Your job contains 1 sequence.
>psy6208
MKLVPEGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAA
DTVIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPP
RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSP
SIIFIDELDAIAPKREK
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6208
(197 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 910 2.7e-91 1
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 910 2.7e-91 1
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 910 2.7e-91 1
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 910 2.7e-91 1
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 910 2.7e-91 1
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 910 2.7e-91 1
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 910 2.7e-91 1
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 910 2.7e-91 1
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 910 2.7e-91 1
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 910 2.7e-91 1
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 902 1.9e-90 1
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 900 3.1e-90 1
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 879 5.3e-88 1
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 878 6.7e-88 1
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 838 1.2e-83 1
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas... 838 1.2e-83 1
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 829 1.0e-82 1
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 829 1.0e-82 1
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 826 2.2e-82 1
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 825 2.8e-82 1
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 823 4.5e-82 1
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 821 7.4e-82 1
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 819 1.2e-81 1
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 818 1.5e-81 1
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 817 2.0e-81 1
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 817 2.0e-81 1
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 797 2.6e-79 1
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 797 2.6e-79 1
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 774 7.1e-77 1
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 774 7.1e-77 1
UNIPROTKB|E1BTS8 - symbol:LOC426240 "Uncharacterized prot... 771 1.5e-76 1
GENEDB_PFALCIPARUM|PF07_0047 - symbol:PF07_0047 "cell div... 420 4.5e-38 1
UNIPROTKB|P46468 - symbol:PF07_0047 "Putative cell divisi... 420 4.5e-38 1
UNIPROTKB|E2RC37 - symbol:SPATA5 "Uncharacterized protein... 405 9.2e-37 1
UNIPROTKB|F1RQN5 - symbol:SPATA5 "Uncharacterized protein... 402 1.3e-36 1
UNIPROTKB|F1MFP1 - symbol:SPATA5 "Uncharacterized protein... 399 2.7e-36 1
UNIPROTKB|Q8NB90 - symbol:SPATA5 "Spermatogenesis-associa... 398 5.2e-36 1
UNIPROTKB|F1NLN4 - symbol:SPATA5 "Uncharacterized protein... 391 1.4e-35 1
RGD|1310478 - symbol:Spata5 "spermatogenesis associated 5... 393 1.5e-35 1
MGI|MGI:1927170 - symbol:Spata5 "spermatogenesis associat... 393 1.8e-35 1
UNIPROTKB|C9IZA5 - symbol:VCP "Transitional endoplasmic r... 365 1.5e-33 1
UNIPROTKB|Q58576 - symbol:pan "Proteasome-activating nucl... 363 2.5e-33 1
POMBASE|SPBC56F2.07c - symbol:SPBC56F2.07c "ribosome biog... 362 3.1e-32 1
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 352 3.7e-32 1
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 352 3.7e-32 1
SGD|S000002165 - symbol:RPT2 "ATPase of the 19S regulator... 345 2.0e-31 1
DICTYBASE|DDB_G0270784 - symbol:psmC1 "TAT binding protei... 342 4.2e-31 1
TAIR|locus:2061639 - symbol:RPT2b "regulatory particle AA... 339 8.8e-31 1
TAIR|locus:2119926 - symbol:RPT2a "regulatory particle AA... 339 8.8e-31 1
UNIPROTKB|F1NSP7 - symbol:PSMC1 "26S protease regulatory ... 338 1.1e-30 1
UNIPROTKB|F1NTZ4 - symbol:PSMC1 "26S protease regulatory ... 338 1.1e-30 1
UNIPROTKB|A4FUZ3 - symbol:PSMC1 "Proteasome (Prosome, mac... 338 1.1e-30 1
UNIPROTKB|F1PQ40 - symbol:PSMC1 "Uncharacterized protein"... 338 1.1e-30 1
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 338 1.1e-30 1
UNIPROTKB|P62191 - symbol:PSMC1 "26S protease regulatory ... 338 1.1e-30 1
UNIPROTKB|F2Z5J1 - symbol:PSMC1 "Uncharacterized protein"... 338 1.1e-30 1
MGI|MGI:106054 - symbol:Psmc1 "protease (prosome, macropa... 338 1.1e-30 1
RGD|621097 - symbol:Psmc1 "proteasome (prosome, macropain... 338 1.1e-30 1
CGD|CAL0005257 - symbol:RPT2 species:5476 "Candida albica... 337 1.4e-30 1
FB|FBgn0015282 - symbol:Rpt2 "Regulatory particle triple-... 336 1.8e-30 1
UNIPROTKB|Q90732 - symbol:PSMC1 "26S protease regulatory ... 336 1.8e-30 1
POMBASE|SPBC4.07c - symbol:rpt2 "19S proteasome regulator... 336 1.8e-30 1
ASPGD|ASPL0000049719 - symbol:AN2213 species:162425 "Emer... 332 4.9e-30 1
TAIR|locus:2161258 - symbol:RPT3 "regulatory particle tri... 330 7.9e-30 1
ZFIN|ZDB-GENE-030131-8730 - symbol:psmc1a "proteasome (pr... 330 7.9e-30 1
ZFIN|ZDB-GENE-040625-69 - symbol:psmc1b "proteasome (pros... 330 7.9e-30 1
ASPGD|ASPL0000036562 - symbol:AN2904 species:162425 "Emer... 329 1.0e-29 1
WB|WBGene00004502 - symbol:rpt-2 species:6239 "Caenorhabd... 329 1.0e-29 1
CGD|CAL0002187 - symbol:orf19.6432 species:5476 "Candida ... 333 3.6e-29 1
CGD|CAL0001552 - symbol:PR26 species:5476 "Candida albica... 323 4.4e-29 1
UNIPROTKB|Q5A0L8 - symbol:PR26 "Likely 26S proteasome reg... 323 4.4e-29 1
SGD|S000004389 - symbol:AFG2 "ATPase of the CDC48/PAS1/SE... 332 4.8e-29 1
DICTYBASE|DDB_G0289003 - symbol:psmC4 "HIV TAT binding-pr... 319 1.2e-28 1
UNIPROTKB|F1NU79 - symbol:PSMC5 "Uncharacterized protein"... 318 1.5e-28 1
UNIPROTKB|P62194 - symbol:PSMC5 "26S protease regulatory ... 318 1.5e-28 1
UNIPROTKB|E2RM61 - symbol:PSMC5 "Uncharacterized protein"... 318 1.5e-28 1
UNIPROTKB|J3QQM1 - symbol:PSMC5 "26S protease regulatory ... 318 1.5e-28 1
UNIPROTKB|J3QSA9 - symbol:PSMC5 "26S protease regulatory ... 318 1.5e-28 1
UNIPROTKB|P62195 - symbol:PSMC5 "26S protease regulatory ... 318 1.5e-28 1
UNIPROTKB|P62197 - symbol:PSMC5 "26S protease regulatory ... 318 1.5e-28 1
UNIPROTKB|Q4RG45 - symbol:GSTENG00035021001 "Chromosome 2... 318 1.5e-28 1
UNIPROTKB|Q6AZU7 - symbol:Q6AZU7 "Putative uncharacterize... 318 1.5e-28 1
MGI|MGI:105047 - symbol:Psmc5 "protease (prosome, macropa... 318 1.5e-28 1
RGD|708376 - symbol:Psmc5 "proteasome (prosome, macropain... 318 1.5e-28 1
ZFIN|ZDB-GENE-030131-6547 - symbol:psmc5 "proteasome (pro... 318 1.5e-28 1
DICTYBASE|DDB_G0278435 - symbol:DDB_G0278435 "AAA ATPase ... 328 1.7e-28 1
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 317 1.9e-28 1
UNIPROTKB|Q6P380 - symbol:psmc5 "Putative uncharacterized... 317 1.9e-28 1
WB|WBGene00015688 - symbol:C10G11.8 species:6239 "Caenorh... 317 1.9e-28 1
FB|FBgn0037742 - symbol:Rpt3R "Regulatory particle triple... 316 2.4e-28 1
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 316 2.4e-28 1
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 316 2.4e-28 1
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 315 3.1e-28 1
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 315 3.1e-28 1
SGD|S000003016 - symbol:RPT6 "ATPase of the 19S regulator... 315 3.1e-28 1
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 313 5.0e-28 1
FB|FBgn0039788 - symbol:Rpt6R "Regulatory particle triple... 313 5.0e-28 1
WB|WBGene00004503 - symbol:rpt-3 species:6239 "Caenorhabd... 313 5.0e-28 1
POMBASE|SPBC16E9.10c - symbol:SPBC16E9.10c "AAA family AT... 322 5.7e-28 1
GENEDB_PFALCIPARUM|PFD0665c - symbol:PFD0665c "26s protea... 312 6.4e-28 1
WARNING: Descriptions of 572 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 171/192 (89%), Positives = 184/192 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGGCRKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI 303
Query: 186 DELDAIAPKREK 197
DELDAIAPKREK
Sbjct: 304 DELDAIAPKREK 315
Score = 289 (106.8 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 52/113 (46%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E+V+ P+ HP F G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 171/192 (89%), Positives = 184/192 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGGCRKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI 303
Query: 186 DELDAIAPKREK 197
DELDAIAPKREK
Sbjct: 304 DELDAIAPKREK 315
Score = 289 (106.8 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 52/113 (46%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E+V+ P+ HP F G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 171/192 (89%), Positives = 184/192 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 140 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 199
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGGCRKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 200 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 259
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 260 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI 319
Query: 186 DELDAIAPKREK 197
DELDAIAPKREK
Sbjct: 320 DELDAIAPKREK 331
Score = 289 (106.8 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 52/113 (46%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E+V+ P+ HP F G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 490 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 549
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 550 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 602
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 171/192 (89%), Positives = 184/192 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGGCRKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI 303
Query: 186 DELDAIAPKREK 197
DELDAIAPKREK
Sbjct: 304 DELDAIAPKREK 315
Score = 289 (106.8 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 52/113 (46%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E+V+ P+ HP F G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 171/192 (89%), Positives = 184/192 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGGCRKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI 303
Query: 186 DELDAIAPKREK 197
DELDAIAPKREK
Sbjct: 304 DELDAIAPKREK 315
Score = 289 (106.8 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 52/113 (46%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E+V+ P+ HP F G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 171/192 (89%), Positives = 184/192 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGGCRKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI 303
Query: 186 DELDAIAPKREK 197
DELDAIAPKREK
Sbjct: 304 DELDAIAPKREK 315
Score = 289 (106.8 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 52/113 (46%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E+V+ P+ HP F G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 171/192 (89%), Positives = 184/192 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGGCRKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI 303
Query: 186 DELDAIAPKREK 197
DELDAIAPKREK
Sbjct: 304 DELDAIAPKREK 315
Score = 289 (106.8 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 52/113 (46%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E+V+ P+ HP F G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 171/192 (89%), Positives = 184/192 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGGCRKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI 303
Query: 186 DELDAIAPKREK 197
DELDAIAPKREK
Sbjct: 304 DELDAIAPKREK 315
Score = 289 (106.8 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 52/113 (46%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E+V+ P+ HP F G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 171/192 (89%), Positives = 184/192 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGGCRKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI 303
Query: 186 DELDAIAPKREK 197
DELDAIAPKREK
Sbjct: 304 DELDAIAPKREK 315
Score = 289 (106.8 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 52/113 (46%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E+V+ P+ HP F G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 171/192 (89%), Positives = 184/192 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGGCRKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI 303
Query: 186 DELDAIAPKREK 197
DELDAIAPKREK
Sbjct: 304 DELDAIAPKREK 315
Score = 286 (105.7 bits), Expect = 4.6e-24, P = 4.6e-24
Identities = 51/113 (45%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++++V+ P+ HP F G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 474 VTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 534 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 902 (322.6 bits), Expect = 1.9e-90, P = 1.9e-90
Identities = 167/192 (86%), Positives = 184/192 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLF+V+LKPYFLEAYRPVHK D+F+VRGGMRAVEFK+V+TDP P+CIVA DT+IH
Sbjct: 126 EGLTGNLFDVFLKPYFLEAYRPVHKGDIFLVRGGMRAVEFKVVETDPTPHCIVAPDTIIH 185
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N +GYDDIGGCRKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 186 CEGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 245
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTL+ARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 246 YGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI 305
Query: 186 DELDAIAPKREK 197
DELDAIAPKREK
Sbjct: 306 DELDAIAPKREK 317
Score = 288 (106.4 bits), Expect = 2.8e-24, P = 2.8e-24
Identities = 56/123 (45%), Positives = 83/123 (67%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E + V ++DIGG + +++E+V+ P+ +P F G+ P RG+L YGPPG G
Sbjct: 467 RETVVEVPH-VNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCG 525
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A+A+ANE A F I GPE+++ GESE+N+R F++A + +P I+F DELD+IA
Sbjct: 526 KTLLAKAIANECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIA 585
Query: 193 PKR 195
R
Sbjct: 586 KAR 588
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 900 (321.9 bits), Expect = 3.1e-90, P = 3.1e-90
Identities = 170/192 (88%), Positives = 183/192 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGG RKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFI 303
Query: 186 DELDAIAPKREK 197
DELDAIAPKREK
Sbjct: 304 DELDAIAPKREK 315
Score = 292 (107.8 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 55/123 (44%), Positives = 83/123 (67%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E N + ++DIGG +++E+V+ P+ HP F G+ P +G+L YGPPG G
Sbjct: 465 RETVVEVPN-ITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCG 523
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA
Sbjct: 524 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIA 583
Query: 193 PKR 195
R
Sbjct: 584 KAR 586
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 879 (314.5 bits), Expect = 5.3e-88, P = 5.3e-88
Identities = 165/187 (88%), Positives = 178/187 (95%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGGCRKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEE +KN+P+IIFI
Sbjct: 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFI 303
Query: 186 DELDAIA 192
DELDAIA
Sbjct: 304 DELDAIA 310
Score = 289 (106.8 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 52/113 (46%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E+V+ P+ HP F G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 478 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 537
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 538 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 590
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 878 (314.1 bits), Expect = 6.7e-88, P = 6.7e-88
Identities = 166/192 (86%), Positives = 178/192 (92%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFE+YLKPYFLEAYRP+H D FIVR MR +EFK+V TDP PYCIVA +TVI
Sbjct: 121 EGVTGNLFEIYLKPYFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVIF 180
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
C+GDPIKREEEEE+ NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGIL+
Sbjct: 181 CDGDPIKREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILM 240
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KNSP+IIFI
Sbjct: 241 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFI 300
Query: 186 DELDAIAPKREK 197
DE+DAIAPKR+K
Sbjct: 301 DEIDAIAPKRDK 312
Score = 292 (107.8 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 55/123 (44%), Positives = 80/123 (65%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E N + DIGG +++E+V+ P+ HP F G++P RG+L YGPPG G
Sbjct: 462 RETVVEVPNTT-WTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCG 520
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A+A+ANE A F + GPE+++ GESE+N+R F++A +P ++F DELD+IA
Sbjct: 521 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIA 580
Query: 193 PKR 195
R
Sbjct: 581 KAR 583
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
Identities = 158/192 (82%), Positives = 174/192 (90%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLF+V+L+PYF +AYRPVHK D+F V+ MR VEFK+V+TDPAP CIVA DTVIH
Sbjct: 129 EGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIH 188
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
EGDPIKREEEEEA N VGYDD+GG RKQLAQIKEMVELPLRHP LFKAIGVKPPRGILL
Sbjct: 189 YEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILL 248
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
+GPPGTGKTLIARAVANETGAFFFLINGPEIMSK++GESESNLRKAF E +KNSP+I+FI
Sbjct: 249 FGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFI 308
Query: 186 DELDAIAPKREK 197
DE+DAIAPKREK
Sbjct: 309 DEIDAIAPKREK 320
Score = 292 (107.8 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 55/123 (44%), Positives = 81/123 (65%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E N + DIGG + +++E+V+ P+ HP + G++P RG+L YGPPG G
Sbjct: 470 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 528
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A+A+ANE A F I GPE+++ GESE+N+R F++A +P ++F DELD+IA
Sbjct: 529 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIA 588
Query: 193 PKR 195
R
Sbjct: 589 KAR 591
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
Identities = 158/192 (82%), Positives = 174/192 (90%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLF+V+L+PYF +AYRPVHK D+F V+ MR VEFK+V+TDPAP CIVA DTVIH
Sbjct: 129 EGLTGNLFDVFLRPYFTDAYRPVHKGDIFTVQAAMRTVEFKVVETDPAPACIVAPDTVIH 188
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
EGDPIKREEEEEA N VGYDD+GG RKQLAQIKEMVELPLRHP LFKAIGVKPPRGILL
Sbjct: 189 YEGDPIKREEEEEALNEVGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILL 248
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
+GPPGTGKTLIARAVANETGAFFFLINGPEIMSK++GESESNLRKAF E +KNSP+I+FI
Sbjct: 249 FGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFI 308
Query: 186 DELDAIAPKREK 197
DE+DAIAPKREK
Sbjct: 309 DEIDAIAPKREK 320
Score = 292 (107.8 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 55/123 (44%), Positives = 81/123 (65%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E N + DIGG + +++E+V+ P+ HP + G++P RG+L YGPPG G
Sbjct: 470 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 528
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A+A+ANE A F I GPE+++ GESE+N+R F++A +P ++F DELD+IA
Sbjct: 529 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIA 588
Query: 193 PKR 195
R
Sbjct: 589 KAR 591
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
Identities = 152/192 (79%), Positives = 175/192 (91%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLF+V+LKPYFLEAYRP+HK D+F V+ MR VEFK+V+T+PAP CIV+ DT+IH
Sbjct: 130 EGLTGNLFDVFLKPYFLEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPACIVSPDTMIH 189
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
EGDPIKREEEEE+ N +GYDD+GG RKQLAQIKEMVELPLRHP LFKAIG+KPPRGILL
Sbjct: 190 YEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILL 249
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
+GPPGTGKTLIARAVANETG+FFFLINGPE+MSK++GESESNLRKAFEE +KN P+I+FI
Sbjct: 250 FGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFI 309
Query: 186 DELDAIAPKREK 197
DE+DAIAPKREK
Sbjct: 310 DEIDAIAPKREK 321
Score = 292 (107.8 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 55/123 (44%), Positives = 81/123 (65%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E N + DIGG + +++E+V+ P+ HP + G++P RG+L YGPPG G
Sbjct: 471 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 529
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A+A+ANE A F I GPE+++ GESE+N+R F++A +P ++F DELD+IA
Sbjct: 530 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIA 589
Query: 193 PKR 195
R
Sbjct: 590 KAR 592
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
Identities = 152/192 (79%), Positives = 175/192 (91%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLF+V+LKPYFLEAYRP+HK D+F V+ MR VEFK+V+T+PAP CIV+ DT+IH
Sbjct: 130 EGLTGNLFDVFLKPYFLEAYRPLHKGDIFTVQAAMRTVEFKVVETEPAPACIVSPDTMIH 189
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
EGDPIKREEEEE+ N +GYDD+GG RKQLAQIKEMVELPLRHP LFKAIG+KPPRGILL
Sbjct: 190 YEGDPIKREEEEESMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILL 249
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
+GPPGTGKTLIARAVANETG+FFFLINGPE+MSK++GESESNLRKAFEE +KN P+I+FI
Sbjct: 250 FGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFI 309
Query: 186 DELDAIAPKREK 197
DE+DAIAPKREK
Sbjct: 310 DEIDAIAPKREK 321
Score = 292 (107.8 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 55/123 (44%), Positives = 81/123 (65%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E N + DIGG + +++E+V+ P+ HP + G++P RG+L YGPPG G
Sbjct: 471 REAVVETPNTT-WSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCG 529
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A+A+ANE A F I GPE+++ GESE+N+R F++A +P ++F DELD+IA
Sbjct: 530 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIA 589
Query: 193 PKR 195
R
Sbjct: 590 KAR 592
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
Identities = 153/192 (79%), Positives = 175/192 (91%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLF+ YLKPYFLEAYRPV K DLF+VRGGMR+VEFK+++TDPA YC+VA DT I
Sbjct: 128 EGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIF 187
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+P+KRE+EE + VGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+GILL
Sbjct: 188 CEGEPVKREDEERLDD-VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILL 246
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEA+KN+PSIIFI
Sbjct: 247 YGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFI 306
Query: 186 DELDAIAPKREK 197
DE+D+IAPKREK
Sbjct: 307 DEIDSIAPKREK 318
Score = 302 (111.4 bits), Expect = 8.8e-26, P = 8.8e-26
Identities = 55/123 (44%), Positives = 85/123 (69%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E N V ++DIGG +++E V+ P+ HP F+ G+ P +G+L YGPPG G
Sbjct: 468 RETVVEVPN-VSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 526
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A+A+ANE A F + GPE+++ GESE+N+R+ F++A +++P ++F DELD+IA
Sbjct: 527 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 586
Query: 193 PKR 195
+R
Sbjct: 587 TQR 589
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 825 (295.5 bits), Expect = 2.8e-82, P = 2.8e-82
Identities = 153/192 (79%), Positives = 174/192 (90%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLF+ YLKPYFLEAYRPV K DLF+VRGGMR+VEFK+++TDPA YC+VA DT I
Sbjct: 128 EGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCVVAPDTEIF 187
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+P+KRE+EE VGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+GILL
Sbjct: 188 CEGEPVKREDEERLDE-VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILL 246
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEA+KN+PSIIFI
Sbjct: 247 YGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFI 306
Query: 186 DELDAIAPKREK 197
DE+D+IAPKREK
Sbjct: 307 DEIDSIAPKREK 318
Score = 303 (111.7 bits), Expect = 6.9e-26, P = 6.9e-26
Identities = 55/123 (44%), Positives = 85/123 (69%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E N V ++DIGG +++E V+ P+ HP F+ G+ P +G+L YGPPG G
Sbjct: 468 RETVVEVPN-VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 526
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A+A+ANE A F + GPE+++ GESE+N+R+ F++A +++P ++F DELD+IA
Sbjct: 527 KTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 586
Query: 193 PKR 195
+R
Sbjct: 587 TQR 589
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 823 (294.8 bits), Expect = 4.5e-82, P = 4.5e-82
Identities = 152/192 (79%), Positives = 174/192 (90%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG N+F+ YLKPYFLEAYRPV K DLF+VRGGMR++EFK+++TDPA YC+VA DT I
Sbjct: 129 EGVSGNIFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSIEFKVIETDPAEYCVVAPDTEIF 188
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EE VGYDD+GG RKQ+AQI+E+VELPLRHP LFK+IGVKPP+GILL
Sbjct: 189 CEGEPIKREDEERLDE-VGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILL 247
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPG+GKTLIARAVANETGAFFF INGPEIMSKLAGESESNLRKAFEEA+KN+PSIIFI
Sbjct: 248 YGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFI 307
Query: 186 DELDAIAPKREK 197
DE+D+IAPKREK
Sbjct: 308 DEIDSIAPKREK 319
Score = 304 (112.1 bits), Expect = 5.4e-26, P = 5.4e-26
Identities = 56/123 (45%), Positives = 85/123 (69%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E N V ++DIGG +++E V+ P+ HP F+ G+ P +G+L YGPPG G
Sbjct: 469 RETVVEVPN-VSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCG 527
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A +++P ++F DELD+IA
Sbjct: 528 KTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIA 587
Query: 193 PKR 195
+R
Sbjct: 588 TQR 590
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
Identities = 152/192 (79%), Positives = 174/192 (90%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG +LF+V+L PYF EAYRPV + D+F+VRGGMR VEFK+V+ DP Y IVA DTVIH
Sbjct: 142 EGLTGSLFDVFLAPYFREAYRPVRQGDIFLVRGGMRQVEFKVVEVDPPEYGIVAQDTVIH 201
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PI+R+EEE N VGYDDIGGCRKQ+AQI+EMVELPLRHP LFK+IG+KPPRG+LL
Sbjct: 202 CEGEPIQRDEEENNLNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKSIGIKPPRGVLL 261
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTL+ARAVANETGAFFFLINGPEIMSK+AGESESNLRKAFEEA+KNSP+IIFI
Sbjct: 262 YGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFI 321
Query: 186 DELDAIAPKREK 197
DE+D+IAPKREK
Sbjct: 322 DEIDSIAPKREK 333
Score = 302 (111.4 bits), Expect = 9.0e-26, P = 9.0e-26
Identities = 58/118 (49%), Positives = 80/118 (67%)
Query: 78 EASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIA 137
E N V ++DIGG + ++E V+ P+ HP F G+ P RG+L YGPPGTGKT++A
Sbjct: 489 EVPN-VRWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLA 547
Query: 138 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+AVANE A F + GPE++S GESESN+R F++A +P I+F+DELD+IA R
Sbjct: 548 KAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKAR 605
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 819 (293.4 bits), Expect = 1.2e-81, P = 1.2e-81
Identities = 149/192 (77%), Positives = 173/192 (90%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLF+V+LKPYF+EAYRPV K D F+VRGGMR VEFK+VD +P Y +VA DT+IH
Sbjct: 134 EGITGNLFDVFLKPYFVEAYRPVRKGDHFVVRGGMRQVEFKVVDVEPEEYAVVAQDTIIH 193
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
EG+PI RE+EE N VGYDDIGGCRKQ+AQI+EMVELPLRHP LFKAIG+KPPRG+L+
Sbjct: 194 WEGEPINREDEENNMNEVGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLM 253
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTL+ARAVANETGAFFFLINGPE+MSK+AGESESNLRKAFEEA+KN+P+IIFI
Sbjct: 254 YGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFI 313
Query: 186 DELDAIAPKREK 197
DE+D+IAPKR+K
Sbjct: 314 DEIDSIAPKRDK 325
Score = 309 (113.8 bits), Expect = 1.7e-26, P = 1.7e-26
Identities = 59/123 (47%), Positives = 84/123 (68%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E+ N V +DD+GG + ++KE VE P+ HP + G+ P +G+L YGPPGTG
Sbjct: 475 RETVVESVN-VTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTG 533
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A+AVA E A F + GPE++S GESESN+R F++A +P+++F+DELD+IA
Sbjct: 534 KTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIA 593
Query: 193 PKR 195
R
Sbjct: 594 KAR 596
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 818 (293.0 bits), Expect = 1.5e-81, P = 1.5e-81
Identities = 154/192 (80%), Positives = 172/192 (89%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLF++YLKPYFLEAYRPV K DLF+VRGGMRAVEFK+V+TDP YCIVA +T IH
Sbjct: 123 EGLSGNLFDLYLKPYFLEAYRPVRKGDLFLVRGGMRAVEFKVVETDPGEYCIVAPETFIH 182
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+ +KRE+E+ VGYDDIGG RKQL QI+E+VELPLRHP LFK IGVKPP+GILL
Sbjct: 183 CEGEAVKREDEDRLDE-VGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILL 241
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPG GKT+IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA+KN+PSIIFI
Sbjct: 242 YGPPGCGKTMIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFI 301
Query: 186 DELDAIAPKREK 197
DE+D+IAPKREK
Sbjct: 302 DEIDSIAPKREK 313
Score = 290 (107.1 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 51/111 (45%), Positives = 79/111 (71%)
Query: 85 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 144
++DIGG +++E V+ P+ HP F+ G++P +G+L YGPPG GKTL+A+A+ANE
Sbjct: 474 WEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKAIANEC 533
Query: 145 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 534 QANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSR 584
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 149/192 (77%), Positives = 174/192 (90%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG +LF++YLKPYF+EAYRPV K DLF VRGGMR VEFK+V+ DP IVA DT+IH
Sbjct: 135 EGINGSLFDLYLKPYFVEAYRPVRKGDLFTVRGGMRQVEFKVVEVDPEEIAIVAQDTIIH 194
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PI RE+EE + N VGYDDIGGC+KQ+AQI+E+VELPLRHP LFK+IG+KPP+GIL+
Sbjct: 195 CEGEPINREDEENSLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILM 254
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKT++ARAVANETGAFFFLINGPEIMSK+AGESESNLRKAFEEA+KNSPSIIFI
Sbjct: 255 YGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFI 314
Query: 186 DELDAIAPKREK 197
DE+D+IAPKR+K
Sbjct: 315 DEIDSIAPKRDK 326
Score = 302 (111.4 bits), Expect = 8.7e-27, Sum P(2) = 8.7e-27
Identities = 59/123 (47%), Positives = 83/123 (67%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E N V +DDIGG ++KE VE P+ HP ++ G+ P +G+L +GPPGTG
Sbjct: 476 RETVVENVN-VTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTG 534
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A+AVA E A F + GPE++S GESESN+R F++A +P+++F+DELD+IA
Sbjct: 535 KTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIA 594
Query: 193 PKR 195
R
Sbjct: 595 KAR 597
Score = 35 (17.4 bits), Expect = 8.7e-27, Sum P(2) = 8.7e-27
Identities = 15/40 (37%), Positives = 18/40 (45%)
Query: 48 VDTDPAPYCIVAADTVIHCEGDPIKREEEE---EASNAVG 84
V D A C AA I + D I EEE E N++G
Sbjct: 418 VGADIASLCSEAAMQQIREKMDLIDLEEETIDTEVLNSLG 457
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 149/192 (77%), Positives = 174/192 (90%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG +LF++YLKPYF+EAYRPV K DLF VRGGMR VEFK+V+ DP IVA DT+IH
Sbjct: 135 EGINGSLFDLYLKPYFVEAYRPVRKGDLFTVRGGMRQVEFKVVEVDPEEIAIVAQDTIIH 194
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PI RE+EE + N VGYDDIGGC+KQ+AQI+E+VELPLRHP LFK+IG+KPP+GIL+
Sbjct: 195 CEGEPINREDEENSLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILM 254
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKT++ARAVANETGAFFFLINGPEIMSK+AGESESNLRKAFEEA+KNSPSIIFI
Sbjct: 255 YGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFI 314
Query: 186 DELDAIAPKREK 197
DE+D+IAPKR+K
Sbjct: 315 DEIDSIAPKRDK 326
Score = 302 (111.4 bits), Expect = 8.7e-27, Sum P(2) = 8.7e-27
Identities = 59/123 (47%), Positives = 83/123 (67%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E N V +DDIGG ++KE VE P+ HP ++ G+ P +G+L +GPPGTG
Sbjct: 476 RETVVENVN-VTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTG 534
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A+AVA E A F + GPE++S GESESN+R F++A +P+++F+DELD+IA
Sbjct: 535 KTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIA 594
Query: 193 PKR 195
R
Sbjct: 595 KAR 597
Score = 35 (17.4 bits), Expect = 8.7e-27, Sum P(2) = 8.7e-27
Identities = 15/40 (37%), Positives = 18/40 (45%)
Query: 48 VDTDPAPYCIVAADTVIHCEGDPIKREEEE---EASNAVG 84
V D A C AA I + D I EEE E N++G
Sbjct: 418 VGADIASLCSEAAMQQIREKMDLIDLEEETIDTEVLNSLG 457
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 148/192 (77%), Positives = 171/192 (89%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG +LF+VYL PYF + YRPV + DLF VRGGMR VEFK+V+ DP + IVA DT+IH
Sbjct: 145 EGLTGSLFDVYLAPYFRDGYRPVKQGDLFTVRGGMRQVEFKVVEVDPPEFGIVAPDTIIH 204
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
EG+PI+RE+EE N VGYDDIGGCRKQ+AQI+E+VELPLRHP LFK+IG+KPPRGIL+
Sbjct: 205 SEGEPIQREDEENNLNEVGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILM 264
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTL+ARAVANETGAFFFLINGPEIMSK+AGESESNLRKAFEEA+KNSP+IIFI
Sbjct: 265 YGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFI 324
Query: 186 DELDAIAPKREK 197
DE+D+IAPKREK
Sbjct: 325 DEIDSIAPKREK 336
Score = 303 (111.7 bits), Expect = 7.1e-26, P = 7.1e-26
Identities = 57/118 (48%), Positives = 81/118 (68%)
Query: 78 EASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIA 137
E N V ++DIGG + ++ E V+ P+ HP F+ G+ P RG+L YGPPGTGKT++A
Sbjct: 492 EVPN-VRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLA 550
Query: 138 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+AVANE A F + GPE++S GESESN+R F++A +P ++F+DELD+IA R
Sbjct: 551 KAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSR 608
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
Identities = 147/192 (76%), Positives = 172/192 (89%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG +LF+VYLKPYF+EAYRP+ K DLF+VRG MR VEFK+VD P + IV+ DT+IH
Sbjct: 144 EGLTGSLFDVYLKPYFVEAYRPIRKGDLFVVRGSMRQVEFKVVDVAPDEFGIVSQDTIIH 203
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
EG+PI RE+EE + VGYDDIGGCR+Q+AQI+E+VELPLRHP LFK+IG+KPPRGIL+
Sbjct: 204 WEGEPINREDEESSLAEVGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILM 263
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
YGPPGTGKTL+ARAVANETGAFFFLINGPEIMSK+AGESESNLRKAFEEA+KNSP+IIFI
Sbjct: 264 YGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFI 323
Query: 186 DELDAIAPKREK 197
DE+D+IAPKREK
Sbjct: 324 DEIDSIAPKREK 335
Score = 294 (108.6 bits), Expect = 6.4e-25, P = 6.4e-25
Identities = 56/123 (45%), Positives = 83/123 (67%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E N V ++DIGG + +++E V++P+ + F GV P +G+L +GPPGTG
Sbjct: 485 RETVVEVPN-VRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTG 543
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A+A+ANE A F + GPE++S GESESN+R F++A +P ++F+DELD+IA
Sbjct: 544 KTLLAKAIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIA 603
Query: 193 PKR 195
R
Sbjct: 604 KAR 606
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 140/186 (75%), Positives = 169/186 (90%)
Query: 12 LFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIHCEGDPI 71
LFE++LKPYF E+YRPV K DLF+VRGG +VEFK+V+ DP +CIV+ DTVI+ EGDPI
Sbjct: 134 LFEIFLKPYFNESYRPVKKGDLFLVRGGFMSVEFKVVEVDPDDFCIVSPDTVIYYEGDPI 193
Query: 72 KREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGT 131
KR++EE+ +GYDDIGGC+KQLAQI+EM+ELPLRHP LFK +GVKPPRG+LLYGPPG+
Sbjct: 194 KRDDEEKLDE-IGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGS 252
Query: 132 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAI 191
GKT IARAVANETGAFFFLINGPE+MSK+AGE+E+NLR+AFEEA+KNSP+IIFIDE+D+I
Sbjct: 253 GKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSI 312
Query: 192 APKREK 197
APKREK
Sbjct: 313 APKREK 318
Score = 296 (109.3 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 57/123 (46%), Positives = 83/123 (67%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E N V +DDIGG + + ++EM+ P+ HP F+ G+ P RG+L YGPPG G
Sbjct: 468 RETVVEVPN-VKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCG 526
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A+AVA+E A F I GPE+++ GESE+N+R+ F++A +P ++F DELD+I
Sbjct: 527 KTLLAKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIG 586
Query: 193 PKR 195
+R
Sbjct: 587 TQR 589
Score = 37 (18.1 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 48 VDTDPAPYCIVAADTVIHCEGDPIKREEE 76
V D A C AA T I + D I E+E
Sbjct: 410 VGADLAQLCTEAALTCIREKMDVIDLEDE 438
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 140/186 (75%), Positives = 169/186 (90%)
Query: 12 LFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIHCEGDPI 71
LFE++LKPYF E+YRPV K DLF+VRGG +VEFK+V+ DP +CIV+ DTVI+ EGDPI
Sbjct: 134 LFEIFLKPYFNESYRPVKKGDLFLVRGGFMSVEFKVVEVDPDDFCIVSPDTVIYYEGDPI 193
Query: 72 KREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGT 131
KR++EE+ +GYDDIGGC+KQLAQI+EM+ELPLRHP LFK +GVKPPRG+LLYGPPG+
Sbjct: 194 KRDDEEKLDE-IGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGS 252
Query: 132 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAI 191
GKT IARAVANETGAFFFLINGPE+MSK+AGE+E+NLR+AFEEA+KNSP+IIFIDE+D+I
Sbjct: 253 GKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSI 312
Query: 192 APKREK 197
APKREK
Sbjct: 313 APKREK 318
Score = 296 (109.3 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 57/123 (46%), Positives = 83/123 (67%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E N V +DDIGG + + ++EM+ P+ HP F+ G+ P RG+L YGPPG G
Sbjct: 468 RETVVEVPN-VKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCG 526
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A+AVA+E A F I GPE+++ GESE+N+R+ F++A +P ++F DELD+I
Sbjct: 527 KTLLAKAVASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIG 586
Query: 193 PKR 195
+R
Sbjct: 587 TQR 589
Score = 37 (18.1 bits), Expect = 2.4e-26, Sum P(2) = 2.4e-26
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 48 VDTDPAPYCIVAADTVIHCEGDPIKREEE 76
V D A C AA T I + D I E+E
Sbjct: 410 VGADLAQLCTEAALTCIREKMDVIDLEDE 438
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
Identities = 145/170 (85%), Positives = 155/170 (91%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 124 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
CEG+PIKRE+EEE+ N VGYDDIGGCRKQLAQIKEMVELPLRHP+LFKAIGVKPPRGILL
Sbjct: 184 CEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILL 243
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA 175
YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGE ES RK A
Sbjct: 244 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGEGESACRKKISPA 293
Score = 289 (106.8 bits), Expect = 2.2e-24, P = 2.2e-24
Identities = 52/113 (46%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E+V+ P+ HP F G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 472 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 531
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 532 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 584
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 420 (152.9 bits), Expect = 4.5e-38, P = 4.5e-38
Identities = 79/199 (39%), Positives = 131/199 (65%)
Query: 4 VPEGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIV-----DTDPAPYCIV 58
+P L + + PY +Y+P+ + + +EFK++ +++ + +
Sbjct: 440 IPNLSREELEKAVIHPYLKNSYKPLRVNSNIYIYYKNNKIEFKVLKIISEESENEEFGCI 499
Query: 59 AADTVIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVK 118
+ + + +KRE+ EE ++ + Y+D+GG +KQL +I+E++ELPL++P +F +IG+
Sbjct: 500 GEHSQLTLAEEYLKREDYEENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGIS 559
Query: 119 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKN 178
P+G+L++G PGTGKT IA+A+ANE+ A+ ++INGPEIMSK GESE LRK F++A +
Sbjct: 560 APKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEK 619
Query: 179 SPSIIFIDELDAIAPKREK 197
+P IIFIDE+D+IA KR K
Sbjct: 620 TPCIIFIDEIDSIANKRSK 638
Score = 270 (100.1 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 54/127 (42%), Positives = 79/127 (62%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
+P E + V ++DIGG + Q+KE + PL + L+ +GILLYGP
Sbjct: 917 NPSSLRERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGP 976
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PG GKTL+A+A+ANE A F + GPE+++ GESE+N+R F++A SP IIF DE+
Sbjct: 977 PGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEI 1036
Query: 189 DAIAPKR 195
D++A +R
Sbjct: 1037 DSLAKER 1043
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 420 (152.9 bits), Expect = 4.5e-38, P = 4.5e-38
Identities = 79/199 (39%), Positives = 131/199 (65%)
Query: 4 VPEGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIV-----DTDPAPYCIV 58
+P L + + PY +Y+P+ + + +EFK++ +++ + +
Sbjct: 440 IPNLSREELEKAVIHPYLKNSYKPLRVNSNIYIYYKNNKIEFKVLKIISEESENEEFGCI 499
Query: 59 AADTVIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVK 118
+ + + +KRE+ EE ++ + Y+D+GG +KQL +I+E++ELPL++P +F +IG+
Sbjct: 500 GEHSQLTLAEEYLKREDYEENNDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGIS 559
Query: 119 PPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKN 178
P+G+L++G PGTGKT IA+A+ANE+ A+ ++INGPEIMSK GESE LRK F++A +
Sbjct: 560 APKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEK 619
Query: 179 SPSIIFIDELDAIAPKREK 197
+P IIFIDE+D+IA KR K
Sbjct: 620 TPCIIFIDEIDSIANKRSK 638
Score = 270 (100.1 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 54/127 (42%), Positives = 79/127 (62%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
+P E + V ++DIGG + Q+KE + PL + L+ +GILLYGP
Sbjct: 917 NPSSLRERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGP 976
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PG GKTL+A+A+ANE A F + GPE+++ GESE+N+R F++A SP IIF DE+
Sbjct: 977 PGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEI 1036
Query: 189 DAIAPKR 195
D++A +R
Sbjct: 1037 DSLAKER 1043
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 405 (147.6 bits), Expect = 9.2e-37, P = 9.2e-37
Identities = 78/122 (63%), Positives = 94/122 (77%)
Query: 75 EEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKT 134
EEE+ V YD IGG QL I+E++ELPL+ P LFK+ G+ PPRG+LLYGPPGTGKT
Sbjct: 342 EEEDNQFKVTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKT 401
Query: 135 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPK 194
+IARAVANE GA+ +INGPEI+SK GE+E+ LR+ F EA PSIIFIDELDA+ PK
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 461
Query: 195 RE 196
RE
Sbjct: 462 RE 463
Score = 318 (117.0 bits), Expect = 2.0e-27, P = 2.0e-27
Identities = 63/123 (51%), Positives = 85/123 (69%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE + N V + DIGG ++K+ VE PL+HP F +G++PP+G+LLYGPPG
Sbjct: 615 REVAIDVPN-VSWSDIGGLENIKLKLKQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCS 673
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KT+IA+A+ANE+G F I GPE+M+K GESE +R+ F +A SPSIIF DELDA+A
Sbjct: 674 KTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVSPSIIFFDELDALA 733
Query: 193 PKR 195
+R
Sbjct: 734 IER 736
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 402 (146.6 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 75/124 (60%), Positives = 96/124 (77%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
+ ++++ V YD IGG QL +I+E++ELPL+ P LFK+ G+ PPRG+LLYGPPGTG
Sbjct: 334 KSKDQDNQLKVTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTG 393
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KT+IARAVANE GA+ +INGPEI+SK GE+E+ LR+ F EA PSIIFIDELDA+
Sbjct: 394 KTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALC 453
Query: 193 PKRE 196
PKRE
Sbjct: 454 PKRE 457
Score = 318 (117.0 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 62/123 (50%), Positives = 85/123 (69%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE + N V + DIGG ++K+ VE PL+HP F +G++PP+G+LLYGPPG
Sbjct: 609 REVAIDVPN-VSWSDIGGLENIKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCS 667
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KT+IA+A+ANE+G F I GPE+M+K GESE +R+ F +A +PSIIF DELDA+A
Sbjct: 668 KTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALA 727
Query: 193 PKR 195
+R
Sbjct: 728 VER 730
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 399 (145.5 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 77/126 (61%), Positives = 96/126 (76%)
Query: 73 REEEEEASNA--VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
R ++ +N V YD IGG QL +I+E++ELPL+ P LFK+ G+ PPRG+LLYGPPG
Sbjct: 329 RTNSKDQANQLKVTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPG 388
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKT+IARAVANE GA+ +INGPEI+SK GE+E+ LR+ F EA PSIIFIDELDA
Sbjct: 389 TGKTMIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDA 448
Query: 191 IAPKRE 196
+ PKRE
Sbjct: 449 LCPKRE 454
Score = 320 (117.7 bits), Expect = 9.2e-28, P = 9.2e-28
Identities = 62/123 (50%), Positives = 85/123 (69%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE + N V + DIGG ++K+ VE PL+HP F +G++PP+G+LLYGPPG
Sbjct: 606 REVAVDVPN-VSWSDIGGLENVKLKLKQAVEWPLKHPESFTQMGIQPPKGVLLYGPPGCS 664
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KT+IA+A+ANE+G F I GPE+M+K GESE +R+ F +A +PSIIF DELDA+A
Sbjct: 665 KTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALA 724
Query: 193 PKR 195
+R
Sbjct: 725 VER 727
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 398 (145.2 bits), Expect = 5.2e-36, P = 5.2e-36
Identities = 86/159 (54%), Positives = 108/159 (67%)
Query: 41 RAVEFKI---VDTDPAPYCIVAADTVIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQ 97
R ++F I +TD Y I + V E D K +E++ V YD IGG QL
Sbjct: 308 RLLKFSIGAKCNTDTF-YFISSTTRVNFTEID--KNSKEQDNQFKVTYDMIGGLSSQLKA 364
Query: 98 IKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM 157
I+E++ELPL+ P LFK+ G+ PRG+LLYGPPGTGKT+IARAVANE GA+ +INGPEI+
Sbjct: 365 IREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVANEVGAYVSVINGPEII 424
Query: 158 SKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKRE 196
SK GE+E+ LR+ F EA PSIIFIDELDA+ PKRE
Sbjct: 425 SKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKRE 463
Score = 312 (114.9 bits), Expect = 9.0e-27, P = 9.0e-27
Identities = 61/123 (49%), Positives = 85/123 (69%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE + N V + DIGG ++++ VE PL+HP F +G++PP+G+LLYGPPG
Sbjct: 615 REIAIDVPN-VSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCS 673
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KT+IA+A+ANE+G F I GPE+M+K GESE +R+ F +A +PSIIF DELDA+A
Sbjct: 674 KTMIAKALANESGLNFLAIKGPELMNKYVGESERAVRETFRKARAVAPSIIFFDELDALA 733
Query: 193 PKR 195
+R
Sbjct: 734 VER 736
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 391 (142.7 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 77/122 (63%), Positives = 90/122 (73%)
Query: 75 EEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKT 134
E+ + V YD IGG QL I+E VELPL+ LFK+ G+ PPRG+LLYGPPGTGKT
Sbjct: 307 EDSDHGPQVTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLYGPPGTGKT 366
Query: 135 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPK 194
LIA+A+ANE GA +INGPEI+SK GESES LR+ F EA PSIIFIDELDA+ PK
Sbjct: 367 LIAKAIANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFIDELDALCPK 426
Query: 195 RE 196
RE
Sbjct: 427 RE 428
Score = 308 (113.5 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 63/149 (42%), Positives = 94/149 (63%)
Query: 49 DTDPAPYCIVAADTVIHCEGDPIKREEEEEASNA--VGYDDIGGCRKQLAQIKEMVELPL 106
DT+ A ++A + + D E A + V + DIGG ++K+ VE PL
Sbjct: 553 DTEVAGSVMIAFNDFLQGMKDVRPSAMREVAVDVPKVSWSDIGGLEDVKLKLKQAVEWPL 612
Query: 107 RHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 166
+HP F +G++PP+G+LLYGPPG KT+IA+A+A+E+G F + GPE+M+K GESE
Sbjct: 613 KHPDSFIRMGIQPPKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPELMNKYVGESER 672
Query: 167 NLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+R+ F +A SPSI+F DE+DA+A +R
Sbjct: 673 AVREIFRKARMVSPSILFFDEIDALAVER 701
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 393 (143.4 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 75/122 (61%), Positives = 94/122 (77%)
Query: 75 EEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKT 134
+E+++ V YD IGG QL I+E++ELPL+ P LFK+ G+ PRG+LLYGPPGTGKT
Sbjct: 342 KEQDSQFKVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKT 401
Query: 135 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPK 194
+IARAVANE GA+ +INGPEI+SK GE+E+ LR+ F EA PSIIFIDELDA+ PK
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 461
Query: 195 RE 196
RE
Sbjct: 462 RE 463
Score = 320 (117.7 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 62/123 (50%), Positives = 85/123 (69%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE + N V + DIGG ++K+ VE PL+HP F +G++PP+G+LLYGPPG
Sbjct: 615 REVAIDVPN-VSWSDIGGLENIKLKLKQAVEWPLKHPKSFSRMGIQPPKGVLLYGPPGCS 673
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KT+IA+A+ANE+G F I GPE+M+K GESE +R+ F +A +PSIIF DELDA+A
Sbjct: 674 KTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREVFRKARAVAPSIIFFDELDALA 733
Query: 193 PKR 195
+R
Sbjct: 734 VER 736
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 393 (143.4 bits), Expect = 1.8e-35, P = 1.8e-35
Identities = 75/122 (61%), Positives = 94/122 (77%)
Query: 75 EEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKT 134
+E+++ V YD IGG QL I+E++ELPL+ P LFK+ G+ PRG+LLYGPPGTGKT
Sbjct: 342 KEQDSQFKVTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKT 401
Query: 135 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPK 194
+IARAVANE GA+ +INGPEI+SK GE+E+ LR+ F EA PSIIFIDELDA+ PK
Sbjct: 402 MIARAVANEVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPK 461
Query: 195 RE 196
RE
Sbjct: 462 RE 463
Score = 319 (117.4 bits), Expect = 1.6e-27, P = 1.6e-27
Identities = 62/123 (50%), Positives = 85/123 (69%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE + N V + DIGG ++K+ VE PL+HP F +G++PP+G+LLYGPPG
Sbjct: 615 REVAIDVPN-VSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKGVLLYGPPGCS 673
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KT+IA+A+ANE+G F I GPE+M+K GESE +R+ F +A +PSIIF DELDA+A
Sbjct: 674 KTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAVAPSIIFFDELDALA 733
Query: 193 PKR 195
+R
Sbjct: 734 VER 736
>UNIPROTKB|C9IZA5 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0005102 "receptor binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0031593
"polyubiquitin binding" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0051260 "protein
homooligomerization" evidence=IEA] [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR005938 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043234 GO:GO:0051260 GO:GO:0016887 GO:GO:0006919
GO:GO:0006511 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GO:GO:0070842 EMBL:AL353795 HGNC:HGNC:12666 ChiTaRS:VCP
IPI:IPI00915799 ProteinModelPortal:C9IZA5 SMR:C9IZA5 STRING:C9IZA5
PRIDE:C9IZA5 Ensembl:ENST00000448530 HOGENOM:HOG000184195
ArrayExpress:C9IZA5 Bgee:C9IZA5 Uniprot:C9IZA5
Length = 160
Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 65/82 (79%), Positives = 74/82 (90%)
Query: 6 EGEMSNLFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIH 65
EG NLFEVYLKPYFLEAYRP+ K D+F+VRGGMRAVEFK+V+TDP+PYCIVA DTVIH
Sbjct: 79 EGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIH 138
Query: 66 CEGDPIKREEEEEASNAVGYDD 87
CEG+PIKRE+EEE+ N VGYDD
Sbjct: 139 CEGEPIKREDEEESLNEVGYDD 160
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 70/124 (56%), Positives = 93/124 (75%)
Query: 72 KREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGT 131
K E +E N V Y+DIGG KQ+ +I+E+VELPL+HP LF+ +G++PP+GILLYGPPGT
Sbjct: 157 KAMEVDERPN-VRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGT 215
Query: 132 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAI 191
GKTL+A+AVA ET A F + G E++ K GE S ++ F+ A + +PSIIFIDE+DAI
Sbjct: 216 GKTLLAKAVATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAI 275
Query: 192 APKR 195
A KR
Sbjct: 276 AAKR 279
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 362 (132.5 bits), Expect = 3.1e-32, P = 3.1e-32
Identities = 67/115 (58%), Positives = 88/115 (76%)
Query: 81 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAV 140
+AV + IGG + Q+AQI+++VELP ++P LFK + PPRG+LLYGPPGTGKT++ RAV
Sbjct: 274 SAVTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAV 333
Query: 141 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A E A F I+GP ++ K GE+ES LRK FE+A + PSIIFIDE+DA+APKR
Sbjct: 334 AAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKR 388
Score = 306 (112.8 bits), Expect = 3.3e-26, P = 3.3e-26
Identities = 59/123 (47%), Positives = 81/123 (65%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
RE E+ N V + DIGG + ++KE VE PL H F +GV+PP+G+LLYGPPG
Sbjct: 536 REFMMESPN-VHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCS 594
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KT+ A+A+A ETG F + GPE+ K GESE +R+ F++A + SPS+IF DE+DA+
Sbjct: 595 KTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALT 654
Query: 193 PKR 195
R
Sbjct: 655 ANR 657
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 65/129 (50%), Positives = 92/129 (71%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ + E + Y DIGG Q+ +IKE VELPL HP L++ IG+KPP+G++LY
Sbjct: 174 EVDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILY 233
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+A+AVANET A F + G E++ K G+ +R+ F+ A++++PSI+FID
Sbjct: 234 GPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFID 293
Query: 187 ELDAIAPKR 195
E+DA+ KR
Sbjct: 294 EIDAVGTKR 302
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 65/129 (50%), Positives = 92/129 (71%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ + E + Y DIGG Q+ +IKE VELPL HP L++ IG+KPP+G++LY
Sbjct: 174 EVDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILY 233
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+A+AVANET A F + G E++ K G+ +R+ F+ A++++PSI+FID
Sbjct: 234 GPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFID 293
Query: 187 ELDAIAPKR 195
E+DA+ KR
Sbjct: 294 EIDAVGTKR 302
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
Identities = 65/133 (48%), Positives = 91/133 (68%)
Query: 63 VIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRG 122
V+ + DP+ + + S Y DIGG Q+ +IKE VELPL HP L++ +G+KPP+G
Sbjct: 159 VLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKG 218
Query: 123 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSI 182
++LYG PGTGKTL+A+AVAN+T A F I G E++ K G+ R+ F+ A +N+PSI
Sbjct: 219 VILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSI 278
Query: 183 IFIDELDAIAPKR 195
+FIDE+DAI KR
Sbjct: 279 VFIDEIDAIGTKR 291
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 64/133 (48%), Positives = 91/133 (68%)
Query: 63 VIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRG 122
VI E DP+ + E + Y DIGG Q+ ++KE +ELPL HP L++ IG+KPP+G
Sbjct: 161 VIDGEVDPMVNVMKVEKAPTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKG 220
Query: 123 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSI 182
++LYG PGTGKTL+A+AVAN+T A F + G E++ K G+ +R+ F AD+ +PSI
Sbjct: 221 VILYGEPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSI 280
Query: 183 IFIDELDAIAPKR 195
+FIDE+DA+ KR
Sbjct: 281 VFIDEIDAVGTKR 293
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 65/133 (48%), Positives = 89/133 (66%)
Query: 63 VIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRG 122
++ E DP+ + E + Y DIGG Q+ +IKE VELPL HP L++ IG+KPP+G
Sbjct: 165 ILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKG 224
Query: 123 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSI 182
++LYG PGTGKTL+A+AVAN T A F + G E++ K G+ +R+ F AD SPSI
Sbjct: 225 VILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSI 284
Query: 183 IFIDELDAIAPKR 195
+FIDE+DA+ KR
Sbjct: 285 VFIDEIDAVGTKR 297
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 65/133 (48%), Positives = 89/133 (66%)
Query: 63 VIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRG 122
++ E DP+ + E + Y DIGG Q+ +IKE VELPL HP L++ IG+KPP+G
Sbjct: 165 ILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKG 224
Query: 123 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSI 182
++LYG PGTGKTL+A+AVAN T A F + G E++ K G+ +R+ F AD SPSI
Sbjct: 225 VILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSI 284
Query: 183 IFIDELDAIAPKR 195
+FIDE+DA+ KR
Sbjct: 285 VFIDEIDAVGTKR 297
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 69/156 (44%), Positives = 99/156 (63%)
Query: 48 VDTDPA-PYCIVAADTVIHC-------EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIK 99
VD D P C V + +H + DP+ + E + Y DIGG Q+ +IK
Sbjct: 138 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 197
Query: 100 EMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 159
E VELPL HP ++ +G+KPP+G++LYGPPGTGKTL+A+AVAN+T A F + G E++ K
Sbjct: 198 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 257
Query: 160 LAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
G+ +R+ F A++++PSI+FIDE+DAI KR
Sbjct: 258 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 293
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 69/156 (44%), Positives = 99/156 (63%)
Query: 48 VDTDPA-PYCIVAADTVIHC-------EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIK 99
VD D P C V + +H + DP+ + E + Y DIGG Q+ +IK
Sbjct: 137 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 196
Query: 100 EMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 159
E VELPL HP ++ +G+KPP+G++LYGPPGTGKTL+A+AVAN+T A F + G E++ K
Sbjct: 197 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 256
Query: 160 LAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
G+ +R+ F A++++PSI+FIDE+DAI KR
Sbjct: 257 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 292
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 69/156 (44%), Positives = 99/156 (63%)
Query: 48 VDTDPA-PYCIVAADTVIHC-------EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIK 99
VD D P C V + +H + DP+ + E + Y DIGG Q+ +IK
Sbjct: 139 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 198
Query: 100 EMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 159
E VELPL HP ++ +G+KPP+G++LYGPPGTGKTL+A+AVAN+T A F + G E++ K
Sbjct: 199 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 258
Query: 160 LAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
G+ +R+ F A++++PSI+FIDE+DAI KR
Sbjct: 259 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 69/156 (44%), Positives = 99/156 (63%)
Query: 48 VDTDPA-PYCIVAADTVIHC-------EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIK 99
VD D P C V + +H + DP+ + E + Y DIGG Q+ +IK
Sbjct: 139 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 198
Query: 100 EMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 159
E VELPL HP ++ +G+KPP+G++LYGPPGTGKTL+A+AVAN+T A F + G E++ K
Sbjct: 199 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 258
Query: 160 LAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
G+ +R+ F A++++PSI+FIDE+DAI KR
Sbjct: 259 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 69/156 (44%), Positives = 99/156 (63%)
Query: 48 VDTDPA-PYCIVAADTVIHC-------EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIK 99
VD D P C V + +H + DP+ + E + Y DIGG Q+ +IK
Sbjct: 66 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 125
Query: 100 EMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 159
E VELPL HP ++ +G+KPP+G++LYGPPGTGKTL+A+AVAN+T A F + G E++ K
Sbjct: 126 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 185
Query: 160 LAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
G+ +R+ F A++++PSI+FIDE+DAI KR
Sbjct: 186 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 221
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 69/156 (44%), Positives = 99/156 (63%)
Query: 48 VDTDPA-PYCIVAADTVIHC-------EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIK 99
VD D P C V + +H + DP+ + E + Y DIGG Q+ +IK
Sbjct: 139 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 198
Query: 100 EMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 159
E VELPL HP ++ +G+KPP+G++LYGPPGTGKTL+A+AVAN+T A F + G E++ K
Sbjct: 199 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 258
Query: 160 LAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
G+ +R+ F A++++PSI+FIDE+DAI KR
Sbjct: 259 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 69/156 (44%), Positives = 99/156 (63%)
Query: 48 VDTDPA-PYCIVAADTVIHC-------EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIK 99
VD D P C V + +H + DP+ + E + Y DIGG Q+ +IK
Sbjct: 139 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 198
Query: 100 EMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 159
E VELPL HP ++ +G+KPP+G++LYGPPGTGKTL+A+AVAN+T A F + G E++ K
Sbjct: 199 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 258
Query: 160 LAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
G+ +R+ F A++++PSI+FIDE+DAI KR
Sbjct: 259 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 69/156 (44%), Positives = 99/156 (63%)
Query: 48 VDTDPA-PYCIVAADTVIHC-------EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIK 99
VD D P C V + +H + DP+ + E + Y DIGG Q+ +IK
Sbjct: 139 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 198
Query: 100 EMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 159
E VELPL HP ++ +G+KPP+G++LYGPPGTGKTL+A+AVAN+T A F + G E++ K
Sbjct: 199 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 258
Query: 160 LAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
G+ +R+ F A++++PSI+FIDE+DAI KR
Sbjct: 259 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 69/156 (44%), Positives = 99/156 (63%)
Query: 48 VDTDPA-PYCIVAADTVIHC-------EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIK 99
VD D P C V + +H + DP+ + E + Y DIGG Q+ +IK
Sbjct: 139 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 198
Query: 100 EMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 159
E VELPL HP ++ +G+KPP+G++LYGPPGTGKTL+A+AVAN+T A F + G E++ K
Sbjct: 199 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 258
Query: 160 LAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
G+ +R+ F A++++PSI+FIDE+DAI KR
Sbjct: 259 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 66/138 (47%), Positives = 92/138 (66%)
Query: 58 VAADTVIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGV 117
VA V+ + DP+ + + S Y DIGG Q+ +IKE VELPL HP L++ +G+
Sbjct: 158 VAVVGVLQDDADPMVSVMKLDKSPTESYADIGGLESQIQEIKESVELPLTHPELYEEMGI 217
Query: 118 KPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADK 177
KPP+G++LYG PGTGKTL+A+AVAN+T A F I G E++ K G+ R+ F+ A
Sbjct: 218 KPPKGVILYGAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAAD 277
Query: 178 NSPSIIFIDELDAIAPKR 195
++PSI+FIDE+DAI KR
Sbjct: 278 HAPSIVFIDEIDAIGTKR 295
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 68/156 (43%), Positives = 99/156 (63%)
Query: 48 VDTDPA-PYCIVAADTVIHC-------EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIK 99
VD D P C V + +H + DP+ + E + Y DIGG Q+ +IK
Sbjct: 138 VDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIK 197
Query: 100 EMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 159
E VELPL HP ++ +G+KPP+G++LYGPPGTGKTL+A+AVAN+T A F + G E++ K
Sbjct: 198 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 257
Query: 160 LAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
G+ +R+ F A++++PSI+FIDE+DA+ KR
Sbjct: 258 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKR 293
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 69/156 (44%), Positives = 98/156 (62%)
Query: 48 VDTDPA-PYCIVAADTVIHC-------EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIK 99
VD D P C V + +H + DP+ + E + Y DIGG Q+ +IK
Sbjct: 139 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIK 198
Query: 100 EMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 159
E VELPL HP ++ +G+KPP+G++LYGPPGTGKTL+A+AVAN+T A F + G E++ K
Sbjct: 199 ESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSELIQK 258
Query: 160 LAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
G+ +R+ F A+++ PSI+FIDE+DAI KR
Sbjct: 259 YLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKR 294
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 62/127 (48%), Positives = 89/127 (70%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP+ + + + Y DIGG Q+ +IKE VELPL HP L++ +G+KPP+G++LYG
Sbjct: 174 DPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGA 233
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL+A+AVAN+T A F + G E++ K G+ +R+ F A+++SPSI+FIDE+
Sbjct: 234 PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSIVFIDEI 293
Query: 189 DAIAPKR 195
DAI KR
Sbjct: 294 DAIGTKR 300
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 61/129 (47%), Positives = 90/129 (69%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ + + + Y DIGG Q+ +++E VELPL HP L++ +G+KPP+G++LY
Sbjct: 185 ESDPLVSVMKLDKAPTESYADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILY 244
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
G PGTGKTL+A+AVAN+T A F I G E++ K G+ +R+ F+ A +++PSI+FID
Sbjct: 245 GAPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFID 304
Query: 187 ELDAIAPKR 195
E+DAI KR
Sbjct: 305 EIDAIGTKR 313
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 64/113 (56%), Positives = 80/113 (70%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V Y+DIGGC Q +I+E VELPL H L+K IG+ PPRG+LLYGPPGTGKT++A+AVAN
Sbjct: 152 VSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAN 211
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
T A F + G E + K GE +R F A +N+P+IIFIDE+DAIA R
Sbjct: 212 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATAR 264
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 68/156 (43%), Positives = 98/156 (62%)
Query: 48 VDTDPA-PYCIVAADTVIHC-------EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIK 99
VD D P C V + +H + DP+ + E + Y DIGG Q+ +IK
Sbjct: 139 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDSQIQEIK 198
Query: 100 EMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 159
E VELPL HP ++ +G+KPP+G++LYG PGTGKTL+A+AVAN+T A F + G E++ K
Sbjct: 199 ESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQK 258
Query: 160 LAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
G+ +R+ F A++++PSI+FIDE+DAI KR
Sbjct: 259 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 68/156 (43%), Positives = 98/156 (62%)
Query: 48 VDTDPA-PYCIVAADTVIHC-------EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIK 99
VD D P C V + +H + DP+ + E + Y DIGG Q+ +IK
Sbjct: 139 VDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIK 198
Query: 100 EMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSK 159
E VELPL HP ++ +G+KPP+G++LYG PGTGKTL+A+AVAN+T A F + G E++ K
Sbjct: 199 ESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQK 258
Query: 160 LAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
G+ +R+ F A++++PSI+FIDE+DAI KR
Sbjct: 259 YLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR 294
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 64/113 (56%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V Y D+GG Q +I+E VELPL H L+K IG+ PPRG+LLYGPPGTGKT++ +AVAN
Sbjct: 163 VTYADVGGLDMQKQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 222
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
T A F +NG E + K GE +R F A +NSP+IIFIDE+DAIA KR
Sbjct: 223 STTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKR 275
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 61/133 (45%), Positives = 92/133 (69%)
Query: 63 VIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRG 122
V+ + DP+ + E + Y D+GG +Q+ +IKE VELPL HP ++ +G++PP+G
Sbjct: 165 VLSDDTDPMVSVMKLEKAPQETYADVGGLDQQIQEIKEAVELPLTHPEYYEEMGIRPPKG 224
Query: 123 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSI 182
++LYG PGTGKTL+A+AVAN+T A F I G E++ K G+ +R+ F A++N+PSI
Sbjct: 225 VILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRELFRVAEENAPSI 284
Query: 183 IFIDELDAIAPKR 195
+FIDE+DA+ KR
Sbjct: 285 VFIDEIDAVGTKR 297
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 333 (122.3 bits), Expect = 3.6e-29, P = 3.6e-29
Identities = 68/149 (45%), Positives = 89/149 (59%)
Query: 48 VDTDPAPYCIVAADTVIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLR 107
V T PY ++ R + + YD +GG KQ+ +K +ELPL
Sbjct: 191 VHTVSPPYLFSPTTSINVATSSFPARSKYPNLPQQITYDQVGGLSKQIELLKSTIELPLN 250
Query: 108 HPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANE-TGAFFFLINGPEIMSKLAGESES 166
+P+LF G+ PPRGILL+GPPGTGKT++ R VAN T A INGP I+SK GE+E+
Sbjct: 251 NPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVANSITEAHVLTINGPSIVSKYLGETEN 310
Query: 167 NLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+R F EA K PSIIF+DE+D+IAP R
Sbjct: 311 AIRDIFNEAKKFQPSIIFMDEIDSIAPSR 339
Score = 288 (106.4 bits), Expect = 2.5e-24, P = 2.5e-24
Identities = 67/159 (42%), Positives = 89/159 (55%)
Query: 40 MRAVEFKIVDTDPAPYCIVAADTVIHC--EGDPIKREEEEEASNAVGYDDIGGCRKQLAQ 97
M+A+ + P V D V H E P E V + DIGG + +
Sbjct: 451 MKAINRGLTVGIPQTAIKVTVDDVYHALPEIRPSAMREIFLEMPKVHWSDIGGQEELKRK 510
Query: 98 IKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIM 157
+ E+V+LPL FK +GV P+G+LLYGPPG KTL A+A+A E+G F + GPEI
Sbjct: 511 LIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVKGPEIF 570
Query: 158 SKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKRE 196
+K GESE +R+ F +A SPSIIF DE+DAIA R+
Sbjct: 571 NKYVGESERAIREIFRKARAASPSIIFFDEIDAIAGDRD 609
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 65/119 (54%), Positives = 79/119 (66%)
Query: 77 EEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLI 136
E+ V Y D+GG Q +IKE VELPL L+ IG+ PPRG+LLYGPPGTGKT++
Sbjct: 146 EDQKPDVTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTML 205
Query: 137 ARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+AVAN T A F ING E + K GE +R F A +NSP+IIFIDE+DAIA KR
Sbjct: 206 VKAVANSTTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKR 264
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 65/119 (54%), Positives = 79/119 (66%)
Query: 77 EEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLI 136
E+ V Y D+GG Q +IKE VELPL L+ IG+ PPRG+LLYGPPGTGKT++
Sbjct: 146 EDQKPDVTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTML 205
Query: 137 ARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+AVAN T A F ING E + K GE +R F A +NSP+IIFIDE+DAIA KR
Sbjct: 206 VKAVANSTTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKR 264
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 332 (121.9 bits), Expect = 4.8e-29, P = 4.8e-29
Identities = 62/113 (54%), Positives = 80/113 (70%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
+ Y +GG K++ +K +E+PL P+LF + GV PPRGILL+GPPGTGKT++ R VAN
Sbjct: 242 LSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVAN 301
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+ A INGP I+SK GE+E+ LR F EA K PSIIFIDE+D+IAP R
Sbjct: 302 TSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNR 354
Score = 291 (107.5 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 54/114 (47%), Positives = 77/114 (67%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V + DIGG + ++KEM++LPL F +G+ P+G+LLYGPPG KTL A+A+A
Sbjct: 513 VYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLLYGPPGCSKTLTAKALAT 572
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKRE 196
E+G F + GPEI +K GESE +R+ F +A +PSIIF DE+DA++P R+
Sbjct: 573 ESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFFDEIDALSPDRD 626
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 73/149 (48%), Positives = 96/149 (64%)
Query: 47 IVDTDPAPYCIVAADTVIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPL 106
+VDT P P +D+ IH G +E+ S + Y DIGG Q +++E VELPL
Sbjct: 124 LVDTLP-P----ESDSSIHLLG------ADEKPSES--YSDIGGGDIQKQEMREAVELPL 170
Query: 107 RHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 166
H +L+K IG+ PPRG+LLYGPPGTGKT++A+AVA+ T A F + G E + K GE
Sbjct: 171 THHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPR 230
Query: 167 NLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+R F A +NSP+IIFIDE+DAIA KR
Sbjct: 231 LVRDVFRLARENSPAIIFIDEIDAIATKR 259
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 73/175 (41%), Positives = 106/175 (60%)
Query: 28 VHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAA--DT-VIHC----EGDPIKREEEEEAS 80
VH + F+V V+ I D P C VA D+ +H + DP+ E
Sbjct: 95 VHPEGKFVVD-----VDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 149
Query: 81 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAV 140
Y+ IGG KQ+ +IKE++ELP++HP LF+A+G+ P+G+LLYGPPGTGKTL+ARAV
Sbjct: 150 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 209
Query: 141 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A+ T F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I R
Sbjct: 210 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 264
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 73/175 (41%), Positives = 106/175 (60%)
Query: 28 VHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAA--DT-VIHC----EGDPIKREEEEEAS 80
VH + F+V V+ I D P C VA D+ +H + DP+ E
Sbjct: 89 VHPEGKFVVD-----VDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 81 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAV 140
Y+ IGG KQ+ +IKE++ELP++HP LF+A+G+ P+G+LLYGPPGTGKTL+ARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 141 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A+ T F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I R
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
>UNIPROTKB|E2RM61 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074947
EMBL:AAEX03006359 ProteinModelPortal:E2RM61 PRIDE:E2RM61
Ensembl:ENSCAFT00000020231 OMA:DSNCELQ NextBio:20855489
Uniprot:E2RM61
Length = 251
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 73/175 (41%), Positives = 106/175 (60%)
Query: 28 VHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAA--DT-VIHC----EGDPIKREEEEEAS 80
VH + F+V V+ I D P C VA D+ +H + DP+ E
Sbjct: 40 VHPEGKFVVD-----VDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 94
Query: 81 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAV 140
Y+ IGG KQ+ +IKE++ELP++HP LF+A+G+ P+G+LLYGPPGTGKTL+ARAV
Sbjct: 95 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 154
Query: 141 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A+ T F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I R
Sbjct: 155 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 209
>UNIPROTKB|J3QQM1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AC015651 ChiTaRS:PSMC5
HGNC:HGNC:9552 Ensembl:ENST00000582130 Uniprot:J3QQM1
Length = 263
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 70/163 (42%), Positives = 103/163 (63%)
Query: 40 MRAVEFKIVDTDPAPYCIVAA--DT-VIHC----EGDPIKREEEEEASNAVGYDDIGGCR 92
+RA++ K V P C VA D+ +H + DP+ E Y+ IGG
Sbjct: 77 VRAMDKKKVLVKVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLD 136
Query: 93 KQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLIN 152
KQ+ +IKE++ELP++HP LF+A+G+ P+G+LLYGPPGTGKTL+ARAVA+ T F ++
Sbjct: 137 KQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVS 196
Query: 153 GPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
G E++ K GE +R+ F A +++PSIIF+DE+D+I R
Sbjct: 197 GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 239
>UNIPROTKB|J3QSA9 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552 Ensembl:ENST00000585123
Uniprot:J3QSA9
Length = 257
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 73/175 (41%), Positives = 106/175 (60%)
Query: 28 VHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAA--DT-VIHC----EGDPIKREEEEEAS 80
VH + F+V V+ I D P C VA D+ +H + DP+ E
Sbjct: 81 VHPEGKFVVD-----VDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 135
Query: 81 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAV 140
Y+ IGG KQ+ +IKE++ELP++HP LF+A+G+ P+G+LLYGPPGTGKTL+ARAV
Sbjct: 136 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 195
Query: 141 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A+ T F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I R
Sbjct: 196 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 250
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 73/175 (41%), Positives = 106/175 (60%)
Query: 28 VHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAA--DT-VIHC----EGDPIKREEEEEAS 80
VH + F+V V+ I D P C VA D+ +H + DP+ E
Sbjct: 89 VHPEGKFVVD-----VDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 81 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAV 140
Y+ IGG KQ+ +IKE++ELP++HP LF+A+G+ P+G+LLYGPPGTGKTL+ARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 141 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A+ T F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I R
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 73/175 (41%), Positives = 106/175 (60%)
Query: 28 VHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAA--DT-VIHC----EGDPIKREEEEEAS 80
VH + F+V V+ I D P C VA D+ +H + DP+ E
Sbjct: 89 VHPEGKFVVD-----VDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 81 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAV 140
Y+ IGG KQ+ +IKE++ELP++HP LF+A+G+ P+G+LLYGPPGTGKTL+ARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 141 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A+ T F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I R
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 73/175 (41%), Positives = 106/175 (60%)
Query: 28 VHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAA--DT-VIHC----EGDPIKREEEEEAS 80
VH + F+V V+ I D P C VA D+ +H + DP+ E
Sbjct: 89 VHPEGKFVVD-----VDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 81 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAV 140
Y+ IGG KQ+ +IKE++ELP++HP LF+A+G+ P+G+LLYGPPGTGKTL+ARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 141 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A+ T F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I R
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 73/175 (41%), Positives = 106/175 (60%)
Query: 28 VHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAA--DT-VIHC----EGDPIKREEEEEAS 80
VH + F+V V+ I D P C VA D+ +H + DP+ E
Sbjct: 97 VHPEGKFVVD-----VDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 151
Query: 81 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAV 140
Y+ IGG KQ+ +IKE++ELP++HP LF+A+G+ P+G+LLYGPPGTGKTL+ARAV
Sbjct: 152 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 211
Query: 141 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A+ T F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I R
Sbjct: 212 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 266
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 73/175 (41%), Positives = 106/175 (60%)
Query: 28 VHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAA--DT-VIHC----EGDPIKREEEEEAS 80
VH + F+V V+ I D P C VA D+ +H + DP+ E
Sbjct: 89 VHPEGKFVVD-----VDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 81 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAV 140
Y+ IGG KQ+ +IKE++ELP++HP LF+A+G+ P+G+LLYGPPGTGKTL+ARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 141 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A+ T F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I R
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 73/175 (41%), Positives = 106/175 (60%)
Query: 28 VHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAA--DT-VIHC----EGDPIKREEEEEAS 80
VH + F+V V+ I D P C VA D+ +H + DP+ E
Sbjct: 89 VHPEGKFVVD-----VDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 81 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAV 140
Y+ IGG KQ+ +IKE++ELP++HP LF+A+G+ P+G+LLYGPPGTGKTL+ARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 141 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A+ T F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I R
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 73/175 (41%), Positives = 106/175 (60%)
Query: 28 VHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAA--DT-VIHC----EGDPIKREEEEEAS 80
VH + F+V V+ I D P C VA D+ +H + DP+ E
Sbjct: 89 VHPEGKFVVD-----VDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 143
Query: 81 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAV 140
Y+ IGG KQ+ +IKE++ELP++HP LF+A+G+ P+G+LLYGPPGTGKTL+ARAV
Sbjct: 144 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 203
Query: 141 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A+ T F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I R
Sbjct: 204 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 258
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 328 (120.5 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 63/114 (55%), Positives = 82/114 (71%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
+ + IGG Q+ QI+E+++L L K+ GVKPP+GILLYGPPGTGKTL+AR VA
Sbjct: 309 LNFQSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGTGKTLLARIVAT 368
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKRE 196
+T A F ING +I+ K G +E L+K F++A + SPSIIFIDELDA+ PKRE
Sbjct: 369 QTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDALCPKRE 422
Score = 303 (111.7 bits), Expect = 8.2e-26, P = 8.2e-26
Identities = 57/113 (50%), Positives = 80/113 (70%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V + DIGG ++KE +E PL++P F +G+KPP+GILLYGPPG KTL+A+A+A
Sbjct: 619 VFWGDIGGQEHIKQKLKEAIEWPLKYPQSFIRMGIKPPKGILLYGPPGCSKTLLAKALAT 678
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E+G F + GPE++SK GESE +R F++A +NSPSI+F DE+D +A R
Sbjct: 679 ESGLNFIAVKGPELLSKWVGESERAVRDIFKKARQNSPSILFFDEIDGLAISR 731
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 56/111 (50%), Positives = 83/111 (74%)
Query: 85 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 144
YD +GG KQ+ +IKE++ELP++HP LF+++G+ P+G+LLYGPPGTGKTL+ARAVA+ T
Sbjct: 144 YDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 203
Query: 145 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I R
Sbjct: 204 DCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSR 254
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 57/111 (51%), Positives = 83/111 (74%)
Query: 85 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 144
Y+ IGG KQ+ +IKE++ELP++HP LF+A+G+ P+G+LLYGPPGTGKTL+ARAVA+ T
Sbjct: 156 YEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 215
Query: 145 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I R
Sbjct: 216 DCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 266
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 55/111 (49%), Positives = 80/111 (72%)
Query: 85 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 144
+DDIGGC Q+ ++KE VELPL HP ++ +G+ P+G++LYG PGTGKTL+A+AVAN T
Sbjct: 182 FDDIGGCESQIQELKESVELPLTHPEYYEEMGITAPKGVILYGEPGTGKTLLAKAVANST 241
Query: 145 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A F G +++ K +GE +R+ F+ A + +PSI+FIDE+DA+ KR
Sbjct: 242 SATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFIDEIDAVGTKR 292
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 62/113 (54%), Positives = 78/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
+ Y DIGG Q +I+E VELPL H L+K IG+ PPRG+LL+GPPG GKT++A+AVA+
Sbjct: 149 ISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAH 208
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
T A F + G E + K GE +R F A +NSPSIIFIDE+DAIA KR
Sbjct: 209 HTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKR 261
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 60/133 (45%), Positives = 91/133 (68%)
Query: 63 VIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRG 122
V+ + DP+ + E YD IGG +Q+ +IKE++ELP++HP LF+++G+ P+G
Sbjct: 138 VLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKG 197
Query: 123 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSI 182
+LLYGPPGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A +++PSI
Sbjct: 198 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 257
Query: 183 IFIDELDAIAPKR 195
IF+DE+D+I R
Sbjct: 258 IFMDEIDSIGSAR 270
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 60/133 (45%), Positives = 91/133 (68%)
Query: 63 VIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRG 122
V+ + DP+ + E YD IGG +Q+ +IKE++ELP++HP LF+++G+ P+G
Sbjct: 138 VLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKG 197
Query: 123 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSI 182
+LLYGPPGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A +++PSI
Sbjct: 198 VLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 257
Query: 183 IFIDELDAIAPKR 195
IF+DE+D+I R
Sbjct: 258 IFMDEIDSIGSAR 270
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 74/187 (39%), Positives = 109/187 (58%)
Query: 20 YFLEAYRPVHKDDLFI-VRG-GMRAVEF-KIVD-TDPAPYCIVAADT---VIHC----EG 68
Y E +P+ K + + V G V+ K +D D P C VA +H +
Sbjct: 71 YVGEVVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKV 130
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP+ E Y+ +GG KQ+ +IKE++ELP++HP LF A+G+ P+G+LLYGP
Sbjct: 131 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGP 190
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A +++PSIIF+DE+
Sbjct: 191 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEI 250
Query: 189 DAIAPKR 195
D+I R
Sbjct: 251 DSIGSSR 257
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 56/111 (50%), Positives = 83/111 (74%)
Query: 85 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 144
Y+ +GG KQ+ +IKE++ELP++HP LF+++G+ P+GILLYGPPGTGKTL+ARAVA+ T
Sbjct: 144 YEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVAHHT 203
Query: 145 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I R
Sbjct: 204 DCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR 254
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 59/133 (44%), Positives = 90/133 (67%)
Query: 63 VIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRG 122
V+ + DP+ E YD +GG KQ+ +IKE++ELP++HP LF+++G+ P+G
Sbjct: 125 VLENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKG 184
Query: 123 ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSI 182
++LYGPPGTGKTL+ARAVA+ T F ++G E++ K GE +R+ F A +++PSI
Sbjct: 185 VILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSI 244
Query: 183 IFIDELDAIAPKR 195
IF+DE+D+I R
Sbjct: 245 IFMDEIDSIGSTR 257
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 55/111 (49%), Positives = 83/111 (74%)
Query: 85 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 144
YD +GG KQ+ +IKE++ELP++HP LF+++G+ P+G++LYGPPGTGKTL+ARAVA+ T
Sbjct: 143 YDMVGGLDKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVAHHT 202
Query: 145 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I R
Sbjct: 203 ECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR 253
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 56/111 (50%), Positives = 82/111 (73%)
Query: 85 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 144
Y+ +GG KQ+ +IKE++ELP++HP LF A+G+ P+G+LLYGPPGTGKTL+ARAVA+ T
Sbjct: 142 YEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARAVAHHT 201
Query: 145 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I R
Sbjct: 202 ECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSAR 252
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 60/113 (53%), Positives = 77/113 (68%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
+ Y DIGG Q +++E VELPL H L++ IG+ PPRG+L+YGPPG GKT++A+AVA
Sbjct: 158 ISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAA 217
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
T A F + G E + K GE +R F A +NSPSIIFIDE+DAIA KR
Sbjct: 218 NTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKR 270
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 322 (118.4 bits), Expect = 5.7e-28, P = 5.7e-28
Identities = 57/125 (45%), Positives = 86/125 (68%)
Query: 72 KREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGT 131
K E E + + DIGG + ++ E+V +P++HP +++ G+ PPRG+LL+GPPG
Sbjct: 160 KAEANREPPSDISLSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGC 219
Query: 132 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAI 191
GKT++A A+ANE G F I+ P I+S ++GESE +R+ FEEA +P ++FIDE+DA+
Sbjct: 220 GKTMLANALANELGVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAV 279
Query: 192 APKRE 196
PKRE
Sbjct: 280 TPKRE 284
Score = 285 (105.4 bits), Expect = 5.5e-24, P = 5.5e-24
Identities = 52/127 (40%), Positives = 83/127 (65%)
Query: 70 PIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPP 129
P + E V +++IG + +++ + P++ P L++++G+ P G+LL+GPP
Sbjct: 476 PSSKREGFATVPGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPP 535
Query: 130 GTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELD 189
G GKTL+A+AVANE+ A F I GPE+++K GESE +R+ F A +SP +IF DELD
Sbjct: 536 GCGKTLLAKAVANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELD 595
Query: 190 AIAPKRE 196
A+ P+R+
Sbjct: 596 AMVPRRD 602
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 67/134 (50%), Positives = 87/134 (64%)
Query: 63 VIHCEGDP-IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPR 121
++ E D I+ + E N V Y D+GG Q ++KE VELPL P L++ IG++PP
Sbjct: 115 ILPSESDSSIQLLQITERPN-VKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPM 173
Query: 122 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPS 181
GIL+YGPPGTGKT++ +AVANET F + G E + K GE +R F A +NSPS
Sbjct: 174 GILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPS 233
Query: 182 IIFIDELDAIAPKR 195
IIFIDE+DAIA KR
Sbjct: 234 IIFIDEVDAIATKR 247
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 67/134 (50%), Positives = 87/134 (64%)
Query: 63 VIHCEGDP-IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPR 121
++ E D I+ + E N V Y D+GG Q ++KE VELPL P L++ IG++PP
Sbjct: 115 ILPSESDSSIQLLQITERPN-VKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPM 173
Query: 122 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPS 181
GIL+YGPPGTGKT++ +AVANET F + G E + K GE +R F A +NSPS
Sbjct: 174 GILIYGPPGTGKTMLVKAVANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPS 233
Query: 182 IIFIDELDAIAPKR 195
IIFIDE+DAIA KR
Sbjct: 234 IIFIDEVDAIATKR 247
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 61/113 (53%), Positives = 78/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V Y D+GG Q +I+E VELPL L++ IG+ PPRG+LLYGPPGTGKT++ +AVAN
Sbjct: 169 VTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 228
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
T A F +NG E + K GE +R F A +N+PSIIFIDE+D+IA KR
Sbjct: 229 STKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKR 281
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 61/113 (53%), Positives = 78/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V Y DIGG Q +I+E VELPL H L+K IG+ PPRG+L+YGPPG GKT++A+AVA+
Sbjct: 157 VSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 216
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
T A F + G E + K GE +R F A +N+P+IIFIDE+DAIA KR
Sbjct: 217 HTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 269
>GENEDB_PFALCIPARUM|PF13_0063 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory
subunit 7, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511
GO:GO:0017111 EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0005838 KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177
RefSeq:XP_001349843.2 ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3
MINT:MINT-1698409 PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA
GeneID:814041 KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500
Uniprot:Q8IEK3
Length = 420
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 59/127 (46%), Positives = 81/127 (63%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP E + Y+DIGGC++QL +++E+VE+PL P F +G+ PP+G+LLYGP
Sbjct: 145 DPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGP 204
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARA+AN T A F + G E++ K GE +R+ F+ A I+FIDE+
Sbjct: 205 PGTGKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEV 264
Query: 189 DAIAPKR 195
DAI R
Sbjct: 265 DAIGGSR 271
>UNIPROTKB|Q8IEK3 [details] [associations]
symbol:PF13_0063 "26S proteasome regulatory subunit 7,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 GO:GO:0017111
EMBL:AL844509 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0005838
KO:K03061 OMA:DIRWELI ProtClustDB:CLSZ2429177 RefSeq:XP_001349843.2
ProteinModelPortal:Q8IEK3 IntAct:Q8IEK3 MINT:MINT-1698409
PRIDE:Q8IEK3 EnsemblProtists:PF13_0063:mRNA GeneID:814041
KEGG:pfa:PF13_0063 EuPathDB:PlasmoDB:PF3D7_1311500 Uniprot:Q8IEK3
Length = 420
Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 59/127 (46%), Positives = 81/127 (63%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP E + Y+DIGGC++QL +++E+VE+PL P F +G+ PP+G+LLYGP
Sbjct: 145 DPSVTMMTVEEKPDITYNDIGGCKEQLEKLREVVEMPLLQPERFVTLGIDPPKGVLLYGP 204
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARA+AN T A F + G E++ K GE +R+ F+ A I+FIDE+
Sbjct: 205 PGTGKTLTARAIANRTDACFICVIGSELVQKYVGEGARMVRELFQMAKSKKACILFIDEV 264
Query: 189 DAIAPKR 195
DAI R
Sbjct: 265 DAIGGSR 271
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 311 (114.5 bits), Expect = 9.5e-28, P = 9.5e-28
Identities = 72/176 (40%), Positives = 106/176 (60%)
Query: 28 VHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAA--DT-VIHC----EGDPIKREEEEEAS 80
VH + F+V V+ I D P C VA D+ +H + DP+ E
Sbjct: 84 VHPEGKFVVD-----VDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 138
Query: 81 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAV 140
Y+ IGG KQ+ +IKE++ELP++HP F+A+G+ P+G+LLYGPPGTGKTL+ARAV
Sbjct: 139 PDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAV 198
Query: 141 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKRE 196
A+ T F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I + E
Sbjct: 199 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLE 254
>FB|FBgn0028687 [details] [associations]
symbol:Rpt1 "Regulatory particle triple-A ATPase 1"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE013599 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
KO:K03061 OMA:DIRWELI GeneTree:ENSGT00550000074978 HSSP:Q9LCZ4
EMBL:AF145307 EMBL:AY061606 RefSeq:NP_477473.1 UniGene:Dm.3425
SMR:Q7KMQ0 IntAct:Q7KMQ0 STRING:Q7KMQ0 EnsemblMetazoa:FBtr0088947
GeneID:35701 KEGG:dme:Dmel_CG1341 UCSC:CG1341-RA CTD:35701
FlyBase:FBgn0028687 HOGENOM:HOG000237377 InParanoid:Q7KMQ0
OrthoDB:EOG4X3FGQ GenomeRNAi:35701 NextBio:794815 Uniprot:Q7KMQ0
Length = 433
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 59/127 (46%), Positives = 81/127 (63%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP + E V Y D+GGC++Q+ +++E+VE PL HP F +G++PP+G+LL+GP
Sbjct: 158 DPTVTMMQVEDKPDVTYSDVGGCKEQIEKLREVVETPLLHPEKFVNLGIEPPKGVLLFGP 217
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A +IF DE+
Sbjct: 218 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARSKKACLIFFDEI 277
Query: 189 DAIAPKR 195
DAI R
Sbjct: 278 DAIGGAR 284
>UNIPROTKB|E1C4V5 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
EMBL:AADN02036894 EMBL:AADN02036895 IPI:IPI00602342
Ensembl:ENSGALT00000013403 ArrayExpress:E1C4V5 Uniprot:E1C4V5
Length = 424
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 59/127 (46%), Positives = 81/127 (63%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP + E V Y D+GGC++Q+ +++E+VE PL HP F +G++PP+G+LL+GP
Sbjct: 149 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGP 208
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A +IF DE+
Sbjct: 209 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 268
Query: 189 DAIAPKR 195
DAI R
Sbjct: 269 DAIGGAR 275
>UNIPROTKB|F1NFL8 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 OMA:DIRWELI
GeneTree:ENSGT00550000074978 EMBL:AADN02036894 EMBL:AADN02036895
IPI:IPI00821647 Ensembl:ENSGALT00000039595 ArrayExpress:F1NFL8
Uniprot:F1NFL8
Length = 432
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 59/127 (46%), Positives = 81/127 (63%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP + E V Y D+GGC++Q+ +++E+VE PL HP F +G++PP+G+LL+GP
Sbjct: 157 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGP 216
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A +IF DE+
Sbjct: 217 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 276
Query: 189 DAIAPKR 195
DAI R
Sbjct: 277 DAIGGAR 283
>UNIPROTKB|Q5E9F9 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9913 "Bos taurus" [GO:0000932 "cytoplasmic mRNA processing
body" evidence=ISS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 HSSP:Q9WZ49 GO:GO:0000932 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 KO:K03061 OMA:DIRWELI
EMBL:BT020961 EMBL:BC102391 IPI:IPI00693210 RefSeq:NP_001015639.1
UniGene:Bt.24017 ProteinModelPortal:Q5E9F9 SMR:Q5E9F9 PRIDE:Q5E9F9
Ensembl:ENSBTAT00000065774 GeneID:530186 KEGG:bta:530186 CTD:5701
GeneTree:ENSGT00550000074978 OrthoDB:EOG4RXZ05 NextBio:20875201
Uniprot:Q5E9F9
Length = 433
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 59/127 (46%), Positives = 81/127 (63%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP + E V Y D+GGC++Q+ +++E+VE PL HP F +G++PP+G+LL+GP
Sbjct: 158 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGP 217
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A +IF DE+
Sbjct: 218 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 277
Query: 189 DAIAPKR 195
DAI R
Sbjct: 278 DAIGGAR 284
>UNIPROTKB|F1PPH7 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0000502 GO:GO:0006511 TIGRFAMs:TIGR01242 KO:K03061
OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978 EMBL:AAEX03011248
RefSeq:XP_533103.3 ProteinModelPortal:F1PPH7
Ensembl:ENSCAFT00000006754 GeneID:475896 KEGG:cfa:475896
Uniprot:F1PPH7
Length = 433
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 59/127 (46%), Positives = 81/127 (63%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP + E V Y D+GGC++Q+ +++E+VE PL HP F +G++PP+G+LL+GP
Sbjct: 158 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGP 217
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A +IF DE+
Sbjct: 218 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 277
Query: 189 DAIAPKR 195
DAI R
Sbjct: 278 DAIGGAR 284
>UNIPROTKB|B7Z5E2 [details] [associations]
symbol:PSMC2 "cDNA FLJ52353, highly similar to 26S protease
regulatory subunit 7" species:9606 "Homo sapiens" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0030163 GO:GO:0017111 GO:GO:0008233 EMBL:AC004668
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 UniGene:Hs.437366
HGNC:HGNC:9548 ChiTaRS:PSMC2 EMBL:AC093701 EMBL:AK298821
IPI:IPI01015219 SMR:B7Z5E2 STRING:B7Z5E2 Ensembl:ENST00000544811
Uniprot:B7Z5E2
Length = 296
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 59/127 (46%), Positives = 81/127 (63%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP + E V Y D+GGC++Q+ +++E+VE PL HP F +G++PP+G+LL+GP
Sbjct: 21 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGP 80
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A +IF DE+
Sbjct: 81 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 140
Query: 189 DAIAPKR 195
DAI R
Sbjct: 141 DAIGGAR 147
>UNIPROTKB|P35998 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0019048
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0016887
GO:GO:0051436 GO:GO:0000932 EMBL:CH471070 GO:GO:0000216
GO:GO:0000209 GO:GO:0000084 GO:GO:0031145 GO:GO:0051437
EMBL:CH236947 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI CTD:5701 EMBL:D11094
EMBL:AB075520 EMBL:BC002589 IPI:IPI00021435 PIR:S24353
RefSeq:NP_001191382.1 RefSeq:NP_002794.1 UniGene:Hs.437366
ProteinModelPortal:P35998 SMR:P35998 DIP:DIP-27554N IntAct:P35998
MINT:MINT-1163662 STRING:P35998 PhosphoSite:P35998 DMDM:547930
OGP:P35998 REPRODUCTION-2DPAGE:IPI00021435
REPRODUCTION-2DPAGE:P35998 PaxDb:P35998 PeptideAtlas:P35998
PRIDE:P35998 DNASU:5701 Ensembl:ENST00000292644
Ensembl:ENST00000435765 GeneID:5701 KEGG:hsa:5701 UCSC:uc003vbs.3
GeneCards:GC07P102984 HGNC:HGNC:9548 HPA:HPA019238 MIM:154365
neXtProt:NX_P35998 PharmGKB:PA33893 InParanoid:P35998
PhylomeDB:P35998 ChiTaRS:PSMC2 GenomeRNAi:5701 NextBio:22150
ArrayExpress:P35998 Bgee:P35998 CleanEx:HS_PSMC2
Genevestigator:P35998 GermOnline:ENSG00000161057 Uniprot:P35998
Length = 433
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 59/127 (46%), Positives = 81/127 (63%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP + E V Y D+GGC++Q+ +++E+VE PL HP F +G++PP+G+LL+GP
Sbjct: 158 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGP 217
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A +IF DE+
Sbjct: 218 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 277
Query: 189 DAIAPKR 195
DAI R
Sbjct: 278 DAIGGAR 284
>UNIPROTKB|I3LJ30 [details] [associations]
symbol:I3LJ30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
Ensembl:ENSSSCT00000030050 OMA:WDLAYEN Uniprot:I3LJ30
Length = 434
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 59/127 (46%), Positives = 81/127 (63%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP + E V Y D+GGC++Q+ +++E+VE PL HP F +G++PP+G+LL+GP
Sbjct: 159 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGP 218
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A +IF DE+
Sbjct: 219 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 278
Query: 189 DAIAPKR 195
DAI R
Sbjct: 279 DAIGGAR 285
>UNIPROTKB|P46472 [details] [associations]
symbol:psmc2 "26S protease regulatory subunit 7"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:X80157 EMBL:BC054143 PIR:S53709
RefSeq:NP_001084136.1 UniGene:Xl.57157 ProteinModelPortal:P46472
GeneID:399327 KEGG:xla:399327 Xenbase:XB-GENE-1000023
Uniprot:P46472
Length = 433
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 59/127 (46%), Positives = 81/127 (63%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP + E V Y D+GGC++Q+ +++E+VE PL HP F +G++PP+G+LL+GP
Sbjct: 158 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGP 217
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A +IF DE+
Sbjct: 218 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 277
Query: 189 DAIAPKR 195
DAI R
Sbjct: 278 DAIGGAR 284
>UNIPROTKB|Q4R4R0 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9541 "Macaca fascicularis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q9WZ49
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
EMBL:AB169834 ProteinModelPortal:Q4R4R0 SMR:Q4R4R0 PRIDE:Q4R4R0
Uniprot:Q4R4R0
Length = 433
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 59/127 (46%), Positives = 81/127 (63%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP + E V Y D+GGC++Q+ +++E+VE PL HP F +G++PP+G+LL+GP
Sbjct: 158 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGP 217
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A +IF DE+
Sbjct: 218 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 277
Query: 189 DAIAPKR 195
DAI R
Sbjct: 278 DAIGGAR 284
>UNIPROTKB|Q5R8D7 [details] [associations]
symbol:PSMC2 "26S protease regulatory subunit 7"
species:9601 "Pongo abelii" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
GO:GO:0000932 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03061 CTD:5701 EMBL:CR859816 RefSeq:NP_001126144.1
UniGene:Pab.13078 ProteinModelPortal:Q5R8D7 PRIDE:Q5R8D7
GeneID:100173102 KEGG:pon:100173102 InParanoid:Q5R8D7
Uniprot:Q5R8D7
Length = 433
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 59/127 (46%), Positives = 81/127 (63%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP + E V Y D+GGC++Q+ +++E+VE PL HP F +G++PP+G+LL+GP
Sbjct: 158 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGP 217
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A +IF DE+
Sbjct: 218 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 277
Query: 189 DAIAPKR 195
DAI R
Sbjct: 278 DAIGGAR 284
>MGI|MGI:109555 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit,
ATPase 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0017025 "TBP-class protein binding"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:109555 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
OrthoDB:EOG4RXZ05 ChiTaRS:PSMC2 EMBL:AK005083 EMBL:AK168548
EMBL:BC005462 EMBL:U61283 IPI:IPI00270326 PIR:S39349
UniGene:Mm.2462 ProteinModelPortal:P46471 SMR:P46471 IntAct:P46471
STRING:P46471 PhosphoSite:P46471 REPRODUCTION-2DPAGE:P46471
SWISS-2DPAGE:P46471 PaxDb:P46471 PRIDE:P46471 InParanoid:P46471
Bgee:P46471 Genevestigator:P46471 GermOnline:ENSMUSG00000028932
Uniprot:P46471
Length = 433
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 59/127 (46%), Positives = 81/127 (63%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP + E V Y D+GGC++Q+ +++E+VE PL HP F +G++PP+G+LL+GP
Sbjct: 158 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGP 217
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A +IF DE+
Sbjct: 218 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 277
Query: 189 DAIAPKR 195
DAI R
Sbjct: 278 DAIGGAR 284
>ZFIN|ZDB-GENE-040426-1327 [details] [associations]
symbol:psmc2 "proteasome (prosome, macropain) 26S
subunit, ATPase 2" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1327 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03061 OMA:DIRWELI CTD:5701 GeneTree:ENSGT00550000074978
OrthoDB:EOG4RXZ05 HSSP:Q9LCZ4 EMBL:BX571796 EMBL:BC053187
IPI:IPI00491385 RefSeq:NP_957260.1 UniGene:Dr.75589 STRING:Q7T3B1
Ensembl:ENSDART00000019647 GeneID:393941 KEGG:dre:393941
InParanoid:Q7T3B1 NextBio:20814913 Uniprot:Q7T3B1
Length = 433
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 59/127 (46%), Positives = 81/127 (63%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP + E V Y D+GGC++Q+ +++E+VE PL HP F +G++PP+G+LL+GP
Sbjct: 158 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGP 217
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A +IF DE+
Sbjct: 218 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 277
Query: 189 DAIAPKR 195
DAI R
Sbjct: 278 DAIGGAR 284
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 59/113 (52%), Positives = 77/113 (68%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V Y D+GG Q +++E VELPL L++ IG+ PPRG+LLYGPPGTGKT++ +AVAN
Sbjct: 131 VSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 190
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
T A F + G E + K GE +R F A +N+P+IIFIDE+DAIA KR
Sbjct: 191 STAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKR 243
>RGD|3428 [details] [associations]
symbol:Psmc2 "proteasome (prosome, macropain) 26S subunit, ATPase
2" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0017025 "TBP-class protein binding"
evidence=IPI] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA;ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03061
CTD:5701 OrthoDB:EOG4RXZ05 EMBL:D50694 EMBL:BC061542 EMBL:U13895
IPI:IPI00421600 RefSeq:NP_150239.1 UniGene:Rn.1202
ProteinModelPortal:Q63347 IntAct:Q63347 MINT:MINT-1794034
STRING:Q63347 PhosphoSite:Q63347 PRIDE:Q63347 GeneID:25581
KEGG:rno:25581 InParanoid:Q63347 NextBio:607227 Genevestigator:Q63347
GermOnline:ENSRNOG00000012026 Uniprot:Q63347
Length = 433
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 59/127 (46%), Positives = 81/127 (63%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP + E V Y D+GGC++Q+ +++E+VE PL HP F +G++PP+G+LL+GP
Sbjct: 158 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGP 217
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A +IF DE+
Sbjct: 218 PGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 277
Query: 189 DAIAPKR 195
DAI R
Sbjct: 278 DAIGGAR 284
>UNIPROTKB|Q63347 [details] [associations]
symbol:Psmc2 "26S protease regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:3428 GO:GO:0005739 GO:GO:0005524 GO:GO:0005634
GO:GO:0016887 GO:GO:0006511 GO:GO:0000932 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03061 CTD:5701 OrthoDB:EOG4RXZ05
EMBL:D50694 EMBL:BC061542 EMBL:U13895 IPI:IPI00421600
RefSeq:NP_150239.1 UniGene:Rn.1202 ProteinModelPortal:Q63347
IntAct:Q63347 MINT:MINT-1794034 STRING:Q63347 PhosphoSite:Q63347
PRIDE:Q63347 GeneID:25581 KEGG:rno:25581 InParanoid:Q63347
NextBio:607227 Genevestigator:Q63347 GermOnline:ENSRNOG00000012026
Uniprot:Q63347
Length = 433
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 59/127 (46%), Positives = 81/127 (63%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP + E V Y D+GGC++Q+ +++E+VE PL HP F +G++PP+G+LL+GP
Sbjct: 158 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGP 217
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A +IF DE+
Sbjct: 218 PGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 277
Query: 189 DAIAPKR 195
DAI R
Sbjct: 278 DAIGGAR 284
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
Identities = 55/111 (49%), Positives = 82/111 (73%)
Query: 85 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 144
Y+ +GG KQ+ +IKE++ELP++HP LF A+G+ P+G+LL+GPPGTGKTL+ARAVA+ T
Sbjct: 158 YEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVAHHT 217
Query: 145 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I R
Sbjct: 218 ECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 268
>UNIPROTKB|F1SB53 [details] [associations]
symbol:PSMC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074978
OMA:HIFTIHA EMBL:CU570825 Ensembl:ENSSSCT00000016802 Uniprot:F1SB53
Length = 475
Score = 310 (114.2 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 59/127 (46%), Positives = 81/127 (63%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP + E V Y D+GGC++Q+ +++E+VE PL HP F +G++PP+G+LL+GP
Sbjct: 200 DPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGVLLFGP 259
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A +IF DE+
Sbjct: 260 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 319
Query: 189 DAIAPKR 195
DAI R
Sbjct: 320 DAIGGAR 326
>POMBASE|SPBC16C6.07c [details] [associations]
symbol:rpt1 "19S proteasome regulatory subunit Rpt1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16C6.07c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03061
OMA:DIRWELI PIR:T39558 RefSeq:NP_596805.1 ProteinModelPortal:O42931
IntAct:O42931 STRING:O42931 PRIDE:O42931
EnsemblFungi:SPBC16C6.07c.1 GeneID:2539862 KEGG:spo:SPBC16C6.07c
OrthoDB:EOG4B01XN NextBio:20801008 Uniprot:O42931
Length = 438
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 61/127 (48%), Positives = 80/127 (62%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP + E V Y D+GGC++Q+ +++E+VELPL P F +G+ PP+GI+LYGP
Sbjct: 162 DPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGP 221
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A IIF DE+
Sbjct: 222 PGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEI 281
Query: 189 DAIAPKR 195
DAI R
Sbjct: 282 DAIGGAR 288
>TAIR|locus:2024822 [details] [associations]
symbol:RPT1A "regulatory particle triple-A 1A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC009324 EMBL:AC024260
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123390 EMBL:AY062860 EMBL:BT000069 IPI:IPI00548766
PIR:G96577 RefSeq:NP_175778.1 UniGene:At.66918
ProteinModelPortal:Q9SSB5 SMR:Q9SSB5 IntAct:Q9SSB5 STRING:Q9SSB5
PaxDb:Q9SSB5 PRIDE:Q9SSB5 EnsemblPlants:AT1G53750.1 GeneID:841812
KEGG:ath:AT1G53750 GeneFarm:2748 TAIR:At1g53750 InParanoid:Q9SSB5
KO:K03061 OMA:DIRWELI PhylomeDB:Q9SSB5 ProtClustDB:CLSN2682130
Genevestigator:Q9SSB5 GermOnline:AT1G53750 Uniprot:Q9SSB5
Length = 426
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 58/127 (45%), Positives = 81/127 (63%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP E V Y+D+GGC++Q+ +++E+VELP+ HP F +G+ PP+G+L YGP
Sbjct: 151 DPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGP 210
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL+ARAVAN T A F + G E++ K GE +R+ F+ A I+F DE+
Sbjct: 211 PGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEV 270
Query: 189 DAIAPKR 195
DAI R
Sbjct: 271 DAIGGAR 277
>WB|WBGene00004501 [details] [associations]
symbol:rpt-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0016887 GO:GO:0000502 GO:GO:0006511 EMBL:Z78012
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 PIR:T20152
RefSeq:NP_506005.1 ProteinModelPortal:Q18787 SMR:Q18787
IntAct:Q18787 MINT:MINT-212537 STRING:Q18787 PaxDb:Q18787
PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1 EnsemblMetazoa:C52E4.4.2
GeneID:179641 KEGG:cel:CELE_C52E4.4 UCSC:C52E4.4.1 CTD:179641
WormBase:C52E4.4 InParanoid:Q18787 NextBio:906264 Uniprot:Q18787
Length = 435
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 58/127 (45%), Positives = 80/127 (62%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP + E V Y D+GGC+ Q+ +++E+VE PL HP + +G++PP+G+LLYGP
Sbjct: 160 DPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGP 219
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A +IF DE+
Sbjct: 220 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 279
Query: 189 DAIAPKR 195
DA+ R
Sbjct: 280 DAVGGAR 286
>UNIPROTKB|Q18787 [details] [associations]
symbol:rpt-1 "26S protease regulatory subunit 7"
species:6239 "Caenorhabditis elegans" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0016887 GO:GO:0000502
GO:GO:0006511 EMBL:Z78012 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
GeneTree:ENSGT00550000074978 PIR:T20152 RefSeq:NP_506005.1
ProteinModelPortal:Q18787 SMR:Q18787 IntAct:Q18787 MINT:MINT-212537
STRING:Q18787 PaxDb:Q18787 PRIDE:Q18787 EnsemblMetazoa:C52E4.4.1
EnsemblMetazoa:C52E4.4.2 GeneID:179641 KEGG:cel:CELE_C52E4.4
UCSC:C52E4.4.1 CTD:179641 WormBase:C52E4.4 InParanoid:Q18787
NextBio:906264 Uniprot:Q18787
Length = 435
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 58/127 (45%), Positives = 80/127 (62%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP + E V Y D+GGC+ Q+ +++E+VE PL HP + +G++PP+G+LLYGP
Sbjct: 160 DPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGVLLYGP 219
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A +IF DE+
Sbjct: 220 PGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLIFFDEI 279
Query: 189 DAIAPKR 195
DA+ R
Sbjct: 280 DAVGGAR 286
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 56/111 (50%), Positives = 82/111 (73%)
Query: 85 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 144
YD IGG +Q+ +IKE++EL L+HP LF+++G+ P+G+LLYGPPGTGKTL+ARAVA+ T
Sbjct: 131 YDMIGGLDQQIKEIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 190
Query: 145 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I R
Sbjct: 191 DCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR 241
>CGD|CAL0005689 [details] [associations]
symbol:RPT1 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005689 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000078 EMBL:AACQ01000077
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061
RefSeq:XP_715876.1 RefSeq:XP_715926.1 ProteinModelPortal:Q5A2A0
STRING:Q5A2A0 GeneID:3642412 GeneID:3642461 KEGG:cal:CaO19.441
KEGG:cal:CaO19.8071 Uniprot:Q5A2A0
Length = 444
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 62/127 (48%), Positives = 79/127 (62%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP E V Y D+GGC++Q+ +++E+VELPL P F +G+ PP+GILLYGP
Sbjct: 169 DPSVTMMTVEEKPDVTYSDVGGCKEQIEKLREVVELPLLSPERFVKLGIDPPKGILLYGP 228
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A IIF DE+
Sbjct: 229 PGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEV 288
Query: 189 DAIAPKR 195
DAI R
Sbjct: 289 DAIGGAR 295
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 52/111 (46%), Positives = 84/111 (75%)
Query: 85 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 144
Y+ +GG +Q+ ++KE++ELP++HP +F+++G+ P+G+LLYGPPGTGKTL+ARAVA+ T
Sbjct: 178 YEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHT 237
Query: 145 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I +R
Sbjct: 238 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQR 288
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 52/111 (46%), Positives = 84/111 (75%)
Query: 85 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 144
Y+ +GG +Q+ ++KE++ELP++HP +F+++G+ P+G+LLYGPPGTGKTL+ARAVA+ T
Sbjct: 178 YEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHT 237
Query: 145 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I +R
Sbjct: 238 DCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQR 288
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
Identities = 55/111 (49%), Positives = 81/111 (72%)
Query: 85 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 144
Y+ +GG Q+ +IKE++ELP++HP LF A+G+ P+G+LLYGPPGTGKTL+ARAVA+ T
Sbjct: 174 YEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHT 233
Query: 145 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
F ++G E++ K GE +R+ F A +++PSIIF+DE+D+I R
Sbjct: 234 ECTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR 284
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 61/136 (44%), Positives = 90/136 (66%)
Query: 66 CEGDPI------KREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKP 119
CE DP+ ++ E ++N V Y+ IGG +Q+ Q++E+VELP+ +P L+K +G+K
Sbjct: 111 CEVDPLVFNMISDIDKSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKT 170
Query: 120 PRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNS 179
P+G+LLYGPPGTGKTL+ARA+A+ F I I+ K GES +R+ F A ++
Sbjct: 171 PKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQ 230
Query: 180 PSIIFIDELDAIAPKR 195
P IIF+DE+DAI +R
Sbjct: 231 PCIIFMDEIDAIGGRR 246
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 61/136 (44%), Positives = 90/136 (66%)
Query: 66 CEGDPI------KREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKP 119
CE DP+ ++ E ++N V Y+ IGG +Q+ Q++E+VELP+ +P L+K +G+K
Sbjct: 111 CEVDPLVFNMISDIDKSENSTNKVNYNQIGGLSEQIRQMREVVELPILNPYLYKRVGIKT 170
Query: 120 PRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNS 179
P+G+LLYGPPGTGKTL+ARA+A+ F I I+ K GES +R+ F A ++
Sbjct: 171 PKGVLLYGPPGTGKTLLARAMASNINCNFMRIVVSAIVDKYIGESARIIREMFNYAKEHQ 230
Query: 180 PSIIFIDELDAIAPKR 195
P IIF+DE+DAI +R
Sbjct: 231 PCIIFMDEIDAIGGRR 246
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
Identities = 59/111 (53%), Positives = 77/111 (69%)
Query: 85 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 144
Y DIGG Q +++E VELPL H L+K IG+ PPRG+L+YGPPG GKT++A+AVA+ T
Sbjct: 164 YSDIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 223
Query: 145 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A F + G E + K GE +R F A +N+P+IIFIDE+DAIA KR
Sbjct: 224 TAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 274
>SGD|S000001628 [details] [associations]
symbol:RPT1 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IMP] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IDA] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000001628 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:BK006944 GO:GO:0006511 GO:GO:0017111
GO:GO:0045899 GO:GO:0045732 PDB:3VLF PDB:4A3V PDBsum:3VLF
PDBsum:4A3V GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03061
OMA:DIRWELI GeneTree:ENSGT00550000074978 OrthoDB:EOG4B01XN
EMBL:Z22817 EMBL:X73571 EMBL:Z28145 PIR:S34354 RefSeq:NP_012777.1
ProteinModelPortal:P33299 SMR:P33299 DIP:DIP-2883N IntAct:P33299
MINT:MINT-612502 STRING:P33299 SWISS-2DPAGE:P33299 PaxDb:P33299
PeptideAtlas:P33299 PRIDE:P33299 EnsemblFungi:YKL145W GeneID:853712
KEGG:sce:YKL145W CYGD:YKL145w NextBio:974719 Genevestigator:P33299
GermOnline:YKL145W Uniprot:P33299
Length = 467
Score = 307 (113.1 bits), Expect = 3.2e-27, P = 3.2e-27
Identities = 61/127 (48%), Positives = 78/127 (61%)
Query: 69 DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGP 128
DP E V Y D+GGC+ Q+ +++E+VELPL P F +G+ PP+GILLYGP
Sbjct: 192 DPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGP 251
Query: 129 PGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDEL 188
PGTGKTL ARAVAN T A F + G E++ K GE +R+ FE A IIF DE+
Sbjct: 252 PGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEI 311
Query: 189 DAIAPKR 195
DA+ R
Sbjct: 312 DAVGGAR 318
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 60/113 (53%), Positives = 78/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V Y DIGG Q +++E VELPL H L+K IG+ PPRG+L+YGPPG GKT++A+AVA+
Sbjct: 161 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 220
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
T A F + G E + K GE +R F A +N+P+IIFIDE+DAIA KR
Sbjct: 221 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 273
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 60/113 (53%), Positives = 78/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V Y DIGG Q +++E VELPL H L+K IG+ PPRG+L+YGPPG GKT++A+AVA+
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
T A F + G E + K GE +R F A +N+P+IIFIDE+DAIA KR
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 274
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 60/113 (53%), Positives = 78/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V Y DIGG Q +++E VELPL H L+K IG+ PPRG+L+YGPPG GKT++A+AVA+
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
T A F + G E + K GE +R F A +N+P+IIFIDE+DAIA KR
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 274
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 60/113 (53%), Positives = 78/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V Y DIGG Q +++E VELPL H L+K IG+ PPRG+L+YGPPG GKT++A+AVA+
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
T A F + G E + K GE +R F A +N+P+IIFIDE+DAIA KR
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 274
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 60/113 (53%), Positives = 78/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V Y DIGG Q +++E VELPL H L+K IG+ PPRG+L+YGPPG GKT++A+AVA+
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
T A F + G E + K GE +R F A +N+P+IIFIDE+DAIA KR
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 274
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 60/113 (53%), Positives = 78/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V Y DIGG Q +++E VELPL H L+K IG+ PPRG+L+YGPPG GKT++A+AVA+
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
T A F + G E + K GE +R F A +N+P+IIFIDE+DAIA KR
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 274
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 60/113 (53%), Positives = 78/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V Y DIGG Q +++E VELPL H L+K IG+ PPRG+L+YGPPG GKT++A+AVA+
Sbjct: 162 VMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAH 221
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
T A F + G E + K GE +R F A +N+P+IIFIDE+DAIA KR
Sbjct: 222 HTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKR 274
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
Identities = 63/149 (42%), Positives = 92/149 (61%)
Query: 47 IVDTDPAPYCIVAADTVIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPL 106
+V + Y I+ DT+ +K E +E Y+DIGG KQ+ ++ E + LP+
Sbjct: 135 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPM 191
Query: 107 RHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 166
H F+ +GV+PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 192 THKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 251
Query: 167 NLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+R AF+ A + +P IIFIDE+DAI KR
Sbjct: 252 LVRDAFQLAKEKAPCIIFIDEIDAIGTKR 280
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 57/129 (44%), Positives = 85/129 (65%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ + +D IGG +Q+ +++E++ELPL++P +F+ +G+KPP+G+LLY
Sbjct: 162 ETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLY 221
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+A+AVA GA F I+ K GES +R+ F A ++ P IIF+D
Sbjct: 222 GPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAYAKEHEPCIIFMD 281
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 282 EVDAIGGRR 290
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 57/129 (44%), Positives = 84/129 (65%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ + E + Y D+GG +Q+ +++E+VELPL +P LFK +G+ PP+G LL+
Sbjct: 131 EVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLF 190
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARAVA++ F + I+ K GES +R+ F A + P I+F+D
Sbjct: 191 GPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMD 250
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 251 EIDAIGGRR 259
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 57/129 (44%), Positives = 84/129 (65%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ + E + Y D+GG +Q+ +++E+VELPL +P LFK +G+ PP+G LL+
Sbjct: 131 EVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLF 190
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARAVA++ F + I+ K GES +R+ F A + P I+F+D
Sbjct: 191 GPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMD 250
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 251 EIDAIGGRR 259
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 304 (112.1 bits), Expect = 4.5e-27, P = 4.5e-27
Identities = 58/129 (44%), Positives = 84/129 (65%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E +V Y +IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 114 EVDPLVYNMSHEDPGSVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLY 173
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARAVA++ F + I+ K GES +R+ F A + P IIF+D
Sbjct: 174 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMD 233
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 234 EIDAIGGRR 242
>DICTYBASE|DDB_G0276917 [details] [associations]
symbol:psmC2 "26S proteasome ATPase 2 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0000502
"proteasome complex" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0276917 GO:GO:0005524 GO:GO:0005634 GO:GO:0045335
GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0000502 GO:GO:0006511
HSSP:Q9WZ49 EMBL:AAFI02000019 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03061 RefSeq:XP_642830.1 ProteinModelPortal:Q86JA1
STRING:Q86JA1 PRIDE:Q86JA1 EnsemblProtists:DDB0232966
GeneID:8620693 KEGG:ddi:DDB_G0276917 OMA:HIFTIHA
ProtClustDB:CLSZ2429177 Uniprot:Q86JA1
Length = 428
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 55/113 (48%), Positives = 76/113 (67%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
+ Y D+GGC++Q+ +++E+VE+PL HP F +G+ PP+G+L+YGPPGTGKTL ARAVAN
Sbjct: 167 ITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGVLMYGPPGTGKTLCARAVAN 226
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
T A F + G E++ K GE +R F+ A IIF DE+DAI R
Sbjct: 227 RTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACIIFFDEVDAIGGAR 279
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
Identities = 63/149 (42%), Positives = 91/149 (61%)
Query: 47 IVDTDPAPYCIVAADTVIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPL 106
+V + Y I+ DT+ +K E +E Y+DIGG KQ+ ++ E + LP+
Sbjct: 134 LVGVNKDSYLIL--DTLPSEYDSRVKAMEVDEKPTE-DYNDIGGLEKQIQELVEAIVLPM 190
Query: 107 RHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 166
H F+ +G++PP+G+LLYGPPGTGKTL+ARA A +T A F + GP+++ G+
Sbjct: 191 THKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAK 250
Query: 167 NLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+R AF A + SP IIFIDE+DAI KR
Sbjct: 251 LVRDAFLLAKEKSPCIIFIDEIDAIGTKR 279
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 68/170 (40%), Positives = 101/170 (59%)
Query: 30 KDDLFI-VRGGMRAVEFK---IVDTDPAPYCIVAADTVIHCEGDPIKREEEEEASNAVGY 85
+ +F+ V G + A E K +V + Y I+ D + + +K E E + Y
Sbjct: 129 RQTIFLPVPGLIDASELKPGDLVGVNKDSYLII--DKLPQEYDNRVKAMEVIEKPSE-DY 185
Query: 86 DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETG 145
DIGG KQ+ + E + LP+ H F+ IG+KPP+G+L++GPPGTGKTL+ARA A++T
Sbjct: 186 SDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTN 245
Query: 146 AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A F + GP+++ G+ +R AF A + +P+IIFIDELDAI KR
Sbjct: 246 ATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKR 295
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 58/129 (44%), Positives = 83/129 (64%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E V Y +IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 128 EVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLY 187
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARAVA++ F + I+ K GES +R+ F A + P IIF+D
Sbjct: 188 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMD 247
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 248 EIDAIGGRR 256
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 58/129 (44%), Positives = 83/129 (64%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E V Y +IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 114 EVDPLVYNMSHEDPGDVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLY 173
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARAVA++ F + I+ K GES +R+ F A + P IIF+D
Sbjct: 174 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMD 233
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 234 EIDAIGGRR 242
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 58/129 (44%), Positives = 83/129 (64%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E V Y +IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 114 EVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLY 173
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARAVA++ F + I+ K GES +R+ F A + P IIF+D
Sbjct: 174 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMD 233
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 234 EIDAIGGRR 242
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 58/129 (44%), Positives = 83/129 (64%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E V Y +IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 114 EVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLY 173
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARAVA++ F + I+ K GES +R+ F A + P IIF+D
Sbjct: 174 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMD 233
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 234 EIDAIGGRR 242
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 58/129 (44%), Positives = 83/129 (64%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E V Y +IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 120 EVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLY 179
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARAVA++ F + I+ K GES +R+ F A + P IIF+D
Sbjct: 180 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMD 239
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 240 EIDAIGGRR 248
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 58/129 (44%), Positives = 83/129 (64%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E V Y +IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 114 EVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLY 173
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARAVA++ F + I+ K GES +R+ F A + P IIF+D
Sbjct: 174 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMD 233
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 234 EIDAIGGRR 242
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 58/129 (44%), Positives = 83/129 (64%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E V Y +IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 128 EVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLY 187
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARAVA++ F + I+ K GES +R+ F A + P IIF+D
Sbjct: 188 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMD 247
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 248 EIDAIGGRR 256
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 58/129 (44%), Positives = 83/129 (64%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E V Y +IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 114 EVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLY 173
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARAVA++ F + I+ K GES +R+ F A + P IIF+D
Sbjct: 174 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMD 233
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 234 EIDAIGGRR 242
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 68/170 (40%), Positives = 101/170 (59%)
Query: 30 KDDLFI-VRGGMRAVEFK---IVDTDPAPYCIVAADTVIHCEGDPIKREEEEEASNAVGY 85
+ +F+ V G + A E K +V + Y I+ D + + +K E E + Y
Sbjct: 129 RQTIFLPVPGLIDASELKPGDLVGVNKDSYLII--DKLPQEYDNRVKAMEVIEKPSE-DY 185
Query: 86 DDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETG 145
DIGG KQ+ + E + LP+ H F+ IG+KPP+G+L++GPPGTGKTL+ARA A++T
Sbjct: 186 SDIGGLDKQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHGPPGTGKTLLARACASQTN 245
Query: 146 AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
A F + GP+++ G+ +R AF A + +P+IIFIDELDAI KR
Sbjct: 246 ATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDELDAIGTKR 295
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 58/129 (44%), Positives = 83/129 (64%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E V Y +IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 114 EVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLY 173
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARAVA++ F + I+ K GES +R+ F A + P IIF+D
Sbjct: 174 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMD 233
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 234 EIDAIGGRR 242
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 56/129 (43%), Positives = 84/129 (65%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E + + +GG +Q+ +++E++ELPL++P LF +G+KPP+G+LLY
Sbjct: 113 EVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLY 172
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARAVA G F + I+ K GES +R+ F A ++ P +IF+D
Sbjct: 173 GPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCVIFMD 232
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 233 EIDAIGGRR 241
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 58/129 (44%), Positives = 83/129 (64%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E V Y +IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 106 EVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLY 165
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARAVA++ F + I+ K GES +R+ F A + P IIF+D
Sbjct: 166 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMD 225
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 226 EIDAIGGRR 234
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 58/129 (44%), Positives = 83/129 (64%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E V Y +IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 128 EVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLY 187
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARAVA++ F + I+ K GES +R+ F A + P IIF+D
Sbjct: 188 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMD 247
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 248 EIDAIGGRR 256
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
Identities = 57/129 (44%), Positives = 84/129 (65%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E + + IGG Q+ +++E++ELPL++P LF+ +G+KPP+G+LLY
Sbjct: 118 EVDPLVYNMSLEDPGQINFAGIGGLNDQIRELREVIELPLKNPELFQRVGIKPPKGVLLY 177
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARAVA+ F + I+ K GES +R+ F A ++ P IIF+D
Sbjct: 178 GPPGTGKTLLARAVASSMETNFLKVVSSAIVDKYIGESARLIREMFGYAKEHEPCIIFMD 237
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 238 EIDAIGGRR 246
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 57/129 (44%), Positives = 84/129 (65%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ + ++ IGG +Q+ +++E++ELPL++P LF +G+KPP+G+LLY
Sbjct: 153 EVDPLVYNMTTFEPGEISFNGIGGLTEQIRELREVIELPLKNPELFTRVGIKPPKGVLLY 212
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+A+AVA GA F I+ K GES +R+ F A ++ P IIF+D
Sbjct: 213 GPPGTGKTLLAKAVAATIGANFIFSPASAIVDKYIGESARLIREMFAYAKEHEPCIIFMD 272
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 273 EVDAIGGRR 281
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 55/111 (49%), Positives = 77/111 (69%)
Query: 85 YDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANET 144
Y DIGG KQ+ ++ E V LP+ H F++IG+KPP+G+L+YGPPGTGKTL+ARA A +T
Sbjct: 167 YSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQT 226
Query: 145 GAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+ + + GP+++ G+ +R AF A + P+IIFIDELDAI KR
Sbjct: 227 NSTYLKLAGPQLVQMFIGDGAKLVRDAFALAKEKGPTIIFIDELDAIGTKR 277
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 58/125 (46%), Positives = 82/125 (65%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E Y DIGG KQ+ ++ E + LP+ H F+ +G++PP+G+L+YGPPG
Sbjct: 118 VKAMEVDERPTEQ-YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 176
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKTL+ARA A +T A F + GP+++ G+ +R AF A + +PSIIFIDELDA
Sbjct: 177 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA 236
Query: 191 IAPKR 195
I KR
Sbjct: 237 IGTKR 241
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 58/125 (46%), Positives = 82/125 (65%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E Y DIGG KQ+ ++ E + LP+ H F+ +G++PP+G+L+YGPPG
Sbjct: 122 VKAMEVDERPTEQ-YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 180
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKTL+ARA A +T A F + GP+++ G+ +R AF A + +PSIIFIDELDA
Sbjct: 181 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA 240
Query: 191 IAPKR 195
I KR
Sbjct: 241 IGTKR 245
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 58/125 (46%), Positives = 82/125 (65%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E Y DIGG KQ+ ++ E + LP+ H F+ +G++PP+G+L+YGPPG
Sbjct: 172 VKAMEVDERPTEQ-YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 230
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKTL+ARA A +T A F + GP+++ G+ +R AF A + +PSIIFIDELDA
Sbjct: 231 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA 290
Query: 191 IAPKR 195
I KR
Sbjct: 291 IGTKR 295
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 58/125 (46%), Positives = 82/125 (65%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E Y DIGG KQ+ ++ E + LP+ H F+ +G++PP+G+L+YGPPG
Sbjct: 130 VKAMEVDERPTEQ-YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 188
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKTL+ARA A +T A F + GP+++ G+ +R AF A + +PSIIFIDELDA
Sbjct: 189 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA 248
Query: 191 IAPKR 195
I KR
Sbjct: 249 IGTKR 253
>UNIPROTKB|E9PMD8 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR003959
Pfam:PF00004 GO:GO:0005524 GO:GO:0001824 EMBL:AC090559
HGNC:HGNC:9549 ChiTaRS:PSMC3 IPI:IPI00978171 SMR:E9PMD8
Ensembl:ENST00000530651 Ensembl:ENST00000530887 Uniprot:E9PMD8
Length = 260
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 58/125 (46%), Positives = 82/125 (65%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E Y DIGG KQ+ ++ E + LP+ H F+ +G++PP+G+L+YGPPG
Sbjct: 137 VKAMEVDERPTEQ-YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 195
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKTL+ARA A +T A F + GP+++ G+ +R AF A + +PSIIFIDELDA
Sbjct: 196 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA 255
Query: 191 IAPKR 195
I KR
Sbjct: 256 IGTKR 260
>UNIPROTKB|E9PN50 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC090559
HGNC:HGNC:9549 ChiTaRS:PSMC3 IPI:IPI00979951
ProteinModelPortal:E9PN50 SMR:E9PN50 Ensembl:ENST00000531051
ArrayExpress:E9PN50 Bgee:E9PN50 Uniprot:E9PN50
Length = 239
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 58/125 (46%), Positives = 82/125 (65%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E Y DIGG KQ+ ++ E + LP+ H F+ +G++PP+G+L+YGPPG
Sbjct: 116 VKAMEVDERPTEQ-YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 174
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKTL+ARA A +T A F + GP+++ G+ +R AF A + +PSIIFIDELDA
Sbjct: 175 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA 234
Query: 191 IAPKR 195
I KR
Sbjct: 235 IGTKR 239
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 58/125 (46%), Positives = 82/125 (65%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E Y DIGG KQ+ ++ E + LP+ H F+ +G++PP+G+L+YGPPG
Sbjct: 172 VKAMEVDERPTEQ-YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 230
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKTL+ARA A +T A F + GP+++ G+ +R AF A + +PSIIFIDELDA
Sbjct: 231 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA 290
Query: 191 IAPKR 195
I KR
Sbjct: 291 IGTKR 295
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 58/125 (46%), Positives = 82/125 (65%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E Y DIGG KQ+ ++ E + LP+ H F+ +G++PP+G+L+YGPPG
Sbjct: 137 VKAMEVDERPTEQ-YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 195
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKTL+ARA A +T A F + GP+++ G+ +R AF A + +PSIIFIDELDA
Sbjct: 196 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFSLAKEKAPSIIFIDELDA 255
Query: 191 IAPKR 195
I KR
Sbjct: 256 IGNKR 260
>UNIPROTKB|O42587 [details] [associations]
symbol:psmc3-a "26S protease regulatory subunit 6A-A"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 CTD:4913 TIGRFAMs:TIGR01242 EMBL:Y10461
RefSeq:NP_001080249.1 UniGene:Xl.12803 ProteinModelPortal:O42587
PRIDE:O42587 GeneID:379941 KEGG:xla:379941 Xenbase:XB-GENE-962533
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 Uniprot:O42587
Length = 405
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 58/125 (46%), Positives = 82/125 (65%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E Y DIGG KQ+ ++ E + LP+ H F+ +G++PP+G+L+YGPPG
Sbjct: 156 VKAMEVDERPTEQ-YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 214
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKTL+ARA A +T A F + GP+++ G+ +R AF A + +PSIIFIDELDA
Sbjct: 215 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA 274
Query: 191 IAPKR 195
I KR
Sbjct: 275 IGTKR 279
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 58/125 (46%), Positives = 82/125 (65%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E Y DIGG KQ+ ++ E + LP+ H F+ +G++PP+G+L+YGPPG
Sbjct: 172 VKAMEVDERPTEQ-YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 230
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKTL+ARA A +T A F + GP+++ G+ +R AF A + +PSIIFIDELDA
Sbjct: 231 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA 290
Query: 191 IAPKR 195
I KR
Sbjct: 291 IGTKR 295
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 57/129 (44%), Positives = 82/129 (63%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E + Y +GG Q+ +++E +ELPL +P LF +G+KPP+G+LLY
Sbjct: 120 EVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 179
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A ++ P IIF+D
Sbjct: 180 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMD 239
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 240 EIDAIGGRR 248
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 57/129 (44%), Positives = 82/129 (63%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E + Y +GG Q+ +++E +ELPL +P LF +G+KPP+G+LLY
Sbjct: 120 EVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 179
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A ++ P IIF+D
Sbjct: 180 GPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFMD 239
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 240 EIDAIGGRR 248
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 58/125 (46%), Positives = 82/125 (65%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E Y DIGGC KQ+ ++ E V LP+ H F +G+ PP+G+L+YGPPG
Sbjct: 163 VKAMEVDERPTEQ-YSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPG 221
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKT++ARAVA +T + F + GP+++ G+ +R AF A + +P+IIFIDELDA
Sbjct: 222 TGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 281
Query: 191 IAPKR 195
I KR
Sbjct: 282 IGTKR 286
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 58/125 (46%), Positives = 82/125 (65%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E Y DIGGC KQ+ ++ E V LP+ H F +G+ PP+G+L+YGPPG
Sbjct: 163 VKAMEVDERPTEQ-YSDIGGCDKQIQELIEAVVLPMTHKDRFVNLGIHPPKGVLMYGPPG 221
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKT++ARAVA +T + F + GP+++ G+ +R AF A + +P+IIFIDELDA
Sbjct: 222 TGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 281
Query: 191 IAPKR 195
I KR
Sbjct: 282 IGTKR 286
>ZFIN|ZDB-GENE-030131-666 [details] [associations]
symbol:psmc3 "proteasome (prosome, macropain) 26S
subunit, ATPase, 3" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-666 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 EMBL:BX957297 IPI:IPI00817732 PRIDE:F1QJQ2
Ensembl:ENSDART00000133705 ArrayExpress:F1QJQ2 Bgee:F1QJQ2
Uniprot:F1QJQ2
Length = 427
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 58/125 (46%), Positives = 82/125 (65%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E Y DIGG KQ+ ++ E + LP+ H F+ +G++PP+G+L+YGPPG
Sbjct: 160 VKAMEVDERPTEQ-YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 218
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKTL+ARA A +T A F + GP+++ G+ +R AF A + +PSIIFIDELDA
Sbjct: 219 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA 278
Query: 191 IAPKR 195
I KR
Sbjct: 279 IGTKR 283
>POMBASE|SPAC17A5.01 [details] [associations]
symbol:pex6 "peroxin-6 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC17A5.01 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GO:GO:0005777 GenomeReviews:CU329670_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464 KO:K13339 PIR:T37816
RefSeq:NP_593468.1 ProteinModelPortal:O13764
EnsemblFungi:SPAC17A5.01.1 GeneID:2542437 KEGG:spo:SPAC17A5.01
OrthoDB:EOG48PQTF NextBio:20803494 Uniprot:O13764
Length = 948
Score = 310 (114.2 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 59/113 (52%), Positives = 80/113 (70%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V +DDIGG + +++ ++LPL+ P LF G+KP G+LLYGPPGTGKTL+A+AVA
Sbjct: 652 VNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPRSGVLLYGPPGTGKTLLAKAVAT 710
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E F I GPE+++ GESE+N+R FE+A +SP +IF DELD+IAP R
Sbjct: 711 ELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHR 763
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 299 (110.3 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 58/125 (46%), Positives = 82/125 (65%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E Y DIGG KQ+ ++ E + LP+ H F+ +G++PP+G+L+YGPPG
Sbjct: 175 VKAMEVDERPTEQ-YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 233
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKTL+ARA A +T A F + GP+++ G+ +R AF A + +PSIIFIDELDA
Sbjct: 234 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA 293
Query: 191 IAPKR 195
I KR
Sbjct: 294 IGTKR 298
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 299 (110.3 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 58/125 (46%), Positives = 82/125 (65%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E Y DIGG KQ+ ++ E + LP+ H F+ +G++PP+G+L+YGPPG
Sbjct: 175 VKAMEVDERPTEQ-YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 233
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKTL+ARA A +T A F + GP+++ G+ +R AF A + +PSIIFIDELDA
Sbjct: 234 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA 293
Query: 191 IAPKR 195
I KR
Sbjct: 294 IGTKR 298
>ASPGD|ASPL0000044770 [details] [associations]
symbol:AN10191 species:162425 "Emericella nidulans"
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 GO:GO:0005524
EMBL:BN001307 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
EnsemblFungi:CADANIAT00008053 OMA:QPIMDQI Uniprot:C8VM55
Length = 1631
Score = 303 (111.7 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 58/118 (49%), Positives = 80/118 (67%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V +D++GG + + Q+KEMV LPL +P +F+ + PPRG+L +GPPGTGKTL+ARA+AN
Sbjct: 566 VNFDNVGGLQGHIDQLKEMVSLPLLYPEIFQRFHIVPPRGVLFHGPPGTGKTLLARALAN 625
Query: 143 ETGA-----FFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+ F++ G + +SK GE+E LR FEEA K PSIIF DE+D +AP R
Sbjct: 626 SVSSEGRKVTFYMRKGADALSKWVGEAERQLRLLFEEARKTQPSIIFFDEIDGLAPVR 683
Score = 40 (19.1 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 59 AADTVIHCEG-DPIKREEEEEASNAV 83
A + ++ EG D I+ EEEE+ + V
Sbjct: 98 ATNRPVYNEGSDSIEDEEEEDEEDVV 123
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 299 (110.3 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 58/125 (46%), Positives = 82/125 (65%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E Y DIGG KQ+ ++ E + LP+ H F+ +G++PP+G+L+YGPPG
Sbjct: 179 VKAMEVDERPTEQ-YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 237
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKTL+ARA A +T A F + GP+++ G+ +R AF A + +PSIIFIDELDA
Sbjct: 238 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA 297
Query: 191 IAPKR 195
I KR
Sbjct: 298 IGTKR 302
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 59/129 (45%), Positives = 81/129 (62%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E V Y +GG Q+ +++E +ELPL +P LF +G+KPP+G+LLY
Sbjct: 121 EVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLY 180
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARA+A+ A F I I+ K GES +R+ F A + P IIF+D
Sbjct: 181 GPPGTGKTLLARAIASNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMD 240
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 241 EIDAIGGRR 249
>SGD|S000003502 [details] [associations]
symbol:YTA7 "Protein that localizes to chromatin and
regulates histone expression" species:4932 "Saccharomyces
cerevisiae" [GO:0042393 "histone binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0031936 "negative regulation of chromatin silencing"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IMP;IDA]
[GO:0042406 "extrinsic to endoplasmic reticulum membrane"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00382 SGD:S000003502
GO:GO:0005524 GO:GO:0005634 EMBL:BK006941 GO:GO:0045944
GO:GO:0003682 GO:GO:0000122 GO:GO:0031936 eggNOG:COG0464
GO:GO:0017111 GO:GO:0042393 GO:GO:0042406 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 EMBL:Y07893 EMBL:X81072
GeneTree:ENSGT00550000074694 EMBL:Z73055 PIR:S64603
RefSeq:NP_011786.1 ProteinModelPortal:P40340 SMR:P40340
DIP:DIP-6557N IntAct:P40340 MINT:MINT-629064 STRING:P40340
PaxDb:P40340 EnsemblFungi:YGR270W GeneID:853186 KEGG:sce:YGR270W
CYGD:YGR270w HOGENOM:HOG000157282 OMA:YPELYQN OrthoDB:EOG473T0K
NextBio:973329 Genevestigator:P40340 GermOnline:YGR270W
Uniprot:P40340
Length = 1379
Score = 311 (114.5 bits), Expect = 2.3e-26, P = 2.3e-26
Identities = 62/118 (52%), Positives = 81/118 (68%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 141
V +DDIGG + Q+KEMV LPL +P L++ + PPRG+L +GPPGTGKTL+ARA+A
Sbjct: 410 VNFDDIGGLDNYIDQLKEMVALPLLYPELYQNFNITPPRGVLFHGPPGTGKTLMARALAA 469
Query: 142 ----NETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+E FF+ G +I+SK GE+E LR FEEA K+ PSIIF DE+D +AP R
Sbjct: 470 SCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAKKHQPSIIFFDEIDGLAPVR 527
>ASPGD|ASPL0000034636 [details] [associations]
symbol:AN2917 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0045899 "positive regulation of RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001306
EMBL:AACD01000051 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03061 OMA:DIRWELI
OrthoDB:EOG4B01XN RefSeq:XP_660521.1 ProteinModelPortal:Q5B963
STRING:Q5B963 EnsemblFungi:CADANIAT00010170 GeneID:2874156
KEGG:ani:AN2917.2 Uniprot:Q5B963
Length = 443
Score = 297 (109.6 bits), Expect = 3.0e-26, P = 3.0e-26
Identities = 56/113 (49%), Positives = 75/113 (66%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V Y D+GGC++Q+ +++E+VE+PL P F +G+ PP+G LLYGPPGTGKTL ARAVAN
Sbjct: 182 VTYGDVGGCKEQIEKLREVVEMPLLSPERFVNLGIDPPKGALLYGPPGTGKTLCARAVAN 241
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
T A F + G E++ K GE +R+ FE A IIF DE+DA+ R
Sbjct: 242 RTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEIDAVGGAR 294
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 59/129 (45%), Positives = 83/129 (64%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DPI E+ +V Y +IGG Q+ +++E+VELPL P LF +G+K P+G+LLY
Sbjct: 118 EVDPIIFNMTAESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLY 177
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARA+A+ A F + I+ K GES +R+ F A + P +IF+D
Sbjct: 178 GPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMD 237
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 238 EIDAIGGRR 246
>UNIPROTKB|H0YJC0 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0017111
EMBL:AL133453 HGNC:HGNC:9553 Ensembl:ENST00000556813 Uniprot:H0YJC0
Length = 262
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 57/125 (45%), Positives = 81/125 (64%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E V Y +IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 114 EVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLY 173
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARAVA++ F + I+ K GES +R+ F A + P IIF+D
Sbjct: 174 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMD 233
Query: 187 ELDAI 191
E+DAI
Sbjct: 234 EIDAI 238
>UNIPROTKB|J3KRP2 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0017025 "TBP-class protein binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031595 "nuclear proteasome complex"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005524 EMBL:AC015651 ChiTaRS:PSMC5 HGNC:HGNC:9552
Ensembl:ENST00000584320 Uniprot:J3KRP2
Length = 241
Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
Identities = 69/166 (41%), Positives = 100/166 (60%)
Query: 28 VHKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAA--DT-VIHC----EGDPIKREEEEEAS 80
VH + F+V V+ I D P C VA D+ +H + DP+ E
Sbjct: 81 VHPEGKFVVD-----VDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKV 135
Query: 81 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAV 140
Y+ IGG KQ+ +IKE++ELP++HP LF+A+G+ P+G+LLYGPPGTGKTL+ARAV
Sbjct: 136 PDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAV 195
Query: 141 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
A+ T F ++G E++ K GE +R+ F A +++PSIIF+D
Sbjct: 196 AHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMD 241
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 302 (111.4 bits), Expect = 3.9e-26, P = 3.9e-26
Identities = 60/121 (49%), Positives = 85/121 (70%)
Query: 76 EEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTL 135
E + SN V ++D+GG L ++ +M+ + +RHP ++ +GV PPRG+LL+GPPG GKTL
Sbjct: 150 EFQISN-VKFEDVGGNDMTLKEVCKML-IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTL 207
Query: 136 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+A A+A E + PEI+S ++GESE LR+ FE+A N+P IIFIDE+DAI PKR
Sbjct: 208 LAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKR 267
Query: 196 E 196
E
Sbjct: 268 E 268
Score = 277 (102.6 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 58/142 (40%), Positives = 85/142 (59%)
Query: 56 CIVAADTVIHCEG-DP-IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 113
CI D ++ P KRE N V + DIG ++ + P+R+P FK
Sbjct: 444 CIELNDFIVALSSVQPSAKREGFVTVPN-VTWADIGALEDIREELTMAILAPVRNPDQFK 502
Query: 114 AIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFE 173
A+G+ P G+LL GPPG GKTL+A+AVANE+G F + GPE+++ GESE +R+ F+
Sbjct: 503 ALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 562
Query: 174 EADKNSPSIIFIDELDAIAPKR 195
A ++P +IF DE+DA+ P+R
Sbjct: 563 RAKNSAPCVIFFDEVDALCPRR 584
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
Identities = 57/129 (44%), Positives = 83/129 (64%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E V Y +IGG +Q+ +++E++ELPL +P +F +G+ PP+G LLY
Sbjct: 123 EVDPLVYNMTHEDPGNVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLY 182
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARA+A++ A F + I+ K GES +R+ F A + P IIF+D
Sbjct: 183 GPPGTGKTLLARAIASQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMD 242
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 243 EIDAIGGRR 251
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 294 (108.6 bits), Expect = 5.2e-26, P = 5.2e-26
Identities = 59/129 (45%), Positives = 81/129 (62%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E V Y IGG Q+ +++E++ELPL +P LF +G+ PP+G LLY
Sbjct: 122 EVDPLVYNMSHEDPGDVTYSAIGGLTDQIRELREVIELPLLNPELFLRVGITPPKGCLLY 181
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARAVA++ A F + I+ K GES +R+ F A + P IIF+D
Sbjct: 182 GPPGTGKTLLARAVASQLDANFLKVVSSAIVDKYIGESARLIREMFNYARDHQPCIIFMD 241
Query: 187 ELDAIAPKR 195
E+DAI +R
Sbjct: 242 EIDAIGGRR 250
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 294 (108.6 bits), Expect = 5.4e-26, P = 5.4e-26
Identities = 57/125 (45%), Positives = 81/125 (64%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E Y DIGG KQ+ ++ E + LP+ H F+ +G++PP+G+L+YGPPG
Sbjct: 167 VKAMEVDERPTEQ-YSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPG 225
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKTL+ARA A +T A F + GP+++ G+ +R AF A + +PSIIFIDELDA
Sbjct: 226 TGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPSIIFIDELDA 285
Query: 191 IAPKR 195
KR
Sbjct: 286 TGTKR 290
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 304 (112.1 bits), Expect = 6.0e-26, P = 6.0e-26
Identities = 59/124 (47%), Positives = 87/124 (70%)
Query: 73 REEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTG 132
R E + SN V ++D+GG L ++ +M+ + +RHP +++ +GV PPRG+LL+GPPG G
Sbjct: 252 RSTELQISN-VKFEDVGGNDATLKEVCKML-IHMRHPEVYQHLGVVPPRGVLLHGPPGCG 309
Query: 133 KTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
KTL+A A+A E + PEI+S ++GESE LR+ F++A N+P I+FIDE+DAI
Sbjct: 310 KTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAIT 369
Query: 193 PKRE 196
PKRE
Sbjct: 370 PKRE 373
Score = 271 (100.5 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 58/142 (40%), Positives = 85/142 (59%)
Query: 56 CIVAADTVIH-CEGDP-IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 113
CI D ++ E P KRE N V + DIG ++ + P+R+P F+
Sbjct: 549 CIELNDFIVALAEVQPSAKREGFVTVPN-VTWADIGALEDIRDELIMAILAPVRNPDQFR 607
Query: 114 AIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFE 173
+G+ P GILL GPPG GKTL+A+AVANE+G F + GPE+++ GESE +R+ F+
Sbjct: 608 TLGLGTPAGILLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 667
Query: 174 EADKNSPSIIFIDELDAIAPKR 195
A ++P +IF DE+DA+ P+R
Sbjct: 668 RAKNSAPCVIFFDEVDALCPRR 689
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 303 (111.7 bits), Expect = 6.6e-26, P = 6.6e-26
Identities = 60/132 (45%), Positives = 92/132 (69%)
Query: 68 GDPIKREEE---EEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGIL 124
G P K+ + E ++V ++D GG + L ++ +++ + +RHP +++ +GV PPRG L
Sbjct: 206 GVPAKKSKVKGFELQFSSVKFEDFGGSDETLEEVCKLL-IHMRHPEVYQRLGVVPPRGFL 264
Query: 125 LYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIF 184
L+GPPG GKTL+A+AVA ET I+ PE++S ++GESE LR+ FE+A ++P I+F
Sbjct: 265 LHGPPGCGKTLLAQAVAGETALPLLKISAPELVSGVSGESEQKLRELFEQAISSAPCILF 324
Query: 185 IDELDAIAPKRE 196
IDE+DAI PKRE
Sbjct: 325 IDEIDAITPKRE 336
Score = 264 (98.0 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 51/148 (34%), Positives = 88/148 (59%)
Query: 53 APYCIVAAD---TVIHCEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHP 109
A C++ +D +++ + P + E V + D+G + ++ + P+++P
Sbjct: 486 AALCVLMSDFSSSLVRVQ--PSAKREGFATVPDVTWADVGALQDVREELHMAIMAPIQNP 543
Query: 110 SLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLR 169
FKA+G+ P G+LL GPPG GKTL+A+AVAN +G F + GPE+++ GESE +R
Sbjct: 544 EQFKALGLSAPAGLLLAGPPGCGKTLLAKAVANASGLNFISVKGPELLNMYVGESERAVR 603
Query: 170 KAFEEADKNSPSIIFIDELDAIAPKREK 197
+ F+ ++P +IF DE+DA+ P+R +
Sbjct: 604 QVFQRGRNSAPCVIFFDEIDALCPRRSE 631
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 303 (111.7 bits), Expect = 7.2e-26, P = 7.2e-26
Identities = 57/125 (45%), Positives = 83/125 (66%)
Query: 72 KREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGT 131
KR+ + N + +GG Q+ E++ LP+ HP ++ + GV+PPRG+LLYGPPG
Sbjct: 180 KRKIDYSTPN-IDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGC 238
Query: 132 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAI 191
GKT IA A+A E F I+ P ++S ++GESE LR+ FEEA + +P +IF+DE+DAI
Sbjct: 239 GKTTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAI 298
Query: 192 APKRE 196
PKR+
Sbjct: 299 TPKRD 303
Score = 274 (101.5 bits), Expect = 9.3e-23, P = 9.3e-23
Identities = 56/145 (38%), Positives = 85/145 (58%)
Query: 53 APYCIVAADTVIHCEG-DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSL 111
AP I D V P + E V + ++G K ++ + P++ P L
Sbjct: 488 APLAITYQDFVNALPSVQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPEL 547
Query: 112 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA 171
+ +G+ P G+L++GPPG GKTL+A+AVANE+ A F I GPE+++K GESE +R+
Sbjct: 548 YLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQV 607
Query: 172 FEEADKNSPSIIFIDELDAIAPKRE 196
F+ A ++P IIF DELDA+ P+R+
Sbjct: 608 FQRARASTPCIIFFDELDALVPRRD 632
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 303 (111.7 bits), Expect = 7.2e-26, P = 7.2e-26
Identities = 57/125 (45%), Positives = 83/125 (66%)
Query: 72 KREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGT 131
KR+ + N + +GG Q+ E++ LP+ HP ++ + GV+PPRG+LLYGPPG
Sbjct: 180 KRKIDYSTPN-IDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGC 238
Query: 132 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAI 191
GKT IA A+A E F I+ P ++S ++GESE LR+ FEEA + +P +IF+DE+DAI
Sbjct: 239 GKTTIANALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAI 298
Query: 192 APKRE 196
PKR+
Sbjct: 299 TPKRD 303
Score = 274 (101.5 bits), Expect = 9.3e-23, P = 9.3e-23
Identities = 56/145 (38%), Positives = 85/145 (58%)
Query: 53 APYCIVAADTVIHCEG-DPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSL 111
AP I D V P + E V + ++G K ++ + P++ P L
Sbjct: 488 APLAITYQDFVNALPSVQPSAKREGFATIPDVTWQNVGALFKIRMELHMCIVQPIKKPEL 547
Query: 112 FKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKA 171
+ +G+ P G+L++GPPG GKTL+A+AVANE+ A F I GPE+++K GESE +R+
Sbjct: 548 YLKVGIAAPAGVLMWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESEKAVRQV 607
Query: 172 FEEADKNSPSIIFIDELDAIAPKRE 196
F+ A ++P IIF DELDA+ P+R+
Sbjct: 608 FQRARASTPCIIFFDELDALVPRRD 632
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 302 (111.4 bits), Expect = 7.2e-26, P = 7.2e-26
Identities = 60/121 (49%), Positives = 85/121 (70%)
Query: 76 EEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTL 135
E + SN V ++D+GG L ++ +M+ + +RHP ++ +GV PPRG+LL+GPPG GKTL
Sbjct: 139 EFQISN-VKFEDVGGNDMTLKEVCKML-IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTL 196
Query: 136 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+A A+A E + PEI+S ++GESE LR+ FE+A N+P IIFIDE+DAI PKR
Sbjct: 197 LAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKR 256
Query: 196 E 196
E
Sbjct: 257 E 257
Score = 277 (102.6 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 58/142 (40%), Positives = 85/142 (59%)
Query: 56 CIVAADTVIHCEG-DP-IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 113
CI D ++ P KRE N V + DIG ++ + P+R+P FK
Sbjct: 433 CIELNDFIVALSSVQPSAKREGFVTVPN-VTWADIGALEDIREELTMAILAPVRNPDQFK 491
Query: 114 AIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFE 173
A+G+ P G+LL GPPG GKTL+A+AVANE+G F + GPE+++ GESE +R+ F+
Sbjct: 492 ALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 551
Query: 174 EADKNSPSIIFIDELDAIAPKR 195
A ++P +IF DE+DA+ P+R
Sbjct: 552 RAKNSAPCVIFFDEVDALCPRR 573
>TAIR|locus:2084163 [details] [associations]
symbol:CDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0030422 "production of siRNA involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC009325 GO:GO:0009524
EMBL:AY136443 EMBL:BT002135 IPI:IPI00547846 RefSeq:NP_186810.2
UniGene:At.27731 UniGene:At.63552 ProteinModelPortal:Q9SS94
SMR:Q9SS94 IntAct:Q9SS94 PaxDb:Q9SS94 PRIDE:Q9SS94
EnsemblPlants:AT3G01610.1 GeneID:821105 KEGG:ath:AT3G01610
GeneFarm:1903 TAIR:At3g01610 InParanoid:Q9SS94 KO:K14571
OMA:REGFTTI PhylomeDB:Q9SS94 ProtClustDB:CLSN2720022
Genevestigator:Q9SS94 GermOnline:AT3G01610 Uniprot:Q9SS94
Length = 820
Score = 302 (111.4 bits), Expect = 9.0e-26, P = 9.0e-26
Identities = 58/121 (47%), Positives = 82/121 (67%)
Query: 76 EEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTL 135
E E + + D GG +K L +++ V P+ +P FK IGVKPP GIL +GPPG GKT
Sbjct: 223 EVEGTKGPTFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKTK 282
Query: 136 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+A A+ANE G F+ I+ E++S ++G SE N+R+ F +A + +PSI+FIDE+DAI KR
Sbjct: 283 LANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKR 342
Query: 196 E 196
E
Sbjct: 343 E 343
Score = 266 (98.7 bits), Expect = 6.6e-22, P = 6.6e-22
Identities = 53/115 (46%), Positives = 70/115 (60%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V +DD+GG Q + P++ P ++KA GV G LLYGPPG GKTLIA+A AN
Sbjct: 525 VKWDDVGGLDHLRLQFNRYIVRPIKKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAAN 584
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKREK 197
E GA F I G E+++K GESE +R F+ A +P +IF DE+DA+ R K
Sbjct: 585 EAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVIFFDEVDALTTSRGK 639
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 302 (111.4 bits), Expect = 9.8e-26, P = 9.8e-26
Identities = 60/121 (49%), Positives = 85/121 (70%)
Query: 76 EEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTL 135
E + SN V ++D+GG L ++ +M+ + +RHP ++ +GV PPRG+LL+GPPG GKTL
Sbjct: 256 EFQISN-VKFEDVGGNDMTLKEVCKML-IHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTL 313
Query: 136 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+A A+A E + PEI+S ++GESE LR+ FE+A N+P IIFIDE+DAI PKR
Sbjct: 314 LAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKR 373
Query: 196 E 196
E
Sbjct: 374 E 374
Score = 277 (102.6 bits), Expect = 4.7e-23, P = 4.7e-23
Identities = 58/142 (40%), Positives = 85/142 (59%)
Query: 56 CIVAADTVIHCEG-DP-IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 113
CI D ++ P KRE N V + DIG ++ + P+R+P FK
Sbjct: 550 CIELNDFIVALSSVQPSAKREGFVTVPN-VTWADIGALEDIREELTMAILAPVRNPDQFK 608
Query: 114 AIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFE 173
A+G+ P G+LL GPPG GKTL+A+AVANE+G F + GPE+++ GESE +R+ F+
Sbjct: 609 ALGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 668
Query: 174 EADKNSPSIIFIDELDAIAPKR 195
A ++P +IF DE+DA+ P+R
Sbjct: 669 RAKNSAPCVIFFDEVDALCPRR 690
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 293 (108.2 bits), Expect = 1.1e-25, P = 1.1e-25
Identities = 58/125 (46%), Positives = 81/125 (64%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E Y DIGG KQ+ ++ E V LP++ FK +G+KPP+G L+YGPPG
Sbjct: 186 VKAMEVDEKPTE-DYSDIGGLDKQIEELIEAVVLPMKQADKFKNLGIKPPKGALMYGPPG 244
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKTL+ARA A ++GA F + P+++ G+ +R AF A + +P+IIFIDELDA
Sbjct: 245 TGKTLLARACAAQSGATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKAPTIIFIDELDA 304
Query: 191 IAPKR 195
I KR
Sbjct: 305 IGTKR 309
>FB|FBgn0028684 [details] [associations]
symbol:Rpt5 "Regulatory particle triple-A ATPase 5"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0009987 "cellular process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 HSSP:Q01853 TIGRFAMs:TIGR01242 GO:GO:0008540
ChiTaRS:PSMC3 FlyBase:FBgn0028684 EMBL:AF134402
ProteinModelPortal:Q9XZC3 STRING:Q9XZC3 PRIDE:Q9XZC3
InParanoid:Q9XZC3 ArrayExpress:Q9XZC3 Bgee:Q9XZC3 Uniprot:Q9XZC3
Length = 431
Score = 290 (107.1 bits), Expect = 1.5e-25, P = 1.5e-25
Identities = 57/125 (45%), Positives = 81/125 (64%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E + DIGG KQ+ ++ E V LP+ H FK +G+ PP+G++LYGPPG
Sbjct: 165 VKAMEVDERPTEQ-FSDIGGLDKQIQELIEAVVLPMTHKEKFKNLGIHPPKGVILYGPPG 223
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKTL+ARA A +T + F + GP+++ G+ +R AF A + +P+IIFIDELDA
Sbjct: 224 TGKTLLARACAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPAIIFIDELDA 283
Query: 191 IAPKR 195
I KR
Sbjct: 284 IGTKR 288
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 299 (110.3 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 57/125 (45%), Positives = 86/125 (68%)
Query: 72 KREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGT 131
K + E ++V ++D+GG L ++ +M+ + +RHP +++ +GV PPRG+LL+GPPG
Sbjct: 250 KAKSTELQISSVKFEDVGGNDATLKEVCKML-IHMRHPEVYQHLGVVPPRGVLLHGPPGC 308
Query: 132 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAI 191
GKTL+A A+A E + PEI+S ++GESE LR F++A N+P I+FIDE+DAI
Sbjct: 309 GKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAI 368
Query: 192 APKRE 196
PKRE
Sbjct: 369 TPKRE 373
Score = 273 (101.2 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 56/142 (39%), Positives = 86/142 (60%)
Query: 56 CIVAADTVIHC-EGDP-IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 113
C+ D ++ E P KRE N V + D+G ++ + P+R+P F+
Sbjct: 549 CLELNDFIVALSEVQPSAKREGFVTVPN-VTWADVGALEDIREELTMAILAPVRNPEQFR 607
Query: 114 AIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFE 173
A+G+ P G+LL GPPG GKTL+A+AVANE+G F + GPE+++ GESE +R+ F+
Sbjct: 608 ALGLVAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 667
Query: 174 EADKNSPSIIFIDELDAIAPKR 195
A ++P +IF DE+DA+ P+R
Sbjct: 668 RAKNSAPCVIFFDEVDALCPRR 689
>ASPGD|ASPL0000062283 [details] [associations]
symbol:AN1366 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
Length = 729
Score = 296 (109.3 bits), Expect = 3.1e-25, P = 3.1e-25
Identities = 63/135 (46%), Positives = 86/135 (63%)
Query: 67 EGDPIKREEEEEASNA-----VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPR 121
E KR + E A + V D+GG + Q+ ++V LP+ P ++ A V+PPR
Sbjct: 141 ESHSSKRRKAENAVDRSPPTHVSLADLGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPR 200
Query: 122 GILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPS 181
G+LL+GPPG GKT+IA A A E G F I+ P I+S ++GESE LR+ FEEA + +P
Sbjct: 201 GVLLHGPPGCGKTMIANAFAAELGVPFISISAPSIVSGMSGESEKALREHFEEAKRLAPC 260
Query: 182 IIFIDELDAIAPKRE 196
+IFIDE+DAI PKRE
Sbjct: 261 LIFIDEIDAITPKRE 275
Score = 276 (102.2 bits), Expect = 4.4e-23, P = 4.4e-23
Identities = 54/113 (47%), Positives = 79/113 (69%)
Query: 87 DIG---GCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANE 143
DIG G R +LA +V+ P++HP L+ ++G+ P G+LL+GPPG GKTL+A+AVANE
Sbjct: 470 DIGALSGIRDELATA--IVD-PIKHPELYASVGITAPTGVLLWGPPGCGKTLLAKAVANE 526
Query: 144 TGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKRE 196
+ A F + GPE+++K GESE +R+ F A + P +IF DELDA+ P+R+
Sbjct: 527 SRANFISVKGPELLNKYVGESERAVRQVFVRARSSIPCVIFFDELDALVPRRD 579
>UNIPROTKB|H7C475 [details] [associations]
symbol:ATAD2B "ATPase family AAA domain-containing protein
2B" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:AC009242 EMBL:AC066692 EMBL:AC079924 HGNC:HGNC:29230
ProteinModelPortal:H7C475 Ensembl:ENST00000366438 Uniprot:H7C475
Length = 155
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 58/119 (48%), Positives = 76/119 (63%)
Query: 82 AVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVA 141
+V +D IGG + +KEMV PL +P +F+ ++PPRG L YGPPGTGKTL+ARA+A
Sbjct: 18 SVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALA 77
Query: 142 NETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
NE FF+ G + +SK GESE LR F++A PSIIF DE+D +AP R
Sbjct: 78 NECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVR 136
>UNIPROTKB|D4A9R0 [details] [associations]
symbol:LOC500625 "Protein LOC500625" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00550000074694 IPI:IPI00471839
Ensembl:ENSRNOT00000052041 RGD:1566199 ArrayExpress:D4A9R0
Uniprot:D4A9R0
Length = 419
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 58/119 (48%), Positives = 76/119 (63%)
Query: 82 AVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVA 141
+V +D IGG + +KEMV PL +P +F+ ++PPRG L YGPPGTGKTL+ARA+A
Sbjct: 235 SVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALA 294
Query: 142 NETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
NE FF+ G + +SK GESE LR F++A PSIIF DE+D +AP R
Sbjct: 295 NECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVR 353
>ASPGD|ASPL0000034610 [details] [associations]
symbol:pexF species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0006625 "protein targeting to peroxisome" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0001302 "replicative cell
aging" evidence=IEA] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:BN001306 GO:GO:0017111
EnsemblFungi:CADANIAT00010163 OMA:CFSGDWV Uniprot:C8VJ57
Length = 1476
Score = 289 (106.8 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 54/113 (47%), Positives = 76/113 (67%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++D+GG + E ++LPL P LF A G+K GIL YGPPGTGKTL+A+A+A
Sbjct: 1022 VSWEDVGGLTNVKDALVETIQLPLERPELF-AKGMKKRSGILFYGPPGTGKTLLAKAIAT 1080
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E FF + GPE+++ GESE+N+R+ F+ A P ++F DELD++APKR
Sbjct: 1081 EFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKR 1133
Score = 40 (19.1 bits), Expect = 4.0e-25, Sum P(2) = 4.0e-25
Identities = 10/47 (21%), Positives = 24/47 (51%)
Query: 40 MRAVEFKIVDTDPAPYCIVAADTV-IHCEGDPIKREEEEEASNAVGY 85
+R +E +++D P P DT+ + E D ++ ++ ++ G+
Sbjct: 144 LRLIEIRVMDVVPLPL-----DTIYVTVERDLLRNHDDVQSRFGGGF 185
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 296 (109.3 bits), Expect = 4.4e-25, P = 4.4e-25
Identities = 56/114 (49%), Positives = 78/114 (68%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
+ + ++GG L I+E +E P+ HP ++ +GV+PPRGILL+GP G GKTL+A+A+A
Sbjct: 213 INFSNLGGVESCLRDIREHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAG 272
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKRE 196
E F I+ EI S ++GESE+ +R F A +P IIFIDE+DAIAPKRE
Sbjct: 273 ELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKRE 326
Score = 285 (105.4 bits), Expect = 6.7e-24, P = 6.7e-24
Identities = 54/124 (43%), Positives = 80/124 (64%)
Query: 72 KREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGT 131
KRE N V +DD+G ++ + P+R+P +K +G+ P G+L+YGPPG
Sbjct: 553 KREGFATIPN-VTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDSPAGVLMYGPPGC 611
Query: 132 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAI 191
GKTL+A+A+A+E A F + GPE+++K GESE +R+ F+ A +SP +IF DE DA+
Sbjct: 612 GKTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQRAAASSPCVIFFDEFDAL 671
Query: 192 APKR 195
APKR
Sbjct: 672 APKR 675
>WB|WBGene00008682 [details] [associations]
symbol:lex-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0007126 "meiosis" evidence=IMP]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0009792 GO:GO:0008406 GO:GO:0006351
eggNOG:COG0464 GO:GO:0017111 GO:GO:0045132 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:Z68297
EMBL:Z68316 EMBL:DQ140399 PIR:T20739 RefSeq:NP_001122768.1
RefSeq:NP_001122769.1 RefSeq:NP_502289.2 UniGene:Cel.6917
ProteinModelPortal:P54816 SMR:P54816 STRING:P54816 PaxDb:P54816
EnsemblMetazoa:F11A10.1a.1 EnsemblMetazoa:F11A10.1a.2 GeneID:178146
KEGG:cel:CELE_F11A10.1 UCSC:F11A10.1a CTD:178146 WormBase:F11A10.1a
WormBase:F11A10.1b WormBase:F11A10.1c GeneTree:ENSGT00550000074694
HOGENOM:HOG000154515 InParanoid:P54816 OMA:QDETENG NextBio:899910
GO:GO:0031445 Uniprot:P54816
Length = 1291
Score = 288 (106.4 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 56/120 (46%), Positives = 80/120 (66%)
Query: 81 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAV 140
++VG+D +GG + +KE+V P+ +P +F+ + PP+G++ YGPPGTGKTL+ARA+
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 445
Query: 141 ANET--GA---FFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
ANE GA FF+ G + +SK GESE LR F++A PSIIF DE+D +AP R
Sbjct: 446 ANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVR 505
Score = 39 (18.8 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 67 EGDPIKREEEEEASNA 82
E DP EEE+++SNA
Sbjct: 240 EKDP--EEEEDDSSNA 253
>UNIPROTKB|P54816 [details] [associations]
symbol:lex-1 "Tat-binding homolog 7" species:6239
"Caenorhabditis elegans" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0031445 "regulation of heterochromatin assembly" evidence=IMP]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0009792 GO:GO:0008406 GO:GO:0006351
eggNOG:COG0464 GO:GO:0017111 GO:GO:0045132 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 EMBL:Z68297
EMBL:Z68316 EMBL:DQ140399 PIR:T20739 RefSeq:NP_001122768.1
RefSeq:NP_001122769.1 RefSeq:NP_502289.2 UniGene:Cel.6917
ProteinModelPortal:P54816 SMR:P54816 STRING:P54816 PaxDb:P54816
EnsemblMetazoa:F11A10.1a.1 EnsemblMetazoa:F11A10.1a.2 GeneID:178146
KEGG:cel:CELE_F11A10.1 UCSC:F11A10.1a CTD:178146 WormBase:F11A10.1a
WormBase:F11A10.1b WormBase:F11A10.1c GeneTree:ENSGT00550000074694
HOGENOM:HOG000154515 InParanoid:P54816 OMA:QDETENG NextBio:899910
GO:GO:0031445 Uniprot:P54816
Length = 1291
Score = 288 (106.4 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 56/120 (46%), Positives = 80/120 (66%)
Query: 81 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAV 140
++VG+D +GG + +KE+V P+ +P +F+ + PP+G++ YGPPGTGKTL+ARA+
Sbjct: 386 SSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGPPGTGKTLVARAL 445
Query: 141 ANET--GA---FFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
ANE GA FF+ G + +SK GESE LR F++A PSIIF DE+D +AP R
Sbjct: 446 ANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSIIFFDEIDGLAPVR 505
Score = 39 (18.8 bits), Expect = 4.4e-25, Sum P(2) = 4.4e-25
Identities = 9/16 (56%), Positives = 12/16 (75%)
Query: 67 EGDPIKREEEEEASNA 82
E DP EEE+++SNA
Sbjct: 240 EKDP--EEEEDDSSNA 253
>TAIR|locus:2198748 [details] [associations]
symbol:AT1G05910 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
EMBL:CP002684 GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 EMBL:AC009999
OMA:QDETENG EMBL:AY056785 EMBL:BT002728 IPI:IPI00523133
IPI:IPI00542285 PIR:B86194 RefSeq:NP_563753.1 UniGene:At.26297
ProteinModelPortal:F4IAE9 SMR:F4IAE9 PRIDE:F4IAE9
EnsemblPlants:AT1G05910.1 GeneID:837101 KEGG:ath:AT1G05910
GeneFarm:1906 TAIR:At1g05910 HOGENOM:HOG000030246 Uniprot:F4IAE9
Length = 1210
Score = 298 (110.0 bits), Expect = 4.7e-25, P = 4.7e-25
Identities = 58/118 (49%), Positives = 80/118 (67%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 141
+ +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 378 INFDDIGGLSEYINDLKEMVFFPLLYPEFFASYSITPPRGVLLCGPPGTGKTLIARALAC 437
Query: 142 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
++ G F++ G +++SK GE+E L+ FEEA +N PSIIF DE+D +AP R
Sbjct: 438 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 495
>ZFIN|ZDB-GENE-030131-5754 [details] [associations]
symbol:wu:fi16e04 "wu:fi16e04" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001487
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503 PROSITE:PS00674
PROSITE:PS50014 SMART:SM00297 SMART:SM00382
ZFIN:ZDB-GENE-030131-5754 GO:GO:0005524 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074694 EMBL:CABZ01038330
IPI:IPI00901018 Ensembl:ENSDART00000111963 Uniprot:E7EXJ5
Length = 1358
Score = 298 (110.0 bits), Expect = 5.6e-25, P = 5.6e-25
Identities = 60/123 (48%), Positives = 79/123 (64%)
Query: 78 EASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIA 137
+ V +D IGG K ++ +KEMV PL +P +F+ ++PPRG L YGPPGTGKTL+A
Sbjct: 382 QIDQTVRFDSIGGLGKHISALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVA 441
Query: 138 RAVANETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
RA+ANE FF+ G + +SK GESE LR F++A + PSIIF DE+D IA
Sbjct: 442 RALANECSQGERKVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGIA 501
Query: 193 PKR 195
P R
Sbjct: 502 PVR 504
>SGD|S000005273 [details] [associations]
symbol:PEX6 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=IEA;IMP;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IMP;IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0016562
"protein import into peroxisome matrix, receptor recycling"
evidence=IGI;IDA;IMP] [GO:0001302 "replicative cell aging"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005273 GO:GO:0005829 GO:GO:0005524 GO:GO:0005777
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0016887 GO:GO:0005778
GO:GO:0046982 eggNOG:COG0464 EMBL:Z46259 GO:GO:0016562 KO:K13339
GeneTree:ENSGT00550000074953 OrthoDB:EOG48PQTF EMBL:L20789
EMBL:Z71605 PIR:S43211 RefSeq:NP_014070.1 ProteinModelPortal:P33760
SMR:P33760 DIP:DIP-2621N IntAct:P33760 MINT:MINT-423224
STRING:P33760 PaxDb:P33760 PeptideAtlas:P33760 EnsemblFungi:YNL329C
GeneID:855387 KEGG:sce:YNL329C CYGD:YNL329c HOGENOM:HOG000248247
OMA:FTGADFY NextBio:979190 ArrayExpress:P33760
Genevestigator:P33760 GermOnline:YNL329C Uniprot:P33760
Length = 1030
Score = 296 (109.3 bits), Expect = 6.0e-25, P = 6.0e-25
Identities = 54/113 (47%), Positives = 80/113 (70%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V +DDIGG +I + +++PL+HP LF + G+K GIL YGPPGTGKTL+A+A+A
Sbjct: 729 VTWDDIGGIDFVKGEILDTIDMPLKHPELFTS-GMKKRSGILFYGPPGTGKTLMAKAIAT 787
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
FF + GPE+++ GESE+N+R+ F++A + P +IF DE+D++APKR
Sbjct: 788 NFSLNFFSVKGPELLNMYIGESEANVRRVFQKAREAKPCVIFFDEIDSVAPKR 840
>UNIPROTKB|F1NG80 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
Uniprot:F1NG80
Length = 748
Score = 293 (108.2 bits), Expect = 6.9e-25, P = 6.9e-25
Identities = 76/193 (39%), Positives = 103/193 (53%)
Query: 12 LFEVYLKPYFLEAYRPVHKDDLFIVRGGMRAVEFKIVD--TDPA----PYCIVAADTVIH 65
L VY+ P+++ P VR + VE VD T+ A P V VI
Sbjct: 131 LTNVYVSPHYVVTVGPN-------VRAPVLHVEILSVDPVTEEAGLITPQTSVTIKEVIT 183
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
E + E+ + A G DD+G +KEMV+LP R P FK +G+ P G+LL
Sbjct: 184 LERYRLLTEDTAKIPVA-GLDDVG------ESLKEMVDLPFRFPRTFKKLGLSVPNGVLL 236
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNS---PSI 182
GPPG GKTL+ +AVA E GA+ I+GP + GESE NLR FE+ + S P++
Sbjct: 237 VGPPGVGKTLLVKAVAREAGAYLLCISGPALYGSRPGESEENLRSVFEKGREMSCEGPTV 296
Query: 183 IFIDELDAIAPKR 195
+FIDE+DA+ PKR
Sbjct: 297 LFIDEIDALCPKR 309
Score = 229 (85.7 bits), Expect = 5.2e-18, P = 5.2e-18
Identities = 43/113 (38%), Positives = 68/113 (60%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
+ ++ IGG ++K+ VE P++ P F +G+ P+G+LLYGP G KT + +AVA
Sbjct: 460 ITWEQIGGLEDVKLKLKQSVEWPMKLPQAFARMGLARPKGVLLYGPSGCAKTTLVKAVAT 519
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
F ++G E+ S G+SE L + F +A N+P+IIF+DE+D+I R
Sbjct: 520 SCHCSFLSVSGAELFSPYVGDSEKILSQVFRQARANTPAIIFLDEIDSILGSR 572
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 289 (106.8 bits), Expect = 7.7e-25, P = 7.7e-25
Identities = 52/113 (46%), Positives = 79/113 (69%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +++E+V+ P+ HP F G+ P +G+L YGPPG GKTL+A+A+AN
Sbjct: 206 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 265
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E A F I GPE+++ GESE+N+R+ F++A + +P ++F DELD+IA R
Sbjct: 266 ECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 318
Score = 213 (80.0 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 42/46 (91%), Positives = 46/46 (100%)
Query: 152 NGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKREK 197
+GPEIMSKLAGESESNLRKAFEEA+KN+P+IIFIDELDAIAPKREK
Sbjct: 2 SGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 47
>DICTYBASE|DDB_G0281521 [details] [associations]
symbol:DDB_G0281521 "BRAT group protein"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 dictyBase:DDB_G0281521 GO:GO:0005524
EMBL:AAFI02000041 eggNOG:COG0464 GO:GO:0017111 Gene3D:1.20.920.10
SUPFAM:SSF47370 RefSeq:XP_640671.1 ProteinModelPortal:Q54TZ0
EnsemblProtists:DDB0220704 GeneID:8623056 KEGG:ddi:DDB_G0281521
InParanoid:Q54TZ0 OMA:FPEYYEL ProtClustDB:CLSZ2846786
Uniprot:Q54TZ0
Length = 1800
Score = 298 (110.0 bits), Expect = 8.2e-25, P = 8.2e-25
Identities = 59/129 (45%), Positives = 79/129 (61%)
Query: 72 KREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGT 131
K E N +G+ IGG K + +KEM+ LPL +P +F ++PP+G+L YGPPGT
Sbjct: 725 KDSEPLSIDNKIGFSSIGGLDKHIQLLKEMLMLPLLYPEVFNKFKIQPPKGVLFYGPPGT 784
Query: 132 GKTLIARAVANETGA-----FFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GKTL+ARA+ NE FF+ G + +SK GE+E LR FE+A PSIIF D
Sbjct: 785 GKTLLARALVNECNVGGQKVSFFMRKGADCLSKWVGEAERQLRLLFEQAKAMQPSIIFFD 844
Query: 187 ELDAIAPKR 195
E+D +AP R
Sbjct: 845 EIDGLAPVR 853
>UNIPROTKB|F1NUE7 [details] [associations]
symbol:F1NUE7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00550000074694 OMA:WNISAGQ
EMBL:AADN02018482 IPI:IPI00579829 Ensembl:ENSGALT00000026612
Uniprot:F1NUE7
Length = 487
Score = 287 (106.1 bits), Expect = 8.3e-25, P = 8.3e-25
Identities = 58/119 (48%), Positives = 76/119 (63%)
Query: 82 AVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVA 141
+V +D IGG + +KEMV PL +P +F+ ++PPRG L YGPPGTGKTL+ARA+A
Sbjct: 309 SVRFDSIGGLSHHILALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALA 368
Query: 142 NETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
NE FF+ G + +SK GESE LR F++A PSIIF DE+D +AP R
Sbjct: 369 NECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVR 427
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 293 (108.2 bits), Expect = 8.7e-25, P = 8.7e-25
Identities = 56/131 (42%), Positives = 84/131 (64%)
Query: 66 CEGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILL 125
C+ K +E+ N+ +GG +AQ+ E++ LP+ HP +F + GV+PPRG+LL
Sbjct: 186 CKVKRQKIKEDRSPPNS-SLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLL 244
Query: 126 YGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFI 185
+GPPG GKT IA A+A E F I+ P ++S ++GESE +R F+EA +P ++F
Sbjct: 245 HGPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFF 304
Query: 186 DELDAIAPKRE 196
DE+DAI PKR+
Sbjct: 305 DEIDAITPKRD 315
Score = 275 (101.9 bits), Expect = 7.4e-23, P = 7.4e-23
Identities = 48/114 (42%), Positives = 78/114 (68%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V + ++G ++ ++ + P++ P L++ +G+ P G+LL+GPPG GKTL+A+AVAN
Sbjct: 530 VTWANVGALQRVRLELNMAIVQPIKRPELYEKVGISAPGGVLLWGPPGCGKTLLAKAVAN 589
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKRE 196
E+ A F I GPE+++K GESE ++R+ F A + P +IF DELDA+ P+R+
Sbjct: 590 ESRANFISIKGPELLNKYVGESERSIRQVFTRARASVPCVIFFDELDALVPRRD 643
>UNIPROTKB|E1BC78 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:DAAA02038173 EMBL:DAAA02038174
IPI:IPI00923885 Ensembl:ENSBTAT00000061524 Uniprot:E1BC78
Length = 1372
Score = 296 (109.3 bits), Expect = 9.2e-25, P = 9.2e-25
Identities = 58/123 (47%), Positives = 80/123 (65%)
Query: 78 EASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIA 137
+ ++V +D +GG +A +KEMV PL +P +F+ ++PPRG L YGPPGTGKTL+A
Sbjct: 404 QLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVA 463
Query: 138 RAVANETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
RA+ANE FF+ G + +SK GESE LR F++A + PSIIF DE+D +A
Sbjct: 464 RALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLA 523
Query: 193 PKR 195
P R
Sbjct: 524 PVR 526
>UNIPROTKB|E2RRW1 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
CTD:29028 OMA:PSVYENG GeneTree:ENSGT00550000074694
EMBL:AAEX03008783 RefSeq:XP_850520.1 ProteinModelPortal:E2RRW1
Ensembl:ENSCAFT00000001534 GeneID:475090 KEGG:cfa:475090
Uniprot:E2RRW1
Length = 1373
Score = 296 (109.3 bits), Expect = 9.2e-25, P = 9.2e-25
Identities = 58/123 (47%), Positives = 80/123 (65%)
Query: 78 EASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIA 137
+ ++V +D +GG +A +KEMV PL +P +F+ ++PPRG L YGPPGTGKTL+A
Sbjct: 398 QLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVA 457
Query: 138 RAVANETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
RA+ANE FF+ G + +SK GESE LR F++A + PSIIF DE+D +A
Sbjct: 458 RALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLA 517
Query: 193 PKR 195
P R
Sbjct: 518 PVR 520
>UNIPROTKB|F1RR16 [details] [associations]
symbol:ATAD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 CTD:29028 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:CU582936 EMBL:CU469009
RefSeq:XP_001926065.4 UniGene:Ssc.23683 Ensembl:ENSSSCT00000006566
GeneID:100155780 KEGG:ssc:100155780 Uniprot:F1RR16
Length = 1388
Score = 296 (109.3 bits), Expect = 9.4e-25, P = 9.4e-25
Identities = 58/123 (47%), Positives = 80/123 (65%)
Query: 78 EASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIA 137
+ ++V +D +GG +A +KEMV PL +P +F+ ++PPRG L YGPPGTGKTL+A
Sbjct: 414 QLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVA 473
Query: 138 RAVANETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
RA+ANE FF+ G + +SK GESE LR F++A + PSIIF DE+D +A
Sbjct: 474 RALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLA 533
Query: 193 PKR 195
P R
Sbjct: 534 PVR 536
>UNIPROTKB|Q6PL18 [details] [associations]
symbol:ATAD2 "ATPase family AAA domain-containing protein
2" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006355 GO:GO:0006200 GO:GO:0006351
GO:GO:0016887 eggNOG:COG0464 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 EMBL:AY598335 EMBL:CR749832 EMBL:AL833653
EMBL:BC010686 EMBL:BC019909 EMBL:BC113656 EMBL:AK097133
EMBL:AF118088 IPI:IPI00170548 IPI:IPI00470801 RefSeq:NP_054828.2
UniGene:Hs.370834 PDB:3DAI PDBsum:3DAI ProteinModelPortal:Q6PL18
SMR:Q6PL18 DIP:DIP-46197N STRING:Q6PL18 PhosphoSite:Q6PL18
DMDM:74762365 PaxDb:Q6PL18 PRIDE:Q6PL18 DNASU:29028
Ensembl:ENST00000287394 GeneID:29028 KEGG:hsa:29028 UCSC:uc003yqh.4
CTD:29028 GeneCards:GC08M124401 H-InvDB:HIX0007764 HGNC:HGNC:30123
HPA:CAB056158 HPA:HPA019860 HPA:HPA029424 MIM:611941
neXtProt:NX_Q6PL18 PharmGKB:PA134895566 HOVERGEN:HBG080873
InParanoid:Q6PL18 OMA:PSVYENG OrthoDB:EOG441Q9S PhylomeDB:Q6PL18
ChiTaRS:ATAD2 EvolutionaryTrace:Q6PL18 GenomeRNAi:29028
NextBio:51959 ArrayExpress:Q6PL18 Bgee:Q6PL18 CleanEx:HS_ATAD2
Genevestigator:Q6PL18 GermOnline:ENSG00000156802 Uniprot:Q6PL18
Length = 1390
Score = 296 (109.3 bits), Expect = 9.4e-25, P = 9.4e-25
Identities = 58/123 (47%), Positives = 80/123 (65%)
Query: 78 EASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIA 137
+ ++V +D +GG +A +KEMV PL +P +F+ ++PPRG L YGPPGTGKTL+A
Sbjct: 418 QLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVA 477
Query: 138 RAVANETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
RA+ANE FF+ G + +SK GESE LR F++A + PSIIF DE+D +A
Sbjct: 478 RALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLA 537
Query: 193 PKR 195
P R
Sbjct: 538 PVR 540
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 285 (105.4 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 57/125 (45%), Positives = 78/125 (62%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E Y DIGG KQ+ +I E + P++ FK +G+K P+G L+YGPPG
Sbjct: 197 VKAMEVDEKPTEK-YTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGALMYGPPG 255
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKTL+ARA A ET A F + GP+++ G+ +R F A + +PSIIFIDELDA
Sbjct: 256 TGKTLLARACAAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIFIDELDA 315
Query: 191 IAPKR 195
+ KR
Sbjct: 316 VGTKR 320
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 283 (104.7 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 56/125 (44%), Positives = 80/125 (64%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E +E Y DIGG KQ+ ++ E + LP++ F+ +GVKPP+G L++GPPG
Sbjct: 171 VKAMEVDEKPTE-RYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGCLMFGPPG 229
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
TGKTL+ARA A ++ A F + P+++ G+ +R AF A + SP+IIFIDELDA
Sbjct: 230 TGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAIIFIDELDA 289
Query: 191 IAPKR 195
I KR
Sbjct: 290 IGTKR 294
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 293 (108.2 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 57/115 (49%), Positives = 76/115 (66%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++D+GG + Q+ E VE P +H FK IG +PP GIL++GPPG KTL+ARAVA+
Sbjct: 721 VNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTLMARAVAS 780
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKREK 197
E F + GPE+ SK GESE +R F +A N+PSIIF DE+D++A R K
Sbjct: 781 EAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIRGK 835
Score = 263 (97.6 bits), Expect = 2.0e-21, P = 2.0e-21
Identities = 52/123 (42%), Positives = 83/123 (67%)
Query: 77 EEASNAVGYD--DIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKT 134
+E N VG + +GG K+ A ++++++ SL ++G++P +G+L++GPPGTGKT
Sbjct: 375 DEGEN-VGCEISKLGGLSKEYAILRDIIDSSSIKNSL-SSLGLRPTKGVLIHGPPGTGKT 432
Query: 135 LIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPK 194
+AR A +G FF +NGPEI+S+ GESE L + F A +P+++FID+LDAIAP
Sbjct: 433 SLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPAVVFIDDLDAIAPA 492
Query: 195 REK 197
R++
Sbjct: 493 RKE 495
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 282 (104.3 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 62/150 (41%), Positives = 90/150 (60%)
Query: 47 IVDTDPAPYCIVAADTVIHCEGDP-IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELP 105
+V + Y I+ DT + E D +K E +E Y D+GG KQ+ ++ E + LP
Sbjct: 145 LVGVNKDSYLIL--DT-LPSEFDSRVKAMEVDEKPTET-YSDVGGLDKQIEELVEAIVLP 200
Query: 106 LRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESE 165
++ FK +G++ P+G L+YGPPGTGKTL+ARA A +T A F + P+++ GE
Sbjct: 201 MKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGA 260
Query: 166 SNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
+R AF A + +P+IIFIDELDAI KR
Sbjct: 261 KLVRDAFALAKEKAPTIIFIDELDAIGTKR 290
>UNIPROTKB|F1SCW5 [details] [associations]
symbol:F1SCW5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074694
EMBL:CU467526 EMBL:CU928810 Ensembl:ENSSSCT00000009401 OMA:WNISAGQ
Uniprot:F1SCW5
Length = 528
Score = 286 (105.7 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 58/119 (48%), Positives = 76/119 (63%)
Query: 82 AVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVA 141
+V +D IGG + +KEMV PL +P +F+ ++PPRG L YGPPGTGKTL+ARA+A
Sbjct: 401 SVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALA 460
Query: 142 NETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
NE FF+ G + +SK GESE LR F++A PSIIF DE+D +AP R
Sbjct: 461 NECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVR 519
>UNIPROTKB|H0YJS8 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:AL133453 HGNC:HGNC:9553 Ensembl:ENST00000555339 Uniprot:H0YJS8
Length = 195
Score = 280 (103.6 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 54/121 (44%), Positives = 77/121 (63%)
Query: 67 EGDPIKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLY 126
E DP+ E V Y +IGG +Q+ +++E++ELPL +P LF+ +G+ PP+G LLY
Sbjct: 75 EVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLY 134
Query: 127 GPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFID 186
GPPGTGKTL+ARAVA++ F + I+ K GES +R+ F A + P IIF+D
Sbjct: 135 GPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMD 194
Query: 187 E 187
E
Sbjct: 195 E 195
>MGI|MGI:1917722 [details] [associations]
symbol:Atad2 "ATPase family, AAA domain containing 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
MGI:MGI:1917722 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0006200 GO:GO:0006351 GO:GO:0016887 eggNOG:COG0464
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 CTD:29028
HOVERGEN:HBG080873 ChiTaRS:ATAD2 EMBL:AK029867 EMBL:AK134319
IPI:IPI00135252 IPI:IPI00228860 RefSeq:NP_081711.2
UniGene:Mm.221758 ProteinModelPortal:Q8CDM1 SMR:Q8CDM1
IntAct:Q8CDM1 STRING:Q8CDM1 PhosphoSite:Q8CDM1 PRIDE:Q8CDM1
GeneID:70472 KEGG:mmu:70472 UCSC:uc007vtf.1 UCSC:uc007vtg.1
HOGENOM:HOG000034119 InParanoid:Q3UYW6 NextBio:331701
CleanEx:MM_ATAD2 Genevestigator:Q8CDM1
GermOnline:ENSMUSG00000022360 Uniprot:Q8CDM1
Length = 1040
Score = 292 (107.8 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 57/123 (46%), Positives = 79/123 (64%)
Query: 78 EASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIA 137
+ +V +D +GG +A +KEMV PL +P +F+ ++PPRG L YGPPGTGKTL+A
Sbjct: 73 QLDTSVRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTLVA 132
Query: 138 RAVANETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
RA+ANE FF+ G + +SK GESE LR F++A + P+IIF DE+D +A
Sbjct: 133 RALANECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPAIIFFDEIDGLA 192
Query: 193 PKR 195
P R
Sbjct: 193 PVR 195
>UNIPROTKB|G4NBI6 [details] [associations]
symbol:MGG_00529 "Peroxisomal biogenesis factor 6"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CM001235 GO:GO:0017111 KO:K13339
RefSeq:XP_003718527.1 ProteinModelPortal:G4NBI6
EnsemblFungi:MGG_00529T0 GeneID:2674587 KEGG:mgr:MGG_00529
Uniprot:G4NBI6
Length = 1375
Score = 293 (108.2 bits), Expect = 1.9e-24, P = 1.9e-24
Identities = 55/114 (48%), Positives = 77/114 (67%)
Query: 82 AVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVA 141
+V +DD+GG + E ++LPL P LF A G+K GIL YGPPGTGKTL+A+A+A
Sbjct: 992 SVTWDDVGGLGNVKDAVMETIQLPLERPELF-AKGMKKRSGILFYGPPGTGKTLLAKAIA 1050
Query: 142 NETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E FF + GPE+++ GESE+N+R+ F+ A P ++F DELD++APKR
Sbjct: 1051 TEYSLNFFSVKGPELLNMYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKR 1104
>DICTYBASE|DDB_G0292788 [details] [associations]
symbol:pex6 "peroxin 6" species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007031 "peroxisome
organization" evidence=IEA;ISS] [GO:0005777 "peroxisome"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292788 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005777 GO:GO:0007031 GO:GO:0005778 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AAFI02000196 KO:K13339
RefSeq:XP_629463.1 ProteinModelPortal:Q54CS8
EnsemblProtists:DDB0238049 GeneID:8628853 KEGG:ddi:DDB_G0292788
OMA:ANRIKIS Uniprot:Q54CS8
Length = 1201
Score = 291 (107.5 bits), Expect = 2.6e-24, P = 2.6e-24
Identities = 54/113 (47%), Positives = 77/113 (68%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V +DD+GG ++I + ++LPL HP LF A G+ GILL+GPPGTGKTL+A+A+A
Sbjct: 916 VSWDDVGGLANVKSEIMDTIQLPLEHPHLF-ASGIGKRSGILLFGPPGTGKTLLAKAIAT 974
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
E F + GPE+++ GESE N+R+ F +A + P +IF DELD++AP R
Sbjct: 975 ECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKPCVIFFDELDSLAPSR 1027
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 287 (106.1 bits), Expect = 2.9e-24, P = 2.9e-24
Identities = 75/199 (37%), Positives = 107/199 (53%)
Query: 4 VPEGEMSNLFEVYLK-PYFLEAYRPVHKDDLFIVR-GGMRAVEFKIVDTDPAPYC----I 57
VP G++ NL E+ + P F+ A D +VR +RA D P P +
Sbjct: 387 VPTGDL-NLDEIASRTPGFVVA------DLAALVREAALRAASRASADGRP-PMLHQDDL 438
Query: 58 VAADTVIHCEGDPIKREEEEEAS-NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIG 116
+ A TVI P+ R +E + V DD+G + E V PL+HP F +G
Sbjct: 439 LGALTVIR----PLSRSASDEVTVGDVTLDDVGDMAAAKQALTEAVLWPLQHPDTFARLG 494
Query: 117 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAD 176
V+PPRG+LLYGPPG GKT + RA+A+ + G E+M K G SE +R+ F A
Sbjct: 495 VEPPRGVLLYGPPGCGKTFVVRALASTGQLSVHAVKGSELMDKWVGSSEKAVRELFRRAR 554
Query: 177 KNSPSIIFIDELDAIAPKR 195
++PS++F+DELDA+AP+R
Sbjct: 555 DSAPSLVFLDELDALAPRR 573
Score = 142 (55.0 bits), Expect = 4.2e-08, P = 4.2e-08
Identities = 33/115 (28%), Positives = 61/115 (53%)
Query: 79 ASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIAR 138
+S + +++ G + Q A++ E ++L L P L + +G G+L+ GP G GK + R
Sbjct: 206 SSPEIQIEELKGAQPQAAKLTEWLKLALDEPHLLQTLGAGTNLGVLVSGPAGVGKATLVR 265
Query: 139 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAP 193
AV + G ++GPEI + AG+ + A + A ++ ++ I + DA+ P
Sbjct: 266 AVCD--GRRLVTLDGPEIGALAAGDRVKAVASAVQ-AVRHEGGVLLITDADALLP 317
>UNIPROTKB|G4N7L8 [details] [associations]
symbol:MGG_06380 "ATPase family AAA domain-containing
protein 2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0017111 EMBL:CM001234
RefSeq:XP_003717194.1 EnsemblFungi:MGG_06380T0 GeneID:2684535
KEGG:mgr:MGG_06380 Uniprot:G4N7L8
Length = 1706
Score = 292 (107.8 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 57/118 (48%), Positives = 78/118 (66%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V + +GG + + Q+KEM+ LPL +P LF+ V PPRG+L +GPPGTGKTL+ARA++N
Sbjct: 617 VDFSKVGGLQGHIDQLKEMIMLPLLYPELFQRYKVTPPRGVLFHGPPGTGKTLLARALSN 676
Query: 143 ETGA-----FFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
G F++ G + +SK GE+E LR FEEA + PSIIF DE+D +AP R
Sbjct: 677 AVGIGGRKITFYMRKGADALSKWVGEAEKQLRLLFEEARRTQPSIIFFDEIDGLAPVR 734
>UNIPROTKB|J9NWB0 [details] [associations]
symbol:J9NWB0 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005937 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074818 EMBL:AAEX03014432
Ensembl:ENSCAFT00000039483 OMA:AGSELIQ Uniprot:J9NWB0
Length = 436
Score = 279 (103.3 bits), Expect = 3.4e-24, P = 3.4e-24
Identities = 56/125 (44%), Positives = 83/125 (66%)
Query: 71 IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPG 130
+K E+ E+A Y DI G Q+ +IKE +ELPL HP ++ +G+KPP+G++LYGPPG
Sbjct: 174 MKVEKVEKAPQET-YADIRGLDNQIQEIKESLELPLTHPENYEEMGIKPPKGVILYGPPG 232
Query: 131 TGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDA 190
T K AVAN T A F + G E++ K G+ +R++F A++++PSI+FIDE+DA
Sbjct: 233 TVK-----AVANRTSATFLRVAGSELIQKYLGDGPKVVRESFRVAEEHAPSIVFIDEIDA 287
Query: 191 IAPKR 195
I +R
Sbjct: 288 IGTRR 292
>UNIPROTKB|F1NN52 [details] [associations]
symbol:F1NN52 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 OMA:PSVYENG
GeneTree:ENSGT00550000074694 EMBL:AADN02022496 EMBL:AADN02022497
EMBL:AADN02022498 EMBL:AADN02022499 IPI:IPI00588479
Ensembl:ENSGALT00000026409 Uniprot:F1NN52
Length = 1337
Score = 290 (107.1 bits), Expect = 3.9e-24, P = 3.9e-24
Identities = 57/123 (46%), Positives = 80/123 (65%)
Query: 78 EASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIA 137
+ ++V +D +GG ++ +KEMV PL +P +F+ ++PPRG L YGPPGTGKTL+A
Sbjct: 356 QIDSSVRFDAVGGLSDHISALKEMVVFPLLYPEVFERFKIQPPRGCLFYGPPGTGKTLVA 415
Query: 138 RAVANETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIA 192
RA+ANE FF+ G + +SK GESE LR F++A + PSIIF DE+D +A
Sbjct: 416 RALANECSQGNRRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFDEIDGLA 475
Query: 193 PKR 195
P R
Sbjct: 476 PVR 478
>CGD|CAL0005974 [details] [associations]
symbol:PEX6 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 289 (106.8 bits), Expect = 4.0e-24, P = 4.0e-24
Identities = 54/113 (47%), Positives = 77/113 (68%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +I + +++PL+HP LF G+K GIL YGPPGTGKTL+A+A+A
Sbjct: 812 VKWEDIGGLDLVKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAKAIAT 870
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
FF + GPE+++ GESE+N+R+ F+ A P +IF DELD++APKR
Sbjct: 871 NFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKR 923
>UNIPROTKB|Q59ZE6 [details] [associations]
symbol:PEX6 "Likely peroxisomal biogenesis AAA ATPase Pex6"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 289 (106.8 bits), Expect = 4.0e-24, P = 4.0e-24
Identities = 54/113 (47%), Positives = 77/113 (68%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
V ++DIGG +I + +++PL+HP LF G+K GIL YGPPGTGKTL+A+A+A
Sbjct: 812 VKWEDIGGLDLVKDEILDTIDMPLKHPELFNN-GLKKRSGILFYGPPGTGKTLLAKAIAT 870
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
FF + GPE+++ GESE+N+R+ F+ A P +IF DELD++APKR
Sbjct: 871 NFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKR 923
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 284 (105.0 bits), Expect = 6.5e-24, P = 6.5e-24
Identities = 62/171 (36%), Positives = 95/171 (55%)
Query: 29 HKDDLFIVRGGMRAVEFKIVDTDPAPYCIVAADTVIHCEG-DPIKREEEEEASNAVGYDD 87
H DL V+ +R V + V++ ++ A T + +K + ++ V
Sbjct: 131 HLVDLSGVKAEIRCVLVEKVNSGSQRAGLITARTCVDISTIQTVKHLDRQQQQ--VSAAP 188
Query: 88 IGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAF 147
+GG A +KEM+ PLR+P + +G+ PRG+LL GPPG GKTL+ R VA + GA
Sbjct: 189 LGGMEDVFASLKEMITFPLRYPGSLRQLGLSCPRGLLLIGPPGVGKTLLVRCVAKDIGAT 248
Query: 148 FFLINGPEIMSKLAGESESNLRKAFEEA-DK--NSPSIIFIDELDAIAPKR 195
+NGPE+ GESE NLR+ FE+A D + P ++ IDE+D++ P+R
Sbjct: 249 LVTVNGPEVTGSRPGESEENLRRVFEQARDAADDGPCVLLIDEIDSLCPRR 299
Score = 256 (95.2 bits), Expect = 6.6e-21, P = 6.6e-21
Identities = 46/114 (40%), Positives = 72/114 (63%)
Query: 83 VGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVAN 142
+G++ IGG ++K+ +E P+R P F +GV PRG+LLYGPPG KT + +A A+
Sbjct: 449 IGWEQIGGLEDVKLKLKQSIEWPMRFPEAFVRLGVSRPRGVLLYGPPGCAKTTLVKAAAS 508
Query: 143 ETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKRE 196
+ FF ++G E+ S G+SE L + F +A +PSI+F+DE+D++ RE
Sbjct: 509 SSHCSFFSLSGAELFSPYVGDSEKTLAQLFAQARACAPSIVFLDEVDSMVGSRE 562
>UNIPROTKB|F1MEU3 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074694
EMBL:DAAA02031678 EMBL:DAAA02031679 EMBL:DAAA02031680
EMBL:DAAA02031681 IPI:IPI00687055 Ensembl:ENSBTAT00000012179
Uniprot:F1MEU3
Length = 1248
Score = 286 (105.7 bits), Expect = 9.4e-24, P = 9.4e-24
Identities = 58/119 (48%), Positives = 76/119 (63%)
Query: 82 AVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVA 141
+V +D IGG + +KEMV PL +P +F+ ++PPRG L YGPPGTGKTL+ARA+A
Sbjct: 286 SVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALA 345
Query: 142 NETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
NE FF+ G + +SK GESE LR F++A PSIIF DE+D +AP R
Sbjct: 346 NECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVR 404
>UNIPROTKB|J9NU31 [details] [associations]
symbol:ATAD2B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074694
EMBL:AAEX03010776 EMBL:AAEX03010777 EMBL:AAEX03010778
Ensembl:ENSCAFT00000043993 Uniprot:J9NU31
Length = 1291
Score = 286 (105.7 bits), Expect = 9.9e-24, P = 9.9e-24
Identities = 58/119 (48%), Positives = 76/119 (63%)
Query: 82 AVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVA 141
+V +D IGG + +KEMV PL +P +F+ ++PPRG L YGPPGTGKTL+ARA+A
Sbjct: 234 SVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALA 293
Query: 142 NETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
NE FF+ G + +SK GESE LR F++A PSIIF DE+D +AP R
Sbjct: 294 NECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVR 352
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 283 (104.7 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 54/116 (46%), Positives = 82/116 (70%)
Query: 81 NAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAV 140
++V ++D+GG L ++ +M+ + +RHP ++ +GV PPRG+LL+GPPG GKTL+A A+
Sbjct: 259 SSVKFEDVGGNDTTLKEVCKML-VHMRHPEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAI 317
Query: 141 ANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKRE 196
A E + EI+S ++GESE LR+ FE+A ++P I+FIDE+DAI PKRE
Sbjct: 318 AGELDLPILKVAATEIVSGVSGESEQKLRELFEQAVSSAPCILFIDEIDAITPKRE 373
Score = 257 (95.5 bits), Expect = 6.5e-21, P = 6.5e-21
Identities = 55/142 (38%), Positives = 82/142 (57%)
Query: 56 CIVAADTVIHCEG-DP-IKREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFK 113
CI D ++ P KRE N V + DIG ++ + L +P F+
Sbjct: 549 CIELNDFIVALSSVQPSAKREGFATVPN-VTWADIGALEDIREELTMAILFLLCNPDQFR 607
Query: 114 AIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFE 173
+G+ P G+LL GPPG GKTL+A+AVANE+G F + GPE+++ GESE +R+ F+
Sbjct: 608 VLGLVTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQ 667
Query: 174 EADKNSPSIIFIDELDAIAPKR 195
A ++P +IF DE+DA+ P+R
Sbjct: 668 RAKNSAPCVIFFDEVDALCPRR 689
>ZFIN|ZDB-GENE-110411-210 [details] [associations]
symbol:atad2b "ATPase family, AAA domain containing
2B" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
ZFIN:ZDB-GENE-110411-210 GO:GO:0005524 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074694 EMBL:CABZ01035125
EMBL:CABZ01035126 EMBL:CABZ01035127 EMBL:CABZ01035128
EMBL:CABZ01035129 EMBL:CABZ01035130 EMBL:CABZ01035131
EMBL:CABZ01035132 EMBL:CABZ01035133 EMBL:CABZ01035134
EMBL:CABZ01035135 EMBL:CABZ01035136 EMBL:CABZ01035137
EMBL:CABZ01035138 EMBL:FP103080 IPI:IPI00504895
Ensembl:ENSDART00000085416 ArrayExpress:E7FE14 Bgee:E7FE14
Uniprot:E7FE14
Length = 1402
Score = 286 (105.7 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 57/119 (47%), Positives = 76/119 (63%)
Query: 82 AVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVA 141
+V +D +GG + +KEMV PL +P +F+ ++PPRG L YGPPGTGKTL+ARA+A
Sbjct: 391 SVKFDSVGGLTHHIQSLKEMVVFPLLYPQVFEKFKIQPPRGCLFYGPPGTGKTLVARALA 450
Query: 142 NETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
NE FF+ G + +SK GESE LR F++A PSIIF DE+D +AP R
Sbjct: 451 NECSQGDRKVSFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVR 509
>UNIPROTKB|G4ML45 [details] [associations]
symbol:MGG_06686 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001231 KO:K14571
RefSeq:XP_003709393.1 ProteinModelPortal:G4ML45
EnsemblFungi:MGG_06686T0 GeneID:2684859 KEGG:mgr:MGG_06686
Uniprot:G4ML45
Length = 770
Score = 282 (104.3 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 54/125 (43%), Positives = 79/125 (63%)
Query: 72 KREEEEEASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGT 131
KRE N + ++G + +++ + P+ P F A+G+KP GILL+GPPG
Sbjct: 492 KREGFSTVPNTT-WSEVGALQNVRKKLEYAIVQPIERPEKFAALGIKPSAGILLWGPPGC 550
Query: 132 GKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAI 191
GKTL+A+AVAN + A F I GPE+++K GESE N+R+ F A ++P I+F DELDA+
Sbjct: 551 GKTLVAKAVANASKANFISIKGPELLNKYVGESEYNVRQLFSRAKSSAPCILFFDELDAL 610
Query: 192 APKRE 196
P R+
Sbjct: 611 VPTRD 615
Score = 228 (85.3 bits), Expect = 7.0e-18, P = 7.0e-18
Identities = 45/119 (37%), Positives = 75/119 (63%)
Query: 78 EASNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIA 137
E N +D+GG + L +++ + LPLR + +G KP ILL+GP GTGKT +
Sbjct: 189 EVFNGPKLEDMGGISQILEALEKPLVLPLRMGEEYARMGHKPQAAILLHGPSGTGKTAVV 248
Query: 138 RAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKRE 196
RA+A+ F ++ ++S ++GESE N+R+AF+EA + +P ++F+DE+D +A K +
Sbjct: 249 RALADTLQCAFVPVSATSLVSGISGESEKNIREAFDEAIRLAPCLLFLDEVDVVAGKMD 307
>UNIPROTKB|Q9ULI0 [details] [associations]
symbol:ATAD2B "ATPase family AAA domain-containing protein
2B" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IDA] InterPro:IPR001487 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297
SMART:SM00382 GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
HOVERGEN:HBG080873 HOGENOM:HOG000034119 EMBL:AC009242 EMBL:AC066692
EMBL:AC079924 EMBL:AK094821 EMBL:AK131301 EMBL:AB033066
IPI:IPI00456004 IPI:IPI00739581 RefSeq:NP_001229267.1
RefSeq:NP_060022.1 UniGene:Hs.467862 PDB:2DKW PDB:3LXJ PDBsum:2DKW
PDBsum:3LXJ ProteinModelPortal:Q9ULI0 SMR:Q9ULI0 PhosphoSite:Q9ULI0
DMDM:296439432 PaxDb:Q9ULI0 PRIDE:Q9ULI0 Ensembl:ENST00000238789
GeneID:54454 KEGG:hsa:54454 UCSC:uc002rei.4 UCSC:uc002rek.4
CTD:54454 GeneCards:GC02M023971 HGNC:HGNC:29230 HPA:HPA034555
neXtProt:NX_Q9ULI0 PharmGKB:PA162377039 InParanoid:Q9ULI0
OMA:NAQDFYH OrthoDB:EOG49KFQ1 EvolutionaryTrace:Q9ULI0
GenomeRNAi:54454 NextBio:56685 ArrayExpress:Q9ULI0 Bgee:Q9ULI0
CleanEx:HS_ATAD2B Genevestigator:Q9ULI0 GermOnline:ENSG00000119778
GO:GO:0070577 InterPro:IPR018359 Uniprot:Q9ULI0
Length = 1458
Score = 286 (105.7 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 58/119 (48%), Positives = 76/119 (63%)
Query: 82 AVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVA 141
+V +D IGG + +KEMV PL +P +F+ ++PPRG L YGPPGTGKTL+ARA+A
Sbjct: 396 SVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALA 455
Query: 142 NETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
NE FF+ G + +SK GESE LR F++A PSIIF DE+D +AP R
Sbjct: 456 NECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVR 514
>UNIPROTKB|E9PSU0 [details] [associations]
symbol:LOC500625 "Protein LOC500625" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 RGD:1566199 IPI:IPI00476926
Ensembl:ENSRNOT00000006877 ArrayExpress:E9PSU0 Uniprot:E9PSU0
Length = 1458
Score = 286 (105.7 bits), Expect = 1.2e-23, P = 1.2e-23
Identities = 58/119 (48%), Positives = 76/119 (63%)
Query: 82 AVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILLYGPPGTGKTLIARAVA 141
+V +D IGG + +KEMV PL +P +F+ ++PPRG L YGPPGTGKTL+ARA+A
Sbjct: 393 SVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGTGKTLVARALA 452
Query: 142 NETG-----AFFFLINGPEIMSKLAGESESNLRKAFEEADKNSPSIIFIDELDAIAPKR 195
NE FF+ G + +SK GESE LR F++A PSIIF DE+D +AP R
Sbjct: 453 NECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFDEIDGLAPVR 511
WARNING: HSPs involving 422 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.139 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 197 197 0.00082 111 3 11 22 0.49 32
31 0.44 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 672
No. of states in DFA: 550 (59 KB)
Total size of DFA: 144 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.23u 0.09s 21.32t Elapsed: 00:00:07
Total cpu time: 21.26u 0.10s 21.36t Elapsed: 00:00:08
Start: Thu Aug 15 16:47:13 2013 End: Thu Aug 15 16:47:21 2013
WARNINGS ISSUED: 2