Query psy621
Match_columns 289
No_of_seqs 360 out of 3003
Neff 8.6
Searched_HMMs 29240
Date Fri Aug 16 20:33:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy621.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/621hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ucz_A UBC7, ubiquitin conjuga 99.9 2.7E-24 9.3E-29 175.1 13.2 127 5-131 1-158 (165)
2 2e2c_A Ubiquitin conjugating e 99.9 6.4E-24 2.2E-28 171.3 11.8 129 1-131 1-148 (156)
3 4gpr_A Ubiquitin-conjugating e 99.9 9.3E-24 3.2E-28 169.4 12.4 125 6-131 2-144 (151)
4 3h8k_A Ubiquitin-conjugating e 99.9 1E-23 3.6E-28 171.6 12.3 126 6-131 1-157 (164)
5 1ayz_A UBC2, ubiquitin-conjuga 99.9 7.2E-24 2.5E-28 172.8 11.3 128 5-133 1-146 (169)
6 1zdn_A Ubiquitin-conjugating e 99.9 9.1E-24 3.1E-28 170.7 11.6 128 3-131 8-153 (158)
7 2c4o_A Ubiquitin-conjugating e 99.9 1.7E-23 5.7E-28 170.0 12.6 127 4-131 15-159 (165)
8 2aak_A UBC1, ubiquitin conjuga 99.9 1.4E-23 4.8E-28 168.6 11.4 126 5-131 1-144 (152)
9 2c2v_B Ubiquitin-conjugating e 99.9 5.7E-24 1.9E-28 171.2 8.9 126 5-131 2-145 (154)
10 2fo3_A Ubiquitin-conjugating e 99.9 1.3E-23 4.4E-28 163.2 10.6 82 168-286 6-88 (125)
11 1z2u_A Ubiquitin-conjugating e 99.9 2E-23 6.8E-28 167.4 11.4 125 6-131 2-144 (150)
12 2ayv_A Ubiquitin-conjugating e 99.9 2.9E-23 9.8E-28 168.7 12.1 126 5-131 18-161 (166)
13 2h2y_A Ubiquitin-conjugating e 99.9 3.8E-23 1.3E-27 162.7 12.4 84 167-287 19-103 (136)
14 1yh2_A HSPC150 protein similar 99.9 3.7E-23 1.3E-27 168.8 12.7 126 6-132 2-149 (169)
15 2awf_A Ubiquitin-conjugating e 99.9 2.2E-23 7.6E-28 170.5 11.3 100 4-103 13-127 (172)
16 2c2v_B Ubiquitin-conjugating e 99.9 2.1E-23 7.3E-28 167.8 10.9 83 168-287 5-87 (154)
17 1zdn_A Ubiquitin-conjugating e 99.9 3.7E-23 1.3E-27 167.1 11.9 84 166-286 11-94 (158)
18 4gpr_A Ubiquitin-conjugating e 99.9 3.7E-23 1.3E-27 166.0 11.7 83 167-286 3-85 (151)
19 1yh2_A HSPC150 protein similar 99.9 3.8E-23 1.3E-27 168.7 11.9 83 167-286 3-85 (169)
20 1jat_B Ubiquitin-conjugating e 99.9 4.7E-23 1.6E-27 162.8 12.0 85 168-288 6-93 (138)
21 1ayz_A UBC2, ubiquitin-conjuga 99.9 3.2E-23 1.1E-27 168.9 11.2 82 168-286 4-85 (169)
22 1z2u_A Ubiquitin-conjugating e 99.9 3.5E-23 1.2E-27 165.9 11.1 83 167-286 3-85 (150)
23 2ayv_A Ubiquitin-conjugating e 99.9 4.9E-23 1.7E-27 167.4 11.9 85 166-287 19-103 (166)
24 1jat_A Ubiquitin-conjugating e 99.9 3.3E-23 1.1E-27 166.9 10.8 125 6-131 3-145 (155)
25 2r0j_A Ubiquitin carrier prote 99.9 3.3E-23 1.1E-27 165.9 10.5 79 171-286 4-82 (149)
26 2e2c_A Ubiquitin conjugating e 99.9 5.9E-23 2E-27 165.6 12.0 83 167-286 8-90 (156)
27 2bep_A Ubiquitin-conjugating e 99.9 7.8E-23 2.7E-27 165.4 12.1 127 4-131 4-152 (159)
28 3h8k_A Ubiquitin-conjugating e 99.9 8.5E-23 2.9E-27 166.2 12.2 83 168-286 3-85 (164)
29 1yrv_A Ubiquitin-conjugating l 99.9 3.8E-23 1.3E-27 168.4 10.1 100 3-103 18-122 (169)
30 3rcz_B SUMO-conjugating enzyme 99.9 5.3E-23 1.8E-27 166.7 10.9 128 4-131 6-157 (163)
31 2aak_A UBC1, ubiquitin conjuga 99.9 6.3E-23 2.2E-27 164.8 11.2 82 168-286 4-85 (152)
32 3rcz_B SUMO-conjugating enzyme 99.9 4.7E-23 1.6E-27 167.0 10.4 85 165-286 7-96 (163)
33 2gjd_A Ubiquitin-conjugating e 99.9 4.7E-23 1.6E-27 166.3 10.4 127 5-131 1-151 (157)
34 2r0j_A Ubiquitin carrier prote 99.9 4.8E-23 1.6E-27 164.9 10.2 121 10-131 3-141 (149)
35 1i7k_A Ubiquitin-conjugating e 99.9 5.2E-23 1.8E-27 168.9 10.6 128 5-134 27-172 (179)
36 2fo3_A Ubiquitin-conjugating e 99.9 4.3E-23 1.5E-27 160.2 9.6 96 7-103 5-103 (125)
37 1yrv_A Ubiquitin-conjugating l 99.9 9.2E-23 3.1E-27 166.1 12.0 82 168-286 23-105 (169)
38 2c4o_A Ubiquitin-conjugating e 99.9 8.1E-23 2.8E-27 166.0 11.6 85 166-287 17-101 (165)
39 1fxt_A Ubiquitin-conjugating e 99.9 5.8E-23 2E-27 164.5 10.5 81 170-287 3-84 (149)
40 1i7k_A Ubiquitin-conjugating e 99.9 6.5E-23 2.2E-27 168.3 10.8 85 166-287 28-112 (179)
41 2pwq_A Ubiquitin conjugating e 99.9 1E-22 3.5E-27 171.7 12.3 85 166-287 21-105 (216)
42 2h2y_A Ubiquitin-conjugating e 99.9 7.9E-23 2.7E-27 160.9 10.9 97 6-103 18-117 (136)
43 1fxt_A Ubiquitin-conjugating e 99.9 2.6E-23 8.8E-28 166.5 8.0 123 9-131 2-143 (149)
44 2ucz_A UBC7, ubiquitin conjuga 99.9 1.3E-22 4.3E-27 165.3 12.2 83 168-286 4-86 (165)
45 2grr_A Ubiquitin-conjugating e 99.9 8.2E-23 2.8E-27 165.6 11.0 128 4-131 3-154 (161)
46 2awf_A Ubiquitin-conjugating e 99.9 1.5E-22 5E-27 165.6 12.2 86 165-286 14-99 (172)
47 3rz3_A Ubiquitin-conjugating e 99.9 1.5E-22 5E-27 167.3 12.3 85 166-286 5-89 (183)
48 2a7l_A Hypothetical ubiquitin- 99.9 9.3E-23 3.2E-27 160.2 10.2 81 171-286 25-107 (136)
49 1jat_A Ubiquitin-conjugating e 99.9 8.6E-23 3E-27 164.5 10.1 81 169-286 6-86 (155)
50 2pwq_A Ubiquitin conjugating e 99.9 1E-22 3.5E-27 171.7 10.5 129 4-133 19-166 (216)
51 3rz3_A Ubiquitin-conjugating e 99.9 1.6E-22 5.3E-27 167.1 10.8 100 4-103 3-117 (183)
52 2a7l_A Hypothetical ubiquitin- 99.9 5E-23 1.7E-27 161.7 7.4 94 10-103 24-122 (136)
53 3bzh_A Ubiquitin-conjugating e 99.9 2.9E-22 1E-26 166.5 12.4 124 7-131 47-188 (194)
54 2bep_A Ubiquitin-conjugating e 99.9 2.6E-22 9E-27 162.3 11.6 83 168-287 8-93 (159)
55 2f4z_A Tgtwinscan_2721 - E2 do 99.9 1.6E-22 5.3E-27 167.9 10.4 59 229-287 69-127 (193)
56 3bzh_A Ubiquitin-conjugating e 99.9 2.6E-22 8.8E-27 166.8 11.7 82 168-286 48-129 (194)
57 2a4d_A Ubiquitin-conjugating e 99.9 3.4E-22 1.2E-26 160.9 11.9 85 167-287 24-111 (160)
58 2q0v_A Ubiquitin-conjugating e 99.9 3.6E-22 1.2E-26 160.4 11.7 85 166-286 19-106 (156)
59 2f4z_A Tgtwinscan_2721 - E2 do 99.9 2.1E-22 7.1E-27 167.1 10.6 125 6-131 30-186 (193)
60 2gjd_A Ubiquitin-conjugating e 99.9 2.3E-22 7.8E-27 162.3 10.0 88 168-287 4-91 (157)
61 2y9m_A Ubiquitin-conjugating e 99.9 5.4E-22 1.9E-26 162.3 12.4 129 4-132 2-163 (172)
62 3k9o_A Ubiquitin-conjugating e 99.9 2.7E-22 9.3E-27 168.3 10.6 127 5-132 2-150 (201)
63 1wzv_A Ubiquitin-conjugating e 99.9 3.1E-22 1.1E-26 161.3 10.4 125 7-132 3-146 (155)
64 3k9o_A Ubiquitin-conjugating e 99.9 4.8E-22 1.6E-26 166.8 10.9 83 168-287 5-90 (201)
65 2grr_A Ubiquitin-conjugating e 99.9 3.8E-22 1.3E-26 161.7 9.8 87 168-286 7-93 (161)
66 3fn1_B NEDD8-conjugating enzym 99.9 6.1E-22 2.1E-26 161.5 11.0 127 4-131 10-161 (167)
67 3e46_A Ubiquitin-conjugating e 99.9 6.9E-22 2.3E-26 170.3 11.7 128 4-132 53-202 (253)
68 2onu_A Ubiquitin-conjugating e 99.9 3.9E-22 1.3E-26 159.9 8.8 59 229-287 23-81 (152)
69 2a4d_A Ubiquitin-conjugating e 99.9 1E-21 3.5E-26 158.1 10.6 100 4-103 21-128 (160)
70 1tte_A Ubiquitin-conjugating e 99.9 1.1E-22 3.7E-27 171.4 5.1 127 8-134 2-147 (215)
71 2hlw_A Ubiquitin-conjugating e 99.9 5.9E-22 2E-26 161.3 9.2 84 168-287 35-121 (170)
72 1y8x_A Ubiquitin-conjugating e 99.9 2E-21 7E-26 157.0 11.8 124 6-132 4-145 (160)
73 1wzv_A Ubiquitin-conjugating e 99.9 1.1E-21 3.9E-26 158.0 10.0 81 169-286 5-85 (155)
74 3fn1_B NEDD8-conjugating enzym 99.9 1.9E-21 6.6E-26 158.5 11.4 85 165-286 11-95 (167)
75 2y9m_A Ubiquitin-conjugating e 99.9 2.4E-21 8.3E-26 158.4 11.2 58 230-287 43-101 (172)
76 3e46_A Ubiquitin-conjugating e 99.9 2.3E-21 7.8E-26 167.0 11.4 84 167-287 56-142 (253)
77 2nvu_C NEDD8-conjugating enzym 99.9 2.6E-21 9E-26 159.1 10.9 127 4-133 22-166 (180)
78 4ds2_A Ubiquitin-conjugating e 99.9 1.4E-21 4.7E-26 159.3 9.0 58 229-286 44-103 (167)
79 1tte_A Ubiquitin-conjugating e 99.8 5.1E-22 1.7E-26 167.4 5.8 83 169-287 3-85 (215)
80 1c4z_D UBCH7, ubiquitin conjug 99.8 1.1E-21 3.7E-26 157.9 7.0 124 8-132 2-144 (154)
81 1y8x_A Ubiquitin-conjugating e 99.8 3.4E-21 1.2E-25 155.7 9.8 58 229-287 29-86 (160)
82 2nvu_C NEDD8-conjugating enzym 99.8 3.8E-21 1.3E-25 158.1 9.2 58 229-287 49-106 (180)
83 1jat_B Ubiquitin-conjugating e 99.8 4.2E-21 1.4E-25 151.6 8.5 97 6-103 4-108 (138)
84 2q0v_A Ubiquitin-conjugating e 99.8 5.7E-21 1.9E-25 153.4 9.2 99 4-103 17-123 (156)
85 1yf9_A Ubiquitin carrier prote 99.8 6.6E-21 2.2E-25 155.5 9.6 57 231-287 34-90 (171)
86 2z5d_A Ubiquitin-conjugating e 99.8 8.8E-21 3E-25 155.4 9.8 56 232-287 48-103 (179)
87 1c4z_D UBCH7, ubiquitin conjug 99.8 3.6E-21 1.2E-25 154.9 6.9 79 171-286 5-83 (154)
88 4ddg_A Ubiquitin-conjugating e 99.8 1.4E-20 4.8E-25 173.3 11.7 127 6-133 1-145 (399)
89 4ds2_A Ubiquitin-conjugating e 99.8 1.8E-21 6.2E-26 158.6 4.5 100 3-103 3-118 (167)
90 2hlw_A Ubiquitin-conjugating e 99.8 6.3E-21 2.1E-25 155.2 7.2 98 6-103 33-138 (170)
91 2f4w_A Ubiquitin-conjugating e 99.8 1.3E-20 4.3E-25 155.9 9.1 96 5-103 11-111 (187)
92 3o2u_A NEDD8-conjugating enzym 99.8 3.7E-20 1.3E-24 153.5 11.6 126 4-132 25-174 (190)
93 4ddg_A Ubiquitin-conjugating e 99.8 2.8E-20 9.5E-25 171.4 11.0 82 168-286 3-84 (399)
94 2onu_A Ubiquitin-conjugating e 99.8 4E-21 1.4E-25 154.0 4.0 121 8-132 2-142 (152)
95 2z5d_A Ubiquitin-conjugating e 99.8 1.5E-20 5.1E-25 154.0 7.1 120 8-132 25-164 (179)
96 3ceg_A Baculoviral IAP repeat- 99.8 5.9E-20 2E-24 162.5 10.7 88 166-286 74-166 (323)
97 1yf9_A Ubiquitin carrier prote 99.8 1.5E-20 5.2E-25 153.3 6.4 120 8-132 12-151 (171)
98 3ceg_A Baculoviral IAP repeat- 99.8 1.3E-19 4.6E-24 160.2 12.4 100 3-103 71-188 (323)
99 2f4w_A Ubiquitin-conjugating e 99.8 1.4E-19 5E-24 149.6 10.6 81 167-286 13-93 (187)
100 1zuo_A Hypothetical protein LO 99.8 4.5E-20 1.5E-24 152.4 6.9 99 4-103 23-140 (186)
101 3o2u_A NEDD8-conjugating enzym 99.8 2.7E-19 9.1E-24 148.4 9.7 57 229-286 55-114 (190)
102 1zuo_A Hypothetical protein LO 99.8 1.3E-19 4.3E-24 149.7 5.3 84 166-286 25-124 (186)
103 2z6o_A UFM1-conjugating enzyme 99.6 5E-17 1.7E-21 128.6 4.0 58 229-286 50-118 (172)
104 2z6o_A UFM1-conjugating enzyme 99.5 2E-15 6.7E-20 119.5 -0.4 79 10-95 34-125 (172)
105 3kpa_A Probable ubiquitin fold 99.1 5E-11 1.7E-15 92.0 3.0 55 232-286 55-120 (168)
106 3r3q_A Suppressor protein STP2 98.9 2.2E-09 7.7E-14 85.8 6.5 60 230-289 56-129 (162)
107 3kpa_A Probable ubiquitin fold 98.8 7.6E-09 2.6E-13 79.9 6.4 87 9-105 35-134 (168)
108 3obq_A Tumor susceptibility ge 98.5 1.9E-07 6.3E-12 73.4 6.6 55 230-289 49-111 (146)
109 3r3q_A Suppressor protein STP2 97.9 3E-05 1E-09 61.8 7.3 90 10-101 30-138 (162)
110 3obq_A Tumor susceptibility ge 96.3 0.0035 1.2E-07 49.0 4.2 60 36-101 51-120 (146)
111 2ebm_A RWD domain-containing p 90.6 0.41 1.4E-05 35.9 5.3 24 252-275 55-78 (128)
112 2yz0_A Serine/threonine-protei 89.4 1.1 3.7E-05 34.0 6.9 42 234-276 45-86 (138)
113 2day_A Ring finger protein 25; 88.4 1.3 4.3E-05 33.2 6.5 25 252-276 59-83 (128)
114 2ebk_A RWD domain-containing p 83.6 1.8 6.1E-05 32.3 5.2 41 234-275 39-79 (128)
115 1ukx_A GCN2, GCN2 EIF2alpha ki 81.7 0.77 2.6E-05 34.8 2.5 23 252-274 63-85 (137)
116 2dax_A Protein C21ORF6; RWD do 79.5 1.2 4.2E-05 34.4 3.0 24 253-276 74-97 (152)
117 2daw_A RWD domain containing p 78.6 1.9 6.7E-05 33.4 3.9 24 253-276 76-99 (154)
118 3u3c_B Paxillin LD2 peptide; 4 61.3 8.7 0.0003 19.4 2.6 22 7-28 4-25 (26)
119 3zqs_A E3 ubiquitin-protein li 35.9 35 0.0012 27.3 3.9 42 231-277 22-63 (186)
120 2kl8_A OR15; structural genomi 34.4 93 0.0032 20.0 6.2 61 119-186 10-70 (85)
121 2ebm_A RWD domain-containing p 26.2 1.8E+02 0.0062 20.8 6.9 64 9-75 11-76 (128)
122 4dac_A Computationally designe 22.5 72 0.0025 16.3 2.2 15 8-22 8-22 (28)
123 2bum_A Protocatechuate 3,4-dio 22.0 70 0.0024 25.9 3.4 26 250-275 109-139 (209)
No 1
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=99.91 E-value=2.7e-24 Score=175.11 Aligned_cols=127 Identities=22% Similarity=0.351 Sum_probs=106.8
Q ss_pred CChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceecccccc
Q psy621 5 PTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTK 82 (289)
Q Consensus 5 ~~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~ 82 (289)
|++.|.+||+||+++|++++++|+.+.+.+++|+++|++.|.||++|+|+||.|++.| +++||++||+++|.++++||
T Consensus 1 M~~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 80 (165)
T 2ucz_A 1 MSKTAQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHP 80 (165)
T ss_dssp -CHHHHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccC
Confidence 4568999999999999999999999998777899999999999999999999986655 89999999999999999999
Q ss_pred ceeccceeeCccc-------------cCccchHH---------HHHhhh-c-ccccccCC-----CchhhHHHHhHHh
Q psy621 83 TFEASSFISAPLY-------------TESWLRSF---------VSYVRR-N-QDFLNVTI-----DTREGFLKTLNDL 131 (289)
Q Consensus 83 ~~e~~~~~~~~~~-------------~~~Wl~~y---------~~~l~~-~-~~~~n~~~-----~~~~~F~~~l~~~ 131 (289)
|+..+|.+|++++ .+.|.+++ +++|.. + ++++|.++ ++++.|.+.++++
T Consensus 81 Nv~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~~~~~y~~~v~~~ 158 (165)
T 2ucz_A 81 NIYPNGEVCISILHSPGDDPNMYELAEERWSPVQSVEKILLSVMSMLSEPNIESGANIDACILWRDNRPEFERQVKLS 158 (165)
T ss_dssp TBCTTSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHHHHHHHHHHHHSCCGGGCCCHHHHHHHHTTHHHHHHHHHHH
T ss_pred CCCCCCcEeehhhCCccccccccCCCCCCCCCcCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHH
Confidence 9999999999998 57898874 333332 2 34444432 6788888888874
No 2
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=99.91 E-value=6.4e-24 Score=171.30 Aligned_cols=129 Identities=23% Similarity=0.347 Sum_probs=108.1
Q ss_pred CCCCC-ChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceec
Q psy621 1 MAQVP-TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQI 77 (289)
Q Consensus 1 m~~~~-~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~ 77 (289)
||+++ ++.+.+||+||+++|++++++|+.+.+ +++|+++|++.|.||++|+|+||.|++.+ +++||++||+++|.+
T Consensus 1 m~~~~~~~~~~~RL~kEl~~l~~~~~~~i~~~p-~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 79 (156)
T 2e2c_A 1 MTTSKERHSVSKRLQQELRTLLMSGDPGITAFP-DGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTT 79 (156)
T ss_dssp CCCCCSCCCHHHHHHHHHHHHHHHCCTTEEEEE-SSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred CCccccchHHHHHHHHHHHHHHhCCCCCEEEEE-CCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeC
Confidence 77644 667999999999999999999999997 66799999999999999999999986655 899999999999999
Q ss_pred cccccceeccceeeCccccCccchHH---------HHHhhh-c-ccccc-----cCCCchhhHHHHhHHh
Q psy621 78 ENLTKTFEASSFISAPLYTESWLRSF---------VSYVRR-N-QDFLN-----VTIDTREGFLKTLNDL 131 (289)
Q Consensus 78 ~~~~~~~e~~~~~~~~~~~~~Wl~~y---------~~~l~~-~-~~~~n-----~~~~~~~~F~~~l~~~ 131 (289)
+++|||+..+|.+|++++.+.|.+++ +++|.. + ++++| .. .+.+.|.+.++++
T Consensus 80 ~i~HPnv~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~pn~~~p~n~~aa~~~-~d~~~y~~~~~~~ 148 (156)
T 2e2c_A 80 PCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKKVLHEK 148 (156)
T ss_dssp CCCBTTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHTTSCCCSSCSCHHHHHHT-TCHHHHHHHHHHH
T ss_pred CcccCCCccCceEECccccccCCCCCcHHHHHHHHHHHHhCCCCCCHHHHHHHHHh-cCHHHHHHHHHHH
Confidence 99999999999999999999998874 333332 1 23333 23 6788888888874
No 3
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=99.90 E-value=9.3e-24 Score=169.42 Aligned_cols=125 Identities=22% Similarity=0.389 Sum_probs=106.0
Q ss_pred ChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceeccccccc
Q psy621 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTKT 83 (289)
Q Consensus 6 ~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~~ 83 (289)
++.|.+||+||+++|++++++|+.+.+ .++|+++|++.|.||++|+|+||.|++.+ +++||++||+++|.++++|||
T Consensus 2 a~~a~~RL~kEl~~l~~~~~~~i~~~p-~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 80 (151)
T 4gpr_A 2 AAMAMRRIQKELREIQQDPPCNCSAGP-VGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPN 80 (151)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEE-SSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEE-cCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccce
Confidence 678999999999999999999999997 56799999999999999999999986665 899999999999999999999
Q ss_pred eeccceeeCccccCccchHH---------HHHhhh-c-ccccccC-----CCchhhHHHHhHHh
Q psy621 84 FEASSFISAPLYTESWLRSF---------VSYVRR-N-QDFLNVT-----IDTREGFLKTLNDL 131 (289)
Q Consensus 84 ~e~~~~~~~~~~~~~Wl~~y---------~~~l~~-~-~~~~n~~-----~~~~~~F~~~l~~~ 131 (289)
+..+|.+|++++.+.|.+++ +.+|.. + ++++|.+ .++.+.|.+.++++
T Consensus 81 v~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~ar~~ 144 (151)
T 4gpr_A 81 INKNGVICLDILKDQWSPALTLSRVLLSISSLLTDPNPSDPLDPEVANVLRANKKQFEDTAREW 144 (151)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHCCCTTSCSSHHHHHHHHHCHHHHHHHHHHH
T ss_pred ECCCCEEEcccccCCCCCCCcHHHHHHHHHHHhcCCCCCCchhHHHHHHHHHCHHHHHHHHHHH
Confidence 99999999999999998884 333332 1 3344432 26778888888874
No 4
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=99.90 E-value=1e-23 Score=171.55 Aligned_cols=126 Identities=31% Similarity=0.488 Sum_probs=105.6
Q ss_pred ChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceeccccccc
Q psy621 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTKT 83 (289)
Q Consensus 6 ~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~~ 83 (289)
+++|.|||+|||++|++++++|+.+.+.+++|+++|++.|.||++|+|+||.|++.| +++||++||+++|.++++|||
T Consensus 1 a~~a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPN 80 (164)
T 3h8k_A 1 AGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPN 80 (164)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTT
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCC
Confidence 357899999999999999999999998777799999999999999999999986655 899999999999999999999
Q ss_pred eeccceeeCcccc-------------CccchHH---------HHHhhh-c-ccccccCC-----CchhhHHHHhHHh
Q psy621 84 FEASSFISAPLYT-------------ESWLRSF---------VSYVRR-N-QDFLNVTI-----DTREGFLKTLNDL 131 (289)
Q Consensus 84 ~e~~~~~~~~~~~-------------~~Wl~~y---------~~~l~~-~-~~~~n~~~-----~~~~~F~~~l~~~ 131 (289)
+..+|.+|++++. +.|.+++ +.+|.. + ++++|..+ ++.+.|.+.++++
T Consensus 81 V~~~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~ 157 (164)
T 3h8k_A 81 IYPDGRVCISILHAPGDDPMGYESSAERWSPVQSVEKILLSVVSMLAEPNDESGANVDASKMWRDDREQFYKIAKQI 157 (164)
T ss_dssp BCTTSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHHHHHHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHH
T ss_pred CCCCCcEeeecccCcccccccccccccCCCCCCcHHHHHHHHHHHHcCCCCCCccCHHHHHHHHHCHHHHHHHHHHH
Confidence 9999999999986 7898884 334432 1 33444332 5777788887774
No 5
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=99.90 E-value=7.2e-24 Score=172.79 Aligned_cols=128 Identities=23% Similarity=0.407 Sum_probs=106.1
Q ss_pred CChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceecccccc
Q psy621 5 PTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTK 82 (289)
Q Consensus 5 ~~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~ 82 (289)
|++.+.+||+|||++|++++++|+.+.+ .++|+++|++.|.||++|+|+||.|++.| +.+||++||+|+|.++++||
T Consensus 1 Ms~~a~~RL~kEl~~l~~~~~~gi~~~p-~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HP 79 (169)
T 1ayz_A 1 MSTPARRRLMRDFKRMKEDAPPGVSASP-LPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHP 79 (169)
T ss_dssp -CCHHHHHHHHHHHHHHHSCCTTEEEEE-ETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEe-cCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccC
Confidence 4558899999999999999999999997 57799999999999999999999986655 89999999999999999999
Q ss_pred ceeccceeeCccccCccchHH---------HHHhhh-c-ccccccC-----CCchhhHHHHhHHhhc
Q psy621 83 TFEASSFISAPLYTESWLRSF---------VSYVRR-N-QDFLNVT-----IDTREGFLKTLNDLWL 133 (289)
Q Consensus 83 ~~e~~~~~~~~~~~~~Wl~~y---------~~~l~~-~-~~~~n~~-----~~~~~~F~~~l~~~~~ 133 (289)
|+..+|.+|++++.+.|.+++ +++|.. + ++++|.. .++++.|.+.++++-.
T Consensus 80 NI~~~G~ICl~iL~~~WsP~~~i~~vL~si~~ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~~r~~~~ 146 (169)
T 1ayz_A 80 NVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVE 146 (169)
T ss_dssp TBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCCCCCeEeehhhccCCCCcCcHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHCHHHHHHHHHHHHH
Confidence 999999999999999998875 333332 1 3344433 2577788888887443
No 6
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=99.90 E-value=9.1e-24 Score=170.68 Aligned_cols=128 Identities=20% Similarity=0.319 Sum_probs=108.0
Q ss_pred CCCChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceecccc
Q psy621 3 QVPTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENL 80 (289)
Q Consensus 3 ~~~~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~ 80 (289)
..++..+.+||+|||++|++++++|+.+.+ +++|+++|++.|.||++|+|+||.|++.+ +++||++||+++|.++++
T Consensus 8 ~~~s~~~~~RL~kEl~~l~~~~~~gi~~~~-~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 86 (158)
T 1zdn_A 8 ENLPPHIIRLVYKEVTTLTADPPDGIKVFP-NEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIF 86 (158)
T ss_dssp CCSCHHHHHHHHHHHHHHHHSCCTTEEEEE-CSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCC
T ss_pred cccCHHHHHHHHHHHHHHHhCCCCCEEEEE-CCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcc
Confidence 467888999999999999999999999996 77899999999999999999999986665 899999999999999999
Q ss_pred ccceeccceeeCccccCccchHH---------HHHhhh-c-ccccccCC-----CchhhHHHHhHHh
Q psy621 81 TKTFEASSFISAPLYTESWLRSF---------VSYVRR-N-QDFLNVTI-----DTREGFLKTLNDL 131 (289)
Q Consensus 81 ~~~~e~~~~~~~~~~~~~Wl~~y---------~~~l~~-~-~~~~n~~~-----~~~~~F~~~l~~~ 131 (289)
|||+..+|.+|++++.+.|.+++ +.+|.. + ++++|.++ ++++.|.+.++++
T Consensus 87 HPnv~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~a~~~ 153 (158)
T 1zdn_A 87 HPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLL 153 (158)
T ss_dssp CTTBCTTSBBCHHHHTTTCCTTCCHHHHHHHHHHHHHSCCGGGCSSHHHHHHHHHCHHHHHHHHHHH
T ss_pred cCCCCCCCEEehhhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHH
Confidence 99999999999999989998874 333332 2 34444432 5777788887773
No 7
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=99.90 E-value=1.7e-23 Score=170.04 Aligned_cols=127 Identities=24% Similarity=0.386 Sum_probs=105.9
Q ss_pred CCChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceeccccc
Q psy621 4 VPTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLT 81 (289)
Q Consensus 4 ~~~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~ 81 (289)
...+.+.+||+||+++|++++++|+.+.+ .++|+++|.+.|.||++|+|+||.|.+.| +++||++||+|+|.++++|
T Consensus 15 ~~~~~~~~RL~kEl~~l~~~~~~gi~~~p-~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~H 93 (165)
T 2c4o_A 15 PRGSMALKRIHKELNDLARDPPAQCSAGP-VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYH 93 (165)
T ss_dssp -CCHHHHHHHHHHHHHHHSSCCTTEEEEE-SSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCB
T ss_pred cCCcHHHHHHHHHHHHHHhCCCCCEEEEE-cCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcC
Confidence 45667999999999999999999999997 66799999999999999999999886655 8999999999999999999
Q ss_pred cceeccceeeCccccCccchHH---------HHHhhh-c-ccccccCC-----CchhhHHHHhHHh
Q psy621 82 KTFEASSFISAPLYTESWLRSF---------VSYVRR-N-QDFLNVTI-----DTREGFLKTLNDL 131 (289)
Q Consensus 82 ~~~e~~~~~~~~~~~~~Wl~~y---------~~~l~~-~-~~~~n~~~-----~~~~~F~~~l~~~ 131 (289)
||+..+|.+|++++.+.|.+++ +++|.. + ++++|.++ ++++.|.+.++++
T Consensus 94 PnV~~~G~ICl~iL~~~W~P~~ti~~vL~si~~ll~~pn~~~P~n~~aa~~~~~d~~~y~~~ar~~ 159 (165)
T 2c4o_A 94 PNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREW 159 (165)
T ss_dssp TTBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHH
T ss_pred CcCCCCCeEeehhhcCCCCCcCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998874 344432 2 33444332 5777788887774
No 8
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=99.90 E-value=1.4e-23 Score=168.61 Aligned_cols=126 Identities=23% Similarity=0.430 Sum_probs=105.2
Q ss_pred CChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceecccccc
Q psy621 5 PTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTK 82 (289)
Q Consensus 5 ~~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~ 82 (289)
|++.+.+||+||+++|++++++|+.+.+ .++|+++|++.|.||++|+|+||.|++.+ +++||++||+++|.++++||
T Consensus 1 Ms~~a~~RL~~E~~~l~~~~~~~i~~~~-~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 79 (152)
T 2aak_A 1 MSTPARKRLMRDFKRLQQDPPAGISGAP-QDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHP 79 (152)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTEEEEE-ETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEe-CCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccC
Confidence 4568999999999999999999999986 57799999999999999999999986655 89999999999999999999
Q ss_pred ceeccceeeCccccCccchHH---------HHHhhh-c-ccccccCC-----CchhhHHHHhHHh
Q psy621 83 TFEASSFISAPLYTESWLRSF---------VSYVRR-N-QDFLNVTI-----DTREGFLKTLNDL 131 (289)
Q Consensus 83 ~~e~~~~~~~~~~~~~Wl~~y---------~~~l~~-~-~~~~n~~~-----~~~~~F~~~l~~~ 131 (289)
|+..+|.+|++++.+.|.+++ +++|.. + ++++|..+ ++++.|.+.++++
T Consensus 80 nv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~ 144 (152)
T 2aak_A 80 NIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEAARMYSESKREYNRRVRDV 144 (152)
T ss_dssp TBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHTSCCTTSCSSHHHHHHHHHCHHHHHHHHHHH
T ss_pred CCCCCCEEechhhcCCCCCCCcHHHHHHHHHHHHhCCCCCccccHHHHHHHHHCHHHHHHHHHHH
Confidence 999999999999999998875 333332 1 33444332 5677788887774
No 9
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=99.90 E-value=5.7e-24 Score=171.16 Aligned_cols=126 Identities=21% Similarity=0.323 Sum_probs=104.5
Q ss_pred CChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceecccccc
Q psy621 5 PTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTK 82 (289)
Q Consensus 5 ~~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~ 82 (289)
||.++.+||+||+++|++++++|+.+.+ .++|+++|++.|.||++|+|+||.|++.+ +++||++||+++|.++++||
T Consensus 2 ~s~~~~~RL~kEl~~l~~~~~~~i~~~~-~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 80 (154)
T 2c2v_B 2 GSAGLPRRIIKETQRLLAEPVPGIKAEP-DESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHP 80 (154)
T ss_dssp CSCSCCHHHHHHHHHHHHSCCTTEEEEE-CSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCT
T ss_pred ccHHHHHHHHHHHHHHHhCCCCCEEEEE-CCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccC
Confidence 4667889999999999999999999997 66799999999999999999999986655 89999999999999999999
Q ss_pred ceeccceeeCccccCccchHH---------HHHhhh-c-ccccccCC-----CchhhHHHHhHHh
Q psy621 83 TFEASSFISAPLYTESWLRSF---------VSYVRR-N-QDFLNVTI-----DTREGFLKTLNDL 131 (289)
Q Consensus 83 ~~e~~~~~~~~~~~~~Wl~~y---------~~~l~~-~-~~~~n~~~-----~~~~~F~~~l~~~ 131 (289)
|+..+|.+|++++.+.|.+++ +++|.. + ++++|.++ ++++.|.+.++++
T Consensus 81 nv~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~d~~~f~~~ar~~ 145 (154)
T 2c2v_B 81 NVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDPLANDVAEQWKTNEAQAIETARAW 145 (154)
T ss_dssp TBCTTCBBCCHHHHTSCCTTCCHHHHHHHHHHHTTSCCCCCC--CHHHHHHHHHHHHHHHHHHHH
T ss_pred cCccCCeEEchhccCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHH
Confidence 999999999999989998874 333332 1 33444332 5677788887774
No 10
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=99.90 E-value=1.3e-23 Score=163.21 Aligned_cols=82 Identities=32% Similarity=0.582 Sum_probs=72.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCCC
Q psy621 168 NMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPDT 247 (289)
Q Consensus 168 ~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~t 247 (289)
...+|+++|++++.++.+.++.+. ++++|+++|+++|.||++|
T Consensus 6 ~a~~RL~kEl~~l~~~~~~~~~~~-------------------------------------~~~~~l~~w~~~i~GP~~t 48 (125)
T 2fo3_A 6 NANYRIQKELHNFLNNPPINCTLD-------------------------------------VHPNNIRIWIVKYVGLENT 48 (125)
T ss_dssp ---CHHHHHHHHHHHSCCTTEEEE-------------------------------------ECTTCTTEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEE-------------------------------------eCcchhhhhheEEeCCCCC
Confidence 345799999999998876666654 5778999999999999999
Q ss_pred CCCCCEEEEEEEcCCCCCCCCCeEEEecCC-cCCCCCCCC
Q psy621 248 LYQGGYFKAHMKFPIDYPYSPPTIRFLTKV-WHPNVYEGT 286 (289)
Q Consensus 248 ~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i-~hpnv~~~~ 286 (289)
||+||.|+++|.||++||++||+|+|.|++ |||||+.+|
T Consensus 49 pYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G 88 (125)
T 2fo3_A 49 IYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYSNG 88 (125)
T ss_dssp TTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCTTS
T ss_pred CcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCCCC
Confidence 999999999999999999999999999997 999999765
No 11
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=99.90 E-value=2e-23 Score=167.39 Aligned_cols=125 Identities=23% Similarity=0.400 Sum_probs=104.4
Q ss_pred ChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceeccccccc
Q psy621 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTKT 83 (289)
Q Consensus 6 ~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~~ 83 (289)
|..+.+||+||+++|++++++|+.+.+ .++|+++|++.|.||++|+|+||.|++.+ +++||++||+++|.++++|||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~~~~~~~-~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (150)
T 1z2u_A 2 SHMALKRIQKELQDLGRDPPAQCSAGP-VGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 80 (150)
T ss_dssp CCHHHHHHHHHHHHHHHSCCSSEEEEE-ETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEE-CCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCc
Confidence 567899999999999999999999997 55799999999999999999999886655 899999999999999999999
Q ss_pred eeccceeeCccccCccchHH---------HHHhhh-c-ccccccC-----CCchhhHHHHhHHh
Q psy621 84 FEASSFISAPLYTESWLRSF---------VSYVRR-N-QDFLNVT-----IDTREGFLKTLNDL 131 (289)
Q Consensus 84 ~e~~~~~~~~~~~~~Wl~~y---------~~~l~~-~-~~~~n~~-----~~~~~~F~~~l~~~ 131 (289)
+..+|.+|++++.+.|.+++ +++|.. + ++++|.. .++++.|.+.++++
T Consensus 81 v~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~pn~~~p~n~~aa~~~~~~~~~f~~~~~~~ 144 (150)
T 1z2u_A 81 INSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQLAREW 144 (150)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHH
T ss_pred CCCCCeEeeccccCCCCCCCCHHHHHHHHHHHhhCCCCCCccCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998874 334432 1 3344433 25677788877763
No 12
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.90 E-value=2.9e-23 Score=168.73 Aligned_cols=126 Identities=22% Similarity=0.390 Sum_probs=104.9
Q ss_pred CChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceecccccc
Q psy621 5 PTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTK 82 (289)
Q Consensus 5 ~~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~ 82 (289)
.++.+.+||+||+++|++++++|+.+.+ +++|+++|.+.|.||++|+|+||.|.+.| +++||++||+|+|.++++||
T Consensus 18 ~~~~~~~RL~kEl~~l~~~~~~gi~~~~-~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 96 (166)
T 2ayv_A 18 YFQGALKRINKELNDLSKDPPTNCSAGP-VGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHP 96 (166)
T ss_dssp -CTTHHHHHHHHHHHHHHSCCTTEEEEE-CSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBT
T ss_pred cCcHHHHHHHHHHHHHHhCCCCCEEEEE-cCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCC
Confidence 4556889999999999999999999997 67799999999999999999999986655 89999999999999999999
Q ss_pred ceeccceeeCccccCccchHH---------HHHhhh-c-ccccccCC-----CchhhHHHHhHHh
Q psy621 83 TFEASSFISAPLYTESWLRSF---------VSYVRR-N-QDFLNVTI-----DTREGFLKTLNDL 131 (289)
Q Consensus 83 ~~e~~~~~~~~~~~~~Wl~~y---------~~~l~~-~-~~~~n~~~-----~~~~~F~~~l~~~ 131 (289)
|+..+|.+|++++.+.|.+++ +++|.. + ++++|..+ ++++.|.+.++++
T Consensus 97 NI~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pn~~~Pln~~aa~l~~~d~~~f~~~ar~~ 161 (166)
T 2ayv_A 97 NINSQGAICLDILKDQWSPALTISKVLLSISSLLTDPNPDDPLVPEIAHLYKSDRMRYDQTAREW 161 (166)
T ss_dssp TBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHH
T ss_pred cCCCCCeEEcccccccCCCCCcHHHHHHHHHHHHhCCCCCchhhHHHHHHHHHCHHHHHHHHHHH
Confidence 999999999999999998875 333332 1 33444332 5777788877763
No 13
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=99.89 E-value=3.8e-23 Score=162.75 Aligned_cols=84 Identities=31% Similarity=0.581 Sum_probs=75.4
Q ss_pred chHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCC
Q psy621 167 GNMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPD 246 (289)
Q Consensus 167 ~~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~ 246 (289)
....+|+++|++++.++.+.++.+. ++++|+++|+++|.||++
T Consensus 19 ~~~~~RL~kEl~~l~~~~~~~~~~~-------------------------------------~~~~nl~~W~~~I~GP~~ 61 (136)
T 2h2y_A 19 GNANYRIQKELNNFLKNPPINCTID-------------------------------------VHPSNIRIWIVQYVGLEN 61 (136)
T ss_dssp TSHHHHHHHHHHHHHHSCCTTEEEE-------------------------------------ECTTCTTEEEEEEECCTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCeEEE-------------------------------------eccccccccEEEEECCCC
Confidence 3566899999999998876666654 567899999999999999
Q ss_pred CCCCCCEEEEEEEcCCCCCCCCCeEEEecCC-cCCCCCCCCC
Q psy621 247 TLYQGGYFKAHMKFPIDYPYSPPTIRFLTKV-WHPNVYEGTA 287 (289)
Q Consensus 247 t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i-~hpnv~~~~~ 287 (289)
|||+||.|+++|.||++||++||+|+|.|++ |||||+.+|.
T Consensus 62 tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~~G~ 103 (136)
T 2h2y_A 62 TIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYSNGD 103 (136)
T ss_dssp STTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCTTCC
T ss_pred CceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCCCCE
Confidence 9999999999999999999999999999997 9999998653
No 14
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.89 E-value=3.7e-23 Score=168.83 Aligned_cols=126 Identities=20% Similarity=0.274 Sum_probs=106.2
Q ss_pred ChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceeccccccc
Q psy621 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTKT 83 (289)
Q Consensus 6 ~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~~ 83 (289)
|+++.+||+||+++|++++++|+.+.+ +++|+++|++.|.||++|+|+||.|++.+ +++||++||+|+|.++++|||
T Consensus 2 s~~~~~RL~kEl~~l~~~~~~gi~~~~-~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPN 80 (169)
T 1yh2_A 2 SMQRASRLKRELHMLATEPPPGITCWQ-DKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPN 80 (169)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEEE-SSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEEe-CCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCcccc
Confidence 678999999999999999999999996 77899999999999999999999886655 899999999999999999999
Q ss_pred eeccceeeCcccc----CccchHH---------HHHhhh-c-ccccccCC-----CchhhHHHHhHHhh
Q psy621 84 FEASSFISAPLYT----ESWLRSF---------VSYVRR-N-QDFLNVTI-----DTREGFLKTLNDLW 132 (289)
Q Consensus 84 ~e~~~~~~~~~~~----~~Wl~~y---------~~~l~~-~-~~~~n~~~-----~~~~~F~~~l~~~~ 132 (289)
+..+|.+|++++. +.|.+++ +++|.. + ++++|.++ ++.+.|.+.++++-
T Consensus 81 v~~~G~iCl~iL~~~~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~ 149 (169)
T 1yh2_A 81 IDSAGRICLDVLKLPPKGAWRPSLNIATVLTSIQLLMSEPNPDDPLMADISSEFKYNKPAFLKNARQWT 149 (169)
T ss_dssp BCTTCBBCCGGGSCTTTSCCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCcCCeEecccccCCcccCCCCCCcHHHHHHHHHHHHhCCCCcchHhHHHHHHHHhhHHHHHHHHHHHH
Confidence 9999999999987 8998885 333332 1 33444332 57788888888743
No 15
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=99.89 E-value=2.2e-23 Score=170.47 Aligned_cols=100 Identities=31% Similarity=0.573 Sum_probs=91.7
Q ss_pred CCChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceeccccc
Q psy621 4 VPTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLT 81 (289)
Q Consensus 4 ~~~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~ 81 (289)
..++.+.+||+|||++|++++++|+.+.+.+++|+++|.+.|.||++|+|+||.|.+.| +++||++||+|+|.++++|
T Consensus 13 ~~~~~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~H 92 (172)
T 2awf_A 13 GLVPRGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWH 92 (172)
T ss_dssp CCCCTTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCC
T ss_pred CChHHHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCcc
Confidence 45678999999999999999999999998777899999999999999999999986655 8999999999999999999
Q ss_pred cceeccceeeCcccc-------------CccchHH
Q psy621 82 KTFEASSFISAPLYT-------------ESWLRSF 103 (289)
Q Consensus 82 ~~~e~~~~~~~~~~~-------------~~Wl~~y 103 (289)
||+..+|.+|++++. +.|.+++
T Consensus 93 PNV~~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ 127 (172)
T 2awf_A 93 PNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIH 127 (172)
T ss_dssp TTBCTTCBBCCGGGSCC---------CTTSCCTTC
T ss_pred CCCCCCCcEehhhcCCcccccccccccCCCCCCcC
Confidence 999999999999985 6898874
No 16
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=99.89 E-value=2.1e-23 Score=167.79 Aligned_cols=83 Identities=31% Similarity=0.628 Sum_probs=75.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCCC
Q psy621 168 NMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPDT 247 (289)
Q Consensus 168 ~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~t 247 (289)
...+|+++|++++.++.+.++.+. +.++|+++|+++|.||++|
T Consensus 5 ~~~~RL~kEl~~l~~~~~~~i~~~-------------------------------------~~~~~l~~w~~~i~GP~~t 47 (154)
T 2c2v_B 5 GLPRRIIKETQRLLAEPVPGIKAE-------------------------------------PDESNARYFHVVIAGPQDS 47 (154)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEE-------------------------------------ECSSCTTEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEE-------------------------------------ECCCchheEEEEEECCCCC
Confidence 345799999999999877777765 5678999999999999999
Q ss_pred CCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCCC
Q psy621 248 LYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGTA 287 (289)
Q Consensus 248 ~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~~ 287 (289)
||+||+|+++|.||++||++||+|+|.|+||||||+.+|.
T Consensus 48 pyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~ 87 (154)
T 2c2v_B 48 PFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKLGR 87 (154)
T ss_dssp TTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTCB
T ss_pred CcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCccCCe
Confidence 9999999999999999999999999999999999997753
No 17
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=99.89 E-value=3.7e-23 Score=167.11 Aligned_cols=84 Identities=33% Similarity=0.603 Sum_probs=76.5
Q ss_pred CchHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCC
Q psy621 166 DGNMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPP 245 (289)
Q Consensus 166 ~~~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~ 245 (289)
+....+|+++|++++.++.+.++.+. ++++|+++|+++|.||+
T Consensus 11 s~~~~~RL~kEl~~l~~~~~~gi~~~-------------------------------------~~~~~l~~w~~~i~Gp~ 53 (158)
T 1zdn_A 11 PPHIIRLVYKEVTTLTADPPDGIKVF-------------------------------------PNEEDLTDLQVTIEGPE 53 (158)
T ss_dssp CHHHHHHHHHHHHHHHHSCCTTEEEE-------------------------------------ECSSCTTEEEEEEECCT
T ss_pred CHHHHHHHHHHHHHHHhCCCCCEEEE-------------------------------------ECCCChhheeEEEECCC
Confidence 34566899999999999877777765 57889999999999999
Q ss_pred CCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 246 DTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 246 ~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
+|||+||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 54 ~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G 94 (158)
T 1zdn_A 54 GTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANG 94 (158)
T ss_dssp TSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTS
T ss_pred CCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCCC
Confidence 99999999999999999999999999999999999999875
No 18
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=99.89 E-value=3.7e-23 Score=165.95 Aligned_cols=83 Identities=39% Similarity=0.786 Sum_probs=75.6
Q ss_pred chHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCC
Q psy621 167 GNMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPD 246 (289)
Q Consensus 167 ~~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~ 246 (289)
....+|+++|++++.++.+.++.+. +.++|+++|+++|.||++
T Consensus 3 ~~a~~RL~kEl~~l~~~~~~~i~~~-------------------------------------p~~~nl~~w~~~i~Gp~~ 45 (151)
T 4gpr_A 3 AMAMRRIQKELREIQQDPPCNCSAG-------------------------------------PVGDDIFHWTATITGPDD 45 (151)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEE-------------------------------------ESSSCTTEEEEEEECCSS
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEE-------------------------------------EcCCCceEEEEEEeCCCC
Confidence 3456899999999999877777765 567899999999999999
Q ss_pred CCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 247 TLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 247 t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
|||+||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 46 tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G 85 (151)
T 4gpr_A 46 SPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINKNG 85 (151)
T ss_dssp STTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTC
T ss_pred CCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECCCC
Confidence 9999999999999999999999999999999999999755
No 19
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.89 E-value=3.8e-23 Score=168.74 Aligned_cols=83 Identities=30% Similarity=0.616 Sum_probs=75.7
Q ss_pred chHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCC
Q psy621 167 GNMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPD 246 (289)
Q Consensus 167 ~~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~ 246 (289)
....+|+++|++++.++.+.++.+. ++++|+++|+++|.||++
T Consensus 3 ~~~~~RL~kEl~~l~~~~~~gi~~~-------------------------------------~~~~~l~~w~~~I~GP~~ 45 (169)
T 1yh2_A 3 MQRASRLKRELHMLATEPPPGITCW-------------------------------------QDKDQMDDLRAQILGGAN 45 (169)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEE-------------------------------------ESSSCTTEEEEEEECCTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEE-------------------------------------eCCCchheEEEEEECCCC
Confidence 3556899999999999877777765 578899999999999999
Q ss_pred CCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 247 TLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 247 t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
|||+||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 46 tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G 85 (169)
T 1yh2_A 46 TPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSAG 85 (169)
T ss_dssp STTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTC
T ss_pred CCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCcCC
Confidence 9999999999999999999999999999999999999765
No 20
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.89 E-value=4.7e-23 Score=162.81 Aligned_cols=85 Identities=22% Similarity=0.421 Sum_probs=71.4
Q ss_pred hHHHHHHHHHHHHHHh-CCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCC--CcceEEEEEeCC
Q psy621 168 NMEKEMVKELRRIAHE-SSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDD--NLFEWEVAIFGP 244 (289)
Q Consensus 168 ~~~~~~~~~~r~ia~~-~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~--~~~~w~~~i~gp 244 (289)
.+.+|+++|++++.++ .+.++.+.- .+++ |+++|+++|.||
T Consensus 6 ~~~~RL~kEl~~l~~~~~~~~~~~~~------------------------------------~~~~d~nl~~w~~~i~GP 49 (138)
T 1jat_B 6 PRNFRLLEELEKGEKGFGPESCSYGL------------------------------------ADSDDITMTKWNGTILGP 49 (138)
T ss_dssp CHHHHHHHHHHHHHC----CCEEEEE------------------------------------SSTTCTTCCEEEEEEECC
T ss_pred HHHHHHHHHHHHHHhcCCCCCEEEEe------------------------------------CCCCCCcceEEEEEEECC
Confidence 4557999999999887 455665541 2333 699999999999
Q ss_pred CCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCCCc
Q psy621 245 PDTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGTAQ 288 (289)
Q Consensus 245 ~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~~~ 288 (289)
++|||+||+|+++|.||++||++||+|+|.|+||||||+.+||.
T Consensus 50 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~~G~ 93 (138)
T 1jat_B 50 PHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPTTGE 93 (138)
T ss_dssp SSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTCB
T ss_pred CCCCccceEEEEEEECCCCCCCCCCceEEEcccccCCEeCCCCE
Confidence 99999999999999999999999999999999999999998664
No 21
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=99.89 E-value=3.2e-23 Score=168.93 Aligned_cols=82 Identities=32% Similarity=0.752 Sum_probs=74.9
Q ss_pred hHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCCC
Q psy621 168 NMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPDT 247 (289)
Q Consensus 168 ~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~t 247 (289)
...+|+++|++++.++.+.++.+. +.++|+++|+++|.||++|
T Consensus 4 ~a~~RL~kEl~~l~~~~~~gi~~~-------------------------------------p~~~nl~~W~~~I~GP~~t 46 (169)
T 1ayz_A 4 PARRRLMRDFKRMKEDAPPGVSAS-------------------------------------PLPDNVMVWNAMIIGPADT 46 (169)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEE-------------------------------------EETTEEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEE-------------------------------------ecCCccccceEEEECCCCC
Confidence 456899999999998877777765 5678999999999999999
Q ss_pred CCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 248 LYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 248 ~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
||+||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 47 pYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~G 85 (169)
T 1ayz_A 47 PYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANG 85 (169)
T ss_dssp TTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTS
T ss_pred CcCCCEEEEEEECcccCCCCCCccccccCCccCCCCCCC
Confidence 999999999999999999999999999999999999855
No 22
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=99.89 E-value=3.5e-23 Score=165.91 Aligned_cols=83 Identities=36% Similarity=0.785 Sum_probs=75.0
Q ss_pred chHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCC
Q psy621 167 GNMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPD 246 (289)
Q Consensus 167 ~~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~ 246 (289)
....+|+++|++++.++.+.++.+. +.++|+++|+++|.||++
T Consensus 3 ~~~~~RL~kEl~~l~~~~~~~~~~~-------------------------------------~~~~~l~~w~~~i~Gp~~ 45 (150)
T 1z2u_A 3 HMALKRIQKELQDLGRDPPAQCSAG-------------------------------------PVGDDLFHWQATIMGPPE 45 (150)
T ss_dssp CHHHHHHHHHHHHHHHSCCSSEEEE-------------------------------------EETTEEEEEEEEEECCTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEE-------------------------------------ECCCcceEEEEEEECCCC
Confidence 3456899999999998877676664 466899999999999999
Q ss_pred CCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 247 TLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 247 t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
|||+||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 46 tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G 85 (150)
T 1z2u_A 46 SPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNG 85 (150)
T ss_dssp STTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTC
T ss_pred CCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCCCC
Confidence 9999999999999999999999999999999999999865
No 23
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.89 E-value=4.9e-23 Score=167.39 Aligned_cols=85 Identities=36% Similarity=0.740 Sum_probs=76.4
Q ss_pred CchHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCC
Q psy621 166 DGNMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPP 245 (289)
Q Consensus 166 ~~~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~ 245 (289)
.....+|+++|++++.++.+.++.+. ++++|+++|+++|.||+
T Consensus 19 ~~~~~~RL~kEl~~l~~~~~~gi~~~-------------------------------------~~~~nl~~W~~~I~GP~ 61 (166)
T 2ayv_A 19 FQGALKRINKELNDLSKDPPTNCSAG-------------------------------------PVGDDMFHWQATIMGPE 61 (166)
T ss_dssp CTTHHHHHHHHHHHHHHSCCTTEEEE-------------------------------------ECSSCTTEEEEEEECCT
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEE-------------------------------------EcCCCcceeeEEEECCC
Confidence 34566899999999998877777665 56789999999999999
Q ss_pred CCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCCC
Q psy621 246 DTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGTA 287 (289)
Q Consensus 246 ~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~~ 287 (289)
+|||+||+|+++|.||++||++||+|+|.|+||||||+.+|.
T Consensus 62 ~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~G~ 103 (166)
T 2ayv_A 62 DSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINSQGA 103 (166)
T ss_dssp TSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCB
T ss_pred CCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCCCCe
Confidence 999999999999999999999999999999999999998653
No 24
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=99.89 E-value=3.3e-23 Score=166.89 Aligned_cols=125 Identities=20% Similarity=0.323 Sum_probs=105.5
Q ss_pred ChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceeccccccc
Q psy621 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTKT 83 (289)
Q Consensus 6 ~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~~ 83 (289)
++.+.+||+||+++|++++++|+.+.+ +++|+++|++.|.||++|+|+||.|++.+ +++||++||+|+|.++++|||
T Consensus 3 ~~~~~~RL~kE~~~l~~~~~~~i~~~~-~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 81 (155)
T 1jat_A 3 AASLPKRIIKETEKLVSDPVPGITAEP-HDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPN 81 (155)
T ss_dssp CCSCCHHHHHHHHHHHHSCCTTEEEEE-ETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred hHHHHHHHHHHHHHHHhCCCCCEEEEE-CCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCC
Confidence 345779999999999999999999997 56799999999999999999999886655 899999999999999999999
Q ss_pred eeccceeeCccccCccchHH---------HHHhhh-c-ccccccCC-----CchhhHHHHhHHh
Q psy621 84 FEASSFISAPLYTESWLRSF---------VSYVRR-N-QDFLNVTI-----DTREGFLKTLNDL 131 (289)
Q Consensus 84 ~e~~~~~~~~~~~~~Wl~~y---------~~~l~~-~-~~~~n~~~-----~~~~~F~~~l~~~ 131 (289)
+..+|.+|++++.+.|.+++ +++|.. + ++++|.++ ++.+.|.+.++++
T Consensus 82 v~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~r~~ 145 (155)
T 1jat_A 82 IDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDPLANDVAEDWIKNEQGAKAKAREW 145 (155)
T ss_dssp BCTTCCBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSTTCCTTHHHHHHCHHHHHHHHHHH
T ss_pred CCCCCEEEchhhccCCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHH
Confidence 99999999999999998874 333332 1 44555544 5778888888774
No 25
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=99.89 E-value=3.3e-23 Score=165.88 Aligned_cols=79 Identities=33% Similarity=0.655 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCCCCCC
Q psy621 171 KEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPDTLYQ 250 (289)
Q Consensus 171 ~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~t~y~ 250 (289)
+|+++|++++.++.+.++.+. +.++|+++|+++|.||++|||+
T Consensus 4 ~RL~kEl~~l~~~~~~~i~~~-------------------------------------~~~~~l~~w~~~i~Gp~~tpye 46 (149)
T 2r0j_A 4 RRITKETQNLANEPPPGIMAV-------------------------------------PVPENYRHFNILINGPDGTPYE 46 (149)
T ss_dssp HHHHHHHHHHHHSCCTTEEEE-------------------------------------EETTEEEEEEEEEECCTTSTTT
T ss_pred HHHHHHHHHHHhCCCCCEEEE-------------------------------------ECCCcccEEEEEEECCCCCCcC
Confidence 689999999998877777765 5678999999999999999999
Q ss_pred CCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 251 GGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 251 ~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
||.|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 47 gg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G 82 (149)
T 2r0j_A 47 GGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKLG 82 (149)
T ss_dssp TCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTC
T ss_pred CCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCCC
Confidence 999999999999999999999999999999999875
No 26
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=99.89 E-value=5.9e-23 Score=165.64 Aligned_cols=83 Identities=37% Similarity=0.815 Sum_probs=75.6
Q ss_pred chHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCC
Q psy621 167 GNMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPD 246 (289)
Q Consensus 167 ~~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~ 246 (289)
....+|+++|++++.++.+.++.+. +.++|+++|+++|.||++
T Consensus 8 ~~~~~RL~kEl~~l~~~~~~~i~~~-------------------------------------p~~~~l~~w~~~i~Gp~~ 50 (156)
T 2e2c_A 8 HSVSKRLQQELRTLLMSGDPGITAF-------------------------------------PDGDNLFKWVATLDGPKD 50 (156)
T ss_dssp CCHHHHHHHHHHHHHHHCCTTEEEE-------------------------------------ESSSCTTEEEEEEECCTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEE-------------------------------------ECCCCccEEEEEEECCCC
Confidence 3466899999999998877777765 567899999999999999
Q ss_pred CCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 247 TLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 247 t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
|||+||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 51 tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G 90 (156)
T 2e2c_A 51 TVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSG 90 (156)
T ss_dssp STTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTC
T ss_pred CCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCccCc
Confidence 9999999999999999999999999999999999999865
No 27
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=99.89 E-value=7.8e-23 Score=165.43 Aligned_cols=127 Identities=20% Similarity=0.325 Sum_probs=104.9
Q ss_pred CCChHHHHHHHHHHHHhhhC---CCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceecc
Q psy621 4 VPTSSALRALSMEYKSLQEE---PVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIE 78 (289)
Q Consensus 4 ~~~~~~~~Rl~kE~~~l~~~---~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~ 78 (289)
+|++.+.+||+||+++|+++ +++|+.+.+ .++|+++|++.|.||++|+|+||.|++.+ +++||++||+++|.++
T Consensus 4 ~Ms~~a~~RL~kEl~~l~~~~~~~~~~i~~~~-~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 82 (159)
T 2bep_A 4 AMANIAVQRIKREFKEVLKSEETSKNQIKVDL-VDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK 82 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEE-CSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred cchHHHHHHHHHHHHHHHhcCCCCCCCEEEEe-CCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCC
Confidence 57778999999999999985 688999997 56799999999999999999999986655 8999999999999999
Q ss_pred cccccee-ccceeeCccccCccchHH---------HHHhhhc--ccccccCC-----CchhhHHHHhHHh
Q psy621 79 NLTKTFE-ASSFISAPLYTESWLRSF---------VSYVRRN--QDFLNVTI-----DTREGFLKTLNDL 131 (289)
Q Consensus 79 ~~~~~~e-~~~~~~~~~~~~~Wl~~y---------~~~l~~~--~~~~n~~~-----~~~~~F~~~l~~~ 131 (289)
++|||+. .+|.+|++++.+.|.+++ +++|... ++++|..+ ++++.|.+.++++
T Consensus 83 i~HPni~~~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~a~~~ 152 (159)
T 2bep_A 83 IWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLW 152 (159)
T ss_dssp CCBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHH
T ss_pred CCccCCCCCCCEEeChhhhccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHH
Confidence 9999998 589999999999998875 3334321 33334332 5777788887773
No 28
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=99.89 E-value=8.5e-23 Score=166.16 Aligned_cols=83 Identities=36% Similarity=0.779 Sum_probs=74.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCCC
Q psy621 168 NMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPDT 247 (289)
Q Consensus 168 ~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~t 247 (289)
...+|+++|++++.++.+.++.+. |.+++|+++|+++|.||++|
T Consensus 3 ~a~~RL~kEl~~l~~~~~~gi~~~------------------------------------~~~~~nl~~w~~~I~Gp~~t 46 (164)
T 3h8k_A 3 TALKRLMAEYKQLTLNPPEGIVAG------------------------------------PMNEENFFEWEALIMGPEDT 46 (164)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEE------------------------------------ESSTTCTTEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEE------------------------------------ECCCCCccEEEEEEeCCCCC
Confidence 456899999999999877777764 13455999999999999999
Q ss_pred CCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 248 LYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 248 ~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
||+||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 47 pyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~~G 85 (164)
T 3h8k_A 47 CFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYPDG 85 (164)
T ss_dssp TTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTS
T ss_pred CCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCCCC
Confidence 999999999999999999999999999999999998755
No 29
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=99.89 E-value=3.8e-23 Score=168.42 Aligned_cols=100 Identities=20% Similarity=0.292 Sum_probs=91.9
Q ss_pred CCCChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceecccc
Q psy621 3 QVPTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENL 80 (289)
Q Consensus 3 ~~~~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~ 80 (289)
.+|++.+.+||+||+++|++++++|+.+.+ .++|+++|.+.|.||++|+|+||.|.+.| +++||++||+|+|.++++
T Consensus 18 ~~M~~~a~~RL~kEl~~l~~~~~~gi~~~p-~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~ 96 (169)
T 1yrv_A 18 GSMHGRAYLLLHRDFCDLKENNYKGITAKP-VSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPF 96 (169)
T ss_dssp TGGGCHHHHHHHHHHHHHHHHCCTTEEEEE-CSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCC
T ss_pred CccChHHHHHHHHHHHHHHhCCCCCEEEEE-cCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCc
Confidence 367788999999999999999999999987 66799999999999999999999986655 899999999999999999
Q ss_pred ccce-eccceeeCcccc--CccchHH
Q psy621 81 TKTF-EASSFISAPLYT--ESWLRSF 103 (289)
Q Consensus 81 ~~~~-e~~~~~~~~~~~--~~Wl~~y 103 (289)
|||+ ..+|.+|++++. +.|.+++
T Consensus 97 HPNI~~~~G~ICL~iL~~~~~WsP~~ 122 (169)
T 1yrv_A 97 HPNVDPHTGQPCIDFLDNPEKWNTNY 122 (169)
T ss_dssp CTTBCTTTCCBCCHHHHCGGGCCTTC
T ss_pred cCcccCCCCeEeehhhcCCcCCCCcC
Confidence 9999 799999999998 8998874
No 30
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=99.89 E-value=5.3e-23 Score=166.68 Aligned_cols=128 Identities=20% Similarity=0.301 Sum_probs=102.8
Q ss_pred CCChHHHHHHHHHHHHhhhCCCCCeEEEecCC-C---CceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceec
Q psy621 4 VPTSSALRALSMEYKSLQEEPVEGFRVKLVND-D---NLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQI 77 (289)
Q Consensus 4 ~~~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~-~---n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~ 77 (289)
..|.+|.+||+|||++|++++++|+.+.+..+ | |+++|++.|.||++|+|+||.|.+.+ +++||++||+++|.+
T Consensus 6 ~~~~~~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t 85 (163)
T 3rcz_B 6 HHSSLCKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTP 85 (163)
T ss_dssp ---CHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESS
T ss_pred CCcHHHHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeC
Confidence 45778999999999999999999999997543 2 89999999999999999999986665 799999999999999
Q ss_pred cccccceeccceeeCccccCc--cchHH---------HHHhhh-c-ccccccC-----CCchhhHHHHhHHh
Q psy621 78 ENLTKTFEASSFISAPLYTES--WLRSF---------VSYVRR-N-QDFLNVT-----IDTREGFLKTLNDL 131 (289)
Q Consensus 78 ~~~~~~~e~~~~~~~~~~~~~--Wl~~y---------~~~l~~-~-~~~~n~~-----~~~~~~F~~~l~~~ 131 (289)
+++|||+..+|.+|++++... |.+++ +.+|.. + ++++|.. .++.+.|.+.++++
T Consensus 86 ~i~HPnV~~~G~iCl~iL~~~~~W~p~~ti~~vL~~i~~ll~~P~~~~p~n~~aa~~~~~d~~~y~~~~r~~ 157 (163)
T 3rcz_B 86 PLFHPNVYPSGTVCLSILNEEEGWKPAITIKQILLGIQDLLDDPNIASPAQTEAYTMFKKDKVEYEKRVRAQ 157 (163)
T ss_dssp CCCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTSCSCHHHHHHHHHCHHHHHHHHHHH
T ss_pred CCccCCCCCCCcEeccccCCCCCcCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHH
Confidence 999999999999999998765 98874 333332 1 2333332 25677788877774
No 31
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=99.89 E-value=6.3e-23 Score=164.80 Aligned_cols=82 Identities=35% Similarity=0.844 Sum_probs=74.6
Q ss_pred hHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCCC
Q psy621 168 NMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPDT 247 (289)
Q Consensus 168 ~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~t 247 (289)
...+|+++|++++.++.+.++.+. +.++|+++|+++|.||++|
T Consensus 4 ~a~~RL~~E~~~l~~~~~~~i~~~-------------------------------------~~~~~l~~w~~~i~Gp~~t 46 (152)
T 2aak_A 4 PARKRLMRDFKRLQQDPPAGISGA-------------------------------------PQDNNIMLWNAVIFGPDDT 46 (152)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEE-------------------------------------EETTEEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEE-------------------------------------eCCCCccEEEEEEeCCCCC
Confidence 456899999999999876676664 5678999999999999999
Q ss_pred CCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 248 LYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 248 ~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
||+||.|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 47 pyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G 85 (152)
T 2aak_A 47 PWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYADG 85 (152)
T ss_dssp TTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTS
T ss_pred CccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCCCC
Confidence 999999999999999999999999999999999999854
No 32
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=99.89 E-value=4.7e-23 Score=166.99 Aligned_cols=85 Identities=29% Similarity=0.626 Sum_probs=75.0
Q ss_pred CCchHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCC-----CcceEEE
Q psy621 165 TDGNMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDD-----NLFEWEV 239 (289)
Q Consensus 165 ~~~~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~-----~~~~w~~ 239 (289)
.+....+|+++|++++.++.+.++++. +.++ |+++|++
T Consensus 7 ~~~~~~~RL~kEl~~l~~~~p~gi~~~-------------------------------------p~~~~d~~~nl~~W~~ 49 (163)
T 3rcz_B 7 HSSLCKTRLQEERKQWRRDHPFGFYAK-------------------------------------PCKSSDGGLDLMNWKV 49 (163)
T ss_dssp --CHHHHHHHHHHHHHHHSCCTTCEEE-------------------------------------EEECTTSSEEEEEEEE
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCEEEE-------------------------------------EccCcCCCCCccEEEE
Confidence 355677899999999999987777765 3333 9999999
Q ss_pred EEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 240 AIFGPPDTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 240 ~i~gp~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
+|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 50 ~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HPnV~~~G 96 (163)
T 3rcz_B 50 GIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHPNVYPSG 96 (163)
T ss_dssp EEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTS
T ss_pred EEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccCCCCCCC
Confidence 99999999999999999999999999999999999999999999655
No 33
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=99.89 E-value=4.7e-23 Score=166.31 Aligned_cols=127 Identities=20% Similarity=0.254 Sum_probs=102.6
Q ss_pred CChHHHHHHHHHHHHhhhCCCCCeEEEecCC----CCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceecc
Q psy621 5 PTSSALRALSMEYKSLQEEPVEGFRVKLVND----DNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIE 78 (289)
Q Consensus 5 ~~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~----~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~ 78 (289)
|++.+.+||+||+++|++++++|+.+.+..+ +|+++|++.|.||++|+|+||.|++.| +++||++||+++|.++
T Consensus 1 Ms~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~ 80 (157)
T 2gjd_A 1 MSSLCLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAG 80 (157)
T ss_dssp --CHHHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTT
T ss_pred CChHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCC
Confidence 4558899999999999999999999987532 489999999999999999999986655 8999999999999999
Q ss_pred ccccceeccceeeCccccC--ccchHH---------HHHhhh-c-ccccccC-----CCchhhHHHHhHHh
Q psy621 79 NLTKTFEASSFISAPLYTE--SWLRSF---------VSYVRR-N-QDFLNVT-----IDTREGFLKTLNDL 131 (289)
Q Consensus 79 ~~~~~~e~~~~~~~~~~~~--~Wl~~y---------~~~l~~-~-~~~~n~~-----~~~~~~F~~~l~~~ 131 (289)
++|||+..+|.+|++++.. .|.+++ +++|.. + ++++|.. .++.+.|.+.++++
T Consensus 81 i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~ 151 (157)
T 2gjd_A 81 FYHPNVYPSGTICLSILNEDQDWRPAITLKQIVLGVQDLLDSPNPNSPAQEPAWRSFSRNKAEYDKKVLLQ 151 (157)
T ss_dssp CCCTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHTSCCTTCCCCHHHHHHHHHCHHHHHHHHHHH
T ss_pred CccCCCCCCCcEeeecccCCCCCCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHH
Confidence 9999999999999999877 798874 333332 1 2333332 25677787777763
No 34
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=99.89 E-value=4.8e-23 Score=164.91 Aligned_cols=121 Identities=17% Similarity=0.290 Sum_probs=102.3
Q ss_pred HHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceeccccccceecc
Q psy621 10 LRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTKTFEAS 87 (289)
Q Consensus 10 ~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~~~e~~ 87 (289)
.+||+||+++|++++++|+.+.+ .++|+++|++.|.||++|+|+||.|++.+ +++||++||+++|.++++|||+..+
T Consensus 3 ~~RL~kEl~~l~~~~~~~i~~~~-~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 3 PRRITKETQNLANEPPPGIMAVP-VPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CHHHHHHHHHHHHSCCTTEEEEE-ETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEE-CCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 58999999999999999999997 56799999999999999999999986655 8999999999999999999999999
Q ss_pred ceeeCccccCccchHH---------HHHhhh-c-ccccccCC-----CchhhHHHHhHHh
Q psy621 88 SFISAPLYTESWLRSF---------VSYVRR-N-QDFLNVTI-----DTREGFLKTLNDL 131 (289)
Q Consensus 88 ~~~~~~~~~~~Wl~~y---------~~~l~~-~-~~~~n~~~-----~~~~~F~~~l~~~ 131 (289)
|.+|++++.+.|.+++ +++|.. + ++++|..+ ++++.|.+.++++
T Consensus 82 G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~ 141 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRTVLLSIQALLSSPEPDDPLDSKVAEHFKQDKNDAEHVARQW 141 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSSCHHHHHHHHCHHHHHHHHHHH
T ss_pred CEEechhcCCCCCCCCcHHHHHHHHHHHHhCCCCCCchhHHHHHHHHHCHHHHHHHHHHH
Confidence 9999999999998885 334432 1 34444432 5778888888774
No 35
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=99.89 E-value=5.2e-23 Score=168.88 Aligned_cols=128 Identities=21% Similarity=0.282 Sum_probs=106.3
Q ss_pred CChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceecccccc
Q psy621 5 PTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTK 82 (289)
Q Consensus 5 ~~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~ 82 (289)
|++.+.+||+|||++|++++++||.+.+ +++|+++|++.|.||++|+|+||.|++.| +++||++||+|+|.++++||
T Consensus 27 ~~~~~~~RL~kEl~~l~~~~~~gi~~~p-~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HP 105 (179)
T 1i7k_A 27 ARGPVGKRLQQELMTLMMSGDKGISAFP-ESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHP 105 (179)
T ss_dssp ---CHHHHHHHHHHHHHHHCCTTEEEEE-ETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCST
T ss_pred cChHHHHHHHHHHHHHHhCCCCCEEEEE-cCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccC
Confidence 4677899999999999999999999987 66799999999999999999999986655 89999999999999999999
Q ss_pred ceeccceeeCccccCccchHH---------HHHhhh-c-ccccc-----cCCCchhhHHHHhHHhhcc
Q psy621 83 TFEASSFISAPLYTESWLRSF---------VSYVRR-N-QDFLN-----VTIDTREGFLKTLNDLWLF 134 (289)
Q Consensus 83 ~~e~~~~~~~~~~~~~Wl~~y---------~~~l~~-~-~~~~n-----~~~~~~~~F~~~l~~~~~~ 134 (289)
|+..+|.+|++++.+.|.+++ +.+|.. + ++++| +. ++.+.|.+.+++....
T Consensus 106 NV~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~Pn~~~Pln~~aa~l~-~d~~~f~~~v~~~v~~ 172 (179)
T 1i7k_A 106 NVDTQGNISLDILKEKWSALYDVRTILLSIQSLLGEPNIDSPLNTHAAELW-KNPTAFKKYLQETYSK 172 (179)
T ss_dssp TBCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHT-TSHHHHHHHHHHHHHT
T ss_pred ccccCCeEEcccCcCcCCCCCCHHHHHHHHHHHHhCCCCcchhhHHHHHHh-hCHHHHHHHHHHHHHH
Confidence 999999999999999998885 333332 1 23333 34 7888899988886554
No 36
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=99.89 E-value=4.3e-23 Score=160.25 Aligned_cols=96 Identities=17% Similarity=0.205 Sum_probs=86.4
Q ss_pred hHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceeccc-cccc
Q psy621 7 SSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIEN-LTKT 83 (289)
Q Consensus 7 ~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~-~~~~ 83 (289)
++|.+||+||++++++++++|+.+.+ +++|+++|++.|.||++|+|+||.|++.+ +++||++||+++|.+++ +|||
T Consensus 5 ~~a~~RL~kEl~~l~~~~~~~~~~~~-~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPn 83 (125)
T 2fo3_A 5 GNANYRIQKELHNFLNNPPINCTLDV-HPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTH 83 (125)
T ss_dssp ----CHHHHHHHHHHHSCCTTEEEEE-CTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTT
T ss_pred hHHHHHHHHHHHHHHhCCCCCEEEEe-CcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCc
Confidence 35789999999999999999999986 77899999999999999999999986655 89999999999999996 9999
Q ss_pred eeccceeeCccccCccchHH
Q psy621 84 FEASSFISAPLYTESWLRSF 103 (289)
Q Consensus 84 ~e~~~~~~~~~~~~~Wl~~y 103 (289)
+..+|.+|++++.+.|.+++
T Consensus 84 v~~~G~iCl~iL~~~W~P~~ 103 (125)
T 2fo3_A 84 VYSNGDICLSLLGDDYNPSL 103 (125)
T ss_dssp BCTTSBBCCGGGTTTCCTTC
T ss_pred CCCCCEEEchhcCCCCCCCC
Confidence 99999999999999998885
No 37
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=99.89 E-value=9.2e-23 Score=166.13 Aligned_cols=82 Identities=24% Similarity=0.534 Sum_probs=74.2
Q ss_pred hHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCCC
Q psy621 168 NMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPDT 247 (289)
Q Consensus 168 ~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~t 247 (289)
...+|+++|++++.++.+.++.+. +.++|+++|+++|.||++|
T Consensus 23 ~a~~RL~kEl~~l~~~~~~gi~~~-------------------------------------p~~~nl~~W~~~I~GP~~T 65 (169)
T 1yrv_A 23 RAYLLLHRDFCDLKENNYKGITAK-------------------------------------PVSEDMMEWEVEIEGLQNS 65 (169)
T ss_dssp HHHHHHHHHHHHHHHHCCTTEEEE-------------------------------------ECSTTSCEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEE-------------------------------------EcCCccccceeEEECCCCC
Confidence 456899999999999877777665 5678999999999999999
Q ss_pred CCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCC-CCCC
Q psy621 248 LYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNV-YEGT 286 (289)
Q Consensus 248 ~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv-~~~~ 286 (289)
||+||+|+++|.||++||++||+|+|.|+|||||| +.+|
T Consensus 66 pYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G 105 (169)
T 1yrv_A 66 VWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTG 105 (169)
T ss_dssp TTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTTTC
T ss_pred CccceEEEEEEECCccCCCCCCcceecCCCccCcccCCCC
Confidence 99999999999999999999999999999999999 5444
No 38
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=99.89 E-value=8.1e-23 Score=166.02 Aligned_cols=85 Identities=35% Similarity=0.749 Sum_probs=76.2
Q ss_pred CchHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCC
Q psy621 166 DGNMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPP 245 (289)
Q Consensus 166 ~~~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~ 245 (289)
.....+|+++|++++.++.+.++.+. +.++|+++|+++|.||+
T Consensus 17 ~~~~~~RL~kEl~~l~~~~~~gi~~~-------------------------------------p~~~nl~~W~~~I~GP~ 59 (165)
T 2c4o_A 17 GSMALKRIHKELNDLARDPPAQCSAG-------------------------------------PVGDDMFHWQATIMGPN 59 (165)
T ss_dssp CHHHHHHHHHHHHHHHSSCCTTEEEE-------------------------------------ESSSCTTEEEEEEECCT
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEE-------------------------------------EcCCCcceeEEEEECCC
Confidence 34566899999999998877777665 56789999999999999
Q ss_pred CCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCCC
Q psy621 246 DTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGTA 287 (289)
Q Consensus 246 ~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~~ 287 (289)
+|||+||+|+++|.||++||++||+|+|.|+||||||+.+|.
T Consensus 60 ~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~~G~ 101 (165)
T 2c4o_A 60 DSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGS 101 (165)
T ss_dssp TSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCTTCB
T ss_pred CCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCCCCe
Confidence 999999999999999999999999999999999999998653
No 39
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=99.89 E-value=5.8e-23 Score=164.48 Aligned_cols=81 Identities=30% Similarity=0.720 Sum_probs=71.7
Q ss_pred HHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCC-CcceEEEEEeCCCCCC
Q psy621 170 EKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDD-NLFEWEVAIFGPPDTL 248 (289)
Q Consensus 170 ~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~-~~~~w~~~i~gp~~t~ 248 (289)
.+|+++|++++.++.+.++.+. +.++ |+++|+++|.||++||
T Consensus 3 ~~RL~~El~~l~~~~~~~i~~~-------------------------------------~~~~~~l~~w~~~I~Gp~~tp 45 (149)
T 1fxt_A 3 AKRIMKEIQAVKDDPAAHITLE-------------------------------------FVSESDIHHLKGTFLGPPGTP 45 (149)
T ss_dssp HHHHHHHHHHHHHCGGGCCEEE-------------------------------------ESSSSCSSEEEEEEECCSSST
T ss_pred HHHHHHHHHHHHhCCCCCEEEE-------------------------------------ECCCCCceEEEEEEECCCCCC
Confidence 4799999999998866555554 3444 9999999999999999
Q ss_pred CCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCCC
Q psy621 249 YQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGTA 287 (289)
Q Consensus 249 y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~~ 287 (289)
|+||+|+++|.||++||++||+|+|.|+||||||+..+|
T Consensus 46 yegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G 84 (149)
T 1fxt_A 46 YEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTG 84 (149)
T ss_dssp TCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCSSSC
T ss_pred cCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcCCCC
Confidence 999999999999999999999999999999999998444
No 40
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=99.89 E-value=6.5e-23 Score=168.33 Aligned_cols=85 Identities=35% Similarity=0.692 Sum_probs=75.7
Q ss_pred CchHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCC
Q psy621 166 DGNMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPP 245 (289)
Q Consensus 166 ~~~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~ 245 (289)
+....+|+++|++++.++...++.+. ++++|+++|+++|.||+
T Consensus 28 ~~~~~~RL~kEl~~l~~~~~~gi~~~-------------------------------------p~~~nl~~W~~~I~GP~ 70 (179)
T 1i7k_A 28 RGPVGKRLQQELMTLMMSGDKGISAF-------------------------------------PESDNLFKWVGTIHGAA 70 (179)
T ss_dssp --CHHHHHHHHHHHHHHHCCTTEEEE-------------------------------------EETTEEEEEEEEEEBCT
T ss_pred ChHHHHHHHHHHHHHHhCCCCCEEEE-------------------------------------EcCCcccccEEEEECCC
Confidence 34566899999999999877777665 56789999999999999
Q ss_pred CCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCCC
Q psy621 246 DTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGTA 287 (289)
Q Consensus 246 ~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~~ 287 (289)
+|||+||+|+++|.||++||++||+|+|.|+||||||+.+|.
T Consensus 71 ~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G~ 112 (179)
T 1i7k_A 71 GTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGN 112 (179)
T ss_dssp TSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCTTCB
T ss_pred CCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCccccCCe
Confidence 999999999999999999999999999999999999998653
No 41
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=99.88 E-value=1e-22 Score=171.71 Aligned_cols=85 Identities=40% Similarity=0.804 Sum_probs=76.7
Q ss_pred CchHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCC
Q psy621 166 DGNMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPP 245 (289)
Q Consensus 166 ~~~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~ 245 (289)
.....+|+++|++++.++.+.++.+. +.++|+++|+++|.||+
T Consensus 21 ~s~a~~RL~kEl~~l~~~~~~gi~~~-------------------------------------p~~~nl~~W~~~I~GP~ 63 (216)
T 2pwq_A 21 GSKELLRLQKELKDIENENVQEIDAH-------------------------------------IKDSNFFEWVGFIKGPE 63 (216)
T ss_dssp SCHHHHHHHHHHHHHHHSCTTTEEEE-------------------------------------ECSSCTTEEEEEEECCT
T ss_pred cCHHHHHHHHHHHHHHhCCCCCEEEE-------------------------------------EcCCccceeEEEEeCCC
Confidence 44567899999999999877777765 56789999999999999
Q ss_pred CCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCCC
Q psy621 246 DTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGTA 287 (289)
Q Consensus 246 ~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~~ 287 (289)
+|||+||+|+++|.||++||++||+|+|.|+||||||+..+|
T Consensus 64 ~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G 105 (216)
T 2pwq_A 64 GTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQTG 105 (216)
T ss_dssp TSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTC
T ss_pred CCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCCCC
Confidence 999999999999999999999999999999999999996555
No 42
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=99.88 E-value=7.9e-23 Score=160.94 Aligned_cols=97 Identities=15% Similarity=0.187 Sum_probs=89.7
Q ss_pred ChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceeccc-ccc
Q psy621 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIEN-LTK 82 (289)
Q Consensus 6 ~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~-~~~ 82 (289)
.+.+.+||+||+++|++++++|+.+.+ +++|+++|++.|.||++|+|+||.|++.+ +++||++||+++|.+++ +||
T Consensus 18 ~~~~~~RL~kEl~~l~~~~~~~~~~~~-~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HP 96 (136)
T 2h2y_A 18 LGNANYRIQKELNNFLKNPPINCTIDV-HPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHT 96 (136)
T ss_dssp TTSHHHHHHHHHHHHHHSCCTTEEEEE-CTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCT
T ss_pred chHHHHHHHHHHHHHHhCCCCCeEEEe-ccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCC
Confidence 446889999999999999999999986 67899999999999999999999986655 89999999999999996 999
Q ss_pred ceeccceeeCccccCccchHH
Q psy621 83 TFEASSFISAPLYTESWLRSF 103 (289)
Q Consensus 83 ~~e~~~~~~~~~~~~~Wl~~y 103 (289)
|+..+|.+|++++.+.|.+++
T Consensus 97 nv~~~G~ICl~iL~~~WsP~~ 117 (136)
T 2h2y_A 97 HVYSNGDICLSVLGDDYNPSL 117 (136)
T ss_dssp TBCTTCCBCCGGGTTTCCTTC
T ss_pred cCCCCCEEECccccCCCCCCC
Confidence 999999999999999999885
No 43
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=99.88 E-value=2.6e-23 Score=166.55 Aligned_cols=123 Identities=19% Similarity=0.358 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceeccccccceec
Q psy621 9 ALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTKTFEA 86 (289)
Q Consensus 9 ~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~~~e~ 86 (289)
+.+||+||+++|++++++|+.+.+.+++|+++|++.|.||++|+|+||.|++.+ +++||++||+++|.++++|||+..
T Consensus 2 ~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~ 81 (149)
T 1fxt_A 2 RAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISS 81 (149)
T ss_dssp CHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBCS
T ss_pred hHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCcC
Confidence 569999999999999999999998655599999999999999999999986655 899999999999999999999998
Q ss_pred -cceeeCccccCccchHH---------HHHhhh-c-ccccccCC-----CchhhHHHHhHHh
Q psy621 87 -SSFISAPLYTESWLRSF---------VSYVRR-N-QDFLNVTI-----DTREGFLKTLNDL 131 (289)
Q Consensus 87 -~~~~~~~~~~~~Wl~~y---------~~~l~~-~-~~~~n~~~-----~~~~~F~~~l~~~ 131 (289)
+|.+|++++.+.|.+++ +++|.. + ++++|.++ ++++.|.+.++++
T Consensus 82 ~~G~iCl~iL~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~d~~~f~~~a~~~ 143 (149)
T 1fxt_A 82 VTGAICLDILKNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALW 143 (149)
T ss_dssp SSCCBCCHHHHTSCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCSSHHHHHHHHH
T ss_pred CCCeEeCCcCCCCCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHH
Confidence 99999999999998884 333332 1 23333322 4667787777763
No 44
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=99.88 E-value=1.3e-22 Score=165.26 Aligned_cols=83 Identities=37% Similarity=0.799 Sum_probs=74.3
Q ss_pred hHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCCC
Q psy621 168 NMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPDT 247 (289)
Q Consensus 168 ~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~t 247 (289)
...+|+++|++++.++...++.+. |.+++|+++|+++|.||++|
T Consensus 4 ~a~~RL~kEl~~l~~~~~~gi~~~------------------------------------~~~~~~l~~w~~~i~GP~~t 47 (165)
T 2ucz_A 4 TAQKRLLKELQQLIKDSPPGIVAG------------------------------------PKSENNIFIWDCLIQGPPDT 47 (165)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEE------------------------------------ESSSSCCSEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEE------------------------------------ECCCCCccEEEEEEECCCCC
Confidence 456899999999988876677664 13557999999999999999
Q ss_pred CCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 248 LYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 248 ~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
||+||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 48 pYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~G 86 (165)
T 2ucz_A 48 PYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYPNG 86 (165)
T ss_dssp TTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCTTS
T ss_pred CccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCCCC
Confidence 999999999999999999999999999999999999865
No 45
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=99.88 E-value=8.2e-23 Score=165.57 Aligned_cols=128 Identities=21% Similarity=0.297 Sum_probs=104.5
Q ss_pred CCChHHHHHHHHHHHHhhhCCCCCeEEEecC----CCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceec
Q psy621 4 VPTSSALRALSMEYKSLQEEPVEGFRVKLVN----DDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQI 77 (289)
Q Consensus 4 ~~~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~----~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~ 77 (289)
+|++.+.+||+||+++|++++++|+.+.+.. ++|+++|++.|.||++|+|+||.|++.+ +++||++||+++|.+
T Consensus 3 ~M~~~a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t 82 (161)
T 2grr_A 3 HMSGIALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEP 82 (161)
T ss_dssp -CCHHHHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESS
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEec
Confidence 5778899999999999999999999998653 3689999999999999999999986655 899999999999999
Q ss_pred cccccceeccceeeCccccC--ccchHH---------HHHhhh-c-ccccccC-----CCchhhHHHHhHHh
Q psy621 78 ENLTKTFEASSFISAPLYTE--SWLRSF---------VSYVRR-N-QDFLNVT-----IDTREGFLKTLNDL 131 (289)
Q Consensus 78 ~~~~~~~e~~~~~~~~~~~~--~Wl~~y---------~~~l~~-~-~~~~n~~-----~~~~~~F~~~l~~~ 131 (289)
+++|||+..+|.+|++++.. .|.+++ +++|.. + ++++|.. .++.+.|.+.++++
T Consensus 83 ~i~HPnv~~~G~iCl~iL~~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~~~~ 154 (161)
T 2grr_A 83 PLFHPNVYPSGTVCLSILEEDKDWRPAITIKQILLGIQELLNEPNIQSPAQAEAYTIYCQNRVEYEKRVRAQ 154 (161)
T ss_dssp CCCSTTBCTTSBBCCGGGCTTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHH
T ss_pred CcccCCCCCCCeEeehhcCCCCCcCCCCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHH
Confidence 99999999999999999875 798774 333332 1 3333332 25677788887774
No 46
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=99.88 E-value=1.5e-22 Score=165.61 Aligned_cols=86 Identities=42% Similarity=0.870 Sum_probs=76.2
Q ss_pred CCchHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCC
Q psy621 165 TDGNMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGP 244 (289)
Q Consensus 165 ~~~~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp 244 (289)
.+....+++++|++++.++.+.++.+. |.+++|+++|+++|.||
T Consensus 14 ~~~~~~~rL~kEl~~l~~~~~~gi~~~------------------------------------p~~~~nl~~W~~~I~GP 57 (172)
T 2awf_A 14 LVPRGSLLLRRQLAELNKNPVEGFSAG------------------------------------LIDDNDLYRWEVLIIGP 57 (172)
T ss_dssp CCCTTHHHHHHHHHHHHHSCCTTEEEE------------------------------------ESSTTCTTEEEEEEECC
T ss_pred ChHHHHHHHHHHHHHHHhCCCCCEEEE------------------------------------ECCCccccccEEEEeCC
Confidence 345667899999999998876677664 13557999999999999
Q ss_pred CCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 245 PDTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 245 ~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
++|||+||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 58 ~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~~~G 99 (172)
T 2awf_A 58 PDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNG 99 (172)
T ss_dssp TTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTTC
T ss_pred CCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCCCCC
Confidence 999999999999999999999999999999999999999875
No 47
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=99.88 E-value=1.5e-22 Score=167.32 Aligned_cols=85 Identities=55% Similarity=1.127 Sum_probs=76.5
Q ss_pred CchHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCC
Q psy621 166 DGNMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPP 245 (289)
Q Consensus 166 ~~~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~ 245 (289)
+....+|+++|++++.++.+.++++. +++++|+++|+++|.||+
T Consensus 5 ~~~a~kRL~kEl~~l~~~~~~gi~~~------------------------------------~~~~~nl~~W~~~I~Gp~ 48 (183)
T 3rz3_A 5 SPSSQKALLLELKGLQEEPVEGFRVT------------------------------------LVDEGDLYNWEVAIFGPP 48 (183)
T ss_dssp CCHHHHHHHHHHHHHHHSCCTTEEEE------------------------------------ECTTCCTTEEEEEEECCT
T ss_pred chHHHHHHHHHHHHHHhCCCCCEEEE------------------------------------ecCccchhheeeeeeCCC
Confidence 45677899999999999877676654 157789999999999999
Q ss_pred CCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 246 DTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 246 ~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
+|||+||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 49 ~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G 89 (183)
T 3rz3_A 49 NTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYETG 89 (183)
T ss_dssp TSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCTTS
T ss_pred CCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCCCC
Confidence 99999999999999999999999999999999999999854
No 48
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=99.88 E-value=9.3e-23 Score=160.18 Aligned_cols=81 Identities=28% Similarity=0.586 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCCCCCC
Q psy621 171 KEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPDTLYQ 250 (289)
Q Consensus 171 ~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~t~y~ 250 (289)
+|+++|++++.++.+.++.+.- .++++|+++|+++|.||++|||+
T Consensus 25 ~RL~kEl~~l~~~~~~gi~v~~-----------------------------------~~~~~nl~~W~~~I~GP~~TpYe 69 (136)
T 2a7l_A 25 KRLQKELLALQNDPPPGMTLNE-----------------------------------KSVQNSITQWIVDMEGAPGTLYE 69 (136)
T ss_dssp HHHHHHHHHHHHSCCTTCCCCT-----------------------------------TCCCCSCEEEEEEEECCTTSTTT
T ss_pred HHHHHHHHHHHhCCCCCEEEEE-----------------------------------eeCccccceeEEEEECCCCCccc
Confidence 7999999999988665554310 15678999999999999999999
Q ss_pred CCEEEEEEEcCCCCCCCCCeEEEecCCc--CCCCCCCC
Q psy621 251 GGYFKAHMKFPIDYPYSPPTIRFLTKVW--HPNVYEGT 286 (289)
Q Consensus 251 ~g~~~~~i~~~~~yP~~pP~v~f~t~i~--hpnv~~~~ 286 (289)
||.|+++|.||++||++||+|+|.|++| ||||+.+|
T Consensus 70 gG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV~~~G 107 (136)
T 2a7l_A 70 GEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHVYSNG 107 (136)
T ss_dssp TCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTBCTTC
T ss_pred cEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccCCCCC
Confidence 9999999999999999999999999999 99999865
No 49
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=99.88 E-value=8.6e-23 Score=164.48 Aligned_cols=81 Identities=33% Similarity=0.657 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCCCC
Q psy621 169 MEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPDTL 248 (289)
Q Consensus 169 ~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~t~ 248 (289)
..+|+++|++++.++.+.++.+. +.++|+++|+++|.||++||
T Consensus 6 ~~~RL~kE~~~l~~~~~~~i~~~-------------------------------------~~~~~l~~w~~~I~Gp~~tp 48 (155)
T 1jat_A 6 LPKRIIKETEKLVSDPVPGITAE-------------------------------------PHDDNLRYFQVTIEGPEQSP 48 (155)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEE-------------------------------------EETTEEEEEEEEEECCTTST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEE-------------------------------------ECCCchhEEEEEEECCCCCC
Confidence 34799999999998877677665 56789999999999999999
Q ss_pred CCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 249 YQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 249 y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
|+||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 49 yegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G 86 (155)
T 1jat_A 49 YEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDRLG 86 (155)
T ss_dssp TTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTC
T ss_pred ccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCCCC
Confidence 99999999999999999999999999999999999655
No 50
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=99.88 E-value=1e-22 Score=171.71 Aligned_cols=129 Identities=22% Similarity=0.329 Sum_probs=107.3
Q ss_pred CCChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceeccccc
Q psy621 4 VPTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLT 81 (289)
Q Consensus 4 ~~~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~ 81 (289)
.+++.+.+||+||+++|++++++|+.+.+ .++|+++|.+.|.||++|+|+||.|.+.| +++||++||+++|.++++|
T Consensus 19 ~~~s~a~~RL~kEl~~l~~~~~~gi~~~p-~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~H 97 (216)
T 2pwq_A 19 FQGSKELLRLQKELKDIENENVQEIDAHI-KDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWH 97 (216)
T ss_dssp CCSCHHHHHHHHHHHHHHHSCTTTEEEEE-CSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCB
T ss_pred cccCHHHHHHHHHHHHHHhCCCCCEEEEE-cCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcC
Confidence 45678999999999999999999999997 56799999999999999999999986655 8999999999999999999
Q ss_pred ccee-ccceeeCccccCccchHH---------HHHhhhc--ccccccC-----CCchhhHHHHhHHhhc
Q psy621 82 KTFE-ASSFISAPLYTESWLRSF---------VSYVRRN--QDFLNVT-----IDTREGFLKTLNDLWL 133 (289)
Q Consensus 82 ~~~e-~~~~~~~~~~~~~Wl~~y---------~~~l~~~--~~~~n~~-----~~~~~~F~~~l~~~~~ 133 (289)
||+. .+|.+|++++.+.|.+++ +++|... ++++|.. .++.+.|.+.++++-.
T Consensus 98 PNI~~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~dPln~eaa~~~~~d~~~f~~~ar~~t~ 166 (216)
T 2pwq_A 98 PNISSQTGAICLDVLKNEWSPALTIRTALLSIQALLSDPQPDDPQDAEVAKMYKENHALFVKTASVWTK 166 (216)
T ss_dssp TTBCTTTCBBCCHHHHHHCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCCcCCCCEEEchhhcccCCCCCcHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHHH
Confidence 9998 589999999988998884 3344321 3344432 2577889998888443
No 51
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=99.88 E-value=1.6e-22 Score=167.14 Aligned_cols=100 Identities=39% Similarity=0.683 Sum_probs=90.5
Q ss_pred CCChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceeccccc
Q psy621 4 VPTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLT 81 (289)
Q Consensus 4 ~~~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~ 81 (289)
++++++.|||+|||++|++++++|+.+.+.+++|+++|++.|.||++|+|+||.|++.| +++||++||+++|.++++|
T Consensus 3 m~~~~a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~H 82 (183)
T 3rz3_A 3 MGSPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWH 82 (183)
T ss_dssp --CCHHHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCC
T ss_pred CcchHHHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCcc
Confidence 34678999999999999999999999997688899999999999999999999986655 8999999999999999999
Q ss_pred cceeccceeeCcccc-------------CccchHH
Q psy621 82 KTFEASSFISAPLYT-------------ESWLRSF 103 (289)
Q Consensus 82 ~~~e~~~~~~~~~~~-------------~~Wl~~y 103 (289)
||+..+|.+|++++. +.|.+++
T Consensus 83 PnV~~~G~iClsiL~~~~~~~~~~~~~~~~W~p~~ 117 (183)
T 3rz3_A 83 PNIYETGDVCISILHPPVDDPQSGELPSERWNPTQ 117 (183)
T ss_dssp TTBCTTSBBCCTTC--------------CCCCTTC
T ss_pred CCCCCCCcEehhhcCcccccccccccccCCCCCcC
Confidence 999999999999985 7898875
No 52
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=99.88 E-value=5e-23 Score=161.69 Aligned_cols=94 Identities=24% Similarity=0.444 Sum_probs=86.1
Q ss_pred HHHHHHHHHHhhhCCCCCeEEE-ecCCCCceEEEEEEeCCCCCCccCcEEEEE--EcCCCCCCCcccceecccc--ccce
Q psy621 10 LRALSMEYKSLQEEPVEGFRVK-LVNDDNLFEWEVAIFGPPDTLYQGGYFKAI--IEGELPHWDVNVQNQIENL--TKTF 84 (289)
Q Consensus 10 ~~Rl~kE~~~l~~~~~~g~~~~-~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~--v~~~yp~~~P~v~~~~~~~--~~~~ 84 (289)
.+||+||+++|++++++|+.+. ..+++|+++|++.|.||++|+|+||.|.+. ++++||++||+++|.++++ |||+
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV 103 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHV 103 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTB
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccC
Confidence 3999999999999999999864 136789999999999999999999988655 5899999999999999998 9999
Q ss_pred eccceeeCccccCccchHH
Q psy621 85 EASSFISAPLYTESWLRSF 103 (289)
Q Consensus 85 e~~~~~~~~~~~~~Wl~~y 103 (289)
..+|.+|++++.+.|.+++
T Consensus 104 ~~~G~ICL~iL~~~WsP~~ 122 (136)
T 2a7l_A 104 YSNGHICLSILTEDWSPAL 122 (136)
T ss_dssp CTTCBBCCGGGTTTCCTTS
T ss_pred CCCCeEEchhcCCCCCCCC
Confidence 9999999999999999886
No 53
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=99.88 E-value=2.9e-22 Score=166.48 Aligned_cols=124 Identities=21% Similarity=0.391 Sum_probs=104.1
Q ss_pred hHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceeccccccce
Q psy621 7 SSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTKTF 84 (289)
Q Consensus 7 ~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~~~ 84 (289)
+.+.+||+|||++|++++++|+.+.+ .++|+++|++.|.||++|+|+||.|.+.| +++||+.||+|+|.++++|||+
T Consensus 47 s~a~~RL~kEl~~l~~~~~~gi~~~p-~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 125 (194)
T 3bzh_A 47 STSAKRIQKELADITLDPPPNCSAGP-KGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNI 125 (194)
T ss_dssp HHHHHHHHHHHHHHHHSCCTTEEEEE-SSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTB
T ss_pred cHHHHHHHHHHHHHHhCCCCCceeec-ccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceE
Confidence 55889999999999999999999996 67799999999999999999999986655 8999999999999999999999
Q ss_pred eccceeeCccccCccchHH---------HHHhhh-c-ccccccC-----CCchhhHHHHhHHh
Q psy621 85 EASSFISAPLYTESWLRSF---------VSYVRR-N-QDFLNVT-----IDTREGFLKTLNDL 131 (289)
Q Consensus 85 e~~~~~~~~~~~~~Wl~~y---------~~~l~~-~-~~~~n~~-----~~~~~~F~~~l~~~ 131 (289)
..+|.+|++++.+.|.+++ +.+|.. + ++++|.. .++++.|.+.++++
T Consensus 126 ~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~~aa~l~~~d~~~f~~~ar~~ 188 (194)
T 3bzh_A 126 NSQGVICLDILKDNWSPALTISKVLLSICSLLTDCNPADPLVGSIATQYMTNRAEHDRMARQW 188 (194)
T ss_dssp CTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHH
T ss_pred CCCCceechhhhccCCCcCcHHHHHHHHHHHHhCCCCccchhHHHHHHHHHCHHHHHHHHHHH
Confidence 9999999999999998874 333332 1 3344432 25777788887774
No 54
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=99.88 E-value=2.6e-22 Score=162.33 Aligned_cols=83 Identities=36% Similarity=0.749 Sum_probs=72.8
Q ss_pred hHHHHHHHHHHHHHHh---CCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCC
Q psy621 168 NMEKEMVKELRRIAHE---SSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGP 244 (289)
Q Consensus 168 ~~~~~~~~~~r~ia~~---~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp 244 (289)
...+|+++|++++.+. ...++.+. +.++|+++|+++|.||
T Consensus 8 ~a~~RL~kEl~~l~~~~~~~~~~i~~~-------------------------------------~~~~~l~~w~~~i~Gp 50 (159)
T 2bep_A 8 IAVQRIKREFKEVLKSEETSKNQIKVD-------------------------------------LVDENFTELRGEIAGP 50 (159)
T ss_dssp HHHHHHHHHHHHHHHCHHHHTTSEEEE-------------------------------------ECSSSSSEEEEEEECC
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCEEEE-------------------------------------eCCCchheEEEEEECC
Confidence 4568999999999874 34455554 5677999999999999
Q ss_pred CCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCCC
Q psy621 245 PDTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGTA 287 (289)
Q Consensus 245 ~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~~ 287 (289)
++|||+||+|+++|.||++||++||+|+|.|+||||||+..+|
T Consensus 51 ~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~~~~G 93 (159)
T 2bep_A 51 PDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTG 93 (159)
T ss_dssp TTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTC
T ss_pred CCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCCCCCCC
Confidence 9999999999999999999999999999999999999997555
No 55
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.88 E-value=1.6e-22 Score=167.90 Aligned_cols=59 Identities=41% Similarity=0.930 Sum_probs=55.5
Q ss_pred cCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCCC
Q psy621 229 VNDDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGTA 287 (289)
Q Consensus 229 ~~~~~~~~w~~~i~gp~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~~ 287 (289)
+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+..+|
T Consensus 69 ~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~~G 127 (193)
T 2f4z_A 69 IVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKMKFVTKIWHPNISSQTG 127 (193)
T ss_dssp EETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTC
T ss_pred EcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeEEEecCCccCCCcCCCC
Confidence 45689999999999999999999999999999999999999999999999999996555
No 56
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=99.88 E-value=2.6e-22 Score=166.82 Aligned_cols=82 Identities=34% Similarity=0.730 Sum_probs=74.7
Q ss_pred hHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCCC
Q psy621 168 NMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPDT 247 (289)
Q Consensus 168 ~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~t 247 (289)
...+|+++|++++.++.+.++.+. +.++|+++|+++|.||++|
T Consensus 48 ~a~~RL~kEl~~l~~~~~~gi~~~-------------------------------------p~~~nl~~W~~~I~GP~~T 90 (194)
T 3bzh_A 48 TSAKRIQKELADITLDPPPNCSAG-------------------------------------PKGDNIYEWRSTILGPPGS 90 (194)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEE-------------------------------------ESSSCTTEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHhCCCCCceee-------------------------------------cccCccccceEEEeCCCCC
Confidence 456799999999998876677664 5778999999999999999
Q ss_pred CCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 248 LYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 248 ~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
||+||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 91 pYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~G 129 (194)
T 3bzh_A 91 VYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQG 129 (194)
T ss_dssp TTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTC
T ss_pred CccCCEEEEEEECCCcCCCCCccccccCCCccceECCCC
Confidence 999999999999999999999999999999999999865
No 57
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=99.88 E-value=3.4e-22 Score=160.87 Aligned_cols=85 Identities=27% Similarity=0.454 Sum_probs=72.2
Q ss_pred chHHHHHHHHHHHHHHhCCCC-eEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCC--cceEEEEEeC
Q psy621 167 GNMEKEMVKELRRIAHESSLN-VSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDN--LFEWEVAIFG 243 (289)
Q Consensus 167 ~~~~~~~~~~~r~ia~~~~~~-~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~--~~~w~~~i~g 243 (289)
..+.+|+++|++++.++.+.+ +.+. +++++| +++|+++|.|
T Consensus 24 ~p~~~RL~kEl~~l~~~~~~g~~~~~------------------------------------~~~~~d~~l~~W~~~I~G 67 (160)
T 2a4d_A 24 VPRNFRLLEELEEGQKGVGDGTVSWG------------------------------------LEDDEDMTLTRWTGMIIG 67 (160)
T ss_dssp HHHHHHHHHHHHHHHSCCTTSSEEEE------------------------------------ESSTTCTTCCEEEEEEEC
T ss_pred chHHHHHHHHHHHHHhCCCCCcEEEE------------------------------------ecCCccccceeeEEEEEC
Confidence 446689999999998876544 3333 135554 9999999999
Q ss_pred CCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCCC
Q psy621 244 PPDTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGTA 287 (289)
Q Consensus 244 p~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~~ 287 (289)
|++|||+||+|+++|.||++||++||+|+|.|+||||||+..+|
T Consensus 68 P~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G 111 (160)
T 2a4d_A 68 PPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNG 111 (160)
T ss_dssp CTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTTC
T ss_pred CCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCCEECCCC
Confidence 99999999999999999999999999999999999999995444
No 58
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=99.87 E-value=3.6e-22 Score=160.41 Aligned_cols=85 Identities=28% Similarity=0.361 Sum_probs=73.0
Q ss_pred CchHHHHHHHHHHHHHHh-CCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccC--CCCcceEEEEEe
Q psy621 166 DGNMEKEMVKELRRIAHE-SSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVN--DDNLFEWEVAIF 242 (289)
Q Consensus 166 ~~~~~~~~~~~~r~ia~~-~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~--~~~~~~w~~~i~ 242 (289)
...+.+|+++|++++.++ .+.++.+.- .+ +.|+++|+++|.
T Consensus 19 ~~~~~~RL~kEl~~l~~~~~~~~i~~~~------------------------------------~~~~d~nl~~W~~~I~ 62 (156)
T 2q0v_A 19 IVPRSFRLLDELERGQKGNVSEGVSFGL------------------------------------ESADDITLSNWSCTIF 62 (156)
T ss_dssp CCCHHHHHHHHHHHHHCC-CCTTEEEEE------------------------------------SSTTCTTCCEEEEEEE
T ss_pred cchHHHHHHHHHHHHHhCCCCCCeEEEE------------------------------------CCCccccceeeEEEEE
Confidence 345568999999999887 455665541 23 236999999999
Q ss_pred CCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 243 GPPDTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 243 gp~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
||++|||+||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 63 GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G 106 (156)
T 2q0v_A 63 GQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSCVDNCG 106 (156)
T ss_dssp CCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTTBCTTS
T ss_pred CCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCCCccCC
Confidence 99999999999999999999999999999999999999999875
No 59
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=99.87 E-value=2.1e-22 Score=167.13 Aligned_cols=125 Identities=18% Similarity=0.264 Sum_probs=99.7
Q ss_pred ChHHHHHHHHHHHHhhhCCC-------------CCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCC
Q psy621 6 TSSALRALSMEYKSLQEEPV-------------EGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWD 70 (289)
Q Consensus 6 ~~~~~~Rl~kE~~~l~~~~~-------------~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~ 70 (289)
+..+.+||+|||++|+++++ +|+.+.+ .++|+++|++.|.||++|+|+||.|.+.| +++||++|
T Consensus 30 ~~~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~-~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~P 108 (193)
T 2f4z_A 30 TPREQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQI-VGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNP 108 (193)
T ss_dssp --CHHHHHHHHHHHHHHC----------------CEEEEE-ETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSC
T ss_pred CCHHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEE-cCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCC
Confidence 34578999999999999887 7999997 55799999999999999999999986655 89999999
Q ss_pred cccceecccccccee-ccceeeCccccCccchHH---------HHHhhhc--ccccccC-----CCchhhHHHHhHHh
Q psy621 71 VNVQNQIENLTKTFE-ASSFISAPLYTESWLRSF---------VSYVRRN--QDFLNVT-----IDTREGFLKTLNDL 131 (289)
Q Consensus 71 P~v~~~~~~~~~~~e-~~~~~~~~~~~~~Wl~~y---------~~~l~~~--~~~~n~~-----~~~~~~F~~~l~~~ 131 (289)
|+|+|.++++|||+. .+|.+|++++.+.|.+++ +.+|... ++++|.. .++++.|.+.++++
T Consensus 109 P~V~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~sll~~pnp~~P~n~~aa~l~~~d~~~f~~~ar~~ 186 (193)
T 2f4z_A 109 PKMKFVTKIWHPNISSQTGAICLDILKHEWSPALTIRTALLSIQAMLADPVPTDPQDAEVAKMMIENHPLFVQTAKLW 186 (193)
T ss_dssp CEEEESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHH
T ss_pred CeEEEecCCccCCCcCCCCEEECccccccCCCCCCHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHH
Confidence 999999999999998 589999999999998885 3333321 3344433 25777888888774
No 60
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=99.87 E-value=2.3e-22 Score=162.28 Aligned_cols=88 Identities=24% Similarity=0.491 Sum_probs=73.4
Q ss_pred hHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCCC
Q psy621 168 NMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPDT 247 (289)
Q Consensus 168 ~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~t 247 (289)
...+|+++|++++.++.+.++.+.... .+..++|+++|+++|.||++|
T Consensus 4 ~a~~RL~kE~~~l~~~~~~g~~~~p~~--------------------------------~~~~~~nl~~w~~~I~Gp~~t 51 (157)
T 2gjd_A 4 LCLQRLQEERKKWRKDHPFGFYAKPVK--------------------------------KADGSMDLQKWEAGIPGKEGT 51 (157)
T ss_dssp HHHHHHHHHHHHHHHCCCTTCEEEEEE--------------------------------CTTSCEEEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEecc--------------------------------ccCCCCcccEEEEEEECCCCC
Confidence 456799999999999877666664100 000124899999999999999
Q ss_pred CCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCCC
Q psy621 248 LYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGTA 287 (289)
Q Consensus 248 ~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~~ 287 (289)
||+||+|+++|.||++||++||+|+|.|+||||||+.+|.
T Consensus 52 pyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~ 91 (157)
T 2gjd_A 52 NWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHPNVYPSGT 91 (157)
T ss_dssp TTTTBEEEEEEECCTTTTTSCCEEECCTTCCCTTBCTTSB
T ss_pred CcCCeEEEEEEEcCCCCCCCCCeeeccCCCccCCCCCCCc
Confidence 9999999999999999999999999999999999997653
No 61
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=99.87 E-value=5.4e-22 Score=162.30 Aligned_cols=129 Identities=18% Similarity=0.273 Sum_probs=102.9
Q ss_pred CCChHHHHHHHHHHHHhhh-C-C------CC---CeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCC
Q psy621 4 VPTSSALRALSMEYKSLQE-E-P------VE---GFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWD 70 (289)
Q Consensus 4 ~~~~~~~~Rl~kE~~~l~~-~-~------~~---g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~ 70 (289)
+|++.+.+||+|||++|++ + + +. ++.+.+++++|+++|++.|.||++|+|+||.|++.+ +++||++|
T Consensus 2 ~Ms~~~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~P 81 (172)
T 2y9m_A 2 AMADTCMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNP 81 (172)
T ss_dssp --CHHHHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSC
T ss_pred CCcHHHHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCC
Confidence 4778999999999999998 5 3 33 456666578899999999999999999999886655 89999999
Q ss_pred cccceec-ccccccee-ccceeeCcccc-CccchHH---------HHHhhh-c-ccccccC-----CC-chhhHHHHhHH
Q psy621 71 VNVQNQI-ENLTKTFE-ASSFISAPLYT-ESWLRSF---------VSYVRR-N-QDFLNVT-----ID-TREGFLKTLND 130 (289)
Q Consensus 71 P~v~~~~-~~~~~~~e-~~~~~~~~~~~-~~Wl~~y---------~~~l~~-~-~~~~n~~-----~~-~~~~F~~~l~~ 130 (289)
|+++|.+ +++|||+. .+|.+|++++. +.|.+++ +++|.. + ++++|.+ .+ +.+.|.+.+++
T Consensus 82 P~v~f~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~vL~si~~ll~~p~~~~p~n~~aa~~~~~~d~~~f~~~~~~ 161 (172)
T 2y9m_A 82 PKISFMQNNILHCNVKSATGEICLNILKPEEWTPVWDLLHCVHAVWRLLREPVCDSPLDVDIGNIIRCGDMSAYQGIVKY 161 (172)
T ss_dssp CEEEECTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHTTTCHHHHHHHHHH
T ss_pred CEEEEeeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999 99999995 78999999998 8998874 333332 1 3444433 25 78889888887
Q ss_pred hh
Q psy621 131 LW 132 (289)
Q Consensus 131 ~~ 132 (289)
+-
T Consensus 162 ~~ 163 (172)
T 2y9m_A 162 FL 163 (172)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 62
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=99.87 E-value=2.7e-22 Score=168.27 Aligned_cols=127 Identities=20% Similarity=0.302 Sum_probs=104.1
Q ss_pred CChHHHHHHHHHHHHhhhC---CCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceeccc
Q psy621 5 PTSSALRALSMEYKSLQEE---PVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIEN 79 (289)
Q Consensus 5 ~~~~~~~Rl~kE~~~l~~~---~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~ 79 (289)
|++.|.+||+|||++|+++ ++.|+.+.+ .++|+++|++.|.||++|+|+||.|++.| +.+||++||+++|.+++
T Consensus 2 Ms~~a~~Rl~kEl~~l~~~~~~~~~~i~~~~-~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i 80 (201)
T 3k9o_A 2 MANIAVQRIKREFKEVLKSEETSKNQIKVDL-VDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKI 80 (201)
T ss_dssp --CTTHHHHHHHHHHHHTCHHHHTTSEEEEE-CSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCC
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCEEEEE-CCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCc
Confidence 5668899999999999987 478999997 56799999999999999999999986665 89999999999999999
Q ss_pred ccccee-ccceeeCccccCccchHH---------HHHhhhc--ccccccC-----CCchhhHHHHhHHhh
Q psy621 80 LTKTFE-ASSFISAPLYTESWLRSF---------VSYVRRN--QDFLNVT-----IDTREGFLKTLNDLW 132 (289)
Q Consensus 80 ~~~~~e-~~~~~~~~~~~~~Wl~~y---------~~~l~~~--~~~~n~~-----~~~~~~F~~~l~~~~ 132 (289)
+|||+. .+|.+|++++.+.|.+++ +.+|... ++++|.. .++++.|.+.++++-
T Consensus 81 ~HPnv~~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~p~p~~p~n~~aa~~~~~~~~~f~~~a~~~~ 150 (201)
T 3k9o_A 81 WHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWA 150 (201)
T ss_dssp CBTTBCTTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCcCCCCeeeCcccccCCCCCCCHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHCHHHHHHHHHHHH
Confidence 999998 489999999999998884 3344321 3344433 257888998888743
No 63
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=99.87 E-value=3.1e-22 Score=161.31 Aligned_cols=125 Identities=21% Similarity=0.302 Sum_probs=102.0
Q ss_pred hHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceeccccccce
Q psy621 7 SSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTKTF 84 (289)
Q Consensus 7 ~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~~~ 84 (289)
+.+.+||+||+++|++++++|+.+...+++|+++|++.|. |++|+|+||.|++.+ +++||++||+++|.++++|||+
T Consensus 3 m~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV 81 (155)
T 1wzv_A 3 HMASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNV 81 (155)
T ss_dssp --CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred chHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcC
Confidence 4578999999999999999999994347889999999999 999999999886655 8999999999999999999999
Q ss_pred eccceeeCccc-cCccchHH---------HHHhhh-c-ccccccCC-----CchhhHHHHhHHhh
Q psy621 85 EASSFISAPLY-TESWLRSF---------VSYVRR-N-QDFLNVTI-----DTREGFLKTLNDLW 132 (289)
Q Consensus 85 e~~~~~~~~~~-~~~Wl~~y---------~~~l~~-~-~~~~n~~~-----~~~~~F~~~l~~~~ 132 (289)
..+|.+|++++ .+.|.+++ +.+|.. + ++++|.++ ++.+.|.+.++++-
T Consensus 82 ~~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~y~~~~r~~~ 146 (155)
T 1wzv_A 82 DENGQICLPIISSENWKPCTKTCQVLEALNVLVNRPNIREPLRMDLADLLTQNPELFRKNAEEFT 146 (155)
T ss_dssp CTTCBCCCGGGCTTTCCTTCCHHHHHHHHHHHHHSCCSSSCSSHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCCCeEeecCCCccCCCCCCcHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 89998874 333332 1 33444332 57777888877743
No 64
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=99.87 E-value=4.8e-22 Score=166.78 Aligned_cols=83 Identities=36% Similarity=0.749 Sum_probs=73.3
Q ss_pred hHHHHHHHHHHHHHHh---CCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCC
Q psy621 168 NMEKEMVKELRRIAHE---SSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGP 244 (289)
Q Consensus 168 ~~~~~~~~~~r~ia~~---~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp 244 (289)
...+|+++|++++.++ .+.++.+. +.++|+++|+++|.||
T Consensus 5 ~a~~Rl~kEl~~l~~~~~~~~~~i~~~-------------------------------------~~~~nl~~w~~~i~Gp 47 (201)
T 3k9o_A 5 IAVQRIKREFKEVLKSEETSKNQIKVD-------------------------------------LVDENFTELRGEIAGP 47 (201)
T ss_dssp TTHHHHHHHHHHHHTCHHHHTTSEEEE-------------------------------------ECSTTSSEEEEEEECC
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEE-------------------------------------ECCCCccEEEEEEECC
Confidence 3568999999999875 24566664 5678999999999999
Q ss_pred CCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCCC
Q psy621 245 PDTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGTA 287 (289)
Q Consensus 245 ~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~~ 287 (289)
++|||+||+|+++|.||++||++||+|+|.|+||||||+..+|
T Consensus 48 ~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~~G 90 (201)
T 3k9o_A 48 PDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTG 90 (201)
T ss_dssp TTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTC
T ss_pred CCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCCCcCCCC
Confidence 9999999999999999999999999999999999999997555
No 65
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=99.87 E-value=3.8e-22 Score=161.66 Aligned_cols=87 Identities=31% Similarity=0.531 Sum_probs=73.1
Q ss_pred hHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCCC
Q psy621 168 NMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPDT 247 (289)
Q Consensus 168 ~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~t 247 (289)
...+|+++|++++.++.+.++.+.... ....++|+++|+++|.||++|
T Consensus 7 ~a~~RL~kE~~~l~~~~~~g~~~~p~~--------------------------------~~~~~~nl~~w~~~i~Gp~~t 54 (161)
T 2grr_A 7 IALSRLAQERKAWRKDHPFGFVAVPTK--------------------------------NPDGTMNLMNWECAIPGKKGT 54 (161)
T ss_dssp HHHHHHHHHHHHHHHSCCTTCEEEEEE--------------------------------CTTSCEEEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEecc--------------------------------ccCCCCCccEEEEEEECCCCC
Confidence 456899999999999876666654100 001246899999999999999
Q ss_pred CCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 248 LYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 248 ~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
||+||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 55 pyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G 93 (161)
T 2grr_A 55 PWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHPNVYPSG 93 (161)
T ss_dssp TTTTCEEEEEEECCTTTTSSCCEEEESSCCCSTTBCTTS
T ss_pred CccCCEEEEEEEcCcccCCCCCEEEEecCcccCCCCCCC
Confidence 999999999999999999999999999999999999765
No 66
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=99.87 E-value=6.1e-22 Score=161.50 Aligned_cols=127 Identities=20% Similarity=0.262 Sum_probs=104.3
Q ss_pred CCChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceeccccc
Q psy621 4 VPTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLT 81 (289)
Q Consensus 4 ~~~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~ 81 (289)
..++.+.+||+|||++|++++++|+.+.+.+++|++.|.+.| ||++|+|+||.|++.| +++||++||+++|.++++|
T Consensus 10 ~~~s~~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~H 88 (167)
T 3fn1_B 10 RRVSVRDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWH 88 (167)
T ss_dssp CCCCHHHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCC
T ss_pred cchhHHHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCccc
Confidence 445679999999999999999999999976778999999988 8999999999886655 8999999999999999999
Q ss_pred cceeccceeeCccccC------ccchHH---------HHHhhh--c-ccccccCC-----CchhhHHHHhHHh
Q psy621 82 KTFEASSFISAPLYTE------SWLRSF---------VSYVRR--N-QDFLNVTI-----DTREGFLKTLNDL 131 (289)
Q Consensus 82 ~~~e~~~~~~~~~~~~------~Wl~~y---------~~~l~~--~-~~~~n~~~-----~~~~~F~~~l~~~ 131 (289)
||+..+|.+|++++.. .|.+++ +.+|.. + ++++|.++ ++.+.|.+.++++
T Consensus 89 Pnv~~~G~iCl~iL~~~~~~~~~W~p~~~i~~vl~~i~~ll~~~pn~~~p~n~eaa~~~~~~~~~f~~~~r~~ 161 (167)
T 3fn1_B 89 PNITETGEICLSLLREHSIDGTGWAPTRTLKDVVWGLNSLFTDLLNFDDPLNIEAAEHHLRDKEDFRNKVDDY 161 (167)
T ss_dssp SSBCTTCCBCCGGGSBCSSSTTSBCTTCCHHHHHHHHHHTTTTTCCSSSCSCHHHHHHHHHCHHHHHHHHHHH
T ss_pred CCCCCCCEEechhhccCCCCCCCCCCcCcHHHHHHHHHHHHcCCCCCCcchhHHHHHHHHHCHHHHHHHHHHH
Confidence 9999999999999865 798873 344432 2 23333322 5777788877763
No 67
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=99.87 E-value=6.9e-22 Score=170.25 Aligned_cols=128 Identities=20% Similarity=0.292 Sum_probs=106.8
Q ss_pred CCChHHHHHHHHHHHHhhhC---CCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceecc
Q psy621 4 VPTSSALRALSMEYKSLQEE---PVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIE 78 (289)
Q Consensus 4 ~~~~~~~~Rl~kE~~~l~~~---~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~ 78 (289)
.|++.|.+||+|||++|+++ ++.|+.+.+ .++|+++|++.|.||++|+|+||.|.+.| +++||++||+++|.++
T Consensus 53 ~Ms~~a~~RL~kEl~~l~~~~~~~~~gi~v~p-~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~ 131 (253)
T 3e46_A 53 DMANIAVQRIKREFKEVLKSEETSKNQIKVDL-VDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITK 131 (253)
T ss_dssp CCCHHHHHHHHHHHHHHHHCHHHHTTSEEEEE-CSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSC
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCCCCEEEEE-CCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCC
Confidence 46788999999999999987 578999997 56799999999999999999999986665 8999999999999999
Q ss_pred cccccee-ccceeeCccccCccchHH---------HHHhhhc--ccccccC-----CCchhhHHHHhHHhh
Q psy621 79 NLTKTFE-ASSFISAPLYTESWLRSF---------VSYVRRN--QDFLNVT-----IDTREGFLKTLNDLW 132 (289)
Q Consensus 79 ~~~~~~e-~~~~~~~~~~~~~Wl~~y---------~~~l~~~--~~~~n~~-----~~~~~~F~~~l~~~~ 132 (289)
++|||+. .+|.+|++++.+.|.+++ +.+|... ++++|.. .++++.|.+.++++-
T Consensus 132 i~HPNV~~~~G~ICL~iL~~~WsP~~ti~~vL~sI~~ll~~pnp~~Pln~eaa~l~~~d~~~f~~~ar~~t 202 (253)
T 3e46_A 132 IWHPNISSVTGAICLDILKDQWAAAMTLRTVLLSLQALLAAAEPDDPQDAVVANQYKQNPEMFKQTARLWA 202 (253)
T ss_dssp CCBTTBCTTTCBBCCGGGTTCCCTTCCHHHHHHHHHHHHHSCCTTSCSCHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CccCCccCCCCeeecccccCCCCCCCCHHHHHHHHHHHhcCCCCCChhhHHHHHHHHHCHHHHHHHHHHHH
Confidence 9999998 489999999999998885 3444321 3444433 267888999888743
No 68
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=99.86 E-value=3.9e-22 Score=159.89 Aligned_cols=59 Identities=39% Similarity=0.859 Sum_probs=55.4
Q ss_pred cCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCCC
Q psy621 229 VNDDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGTA 287 (289)
Q Consensus 229 ~~~~~~~~w~~~i~gp~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~~ 287 (289)
+.++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+..+|
T Consensus 23 ~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~~G 81 (152)
T 2onu_A 23 LNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEASG 81 (152)
T ss_dssp EETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTTC
T ss_pred EccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCcCC
Confidence 45689999999999999999999999999999999999999999999999999996544
No 69
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=99.86 E-value=1e-21 Score=158.10 Aligned_cols=100 Identities=19% Similarity=0.273 Sum_probs=89.0
Q ss_pred CCChHHHHHHHHHHHHhhhCCCCC-eEEEecCCCC--ceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceecc
Q psy621 4 VPTSSALRALSMEYKSLQEEPVEG-FRVKLVNDDN--LFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIE 78 (289)
Q Consensus 4 ~~~~~~~~Rl~kE~~~l~~~~~~g-~~~~~~~~~n--~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~ 78 (289)
.+..++.+||+||+++|++++++| +.+.+.+++| +++|++.|.||++|+|+||.|++.+ +++||++||+++|.++
T Consensus 21 ~v~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~ 100 (160)
T 2a4d_A 21 GVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTK 100 (160)
T ss_dssp CCCHHHHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred eeechHHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecC
Confidence 345779999999999999999999 7888656665 9999999999999999999986665 8999999999999999
Q ss_pred cccccee-ccceeeCcccc--CccchHH
Q psy621 79 NLTKTFE-ASSFISAPLYT--ESWLRSF 103 (289)
Q Consensus 79 ~~~~~~e-~~~~~~~~~~~--~~Wl~~y 103 (289)
++|||+. .+|.+|++++. +.|.+++
T Consensus 101 i~HPNV~~~~G~ICl~iL~~~~~WsP~~ 128 (160)
T 2a4d_A 101 INMNGVNSSNGVVDPRAISVLAKWQNSY 128 (160)
T ss_dssp CCCTTBCTTTCBBCGGGSHHHHTCCTTC
T ss_pred ceeCCEECCCCEEehhhcCCccCCCccC
Confidence 9999998 68999999876 8898875
No 70
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=99.86 E-value=1.1e-22 Score=171.44 Aligned_cols=127 Identities=18% Similarity=0.339 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEE--EcCCCCCCCcccceecccccccee
Q psy621 8 SALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAI--IEGELPHWDVNVQNQIENLTKTFE 85 (289)
Q Consensus 8 ~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~--v~~~yp~~~P~v~~~~~~~~~~~e 85 (289)
++.+||+||+++|++++++|+.+.+.+++++++|++.|.||++|+|+||.|++. ++++||++||+++|.++++|||+.
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 467999999999999999999999766667789999999999999999987655 489999999999999999999999
Q ss_pred c-cceeeCccccCccchHH---------HHHhhh-c-ccccccC-----CCchhhHHHHhHHhhcc
Q psy621 86 A-SSFISAPLYTESWLRSF---------VSYVRR-N-QDFLNVT-----IDTREGFLKTLNDLWLF 134 (289)
Q Consensus 86 ~-~~~~~~~~~~~~Wl~~y---------~~~l~~-~-~~~~n~~-----~~~~~~F~~~l~~~~~~ 134 (289)
. +|.+|++++.+.|.+++ +++|.. + ++++|.. ..+.+.|.+.++++-..
T Consensus 82 ~~~G~ICL~iL~~~WsP~~ti~~VL~sI~sLL~~Pnp~~Pln~eaa~~~~~d~~~f~~~ar~~t~~ 147 (215)
T 1tte_A 82 SVTGAICLDILRNAWSPVITLKSALISLQALLQSPEPNDPQDAEVAQHYLRDRESFNKTAALWTRL 147 (215)
T ss_dssp SSSSCCCSSTTTCCSCTTCCHHHHHHHHHHHHTSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CCCCEEECccCCCCCCCcCcHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHHH
Confidence 8 99999999999998874 334432 1 3344432 25788899988884433
No 71
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.86 E-value=5.9e-22 Score=161.30 Aligned_cols=84 Identities=27% Similarity=0.472 Sum_probs=71.0
Q ss_pred hHHHHHHHHHHHHHHhCCCC-eEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCC--cceEEEEEeCC
Q psy621 168 NMEKEMVKELRRIAHESSLN-VSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDN--LFEWEVAIFGP 244 (289)
Q Consensus 168 ~~~~~~~~~~r~ia~~~~~~-~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~--~~~w~~~i~gp 244 (289)
.+.+|+++|++++.++.+.+ +.+. +++++| +++|+++|.||
T Consensus 35 p~~~RL~kEl~~l~~~~~~g~~~~~------------------------------------~~~~~d~nl~~W~~~I~GP 78 (170)
T 2hlw_A 35 PRNFRLLEELEEGQKGVGDGTVSWG------------------------------------LEDDEDMTLTRWTGMIIGP 78 (170)
T ss_dssp CHHHHHHHHHHHHHHCCGGGCEEEE------------------------------------ESSTTCSSCCBEEEEECCC
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEE------------------------------------ecCcccccceeeEEEEeCC
Confidence 35689999999998875444 3332 134554 99999999999
Q ss_pred CCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCCC
Q psy621 245 PDTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGTA 287 (289)
Q Consensus 245 ~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~~ 287 (289)
++|||+||+|+++|.||++||++||+|+|.|+||||||+..+|
T Consensus 79 ~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPNV~~~~G 121 (170)
T 2hlw_A 79 PRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNG 121 (170)
T ss_dssp SSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSSBCSSSC
T ss_pred CCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCCEeCCCC
Confidence 9999999999999999999999999999999999999995444
No 72
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=99.86 E-value=2e-21 Score=157.05 Aligned_cols=124 Identities=17% Similarity=0.268 Sum_probs=102.3
Q ss_pred ChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceeccccccc
Q psy621 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTKT 83 (289)
Q Consensus 6 ~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~~ 83 (289)
++.+.+||+||+++| ++++|+.+...+++|+++|++.| ||++|+|+||.|++.+ +++||++||+++|.++++|||
T Consensus 4 ~~~~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 80 (160)
T 1y8x_A 4 ASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPN 80 (160)
T ss_dssp CCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTT
T ss_pred ccHHHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCc
Confidence 567899999999999 57899999844788999999988 9999999999886655 899999999999999999999
Q ss_pred eeccceeeCccccCccchHH---------HHHhhh-c-ccccccC-----CCchhhHHHHhHHhh
Q psy621 84 FEASSFISAPLYTESWLRSF---------VSYVRR-N-QDFLNVT-----IDTREGFLKTLNDLW 132 (289)
Q Consensus 84 ~e~~~~~~~~~~~~~Wl~~y---------~~~l~~-~-~~~~n~~-----~~~~~~F~~~l~~~~ 132 (289)
+..+|.+|++++.+.|.+++ +++|.. + ++++|.. .++++.|.+.+++..
T Consensus 81 v~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~Pn~~~p~n~~aa~~~~~~~~~f~~~v~~~v 145 (160)
T 1y8x_A 81 IDLEGNVCLNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSM 145 (160)
T ss_dssp BCTTCBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHSCHHHHHHHHHHHH
T ss_pred CCCCCeEEcccchhhccCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHH
Confidence 99999999999999998874 333332 1 3344433 268888999888844
No 73
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=99.86 E-value=1.1e-21 Score=157.99 Aligned_cols=81 Identities=31% Similarity=0.657 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCCCC
Q psy621 169 MEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPDTL 248 (289)
Q Consensus 169 ~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~t~ 248 (289)
..+|+++|++++.++.+.++.+.. ++++|+++|+++|. |++||
T Consensus 5 ~~~RL~kEl~~l~~~~~~~i~~~~------------------------------------~~~~~l~~w~~~I~-P~~tp 47 (155)
T 1wzv_A 5 ASMRVVKELEDLQKKPPPYLRNLS------------------------------------SDDANVLVWHALLL-PDQPP 47 (155)
T ss_dssp CHHHHHHHHHHHHHSCCTTEEEEE------------------------------------ECSSCTTEEEEEEC-CCSTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEe------------------------------------cCCCchheEEEEEc-CCCCC
Confidence 457999999999988766666521 57889999999999 99999
Q ss_pred CCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 249 YQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 249 y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
|+||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 48 yegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G 85 (155)
T 1wzv_A 48 YHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVDENG 85 (155)
T ss_dssp GGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTC
T ss_pred CCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCCCCC
Confidence 99999999999999999999999999999999999854
No 74
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=99.86 E-value=1.9e-21 Score=158.55 Aligned_cols=85 Identities=28% Similarity=0.565 Sum_probs=75.4
Q ss_pred CCchHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCC
Q psy621 165 TDGNMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGP 244 (289)
Q Consensus 165 ~~~~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp 244 (289)
......+|+++|++++.++.+.++.+. +++++|++.|+++| ||
T Consensus 11 ~~s~~~~RL~kEl~~l~~~~~~gi~~~------------------------------------~~~~~~l~~w~~~i-gp 53 (167)
T 3fn1_B 11 RVSVRDKLLVKEVAELEANLPCTCKVH------------------------------------FPDPNKLHCFQLTV-TP 53 (167)
T ss_dssp CCCHHHHHHHHHHHHHGGGSCTTEEEE------------------------------------CSSSSCTTEEEEEE-CC
T ss_pred chhHHHHHHHHHHHHHHhCCCCCEEEE------------------------------------eCCCCcceeEEEEE-CC
Confidence 345667899999999999877777664 14678999999998 99
Q ss_pred CCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 245 PDTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 245 ~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
++|||+||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 54 ~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G 95 (167)
T 3fn1_B 54 DEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITETG 95 (167)
T ss_dssp SSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCTTC
T ss_pred CCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCCCC
Confidence 999999999999999999999999999999999999999654
No 75
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=99.85 E-value=2.4e-21 Score=158.43 Aligned_cols=58 Identities=36% Similarity=0.753 Sum_probs=54.7
Q ss_pred CCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEec-CCcCCCCCCCCC
Q psy621 230 NDDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPIDYPYSPPTIRFLT-KVWHPNVYEGTA 287 (289)
Q Consensus 230 ~~~~~~~w~~~i~gp~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t-~i~hpnv~~~~~ 287 (289)
+++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.| +||||||+..+|
T Consensus 43 ~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~~i~HPni~~~~G 101 (172)
T 2y9m_A 43 DETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATG 101 (172)
T ss_dssp STTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECTTSCCCTTEETTTT
T ss_pred CCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEEeeCCeecCCCcCCCC
Confidence 7889999999999999999999999999999999999999999999 999999964444
No 76
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=99.85 E-value=2.3e-21 Score=166.99 Aligned_cols=84 Identities=36% Similarity=0.742 Sum_probs=74.3
Q ss_pred chHHHHHHHHHHHHHHh---CCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeC
Q psy621 167 GNMEKEMVKELRRIAHE---SSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFG 243 (289)
Q Consensus 167 ~~~~~~~~~~~r~ia~~---~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~g 243 (289)
....+|+++|++++.++ .+.++.+. +.++|+++|+++|.|
T Consensus 56 ~~a~~RL~kEl~~l~~~~~~~~~gi~v~-------------------------------------p~~dnl~~W~~~I~G 98 (253)
T 3e46_A 56 NIAVQRIKREFKEVLKSEETSKNQIKVD-------------------------------------LVDENFTELRGEIAG 98 (253)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHTTSEEEE-------------------------------------ECSTTSSEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCEEEE-------------------------------------ECCCcccEEEEEEEC
Confidence 45678999999999875 24566664 567899999999999
Q ss_pred CCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCCC
Q psy621 244 PPDTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGTA 287 (289)
Q Consensus 244 p~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~~ 287 (289)
|++|||+||+|+++|.||++||++||+|+|.|+||||||+..+|
T Consensus 99 P~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~~G 142 (253)
T 3e46_A 99 PPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNISSVTG 142 (253)
T ss_dssp CTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTTTC
T ss_pred CCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCccCCCC
Confidence 99999999999999999999999999999999999999997555
No 77
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=99.85 E-value=2.6e-21 Score=159.10 Aligned_cols=127 Identities=17% Similarity=0.256 Sum_probs=103.7
Q ss_pred CCChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceeccccc
Q psy621 4 VPTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLT 81 (289)
Q Consensus 4 ~~~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~ 81 (289)
..++.+.+||+||+++| ++++|+.+.+.+++|+++|++.| ||++|+|+||.|.+.+ +++||++||+++|.++++|
T Consensus 22 ~~~~~~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~H 98 (180)
T 2nvu_C 22 KKASAAQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYH 98 (180)
T ss_dssp CSCCHHHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCB
T ss_pred CCccHHHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCcc
Confidence 45677999999999999 57899999844788999999988 9999999999886655 8999999999999999999
Q ss_pred cceeccceeeCccccCccchHH---------HHHhhh-c-ccccccCC-----CchhhHHHHhHHhhc
Q psy621 82 KTFEASSFISAPLYTESWLRSF---------VSYVRR-N-QDFLNVTI-----DTREGFLKTLNDLWL 133 (289)
Q Consensus 82 ~~~e~~~~~~~~~~~~~Wl~~y---------~~~l~~-~-~~~~n~~~-----~~~~~F~~~l~~~~~ 133 (289)
||+..+|.+|++++.+.|.+++ +++|.. + ++++|..+ ++.+.|.+.+++...
T Consensus 99 PNV~~~G~iCl~iL~~~W~p~~~i~~vL~si~~ll~~Pn~~~p~n~~aa~~~~~d~~~f~~~v~~~v~ 166 (180)
T 2nvu_C 99 PNIDLEGNVALNILREDWKPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMR 166 (180)
T ss_dssp TTBCTTSBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred CCCCCCCcEEcccccccCCCCCCHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHHh
Confidence 9999999999999999998874 333332 1 33444332 577888888888543
No 78
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=99.85 E-value=1.4e-21 Score=159.27 Aligned_cols=58 Identities=34% Similarity=0.769 Sum_probs=55.6
Q ss_pred cCCCCcceEEEEEeCCCCCCCC--CCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 229 VNDDNLFEWEVAIFGPPDTLYQ--GGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 229 ~~~~~~~~w~~~i~gp~~t~y~--~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
++++|+++|+++|.||++|||+ ||.|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 44 ~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G 103 (167)
T 4ds2_A 44 VDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTVRFVTPVYSPLVTGEG 103 (167)
T ss_dssp EEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEEEESSCCCCSSCCTTS
T ss_pred eCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEEEEeCCcccccCCCCC
Confidence 6788999999999999999999 999999999999999999999999999999999655
No 79
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=99.85 E-value=5.1e-22 Score=167.36 Aligned_cols=83 Identities=30% Similarity=0.729 Sum_probs=72.3
Q ss_pred HHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCCCC
Q psy621 169 MEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPDTL 248 (289)
Q Consensus 169 ~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~t~ 248 (289)
..+|+++|++++.++.+.++.+. |.+++++++|+++|.||++||
T Consensus 3 a~~RL~kEl~~l~~~~~~gi~~~------------------------------------p~~~~~l~~w~~~I~GP~~Tp 46 (215)
T 1tte_A 3 RAKRIMKEIQAVKDDPAAHITLE------------------------------------FVSESDIHHLKGTFLGPPGTP 46 (215)
T ss_dssp THHHHHHHHHHHHTTTCTTCEEC------------------------------------CCSSSSCCEEEEECCEEEEET
T ss_pred HHHHHHHHHHHHHhCCCCCEEEE------------------------------------ECCCccccccEEEEeCCCCCC
Confidence 45799999999998876666664 134446779999999999999
Q ss_pred CCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCCC
Q psy621 249 YQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGTA 287 (289)
Q Consensus 249 y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~~ 287 (289)
|+||+|+++|.||++||++||+|+|.|+||||||++.+|
T Consensus 47 YegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~~G 85 (215)
T 1tte_A 47 YEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNISSVTG 85 (215)
T ss_dssp TEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSCSSSS
T ss_pred cCCCEEEEEEeCCccCCCCCCcccccCCCccCcCcCCCC
Confidence 999999999999999999999999999999999998444
No 80
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=99.85 E-value=1.1e-21 Score=157.91 Aligned_cols=124 Identities=21% Similarity=0.382 Sum_probs=100.1
Q ss_pred HHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceecccccccee
Q psy621 8 SALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTKTFE 85 (289)
Q Consensus 8 ~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~~~e 85 (289)
+|.+||+||+++|++++++|+.+.+.+++|+++|++.|. |++|+|+||.|.+.+ +++||++||+++|.++++|||+.
T Consensus 2 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 80 (154)
T 1c4z_D 2 AASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNID 80 (154)
T ss_dssp --CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred cHHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCC
Confidence 467999999999999999999877667889999999998 999999999886655 89999999999999999999999
Q ss_pred ccceeeCcccc-CccchHH---------HHHhhh-c-ccccccC-----CCchhhHHHHhHHhh
Q psy621 86 ASSFISAPLYT-ESWLRSF---------VSYVRR-N-QDFLNVT-----IDTREGFLKTLNDLW 132 (289)
Q Consensus 86 ~~~~~~~~~~~-~~Wl~~y---------~~~l~~-~-~~~~n~~-----~~~~~~F~~~l~~~~ 132 (289)
.+|.+|++++. +.|.+++ +++|.. + ++++|.+ .++.+.|.+.++++-
T Consensus 81 ~~G~iCl~iL~~~~W~p~~~i~~vl~~i~~ll~~p~~~~p~n~~aa~~~~~~~~~f~~~~~~~~ 144 (154)
T 1c4z_D 81 EKGQVCLPVISAENWKPATKTDQVIQSLIALVNDPQPEHPLRADLAEEYSKDRKKFCKNAEEFT 144 (154)
T ss_dssp TTCBBCCTTTSSSSCCTTCCHHHHHHHHHHHHHSCCCSSCSCHHHHHHHHTCSSTTHHHHHHHH
T ss_pred CCCEEECCCCCCCCCCCCCcHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999985 8898874 333332 1 3333332 256677888777743
No 81
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=99.84 E-value=3.4e-21 Score=155.71 Aligned_cols=58 Identities=29% Similarity=0.601 Sum_probs=54.8
Q ss_pred cCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCCC
Q psy621 229 VNDDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGTA 287 (289)
Q Consensus 229 ~~~~~~~~w~~~i~gp~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~~ 287 (289)
++++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+||||||+.+|.
T Consensus 29 ~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G~ 86 (160)
T 1y8x_A 29 SDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGN 86 (160)
T ss_dssp SSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTCB
T ss_pred ccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCCCCe
Confidence 5688999999998 999999999999999999999999999999999999999998753
No 82
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=99.84 E-value=3.8e-21 Score=158.12 Aligned_cols=58 Identities=29% Similarity=0.601 Sum_probs=54.9
Q ss_pred cCCCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCCC
Q psy621 229 VNDDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGTA 287 (289)
Q Consensus 229 ~~~~~~~~w~~~i~gp~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~~ 287 (289)
++++|+++|+++| ||++|||+||+|+++|.||++||++||+|+|.|+||||||+.+|.
T Consensus 49 p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~~G~ 106 (180)
T 2nvu_C 49 SDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGN 106 (180)
T ss_dssp SSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCTTSB
T ss_pred cccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCCCCc
Confidence 5688999999998 999999999999999999999999999999999999999998753
No 83
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=99.84 E-value=4.2e-21 Score=151.59 Aligned_cols=97 Identities=15% Similarity=0.215 Sum_probs=82.4
Q ss_pred ChHHHHHHHHHHHHhhhC-CCCCeEEEecCCC--CceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceecccc
Q psy621 6 TSSALRALSMEYKSLQEE-PVEGFRVKLVNDD--NLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENL 80 (289)
Q Consensus 6 ~~~~~~Rl~kE~~~l~~~-~~~g~~~~~~~~~--n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~ 80 (289)
..++.+||+||+++|+++ +++|+.+.+.+++ |+++|++.|.||++|+|+||.|++.+ +++||++||+++|.++++
T Consensus 4 ~~~~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 83 (138)
T 1jat_B 4 KVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKIN 83 (138)
T ss_dssp CCCHHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCC
T ss_pred hHHHHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccc
Confidence 346779999999999998 8999999975544 59999999999999999999986665 899999999999999999
Q ss_pred ccceecc-cee--eCccccCccchHH
Q psy621 81 TKTFEAS-SFI--SAPLYTESWLRSF 103 (289)
Q Consensus 81 ~~~~e~~-~~~--~~~~~~~~Wl~~y 103 (289)
|||+... |.+ |++++. .|.+++
T Consensus 84 HPnv~~~~G~i~~cL~~l~-~W~p~~ 108 (138)
T 1jat_B 84 LPCVNPTTGEVQTDFHTLR-DWKRAY 108 (138)
T ss_dssp CTTBCTTTCBBCTTSHHHH-TCCTTC
T ss_pred cCCEeCCCCEEeeecccCC-CCCCcC
Confidence 9999986 898 888754 788775
No 84
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=99.84 E-value=5.7e-21 Score=153.45 Aligned_cols=99 Identities=19% Similarity=0.322 Sum_probs=87.5
Q ss_pred CCChHHHHHHHHHHHHhhhC-CCCCeEEEecCCC--CceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceecc
Q psy621 4 VPTSSALRALSMEYKSLQEE-PVEGFRVKLVNDD--NLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIE 78 (289)
Q Consensus 4 ~~~~~~~~Rl~kE~~~l~~~-~~~g~~~~~~~~~--n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~ 78 (289)
..+.++.+||+||+++|+++ +++|+.+.+.+++ |+++|.+.|.||++|+|+||.|.+.+ +++||++||+++|.++
T Consensus 17 ~~~~~~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~ 96 (156)
T 2q0v_A 17 QGIVPRSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTK 96 (156)
T ss_dssp SSCCCHHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBC
T ss_pred cccchHHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcc
Confidence 34567889999999999998 8899999975543 59999999999999999999986655 8999999999999999
Q ss_pred ccccceecccee---eCccccCccchHH
Q psy621 79 NLTKTFEASSFI---SAPLYTESWLRSF 103 (289)
Q Consensus 79 ~~~~~~e~~~~~---~~~~~~~~Wl~~y 103 (289)
++|||+..+|.+ |++++. .|.+++
T Consensus 97 i~HPNV~~~G~icisCL~iL~-~WsP~~ 123 (156)
T 2q0v_A 97 IEMSCVDNCGRVIKNNLHILK-NWNRNY 123 (156)
T ss_dssp CCCTTBCTTSBBCGGGSHHHH-TCCTTC
T ss_pred cccCCCccCCeEehhhccccc-CCCCcC
Confidence 999999999999 888875 498875
No 85
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=99.84 E-value=6.6e-21 Score=155.46 Aligned_cols=57 Identities=37% Similarity=0.742 Sum_probs=54.1
Q ss_pred CCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCCC
Q psy621 231 DDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGTA 287 (289)
Q Consensus 231 ~~~~~~w~~~i~gp~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~~ 287 (289)
++|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+..+|
T Consensus 34 ~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~~G 90 (171)
T 1yf9_A 34 SDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDERSG 90 (171)
T ss_dssp CSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTC
T ss_pred CCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCcccCC
Confidence 679999999999999999999999999999999999999999999999999996444
No 86
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=99.83 E-value=8.8e-21 Score=155.39 Aligned_cols=56 Identities=38% Similarity=0.861 Sum_probs=53.0
Q ss_pred CCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCCC
Q psy621 232 DNLFEWEVAIFGPPDTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGTA 287 (289)
Q Consensus 232 ~~~~~w~~~i~gp~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~~ 287 (289)
+|+++|+++|.||++|||+||+|+++|.||++||++||+|+|.|+||||||+..+|
T Consensus 48 ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~~G 103 (179)
T 2z5d_A 48 GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEASG 103 (179)
T ss_dssp EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTTTC
T ss_pred CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCCCC
Confidence 47899999999999999999999999999999999999999999999999998444
No 87
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=99.83 E-value=3.6e-21 Score=154.89 Aligned_cols=79 Identities=35% Similarity=0.741 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCCCCCC
Q psy621 171 KEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPDTLYQ 250 (289)
Q Consensus 171 ~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~t~y~ 250 (289)
+|+++|++++.++.+.++.+. +++++|+++|+++|. |++|||+
T Consensus 5 ~RL~kEl~~l~~~~~~~~~~~------------------------------------~~~~~~l~~w~~~i~-P~~tpye 47 (154)
T 1c4z_D 5 RRLMKELEEIRKCGMKNFRNI------------------------------------QVDEANLLTWQGLIV-PDNPPYD 47 (154)
T ss_dssp TTHHHHHTTCSSSCCSSCEEE------------------------------------CSSCSSSSEEEEEEC-CCSSSCC
T ss_pred HHHHHHHHHHHhCCCCCEEEe------------------------------------eCCCCchheEEEEEe-CCCCCcc
Confidence 578899998887755554422 257789999999997 9999999
Q ss_pred CCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 251 GGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 251 ~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 48 gg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~G 83 (154)
T 1c4z_D 48 KGAFRIEINFPAEYPFKPPKITFKTKIYHPNIDEKG 83 (154)
T ss_dssp SCCEEEEEECCTTTTTSCCEEEESSCCCCTTBCTTC
T ss_pred CCeEEEEEEeCCCCCCCCCEEEEeCCCccccCCCCC
Confidence 999999999999999999999999999999999865
No 88
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.83 E-value=1.4e-20 Score=173.33 Aligned_cols=127 Identities=24% Similarity=0.382 Sum_probs=106.7
Q ss_pred ChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceeccccccc
Q psy621 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTKT 83 (289)
Q Consensus 6 ~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~~ 83 (289)
++.|.|||+||+++|++++++|+.+.| .++|+++|++.|.||++|+|+||.|++.+ +++||++||+++|.++++|||
T Consensus 1 ~s~a~~RL~kEl~~l~~~~~~~~~~~p-~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 79 (399)
T 4ddg_A 1 GAMALKRIHKELNDLARDPPAQCSAGP-VGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPN 79 (399)
T ss_dssp CHHHHHHHHHHHHHHHHSCCSSEEEEE-ETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTT
T ss_pred CcHHHHHHHHHHHHHHhCCCCCEEEEE-cCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccc
Confidence 357899999999999999999999997 56799999999999999999999986665 899999999999999999999
Q ss_pred eeccceeeCccccCccchHH---------HHHhhh-c-ccccccCC-----CchhhHHHHhHHhhc
Q psy621 84 FEASSFISAPLYTESWLRSF---------VSYVRR-N-QDFLNVTI-----DTREGFLKTLNDLWL 133 (289)
Q Consensus 84 ~e~~~~~~~~~~~~~Wl~~y---------~~~l~~-~-~~~~n~~~-----~~~~~F~~~l~~~~~ 133 (289)
+..+|.+|++++.+.|.+++ +++|.. + ++++|..+ ++++.|.+.++++-.
T Consensus 80 v~~~G~iCl~il~~~W~p~~~i~~vL~~i~~ll~~pnp~~p~n~~aa~~~~~d~~~y~~~~~~~~~ 145 (399)
T 4ddg_A 80 INSNGSISLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQ 145 (399)
T ss_dssp BCTTCBBCCGGGTTSCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred cCCCCeEeCcccccCCCccccHHHHHHHHHHHHcCCCCCchhhHHHHHHHHHCHHHHHHHHHHHHH
Confidence 99999999999999998885 334432 1 34444332 577888888877543
No 89
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=99.83 E-value=1.8e-21 Score=158.57 Aligned_cols=100 Identities=15% Similarity=0.276 Sum_probs=90.3
Q ss_pred CCCChHHHHHHHHHHHHhhhCC------------CCCeEEEecCCCCceEEEEEEeCCCCCCcc--CcEEEEEE--cCCC
Q psy621 3 QVPTSSALRALSMEYKSLQEEP------------VEGFRVKLVNDDNLFEWEVAIFGPPDTLYQ--GGYFKAII--EGEL 66 (289)
Q Consensus 3 ~~~~~~~~~Rl~kE~~~l~~~~------------~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~--g~~~~v~v--~~~y 66 (289)
+.|++.+.|||+||+++|++++ +.|+.+.+ +++|+++|++.|.||++|+|+ ||.|++.+ +++|
T Consensus 3 ~~Ms~~a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~-~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~Y 81 (167)
T 4ds2_A 3 GSMKNISNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSV-DTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDY 81 (167)
T ss_dssp --CCCCCCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEE-EESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTT
T ss_pred ccccHHHHHHHHHHHHHHHhCcccccccccccCCCCcEEEEe-CCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCC
Confidence 3577789999999999999987 78899885 778999999999999999999 89886655 8999
Q ss_pred CCCCcccceeccccccceeccceeeCccccCccchHH
Q psy621 67 PHWDVNVQNQIENLTKTFEASSFISAPLYTESWLRSF 103 (289)
Q Consensus 67 p~~~P~v~~~~~~~~~~~e~~~~~~~~~~~~~Wl~~y 103 (289)
|++||+++|.++++|||+..+|.+|++++.+.|.+++
T Consensus 82 P~~pP~v~f~t~i~HPnv~~~G~iCl~il~~~W~p~~ 118 (167)
T 4ds2_A 82 PHEPPTVRFVTPVYSPLVTGEGGICDRMVNDFWTPDQ 118 (167)
T ss_dssp TTSCCEEEESSCCCCSSCCTTSCCCTHHHHTTCCTTS
T ss_pred CCCCCEEEEeCCcccccCCCCCEEEcccCcCCCCCCC
Confidence 9999999999999999999999999999999999885
No 90
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=99.83 E-value=6.3e-21 Score=155.23 Aligned_cols=98 Identities=18% Similarity=0.276 Sum_probs=86.5
Q ss_pred ChHHHHHHHHHHHHhhhCCCCC-eEEEecCCCC--ceEEEEEEeCCCCCCccCcEEEE--EEcCCCCCCCcccceecccc
Q psy621 6 TSSALRALSMEYKSLQEEPVEG-FRVKLVNDDN--LFEWEVAIFGPPDTLYQGGYFKA--IIEGELPHWDVNVQNQIENL 80 (289)
Q Consensus 6 ~~~~~~Rl~kE~~~l~~~~~~g-~~~~~~~~~n--~~~w~~~i~gp~~t~y~g~~~~v--~v~~~yp~~~P~v~~~~~~~ 80 (289)
..++.+||+|||++|++++++| +.+.+.+++| +++|++.|.||++|+|+||.|++ .++++||++||+++|.++++
T Consensus 33 ~~p~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~ 112 (170)
T 2hlw_A 33 KVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKIN 112 (170)
T ss_dssp CCCHHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCC
T ss_pred cCHHHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccc
Confidence 3568899999999999999999 6777656665 99999999999999999998755 45899999999999999999
Q ss_pred cccee-ccceeeCcccc--CccchHH
Q psy621 81 TKTFE-ASSFISAPLYT--ESWLRSF 103 (289)
Q Consensus 81 ~~~~e-~~~~~~~~~~~--~~Wl~~y 103 (289)
|||+. .+|.+|++++. +.|.+++
T Consensus 113 HPNV~~~~G~ICl~iL~~~~~WsP~~ 138 (170)
T 2hlw_A 113 MNGVNSSNGVVDPRAISVLAKWQNSY 138 (170)
T ss_dssp CSSBCSSSCBBCTTTCHHHHTCCSSC
T ss_pred cCCEeCCCCEEEhhhcCCCCCCCccC
Confidence 99998 79999999876 7898774
No 91
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.83 E-value=1.3e-20 Score=155.94 Aligned_cols=96 Identities=20% Similarity=0.460 Sum_probs=79.3
Q ss_pred CChHHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceecccccc
Q psy621 5 PTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTK 82 (289)
Q Consensus 5 ~~~~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~ 82 (289)
.++.+.+||+||+++|++++++|+.+.+ +++|+++|++.|.||++|+|+||.|++.| +++||++||+|+|.++ |+
T Consensus 11 ~~~~a~~RL~kEl~~l~~~~~~~i~~~p-~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~ 87 (187)
T 2f4w_A 11 APTTATQRLKQDYLRIKKDPVPYICAEP-LPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NG 87 (187)
T ss_dssp ---CHHHHHHHHHHHHHHSCCTTEEEEE-ETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CS
T ss_pred CccHHHHHHHHHHHHHHhCCCCCEEEEE-cCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cc
Confidence 3455889999999999999999999986 56799999999999999999999986655 8999999999999998 88
Q ss_pred ceeccceeeCccc---cCccchHH
Q psy621 83 TFEASSFISAPLY---TESWLRSF 103 (289)
Q Consensus 83 ~~e~~~~~~~~~~---~~~Wl~~y 103 (289)
+|+.+|.+|++++ .+.|.+++
T Consensus 88 ~~~~~G~ICL~iL~~~~~~W~P~~ 111 (187)
T 2f4w_A 88 RFKCNTRLCLSITDFHPDTWNPAW 111 (187)
T ss_dssp SBCTTSCBC----------CCTTC
T ss_pred eeccCCeEeeeccccCccCCCCcC
Confidence 9999999999998 58898875
No 92
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=99.82 E-value=3.7e-20 Score=153.52 Aligned_cols=126 Identities=15% Similarity=0.159 Sum_probs=104.8
Q ss_pred CCChHHHHHHHHHHHHhhhCCCCCeEEEe---cCCCCce---EEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccce
Q psy621 4 VPTSSALRALSMEYKSLQEEPVEGFRVKL---VNDDNLF---EWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQN 75 (289)
Q Consensus 4 ~~~~~~~~Rl~kE~~~l~~~~~~g~~~~~---~~~~n~~---~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~ 75 (289)
..+++|.+||+|||++|+ +++|+.+.. .+++|++ +|++.|. |++|+|+||.|++.| +++||++||+++|
T Consensus 25 ~~~s~a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f 101 (190)
T 3o2u_A 25 PNLSAARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVC 101 (190)
T ss_dssp CCCCHHHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEE
T ss_pred CCccHHHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEE
Confidence 456789999999999998 778999983 4788999 9999997 788999999886655 8999999999999
Q ss_pred eccccccceeccceeeCccccCccchHH---------HHHhhh-c-ccccccCC-----CchhhHHHHhHHhh
Q psy621 76 QIENLTKTFEASSFISAPLYTESWLRSF---------VSYVRR-N-QDFLNVTI-----DTREGFLKTLNDLW 132 (289)
Q Consensus 76 ~~~~~~~~~e~~~~~~~~~~~~~Wl~~y---------~~~l~~-~-~~~~n~~~-----~~~~~F~~~l~~~~ 132 (289)
.++++|||+..+|.+|++++.+.|.+++ +.+|.. + ++++|.++ ++.+.|.+.++++.
T Consensus 102 ~t~i~HPnV~~~G~iCl~iL~~~W~p~~~i~~vL~~i~~ll~~pn~~~pln~~aa~~~~~d~~~f~~~ar~~~ 174 (190)
T 3o2u_A 102 LKKIFHPNIDLKGNVCLNILREDWSPALDLQSIITGLLFLFLEPNPNDPLNKDAAKLLCEGEKEFAEAVRLTM 174 (190)
T ss_dssp CSCCCCTTBCTTSBBCCGGGTTTCCTTCCHHHHHHHHHHHHHSCCTTSCSSHHHHHHHHTCHHHHHHHHHHHH
T ss_pred ecCcccCCCCCCCeEechhccCCCCCCCCHHHHHHHHHHHHhCCCCCcchhHHHHHHHHHCHHHHHHHHHHHH
Confidence 9999999999999999999999998874 333432 1 34444432 68899999999854
No 93
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.82 E-value=2.8e-20 Score=171.37 Aligned_cols=82 Identities=37% Similarity=0.770 Sum_probs=75.5
Q ss_pred hHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCCC
Q psy621 168 NMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPDT 247 (289)
Q Consensus 168 ~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~t 247 (289)
...+|+++|++++.++.+.++.+. +.++|+++|+++|.||++|
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~~~~~-------------------------------------p~~~nl~~w~~~i~Gp~~t 45 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQCSAG-------------------------------------PVGDDMFHWQATIMGPNDS 45 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEE-------------------------------------EETTEEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEE-------------------------------------EcCCcceEEEEEEECCCCC
Confidence 356899999999999877777765 5678999999999999999
Q ss_pred CCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 248 LYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 248 ~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
||+||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 46 pyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G 84 (399)
T 4ddg_A 46 PYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNG 84 (399)
T ss_dssp SSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCTTC
T ss_pred CCCCCEEEEEEECCcccCCCCcEEEeeccccccccCCCC
Confidence 999999999999999999999999999999999999855
No 94
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=99.82 E-value=4e-21 Score=154.04 Aligned_cols=121 Identities=18% Similarity=0.369 Sum_probs=97.2
Q ss_pred HHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceecccccccee
Q psy621 8 SALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTKTFE 85 (289)
Q Consensus 8 ~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~~~e 85 (289)
+|.+||+||+++|+++ |+.+.+ .++|+++|++.|.||++|+|+||.|++.+ +++||++||+++|.++++|||+.
T Consensus 2 sa~~Rl~kEl~~l~~~---~~~v~~-~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~ 77 (152)
T 2onu_A 2 TSLTRKQCDFTKLIMA---GYDLEL-NNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVD 77 (152)
T ss_dssp -CCCHHHHTHHHHHHH---TCCEEE-ETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred hHHHHHHHHHHhcCcC---CCEEEE-ccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCc
Confidence 4569999999999884 788886 46799999999999999999999986655 89999999999999999999998
Q ss_pred -ccceeeCccccCccchHH----------HHHhhh-c-ccccccCC-----CchhhHHHHhHHhh
Q psy621 86 -ASSFISAPLYTESWLRSF----------VSYVRR-N-QDFLNVTI-----DTREGFLKTLNDLW 132 (289)
Q Consensus 86 -~~~~~~~~~~~~~Wl~~y----------~~~l~~-~-~~~~n~~~-----~~~~~F~~~l~~~~ 132 (289)
.+|.+|++++.+.|.+++ +.+|.. + ++++|.++ ++++.|.+.++++-
T Consensus 78 ~~~G~iCl~il~~~W~p~~~i~~vl~~ii~~Ll~~Pn~~~P~n~~aa~~~~~d~~~y~~~v~~~~ 142 (152)
T 2onu_A 78 EASGSVCLDVINQTWTPLYSLVNVFEVFLPQLLTYPNPSDPLNSDAASLLMKDKNIYEEKVKEYV 142 (152)
T ss_dssp TTTCBBCHHHHHHHCCTTCCHHHHHHTHHHHHHHSCCCSSCSSHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CcCCeEecccccccCCCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHH
Confidence 589999999988998863 233332 1 34444332 57778888887743
No 95
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=99.81 E-value=1.5e-20 Score=154.05 Aligned_cols=120 Identities=18% Similarity=0.330 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceecccccccee
Q psy621 8 SALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTKTFE 85 (289)
Q Consensus 8 ~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~~~e 85 (289)
++.+||+|||++|++ +|+.+.+. +|+++|.+.|.||++|+|+||.|.+.+ +++||++||+++|.++++|||+.
T Consensus 25 ~a~~RL~kEl~~l~~---~g~~v~~~--ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~ 99 (179)
T 2z5d_A 25 PGKRRMDTDVIKLIE---SKHEVTIL--GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNID 99 (179)
T ss_dssp HHHHHHHHHHHHHHH---SSSCEEEE--EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred HHHHHHHHHHHhcCc---CCCEEEEC--CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCC
Confidence 589999999999985 57888864 478999999999999999999986655 89999999999999999999999
Q ss_pred c-cceeeCccccCccchHH----------HHHhhh-c-ccccccCC-----CchhhHHHHhHHhh
Q psy621 86 A-SSFISAPLYTESWLRSF----------VSYVRR-N-QDFLNVTI-----DTREGFLKTLNDLW 132 (289)
Q Consensus 86 ~-~~~~~~~~~~~~Wl~~y----------~~~l~~-~-~~~~n~~~-----~~~~~F~~~l~~~~ 132 (289)
. +|.+|++++.+.|.+++ +.+|.. + ++++|..+ ++++.|.+.++++-
T Consensus 100 ~~~G~ICL~iL~~~WsP~~ti~~iL~s~I~~Ll~~Pn~~~p~n~eaa~~~~~d~~~y~~~vr~~~ 164 (179)
T 2z5d_A 100 EASGTVCLDVINQTWTALYDLTNIFESFLPQLLAYPNPIDPLNGDAAAMYLHRPEEYKQKIKEYI 164 (179)
T ss_dssp TTTCBBCHHHHHHHCCTTCCTTHHHHTHHHHHHHSCCCSSCSCHHHHHHHHHCHHHHHHHHHHHH
T ss_pred CCCCeEeccccccCCCCCCCHHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHCHHHHHHHHHHHH
Confidence 8 99999999988998774 223322 1 33444332 57778888887743
No 96
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.81 E-value=5.9e-20 Score=162.52 Aligned_cols=88 Identities=28% Similarity=0.491 Sum_probs=74.2
Q ss_pred CchHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCC
Q psy621 166 DGNMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPP 245 (289)
Q Consensus 166 ~~~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~ 245 (289)
+....+|+++|++.+.++.+.++... +++.++++|++.|+++|.||+
T Consensus 74 s~~~~kRL~kEl~~L~k~~p~g~~~~---------------------------------i~v~~~ednl~~w~~~I~GP~ 120 (323)
T 3ceg_A 74 SAARARRLAQEAVTLSTSLPLSSSSS---------------------------------VFVRCDEERLDIMKVLITGPA 120 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCCSSCC---------------------------------EEEEEESSCTTEEEEEEEBCT
T ss_pred CHHHHHHHHHHHHHHHhCCCCCcccc---------------------------------eeecccCCCccccEEEEeCCC
Confidence 45677899999999998865432110 111257889999999999999
Q ss_pred CCCCCCCEEEEEEEcCCCCCCCCCeEEEecC-----CcCCCCCCCC
Q psy621 246 DTLYQGGYFKAHMKFPIDYPYSPPTIRFLTK-----VWHPNVYEGT 286 (289)
Q Consensus 246 ~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~-----i~hpnv~~~~ 286 (289)
+|||+||+|+++|.||++||++||+|+|.|+ ||||||+.+|
T Consensus 121 ~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ifHPNV~~~G 166 (323)
T 3ceg_A 121 DTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSVRFNPNLYNDG 166 (323)
T ss_dssp TSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTCCCBTTBCTTC
T ss_pred CCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcccccCCCCcCC
Confidence 9999999999999999999999999999999 9999999765
No 97
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=99.81 E-value=1.5e-20 Score=153.30 Aligned_cols=120 Identities=22% Similarity=0.295 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCcccceecccccccee
Q psy621 8 SALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQIENLTKTFE 85 (289)
Q Consensus 8 ~~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~~~~~~~~~e 85 (289)
++.+||++|+++|++++. ++ . .++|+++|++.|.||++|+|+||.|++.| +++||++||+|+|.++++|||+.
T Consensus 12 ~~~~RL~~El~~l~~~~~-~v--~--~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~ 86 (171)
T 1yf9_A 12 RSNRRREMDYMRLCNSTR-KV--Y--PSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVD 86 (171)
T ss_dssp -CCHHHHHHHHHHHSSSS-CE--E--ECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBC
T ss_pred cHHHHHHHHHHHHHhCCC-CC--C--CCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCc
Confidence 678999999999999884 43 2 36799999999999999999999986655 89999999999999999999999
Q ss_pred -ccceeeCccccCccchHH----------HHHhhh-c-ccccccCC-----CchhhHHHHhHHhh
Q psy621 86 -ASSFISAPLYTESWLRSF----------VSYVRR-N-QDFLNVTI-----DTREGFLKTLNDLW 132 (289)
Q Consensus 86 -~~~~~~~~~~~~~Wl~~y----------~~~l~~-~-~~~~n~~~-----~~~~~F~~~l~~~~ 132 (289)
.+|.+|++++.+.|.+++ +.+|.. + ++++|.++ ++.+.|.+.++++-
T Consensus 87 ~~~G~iCl~iL~~~W~p~~~i~~vL~sil~~ll~~Pn~~~p~n~~aa~~~~~d~~~y~~~vr~~~ 151 (171)
T 1yf9_A 87 ERSGSVCLDVINQTWTPMYQLENIFDVFLPQLLRYPNPSDPLNVQAAHLLHADRVGFDALLREHV 151 (171)
T ss_dssp TTTCBBCHHHHHHHCCTTCCTHHHHHTHHHHHHHSCCSSCCSCHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ccCCeEeccccccCCCCCCcHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHCHHHHHHHHHHHH
Confidence 599999999988998863 234432 1 33444322 57777888877744
No 98
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=99.81 E-value=1.3e-19 Score=160.24 Aligned_cols=100 Identities=19% Similarity=0.249 Sum_probs=89.0
Q ss_pred CCCChHHHHHHHHHHHHhhhCCCCCe----EEEecCCCCceEEEEEEeCCCCCCccCcEEEEEE--cCCCCCCCccccee
Q psy621 3 QVPTSSALRALSMEYKSLQEEPVEGF----RVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKAII--EGELPHWDVNVQNQ 76 (289)
Q Consensus 3 ~~~~~~~~~Rl~kE~~~l~~~~~~g~----~~~~~~~~n~~~w~~~i~gp~~t~y~g~~~~v~v--~~~yp~~~P~v~~~ 76 (289)
+.+++.+.+||+||+++|++++++|+ .+.+ +++|++.|++.|.||++|+|+||.|.+.| +.+||++||+|+|.
T Consensus 71 ~~~s~~~~kRL~kEl~~L~k~~p~g~~~~i~v~~-~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~ 149 (323)
T 3ceg_A 71 DANSAARARRLAQEAVTLSTSLPLSSSSSVFVRC-DEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLE 149 (323)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHCCCCSSCCEEEEE-ESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCCCcccceeecc-cCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEe
Confidence 35788999999999999999988754 4554 67899999999999999999999986655 89999999999999
Q ss_pred cc-----ccccceeccceeeCcccc-------CccchHH
Q psy621 77 IE-----NLTKTFEASSFISAPLYT-------ESWLRSF 103 (289)
Q Consensus 77 ~~-----~~~~~~e~~~~~~~~~~~-------~~Wl~~y 103 (289)
++ ++|||+..+|.+|++++. +.|.+++
T Consensus 150 T~~g~~~ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~ 188 (323)
T 3ceg_A 150 TTGGHSVRFNPNLYNDGKVCLSILNTWHGRPEEKWNPQT 188 (323)
T ss_dssp CSTTTTCCCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTT
T ss_pred ccCCCcccccCCCCcCCeEechhhccccCCCcCCCCcCc
Confidence 98 999999999999999986 6899876
No 99
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=99.80 E-value=1.4e-19 Score=149.58 Aligned_cols=81 Identities=25% Similarity=0.559 Sum_probs=72.3
Q ss_pred chHHHHHHHHHHHHHHhCCCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEeCCCC
Q psy621 167 GNMEKEMVKELRRIAHESSLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIFGPPD 246 (289)
Q Consensus 167 ~~~~~~~~~~~r~ia~~~~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~gp~~ 246 (289)
....+|+++|++++.++.+.++.+. +.++|+++|+++|.||++
T Consensus 13 ~~a~~RL~kEl~~l~~~~~~~i~~~-------------------------------------p~~~nl~~W~~~I~GP~~ 55 (187)
T 2f4w_A 13 TTATQRLKQDYLRIKKDPVPYICAE-------------------------------------PLPSNILEWHYVVRGPEM 55 (187)
T ss_dssp -CHHHHHHHHHHHHHHSCCTTEEEE-------------------------------------EETTEEEEEEEEEECCTT
T ss_pred cHHHHHHHHHHHHHHhCCCCCEEEE-------------------------------------EcCCccceeEEEEeCCCC
Confidence 3456899999999998877676664 567899999999999999
Q ss_pred CCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 247 TLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 247 t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
|||+||+|+++|.||++||++||+|+|.|+ |||++.+|
T Consensus 56 TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~~G 93 (187)
T 2f4w_A 56 TPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKCNT 93 (187)
T ss_dssp STTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCTTS
T ss_pred CCCCCCEEEEEEEcCCCCCCCCCcccccCC--CceeccCC
Confidence 999999999999999999999999999999 89998765
No 100
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.80 E-value=4.5e-20 Score=152.44 Aligned_cols=99 Identities=18% Similarity=0.312 Sum_probs=88.4
Q ss_pred CCChHHHHHHHHHHHHhhhCC---CCCeEEEecCCCCceEEEEEEeCC-CCCCccC-----------cEEEEE--EcCCC
Q psy621 4 VPTSSALRALSMEYKSLQEEP---VEGFRVKLVNDDNLFEWEVAIFGP-PDTLYQG-----------GYFKAI--IEGEL 66 (289)
Q Consensus 4 ~~~~~~~~Rl~kE~~~l~~~~---~~g~~~~~~~~~n~~~w~~~i~gp-~~t~y~g-----------~~~~v~--v~~~y 66 (289)
+|+.++.+||+|||++|++++ +.|+.+.+ .++|+++|.+.|.|| ++|+|+| |.|.+. ++++|
T Consensus 23 ~~s~~a~~RL~kEl~~l~~~~~~~~~~~~~~p-~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~Y 101 (186)
T 1zuo_A 23 SGSVQASDRLMKELRDIYRSQSYKTGIYSVEL-INDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNF 101 (186)
T ss_dssp -CCHHHHHHHHHHHHHHHTSHHHHTTSEEEEE-ETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTT
T ss_pred cccHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-cCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCC
Confidence 678889999999999999998 68899987 557999999999998 8999997 777554 58999
Q ss_pred CCCCcccceecccccc-ceeccceeeCcccc-CccchHH
Q psy621 67 PHWDVNVQNQIENLTK-TFEASSFISAPLYT-ESWLRSF 103 (289)
Q Consensus 67 p~~~P~v~~~~~~~~~-~~e~~~~~~~~~~~-~~Wl~~y 103 (289)
|++||+|+|.++++|| ++..+|.+|++++. +.|.++|
T Consensus 102 P~~PP~V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ 140 (186)
T 1zuo_A 102 PFDPPFVRVVLPVLSGGYVLGGGALCMELLTKQGWSSAY 140 (186)
T ss_dssp TSSCCEEEEEESCEESTTBCGGGBBCCGGGSTTTCCTTS
T ss_pred CCCCCeEEEeCCccCCCccCCCCcEEeccCCCCCCCCcC
Confidence 9999999999999999 69999999999996 7899886
No 101
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=99.79 E-value=2.7e-19 Score=148.37 Aligned_cols=57 Identities=26% Similarity=0.491 Sum_probs=53.5
Q ss_pred cCCCCcc---eEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCCcCCCCCCCC
Q psy621 229 VNDDNLF---EWEVAIFGPPDTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKVWHPNVYEGT 286 (289)
Q Consensus 229 ~~~~~~~---~w~~~i~gp~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i~hpnv~~~~ 286 (289)
++++|++ +|+++|. |++|||+||+|+++|.||++||++||+|+|.|+||||||+.+|
T Consensus 55 p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~~G 114 (190)
T 3o2u_A 55 PDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIFHPNIDLKG 114 (190)
T ss_dssp TTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCCCTTBCTTS
T ss_pred CCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcccCCCCCCC
Confidence 5788999 9999996 8889999999999999999999999999999999999999754
No 102
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=99.77 E-value=1.3e-19 Score=149.73 Aligned_cols=84 Identities=26% Similarity=0.482 Sum_probs=72.6
Q ss_pred CchHHHHHHHHHHHHHHhC---CCCeEeeccccccccchhhhcchhhhhhhhhceeeeEEeeeccccCCCCcceEEEEEe
Q psy621 166 DGNMEKEMVKELRRIAHES---SLNVSVFHPYFVFFDQFELVRPTTIQSMLGGSVTMMFIRFRVKLVNDDNLFEWEVAIF 242 (289)
Q Consensus 166 ~~~~~~~~~~~~r~ia~~~---~~~~~~~~~~~~~~DQ~~~i~~~tiq~~~~a~~~m~~v~~~~i~~~~~~~~~w~~~i~ 242 (289)
+....+|+++|++++.++. ...+.+. +.++|+++|+++|.
T Consensus 25 s~~a~~RL~kEl~~l~~~~~~~~~~~~~~-------------------------------------p~~dnl~~W~~~I~ 67 (186)
T 1zuo_A 25 SVQASDRLMKELRDIYRSQSYKTGIYSVE-------------------------------------LINDSLYDWHVKLQ 67 (186)
T ss_dssp CHHHHHHHHHHHHHHHTSHHHHTTSEEEE-------------------------------------EETTEEEEEEEEEC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCcEEEE-------------------------------------EcCCccceeEEEEE
Confidence 3456789999999998875 3445543 46789999999999
Q ss_pred CC-CCCCCCC-----------CEEEEEEEcCCCCCCCCCeEEEecCCcCC-CCCCCC
Q psy621 243 GP-PDTLYQG-----------GYFKAHMKFPIDYPYSPPTIRFLTKVWHP-NVYEGT 286 (289)
Q Consensus 243 gp-~~t~y~~-----------g~~~~~i~~~~~yP~~pP~v~f~t~i~hp-nv~~~~ 286 (289)
|| ++|||+| |.|+++|.||++||++||+|+|.|++||| ||+.+|
T Consensus 68 Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~V~f~tpi~hPnnV~~~G 124 (186)
T 1zuo_A 68 KVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPFVRVVLPVLSGGYVLGGG 124 (186)
T ss_dssp CCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCEEEEEESCEESTTBCGGG
T ss_pred CCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCCeEEEeCCccCCCccCCCC
Confidence 98 8999998 89999999999999999999999999999 698654
No 103
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.65 E-value=5e-17 Score=128.63 Aligned_cols=58 Identities=22% Similarity=0.335 Sum_probs=54.8
Q ss_pred cCCCCcceEEEEEeCCCCCCCCCC----------EEEEEEEcCCCCCCCCCeEEEecC-CcCCCCCCCC
Q psy621 229 VNDDNLFEWEVAIFGPPDTLYQGG----------YFKAHMKFPIDYPYSPPTIRFLTK-VWHPNVYEGT 286 (289)
Q Consensus 229 ~~~~~~~~w~~~i~gp~~t~y~~g----------~~~~~i~~~~~yP~~pP~v~f~t~-i~hpnv~~~~ 286 (289)
++++|+.+|.+++.||++|+|+|| .|.+++.||++||.+||+|+|.++ +||||||.+|
T Consensus 50 p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~~~~hpnmY~~G 118 (172)
T 2z6o_A 50 NNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGG 118 (172)
T ss_dssp HHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSBCTTS
T ss_pred cCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCCCCCCCCCCCCC
Confidence 466799999999999999999999 999999999999999999999998 9999999865
No 104
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.49 E-value=2e-15 Score=119.52 Aligned_cols=79 Identities=18% Similarity=0.084 Sum_probs=70.2
Q ss_pred HHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCc----------EEEEEE--cCCCCCCCcccceec
Q psy621 10 LRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGG----------YFKAII--EGELPHWDVNVQNQI 77 (289)
Q Consensus 10 ~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~----------~~~v~v--~~~yp~~~P~v~~~~ 77 (289)
.+||++|+++|++. +.+ +.+|+.+|.+.+.||++|+|+|| .|.|.+ +++||.+||+++|..
T Consensus 34 ~~RL~eE~k~L~k~------v~p-~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~ 106 (172)
T 2z6o_A 34 VQRLKEEYQSLIRY------VEN-NKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPE 106 (172)
T ss_dssp HHHHHHHHHHHHHH------HHH-HHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGG
T ss_pred HHHHHHHHHHHHHH------hcc-CccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCC
Confidence 99999999999993 333 45688899999999999999998 776655 899999999999988
Q ss_pred c-ccccceeccceeeCccc
Q psy621 78 E-NLTKTFEASSFISAPLY 95 (289)
Q Consensus 78 ~-~~~~~~e~~~~~~~~~~ 95 (289)
. .+|+++..+|.+|+++.
T Consensus 107 ~~~~hpnmY~~G~ICLdIL 125 (172)
T 2z6o_A 107 LDGKTAKMYRGGKICLTDH 125 (172)
T ss_dssp GTTTCSSBCTTSBBCCCTT
T ss_pred CCCCCCCCCCCCcEechhh
Confidence 7 99999999999999986
No 105
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.06 E-value=5e-11 Score=92.05 Aligned_cols=55 Identities=24% Similarity=0.424 Sum_probs=50.3
Q ss_pred CCcceEEEEEeCCCCCCCCCC----------EEEEEEEcCCCCCCCCCeEEEecC-CcCCCCCCCC
Q psy621 232 DNLFEWEVAIFGPPDTLYQGG----------YFKAHMKFPIDYPYSPPTIRFLTK-VWHPNVYEGT 286 (289)
Q Consensus 232 ~~~~~w~~~i~gp~~t~y~~g----------~~~~~i~~~~~yP~~pP~v~f~t~-i~hpnv~~~~ 286 (289)
++=..|...+.||+||+|.|+ .|.+++.||.+||..||+|+|.+. ++|||+|.+|
T Consensus 55 ~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~ldgkt~kmYr~G 120 (168)
T 3kpa_A 55 ASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPELEGKTVKMYRGG 120 (168)
T ss_dssp HTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGGTTTCSSEETTT
T ss_pred cccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccccCcCccccCCC
Confidence 344579999999999999999 999999999999999999999995 8999998765
No 106
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=98.89 E-value=2.2e-09 Score=85.77 Aligned_cols=60 Identities=20% Similarity=0.190 Sum_probs=47.5
Q ss_pred CCCCcceEEEEEeCCCCCCCCCCE---EEEEEEcCCCCCCCCCeEEEec-------C---Cc-CCCCCCCCCcC
Q psy621 230 NDDNLFEWEVAIFGPPDTLYQGGY---FKAHMKFPIDYPYSPPTIRFLT-------K---VW-HPNVYEGTAQY 289 (289)
Q Consensus 230 ~~~~~~~w~~~i~gp~~t~y~~g~---~~~~i~~~~~yP~~pP~v~f~t-------~---i~-hpnv~~~~~~~ 289 (289)
.++...++-+.+.|+-.++|+||. |.+.|.||.+||++||.|.|.+ + |+ ||||+++|-.|
T Consensus 56 ~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~~~~~~I~~hpnVD~~G~I~ 129 (162)
T 3r3q_A 56 HSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMNTISSSLPIQEYIDSNGWIA 129 (162)
T ss_dssp CTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTTTSCTTSTHHHHBCTTSBBC
T ss_pred cCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCccccccccccCCCCCCCCCCcEe
Confidence 344555555666666669999999 8899999999999999998865 1 77 99999988654
No 107
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=98.80 E-value=7.6e-09 Score=79.93 Aligned_cols=87 Identities=16% Similarity=0.110 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCc----------EEEEEE--cCCCCCCCccccee
Q psy621 9 ALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGG----------YFKAII--EGELPHWDVNVQNQ 76 (289)
Q Consensus 9 ~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~----------~~~v~v--~~~yp~~~P~v~~~ 76 (289)
=..||+.||+.|-+-- ...-..|+ +|...+.||++|.|.|+ .|++.+ |..||..||+++|.
T Consensus 35 w~~RlkeEy~alI~yv----~~nK~~d~---dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp 107 (168)
T 3kpa_A 35 WTARLKEEYASLITYV----EHNKASDS---HWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALP 107 (168)
T ss_dssp HHHHHHHHHHHHHHHH----HHHHHTTC---CCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCG
T ss_pred HHHHHHHHHHHHHHHH----HhcccccC---CeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecc
Confidence 4689999999885420 00002333 49999999999999998 555544 89999999999999
Q ss_pred cc-ccccceeccceeeCccccCccchHHHH
Q psy621 77 IE-NLTKTFEASSFISAPLYTESWLRSFVS 105 (289)
Q Consensus 77 ~~-~~~~~~e~~~~~~~~~~~~~Wl~~y~~ 105 (289)
.. ..|+++..+|.+|+++ .|.+.+.+
T Consensus 108 ~ldgkt~kmYr~GkICLdI---hwkPlW~~ 134 (168)
T 3kpa_A 108 ELEGKTVKMYRGGKICMTT---HFFPLWAR 134 (168)
T ss_dssp GGTTTCSSEETTTEECCCT---THHHHHHH
T ss_pred cccCcCccccCCCcEEecc---ccchhhHh
Confidence 85 7999999999999997 59988864
No 108
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=98.50 E-value=1.9e-07 Score=73.35 Aligned_cols=55 Identities=22% Similarity=0.372 Sum_probs=47.8
Q ss_pred CCCCcceEEEEEeCCCCCCCCCCEEEE--EEEcCCCCCCCCCeEEEecC------CcCCCCCCCCCcC
Q psy621 230 NDDNLFEWEVAIFGPPDTLYQGGYFKA--HMKFPIDYPYSPPTIRFLTK------VWHPNVYEGTAQY 289 (289)
Q Consensus 230 ~~~~~~~w~~~i~gp~~t~y~~g~~~~--~i~~~~~yP~~pP~v~f~t~------i~hpnv~~~~~~~ 289 (289)
...++..|.++|. .+|+|+.|.+ .|-||++||.+||.| |.++ ..||||+++|-.|
T Consensus 49 ~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~ 111 (146)
T 3obq_A 49 GSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIY 111 (146)
T ss_dssp TTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBC
T ss_pred ChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEe
Confidence 3468999999996 7899999995 888999999999999 7777 5899999988654
No 109
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=97.89 E-value=3e-05 Score=61.84 Aligned_cols=90 Identities=16% Similarity=0.252 Sum_probs=67.2
Q ss_pred HHHHHHHHHHhhhCCCCCeEEE---ecCCCCceEEEEEEeCCCCCCccCcE---EEEEE--cCCCCCCCcccceecc---
Q psy621 10 LRALSMEYKSLQEEPVEGFRVK---LVNDDNLFEWEVAIFGPPDTLYQGGY---FKAII--EGELPHWDVNVQNQIE--- 78 (289)
Q Consensus 10 ~~Rl~kE~~~l~~~~~~g~~~~---~~~~~n~~~w~~~i~gp~~t~y~g~~---~~v~v--~~~yp~~~P~v~~~~~--- 78 (289)
.+|..+|+.++.+. -+++..+ -..+|...++.+.+.|....+|+|+. |.|.+ +++||++||.+.+...
T Consensus 30 ~~~~~~dv~~~l~~-yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~ 108 (162)
T 3r3q_A 30 GRTTFHDSLALLDN-FHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFD 108 (162)
T ss_dssp HHHHHHHHHHHHHH-CTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCC
T ss_pred hhHHHHHHHHHHHh-CCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcc
Confidence 36777888877652 2334433 13556677888889999889999976 54544 8999999999988651
Q ss_pred -------cc-ccceeccceeeCccccCccch
Q psy621 79 -------NL-TKTFEASSFISAPLYTESWLR 101 (289)
Q Consensus 79 -------~~-~~~~e~~~~~~~~~~~~~Wl~ 101 (289)
+. |++++.+|.+|++.+ +.|.+
T Consensus 109 m~~~~~~I~~hpnVD~~G~I~lpyL-~~W~p 138 (162)
T 3r3q_A 109 MNTISSSLPIQEYIDSNGWIALPIL-HAWDP 138 (162)
T ss_dssp TTTSCTTSTHHHHBCTTSBBCCGGG-GSCCG
T ss_pred ccccccccCCCCCCCCCCcEeCccc-ccCCC
Confidence 44 999999999999998 45877
No 110
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=96.32 E-value=0.0035 Score=48.96 Aligned_cols=60 Identities=18% Similarity=0.214 Sum_probs=47.0
Q ss_pred CCceEEEEEEeCCCCCCccCcEEEE--E--EcCCCCCCCcccceecc------ccccceeccceeeCccccCccch
Q psy621 36 DNLFEWEVAIFGPPDTLYQGGYFKA--I--IEGELPHWDVNVQNQIE------NLTKTFEASSFISAPLYTESWLR 101 (289)
Q Consensus 36 ~n~~~w~~~i~gp~~t~y~g~~~~v--~--v~~~yp~~~P~v~~~~~------~~~~~~e~~~~~~~~~~~~~Wl~ 101 (289)
.++..|...|- ..|+|..|.+ . ++++||+.||.+ +... ..|++++.+|.+|.+.+.+ |.+
T Consensus 51 ~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I~~~~~Vd~~G~i~lpyL~~-W~~ 120 (146)
T 3obq_A 51 RELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTIKTGKHVDANGKIYLPYLHE-WKH 120 (146)
T ss_dssp CEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEECCBTTBCTTCBBCCHHHHT-CCT
T ss_pred heEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEECCCCCCCCCCCEecccccc-cCC
Confidence 47888888887 6788887754 3 389999999998 4433 4689999999999998744 865
No 111
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=90.60 E-value=0.41 Score=35.95 Aligned_cols=24 Identities=13% Similarity=0.292 Sum_probs=21.4
Q ss_pred CEEEEEEEcCCCCCCCCCeEEEec
Q psy621 252 GYFKAHMKFPIDYPYSPPTIRFLT 275 (289)
Q Consensus 252 g~~~~~i~~~~~yP~~pP~v~f~t 275 (289)
-.+.+.+.+|++||..||.+...+
T Consensus 55 ~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 55 VQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp CBEEEEEECCSSTTTSCCEEEEEE
T ss_pred eeEEEEEEeCCCCCCCCceEEEEc
Confidence 368899999999999999998765
No 112
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=89.38 E-value=1.1 Score=34.03 Aligned_cols=42 Identities=19% Similarity=0.316 Sum_probs=29.1
Q ss_pred cceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecC
Q psy621 234 LFEWEVAIFGPPDTLYQGGYFKAHMKFPIDYPYSPPTIRFLTK 276 (289)
Q Consensus 234 ~~~w~~~i~gp~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~ 276 (289)
...+.+.|.+..+ .-..-...+.+.+|++||..||.|...+.
T Consensus 45 ~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 86 (138)
T 2yz0_A 45 QIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV 86 (138)
T ss_dssp CSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred CcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence 3456666653222 11234788999999999999999998653
No 113
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=88.36 E-value=1.3 Score=33.17 Aligned_cols=25 Identities=24% Similarity=0.477 Sum_probs=21.9
Q ss_pred CEEEEEEEcCCCCCCCCCeEEEecC
Q psy621 252 GYFKAHMKFPIDYPYSPPTIRFLTK 276 (289)
Q Consensus 252 g~~~~~i~~~~~yP~~pP~v~f~t~ 276 (289)
-.+.|.+.+|++||..+|.+...+.
T Consensus 59 ~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 59 VCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp CEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred eeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 4788999999999999999987763
No 114
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=83.63 E-value=1.8 Score=32.33 Aligned_cols=41 Identities=12% Similarity=0.123 Sum_probs=28.0
Q ss_pred cceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEec
Q psy621 234 LFEWEVAIFGPPDTLYQGGYFKAHMKFPIDYPYSPPTIRFLT 275 (289)
Q Consensus 234 ~~~w~~~i~gp~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t 275 (289)
...+.+.|...... =..-.+.+.+.+|++||..||.+...+
T Consensus 39 ~~~f~i~l~~~~~~-~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 39 GTVFRIHTKAEGFM-DADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp CEEEEEEEECCTTT-TCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred CCeEEEEecCCCCC-CCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 45666666432211 012378999999999999999987654
No 115
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=81.73 E-value=0.77 Score=34.79 Aligned_cols=23 Identities=26% Similarity=0.372 Sum_probs=20.5
Q ss_pred CEEEEEEEcCCCCCCCCCeEEEe
Q psy621 252 GYFKAHMKFPIDYPYSPPTIRFL 274 (289)
Q Consensus 252 g~~~~~i~~~~~yP~~pP~v~f~ 274 (289)
-.+.|.+.+|++||..||.|...
T Consensus 63 ~~~~L~v~~p~~YP~~~P~i~l~ 85 (137)
T 1ukx_A 63 VQVELRVKCPPTYPDVVPEIDLK 85 (137)
T ss_dssp CEEEEEECCCTTTTSSCCCCEEE
T ss_pred eEEEEEEECCCCCCCCCCcEEEe
Confidence 36899999999999999999874
No 116
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=79.51 E-value=1.2 Score=34.44 Aligned_cols=24 Identities=25% Similarity=0.444 Sum_probs=21.3
Q ss_pred EEEEEEEcCCCCCCCCCeEEEecC
Q psy621 253 YFKAHMKFPIDYPYSPPTIRFLTK 276 (289)
Q Consensus 253 ~~~~~i~~~~~yP~~pP~v~f~t~ 276 (289)
.+.+.+.+|.+||..||.+.....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 588999999999999999987764
No 117
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=78.62 E-value=1.9 Score=33.45 Aligned_cols=24 Identities=17% Similarity=0.300 Sum_probs=21.7
Q ss_pred EEEEEEEcCCCCCCCCCeEEEecC
Q psy621 253 YFKAHMKFPIDYPYSPPTIRFLTK 276 (289)
Q Consensus 253 ~~~~~i~~~~~yP~~pP~v~f~t~ 276 (289)
.+.+++.+|.+||..||.+...+.
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 799999999999999999987764
No 118
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=61.30 E-value=8.7 Score=19.40 Aligned_cols=22 Identities=32% Similarity=0.487 Sum_probs=18.6
Q ss_pred hHHHHHHHHHHHHhhhCCCCCe
Q psy621 7 SSALRALSMEYKSLQEEPVEGF 28 (289)
Q Consensus 7 ~~~~~Rl~kE~~~l~~~~~~g~ 28 (289)
-+-..||.-|+...+.+|+.|.
T Consensus 4 lseldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 4 LSELDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHHHHhhhccCCCCCC
Confidence 3567899999999999999874
No 119
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=35.94 E-value=35 Score=27.27 Aligned_cols=42 Identities=17% Similarity=0.159 Sum_probs=33.6
Q ss_pred CCCcceEEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCeEEEecCC
Q psy621 231 DDNLFEWEVAIFGPPDTLYQGGYFKAHMKFPIDYPYSPPTIRFLTKV 277 (289)
Q Consensus 231 ~~~~~~w~~~i~gp~~t~y~~g~~~~~i~~~~~yP~~pP~v~f~t~i 277 (289)
++++...++.+..-. |....+++.++.+||.+||.+.-.-|+
T Consensus 22 d~~~~~i~l~~~D~~-----gR~H~l~v~l~~~yp~~~P~~~~DlP~ 63 (186)
T 3zqs_A 22 DTCFSTIKLKAEDAS-----GREHLITLKLKAKYPAESPDYFVDFPV 63 (186)
T ss_dssp CTTSSEEEEEEECTT-----SCEEEEEEECCTTTTTSCCEEECCCSS
T ss_pred cCCccEEEEEEEeCC-----CCeEEEEEEECCCCCCCCCeeEEcCCC
Confidence 357888888886543 578999999999999999988766554
No 120
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=34.39 E-value=93 Score=20.05 Aligned_cols=61 Identities=25% Similarity=0.434 Sum_probs=39.8
Q ss_pred CchhhHHHHhHHhhccCCCCCccceEEcCCCCeEEEEEEEEEEEecCCchHHHHHHHHHHHHHHhCCC
Q psy621 119 DTREGFLKTLNDLWLFKPNPFSLDIKFNDDGTKIIASRFMIQAVNITDGNMEKEMVKELRRIAHESSL 186 (289)
Q Consensus 119 ~~~~~F~~~l~~~~~~~~~~~~~di~~~~~~~~i~asrf~~~~~~~~~~~~~~~~~~~~r~ia~~~~~ 186 (289)
+|-+.|.+.|++ +......|.+.+.+.-+|+.++- ....+. ..-++.+.++..++|++...
T Consensus 10 ddleafekalke-mirqarkfagtvtytldgndlei-----ritgvp-eqvrkelakeaerlakefni 70 (85)
T 2kl8_A 10 DDLEAFEKALKE-MIRQARKFAGTVTYTLDGNDLEI-----RITGVP-EQVRKELAKEAERLAKEFNI 70 (85)
T ss_dssp SSHHHHHHHHHH-HHHHHTTTTCEEEEEECSSCEEE-----EEESCC-HHHHHHHHHHHHHHHHHTCC
T ss_pred CcHHHHHHHHHH-HHHHHHhhcceEEEEecCCeeEE-----EEecCh-HHHHHHHHHHHHHHHHhcCe
Confidence 567889998888 44444578888877655554422 122333 34457889999999998543
No 121
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.24 E-value=1.8e+02 Score=20.83 Aligned_cols=64 Identities=11% Similarity=0.020 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHhhhCCCCCeEEEecCCCCceEEEEEEeCCCCCCccCcE--EEEEEcCCCCCCCcccce
Q psy621 9 ALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGY--FKAIIEGELPHWDVNVQN 75 (289)
Q Consensus 9 ~~~Rl~kE~~~l~~~~~~g~~~~~~~~~n~~~w~~~i~gp~~t~y~g~~--~~v~v~~~yp~~~P~v~~ 75 (289)
...+...|+..|+.-=++.+.+. .+ .-..+.+.+....+..-+.-. ..+.++..||..+|.+..
T Consensus 11 ~~e~q~~EleaL~sIy~d~~~~~--~~-~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l 76 (128)
T 2ebm_A 11 YGEEQRNELEALESIYPDSFTVL--SE-NPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEI 76 (128)
T ss_dssp HHHHHHHHHHHHHHHCSSSEEEC--CS-SSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEE
T ss_pred hHHHHHHHHHHHHHHccCceEEc--cC-CCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEE
Confidence 45677889999987555556542 22 123566655522211111223 455558999999998653
No 122
>4dac_A Computationally designed crystal forming protein; alpha-helix, three-helix bundle, coiled-coil protein, DE NOV computational protein design; 2.10A {Synthetic}
Probab=22.55 E-value=72 Score=16.29 Aligned_cols=15 Identities=20% Similarity=0.310 Sum_probs=11.9
Q ss_pred HHHHHHHHHHHHhhh
Q psy621 8 SALRALSMEYKSLQE 22 (289)
Q Consensus 8 ~~~~Rl~kE~~~l~~ 22 (289)
...+||.||.-++.-
T Consensus 8 anvkrlekevgkleg 22 (28)
T 4dac_A 8 ANVKRLEKEVGKLEG 22 (28)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHhhhhh
Confidence 457999999988763
No 123
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=21.97 E-value=70 Score=25.95 Aligned_cols=26 Identities=19% Similarity=0.351 Sum_probs=22.8
Q ss_pred CCCEEEEEEEcCCCCCC-----CCCeEEEec
Q psy621 250 QGGYFKAHMKFPIDYPY-----SPPTIRFLT 275 (289)
Q Consensus 250 ~~g~~~~~i~~~~~yP~-----~pP~v~f~t 275 (289)
+.|.|.|+-..|--||. .||.|.|.-
T Consensus 109 ~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V 139 (209)
T 2bum_A 109 GTGFWSFNTIKPGAVPGRKGSTQAPHISLII 139 (209)
T ss_dssp TTCCEEEEEECCCCCBCSTTCBCCCCEEEEE
T ss_pred CCcEEEEEEEccCcccCCCCCccCcEEEEEE
Confidence 46899999999999998 899999863
Done!