCccCCccCCCCCeeECCCCCcCCCCCC
Confidence 0445555688999999999999987 9999986 346544 788877654 4467999999999999974
No 21
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.38 E-value=2.4e-13 Score=158.61 Aligned_cols=171 Identities=32% Similarity=0.793 Sum_probs=119.9
Q ss_pred CCCCC-CccccCCceeeccCCCCCCccccCCCCCCCCC-----CCCCC---CCCCCCCeecCCCCcccCC------CCCc
Q psy6207 133 TDECI-RGTCIAPNTCKCEVGFGGPTCNIECPEGHYGP-----DCKLA---CQCENGAGCDPNTGACDCL------DGYM 197 (823)
Q Consensus 133 ~~~C~-~G~C~~~~~C~C~~Gy~G~~C~~~c~~g~~g~-----~C~~~---c~C~~~g~C~~~~g~C~C~------~Gy~ 197 (823)
+.+|. +|+|+ .++|.|++||+|..|+ |+.++++. .|... .+|+++|+|+ .++|.|+ +||+
T Consensus 434 s~~Cs~~G~C~-~g~C~C~~Gy~G~~Ce--c~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~--~G~C~C~~~~~~~~G~~ 508 (687)
T 3k6s_B 434 RSLCHGKGFLE-CGICRCDTGYIGKNCE--CQTQGRSSQELEGSCRKDNNSIICSGLGDCV--CGQCLCHTSDVPGKLIY 508 (687)
T ss_dssp SSTGGGSEEES-SSSEEECSSEESTTSC--EESSSCCCSGGGSTTSSSTTSCGGGSSEEEE--TTEEEECCCCSTTCCEE
T ss_pred CCCCCCCCEEe-CCEeEcCCCCcCCccc--ccCCcCCccccCCCCCCCCCCCcCCCCCEEe--CCEEEcCCCCCCCCCcc
Confidence 35674 78998 6899999999999998 44433322 35422 2599999997 5799999 9999
Q ss_pred CCCCCCCCCCCCCCCCCCC--CCCCCC--CCeecCCCCccccCCCCCCCCCCcCCCCCCCCCCCCC--CCCCCCCCeecC
Q psy6207 198 GTHCEEVCGPGRFGQNCSQ--ECQCRN--GAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCIN--RCRCQNGAICNP 271 (823)
Q Consensus 198 G~~C~~~C~~g~~g~~C~~--~~~C~~--~g~C~~~~~~C~C~~G~~G~~C~~~C~~g~~g~~C~~--~c~C~~~g~C~~ 271 (823)
|..|+.. ...|.. ..+|.+ +|+|+. ++|.|++||+|..|+ |+.. .+.|.. ..+|+++|+|+.
T Consensus 509 G~~Ce~~------~~~C~~~~~~~C~~~~~G~C~~--g~C~C~~G~~G~~Ce--c~~~--~~~C~~~~g~~Cs~~G~C~~ 576 (687)
T 3k6s_B 509 GQYCECD------TINCERYNGQVCGGPGRGLCFC--GKCRCHPGFEGSACQ--CERT--TEGCLNPRRVECSGRGRCRC 576 (687)
T ss_dssp STTSCEE------SSCSCEETTEETSHHHHEEEET--TEEEECTTCCSTTSC--SCCS--SCTTBCTTCSBTSSSCCBCS
T ss_pred ccccccc------cccccCCCCcCcCCCCCCeEEC--CEEEcCCCCcCCCCc--cCCC--CCCCCCCCCCCCCCCCcCCC
Confidence 9999831 134432 125888 999984 799999999999998 2211 134432 137899999964
Q ss_pred CCCeeeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCeecCCCCcccC-CCCccCCCCCCCCC
Q psy6207 272 ANGQCLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHVTGECQC-EPGFKGQKCMDPCP 335 (823)
Q Consensus 272 ~~g~C~C~~G~~G~~C~~~C~~g~~g~~C~~~~~C~~~g~C~~~~g~C~C-~~G~~G~~C~~~C~ 335 (823)
++|.|++||+|..|++ |. .|. .+|.++++|+ +|.+ ..|..+..|+.+|.
T Consensus 577 --g~C~C~~Gy~G~~Ce~-c~------~C~--~~C~~~g~Cv----~C~~~~~G~~~~~C~~~C~ 626 (687)
T 3k6s_B 577 --NVCECHSGYQLPLCQE-CP------GCP--SPCGKYISCA----ECLKFEKGPFGKNCSAACP 626 (687)
T ss_dssp --SCBCCSTTCCTTTTCC-CT------TSC--CCCTTTHHHH----TTTTSCSCCCSSCSSSSCC
T ss_pred --CEEECCCCCcCCCCCC-CC------CCC--cccCCCCCCC----cccCCCCCCCCcccccccC
Confidence 8999999999999995 31 232 2688888885 4554 23444555655554
No 22
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.32 E-value=6.3e-13 Score=155.03 Aligned_cols=171 Identities=27% Similarity=0.675 Sum_probs=119.0
Q ss_pred CCCCCCCcccCCCCccccccccccccccceeeccCCCCccCCCCCCCCCCCCCC-----CCCCCC---cCCCCCCCCccc
Q psy6207 437 CNCKNDALCFPRNGTNTYQYFFLQSLTLFTFLSLTHSGFSGRHCEKPCPQGSYG-----QDCSQT---CLCSKEGSASCS 508 (823)
Q Consensus 437 ~~C~~~g~C~~~~g~C~~~~~~~~~~~~~s~~C~C~~Gy~G~~C~~~C~~g~~g-----~~C~~~---c~C~~~g~g~C~ 508 (823)
.+|.++|+|. .+. |.|++||+|..|+. ..+++. ..|... .+|.+ +|+|+
T Consensus 435 ~~Cs~~G~C~--~g~-----------------C~C~~Gy~G~~Cec--~~~~~~~~~~~~~C~~~~~~~~Cs~--~G~C~ 491 (687)
T 3k6s_B 435 SLCHGKGFLE--CGI-----------------CRCDTGYIGKNCEC--QTQGRSSQELEGSCRKDNNSIICSG--LGDCV 491 (687)
T ss_dssp STGGGSEEES--SSS-----------------EEECSSEESTTSCE--ESSSCCCSGGGSTTSSSTTSCGGGS--SEEEE
T ss_pred CCCCCCCEEe--CCE-----------------eEcCCCCcCCcccc--cCCcCCccccCCCCCCCCCCCcCCC--CCEEe
Confidence 3777777775 344 49999999999993 222221 135432 24888 89997
Q ss_pred CCCceeeCC------CCCCCCCCCCCCCCCccCCCCCCC--CCCCC--CCeeeCCCcEEeCCCCCcCCCccccCcCCcCC
Q psy6207 509 PGSGQCVCR------PGGAGQLCDRPCSEGRYGQNCTQE--CRCMN--GAACNPQDGTCLCPAGYYGPLCQKRCEFMTYG 578 (823)
Q Consensus 509 ~~~~~C~C~------~G~~G~~C~~~c~~g~~~~~C~~~--c~C~~--~g~C~~~~~~C~C~~G~~G~~C~~~c~~~~~g 578 (823)
.++|.|+ +||+|..|+.. ...|... -+|.+ +|+|+. ++|.|++||+|..|+.....
T Consensus 492 --~G~C~C~~~~~~~~G~~G~~Ce~~------~~~C~~~~~~~C~~~~~G~C~~--g~C~C~~G~~G~~Cec~~~~---- 557 (687)
T 3k6s_B 492 --CGQCLCHTSDVPGKLIYGQYCECD------TINCERYNGQVCGGPGRGLCFC--GKCRCHPGFEGSACQCERTT---- 557 (687)
T ss_dssp --TTEEEECCCCSTTCCEESTTSCEE------SSCSCEETTEETSHHHHEEEET--TEEEECTTCCSTTSCSCCSS----
T ss_pred --CCEEEcCCCCCCCCCccccccccc------cccccCCCCcCcCCCCCCeEEC--CEEEcCCCCcCCCCccCCCC----
Confidence 4699999 99999999842 2456521 16888 999974 79999999999999821101
Q ss_pred CCCCC--CCCCCCCCCCeeecCCCeEecCCCCCCCCccccCCCCCccCCCCCCCCCCCCCCeecCCCCeeec-CCCCCCC
Q psy6207 579 RNCAQ--ACTCFTENSQGCDIVTGKCICRPGFKGHRCETQCSNPNTYGEDCSLDCGCNNGGTCNQLDGGCNC-GRGYQGK 655 (823)
Q Consensus 579 ~~C~~--~~~C~~~~~~~C~~~~~~C~C~~G~~G~~C~~~c~~~~~~~~~C~~~~~C~~~g~C~~~~~~C~C-~~Gy~G~ 655 (823)
+.|.. ..+| .++|+|+. ++|+|++||+|..|++ | ..|. . +|.+++.|+ +|.+ ..|..+.
T Consensus 558 ~~C~~~~g~~C--s~~G~C~~--g~C~C~~Gy~G~~Ce~-c-------~~C~-~-~C~~~g~Cv----~C~~~~~G~~~~ 619 (687)
T 3k6s_B 558 EGCLNPRRVEC--SGRGRCRC--NVCECHSGYQLPLCQE-C-------PGCP-S-PCGKYISCA----ECLKFEKGPFGK 619 (687)
T ss_dssp CTTBCTTCSBT--SSSCCBCS--SCBCCSTTCCTTTTCC-C-------TTSC-C-CCTTTHHHH----TTTTSCSCCCSS
T ss_pred CCCCCCCCCCC--CCCCcCCC--CEEECCCCCcCCCCCC-C-------CCCC-c-ccCCCCCCC----cccCCCCCCCCc
Confidence 23442 2368 78888976 6899999999999986 2 2353 2 899999997 4554 3444555
Q ss_pred CCCCCCC
Q psy6207 656 LCTAPCP 662 (823)
Q Consensus 656 ~C~~~c~ 662 (823)
.|+..|+
T Consensus 620 ~C~~~C~ 626 (687)
T 3k6s_B 620 NCSAACP 626 (687)
T ss_dssp CSSSSCC
T ss_pred ccccccC
Confidence 6666554
No 23
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.15 E-value=1.5e-11 Score=116.66 Aligned_cols=107 Identities=26% Similarity=0.597 Sum_probs=81.3
Q ss_pred CCCCCCCCcccCCCceeeCCCCCCC---------CCCCCCCCCCccCCCCCCC--CCCCCCCeeeCC--CcEEeCCCCCc
Q psy6207 498 LCSKEGSASCSPGSGQCVCRPGGAG---------QLCDRPCSEGRYGQNCTQE--CRCMNGAACNPQ--DGTCLCPAGYY 564 (823)
Q Consensus 498 ~C~~~g~g~C~~~~~~C~C~~G~~G---------~~C~~~c~~g~~~~~C~~~--c~C~~~g~C~~~--~~~C~C~~G~~ 564 (823)
+|.+ +++|++ +|+|+|++||+| ..|++ +++|+.. .+|.++++|+++ +|+|+|++||+
T Consensus 8 ~C~~--~~~C~~-~~~C~C~~G~~g~~~~~~~~~~~C~d-------ideC~~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~ 77 (143)
T 2bou_A 8 WCPQ--DSSCVN-ATACRCNPGFSSFSEIITTPMETCDD-------INECATLSKVSCGKFSDCWNTEGSYDCVCSPGYE 77 (143)
T ss_dssp TCCT--TEEESS-SSCEEECTTEECSSSSBCSTTCCCEE-------CCGGGC----CCCTTEEEEECSSCEEEEECTTEE
T ss_pred cCCC--CCEEcC-CCEEeCCCCCcCccccccCCCCcCCc-------cccccCCCCCCCCCCCEEEcCCCCeEeECCCCcc
Confidence 4888 899986 599999999998 45643 5899863 279999999987 57999999999
Q ss_pred CCCccc--------cCcCCcCCCCCCC-CCCCCCCCCCeeec--CCCeEecCCCCCCCCccccCCC
Q psy6207 565 GPLCQK--------RCEFMTYGRNCAQ-ACTCFTENSQGCDI--VTGKCICRPGFKGHRCETQCSN 619 (823)
Q Consensus 565 G~~C~~--------~c~~~~~g~~C~~-~~~C~~~~~~~C~~--~~~~C~C~~G~~G~~C~~~c~~ 619 (823)
|..++. .|.. .++|.. ..+| .++++|++ ++|+|+|++||+|......|.+
T Consensus 78 g~~~~~~~~~~~~~~C~d---ideC~~~~~~C--~~~~~C~n~~g~y~C~C~~Gy~g~~~~~~C~~ 138 (143)
T 2bou_A 78 PVSGAKTFKNESENTCQD---VDECSSGQHQC--DSSTVCFNTVGSYSCRCRPGWKPRHGIPNNQK 138 (143)
T ss_dssp ETTCCSCBSSGGGCCEEE---CCHHHHTCCCC--CTTSEEEECSSCEEEECCSSSCBCTTCCSSBT
T ss_pred cCcCccccccCCCCCcCC---ccCccCcCCCC--CCCCEEECCCCCEEeeCCCCcccCCCCccCcc
Confidence 874432 1111 145653 3478 78899975 5899999999999988776655
No 24
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=99.14 E-value=5.2e-11 Score=112.89 Aligned_cols=122 Identities=16% Similarity=0.297 Sum_probs=83.6
Q ss_pred CCCCCCeecCCCCeeecCCCCCCCCCCCCCCCCCcCCcccccccccCCCCCcccccccccccccccCceeeeeeeeceee
Q psy6207 632 GCNNGGTCNQLDGGCNCGRGYQGKLCTAPCPEGQYGYNCKEECLTKGQDVPVRTAVSHALKVHMGINARRYVNVRMVATF 711 (823)
Q Consensus 632 ~C~~~g~C~~~~~~C~C~~Gy~G~~C~~~c~~g~~g~~C~~~c~c~~~~~~~~~~~~~~~~~~c~~~g~~~~~~~~~~~C 711 (823)
+|.++|+|++. |+|+|++||+|.. +..- ..+..|++..+|.. ....+|.+++ +|
T Consensus 8 ~C~~~~~C~~~-~~C~C~~G~~g~~-~~~~---~~~~~C~dideC~~-----------~~~~~C~~~~----------~C 61 (143)
T 2bou_A 8 WCPQDSSCVNA-TACRCNPGFSSFS-EIIT---TPMETCDDINECAT-----------LSKVSCGKFS----------DC 61 (143)
T ss_dssp TCCTTEEESSS-SCEEECTTEECSS-SSBC---STTCCCEECCGGGC---------------CCCTTE----------EE
T ss_pred cCCCCCEEcCC-CEEeCCCCCcCcc-cccc---CCCCcCCccccccC-----------CCCCCCCCCC----------EE
Confidence 89999999975 8999999999963 1100 11223332222320 0012687888 99
Q ss_pred ecccceeEeecccceeeecCCeeecccCccCCCCCCCCCCC--CCC-----CCCCCCeecCC--CCeeeCCCCCCCCCCC
Q psy6207 712 NTTLYLYLFVNLTYGILYKTLVRLRECEERCPPGTHGPSCI--NRC-----RCQNGAICNPA--NGQCLCAPGWMGSVCN 782 (823)
Q Consensus 712 ~~~~g~~~~~~~~~~C~C~~G~~g~~C~~~C~~g~~G~~C~--~~C-----~C~~~g~C~~~--~~~C~C~~G~~G~~C~ 782 (823)
+++.++|+ |+|++||+|..++..+. ...+..|+ ++| +|.++++|+++ +|+|+|++||+|....
T Consensus 62 ~n~~g~y~-------C~C~~Gy~g~~~~~~~~-~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~C~~Gy~g~~~~ 133 (143)
T 2bou_A 62 WNTEGSYD-------CVCSPGYEPVSGAKTFK-NESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCRCRPGWKPRHGI 133 (143)
T ss_dssp EECSSCEE-------EEECTTEEETTCCSCBS-SGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEECCSSSCBCTTC
T ss_pred EcCCCCeE-------eECCCCcccCcCccccc-cCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEeeCCCCcccCCCC
Confidence 99999888 99999999986654221 11233443 444 59999999987 6799999999999887
Q ss_pred CCCCC
Q psy6207 783 VPCTP 787 (823)
Q Consensus 783 ~~C~~ 787 (823)
..|.+
T Consensus 134 ~~C~~ 138 (143)
T 2bou_A 134 PNNQK 138 (143)
T ss_dssp CSSBT
T ss_pred ccCcc
Confidence 76655
No 25
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=99.09 E-value=6.2e-11 Score=102.78 Aligned_cols=84 Identities=24% Similarity=0.583 Sum_probs=67.6
Q ss_pred eeeccCCCCccCCCCCCCCCCCCCCCCCCCCcCCCCCCCCcccCCCceeeCCCCCCCCCCC-CCCCCCccCCCCCCCCCC
Q psy6207 466 TFLSLTHSGFSGRHCEKPCPQGSYGQDCSQTCLCSKEGSASCSPGSGQCVCRPGGAGQLCD-RPCSEGRYGQNCTQECRC 544 (823)
Q Consensus 466 s~~C~C~~Gy~G~~C~~~C~~g~~g~~C~~~c~C~~~g~g~C~~~~~~C~C~~G~~G~~C~-~~c~~g~~~~~C~~~c~C 544 (823)
||+|+|++||+|..|+. ++|... +|.+ . ..+|+|+|++||+ .|+ .. +++|..+ +|
T Consensus 1 sy~C~C~~g~~g~~c~~--------~~c~~~-pC~n--~----~~~y~C~C~~G~~--~C~~~~------~~~C~~~-pC 56 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQQ--------HQSWLR-PVLR--S----NRVEYCWCNSGRA--QCHSVP------VKSCSEP-RC 56 (91)
T ss_dssp CCCCCCBCSSSCCBCCS--------SCEEEE-ECSS--S----SCEEEEECSSSCC--BCCEEC------EEECSSC-CS
T ss_pred CeeeECCCCCcCCeECC--------CcccCC-cccc--C----CCCcEeECCCCCc--ccccCc------CCcccCC-CC
Confidence 58999999999998864 556543 5766 2 3589999999998 786 22 5889988 99
Q ss_pred CCCCeeeCC----CcEEeCCCCCcCCCccccCc
Q psy6207 545 MNGAACNPQ----DGTCLCPAGYYGPLCQKRCE 573 (823)
Q Consensus 545 ~~~g~C~~~----~~~C~C~~G~~G~~C~~~c~ 573 (823)
+++|+|+++ .|+|.|++||+|..|+.+++
T Consensus 57 ~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~id 89 (91)
T 1tpg_A 57 FNGGTCQQALYFSDFVCQCPEGFAGKSCEIDTR 89 (91)
T ss_dssp CTTCEEEEESSSSCEEEECCTTCBSSSCCBCSS
T ss_pred CCCCEeecCCCCCCeEeECCCCCcCCcCCcCCC
Confidence 999999964 56999999999999986543
No 26
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.96 E-value=1e-11 Score=120.43 Aligned_cols=133 Identities=24% Similarity=0.506 Sum_probs=89.8
Q ss_pred CCCCCCCcCCCCCCCCcccC--CCceeeCCCCCC----CCCCCCCCCCCccCCC--CCCC-CCC--CCCCeeeCC-----
Q psy6207 490 GQDCSQTCLCSKEGSASCSP--GSGQCVCRPGGA----GQLCDRPCSEGRYGQN--CTQE-CRC--MNGAACNPQ----- 553 (823)
Q Consensus 490 g~~C~~~c~C~~~g~g~C~~--~~~~C~C~~G~~----G~~C~~~c~~g~~~~~--C~~~-c~C--~~~g~C~~~----- 553 (823)
+++|+...+|. +++|++ ++|+|+|++||+ |..|++ +++ |... .+| .++++|+++
T Consensus 3 ideC~~~~~C~---~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d-------~~~~~C~~~~~~c~~~~~~~C~~~~~~~~ 72 (162)
T 1uzk_A 3 VNECLDPTTCI---SGNCVNTPGSYICDCPPDFELNPTRVGCVD-------TRSGNCYLDIRPRGDNGDTACSNEIGVGV 72 (162)
T ss_dssp CCGGGSTTSSB---TSEEEEETTEEEEECCTTCEECTTSSBEEC-------CCCEEEEEEC----------CEEEEEEEE
T ss_pred cccCCCCCCCC---CCEeECCCCCEEEeCCCCCeECCCCCcccC-------CCCCcccCCCcccCCCCCCcccCCcCCcc
Confidence 57787544785 489986 589999999998 888875 344 6542 023 457889875
Q ss_pred -CcEEeCCCCCc-CCCccccCcCCcCCCCCCCCCCCCCCCCCeeecCCCeEecCC--CCCCCCccccCCCCCccCCCCCC
Q psy6207 554 -DGTCLCPAGYY-GPLCQKRCEFMTYGRNCAQACTCFTENSQGCDIVTGKCICRP--GFKGHRCETQCSNPNTYGEDCSL 629 (823)
Q Consensus 554 -~~~C~C~~G~~-G~~C~~~c~~~~~g~~C~~~~~C~~~~~~~C~~~~~~C~C~~--G~~G~~C~~~c~~~~~~~~~C~~ 629 (823)
.|+|.|++||. |..|+. | ... ...+|+|+|++ ||+|+.-...|.+ +|||+.
T Consensus 73 ~~~~C~C~~G~~~~~~C~~----------------C--~~~---~~~~y~C~C~~g~G~~~~~~~~~c~d----ideC~~ 127 (162)
T 1uzk_A 73 SKASCCCSLGKAWGTPCEM----------------C--PAV---NTSEYKILCPGGEGFRPNPITVILED----IDECQE 127 (162)
T ss_dssp CHHHHHTTTCCEETTTTEE----------------C--CCT---TSHHHHHHCTTCTTEEECTTTCCEEE----CCHHHH
T ss_pred cCceeeCCCCCCcCCCccc----------------C--CCC---CCCCceeECCCCCCcccCCCCCccCc----cccccC
Confidence 46899999998 655541 2 111 02368999998 9998743333444 799985
Q ss_pred C-CCCCCCCeecCC--CCeeecCCCCCCCCCC
Q psy6207 630 D-CGCNNGGTCNQL--DGGCNCGRGYQGKLCT 658 (823)
Q Consensus 630 ~-~~C~~~g~C~~~--~~~C~C~~Gy~G~~C~ 658 (823)
. .+|.+ ++|+++ +|+|.|++||+|..-.
T Consensus 128 ~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~d~ 158 (162)
T 1uzk_A 128 LPGLCQG-GKCINTFGSFQCRCPTGYYLNEDT 158 (162)
T ss_dssp CGGGGBT-SEEEECSSCEEEECCTTCCBCTTT
T ss_pred CCCCcCC-CEeEcCCCCEEeeCCCCccCCCCC
Confidence 3 26986 799987 5699999999987543
No 27
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.93 E-value=1.4e-09 Score=125.48 Aligned_cols=148 Identities=20% Similarity=0.327 Sum_probs=98.8
Q ss_pred CCCCCCCCCCCCCCCeeecC---CCeE-ecCCCCCC--CCccccCCCCCccCCCCCCCCC--CCCCC---eecCC--CCe
Q psy6207 579 RNCAQACTCFTENSQGCDIV---TGKC-ICRPGFKG--HRCETQCSNPNTYGEDCSLDCG--CNNGG---TCNQL--DGG 645 (823)
Q Consensus 579 ~~C~~~~~C~~~~~~~C~~~---~~~C-~C~~G~~G--~~C~~~c~~~~~~~~~C~~~~~--C~~~g---~C~~~--~~~ 645 (823)
++|.. .+| .++++|++. +|+| .|++||+| ..|+ + ++||+.. + |.+++ +|+++ .|+
T Consensus 4 DeC~~-nPC--~~gg~C~n~~~Gsy~C~~C~~GytGdg~~Ce----D----iDEC~~~-p~~C~~gg~~~~CvNt~gsY~ 71 (634)
T 1yo8_A 4 DGCLS-NPC--FPGAQCSSFPDGSWSCGFCPVGFLGNGTHCE----D----LDECALV-PDICFSTSKVPRCVNTQPGFH 71 (634)
T ss_dssp CGGGG-CCS--CTTCCEEECTTSCEEECCCCTTBCSCSSSCC----B----CCTTTTS-CCCSCCCSSSCCEEECSSSEE
T ss_pred cccCC-CCC--CCCCEEecCCCCCeECCcCCCccCCCCCCcc----c----cccccCC-CCcccCCccccceeeccCcee
Confidence 45653 389 888999752 4999 99999999 4554 3 6899876 6 99999 99987 469
Q ss_pred ee-cCCCCCCCCCCCCCC--CCCcCCcccccccccCCCCCcccccccccccccccCceeeeeeeeceeeeccc----cee
Q psy6207 646 CN-CGRGYQGKLCTAPCP--EGQYGYNCKEECLTKGQDVPVRTAVSHALKVHMGINARRYVNVRMVATFNTTL----YLY 718 (823)
Q Consensus 646 C~-C~~Gy~G~~C~~~c~--~g~~g~~C~~~c~c~~~~~~~~~~~~~~~~~~c~~~g~~~~~~~~~~~C~~~~----g~~ 718 (823)
|. |++||+|..|+..-. ....+..|+...+|. ....+|.+++ +|+++. ++|
T Consensus 72 C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~------------~~~~pC~~~~----------~Cvnt~~~~~GsY 129 (634)
T 1yo8_A 72 CLPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCK------------DKTHNCHKHA----------ECIYLGHFSDPMY 129 (634)
T ss_dssp ECCCCTTEEECCCEESSSHHHHSCCCCEEECCTTT------------TTCCCCCTTE----------EEEECCTTCSSSE
T ss_pred cccCCCCcccCccccccccccccCCCccccccccc------------CCCcccccCc----------cccccccccccce
Confidence 99 999999998761100 000122343332332 1134788889 999988 888
Q ss_pred EeecccceeeecCCeee--cccCccCCCCCCCCCCCCCCCCCCCCeecCC-CCeee---CCCCC
Q psy6207 719 LFVNLTYGILYKTLVRL--RECEERCPPGTHGPSCINRCRCQNGAICNPA-NGQCL---CAPGW 776 (823)
Q Consensus 719 ~~~~~~~~C~C~~G~~g--~~C~~~C~~g~~G~~C~~~C~C~~~g~C~~~-~~~C~---C~~G~ 776 (823)
+ |+|++||+| ..|+.. .-+++|+.. .+.|... +|+|. |+.++
T Consensus 130 ~-------C~C~~Gy~GdG~~Ce~d--------~DiDeC~~~-~~~C~~~~~y~C~~dnC~~~p 177 (634)
T 1yo8_A 130 K-------CECQTGYAGDGLICGED--------SDLDGWPNL-NLVCATNATYHCIKDNCPHLP 177 (634)
T ss_dssp E-------EEECTTEEESSSSEEEC--------TTSSSSCSS-CCTTTTTCSSSCSCCSSTTSC
T ss_pred e-------eeccCCccccCcccccc--------cCcccccCC-CCcccCCCCcccccccccccc
Confidence 8 999999999 577632 013455422 3355533 56676 88765
No 28
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.92 E-value=8.5e-10 Score=95.58 Aligned_cols=82 Identities=23% Similarity=0.549 Sum_probs=65.0
Q ss_pred CceeeCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCeeeCCCcEEeCCCCCcCCCcc-ccCcCCcCCCCCCCCCCCCC
Q psy6207 511 SGQCVCRPGGAGQLCDRPCSEGRYGQNCTQECRCMNGAACNPQDGTCLCPAGYYGPLCQ-KRCEFMTYGRNCAQACTCFT 589 (823)
Q Consensus 511 ~~~C~C~~G~~G~~C~~~c~~g~~~~~C~~~c~C~~~g~C~~~~~~C~C~~G~~G~~C~-~~c~~~~~g~~C~~~~~C~~ 589 (823)
+|+|+|.+||+|..|+. ++|... +|.++ ...|+|.|++||+ .|+ .+. ++|... +|
T Consensus 1 sy~C~C~~g~~g~~c~~--------~~c~~~-pC~n~----~~~y~C~C~~G~~--~C~~~~~------~~C~~~-pC-- 56 (91)
T 1tpg_A 1 SYQVICRDEKTQMIYQQ--------HQSWLR-PVLRS----NRVEYCWCNSGRA--QCHSVPV------KSCSEP-RC-- 56 (91)
T ss_dssp CCCCCCBCSSSCCBCCS--------SCEEEE-ECSSS----SCEEEEECSSSCC--BCCEECE------EECSSC-CS--
T ss_pred CeeeECCCCCcCCeECC--------CcccCC-ccccC----CCCcEeECCCCCc--ccccCcC------CcccCC-CC--
Confidence 58999999999999864 677666 67654 2367999999998 786 222 357654 89
Q ss_pred CCCCeeec----CCCeEecCCCCCCCCcccc
Q psy6207 590 ENSQGCDI----VTGKCICRPGFKGHRCETQ 616 (823)
Q Consensus 590 ~~~~~C~~----~~~~C~C~~G~~G~~C~~~ 616 (823)
.++++|++ .+|+|+|++||+|..|++.
T Consensus 57 ~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ 87 (91)
T 1tpg_A 57 FNGGTCQQALYFSDFVCQCPEGFAGKSCEID 87 (91)
T ss_dssp CTTCEEEEESSSSCEEEECCTTCBSSSCCBC
T ss_pred CCCCEeecCCCCCCeEeECCCCCcCCcCCcC
Confidence 89999973 6799999999999999865
No 29
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.92 E-value=1.1e-09 Score=126.45 Aligned_cols=137 Identities=26% Similarity=0.522 Sum_probs=99.0
Q ss_pred CCCCCCCcCCCCCCCCcccCC---Ccee-eCCCCCCC--CCCCCCCCCCccCCCCCCCCC--CCCCC---eeeCC--CcE
Q psy6207 490 GQDCSQTCLCSKEGSASCSPG---SGQC-VCRPGGAG--QLCDRPCSEGRYGQNCTQECR--CMNGA---ACNPQ--DGT 556 (823)
Q Consensus 490 g~~C~~~c~C~~~g~g~C~~~---~~~C-~C~~G~~G--~~C~~~c~~g~~~~~C~~~c~--C~~~g---~C~~~--~~~ 556 (823)
+++|... +|.+ +++|++. +|+| .|++||+| ..|+. +++|... + |.+++ +|+++ +|+
T Consensus 3 IDeC~~n-PC~~--gg~C~n~~~Gsy~C~~C~~GytGdg~~CeD-------iDEC~~~-p~~C~~gg~~~~CvNt~gsY~ 71 (634)
T 1yo8_A 3 PDGCLSN-PCFP--GAQCSSFPDGSWSCGFCPVGFLGNGTHCED-------LDECALV-PDICFSTSKVPRCVNTQPGFH 71 (634)
T ss_dssp -CGGGGC-CSCT--TCCEEECTTSCEEECCCCTTBCSCSSSCCB-------CCTTTTS-CCCSCCCSSSCCEEECSSSEE
T ss_pred ccccCCC-CCCC--CCEEecCCCCCeECCcCCCccCCCCCCccc-------cccccCC-CCcccCCccccceeeccCcee
Confidence 4677644 8998 8999863 4999 99999998 78875 6899876 6 99999 99987 679
Q ss_pred Ee-CCCCCcCCCccc-----------cCcCCcCCCCCCC-CCCCCCCCCCeeec------CCCeEecCCCCCC--CCccc
Q psy6207 557 CL-CPAGYYGPLCQK-----------RCEFMTYGRNCAQ-ACTCFTENSQGCDI------VTGKCICRPGFKG--HRCET 615 (823)
Q Consensus 557 C~-C~~G~~G~~C~~-----------~c~~~~~g~~C~~-~~~C~~~~~~~C~~------~~~~C~C~~G~~G--~~C~~ 615 (823)
|. |++||+|..|+. .|.. .++|.. ..+| .++++|++ ++|+|+|++||+| ..|+.
T Consensus 72 C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~d---ideC~~~~~pC--~~~~~Cvnt~~~~~GsY~C~C~~Gy~GdG~~Ce~ 146 (634)
T 1yo8_A 72 CLPCPPRYRGNQPVGVGLEAAKTEKQVCEP---ENPCKDKTHNC--HKHAECIYLGHFSDPMYKCECQTGYAGDGLICGE 146 (634)
T ss_dssp ECCCCTTEEECCCEESSSHHHHSCCCCEEE---CCTTTTTCCCC--CTTEEEEECCTTCSSSEEEEECTTEEESSSSEEE
T ss_pred cccCCCCcccCccccccccccccCCCcccc---cccccCCCccc--ccCccccccccccccceeeeccCCccccCccccc
Confidence 99 999999988651 1221 256865 3579 88999974 5799999999998 57764
Q ss_pred cCCCCCccCCCCCCC-CCCCCCCeecCCCCeee---cCCCC
Q psy6207 616 QCSNPNTYGEDCSLD-CGCNNGGTCNQLDGGCN---CGRGY 652 (823)
Q Consensus 616 ~c~~~~~~~~~C~~~-~~C~~~g~C~~~~~~C~---C~~Gy 652 (823)
. .+ ++||... .+|..+ ..++|. |+.++
T Consensus 147 d-~D----iDeC~~~~~~C~~~-----~~y~C~~dnC~~~p 177 (634)
T 1yo8_A 147 D-SD----LDGWPNLNLVCATN-----ATYHCIKDNCPHLP 177 (634)
T ss_dssp C-TT----SSSSCSSCCTTTTT-----CSSSCSCCSSTTSC
T ss_pred c-cC----cccccCCCCcccCC-----CCcccccccccccc
Confidence 2 23 6788532 134432 245565 77654
No 30
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.83 E-value=1.1e-09 Score=99.98 Aligned_cols=87 Identities=25% Similarity=0.548 Sum_probs=63.1
Q ss_pred eeecc-cceeEeecccceeeecCCeeecccCccCCCCCCCCCCCCCCCCCCC---CeecCC-CCeeeCCCCCC---CCCC
Q psy6207 710 TFNTT-LYLYLFVNLTYGILYKTLVRLRECEERCPPGTHGPSCINRCRCQNG---AICNPA-NGQCLCAPGWM---GSVC 781 (823)
Q Consensus 710 ~C~~~-~g~~~~~~~~~~C~C~~G~~g~~C~~~C~~g~~G~~C~~~C~C~~~---g~C~~~-~~~C~C~~G~~---G~~C 781 (823)
+|+++ .++|+ |+|++||+|...+. +.|+++ |.++ ++|++. +|+|+|++||+ |..|
T Consensus 15 ~C~~~~~g~y~-------C~C~~Gy~g~~~~~--------~~C~~~--C~~~~C~~~C~~~~~y~C~C~~Gy~~~~g~~C 77 (118)
T 1dx5_I 15 QCQPLDQTSYL-------CVCAEGFAPIPHEP--------HRCQMF--CNQTACPADCDPNTQASCECPEGYILDDGFIC 77 (118)
T ss_dssp EEEECSSSCEE-------EECCTTEEEETTEE--------EEEEEC--CCSSEEECEECTTSTTCEECCTTEEEETTTEE
T ss_pred CCCCCCCCCEE-------eECCCCccccCCCC--------Cccccc--cCCCCCCCcccCCCCeEeECCCCccCCCCCcc
Confidence 89888 88888 99999999985421 122222 2222 688875 68999999999 7777
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCeeeccCc--eeecCCCCccC
Q psy6207 782 NVPCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCEPGFKGQ 822 (823)
Q Consensus 782 ~~~C~~~~~g~~C~~~c~C~~~~~C~~~~g--~C~C~~G~~G~ 822 (823)
+++ ++|....+| +++|+++.+ +|+|++||+|+
T Consensus 78 ~di-------deC~~~~~C--~~~C~n~~g~y~C~C~~G~~g~ 111 (118)
T 1dx5_I 78 TDI-------DECENGGFC--SGVCHNLPGTFECICGPDSALA 111 (118)
T ss_dssp EEC-------CHHHHCSSC--SSEEEECSSSEEEEECSSSSCE
T ss_pred ccc-------cccCCCCCC--cCeEEeCCCCEEEECCCCCccC
Confidence 542 344432367 789999875 99999999974
No 31
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=98.77 E-value=5.2e-10 Score=102.13 Aligned_cols=98 Identities=26% Similarity=0.617 Sum_probs=72.5
Q ss_pred CCCCCCCCCCCCCCcccCC-CCccccccccccccccceeeccCCCCccCCCCCCCCCCCCCCCCCCCCcCCCCCCC---C
Q psy6207 430 GDNCSQHCNCKNDALCFPR-NGTNTYQYFFLQSLTLFTFLSLTHSGFSGRHCEKPCPQGSYGQDCSQTCLCSKEGS---A 505 (823)
Q Consensus 430 ~~~C~~~~~C~~~g~C~~~-~g~C~~~~~~~~~~~~~s~~C~C~~Gy~G~~C~~~C~~g~~g~~C~~~c~C~~~g~---g 505 (823)
+++|+.. +|.+ +|+++ .+ +|+|+|++||+|...+. ++|... |.+ + +
T Consensus 4 ideC~~~-pC~~--~C~~~~~g---------------~y~C~C~~Gy~g~~~~~--------~~C~~~--C~~--~~C~~ 53 (118)
T 1dx5_I 4 VDPCFRA-NCEY--QCQPLDQT---------------SYLCVCAEGFAPIPHEP--------HRCQMF--CNQ--TACPA 53 (118)
T ss_dssp CCGGGGC-CCSS--EEEECSSS---------------CEEEECCTTEEEETTEE--------EEEEEC--CCS--SEEEC
T ss_pred cccCCCC-CCCC--CCCCCCCC---------------CEEeECCCCccccCCCC--------Cccccc--cCC--CCCCC
Confidence 5777644 7863 88876 55 89999999999985421 333321 332 2 5
Q ss_pred cccC-CCceeeCCCCCC---CCCCCCCCCCCccCCCCCC-CCCCCCCCeeeCC--CcEEeCCCCCcCCC
Q psy6207 506 SCSP-GSGQCVCRPGGA---GQLCDRPCSEGRYGQNCTQ-ECRCMNGAACNPQ--DGTCLCPAGYYGPL 567 (823)
Q Consensus 506 ~C~~-~~~~C~C~~G~~---G~~C~~~c~~g~~~~~C~~-~c~C~~~g~C~~~--~~~C~C~~G~~G~~ 567 (823)
+|++ ++|+|+|++||+ |..|++ +++|+. . +| +++|+++ +|+|.|++||+|..
T Consensus 54 ~C~~~~~y~C~C~~Gy~~~~g~~C~d-------ideC~~~~-~C--~~~C~n~~g~y~C~C~~G~~g~~ 112 (118)
T 1dx5_I 54 DCDPNTQASCECPEGYILDDGFICTD-------IDECENGG-FC--SGVCHNLPGTFECICGPDSALAG 112 (118)
T ss_dssp EECTTSTTCEECCTTEEEETTTEEEE-------CCHHHHCS-SC--SSEEEECSSSEEEEECSSSSCEE
T ss_pred cccCCCCeEeECCCCccCCCCCcccc-------ccccCCCC-CC--cCeEEeCCCCEEEECCCCCccCC
Confidence 6655 589999999999 888864 689987 5 88 7899987 67999999999853
No 32
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.77 E-value=4.8e-07 Score=108.06 Aligned_cols=166 Identities=20% Similarity=0.444 Sum_probs=108.1
Q ss_pred CCCCCCCeeecCCceE----ECCCCccCCCCCCccCCCCCCCCCCCCCCCCCCCCCCcccCCCcceE----cCCCcccCC
Q psy6207 348 SCPVESMECSRIDGNC----SCPPGFRGAKCKERTCPDGLYGEGCDRTCECNVENTKLCHAVTGKCE----CGPGWDGLT 419 (823)
Q Consensus 348 ~C~~~~g~C~~~~~~C----~C~~G~~G~~C~~~~C~~g~~g~~C~~~~~C~~~~~~~C~~~~~~C~----C~~G~~G~~ 419 (823)
.|.+ +.|++.+++| .|..|.....|....|.... -.|.+ +.|++..++|. |..|.....
T Consensus 182 ~C~~--g~Ci~~~~~CDg~~dC~dgsDE~~C~~~~C~~~~--------f~C~~---g~Ci~~~~~Cdg~~dC~dgsde~~ 248 (699)
T 1n7d_A 182 HCLS--GECIHSSWRCDGGPDCKDKSDEENCAVATCRPDE--------FQCSD---GNCIHGSRQCDREYDCKDMSDEVG 248 (699)
T ss_dssp CCSS--SCCCSTTCTTSSSCCSTTSCSSCSCCCCCCCSSE--------EESSS---SCEEETTCCSSSCCCSSSSCSSSS
T ss_pred ecCC--CceEechhccCCCCCCCCCcccccCCCcccCCCc--------EecCC---CceeeeecccCCCCCCCCCCccCC
Confidence 4544 3787777777 68888777777644454331 13443 47887777776 888888777
Q ss_pred CCCCCCCCccCCCCCC--CCCCCCCCcccCCCCccccccccccccccceeeccCCCCccCCCCCCCCCCCCCCCCCCCC-
Q psy6207 420 CDRPCPITRWGDNCSQ--HCNCKNDALCFPRNGTNTYQYFFLQSLTLFTFLSLTHSGFSGRHCEKPCPQGSYGQDCSQT- 496 (823)
Q Consensus 420 C~~~C~~~~~~~~C~~--~~~C~~~g~C~~~~g~C~~~~~~~~~~~~~s~~C~C~~Gy~G~~C~~~C~~g~~g~~C~~~- 496 (823)
|.. ..+|.. ...|.+ +.|++....| .+.+.|+.|+.+...+ |. .++|...
T Consensus 249 C~~-------~~~C~~~~~~~C~~-g~Ci~~~~~C-------------d~~~dC~dgsDe~~~~--C~----~~eC~~~~ 301 (699)
T 1n7d_A 249 CVN-------VTLCEGPNKFKCHS-GECITLDKVC-------------NMARDCRDWSDEPIKE--CG----TNECLDNN 301 (699)
T ss_dssp TTC-------CCCCCSTTCCCCTT-SCCCCSSCCS-------------CSSCCSSSSCSCCCSS--CC----CCCTTSST
T ss_pred CCC-------CCcccCCCceecCC-CcEeCCcccc-------------cccceecCcccccccc--cc----cccccccc
Confidence 754 244531 236755 5787765555 5667888887655321 10 2455432
Q ss_pred cCCCCCCCCcccC--CCceeeCCCCCC---CCCCCCCCCCCccCCCCCCCCCCCCCCeeeCC--CcEEeCCCCCcCC
Q psy6207 497 CLCSKEGSASCSP--GSGQCVCRPGGA---GQLCDRPCSEGRYGQNCTQECRCMNGAACNPQ--DGTCLCPAGYYGP 566 (823)
Q Consensus 497 c~C~~~g~g~C~~--~~~~C~C~~G~~---G~~C~~~c~~g~~~~~C~~~c~C~~~g~C~~~--~~~C~C~~G~~G~ 566 (823)
..| ..+|++ ++|+|.|++||+ |..|++ ++||....+|+ .+|+++ +|+|.|++||++.
T Consensus 302 ~~C----~~~C~~~~~~~~C~C~~G~~~~~~~~C~d-------ideC~~~~~C~--~~C~n~~g~y~C~C~~G~~~~ 365 (699)
T 1n7d_A 302 GGC----SHVCNDLKIGYECLCPDGFQLVAQRRCED-------IDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD 365 (699)
T ss_dssp TTS----CTTCCCCTTCCCCCCCSSSCCCSSSCCCC-------CCCCSSSSSCT--TTCCBCSSCBCCCCCSSCBCC
T ss_pred cCc----CCCcccCCCCcEEeCCCCeEcCCCCcccC-------ccccCCCCccc--cccccCCCCeeeeeecccccC
Confidence 123 235654 589999999999 778875 68997533785 379887 6799999999964
No 33
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.71 E-value=8.9e-10 Score=104.83 Aligned_cols=128 Identities=20% Similarity=0.333 Sum_probs=79.8
Q ss_pred CCCCCCCCCCCCCCeeeCC--CcEEeCCCCCcCCCccccCcCCcCCCCCCCCCCCCCCCCCeeecCCCeEecCCCCCCCC
Q psy6207 535 GQNCTQECRCMNGAACNPQ--DGTCLCPAGYYGPLCQKRCEFMTYGRNCAQACTCFTENSQGCDIVTGKCICRPGFKGHR 612 (823)
Q Consensus 535 ~~~C~~~c~C~~~g~C~~~--~~~C~C~~G~~G~~C~~~c~~~~~g~~C~~~~~C~~~~~~~C~~~~~~C~C~~G~~G~~ 612 (823)
+++|+.+ ||.+ |+|+++ +|+|+|++||+|..+...|.. . ....|.++|.|..
T Consensus 4 ideC~~~-pC~n-g~C~n~~g~y~C~C~~G~~g~~~~~~C~~---------------~---------~~~~C~~~~~g~~ 57 (147)
T 2w86_A 4 IDECESS-PCIN-GVCKNSPGSFICECSSESTLDPTKTICIE---------------T---------IKGTCWQTVIDGR 57 (147)
T ss_dssp CCGGGGC-CSBT-SEEEEETTEEEEECCTTEEECTTSSBEEE---------------C---------CCEEEEEEEETTE
T ss_pred CccCcCC-CCCC-CEeECCCCCEEeECCCCcccCCCCCeecC---------------C---------CCCcccCCCCCCc
Confidence 6899887 9985 799986 569999999998755432211 0 1234556677777
Q ss_pred ccccCCCCCccCCCCCC------CCCCCCCCeecCCCCeeecCCCCC---CCCCCCCCCCCCcCCcccccccccCCCCCc
Q psy6207 613 CETQCSNPNTYGEDCSL------DCGCNNGGTCNQLDGGCNCGRGYQ---GKLCTAPCPEGQYGYNCKEECLTKGQDVPV 683 (823)
Q Consensus 613 C~~~c~~~~~~~~~C~~------~~~C~~~g~C~~~~~~C~C~~Gy~---G~~C~~~c~~g~~g~~C~~~c~c~~~~~~~ 683 (823)
|+.. +++|.. ......++.|..-.++|+|++||+ |..|+++ ++|..
T Consensus 58 C~~~-------~~~c~~~~~C~~~~g~~~g~~C~~c~~~C~C~~Gy~~~~g~~C~di-------deC~~----------- 112 (147)
T 2w86_A 58 CEIN-------INGATLKSQCCSSLGAAWGSPCTLCQVDPICGKGYSRIKGTQCEDI-------DECEV----------- 112 (147)
T ss_dssp EEEE-------EEEEECHHHHHTTTCSEETTTTEECCCCTTTCTTEEEEETTEEEEC-------CHHHH-----------
T ss_pred cccC-------CCccccCCccccCcCcccCCCcccCCCcccCCCccccCCCCccCcc-------ccccC-----------
Confidence 7643 122211 001112233433347889999995 6666532 12211
Q ss_pred ccccccccccccccCceeeeeeeeceeeecccceeEeecccceeeecCCeeeccc
Q psy6207 684 RTAVSHALKVHMGINARRYVNVRMVATFNTTLYLYLFVNLTYGILYKTLVRLREC 738 (823)
Q Consensus 684 ~~~~~~~~~~~c~~~g~~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~G~~g~~C 738 (823)
.+.+|. ++ +|+++.|+|+ |.|++||+|+.-
T Consensus 113 -------~~~~C~-~g----------~C~n~~g~y~-------C~C~~Gy~g~~~ 142 (147)
T 2w86_A 113 -------FPGVCK-NG----------LCVNTRGSFK-------CQCPSGMTLDAT 142 (147)
T ss_dssp -------STTCSS-SS----------EEEEETTEEE-------EECCTTCCBCTT
T ss_pred -------CCCCCC-CC----------EEECCCCCEE-------eeCCCCCccCCC
Confidence 123465 57 9999999998 999999999753
No 34
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=98.65 E-value=3.1e-09 Score=102.79 Aligned_cols=122 Identities=22% Similarity=0.361 Sum_probs=76.1
Q ss_pred CCCCCCCCCCCCCCCeeec--CCCeEecCCCCC----CCCccccCCCCCccCCC--CCCC-CCC--CCCCeecCC-----
Q psy6207 579 RNCAQACTCFTENSQGCDI--VTGKCICRPGFK----GHRCETQCSNPNTYGED--CSLD-CGC--NNGGTCNQL----- 642 (823)
Q Consensus 579 ~~C~~~~~C~~~~~~~C~~--~~~~C~C~~G~~----G~~C~~~c~~~~~~~~~--C~~~-~~C--~~~g~C~~~----- 642 (823)
++|....+| . +++|++ ++|+|+|++||+ |..|+. +++ |... .+| .++++|++.
T Consensus 4 deC~~~~~C--~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d--------~~~~~C~~~~~~c~~~~~~~C~~~~~~~~ 72 (162)
T 1uzk_A 4 NECLDPTTC--I-SGNCVNTPGSYICDCPPDFELNPTRVGCVD--------TRSGNCYLDIRPRGDNGDTACSNEIGVGV 72 (162)
T ss_dssp CGGGSTTSS--B-TSEEEEETTEEEEECCTTCEECTTSSBEEC--------CCCEEEEEEC----------CEEEEEEEE
T ss_pred ccCCCCCCC--C-CCEeECCCCCEEEeCCCCCeECCCCCcccC--------CCCCcccCCCcccCCCCCCcccCCcCCcc
Confidence 567654578 5 589974 689999999998 667653 344 6542 123 357889875
Q ss_pred -CCeeecCCCCC-CCCCCC-----------CCCC--CCcCCcccccccccCCCCCccccccccc--ccccccCceeeeee
Q psy6207 643 -DGGCNCGRGYQ-GKLCTA-----------PCPE--GQYGYNCKEECLTKGQDVPVRTAVSHAL--KVHMGINARRYVNV 705 (823)
Q Consensus 643 -~~~C~C~~Gy~-G~~C~~-----------~c~~--g~~g~~C~~~c~c~~~~~~~~~~~~~~~--~~~c~~~g~~~~~~ 705 (823)
.|+|.|++||+ |..|+. .|++ ||.|..-.. ...+++++. ..+|. ++
T Consensus 73 ~~~~C~C~~G~~~~~~C~~C~~~~~~~y~C~C~~g~G~~~~~~~~----------~c~dideC~~~~~~C~-~g------ 135 (162)
T 1uzk_A 73 SKASCCCSLGKAWGTPCEMCPAVNTSEYKILCPGGEGFRPNPITV----------ILEDIDECQELPGLCQ-GG------ 135 (162)
T ss_dssp CHHHHHTTTCCEETTTTEECCCTTSHHHHHHCTTCTTEEECTTTC----------CEEECCHHHHCGGGGB-TS------
T ss_pred cCceeeCCCCCCcCCCcccCCCCCCCCceeECCCCCCcccCCCCC----------ccCccccccCCCCCcC-CC------
Confidence 46899999998 777763 1222 555431000 011233333 24576 58
Q ss_pred eeceeeecccceeEeecccceeeecCCeeecccC
Q psy6207 706 RMVATFNTTLYLYLFVNLTYGILYKTLVRLRECE 739 (823)
Q Consensus 706 ~~~~~C~~~~g~~~~~~~~~~C~C~~G~~g~~C~ 739 (823)
+|+++.|+|+ |+|++||+|..-.
T Consensus 136 ----~C~n~~gsy~-------C~C~~Gy~g~~d~ 158 (162)
T 1uzk_A 136 ----KCINTFGSFQ-------CRCPTGYYLNEDT 158 (162)
T ss_dssp ----EEEECSSCEE-------EECCTTCCBCTTT
T ss_pred ----EeEcCCCCEE-------eeCCCCccCCCCC
Confidence 9999999988 9999999997543
No 35
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.63 E-value=1.2e-08 Score=102.56 Aligned_cols=100 Identities=27% Similarity=0.705 Sum_probs=75.5
Q ss_pred CCCCCCeeeCCCcEEeCCCCCcCCCccccCcCCcC-----CCCCCC---CCCCCCCCCCeeecCCCeEecCCC------C
Q psy6207 543 RCMNGAACNPQDGTCLCPAGYYGPLCQKRCEFMTY-----GRNCAQ---ACTCFTENSQGCDIVTGKCICRPG------F 608 (823)
Q Consensus 543 ~C~~~g~C~~~~~~C~C~~G~~G~~C~~~c~~~~~-----g~~C~~---~~~C~~~~~~~C~~~~~~C~C~~G------~ 608 (823)
.|+++|+|+. ++|.|++||+|..|+. +...+ ...|.. ..+| .++|+|+. ++|+|++| |
T Consensus 97 ~Csg~G~C~~--g~C~C~~G~~G~~Cec--~~~~~~~~~~~~~C~~~~~~~~C--sg~G~C~~--g~C~C~~gw~~~~~~ 168 (217)
T 2p28_B 97 LCHGKGFLEC--GICRCDTGYIGKNCEC--QTQGRSSQELEGSCRKDNNSIIC--SGLGDCVC--GQCLCHTSDVPGKLI 168 (217)
T ss_dssp TTTTSEEEET--TEEEECTTEESTTSCE--ECCCCC-GGGGGGGBSSTTSCBG--GGTEEEET--TEEEECCCCSTTCCE
T ss_pred ccCCCceEEC--CEEECCCCccCCcccc--cCcccccccCCCcCCCCCCCCCC--CCCCEEeC--CceECCCCCCCcccE
Confidence 7899999974 8999999999999983 22111 123542 2468 78899984 68999999 6
Q ss_pred CCCCccccCCCCCccCCCCCCC--CCCCCC--CeecCCCCeeecCCCCCCCCCCC
Q psy6207 609 KGHRCETQCSNPNTYGEDCSLD--CGCNNG--GTCNQLDGGCNCGRGYQGKLCTA 659 (823)
Q Consensus 609 ~G~~C~~~c~~~~~~~~~C~~~--~~C~~~--g~C~~~~~~C~C~~Gy~G~~C~~ 659 (823)
+|..|+.. .++|... .+|.++ |+|+. ++|.|.+||+|..|+.
T Consensus 169 ~G~~Ce~~-------~~~C~~~~g~~C~~~~~G~C~~--g~C~C~~G~~G~~C~~ 214 (217)
T 2p28_B 169 YGQYCECD-------TINCERYNGQVCGGPGRGLCFC--GKCRCHPGFEGSACQH 214 (217)
T ss_dssp ESTTSCEE-------SSCSCEETTEETTCTTTEEEET--TEEEECTTEESTTSCE
T ss_pred ECCCcccC-------CccCCCCCCCCCCCCCCcEEeC--CeeECCCCCccCCcCC
Confidence 99999853 2355432 158888 99974 7999999999999875
No 36
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.59 E-value=1.7e-06 Score=103.22 Aligned_cols=163 Identities=20% Similarity=0.416 Sum_probs=104.8
Q ss_pred CCCCCCCCcccCCCcee----eCCCCCCCCCCCCCCCCCccCCCCCCC-CCCCCCCeeeCCCcEEe----CCCCCcCCCc
Q psy6207 498 LCSKEGSASCSPGSGQC----VCRPGGAGQLCDRPCSEGRYGQNCTQE-CRCMNGAACNPQDGTCL----CPAGYYGPLC 568 (823)
Q Consensus 498 ~C~~~g~g~C~~~~~~C----~C~~G~~G~~C~~~c~~g~~~~~C~~~-c~C~~~g~C~~~~~~C~----C~~G~~G~~C 568 (823)
.|.+ +.|++.+++| .|..|.....|.. .+|... -.|. +++|++..+.|. |..|.....|
T Consensus 182 ~C~~---g~Ci~~~~~CDg~~dC~dgsDE~~C~~--------~~C~~~~f~C~-~g~Ci~~~~~Cdg~~dC~dgsde~~C 249 (699)
T 1n7d_A 182 HCLS---GECIHSSWRCDGGPDCKDKSDEENCAV--------ATCRPDEFQCS-DGNCIHGSRQCDREYDCKDMSDEVGC 249 (699)
T ss_dssp CCSS---SCCCSTTCTTSSSCCSTTSCSSCSCCC--------CCCCSSEEESS-SSCEEETTCCSSSCCCSSSSCSSSST
T ss_pred ecCC---CceEechhccCCCCCCCCCcccccCCC--------cccCCCcEecC-CCceeeeecccCCCCCCCCCCccCCC
Confidence 3654 5888888888 6888887777753 244321 0566 468998877776 8888888777
Q ss_pred cccCcCCcCCCCCC--CCCCCCCCCCCeeecC----CCeEecCCCCCCCCccccCCCCCccCCCCCCC-CCCCCCCeecC
Q psy6207 569 QKRCEFMTYGRNCA--QACTCFTENSQGCDIV----TGKCICRPGFKGHRCETQCSNPNTYGEDCSLD-CGCNNGGTCNQ 641 (823)
Q Consensus 569 ~~~c~~~~~g~~C~--~~~~C~~~~~~~C~~~----~~~C~C~~G~~G~~C~~~c~~~~~~~~~C~~~-~~C~~~g~C~~ 641 (823)
... ..|. ....| . ++.|++. .+.+.|+.|+.+... .|. ++||+.. ..|. ++|++
T Consensus 250 ~~~-------~~C~~~~~~~C--~-~g~Ci~~~~~Cd~~~dC~dgsDe~~~--~C~-----~~eC~~~~~~C~--~~C~~ 310 (699)
T 1n7d_A 250 VNV-------TLCEGPNKFKC--H-SGECITLDKVCNMARDCRDWSDEPIK--ECG-----TNECLDNNGGCS--HVCND 310 (699)
T ss_dssp TCC-------CCCCSTTCCCC--T-TSCCCCSSCCSCSSCCSSSSCSCCCS--SCC-----CCCTTSSTTTSC--TTCCC
T ss_pred CCC-------CcccCCCceec--C-CCcEeCCcccccccceecCccccccc--ccc-----cccccccccCcC--CCccc
Confidence 541 2342 11245 3 3567643 356788888776542 221 4677653 1354 47887
Q ss_pred C--CCeeecCCCCC---CCCCCCCCCCCCcCCcccccccccCCCCCcccccccccccccccCceeeeeeeeceeeecccc
Q psy6207 642 L--DGGCNCGRGYQ---GKLCTAPCPEGQYGYNCKEECLTKGQDVPVRTAVSHALKVHMGINARRYVNVRMVATFNTTLY 716 (823)
Q Consensus 642 ~--~~~C~C~~Gy~---G~~C~~~c~~g~~g~~C~~~c~c~~~~~~~~~~~~~~~~~~c~~~g~~~~~~~~~~~C~~~~g 716 (823)
+ .|+|.|++||+ |..|++. ++|.. ..+|. . +|+|+.|
T Consensus 311 ~~~~~~C~C~~G~~~~~~~~C~di-------deC~~-------------------~~~C~--~----------~C~n~~g 352 (699)
T 1n7d_A 311 LKIGYECLCPDGFQLVAQRRCEDI-------DECQD-------------------PDTCS--Q----------LCVNLEG 352 (699)
T ss_dssp CTTCCCCCCCSSSCCCSSSCCCCC-------CCCSS-------------------SSSCT--T----------TCCBCSS
T ss_pred CCCCcEEeCCCCeEcCCCCcccCc-------cccCC-------------------CCccc--c----------ccccCCC
Confidence 5 57999999999 5555532 22221 11232 3 8999998
Q ss_pred eeEeecccceeeecCCeeec
Q psy6207 717 LYLFVNLTYGILYKTLVRLR 736 (823)
Q Consensus 717 ~~~~~~~~~~C~C~~G~~g~ 736 (823)
+|+ |.|++||++.
T Consensus 353 ~y~-------C~C~~G~~~~ 365 (699)
T 1n7d_A 353 GYK-------CQCEEGFQLD 365 (699)
T ss_dssp CBC-------CCCCSSCBCC
T ss_pred Cee-------eeeecccccC
Confidence 888 9999999975
No 37
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=98.59 E-value=4.2e-09 Score=100.17 Aligned_cols=110 Identities=20% Similarity=0.402 Sum_probs=72.8
Q ss_pred cccccccccccCceeeeeeeeceeeecccceeEeecccceeeecCCeeecccCccCC--------CCCCCCCCC---CCC
Q psy6207 687 VSHALKVHMGINARRYVNVRMVATFNTTLYLYLFVNLTYGILYKTLVRLRECEERCP--------PGTHGPSCI---NRC 755 (823)
Q Consensus 687 ~~~~~~~~c~~~g~~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~G~~g~~C~~~C~--------~g~~G~~C~---~~C 755 (823)
++++...+|. ++ +|+++.++|+ |+|++||+|..+...|. ++|.|..|+ ++|
T Consensus 4 ideC~~~pC~-ng----------~C~n~~g~y~-------C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c 65 (147)
T 2w86_A 4 IDECESSPCI-NG----------VCKNSPGSFI-------CECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGA 65 (147)
T ss_dssp CCGGGGCCSB-TS----------EEEEETTEEE-------EECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEE
T ss_pred CccCcCCCCC-CC----------EeECCCCCEE-------eECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCcc
Confidence 3444456786 58 9999999998 99999999986554433 233444454 222
Q ss_pred C----------CCCCCeecCCCCeeeCCCCCC---CCCCCCCCCCCCCCCCCCC-CCCCCCCCeeeccCc--eeecCCCC
Q psy6207 756 R----------CQNGAICNPANGQCLCAPGWM---GSVCNVPCTPGMWGQGCTV-PCECFNGASCHHVTG--ECQCEPGF 819 (823)
Q Consensus 756 ~----------C~~~g~C~~~~~~C~C~~G~~---G~~C~~~C~~~~~g~~C~~-~c~C~~~~~C~~~~g--~C~C~~G~ 819 (823)
. ...++.|..-.|+|+|++||+ |..|+++ ++|.. +.+|.+ |+|+++.+ +|.|++||
T Consensus 66 ~~~~~C~~~~g~~~g~~C~~c~~~C~C~~Gy~~~~g~~C~di-------deC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy 137 (147)
T 2w86_A 66 TLKSQCCSSLGAAWGSPCTLCQVDPICGKGYSRIKGTQCEDI-------DECEVFPGVCKN-GLCVNTRGSFKCQCPSGM 137 (147)
T ss_dssp ECHHHHHTTTCSEETTTTEECCCCTTTCTTEEEEETTEEEEC-------CHHHHSTTCSSS-SEEEEETTEEEEECCTTC
T ss_pred ccCCccccCcCcccCCCcccCCCcccCCCccccCCCCccCcc-------ccccCCCCCCCC-CEEECCCCCEEeeCCCCC
Confidence 1 011223332247889999995 8888742 34442 235886 59999876 99999999
Q ss_pred ccC
Q psy6207 820 KGQ 822 (823)
Q Consensus 820 ~G~ 822 (823)
+|+
T Consensus 138 ~g~ 140 (147)
T 2w86_A 138 TLD 140 (147)
T ss_dssp CBC
T ss_pred ccC
Confidence 986
No 38
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.56 E-value=6.3e-08 Score=97.41 Aligned_cols=108 Identities=24% Similarity=0.408 Sum_probs=72.3
Q ss_pred CCCCCCeecCCCCeeecCCCCCCCCCCCCCCCCCcCCcccccccccCCCCCcccccccccccccccCceeeeeeeeceee
Q psy6207 632 GCNNGGTCNQLDGGCNCGRGYQGKLCTAPCPEGQYGYNCKEECLTKGQDVPVRTAVSHALKVHMGINARRYVNVRMVATF 711 (823)
Q Consensus 632 ~C~~~g~C~~~~~~C~C~~Gy~G~~C~~~c~~g~~g~~C~~~c~c~~~~~~~~~~~~~~~~~~c~~~g~~~~~~~~~~~C 711 (823)
.|+++|+|+. ++|+|++||+|.+|+. +.+.+...+.. -.|. ......+|.++| +|
T Consensus 97 ~Csg~G~C~~--g~C~C~~G~~G~~Cec--~~~~~~~~~~~-~~C~----------~~~~~~~Csg~G----------~C 151 (217)
T 2p28_B 97 LCHGKGFLEC--GICRCDTGYIGKNCEC--QTQGRSSQELE-GSCR----------KDNNSIICSGLG----------DC 151 (217)
T ss_dssp TTTTSEEEET--TEEEECTTEESTTSCE--ECCCCC-GGGG-GGGB----------SSTTSCBGGGTE----------EE
T ss_pred ccCCCceEEC--CEEECCCCccCCcccc--cCcccccccCC-CcCC----------CCCCCCCCCCCC----------EE
Confidence 7899999974 8999999999999983 33222111100 0111 111245688899 99
Q ss_pred ecccceeEeecccceeeecCC------eeecccCccCCCCCCCCCCCCC--CCCCCC--CeecCCCCeeeCCCCCCCCCC
Q psy6207 712 NTTLYLYLFVNLTYGILYKTL------VRLRECEERCPPGTHGPSCINR--CRCQNG--AICNPANGQCLCAPGWMGSVC 781 (823)
Q Consensus 712 ~~~~g~~~~~~~~~~C~C~~G------~~g~~C~~~C~~g~~G~~C~~~--C~C~~~--g~C~~~~~~C~C~~G~~G~~C 781 (823)
+. + + |+|.+| |+|..|+.. . ..|... -+|+++ |+|+. ++|.|.+||+|..|
T Consensus 152 ~~--g--~-------C~C~~gw~~~~~~~G~~Ce~~--~----~~C~~~~g~~C~~~~~G~C~~--g~C~C~~G~~G~~C 212 (217)
T 2p28_B 152 VC--G--Q-------CLCHTSDVPGKLIYGQYCECD--T----INCERYNGQVCGGPGRGLCFC--GKCRCHPGFEGSAC 212 (217)
T ss_dssp ET--T--E-------EEECCCCSTTCCEESTTSCEE--S----SCSCEETTEETTCTTTEEEET--TEEEECTTEESTTS
T ss_pred eC--C--c-------eECCCCCCCcccEECCCcccC--C----ccCCCCCCCCCCCCCCcEEeC--CeeECCCCCccCCc
Confidence 84 3 3 789999 788888732 0 122211 148877 99985 69999999999998
Q ss_pred CC
Q psy6207 782 NV 783 (823)
Q Consensus 782 ~~ 783 (823)
+.
T Consensus 213 ~~ 214 (217)
T 2p28_B 213 QH 214 (217)
T ss_dssp CE
T ss_pred CC
Confidence 75
No 39
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.40 E-value=3.3e-07 Score=82.84 Aligned_cols=94 Identities=18% Similarity=0.329 Sum_probs=57.7
Q ss_pred CCCCCCCCC--------CCCCCeecCC--CCeeecCCCCCCCCCCCCCCCCCcCCcccccccccCCCCCccccccccccc
Q psy6207 624 GEDCSLDCG--------CNNGGTCNQL--DGGCNCGRGYQGKLCTAPCPEGQYGYNCKEECLTKGQDVPVRTAVSHALKV 693 (823)
Q Consensus 624 ~~~C~~~~~--------C~~~g~C~~~--~~~C~C~~Gy~G~~C~~~c~~g~~g~~C~~~c~c~~~~~~~~~~~~~~~~~ 693 (823)
+|+|+.+ + |.++|+|+++ .|+|.|++||+|..|++.... ++|... ..
T Consensus 6 ~d~C~~~-p~~~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~----~~C~~~------------------~~ 62 (114)
T 1aut_L 6 GDQCLVL-PLEHPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSF----LNCSLD------------------NG 62 (114)
T ss_dssp --CCCCC-SSCCSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCS----SSSSSG------------------GG
T ss_pred cccccCC-CccccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcC----CcCcCC------------------CC
Confidence 6778776 6 9999999986 569999999999998763100 112110 00
Q ss_pred ccccCceeeeeeeeceeeecccceeEeecccceeeecCCeeecccCccCCCCCCCCCCCCCCCCCCCCeecCC
Q psy6207 694 HMGINARRYVNVRMVATFNTTLYLYLFVNLTYGILYKTLVRLRECEERCPPGTHGPSCINRCRCQNGAICNPA 766 (823)
Q Consensus 694 ~c~~~g~~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~G~~g~~C~~~C~~g~~G~~C~~~C~C~~~g~C~~~ 766 (823)
.| .. +|+++.++|+ |+|++||+|......|.+ ..+-+|.++++|+..
T Consensus 63 ~C--~~----------~C~n~~g~y~-------C~C~~G~~~~~~g~~C~~-------~~~~pC~~~~~~i~~ 109 (114)
T 1aut_L 63 GC--TH----------YCLEEVGWRR-------CSCAPGYKLGDDLLQCHP-------AVKFPCGRPWKRMEK 109 (114)
T ss_dssp GC--SS----------EEEECSSSEE-------EECCTTEEECTTSSCEEE-------CSSSCTTCCC-----
T ss_pred CC--CC----------EeECCCCCEE-------eECCCCeeECCCCCccCc-------CcccCCCCCCccCCC
Confidence 11 12 7888888888 999999997644333321 123378888877764
No 40
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=98.33 E-value=2.2e-07 Score=84.06 Aligned_cols=83 Identities=19% Similarity=0.263 Sum_probs=54.5
Q ss_pred cccCceeeeeeeeceeeecccceeEeecccceeeecCCeeecccCccCCCCCCCCCCCCCCCCCCCC---eecCC--CCe
Q psy6207 695 MGINARRYVNVRMVATFNTTLYLYLFVNLTYGILYKTLVRLRECEERCPPGTHGPSCINRCRCQNGA---ICNPA--NGQ 769 (823)
Q Consensus 695 c~~~g~~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~G~~g~~C~~~C~~g~~G~~C~~~C~C~~~g---~C~~~--~~~ 769 (823)
|.++| +|+++.++|+ |.|++||+|..|++.-. .++|.-.+++ +|+++ +|+
T Consensus 22 C~~~g----------~C~~~~~~y~-------C~C~~G~~G~~C~~~~~--------~~~C~~~~~~C~~~C~n~~g~y~ 76 (114)
T 1aut_L 22 CCGHG----------TCIDGIGSFS-------CDCRSGWEGRFCQREVS--------FLNCSLDNGGCTHYCLEEVGWRR 76 (114)
T ss_dssp TTTSE----------EECCCSSCCC-------EEECTTEESTTSCEECC--------SSSSSSGGGGCSSEEEECSSSEE
T ss_pred CCCcC----------CCCCCCCCcE-------eeCCCCCcCCCcCcCCc--------CCcCcCCCCCCCCEeECCCCCEE
Confidence 77899 9999888888 99999999999986411 1233211222 89887 679
Q ss_pred eeCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCeeecc
Q psy6207 770 CLCAPGWMGSVCNVPCTPGMWGQGCTVPCECFNGASCHHV 809 (823)
Q Consensus 770 C~C~~G~~G~~C~~~C~~~~~g~~C~~~c~C~~~~~C~~~ 809 (823)
|+|++||+|....+.|.+ ..+.+|.++++++..
T Consensus 77 C~C~~G~~~~~~g~~C~~-------~~~~pC~~~~~~i~~ 109 (114)
T 1aut_L 77 CSCAPGYKLGDDLLQCHP-------AVKFPCGRPWKRMEK 109 (114)
T ss_dssp EECCTTEEECTTSSCEEE-------CSSSCTTCCC-----
T ss_pred eECCCCeeECCCCCccCc-------CcccCCCCCCccCCC
Confidence 999999997554443322 123378888877653
No 41
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.29 E-value=2.9e-07 Score=77.88 Aligned_cols=69 Identities=25% Similarity=0.611 Sum_probs=55.6
Q ss_pred CCCCCCCCCCCCCCcccCCCCccccccccccccccceeeccCCCCcc--CCCCCCCCCCCCCCCCCCCCcCCCCCCCCcc
Q psy6207 430 GDNCSQHCNCKNDALCFPRNGTNTYQYFFLQSLTLFTFLSLTHSGFS--GRHCEKPCPQGSYGQDCSQTCLCSKEGSASC 507 (823)
Q Consensus 430 ~~~C~~~~~C~~~g~C~~~~g~C~~~~~~~~~~~~~s~~C~C~~Gy~--G~~C~~~C~~g~~g~~C~~~c~C~~~g~g~C 507 (823)
+++|+...+|.+ ++|+++.+ +|+|.|++||+ |..|++ +++|....+|.+ ++|
T Consensus 5 ideC~~~~~C~~-g~C~n~~g---------------~y~C~C~~Gy~~~g~~C~d-------ideC~~~~~C~~---~~C 58 (82)
T 1emn_A 5 MDECKEPDVCKH-GQCINTDG---------------SYRCECPFGYILAGNECVD-------TDECSVGNPCGN---GTC 58 (82)
T ss_dssp CCSSSSTTSCSS-SEECCCSS---------------CCCEECCTTEEEETTEEEE-------CCGGGTCCTTSS---SCE
T ss_pred cccCCCCCCcCC-CEEEecCC---------------CEEEECCCCeECCCCccCC-------cccccCCCCCCC---CEe
Confidence 688876458875 79988776 89999999997 888876 588874447875 589
Q ss_pred cC--CCceeeCCCCCCCCC
Q psy6207 508 SP--GSGQCVCRPGGAGQL 524 (823)
Q Consensus 508 ~~--~~~~C~C~~G~~G~~ 524 (823)
++ ++|+|+|++||+|..
T Consensus 59 ~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 59 KNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp EECSSSEEECCSSSSCCCS
T ss_pred ECCCCCEEeECCCCeEeCC
Confidence 76 589999999999865
No 42
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.25 E-value=3.1e-07 Score=100.38 Aligned_cols=116 Identities=27% Similarity=0.664 Sum_probs=38.5
Q ss_pred CCCCCCCCCcccCCC--CcccCCCCccCCCCCccCCCCCCcCCCCCccccccCCCCCcccccCCCCCCCccc-----cCC
Q psy6207 72 YCSCPVESMECSRID--GNCSCPPGFRGAKCKERTCPDGLYGEGCDRTCECNVENTKLCVPVCTDECIRGTC-----IAP 144 (823)
Q Consensus 72 ~C~C~~~~~~C~~~~--~~C~C~~G~~G~~C~~~~C~~~~~g~~C~~~C~C~~~~~~~C~~~c~~~C~~G~C-----~~~ 144 (823)
.|.|++++..|.+.. ++|.|+++|+|..|+ +|.++|++..+. +|++ ...
T Consensus 296 ~C~CnGHas~C~~~~g~~~C~C~~~ttG~~CE--~C~pgy~~~P~~----------------------~gt~~p~~~g~~ 351 (426)
T 3zyj_B 296 RCKCNLHATVCVYDNSKLTCECEHNTTGPDCG--KCKKNYQGRPWS----------------------PGSYLPIPKGAA 351 (426)
T ss_dssp EECCSSSCSCEEEETTEEEECCCTTEESSSSC--EECTTCCSSCCC----------------------CCBCCSSSSCBC
T ss_pred cCcCCCchhhcCCCCCCceeeCCCCCcCCCcc--ccccccccCccc----------------------CCcccccCCCCC
Confidence 368999987898644 499999999999999 898888765432 1111 113
Q ss_pred ceee-ccCCCCCCccccCCCCCCCCCCCCCCCCCCCCCeecCCCCcccCCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCC
Q psy6207 145 NTCK-CEVGFGGPTCNIECPEGHYGPDCKLACQCENGAGCDPNTGACDCLDGYMGTHCEEVCGPGRFGQNCSQECQCRNG 223 (823)
Q Consensus 145 ~~C~-C~~Gy~G~~C~~~c~~g~~g~~C~~~c~C~~~g~C~~~~g~C~C~~Gy~G~~C~~~C~~g~~g~~C~~~~~C~~~ 223 (823)
+.|+ |+-++.|..|+..- -+|.++|+|.+.. +|+|++||+|..|+.- +|.++
T Consensus 352 ~~C~pC~Cn~~g~~CD~~t------------~~C~ngg~C~~~~-~C~C~~G~~G~~Ce~c--------------~C~~~ 404 (426)
T 3zyj_B 352 NACIPSISSIGTNVCDNEL------------LHCQNGGTCHNNV-RCLCPAAYTGILCEKL--------------RCEEA 404 (426)
T ss_dssp CCCCCCCC------------------------------------------------------------------------
T ss_pred CcccCCCCCCCcCccccCc------------ccCCCCCCcCCCC-CCcCCCCCcCCCCcCC--------------CCCCC
Confidence 4553 44455677776421 1789999998765 9999999999998862 68889
Q ss_pred CeecCCCCccccCCC
Q psy6207 224 AECHPATGECSCQPG 238 (823)
Q Consensus 224 g~C~~~~~~C~C~~G 238 (823)
|+|+..+++|.=+.|
T Consensus 405 g~C~~~~Gqc~~~~~ 419 (426)
T 3zyj_B 405 GSCGSDSGQGAPPHG 419 (426)
T ss_dssp ---------------
T ss_pred CcccCCCCccCCCCC
Confidence 999888887765444
No 43
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=98.25 E-value=6.4e-07 Score=75.74 Aligned_cols=69 Identities=20% Similarity=0.379 Sum_probs=51.1
Q ss_pred CCCCCCCCCCCCCCeecCC--CCeeecCCCCC--CCCCCCCCCCCCcCCcccccccccCCCCCcccccccccccccccCc
Q psy6207 624 GEDCSLDCGCNNGGTCNQL--DGGCNCGRGYQ--GKLCTAPCPEGQYGYNCKEECLTKGQDVPVRTAVSHALKVHMGINA 699 (823)
Q Consensus 624 ~~~C~~~~~C~~~g~C~~~--~~~C~C~~Gy~--G~~C~~~c~~g~~g~~C~~~c~c~~~~~~~~~~~~~~~~~~c~~~g 699 (823)
+++|+...+|.+ |+|+++ .|+|.|++||+ |..|++. ++|.. ..+|. ++
T Consensus 5 ideC~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~g~~C~di-------deC~~-------------------~~~C~-~~ 56 (82)
T 1emn_A 5 MDECKEPDVCKH-GQCINTDGSYRCECPFGYILAGNECVDT-------DECSV-------------------GNPCG-NG 56 (82)
T ss_dssp CCSSSSTTSCSS-SEECCCSSCCCEECCTTEEEETTEEEEC-------CGGGT-------------------CCTTS-SS
T ss_pred cccCCCCCCcCC-CEEEecCCCEEEECCCCeECCCCccCCc-------ccccC-------------------CCCCC-CC
Confidence 789986338985 899986 56999999998 6666432 12211 23454 47
Q ss_pred eeeeeeeeceeeecccceeEeecccceeeecCCeeecc
Q psy6207 700 RRYVNVRMVATFNTTLYLYLFVNLTYGILYKTLVRLRE 737 (823)
Q Consensus 700 ~~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~G~~g~~ 737 (823)
+|+++.|+|+ |.|++||+|..
T Consensus 57 ----------~C~n~~g~y~-------C~C~~G~~g~~ 77 (82)
T 1emn_A 57 ----------TCKNVIGGFE-------CTCEEGFEPGP 77 (82)
T ss_dssp ----------CEEECSSSEE-------ECCSSSSCCCS
T ss_pred ----------EeECCCCCEE-------eECCCCeEeCC
Confidence 9999999888 99999999874
No 44
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.17 E-value=1.4e-06 Score=82.28 Aligned_cols=69 Identities=26% Similarity=0.775 Sum_probs=54.0
Q ss_pred CCCCCCCCCCCCCCeeeCC--CcEEeCCCCCcCCCccccCcCCcCCCCCCCC-CCCCCCCCCee-ec--CCCeEecCCCC
Q psy6207 535 GQNCTQECRCMNGAACNPQ--DGTCLCPAGYYGPLCQKRCEFMTYGRNCAQA-CTCFTENSQGC-DI--VTGKCICRPGF 608 (823)
Q Consensus 535 ~~~C~~~c~C~~~g~C~~~--~~~C~C~~G~~G~~C~~~c~~~~~g~~C~~~-~~C~~~~~~~C-~~--~~~~C~C~~G~ 608 (823)
+++|..+ +|.++|+|++. +|+|.|++||+|..|+++ ++|... .+| .+ +| ++ ++|+|+|++||
T Consensus 48 ideC~~~-pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~-------deC~~~~~~C--~~--~C~~n~~g~y~C~C~~Gy 115 (146)
T 1x7a_L 48 GDQCEPN-PCLNGGLCKDDINSYECWCQVGFEGKNCELD-------ATCNIKNGRC--KQ--FCKTGADSKVLCSCTTGY 115 (146)
T ss_dssp --CCSSC-SSCTTCEEEECSSCEEEECCSSEESTTTCEE-------CCTTSGGGSC--SS--BCCCCSSSCCCCBCCTTE
T ss_pred cCcCCCC-CCCCCCEeECCCCCEEEecCCCCcCCcCCCC-------ccccCCCCCC--cC--CCCCCCCCCEEeEcCCCc
Confidence 5899887 99999999986 679999999999999865 456542 356 33 78 54 58999999999
Q ss_pred C----CCCccc
Q psy6207 609 K----GHRCET 615 (823)
Q Consensus 609 ~----G~~C~~ 615 (823)
+ |..|+.
T Consensus 116 ~l~~dG~~C~~ 126 (146)
T 1x7a_L 116 RLAPDQKSCKP 126 (146)
T ss_dssp EECTTSSSEEE
T ss_pred EeCCCCCcCCC
Confidence 9 777764
No 45
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.11 E-value=7.5e-07 Score=97.42 Aligned_cols=104 Identities=30% Similarity=0.667 Sum_probs=29.3
Q ss_pred CceeeccCCCCCCccccCCCCCCCCCCCCCCCCCCCCCee-c--CCCCccc-CCCCCcCCCCCCCCCCCCCCCCCCCCCC
Q psy6207 144 PNTCKCEVGFGGPTCNIECPEGHYGPDCKLACQCENGAGC-D--PNTGACD-CLDGYMGTHCEEVCGPGRFGQNCSQECQ 219 (823)
Q Consensus 144 ~~~C~C~~Gy~G~~C~~~c~~g~~g~~C~~~c~C~~~g~C-~--~~~g~C~-C~~Gy~G~~C~~~C~~g~~g~~C~~~~~ 219 (823)
.++|.|+.+|+|..|+ .|.++|++..+ ..+..+ . ...+.|+ |+-++.|..|+.. ..+
T Consensus 312 ~~~C~C~~~ttG~~CE-~C~pgy~~~P~------~~gt~~p~~~g~~~~C~pC~Cn~~g~~CD~~------------t~~ 372 (426)
T 3zyj_B 312 KLTCECEHNTTGPDCG-KCKKNYQGRPW------SPGSYLPIPKGAANACIPSISSIGTNVCDNE------------LLH 372 (426)
T ss_dssp EEEECCCTTEESSSSC-EECTTCCSSCC------CCCBCCSSSSCBCCCCCCCCC-------------------------
T ss_pred CceeeCCCCCcCCCcc-ccccccccCcc------cCCcccccCCCCCCcccCCCCCCCcCccccC------------ccc
Confidence 4799999999999999 59999988743 332211 1 1234563 4445567777642 127
Q ss_pred CCCCCeecCCCCccccCCCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCeecCCCCeeeCCCC
Q psy6207 220 CRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGPSCINRCRCQNGAICNPANGQCLCAPG 281 (823)
Q Consensus 220 C~~~g~C~~~~~~C~C~~G~~G~~C~~~C~~g~~g~~C~~~c~C~~~g~C~~~~g~C~C~~G 281 (823)
|.++|+|.+.. +|+|++||+|..|+.. +|.++|+|+..+|+|.=+.|
T Consensus 373 C~ngg~C~~~~-~C~C~~G~~G~~Ce~c--------------~C~~~g~C~~~~Gqc~~~~~ 419 (426)
T 3zyj_B 373 CQNGGTCHNNV-RCLCPAAYTGILCEKL--------------RCEEAGSCGSDSGQGAPPHG 419 (426)
T ss_dssp --------------------------------------------------------------
T ss_pred CCCCCCcCCCC-CCcCCCCCcCCCCcCC--------------CCCCCCcccCCCCccCCCCC
Confidence 99999998755 9999999999998842 78889999888888765443
No 46
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.07 E-value=1.7e-06 Score=81.40 Aligned_cols=73 Identities=19% Similarity=0.376 Sum_probs=55.6
Q ss_pred cccccccccccCceeeeeeeeceeeecccceeEeecccceeeecCCeeecccCccCCCCCCCCCCCCCCCCCCCC---ee
Q psy6207 687 VSHALKVHMGINARRYVNVRMVATFNTTLYLYLFVNLTYGILYKTLVRLRECEERCPPGTHGPSCINRCRCQNGA---IC 763 (823)
Q Consensus 687 ~~~~~~~~c~~~g~~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~G~~g~~C~~~C~~g~~G~~C~~~C~C~~~g---~C 763 (823)
++.+...+|.++| +|+++.++|+ |.|++||+|..|++.. ..| ..|++.+++ +|
T Consensus 47 id~C~~~pC~n~g----------~C~~~~g~y~-------C~C~~G~~G~~C~~~~------~~c-~~c~~~~~~C~~~C 102 (142)
T 2c4f_L 47 GDQCASSPCQNGG----------SCKDQLQSYI-------CFCLPAFEGRNCETHK------DDQ-LICVNENGGCEQYC 102 (142)
T ss_dssp CCGGGGCCCCTTC----------EEEEETTEEE-------EECCTTEESTTSCEEG------GGC-CSTTTGGGGCSSEE
T ss_pred cCcCcCCCcCCCC----------EEeCCCCCEE-------eeCCCCccCCccccCc------ccc-ccccCCCCCccCEe
Confidence 4455567898999 9999999888 9999999999998631 001 124566666 89
Q ss_pred cCC---CCeeeCCCCCC----CCCCCC
Q psy6207 764 NPA---NGQCLCAPGWM----GSVCNV 783 (823)
Q Consensus 764 ~~~---~~~C~C~~G~~----G~~C~~ 783 (823)
+++ +|+|.|++||+ |..|++
T Consensus 103 ~~~~g~~y~C~C~~Gy~l~~dG~~C~~ 129 (142)
T 2c4f_L 103 SDHTGTKRSCRCHEGYSLLADGVSCTP 129 (142)
T ss_dssp ECCTTSCCEEECCTTEEECTTSSCEEE
T ss_pred ECCCCCCEEEECCCCceECCCCCCCCC
Confidence 875 67999999999 777764
No 47
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=98.07 E-value=2.2e-06 Score=81.00 Aligned_cols=69 Identities=17% Similarity=0.342 Sum_probs=53.6
Q ss_pred cccccccccCceeeeeeeeceeeecccceeEeecccceeeecCCeeecccCccCCCCCCCCCCCC-CCCCCCCCee-cCC
Q psy6207 689 HALKVHMGINARRYVNVRMVATFNTTLYLYLFVNLTYGILYKTLVRLRECEERCPPGTHGPSCIN-RCRCQNGAIC-NPA 766 (823)
Q Consensus 689 ~~~~~~c~~~g~~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~G~~g~~C~~~C~~g~~G~~C~~-~C~C~~~g~C-~~~ 766 (823)
.+...+|.++| +|+++.++|+ |.|++||+|..|+++ +.|.. ..+|.+ +| +++
T Consensus 50 eC~~~pC~n~g----------~C~~~~~~y~-------C~C~~G~~G~~C~~~-------deC~~~~~~C~~--~C~~n~ 103 (146)
T 1x7a_L 50 QCEPNPCLNGG----------LCKDDINSYE-------CWCQVGFEGKNCELD-------ATCNIKNGRCKQ--FCKTGA 103 (146)
T ss_dssp CCSSCSSCTTC----------EEEECSSCEE-------EECCSSEESTTTCEE-------CCTTSGGGSCSS--BCCCCS
T ss_pred cCCCCCCCCCC----------EeECCCCCEE-------EecCCCCcCCcCCCC-------ccccCCCCCCcC--CCCCCC
Confidence 33456788999 9999998888 999999999999875 33442 234665 89 765
Q ss_pred --CCeeeCCCCCC----CCCCCC
Q psy6207 767 --NGQCLCAPGWM----GSVCNV 783 (823)
Q Consensus 767 --~~~C~C~~G~~----G~~C~~ 783 (823)
+|+|.|++||+ |..|++
T Consensus 104 ~g~y~C~C~~Gy~l~~dG~~C~~ 126 (146)
T 1x7a_L 104 DSKVLCSCTTGYRLAPDQKSCKP 126 (146)
T ss_dssp SSCCCCBCCTTEEECTTSSSEEE
T ss_pred CCCEEeEcCCCcEeCCCCCcCCC
Confidence 68999999999 777765
No 48
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=98.04 E-value=2.4e-06 Score=84.20 Aligned_cols=75 Identities=19% Similarity=0.382 Sum_probs=23.6
Q ss_pred CCCCCCCCCCCCCCeecCC--CCeeecCCCCCCCCCCCCCCCCCcCCcccccccccCCCCCcccccccccccccccCcee
Q psy6207 624 GEDCSLDCGCNNGGTCNQL--DGGCNCGRGYQGKLCTAPCPEGQYGYNCKEECLTKGQDVPVRTAVSHALKVHMGINARR 701 (823)
Q Consensus 624 ~~~C~~~~~C~~~g~C~~~--~~~C~C~~Gy~G~~C~~~c~~g~~g~~C~~~c~c~~~~~~~~~~~~~~~~~~c~~~g~~ 701 (823)
+++|+.+ +|.++|+|++. .|+|.|++||+|..|++... +.|... ..+|. .
T Consensus 42 ideC~~~-pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~-----deC~~~------------------~~~C~--~-- 93 (195)
T 1nfu_B 42 GDQCETS-PCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTR-----KLCSLD------------------NGDCD--Q-- 93 (195)
T ss_dssp ----------------------------------------C-----CGGGTG------------------GGGCS--S--
T ss_pred CcccCCC-CCCCCCEeECCCCCeeEeCCCCceecccccccc-----ccccCC------------------CCCCC--C--
Confidence 7899977 99999999986 56999999999999986310 122211 11222 2
Q ss_pred eeeeeeceeeecccceeEeecccceeeecCCee----ecccCcc
Q psy6207 702 YVNVRMVATFNTTLYLYLFVNLTYGILYKTLVR----LRECEER 741 (823)
Q Consensus 702 ~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~G~~----g~~C~~~ 741 (823)
+|+++.|+|. |.|++||+ |..|+..
T Consensus 94 --------~C~n~~gsy~-------C~C~~Gy~l~~dG~~C~~~ 122 (195)
T 1nfu_B 94 --------FCHEEQNSVV-------CSCARGYTLADNGKACIPT 122 (195)
T ss_dssp --------EEEEETTEEE-------EECCTTEEECTTSSCEEES
T ss_pred --------EeECCCCCeE-------EECCCCceeCCCCCccccC
Confidence 7888888888 99999999 7777754
No 49
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.02 E-value=7.3e-07 Score=100.74 Aligned_cols=77 Identities=29% Similarity=0.761 Sum_probs=36.5
Q ss_pred ccCCCCccCCCCCccCCCCCCcCCCCCccccccCCCCCcccccCCCCCCCccccCCceeeccCCCCCCccccCCCCCCCC
Q psy6207 89 CSCPPGFRGAKCKERTCPDGLYGEGCDRTCECNVENTKLCVPVCTDECIRGTCIAPNTCKCEVGFGGPTCNIECPEGHYG 168 (823)
Q Consensus 89 C~C~~G~~G~~C~~~~C~~~~~g~~C~~~C~C~~~~~~~C~~~c~~~C~~G~C~~~~~C~C~~Gy~G~~C~~~c~~g~~g 168 (823)
.+|..+|.|..|+. ++|. .+|.||+|+..++|.|++||+|..|++
T Consensus 379 ~~C~~~~~g~~c~~-----------------------~~C~----~~C~nG~C~~~~~C~C~~G~~G~~C~~-------- 423 (463)
T 2wg3_C 379 EECRATVQPAQTLT-----------------------SECS----RLCRNGYCTPTGKCCCSPGWEGDFCRT-------- 423 (463)
T ss_dssp GGGCCCCCCCCCCC-----------------------CHHH----HHCCSEEECTTSCEEECTTEESTTSCE--------
T ss_pred ccCCCCCcCCCCcc-----------------------cccc----CCCCCCccCCCCeECCCCCcCCCcCCc--------
Confidence 56777888877762 2343 247789999889999999999999974
Q ss_pred CCCCCCCCCCCCCeecCCCCcccCCCCCcCCCCCC
Q psy6207 169 PDCKLACQCENGAGCDPNTGACDCLDGYMGTHCEE 203 (823)
Q Consensus 169 ~~C~~~c~C~~~g~C~~~~g~C~C~~Gy~G~~C~~ 203 (823)
+.|.. +|+++|+|++. ++|.|++||+|..|+.
T Consensus 424 ~~C~~--~C~~~g~C~~~-~~C~C~~G~~G~~C~~ 455 (463)
T 2wg3_C 424 AKCEP--ACRHGGVCVRP-NKCLCKKGYLGPQCEQ 455 (463)
T ss_dssp ECC--------------------------------
T ss_pred CcCCC--CCCCCCEECCC-CEEECCCCcccCCCCC
Confidence 24544 79999999854 7999999999999986
No 50
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=98.00 E-value=2.8e-06 Score=79.85 Aligned_cols=72 Identities=28% Similarity=0.694 Sum_probs=53.7
Q ss_pred CCCCCCCCCCCCCCeeeCC--CcEEeCCCCCcCCCccccCcCCcCCCCCCCCCCCCCCCCC---eeec--C-CCeEecCC
Q psy6207 535 GQNCTQECRCMNGAACNPQ--DGTCLCPAGYYGPLCQKRCEFMTYGRNCAQACTCFTENSQ---GCDI--V-TGKCICRP 606 (823)
Q Consensus 535 ~~~C~~~c~C~~~g~C~~~--~~~C~C~~G~~G~~C~~~c~~~~~g~~C~~~~~C~~~~~~---~C~~--~-~~~C~C~~ 606 (823)
+++|..+ +|.++|+|+++ +|+|.|++||+|..|++.... |.. .++ .+++ +|++ + +|+|+|++
T Consensus 47 id~C~~~-pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~~~------c~~-c~~--~~~~C~~~C~~~~g~~y~C~C~~ 116 (142)
T 2c4f_L 47 GDQCASS-PCQNGGSCKDQLQSYICFCLPAFEGRNCETHKDD------QLI-CVN--ENGGCEQYCSDHTGTKRSCRCHE 116 (142)
T ss_dssp CCGGGGC-CCCTTCEEEEETTEEEEECCTTEESTTSCEEGGG------CCS-TTT--GGGGCSSEEECCTTSCCEEECCT
T ss_pred cCcCcCC-CcCCCCEEeCCCCCEEeeCCCCccCCccccCccc------ccc-ccC--CCCCccCEeECCCCCCEEEECCC
Confidence 5889887 99999999986 569999999999999864322 211 123 3333 7864 5 89999999
Q ss_pred CCC----CCCcccc
Q psy6207 607 GFK----GHRCETQ 616 (823)
Q Consensus 607 G~~----G~~C~~~ 616 (823)
||+ |..|+..
T Consensus 117 Gy~l~~dG~~C~~~ 130 (142)
T 2c4f_L 117 GYSLLADGVSCTPT 130 (142)
T ss_dssp TEEECTTSSCEEES
T ss_pred CceECCCCCCCCCC
Confidence 999 7777653
No 51
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.99 E-value=2.6e-06 Score=65.42 Aligned_cols=45 Identities=24% Similarity=0.475 Sum_probs=34.9
Q ss_pred CCCCCCCCCCCccCCCCCCCCCCCCCCeee-----CC--CcEEeCCCCCcCCCccccCc
Q psy6207 522 GQLCDRPCSEGRYGQNCTQECRCMNGAACN-----PQ--DGTCLCPAGYYGPLCQKRCE 573 (823)
Q Consensus 522 G~~C~~~c~~g~~~~~C~~~c~C~~~g~C~-----~~--~~~C~C~~G~~G~~C~~~c~ 573 (823)
|.+|+.+ +++|+++ ||+|+|+|. +. .|+|.|++||+|.+||..+.
T Consensus 1 G~~c~~~------~~eC~s~-pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~ 52 (55)
T 3u7u_G 1 GTSHLVK------CAEKEKT-FCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVM 52 (55)
T ss_dssp --CCEEE------CCSTTTT-TSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECC
T ss_pred CCCCccc------CCCCcCC-CCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCc
Confidence 4566665 5899988 999999994 32 57999999999999997643
No 52
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.97 E-value=2.7e-06 Score=79.14 Aligned_cols=75 Identities=19% Similarity=0.382 Sum_probs=22.8
Q ss_pred CCCCCCCCCCCCCCeecCC--CCeeecCCCCCCCCCCCCCCCCCcCCcccccccccCCCCCcccccccccccccccCcee
Q psy6207 624 GEDCSLDCGCNNGGTCNQL--DGGCNCGRGYQGKLCTAPCPEGQYGYNCKEECLTKGQDVPVRTAVSHALKVHMGINARR 701 (823)
Q Consensus 624 ~~~C~~~~~C~~~g~C~~~--~~~C~C~~Gy~G~~C~~~c~~g~~g~~C~~~c~c~~~~~~~~~~~~~~~~~~c~~~g~~ 701 (823)
+++|+.+ +|.++|+|+++ .|+|.|++||+|..|++... +.|... ..+|. .
T Consensus 42 ~d~C~~~-pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~-----d~C~~~------------------~~~C~--~-- 93 (134)
T 2vh0_B 42 GDQCETS-PCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTR-----KLCSLD------------------NGDCD--Q-- 93 (134)
T ss_dssp ----------------------------------------C-----CGGGTG------------------GGGCS--S--
T ss_pred cCcCCCC-CCCCcCCcccCCCCEEeeCCCCccCCccccCCC-----CccccC------------------CCCCC--C--
Confidence 6899877 99999999986 56999999999998876310 112210 01121 2
Q ss_pred eeeeeeceeeecccceeEeecccceeeecCCee----ecccCcc
Q psy6207 702 YVNVRMVATFNTTLYLYLFVNLTYGILYKTLVR----LRECEER 741 (823)
Q Consensus 702 ~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~G~~----g~~C~~~ 741 (823)
+|+++.++|. |.|++||+ |..|++.
T Consensus 94 --------~C~~~~g~y~-------C~C~~Gy~l~~~g~~C~~~ 122 (134)
T 2vh0_B 94 --------FCHEEQNSVV-------CSCARGYTLADNGKACIPT 122 (134)
T ss_dssp --------EEEEETTEEE-------EECCTTEEECTTSSCEEES
T ss_pred --------EeECCCCCEE-------EECCCCcEECCCCCccCcC
Confidence 7888888888 99999999 7777653
No 53
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.97 E-value=2.8e-06 Score=65.26 Aligned_cols=43 Identities=23% Similarity=0.444 Sum_probs=33.9
Q ss_pred CCCccccCCCCCccCCCCCCCCCCCCCCeec-----CC--CCeeecCCCCCCCCCCCC
Q psy6207 610 GHRCETQCSNPNTYGEDCSLDCGCNNGGTCN-----QL--DGGCNCGRGYQGKLCTAP 660 (823)
Q Consensus 610 G~~C~~~c~~~~~~~~~C~~~~~C~~~g~C~-----~~--~~~C~C~~Gy~G~~C~~~ 660 (823)
|..|++. ++||+++ ||.|+|+|. +. .|+|+|++||+|.+||..
T Consensus 1 G~~c~~~-------~~eC~s~-pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~ 50 (55)
T 3u7u_G 1 GTSHLVK-------CAEKEKT-FCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNY 50 (55)
T ss_dssp --CCEEE-------CCSTTTT-TSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEE
T ss_pred CCCCccc-------CCCCcCC-CCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCcc
Confidence 4566666 6899988 999999994 32 569999999999999875
No 54
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.91 E-value=6.6e-06 Score=70.28 Aligned_cols=53 Identities=19% Similarity=0.343 Sum_probs=41.7
Q ss_pred eeecccceeEeecccceeeecCCee----ecccCccCCCCCCCCCCCCCC---CCCCCCeecCC--CCeeeCCCCCCCCC
Q psy6207 710 TFNTTLYLYLFVNLTYGILYKTLVR----LRECEERCPPGTHGPSCINRC---RCQNGAICNPA--NGQCLCAPGWMGSV 780 (823)
Q Consensus 710 ~C~~~~g~~~~~~~~~~C~C~~G~~----g~~C~~~C~~g~~G~~C~~~C---~C~~~g~C~~~--~~~C~C~~G~~G~~ 780 (823)
+|+++.++|+ |.|++||+ |..|+++ ++| +|+ ++|+++ +|+|+|+ ||.|..
T Consensus 17 ~C~n~~g~y~-------C~C~~G~~~~~~g~~C~di-----------deC~~~~C~--~~C~n~~g~y~C~C~-g~~G~~ 75 (87)
T 1z6c_A 17 VCKNIPGDFE-------CECPEGYRYNLKSKSCEDI-----------DECSENMCA--QLCVNYPGGYTCYCD-GKKGFK 75 (87)
T ss_dssp SCCCBTTBCC-------CSSSTTCEEETTTTEEECC-----------CHHHHSCCS--SEECCCSSSCCEECC-SSSCCB
T ss_pred EeECCCCCEE-------EECCCCceECCCCCcCCCc-----------CeeCCCCCC--CEEEccCCCEEEECC-CCcCCc
Confidence 9999998888 99999999 5566542 444 576 699987 6899998 888776
Q ss_pred CCC
Q psy6207 781 CNV 783 (823)
Q Consensus 781 C~~ 783 (823)
++.
T Consensus 76 ~~~ 78 (87)
T 1z6c_A 76 LAQ 78 (87)
T ss_dssp CCT
T ss_pred ccC
Confidence 654
No 55
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.90 E-value=6.7e-06 Score=70.09 Aligned_cols=56 Identities=20% Similarity=0.414 Sum_probs=41.2
Q ss_pred eeecccceeEeecccceeeecCCee-----ecccCccCCCCCCCCCCC-CCCCCCCCCeecCC--CCeeeCCCCCCCCC
Q psy6207 710 TFNTTLYLYLFVNLTYGILYKTLVR-----LRECEERCPPGTHGPSCI-NRCRCQNGAICNPA--NGQCLCAPGWMGSV 780 (823)
Q Consensus 710 ~C~~~~g~~~~~~~~~~C~C~~G~~-----g~~C~~~C~~g~~G~~C~-~~C~C~~~g~C~~~--~~~C~C~~G~~G~~ 780 (823)
+|+++.++|+ |.|++||+ |..|+++ ++|. +...|. +++|+++ +|+|+|++||+|..
T Consensus 17 ~C~n~~g~y~-------C~C~~Gy~~~~~~g~~C~di-------deC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~~ 80 (86)
T 1lmj_A 17 QCVNTPGDFE-------CKCDEGYESGFMMMKNCMDI-------DECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLSP 80 (86)
T ss_dssp CEEEETTEEE-------ECCCSSEEECTTTSSSEEEC-------CHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCCS
T ss_pred EEECCCCCEE-------eeCCCCcCccCCCCCccCCc-------ccccCCCCcCC-CCEeEcCCCCEEEECcCCcccCC
Confidence 8999999888 99999999 4555532 1121 112376 5799987 57999999999863
No 56
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.87 E-value=2.2e-06 Score=84.48 Aligned_cols=71 Identities=18% Similarity=0.299 Sum_probs=23.4
Q ss_pred ccccccccCceeeeeeeeceeeecccceeEeecccceeeecCCeeecccCccCCCCCCCCCCCC-CCCCCCCCeecCC--
Q psy6207 690 ALKVHMGINARRYVNVRMVATFNTTLYLYLFVNLTYGILYKTLVRLRECEERCPPGTHGPSCIN-RCRCQNGAICNPA-- 766 (823)
Q Consensus 690 ~~~~~c~~~g~~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~G~~g~~C~~~C~~g~~G~~C~~-~C~C~~~g~C~~~-- 766 (823)
+...+|.++| +|+++.++|. |.|++||+|..|++.. -+.|.. ..+|.+ +|++.
T Consensus 45 C~~~pC~ngg----------~C~n~~g~y~-------C~C~~Gf~G~~Ce~~i-----~deC~~~~~~C~~--~C~n~~g 100 (195)
T 1nfu_B 45 CETSPCQNQG----------KCKDGLGEYT-------CTCLEGFEGKNCELFT-----RKLCSLDNGDCDQ--FCHEEQN 100 (195)
T ss_dssp ----------------------------------------------------------CCGGGTGGGGCSS--EEEEETT
T ss_pred cCCCCCCCCC----------EeECCCCCee-------EeCCCCceeccccccc-----cccccCCCCCCCC--EeECCCC
Confidence 3356788999 9999988888 9999999999998631 011321 224765 89876
Q ss_pred CCeeeCCCCCC----CCCCCCC
Q psy6207 767 NGQCLCAPGWM----GSVCNVP 784 (823)
Q Consensus 767 ~~~C~C~~G~~----G~~C~~~ 784 (823)
+|+|.|++||+ |..|+..
T Consensus 101 sy~C~C~~Gy~l~~dG~~C~~~ 122 (195)
T 1nfu_B 101 SVVCSCARGYTLADNGKACIPT 122 (195)
T ss_dssp EEEEECCTTEEECTTSSCEEES
T ss_pred CeEEECCCCceeCCCCCccccC
Confidence 57999999999 8888753
No 57
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.84 E-value=1e-05 Score=97.32 Aligned_cols=158 Identities=20% Similarity=0.404 Sum_probs=59.8
Q ss_pred CcccCCCcee----eCCCCCCCCCCCCCCCCCccCCCCCC--CCCCCCCCeeeCCCcEE----eCCCCCcCCCccccCcC
Q psy6207 505 ASCSPGSGQC----VCRPGGAGQLCDRPCSEGRYGQNCTQ--ECRCMNGAACNPQDGTC----LCPAGYYGPLCQKRCEF 574 (823)
Q Consensus 505 g~C~~~~~~C----~C~~G~~G~~C~~~c~~g~~~~~C~~--~c~C~~~g~C~~~~~~C----~C~~G~~G~~C~~~c~~ 574 (823)
+.|++.+++| .|..|.....|.. ..|.. . .|.+ +.|++....| .|..|+.+..|...
T Consensus 204 g~Ci~~~~~CDg~~dC~dgsDE~~C~~--------~~C~~~~f-~C~~-g~Ci~~~~~Cdg~~dC~dgsDE~~C~~~--- 270 (791)
T 3m0c_C 204 GECIHSSWRCDGGPDCKDKSDEENCAV--------ATCRPDEF-QCSD-GNCIHGSRQCDREYDCKDMSDEVGCVNV--- 270 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceeccccccCCCCCCCCCCCCCCccc--------cccCCCcc-eecC-CceEecceecCChhccccccccCccccc---
Confidence 6777777777 5777766666642 12321 2 4644 4787765556 68888888777632
Q ss_pred CcCCCCCC--CCCCCCCCCCCeeecC----CCeEecCCCCCCCCccccCCCCCccCCCCCCC-CCCCCCCeecCC--CCe
Q psy6207 575 MTYGRNCA--QACTCFTENSQGCDIV----TGKCICRPGFKGHRCETQCSNPNTYGEDCSLD-CGCNNGGTCNQL--DGG 645 (823)
Q Consensus 575 ~~~g~~C~--~~~~C~~~~~~~C~~~----~~~C~C~~G~~G~~C~~~c~~~~~~~~~C~~~-~~C~~~g~C~~~--~~~ 645 (823)
..|. ...+| .+ +.|++. .+.+.|+.|+..... .|. .++|... ..|. .+|+++ .|+
T Consensus 271 ----~~C~~~~~~~C--~~-G~Ci~~~~~Cd~~~dC~dgsDe~~~--~C~-----~~~C~~~~~~C~--~~C~~~~~~y~ 334 (791)
T 3m0c_C 271 ----TLCEGPNKFKC--HS-GECITLDKVCNMARDCRDWSDEPIK--ECG-----TNECLDNNGGCS--HVCNDLKIGYE 334 (791)
T ss_dssp ------CCSTTCCCC--TT-SCCCCSSCCSCSSCCSSSSCSCCCT--TBS-----CCSTTTGGGGCS--SEEEECSBSEE
T ss_pred ----ccccCCCcccc--CC-CcccccccccCCccccccccCcccc--ccc-----cccccccccCcc--ccccCCCCCcc
Confidence 1232 12356 33 567654 345678888766431 121 3556542 1233 388876 569
Q ss_pred eecCCCCC---CCCCCCCCCCCCcCCcccccccccCCCCCcccccccccccccccCceeeeeeeeceeeecccceeEeec
Q psy6207 646 CNCGRGYQ---GKLCTAPCPEGQYGYNCKEECLTKGQDVPVRTAVSHALKVHMGINARRYVNVRMVATFNTTLYLYLFVN 722 (823)
Q Consensus 646 C~C~~Gy~---G~~C~~~c~~g~~g~~C~~~c~c~~~~~~~~~~~~~~~~~~c~~~g~~~~~~~~~~~C~~~~g~~~~~~ 722 (823)
|.|++||. |..|++. ++|... .+| .. +|+|+.|+|+
T Consensus 335 C~C~~Gy~l~~g~~C~di-------deC~~~-------------------~~C--~~----------~C~n~~gsy~--- 373 (791)
T 3m0c_C 335 CLCPDGFQLVAQRRCEDI-------DECQDP-------------------DTC--SQ----------LCVNLEGGYK--- 373 (791)
T ss_dssp EECCTTCEEETTTEEECC-------CCCSSS-------------------SSC--TT----------TCCBCSSCBC---
T ss_pred cCCCCCCccCCCCccccC-------cccCCC-------------------CCC--CC----------eeecCCCCce---
Confidence 99999996 6666542 222211 112 23 8999999888
Q ss_pred ccceeeecCCeeec
Q psy6207 723 LTYGILYKTLVRLR 736 (823)
Q Consensus 723 ~~~~C~C~~G~~g~ 736 (823)
|.|++||++.
T Consensus 374 ----C~C~~Gy~l~ 383 (791)
T 3m0c_C 374 ----CQCEEGFQLD 383 (791)
T ss_dssp ----CCCCSSEECC
T ss_pred ----eecCCCCEeC
Confidence 9999999875
No 58
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.83 E-value=1.1e-05 Score=97.05 Aligned_cols=159 Identities=19% Similarity=0.445 Sum_probs=65.5
Q ss_pred CeeecCCceE----ECCCCccCCCCCCccCCCCCCCCCCCCCCCCCCCCCCcccCCCcce----EcCCCcccCCCCCCCC
Q psy6207 354 MECSRIDGNC----SCPPGFRGAKCKERTCPDGLYGEGCDRTCECNVENTKLCHAVTGKC----ECGPGWDGLTCDRPCP 425 (823)
Q Consensus 354 g~C~~~~~~C----~C~~G~~G~~C~~~~C~~g~~g~~C~~~~~C~~~~~~~C~~~~~~C----~C~~G~~G~~C~~~C~ 425 (823)
+.|++..++| .|..+.....|....|.+.. . .|.+ +.|.+....| .|..|+.+..|...
T Consensus 204 g~Ci~~~~~CDg~~dC~dgsDE~~C~~~~C~~~~--f------~C~~---g~Ci~~~~~Cdg~~dC~dgsDE~~C~~~-- 270 (791)
T 3m0c_C 204 GECIHSSWRCDGGPDCKDKSDEENCAVATCRPDE--F------QCSD---GNCIHGSRQCDREYDCKDMSDEVGCVNV-- 270 (791)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceeccccccCCCCCCCCCCCCCCccccccCCCc--c------eecC---CceEecceecCChhccccccccCccccc--
Confidence 3676666666 56666666666544444321 1 3433 3666555566 58888888777642
Q ss_pred CCccCCCCCC--CCCCCCCCcccCCCCccccccccccccccceeeccCCCCccCCC--CCCCCCCCCCCCCCCCC-cCCC
Q psy6207 426 ITRWGDNCSQ--HCNCKNDALCFPRNGTNTYQYFFLQSLTLFTFLSLTHSGFSGRH--CEKPCPQGSYGQDCSQT-CLCS 500 (823)
Q Consensus 426 ~~~~~~~C~~--~~~C~~~g~C~~~~g~C~~~~~~~~~~~~~s~~C~C~~Gy~G~~--C~~~C~~g~~g~~C~~~-c~C~ 500 (823)
.+|.. ...|.+ |.|++....| ...+.|+.|+.... |. .++|... ..|
T Consensus 271 -----~~C~~~~~~~C~~-G~Ci~~~~~C-------------d~~~dC~dgsDe~~~~C~--------~~~C~~~~~~C- 322 (791)
T 3m0c_C 271 -----TLCEGPNKFKCHS-GECITLDKVC-------------NMARDCRDWSDEPIKECG--------TNECLDNNGGC- 322 (791)
T ss_dssp -------CCSTTCCCCTT-SCCCCSSCCS-------------CSSCCSSSSCSCCCTTBS--------CCSTTTGGGGC-
T ss_pred -----ccccCCCccccCC-Cccccccccc-------------CCccccccccCccccccc--------cccccccccCc-
Confidence 44432 236765 5888776666 56668888876542 32 1344322 112
Q ss_pred CCCCCcccC--CCceeeCCCCCC---CCCCCCCCCCCccCCCCCCCCCCCCCCeeeCC--CcEEeCCCCCcC
Q psy6207 501 KEGSASCSP--GSGQCVCRPGGA---GQLCDRPCSEGRYGQNCTQECRCMNGAACNPQ--DGTCLCPAGYYG 565 (823)
Q Consensus 501 ~~g~g~C~~--~~~~C~C~~G~~---G~~C~~~c~~g~~~~~C~~~c~C~~~g~C~~~--~~~C~C~~G~~G 565 (823)
...|++ ++|+|.|++||. |..|++ ++||....+|. .+|+++ +|+|.|++||..
T Consensus 323 ---~~~C~~~~~~y~C~C~~Gy~l~~g~~C~d-------ideC~~~~~C~--~~C~n~~gsy~C~C~~Gy~l 382 (791)
T 3m0c_C 323 ---SHVCNDLKIGYECLCPDGFQLVAQRRCED-------IDECQDPDTCS--QLCVNLEGGYKCQCEEGFQL 382 (791)
T ss_dssp ---SSEEEECSBSEEEECCTTCEEETTTEEEC-------CCCCSSSSSCT--TTCCBCSSCBCCCCCSSEEC
T ss_pred ---cccccCCCCCcccCCCCCCccCCCCcccc-------CcccCCCCCCC--CeeecCCCCceeecCCCCEe
Confidence 236665 589999999995 888876 68998543664 489887 679999999975
No 59
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=97.82 E-value=6.2e-06 Score=70.49 Aligned_cols=67 Identities=27% Similarity=0.645 Sum_probs=51.8
Q ss_pred CCCCCCC-cCCCCCCCCcccC--CCceeeCCCCCC----CCCCCCCCCCCccCCCCCCCCCCCCCCeeeCC--CcEEeCC
Q psy6207 490 GQDCSQT-CLCSKEGSASCSP--GSGQCVCRPGGA----GQLCDRPCSEGRYGQNCTQECRCMNGAACNPQ--DGTCLCP 560 (823)
Q Consensus 490 g~~C~~~-c~C~~~g~g~C~~--~~~~C~C~~G~~----G~~C~~~c~~g~~~~~C~~~c~C~~~g~C~~~--~~~C~C~ 560 (823)
+++|... .+| + +++|++ ++|+|+|++||+ |..|++ +++|... +|+ ++|+++ +|+|.|+
T Consensus 3 ideC~~~~~~C-~--~~~C~n~~g~y~C~C~~G~~~~~~g~~C~d-------ideC~~~-~C~--~~C~n~~g~y~C~C~ 69 (87)
T 1z6c_A 3 VDECSLKPSIC-G--TAVCKNIPGDFECECPEGYRYNLKSKSCED-------IDECSEN-MCA--QLCVNYPGGYTCYCD 69 (87)
T ss_dssp SCSSSSSSSSB-T--TSSCCCBTTBCCCSSSTTCEEETTTTEEEC-------CCHHHHS-CCS--SEECCCSSSCCEECC
T ss_pred cccccCCCCCC-C--CCEeECCCCCEEEECCCCceECCCCCcCCC-------cCeeCCC-CCC--CEEEccCCCEEEECC
Confidence 4677654 127 6 788976 589999999999 778865 6899877 897 699987 6799998
Q ss_pred CCCcCCCccc
Q psy6207 561 AGYYGPLCQK 570 (823)
Q Consensus 561 ~G~~G~~C~~ 570 (823)
||.|..++.
T Consensus 70 -g~~G~~~~~ 78 (87)
T 1z6c_A 70 -GKKGFKLAQ 78 (87)
T ss_dssp -SSSCCBCCT
T ss_pred -CCcCCcccC
Confidence 777766653
No 60
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.81 E-value=6.7e-06 Score=73.15 Aligned_cols=76 Identities=26% Similarity=0.497 Sum_probs=31.9
Q ss_pred CCCCCCCCCCCCCCCCccCCCCCCC-CCCCCCCeeeCC--CcEEeCCCCCcC---CCccccCcCCcCCCCCCCCCCCCCC
Q psy6207 517 RPGGAGQLCDRPCSEGRYGQNCTQE-CRCMNGAACNPQ--DGTCLCPAGYYG---PLCQKRCEFMTYGRNCAQACTCFTE 590 (823)
Q Consensus 517 ~~G~~G~~C~~~c~~g~~~~~C~~~-c~C~~~g~C~~~--~~~C~C~~G~~G---~~C~~~c~~~~~g~~C~~~~~C~~~ 590 (823)
..+|+|..|+. ++|... ..|. ++|+++ +|+|.|++||+| ..|+++ ++|....+| .
T Consensus 19 ~~~~~~~~Cd~--------neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~di-------deC~~~~~C--~ 79 (107)
T 2w2n_E 19 ENLYFQGAMGT--------NECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCEDI-------DECQDPDTC--S 79 (107)
T ss_dssp -CCCCSCCBSC--------CGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEEC--------------------
T ss_pred CCCcCCCCCcC--------ccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCccccc-------cccCCCCCc--C
Confidence 45788888854 677642 1454 489986 679999999998 678743 567654567 3
Q ss_pred CCCeeec--CCCeEecCCCCCCCCc
Q psy6207 591 NSQGCDI--VTGKCICRPGFKGHRC 613 (823)
Q Consensus 591 ~~~~C~~--~~~~C~C~~G~~G~~C 613 (823)
++|++ ++|+|.|++||+++.-
T Consensus 80 --~~C~n~~gsy~C~C~~Gy~~~~d 102 (107)
T 2w2n_E 80 --QLCVNLEGGYKCQCEEGFQLDPH 102 (107)
T ss_dssp -------------------------
T ss_pred --CeeecCCCCEEEECCCCceECCC
Confidence 57864 6899999999998753
No 61
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=97.77 E-value=1e-05 Score=69.00 Aligned_cols=75 Identities=19% Similarity=0.292 Sum_probs=49.3
Q ss_pred CCCCCCC-CCCCCCCeecCC--CCeeecCCCCCCCCCCCCCCCCCcCCcccccccccCCCCCcccccccccccccccCce
Q psy6207 624 GEDCSLD-CGCNNGGTCNQL--DGGCNCGRGYQGKLCTAPCPEGQYGYNCKEECLTKGQDVPVRTAVSHALKVHMGINAR 700 (823)
Q Consensus 624 ~~~C~~~-~~C~~~g~C~~~--~~~C~C~~Gy~G~~C~~~c~~g~~g~~C~~~c~c~~~~~~~~~~~~~~~~~~c~~~g~ 700 (823)
+|||+.. .+|.+ ++|+++ .|+|.|++||++..- .|..|++..+|. .....|. ++
T Consensus 3 ideC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~~~~~--------~g~~C~dideC~------------~~~~~C~-~~- 59 (86)
T 1lmj_A 3 IDECRISPDLCGR-GQCVNTPGDFECKCDEGYESGFM--------MMKNCMDIDECQ------------RDPLLCR-GG- 59 (86)
T ss_dssp CCTTTTCSSTTTT-SCEEEETTEEEECCCSSEEECTT--------TSSSEEECCHHH------------HCSSTTT-TS-
T ss_pred cccccCCCCCCCC-CEEECCCCCEEeeCCCCcCccCC--------CCCccCCccccc------------CCCCcCC-CC-
Confidence 6899875 14965 599986 469999999984310 122332222222 0111243 57
Q ss_pred eeeeeeeceeeecccceeEeecccceeeecCCeeecc
Q psy6207 701 RYVNVRMVATFNTTLYLYLFVNLTYGILYKTLVRLRE 737 (823)
Q Consensus 701 ~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~G~~g~~ 737 (823)
+|+++.|+|+ |+|++||++..
T Consensus 60 ---------~C~n~~g~y~-------C~C~~G~~~~~ 80 (86)
T 1lmj_A 60 ---------VCHNTEGSYR-------CECPPGHQLSP 80 (86)
T ss_dssp ---------EEEEETTEEE-------EESCTTSCCCS
T ss_pred ---------EeEcCCCCEE-------EECcCCcccCC
Confidence 9999999998 99999999874
No 62
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.75 E-value=2.5e-05 Score=83.93 Aligned_cols=74 Identities=26% Similarity=0.668 Sum_probs=57.3
Q ss_pred CCCCCCCCCCCCCCeeeCC--CcEEeCCCCCcCCCccccCcCCcCCCCCCC--CCCCCCCCCCeeec--CCCeEecCCCC
Q psy6207 535 GQNCTQECRCMNGAACNPQ--DGTCLCPAGYYGPLCQKRCEFMTYGRNCAQ--ACTCFTENSQGCDI--VTGKCICRPGF 608 (823)
Q Consensus 535 ~~~C~~~c~C~~~g~C~~~--~~~C~C~~G~~G~~C~~~c~~~~~g~~C~~--~~~C~~~~~~~C~~--~~~~C~C~~G~ 608 (823)
+++|..+ +|.++|+|++. .|+|.|++||+|..|+.+. ++|.. ..+| .+ +|.+ ++|+|.|++||
T Consensus 5 ~~~C~~~-pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~~------~eC~~~~~~~C--~~--~C~~~~g~~~C~C~~g~ 73 (317)
T 3h5c_B 5 GSPCISQ-PCLHNGSCQDSIWGYTCTCSPGYEGSNCELAK------NECHPERTDGC--QH--FCLPGQESYTCSCAQGY 73 (317)
T ss_dssp -CCTTSC-CCTTTCCCCCCSSSCCCCCSSSCCSSSSCCCS------SSCCTTCTTSC--SS--EEECCSSSCEEECCTTE
T ss_pred CCcCCCC-CCCCCCEeECCCCCeEEECCCCCcCCccccCc------ccCCCCCCCCC--cC--ccccCCCeeEEeccccc
Confidence 5789888 99999999976 5799999999999998433 46765 2578 54 8875 58999999999
Q ss_pred CCCCccccCCC
Q psy6207 609 KGHRCETQCSN 619 (823)
Q Consensus 609 ~G~~C~~~c~~ 619 (823)
+|..-...|.+
T Consensus 74 ~~~~~~~~C~~ 84 (317)
T 3h5c_B 74 RLGEDHKQCVP 84 (317)
T ss_dssp ECCTTSSCCEE
T ss_pred ccccccccccc
Confidence 98754444443
No 63
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.75 E-value=3.5e-06 Score=78.40 Aligned_cols=70 Identities=19% Similarity=0.303 Sum_probs=22.2
Q ss_pred ccccccccCceeeeeeeeceeeecccceeEeecccceeeecCCeeecccCccCCCCCCCCCCCC-CCCCCCCCeecCC--
Q psy6207 690 ALKVHMGINARRYVNVRMVATFNTTLYLYLFVNLTYGILYKTLVRLRECEERCPPGTHGPSCIN-RCRCQNGAICNPA-- 766 (823)
Q Consensus 690 ~~~~~c~~~g~~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~G~~g~~C~~~C~~g~~G~~C~~-~C~C~~~g~C~~~-- 766 (823)
+...+|.++| +|+++.++|+ |.|++||+|..|++.. .+.|.. ..+|.+ +|+++
T Consensus 45 C~~~pC~n~g----------~C~~~~~~y~-------C~C~~G~~G~~C~~~i-----~d~C~~~~~~C~~--~C~~~~g 100 (134)
T 2vh0_B 45 CETSPCQNQG----------KCKDGLGEYT-------CTCLEGFEGKNCELFT-----RKLCSLDNGDCDQ--FCHEEQN 100 (134)
T ss_dssp ----------------------------------------------------------CCGGGTGGGGCSS--EEEEETT
T ss_pred CCCCCCCCcC----------CcccCCCCEE-------eeCCCCccCCccccCC-----CCccccCCCCCCC--EeECCCC
Confidence 3356788999 9999888888 9999999999998631 011221 224665 89876
Q ss_pred CCeeeCCCCCC----CCCCCC
Q psy6207 767 NGQCLCAPGWM----GSVCNV 783 (823)
Q Consensus 767 ~~~C~C~~G~~----G~~C~~ 783 (823)
+|+|.|++||+ |..|++
T Consensus 101 ~y~C~C~~Gy~l~~~g~~C~~ 121 (134)
T 2vh0_B 101 SVVCSCARGYTLADNGKACIP 121 (134)
T ss_dssp EEEEECCTTEEECTTSSCEEE
T ss_pred CEEEECCCCcEECCCCCccCc
Confidence 57999999999 777765
No 64
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.71 E-value=5.7e-06 Score=93.43 Aligned_cols=80 Identities=29% Similarity=0.772 Sum_probs=39.5
Q ss_pred ceeeCCCCCCCCCCCCCCCCCccCCCCCCCCCCCCCCeeeCCCcEEeCCCCCcCCCccccCcCCcCCCCCCCCCCCCCCC
Q psy6207 512 GQCVCRPGGAGQLCDRPCSEGRYGQNCTQECRCMNGAACNPQDGTCLCPAGYYGPLCQKRCEFMTYGRNCAQACTCFTEN 591 (823)
Q Consensus 512 ~~C~C~~G~~G~~C~~~c~~g~~~~~C~~~c~C~~~g~C~~~~~~C~C~~G~~G~~C~~~c~~~~~g~~C~~~~~C~~~~ 591 (823)
...+|.++|.|..|+. ++|.. +|.+ |+|++. ++|.|++||+|..|+. +.|.. +| .+
T Consensus 377 ~p~~C~~~~~g~~c~~--------~~C~~--~C~n-G~C~~~-~~C~C~~G~~G~~C~~--------~~C~~--~C--~~ 432 (463)
T 2wg3_C 377 MPEECRATVQPAQTLT--------SECSR--LCRN-GYCTPT-GKCCCSPGWEGDFCRT--------AKCEP--AC--RH 432 (463)
T ss_dssp SCGGGCCCCCCCCCCC--------CHHHH--HCCS-EEECTT-SCEEECTTEESTTSCE--------ECC----------
T ss_pred ccccCCCCCcCCCCcc--------ccccC--CCCC-CccCCC-CeECCCCCcCCCcCCc--------CcCCC--CC--CC
Confidence 3467888999999875 57875 6886 799864 5999999999999974 24654 78 88
Q ss_pred CCeeecCCCeEecCCCCCCCCcccc
Q psy6207 592 SQGCDIVTGKCICRPGFKGHRCETQ 616 (823)
Q Consensus 592 ~~~C~~~~~~C~C~~G~~G~~C~~~ 616 (823)
+++|+.. ++|.|++||+|..|+..
T Consensus 433 ~g~C~~~-~~C~C~~G~~G~~C~~~ 456 (463)
T 2wg3_C 433 GGVCVRP-NKCLCKKGYLGPQCEQV 456 (463)
T ss_dssp -------------------------
T ss_pred CCEECCC-CEEECCCCcccCCCCCC
Confidence 8999764 79999999999999864
No 65
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=97.70 E-value=7.5e-06 Score=72.82 Aligned_cols=53 Identities=34% Similarity=0.808 Sum_probs=19.2
Q ss_pred CeecCC--CCeeeCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCeeeccCc--eeecCCCCccC
Q psy6207 761 AICNPA--NGQCLCAPGWMG---SVCNVPCTPGMWGQGCTVPCECFNGASCHHVTG--ECQCEPGFKGQ 822 (823)
Q Consensus 761 g~C~~~--~~~C~C~~G~~G---~~C~~~C~~~~~g~~C~~~c~C~~~~~C~~~~g--~C~C~~G~~G~ 822 (823)
++|+++ +|+|.|++||+| ..|++. ++|....+|. ++|+++.+ +|.|++||+|+
T Consensus 41 ~~C~n~~g~y~C~C~~Gy~g~~g~~C~di-------deC~~~~~C~--~~C~n~~gsy~C~C~~Gy~~~ 100 (107)
T 2w2n_E 41 YVCNDLKIGYECLCPDGFQLVAQRRCEDI-------DECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD 100 (107)
T ss_dssp SEEECCSBSCEEECCTTCEEETTTEEEC-----------------------------------------
T ss_pred CEeEeCCCCeEEECCCCccccCCCccccc-------cccCCCCCcC--CeeecCCCCEEEECCCCceEC
Confidence 489886 689999999998 667642 4554333575 79998875 99999999975
No 66
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=97.59 E-value=2.7e-05 Score=84.94 Aligned_cols=81 Identities=38% Similarity=0.855 Sum_probs=64.3
Q ss_pred CCCCCCCe-ecCC------CCcccCCCCCcCCCCCCCCCCCCCCCC-----------CCCCCCCCCCC-eec--------
Q psy6207 175 CQCENGAG-CDPN------TGACDCLDGYMGTHCEEVCGPGRFGQN-----------CSQECQCRNGA-ECH-------- 227 (823)
Q Consensus 175 c~C~~~g~-C~~~------~g~C~C~~Gy~G~~C~~~C~~g~~g~~-----------C~~~~~C~~~g-~C~-------- 227 (823)
|.|++++. |+.. .++|.|+.+++|..||. |.+||++++ | .+|.|.+++ .|.
T Consensus 266 C~CnGHA~~C~~~~~~~~~~g~C~C~hnT~G~~CEr-C~pGy~g~p~~~at~~~~~~C-~pC~Cnghs~~C~~d~~~~~~ 343 (403)
T 2y38_A 266 CVCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCDR-CCPGFNQQPWKPATTDSANEC-QSCNCHGHAYDCYYDPEVDRR 343 (403)
T ss_dssp CCCTTBCSCEEESCTTSTTCEEECCCTTEESSSCCE-ECTTCCSSCCCCCCSSCCCCC-CCCCCTTSCSCEEECHHHHHT
T ss_pred cccCCCccccCCCCCCCccceEeECcCcCcCCCCCC-CCccccCCcccccccCCCccc-cccccCCCCcccccCcccccc
Confidence 57888876 8632 35799999999999997 999999873 4 456788776 473
Q ss_pred ----------CCCCccc-cCCCCCCCCCCcCCCCCCCCCCCC
Q psy6207 228 ----------PATGECS-CQPGFTGSLCEERCPPGTHGPSCI 258 (823)
Q Consensus 228 ----------~~~~~C~-C~~G~~G~~C~~~C~~g~~g~~C~ 258 (823)
..+++|. |+.+++|.+|| .|.+||+++.-.
T Consensus 344 ~~s~~~~~~~~~~G~C~~C~~nt~G~~CE-rC~~GYyg~p~~ 384 (403)
T 2y38_A 344 EASQNQDNVYQGGGVCLDCQHHTTGINCE-RCLPGFFRAPDQ 384 (403)
T ss_dssp TCCCCTTSCSCCCEEESSCCSSEESTTSC-EECTTCEECTTS
T ss_pred cccccccccCCCCCCCCCCcCcCcCCCCC-cCCCCccCCCCC
Confidence 2367996 99999999999 599999987654
No 67
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.58 E-value=7.7e-05 Score=80.01 Aligned_cols=66 Identities=30% Similarity=0.714 Sum_probs=54.6
Q ss_pred CCCCCCCcCCCCCCCCcccC--CCceeeCCCCCCCCCCCCCCCCCccCCCCCC---CCCCCCCCeeeCC--CcEEeCCCC
Q psy6207 490 GQDCSQTCLCSKEGSASCSP--GSGQCVCRPGGAGQLCDRPCSEGRYGQNCTQ---ECRCMNGAACNPQ--DGTCLCPAG 562 (823)
Q Consensus 490 g~~C~~~c~C~~~g~g~C~~--~~~~C~C~~G~~G~~C~~~c~~g~~~~~C~~---~c~C~~~g~C~~~--~~~C~C~~G 562 (823)
+++|... +|.+ +++|.+ .+|+|.|++||+|..|+.+ +++|.. . +|.+ +|+++ +|+|.|++|
T Consensus 5 ~~~C~~~-pC~~--~g~C~~~~~~~~C~C~~g~~g~~C~~~------~~eC~~~~~~-~C~~--~C~~~~g~~~C~C~~g 72 (317)
T 3h5c_B 5 GSPCISQ-PCLH--NGSCQDSIWGYTCTCSPGYEGSNCELA------KNECHPERTD-GCQH--FCLPGQESYTCSCAQG 72 (317)
T ss_dssp -CCTTSC-CCTT--TCCCCCCSSSCCCCCSSSCCSSSSCCC------SSSCCTTCTT-SCSS--EEECCSSSCEEECCTT
T ss_pred CCcCCCC-CCCC--CCEeECCCCCeEEECCCCCcCCccccC------cccCCCCCCC-CCcC--ccccCCCeeEEecccc
Confidence 4677765 8999 899986 4799999999999999843 589986 4 8987 99987 679999999
Q ss_pred CcCCC
Q psy6207 563 YYGPL 567 (823)
Q Consensus 563 ~~G~~ 567 (823)
|+|..
T Consensus 73 ~~~~~ 77 (317)
T 3h5c_B 73 YRLGE 77 (317)
T ss_dssp EECCT
T ss_pred ccccc
Confidence 99853
No 68
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=97.49 E-value=4.4e-05 Score=83.21 Aligned_cols=69 Identities=30% Similarity=0.744 Sum_probs=56.4
Q ss_pred ceeeccCCCCCCccccCCCCCCCCC-----------CCCCCCCCCCCCe-ec------------------CCCCccc-CC
Q psy6207 145 NTCKCEVGFGGPTCNIECPEGHYGP-----------DCKLACQCENGAG-CD------------------PNTGACD-CL 193 (823)
Q Consensus 145 ~~C~C~~Gy~G~~C~~~c~~g~~g~-----------~C~~~c~C~~~g~-C~------------------~~~g~C~-C~ 193 (823)
.+|.|+.+++|..|+ .|.+||+|. .| ..|.|.+++. |. ..+|.|. |+
T Consensus 286 g~C~C~hnT~G~~CE-rC~pGy~g~p~~~at~~~~~~C-~pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~ 363 (403)
T 2y38_A 286 LQCACQHNTCGGSCD-RCCPGFNQQPWKPATTDSANEC-QSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQ 363 (403)
T ss_dssp EEECCCTTEESSSCC-EECTTCCSSCCCCCCSSCCCCC-CCCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCC
T ss_pred eEeECcCcCcCCCCC-CCCccccCCcccccccCCCccc-cccccCCCCcccccCcccccccccccccccCCCCCCCCCCc
Confidence 569999999999999 599999986 45 3467887764 72 2467995 99
Q ss_pred CCCcCCCCCCCCCCCCCCCCCCC
Q psy6207 194 DGYMGTHCEEVCGPGRFGQNCSQ 216 (823)
Q Consensus 194 ~Gy~G~~C~~~C~~g~~g~~C~~ 216 (823)
++++|.+||. |.+||||+.-..
T Consensus 364 ~nt~G~~CEr-C~~GYyg~p~~~ 385 (403)
T 2y38_A 364 HHTTGINCER-CLPGFFRAPDQP 385 (403)
T ss_dssp SSEESTTSCE-ECTTCEECTTSC
T ss_pred CcCcCCCCCc-CCCCccCCCCCC
Confidence 9999999997 999999987653
No 69
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.48 E-value=7.2e-05 Score=53.18 Aligned_cols=34 Identities=35% Similarity=1.056 Sum_probs=30.1
Q ss_pred CCCCCCCCCCCCCCeeeCC--CcEEeCCCCCcCCCcc
Q psy6207 535 GQNCTQECRCMNGAACNPQ--DGTCLCPAGYYGPLCQ 569 (823)
Q Consensus 535 ~~~C~~~c~C~~~g~C~~~--~~~C~C~~G~~G~~C~ 569 (823)
+++|..+ +|.++|+|++. +|+|.|++||+|..|+
T Consensus 3 ~d~C~~~-pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce 38 (39)
T 1edm_B 3 GDQCESN-PCLNGGSCKDDINSYECWCPFGFEGKNCE 38 (39)
T ss_dssp CCTTTTC-CCCTTCEEEEETTEEEEECCTTCCSTTSC
T ss_pred cccCCCC-CCCCCCEeEcCCCceEeECCCCCcCCccC
Confidence 5789877 99999999976 5699999999999886
No 70
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=97.47 E-value=2.9e-05 Score=84.33 Aligned_cols=102 Identities=23% Similarity=0.537 Sum_probs=62.9
Q ss_pred CCCCCCCCcccC---CCCcccCCCCccCCCCCccCCCCCCcCCCCCccccccCCCCCcccccCCCCCCCccccCCc---e
Q psy6207 73 CSCPVESMECSR---IDGNCSCPPGFRGAKCKERTCPDGLYGEGCDRTCECNVENTKLCVPVCTDECIRGTCIAPN---T 146 (823)
Q Consensus 73 C~C~~~~~~C~~---~~~~C~C~~G~~G~~C~~~~C~~~~~g~~C~~~C~C~~~~~~~C~~~c~~~C~~G~C~~~~---~ 146 (823)
|.|.+++..|.. ..+.|.|++||+|..|+ +|..+|+|..+. +|++.+.. .
T Consensus 255 C~Cngh~s~c~~~~~~~~~C~C~~nt~G~~Ce--~C~~gy~~~p~~----------------------~g~~~~~~~C~~ 310 (375)
T 4aqt_A 255 CKCNGHASECVKNEFDKLMCNCKHNTYGVDCE--KCLPFFNDRPWR----------------------RATAESASECLP 310 (375)
T ss_dssp ECCTTSCSCEEECTTSCEEECCCTTEESTTSC--EECTTCCSSCCC----------------------CCCSSCCCCCCC
T ss_pred ecCCCCCcccCCCCCCCeeeeCcCCCcCCCcc--cCCCCCcCCCCC----------------------CCccCCCCCCCC
Confidence 678888844532 23479999999999999 888888875442 12222122 2
Q ss_pred eeccCCCCCCccccCCCCCCCCCCCCCCCCCCCCCeecCCCCcc-cCCCCCcCCCCCCCCCCCCCCCCCCCC
Q psy6207 147 CKCEVGFGGPTCNIECPEGHYGPDCKLACQCENGAGCDPNTGAC-DCLDGYMGTHCEEVCGPGRFGQNCSQE 217 (823)
Q Consensus 147 C~C~~Gy~G~~C~~~c~~g~~g~~C~~~c~C~~~g~C~~~~g~C-~C~~Gy~G~~C~~~C~~g~~g~~C~~~ 217 (823)
|.|... |..|..+. . -..|....|+| .|++||+|.+|+. |.+|||++.....
T Consensus 311 C~Cn~~--g~~C~~d~-------~---------~~~c~~~~G~C~~C~~n~~G~~Ce~-C~~Gyyg~~~~~~ 363 (375)
T 4aqt_A 311 CDCNGR--SQECYFDP-------E---------LYRSTGHGGHCTNCRDNTDGAKCER-CRENFFRLGNTEA 363 (375)
T ss_dssp CCGGGS--CSCEEECH-------H---------HHHHSSCCEEECSCTTTEESTTSCE-ECSSEECCTTCSS
T ss_pred CcCcCC--CCCccccc-------c---------cCccCCCCCCCCCCCCCCcCCCCCC-CCcCcccCcCCCC
Confidence 445432 33332100 0 00122245566 5999999999987 9999999865443
No 71
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=97.45 E-value=3.7e-05 Score=83.54 Aligned_cols=84 Identities=26% Similarity=0.642 Sum_probs=61.1
Q ss_pred CCCCCCCeec---C-CCCcccCCCCCcCCCCCCCCCCCCCCCCCCC----------CCCCCCCC-ee---------cCCC
Q psy6207 175 CQCENGAGCD---P-NTGACDCLDGYMGTHCEEVCGPGRFGQNCSQ----------ECQCRNGA-EC---------HPAT 230 (823)
Q Consensus 175 c~C~~~g~C~---~-~~g~C~C~~Gy~G~~C~~~C~~g~~g~~C~~----------~~~C~~~g-~C---------~~~~ 230 (823)
|.|++++... + ..+.|.|++||+|.+|+. |.++|+++++.. +|.|..++ .| ...+
T Consensus 255 C~Cngh~s~c~~~~~~~~~C~C~~nt~G~~Ce~-C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~c~~~~ 333 (375)
T 4aqt_A 255 CKCNGHASECVKNEFDKLMCNCKHNTYGVDCEK-CLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHG 333 (375)
T ss_dssp ECCTTSCSCEEECTTSCEEECCCTTEESTTSCE-ECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHHHSSCC
T ss_pred ecCCCCCcccCCCCCCCeeeeCcCCCcCCCccc-CCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCccCCCC
Confidence 4677776542 1 344799999999999997 999999987532 24555444 23 2336
Q ss_pred Cccc-cCCCCCCCCCCcCCCCCCCCCCCCCC
Q psy6207 231 GECS-CQPGFTGSLCEERCPPGTHGPSCINR 260 (823)
Q Consensus 231 ~~C~-C~~G~~G~~C~~~C~~g~~g~~C~~~ 260 (823)
++|. |++||+|.+|+ .|.+|||++.....
T Consensus 334 G~C~~C~~n~~G~~Ce-~C~~Gyyg~~~~~~ 363 (375)
T 4aqt_A 334 GHCTNCRDNTDGAKCE-RCRENFFRLGNTEA 363 (375)
T ss_dssp EEECSCTTTEESTTSC-EECSSEECCTTCSS
T ss_pred CCCCCCCCCCcCCCCC-CCCcCcccCcCCCC
Confidence 7894 99999999998 59999998764433
No 72
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=97.22 E-value=3.8e-05 Score=58.52 Aligned_cols=40 Identities=28% Similarity=0.440 Sum_probs=33.1
Q ss_pred ceeeecCCeeecccCccCCCCCCCCCCCCCCCCCCCCeecC----C--CCeeeCCCCCCCCCCCC
Q psy6207 725 YGILYKTLVRLRECEERCPPGTHGPSCINRCRCQNGAICNP----A--NGQCLCAPGWMGSVCNV 783 (823)
Q Consensus 725 ~~C~C~~G~~g~~C~~~C~~g~~G~~C~~~C~C~~~g~C~~----~--~~~C~C~~G~~G~~C~~ 783 (823)
++|.|++||+.. +|+|+|+|++ . +|+|+|++||+|.+||.
T Consensus 3 ~~C~C~~g~~~~-------------------pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~ 48 (52)
T 3ca7_A 3 PTYKCPETFDAW-------------------YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEY 48 (52)
T ss_dssp CCBCCCHHHHHH-------------------TSCTTCEEEEEEETTEEEEEEECCTTEESTTSCE
T ss_pred eeeECCCCCcCC-------------------cCCCCCEEecCccCCCCCEEEECCCCCcCCCCcc
Confidence 348899999722 7999999995 2 57999999999999985
No 73
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.19 E-value=0.00021 Score=50.67 Aligned_cols=33 Identities=9% Similarity=-0.014 Sum_probs=28.5
Q ss_pred ccccccccCceeeeeeeeceeeecccceeEeecccceeeecCCeeecccC
Q psy6207 690 ALKVHMGINARRYVNVRMVATFNTTLYLYLFVNLTYGILYKTLVRLRECE 739 (823)
Q Consensus 690 ~~~~~c~~~g~~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~G~~g~~C~ 739 (823)
+...+|.++| +|+++.++|+ |.|++||+|.+|+
T Consensus 6 C~~~pC~ngg----------~C~~~~~~~~-------C~C~~G~~G~~Ce 38 (39)
T 1edm_B 6 CESNPCLNGG----------SCKDDINSYE-------CWCPFGFEGKNCE 38 (39)
T ss_dssp TTTCCCCTTC----------EEEEETTEEE-------EECCTTCCSTTSC
T ss_pred CCCCCCCCCC----------EeEcCCCceE-------eECCCCCcCCccC
Confidence 3456788999 9999888888 9999999999886
No 74
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=96.98 E-value=0.00067 Score=51.72 Aligned_cols=37 Identities=35% Similarity=0.734 Sum_probs=30.4
Q ss_pred CCCCCCC--CCCCCCCeec--CC--CCeeecCCCCCCCCCCCC
Q psy6207 624 GEDCSLD--CGCNNGGTCN--QL--DGGCNCGRGYQGKLCTAP 660 (823)
Q Consensus 624 ~~~C~~~--~~C~~~g~C~--~~--~~~C~C~~Gy~G~~C~~~ 660 (823)
+++|+.. .+|.++|+|+ +. .|+|.|++||+|.+|++.
T Consensus 3 i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ 45 (53)
T 1egf_A 3 YPGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTR 45 (53)
T ss_dssp ECCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCC
T ss_pred cccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCcc
Confidence 4677753 3899999998 54 569999999999999875
No 75
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=96.95 E-value=0.00028 Score=56.01 Aligned_cols=39 Identities=23% Similarity=0.589 Sum_probs=31.8
Q ss_pred CCCCCCCCCCCCCeeeC-------CCcEEeCCCCCcCCCccccCcCC
Q psy6207 536 QNCTQECRCMNGAACNP-------QDGTCLCPAGYYGPLCQKRCEFM 575 (823)
Q Consensus 536 ~~C~~~c~C~~~g~C~~-------~~~~C~C~~G~~G~~C~~~c~~~ 575 (823)
++|..+ ||+|+|+|++ ..|+|.|++||+|..|+..+++.
T Consensus 7 ~~C~~~-pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i~~~ 52 (63)
T 1hae_A 7 AEKEKT-FCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENVPMK 52 (63)
T ss_dssp CHHHHT-TSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEECCSS
T ss_pred CCCCCC-cCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCcCcc
Confidence 567666 9999999985 26799999999999998765543
No 76
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.80 E-value=0.00098 Score=73.83 Aligned_cols=71 Identities=27% Similarity=0.607 Sum_probs=52.2
Q ss_pred CCCCCCCCCCCCCeeeCC--CcEEeCCCCCc---CCCccccCcCCcCCCCCCCCCCCCCCCCCeeec--CCCeEecCCCC
Q psy6207 536 QNCTQECRCMNGAACNPQ--DGTCLCPAGYY---GPLCQKRCEFMTYGRNCAQACTCFTENSQGCDI--VTGKCICRPGF 608 (823)
Q Consensus 536 ~~C~~~c~C~~~g~C~~~--~~~C~C~~G~~---G~~C~~~c~~~~~g~~C~~~~~C~~~~~~~C~~--~~~~C~C~~G~ 608 (823)
+||... ++..+++|+++ +|+|.|++||+ |..|+++ ++|....+| .+ +|.+ ++|+|.|++||
T Consensus 1 ~eC~~~-~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~di-------deC~~~~~C--~~--~C~n~~g~~~C~C~~g~ 68 (400)
T 3p5b_L 1 NECLDN-NGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDI-------DECQDPDTC--SQ--LCVNLEGGYKCQCEEGF 68 (400)
T ss_dssp CCTTTT-GGGCSSEEEECSSSEEEECCTTEEECSSSCEEEC-------CCCSTTSSC--SS--CCBCCSSSCBCCCCTTC
T ss_pred CcccCC-CCCCCCEeECCCCCeEEECCCCCCcCCCCcccCc-------hhhhccCCC--CC--ccCCCccceeeeccccc
Confidence 366655 56666799986 67999999998 7888753 567765677 33 7764 68999999999
Q ss_pred CCCCccccCC
Q psy6207 609 KGHRCETQCS 618 (823)
Q Consensus 609 ~G~~C~~~c~ 618 (823)
++..-...|.
T Consensus 69 ~~~~~~~~C~ 78 (400)
T 3p5b_L 69 QLDPHTKACK 78 (400)
T ss_dssp CCCTTTSSCC
T ss_pred ccccccccee
Confidence 9875444443
No 77
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=96.74 E-value=0.00042 Score=51.07 Aligned_cols=35 Identities=34% Similarity=0.692 Sum_probs=28.7
Q ss_pred CCCCCC---CCCCCCCCeecCC----CCeeecCCCCCCCCCCCC
Q psy6207 624 GEDCSL---DCGCNNGGTCNQL----DGGCNCGRGYQGKLCTAP 660 (823)
Q Consensus 624 ~~~C~~---~~~C~~~g~C~~~----~~~C~C~~Gy~G~~C~~~ 660 (823)
+++|.. + ||.| |+|++. .|+|.|++||+|.+|+..
T Consensus 3 i~~C~~~~~~-pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 3 ITKCSSDMNG-YCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp EECCCTTCCS-SCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred cccCCCCCCC-CCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence 467776 5 9999 899853 469999999999999863
No 78
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.53 E-value=0.00045 Score=54.15 Aligned_cols=35 Identities=20% Similarity=0.469 Sum_probs=30.7
Q ss_pred CCCCCCCCCCCCC--CeeeCC--CcEEeCCCCCc-CCCccc
Q psy6207 535 GQNCTQECRCMNG--AACNPQ--DGTCLCPAGYY-GPLCQK 570 (823)
Q Consensus 535 ~~~C~~~c~C~~~--g~C~~~--~~~C~C~~G~~-G~~C~~ 570 (823)
+++|.++ ||+++ |+|++. +|+|.|++||+ |..|++
T Consensus 11 ~d~C~sn-PC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~ 50 (61)
T 2k2s_B 11 PAACSSN-PCGPEAAGTCKETNSGYICRCNQGYRISLDGTG 50 (61)
T ss_dssp CCHHHHC-SSCSSSCCEEEECSSEEEEECCTTEEEEECSSS
T ss_pred CCcCcCC-CCcCCCccccccCCCceEeECCCCCccCCCCCC
Confidence 5789877 99999 899987 56999999999 999874
No 79
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.53 E-value=0.0027 Score=70.27 Aligned_cols=55 Identities=22% Similarity=0.420 Sum_probs=42.6
Q ss_pred eeecccceeEeecccceeeecCCee---ecccCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeeeCCCCCCCCC
Q psy6207 710 TFNTTLYLYLFVNLTYGILYKTLVR---LRECEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCLCAPGWMGSV 780 (823)
Q Consensus 710 ~C~~~~g~~~~~~~~~~C~C~~G~~---g~~C~~~C~~g~~G~~C~~~C~C~~~g~C~~~--~~~C~C~~G~~G~~ 780 (823)
+|+++.++|. |.|++||+ |..|++. ++|...-+|++ +|+++ +|+|.|++||++..
T Consensus 13 ~C~~~~~~y~-------C~C~~G~~~~~~~~C~di-------deC~~~~~C~~--~C~n~~g~~~C~C~~g~~~~~ 72 (400)
T 3p5b_L 13 VCNDLKIGYE-------CLCPDGFQLVAQRRCEDI-------DECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLDP 72 (400)
T ss_dssp EEEECSSSEE-------EECCTTEEECSSSCEEEC-------CCCSTTSSCSS--CCBCCSSSCBCCCCTTCCCCT
T ss_pred EeECCCCCeE-------EECCCCCCcCCCCcccCc-------hhhhccCCCCC--ccCCCccceeeeccccccccc
Confidence 8999998888 99999999 6677653 34443235765 88887 78999999999764
No 80
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.47 E-value=0.0014 Score=51.30 Aligned_cols=36 Identities=14% Similarity=-0.017 Sum_probs=30.5
Q ss_pred ccccccccccC--ceeeeeeeeceeeecccceeEeecccceeeecCCee-ecccCc
Q psy6207 688 SHALKVHMGIN--ARRYVNVRMVATFNTTLYLYLFVNLTYGILYKTLVR-LRECEE 740 (823)
Q Consensus 688 ~~~~~~~c~~~--g~~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~G~~-g~~C~~ 740 (823)
+.+.+.+|.++ | +|+++.++|+ |.|++||+ |.+|++
T Consensus 12 d~C~snPC~nga~g----------tC~~~~g~y~-------C~C~~Gy~~G~~C~~ 50 (61)
T 2k2s_B 12 AACSSNPCGPEAAG----------TCKETNSGYI-------CRCNQGYRISLDGTG 50 (61)
T ss_dssp CHHHHCSSCSSSCC----------EEEECSSEEE-------EECCTTEEEEECSSS
T ss_pred CcCcCCCCcCCCcc----------ccccCCCceE-------eECCCCCccCCCCCC
Confidence 44456788898 8 9999999888 99999999 998875
No 81
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=96.47 E-value=0.0017 Score=47.52 Aligned_cols=29 Identities=41% Similarity=0.832 Sum_probs=25.3
Q ss_pred CCCCCCeee--CC--CcEEeCCCCCcCCCcccc
Q psy6207 543 RCMNGAACN--PQ--DGTCLCPAGYYGPLCQKR 571 (823)
Q Consensus 543 ~C~~~g~C~--~~--~~~C~C~~G~~G~~C~~~ 571 (823)
||+++|+|+ +. +|+|.|++||+|..|+..
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ 42 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTR 42 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCEE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCcc
Confidence 899999997 33 579999999999999864
No 82
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=96.34 E-value=0.002 Score=49.00 Aligned_cols=31 Identities=13% Similarity=-0.046 Sum_probs=27.2
Q ss_pred ccccCceeeeeeeeceeee--cccceeEeecccceeeecCCeeecccCcc
Q psy6207 694 HMGINARRYVNVRMVATFN--TTLYLYLFVNLTYGILYKTLVRLRECEER 741 (823)
Q Consensus 694 ~c~~~g~~~~~~~~~~~C~--~~~g~~~~~~~~~~C~C~~G~~g~~C~~~ 741 (823)
+|.++| +|+ +..++|+ |.|++||+|.+|+..
T Consensus 13 pC~ngg----------~C~~~~~~~~~~-------C~C~~G~~G~~Ce~~ 45 (53)
T 1egf_A 13 YCLNGG----------VCMHIESLDSYT-------CNCVIGYSGDRCQTR 45 (53)
T ss_dssp SSCSSC----------EEEEESSSSCEE-------EECCTTCCSSSSCCC
T ss_pred cCCCCc----------EEEeeCCCCCEE-------EECCCCCcCCcCCcc
Confidence 788999 998 7777887 999999999999864
No 83
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=96.31 E-value=0.0022 Score=46.96 Aligned_cols=31 Identities=13% Similarity=-0.034 Sum_probs=26.4
Q ss_pred ccccCceeeeeeeeceeee--cccceeEeecccceeeecCCeeecccCcc
Q psy6207 694 HMGINARRYVNVRMVATFN--TTLYLYLFVNLTYGILYKTLVRLRECEER 741 (823)
Q Consensus 694 ~c~~~g~~~~~~~~~~~C~--~~~g~~~~~~~~~~C~C~~G~~g~~C~~~ 741 (823)
+|.++| +|+ +..++|+ |.|++||+|.+|+..
T Consensus 10 pC~ngg----------~C~~~~~~~~~~-------C~C~~G~~G~~Ce~~ 42 (45)
T 1a3p_A 10 YCLNGG----------VXMHIESLDSYT-------CNCVIGYSGDRCQTR 42 (45)
T ss_dssp CCSSSC----------EEEECTTTSSEE-------EECCTTEETTTTCEE
T ss_pred CCCCCC----------EEEeecCCCCEE-------EEcCCCCcCCcCCcc
Confidence 688999 997 6667777 999999999999854
No 84
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=96.03 E-value=0.0036 Score=46.00 Aligned_cols=30 Identities=7% Similarity=-0.232 Sum_probs=24.2
Q ss_pred cccccCceeeeeeeeceeeeccc--ceeEeecccceeeecCCeeecccCc
Q psy6207 693 VHMGINARRYVNVRMVATFNTTL--YLYLFVNLTYGILYKTLVRLRECEE 740 (823)
Q Consensus 693 ~~c~~~g~~~~~~~~~~~C~~~~--g~~~~~~~~~~C~C~~G~~g~~C~~ 740 (823)
.+|.+ | +|.+.. ++|. |.|++||+|.+|+.
T Consensus 12 ~pC~n-G----------~C~~~~~~~~~~-------C~C~~GytG~~Ce~ 43 (46)
T 1k36_A 12 GYCLH-G----------QCIYLVDMSQNY-------CRCEVGYTGVRCEH 43 (46)
T ss_dssp SSCSS-E----------EEEEETTTTEEE-------EEECTTCSSTTSCC
T ss_pred CCCCC-C----------EeeccCCCCCEE-------EECCCCCccCCCCc
Confidence 56777 8 998644 4666 99999999999985
No 85
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.99 E-value=0.0013 Score=72.40 Aligned_cols=51 Identities=29% Similarity=0.783 Sum_probs=18.3
Q ss_pred eeeccCCCCcc----CCCCCCCCCCCCCCCCCCCCcCCCCCCCCcccC--CCceeeCCCCCC----CCCCCC
Q psy6207 466 TFLSLTHSGFS----GRHCEKPCPQGSYGQDCSQTCLCSKEGSASCSP--GSGQCVCRPGGA----GQLCDR 527 (823)
Q Consensus 466 s~~C~C~~Gy~----G~~C~~~C~~g~~g~~C~~~c~C~~~g~g~C~~--~~~~C~C~~G~~----G~~C~~ 527 (823)
+|+|.|++||+ |..|++ +++|....+|.+ . |++ ++|+|.|++||+ |..|+.
T Consensus 23 ~~~C~C~~G~~l~~~~~~C~d-------~~eC~~~~~C~~--~--C~~~~g~~~C~C~~g~~l~~d~~~C~~ 83 (386)
T 3v65_B 23 AVQCTCHTGYRLTEDGRTCQD-------VNECAEEGYCSQ--G--CTNSEGAFQCWCEAGYELRPDRRSCKA 83 (386)
T ss_dssp ------------------------------------CCTT--E--EC-----CCEECCTTEEECTTSSCEEE
T ss_pred CcEeECCCCceECCCCCccCc-------cceeCCcCcccC--c--CCCCCCCCeEEECCCceEcCCCCeECC
Confidence 89999999998 888876 588875446865 3 876 589999999998 777754
No 86
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=95.90 E-value=0.0063 Score=46.21 Aligned_cols=33 Identities=12% Similarity=-0.090 Sum_probs=27.5
Q ss_pred ccccccCceeeeeeeeceeee--cccceeEeecccceeeecCCeeecccCcc
Q psy6207 692 KVHMGINARRYVNVRMVATFN--TTLYLYLFVNLTYGILYKTLVRLRECEER 741 (823)
Q Consensus 692 ~~~c~~~g~~~~~~~~~~~C~--~~~g~~~~~~~~~~C~C~~G~~g~~C~~~ 741 (823)
..+|.++| +|+ +..++|. |.|++||+|.+|+..
T Consensus 11 ~~pC~nGG----------~C~~~~~~~~~~-------C~C~~GytG~~Ce~~ 45 (53)
T 1nql_B 11 DGYCLHDG----------VCMYIEALDKYA-------CNCVVGYIGERCQYR 45 (53)
T ss_dssp CCEECTTC----------EEEEETTTTEEE-------EEECTTEESTTSCEE
T ss_pred CCCCCCCe----------EEeeecCCCCEE-------EecCCCCcCCCCCcC
Confidence 45788999 997 5666777 999999999999875
No 87
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=95.81 E-value=0.0045 Score=48.92 Aligned_cols=36 Identities=14% Similarity=-0.005 Sum_probs=28.6
Q ss_pred ccccccccCceeeeeeeeceeeec-----ccceeEeecccceeeecCCeeecccCccC
Q psy6207 690 ALKVHMGINARRYVNVRMVATFNT-----TLYLYLFVNLTYGILYKTLVRLRECEERC 742 (823)
Q Consensus 690 ~~~~~c~~~g~~~~~~~~~~~C~~-----~~g~~~~~~~~~~C~C~~G~~g~~C~~~C 742 (823)
+...+|.|+| +|++ ..++|+ |.|++||+|.+|+...
T Consensus 9 C~~~pC~ngG----------~C~~~~~~~~~~~y~-------C~C~~Gf~G~~Ce~~i 49 (63)
T 1hae_A 9 KEKTFCVNGG----------ECFMVKDLSNPSRYL-------CKCQPGFTGARCTENV 49 (63)
T ss_dssp HHHTTSCTTC----------EEEEEESSSSSCCEE-------EECCTTEESTTSCEEC
T ss_pred CCCCcCCCCc----------EEecCCccCCCCCEE-------EECCCCCcCCccCcCc
Confidence 3456788999 9986 455666 9999999999998653
No 88
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=95.80 E-value=0.0021 Score=48.86 Aligned_cols=29 Identities=28% Similarity=0.773 Sum_probs=25.2
Q ss_pred CCCCCCeec--CC--CCeeeCCCCCCCCCCCCC
Q psy6207 756 RCQNGAICN--PA--NGQCLCAPGWMGSVCNVP 784 (823)
Q Consensus 756 ~C~~~g~C~--~~--~~~C~C~~G~~G~~C~~~ 784 (823)
+|.|+|+|+ +. +|+|+|++||+|.+||..
T Consensus 13 pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~ 45 (53)
T 1nql_B 13 YCLHDGVCMYIEALDKYACNCVVGYIGERCQYR 45 (53)
T ss_dssp EECTTCEEEEETTTTEEEEEECTTEESTTSCEE
T ss_pred CCCCCeEEeeecCCCCEEEecCCCCcCCCCCcC
Confidence 699999997 43 579999999999999864
No 89
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=95.77 E-value=0.0078 Score=54.50 Aligned_cols=58 Identities=26% Similarity=0.564 Sum_probs=42.9
Q ss_pred CCCCCCCeeeCC----Cc-EEeCCCCCcCCCccccCcCCcCCCCCCCCCCCCCCCCCeeecCCCeEecCCCCCCCCccc
Q psy6207 542 CRCMNGAACNPQ----DG-TCLCPAGYYGPLCQKRCEFMTYGRNCAQACTCFTENSQGCDIVTGKCICRPGFKGHRCET 615 (823)
Q Consensus 542 c~C~~~g~C~~~----~~-~C~C~~G~~G~~C~~~c~~~~~g~~C~~~~~C~~~~~~~C~~~~~~C~C~~G~~G~~C~~ 615 (823)
+||+|+|+|++. .+ +|.|++||+|.+|+..... +|...+ ..+|++.+..+++|..|+.
T Consensus 1 ~pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~~-----------~C~~g~-----G~~YrG~~~~t~sG~~Cq~ 63 (122)
T 2fd6_A 1 CDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSK-----------TCYEGN-----GHFYRGKASTDTMGRPCLP 63 (122)
T ss_dssp CCCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESSC-----------CSBCSS-----CTTCCSCCCBBTTSCBBCC
T ss_pred CCCCCcCCcCCCcccCCCCCccCCCCCCCccccccCcC-----------CCcccc-----cccceeeccccccCCcccC
Confidence 389999999875 34 8999999999999965321 342111 1368899999999988864
No 90
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=95.46 E-value=0.0041 Score=48.18 Aligned_cols=33 Identities=33% Similarity=0.604 Sum_probs=26.7
Q ss_pred CCCCCCeec--C--C--CCeeeCCCCCCCCCCCCCCCCC
Q psy6207 756 RCQNGAICN--P--A--NGQCLCAPGWMGSVCNVPCTPG 788 (823)
Q Consensus 756 ~C~~~g~C~--~--~--~~~C~C~~G~~G~~C~~~C~~~ 788 (823)
+|.|+|+|+ + . .|+|.|++||+|.+||..-..+
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~~~~~ 53 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKEIDN 53 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEECCCC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcccCCCC
Confidence 599999998 2 2 4699999999999999754443
No 91
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.44 E-value=0.003 Score=69.52 Aligned_cols=57 Identities=23% Similarity=0.466 Sum_probs=17.4
Q ss_pred eeecccceeEeecccceeeecCCee----ecccCccCCCCCCCCCCCCCCCCCCCCeecCC--CCeeeCCCCCC----CC
Q psy6207 710 TFNTTLYLYLFVNLTYGILYKTLVR----LRECEERCPPGTHGPSCINRCRCQNGAICNPA--NGQCLCAPGWM----GS 779 (823)
Q Consensus 710 ~C~~~~g~~~~~~~~~~C~C~~G~~----g~~C~~~C~~g~~G~~C~~~C~C~~~g~C~~~--~~~C~C~~G~~----G~ 779 (823)
+|.+..|+|+ |.|++||+ |..|++. ++|...-+|++. |+++ +|+|.|++||+ |.
T Consensus 16 ~C~~~~g~~~-------C~C~~G~~l~~~~~~C~d~-------~eC~~~~~C~~~--C~~~~g~~~C~C~~g~~l~~d~~ 79 (386)
T 3v65_B 16 KCQMIRGAVQ-------CTCHTGYRLTEDGRTCQDV-------NECAEEGYCSQG--CTNSEGAFQCWCEAGYELRPDRR 79 (386)
T ss_dssp --------------------------------------------------CCTTE--EC-----CCEECCTTEEECTTSS
T ss_pred CCcCCCCCcE-------eECCCCceECCCCCccCcc-------ceeCCcCcccCc--CCCCCCCCeEEECCCceEcCCCC
Confidence 7888888888 99999998 7777543 233211157753 8886 68999999998 66
Q ss_pred CCC
Q psy6207 780 VCN 782 (823)
Q Consensus 780 ~C~ 782 (823)
.|+
T Consensus 80 ~C~ 82 (386)
T 3v65_B 80 SCK 82 (386)
T ss_dssp CEE
T ss_pred eEC
Confidence 665
No 92
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=94.83 E-value=0.014 Score=44.07 Aligned_cols=31 Identities=16% Similarity=0.006 Sum_probs=24.4
Q ss_pred ccccCceeeeeeeeceeeecc----cceeEeecccceeeecCCeeecccCcc
Q psy6207 694 HMGINARRYVNVRMVATFNTT----LYLYLFVNLTYGILYKTLVRLRECEER 741 (823)
Q Consensus 694 ~c~~~g~~~~~~~~~~~C~~~----~g~~~~~~~~~~C~C~~G~~g~~C~~~ 741 (823)
+|.|+| +|++. .++|+ |+|++||+|.+||..
T Consensus 15 pC~NGG----------tC~~~~~~~~~~y~-------C~C~~Gf~G~~Ce~~ 49 (52)
T 3ca7_A 15 YCLNDA----------HCFAVKIADLPVYS-------CECAIGFMGQRCEYK 49 (52)
T ss_dssp TSCTTC----------EEEEEEETTEEEEE-------EECCTTEESTTSCEE
T ss_pred cCCCCC----------EEecCccCCCCCEE-------EECCCCCcCCCCccc
Confidence 455899 99863 44566 999999999999853
No 93
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=94.69 E-value=0.024 Score=43.87 Aligned_cols=35 Identities=14% Similarity=-0.051 Sum_probs=27.0
Q ss_pred ccccCceeeeeeeeceeeec----ccceeEeecccceeeecCCeeecccCccCCCC
Q psy6207 694 HMGINARRYVNVRMVATFNT----TLYLYLFVNLTYGILYKTLVRLRECEERCPPG 745 (823)
Q Consensus 694 ~c~~~g~~~~~~~~~~~C~~----~~g~~~~~~~~~~C~C~~G~~g~~C~~~C~~g 745 (823)
+|.|+| +|+. ..++|. |.|++||+|.+||..-+.+
T Consensus 15 pC~NGG----------tC~~~~~~~~~~~~-------C~C~~Gf~G~~Ce~~~~~~ 53 (58)
T 3ltf_D 15 YCLNDA----------HCFAVKIADLPVYS-------CECAIGFMGQRCEYKEIDN 53 (58)
T ss_dssp TSCSSC----------EEEEEEETTEEEEE-------EEECTTEESSSSCEECCCC
T ss_pred cCCCCC----------EEeCCccCCCCCEE-------eECCCCCccCCCcccCCCC
Confidence 688999 9973 334555 9999999999999765444
No 94
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=94.68 E-value=0.022 Score=51.47 Aligned_cols=59 Identities=15% Similarity=0.070 Sum_probs=42.6
Q ss_pred ccccCceeeeeeeeceeeeccc--cee-EeecccceeeecCCeeecccCccCCCCCCCCCCCCCCCCCCCCeecCCCCee
Q psy6207 694 HMGINARRYVNVRMVATFNTTL--YLY-LFVNLTYGILYKTLVRLRECEERCPPGTHGPSCINRCRCQNGAICNPANGQC 770 (823)
Q Consensus 694 ~c~~~g~~~~~~~~~~~C~~~~--g~~-~~~~~~~~C~C~~G~~g~~C~~~C~~g~~G~~C~~~C~C~~~g~C~~~~~~C 770 (823)
+|.|+| +|++.. ..| . |.|++||+|.+|++. .+. +|..+ ...+|++
T Consensus 2 pC~ngg----------tC~~~~~~~~~~~-------C~Cp~g~~G~~Ce~~----------~~~-~C~~g---~G~~YrG 50 (122)
T 2fd6_A 2 DCLNGG----------TCVSNKYFSNIHW-------CNCPKKFGGQHCEID----------KSK-TCYEG---NGHFYRG 50 (122)
T ss_dssp CCCSSC----------EEEECTTTTTCEE-------EECCTTEESTTSCEE----------SSC-CSBCS---SCTTCCS
T ss_pred CCCCcC----------CcCCCcccCCCCC-------ccCCCCCCCcccccc----------CcC-CCccc---cccccee
Confidence 366889 998753 233 5 999999999999975 111 24432 2247899
Q ss_pred eCCCCCCCCCCCC
Q psy6207 771 LCAPGWMGSVCNV 783 (823)
Q Consensus 771 ~C~~G~~G~~C~~ 783 (823)
.+..+++|..|+.
T Consensus 51 ~~~~t~sG~~Cq~ 63 (122)
T 2fd6_A 51 KASTDTMGRPCLP 63 (122)
T ss_dssp CCCBBTTSCBBCC
T ss_pred eccccccCCcccC
Confidence 9999999999986
No 95
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=94.08 E-value=0.024 Score=54.42 Aligned_cols=31 Identities=35% Similarity=0.918 Sum_probs=26.5
Q ss_pred ccCCCCCCC-ccccCCceeeccCCCCCCcccc
Q psy6207 130 PVCTDECIR-GTCIAPNTCKCEVGFGGPTCNI 160 (823)
Q Consensus 130 ~~c~~~C~~-G~C~~~~~C~C~~Gy~G~~C~~ 160 (823)
++|..+|.| |.|+++++|.|++||+|..|+.
T Consensus 149 ~~C~~~C~ngG~Cv~P~~C~C~~Gw~G~~C~~ 180 (188)
T 2ygo_A 149 AECPGGCRNGGFCNERRICECPDGFHGPHCEG 180 (188)
T ss_dssp CCCTTCCCTTCEECTTSCEECCTTCBTTTTCB
T ss_pred CccCCCCCCCCEeCCCCcccCcCCCCCCCCcC
Confidence 345667865 7999999999999999999985
No 96
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=92.78 E-value=0.056 Score=40.24 Aligned_cols=27 Identities=33% Similarity=0.877 Sum_probs=23.6
Q ss_pred CCCCCceeCC-----CCeeecCCCCcCCCCCC
Q psy6207 9 DECIRGTCIA-----PNTCKCEVGFGGPTCNI 35 (823)
Q Consensus 9 ~~C~~G~C~~-----~~~C~C~~G~~G~~C~~ 35 (823)
..|.||+|.. .+.|.|++||+|.+|+.
T Consensus 14 ~yC~nG~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 14 QFCFHGTCRFLVQEDKPACVCHSGYVGARCEH 45 (50)
T ss_pred CcccCCEEeeccCCCCeEEECCCCCcccCCCc
Confidence 5799999973 57999999999999986
No 97
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=92.18 E-value=0.086 Score=39.25 Aligned_cols=37 Identities=30% Similarity=0.701 Sum_probs=27.6
Q ss_pred CCCcccccCCCCCCCcccc-----CCceeeccCCCCCCcccc
Q psy6207 124 NTKLCVPVCTDECIRGTCI-----APNTCKCEVGFGGPTCNI 160 (823)
Q Consensus 124 ~~~~C~~~c~~~C~~G~C~-----~~~~C~C~~Gy~G~~C~~ 160 (823)
+.+.|.+...+-|+||+|. +...|.|+.||+|..|+.
T Consensus 8 ~~~~C~~~~~~yC~nG~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 8 KKNPCNAEFQNFCIHGECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp CCCTTTTTGGGTCSSSEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred cCcccCchhhCcCCCCEEEEecCCCCeeEECCCCcccccccc
Confidence 3345654445678899996 246899999999999984
No 98
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=91.82 E-value=0.048 Score=51.70 Aligned_cols=35 Identities=31% Similarity=0.839 Sum_probs=29.4
Q ss_pred CCCCCCCCCCCCCeeeCC--CcEEeCCCCCcCCCcccc
Q psy6207 536 QNCTQECRCMNGAACNPQ--DGTCLCPAGYYGPLCQKR 571 (823)
Q Consensus 536 ~~C~~~c~C~~~g~C~~~--~~~C~C~~G~~G~~C~~~ 571 (823)
++|... +|.++|+|++. .++|.|++||+|..||+.
T Consensus 120 ~~c~~~-~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~ 156 (162)
T 1g1s_A 120 ASCQDM-SCSKQGECLETIGNYTCSCYPGFYGPECEYV 156 (162)
T ss_dssp CCCCTT-GGGGSEEEEECSSSEEEEECTTEESTTSCEE
T ss_pred CCCcCC-CCCCCCEEecCCCCceEeCCCCCcCcccccC
Confidence 355555 89999999986 679999999999999865
No 99
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=91.54 E-value=0.14 Score=49.17 Aligned_cols=32 Identities=41% Similarity=1.099 Sum_probs=27.2
Q ss_pred CCCCCCCCCCCCeecCCCCeeecCCCCCCCCCCCC
Q psy6207 626 DCSLDCGCNNGGTCNQLDGGCNCGRGYQGKLCTAP 660 (823)
Q Consensus 626 ~C~~~~~C~~~g~C~~~~~~C~C~~Gy~G~~C~~~ 660 (823)
.|.. +|.|+|.|+. .++|.|++||+|..|+..
T Consensus 150 ~C~~--~C~ngG~Cv~-P~~C~C~~Gw~G~~C~~~ 181 (188)
T 2ygo_A 150 ECPG--GCRNGGFCNE-RRICECPDGFHGPHCEGT 181 (188)
T ss_dssp CCTT--CCCTTCEECT-TSCEECCTTCBTTTTCBC
T ss_pred ccCC--CCCCCCEeCC-CCcccCcCCCCCCCCcCC
Confidence 5653 8999999984 679999999999999864
No 100
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=90.98 E-value=0.12 Score=42.30 Aligned_cols=28 Identities=36% Similarity=0.898 Sum_probs=24.1
Q ss_pred CCCCCCceeCC-----CCeeecCCCCcCCCCCC
Q psy6207 8 TDECIRGTCIA-----PNTCKCEVGFGGPTCNI 35 (823)
Q Consensus 8 ~~~C~~G~C~~-----~~~C~C~~G~~G~~C~~ 35 (823)
.+.|.||+|+- .+.|.|++||+|.+|+.
T Consensus 45 ~~yClnG~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 45 KDFCIHGECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp TTCCSSEEECCBGGGTBCCEEECTTEESTTCCE
T ss_pred cCcCCCCEeeeecCCCCeEEEcCCCcccccccc
Confidence 47999999952 57899999999999985
No 101
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=90.89 E-value=0.17 Score=47.04 Aligned_cols=30 Identities=33% Similarity=0.934 Sum_probs=25.6
Q ss_pred CCCCCCCeeeCC----Cc-EEeCCCCCcCCCcccc
Q psy6207 542 CRCMNGAACNPQ----DG-TCLCPAGYYGPLCQKR 571 (823)
Q Consensus 542 c~C~~~g~C~~~----~~-~C~C~~G~~G~~C~~~ 571 (823)
++|+|+|+|+.. .+ +|.|++||.|.+|+..
T Consensus 13 cpC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~ 47 (145)
T 2i9a_A 13 CDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEID 47 (145)
T ss_dssp CCCCTTCEEEECSSSTTCEEEECCTTEESTTSCEE
T ss_pred CCCCCCCCcCCCccccCCccccCCCCCCCCceecc
Confidence 489999999864 34 8999999999999864
No 102
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=90.86 E-value=0.077 Score=39.51 Aligned_cols=28 Identities=36% Similarity=0.851 Sum_probs=23.3
Q ss_pred CCCCCCceeC--C---CCeeecCCCCcCCCCCC
Q psy6207 8 TDECIRGTCI--A---PNTCKCEVGFGGPTCNI 35 (823)
Q Consensus 8 ~~~C~~G~C~--~---~~~C~C~~G~~G~~C~~ 35 (823)
.+-|+||+|. . ...|.|++||+|.+|+.
T Consensus 17 ~~yC~nG~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 17 QNFCIHGECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GGTCSSSEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred hCcCCCCEEEEecCCCCeeEECCCCcccccccc
Confidence 3688999996 2 36899999999999985
No 103
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=90.81 E-value=0.077 Score=39.56 Aligned_cols=27 Identities=33% Similarity=0.935 Sum_probs=23.3
Q ss_pred CCCCCceeCC-----CCeeecCCCCcCCCCCC
Q psy6207 9 DECIRGTCIA-----PNTCKCEVGFGGPTCNI 35 (823)
Q Consensus 9 ~~C~~G~C~~-----~~~C~C~~G~~G~~C~~ 35 (823)
+-|.||+|.- ...|.|++||+|.+|+.
T Consensus 14 ~yC~nG~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 1iox_A 14 HYCIKGRCRFVVAEQTPSCVCDEGYIGARCER 45 (50)
T ss_dssp TSCTTCCEEEETTTTEEEECCCTTEETTTTCE
T ss_pred CcccCCEEEeEcCCCCeEEECCCCcccCCCCe
Confidence 6899999952 46899999999999986
No 104
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=90.59 E-value=0.13 Score=38.33 Aligned_cols=28 Identities=36% Similarity=0.899 Sum_probs=23.3
Q ss_pred CCCCCCcccc-----CCceeeccCCCCCCcccc
Q psy6207 133 TDECIRGTCI-----APNTCKCEVGFGGPTCNI 160 (823)
Q Consensus 133 ~~~C~~G~C~-----~~~~C~C~~Gy~G~~C~~ 160 (823)
.+.|.||+|. +.+.|.|++||+|.+|+.
T Consensus 13 ~~yC~nG~C~~~~~~~~~~C~C~~gy~G~RCe~ 45 (50)
T 3e50_C 13 TQFCFHGTCRFLVQEDKPACVCHSGYVGARCEH 45 (50)
T ss_pred cCcccCCEEeeccCCCCeEEECCCCCcccCCCc
Confidence 4578888885 357999999999999984
No 105
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=90.44 E-value=0.14 Score=48.44 Aligned_cols=33 Identities=15% Similarity=-0.016 Sum_probs=28.7
Q ss_pred ccccccCceeeeeeeeceeeecccceeEeecccceeeecCCeeecccCcc
Q psy6207 692 KVHMGINARRYVNVRMVATFNTTLYLYLFVNLTYGILYKTLVRLRECEER 741 (823)
Q Consensus 692 ~~~c~~~g~~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~G~~g~~C~~~ 741 (823)
+.+|.+++ +|++..++|. |+|++||+|..||++
T Consensus 124 ~~~C~~~g----------~C~~~~~~~~-------c~C~~g~~G~~Ce~~ 156 (162)
T 1g1s_A 124 DMSCSKQG----------ECLETIGNYT-------CSCYPGFYGPECEYV 156 (162)
T ss_dssp TTGGGGSE----------EEEECSSSEE-------EEECTTEESTTSCEE
T ss_pred CCCCCCCC----------EEecCCCCce-------EeCCCCCcCcccccC
Confidence 45677888 9999888888 999999999999975
No 106
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=89.57 E-value=0.23 Score=37.77 Aligned_cols=20 Identities=5% Similarity=-0.213 Sum_probs=17.8
Q ss_pred eeecccceeEeecccceeeecCCeeec
Q psy6207 710 TFNTTLYLYLFVNLTYGILYKTLVRLR 736 (823)
Q Consensus 710 ~C~~~~g~~~~~~~~~~C~C~~G~~g~ 736 (823)
.|+|+.|+|+ |.|++||+..
T Consensus 14 ~C~nt~Gsy~-------C~C~~Gy~L~ 33 (55)
T 2jkh_L 14 FCHEEQNSVV-------CSCARGYTLA 33 (55)
T ss_dssp EEEEETTEEE-------EECCTTEEEC
T ss_pred EeEcCCCCeE-------EeCCCCCEEC
Confidence 8999999988 9999999854
No 107
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=89.09 E-value=0.17 Score=47.07 Aligned_cols=31 Identities=32% Similarity=0.834 Sum_probs=26.2
Q ss_pred CCCCCCCCCeecCC----CC-eeeCCCCCCCCCCCC
Q psy6207 753 NRCRCQNGAICNPA----NG-QCLCAPGWMGSVCNV 783 (823)
Q Consensus 753 ~~C~C~~~g~C~~~----~~-~C~C~~G~~G~~C~~ 783 (823)
.+|+|+|||+|+.. .+ +|.|++||+|..|++
T Consensus 11 ~~cpC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei 46 (145)
T 2i9a_A 11 SNCDCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEI 46 (145)
T ss_dssp -CCCCCTTCEEEECSSSTTCEEEECCTTEESTTSCE
T ss_pred CCCCCCCCCCcCCCccccCCccccCCCCCCCCceec
Confidence 56799999999865 34 899999999999986
No 108
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=88.97 E-value=0.15 Score=58.51 Aligned_cols=35 Identities=31% Similarity=0.827 Sum_probs=30.6
Q ss_pred CCCCCCCCCCCCCCeecC---CCCeeecC-CCCCCCCCCC
Q psy6207 624 GEDCSLDCGCNNGGTCNQ---LDGGCNCG-RGYQGKLCTA 659 (823)
Q Consensus 624 ~~~C~~~~~C~~~g~C~~---~~~~C~C~-~Gy~G~~C~~ 659 (823)
+++|.++ ||.|+|+|++ ..|+|.|+ +||+|.+|+.
T Consensus 1 vd~C~s~-PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 1 ANPCCSN-PCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp CCTTTTC-CCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCCC-CCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 3688887 9999999995 25799999 9999999987
No 109
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=88.39 E-value=0.17 Score=57.77 Aligned_cols=36 Identities=28% Similarity=0.626 Sum_probs=31.7
Q ss_pred CCCCCCCCCCCCCCeeeC-C--CcEEeCC-CCCcCCCcccc
Q psy6207 535 GQNCTQECRCMNGAACNP-Q--DGTCLCP-AGYYGPLCQKR 571 (823)
Q Consensus 535 ~~~C~~~c~C~~~g~C~~-~--~~~C~C~-~G~~G~~C~~~ 571 (823)
+++|.++ ||+|+|+|++ . .|+|.|+ +||+|..||..
T Consensus 2 ~d~C~~~-PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 41 (553)
T 1q4g_A 2 VNPCCYY-PCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIP 41 (553)
T ss_dssp CCGGGGC-CCCTTCEEEEETTTEEEEECTTSSEETTTTCEE
T ss_pred CCcCCCC-CCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCC
Confidence 4789888 9999999998 4 5799999 99999999863
No 110
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=88.00 E-value=0.2 Score=40.94 Aligned_cols=35 Identities=31% Similarity=0.814 Sum_probs=25.9
Q ss_pred CcccccCCCCCCCcccc-----CCceeeccCCCCCCcccc
Q psy6207 126 KLCVPVCTDECIRGTCI-----APNTCKCEVGFGGPTCNI 160 (823)
Q Consensus 126 ~~C~~~c~~~C~~G~C~-----~~~~C~C~~Gy~G~~C~~ 160 (823)
+.|.+.-.+.|.||+|+ +.+.|.|++||+|..|+.
T Consensus 38 ~pC~~~~~~yClnG~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 38 DPCLRKYKDFCIHGECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp -CTTTTTTTCCSSEEECCBGGGTBCCEEECTTEESTTCCE
T ss_pred CCCCccccCcCCCCEeeeecCCCCeEEEcCCCcccccccc
Confidence 34543334678899994 357899999999999984
No 111
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=87.98 E-value=0.23 Score=56.91 Aligned_cols=34 Identities=29% Similarity=0.846 Sum_probs=30.2
Q ss_pred CCCCCCCCCCCCCeeeC---CCcEEeCC-CCCcCCCccc
Q psy6207 536 QNCTQECRCMNGAACNP---QDGTCLCP-AGYYGPLCQK 570 (823)
Q Consensus 536 ~~C~~~c~C~~~g~C~~---~~~~C~C~-~G~~G~~C~~ 570 (823)
++|.++ ||+|+|+|++ ..|+|.|+ +||+|..|+.
T Consensus 2 d~C~s~-PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~ 39 (587)
T 3nt1_A 2 NPCCSN-PCQNRGECMSTGFDQYKCDCTRTGFYGENCTT 39 (587)
T ss_dssp CTTTTC-CCCTTCEEEEEETTEEEEECTTSSEETTTTCE
T ss_pred CCCCCC-CCCCCCEeeCCCCCCeEEecCCCCccCCCCCC
Confidence 678888 9999999995 25799999 9999999996
No 112
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=87.70 E-value=0.21 Score=37.32 Aligned_cols=21 Identities=5% Similarity=-0.349 Sum_probs=17.9
Q ss_pred eeeecccceeEeecccceeeecCCeeec
Q psy6207 709 ATFNTTLYLYLFVNLTYGILYKTLVRLR 736 (823)
Q Consensus 709 ~~C~~~~g~~~~~~~~~~C~C~~G~~g~ 736 (823)
+.|+|+.|+|+ |.|++||+..
T Consensus 10 ~~C~n~~gs~~-------C~C~~Gy~L~ 30 (51)
T 1kig_L 10 QFCREERSEVR-------CSCAHGYVLG 30 (51)
T ss_dssp SCCCEETTEEC-------CCCCTTEEEC
T ss_pred CEeEcCCCCeE-------EeCCCCcEEC
Confidence 37888888888 9999999854
No 113
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=87.27 E-value=0.37 Score=36.25 Aligned_cols=21 Identities=5% Similarity=-0.327 Sum_probs=17.6
Q ss_pred eeeecccc-eeEeecccceeeecCCeeec
Q psy6207 709 ATFNTTLY-LYLFVNLTYGILYKTLVRLR 736 (823)
Q Consensus 709 ~~C~~~~g-~~~~~~~~~~C~C~~G~~g~ 736 (823)
+.|+++.| +|+ |.|++||+..
T Consensus 11 ~~C~n~~ggs~~-------C~C~~Gy~L~ 32 (53)
T 2bz6_L 11 QYCSDHTGTKRS-------CRCHEGYSLL 32 (53)
T ss_dssp SEEEEETTTEEE-------EECCTTEEEC
T ss_pred CEeEcCCCCCEE-------eeCCCCCEEC
Confidence 47888888 788 9999999854
No 114
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=85.89 E-value=0.2 Score=51.82 Aligned_cols=60 Identities=30% Similarity=0.690 Sum_probs=41.6
Q ss_pred CCCCCCeecCCCCccccCCCCCCCCCCcCCCCCCCCC-----CCCC---CCCCCCCCeecCCCCeeeCCCCCCC
Q psy6207 219 QCRNGAECHPATGECSCQPGFTGSLCEERCPPGTHGP-----SCIN---RCRCQNGAICNPANGQCLCAPGWMG 284 (823)
Q Consensus 219 ~C~~~g~C~~~~~~C~C~~G~~G~~C~~~C~~g~~g~-----~C~~---~c~C~~~g~C~~~~g~C~C~~G~~G 284 (823)
+|+++|+|. -+.|+|.+||+|+.|+ |....... .|.. .-.|+++|+|+ -|+|+|.++|.+
T Consensus 197 ~C~g~G~~~--CG~C~C~~g~~G~~Ce--C~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~--CG~C~C~~~~~~ 264 (280)
T 2p26_A 197 LCHGKGFLE--CGICRCDTGYIGKNCE--CQTQGRSSQELEGSCRKDNNSIICSGLGDCV--CGQCLCHTSDVP 264 (280)
T ss_dssp GGGGSEEEE--TTEEEECTTEESTTSC--EECTTSCHHHHHHTTCSSTTSCGGGGSEEEE--TTEEEECCCSST
T ss_pred ccCCCCeEC--CCceeCCCCCcCCcce--ecCCccccccccccCCCCCCCCccCCCceEe--CCeeECcCCCCC
Confidence 477788886 5899999999999997 33221101 3532 12588889995 579999888743
No 115
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=85.80 E-value=0.18 Score=52.18 Aligned_cols=60 Identities=27% Similarity=0.729 Sum_probs=41.8
Q ss_pred CCCCCCeecCCCCcccCCCCCcCCCCCCCCCCCCCCC-----CCCC---CCCCCCCCeecCCCCccccCCCCCC
Q psy6207 176 QCENGAGCDPNTGACDCLDGYMGTHCEEVCGPGRFGQ-----NCSQ---ECQCRNGAECHPATGECSCQPGFTG 241 (823)
Q Consensus 176 ~C~~~g~C~~~~g~C~C~~Gy~G~~C~~~C~~g~~g~-----~C~~---~~~C~~~g~C~~~~~~C~C~~G~~G 241 (823)
+|.++|++. -|.|.|.+||+|..|+ |+..-... .|.. .-+|+++|+|+ -++|+|.++|.+
T Consensus 197 ~C~g~G~~~--CG~C~C~~g~~G~~Ce--C~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~--CG~C~C~~~~~~ 264 (280)
T 2p26_A 197 LCHGKGFLE--CGICRCDTGYIGKNCE--CQTQGRSSQELEGSCRKDNNSIICSGLGDCV--CGQCLCHTSDVP 264 (280)
T ss_dssp GGGGSEEEE--TTEEEECTTEESTTSC--EECTTSCHHHHHHTTCSSTTSCGGGGSEEEE--TTEEEECCCSST
T ss_pred ccCCCCeEC--CCceeCCCCCcCCcce--ecCCccccccccccCCCCCCCCccCCCceEe--CCeeECcCCCCC
Confidence 477778884 5789999999999998 32221001 4532 12699999997 589999888643
No 116
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=85.67 E-value=0.66 Score=39.51 Aligned_cols=28 Identities=21% Similarity=0.621 Sum_probs=21.4
Q ss_pred CCCCCCCCCCCeecCC---CCeeecCCCCCCC
Q psy6207 627 CSLDCGCNNGGTCNQL---DGGCNCGRGYQGK 655 (823)
Q Consensus 627 C~~~~~C~~~g~C~~~---~~~C~C~~Gy~G~ 655 (823)
|... .|..++.|... ..+|.|.+||+|+
T Consensus 7 C~~~-~C~~NA~C~r~~~g~e~C~C~~gy~gd 37 (99)
T 1ob1_C 7 CVKK-QCPQNSGCFRHLDEREECKCLLNYKQE 37 (99)
T ss_dssp CCSC-CCCTTEEEECCTTSCCEEEECTTEEEE
T ss_pred eccC-CCCCCCCeEEcCCCCEEEEecCCeecC
Confidence 4444 78889999774 3389999999974
No 117
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=85.30 E-value=0.56 Score=34.97 Aligned_cols=20 Identities=10% Similarity=0.009 Sum_probs=18.5
Q ss_pred eeecccceeEeecccceeeecCCeeec
Q psy6207 710 TFNTTLYLYLFVNLTYGILYKTLVRLR 736 (823)
Q Consensus 710 ~C~~~~g~~~~~~~~~~C~C~~G~~g~ 736 (823)
+|+|+.|+|. |.|++||++.
T Consensus 25 ~C~n~~Gsy~-------C~C~~Gy~~~ 44 (53)
T 1apq_A 25 LCHNYVGGYF-------CSCRPGYELQ 44 (53)
T ss_dssp EEEEETTEEE-------EECSTTCEEC
T ss_pred EeECCCCCeE-------EECCCCCeEC
Confidence 8999999988 9999999986
No 118
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=85.28 E-value=0.85 Score=38.84 Aligned_cols=56 Identities=16% Similarity=0.200 Sum_probs=36.9
Q ss_pred eeec-ccceeEeecccceeeecCCeeec--ccCccCCCCCCCCCCCCCC-CCCCCCeecCCC-------CeeeCCCCCC
Q psy6207 710 TFNT-TLYLYLFVNLTYGILYKTLVRLR--ECEERCPPGTHGPSCINRC-RCQNGAICNPAN-------GQCLCAPGWM 777 (823)
Q Consensus 710 ~C~~-~~g~~~~~~~~~~C~C~~G~~g~--~C~~~C~~g~~G~~C~~~C-~C~~~g~C~~~~-------~~C~C~~G~~ 777 (823)
.|.. .+|..+ |.|.+||.|+ .|... .+..|...- -|..+|+|+.+. -.|.|.+||+
T Consensus 17 ~C~r~~~g~e~-------C~C~~gy~gdg~~Cv~~-----~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~g~~ 83 (99)
T 1ob1_C 17 GCFRHLDEREE-------CKCLLNYKQEGDKCVEN-----PNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTKPDS 83 (99)
T ss_dssp EEECCTTSCCE-------EEECTTEEEETTEEEEC-----SCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECSTTC
T ss_pred CeEEcCCCCEE-------EEecCCeecCCCeEeeC-----CCCChhhcCCCcCCCceeEecCCcccCCceEeEeCCCCc
Confidence 8865 456666 9999999986 33321 012233210 389999998763 4899999975
No 119
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=84.83 E-value=1 Score=38.64 Aligned_cols=30 Identities=20% Similarity=0.506 Sum_probs=22.9
Q ss_pred CCCCCCCCCCCCCeecCC-CC--eeecCCCCCCC
Q psy6207 625 EDCSLDCGCNNGGTCNQL-DG--GCNCGRGYQGK 655 (823)
Q Consensus 625 ~~C~~~~~C~~~g~C~~~-~~--~C~C~~Gy~G~ 655 (823)
..|... .|..++.|... .+ +|.|.+||+++
T Consensus 11 h~C~~t-~Cp~NA~C~r~~~G~e~CrCl~gY~~d 43 (105)
T 1n1i_A 11 HKCIDT-NVPENAACYRYLDGTEEWRCLLGFKEV 43 (105)
T ss_dssp TSCCSS-CCCTTEEEEECTTSCEEEEECTTEEEC
T ss_pred cEecCC-CCCCCCCeEECCCCCEeEEEECCeecc
Confidence 345555 78889999874 44 89999999975
No 120
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=84.40 E-value=0.16 Score=58.88 Aligned_cols=44 Identities=20% Similarity=0.439 Sum_probs=37.6
Q ss_pred CCCCCCCCCCCCC--CC--CCCCCCCcccCCCCcccCCCCccCCCCCccCC
Q psy6207 59 PCPEGTWGKQCVH--YC--SCPVESMECSRIDGNCSCPPGFRGAKCKERTC 105 (823)
Q Consensus 59 ~C~~g~~G~~C~~--~C--~C~~~~~~C~~~~~~C~C~~G~~G~~C~~~~C 105 (823)
.|.+||.|++|.+ .| .|.+|| .|+ .|+|.|.+||+|..|+++.+
T Consensus 521 ~C~~gw~g~dc~i~~~Cp~~C~ghG-~C~--~G~C~Cd~G~~G~~C~~~~~ 568 (725)
T 2e26_A 521 DKQQTWAIDNVYIGDGCLDMCSGHG-RCV--QGSCVCDEQWGGLYCDEPET 568 (725)
T ss_dssp CTTCCEEEEEEEEESCSSGGGGGSE-EEE--TTEEEECTTEESTTSCEESS
T ss_pred ccCCCcccccccccCCCCcccCCCc-EEC--CCCEeeCCCccCCCcCccCC
Confidence 6899999999983 46 699999 996 58999999999999996544
No 121
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=83.92 E-value=1.7 Score=37.29 Aligned_cols=55 Identities=13% Similarity=0.111 Sum_probs=36.3
Q ss_pred eeec-ccceeEeecccceeeecCCeeec--ccCccCCCCCCCCCCCCCC-CCCCCCeecCCC---CeeeCCCCCC
Q psy6207 710 TFNT-TLYLYLFVNLTYGILYKTLVRLR--ECEERCPPGTHGPSCINRC-RCQNGAICNPAN---GQCLCAPGWM 777 (823)
Q Consensus 710 ~C~~-~~g~~~~~~~~~~C~C~~G~~g~--~C~~~C~~g~~G~~C~~~C-~C~~~g~C~~~~---~~C~C~~G~~ 777 (823)
.|.. .+|.-+ |.|.+||.++ .|... =+.|...- -|..+|.|+.+. -.|.|..+|+
T Consensus 23 ~C~r~~~G~e~-------CrCl~gY~~dg~~Cv~~------Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 23 ACYRYLDGTEE-------WRCLLGFKEVGGKCVPA------SITCEENNGGCAPEAECTMDDKKEVECKCTKEGS 84 (105)
T ss_dssp EEEECTTSCEE-------EEECTTEEECSSSEEEC------CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred CeEECCCCCEe-------EEEECCeeccCCEEEEC------CcchhhcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence 8876 566666 9999999986 23221 01122110 289999998773 2899999974
No 122
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=83.36 E-value=0.43 Score=35.61 Aligned_cols=13 Identities=8% Similarity=0.347 Sum_probs=11.8
Q ss_pred eeeccCCCCccCC
Q psy6207 466 TFLSLTHSGFSGR 478 (823)
Q Consensus 466 s~~C~C~~Gy~G~ 478 (823)
+|+|.|++||++.
T Consensus 32 sy~C~C~~Gy~~~ 44 (53)
T 1apq_A 32 GYFCSCRPGYELQ 44 (53)
T ss_dssp EEEEECSTTCEEC
T ss_pred CeEEECCCCCeEC
Confidence 9999999999865
No 123
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=82.49 E-value=0.8 Score=33.98 Aligned_cols=17 Identities=12% Similarity=-0.019 Sum_probs=14.4
Q ss_pred ceeeecCCeeecccCcc
Q psy6207 725 YGILYKTLVRLRECEER 741 (823)
Q Consensus 725 ~~C~C~~G~~g~~C~~~ 741 (823)
+.|.|++||+|.+||..
T Consensus 30 ~~C~C~~gy~G~RCe~~ 46 (50)
T 1iox_A 30 PSCVCDEGYIGARCERV 46 (50)
T ss_dssp EEECCCTTEETTTTCEE
T ss_pred eEEECCCCcccCCCCee
Confidence 34999999999999863
No 124
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=81.56 E-value=0.24 Score=57.28 Aligned_cols=45 Identities=20% Similarity=0.503 Sum_probs=37.0
Q ss_pred ecCCCCCCCCccccCCCCCccCCCCCCCCCCCCCCeecCCCCeeecCCCCCCCCCCC
Q psy6207 603 ICRPGFKGHRCETQCSNPNTYGEDCSLDCGCNNGGTCNQLDGGCNCGRGYQGKLCTA 659 (823)
Q Consensus 603 ~C~~G~~G~~C~~~c~~~~~~~~~C~~~~~C~~~g~C~~~~~~C~C~~Gy~G~~C~~ 659 (823)
+|.+||+|+.|.+. ..|.. .|..+|.|+ .++|+|.+||+|..|+.
T Consensus 521 ~C~~gw~g~dc~i~--------~~Cp~--~C~ghG~C~--~G~C~Cd~G~~G~~C~~ 565 (725)
T 2e26_A 521 DKQQTWAIDNVYIG--------DGCLD--MCSGHGRCV--QGSCVCDEQWGGLYCDE 565 (725)
T ss_dssp CTTCCEEEEEEEEE--------SCSSG--GGGGSEEEE--TTEEEECTTEESTTSCE
T ss_pred ccCCCccccccccc--------CCCCc--ccCCCcEEC--CCCEeeCCCccCCCcCc
Confidence 78999999999831 23432 799999996 57999999999999975
No 125
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=81.25 E-value=0.8 Score=36.75 Aligned_cols=26 Identities=15% Similarity=-0.113 Sum_probs=19.5
Q ss_pred cccccCceeeeeeeeceeeecccceeEeecccceeeec-CCeee
Q psy6207 693 VHMGINARRYVNVRMVATFNTTLYLYLFVNLTYGILYK-TLVRL 735 (823)
Q Consensus 693 ~~c~~~g~~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~-~G~~g 735 (823)
.+|.+++ +|+|+.|+|+ |.+. .||++
T Consensus 11 ~~C~~~~----------~C~Nt~Gsy~-------C~~~~~g~~~ 37 (71)
T 2kl7_A 11 EACKGEM----------KCINHYGGYL-------CLPRSAAVIN 37 (71)
T ss_dssp CSCTTEE----------EEEETTCCEE-------EEETTSCCCS
T ss_pred CCCCCCC----------EeECCCCCeE-------ecccCCcccc
Confidence 3566777 9999999999 8743 56654
No 126
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=80.79 E-value=0.68 Score=47.63 Aligned_cols=28 Identities=4% Similarity=-0.135 Sum_probs=25.0
Q ss_pred ccccccCceeeeeeeeceeeecccceeEeecccceeeecCCeeec
Q psy6207 692 KVHMGINARRYVNVRMVATFNTTLYLYLFVNLTYGILYKTLVRLR 736 (823)
Q Consensus 692 ~~~c~~~g~~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~G~~g~ 736 (823)
..+|..++ .|+|+.|+|. |.|++||+|+
T Consensus 12 ~~~C~~~a----------~C~Nt~Gsy~-------C~C~~Gy~Gn 39 (285)
T 1gl4_A 12 RHQCSVHA----------ECRDYATGFC-------CRCVANYTGN 39 (285)
T ss_dssp GGGSCTTE----------EEEECSSCEE-------EEECTTEEEC
T ss_pred CCCCCCCC----------EeEcCCCCeE-------EEcCCCCCCC
Confidence 45788889 9999999999 9999999965
No 127
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=80.00 E-value=1 Score=42.29 Aligned_cols=32 Identities=6% Similarity=-0.129 Sum_probs=27.7
Q ss_pred cccccCceeeeeeeeceeeecccceeEeecccceeeecCCeeecccCcc
Q psy6207 693 VHMGINARRYVNVRMVATFNTTLYLYLFVNLTYGILYKTLVRLRECEER 741 (823)
Q Consensus 693 ~~c~~~g~~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~G~~g~~C~~~ 741 (823)
.+|.+++ +|.+..++|. |.|.+||+|..|+++
T Consensus 125 ~~C~~~g----------~C~~~~~~~~-------c~C~~g~~g~~C~~~ 156 (164)
T 3cfw_A 125 WSCSGHG----------ECVEIINNYT-------CNCDVGYYGPQCQFV 156 (164)
T ss_dssp TSSCSSE----------EEEEETTEEE-------EEECTTCBSSSSCBC
T ss_pred CcCCCCC----------eecccCCCce-------eeeCCCccccccccc
Confidence 4677888 9998888888 999999999999864
No 128
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=79.24 E-value=0.99 Score=51.50 Aligned_cols=35 Identities=11% Similarity=-0.125 Sum_probs=30.1
Q ss_pred cccccccccCceeeeeeeeceeeec-ccceeEeecccceeeec-CCeeecccCc
Q psy6207 689 HALKVHMGINARRYVNVRMVATFNT-TLYLYLFVNLTYGILYK-TLVRLRECEE 740 (823)
Q Consensus 689 ~~~~~~c~~~g~~~~~~~~~~~C~~-~~g~~~~~~~~~~C~C~-~G~~g~~C~~ 740 (823)
.+.+.+|.|+| +|.+ ..++|. |.|+ +||+|.+||.
T Consensus 4 ~C~~~PC~ngG----------~C~~~~~~~y~-------C~C~~~G~~G~~Ce~ 40 (553)
T 1q4g_A 4 PCCYYPCQHQG----------ICVRFGLDRYQ-------CDCTRTGYSGPNCTI 40 (553)
T ss_dssp GGGGCCCCTTC----------EEEEETTTEEE-------EECTTSSEETTTTCE
T ss_pred cCCCCCCCCCC----------CcCCCCCCceE-------eeCCCCCcCCCCCCC
Confidence 34567888999 9998 777888 9999 9999999986
No 129
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=78.05 E-value=0.48 Score=44.28 Aligned_cols=35 Identities=29% Similarity=0.741 Sum_probs=28.5
Q ss_pred CCCCCCCCCCCCCeeeCC--CcEEeCCCCCcCCCcccc
Q psy6207 536 QNCTQECRCMNGAACNPQ--DGTCLCPAGYYGPLCQKR 571 (823)
Q Consensus 536 ~~C~~~c~C~~~g~C~~~--~~~C~C~~G~~G~~C~~~ 571 (823)
..|... +|.++++|.+. .|.|.|.+||+|+.||..
T Consensus 120 ~~~~~~-pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 120 AACTNT-SCSGHGECVETINNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp CCCCTT-GGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred CCCCCC-CCCCCCEeecCCCCeeEECCCCccCcccccc
Confidence 345555 88899999875 569999999999999864
No 130
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=77.38 E-value=1.4 Score=41.08 Aligned_cols=33 Identities=12% Similarity=0.032 Sum_probs=27.9
Q ss_pred ccccccCceeeeeeeeceeeecccceeEeecccceeeecCCeeecccCcc
Q psy6207 692 KVHMGINARRYVNVRMVATFNTTLYLYLFVNLTYGILYKTLVRLRECEER 741 (823)
Q Consensus 692 ~~~c~~~g~~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~G~~g~~C~~~ 741 (823)
..+|.+++ .|.+..++|. |.|.+||+|..||++
T Consensus 124 ~~pc~~~g----------~C~~~~~~~~-------c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 124 NTSCSGHG----------ECVETINNYT-------CKCDPGFSGLKCEQI 156 (157)
T ss_dssp TTGGGGSE----------EEEEETTEEE-------EEECTTEESTTSCEE
T ss_pred CCCCCCCC----------EeecCCCCee-------EECCCCccCcccccc
Confidence 35677888 9998888888 999999999999863
No 131
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=77.30 E-value=0.95 Score=42.59 Aligned_cols=33 Identities=39% Similarity=0.879 Sum_probs=27.1
Q ss_pred CCCCCCCCCCCeeeCC--CcEEeCCCCCcCCCcccc
Q psy6207 538 CTQECRCMNGAACNPQ--DGTCLCPAGYYGPLCQKR 571 (823)
Q Consensus 538 C~~~c~C~~~g~C~~~--~~~C~C~~G~~G~~C~~~ 571 (823)
|... +|.++|+|++. +++|.|++||+|..|++.
T Consensus 122 ~~~~-~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~~ 156 (164)
T 3cfw_A 122 CQPW-SCSGHGECVEIINNYTCNCDVGYYGPQCQFV 156 (164)
T ss_dssp CCTT-SSCSSEEEEEETTEEEEEECTTCBSSSSCBC
T ss_pred CCCC-cCCCCCeecccCCCceeeeCCCccccccccc
Confidence 3344 89999999964 679999999999999864
No 132
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=76.02 E-value=0.75 Score=36.93 Aligned_cols=34 Identities=21% Similarity=0.470 Sum_probs=25.1
Q ss_pred CCCCCCC-CCCCCCCcccCCCCccccccccccccccceeecc-CCCCccCC
Q psy6207 430 GDNCSQH-CNCKNDALCFPRNGTNTYQYFFLQSLTLFTFLSL-THSGFSGR 478 (823)
Q Consensus 430 ~~~C~~~-~~C~~~g~C~~~~g~C~~~~~~~~~~~~~s~~C~-C~~Gy~G~ 478 (823)
++||... .+|.++++|+|+.| +|+|. +..||.+.
T Consensus 3 idEC~~~~~~C~~~~~C~Nt~G---------------sy~C~~~~~g~~~~ 38 (71)
T 2kl7_A 3 VNECLTIPEACKGEMKCINHYG---------------GYLCLPRSAAVIND 38 (71)
T ss_dssp SCCTTCCCCSCTTEEEEEETTC---------------CEEEEETTSCCCSC
T ss_pred cccccCCCCCCCCCCEeECCCC---------------CeEecccCCccccc
Confidence 5788653 37888888998887 89997 55677643
No 133
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=71.49 E-value=0.96 Score=34.20 Aligned_cols=18 Identities=17% Similarity=0.495 Sum_probs=13.7
Q ss_pred ceeeccCCCCcc----CCCCCC
Q psy6207 465 FTFLSLTHSGFS----GRHCEK 482 (823)
Q Consensus 465 ~s~~C~C~~Gy~----G~~C~~ 482 (823)
++|+|.|++||. |..|++
T Consensus 20 Gsy~C~C~~Gy~L~~d~~~C~d 41 (55)
T 2jkh_L 20 NSVVCSCARGYTLADNGKACIP 41 (55)
T ss_dssp TEEEEECCTTEEECTTSSCEEE
T ss_pred CCeEEeCCCCCEECCCCCeecc
Confidence 399999999996 445544
No 134
>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*
Probab=71.28 E-value=2.5 Score=33.61 Aligned_cols=22 Identities=5% Similarity=-0.340 Sum_probs=18.2
Q ss_pred ceeeecccc-eeEeecccceeeecCCeeec
Q psy6207 708 VATFNTTLY-LYLFVNLTYGILYKTLVRLR 736 (823)
Q Consensus 708 ~~~C~~~~g-~~~~~~~~~~C~C~~G~~g~ 736 (823)
.+.|+++.| +|+ |.|++||...
T Consensus 16 ~h~C~n~~g~s~~-------C~C~~Gy~L~ 38 (69)
T 1kli_L 16 EQYCSDHTGTKRS-------CRCHEGYSLL 38 (69)
T ss_dssp SSEEEEETTTEEE-------EECCTTEEEC
T ss_pred CCEeEcCCCCCEE-------EeCCCCCeEC
Confidence 348888888 788 9999999865
No 135
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=71.21 E-value=0.95 Score=46.56 Aligned_cols=35 Identities=31% Similarity=0.676 Sum_probs=27.1
Q ss_pred CCCCCC--CCCCCCCCeeeCC--CcEEeCCCCCc--CCCccc
Q psy6207 535 GQNCTQ--ECRCMNGAACNPQ--DGTCLCPAGYY--GPLCQK 570 (823)
Q Consensus 535 ~~~C~~--~c~C~~~g~C~~~--~~~C~C~~G~~--G~~C~~ 570 (823)
+|||.. . +|+.+++|+|+ +|+|.|++||+ |..|.+
T Consensus 5 iDEC~~~~~-~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~d 45 (285)
T 1gl4_A 5 QQTCANNRH-QCSVHAECRDYATGFCCRCVANYTGNGRQCVA 45 (285)
T ss_dssp --CHHHHGG-GSCTTEEEEECSSCEEEEECTTEEECSSSEEE
T ss_pred chhccCCCC-CCCCCCEeEcCCCCeEEEcCCCCCCCCCcCCC
Confidence 578873 4 89999999998 67999999999 446764
No 136
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=65.23 E-value=3.4 Score=45.21 Aligned_cols=35 Identities=31% Similarity=0.851 Sum_probs=30.1
Q ss_pred CCCCCCCCCCCCCeeeCC--CcEEeCCC-CCcCCCcccc
Q psy6207 536 QNCTQECRCMNGAACNPQ--DGTCLCPA-GYYGPLCQKR 571 (823)
Q Consensus 536 ~~C~~~c~C~~~g~C~~~--~~~C~C~~-G~~G~~C~~~ 571 (823)
+.|..+ +|.++|+|++. .++|.|+. ||+|..|++.
T Consensus 186 ~~C~~~-pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 186 TTCQED-SCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp SCCCTT-SSSTTCEEEECSSSEEEECTTTSEESTTSCEE
T ss_pred CCcccc-cCCCCCEecCCCCCceEeccCCcccCCCCCCC
Confidence 567777 99999999975 67999996 9999999864
No 137
>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*
Probab=49.19 E-value=9.1 Score=29.23 Aligned_cols=22 Identities=9% Similarity=-0.109 Sum_probs=17.9
Q ss_pred ceeeeccc-ceeEeecccceeeecCCeeec
Q psy6207 708 VATFNTTL-YLYLFVNLTYGILYKTLVRLR 736 (823)
Q Consensus 708 ~~~C~~~~-g~~~~~~~~~~C~C~~G~~g~ 736 (823)
.+.|+++. |+|. |.|++||...
T Consensus 10 ~~~C~n~~~gs~~-------C~C~~Gy~L~ 32 (59)
T 2wph_E 10 EQFCKNSADNKVV-------CSCTEGYRLA 32 (59)
T ss_dssp SSEEEECSTTCEE-------EECCTTEEEC
T ss_pred CCEeEeCCCCCEE-------eeCCCCcEEC
Confidence 34888888 5888 9999999864
No 138
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=46.28 E-value=7.3 Score=44.19 Aligned_cols=65 Identities=28% Similarity=0.680 Sum_probs=43.9
Q ss_pred CCCCCeecCCCCcccCCCCCc--CCCCCCCCCCCCCCCCCCCC-C-CCCCCCee-cCCCCccccCCCCCCC
Q psy6207 177 CENGAGCDPNTGACDCLDGYM--GTHCEEVCGPGRFGQNCSQE-C-QCRNGAEC-HPATGECSCQPGFTGS 242 (823)
Q Consensus 177 C~~~g~C~~~~g~C~C~~Gy~--G~~C~~~C~~g~~g~~C~~~-~-~C~~~g~C-~~~~~~C~C~~G~~G~ 242 (823)
|...|......|+|.|.+||. +..|+. |++|||....... | +|..+..= ...++.|.|..||.-.
T Consensus 252 C~~dG~w~~p~G~C~C~~G~e~~~~~C~a-C~~g~~k~~~~~~~C~~CP~~S~s~~~Gs~~C~C~ng~~ra 321 (536)
T 3fl7_A 252 CAVDGEWLVPIGQCLCQAGYEKVEDACQA-CSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFFRA 321 (536)
T ss_dssp ECTTSCBCCCBCCCEECTTEEEETTEEEE-CCTTEECCSCCSSCCEECCSSEECCCTTCSSCEECTTCBCC
T ss_pred EcCCCCEecccCcEeccCccccCCceeee-cCCCCCcccCCCCccccCCCCCCCCCCCccEEEEecccccc
Confidence 666777765678999999998 667886 9999886543321 1 34444321 1225689999998643
No 139
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=43.54 E-value=4.1 Score=38.43 Aligned_cols=39 Identities=23% Similarity=0.623 Sum_probs=26.6
Q ss_pred CCCCCCCccccCCCCCccCCCCCCCC----CCCCCCeecCCC--CeeecCCCCC
Q psy6207 606 PGFKGHRCETQCSNPNTYGEDCSLDC----GCNNGGTCNQLD--GGCNCGRGYQ 653 (823)
Q Consensus 606 ~G~~G~~C~~~c~~~~~~~~~C~~~~----~C~~~g~C~~~~--~~C~C~~Gy~ 653 (823)
+||.+...... +++|.... +|.+ .|+++. ++|.|++||+
T Consensus 113 ~Gf~~~~~~~d-------i~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~ 157 (170)
T 1szb_A 113 TGFEAFYAAED-------IDECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYV 157 (170)
T ss_dssp CEEEEEEEEEE-------CCTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEE
T ss_pred cCceeeeeccc-------cCcccCCCCCCCccCC--ccccCCCCEEEeCCCCcE
Confidence 67766654332 57887541 2765 798764 5999999998
No 140
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=41.69 E-value=12 Score=47.35 Aligned_cols=35 Identities=31% Similarity=0.863 Sum_probs=29.8
Q ss_pred CCCCCCCCCCCCCeeeCC--CcEEeCC-CCCcCCCcccc
Q psy6207 536 QNCTQECRCMNGAACNPQ--DGTCLCP-AGYYGPLCQKR 571 (823)
Q Consensus 536 ~~C~~~c~C~~~g~C~~~--~~~C~C~-~G~~G~~C~~~ 571 (823)
+.|..+ ||.++|+|... .++|.|+ +||+|..|++.
T Consensus 1018 ~~C~~~-pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~ 1055 (1245)
T 3qcw_A 1018 TTCQED-SCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 1055 (1245)
T ss_dssp CCCCTT-SSSSSCEEEEETTEEEEECTTSSCBSTTSCBC
T ss_pred CceECC-cCCCCCEeCCCCCCCEEECCCCCCCCCCccCC
Confidence 567777 99999999864 5799999 69999999864
No 141
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=40.10 E-value=8.6 Score=43.60 Aligned_cols=37 Identities=30% Similarity=0.725 Sum_probs=28.1
Q ss_pred CCCCCCeecCCCCeeecCCCCC--CCCCCCCCCCCCcCCc
Q psy6207 632 GCNNGGTCNQLDGGCNCGRGYQ--GKLCTAPCPEGQYGYN 669 (823)
Q Consensus 632 ~C~~~g~C~~~~~~C~C~~Gy~--G~~C~~~c~~g~~g~~ 669 (823)
-|...|......|+|.|.+||. +..|+. |++|+|...
T Consensus 251 ~C~~dG~w~~p~G~C~C~~G~e~~~~~C~a-C~~g~~k~~ 289 (536)
T 3fl7_A 251 HCAVDGEWLVPIGQCLCQAGYEKVEDACQA-CSPGFFKFE 289 (536)
T ss_dssp EECTTSCBCCCBCCCEECTTEEEETTEEEE-CCTTEECCS
T ss_pred EEcCCCCEecccCcEeccCccccCCceeee-cCCCCCccc
Confidence 3666677766678999999997 566765 888887554
No 142
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=39.60 E-value=15 Score=40.00 Aligned_cols=33 Identities=3% Similarity=-0.147 Sum_probs=27.4
Q ss_pred ccccccCceeeeeeeeceeeecccceeEeecccceeeecC-CeeecccCcc
Q psy6207 692 KVHMGINARRYVNVRMVATFNTTLYLYLFVNLTYGILYKT-LVRLRECEER 741 (823)
Q Consensus 692 ~~~c~~~g~~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~~-G~~g~~C~~~ 741 (823)
..+|.++| +|.+....|. |.|+. ||+|..|++.
T Consensus 190 ~~pC~n~g----------~C~~~~~~~~-------C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 190 EDSCSNQG----------VCLQQWDGFS-------CDCSMTSFSGPLCNDP 223 (410)
T ss_dssp TTSSSTTC----------EEEECSSSEE-------EECTTTSEESTTSCEE
T ss_pred cccCCCCC----------EecCCCCCce-------EeccCCcccCCCCCCC
Confidence 45677999 9998777777 99996 9999999864
No 143
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=38.75 E-value=6.8 Score=41.96 Aligned_cols=30 Identities=30% Similarity=0.904 Sum_probs=25.1
Q ss_pred cCCCCCC-CCceeCCCCeeecCCCCcCCC--CCC
Q psy6207 5 PVCTDEC-IRGTCIAPNTCKCEVGFGGPT--CNI 35 (823)
Q Consensus 5 p~C~~~C-~~G~C~~~~~C~C~~G~~G~~--C~~ 35 (823)
+.||+.| .||.|++ .+|.|.+||+|.. |..
T Consensus 192 ~~Cp~~CsGhG~C~~-g~C~Cd~G~~g~d~~C~~ 224 (387)
T 2ddu_A 192 EPCPSYCSGHGDCIS-GVCFCDLGYTAAQGTCVS 224 (387)
T ss_dssp SCCGGGGGGSEEEET-TEEEECTTEEEETTEEEE
T ss_pred ccCccccCCCceecC-CeEEecCCcccCCCcccc
Confidence 4588999 5899988 8999999999974 543
No 144
>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*
Probab=35.49 E-value=7.8 Score=28.82 Aligned_cols=30 Identities=17% Similarity=0.370 Sum_probs=19.3
Q ss_pred eeec--C-CCeEecCCCCCCCCccccCCCCCccCCCC
Q psy6207 594 GCDI--V-TGKCICRPGFKGHRCETQCSNPNTYGEDC 627 (823)
Q Consensus 594 ~C~~--~-~~~C~C~~G~~G~~C~~~c~~~~~~~~~C 627 (823)
.|++ + +|+|.|++||....-.+.|.+ ++||
T Consensus 12 ~C~n~~ggs~~C~C~~Gy~L~~Dg~tC~d----~dec 44 (53)
T 2bz6_L 12 YCSDHTGTKRSCRCHEGYSLLADGVSCTP----TVEY 44 (53)
T ss_dssp EEEEETTTEEEEECCTTEEECTTSSCEEE----CSSS
T ss_pred EeEcCCCCCEEeeCCCCCEECCCCCcccC----Cccc
Confidence 4543 4 589999999985433344444 5666
No 145
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=31.97 E-value=19 Score=33.66 Aligned_cols=20 Identities=10% Similarity=-0.036 Sum_probs=17.1
Q ss_pred eeecccceeEeecccceeeecCCeeec
Q psy6207 710 TFNTTLYLYLFVNLTYGILYKTLVRLR 736 (823)
Q Consensus 710 ~C~~~~g~~~~~~~~~~C~C~~G~~g~ 736 (823)
.|.++.|+|. |+|++||+..
T Consensus 140 ~C~n~~g~~~-------C~C~~Gy~l~ 159 (170)
T 1szb_A 140 HCHNHLGGFY-------CSCRAGYVLH 159 (170)
T ss_dssp EEEEETTEEE-------EECCTTEEEC
T ss_pred ccccCCCCEE-------EeCCCCcEEC
Confidence 7888888888 9999999954
No 146
>1cmr_A Charybdotoxin, alpha chimera; antagonist of nicotinic acetylcholine receptor, curaremimetic protein; NMR {Synthetic} SCOP: g.3.7.2
Probab=23.25 E-value=54 Score=21.50 Aligned_cols=23 Identities=39% Similarity=0.852 Sum_probs=17.4
Q ss_pred ccccCCCCC--CCCceeCCCCeeecC
Q psy6207 2 ECVPVCTDE--CIRGTCIAPNTCKCE 25 (823)
Q Consensus 2 ~c~p~C~~~--C~~G~C~~~~~C~C~ 25 (823)
+|.++|... ..+|.|+| ..|.|-
T Consensus 6 ~C~~~Ck~~~g~~~gKC~N-gkC~Cy 30 (31)
T 1cmr_A 6 ECWSVCQRLHNTSKGWCDH-RGCICE 30 (31)
T ss_dssp GSSSSSTTTSSCCCCCEET-TEECCC
T ss_pred HHHHHHHHHhCCCCCceeC-CCceeC
Confidence 478888654 78899999 678773
No 147
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=20.25 E-value=50 Score=41.56 Aligned_cols=36 Identities=6% Similarity=-0.119 Sum_probs=29.2
Q ss_pred cccccccccCceeeeeeeeceeeecccceeEeecccceeeec-CCeeecccCcc
Q psy6207 689 HALKVHMGINARRYVNVRMVATFNTTLYLYLFVNLTYGILYK-TLVRLRECEER 741 (823)
Q Consensus 689 ~~~~~~c~~~g~~~~~~~~~~~C~~~~g~~~~~~~~~~C~C~-~G~~g~~C~~~ 741 (823)
.+...+|.++| +|......|. |.|+ +||+|..|++.
T Consensus 1019 ~C~~~pC~ngG----------~C~~~~~~~~-------C~C~~~g~~G~~C~~~ 1055 (1245)
T 3qcw_A 1019 TCQEDSCSNQG----------VCLQQWDGFS-------CDCSMTSFSGPLCNDP 1055 (1245)
T ss_dssp CCCTTSSSSSC----------EEEEETTEEE-------EECTTSSCBSTTSCBC
T ss_pred ceECCcCCCCC----------EeCCCCCCCE-------EECCCCCCCCCCccCC
Confidence 34567888999 9988777777 9999 69999999864
No 148
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=20.00 E-value=37 Score=35.71 Aligned_cols=39 Identities=26% Similarity=0.763 Sum_probs=33.1
Q ss_pred CCCCCCCCcccCCCC--cccCCCCccCCCCCccCCCCCCcCCC
Q psy6207 73 CSCPVESMECSRIDG--NCSCPPGFRGAKCKERTCPDGLYGEG 113 (823)
Q Consensus 73 C~C~~~~~~C~~~~~--~C~C~~G~~G~~C~~~~C~~~~~g~~ 113 (823)
|.|.+++..|....+ .|.|+...+|..|+ .|.++|++..
T Consensus 270 C~CnGHA~~C~~~~g~~~C~C~HnT~G~~Ce--~C~p~y~~~p 310 (338)
T 3tbd_A 270 CKCNLHANLCSMREGSLQCECEHNTTGPDCG--KCKKNFRTRS 310 (338)
T ss_dssp ECCTTBCSCEEEETTEEEECCCTTEESTTSC--EECTTCBSSC
T ss_pred ccccCCcCccCCCCCCceecCCCCCCCCCCc--ccCccccCCC
Confidence 689999878986555 69999999999999 9999988754
Done!