BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6208
(197 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6GL04|TERA_XENTR Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis
GN=vcp PE=2 SV=1
Length = 805
Score = 360 bits (924), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 171/192 (89%), Positives = 184/192 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGGCRKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI 303
Query: 186 DELDAIAPKREK 197
DELDAIAPKREK
Sbjct: 304 DELDAIAPKREK 315
Score = 117 bits (294), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E+V+ P+ HP F G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
>sp|P23787|TERA_XENLA Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp
PE=1 SV=3
Length = 805
Score = 359 bits (922), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 171/192 (89%), Positives = 184/192 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGGCRKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI 303
Query: 186 DELDAIAPKREK 197
DELDAIAPKREK
Sbjct: 304 DELDAIAPKREK 315
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E+V+ P+ HP F G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
>sp|Q3ZBT1|TERA_BOVIN Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=2
SV=1
Length = 806
Score = 359 bits (922), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 171/192 (89%), Positives = 184/192 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGGCRKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI 303
Query: 186 DELDAIAPKREK 197
DELDAIAPKREK
Sbjct: 304 DELDAIAPKREK 315
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E+V+ P+ HP F G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
>sp|P46462|TERA_RAT Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus
GN=Vcp PE=1 SV=3
Length = 806
Score = 359 bits (922), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 171/192 (89%), Positives = 184/192 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGGCRKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI 303
Query: 186 DELDAIAPKREK 197
DELDAIAPKREK
Sbjct: 304 DELDAIAPKREK 315
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E+V+ P+ HP F G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
>sp|Q01853|TERA_MOUSE Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp
PE=1 SV=4
Length = 806
Score = 359 bits (922), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 171/192 (89%), Positives = 184/192 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGGCRKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI 303
Query: 186 DELDAIAPKREK 197
DELDAIAPKREK
Sbjct: 304 DELDAIAPKREK 315
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E+V+ P+ HP F G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
>sp|P55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP
PE=1 SV=4
Length = 806
Score = 359 bits (922), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 171/192 (89%), Positives = 184/192 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGGCRKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI 303
Query: 186 DELDAIAPKREK 197
DELDAIAPKREK
Sbjct: 304 DELDAIAPKREK 315
Score = 117 bits (294), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E+V+ P+ HP F G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
>sp|P03974|TERA_PIG Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1
SV=5
Length = 806
Score = 359 bits (922), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 171/192 (89%), Positives = 184/192 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGGCRKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI 303
Query: 186 DELDAIAPKREK 197
DELDAIAPKREK
Sbjct: 304 DELDAIAPKREK 315
Score = 116 bits (291), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++++V+ P+ HP F G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 474 VTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
>sp|Q7ZU99|TERA_DANRE Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp
PE=1 SV=1
Length = 806
Score = 356 bits (913), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 170/192 (88%), Positives = 183/192 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGG RKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI 303
Query: 186 DELDAIAPKREK 197
DELDAIAPKREK
Sbjct: 304 DELDAIAPKREK 315
Score = 116 bits (291), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E N + ++DIGG +++E+V+ P+ HP F G+ P +G+L YGPPG G
Sbjct: 465 RETVVEVPN-ITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCG 523
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Query: 193 PKR 195
R
Sbjct: 584 KAR 586
>sp|Q7KN62|TERA_DROME Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila
melanogaster GN=TER94 PE=1 SV=1
Length = 801
Score = 347 bits (891), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 166/192 (86%), Positives = 178/192 (92%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFE+YLKPYFLEAYRP+H D FIVR MR +EFK+V TDP PYCIVA +TVI
Sbjct: 121 EGVTGNLFEIYLKPYFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVIF 180
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
C+GDPIKREEEEE+ NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGIL+
Sbjct: 181 CDGDPIKREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILM 240
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KNSP+IIFI
Sbjct: 241 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFI 300
Query: 186 DELDAIAPKREK 197
DE+DAIAPKR+K
Sbjct: 301 DEIDAIAPKRDK 312
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E N + DIGG +++E+V+ P+ HP F G++P RG+L YGPPG G
Sbjct: 462 RETVVEVPNTT-WTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCG 520
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A+A+ANE A F + GPE+++ GESE+N+R F++A +P ++F DELD+IA
Sbjct: 521 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIA 580
Query: 193 PKR 195
R
Sbjct: 581 KAR 583
>sp|P54811|TERA1_CAEEL Transitional endoplasmic reticulum ATPase homolog 1
OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1
Length = 809
Score = 328 bits (842), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 152/192 (79%), Positives = 175/192 (91%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLF+V+LKPYFLEAYRP+HK D+F V+ MR VEFK+V+T+PAP CIV+ DT+IH
Sbjct: 130 EGLTGNLFDVFLKPYFLEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPACIVSPDTMIH 189
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
EGDPIKREEEEE+ N +GYDD+GG RKQLAQIKEMVELPLRHP LFKAIG+KPPRGILL
Sbjct: 190 YEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILL 249
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
+GPPGTGKTLIARAVANETG+FFFLINGPE+MSK++GESESNLRKAFEE +KN P+I+FI
Sbjct: 250 FGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFI 309
Query: 186 DELDAIAPKREK 197
DE+DAIAPKREK
Sbjct: 310 DEIDAIAPKREK 321
Score = 114 bits (284), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 79/119 (66%), Gaps = 1/119 (0%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E N + DIGG + +++E+V+ P+ HP + G++P RG+L YGPPG G
Sbjct: 471 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 529
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAI 191
KTL+A+A+ANE A F I GPE+++ GESE+N+R F++A +P ++F DELD+I
Sbjct: 530 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSI 588
>sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3
Length = 835
Score = 327 bits (839), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 149/192 (77%), Positives = 173/192 (90%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLF+V+LKPYF+EAYRPV K D F+VRGGMR VEFK+VD +P Y +VA DT+IH
Sbjct: 134 EGITGNLFDVFLKPYFVEAYRPVRKGDHFVVRGGMRQVEFKVVDVEPEEYAVVAQDTIIH 193
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
EG+PI RE+EE N VGYDDIGGCRKQ+AQI+EMVELPLRHP LFKAIG+KPPRG+L+
Sbjct: 194 WEGEPINREDEENNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLM 253
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTL+ARAVANETGAFFFLINGPE+MSK+AGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 254 YGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFI 313
Query: 186 DELDAIAPKREK 197
DE+D+IAPKR+K
Sbjct: 314 DEIDSIAPKRDK 325
Score = 124 bits (311), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 84/123 (68%), Gaps = 1/123 (0%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E+ N V +DD+GG + ++KE VE P+ HP + G+ P +G+L YGPPGTG
Sbjct: 475 RETVVESVN-VTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTG 533
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A+AVA E A F + GPE++S GESESN+R F++A +P+++F+DELD+IA
Sbjct: 534 KTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIA 593
Query: 193 PKR 195
R
Sbjct: 594 KAR 596
>sp|P54609|CD48A_ARATH Cell division control protein 48 homolog A OS=Arabidopsis thaliana
GN=CDC48A PE=1 SV=1
Length = 809
Score = 325 bits (833), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 153/192 (79%), Positives = 175/192 (91%), Gaps = 1/192 (0%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLF+ YLKPYFLEAYRPV K DLF+VRGGMR+VEFK+++TDPA YC+VA DT I
Sbjct: 128 EGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIF 187
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+P+KRE+EE + VGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+GILL
Sbjct: 188 CEGEPVKREDEERLDD-VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILL 246
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEA+KN+PSIIFI
Sbjct: 247 YGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFI 306
Query: 186 DELDAIAPKREK 197
DE+D+IAPKREK
Sbjct: 307 DEIDSIAPKREK 318
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 81/113 (71%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E V+ P+ HP F+ G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 477 VSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 536
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F + GPE+++ GESE+N+R+ F++A +++P ++F DELD+IA +R
Sbjct: 537 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR 589
>sp|Q9LZF6|CD48E_ARATH Cell division control protein 48 homolog E OS=Arabidopsis thaliana
GN=CDC48E PE=1 SV=2
Length = 810
Score = 325 bits (833), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 153/192 (79%), Positives = 175/192 (91%), Gaps = 1/192 (0%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLF+ YLKPYFLEAYRPV K DLF+VRGGMR+VEFK+++TDPA YC+VA DT I
Sbjct: 128 EGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIF 187
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+P+KRE+EE + VGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+GILL
Sbjct: 188 CEGEPVKREDEERL-DEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILL 246
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEA+KN+PSIIFI
Sbjct: 247 YGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFI 306
Query: 186 DELDAIAPKREK 197
DE+D+IAPKREK
Sbjct: 307 DEIDSIAPKREK 318
Score = 120 bits (301), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 81/113 (71%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E V+ P+ HP F+ G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 477 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 536
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F + GPE+++ GESE+N+R+ F++A +++P ++F DELD+IA +R
Sbjct: 537 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR 589
>sp|P54812|TERA2_CAEEL Transitional endoplasmic reticulum ATPase homolog 2
OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2
Length = 810
Score = 322 bits (826), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 158/192 (82%), Positives = 174/192 (90%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLF+V+L+PYF +AYRPVHK D+F V+ MR VEFK+V+TDPAP CIVA DTVIH
Sbjct: 129 EGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIH 188
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
EGDPIKREEEEEA N VGYDD+GG RKQLAQIKEMVELPLRHP LFKAIGVKPPRGILL
Sbjct: 189 YEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILL 248
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
+GPPGTGKTLIARAVANETGAFFFLINGPEIMSK++GESESNLRKAF E +KNSP+I+FI
Sbjct: 249 FGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFI 308
Query: 186 DELDAIAPKREK 197
DE+DAIAPKREK
Sbjct: 309 DEIDAIAPKREK 320
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 55/123 (44%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E N + DIGG + +++E+V+ P+ HP + G++P RG+L YGPPG G
Sbjct: 470 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 528
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A+A+ANE A F I GPE+++ GESE+N+R F++A +P ++F DELD+IA
Sbjct: 529 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIA 588
Query: 193 PKR 195
R
Sbjct: 589 KAR 591
>sp|Q9SCN8|CD48D_ARATH Cell division control protein 48 homolog D OS=Arabidopsis thaliana
GN=CDC48D PE=1 SV=1
Length = 815
Score = 322 bits (826), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 152/192 (79%), Positives = 175/192 (91%), Gaps = 1/192 (0%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG N+F+ YLKPYFLEAYRPV K DLF+VRGGMR++EFK+++TDPA YC+VA DT I
Sbjct: 129 EGVSGNIFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSIEFKVIETDPAEYCVVAPDTEIF 188
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EE + VGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+GILL
Sbjct: 189 CEGEPIKREDEERL-DEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILL 247
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEA+KN+PSIIFI
Sbjct: 248 YGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFI 307
Query: 186 DELDAIAPKREK 197
DE+D+IAPKREK
Sbjct: 308 DEIDSIAPKREK 319
Score = 120 bits (301), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 81/113 (71%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E V+ P+ HP F+ G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A +++P ++F DELD+IA +R
Sbjct: 538 ECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR 590
>sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2
SV=1
Length = 807
Score = 322 bits (824), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 152/192 (79%), Positives = 174/192 (90%), Gaps = 1/192 (0%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLF+ +LKPYFLEAYRPV K DLF+VRGGMR+VEFK+V+TDP YC+VA DT I
Sbjct: 129 EGVTGNLFDAFLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVVETDPGEYCVVAPDTEIF 188
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+P+KRE+EE + VGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+GILL
Sbjct: 189 CEGEPLKREDEERL-DEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILL 247
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEA+KN+PSIIFI
Sbjct: 248 YGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFI 307
Query: 186 DELDAIAPKREK 197
DE+D+IAPKREK
Sbjct: 308 DEIDSIAPKREK 319
Score = 120 bits (301), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 81/113 (71%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E V+ P+ HP F+ G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F + GPE+++ GESE+N+R+ F++A +++P ++F DELD+IA +R
Sbjct: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR 590
>sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc48 PE=1 SV=2
Length = 815
Score = 320 bits (821), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 147/192 (76%), Positives = 172/192 (89%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG +LF+VYLKPYF+EAYRP+ K DLF+VRG MR VEFK+VD P + IV+ DT+IH
Sbjct: 144 EGLTGSLFDVYLKPYFVEAYRPIRKGDLFVVRGSMRQVEFKVVDVAPDEFGIVSQDTIIH 203
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
EG+PI RE+EE + VGYDDIGGCR+Q+AQI+E+VELPLRHP LFK+IG+KPPRGIL+
Sbjct: 204 WEGEPINREDEESSLAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILM 263
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTL+ARAVANETGAFFFLINGPEIMSK+AGESESNLRKAFEEA+KNSP+IIFI
Sbjct: 264 YGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFI 323
Query: 186 DELDAIAPKREK 197
DE+D+IAPKREK
Sbjct: 324 DEIDSIAPKREK 335
Score = 116 bits (291), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG + +++E V++P+ + F GV P +G+L +GPPGTGKTL+A+A+AN
Sbjct: 494 VRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIAN 553
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F + GPE++S GESESN+R F++A +P ++F+DELD+IA R
Sbjct: 554 ECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKAR 606
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=cdc48 PE=1 SV=2
Length = 823
Score = 319 bits (817), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 148/192 (77%), Positives = 171/192 (89%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG +LF+VYL PYF + YRPV + DLF VRGGMR VEFK+V+ DP + IVA DT+IH
Sbjct: 145 EGLTGSLFDVYLAPYFRDGYRPVKQGDLFTVRGGMRQVEFKVVEVDPPEFGIVAPDTIIH 204
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
EG+PI+RE+EE N VGYDDIGGCRKQ+AQI+E+VELPLRHP LFK+IG+KPPRGIL+
Sbjct: 205 SEGEPIQREDEENNLNEVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILM 264
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTL+ARAVANETGAFFFLINGPEIMSK+AGESESNLRKAFEEA+KNSP+IIFI
Sbjct: 265 YGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFI 324
Query: 186 DELDAIAPKREK 197
DE+D+IAPKREK
Sbjct: 325 DEIDSIAPKREK 336
Score = 122 bits (305), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG + ++ E V+ P+ HP F+ G+ P RG+L YGPPGTGKT++A+AVAN
Sbjct: 496 VRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVAN 555
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F + GPE++S GESESN+R F++A +P ++F+DELD+IA R
Sbjct: 556 ECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSR 608
>sp|Q96372|CDC48_CAPAN Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP
PE=2 SV=1
Length = 805
Score = 316 bits (809), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 148/192 (77%), Positives = 173/192 (90%), Gaps = 1/192 (0%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG +LF+ +LKPYFLEAYRP+ K D F+VRGGMR+VEFK+++TDP YC+VA DT I
Sbjct: 129 EGLTGDLFDAFLKPYFLEAYRPLRKGDNFLVRGGMRSVEFKVIETDPGEYCVVAPDTEIF 188
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+P+KRE+EE + VGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+GILL
Sbjct: 189 CEGEPVKREDEERL-DEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILL 247
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEA+KN+PSIIFI
Sbjct: 248 YGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFI 307
Query: 186 DELDAIAPKREK 197
DE+D+IAPKREK
Sbjct: 308 DEIDSIAPKREK 319
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 80/113 (70%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E V+ P+ P F+ G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 478 VSWEDIGGLENVKRELQETVQYPVEPPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIAN 537
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F + GPE+++ GESE+N+R+ F++A +++P ++F DELD+IA +R
Sbjct: 538 ECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQR 590
>sp|Q8SSJ5|CDC48_ENCCU Cell division control protein 48 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CDC48 PE=1 SV=1
Length = 780
Score = 238 bits (607), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/192 (60%), Positives = 148/192 (77%), Gaps = 6/192 (3%)
Query: 11 NLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAP-----YCIVAADTVIH 65
N+F+ +++P+ + P+ ++ V G+ VEFK+ A + V + T ++
Sbjct: 129 NIFDEFVRPFLDFNFMPLTTGSIYGVTSGLGRVEFKVTKMIDAQDMEIKHGSVTSTTSVY 188
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
C+ + I REE E+ N VGYDD+GGCR Q+A+I+E+VELPLRH L+ IGVKPP+GILL
Sbjct: 189 CD-ETISREEVEKEFNMVGYDDVGGCRAQMAKIRELVELPLRHSQLYSKIGVKPPKGILL 247
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARA+ANETGAF FLINGPEIMSK+AGESESNLRKAFEEA+KNSP+IIFI
Sbjct: 248 YGPPGTGKTLIARAIANETGAFLFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFI 307
Query: 186 DELDAIAPKREK 197
DE+DA+APKREK
Sbjct: 308 DEIDALAPKREK 319
Score = 113 bits (283), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/127 (44%), Positives = 77/127 (60%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP E S V + DIGG + +++E V+ P+ +P F G+ P +G+L YGP
Sbjct: 464 DPSSLRETVIQSPNVKWSDIGGLEQVKQELRETVQYPVEYPEKFIKFGMTPAKGVLFYGP 523
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PG GKTL+A+AVA E A F I GPE++S GESESN+R F A +P ++F DE+
Sbjct: 524 PGCGKTLLAKAVATECKANFISIKGPELLSMWVGESESNIRDLFARARGAAPCVLFFDEI 583
Query: 189 DAIAPKR 195
D+IA R
Sbjct: 584 DSIAKAR 590
>sp|Q58556|Y1156_METJA Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1
Length = 903
Score = 182 bits (462), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/156 (55%), Positives = 122/156 (78%), Gaps = 1/156 (0%)
Query: 42 AVEFKIVDTDPAPYCIVAADTVIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEM 101
A+ F +V T PA V T + + +P+ +E + + V Y+DIGG ++++ +++EM
Sbjct: 136 ALTFVVVSTTPAGPVRVTDFTHVELKEEPVSEIKETKVPD-VTYEDIGGLKEEVKKVREM 194
Query: 102 VELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLA 161
+ELP+RHP LF+ +G++PP+G+LL GPPGTGKTL+A+AVANE GA F++INGPEIMSK
Sbjct: 195 IELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYV 254
Query: 162 GESESNLRKAFEEADKNSPSIIFIDELDAIAPKREK 197
GE+E NLRK FEEA++N+PSIIFIDE+DAIAPKR++
Sbjct: 255 GETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDE 290
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 87/113 (76%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG + +++E VE PL+ +F+ IGV+PP+G+LL+GPPGTGKTL+A+AVAN
Sbjct: 449 VKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVAN 508
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E+GA F + GPEI SK GESE +R+ F +A +++P IIF DE+DAIAPKR
Sbjct: 509 ESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKR 561
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3
SV=2
Length = 780
Score = 181 bits (460), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 126/186 (67%), Gaps = 4/186 (2%)
Query: 11 NLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIHCEGDP 70
N F Y+K ++ +P+ K + + +E +V+T P+ Y V T I +P
Sbjct: 141 NSFVEYVKDTLMD--KPLAKGETLPIPIYTGTLELTVVNTQPSNYVYVTGSTNIEIREEP 198
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E A V ++DIG + +I+E+VE P+RHP LF+ +G+ PP+GILLYGPPG
Sbjct: 199 VK--ESSLAYPKVSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPG 256
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKTL+ARA+ANE GA+F +NGPEIMSK GESE +R+ F+EA++N+PSIIFIDE+DA
Sbjct: 257 TGKTLLARALANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDA 316
Query: 191 IAPKRE 196
IAPKRE
Sbjct: 317 IAPKRE 322
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 83/113 (73%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG Q++E VE PLR P LF GV PP+GILL+GPPGTGKT++A+AVA
Sbjct: 484 VNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVAT 543
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E+GA F + GPEI+SK GESE +R+ F +A + +P++IF DE+D+IAP R
Sbjct: 544 ESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIR 596
>sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_1297 PE=3 SV=1
Length = 733
Score = 177 bits (450), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 120/172 (69%), Gaps = 2/172 (1%)
Query: 26 RPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIHCEGDPIKREEEEEASNAVGY 85
RPV K V + F I T P+ +V +T I + P EE + A V Y
Sbjct: 124 RPVIKGQKIRVEVFGHTLTFVITATRPSGVVVVTRNTAIELKEKPA--EEVKRAVPDVTY 181
Query: 86 DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETG 145
+DIGG +++L ++EM+ELPL+HP LF+ +G++PP+G+LLYGPPGTGKTLIA+AVANE
Sbjct: 182 EDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVANEVD 241
Query: 146 AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKREK 197
A F I+GPEIMSK GESE LR+ FEEA +N+PSIIFIDE+D+IAPKRE+
Sbjct: 242 AHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREE 293
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 86/113 (76%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG ++ E VE PL++P +F+A +KPPRGILL+GPPGTGKTL+A+AVAN
Sbjct: 452 VKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVAN 511
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E+ A F + GPE++SK GESE ++R+ F +A + +P +IF DE+D++AP+R
Sbjct: 512 ESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRR 564
>sp|O05209|VAT_THEAC VCP-like ATPase OS=Thermoplasma acidophilum (strain ATCC 25905 /
DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=vat
PE=1 SV=1
Length = 745
Score = 176 bits (445), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 125/177 (70%), Gaps = 7/177 (3%)
Query: 26 RPVHKDDLFIVRG----GMRAVEFKIVDTDPAPYCI-VAADTVIHCEGDPIKREEEEEAS 80
RP+ + D V G G + FK+V T P+ + + +T I +P E EE S
Sbjct: 127 RPMLEQDNISVPGLTLAGQTGLLFKVVKTLPSKVPVEIGEETKIEIREEPAS-EVLEEVS 185
Query: 81 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAV 140
+ Y+DIGG +QL +I+EM+ELPL+HP LF+ +G+ PP+G++LYGPPGTGKTLIARAV
Sbjct: 186 R-ISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAV 244
Query: 141 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKREK 197
ANE+GA F INGPEIMSK G+SE LR+ F +A++ +PSIIFIDE+D+IAPKRE+
Sbjct: 245 ANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREE 301
Score = 134 bits (337), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 85/113 (75%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V +DDIGG +IKE VELPL P +FK +G++P +G LLYGPPG GKTL+A+AVA
Sbjct: 464 VHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVAT 523
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E+ A F I GPE++SK GESE +R+ F++A + +P+I+F+DE+D+IAP+R
Sbjct: 524 ESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRR 576
>sp|Q9HPF0|CDCH_HALSA Protein CdcH OS=Halobacterium salinarum (strain ATCC 700922 / JCM
11081 / NRC-1) GN=cdcH PE=3 SV=1
Length = 742
Score = 175 bits (444), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/161 (52%), Positives = 116/161 (72%), Gaps = 2/161 (1%)
Query: 36 VRGGMRAVEFKIVDTDPAPYCIVAADTVIHCEGDPIKREEEEEASNAVGYDDIGGCRKQL 95
+R +A+ V+T+P C+V DT + +PI E + Y+DIGG ++
Sbjct: 141 MRSPGQAIPLIAVETEPEGVCLVTEDTDVELREEPISGFER--TGGGITYEDIGGLENEI 198
Query: 96 AQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPE 155
+++EMVELP++HP +F+ +G++PP+G+LL+GPPGTGKTL+A+AVANET A FF I GPE
Sbjct: 199 QRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVANETSASFFSIAGPE 258
Query: 156 IMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKRE 196
I+SK GESE LR+ FE+A +SPSIIFIDELD+IAPKRE
Sbjct: 259 IISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKRE 299
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 82/113 (72%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
+ +DD+GG + +KE VE PL P F +GV+PP G+LLYGPPGTGKTL+A+AVAN
Sbjct: 459 ITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVAN 518
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
ET A F + GP+++SK GESE +R+ F +A + +P++IF DELD++AP R
Sbjct: 519 ETNANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVIFFDELDSLAPGR 571
>sp|P46468|CDAT_PLAF7 Putative cell division cycle ATPase OS=Plasmodium falciparum
(isolate 3D7) GN=PF07_0047 PE=3 SV=2
Length = 1229
Score = 166 bits (420), Expect = 1e-40, Method: Composition-based stats.
Identities = 79/199 (39%), Positives = 128/199 (64%), Gaps = 5/199 (2%)
Query: 4 VPEGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAP-----YCIV 58
+P L + + PY +Y+P+ + + +EFK++ + +
Sbjct: 440 IPNLSREELEKAVIHPYLKNSYKPLRVNSNIYIYYKNNKIEFKVLKIISEESENEEFGCI 499
Query: 59 AADTVIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVK 118
+ + + +KRE+ EE ++ + Y+D+GG +KQL +I+E++ELPL++P +F +IG+
Sbjct: 500 GEHSQLTLAEEYLKREDYEENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGIS 559
Query: 119 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKN 178
P+G+L++G PGTGKT IA+A+ANE+ A+ ++INGPEIMSK GESE LRK F++A +
Sbjct: 560 APKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEK 619
Query: 179 SPSIIFIDELDAIAPKREK 197
+P IIFIDE+D+IA KR K
Sbjct: 620 TPCIIFIDEIDSIANKRSK 638
Score = 110 bits (276), Expect = 5e-24, Method: Composition-based stats.
Identities = 54/127 (42%), Positives = 79/127 (62%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
+P E + V ++DIGG + Q+KE + PL + L+ +GILLYGP
Sbjct: 917 NPSSLRERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGP 976
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PG GKTL+A+A+ANE A F + GPE+++ GESE+N+R F++A SP IIF DE+
Sbjct: 977 PGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEI 1036
Query: 189 DAIAPKR 195
D++A +R
Sbjct: 1037 DSLAKER 1043
>sp|Q8NB90|SPAT5_HUMAN Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1
SV=3
Length = 893
Score = 159 bits (403), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 81/142 (57%), Positives = 100/142 (70%), Gaps = 2/142 (1%)
Query: 55 YCIVAADTVIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKA 114
Y I + V E D K +E++ V YD IGG QL I+E++ELPL+ P LFK+
Sbjct: 324 YFISSTTRVNFTEID--KNSKEQDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKS 381
Query: 115 IGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE 174
G+ PRG+LLYGPPGTGKT+IARAVANE GA+ +INGPEI+SK GE+E+ LR+ F E
Sbjct: 382 YGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEIISKFYGETEAKLRQIFAE 441
Query: 175 ADKNSPSIIFIDELDAIAPKRE 196
A PSIIFIDELDA+ PKRE
Sbjct: 442 ATLRHPSIIFIDELDALCPKRE 463
Score = 126 bits (316), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/113 (51%), Positives = 81/113 (71%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V + DIGG ++++ VE PL+HP F +G++PP+G+LLYGPPG KT+IA+A+AN
Sbjct: 624 VSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALAN 683
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E+G F I GPE+M+K GESE +R+ F +A +PSIIF DELDA+A +R
Sbjct: 684 ESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVER 736
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 157 bits (398), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/122 (61%), Positives = 94/122 (77%)
Query: 75 EEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKT 134
+E+++ V YD IGG QL I+E++ELPL+ P LFK+ G+ PRG+LLYGPPGTGKT
Sbjct: 342 KEQDSQFKVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKT 401
Query: 135 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPK 194
+IARAVANE GA+ +INGPEI+SK GE+E+ LR+ F EA PSIIFIDELDA+ PK
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 461
Query: 195 RE 196
RE
Sbjct: 462 RE 463
Score = 128 bits (321), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 81/113 (71%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V + DIGG ++K+ VE PL+HP F +G++PP+G+LLYGPPG KT+IA+A+AN
Sbjct: 624 VSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCSKTMIAKALAN 683
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E+G F I GPE+M+K GESE +R+ F +A +PSIIF DELDA+A +R
Sbjct: 684 ESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALAVER 736
>sp|O60058|AFG2_SCHPO ATPase family gene 2 protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=afg2 PE=3 SV=1
Length = 809
Score = 146 bits (369), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 67/115 (58%), Positives = 88/115 (76%)
Query: 81 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAV 140
+AV + IGG + Q+AQI+++VELP ++P LFK + PPRG+LLYGPPGTGKT++ RAV
Sbjct: 274 SAVTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAV 333
Query: 141 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A E A F I+GP ++ K GE+ES LRK FE+A + PSIIFIDE+DA+APKR
Sbjct: 334 AAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKR 388
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/113 (48%), Positives = 76/113 (67%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V + DIGG + ++KE VE PL H F +GV+PP+G+LLYGPPG KT+ A+A+A
Sbjct: 545 VHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIAT 604
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
ETG F + GPE+ K GESE +R+ F++A + SPS+IF DE+DA+ R
Sbjct: 605 ETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANR 657
>sp|Q58576|PAN_METJA Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=pan PE=1 SV=1
Length = 430
Score = 142 bits (357), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/113 (58%), Positives = 88/113 (77%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V Y+DIGG KQ+ +I+E+VELPL+HP LF+ +G++PP+GILLYGPPGTGKTL+A+AVA
Sbjct: 167 VRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVAT 226
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
ET A F + G E++ K GE S ++ F+ A + +PSIIFIDE+DAIA KR
Sbjct: 227 ETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKR 279
>sp|O26824|PAN_METTH Proteasome-activating nucleotidase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pan PE=3 SV=1
Length = 410
Score = 138 bits (347), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/135 (52%), Positives = 92/135 (68%)
Query: 63 VIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRG 122
V+ E DP+ E E V Y+ IGG +Q+ ++KE VELPL+ P LF+ IG++PP+G
Sbjct: 128 VLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKG 187
Query: 123 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSI 182
+LLYGPPGTGKTL+A+AVA+ET A F I E + K GE +R FE A + SPSI
Sbjct: 188 VLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSI 247
Query: 183 IFIDELDAIAPKREK 197
IFIDE+DA+A KR K
Sbjct: 248 IFIDEIDAVAAKRLK 262
>sp|P40327|PRS4_YEAST 26S protease regulatory subunit 4 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT2 PE=1
SV=3
Length = 437
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 91/133 (68%)
Query: 63 VIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRG 122
V+ + DP+ + + S Y DIGG Q+ +IKE VELPL HP L++ +G+KPP+G
Sbjct: 159 VLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKG 218
Query: 123 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSI 182
++LYG PGTGKTL+A+AVAN+T A F I G E++ K G+ R+ F+ A +N+PSI
Sbjct: 219 VILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSI 278
Query: 183 IFIDELDAIAPKR 195
+FIDE+DAI KR
Sbjct: 279 VFIDEIDAIGTKR 291
>sp|P32794|AFG2_YEAST ATPase family gene 2 protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AFG2 PE=1 SV=1
Length = 780
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 62/113 (54%), Positives = 80/113 (70%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
+ Y +GG K++ +K +E+PL P+LF + GV PPRGILL+GPPGTGKT++ R VAN
Sbjct: 242 LSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVAN 301
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+ A INGP I+SK GE+E+ LR F EA K PSIIFIDE+D+IAP R
Sbjct: 302 TSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNR 354
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 77/114 (67%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V + DIGG + ++KEM++LPL F +G+ P+G+LLYGPPG KTL A+A+A
Sbjct: 513 VYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALAT 572
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKRE 196
E+G F + GPEI +K GESE +R+ F +A +PSIIF DE+DA++P R+
Sbjct: 573 ESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRD 626
>sp|Q9SEI4|PRS6B_ARATH 26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana
GN=RPT3 PE=1 SV=1
Length = 408
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 80/113 (70%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V Y+DIGGC Q +I+E VELPL H L+K IG+ PPRG+LLYGPPGTGKT++A+AVAN
Sbjct: 152 VSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAN 211
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
T A F + G E + K GE +R F A +N+P+IIFIDE+DAIA R
Sbjct: 212 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATAR 264
>sp|P85200|PRS6B_HELAN 26S protease regulatory subunit 6B homolog OS=Helianthus annuus
PE=1 SV=1
Length = 414
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 80/113 (70%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V Y+DIGGC Q +I+E VELPL H L+K IG+ PPRG+LLYGPPGTGKT++A+AVAN
Sbjct: 158 VTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAN 217
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
T A F + G E + K GE +R F A +N+P+IIFIDE+DAIA R
Sbjct: 218 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATAR 270
>sp|O28303|PAN_ARCFU Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=pan PE=1 SV=1
Length = 398
Score = 135 bits (339), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 92/138 (66%)
Query: 58 VAADTVIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGV 117
+A V+ DP+ E E V Y+DIGG Q+ +I+E VELPL P LF +G+
Sbjct: 113 LAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGI 172
Query: 118 KPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADK 177
+PP+G+LLYGPPGTGKTL+A+AVAN+T A F + G E + K GE +R+ F+ A +
Sbjct: 173 EPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAKE 232
Query: 178 NSPSIIFIDELDAIAPKR 195
+PSIIFIDELDAIA +R
Sbjct: 233 KAPSIIFIDELDAIAARR 250
>sp|D4GUJ7|PAN1_HALVD Proteasome-activating nucleotidase 1 OS=Haloferax volcanii (strain
ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB
2012 / VKM B-1768 / DS2) GN=pan1 PE=2 SV=2
Length = 406
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/118 (51%), Positives = 84/118 (71%)
Query: 78 EASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIA 137
E S V Y+DIGG +Q+ +++E VE+PL P +F +G+ PP G+LLYGPPGTGKT++A
Sbjct: 142 EHSPDVTYEDIGGLEEQMQEVRETVEMPLDRPEMFAEVGIDPPSGVLLYGPPGTGKTMLA 201
Query: 138 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+AVAN+T A F + G E++ K GE +R FE A +N P++IFIDE+DAIA KR
Sbjct: 202 KAVANQTNASFIKMAGSELVHKFIGEGAKLVRDLFEVARENEPAVIFIDEIDAIASKR 259
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 134 bits (338), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 87/120 (72%)
Query: 76 EEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTL 135
E + S V YDDIGG +Q+ +I+E+VE PL+ P LF+ +GV+PP+G+LLYGPPGTGKTL
Sbjct: 169 EVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTL 228
Query: 136 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+A+AVAN A F + PE++ K GE +R+ FE A + +PSIIFIDE+DAI +R
Sbjct: 229 LAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARR 288
>sp|C5A6P8|PAN_THEGJ Proteasome-activating nucleotidase OS=Thermococcus gammatolerans
(strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1
Length = 397
Score = 134 bits (336), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 83/113 (73%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V Y DIGG +QLA+++E VELPL+HP LF+ +G++PP+G+LLYGPPG GKTL+A+AVAN
Sbjct: 135 VTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKAVAN 194
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A F + G E++ K GE + + FE A + +P+IIFIDE+DAI KR
Sbjct: 195 HVNATFIRVVGSELVRKFIGEGARLVHELFEMAKEKAPTIIFIDEIDAIGAKR 247
>sp|Q55BV5|PRS4_DICDI 26S protease regulatory subunit 4 homolog OS=Dictyostelium
discoideum GN=psmC1 PE=1 SV=1
Length = 439
Score = 133 bits (335), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 64/133 (48%), Positives = 91/133 (68%)
Query: 63 VIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRG 122
VI E DP+ + E + Y DIGG Q+ ++KE +ELPL HP L++ IG+KPP+G
Sbjct: 161 VIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKG 220
Query: 123 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSI 182
++LYG PGTGKTL+A+AVAN+T A F + G E++ K G+ +R+ F AD+ +PSI
Sbjct: 221 VILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSI 280
Query: 183 IFIDELDAIAPKR 195
+FIDE+DA+ KR
Sbjct: 281 VFIDEIDAVGTKR 293
>sp|P62193|PRS4_RAT 26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1
PE=2 SV=1
Length = 440
Score = 133 bits (335), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 96/149 (64%), Gaps = 7/149 (4%)
Query: 54 PYCIVAADTVIHC-------EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPL 106
P C V + +H + DP+ + E + Y DIGG Q+ +IKE VELPL
Sbjct: 146 PGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPL 205
Query: 107 RHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 166
HP ++ +G+KPP+G++LYGPPGTGKTL+A+AVAN+T A F + G E++ K G+
Sbjct: 206 THPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPK 265
Query: 167 NLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+R+ F A++++PSI+FIDE+DAI KR
Sbjct: 266 LVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
>sp|P62192|PRS4_MOUSE 26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1
SV=1
Length = 440
Score = 133 bits (335), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 96/149 (64%), Gaps = 7/149 (4%)
Query: 54 PYCIVAADTVIHC-------EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPL 106
P C V + +H + DP+ + E + Y DIGG Q+ +IKE VELPL
Sbjct: 146 PGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPL 205
Query: 107 RHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 166
HP ++ +G+KPP+G++LYGPPGTGKTL+A+AVAN+T A F + G E++ K G+
Sbjct: 206 THPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPK 265
Query: 167 NLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+R+ F A++++PSI+FIDE+DAI KR
Sbjct: 266 LVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
>sp|P62191|PRS4_HUMAN 26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1
SV=1
Length = 440
Score = 133 bits (335), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 96/149 (64%), Gaps = 7/149 (4%)
Query: 54 PYCIVAADTVIHC-------EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPL 106
P C V + +H + DP+ + E + Y DIGG Q+ +IKE VELPL
Sbjct: 146 PGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPL 205
Query: 107 RHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 166
HP ++ +G+KPP+G++LYGPPGTGKTL+A+AVAN+T A F + G E++ K G+
Sbjct: 206 THPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPK 265
Query: 167 NLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+R+ F A++++PSI+FIDE+DAI KR
Sbjct: 266 LVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
>sp|Q5JHS5|PAN_PYRKO Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=pan PE=3
SV=1
Length = 397
Score = 133 bits (334), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/113 (53%), Positives = 83/113 (73%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V Y+DIGG KQL +++E +ELPL+HP LF+ +G++PP+G+LLYGPPG GKTL+A+AVAN
Sbjct: 135 VTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVAN 194
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A F + G E++ K GE + + FE A + +P+IIFIDE+DAI KR
Sbjct: 195 HVNATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKR 247
>sp|Q975U2|PAN_SULTO Proteasome-activating nucleotidase OS=Sulfolobus tokodaii (strain
DSM 16993 / JCM 10545 / NBRC 100140 / 7) GN=pan PE=3
SV=2
Length = 392
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 82/113 (72%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V Y DIGG +Q+ +I+E++ELPL++P LFK IG+ PP+G+LLYGPPGTGKTL+A+AVA
Sbjct: 131 VHYSDIGGLNEQINEIREVIELPLKNPELFKEIGIDPPKGVLLYGPPGTGKTLLAKAVAT 190
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E+ A F + E K GE +R+ FE A + +PSI+FIDE+DAI KR
Sbjct: 191 ESNATFIQVVASEFAQKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKR 243
>sp|P36612|PRS4_SCHPO 26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=mts2 PE=2 SV=1
Length = 448
Score = 132 bits (333), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 83/111 (74%)
Query: 85 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 144
Y DIGG Q+ +IKE VELPL HP L++ +G+KPP+G++LYG PGTGKTL+A+AVAN+T
Sbjct: 190 YADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 249
Query: 145 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A F + G E++ K G+ +R+ F A+++SPSI+FIDE+DAI KR
Sbjct: 250 SATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEIDAIGTKR 300
>sp|Q90732|PRS4_CHICK 26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2
SV=1
Length = 440
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 66/149 (44%), Positives = 95/149 (63%), Gaps = 7/149 (4%)
Query: 54 PYCIVAADTVIHC-------EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPL 106
P C V + +H + DP+ + E + Y DIGG Q+ +IKE VELPL
Sbjct: 146 PGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPL 205
Query: 107 RHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 166
HP ++ +G+KPP+G++LYGPPGTGKTL+A+AVAN+T A F + G E++ K G+
Sbjct: 206 THPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPK 265
Query: 167 NLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+R+ F A+++ PSI+FIDE+DAI KR
Sbjct: 266 LVRELFRVAEEHGPSIVFIDEIDAIGTKR 294
>sp|P48601|PRS4_DROME 26S protease regulatory subunit 4 OS=Drosophila melanogaster
GN=Pros26.4 PE=2 SV=2
Length = 439
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/159 (42%), Positives = 99/159 (62%), Gaps = 8/159 (5%)
Query: 45 FKIVDTDP-APYCIVAADTVIHC-------EGDPIKREEEEEASNAVGYDDIGGCRKQLA 96
VD D P C V + +H + DP+ + E + Y DIGG Q+
Sbjct: 135 LSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQ 194
Query: 97 QIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEI 156
+IKE VELPL HP ++ +G+KPP+G++LYGPPGTGKTL+A+AVAN+T A F + G E+
Sbjct: 195 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 254
Query: 157 MSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+ K G+ +R+ F A++++PSI+FIDE+DA+ KR
Sbjct: 255 IQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKR 293
>sp|P54778|PRS6B_SOLTU 26S protease regulatory subunit 6B homolog OS=Solanum tuberosum
PE=2 SV=1
Length = 413
Score = 132 bits (332), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 80/113 (70%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V Y+DIGGC Q +I+E VELPL H L+K IG+ PPRG+LLYGPPGTGKT++A+AVA+
Sbjct: 157 VTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAH 216
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
T A F + G E + K GE +R F A +N+P+IIFIDE+DAIA R
Sbjct: 217 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATAR 269
>sp|A6VHR1|PAN_METM7 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1
Length = 407
Score = 132 bits (331), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 61/113 (53%), Positives = 83/113 (73%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
+ ++DIGG Q+ IKE+VELPL++P LF+ +G+ PP+G+LLYGPPGTGKTL+A+AVA
Sbjct: 145 ISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAY 204
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
ET A F + G E++ K GE +R F+ A + SP IIFIDE+DA+A KR
Sbjct: 205 ETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAKEKSPCIIFIDEIDAVASKR 257
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.140 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,705,868
Number of Sequences: 539616
Number of extensions: 3465921
Number of successful extensions: 18769
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1977
Number of HSP's successfully gapped in prelim test: 1033
Number of HSP's that attempted gapping in prelim test: 15261
Number of HSP's gapped (non-prelim): 3577
length of query: 197
length of database: 191,569,459
effective HSP length: 111
effective length of query: 86
effective length of database: 131,672,083
effective search space: 11323799138
effective search space used: 11323799138
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)