Query psy6213
Match_columns 330
No_of_seqs 778 out of 1633
Neff 11.7
Searched_HMMs 29240
Date Fri Aug 16 20:37:16 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6213.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6213hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 2.9E-52 9.9E-57 354.4 36.9 282 2-301 106-409 (410)
2 3ow8_A WD repeat-containing pr 100.0 2.2E-51 7.6E-56 337.6 37.2 284 2-301 30-319 (321)
3 1got_B GT-beta; complex (GTP-b 100.0 1.1E-50 3.9E-55 336.5 39.9 283 2-300 53-340 (340)
4 4gqb_B Methylosome protein 50; 100.0 2.8E-51 9.5E-56 339.5 32.0 294 2-303 28-331 (344)
5 2pbi_B Guanine nucleotide-bind 100.0 9.6E-50 3.3E-54 332.4 38.8 284 2-300 62-354 (354)
6 2ynn_A Coatomer subunit beta'; 100.0 1.6E-49 5.4E-54 324.5 38.0 282 2-300 11-299 (304)
7 3iz6_a 40S ribosomal protein R 100.0 1.1E-50 3.9E-55 341.4 30.7 289 2-302 64-374 (380)
8 4g56_B MGC81050 protein; prote 100.0 2.4E-49 8.3E-54 330.3 32.8 291 2-303 40-343 (357)
9 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.6E-48 5.6E-53 324.1 36.8 291 2-303 13-335 (345)
10 1erj_A Transcriptional repress 100.0 3.3E-48 1.1E-52 327.9 37.5 290 2-303 62-389 (393)
11 2xzm_R RACK1; ribosome, transl 100.0 1.6E-47 5.4E-52 318.0 38.6 289 2-302 19-339 (343)
12 4ery_A WD repeat-containing pr 100.0 9.8E-48 3.4E-52 315.3 36.4 283 2-301 21-310 (312)
13 3frx_A Guanine nucleotide-bind 100.0 3.1E-47 1E-51 313.0 37.6 286 2-302 15-316 (319)
14 2hes_X YDR267CP; beta-propelle 100.0 1.1E-46 3.6E-51 311.3 34.9 289 2-302 12-327 (330)
15 1nr0_A Actin interacting prote 100.0 2.9E-46 1E-50 333.0 36.6 292 2-301 188-609 (611)
16 1nr0_A Actin interacting prote 100.0 2.5E-46 8.7E-51 333.4 36.2 284 3-302 17-354 (611)
17 4gqb_B Methylosome protein 50; 100.0 1.4E-45 4.7E-50 305.4 32.2 250 3-263 81-334 (344)
18 3zwl_B Eukaryotic translation 100.0 2.2E-44 7.4E-49 301.8 39.6 283 2-303 30-346 (369)
19 1gxr_A ESG1, transducin-like e 100.0 3.8E-44 1.3E-48 296.7 39.4 286 2-301 49-335 (337)
20 2ynn_A Coatomer subunit beta'; 100.0 2.2E-44 7.4E-49 294.1 35.9 240 53-302 15-258 (304)
21 2ymu_A WD-40 repeat protein; u 100.0 1.4E-44 4.8E-49 320.8 37.4 275 2-300 301-577 (577)
22 2pm9_A Protein WEB1, protein t 100.0 6.4E-46 2.2E-50 316.4 26.6 292 2-302 65-413 (416)
23 4aow_A Guanine nucleotide-bind 100.0 6.9E-44 2.4E-48 295.7 37.6 288 2-302 36-336 (340)
24 3k26_A Polycomb protein EED; W 100.0 5.4E-45 1.8E-49 305.3 30.9 288 2-302 16-365 (366)
25 3i2n_A WD repeat-containing pr 100.0 2.6E-44 8.8E-49 300.2 33.8 286 2-303 16-353 (357)
26 3ei3_B DNA damage-binding prot 100.0 7.9E-44 2.7E-48 300.3 36.4 282 2-302 71-381 (383)
27 1sq9_A Antiviral protein SKI8; 100.0 4E-44 1.4E-48 303.5 34.1 280 2-302 14-394 (397)
28 3dm0_A Maltose-binding peripla 100.0 5.3E-44 1.8E-48 323.3 36.9 287 2-302 380-692 (694)
29 4e54_B DNA damage-binding prot 100.0 3.8E-45 1.3E-49 313.3 27.6 289 3-302 118-429 (435)
30 1k8k_C P40, ARP2/3 complex 41 100.0 1.2E-43 4E-48 297.9 35.3 286 2-302 6-360 (372)
31 1vyh_C Platelet-activating fac 100.0 1.4E-43 4.7E-48 301.1 32.9 242 50-302 107-368 (410)
32 3ow8_A WD repeat-containing pr 100.0 1.9E-43 6.6E-48 290.4 32.3 241 2-259 78-320 (321)
33 3dwl_C Actin-related protein 2 100.0 1.1E-44 3.9E-49 304.8 25.1 283 3-300 10-376 (377)
34 3odt_A Protein DOA1; ubiquitin 100.0 2E-42 6.8E-47 283.6 37.7 277 2-303 16-296 (313)
35 2pm9_A Protein WEB1, protein t 100.0 6.3E-44 2.2E-48 304.1 29.7 290 3-303 11-337 (416)
36 1r5m_A SIR4-interacting protei 100.0 4.6E-43 1.6E-47 299.3 35.0 286 3-302 44-360 (425)
37 2ymu_A WD-40 repeat protein; u 100.0 1.3E-42 4.3E-47 308.2 38.8 277 2-302 260-538 (577)
38 3vl1_A 26S proteasome regulato 100.0 1.2E-43 4.1E-48 302.8 30.3 280 6-303 58-365 (420)
39 1r5m_A SIR4-interacting protei 100.0 4.9E-43 1.7E-47 299.1 33.8 279 3-301 107-423 (425)
40 4gga_A P55CDC, cell division c 100.0 4.3E-42 1.5E-46 293.1 39.2 281 7-304 108-396 (420)
41 4a11_B DNA excision repair pro 100.0 5.5E-42 1.9E-46 291.2 38.1 293 2-302 41-364 (408)
42 1gxr_A ESG1, transducin-like e 100.0 2.6E-42 8.9E-47 285.8 34.2 282 3-302 8-295 (337)
43 4aez_A CDC20, WD repeat-contai 100.0 6.5E-42 2.2E-46 290.3 36.0 279 7-303 96-380 (401)
44 4g56_B MGC81050 protein; prote 100.0 6.5E-43 2.2E-47 291.4 29.0 250 2-263 92-346 (357)
45 4ggc_A P55CDC, cell division c 100.0 2.2E-41 7.5E-46 278.1 37.2 280 7-303 28-315 (318)
46 2j04_B YDR362CP, TAU91; beta p 100.0 5.3E-43 1.8E-47 303.8 27.8 294 3-305 132-519 (524)
47 3gre_A Serine/threonine-protei 100.0 2.9E-43 1E-47 302.0 25.5 284 2-300 61-437 (437)
48 2pm7_B Protein transport prote 100.0 1.3E-41 4.5E-46 276.7 33.9 247 51-302 9-284 (297)
49 4h5i_A Guanine nucleotide-exch 100.0 6.7E-43 2.3E-47 292.1 25.6 289 5-304 15-344 (365)
50 3dw8_B Serine/threonine-protei 100.0 1.4E-41 4.8E-46 292.3 32.7 289 2-300 26-443 (447)
51 1got_B GT-beta; complex (GTP-b 100.0 6E-41 2.1E-45 278.1 34.0 241 50-302 54-300 (340)
52 3vl1_A 26S proteasome regulato 100.0 3E-41 1E-45 287.9 32.5 281 5-302 98-418 (420)
53 3mkq_A Coatomer beta'-subunit; 100.0 5.2E-41 1.8E-45 309.2 34.4 282 2-301 11-300 (814)
54 1yfq_A Cell cycle arrest prote 100.0 4.8E-41 1.7E-45 278.9 30.9 278 2-300 9-321 (342)
55 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.2E-40 4.1E-45 276.7 32.7 252 2-263 59-338 (345)
56 3bg1_A Protein SEC13 homolog; 100.0 1.4E-41 4.7E-46 279.0 25.8 246 51-302 13-292 (316)
57 2pm7_B Protein transport prote 100.0 2.5E-40 8.6E-45 269.2 31.7 249 2-261 7-286 (297)
58 3frx_A Guanine nucleotide-bind 100.0 8E-40 2.7E-44 268.9 32.9 244 49-302 15-266 (319)
59 4ery_A WD repeat-containing pr 100.0 8.8E-40 3E-44 268.0 32.4 242 50-302 22-267 (312)
60 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.4E-39 4.9E-44 280.0 34.5 290 1-301 1-389 (450)
61 3iz6_a 40S ribosomal protein R 100.0 8.7E-41 3E-45 281.2 25.9 262 24-302 46-328 (380)
62 2hes_X YDR267CP; beta-propelle 100.0 1.6E-39 5.6E-44 268.3 32.9 241 52-302 15-279 (330)
63 2pbi_B Guanine nucleotide-bind 100.0 2.4E-39 8.1E-44 269.8 34.1 243 49-302 62-314 (354)
64 3sfz_A APAF-1, apoptotic pepti 100.0 8E-40 2.7E-44 313.7 35.7 283 2-302 613-912 (1249)
65 2aq5_A Coronin-1A; WD40 repeat 100.0 2.9E-40 9.9E-45 280.3 28.7 286 7-302 37-341 (402)
66 3v7d_B Cell division control p 100.0 7.5E-39 2.6E-43 276.7 37.9 275 2-302 119-420 (464)
67 2xyi_A Probable histone-bindin 100.0 2.2E-39 7.5E-44 277.1 32.3 257 48-306 125-413 (430)
68 3bg1_A Protein SEC13 homolog; 100.0 4.5E-40 1.5E-44 270.0 26.7 248 2-260 11-293 (316)
69 3f3f_A Nucleoporin SEH1; struc 100.0 1.7E-39 5.9E-44 269.8 30.6 295 2-302 9-336 (351)
70 1pgu_A Actin interacting prote 100.0 3.9E-39 1.3E-43 287.7 34.3 284 2-302 16-327 (615)
71 1p22_A F-BOX/WD-repeat protein 100.0 3.8E-39 1.3E-43 276.2 32.6 272 2-304 131-415 (435)
72 1pgu_A Actin interacting prote 100.0 1.2E-38 4E-43 284.6 37.0 284 2-302 158-613 (615)
73 1erj_A Transcriptional repress 100.0 1.2E-38 4.1E-43 269.4 34.3 241 50-302 63-340 (393)
74 3sfz_A APAF-1, apoptotic pepti 100.0 4.3E-39 1.5E-43 308.7 35.1 284 2-302 655-1033(1249)
75 3mmy_A MRNA export factor; mRN 100.0 9.4E-39 3.2E-43 267.5 32.6 278 2-300 37-343 (368)
76 3v7d_B Cell division control p 100.0 1.6E-38 5.6E-43 274.5 34.8 278 2-299 160-459 (464)
77 2oaj_A Protein SNI1; WD40 repe 100.0 2.1E-39 7.2E-44 299.0 30.9 290 3-302 97-604 (902)
78 2xzm_R RACK1; ribosome, transl 100.0 3.3E-38 1.1E-42 261.9 34.8 244 50-302 20-284 (343)
79 3jrp_A Fusion protein of prote 100.0 1.2E-38 4.1E-43 267.9 30.6 245 52-302 12-286 (379)
80 2oaj_A Protein SNI1; WD40 repe 100.0 4.8E-39 1.6E-43 296.6 29.6 227 2-245 15-294 (902)
81 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.7E-37 9.3E-42 265.5 38.4 270 2-302 116-390 (445)
82 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.6E-37 5.4E-42 267.0 36.9 271 2-302 157-441 (445)
83 3dwl_C Actin-related protein 2 100.0 1.2E-39 4E-44 274.3 22.5 238 53-301 13-279 (377)
84 3mkq_A Coatomer beta'-subunit; 100.0 4.7E-38 1.6E-42 289.6 35.1 285 2-302 53-385 (814)
85 2j04_B YDR362CP, TAU91; beta p 100.0 5.9E-39 2E-43 278.4 24.9 247 50-303 132-428 (524)
86 1k8k_C P40, ARP2/3 complex 41 100.0 2.1E-37 7.3E-42 259.8 33.2 241 52-303 9-274 (372)
87 3jrp_A Fusion protein of prote 100.0 5.1E-38 1.7E-42 264.1 29.2 247 2-262 9-289 (379)
88 2xyi_A Probable histone-bindin 100.0 6E-38 2E-42 268.2 29.1 250 2-261 126-411 (430)
89 3vu4_A KMHSV2; beta-propeller 100.0 2.6E-37 9E-42 257.5 32.2 274 2-302 17-335 (355)
90 4aez_A CDC20, WD repeat-contai 100.0 1.1E-37 3.7E-42 264.4 29.3 244 2-263 132-383 (401)
91 3dw8_B Serine/threonine-protei 100.0 1.6E-37 5.4E-42 267.0 29.5 245 50-302 27-372 (447)
92 3k26_A Polycomb protein EED; W 100.0 1.1E-37 3.8E-42 260.9 26.3 242 2-260 67-366 (366)
93 4gq1_A NUP37; propeller, trans 100.0 4.4E-37 1.5E-41 259.6 29.1 234 63-300 100-386 (393)
94 1sq9_A Antiviral protein SKI8; 100.0 1.8E-36 6.1E-41 256.5 32.0 243 50-302 15-321 (397)
95 3lrv_A PRE-mRNA-splicing facto 100.0 8.4E-37 2.9E-41 253.5 28.4 267 12-300 44-330 (343)
96 2aq5_A Coronin-1A; WD40 repeat 100.0 1E-36 3.5E-41 258.5 28.5 246 54-302 37-298 (402)
97 3dm0_A Maltose-binding peripla 100.0 3.3E-36 1.1E-40 272.4 33.1 246 49-302 380-631 (694)
98 2j04_A TAU60, YPL007P, hypothe 100.0 3.3E-37 1.1E-41 262.0 24.4 260 3-302 14-296 (588)
99 3zwl_B Eukaryotic translation 100.0 2.1E-35 7.1E-40 247.2 34.9 241 50-302 31-303 (369)
100 3i2n_A WD repeat-containing pr 100.0 1.8E-36 6E-41 252.8 27.5 243 50-302 17-290 (357)
101 3ei3_B DNA damage-binding prot 100.0 2.8E-36 9.4E-41 254.3 28.7 239 50-302 72-338 (383)
102 4gga_A P55CDC, cell division c 100.0 1.4E-35 5E-40 252.8 33.3 255 2-275 145-409 (420)
103 4e54_B DNA damage-binding prot 100.0 1.5E-36 5.1E-41 260.0 27.3 244 51-302 119-386 (435)
104 1yfq_A Cell cycle arrest prote 100.0 6.5E-36 2.2E-40 248.0 29.6 241 51-302 11-281 (342)
105 3jro_A Fusion protein of prote 100.0 1.5E-36 5E-41 276.3 27.6 245 51-302 9-284 (753)
106 4aow_A Guanine nucleotide-bind 100.0 4.5E-35 1.5E-39 242.7 34.2 244 51-302 38-285 (340)
107 3jro_A Fusion protein of prote 100.0 1.5E-36 5E-41 276.3 26.3 247 2-262 7-287 (753)
108 3gre_A Serine/threonine-protei 100.0 1.2E-36 4.1E-41 260.9 24.1 270 12-302 35-358 (437)
109 3odt_A Protein DOA1; ubiquitin 100.0 1.4E-34 4.9E-39 236.9 31.8 232 51-302 18-254 (313)
110 3bws_A Protein LP49; two-domai 100.0 1.4E-34 4.6E-39 247.8 32.6 285 4-302 122-431 (433)
111 4h5i_A Guanine nucleotide-exch 100.0 2.7E-35 9.2E-40 246.1 27.4 249 3-262 72-345 (365)
112 2j04_A TAU60, YPL007P, hypothe 100.0 2.1E-35 7.2E-40 251.0 24.4 258 2-292 50-350 (588)
113 1l0q_A Surface layer protein; 100.0 2.3E-33 7.7E-38 237.1 34.9 264 19-302 6-274 (391)
114 3lrv_A PRE-mRNA-splicing facto 100.0 4.2E-35 1.4E-39 243.3 23.7 229 56-301 41-290 (343)
115 4a11_B DNA excision repair pro 100.0 7.1E-34 2.4E-38 241.2 30.4 281 2-302 97-404 (408)
116 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.6E-33 5.6E-38 242.2 31.4 240 53-301 6-337 (450)
117 4ggc_A P55CDC, cell division c 100.0 5.9E-33 2E-37 227.8 31.9 242 2-261 65-316 (318)
118 1p22_A F-BOX/WD-repeat protein 100.0 8E-33 2.7E-37 237.0 32.8 228 53-302 135-364 (435)
119 3bws_A Protein LP49; two-domai 100.0 1.5E-32 5.1E-37 235.1 30.8 237 54-302 125-389 (433)
120 1l0q_A Surface layer protein; 100.0 7.4E-32 2.5E-36 227.8 33.7 279 3-302 30-341 (391)
121 4gq1_A NUP37; propeller, trans 100.0 1.4E-33 4.7E-38 238.3 22.0 247 3-260 88-389 (393)
122 3vu4_A KMHSV2; beta-propeller 100.0 3.2E-32 1.1E-36 226.8 28.6 229 52-302 20-270 (355)
123 3mmy_A MRNA export factor; mRN 100.0 4.9E-32 1.7E-36 226.7 29.0 241 51-302 39-303 (368)
124 2w18_A PALB2, fancn, partner a 100.0 1.1E-31 3.9E-36 214.8 29.6 276 7-301 42-355 (356)
125 2hqs_A Protein TOLB; TOLB, PAL 100.0 5.7E-31 1.9E-35 223.6 27.8 279 5-302 63-386 (415)
126 3f3f_A Nucleoporin SEH1; struc 100.0 1E-30 3.5E-35 216.8 28.5 208 91-303 5-249 (351)
127 2w18_A PALB2, fancn, partner a 100.0 1.2E-30 4E-35 209.0 23.0 188 63-258 144-355 (356)
128 3u4y_A Uncharacterized protein 100.0 5.6E-28 1.9E-32 199.4 30.9 278 10-303 3-304 (331)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.7E-28 5.7E-33 208.4 27.7 237 24-284 159-409 (415)
130 1nir_A Nitrite reductase; hemo 100.0 6.8E-28 2.3E-32 210.7 30.7 276 11-302 144-457 (543)
131 1nir_A Nitrite reductase; hemo 100.0 6.8E-28 2.3E-32 210.7 30.7 282 7-302 181-513 (543)
132 1ri6_A Putative isomerase YBHE 100.0 4.7E-27 1.6E-31 194.6 32.3 270 19-301 8-306 (343)
133 3vgz_A Uncharacterized protein 100.0 8.1E-27 2.8E-31 194.1 33.3 270 4-294 40-335 (353)
134 2ojh_A Uncharacterized protein 100.0 1.1E-27 3.9E-32 194.0 27.4 257 23-294 21-293 (297)
135 2ecf_A Dipeptidyl peptidase IV 100.0 4.9E-28 1.7E-32 220.8 27.9 287 4-301 36-411 (741)
136 1xfd_A DIP, dipeptidyl aminope 100.0 2.7E-28 9.1E-33 221.9 24.1 285 5-301 17-391 (723)
137 2z3z_A Dipeptidyl aminopeptida 100.0 2.6E-26 8.8E-31 208.3 29.6 277 5-302 82-434 (706)
138 2ecf_A Dipeptidyl peptidase IV 100.0 1E-26 3.4E-31 212.1 26.4 277 6-301 110-457 (741)
139 1ri6_A Putative isomerase YBHE 100.0 7.2E-26 2.5E-30 187.5 28.8 272 2-285 35-335 (343)
140 2ojh_A Uncharacterized protein 100.0 2.5E-26 8.7E-31 186.0 23.0 234 2-246 39-291 (297)
141 2oit_A Nucleoporin 214KDA; NH2 100.0 2.7E-25 9.3E-30 189.3 28.8 293 4-303 36-405 (434)
142 3o4h_A Acylamino-acid-releasin 99.9 5.5E-26 1.9E-30 201.6 25.3 270 4-301 21-313 (582)
143 3u4y_A Uncharacterized protein 99.9 1.2E-24 4.2E-29 179.3 29.7 241 4-262 40-306 (331)
144 1xfd_A DIP, dipeptidyl aminope 99.9 2.6E-25 8.8E-30 202.3 27.9 272 6-292 62-429 (723)
145 3hfq_A Uncharacterized protein 99.9 2.5E-24 8.6E-29 178.7 31.4 266 23-301 15-315 (347)
146 1k32_A Tricorn protease; prote 99.9 2.2E-25 7.7E-30 209.9 27.2 276 2-301 201-500 (1045)
147 1pby_B Quinohemoprotein amine 99.9 1.2E-24 4E-29 179.7 26.7 261 19-302 5-309 (337)
148 1k32_A Tricorn protease; prote 99.9 9.9E-25 3.4E-29 205.5 29.3 277 3-302 294-636 (1045)
149 3hfq_A Uncharacterized protein 99.9 7.8E-24 2.7E-28 175.8 30.3 251 3-262 38-321 (347)
150 2oit_A Nucleoporin 214KDA; NH2 99.9 2.4E-25 8.4E-30 189.6 21.5 201 54-261 39-279 (434)
151 3scy_A Hypothetical bacterial 99.9 2.9E-23 1E-27 173.3 33.4 265 23-301 26-335 (361)
152 3vgz_A Uncharacterized protein 99.9 6.6E-24 2.3E-28 176.5 29.0 237 54-302 43-302 (353)
153 2z3z_A Dipeptidyl aminopeptida 99.9 8.4E-25 2.9E-29 198.4 23.8 270 6-293 27-376 (706)
154 1pby_B Quinohemoprotein amine 99.9 3.6E-24 1.2E-28 176.8 24.2 248 6-271 35-320 (337)
155 1z68_A Fibroblast activation p 99.9 2E-24 6.8E-29 196.3 23.5 274 8-301 19-389 (719)
156 3o4h_A Acylamino-acid-releasin 99.9 5.1E-24 1.8E-28 189.0 21.5 232 52-301 22-274 (582)
157 3scy_A Hypothetical bacterial 99.9 4.2E-22 1.4E-26 166.2 30.5 265 3-281 48-360 (361)
158 3pe7_A Oligogalacturonate lyas 99.9 3.8E-23 1.3E-27 174.2 22.7 273 10-300 41-379 (388)
159 1jmx_B Amine dehydrogenase; ox 99.9 3E-22 1E-26 166.1 26.2 238 9-270 4-334 (349)
160 1jmx_B Amine dehydrogenase; ox 99.9 6.6E-22 2.3E-26 164.0 25.5 231 55-302 3-324 (349)
161 1jof_A Carboxy-CIS,CIS-muconat 99.9 1.8E-21 6.2E-26 162.6 27.4 266 24-302 14-340 (365)
162 1z68_A Fibroblast activation p 99.9 2.6E-22 8.8E-27 182.4 23.5 278 6-301 61-441 (719)
163 4a5s_A Dipeptidyl peptidase 4 99.9 1.4E-21 4.9E-26 177.8 28.0 284 4-300 16-395 (740)
164 1jof_A Carboxy-CIS,CIS-muconat 99.9 6.6E-21 2.3E-25 159.2 28.5 245 5-261 40-342 (365)
165 3c5m_A Oligogalacturonate lyas 99.9 4.6E-22 1.6E-26 168.0 18.9 274 6-300 37-379 (396)
166 4a5s_A Dipeptidyl peptidase 4 99.9 3.1E-20 1.1E-24 169.0 26.2 237 54-300 19-350 (740)
167 3azo_A Aminopeptidase; POP fam 99.9 8.9E-20 3E-24 164.2 27.1 288 2-300 21-364 (662)
168 1q7f_A NHL, brain tumor CG1071 99.9 1.8E-18 6.1E-23 139.5 30.4 234 54-303 32-280 (286)
169 2gop_A Trilobed protease; beta 99.9 8.1E-19 2.8E-23 145.5 28.4 255 5-301 15-329 (347)
170 3fvz_A Peptidyl-glycine alpha- 99.9 3.9E-19 1.3E-23 146.2 25.8 242 5-261 24-323 (329)
171 2oiz_A Aromatic amine dehydrog 99.9 6.6E-19 2.3E-23 146.5 26.7 259 23-302 30-333 (361)
172 3pe7_A Oligogalacturonate lyas 99.9 2.4E-19 8.2E-24 150.9 24.2 263 29-302 15-328 (388)
173 3fvz_A Peptidyl-glycine alpha- 99.9 1E-18 3.4E-23 143.8 26.8 240 53-303 25-322 (329)
174 2dg1_A DRP35, lactonase; beta 99.9 1.5E-18 5E-23 143.1 27.1 268 4-294 5-301 (333)
175 1q7f_A NHL, brain tumor CG1071 99.8 4.8E-18 1.6E-22 137.0 29.5 243 3-261 28-281 (286)
176 2oiz_A Aromatic amine dehydrog 99.8 2.3E-18 7.7E-23 143.3 26.6 261 9-285 54-360 (361)
177 2z2n_A Virginiamycin B lyase; 99.8 7.4E-17 2.5E-21 130.6 34.9 275 3-300 13-292 (299)
178 3azo_A Aminopeptidase; POP fam 99.8 1.2E-18 4.2E-23 156.9 24.0 243 9-262 81-371 (662)
179 1rwi_B Serine/threonine-protei 99.8 9.9E-18 3.4E-22 133.9 26.1 240 53-304 25-265 (270)
180 2xdw_A Prolyl endopeptidase; a 99.8 3.5E-17 1.2E-21 148.4 30.6 248 3-262 123-416 (710)
181 3dsm_A Uncharacterized protein 99.8 6.5E-17 2.2E-21 132.8 28.1 265 23-304 16-303 (328)
182 2xdw_A Prolyl endopeptidase; a 99.8 1.1E-16 3.6E-21 145.2 31.3 238 53-301 126-412 (710)
183 3c5m_A Oligogalacturonate lyas 99.8 4.9E-18 1.7E-22 143.2 21.1 261 28-301 14-327 (396)
184 2dg1_A DRP35, lactonase; beta 99.8 3.2E-17 1.1E-21 135.1 24.6 235 54-302 8-262 (333)
185 1rwi_B Serine/threonine-protei 99.8 7.3E-17 2.5E-21 128.8 25.8 238 6-262 25-266 (270)
186 1qks_A Cytochrome CD1 nitrite 99.8 5.6E-16 1.9E-20 135.4 33.0 281 6-301 198-536 (567)
187 2bkl_A Prolyl endopeptidase; m 99.8 1.8E-17 6E-22 149.9 23.4 247 3-262 119-399 (695)
188 3e5z_A Putative gluconolactona 99.8 5.8E-17 2E-21 131.3 24.2 226 54-298 30-282 (296)
189 1qks_A Cytochrome CD1 nitrite 99.8 9.4E-16 3.2E-20 134.0 33.0 274 14-303 165-477 (567)
190 2qc5_A Streptogramin B lactona 99.8 2.3E-15 7.8E-20 121.9 33.2 275 4-300 19-297 (300)
191 3e5z_A Putative gluconolactona 99.8 3.1E-16 1.1E-20 127.0 26.4 234 4-262 27-288 (296)
192 2gop_A Trilobed protease; beta 99.8 2.7E-16 9.3E-21 130.2 25.3 232 6-273 60-341 (347)
193 2bkl_A Prolyl endopeptidase; m 99.8 1.6E-16 5.3E-21 143.7 24.9 275 12-302 75-396 (695)
194 3dsm_A Uncharacterized protein 99.8 1.4E-15 4.9E-20 124.8 28.3 249 7-280 46-319 (328)
195 3no2_A Uncharacterized protein 99.8 1.5E-15 5.1E-20 121.2 26.2 213 63-291 4-231 (276)
196 2z2n_A Virginiamycin B lyase; 99.7 1.1E-14 3.7E-19 117.9 30.0 235 54-302 17-254 (299)
197 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 5.5E-15 1.9E-19 120.6 27.3 243 5-261 18-300 (314)
198 2mad_H Methylamine dehydrogena 99.7 5.2E-14 1.8E-18 117.2 32.4 268 12-302 28-349 (373)
199 1yr2_A Prolyl oligopeptidase; 99.7 5.6E-15 1.9E-19 134.5 26.7 238 52-302 163-440 (741)
200 1yr2_A Prolyl oligopeptidase; 99.7 1.3E-14 4.5E-19 132.1 27.7 244 5-262 163-443 (741)
201 1pjx_A Dfpase, DIISOPROPYLFLUO 99.7 3.5E-14 1.2E-18 115.8 27.4 234 54-302 20-298 (314)
202 3hrp_A Uncharacterized protein 99.7 4.2E-14 1.4E-18 119.4 27.3 233 5-258 131-408 (409)
203 3no2_A Uncharacterized protein 99.7 4.6E-14 1.6E-18 112.6 26.0 210 16-244 5-230 (276)
204 3hrp_A Uncharacterized protein 99.7 7E-14 2.4E-18 118.0 27.9 232 54-300 133-407 (409)
205 2qc5_A Streptogramin B lactona 99.7 2.4E-13 8.2E-18 109.9 29.9 236 54-302 22-259 (300)
206 3g4e_A Regucalcin; six bladed 99.7 1.3E-13 4.4E-18 111.5 26.2 223 8-246 16-261 (297)
207 3g4e_A Regucalcin; six bladed 99.7 2E-13 6.9E-18 110.4 27.3 224 55-292 16-261 (297)
208 3sjl_D Methylamine dehydrogena 99.7 1.7E-13 5.7E-18 112.8 26.9 272 10-302 38-362 (386)
209 3sjl_D Methylamine dehydrogena 99.7 9.5E-14 3.3E-18 114.3 25.2 260 9-283 82-384 (386)
210 2mad_H Methylamine dehydrogena 99.7 1.1E-12 3.7E-17 109.2 31.5 244 9-267 70-356 (373)
211 3iuj_A Prolyl endopeptidase; h 99.6 9E-14 3.1E-18 125.5 25.9 246 3-262 127-407 (693)
212 3c75_H MADH, methylamine dehyd 99.6 1.4E-13 4.8E-18 115.3 24.0 258 24-302 99-401 (426)
213 2qe8_A Uncharacterized protein 99.6 6.7E-14 2.3E-18 115.6 21.3 271 5-300 17-318 (343)
214 1xip_A Nucleoporin NUP159; bet 99.6 1.9E-14 6.4E-19 119.0 17.5 175 53-245 39-232 (388)
215 2ghs_A AGR_C_1268P; regucalcin 99.6 3.7E-12 1.3E-16 104.4 30.3 221 55-293 52-292 (326)
216 1xip_A Nucleoporin NUP159; bet 99.6 5.6E-14 1.9E-18 116.1 18.5 172 99-290 39-231 (388)
217 2ghs_A AGR_C_1268P; regucalcin 99.6 4.4E-12 1.5E-16 103.9 28.6 219 8-246 52-291 (326)
218 3iuj_A Prolyl endopeptidase; h 99.6 3.7E-13 1.3E-17 121.5 23.8 236 52-301 129-403 (693)
219 2ece_A 462AA long hypothetical 99.6 3.8E-12 1.3E-16 105.6 25.7 261 24-291 43-399 (462)
220 3c75_H MADH, methylamine dehyd 99.6 2.6E-12 9E-17 107.6 24.7 247 9-268 122-409 (426)
221 3dr2_A Exported gluconolactona 99.6 2.1E-12 7.3E-17 104.8 22.8 225 54-298 47-302 (305)
222 3dr2_A Exported gluconolactona 99.5 1.7E-11 5.7E-16 99.5 24.0 221 5-245 45-295 (305)
223 1mda_H Methylamine dehydrogena 99.5 6.4E-12 2.2E-16 103.6 19.7 250 25-302 47-345 (368)
224 1npe_A Nidogen, entactin; glyc 99.5 6E-10 2E-14 88.5 29.9 245 23-285 9-263 (267)
225 2ece_A 462AA long hypothetical 99.5 4.6E-11 1.6E-15 99.2 22.9 227 11-245 88-399 (462)
226 1mda_H Methylamine dehydrogena 99.4 7.9E-12 2.7E-16 103.1 17.0 252 9-282 69-366 (368)
227 1fwx_A Nitrous oxide reductase 99.4 2.5E-11 8.6E-16 104.2 20.1 235 14-262 99-433 (595)
228 1npe_A Nidogen, entactin; glyc 99.4 1.7E-09 5.9E-14 85.8 29.0 231 65-302 2-237 (267)
229 2qe8_A Uncharacterized protein 99.4 3.7E-11 1.3E-15 99.1 18.4 223 3-245 65-309 (343)
230 3hxj_A Pyrrolo-quinoline quino 99.4 1.5E-10 5.1E-15 94.8 21.1 262 7-302 62-323 (330)
231 2hz6_A Endoplasmic reticulum t 99.4 6.1E-13 2.1E-17 110.8 5.7 203 63-285 8-216 (369)
232 3hxj_A Pyrrolo-quinoline quino 99.3 5.4E-11 1.8E-15 97.5 17.1 259 9-302 24-283 (330)
233 1kb0_A Quinohemoprotein alcoho 99.3 7.5E-10 2.6E-14 99.3 24.9 260 15-289 128-536 (677)
234 1kb0_A Quinohemoprotein alcoho 99.3 1.3E-09 4.6E-14 97.8 25.2 276 15-302 77-506 (677)
235 1yiq_A Quinohemoprotein alcoho 99.3 1.2E-09 4.1E-14 98.3 24.7 275 15-302 70-504 (689)
236 3v64_C Agrin; beta propeller, 99.3 4E-08 1.4E-12 81.0 31.1 241 7-263 36-278 (349)
237 1fwx_A Nitrous oxide reductase 99.3 3.3E-10 1.1E-14 97.4 18.9 221 63-292 100-407 (595)
238 2hz6_A Endoplasmic reticulum t 99.3 2.9E-12 1E-16 106.7 6.2 200 16-239 9-216 (369)
239 3q7m_A Lipoprotein YFGL, BAMB; 99.3 1E-08 3.6E-13 85.6 27.7 257 14-300 102-375 (376)
240 2iwa_A Glutamine cyclotransfer 99.3 6.1E-09 2.1E-13 81.4 23.0 193 55-261 24-238 (266)
241 3v65_B Low-density lipoprotein 99.2 4.9E-08 1.7E-12 81.7 29.7 241 23-280 95-337 (386)
242 1yiq_A Quinohemoprotein alcoho 99.2 6.1E-09 2.1E-13 93.7 25.8 260 15-289 121-534 (689)
243 3q7m_A Lipoprotein YFGL, BAMB; 99.2 1.5E-08 5.2E-13 84.6 26.8 265 15-302 53-336 (376)
244 3nol_A Glutamine cyclotransfer 99.2 5.2E-09 1.8E-13 80.8 20.9 181 100-292 45-244 (262)
245 2iwa_A Glutamine cyclotransfer 99.2 5.5E-09 1.9E-13 81.6 21.3 193 7-216 23-238 (266)
246 3v64_C Agrin; beta propeller, 99.2 2E-07 6.7E-12 76.9 30.1 234 55-300 37-272 (349)
247 3nok_A Glutaminyl cyclase; bet 99.2 9.7E-09 3.3E-13 79.3 19.6 180 100-292 57-254 (268)
248 4a2l_A BT_4663, two-component 99.2 7.2E-07 2.5E-11 82.0 35.7 276 4-301 214-524 (795)
249 3v65_B Low-density lipoprotein 99.1 1.2E-07 3.9E-12 79.4 26.8 226 65-300 88-315 (386)
250 4a2l_A BT_4663, two-component 99.1 1.2E-06 4E-11 80.6 35.6 269 7-301 175-478 (795)
251 3mbr_X Glutamine cyclotransfer 99.1 6.5E-08 2.2E-12 74.1 22.1 191 89-292 11-223 (243)
252 1ijq_A LDL receptor, low-densi 99.1 8E-07 2.7E-11 72.2 29.8 226 66-301 3-236 (316)
253 3nol_A Glutamine cyclotransfer 99.1 3.5E-08 1.2E-12 76.2 19.6 178 8-204 46-244 (262)
254 2fp8_A Strictosidine synthase; 99.1 2E-07 6.7E-12 76.1 25.4 233 55-302 22-312 (322)
255 3sov_A LRP-6, low-density lipo 99.1 1.1E-06 3.6E-11 71.4 29.3 231 20-263 9-241 (318)
256 1ijq_A LDL receptor, low-densi 99.1 2.7E-06 9.2E-11 69.1 31.5 229 21-263 7-241 (316)
257 2p4o_A Hypothetical protein; p 99.1 2.1E-07 7.1E-12 75.3 24.7 223 6-246 33-277 (306)
258 1kv9_A Type II quinohemoprotei 99.1 5E-08 1.7E-12 87.5 22.8 275 15-302 66-487 (668)
259 2fp8_A Strictosidine synthase; 99.1 9.6E-08 3.3E-12 77.9 22.7 242 7-261 21-314 (322)
260 2p4o_A Hypothetical protein; p 99.1 3.7E-07 1.3E-11 73.8 25.9 227 54-294 34-279 (306)
261 3nok_A Glutaminyl cyclase; bet 99.1 7.1E-08 2.4E-12 74.5 20.0 177 55-246 58-254 (268)
262 3p5b_L Low density lipoprotein 99.0 2.6E-06 9E-11 71.5 30.0 225 66-300 85-317 (400)
263 3v9f_A Two-component system se 99.0 4.3E-06 1.5E-10 76.8 33.9 280 5-301 211-522 (781)
264 3sov_A LRP-6, low-density lipo 99.0 1.8E-06 6.1E-11 70.1 27.5 228 66-301 6-236 (318)
265 3v9f_A Two-component system se 99.0 2.2E-06 7.5E-11 78.6 31.3 276 5-301 258-566 (781)
266 3qqz_A Putative uncharacterize 99.0 7.6E-07 2.6E-11 69.1 24.0 203 92-301 21-251 (255)
267 3p5b_L Low density lipoprotein 99.0 9.6E-06 3.3E-10 68.1 32.4 244 23-280 91-339 (400)
268 2ad6_A Methanol dehydrogenase 99.0 6.4E-07 2.2E-11 78.8 25.4 258 15-289 115-523 (571)
269 3mbr_X Glutamine cyclotransfer 99.0 5.3E-07 1.8E-11 69.0 21.6 179 7-204 23-223 (243)
270 2xe4_A Oligopeptidase B; hydro 98.9 7.5E-07 2.6E-11 81.1 25.4 242 6-262 175-460 (751)
271 3qqz_A Putative uncharacterize 98.9 4.9E-06 1.7E-10 64.6 26.1 197 5-213 27-251 (255)
272 1k3i_A Galactose oxidase precu 98.9 8.9E-08 3E-12 86.0 18.6 274 9-292 190-530 (656)
273 1kv9_A Type II quinohemoprotei 98.9 1.5E-06 5.2E-11 77.9 25.7 261 15-291 117-520 (668)
274 3tc9_A Hypothetical hydrolase; 98.9 2E-06 6.8E-11 72.9 24.5 238 6-259 138-429 (430)
275 3tc9_A Hypothetical hydrolase; 98.9 4E-06 1.4E-10 71.1 25.9 233 54-300 139-427 (430)
276 4hw6_A Hypothetical protein, I 98.9 1.3E-06 4.5E-11 74.0 22.8 238 5-259 139-432 (433)
277 3m0c_C LDL receptor, low-densi 98.8 7.1E-06 2.4E-10 74.5 28.1 205 54-263 426-635 (791)
278 2xe4_A Oligopeptidase B; hydro 98.8 1.5E-06 5E-11 79.3 23.6 195 53-258 175-398 (751)
279 4a0p_A LRP6, LRP-6, low-densit 98.8 4.8E-05 1.7E-09 67.5 32.2 229 18-262 8-239 (628)
280 2ad6_A Methanol dehydrogenase 98.8 6.7E-06 2.3E-10 72.3 26.3 273 15-301 62-492 (571)
281 3m0c_C LDL receptor, low-densi 98.8 2.5E-05 8.7E-10 70.9 29.6 225 66-300 397-629 (791)
282 1w6s_A Methanol dehydrogenase 98.8 8E-06 2.7E-10 72.0 25.7 196 15-219 62-346 (599)
283 4hw6_A Hypothetical protein, I 98.8 1.6E-05 5.5E-10 67.4 26.6 236 54-301 141-431 (433)
284 3kya_A Putative phosphatase; s 98.8 1.2E-05 4E-10 68.6 25.5 247 6-263 140-478 (496)
285 1w6s_A Methanol dehydrogenase 98.8 1E-05 3.4E-10 71.3 25.5 260 10-286 111-529 (599)
286 2xbg_A YCF48-like protein; pho 98.7 6.1E-05 2.1E-09 61.4 33.4 274 5-301 36-320 (327)
287 4a0p_A LRP6, LRP-6, low-densit 98.7 8.6E-05 2.9E-09 66.0 30.1 225 65-300 7-234 (628)
288 1flg_A Protein (quinoprotein e 98.7 2.7E-05 9.3E-10 68.6 26.2 163 120-289 291-545 (582)
289 1n7d_A LDL receptor, low-densi 98.7 3.7E-07 1.2E-11 82.2 13.8 220 73-301 385-612 (699)
290 1k3i_A Galactose oxidase precu 98.7 2.2E-06 7.6E-11 76.9 18.7 225 8-245 246-529 (656)
291 1flg_A Protein (quinoprotein e 98.6 3.5E-05 1.2E-09 67.9 25.1 277 15-301 68-514 (582)
292 3s94_A LRP-6, low-density lipo 98.6 6.2E-05 2.1E-09 66.8 25.8 227 23-262 17-245 (619)
293 2ism_A Putative oxidoreductase 98.6 4E-05 1.4E-09 63.1 22.6 232 6-245 32-333 (352)
294 1n7d_A LDL receptor, low-densi 98.6 1.1E-06 3.8E-11 79.1 13.8 202 6-219 407-618 (699)
295 3amr_A 3-phytase; beta-propell 98.6 0.0001 3.5E-09 59.5 23.6 196 64-268 40-271 (355)
296 3kya_A Putative phosphatase; s 98.5 4E-05 1.4E-09 65.3 22.0 201 99-302 140-409 (496)
297 3s94_A LRP-6, low-density lipo 98.5 7.7E-05 2.6E-09 66.2 24.3 227 66-300 11-240 (619)
298 2p9w_A MAL S 1 allergenic prot 98.5 0.00011 3.8E-09 58.8 22.5 197 55-260 16-265 (334)
299 2xzh_A Clathrin heavy chain 1; 98.4 0.00042 1.4E-08 55.1 29.9 230 56-300 71-329 (365)
300 2p9w_A MAL S 1 allergenic prot 98.4 8.5E-05 2.9E-09 59.5 18.8 202 94-300 9-262 (334)
301 3a9g_A Putative uncharacterize 98.4 0.00053 1.8E-08 56.4 24.1 232 6-244 30-329 (354)
302 3sre_A PON1, serum paraoxonase 98.4 0.00026 8.8E-09 57.9 21.8 196 98-300 50-295 (355)
303 2xbg_A YCF48-like protein; pho 98.3 0.00068 2.3E-08 55.2 24.1 232 5-258 80-320 (327)
304 2ism_A Putative oxidoreductase 98.3 0.00094 3.2E-08 54.9 26.2 224 55-291 34-333 (352)
305 3amr_A 3-phytase; beta-propell 98.3 0.00025 8.5E-09 57.3 20.1 188 109-302 39-262 (355)
306 1bpo_A Protein (clathrin); cla 98.3 0.001 3.5E-08 55.0 32.2 253 23-300 47-328 (494)
307 2g8s_A Glucose/sorbosone dehyd 98.2 0.0018 6E-08 53.3 23.0 233 6-245 19-341 (353)
308 3a9g_A Putative uncharacterize 98.1 0.0024 8.1E-08 52.5 26.3 228 54-291 31-330 (354)
309 2xzh_A Clathrin heavy chain 1; 98.0 0.003 1E-07 50.3 27.5 235 10-262 72-334 (365)
310 3sre_A PON1, serum paraoxonase 98.0 0.0043 1.5E-07 50.7 22.4 184 54-244 52-284 (355)
311 3pbp_A Nucleoporin NUP82; beta 98.0 0.0016 5.5E-08 53.9 18.7 143 149-299 29-208 (452)
312 3das_A Putative oxidoreductase 97.9 0.0061 2.1E-07 49.6 23.1 238 5-246 32-327 (347)
313 1bpo_A Protein (clathrin); cla 97.9 0.0072 2.5E-07 50.2 28.0 236 9-262 70-333 (494)
314 2vpj_A Kelch-like protein 12; 97.9 0.0036 1.2E-07 50.0 19.3 177 24-216 31-232 (301)
315 2g8s_A Glucose/sorbosone dehyd 97.9 0.0081 2.8E-07 49.3 24.7 234 55-296 21-347 (353)
316 1xi4_A Clathrin heavy chain; a 97.9 0.0036 1.2E-07 59.7 21.0 229 56-299 70-327 (1630)
317 3ii7_A Kelch-like protein 7; p 97.8 0.0052 1.8E-07 49.3 20.0 224 19-262 16-274 (306)
318 2vpj_A Kelch-like protein 12; 97.8 0.0034 1.2E-07 50.2 18.5 224 63-301 14-276 (301)
319 3ei3_A DNA damage-binding prot 97.8 0.025 8.7E-07 53.9 29.8 174 122-302 809-998 (1158)
320 2xn4_A Kelch-like protein 2; s 97.7 0.0085 2.9E-07 47.9 19.1 176 24-216 30-230 (302)
321 3pbp_A Nucleoporin NUP82; beta 97.6 0.019 6.6E-07 47.6 19.8 144 109-256 31-208 (452)
322 1tl2_A L10, protein (tachylect 97.6 0.012 4E-07 44.2 18.5 173 110-297 4-204 (236)
323 1zgk_A Kelch-like ECH-associat 97.6 0.015 5.1E-07 46.7 18.9 185 15-216 24-241 (308)
324 2xn4_A Kelch-like protein 2; s 97.6 0.014 4.9E-07 46.5 18.7 225 63-302 15-275 (302)
325 3ii7_A Kelch-like protein 7; p 97.6 0.018 6E-07 46.1 19.3 225 64-302 12-271 (306)
326 3ott_A Two-component system se 97.5 0.061 2.1E-06 49.2 32.8 260 5-294 22-299 (758)
327 2uvk_A YJHT; unknown function, 97.4 0.042 1.4E-06 45.0 19.3 97 13-119 17-128 (357)
328 3sbq_A Nitrous-oxide reductase 97.3 0.062 2.1E-06 46.2 23.2 120 142-262 324-480 (638)
329 3ei3_A DNA damage-binding prot 97.3 0.12 4.3E-06 49.3 29.0 220 64-293 523-757 (1158)
330 1zgk_A Kelch-like ECH-associat 97.3 0.021 7E-07 45.8 16.3 225 63-302 24-286 (308)
331 4asc_A Kelch repeat and BTB do 97.3 0.047 1.6E-06 43.9 19.4 179 22-216 11-222 (315)
332 1tl2_A L10, protein (tachylect 97.3 0.011 3.7E-07 44.3 13.0 133 154-298 5-158 (236)
333 3s25_A Hypothetical 7-bladed b 97.2 0.052 1.8E-06 43.4 19.3 198 63-291 24-241 (302)
334 1xi4_A Clathrin heavy chain; a 97.2 0.042 1.4E-06 52.8 19.3 233 12-262 73-333 (1630)
335 3qhy_B Beta-lactamase inhibito 97.1 0.072 2.5E-06 42.1 22.3 220 54-302 26-245 (282)
336 2woz_A Kelch repeat and BTB do 97.1 0.081 2.8E-06 42.5 19.7 184 18-216 18-232 (318)
337 2zwa_A Leucine carboxyl methyl 97.1 0.11 3.6E-06 47.0 19.9 199 14-216 396-636 (695)
338 4asc_A Kelch repeat and BTB do 97.0 0.092 3.2E-06 42.1 19.7 213 65-293 6-253 (315)
339 2be1_A Serine/threonine-protei 96.9 0.031 1.1E-06 45.3 13.4 193 14-219 9-235 (339)
340 2uvk_A YJHT; unknown function, 96.9 0.078 2.7E-06 43.4 16.3 97 63-162 19-128 (357)
341 3s25_A Hypothetical 7-bladed b 96.8 0.14 4.9E-06 40.8 22.1 202 58-291 59-280 (302)
342 1cru_A Protein (soluble quinop 96.7 0.23 7.9E-06 42.2 29.1 103 55-160 30-162 (454)
343 1cru_A Protein (soluble quinop 96.7 0.24 8.2E-06 42.1 21.3 106 98-204 27-163 (454)
344 3ott_A Two-component system se 96.7 0.37 1.3E-05 44.0 34.0 275 5-301 146-446 (758)
345 2woz_A Kelch repeat and BTB do 96.6 0.21 7.1E-06 40.1 17.8 212 65-293 17-263 (318)
346 3das_A Putative oxidoreductase 96.3 0.33 1.1E-05 39.5 27.0 229 55-291 35-326 (347)
347 3sbq_A Nitrous-oxide reductase 96.2 0.56 1.9E-05 40.5 23.6 229 66-302 72-407 (638)
348 2zwa_A Leucine carboxyl methyl 95.1 1.8 6.2E-05 39.1 18.1 151 109-262 397-579 (695)
349 2be1_A Serine/threonine-protei 95.0 1.2 4E-05 36.1 18.9 144 64-212 10-181 (339)
350 2wg3_C Hedgehog-interacting pr 94.9 1.6 5.4E-05 37.2 26.1 238 6-245 15-354 (463)
351 3b7f_A Glycosyl hydrolase, BNR 94.6 1.7 5.7E-05 36.0 26.2 242 53-299 56-368 (394)
352 3b7f_A Glycosyl hydrolase, BNR 94.0 2.2 7.6E-05 35.3 24.9 215 64-290 22-296 (394)
353 3qhy_B Beta-lactamase inhibito 93.6 2.1 7.1E-05 33.7 20.6 182 98-301 24-205 (282)
354 2wg3_C Hedgehog-interacting pr 92.6 4.4 0.00015 34.5 28.6 105 55-161 17-158 (463)
355 1sqj_A OXG-RCBH, oligoxylogluc 91.8 7.8 0.00027 35.6 24.4 147 53-205 16-190 (789)
356 3kci_A Probable E3 ubiquitin-p 91.7 5 0.00017 33.2 26.9 228 63-301 61-343 (389)
357 4hvt_A Ritya.17583.B, post-pro 90.7 9.3 0.00032 34.6 19.4 241 9-259 133-429 (711)
358 2cn3_A Xyloglucanase, beta-1,4 88.2 15 0.00051 33.4 28.5 194 6-202 24-261 (737)
359 4gq2_M Nucleoporin NUP120; bet 88.1 13 0.00045 35.0 14.2 33 186-218 237-269 (950)
360 1sqj_A OXG-RCBH, oligoxylogluc 85.7 22 0.00074 32.7 23.8 154 4-162 14-190 (789)
361 1wp5_A Topoisomerase IV; broke 82.2 18 0.00061 29.0 25.7 232 63-302 4-276 (323)
362 3q6k_A 43.2 kDa salivary prote 81.9 20 0.00069 29.5 24.7 204 6-239 88-336 (381)
363 4gq2_M Nucleoporin NUP120; bet 80.5 7.2 0.00025 36.7 8.8 38 6-43 237-276 (950)
364 2cn3_A Xyloglucanase, beta-1,4 78.2 40 0.0014 30.6 25.1 105 53-161 24-152 (737)
365 1suu_A DNA gyrase subunit A; t 77.7 25 0.00085 28.0 28.6 228 63-298 7-278 (312)
366 3no0_A DNA gyrase subunit A; D 75.2 27 0.00093 27.2 22.5 197 98-303 24-246 (276)
367 3zwu_A Alkaline phosphatase PH 72.8 14 0.00049 32.4 8.0 61 186-246 477-550 (592)
368 3q6k_A 43.2 kDa salivary prote 72.4 39 0.0013 27.8 22.4 166 121-291 124-342 (381)
369 4a9v_A PHOX; hydrolase, beta-p 72.1 24 0.00083 30.8 9.0 64 227-291 476-549 (592)
370 3no0_A DNA gyrase subunit A; D 68.3 40 0.0014 26.2 21.3 186 63-260 34-246 (276)
371 4a9v_A PHOX; hydrolase, beta-p 68.2 30 0.001 30.3 8.8 62 185-246 476-550 (592)
372 4fhn_B Nucleoporin NUP120; pro 66.8 12 0.0004 36.1 6.7 38 99-137 239-276 (1139)
373 3zwu_A Alkaline phosphatase PH 66.2 34 0.0012 30.1 8.9 62 228-290 477-548 (592)
374 3uc1_A DNA gyrase subunit A; D 65.6 51 0.0017 26.4 20.1 149 63-215 108-279 (327)
375 4hvt_A Ritya.17583.B, post-pro 61.2 96 0.0033 28.1 22.8 235 55-300 132-427 (711)
376 4fhn_B Nucleoporin NUP120; pro 60.6 30 0.001 33.4 8.2 35 54-92 240-274 (1139)
377 1suu_A DNA gyrase subunit A; t 59.6 64 0.0022 25.6 23.6 187 109-302 7-230 (312)
378 3f7f_A Nucleoporin NUP120; nuc 52.6 23 0.0008 31.9 5.6 30 109-138 230-259 (729)
379 1zi0_A DNA gyrase subunit A; b 50.3 92 0.0032 24.6 28.4 233 63-303 2-277 (307)
380 4d9s_A UVB-resistance protein 49.8 1.1E+02 0.0037 25.2 32.6 187 99-300 122-354 (406)
381 4d9s_A UVB-resistance protein 47.8 1.2E+02 0.004 25.0 27.4 223 63-300 24-302 (406)
382 3f7f_A Nucleoporin NUP120; nuc 43.8 1.2E+02 0.0042 27.4 8.7 28 63-93 230-257 (729)
383 1q47_A Semaphorin 3A; beta pro 37.3 1.3E+02 0.0044 25.8 7.7 68 143-210 406-487 (495)
384 1zvt_A Topoisomerase IV subuni 34.9 1.5E+02 0.0052 22.6 15.6 144 111-260 3-163 (256)
385 3uc1_A DNA gyrase subunit A; D 33.7 1.8E+02 0.0062 23.2 26.8 232 63-302 2-278 (327)
386 3a0f_A Xyloglucanase; beta-pro 29.5 3.3E+02 0.011 24.8 20.9 158 4-163 20-203 (763)
387 3kci_A Probable E3 ubiquitin-p 29.0 2.3E+02 0.008 23.0 29.3 194 55-260 108-345 (389)
388 3a0f_A Xyloglucanase; beta-pro 26.4 3.7E+02 0.013 24.5 26.8 148 53-206 22-203 (763)
389 3al9_A Plexin-A2; beta-propell 24.5 1.4E+02 0.0047 26.0 5.8 68 143-210 402-476 (539)
390 1wp5_A Topoisomerase IV; broke 24.5 2.7E+02 0.0091 22.1 22.3 186 109-300 4-222 (323)
391 3l6v_A GYRA, DNA gyrase subuni 23.6 3E+02 0.01 22.4 29.6 148 63-215 6-180 (370)
392 3l6v_A GYRA, DNA gyrase subuni 23.0 3.1E+02 0.011 22.4 23.4 145 109-259 6-179 (370)
393 1ukf_A Avirulence protein AVRP 22.6 78 0.0027 22.8 3.2 37 3-39 117-156 (188)
394 3nvq_A Semaphorin-7A; beta-pro 22.4 2.8E+02 0.0096 24.4 7.3 57 154-210 381-444 (590)
395 4gz8_A Semaphorin-3A; multi-do 21.4 2.8E+02 0.0095 24.9 7.2 56 155-210 431-495 (667)
396 1ukf_A Avirulence protein AVRP 20.5 1.1E+02 0.0039 22.0 3.7 34 140-173 118-151 (188)
397 1q47_A Semaphorin 3A; beta pro 20.3 4.1E+02 0.014 22.7 8.9 68 229-298 406-487 (495)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.9e-52 Score=354.44 Aligned_cols=282 Identities=22% Similarity=0.380 Sum_probs=256.5
Q ss_pred CCcccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|.++|++++|+|++.++++| ||.|++||+.+++....+..|.. .|.+++|+| ++++|++|+.||.|++|
T Consensus 106 gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~-------~V~~v~~~~-~~~~l~sgs~D~~i~iw 177 (410)
T 1vyh_C 106 GHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTD-------SVQDISFDH-SGKLLASCSADMTIKLW 177 (410)
T ss_dssp CCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSS-------CEEEEEECT-TSSEEEEEETTSCCCEE
T ss_pred ccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCC-------cEEEEEEcC-CCCEEEEEeCCCeEEEE
Confidence 589999999999999995554 99999999999988776665543 369999999 99999999999999999
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEE
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASV 159 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 159 (330)
|+.+ .+....+.+|...|.+++|+| ++++|++|+.|++|++||+++++++..+.+|...|.++.++|++. +++++
T Consensus 178 d~~~---~~~~~~~~~h~~~V~~v~~~p-~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~-~l~s~ 252 (410)
T 1vyh_C 178 DFQG---FECIRTMHGHDHNVSSVSIMP-NGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT-LIASC 252 (410)
T ss_dssp ETTS---SCEEECCCCCSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSS-EEEEE
T ss_pred eCCC---CceeEEEcCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCC-EEEEE
Confidence 9987 678888899999999999999 899999999999999999999999999999999999999999998 69999
Q ss_pred ecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCC--------------------CCEEEEEecCCcEEEEeCCCCccc
Q psy6213 160 SENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE--------------------HAWLATASRDKTIKVWDLSIKPSL 219 (330)
Q Consensus 160 ~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~--------------------~~~l~~~~~dg~i~i~d~~~~~~~ 219 (330)
+.|+.|++||+++ ......+..|...|.+++|+|+ +.+|++|+.|+.|++||++++...
T Consensus 253 s~D~~v~vwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~ 331 (410)
T 1vyh_C 253 SNDQTVRVWVVAT-KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCL 331 (410)
T ss_dssp ETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEE
T ss_pred cCCCeEEEEECCC-CceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceE
Confidence 9999999999998 5677788899999999999996 678999999999999999998777
Q ss_pred cceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeee
Q psy6213 220 EYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRA 299 (330)
Q Consensus 220 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 299 (330)
.....|...|.+++|+|++++++ +++ .|+.|++||+.+++. +..+.+|...|++++|+|++.+|++|+.||.|++|
T Consensus 332 ~~~~~h~~~v~~v~~~~~g~~l~-s~s--~D~~i~vwd~~~~~~-~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW 407 (410)
T 1vyh_C 332 MTLVGHDNWVRGVLFHSGGKFIL-SCA--DDKTLRVWDYKNKRC-MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVW 407 (410)
T ss_dssp EEEECCSSCEEEEEECSSSSCEE-EEE--TTTEEEEECCTTSCC-CEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEE
T ss_pred EEEECCCCcEEEEEEcCCCCEEE-EEe--CCCeEEEEECCCCce-EEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Confidence 77778899999999999999855 455 599999999988765 78899999999999999999999999999999999
Q ss_pred ec
Q psy6213 300 KN 301 (330)
Q Consensus 300 ~~ 301 (330)
+.
T Consensus 408 ~~ 409 (410)
T 1vyh_C 408 EC 409 (410)
T ss_dssp C-
T ss_pred eC
Confidence 74
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.2e-51 Score=337.63 Aligned_cols=284 Identities=19% Similarity=0.305 Sum_probs=250.8
Q ss_pred CCcccceEEEEeeC----CCee-ecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCc
Q psy6213 2 AYLSPVHKHGLKAD----NGLA-QPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGA 75 (330)
Q Consensus 2 ~H~~~v~~~~~s~~----~~~~-~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 75 (330)
+|.++|++++|+|+ +.++ +++ |+.|+||++..++......+. .+...|.+++|+| ++.++++++.|+.
T Consensus 30 ~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~-----gh~~~v~~~~~~~-~~~~l~s~s~D~~ 103 (321)
T 3ow8_A 30 AHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLE-----GHQLGVVSVDISH-TLPIAASSSLDAH 103 (321)
T ss_dssp SSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEEC-----CCSSCEEEEEECS-SSSEEEEEETTSE
T ss_pred cCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeec-----cCCCCEEEEEECC-CCCEEEEEeCCCc
Confidence 69999999999985 4564 445 999999999876544332222 2234479999999 9999999999999
Q ss_pred EEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcE
Q psy6213 76 VVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYA 155 (330)
Q Consensus 76 i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 155 (330)
|++||+.+ .+....+..|...+.+++|+| ++++|++++.||.|++||+++++....+..+...+.+++|+|+++ +
T Consensus 104 i~lWd~~~---~~~~~~~~~~~~~~~~~~~sp-dg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~ 178 (321)
T 3ow8_A 104 IRLWDLEN---GKQIKSIDAGPVDAWTLAFSP-DSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGK-Y 178 (321)
T ss_dssp EEEEETTT---TEEEEEEECCTTCCCCEEECT-TSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSS-E
T ss_pred EEEEECCC---CCEEEEEeCCCccEEEEEECC-CCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCC-E
Confidence 99999988 778888888999999999999 899999999999999999999999988988999999999999999 6
Q ss_pred EEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEc
Q psy6213 156 FASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWR 235 (330)
Q Consensus 156 ~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 235 (330)
+++++.||.|++||+++ ++.+..+.+|..+|.+++|+|++++|++++.|+.|++||++..+.......|...|.+++|+
T Consensus 179 lasg~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~s 257 (321)
T 3ow8_A 179 LASGAIDGIINIFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFC 257 (321)
T ss_dssp EEEEETTSCEEEEETTT-TEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEEC
T ss_pred EEEEcCCCeEEEEECCC-CcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEEC
Confidence 99999999999999998 67788899999999999999999999999999999999999887777777788999999999
Q ss_pred CCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeec
Q psy6213 236 PQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKN 301 (330)
Q Consensus 236 ~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~ 301 (330)
|++++ +++++ .|+.|++||+++++. +..+.+|...|.+++|+|++++|++++.||.|++|+.
T Consensus 258 p~~~~-l~s~s--~D~~v~iwd~~~~~~-~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 258 PDDTH-FVSSS--SDKSVKVWDVGTRTC-VHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp TTSSE-EEEEE--TTSCEEEEETTTTEE-EEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred CCCCE-EEEEe--CCCcEEEEeCCCCEE-EEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 99997 55555 699999999998866 8888999999999999999999999999999999974
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.1e-50 Score=336.47 Aligned_cols=283 Identities=23% Similarity=0.298 Sum_probs=247.2
Q ss_pred CCcccceEEEEeeCCCee-ecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLA-QPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~-~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|.++|++++|+|+++++ +++ ||.|++||..+++....+..+.. .|.+++|+| ++++|++|+.|+.+++|
T Consensus 53 gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~-------~v~~~~~s~-~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 53 GHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSS-------WVMTCAYAP-SGNYVACGGLDNICSIY 124 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSS-------CEEEEEECT-TSSEEEEEETTCEEEEE
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCc-------cEEEEEECC-CCCEEEEEeCCCeEEEE
Confidence 599999999999999994 445 99999999999887766554433 368999999 99999999999999999
Q ss_pred ECCCCC-CCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEE
Q psy6213 80 NLGQIS-RSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFAS 158 (330)
Q Consensus 80 ~~~~~~-~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 158 (330)
++.+.. .......+.+|...|.++.|++ + ..+++++.|+.|++||+++++.+..+.+|...|.+++|+|+++ ++++
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~-~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s 201 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLD-D-NQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR-LFVS 201 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEE-T-TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEE
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECC-C-CcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCC-EEEE
Confidence 997632 2245567789999999999997 4 4589999999999999999999999999999999999999998 6999
Q ss_pred EecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceec--cccceEEEEEcC
Q psy6213 159 VSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSIN--TIASVSRIKWRP 236 (330)
Q Consensus 159 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~ 236 (330)
|+.||.|++||+++ ......+.+|...|.+++|+|++++|++++.||.|++||++..+....... +...+.+++|+|
T Consensus 202 g~~d~~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~ 280 (340)
T 1got_B 202 GACDASAKLWDVRE-GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSK 280 (340)
T ss_dssp EETTSCEEEEETTT-CSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred EeCCCcEEEEECCC-CeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECC
Confidence 99999999999998 667788899999999999999999999999999999999998754433322 234799999999
Q ss_pred CCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeee
Q psy6213 237 QRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAK 300 (330)
Q Consensus 237 ~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~ 300 (330)
+++++++ ++ .|+.|++||+.+... +..+.+|...|.+++|+|++.+|++|+.||.|++|+
T Consensus 281 ~g~~l~~-g~--~d~~i~vwd~~~~~~-~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 281 SGRLLLA-GY--DDFNCNVWDALKADR-AGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp TSSEEEE-EE--TTSEEEEEETTTCCE-EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCEEEE-EC--CCCeEEEEEcccCcE-eeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 9997554 44 599999999998876 788899999999999999999999999999999995
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.8e-51 Score=339.50 Aligned_cols=294 Identities=20% Similarity=0.229 Sum_probs=238.3
Q ss_pred CCcccceEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeecee----eccccccccceeeeeecccCCcEEEEEcCCCcE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLR----VGKNINLNFSCNDVAWSCIEENHIATGATNGAV 76 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 76 (330)
.|.+.|.+++|+|||++++++ |+++++||............+ ..........|.+++|+| + +.|++|+.||.|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d-~~l~~~s~dg~v 105 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVG-E-RGILVASDSGAV 105 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEET-T-TEEEEEETTSEE
T ss_pred cccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeC-C-CeEEEEECCCEE
Confidence 467889999999999998777 989999974321111110100 011122234589999998 5 578899999999
Q ss_pred EEEECCCCCCCce-eEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcE
Q psy6213 77 VVWNLGQISRSKQ-ERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYA 155 (330)
Q Consensus 77 ~iw~~~~~~~~~~-~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 155 (330)
++||+.+.+.... .....+|...|.+++|+| ++++|++|+.|++|++||+++++.+..+.+|...|.+++|+|++..+
T Consensus 106 ~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~ 184 (344)
T 4gqb_B 106 ELWELDENETLIVSKFCKYEHDDIVSTVSVLS-SGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSV 184 (344)
T ss_dssp EEEEECTTSSCEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTE
T ss_pred EEEeccCCCceeEeeccccCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCc
Confidence 9999987332222 223458999999999999 89999999999999999999999999999999999999999999878
Q ss_pred EEEEecCCcEEEEecCCCccceeeec--cCCCCeEEEEEcCC-CCEEEEEecCCcEEEEeCCCCccccceeccccceEEE
Q psy6213 156 FASVSENGTIQQWDVRRPEKCFYQFT--AHSGPIFACDWHPE-HAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRI 232 (330)
Q Consensus 156 ~~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~ 232 (330)
+++++.|++|++||+++ .++...+. .+...+.+++|+|+ +++|++|+.||.|++||+++++.+.....|...|+++
T Consensus 185 l~s~s~D~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v 263 (344)
T 4gqb_B 185 FLSCSEDNRILLWDTRC-PKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGL 263 (344)
T ss_dssp EEEEETTSCEEEEETTS-SSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEE
T ss_pred eeeeccccccccccccc-cceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEE
Confidence 99999999999999998 44454443 45567999999994 5789999999999999999998888888899999999
Q ss_pred EEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCC-EEEEeecCCeEeeeeccc
Q psy6213 233 KWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQ-LFIASSRVSIIPRAKNIK 303 (330)
Q Consensus 233 ~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iw~~~~ 303 (330)
+|+|++..++++++ .|+.|++||+++++ +..+.+|.+.|++++|+|+++ +|++++.||+|++|+...
T Consensus 264 ~fsp~g~~~lasgs--~D~~i~vwd~~~~~--~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 264 VFSPHSVPFLASLS--EDCSLAVLDSSLSE--LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp EECSSSSCCEEEEE--TTSCEEEECTTCCE--EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred EEccCCCeEEEEEe--CCCeEEEEECCCCc--EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 99999976678777 79999999999875 456789999999999999876 577999999999997643
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=9.6e-50 Score=332.44 Aligned_cols=284 Identities=18% Similarity=0.236 Sum_probs=246.4
Q ss_pred CCcccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|.++|++++|+|+++++++| ||.|++||..+++....+..+.. .|.+++|+| ++..+++|+.|+.+++|
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~-------~v~~~~~sp-~g~~lasg~~d~~i~v~ 133 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCT-------WVMACAYAP-SGCAIACGGLDNKCSVY 133 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS-------CCCEEEECT-TSSEEEEESTTSEEEEE
T ss_pred CCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCC-------CEEEEEECC-CCCEEEEeeCCCCEEEE
Confidence 599999999999999995544 99999999998877665554432 368999999 99999999999999999
Q ss_pred ECCCCC---CCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCC--CCc
Q psy6213 80 NLGQIS---RSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPH--SPY 154 (330)
Q Consensus 80 ~~~~~~---~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~--~~~ 154 (330)
++.... .......+..|...|.+++|+| ++..|++++.|++|++||+++++.+..+.+|...|.+++|+|+ +.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~- 211 (354)
T 2pbi_B 134 PLTFDKNENMAAKKKSVAMHTNYLSACSFTN-SDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGN- 211 (354)
T ss_dssp ECCCCTTCCSGGGCEEEEECSSCEEEEEECS-SSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCC-
T ss_pred EEeccccccccccceeeeccCCcEEEEEEeC-CCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCC-
Confidence 986521 1234566778999999999998 8899999999999999999999999999999999999999885 44
Q ss_pred EEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceec--cccceEEE
Q psy6213 155 AFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSIN--TIASVSRI 232 (330)
Q Consensus 155 ~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~v~~~ 232 (330)
.|++|+.||.|++||+++ .+++..+..|...|.+++|+|++.+|++++.|+.|++||++..+....... ....+.++
T Consensus 212 ~l~sgs~Dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~ 290 (354)
T 2pbi_B 212 TFVSGGCDKKAMVWDMRS-GQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSV 290 (354)
T ss_dssp EEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEE
T ss_pred EEEEEeCCCeEEEEECCC-CcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEE
Confidence 799999999999999998 667888899999999999999999999999999999999988754333222 23578999
Q ss_pred EEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeee
Q psy6213 233 KWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAK 300 (330)
Q Consensus 233 ~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~ 300 (330)
+|+|++++++ +++ .|+.|++||+.++.. +..+.+|...|.+++|+|++++|++++.||.|++|.
T Consensus 291 ~~s~~g~~l~-~g~--~d~~i~vwd~~~~~~-~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 291 DFSLSGRLLF-AGY--NDYTINVWDVLKGSR-VSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EECTTSSEEE-EEE--TTSCEEEEETTTCSE-EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEeCCCCEEE-EEE--CCCcEEEEECCCCce-EEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 9999999744 454 599999999988876 778899999999999999999999999999999994
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.6e-49 Score=324.51 Aligned_cols=282 Identities=18% Similarity=0.263 Sum_probs=242.9
Q ss_pred CCcccceEEEEeeCCCee-ecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLA-QPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~-~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|.++|++++|+|+++++ +++ ||.|++||+++++....+..+. .+|.+++|+| ++++|++|+.|+.|++|
T Consensus 11 ~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~-------~~v~~~~~~~-~~~~l~s~s~d~~i~vw 82 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTE-------TPVRAGKFIA-RKNWIIVGSDDFRIRVF 82 (304)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCS-------SCEEEEEEEG-GGTEEEEEETTSEEEEE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccC-------CcEEEEEEeC-CCCEEEEECCCCEEEEE
Confidence 489999999999999994 445 9999999999988776655443 2368999999 99999999999999999
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecC-ceeeeeecCCCCeEEEEEcCCCCcEEEE
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQ-ESTKIFHSNTESVRDVEFNPHSPYAFAS 158 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 158 (330)
|+.+ .+....+.+|...|.+++|+| ++.+|++|+.|++|++||++++ .....+.+|...|.+++|+|.+..++++
T Consensus 83 d~~~---~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s 158 (304)
T 2ynn_A 83 NYNT---GEKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFAS 158 (304)
T ss_dssp ETTT---CCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEE
T ss_pred ECCC---CcEEEEEeCCCCcEEEEEEcC-CCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEE
Confidence 9988 778888999999999999999 8899999999999999999887 4456788899999999999965447999
Q ss_pred EecCCcEEEEecCCCccceeeeccCCCCeEEEEEcC--CCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcC
Q psy6213 159 VSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHP--EHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRP 236 (330)
Q Consensus 159 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~ 236 (330)
|+.|+.|++||+++..........|...+..+.|+| ++.+|++++.|+.|++||+++++.......|...|.+++|+|
T Consensus 159 gs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p 238 (304)
T 2ynn_A 159 GCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHP 238 (304)
T ss_dssp EETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECS
T ss_pred EeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECC
Confidence 999999999999875444444456778899999987 778999999999999999999877777888999999999999
Q ss_pred CCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCC--EEEEeecCCeEeeee
Q psy6213 237 QRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQ--LFIASSRVSIIPRAK 300 (330)
Q Consensus 237 ~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~l~s~~~dg~i~iw~ 300 (330)
+++. +++++ .||.|++||+++.+. ...+..|...+.+++|+|++. ++++|+.|| +.+|.
T Consensus 239 ~~~~-l~s~s--~Dg~i~iWd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~ 299 (304)
T 2ynn_A 239 TLPI-IISGS--EDGTLKIWNSSTYKV-EKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLS 299 (304)
T ss_dssp SSSE-EEEEE--TTSCEEEEETTTCCE-EEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEE
T ss_pred CCCE-EEEEc--CCCeEEEEECCCCce-eeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEE
Confidence 9996 56666 699999999998876 788889999999999999775 577777666 55554
No 7
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.1e-50 Score=341.44 Aligned_cols=289 Identities=18% Similarity=0.269 Sum_probs=246.0
Q ss_pred CCcccceEEEEeeCCCeeec-C-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQP-S-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~-g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|.++|++++|+|+++++++ + |++|+|||+.+++....+..+... |.+++|+| ++++|++|+.|+.+++|
T Consensus 64 gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~-------v~~~~~s~-~g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 64 GHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPW-------VMECAFAP-NGQSVACGGLDSACSIF 135 (380)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTT-------CCCCEECT-TSSEEEECCSSSCCEEE
T ss_pred ccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCC-------EEEEEECC-CCCEEEEeeCCCcEEEE
Confidence 59999999999999999554 4 999999999998877766655433 58999999 99999999999999999
Q ss_pred ECCCCC----CCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeee-----ecCCCCeEEEEEcC
Q psy6213 80 NLGQIS----RSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIF-----HSNTESVRDVEFNP 150 (330)
Q Consensus 80 ~~~~~~----~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-----~~~~~~v~~~~~~~ 150 (330)
++.... .......+.+|.+.+.++.|.|.++..|++|+.|++|++||+++++.+..+ .+|...|.+++|++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred ECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 987521 123445678999999999999966778999999999999999999888776 56888999999988
Q ss_pred CCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceecc-----
Q psy6213 151 HSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINT----- 225 (330)
Q Consensus 151 ~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----- 225 (330)
.+..++++|+.|+.|++||++.....+..+.+|.+.|.+++|+|++++|++++.||+|++||+++++.......+
T Consensus 216 ~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~ 295 (380)
T 3iz6_a 216 LNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRND 295 (380)
T ss_dssp SSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSC
T ss_pred CCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccc
Confidence 544489999999999999998656778889999999999999999999999999999999999988554333221
Q ss_pred --ccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEe----ecCCCCeEEEEEecCCCEEEEeecCCeEeee
Q psy6213 226 --IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASF----TEHKDVVSGLAWRGDPQLFIASSRVSIIPRA 299 (330)
Q Consensus 226 --~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 299 (330)
...+.+++|+|+|++++++ + .||.|++||+..++. ...+ .+|.+.|.+++|+|+|++|++|+.||.|++|
T Consensus 296 ~~~~~v~~~~~s~~g~~l~~g-~--~dg~i~vwd~~~~~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW 371 (380)
T 3iz6_a 296 NELPIVTSVAFSISGRLLFAG-Y--SNGDCYVWDTLLAEM-VLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIW 371 (380)
T ss_dssp CSSCSCSEEEECSSSSEEEEE-C--TTSCEEEEETTTCCE-EEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEE
T ss_pred cccCceEEEEECCCCCEEEEE-E--CCCCEEEEECCCCce-EEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEE
Confidence 2348999999999975554 4 599999999988765 4444 6799999999999999999999999999999
Q ss_pred ecc
Q psy6213 300 KNI 302 (330)
Q Consensus 300 ~~~ 302 (330)
+..
T Consensus 372 ~~~ 374 (380)
T 3iz6_a 372 AFS 374 (380)
T ss_dssp ECC
T ss_pred ecC
Confidence 754
No 8
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.4e-49 Score=330.27 Aligned_cols=291 Identities=20% Similarity=0.294 Sum_probs=233.8
Q ss_pred CCcccceEEEEeeCCCeeecC--------CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCC
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--------RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATN 73 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 73 (330)
.|.+.|++++|+|||++|+++ |+.+++|+..++.....+... ...+...|.+++|+| ++. +++++.|
T Consensus 40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~---~~~~~~~V~~~~~s~-d~~-~l~~s~d 114 (357)
T 4g56_B 40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTA---GVQTEAGVTDVAWVS-EKG-ILVASDS 114 (357)
T ss_dssp CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSE---EEECSSCEEEEEEET-TTE-EEEEETT
T ss_pred cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecc---cCCCCCCEEEEEEcC-CCC-EEEEECC
Confidence 599999999999999996555 357888887776543322211 122334579999999 665 5567789
Q ss_pred CcEEEEECCCCCCCc-eeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCC
Q psy6213 74 GAVVVWNLGQISRSK-QERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHS 152 (330)
Q Consensus 74 g~i~iw~~~~~~~~~-~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 152 (330)
|.|++||+.+.+... ......+|...|.+++|+| ++++|++|+.|+.|++||+++++.+..+..|...|.+++|+|++
T Consensus 115 g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~ 193 (357)
T 4g56_B 115 GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGK 193 (357)
T ss_dssp SCEEEC--------CCCCEEECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTC
T ss_pred CEEEEeeccccceeEEEeeccCCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCC
Confidence 999999998732211 2233457999999999999 89999999999999999999999999999999999999999998
Q ss_pred CcEEEEEecCCcEEEEecCCCcccee--eeccCCCCeEEEEEcCC-CCEEEEEecCCcEEEEeCCCCccccceeccccce
Q psy6213 153 PYAFASVSENGTIQQWDVRRPEKCFY--QFTAHSGPIFACDWHPE-HAWLATASRDKTIKVWDLSIKPSLEYSINTIASV 229 (330)
Q Consensus 153 ~~~~~~~~~dg~i~i~d~~~~~~~~~--~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v 229 (330)
+.++++++.||.|++||++++. +.. ....+...+.+++|+|+ +.+|++|+.|+.|++||+++++.......+...|
T Consensus 194 ~~~~~s~~~dg~v~~wd~~~~~-~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v 272 (357)
T 4g56_B 194 DTIFLSCGEDGRILLWDTRKPK-PATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNI 272 (357)
T ss_dssp SSCEEEEETTSCEEECCTTSSS-CBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCE
T ss_pred CceeeeeccCCceEEEECCCCc-eeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeE
Confidence 7779999999999999999843 333 33457788999999997 5689999999999999999987777777888999
Q ss_pred EEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEec-CCCEEEEeecCCeEeeeeccc
Q psy6213 230 SRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRG-DPQLFIASSRVSIIPRAKNIK 303 (330)
Q Consensus 230 ~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg~i~iw~~~~ 303 (330)
++++|+|++..++++++ .|+.|++||+++++. + ...+|.+.|++++|+| ++.+|++++.||.|++|+...
T Consensus 273 ~~l~~sp~~~~~lasgs--~D~~i~iwd~~~~~~-~-~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 273 TGLAYSYHSSPFLASIS--EDCTVAVLDADFSEV-F-RDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp EEEEECSSSSCCEEEEE--TTSCEEEECTTSCEE-E-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred EEEEEcCCCCCEEEEEe--CCCEEEEEECCCCcE-e-EECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 99999999876688777 799999999998764 3 4458999999999999 899999999999999998643
No 9
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-48 Score=324.07 Aligned_cols=291 Identities=17% Similarity=0.278 Sum_probs=236.9
Q ss_pred CCcc-cceEEEEeeCCCeeec-C-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEE
Q psy6213 2 AYLS-PVHKHGLKADNGLAQP-S-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVV 78 (330)
Q Consensus 2 ~H~~-~v~~~~~s~~~~~~~~-g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 78 (330)
+|.+ .|++++|+|+|+++++ + |+.|+|||++++......... ..+...|.+++|+| ++++|++|+.|+.+++
T Consensus 13 ~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~----~~h~~~v~~~~~sp-~g~~l~s~s~D~~v~i 87 (345)
T 3fm0_A 13 AHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLS----EGHQRTVRKVAWSP-CGNYLASASFDATTCI 87 (345)
T ss_dssp CSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEEC----SSCSSCEEEEEECT-TSSEEEEEETTSCEEE
T ss_pred CCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeec----cccCCcEEEEEECC-CCCEEEEEECCCcEEE
Confidence 5777 9999999999999554 4 999999999887543322111 12344579999999 9999999999999999
Q ss_pred EECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCc---eeeeeecCCCCeEEEEEcCCCCcE
Q psy6213 79 WNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQE---STKIFHSNTESVRDVEFNPHSPYA 155 (330)
Q Consensus 79 w~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~ 155 (330)
|+.... .......+.+|...|.+++|+| ++++|++|+.|+.|++||++++. .+..+..|...|.+++|+|+++ +
T Consensus 88 w~~~~~-~~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-~ 164 (345)
T 3fm0_A 88 WKKNQD-DFECVTTLEGHENEVKSVAWAP-SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQE-L 164 (345)
T ss_dssp EEECCC--EEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSS-C
T ss_pred EEccCC-CeEEEEEccCCCCCceEEEEeC-CCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCC-E
Confidence 998762 2356678889999999999999 89999999999999999998764 3566778999999999999998 5
Q ss_pred EEEEecCCcEEEEecCCCc-cceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccc---------------
Q psy6213 156 FASVSENGTIQQWDVRRPE-KCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSL--------------- 219 (330)
Q Consensus 156 ~~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--------------- 219 (330)
|++++.|+.|++||.+... .+...+.+|...|.+++|+|++++|++++.|+.|++||.......
T Consensus 165 l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~ 244 (345)
T 3fm0_A 165 LASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCI 244 (345)
T ss_dssp EEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEE
T ss_pred EEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcccee
Confidence 9999999999999998743 245678899999999999999999999999999999997433111
Q ss_pred cce-eccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCc---c-----ceEeecCCCCeEEEEEecCC-CEEEE
Q psy6213 220 EYS-INTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYI---P-----LASFTEHKDVVSGLAWRGDP-QLFIA 289 (330)
Q Consensus 220 ~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~---~-----~~~~~~~~~~v~~~~~~~~~-~~l~s 289 (330)
... ..|...|.+++|+|++..+++++ .|+.|++|+...... + .....+|...|++++|+|++ .+|++
T Consensus 245 ~~~~~~h~~~v~~v~~~~~~~~l~s~~---~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS 321 (345)
T 3fm0_A 245 CTLSGFHSRTIYDIAWCQLTGALATAC---GDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLAS 321 (345)
T ss_dssp EEECSSCSSCEEEEEECTTTCCEEEEE---TTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEE
T ss_pred EEecCCCCCcEEEEEEecCCCEEEEEe---CCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEE
Confidence 011 12667899999999999755554 599999999875432 1 12235799999999999987 59999
Q ss_pred eecCCeEeeeeccc
Q psy6213 290 SSRVSIIPRAKNIK 303 (330)
Q Consensus 290 ~~~dg~i~iw~~~~ 303 (330)
|+.||.|++|+...
T Consensus 322 ~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 322 CSDDGEVAFWKYQR 335 (345)
T ss_dssp EETTSCEEEEEECC
T ss_pred cCCCCcEEEEEecC
Confidence 99999999998653
No 10
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.3e-48 Score=327.92 Aligned_cols=290 Identities=19% Similarity=0.289 Sum_probs=243.9
Q ss_pred CCcccceEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccc-----------cccccceeeeeecccCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKN-----------INLNFSCNDVAWSCIEENHIAT 69 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~-----------~~~~~~v~~~~~~~~~~~~l~~ 69 (330)
.|.+.|++++|+|||+++++| ++.+++|++.+++....+..+.... ......|.+++|+| ++++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~-dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP-DGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECT-TSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECC-CCCEEEE
Confidence 489999999999999998888 9999999999988776654332110 01122378999999 9999999
Q ss_pred EcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEc
Q psy6213 70 GATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFN 149 (330)
Q Consensus 70 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 149 (330)
|+.|+.|++||+.+ .+....+.+|...|.+++|+| ++++|++++.|++|++||+++++....+. +...+.+++|+
T Consensus 141 ~~~d~~i~iwd~~~---~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~ 215 (393)
T 1erj_A 141 GAEDRLIRIWDIEN---RKIVMILQGHEQDIYSLDYFP-SGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVS 215 (393)
T ss_dssp EETTSCEEEEETTT---TEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEEC
T ss_pred EcCCCeEEEEECCC---CcEEEEEccCCCCEEEEEEcC-CCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEE
Confidence 99999999999988 778888999999999999998 88999999999999999999998887776 56789999999
Q ss_pred C-CCCcEEEEEecCCcEEEEecCCCccceeee-------ccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcc---
Q psy6213 150 P-HSPYAFASVSENGTIQQWDVRRPEKCFYQF-------TAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPS--- 218 (330)
Q Consensus 150 ~-~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~-------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--- 218 (330)
| ++. ++++++.||.|++||+++ +..+..+ .+|...|.+++|+|++++|++++.|+.|++||++....
T Consensus 216 ~~~~~-~l~~~s~d~~v~iwd~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~ 293 (393)
T 1erj_A 216 PGDGK-YIAAGSLDRAVRVWDSET-GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSD 293 (393)
T ss_dssp STTCC-EEEEEETTSCEEEEETTT-CCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC--------
T ss_pred CCCCC-EEEEEcCCCcEEEEECCC-CcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCccc
Confidence 9 666 799999999999999987 4444444 57889999999999999999999999999999976422
Q ss_pred ---------ccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEec------C
Q psy6213 219 ---------LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRG------D 283 (330)
Q Consensus 219 ---------~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~------~ 283 (330)
......|...|.+++|+|++++ +++++ .|+.|++||+++++. +..+.+|...|.+++|++ +
T Consensus 294 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~sgs--~D~~v~iwd~~~~~~-~~~l~~h~~~v~~v~~~~~~~~~p~ 369 (393)
T 1erj_A 294 SKTPNSGTCEVTYIGHKDFVLSVATTQNDEY-ILSGS--KDRGVLFWDKKSGNP-LLMLQGHRNSVISVAVANGSSLGPE 369 (393)
T ss_dssp -------CEEEEEECCSSCEEEEEECGGGCE-EEEEE--TTSEEEEEETTTCCE-EEEEECCSSCEEEEEECSSCTTCTT
T ss_pred ccCCCCCcceEEEecccCcEEEEEECCCCCE-EEEEe--CCCeEEEEECCCCeE-EEEECCCCCCEEEEEecCCcCcCCC
Confidence 2334567788999999999997 55555 699999999998876 788999999999999986 6
Q ss_pred CCEEEEeecCCeEeeeeccc
Q psy6213 284 PQLFIASSRVSIIPRAKNIK 303 (330)
Q Consensus 284 ~~~l~s~~~dg~i~iw~~~~ 303 (330)
+++|++|+.||.|++|+..+
T Consensus 370 ~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 370 YNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp CEEEEEEETTSEEEEEEEEE
T ss_pred CCEEEEECCCCcEEECcccc
Confidence 88999999999999997643
No 11
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.6e-47 Score=318.04 Aligned_cols=289 Identities=17% Similarity=0.272 Sum_probs=234.1
Q ss_pred CCcccceEEEE-----ee-CCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCC
Q psy6213 2 AYLSPVHKHGL-----KA-DNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATN 73 (330)
Q Consensus 2 ~H~~~v~~~~~-----s~-~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 73 (330)
.|.+.|++++| ++ +++++++| |++|++||+..++..............+...|.+++|+| ++.++++|+.|
T Consensus 19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~-~~~~l~s~s~D 97 (343)
T 2xzm_R 19 GHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQ-ENCFAISSSWD 97 (343)
T ss_dssp CCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECS-STTEEEEEETT
T ss_pred cchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECC-CCCEEEEEcCC
Confidence 59999999999 76 88885554 999999999764321111111111223345579999999 99999999999
Q ss_pred CcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeee---cCCCCeEEEEEcC
Q psy6213 74 GAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFH---SNTESVRDVEFNP 150 (330)
Q Consensus 74 g~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~~ 150 (330)
+.|++||+.+ .+....+.+|...|.+++|+| ++++|++++.|+.|++||+... ...... .|...|.+++|+|
T Consensus 98 ~~v~lwd~~~---~~~~~~~~~h~~~v~~v~~sp-~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~ 172 (343)
T 2xzm_R 98 KTLRLWDLRT---GTTYKRFVGHQSEVYSVAFSP-DNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSP 172 (343)
T ss_dssp SEEEEEETTS---SCEEEEEECCCSCEEEEEECS-STTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECC
T ss_pred CcEEEEECCC---CcEEEEEcCCCCcEEEEEECC-CCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeeecc
Confidence 9999999988 678888999999999999999 8999999999999999999743 333332 5788999999999
Q ss_pred CCC---------cEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccc
Q psy6213 151 HSP---------YAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEY 221 (330)
Q Consensus 151 ~~~---------~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 221 (330)
++. .++++++.||.|++||.+ ......+.+|...|.+++|+|++++|++++.||.|++||+........
T Consensus 173 ~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~ 250 (343)
T 2xzm_R 173 IMKSANKVQPFAPYFASVGWDGRLKVWNTN--FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQR 250 (343)
T ss_dssp CCCSCSCCCSSCCEEEEEETTSEEEEEETT--TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSE
T ss_pred ccccccccCCCCCEEEEEcCCCEEEEEcCC--CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccce
Confidence 872 369999999999999954 456677889999999999999999999999999999999965544444
Q ss_pred eeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCcc-ceEee-----------cCCCCeEEEEEecCCCEEEE
Q psy6213 222 SINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIP-LASFT-----------EHKDVVSGLAWRGDPQLFIA 289 (330)
Q Consensus 222 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~-~~~~~-----------~~~~~v~~~~~~~~~~~l~s 289 (330)
...+...+.+++|+|++++ ++++. |+.|++||+.+.... ...+. +|...|.+++|+|+|++|++
T Consensus 251 ~~~~~~~v~~v~~sp~~~~-la~~~---d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~s 326 (343)
T 2xzm_R 251 EFDAGSTINQIAFNPKLQW-VAVGT---DQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFA 326 (343)
T ss_dssp EEECSSCEEEEEECSSSCE-EEEEE---SSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEE
T ss_pred eecCCCcEEEEEECCCCCE-EEEEC---CCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEE
Confidence 4445677999999999985 56665 889999999876531 11332 67888999999999999999
Q ss_pred eecCCeEeeeecc
Q psy6213 290 SSRVSIIPRAKNI 302 (330)
Q Consensus 290 ~~~dg~i~iw~~~ 302 (330)
|+.||.|++|+..
T Consensus 327 g~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 327 GFTDGVIRTFSFE 339 (343)
T ss_dssp EETTSEEEEEEEE
T ss_pred ecCCceEEEEEEE
Confidence 9999999999753
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=9.8e-48 Score=315.31 Aligned_cols=283 Identities=21% Similarity=0.351 Sum_probs=242.3
Q ss_pred CCcccceEEEEeeCCCeeec-C-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQP-S-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~-g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|.++|++++|+|+++++++ + ||.|++|+..+++....+..+. ..|.+++|+| ++++|++++.||.|++|
T Consensus 21 gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~-------~~v~~~~~~~-~~~~l~s~~~d~~i~vw 92 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHK-------LGISDVAWSS-DSNLLVSASDDKTLKIW 92 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS-------SCEEEEEECT-TSSEEEEEETTSEEEEE
T ss_pred ccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCC-------CceEEEEEcC-CCCEEEEECCCCEEEEE
Confidence 58999999999999999544 4 9999999999888776655443 3469999999 99999999999999999
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEE
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASV 159 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 159 (330)
|+.+ .+....+..|...|.+++|+| ++++|++|+.|+.|++||+++++.+..+..|..+|.+++|+|+++ +++++
T Consensus 93 d~~~---~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~ 167 (312)
T 4ery_A 93 DVSS---GKCLKTLKGHSNYVFCCNFNP-QSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS-LIVSS 167 (312)
T ss_dssp ETTT---CCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-EEEEE
T ss_pred ECCC---CcEEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCC-EEEEE
Confidence 9988 678888899999999999998 899999999999999999999999999999999999999999998 69999
Q ss_pred ecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccce--EEEEEc-C
Q psy6213 160 SENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASV--SRIKWR-P 236 (330)
Q Consensus 160 ~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v--~~~~~~-~ 236 (330)
+.||.|++||+++..........+...+..++|+|++++|++++.||.|++||+++++.......+.... ....++ +
T Consensus 168 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (312)
T 4ery_A 168 SYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 247 (312)
T ss_dssp ETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECS
T ss_pred eCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeC
Confidence 9999999999998443333344567789999999999999999999999999999886655554443322 223344 5
Q ss_pred CCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEee--cCCeEeeeec
Q psy6213 237 QRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS--RVSIIPRAKN 301 (330)
Q Consensus 237 ~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~--~dg~i~iw~~ 301 (330)
++.+ +++++ .||.|++||+++++. +..+.+|...|.+++|+|++++|++++ .|+.|++|+.
T Consensus 248 ~~~~-l~sg~--~dg~i~vwd~~~~~~-~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 248 GGKW-IVSGS--EDNLVYIWNLQTKEI-VQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKS 310 (312)
T ss_dssp SSCE-EEECC--TTSCEEEEETTTCCE-EEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEEC
T ss_pred CCcE-EEEEC--CCCEEEEEECCCchh-hhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecC
Confidence 6665 66666 699999999998876 888999999999999999999999987 6999999974
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.1e-47 Score=313.02 Aligned_cols=286 Identities=17% Similarity=0.302 Sum_probs=236.8
Q ss_pred CCcccceEEEEeeCC-Ce-eecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEE
Q psy6213 2 AYLSPVHKHGLKADN-GL-AQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVV 78 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~-~~-~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 78 (330)
.|.++|++++|+|++ ++ ++++ |+.|++|++........... .....+...|.+++|+| ++++|++|+.|+.|++
T Consensus 15 gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~--~~~~~h~~~v~~~~~s~-dg~~l~s~s~D~~v~~ 91 (319)
T 3frx_A 15 GHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPV--RSFKGHSHIVQDCTLTA-DGAYALSASWDKTLRL 91 (319)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEE--EEEECCSSCEEEEEECT-TSSEEEEEETTSEEEE
T ss_pred cccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccc--eEEeCCcccEEEEEECC-CCCEEEEEeCCCEEEE
Confidence 599999999999976 66 5555 99999999875332111100 11122344579999999 9999999999999999
Q ss_pred EECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCC-----
Q psy6213 79 WNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSP----- 153 (330)
Q Consensus 79 w~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~----- 153 (330)
||+.+ ++....+.+|...|.+++|+| ++.+|++|+.|++|++||++ ++.+..+.+|...+.+++|+|...
T Consensus 92 wd~~~---~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~ 166 (319)
T 3frx_A 92 WDVAT---GETYQRFVGHKSDVMSVDIDK-KASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDS 166 (319)
T ss_dssp EETTT---TEEEEEEECCSSCEEEEEECT-TSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------C
T ss_pred EECCC---CCeeEEEccCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCc
Confidence 99988 788888999999999999998 89999999999999999996 567778888999999999998532
Q ss_pred cEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEE
Q psy6213 154 YAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIK 233 (330)
Q Consensus 154 ~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~ 233 (330)
..+++++.|+.|++||+++ .+....+.+|...|.+++|+|++++|++++.||.|++||+.+.+.... ......+.+++
T Consensus 167 ~~l~s~~~d~~i~~wd~~~-~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~~v~~~~ 244 (319)
T 3frx_A 167 VTIISAGNDKMVKAWNLNQ-FQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYT-LSAQDEVFSLA 244 (319)
T ss_dssp CEEEEEETTSCEEEEETTT-TEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEE-EECCSCEEEEE
T ss_pred cEEEEEeCCCEEEEEECCc-chhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEE-ecCCCcEEEEE
Confidence 2699999999999999997 566778889999999999999999999999999999999998855443 34457899999
Q ss_pred EcCCCCeEEEEeecccCCeEEEEEccCCCccceEee--------cCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 234 WRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFT--------EHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 234 ~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
|+|++.+ ++++. ++.+++|++..... +..+. .|...+.+++|+|||++|++|+.||.|++|+..
T Consensus 245 ~sp~~~~-la~~~---~~~i~v~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 245 FSPNRYW-LAAAT---ATGIKVFSLDPQYL-VDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp ECSSSSE-EEEEE---TTEEEEEEETTEEE-EEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EcCCCCE-EEEEc---CCCcEEEEeCcCee-eeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 9999997 55555 67799999986543 33332 345679999999999999999999999999753
No 14
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-46 Score=311.29 Aligned_cols=289 Identities=17% Similarity=0.298 Sum_probs=225.0
Q ss_pred CCcccceEEEEeeCCCe-eecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGL-AQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~-~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|.++|++++|+|+ + ++++ |+.|++|++..+.......+. ...+...|.+++|+| ++++|++|+.|+.|++|
T Consensus 12 ~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~---~~~h~~~v~~v~~sp-~~~~las~s~D~~v~iw 85 (330)
T 2hes_X 12 LYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLD---ETAHKKAIRSVAWRP-HTSLLAAGSFDSTVSIW 85 (330)
T ss_dssp CCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEEC---TTCCCSCEEEEEECT-TSSEEEEEETTSCEEEE
T ss_pred cCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEe---cCCccCCEEEEEECC-CCCEEEEEeCCCcEEEE
Confidence 59999999999998 6 5555 999999999875422211110 111344579999999 99999999999999999
Q ss_pred ECCCCC----CCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecC----ceeeeeecCCCCeEEEEEcCC
Q psy6213 80 NLGQIS----RSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQ----ESTKIFHSNTESVRDVEFNPH 151 (330)
Q Consensus 80 ~~~~~~----~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~v~~~~~~~~ 151 (330)
++.... .......+.+|...|.+++|+| ++++|++|+.|++|++||++.. +.+..+.+|...|.+++|+|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp-~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 164 (330)
T 2hes_X 86 AKEESADRTFEMDLLAIIEGHENEVKGVAWSN-DGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPS 164 (330)
T ss_dssp EC-------CCCEEEEEEC----CEEEEEECT-TSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSS
T ss_pred EcccCcCccccceeEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCC
Confidence 985421 2355677889999999999999 8999999999999999999532 456778889999999999999
Q ss_pred CCcEEEEEecCCcEEEEecCCCc-cceeeeccCCCCeEEEEEcCC--CCEEEEEecCCcEEEEeCCCCcc--------cc
Q psy6213 152 SPYAFASVSENGTIQQWDVRRPE-KCFYQFTAHSGPIFACDWHPE--HAWLATASRDKTIKVWDLSIKPS--------LE 220 (330)
Q Consensus 152 ~~~~~~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~--------~~ 220 (330)
+. +|++++.|++|++||.++.. .++..+.+|.+.|.+++|+|+ +.+|++++.|++|++||++.... ..
T Consensus 165 ~~-~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~ 243 (330)
T 2hes_X 165 EA-LLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEA 243 (330)
T ss_dssp SS-EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEE
T ss_pred CC-EEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEee
Confidence 98 69999999999999987632 567788999999999999998 67899999999999999876421 11
Q ss_pred cee-ccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCc-cc-eEeecCCC-CeEEEEEec--CCCEEEEeecCC
Q psy6213 221 YSI-NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYI-PL-ASFTEHKD-VVSGLAWRG--DPQLFIASSRVS 294 (330)
Q Consensus 221 ~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~-~~-~~~~~~~~-~v~~~~~~~--~~~~l~s~~~dg 294 (330)
... .|...|.+++|++++ . +++++ .||.|++||..++.. .. ....+|.. .|.+++|+| ++++|++++.||
T Consensus 244 ~~~~~h~~~v~~v~~s~~~-~-l~s~~--~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg 319 (330)
T 2hes_X 244 ILPDVHKRQVYNVAWGFNG-L-IASVG--ADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDG 319 (330)
T ss_dssp ECCSCCSSCEEEEEECTTS-C-EEEEE--TTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTS
T ss_pred ecccccccceEEEEEcCCC-E-EEEEe--CCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCC
Confidence 122 277899999999776 3 55555 699999999987631 12 23357876 899999999 789999999999
Q ss_pred eEeeeecc
Q psy6213 295 IIPRAKNI 302 (330)
Q Consensus 295 ~i~iw~~~ 302 (330)
.|++|+..
T Consensus 320 ~v~~W~~~ 327 (330)
T 2hes_X 320 IVNFWSLE 327 (330)
T ss_dssp EEEEEEC-
T ss_pred cEEEEEec
Confidence 99999754
No 15
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.9e-46 Score=333.01 Aligned_cols=292 Identities=16% Similarity=0.245 Sum_probs=233.8
Q ss_pred CCcccceEEEEeeCCCeeec-C-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQP-S-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~-g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|.+.|++++|+|||+++++ + |+.|++||+.+++....+.........+...|.+++|+| ++++|++++.|+.|++|
T Consensus 188 ~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s~s~D~~v~lW 266 (611)
T 1nr0_A 188 EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASASADKTIKIW 266 (611)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEETTSEEEEE
T ss_pred cccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECC-CCCEEEEEeCCCeEEEE
Confidence 58999999999999999554 4 999999999988876655311111113455689999999 99999999999999999
Q ss_pred ECCCCCCC----------------------------------------ceeEEecccccceeEEEEEecCCCEEEEEecC
Q psy6213 80 NLGQISRS----------------------------------------KQERVFNDHKRTVNKVSFHYVESNWLISGSQD 119 (330)
Q Consensus 80 ~~~~~~~~----------------------------------------~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d 119 (330)
|+.+.... .....+.+|...|.+++|+| ++++|++++.|
T Consensus 267 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~sp-dg~~l~s~s~D 345 (611)
T 1nr0_A 267 NVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSA-DGKTLFSADAE 345 (611)
T ss_dssp ETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETT
T ss_pred eCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeC-CCCEEEEEeCC
Confidence 99762110 12234567999999999999 99999999999
Q ss_pred CcEEEEEeecCceeeee-e-------------------------------------------------------------
Q psy6213 120 GTMRLFDIRCQESTKIF-H------------------------------------------------------------- 137 (330)
Q Consensus 120 ~~i~i~d~~~~~~~~~~-~------------------------------------------------------------- 137 (330)
++|++||+.+++....+ .
T Consensus 346 ~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 425 (611)
T 1nr0_A 346 GHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDI 425 (611)
T ss_dssp SCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSC
T ss_pred CcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcE
Confidence 99999998765432211 0
Q ss_pred --------------------cCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCcc-ceeeeccCCCCeEEEEEcCCC
Q psy6213 138 --------------------SNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEK-CFYQFTAHSGPIFACDWHPEH 196 (330)
Q Consensus 138 --------------------~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~~~~~ 196 (330)
.+...+.+++|+|+++ ++++|+.|+.|++||+..... .... ..|...|++++|+|+|
T Consensus 426 ~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~-~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg 503 (611)
T 1nr0_A 426 AVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQ-FVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNG 503 (611)
T ss_dssp EEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSC-EEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTS
T ss_pred EEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCC-EEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCC
Confidence 0223467899999998 699999999999999986322 1233 6799999999999999
Q ss_pred CEEEEEecCCcEEEEeCCC-Cccccc--eeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccc-eEeecC-
Q psy6213 197 AWLATASRDKTIKVWDLSI-KPSLEY--SINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPL-ASFTEH- 271 (330)
Q Consensus 197 ~~l~~~~~dg~i~i~d~~~-~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~-~~~~~~- 271 (330)
++|++++.|+.|++||+.+ ++.... ...|...|.+++|+|++++ +++++ .|+.|++||+.++.... ..+.+|
T Consensus 504 ~~las~s~d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~-lasgs--~D~~v~lW~~~~~~~~~~~~~~~h~ 580 (611)
T 1nr0_A 504 AFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVR-LATGS--LDNSVIVWNMNKPSDHPIIIKGAHA 580 (611)
T ss_dssp SEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSE-EEEEE--TTSCEEEEETTCTTSCCEEETTSST
T ss_pred CEEEEEcCCCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCE-EEEEE--CCCcEEEEECCCcccccchhhccCc
Confidence 9999999999999999987 433222 2238899999999999997 55666 69999999998876434 667789
Q ss_pred CCCeEEEEEecCCCEEEEeecCCeEeeeec
Q psy6213 272 KDVVSGLAWRGDPQLFIASSRVSIIPRAKN 301 (330)
Q Consensus 272 ~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~ 301 (330)
...|.+++|+|+++ |++++.|++|++|+.
T Consensus 581 ~~~v~~v~fs~d~~-l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 581 MSSVNSVIWLNETT-IVSAGQDSNIKFWNV 609 (611)
T ss_dssp TSCEEEEEEEETTE-EEEEETTSCEEEEEC
T ss_pred ccCeeEEEEcCCCE-EEEecCCCCEEEEec
Confidence 89999999999998 999999999999975
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.5e-46 Score=333.40 Aligned_cols=284 Identities=17% Similarity=0.207 Sum_probs=242.5
Q ss_pred CcccceEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEEC
Q psy6213 3 YLSPVHKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNL 81 (330)
Q Consensus 3 H~~~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~ 81 (330)
+.+.+.+++|+|||++++++ ++.+++|++.+++....+..|.. .|++++|+| ++++||+|+.||.|+|||+
T Consensus 17 ~~g~~~~~~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~-------~v~~~~~sp-dg~~lasg~~d~~v~lWd~ 88 (611)
T 1nr0_A 17 ARGTAVVLGNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSH-------QTTVAKTSP-SGYYCASGDVHGNVRIWDT 88 (611)
T ss_dssp CTTCCCCCEECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSS-------CEEEEEECT-TSSEEEEEETTSEEEEEES
T ss_pred ccCceeEEeeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCC-------ceEEEEECC-CCcEEEEEeCCCCEEEeEC
Confidence 56788999999999997777 88999999998777666655543 369999999 9999999999999999998
Q ss_pred CCCCCCceeEEecccccceeEEEEEecCCCEEEEEecC----CcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEE
Q psy6213 82 GQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQD----GTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFA 157 (330)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 157 (330)
.+. .......+..|.+.|.+++|+| ++++|++++.+ +.|++|| .++....+.+|...|.+++|+|++++.++
T Consensus 89 ~~~-~~~~~~~~~~~~~~v~~v~fs~-dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~ 164 (611)
T 1nr0_A 89 TQT-THILKTTIPVFSGPVKDISWDS-ESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDFKPSRPFRII 164 (611)
T ss_dssp SST-TCCEEEEEECSSSCEEEEEECT-TSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEECSSSSCEEE
T ss_pred CCC-cceeeEeecccCCceEEEEECC-CCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCceEEEECCCCCeEEE
Confidence 652 1334556788999999999999 88899988865 4688887 46677788999999999999999986799
Q ss_pred EEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcccccee-------ccccceE
Q psy6213 158 SVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI-------NTIASVS 230 (330)
Q Consensus 158 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------~~~~~v~ 230 (330)
+++.|++|++||.++ .+....+.+|...|.+++|+|++++|++++.|+.|++||+.+++...... .|...|.
T Consensus 165 s~s~D~~v~lwd~~~-~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~ 243 (611)
T 1nr0_A 165 SGSDDNTVAIFEGPP-FKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVF 243 (611)
T ss_dssp EEETTSCEEEEETTT-BEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEE
T ss_pred EEeCCCeEEEEECCC-CeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEE
Confidence 999999999999887 66778899999999999999999999999999999999998875543332 6888999
Q ss_pred EEEEcCCCCeEEEEeecccCCeEEEEEccCCCcc------------------------------------------ceEe
Q psy6213 231 RIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIP------------------------------------------LASF 268 (330)
Q Consensus 231 ~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~------------------------------------------~~~~ 268 (330)
+++|+|++++ +++++ .|+.|++||+++++.. ...+
T Consensus 244 ~v~~spdg~~-l~s~s--~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~ 320 (611)
T 1nr0_A 244 GLTWSPDGTK-IASAS--ADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVR 320 (611)
T ss_dssp EEEECTTSSE-EEEEE--TTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEE
T ss_pred EEEECCCCCE-EEEEe--CCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEE
Confidence 9999999997 55555 6999999999875431 2234
Q ss_pred ecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 269 TEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 269 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
.+|...|++++|+|++++|++++.|+.|++|+..
T Consensus 321 ~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~ 354 (611)
T 1nr0_A 321 YGHNKAITALSSSADGKTLFSADAEGHINSWDIS 354 (611)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred cCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECC
Confidence 5799999999999999999999999999999864
No 17
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.4e-45 Score=305.39 Aligned_cols=250 Identities=18% Similarity=0.252 Sum_probs=213.5
Q ss_pred CcccceEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEEC
Q psy6213 3 YLSPVHKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNL 81 (330)
Q Consensus 3 H~~~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~ 81 (330)
|...|.+++|+|++.+++++ ||.|+|||+++++......... ..+...|++++|+| ++++|++|+.||.|++||+
T Consensus 81 ~~~~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~---~~H~~~V~~v~~sp-dg~~l~sgs~d~~i~iwd~ 156 (344)
T 4gqb_B 81 TEAGVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCK---YEHDDIVSTVSVLS-SGTQAVSGSKDICIKVWDL 156 (344)
T ss_dssp ESSCEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEE---ECCSSCEEEEEECT-TSSEEEEEETTSCEEEEET
T ss_pred cCCCEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccc---cCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEEC
Confidence 56789999999998777777 9999999999987654433221 12344579999999 9999999999999999999
Q ss_pred CCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeee--cCCCCeEEEEEcCCCCcEEEEE
Q psy6213 82 GQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFH--SNTESVRDVEFNPHSPYAFASV 159 (330)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~ 159 (330)
.+ .+.+..+.+|...|.+++|+|.+..+|++++.|++|++||+++++....+. .+...+.+++|+|++..++++|
T Consensus 157 ~~---~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg 233 (344)
T 4gqb_B 157 AQ---QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFG 233 (344)
T ss_dssp TT---TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEE
T ss_pred CC---CcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEe
Confidence 88 788899999999999999999556789999999999999999998887764 3456799999999877789999
Q ss_pred ecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCC-CEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcCCC
Q psy6213 160 SENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEH-AWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQR 238 (330)
Q Consensus 160 ~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 238 (330)
+.||.|++||+++ .+++..+.+|...|++++|+|++ ++|++++.|++|++||+++++ +.....|...|.+++|+|++
T Consensus 234 ~~dg~v~~wd~~~-~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~-~~~~~~H~~~V~~v~~sp~~ 311 (344)
T 4gqb_B 234 DENGTVSLVDTKS-TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE-LFRSQAHRDFVRDATWSPLN 311 (344)
T ss_dssp ETTSEEEEEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE-EEEECCCSSCEEEEEECSSS
T ss_pred ccCCcEEEEECCC-CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc-EEEEcCCCCCEEEEEEeCCC
Confidence 9999999999998 67788899999999999999998 579999999999999999884 44567789999999999999
Q ss_pred CeEEEEeecccCCeEEEEEccCCCc
Q psy6213 239 KFHLASCSLVVDSSVNVWDIRRPYI 263 (330)
Q Consensus 239 ~~l~~~~~~~~~~~i~i~d~~~~~~ 263 (330)
+.++++++ .|++|++|++.+...
T Consensus 312 ~~llas~s--~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 312 HSLLTTVG--WDHQVVHHVVPTEPL 334 (344)
T ss_dssp TTEEEEEE--TTSCEEEEECCC---
T ss_pred CeEEEEEc--CCCeEEEEECCCCCC
Confidence 98888888 799999999987643
No 18
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-44 Score=301.84 Aligned_cols=283 Identities=13% Similarity=0.205 Sum_probs=246.4
Q ss_pred CCcccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|.++|++++|+|++++++++ ||.|++||+.+++....+..+.. .|.+++|+| ++++|++++.||.|++|
T Consensus 30 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~-------~v~~~~~~~-~~~~l~s~~~dg~i~iw 101 (369)
T 3zwl_B 30 GHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTG-------TIWSIDVDC-FTKYCVTGSADYSIKLW 101 (369)
T ss_dssp CCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSS-------CEEEEEECT-TSSEEEEEETTTEEEEE
T ss_pred EeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCC-------cEEEEEEcC-CCCEEEEEeCCCeEEEE
Confidence 599999999999999995554 99999999999887776654433 369999999 99999999999999999
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecC-----CcEEEEEeecCce-----------eeeeecCCC--
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQD-----GTMRLFDIRCQES-----------TKIFHSNTE-- 141 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~-----------~~~~~~~~~-- 141 (330)
|+.+ .+....+. +...+.+++|+| ++.++++++.+ +.|++||+..... ...+..+..
T Consensus 102 d~~~---~~~~~~~~-~~~~v~~~~~~~-~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (369)
T 3zwl_B 102 DVSN---GQCVATWK-SPVPVKRVEFSP-CGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLD 176 (369)
T ss_dssp ETTT---CCEEEEEE-CSSCEEEEEECT-TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCC
T ss_pred ECCC---CcEEEEee-cCCCeEEEEEcc-CCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCcc
Confidence 9988 66666666 889999999998 89999999998 9999999987643 334444555
Q ss_pred CeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccc
Q psy6213 142 SVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEY 221 (330)
Q Consensus 142 ~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 221 (330)
.+.+++|+|+++ .+++++.||.|++||+++.......+..|...|.+++|+|++++|++++.||.|++||+++.+...
T Consensus 177 ~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~- 254 (369)
T 3zwl_B 177 AATVAGWSTKGK-YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK- 254 (369)
T ss_dssp CEEEEEECGGGC-EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE-
T ss_pred ceeEEEEcCCCC-EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceee-
Confidence 899999999998 689999999999999998667788888999999999999999999999999999999999885443
Q ss_pred eeccccceEEEEEcCCCCeEEEEeecccCC--------------eEEEEEccCCCccceEeecCCCCeEEEEEecCCCEE
Q psy6213 222 SINTIASVSRIKWRPQRKFHLASCSLVVDS--------------SVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLF 287 (330)
Q Consensus 222 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~--------------~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 287 (330)
...+...+..++|+|+++++++++. ++ .+++||+.+++. +..+.+|...|.+++|+|++++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l 330 (369)
T 3zwl_B 255 KYETDCPLNTAVITPLKEFIILGGG---QEAKDVTTTSANEGKFEARFYHKIFEEE-IGRVQGHFGPLNTVAISPQGTSY 330 (369)
T ss_dssp EEECSSCEEEEEECSSSSEEEEEEC---CC-------------CEEEEEETTTCCE-EEEEECCSSCEEEEEECTTSSEE
T ss_pred eecCCCCceeEEecCCCceEEEeec---CCCceEEEEecCCCcceeEEEecCCCcc-hhheecccCcEEEEEECCCCCEE
Confidence 3447789999999999998666665 66 899999998876 78889999999999999999999
Q ss_pred EEeecCCeEeeeeccc
Q psy6213 288 IASSRVSIIPRAKNIK 303 (330)
Q Consensus 288 ~s~~~dg~i~iw~~~~ 303 (330)
++++.||.|++|+...
T Consensus 331 ~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 331 ASGGEDGFIRLHHFEK 346 (369)
T ss_dssp EEEETTSEEEEEEECH
T ss_pred EEEcCCCeEEEEECcc
Confidence 9999999999998654
No 19
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=3.8e-44 Score=296.75 Aligned_cols=286 Identities=13% Similarity=0.184 Sum_probs=243.8
Q ss_pred CCcccceEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWN 80 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~ 80 (330)
.|.++|++++|+|++++++++ ||.|++|++.+++........ ........+.+++|+| ++++|++++.||.|++||
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d 125 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQL--DCLNRDNYIRSCKLLP-DGCTLIVGGEASTLSIWD 125 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEE--ECSCTTSBEEEEEECT-TSSEEEEEESSSEEEEEE
T ss_pred cCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecc--cccCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEEE
Confidence 589999999999999997777 999999999886543322211 1112345579999999 999999999999999999
Q ss_pred CCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEe
Q psy6213 81 LGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVS 160 (330)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (330)
+.+.. ......+..|...+.+++|+| +++++++++.||.|++||+++++.+..+..|...+.+++|+|+++ .+++++
T Consensus 126 ~~~~~-~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~ 202 (337)
T 1gxr_A 126 LAAPT-PRIKAELTSSAPACYALAISP-DSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGT-KLWTGG 202 (337)
T ss_dssp CCCC---EEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEE
T ss_pred CCCCC-cceeeecccCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCC-EEEEEe
Confidence 98721 235667788999999999998 899999999999999999999999999999999999999999998 699999
Q ss_pred cCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCe
Q psy6213 161 ENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKF 240 (330)
Q Consensus 161 ~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 240 (330)
.||.|++||+++ .+....+ .+...+.+++|+|+++++++++.|+.|++||+++.+ ......+...+.+++|+|++++
T Consensus 203 ~dg~i~~~d~~~-~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~ 279 (337)
T 1gxr_A 203 LDNTVRSWDLRE-GRQLQQH-DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPD-KYQLHLHESCVLSLKFAYCGKW 279 (337)
T ss_dssp TTSEEEEEETTT-TEEEEEE-ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSC-EEEECCCSSCEEEEEECTTSSE
T ss_pred cCCcEEEEECCC-CceEeee-cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCC-eEEEcCCccceeEEEECCCCCE
Confidence 999999999997 4545554 477889999999999999999999999999999874 4455667889999999999997
Q ss_pred EEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeec
Q psy6213 241 HLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKN 301 (330)
Q Consensus 241 l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~ 301 (330)
++ +++ .||.|++||+.+++. + ....|...|.+++|+|++++|++++.||.|++|+.
T Consensus 280 l~-~~~--~dg~i~~~~~~~~~~-~-~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 280 FV-STG--KDNLLNAWRTPYGAS-I-FQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EE-EEE--TTSEEEEEETTTCCE-E-EEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EE-Eec--CCCcEEEEECCCCeE-E-EEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 54 555 599999999998875 3 34567889999999999999999999999999974
No 20
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.2e-44 Score=294.13 Aligned_cols=240 Identities=20% Similarity=0.349 Sum_probs=216.4
Q ss_pred ceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCce
Q psy6213 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQES 132 (330)
Q Consensus 53 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (330)
.|.+++|+| ++++|++|+.||.|++||+.+ ......+..|..+|.+++|+| ++++|++|+.|+.|++||+++++.
T Consensus 15 ~V~~~~fsp-~~~~l~s~~~dg~v~lWd~~~---~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~s~d~~i~vwd~~~~~~ 89 (304)
T 2ynn_A 15 RVKGIDFHP-TEPWVLTTLYSGRVELWNYET---QVEVRSIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEK 89 (304)
T ss_dssp CEEEEEECS-SSSEEEEEETTSEEEEEETTT---TEEEEEEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCE
T ss_pred ceEEEEECC-CCCEEEEEcCCCcEEEEECCC---CceeEEeeccCCcEEEEEEeC-CCCEEEEECCCCEEEEEECCCCcE
Confidence 479999999 999999999999999999988 778888899999999999998 899999999999999999999999
Q ss_pred eeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcC-CCCEEEEEecCCcEEEE
Q psy6213 133 TKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHP-EHAWLATASRDKTIKVW 211 (330)
Q Consensus 133 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~ 211 (330)
+..+.+|...|.+++|+|+++ ++++|+.|++|++||++++......+.+|...|.+++|+| ++.+|++++.|+.|++|
T Consensus 90 ~~~~~~h~~~v~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iw 168 (304)
T 2ynn_A 90 VVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168 (304)
T ss_dssp EEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEE
T ss_pred EEEEeCCCCcEEEEEEcCCCC-EEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 999999999999999999998 6999999999999999985566778889999999999999 67899999999999999
Q ss_pred eCCCCccccce-eccccceEEEEEcC--CCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEE
Q psy6213 212 DLSIKPSLEYS-INTIASVSRIKWRP--QRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFI 288 (330)
Q Consensus 212 d~~~~~~~~~~-~~~~~~v~~~~~~~--~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 288 (330)
|++........ ..+...+..+.|+| ++++ +++++ .|+.|++||+++++. +..+.+|...|.+++|+|++++|+
T Consensus 169 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-l~s~s--~D~~i~iWd~~~~~~-~~~~~~h~~~v~~~~~~p~~~~l~ 244 (304)
T 2ynn_A 169 SLGQSTPNFTLTTGQERGVNYVDYYPLPDKPY-MITAS--DDLTIKIWDYQTKSC-VATLEGHMSNVSFAVFHPTLPIII 244 (304)
T ss_dssp ETTCSSCSEEEECCCTTCEEEEEECCSTTCCE-EEEEE--TTSEEEEEETTTTEE-EEEEECCSSCEEEEEECSSSSEEE
T ss_pred ECCCCCccceeccCCcCcEEEEEEEEcCCCCE-EEEEc--CCCeEEEEeCCCCcc-ceeeCCCCCCEEEEEECCCCCEEE
Confidence 99877554333 34557899999987 5665 55666 699999999998865 888999999999999999999999
Q ss_pred EeecCCeEeeeecc
Q psy6213 289 ASSRVSIIPRAKNI 302 (330)
Q Consensus 289 s~~~dg~i~iw~~~ 302 (330)
+++.||.|++|+..
T Consensus 245 s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 245 SGSEDGTLKIWNSS 258 (304)
T ss_dssp EEETTSCEEEEETT
T ss_pred EEcCCCeEEEEECC
Confidence 99999999999854
No 21
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.4e-44 Score=320.76 Aligned_cols=275 Identities=24% Similarity=0.355 Sum_probs=240.1
Q ss_pred CCcccceEEEEeeCCCeee-cC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQ-PS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~-~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|.++|.+++|+|++++++ ++ |+.|++||...... ..+.. +...+.+++|+| ++++|++++.||.+++|
T Consensus 301 ~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~-~~~~~-------~~~~v~~~~~s~-~g~~l~~~~~dg~v~~~ 371 (577)
T 2ymu_A 301 GHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHL-QTLTG-------HSSSVWGVAFSP-DGQTIASASDDKTVKLW 371 (577)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEE-EEECC-------CSSCEEEEEECT-TSSEEEEEETTSEEEEE
T ss_pred cCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCee-EEEeC-------CCCCEEEEEECC-CCCEEEEEeCCCEEEEE
Confidence 5889999999999999954 44 99999999876543 22222 233468999999 99999999999999999
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEE
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASV 159 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 159 (330)
+.. .+....+..|...|.+++|+| ++++|++++.|+.|++||. +++.+..+..|...|.+++|+|+++ .++++
T Consensus 372 ~~~----~~~~~~~~~~~~~v~~~~~s~-dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~-~l~~~ 444 (577)
T 2ymu_A 372 NRN----GQLLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQ-TIASA 444 (577)
T ss_dssp ETT----CCEEEEEECCSSCEEEEEECT-TSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSS-EEEEE
T ss_pred cCC----CCEEEEecCCCCCeEEEEECC-CCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCC-EEEEE
Confidence 964 467778889999999999998 8999999999999999996 5778888899999999999999998 69999
Q ss_pred ecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcCCCC
Q psy6213 160 SENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRK 239 (330)
Q Consensus 160 ~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 239 (330)
+.|+.|++||.. .+.+..+.+|...|.+++|+|++++|++++.|+.|++||.. ++.......|...|++++|+|+++
T Consensus 445 ~~d~~v~~w~~~--~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~~~~~~~~h~~~v~~l~~s~dg~ 521 (577)
T 2ymu_A 445 SDDKTVKLWNRN--GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVRGVAFSPDGQ 521 (577)
T ss_dssp ETTSEEEEEETT--SCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SCEEEEEECCSSCEEEEEECTTSS
T ss_pred cCCCEEEEEECC--CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CCEEEEEeCCCCCEEEEEEcCCCC
Confidence 999999999975 45677888999999999999999999999999999999964 446666777889999999999999
Q ss_pred eEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeee
Q psy6213 240 FHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAK 300 (330)
Q Consensus 240 ~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~ 300 (330)
+| ++++ .|+.|++||.. ++. +..+.+|.+.|++++|+||+++|++++.|+.|++|+
T Consensus 522 ~l-~s~~--~dg~v~lwd~~-~~~-~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 522 TI-ASAS--DDKTVKLWNRN-GQL-LQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp CE-EEEE--TTSEEEEECTT-SCE-EEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EE-EEEE--CcCEEEEEeCC-CCE-EEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 84 5555 69999999964 444 788999999999999999999999999999999995
No 22
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-46 Score=316.36 Aligned_cols=292 Identities=14% Similarity=0.239 Sum_probs=244.2
Q ss_pred CCcccceEEEEeeCCCeeecC--CCeEEEEEcCC----cceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCc
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--RNVFKIFLIKD----TEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGA 75 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 75 (330)
.|.+.|++++|+|++++++++ ||.|++|++.. .+....+..+ ...|.+++|+|+++++|++++.||.
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~~~~~~~l~s~~~dg~ 137 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNH-------SSSVKTVKFNAKQDNVLASGGNNGE 137 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCS-------SSCCCEEEECSSSTTBEEEECSSSC
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCC-------ccceEEEEEcCCCCCEEEEEcCCCe
Confidence 588999999999999995555 99999999987 2333333333 3346999999933899999999999
Q ss_pred EEEEECCCCC------CCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecC------CCCe
Q psy6213 76 VVVWNLGQIS------RSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSN------TESV 143 (330)
Q Consensus 76 i~iw~~~~~~------~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~------~~~v 143 (330)
|++||+.+.. ..........|...|.+++|+|+++.+|++++.|+.|++||+++++.+..+..+ ...+
T Consensus 138 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v 217 (416)
T 2pm9_A 138 IFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQL 217 (416)
T ss_dssp EEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCE
T ss_pred EEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCce
Confidence 9999998743 122233346789999999999944899999999999999999999988888766 7889
Q ss_pred EEEEEcCCCCcEEEEEecCC---cEEEEecCCCccceeeec-cCCCCeEEEEEcC-CCCEEEEEecCCcEEEEeCCCCcc
Q psy6213 144 RDVEFNPHSPYAFASVSENG---TIQQWDVRRPEKCFYQFT-AHSGPIFACDWHP-EHAWLATASRDKTIKVWDLSIKPS 218 (330)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~dg---~i~i~d~~~~~~~~~~~~-~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~ 218 (330)
.+++|+|++..++++++.|+ .|++||+++...+...+. +|...|.+++|+| ++++|++++.||.|++||+++++.
T Consensus 218 ~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~ 297 (416)
T 2pm9_A 218 SVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQ 297 (416)
T ss_dssp EEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCE
T ss_pred EEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCcc
Confidence 99999999876899999998 999999998657777887 8999999999999 999999999999999999999877
Q ss_pred ccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceE-------------------------------
Q psy6213 219 LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLAS------------------------------- 267 (330)
Q Consensus 219 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~------------------------------- 267 (330)
......|...+.+++|+|+++.++++++ .|+.|++||+.+.......
T Consensus 298 ~~~~~~~~~~v~~~~~s~~~~~~l~s~~--~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (416)
T 2pm9_A 298 LSQFPARGNWCFKTKFAPEAPDLFACAS--FDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFH 375 (416)
T ss_dssp EEEEECSSSCCCCEEECTTCTTEEEECC--SSSEEEEEESCCCCCSSCC----------------------CCSCCCSSC
T ss_pred ceeecCCCCceEEEEECCCCCCEEEEEe--cCCcEEEEEccCCCCCcccccccccccCCccccccccccccccccccccc
Confidence 7777788899999999999944567776 6999999999876532211
Q ss_pred ---eecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 268 ---FTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 268 ---~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
...|..++.+++|+|+|++|++++.||.|++|+..
T Consensus 376 ~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~ 413 (416)
T 2pm9_A 376 LQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPK 413 (416)
T ss_dssp CCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCC
T ss_pred ccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEec
Confidence 01156788899999999999999999999999754
No 23
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.9e-44 Score=295.74 Aligned_cols=288 Identities=20% Similarity=0.299 Sum_probs=235.3
Q ss_pred CCcccceEEEEeeC-CCee-ecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEE
Q psy6213 2 AYLSPVHKHGLKAD-NGLA-QPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVV 78 (330)
Q Consensus 2 ~H~~~v~~~~~s~~-~~~~-~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 78 (330)
.|.++|++++|+|+ +++| +++ |++|+|||+.+++........ ....+...|.+++|+| ++++|++++.|+.|++
T Consensus 36 GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~--~l~~h~~~V~~~~~s~-dg~~l~s~~~d~~i~~ 112 (340)
T 4aow_A 36 GHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQR--ALRGHSHFVSDVVISS-DGQFALSGSWDGTLRL 112 (340)
T ss_dssp CCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEE--EECCCSSCEEEEEECT-TSSEEEEEETTSEEEE
T ss_pred CccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeE--EEeCCCCCEEEEEECC-CCCEEEEEcccccceE
Confidence 59999999999998 5675 555 999999999876532221111 1122345589999999 9999999999999999
Q ss_pred EECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCce-eeeeecCCCCeEEEEEcCCCC-cEE
Q psy6213 79 WNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQES-TKIFHSNTESVRDVEFNPHSP-YAF 156 (330)
Q Consensus 79 w~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~v~~~~~~~~~~-~~~ 156 (330)
|+... .........+...+....+++ ++.+|++++.|+.+++||...... ......|...+..++|++++. .++
T Consensus 113 ~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 188 (340)
T 4aow_A 113 WDLTT---GTTTRRFVGHTKDVLSVAFSS-DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPII 188 (340)
T ss_dssp EETTT---TEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEE
T ss_pred Eeecc---cceeeeecCCCCceeEEEEee-cCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEE
Confidence 99987 666777777888899999998 889999999999999999876544 334556888999999998764 357
Q ss_pred EEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcC
Q psy6213 157 ASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRP 236 (330)
Q Consensus 157 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~ 236 (330)
++++.|+.|++||+++ .+....+.+|.+.|++++|+|++++|++++.||.|++||+++.+... ...+...+..++|+|
T Consensus 189 ~s~~~d~~i~i~d~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~-~~~~~~~v~~~~~~~ 266 (340)
T 4aow_A 189 VSCGWDKLVKVWNLAN-CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLY-TLDGGDIINALCFSP 266 (340)
T ss_dssp EEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE-EEECSSCEEEEEECS
T ss_pred EEEcCCCEEEEEECCC-CceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceee-eecCCceEEeeecCC
Confidence 8899999999999998 67788889999999999999999999999999999999999885443 444567899999999
Q ss_pred CCCeEEEEeecccCCeEEEEEccCCCcc--------ceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 237 QRKFHLASCSLVVDSSVNVWDIRRPYIP--------LASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 237 ~~~~l~~~~~~~~~~~i~i~d~~~~~~~--------~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
++.. ++++. |+.|++||+++.... .....+|...|++++|+||+++|++|+.||.|++|+..
T Consensus 267 ~~~~-~~~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 267 NRYW-LCAAT---GPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp SSSE-EEEEE---TTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred CCce-eeccC---CCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 9874 66665 999999999876431 12234688899999999999999999999999999754
No 24
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=5.4e-45 Score=305.28 Aligned_cols=288 Identities=15% Similarity=0.260 Sum_probs=240.4
Q ss_pred CCcccceEEEEeeC---CC--eeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccC----CcEEEEEc
Q psy6213 2 AYLSPVHKHGLKAD---NG--LAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIE----ENHIATGA 71 (330)
Q Consensus 2 ~H~~~v~~~~~s~~---~~--~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~~~l~~~~ 71 (330)
.|.++|++++|+|+ +. +++++ ++.|++|++.+++....+..+... .+...|.+++|+| + +.+|++|+
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~-~~~~~~~~l~~~~ 92 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDA--DADENFYTCAWTY-DSNTSHPLLAVAG 92 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECS--CTTCCEEEEEEEE-CTTTCCEEEEEEE
T ss_pred CCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeecccc--CCCCcEEEEEecc-CCCCCCCEEEEec
Confidence 59999999999984 44 36666 889999999988776655544321 2345589999999 6 67999999
Q ss_pred CCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeee---ecCCCCeEEEEE
Q psy6213 72 TNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIF---HSNTESVRDVEF 148 (330)
Q Consensus 72 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~---~~~~~~v~~~~~ 148 (330)
.||.|++||+.+ .+....+..|...|.+++|+|.++++|++++.||.|++||+++++.+..+ ..|...|.+++|
T Consensus 93 ~dg~i~v~d~~~---~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 169 (366)
T 3k26_A 93 SRGIIRIINPIT---MQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADY 169 (366)
T ss_dssp TTCEEEEECTTT---CCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEE
T ss_pred CCCEEEEEEchh---ceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEE
Confidence 999999999988 67788888999999999999877899999999999999999999988887 678999999999
Q ss_pred cCCCCcEEEEEecCCcEEEEecCCCccceeeec----------------------------cCCCCeEEEEEcCCCCEEE
Q psy6213 149 NPHSPYAFASVSENGTIQQWDVRRPEKCFYQFT----------------------------AHSGPIFACDWHPEHAWLA 200 (330)
Q Consensus 149 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~----------------------------~~~~~i~~~~~~~~~~~l~ 200 (330)
+|+++ .+++++.||.|++||+++ .+....+. .|...|.+++|+ +++++
T Consensus 170 ~~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~ 245 (366)
T 3k26_A 170 DLLGE-KIMSCGMDHSLKLWRINS-KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLIL 245 (366)
T ss_dssp CTTSS-EEEEEETTSCEEEEESCS-HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEE
T ss_pred CCCCC-EEEEecCCCCEEEEECCC-CccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEE
Confidence 99998 699999999999999987 33333332 389999999998 77999
Q ss_pred EEecCCcEEEEeCCCCcc--------------ccceeccccceEEEEEcCC--CCeEEEEeecccCCeEEEEEccCCCc-
Q psy6213 201 TASRDKTIKVWDLSIKPS--------------LEYSINTIASVSRIKWRPQ--RKFHLASCSLVVDSSVNVWDIRRPYI- 263 (330)
Q Consensus 201 ~~~~dg~i~i~d~~~~~~--------------~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~~~~i~i~d~~~~~~- 263 (330)
+++.||.|++||+++... ......+...+.+++|+|+ +++ +++++ .||.|++||+.+++.
T Consensus 246 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~-l~~~~--~dg~i~vwd~~~~~~~ 322 (366)
T 3k26_A 246 SKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKM-LALGN--QVGKLYVWDLEVEDPH 322 (366)
T ss_dssp EECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSE-EEEEC--TTSCEEEEECCSSSGG
T ss_pred EEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcE-EEEEe--cCCcEEEEECCCCCCc
Confidence 999999999999987644 3333446678899999999 887 55555 599999999998753
Q ss_pred --cceEeecC--CCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 264 --PLASFTEH--KDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 264 --~~~~~~~~--~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
....+..| ...|.+++|+|++++|++++.||.|++|+..
T Consensus 323 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 323 KAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp GCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred cccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 23466777 7899999999999999999999999999753
No 25
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.6e-44 Score=300.22 Aligned_cols=286 Identities=16% Similarity=0.232 Sum_probs=238.5
Q ss_pred CCcccceEEEEeeCCCe-eecC-----CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccC---CcEEEEEcC
Q psy6213 2 AYLSPVHKHGLKADNGL-AQPS-----RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIE---ENHIATGAT 72 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~-~~~g-----d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~ 72 (330)
.|.++|++++|+|++.. +++| |+.|++||+.+++........ +...|.+++|+| + +++|++|+.
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~------~~~~v~~~~~~~-~~~~~~~l~~~~~ 88 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIE------KAKPIKCGTFGA-TSLQQRYLATGDF 88 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEE------ESSCEEEEECTT-CCTTTCCEEEEET
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeec------ccCcEEEEEEcC-CCCCCceEEEecC
Confidence 48999999999999976 6666 689999999988765443322 233479999999 6 799999999
Q ss_pred CCcEEEEECCCCCCCc-eeEEecccccceeEEEE------EecCCCEEEEEecCCcEEEEEeecCc-eeeeeecCCC---
Q psy6213 73 NGAVVVWNLGQISRSK-QERVFNDHKRTVNKVSF------HYVESNWLISGSQDGTMRLFDIRCQE-STKIFHSNTE--- 141 (330)
Q Consensus 73 dg~i~iw~~~~~~~~~-~~~~~~~~~~~i~~i~~------~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~--- 141 (330)
||.|++||+.+ .+ ....+..|...|.++.| +| ++++|++++.||.|++||+++++ ....+..+..
T Consensus 89 dg~i~iwd~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~s~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 164 (357)
T 3i2n_A 89 GGNLHIWNLEA---PEMPVYSVKGHKEIINAIDGIGGLGIGE-GAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENK 164 (357)
T ss_dssp TSCEEEECTTS---CSSCSEEECCCSSCEEEEEEESGGGCC--CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCC
T ss_pred CCeEEEEeCCC---CCccEEEEEecccceEEEeeccccccCC-CccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCC
Confidence 99999999987 44 67788899999999965 55 78899999999999999999887 6777765544
Q ss_pred -CeEEEE----EcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcC---CCCEEEEEecCCcEEEEeC
Q psy6213 142 -SVRDVE----FNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHP---EHAWLATASRDKTIKVWDL 213 (330)
Q Consensus 142 -~v~~~~----~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~ 213 (330)
.+.+++ |+|++. ++++++.||.|++||+++. +. .....|...|.+++|+| ++.+|++++.||.|++||+
T Consensus 165 ~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~-~~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 241 (357)
T 3i2n_A 165 RDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFDLRNM-AL-RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241 (357)
T ss_dssp CCEEEEEEECCCC-CCC-EEEEEETTSEEEEEETTTT-EE-EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEE
T ss_pred CceEEEEEEeccCCCCC-EEEEEccCCeEEEEECccC-ce-eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeC
Confidence 788998 678888 6999999999999999974 33 34456889999999999 9999999999999999999
Q ss_pred CCCcccccee-----ccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCc------------------cceEeec
Q psy6213 214 SIKPSLEYSI-----NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYI------------------PLASFTE 270 (330)
Q Consensus 214 ~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~------------------~~~~~~~ 270 (330)
++.+...... .+...+.+++|+|+++.++++++ .||.|++||++.+.. .+..+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 319 (357)
T 3i2n_A 242 RTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAG--GAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTL 319 (357)
T ss_dssp EEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEE--TTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEEC
T ss_pred cCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEe--CCCcEEEeecCCCcccccccCCCCccccccccceeecccc
Confidence 8875544443 68899999999999995577776 699999999986542 3567788
Q ss_pred CCCCeEEEEEecCCCEEE-EeecCCeEeeeeccc
Q psy6213 271 HKDVVSGLAWRGDPQLFI-ASSRVSIIPRAKNIK 303 (330)
Q Consensus 271 ~~~~v~~~~~~~~~~~l~-s~~~dg~i~iw~~~~ 303 (330)
|...|.+++|+|++++|+ +++.||.|++|+..+
T Consensus 320 ~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 320 STQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp CSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred CCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 999999999999999998 899999999997653
No 26
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=7.9e-44 Score=300.35 Aligned_cols=282 Identities=12% Similarity=0.151 Sum_probs=231.7
Q ss_pred CCcccceEEEEeeCC-CeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEE
Q psy6213 2 AYLSPVHKHGLKADN-GLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVV 78 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~-~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 78 (330)
.|.+.|++++|+|++ +++++| ||.|++||+.+++....+... .+...|.+++|+|.++++|++++.|+.|++
T Consensus 71 ~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~~l~s~~~d~~i~i 145 (383)
T 3ei3_B 71 PFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGM-----GPGDAITGMKFNQFNTNQLFVSSIRGATTL 145 (383)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCC-----STTCBEEEEEEETTEEEEEEEEETTTEEEE
T ss_pred CCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecC-----CcCCceeEEEeCCCCCCEEEEEeCCCEEEE
Confidence 589999999999999 775555 999999999988766555431 233457999999966799999999999999
Q ss_pred EECCCCCCCceeEEec---ccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcE
Q psy6213 79 WNLGQISRSKQERVFN---DHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYA 155 (330)
Q Consensus 79 w~~~~~~~~~~~~~~~---~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 155 (330)
||+.. .....+. .|...|.+++|+| ++++|++++.|+.|++||+ +++.+..+..|...|.+++|+|+++++
T Consensus 146 wd~~~----~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~ 219 (383)
T 3ei3_B 146 RDFSG----SVIQVFAKTDSWDYWYCCVDVSV-SRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWL 219 (383)
T ss_dssp EETTS----CEEEEEECCCCSSCCEEEEEEET-TTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTE
T ss_pred EECCC----CceEEEeccCCCCCCeEEEEECC-CCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCE
Confidence 99985 3333333 4458899999998 8999999999999999999 577888899999999999999999877
Q ss_pred EEEEecCCcEEEEecCCCc---cceeeeccCCCCeEEEEEcC-CCCEEEEEecCCcEEEEeCCCCccccceecc------
Q psy6213 156 FASVSENGTIQQWDVRRPE---KCFYQFTAHSGPIFACDWHP-EHAWLATASRDKTIKVWDLSIKPSLEYSINT------ 225 (330)
Q Consensus 156 ~~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------ 225 (330)
+++++.|+.|++||+++.. ..+..+ .|...|.+++|+| ++++|++++.|+.|++||+++.+.......+
T Consensus 220 l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 298 (383)
T 3ei3_B 220 MATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQ 298 (383)
T ss_dssp EEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCT
T ss_pred EEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccc
Confidence 9999999999999998732 233444 6999999999999 9999999999999999999987654443322
Q ss_pred -----------ccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeec--CCCCeEEEEEecCCCEEEEeec
Q psy6213 226 -----------IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTE--HKDVVSGLAWRGDPQLFIASSR 292 (330)
Q Consensus 226 -----------~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~ 292 (330)
...+..++|+|++++ +++ .|+.|++||+.+++. +..+.+ |...+..++|+|++++|++++
T Consensus 299 ~~~~~~~~~~p~~~~~~~~~s~dg~~---s~s--~d~~i~iwd~~~~~~-~~~l~~~~~~~~~~~~~~s~~g~~l~s~s- 371 (383)
T 3ei3_B 299 HLTPIKATWHPMYDLIVAGRYPDDQL---LLN--DKRTIDIYDANSGGL-VHQLRDPNAAGIISLNKFSPTGDVLASGM- 371 (383)
T ss_dssp TSCCCCCEECSSSSEEEEECBCCTTT---CTT--CCCCEEEEETTTCCE-EEEECBTTBCSCCCEEEECTTSSEEEEEE-
T ss_pred cccceEEeccCCCCceEEEecCCccc---ccC--CCCeEEEEecCCCce-eeeecCCCCCceEEEEEEecCccEEEEec-
Confidence 134555677777765 444 699999999998876 777776 457788889999999999997
Q ss_pred CCeEeeeecc
Q psy6213 293 VSIIPRAKNI 302 (330)
Q Consensus 293 dg~i~iw~~~ 302 (330)
||.|++|+..
T Consensus 372 d~~i~iw~~~ 381 (383)
T 3ei3_B 372 GFNILIWNRE 381 (383)
T ss_dssp TTEEEEEECC
T ss_pred CCcEEEEecC
Confidence 9999999864
No 27
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4e-44 Score=303.48 Aligned_cols=280 Identities=13% Similarity=0.141 Sum_probs=238.5
Q ss_pred CCcccceEEEEeeCCCe-eecC-CCeEEEEEcCCcc------eeeeeceeeccccccccceeeeeecccC----C---cE
Q psy6213 2 AYLSPVHKHGLKADNGL-AQPS-RNVFKIFLIKDTE------FVETHNLRVGKNINLNFSCNDVAWSCIE----E---NH 66 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~-~~~g-d~~i~iw~~~~~~------~~~~~~~~~~~~~~~~~~v~~~~~~~~~----~---~~ 66 (330)
.|.++|++++|+| ++ ++++ ||.|++|++.+++ ....+. .+...|.+++|+| + + ++
T Consensus 14 ~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~-------~h~~~v~~~~~~~-~~~~~g~~~~~ 83 (397)
T 1sq9_A 14 AHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHF-------VHKSGLHHVDVLQ-AIERDAFELCL 83 (397)
T ss_dssp CSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEE-------CCTTCEEEEEEEE-EEETTTEEEEE
T ss_pred hhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEe-------cCCCcEEEEEEec-ccccCCccccE
Confidence 5999999999999 55 5656 9999999999877 333333 2334579999999 7 8 99
Q ss_pred EEEEcCCCcEEEEECCCCCCCce-----eEEeccc-----ccceeEEEEE----ecCCCE-EEEEecCCcEEEEEeec--
Q psy6213 67 IATGATNGAVVVWNLGQISRSKQ-----ERVFNDH-----KRTVNKVSFH----YVESNW-LISGSQDGTMRLFDIRC-- 129 (330)
Q Consensus 67 l~~~~~dg~i~iw~~~~~~~~~~-----~~~~~~~-----~~~i~~i~~~----~~~~~~-l~~~~~d~~i~i~d~~~-- 129 (330)
|++++.||.|++|++.+ ... ...+..| ...|.+++|+ | ++++ |++++.||.|++||+++
T Consensus 84 l~s~~~dg~i~iw~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~ 159 (397)
T 1sq9_A 84 VATTSFSGDLLFYRITR---EDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDR-LLSHRLVATDVKGTTYIWKFHPFA 159 (397)
T ss_dssp EEEEETTSCEEEEEEEE---CTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEESSS
T ss_pred EEEEcCCCCEEEEEccC---CcccccccceeecccccccCCCcEEEEEEeeccCC-CCceEEEEEeCCCcEEEEeCCccc
Confidence 99999999999999987 343 6677778 5999999999 8 7888 99999999999999998
Q ss_pred ----Cceee-----eee-------cCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeecc---C---CCCe
Q psy6213 130 ----QESTK-----IFH-------SNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA---H---SGPI 187 (330)
Q Consensus 130 ----~~~~~-----~~~-------~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~---~---~~~i 187 (330)
++.+. .+. .|...+.+++|+|++ ++++++.||.|++||+++ .+.+..+.. | ...|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~h~~~~~~i 236 (397)
T 1sq9_A 160 DESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELST-LRPLYNFESQHSMINNSNSI 236 (397)
T ss_dssp SHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTT-TEEEEEEECCC---CCCCCE
T ss_pred cccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCC-CceeEEEeccccccccCCcc
Confidence 66666 663 478899999999999 699999999999999998 667788888 8 9999
Q ss_pred EEEEEcCCCCEEEEEecC---CcEEEEeCCCCccccceec-------------cccceEEEEEcCCCCeEEEEeecccCC
Q psy6213 188 FACDWHPEHAWLATASRD---KTIKVWDLSIKPSLEYSIN-------------TIASVSRIKWRPQRKFHLASCSLVVDS 251 (330)
Q Consensus 188 ~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~~~~~~~~~~ 251 (330)
.+++|+|++++|++++.| |.|++||+++++....... +...+.+++|+|++++++ +++ .|+
T Consensus 237 ~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~--~dg 313 (397)
T 1sq9_A 237 RSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLC-SAG--WDG 313 (397)
T ss_dssp EEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEE-EEE--TTS
T ss_pred ceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEE-EEe--CCC
Confidence 999999999999999999 9999999998866666665 889999999999999754 555 599
Q ss_pred eEEEEEccCCCccceEee------cC---------------CCCeEEEEEecCC----------CEEEEeecCCeEeeee
Q psy6213 252 SVNVWDIRRPYIPLASFT------EH---------------KDVVSGLAWRGDP----------QLFIASSRVSIIPRAK 300 (330)
Q Consensus 252 ~i~i~d~~~~~~~~~~~~------~~---------------~~~v~~~~~~~~~----------~~l~s~~~dg~i~iw~ 300 (330)
.|++||+++++. +..+. .| ...|.+++|+|++ ++|++++.||.|++|+
T Consensus 314 ~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~ 392 (397)
T 1sq9_A 314 KLRFWDVKTKER-ITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFR 392 (397)
T ss_dssp EEEEEETTTTEE-EEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEE
T ss_pred eEEEEEcCCCce-eEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEE
Confidence 999999998865 77787 77 8999999999998 7999999999999997
Q ss_pred cc
Q psy6213 301 NI 302 (330)
Q Consensus 301 ~~ 302 (330)
..
T Consensus 393 ~~ 394 (397)
T 1sq9_A 393 EA 394 (397)
T ss_dssp EE
T ss_pred cC
Confidence 53
No 28
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=5.3e-44 Score=323.27 Aligned_cols=287 Identities=18% Similarity=0.318 Sum_probs=233.8
Q ss_pred CCcccceEEEEeeCC-Cee-ecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEE
Q psy6213 2 AYLSPVHKHGLKADN-GLA-QPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVV 78 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~-~~~-~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 78 (330)
+|.+.|++++|+|++ +++ +++ |+.|++|++......... .......+...|.+++|+| ++++|++|+.||.|++
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~--~~~~~~~h~~~v~~v~~s~-~g~~l~sgs~Dg~v~v 456 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGV--AQRRLTGHSHFVEDVVLSS-DGQFALSGSWDGELRL 456 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCE--EEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEE
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccccc--ccceecCCCCcEEEEEECC-CCCEEEEEeCCCcEEE
Confidence 699999999999976 554 555 999999999864321100 0011223344579999999 9999999999999999
Q ss_pred EECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeee---ecCCCCeEEEEEcCCCC-c
Q psy6213 79 WNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIF---HSNTESVRDVEFNPHSP-Y 154 (330)
Q Consensus 79 w~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~---~~~~~~v~~~~~~~~~~-~ 154 (330)
||+.+ ......+.+|...|.+++|+| ++++|++|+.|++|++||.......... .+|...|.+++|+|++. .
T Consensus 457 wd~~~---~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~ 532 (694)
T 3dm0_A 457 WDLAA---GVSTRRFVGHTKDVLSVAFSL-DNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQP 532 (694)
T ss_dssp EETTT---TEEEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSC
T ss_pred EECCC---CcceeEEeCCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcc
Confidence 99988 778888999999999999998 8999999999999999998654333222 35788899999999873 3
Q ss_pred EEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEE
Q psy6213 155 AFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKW 234 (330)
Q Consensus 155 ~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 234 (330)
.+++++.|+.|++||+++ .+....+.+|.+.|++++|+|++++|++++.||.|++||+++++.+. ...+...+.+++|
T Consensus 533 ~l~s~s~d~~v~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~-~~~~~~~v~~~~~ 610 (694)
T 3dm0_A 533 TIVSASWDKTVKVWNLSN-CKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLY-SLEANSVIHALCF 610 (694)
T ss_dssp EEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEE-CCBCSSCEEEEEE
T ss_pred eEEEEeCCCeEEEEECCC-CcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEE-EecCCCcEEEEEE
Confidence 699999999999999997 66778889999999999999999999999999999999999885543 3345678999999
Q ss_pred cCCCCeEEEEeecccCCeEEEEEccCCCccceEeecC-------------------CCCeEEEEEecCCCEEEEeecCCe
Q psy6213 235 RPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEH-------------------KDVVSGLAWRGDPQLFIASSRVSI 295 (330)
Q Consensus 235 ~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~-------------------~~~v~~~~~~~~~~~l~s~~~dg~ 295 (330)
+|++.+ ++++. ++.|++||++++.. +..+..+ ...+++++|+|+|++|++|+.||.
T Consensus 611 sp~~~~-l~~~~---~~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~ 685 (694)
T 3dm0_A 611 SPNRYW-LCAAT---EHGIKIWDLESKSI-VEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGV 685 (694)
T ss_dssp CSSSSE-EEEEE---TTEEEEEETTTTEE-EEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSE
T ss_pred cCCCcE-EEEEc---CCCEEEEECCCCCC-hhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCe
Confidence 999986 56665 78899999998764 4433321 123789999999999999999999
Q ss_pred Eeeeecc
Q psy6213 296 IPRAKNI 302 (330)
Q Consensus 296 i~iw~~~ 302 (330)
|++|+..
T Consensus 686 i~iW~i~ 692 (694)
T 3dm0_A 686 IRVWGIG 692 (694)
T ss_dssp EEEEEC-
T ss_pred EEEEecc
Confidence 9999754
No 29
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.8e-45 Score=313.29 Aligned_cols=289 Identities=12% Similarity=0.131 Sum_probs=223.8
Q ss_pred CcccceEEEEeeC-CCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 3 YLSPVHKHGLKAD-NGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 3 H~~~v~~~~~s~~-~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
|...|+|++|+|. +++|++| ||.|+|||+.+++........ .+...|++++|+|.++++|++|+.||+|++|
T Consensus 118 ~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~-----gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 118 FDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGI-----GAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp CSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCC-----SSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEcc-----CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 7788999999995 4566666 999999999887654443322 2334579999998678999999999999999
Q ss_pred ECCCCCCCceeEEe--cccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEE
Q psy6213 80 NLGQISRSKQERVF--NDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFA 157 (330)
Q Consensus 80 ~~~~~~~~~~~~~~--~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 157 (330)
|++. ....... ..+...+.+++|+| ++.+|++|+.||.|++||++ ++.+..+..|...|.+++|+|+++.+++
T Consensus 193 d~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~ 267 (435)
T 4e54_B 193 DFKG---NILRVFASSDTINIWFCSLDVSA-SSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLA 267 (435)
T ss_dssp ETTS---CEEEEEECCSSCSCCCCCEEEET-TTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEE
T ss_pred eccC---CceeEEeccCCCCccEEEEEECC-CCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEE
Confidence 9976 3222222 23345678999998 89999999999999999986 5567788889999999999999988899
Q ss_pred EEecCCcEEEEecCCCcc--ceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccc------cce
Q psy6213 158 SVSENGTIQQWDVRRPEK--CFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTI------ASV 229 (330)
Q Consensus 158 ~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------~~v 229 (330)
+++.|+.|++||+++... ......+|...|++++|+|+|++|++++.||.|++||++++........+. ..+
T Consensus 268 s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 347 (435)
T 4e54_B 268 TASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTP 347 (435)
T ss_dssp EEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCC
T ss_pred EecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEeccccccccccee
Confidence 999999999999987432 223345799999999999999999999999999999999876544333322 123
Q ss_pred EEEEEcCCCCeEEEEeec---------ccCCeEEEEEccCCCccceEeecCCCCeEEE-EEecCCCEEEEeecCCeEeee
Q psy6213 230 SRIKWRPQRKFHLASCSL---------VVDSSVNVWDIRRPYIPLASFTEHKDVVSGL-AWRGDPQLFIASSRVSIIPRA 299 (330)
Q Consensus 230 ~~~~~~~~~~~l~~~~~~---------~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~s~~~dg~i~iw 299 (330)
....|+|++..++++... ..++.|++||..+++.......+|...|.++ +|+|+|++|++|+ |+.|++|
T Consensus 348 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW 426 (435)
T 4e54_B 348 IKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIW 426 (435)
T ss_dssp CBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEEC
T ss_pred EEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEE
Confidence 344566666554443320 0356899999999876333445788889887 6999999999876 8899999
Q ss_pred ecc
Q psy6213 300 KNI 302 (330)
Q Consensus 300 ~~~ 302 (330)
+..
T Consensus 427 ~~~ 429 (435)
T 4e54_B 427 SQQ 429 (435)
T ss_dssp CCC
T ss_pred ECC
Confidence 754
No 30
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.2e-43 Score=297.93 Aligned_cols=286 Identities=15% Similarity=0.159 Sum_probs=236.8
Q ss_pred CCcccceEEEEeeCCCe-eecC-CCeEEEEEcCCcc--eeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEE
Q psy6213 2 AYLSPVHKHGLKADNGL-AQPS-RNVFKIFLIKDTE--FVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVV 77 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~-~~~g-d~~i~iw~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 77 (330)
.|.++|++++|+|++++ ++++ |+.|++||+++++ ....+..+ ...|.+++|+| ++++|++++.||.|+
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h-------~~~v~~~~~~~-~~~~l~~~~~dg~i~ 77 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEH-------NGQVTGVDWAP-DSNRIVTCGTDRNAY 77 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECC-------SSCEEEEEEET-TTTEEEEEETTSCEE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCC-------CCcccEEEEeC-CCCEEEEEcCCCeEE
Confidence 38899999999999999 4555 9999999999886 44443332 33479999999 999999999999999
Q ss_pred EEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCce---e-eeeecCCCCeEEEEEcCCCC
Q psy6213 78 VWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQES---T-KIFHSNTESVRDVEFNPHSP 153 (330)
Q Consensus 78 iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~---~-~~~~~~~~~v~~~~~~~~~~ 153 (330)
+||+.+. +......+..|...|.+++|+| ++++|++++.|+.|++||++.++. . .....|...|.+++|+|+++
T Consensus 78 vwd~~~~-~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 155 (372)
T 1k8k_C 78 VWTLKGR-TWKPTLVILRINRAARCVRWAP-NEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV 155 (372)
T ss_dssp EEEEETT-EEEEEEECCCCSSCEEEEEECT-TSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS
T ss_pred EEECCCC-eeeeeEEeecCCCceeEEEECC-CCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC
Confidence 9999762 1122334467899999999998 899999999999999999998763 2 23355788999999999998
Q ss_pred cEEEEEecCCcEEEEecCC-----------------CccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCC
Q psy6213 154 YAFASVSENGTIQQWDVRR-----------------PEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIK 216 (330)
Q Consensus 154 ~~~~~~~~dg~i~i~d~~~-----------------~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 216 (330)
.+++++.||.|++||++. ....+..+..|...|.+++|+|++++|++++.||.|++||++++
T Consensus 156 -~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~ 234 (372)
T 1k8k_C 156 -LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKK 234 (372)
T ss_dssp -EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGT
T ss_pred -EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCC
Confidence 699999999999999641 24567778889999999999999999999999999999999998
Q ss_pred ccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccC--CCc-------------------------------
Q psy6213 217 PSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR--PYI------------------------------- 263 (330)
Q Consensus 217 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~--~~~------------------------------- 263 (330)
+.......+..++.+++|+|++.+ ++++. |+.|++|+++. +..
T Consensus 235 ~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~---d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (372)
T 1k8k_C 235 MAVATLASETLPLLAVTFITESSL-VAAGH---DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKAS 310 (372)
T ss_dssp TEEEEEECSSCCEEEEEEEETTEE-EEEET---TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC-
T ss_pred ceeEEEccCCCCeEEEEEecCCCE-EEEEe---CCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccc
Confidence 777777778889999999999986 55555 99999999987 310
Q ss_pred cc------eEe-ecCCCCeEEEEEe-cCC---CEEEEeecCCeEeeeecc
Q psy6213 264 PL------ASF-TEHKDVVSGLAWR-GDP---QLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 264 ~~------~~~-~~~~~~v~~~~~~-~~~---~~l~s~~~dg~i~iw~~~ 302 (330)
.. ..+ .+|..+|++++|. ++| ++|++++.||.|++|+..
T Consensus 311 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 311 SEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp --------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHH
T ss_pred cccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEec
Confidence 00 222 4899999999977 566 999999999999999754
No 31
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.4e-43 Score=301.09 Aligned_cols=242 Identities=22% Similarity=0.387 Sum_probs=222.9
Q ss_pred cccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeec
Q psy6213 50 LNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC 129 (330)
Q Consensus 50 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (330)
+..+|++++|+| ++.+|++|+.||.|++||+.+ .+....+.+|...|.+++|+| ++++|++|+.|++|++||+.+
T Consensus 107 h~~~V~~~~~~p-~~~~l~s~s~Dg~i~vwd~~~---~~~~~~l~~h~~~V~~v~~~~-~~~~l~sgs~D~~i~iwd~~~ 181 (410)
T 1vyh_C 107 HRSPVTRVIFHP-VFSVMVSASEDATIKVWDYET---GDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWDFQG 181 (410)
T ss_dssp CSSCEEEEEECS-SSSEEEEEESSSCEEEEETTT---CCCCEEECCCSSCEEEEEECT-TSSEEEEEETTSCCCEEETTS
T ss_pred cCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCC---CcEEEEEeccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEeCCC
Confidence 456789999999 999999999999999999988 677888999999999999998 899999999999999999999
Q ss_pred CceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEE
Q psy6213 130 QESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIK 209 (330)
Q Consensus 130 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 209 (330)
++.+..+.+|...|.+++|+|+++ .+++++.|+.|++||+++ +.++..+.+|...|.++.++|++.+|++++.|+.|+
T Consensus 182 ~~~~~~~~~h~~~V~~v~~~p~~~-~l~s~s~D~~i~~wd~~~-~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~ 259 (410)
T 1vyh_C 182 FECIRTMHGHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQT-GYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVR 259 (410)
T ss_dssp SCEEECCCCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CceeEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCC-CcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEE
Confidence 999999999999999999999998 699999999999999998 667888999999999999999999999999999999
Q ss_pred EEeCCCCccccceeccccceEEEEEcCC--------------------CCeEEEEeecccCCeEEEEEccCCCccceEee
Q psy6213 210 VWDLSIKPSLEYSINTIASVSRIKWRPQ--------------------RKFHLASCSLVVDSSVNVWDIRRPYIPLASFT 269 (330)
Q Consensus 210 i~d~~~~~~~~~~~~~~~~v~~~~~~~~--------------------~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~ 269 (330)
+||+++.+.......|...|.+++|+|+ +.+ +++++ .|+.|++||++++.. +..+.
T Consensus 260 vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-l~sgs--~D~~i~iwd~~~~~~-~~~~~ 335 (410)
T 1vyh_C 260 VWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPF-LLSGS--RDKTIKMWDVSTGMC-LMTLV 335 (410)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCE-EEEEE--TTSEEEEEETTTTEE-EEEEE
T ss_pred EEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCE-EEEEe--CCCeEEEEECCCCce-EEEEE
Confidence 9999998777777788899999999997 454 66666 699999999998865 78889
Q ss_pred cCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 270 EHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 270 ~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
+|...|.+++|+|++++|++++.||.|++|+..
T Consensus 336 ~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~ 368 (410)
T 1vyh_C 336 GHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368 (410)
T ss_dssp CCSSCEEEEEECSSSSCEEEEETTTEEEEECCT
T ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 999999999999999999999999999999853
No 32
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.9e-43 Score=290.39 Aligned_cols=241 Identities=18% Similarity=0.346 Sum_probs=216.7
Q ss_pred CCcccceEEEEeeCCCeeec-C-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQP-S-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~-g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|...|.+++|+|++.++++ + |+.|++||+.+++....+..+.. .+.+++|+| ++++|++|+.||.|++|
T Consensus 78 gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~-------~~~~~~~sp-dg~~l~~g~~dg~v~i~ 149 (321)
T 3ow8_A 78 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPV-------DAWTLAFSP-DSQYLATGTHVGKVNIF 149 (321)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTT-------CCCCEEECT-TSSEEEEECTTSEEEEE
T ss_pred cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCc-------cEEEEEECC-CCCEEEEEcCCCcEEEE
Confidence 58999999999999999544 4 99999999999887766544332 357899999 99999999999999999
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEE
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASV 159 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 159 (330)
++++ .+....+..|...+.+++|+| ++++|++|+.||.|++||+++++.+..+.+|..+|.+++|+|+++ +|+++
T Consensus 150 ~~~~---~~~~~~~~~~~~~v~~~~~sp-dg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~-~l~s~ 224 (321)
T 3ow8_A 150 GVES---GKKEYSLDTRGKFILSIAYSP-DGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVTA 224 (321)
T ss_dssp ETTT---CSEEEEEECSSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSC-EEEEE
T ss_pred EcCC---CceeEEecCCCceEEEEEECC-CCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCC-EEEEE
Confidence 9988 667777888999999999999 899999999999999999999999999999999999999999998 69999
Q ss_pred ecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcCCCC
Q psy6213 160 SENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRK 239 (330)
Q Consensus 160 ~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 239 (330)
+.|+.|++||+++ ......+.+|...|.+++|+|++++|++++.|+.|++||+++++.......|...|.+++|+|+++
T Consensus 225 s~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~ 303 (321)
T 3ow8_A 225 SDDGYIKIYDVQH-ANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGS 303 (321)
T ss_dssp CTTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred cCCCeEEEEECCC-cceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCC
Confidence 9999999999997 566788899999999999999999999999999999999999877777778899999999999999
Q ss_pred eEEEEeecccCCeEEEEEcc
Q psy6213 240 FHLASCSLVVDSSVNVWDIR 259 (330)
Q Consensus 240 ~l~~~~~~~~~~~i~i~d~~ 259 (330)
++ ++++ .|+.|++||..
T Consensus 304 ~l-~s~~--~d~~i~vwd~p 320 (321)
T 3ow8_A 304 KI-VSVG--DDQEIHIYDCP 320 (321)
T ss_dssp EE-EEEE--TTCCEEEEECC
T ss_pred EE-EEEe--CCCeEEEEeCC
Confidence 75 4555 59999999963
No 33
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-44 Score=304.84 Aligned_cols=283 Identities=13% Similarity=0.132 Sum_probs=222.0
Q ss_pred CcccceEEEEeeCCCeeecC--CCeEEEEEcCCc--ceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEE
Q psy6213 3 YLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDT--EFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVV 78 (330)
Q Consensus 3 H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 78 (330)
|.++|++++|+|+|++++++ |+.|++||+.++ +....+..| ...|.+++|+| ++++|++++.||.|++
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h-------~~~v~~~~~s~-~~~~l~s~s~d~~v~v 81 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDH-------DKIVTCVDWAP-KSNRIVTCSQDRNAYV 81 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCC-------SSCEEEEEECT-TTCCEEEEETTSSEEE
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecC-------CceEEEEEEeC-CCCEEEEEeCCCeEEE
Confidence 56899999999999995555 999999999987 444433333 34479999999 8999999999999999
Q ss_pred EECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCc---eeeeeec-CCCCeEEEEEcCCCCc
Q psy6213 79 WNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQE---STKIFHS-NTESVRDVEFNPHSPY 154 (330)
Q Consensus 79 w~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~---~~~~~~~-~~~~v~~~~~~~~~~~ 154 (330)
||+.+.........+..|...|.+++|+| ++++|++++.|+.|++||+++++ ....+.. |...|.+++|+|+++
T Consensus 82 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~- 159 (377)
T 3dwl_C 82 YEKRPDGTWKQTLVLLRLNRAATFVRWSP-NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNV- 159 (377)
T ss_dssp C------CCCCEEECCCCSSCEEEEECCT-TSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSS-
T ss_pred EEcCCCCceeeeeEecccCCceEEEEECC-CCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCC-
Confidence 99987332336677788999999999998 89999999999999999999887 3677777 899999999999998
Q ss_pred EEEEEecCCcEEEEecCCC-----------------ccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCc
Q psy6213 155 AFASVSENGTIQQWDVRRP-----------------EKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKP 217 (330)
Q Consensus 155 ~~~~~~~dg~i~i~d~~~~-----------------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 217 (330)
++++++.|+.|++||++.. ..+...+ .|...|.+++|+|++++|++++.||.|++||+++++
T Consensus 160 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~ 238 (377)
T 3dwl_C 160 LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPE 238 (377)
T ss_dssp EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTT
T ss_pred EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCC
Confidence 6999999999999998521 3344555 899999999999999999999999999999999987
Q ss_pred c----ccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCC-cc----------------------------
Q psy6213 218 S----LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY-IP---------------------------- 264 (330)
Q Consensus 218 ~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~-~~---------------------------- 264 (330)
. ......+..++.+++|+|++++ +++++ ++.+.+|+..... ..
T Consensus 239 ~~~~~~~~~~~~~~~v~~~~~s~~~~~-l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (377)
T 3dwl_C 239 QPPRALITVKLSQLPLRSLLWANESAI-VAAGY---NYSPILLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGP 314 (377)
T ss_dssp SCEEECCCEECSSSCEEEEEEEETTEE-EEEES---SSSEEEECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC---
T ss_pred CcceeeEeecCCCCceEEEEEcCCCCE-EEEEc---CCcEEEEEeCCCceEEEeeecccccccccccccccccccccccc
Confidence 6 6667778889999999999986 56665 4555577765211 00
Q ss_pred c------e----------------EeecCCCCeEEEEEecCC-C---EEEEeecCCeEeeee
Q psy6213 265 L------A----------------SFTEHKDVVSGLAWRGDP-Q---LFIASSRVSIIPRAK 300 (330)
Q Consensus 265 ~------~----------------~~~~~~~~v~~~~~~~~~-~---~l~s~~~dg~i~iw~ 300 (330)
. . ....|...|+++++.++. . .|+|++.||.|++|+
T Consensus 315 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWd 376 (377)
T 3dwl_C 315 VSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWT 376 (377)
T ss_dssp ----------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEEC
T ss_pred cccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEec
Confidence 0 0 011389999999977643 3 699999999999996
No 34
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-42 Score=283.61 Aligned_cols=277 Identities=18% Similarity=0.162 Sum_probs=239.1
Q ss_pred CCcccceEEEEeeCCCe-eecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGL-AQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~-~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|.++|++++| |++++ ++++ ||.|++||+.+++....+..+. ..|.+++|+| ++++|++++.||.+++|
T Consensus 16 ~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~-------~~v~~~~~~~-~~~~l~~~~~dg~i~~~ 86 (313)
T 3odt_A 16 GHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQ-------GFLNSVCYDS-EKELLLFGGKDTMINGV 86 (313)
T ss_dssp CCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECS-------SCEEEEEEET-TTTEEEEEETTSCEEEE
T ss_pred CCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCC-------ccEEEEEECC-CCCEEEEecCCCeEEEE
Confidence 69999999999 88988 4444 9999999998887666555443 3369999999 99999999999999999
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcC-CCCcEEEE
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNP-HSPYAFAS 158 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~ 158 (330)
++......+....+..|...|.++.|. ++++++++.|+.|++|| .++....+..|...+.+++|.| +++ .+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~ 160 (313)
T 3odt_A 87 PLFATSGEDPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSEN-KFLT 160 (313)
T ss_dssp ETTCCTTSCC-CEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTT-EEEE
T ss_pred EeeecCCCCcccchhhcccCEEEEEec---CCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCC-EEEE
Confidence 998765567778888999999999994 67999999999999999 6778888888999999999998 565 7999
Q ss_pred EecCCcEEEEecCCCccceeeecc-CCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcCC
Q psy6213 159 VSENGTIQQWDVRRPEKCFYQFTA-HSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQ 237 (330)
Q Consensus 159 ~~~dg~i~i~d~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~ 237 (330)
++.||.|++||.. .....+.. |...+.+++|+|++. +++++.||.|++||+++++.......+...+.+++|+|+
T Consensus 161 ~~~d~~i~i~d~~---~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 236 (313)
T 3odt_A 161 ASADKTIKLWQND---KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPN 236 (313)
T ss_dssp EETTSCEEEEETT---EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred EECCCCEEEEecC---ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecC
Confidence 9999999999943 44555665 889999999999998 999999999999999998777777778999999999999
Q ss_pred CCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeeccc
Q psy6213 238 RKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIK 303 (330)
Q Consensus 238 ~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 303 (330)
+. +++++ .||.|++||+++++. ...+..|...|.+++|+|+++ +++++.||.|++|+...
T Consensus 237 ~~-l~~~~---~dg~v~iwd~~~~~~-~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 237 GD-IVSCG---EDRTVRIWSKENGSL-KQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp SC-EEEEE---TTSEEEEECTTTCCE-EEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCG
T ss_pred CC-EEEEe---cCCEEEEEECCCCce-eEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCC
Confidence 94 45444 599999999999876 788889999999999999998 66799999999998653
No 35
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-44 Score=304.07 Aligned_cols=290 Identities=19% Similarity=0.329 Sum_probs=241.1
Q ss_pred CcccceEEEEeeCCC-e-eec----------C-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEE
Q psy6213 3 YLSPVHKHGLKADNG-L-AQP----------S-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIAT 69 (330)
Q Consensus 3 H~~~v~~~~~s~~~~-~-~~~----------g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 69 (330)
+..+|.+++|+|+|+ + +++ + |+.|++||+.+++...... ...+...|.+++|+| ++++|++
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~-----~~~~~~~v~~~~~s~-~~~~l~~ 84 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIA-----SLQVDSKFNDLDWSH-NNKIIAG 84 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSC-----CCCCSSCEEEEEECS-SSSCEEE
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEE-----EEecCCceEEEEECC-CCCeEEE
Confidence 456899999999997 6 666 6 8899999999876331111 112334579999999 9999999
Q ss_pred EcCCCcEEEEECCCCCC-CceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCc------eeee---eecC
Q psy6213 70 GATNGAVVVWNLGQISR-SKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQE------STKI---FHSN 139 (330)
Q Consensus 70 ~~~dg~i~iw~~~~~~~-~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~------~~~~---~~~~ 139 (330)
++.||.|++|++..... ......+..|...|.+++|+|+++++|++++.|+.|++||+++++ .... +..|
T Consensus 85 ~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 164 (416)
T 2pm9_A 85 ALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSS 164 (416)
T ss_dssp EESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCS
T ss_pred EccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCC
Confidence 99999999999976322 247778889999999999999448999999999999999999876 3332 3568
Q ss_pred CCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccC------CCCeEEEEEcCCC-CEEEEEecCC---cEE
Q psy6213 140 TESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAH------SGPIFACDWHPEH-AWLATASRDK---TIK 209 (330)
Q Consensus 140 ~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~------~~~i~~~~~~~~~-~~l~~~~~dg---~i~ 209 (330)
...|.+++|+|++..++++++.||.|++||+++ .+....+..+ ...+.+++|+|++ .++++++.|+ .|+
T Consensus 165 ~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~ 243 (416)
T 2pm9_A 165 VDEVISLAWNQSLAHVFASAGSSNFASIWDLKA-KKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSIL 243 (416)
T ss_dssp SCCCCEEEECSSCTTEEEEESSSSCEEEEETTT-TEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCC
T ss_pred CCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCC-CCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEE
Confidence 889999999999555899999999999999998 5566666655 7889999999997 6899999998 999
Q ss_pred EEeCCCCcc-cccee-ccccceEEEEEcC-CCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCC-C
Q psy6213 210 VWDLSIKPS-LEYSI-NTIASVSRIKWRP-QRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDP-Q 285 (330)
Q Consensus 210 i~d~~~~~~-~~~~~-~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~-~ 285 (330)
+||+++... ..... .|...+.+++|+| ++++ +++++ .|+.|++||+++++. +..+..|...|.+++|+|++ .
T Consensus 244 ~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-l~s~~--~dg~v~~wd~~~~~~-~~~~~~~~~~v~~~~~s~~~~~ 319 (416)
T 2pm9_A 244 IWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHL-LLSSG--RDNTVLLWNPESAEQ-LSQFPARGNWCFKTKFAPEAPD 319 (416)
T ss_dssp EEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSC-EEEEE--SSSEEEEECSSSCCE-EEEEECSSSCCCCEEECTTCTT
T ss_pred EEeCCCCCCCcEEeecCccCceeEEEeCCCCCCe-EEEEe--CCCCEEEeeCCCCcc-ceeecCCCCceEEEEECCCCCC
Confidence 999998643 44444 6889999999999 7886 55555 599999999998866 88889999999999999998 8
Q ss_pred EEEEeecCCeEeeeeccc
Q psy6213 286 LFIASSRVSIIPRAKNIK 303 (330)
Q Consensus 286 ~l~s~~~dg~i~iw~~~~ 303 (330)
+|++++.||.|++|+...
T Consensus 320 ~l~s~~~d~~i~iw~~~~ 337 (416)
T 2pm9_A 320 LFACASFDNKIEVQTLQN 337 (416)
T ss_dssp EEEECCSSSEEEEEESCC
T ss_pred EEEEEecCCcEEEEEccC
Confidence 999999999999998653
No 36
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.6e-43 Score=299.25 Aligned_cols=286 Identities=18% Similarity=0.255 Sum_probs=239.8
Q ss_pred CcccceEEEEeeCCC-eeecC--CCeEEEEEc----CCcce------eeeeceeec---cccccccceeeeeecccCCcE
Q psy6213 3 YLSPVHKHGLKADNG-LAQPS--RNVFKIFLI----KDTEF------VETHNLRVG---KNINLNFSCNDVAWSCIEENH 66 (330)
Q Consensus 3 H~~~v~~~~~s~~~~-~~~~g--d~~i~iw~~----~~~~~------~~~~~~~~~---~~~~~~~~v~~~~~~~~~~~~ 66 (330)
|.++|++++|+|+|+ ++++| ||.|++|++ .+++. ...+..... ....+...|.+++|+| ++++
T Consensus 44 ~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~ 122 (425)
T 1r5m_A 44 KLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSH-DGNS 122 (425)
T ss_dssp ECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECT-TSSE
T ss_pred ccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcC-CCCE
Confidence 668999999999999 85555 999999999 77762 222211100 0011344689999999 9999
Q ss_pred EEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCC----
Q psy6213 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTES---- 142 (330)
Q Consensus 67 l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~---- 142 (330)
|++++.||.|++||. + ......+..|...|.+++|+| ++++|++++.|+.|++||+++++.+..+..+...
T Consensus 123 l~~~~~dg~i~i~~~-~---~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 197 (425)
T 1r5m_A 123 IVTGVENGELRLWNK-T---GALLNVLNFHRAPIVSVKWNK-DGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSI 197 (425)
T ss_dssp EEEEETTSCEEEEET-T---SCEEEEECCCCSCEEEEEECT-TSSEEEEEETTCCEEEEETTTTEEEEEECCC-------
T ss_pred EEEEeCCCeEEEEeC-C---CCeeeeccCCCccEEEEEECC-CCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccce
Confidence 999999999999993 3 577788889999999999998 8999999999999999999999998888877766
Q ss_pred -----------eEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEE
Q psy6213 143 -----------VRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVW 211 (330)
Q Consensus 143 -----------v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 211 (330)
+.+++|+|++ .+++++.+|.|++||+++ ......+..|...|.+++|+|++++|++++.||.|++|
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~ 274 (425)
T 1r5m_A 198 NAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITE-KTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIW 274 (425)
T ss_dssp --------CCCBSCCEEEETT--EEEEECGGGCEEEEETTC-SSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred eeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCC-CceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 9999999986 488999999999999998 56777888899999999999999999999999999999
Q ss_pred eCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEee
Q psy6213 212 DLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291 (330)
Q Consensus 212 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 291 (330)
|+++.+.......+...+.+++|+|++ . +++++ .|+.|++||+++++. +..+..|...|.+++|+|++++|++++
T Consensus 275 d~~~~~~~~~~~~~~~~i~~~~~~~~~-~-l~~~~--~d~~i~i~d~~~~~~-~~~~~~~~~~i~~~~~s~~~~~l~~~~ 349 (425)
T 1r5m_A 275 HGGNGNSQNCFYGHSQSIVSASWVGDD-K-VISCS--MDGSVRLWSLKQNTL-LALSIVDGVPIFAGRISQDGQKYAVAF 349 (425)
T ss_dssp CSSSBSCSEEECCCSSCEEEEEEETTT-E-EEEEE--TTSEEEEEETTTTEE-EEEEECTTCCEEEEEECTTSSEEEEEE
T ss_pred ECCCCccceEecCCCccEEEEEECCCC-E-EEEEe--CCCcEEEEECCCCcE-eEecccCCccEEEEEEcCCCCEEEEEE
Confidence 999987777777788999999999999 5 55555 599999999998865 778889999999999999999999999
Q ss_pred cCCeEeeeecc
Q psy6213 292 RVSIIPRAKNI 302 (330)
Q Consensus 292 ~dg~i~iw~~~ 302 (330)
.||.|++|+..
T Consensus 350 ~dg~i~i~~~~ 360 (425)
T 1r5m_A 350 MDGQVNVYDLK 360 (425)
T ss_dssp TTSCEEEEECH
T ss_pred CCCeEEEEECC
Confidence 99999999864
No 37
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.3e-42 Score=308.22 Aligned_cols=277 Identities=23% Similarity=0.379 Sum_probs=240.7
Q ss_pred CCcccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|..+|++++|+|+++.++++ |+.|++|+.. ++....+..+ ...|.+++|+| +++.|++++.||.|++|
T Consensus 260 ~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~~h-------~~~v~~~~~~~-~~~~l~t~~~d~~i~~w 330 (577)
T 2ymu_A 260 GHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLTGH-------SSSVWGVAFSP-DGQTIASASDDKTVKLW 330 (577)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCC-------SSCEEEEEECT-TSSEEEEEETTSCEEEE
T ss_pred cCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEecC-------CCCeEEEEECC-CCCEEEEEeCCCeEEEE
Confidence 588999999999999995554 9999999975 4444444333 33468999999 99999999999999999
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEE
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASV 159 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 159 (330)
|... .....+..|...+.+++|+| +++++++++.|+.|++||. +++.+..+..|...|.+++|+|+++ .++++
T Consensus 331 ~~~~----~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~-~l~~~ 403 (577)
T 2ymu_A 331 NRNG----QHLQTLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQ-TIASA 403 (577)
T ss_dssp ETTS----CEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSS-CEEEE
T ss_pred eCCC----CeeEEEeCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCC-EEEEE
Confidence 9865 45667788999999999998 8999999999999999995 5778888889999999999999999 48999
Q ss_pred ecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcCCCC
Q psy6213 160 SENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRK 239 (330)
Q Consensus 160 ~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 239 (330)
+.|+.|++||.. .+.+..+.+|...|.+++|+|++++|++++.|+.|++||... +.......|...+.+++|+|+++
T Consensus 404 ~~d~~v~~~~~~--~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-~~~~~~~~~~~~v~~~~~spd~~ 480 (577)
T 2ymu_A 404 SDDKTVKLWNRN--GQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-QLLQTLTGHSSSVRGVAFSPDGQ 480 (577)
T ss_dssp ETTSEEEEECTT--CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-CEEEEEECCSSCEEEEEECTTSC
T ss_pred eCCCEEEEEeCC--CCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-CEEEEEcCCCCCEEEEEEcCCCC
Confidence 999999999964 566778889999999999999999999999999999999754 45666677889999999999999
Q ss_pred eEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 240 FHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 240 ~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
+ +++++ .|+.|++||.. ++. +..+.+|...|++++|+|++++|++++.||.|++|+..
T Consensus 481 ~-las~~--~d~~i~iw~~~-~~~-~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 481 T-IASAS--DDKTVKLWNRN-GQL-LQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp E-EEEEE--TTSEEEEEETT-SCE-EEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred E-EEEEe--CCCEEEEEcCC-CCE-EEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 7 55555 59999999964 444 78899999999999999999999999999999999854
No 38
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.2e-43 Score=302.79 Aligned_cols=280 Identities=14% Similarity=0.145 Sum_probs=233.2
Q ss_pred cceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCC
Q psy6213 6 PVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQ 83 (330)
Q Consensus 6 ~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 83 (330)
.+++++|+|+|++++++ |+.+++||+.+++.......+ . .+....|+| ++++|++|+.||.|++||+.+
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~--~------~~~~~~~~~-~~~~l~~~~~dg~i~iwd~~~ 128 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA--D------YTAVDTAKL-QMRRFILGTTEGDIKVLDSNF 128 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC--C------EEEEEEECS-SSCEEEEEETTSCEEEECTTS
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC--C------ceEEEEEec-CCCEEEEEECCCCEEEEeCCC
Confidence 45689999999995555 999999999887654433322 1 134556788 999999999999999999987
Q ss_pred CCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCC
Q psy6213 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENG 163 (330)
Q Consensus 84 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg 163 (330)
......+..|...|.+++|+| ++++|++++.|+.|++||+++++.+..+.+|...|.+++|+|+++ .+++++.||
T Consensus 129 ---~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~ 203 (420)
T 3vl1_A 129 ---NLQREIDQAHVSEITKLKFFP-SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGR-NVLSASLDG 203 (420)
T ss_dssp ---CEEEEETTSSSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTT-EEEEEETTS
T ss_pred ---cceeeecccccCccEEEEECC-CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCC-EEEEEcCCC
Confidence 677777789999999999999 899999999999999999999999999999999999999999998 689999999
Q ss_pred cEEEEecCCCccceeeecc---C---------------------CCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccc
Q psy6213 164 TIQQWDVRRPEKCFYQFTA---H---------------------SGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSL 219 (330)
Q Consensus 164 ~i~i~d~~~~~~~~~~~~~---~---------------------~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 219 (330)
.|++||+++ .+....+.. + ...+.+++|+|++++|++++.||.|++||+++++..
T Consensus 204 ~v~iwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~ 282 (420)
T 3vl1_A 204 TIRLWECGT-GTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQT 282 (420)
T ss_dssp CEEEEETTT-TEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEE
T ss_pred cEEEeECCC-CceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCcee
Confidence 999999997 555655553 2 245556667899999999999999999999988654
Q ss_pred ccee-ccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeec-CCCCeEEEEEecCCCEEEEeecCCeEe
Q psy6213 220 EYSI-NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTE-HKDVVSGLAWRGDPQLFIASSRVSIIP 297 (330)
Q Consensus 220 ~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~ 297 (330)
.... .+...+.+++|+|+++.++++++ .||.|++||+++++.++..+.. |...|.++.+ +++++|++++.||.|+
T Consensus 283 ~~~~~~~~~~v~~~~~~~~~~~~l~~g~--~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~ 359 (420)
T 3vl1_A 283 IQLPSKFTCSCNSLTVDGNNANYIYAGY--ENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIK 359 (420)
T ss_dssp EEECCTTSSCEEEEEECSSCTTEEEEEE--TTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEE
T ss_pred EEcccccCCCceeEEEeCCCCCEEEEEe--CCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEE
Confidence 4443 46789999999999994466666 6999999999998766777776 6677888855 5788999999999999
Q ss_pred eeeccc
Q psy6213 298 RAKNIK 303 (330)
Q Consensus 298 iw~~~~ 303 (330)
+|+...
T Consensus 360 iw~~~~ 365 (420)
T 3vl1_A 360 LDIISD 365 (420)
T ss_dssp EEEECC
T ss_pred EEeccC
Confidence 998553
No 39
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-43 Score=299.09 Aligned_cols=279 Identities=16% Similarity=0.254 Sum_probs=241.0
Q ss_pred CcccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEE
Q psy6213 3 YLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWN 80 (330)
Q Consensus 3 H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~ 80 (330)
|.+.|++++|+|++++++++ ||.|++|| .+++....+..+. ..|.+++|+| ++++|++++.||.|++||
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~-------~~v~~~~~~~-~~~~l~~~~~d~~i~iwd 177 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHR-------APIVSVKWNK-DGTHIISMDVENVTILWN 177 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCC-------SCEEEEEECT-TSSEEEEEETTCCEEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCC-------ccEEEEEECC-CCCEEEEEecCCeEEEEE
Confidence 67899999999999995555 99999999 5555555544332 3479999999 999999999999999999
Q ss_pred CCCCCCCceeEEecccccc---------------eeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEE
Q psy6213 81 LGQISRSKQERVFNDHKRT---------------VNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRD 145 (330)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~---------------i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~ 145 (330)
+.+ .+....+..+... +.++.|+| + ..+++++.+|.|++||+++++.+..+..|...|.+
T Consensus 178 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~ 252 (425)
T 1r5m_A 178 VIS---GTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD-D-DKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISV 252 (425)
T ss_dssp TTT---TEEEEEECCC---------------CCCBSCCEEEE-T-TEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEE
T ss_pred CCC---CcEEEEeeccccCccceeeccccCCcceeeEEEEcC-C-CEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEE
Confidence 987 6777777777766 99999997 4 66999999999999999999999999899999999
Q ss_pred EEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceecc
Q psy6213 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINT 225 (330)
Q Consensus 146 ~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 225 (330)
++|+|+++ .+++++.||.|++||+++ .+....+..|...|.+++|+|++ ++++++.|+.|++||+++++.......+
T Consensus 253 ~~~~~~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 329 (425)
T 1r5m_A 253 LEFNDTNK-LLLSASDDGTLRIWHGGN-GNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVD 329 (425)
T ss_dssp EEEETTTT-EEEEEETTSCEEEECSSS-BSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECT
T ss_pred EEECCCCC-EEEEEcCCCEEEEEECCC-CccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccC
Confidence 99999998 699999999999999998 66777888899999999999999 9999999999999999998777777778
Q ss_pred ccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCC-------------------ccceEeecCCC--CeEEEEEecCC
Q psy6213 226 IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY-------------------IPLASFTEHKD--VVSGLAWRGDP 284 (330)
Q Consensus 226 ~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~-------------------~~~~~~~~~~~--~v~~~~~~~~~ 284 (330)
...+.+++|+|+++++++ ++ .||.|++||+++.. .++..+..|.. .|.+++|+|++
T Consensus 330 ~~~i~~~~~s~~~~~l~~-~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 406 (425)
T 1r5m_A 330 GVPIFAGRISQDGQKYAV-AF--MDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAG 406 (425)
T ss_dssp TCCEEEEEECTTSSEEEE-EE--TTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTS
T ss_pred CccEEEEEEcCCCCEEEE-EE--CCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCC
Confidence 889999999999997554 44 59999999998765 13778888876 99999999999
Q ss_pred CEEEEeecCCeEeeeec
Q psy6213 285 QLFIASSRVSIIPRAKN 301 (330)
Q Consensus 285 ~~l~s~~~dg~i~iw~~ 301 (330)
++|++++.||.|++|+.
T Consensus 407 ~~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 407 NKISVAYSLQEGSVVAI 423 (425)
T ss_dssp SEEEEEESSSCCEEEEC
T ss_pred ceEEEEecCceEEEEee
Confidence 99999999999999975
No 40
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.3e-42 Score=293.07 Aligned_cols=281 Identities=20% Similarity=0.362 Sum_probs=238.3
Q ss_pred ceEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCC
Q psy6213 7 VHKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQIS 85 (330)
Q Consensus 7 v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 85 (330)
++.|+||++ ++|++| |++|+|||..+++....+..+.+ ...|++++|+| ++++|++|+.||.|++||+.+
T Consensus 108 ~~~l~wS~~-n~lAvgld~tV~lWd~~tg~~~~~~~~~~~-----~~~V~sv~fsp-dg~~lasgs~Dg~v~iWd~~~-- 178 (420)
T 4gga_A 108 LNLVDWSSG-NVLAVALDNSVYLWSASSGDILQLLQMEQP-----GEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQ-- 178 (420)
T ss_dssp CBCEEECTT-SEEEEEETTEEEEEETTTCCEEEEEECCST-----TCCEEEEEECT-TSSEEEEEETTSCEEEEETTT--
T ss_pred ceeEEECCC-CEEEEEeCCEEEEEECCCCCEEEEEEecCC-----CCcEEEEEECC-CCCEEEEEECCCeEEEEEcCC--
Confidence 567999975 478888 99999999999998877665433 23379999999 999999999999999999988
Q ss_pred CCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecC-ceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCc
Q psy6213 86 RSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQ-ESTKIFHSNTESVRDVEFNPHSPYAFASVSENGT 164 (330)
Q Consensus 86 ~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~ 164 (330)
.+.+..+.+|...+.++.++ +.++++|+.|+.+++||.... ..+..+.+|...+..+.++|++. .+++++.|+.
T Consensus 179 -~~~~~~~~~h~~~v~~~s~~---~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~-~l~s~~~D~~ 253 (420)
T 4gga_A 179 -QKRLRNMTSHSARVGSLSWN---SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNL 253 (420)
T ss_dssp -TEEEEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSC
T ss_pred -CcEEEEEeCCCCceEEEeeC---CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCC-eeeeeecccc
Confidence 78888999999999998875 579999999999999998764 44677888999999999999998 6999999999
Q ss_pred EEEEecCCCcc---ceeeeccCCCCeEEEEEcCCC-CEEEEE--ecCCcEEEEeCCCCccccceeccccceEEEEEcCCC
Q psy6213 165 IQQWDVRRPEK---CFYQFTAHSGPIFACDWHPEH-AWLATA--SRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQR 238 (330)
Q Consensus 165 i~i~d~~~~~~---~~~~~~~~~~~i~~~~~~~~~-~~l~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 238 (330)
+++||..++.. .+.....|...|.+++|+|.+ .+++++ +.|+.|++||+.+++... .......+.++.|+|++
T Consensus 254 v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~-~~~~~~~v~~~~~~~~~ 332 (420)
T 4gga_A 254 VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS-AVDAHSQVCSILWSPHY 332 (420)
T ss_dssp EEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEE-EEECSSCEEEEEEETTT
T ss_pred ceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccce-eeccccceeeeeecCCC
Confidence 99999986432 345667789999999999965 455554 479999999999985443 44456789999999999
Q ss_pred CeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeeccce
Q psy6213 239 KFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIKI 304 (330)
Q Consensus 239 ~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~ 304 (330)
+.++++++ ..|+.|++||+.+++. +..+.+|.+.|++++|+|||++|+||+.||+|++|+..+.
T Consensus 333 ~~lv~~sg-~~d~~I~iwd~~~~~~-v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~ 396 (420)
T 4gga_A 333 KELISGHG-FAQNQLVIWKYPTMAK-VAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 396 (420)
T ss_dssp TEEEEEEC-TTTCCEEEEETTTCCE-EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCS
T ss_pred CeEEEEEe-cCCCEEEEEECCCCcE-EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 98766543 1589999999999876 8899999999999999999999999999999999986543
No 41
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=5.5e-42 Score=291.15 Aligned_cols=293 Identities=15% Similarity=0.243 Sum_probs=237.5
Q ss_pred CCcccceEEEEee-CCCeeecC--CCeEEEEEcCCcceeeeeceee------ccccccccceeeeeecccCCcEEEEEcC
Q psy6213 2 AYLSPVHKHGLKA-DNGLAQPS--RNVFKIFLIKDTEFVETHNLRV------GKNINLNFSCNDVAWSCIEENHIATGAT 72 (330)
Q Consensus 2 ~H~~~v~~~~~s~-~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~------~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 72 (330)
.|.++|++++|+| +++++++| ||.|++||+.+++......... .....+...|.+++|+|.++.+|++++.
T Consensus 41 ~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 120 (408)
T 4a11_B 41 IHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSF 120 (408)
T ss_dssp CCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEET
T ss_pred ccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeC
Confidence 5999999999999 99995554 9999999999876554443211 1112345668999999977789999999
Q ss_pred CCcEEEEECCCCCCCceeEEecccccceeEEEEEec--CCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcC
Q psy6213 73 NGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYV--ESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNP 150 (330)
Q Consensus 73 dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~ 150 (330)
||.|++||+.+ .+....+. +...+.++.++|. ++.++++++.|+.|++||+++++.+..+..|...|.+++|+|
T Consensus 121 d~~i~iwd~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~ 196 (408)
T 4a11_B 121 DKTLKVWDTNT---LQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSP 196 (408)
T ss_dssp TSEEEEEETTT---TEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECS
T ss_pred CCeEEEeeCCC---Cccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECC
Confidence 99999999987 55555554 7788999999874 334999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEecCCcEEEEecCCCccceeee---------------ccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCC
Q psy6213 151 HSPYAFASVSENGTIQQWDVRRPEKCFYQF---------------TAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSI 215 (330)
Q Consensus 151 ~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~---------------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 215 (330)
++++++++++.||.|++||+++.......+ ..|...|.+++|+|++++|++++.||.|++||+++
T Consensus 197 ~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (408)
T 4a11_B 197 RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSN 276 (408)
T ss_dssp SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCC
Confidence 999889999999999999998755444444 56889999999999999999999999999999998
Q ss_pred Cccccceecc-----ccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEe
Q psy6213 216 KPSLEYSINT-----IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIAS 290 (330)
Q Consensus 216 ~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 290 (330)
++.......+ ...+........+..+++++. ++.|++||+.+++. +..+.+|...|.+++|+|++++|+++
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~v~d~~~~~~-~~~~~~~~~~v~~~~~s~~~~~l~s~ 352 (408)
T 4a11_B 277 GENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPY---GSTIAVYTVYSGEQ-ITMLKGHYKTVDCCVFQSNFQELYSG 352 (408)
T ss_dssp CCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEE---TTEEEEEETTTCCE-EEEECCCSSCEEEEEEETTTTEEEEE
T ss_pred CccceeccccccccccccceeEEecCCCceEEEEec---CCEEEEEECcCCcc-eeeeccCCCeEEEEEEcCCCCEEEEE
Confidence 7553322211 112222222333444466654 99999999998876 88899999999999999999999999
Q ss_pred ecCCeEeeeecc
Q psy6213 291 SRVSIIPRAKNI 302 (330)
Q Consensus 291 ~~dg~i~iw~~~ 302 (330)
+.||.|++|+..
T Consensus 353 ~~dg~i~iw~~~ 364 (408)
T 4a11_B 353 SRDCNILAWVPS 364 (408)
T ss_dssp ETTSCEEEEEEC
T ss_pred CCCCeEEEEeCC
Confidence 999999999865
No 42
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.6e-42 Score=285.76 Aligned_cols=282 Identities=17% Similarity=0.248 Sum_probs=235.2
Q ss_pred CcccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEE
Q psy6213 3 YLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWN 80 (330)
Q Consensus 3 H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~ 80 (330)
|.++|.+++|+|||++++++ ++.+..|............ .+...|.+++|+| ++++|++++ ||.|++|+
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~h~~~v~~~~~~~-~~~~l~~~~-dg~i~iw~ 78 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTL-------NHGEVVCAVTISN-PTRHVYTGG-KGCVKVWD 78 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEE-------CCSSCCCEEEECS-SSSEEEEEC-BSEEEEEE
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceec-------cCCCceEEEEEec-CCcEEEEcC-CCeEEEEE
Confidence 56789999999999996555 6666666444322221111 2334479999999 999999999 99999999
Q ss_pred CCCCCCCceeEEec--ccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCc--eeeeeecCCCCeEEEEEcCCCCcEE
Q psy6213 81 LGQISRSKQERVFN--DHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQE--STKIFHSNTESVRDVEFNPHSPYAF 156 (330)
Q Consensus 81 ~~~~~~~~~~~~~~--~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~ 156 (330)
+.+.........+. .|...|.+++|+| +++++++++.|+.|++||+++++ ....+..|...+.+++|+|+++ .+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l 156 (337)
T 1gxr_A 79 ISHPGNKSPVSQLDCLNRDNYIRSCKLLP-DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSK-VC 156 (337)
T ss_dssp TTSTTCCSCSEEEECSCTTSBEEEEEECT-TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSS-EE
T ss_pred CCCCCceeeeecccccCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCC-EE
Confidence 98754444444444 7889999999998 89999999999999999999877 5666778889999999999998 68
Q ss_pred EEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcC
Q psy6213 157 ASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRP 236 (330)
Q Consensus 157 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~ 236 (330)
++++.||.|++||+++ .+....+..|...+.+++|+|++++|++++.||.|++||+++++.. ....+...+.+++|+|
T Consensus 157 ~~~~~dg~v~~~d~~~-~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~-~~~~~~~~v~~~~~s~ 234 (337)
T 1gxr_A 157 FSCCSDGNIAVWDLHN-QTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQL-QQHDFTSQIFSLGYCP 234 (337)
T ss_dssp EEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE-EEEECSSCEEEEEECT
T ss_pred EEEeCCCcEEEEeCCC-CceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceE-eeecCCCceEEEEECC
Confidence 9999999999999998 6677888889999999999999999999999999999999988443 3345678899999999
Q ss_pred CCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 237 QRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 237 ~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
+++++++++ .++.|++||+++++ ...+..|...|.+++|+|++++|++++.||.|++|+..
T Consensus 235 ~~~~l~~~~---~~~~i~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~ 295 (337)
T 1gxr_A 235 TGEWLAVGM---ESSNVEVLHVNKPD--KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP 295 (337)
T ss_dssp TSSEEEEEE---TTSCEEEEETTSSC--EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCEEEEEc---CCCcEEEEECCCCC--eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECC
Confidence 999755554 59999999999876 45678899999999999999999999999999999854
No 43
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.5e-42 Score=290.31 Aligned_cols=279 Identities=17% Similarity=0.306 Sum_probs=233.6
Q ss_pred ceEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCC
Q psy6213 7 VHKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQIS 85 (330)
Q Consensus 7 v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 85 (330)
+.+++|++ +.+++++ |+.|++||+.+++........ ....|.+++|+| ++++|++|+.||.|++||+.+
T Consensus 96 ~~~~~~s~-~~l~~~~~d~~v~lw~~~~~~~~~~~~~~------~~~~v~~v~~s~-~~~~l~~~~~dg~i~iwd~~~-- 165 (401)
T 4aez_A 96 LNLLDWSN-LNVVAVALERNVYVWNADSGSVSALAETD------ESTYVASVKWSH-DGSFLSVGLGNGLVDIYDVES-- 165 (401)
T ss_dssp CBCEEECT-TSEEEEEETTEEEEEETTTCCEEEEEECC------TTCCEEEEEECT-TSSEEEEEETTSCEEEEETTT--
T ss_pred EEEEeecC-CCEEEEECCCeEEEeeCCCCcEeEeeecC------CCCCEEEEEECC-CCCEEEEECCCCeEEEEECcC--
Confidence 33455554 3347777 999999999998876655442 233479999999 999999999999999999988
Q ss_pred CCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEee-cCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCc
Q psy6213 86 RSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGT 164 (330)
Q Consensus 86 ~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~ 164 (330)
.+....+..|...|.+++|+ ++++++++.||.|++||++ .......+..|...|.+++|+|+++ .+++++.||.
T Consensus 166 -~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~ 240 (401)
T 4aez_A 166 -QTKLRTMAGHQARVGCLSWN---RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGL-QLASGGNDNV 240 (401)
T ss_dssp -CCEEEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSC
T ss_pred -CeEEEEecCCCCceEEEEEC---CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCC-EEEEEeCCCe
Confidence 67888888999999999995 5799999999999999998 4666788888999999999999998 6999999999
Q ss_pred EEEEecCCCccceeeeccCCCCeEEEEEcCCC-CEEEEEe--cCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeE
Q psy6213 165 IQQWDVRRPEKCFYQFTAHSGPIFACDWHPEH-AWLATAS--RDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFH 241 (330)
Q Consensus 165 i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 241 (330)
|++||+++ ......+..|...|.+++|+|++ .++++++ .|+.|++||+++++... ...+...+.+++|+|+++++
T Consensus 241 v~iwd~~~-~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~-~~~~~~~v~~~~~s~~~~~l 318 (401)
T 4aez_A 241 VQIWDARS-SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVN-TVDAGSQVTSLIWSPHSKEI 318 (401)
T ss_dssp EEEEETTC-SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEE-EEECSSCEEEEEECSSSSEE
T ss_pred EEEccCCC-CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEE-EEeCCCcEEEEEECCCCCeE
Confidence 99999998 66777888899999999999976 4566655 79999999999885443 44567889999999999986
Q ss_pred EEEeecccCCeEEEEEccCCCc-cceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeeccc
Q psy6213 242 LASCSLVVDSSVNVWDIRRPYI-PLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIK 303 (330)
Q Consensus 242 ~~~~~~~~~~~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 303 (330)
+++++ ..||.|++||+.++.. ....+.+|...|.+++|+|++++|++++.||.|++|+...
T Consensus 319 ~~~~g-~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 319 MSTHG-FPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp EEEEC-TTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred EEEee-cCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 66531 1599999999998643 2345678999999999999999999999999999998653
No 44
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.5e-43 Score=291.45 Aligned_cols=250 Identities=17% Similarity=0.244 Sum_probs=205.7
Q ss_pred CCcccceEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWN 80 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~ 80 (330)
.|.+.|++++|+|++++++++ ||.|+|||+.+++........ ...+...|.+++|+| ++++|++|+.||.|++||
T Consensus 92 ~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~---~~~h~~~V~~v~~sp-dg~~l~sgs~dg~v~iwd 167 (357)
T 4g56_B 92 QTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFA---KYEHDDIVKTLSVFS-DGTQAVSGGKDFSVKVWD 167 (357)
T ss_dssp ECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEE---ECCCSSCEEEEEECS-SSSEEEEEETTSCEEEEE
T ss_pred CCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeec---cCCCCCCEEEEEECC-CCCEEEEEeCCCeEEEEE
Confidence 478899999999999998888 999999999987654433322 122345589999999 999999999999999999
Q ss_pred CCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeee--cCCCCeEEEEEcCCCCcEEEE
Q psy6213 81 LGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFH--SNTESVRDVEFNPHSPYAFAS 158 (330)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~ 158 (330)
+.+ .+....+..|...|.+++|+|.+..++++++.|+.|++||++++++...+. .+...+.+++|+|++..++++
T Consensus 168 ~~~---~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~ 244 (357)
T 4g56_B 168 LSQ---KAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFAC 244 (357)
T ss_dssp TTT---TEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEE
T ss_pred CCC---CcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEE
Confidence 988 788888999999999999998555789999999999999999888766554 466789999999998778999
Q ss_pred EecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCC-CEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcC-
Q psy6213 159 VSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEH-AWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRP- 236 (330)
Q Consensus 159 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~- 236 (330)
|+.|+.|++||+++ .+....+..|...|++++|+|++ ++|++++.|++|++||+++++. .....|...|++++|+|
T Consensus 245 g~~d~~i~~wd~~~-~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~-~~~~~H~~~V~~vafsP~ 322 (357)
T 4g56_B 245 GDETGNVSLVNIKN-PDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEV-FRDLSHRDFVTGVAWSPL 322 (357)
T ss_dssp EESSSCEEEEESSC-GGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEE-EEECCCSSCEEEEEECSS
T ss_pred eecccceeEEECCC-CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcE-eEECCCCCCEEEEEEeCC
Confidence 99999999999998 66788899999999999999987 5799999999999999998844 44567889999999999
Q ss_pred CCCeEEEEeecccCCeEEEEEccCCCc
Q psy6213 237 QRKFHLASCSLVVDSSVNVWDIRRPYI 263 (330)
Q Consensus 237 ~~~~l~~~~~~~~~~~i~i~d~~~~~~ 263 (330)
++.+ +++++ .|+.|++|++.....
T Consensus 323 d~~~-l~s~s--~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 323 DHSK-FTTVG--WDHKVLHHHLPSEGR 346 (357)
T ss_dssp STTE-EEEEE--TTSCEEEEECC----
T ss_pred CCCE-EEEEc--CCCeEEEEECCCCCc
Confidence 6775 66766 799999999976543
No 45
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=278.07 Aligned_cols=280 Identities=19% Similarity=0.341 Sum_probs=235.3
Q ss_pred ceEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCC
Q psy6213 7 VHKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQIS 85 (330)
Q Consensus 7 v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 85 (330)
.++|+||+++ +|++| |++|+|||+++++....+..+.+. ..|++++|+| ++++|++|+.||.|++|++++
T Consensus 28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~-----~~V~~v~~~~-~~~~l~sgs~Dg~v~iw~~~~-- 98 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQMEQPG-----EYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQ-- 98 (318)
T ss_dssp CBCEEECTTS-EEEEEETTEEEEEETTTCCEEEEEECCSTT-----CCEEEEEECT-TSSEEEEEETTSEEEEEETTT--
T ss_pred ceEEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEecCCC-----CeEEEEEECC-CCCEEEEEECCCcEEEeecCC--
Confidence 4679999886 77778 999999999999988776654332 3379999999 999999999999999999998
Q ss_pred CCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCc-eeeeeecCCCCeEEEEEcCCCCcEEEEEecCCc
Q psy6213 86 RSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQE-STKIFHSNTESVRDVEFNPHSPYAFASVSENGT 164 (330)
Q Consensus 86 ~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~ 164 (330)
.+.+..+.+|...+.++.+ ++..+++++.++.+++|+..... .+..+.+|...+..+.+.++++ .+++++.||.
T Consensus 99 -~~~~~~~~~h~~~~~~~~~---~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~~~d~~ 173 (318)
T 4ggc_A 99 -QKRLRNMTSHSARVGSLSW---NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR-HLASGGNDNL 173 (318)
T ss_dssp -TEEEEEEECCSSCEEEEEE---ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-EEEEEETTSC
T ss_pred -ceeEEEecCccceEEEeec---CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCC-EEEEEecCcc
Confidence 7888889999988887665 46799999999999999987654 4567788999999999999998 6999999999
Q ss_pred EEEEecCCCcc---ceeeeccCCCCeEEEEEcCCCCE---EEEEecCCcEEEEeCCCCccccceeccccceEEEEEcCCC
Q psy6213 165 IQQWDVRRPEK---CFYQFTAHSGPIFACDWHPEHAW---LATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQR 238 (330)
Q Consensus 165 i~i~d~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~---l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 238 (330)
|++||++++.. .......+.+.|.++.++|++.. +++++.++.|++||.+... ......+...+..+.|+|++
T Consensus 174 i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~-~~~~~~~~~~v~~~~~~~~~ 252 (318)
T 4ggc_A 174 VNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA-CLSAVDAHSQVCSILWSPHY 252 (318)
T ss_dssp EEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC-EEEEEECSSCEEEEEEETTT
T ss_pred eeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc-ccccccceeeeeeeeecccc
Confidence 99999987432 23445567889999999997653 3456688999999998874 44445567889999999999
Q ss_pred CeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeeccc
Q psy6213 239 KFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIK 303 (330)
Q Consensus 239 ~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 303 (330)
..++++++ ..|+.|++||+++++. +..+.+|.+.|++++|+|++++|++|+.||+|++|+..+
T Consensus 253 ~~~~~~sg-~~d~~i~iwd~~~~~~-~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 253 KELISGHG-FAQNQLVIWKYPTMAK-VAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp TEEEEEEC-TTTCCEEEEETTTCCE-EEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred cceEEEEE-cCCCEEEEEECCCCcE-EEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 98665542 1589999999999876 889999999999999999999999999999999998654
No 46
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.3e-43 Score=303.76 Aligned_cols=294 Identities=9% Similarity=0.074 Sum_probs=223.5
Q ss_pred CcccceEEEEeeCC---------Ceeec-------------------C--CCeEEEEEcCCcceeeeeceeecccccccc
Q psy6213 3 YLSPVHKHGLKADN---------GLAQP-------------------S--RNVFKIFLIKDTEFVETHNLRVGKNINLNF 52 (330)
Q Consensus 3 H~~~v~~~~~s~~~---------~~~~~-------------------g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~ 52 (330)
+.+.|.+|+|+|++ +++++ + |++|+||++++++........ ......
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~---l~~~~~ 208 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQT---IVHSFG 208 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEE---EEECCC
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEE---EEecCC
Confidence 56789999999987 45333 3 789999999887643211100 011123
Q ss_pred ceeeeeeccc-----CCcEEEEEcCCCcEEEEECCCCCCC--------ceeEEecccccceeEEEEEecCCCEEEEEecC
Q psy6213 53 SCNDVAWSCI-----EENHIATGATNGAVVVWNLGQISRS--------KQERVFNDHKRTVNKVSFHYVESNWLISGSQD 119 (330)
Q Consensus 53 ~v~~~~~~~~-----~~~~l~~~~~dg~i~iw~~~~~~~~--------~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d 119 (330)
.|.+++|+|. ++.+||+++.||+|++||+...... .+...+.+|...|.+++|+| + ..|++|+.|
T Consensus 209 ~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~-~-~~lasgs~D 286 (524)
T 2j04_B 209 EVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS-P-TTVVCGFKN 286 (524)
T ss_dssp SEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS-S-SEEEEEETT
T ss_pred cEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC-C-CeEEEEeCC
Confidence 4799999993 2579999999999999999763211 12346778999999999997 4 589999999
Q ss_pred CcEEEEEeecCc-eeeeeecCCCCeEEE--EEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCC--CeEEEEEcC
Q psy6213 120 GTMRLFDIRCQE-STKIFHSNTESVRDV--EFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSG--PIFACDWHP 194 (330)
Q Consensus 120 ~~i~i~d~~~~~-~~~~~~~~~~~v~~~--~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--~i~~~~~~~ 194 (330)
|+|++||+++++ +...+..|...|.++ +|+|++..+|++++.|++|++||+++ .+....+.+|.. .+.+++|+|
T Consensus 287 gtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~-~~~~~~~~~~~~~~~v~~v~fsp 365 (524)
T 2j04_B 287 GFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD-IATTKTTVSRFRGSNLVPVVYCP 365 (524)
T ss_dssp SEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG-HHHHCEEEEECSCCSCCCEEEET
T ss_pred CEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC-CCcccccccccccCcccceEeCC
Confidence 999999998764 455688899999999 56787734799999999999999997 455556666653 588999999
Q ss_pred CCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCC------------
Q psy6213 195 EHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY------------ 262 (330)
Q Consensus 195 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~------------ 262 (330)
+++.+++++.|++|++||++++........|...|.+++|+|++++ +++++ .|++|++||+....
T Consensus 366 ~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~-l~Sgs--~Dgtv~lwd~~~~~~~~~~~~~~~~~ 442 (524)
T 2j04_B 366 QIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPM-VLAGS--ADGSLIITNAARRLLHGIKNSSATQK 442 (524)
T ss_dssp TTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCB-CEEEE--TTTEEECCBSCSSTTTCC------CC
T ss_pred CcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCe-EEEEE--CCCEEEEEechHhhccccccCcccee
Confidence 9999999999999999999998776667789999999999999997 55555 69999999853210
Q ss_pred -------------------------------ccceEeecCCCCeEEEEEecCC---CEEEEeecCCeEeeeecccee
Q psy6213 263 -------------------------------IPLASFTEHKDVVSGLAWRGDP---QLFIASSRVSIIPRAKNIKIF 305 (330)
Q Consensus 263 -------------------------------~~~~~~~~~~~~v~~~~~~~~~---~~l~s~~~dg~i~iw~~~~~~ 305 (330)
..+..+.+|...|.+++|+|++ ..+|+|+.||.|+||+.....
T Consensus 443 ~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~l~~~~ 519 (524)
T 2j04_B 443 SLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEYLSLEH 519 (524)
T ss_dssp CCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEECSCC-
T ss_pred eeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEEccccc
Confidence 0122345678899999999985 499999999999999876443
No 47
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-43 Score=301.97 Aligned_cols=284 Identities=14% Similarity=0.239 Sum_probs=224.1
Q ss_pred CCcccceEEEEee-CCCeeecC--CCeEEEEEcCC---cceee-eeceeeccccccccceeeeeecccCCcEEEEEcCCC
Q psy6213 2 AYLSPVHKHGLKA-DNGLAQPS--RNVFKIFLIKD---TEFVE-THNLRVGKNINLNFSCNDVAWSCIEENHIATGATNG 74 (330)
Q Consensus 2 ~H~~~v~~~~~s~-~~~~~~~g--d~~i~iw~~~~---~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 74 (330)
.|.++|++++|+| +++++++| ||.|++||+.+ +.... ... ..+...|.+++|+| ++++|++|+.||
T Consensus 61 ~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~------~~h~~~v~~~~~~~-~~~~l~s~s~dg 133 (437)
T 3gre_A 61 NEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLT------YDCSSTVTQITMIP-NFDAFAVSSKDG 133 (437)
T ss_dssp TTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEE------EECSSCEEEEEECT-TSSEEEEEETTS
T ss_pred CCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeee------ccCCCCEEEEEEeC-CCCEEEEEeCCC
Confidence 4889999999999 99995554 99999999976 33111 111 12345589999999 999999999999
Q ss_pred cEEEEECCCCCCCceeEEecc------------cccceeEEE--EEecCCCEEEEEecCCcEEEEEeecCceeeeeec--
Q psy6213 75 AVVVWNLGQISRSKQERVFND------------HKRTVNKVS--FHYVESNWLISGSQDGTMRLFDIRCQESTKIFHS-- 138 (330)
Q Consensus 75 ~i~iw~~~~~~~~~~~~~~~~------------~~~~i~~i~--~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-- 138 (330)
.|++||++.....+....... +...+.++. ++| ++.+|++++.|+.|++||+++++.+..+..
T Consensus 134 ~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 212 (437)
T 3gre_A 134 QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE-EKSLLVALTNLSRVIIFDIRTLERLQIIENSP 212 (437)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS-SCEEEEEEETTSEEEEEETTTCCEEEEEECCG
T ss_pred EEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC-CCCEEEEEeCCCeEEEEeCCCCeeeEEEccCC
Confidence 999999952111333332221 445566666 345 788999999999999999999999999987
Q ss_pred CCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeec-cCCCCeEEEEEcC----CCCEEEEEecCCcEEEEeC
Q psy6213 139 NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFT-AHSGPIFACDWHP----EHAWLATASRDKTIKVWDL 213 (330)
Q Consensus 139 ~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~i~~~~~~~----~~~~l~~~~~dg~i~i~d~ 213 (330)
|...|++++|+|++. .+++++.||.|++||+++ .+++..+. .|..+|.+++|+| ++.+|++++.||.|++||+
T Consensus 213 h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~ 290 (437)
T 3gre_A 213 RHGAVSSICIDEECC-VLILGTTRGIIDIWDIRF-NVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNF 290 (437)
T ss_dssp GGCCEEEEEECTTSC-EEEEEETTSCEEEEETTT-TEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEET
T ss_pred CCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCC-ccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEc
Confidence 789999999999988 699999999999999998 66666665 6788999996654 6789999999999999999
Q ss_pred CCCcccccee--------------------------ccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceE
Q psy6213 214 SIKPSLEYSI--------------------------NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLAS 267 (330)
Q Consensus 214 ~~~~~~~~~~--------------------------~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~ 267 (330)
++++...... .+...|.+++|+ ++++ +++++ .|+.|++||+.+++. ...
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~-l~s~~--~d~~i~~wd~~~~~~-~~~ 365 (437)
T 3gre_A 291 VKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKI-LLTDE--ATSSIVMFSLNELSS-SKA 365 (437)
T ss_dssp TTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEE-EEEEG--GGTEEEEEETTCGGG-CEE
T ss_pred CCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceE-EEecC--CCCeEEEEECCCccc-ceE
Confidence 8775432222 155678999999 6665 55555 699999999998765 444
Q ss_pred eec-------------------------------------CCCCeEEEEEecC--CCEEEEeecCCeEeeee
Q psy6213 268 FTE-------------------------------------HKDVVSGLAWRGD--PQLFIASSRVSIIPRAK 300 (330)
Q Consensus 268 ~~~-------------------------------------~~~~v~~~~~~~~--~~~l~s~~~dg~i~iw~ 300 (330)
+.+ |...|++++|+++ +.+|++++.||.|++|+
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 366 VISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp EECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred EecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 443 8899999999998 88999999999999995
No 48
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.3e-41 Score=276.70 Aligned_cols=247 Identities=17% Similarity=0.261 Sum_probs=206.7
Q ss_pred ccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEec-CCCEEEEEecCCcEEEEEeec
Q psy6213 51 NFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYV-ESNWLISGSQDGTMRLFDIRC 129 (330)
Q Consensus 51 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~~~~l~~~~~d~~i~i~d~~~ 129 (330)
...|.+++|+| ++++|++|+.|+.|++||+... ..+....+.+|.++|.+++|+|. ++++|++|+.|++|++||+++
T Consensus 9 ~~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~-~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~ 86 (297)
T 2pm7_B 9 NEMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGE-THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEEN 86 (297)
T ss_dssp SSCEEEEEECT-TSSEEEEEETTSCEEEEEBCSS-CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSS
T ss_pred cCceEEEEECC-CCCEEEEEeCCCEEEEEecCCC-CcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCC
Confidence 34479999999 9999999999999999999752 24567788999999999999863 478999999999999999987
Q ss_pred Cc--eeeeeecCCCCeEEEEEcCC--CCcEEEEEecCCcEEEEecCCCcc-ceeeeccCCCCeEEEEEcCC---------
Q psy6213 130 QE--STKIFHSNTESVRDVEFNPH--SPYAFASVSENGTIQQWDVRRPEK-CFYQFTAHSGPIFACDWHPE--------- 195 (330)
Q Consensus 130 ~~--~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~~~~--------- 195 (330)
++ .+..+..|...|.+++|+|+ +. ++++++.|+.|++||+++... ....+.+|...|.+++|+|+
T Consensus 87 ~~~~~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~ 165 (297)
T 2pm7_B 87 GRWSQIAVHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHN 165 (297)
T ss_dssp SCBCCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC--------
T ss_pred CceEEEEEeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCC
Confidence 74 55667779999999999997 66 699999999999999987432 24567789999999999997
Q ss_pred ----CCEEEEEecCCcEEEEeCCCCcc----ccceeccccceEEEEEcCCC--CeEEEEeecccCCeEEEEEccCCCcc-
Q psy6213 196 ----HAWLATASRDKTIKVWDLSIKPS----LEYSINTIASVSRIKWRPQR--KFHLASCSLVVDSSVNVWDIRRPYIP- 264 (330)
Q Consensus 196 ----~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~~~--~~l~~~~~~~~~~~i~i~d~~~~~~~- 264 (330)
+++|++++.|+.|++||+++.+. ......|...|.+++|+|++ ..++++++ .|+.|++||++....+
T Consensus 166 ~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s--~D~~v~iWd~~~~~~~~ 243 (297)
T 2pm7_B 166 GTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVS--QDRTCIIWTQDNEQGPW 243 (297)
T ss_dssp ----CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE--TTSCEEEEEESSTTSCC
T ss_pred CCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEE--CCCcEEEEEeCCCCCcc
Confidence 57999999999999999987642 33445688999999999996 33577777 7999999999875321
Q ss_pred -ceEe--ecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 265 -LASF--TEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 265 -~~~~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
...+ ..|...|.+++|+|++++|++++.||.|++|+..
T Consensus 244 ~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 244 KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred ceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 1223 4678899999999999999999999999999754
No 49
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=6.7e-43 Score=292.14 Aligned_cols=289 Identities=11% Similarity=0.072 Sum_probs=213.5
Q ss_pred ccceEEEEeeCCCeeecC--C-------CeEEEEEcCCcceeeeeceeecc---ccccccceeeeeecccCCcEEEEE--
Q psy6213 5 SPVHKHGLKADNGLAQPS--R-------NVFKIFLIKDTEFVETHNLRVGK---NINLNFSCNDVAWSCIEENHIATG-- 70 (330)
Q Consensus 5 ~~v~~~~~s~~~~~~~~g--d-------~~i~iw~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~~~~l~~~-- 70 (330)
-||++++|+|||++|++| + +.|++|+++.+............ .......+.+++++ ++.+++|
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~---~~~~~~g~~ 91 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS---KGIILVGCN 91 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE---TTEEEEECC
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC---CCEEEEEEC
Confidence 489999999999996654 2 35999999875432221111111 11122334666554 4566655
Q ss_pred ---------cCCCcEEEEECCCCCCC-ceeEEe-----cccccceeEEEEEecCCCEEEEE--ecCCcEEEEEeecCcee
Q psy6213 71 ---------ATNGAVVVWNLGQISRS-KQERVF-----NDHKRTVNKVSFHYVESNWLISG--SQDGTMRLFDIRCQEST 133 (330)
Q Consensus 71 ---------~~dg~i~iw~~~~~~~~-~~~~~~-----~~~~~~i~~i~~~~~~~~~l~~~--~~d~~i~i~d~~~~~~~ 133 (330)
+.|+.+++|++...... ...... ..+...+.+++|+| ++++++++ +.|++|++||+++++++
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~ 170 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLTEK 170 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT-TSSCEEEEESCSSCEEEEEETTTTEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCcEE
Confidence 45778999998663211 111111 23445688999999 88887654 47899999999999998
Q ss_pred eeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccce-eeeccCCCCeEEEEEcCCCCEEEEEecCC----cE
Q psy6213 134 KIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCF-YQFTAHSGPIFACDWHPEHAWLATASRDK----TI 208 (330)
Q Consensus 134 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~dg----~i 208 (330)
..+. |...|.+++|+|+++ ++++++.+ .+++|+..++.... .....|...+.+++|+|+++++++++.|+ .+
T Consensus 171 ~~~~-~~~~V~~v~fspdg~-~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i 247 (365)
T 4h5i_A 171 FEIE-TRGEVKDLHFSTDGK-VVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVL 247 (365)
T ss_dssp EEEE-CSSCCCEEEECTTSS-EEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEE
T ss_pred EEeC-CCCceEEEEEccCCc-eEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEE
Confidence 8886 778899999999998 57787754 56666666534332 34556888999999999999999999887 58
Q ss_pred EEEeCCCCcc----ccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceE-eecCCCCeEEEEEecC
Q psy6213 209 KVWDLSIKPS----LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLAS-FTEHKDVVSGLAWRGD 283 (330)
Q Consensus 209 ~i~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~-~~~~~~~v~~~~~~~~ 283 (330)
++||+..... ......+..+|++++|+|+|++ +++++ .|+.|+|||+++++. +.. +.+|...|++++|+||
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~-lasgs--~D~~V~iwd~~~~~~-~~~~~~gH~~~V~~v~fSpd 323 (365)
T 4h5i_A 248 TKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGEL-AVLAS--NDNSIALVKLKDLSM-SKIFKQAHSFAITEVTISPD 323 (365)
T ss_dssp EEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCE-EEEEE--TTSCEEEEETTTTEE-EEEETTSSSSCEEEEEECTT
T ss_pred eecccccceecceeeeeecCCCCCeEeEEECCCCCc-eEEEc--CCCEEEEEECCCCcE-EEEecCcccCCEEEEEECCC
Confidence 8899876643 2234457788999999999997 56666 699999999999876 554 5789999999999999
Q ss_pred CCEEEEeecCCeEeeeeccce
Q psy6213 284 PQLFIASSRVSIIPRAKNIKI 304 (330)
Q Consensus 284 ~~~l~s~~~dg~i~iw~~~~~ 304 (330)
|++||++|.|++|+||+....
T Consensus 324 g~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 324 STYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp SCEEEEEETTSEEEEEECCTT
T ss_pred CCEEEEEeCCCeEEEEEcCCC
Confidence 999999999999999986543
No 50
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.4e-41 Score=292.29 Aligned_cols=289 Identities=15% Similarity=0.248 Sum_probs=218.7
Q ss_pred CCcccceEEEEeeCCCeeecC--CCeEEEEEcCCcc-----------eeeeeceeecc-----ccccccceeeeeecccC
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTE-----------FVETHNLRVGK-----NINLNFSCNDVAWSCIE 63 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~-----------~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~ 63 (330)
.|.+.|++++|+|+|+++++| ||.|+||++.+++ ....+..|... ...+...|.+++|+| +
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~-~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP-Q 104 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC-C
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC-C
Confidence 578999999999999995555 9999999999866 23333333200 011124579999999 6
Q ss_pred C--cEEEEEcCCCcEEEEECCCCCCC------------------------------------ceeEE-ecccccceeEEE
Q psy6213 64 E--NHIATGATNGAVVVWNLGQISRS------------------------------------KQERV-FNDHKRTVNKVS 104 (330)
Q Consensus 64 ~--~~l~~~~~dg~i~iw~~~~~~~~------------------------------------~~~~~-~~~~~~~i~~i~ 104 (330)
+ .+|++++.||.|++||+...... ..... ..+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 6 79999999999999998651100 00112 367999999999
Q ss_pred EEecCCCEEEEEecCCcEEEEEeec-Cceee-------eeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCcc-
Q psy6213 105 FHYVESNWLISGSQDGTMRLFDIRC-QESTK-------IFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEK- 175 (330)
Q Consensus 105 ~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~-------~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~- 175 (330)
|+| ++++|++| .|+.|++||+++ ++... .+..|...|.+++|+|++..++++++.||.|++||+++...
T Consensus 185 ~~~-~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 185 INS-DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp ECT-TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred EcC-CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 999 89999998 799999999984 33443 35578899999999999844799999999999999998432
Q ss_pred --ceeeeccCCC------------CeEEEEEcCCCCEEEEEecCCcEEEEeCCC-Cccccceeccccc------------
Q psy6213 176 --CFYQFTAHSG------------PIFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTIAS------------ 228 (330)
Q Consensus 176 --~~~~~~~~~~------------~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~------------ 228 (330)
....+..|.. .|.+++|+|++++|++++. +.|++||++. ++.......+...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 341 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDC 341 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSG
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccc
Confidence 1567777765 8999999999999999999 9999999987 5444444444321
Q ss_pred ---eEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEee---------------------------------cCC
Q psy6213 229 ---VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFT---------------------------------EHK 272 (330)
Q Consensus 229 ---v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~---------------------------------~~~ 272 (330)
+..++|+|+++++ ++++ .||.|++||+.+++. + .+. .+.
T Consensus 342 i~~~~~~~~s~~~~~l-~s~s--~dg~v~iwd~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (447)
T 3dw8_B 342 IFDKFECCWNGSDSVV-MTGS--YNNFFRMFDRNTKRD-I-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFN 416 (447)
T ss_dssp GGCCCCEEECTTSSEE-EEEC--STTEEEEEETTTCCE-E-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTT
T ss_pred cccceEEEECCCCCEE-EEec--cCCEEEEEEcCCCcc-e-eeeecccccccccccCCccccccCCcccccccccccccC
Confidence 3349999999985 5555 699999999998764 2 222 234
Q ss_pred CCeEEEEEecCCCEEEEeecCCeEeeee
Q psy6213 273 DVVSGLAWRGDPQLFIASSRVSIIPRAK 300 (330)
Q Consensus 273 ~~v~~~~~~~~~~~l~s~~~dg~i~iw~ 300 (330)
..|..++|+|++++||+++.++ +++|.
T Consensus 417 ~~i~~~~~~p~~~~la~~~~~~-~~~~~ 443 (447)
T 3dw8_B 417 KKILHTAWHPKENIIAVATTNN-LYIFQ 443 (447)
T ss_dssp SCCCEEEECSSSSEEEEECSSC-EEEEE
T ss_pred CceeEEEECCCCCEEEEEecce-eeeec
Confidence 5788999999999999998876 77774
No 51
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=6e-41 Score=278.06 Aligned_cols=241 Identities=14% Similarity=0.278 Sum_probs=212.8
Q ss_pred cccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeec
Q psy6213 50 LNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC 129 (330)
Q Consensus 50 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (330)
+...|.+++|+| ++++|++|+.||.|++||..+ ......+..|...|.+++|+| +++++++|+.|+.+++||+.+
T Consensus 54 H~~~v~~~~~s~-d~~~l~s~s~Dg~v~iWd~~~---~~~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~d~~v~iw~~~~ 128 (340)
T 1got_B 54 HLAKIYAMHWGT-DSRLLLSASQDGKLIIWDSYT---TNKVHAIPLRSSWVMTCAYAP-SGNYVACGGLDNICSIYNLKT 128 (340)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTTEEEEEETTT---CCEEEEEECSSSCEEEEEECT-TSSEEEEEETTCEEEEEETTT
T ss_pred CCCceEEEEECC-CCCEEEEEeCCCcEEEEECCC---CCcceEeecCCccEEEEEECC-CCCEEEEEeCCCeEEEEECcc
Confidence 344579999999 999999999999999999987 677788889999999999999 899999999999999999976
Q ss_pred Cc----eeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecC
Q psy6213 130 QE----STKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRD 205 (330)
Q Consensus 130 ~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 205 (330)
.+ ....+.+|...|.++.|++++. +++++.|+.|++||+++ +.....+.+|.+.|.+++|+|+++++++++.|
T Consensus 129 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~--l~s~s~d~~i~~wd~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d 205 (340)
T 1got_B 129 REGNVRVSRELAGHTGYLSCCRFLDDNQ--IVTSSGDTTCALWDIET-GQQTTTFTGHTGDVMSLSLAPDTRLFVSGACD 205 (340)
T ss_dssp CSBSCEEEEEEECCSSCEEEEEEEETTE--EEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCcceeEEEecCCCccEEEEEECCCCc--EEEEECCCcEEEEECCC-CcEEEEEcCCCCceEEEEECCCCCEEEEEeCC
Confidence 53 4566778999999999999874 88999999999999998 66778889999999999999999999999999
Q ss_pred CcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEee--cCCCCeEEEEEecC
Q psy6213 206 KTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFT--EHKDVVSGLAWRGD 283 (330)
Q Consensus 206 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~~ 283 (330)
+.|++||++++........|...|.+++|+|++++ +++++ .|+.|++||++.++. +..+. .+...|.+++|+|+
T Consensus 206 ~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~-l~s~s--~d~~v~iwd~~~~~~-~~~~~~~~~~~~v~~~~~s~~ 281 (340)
T 1got_B 206 ASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA-FATGS--DDATCRLFDLRADQE-LMTYSHDNIICGITSVSFSKS 281 (340)
T ss_dssp SCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSE-EEEEE--TTSCEEEEETTTTEE-EEEECCTTCCSCEEEEEECTT
T ss_pred CcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCE-EEEEc--CCCcEEEEECCCCcE-EEEEccCCcccceEEEEECCC
Confidence 99999999998777777778899999999999997 55555 699999999998764 44443 23357999999999
Q ss_pred CCEEEEeecCCeEeeeecc
Q psy6213 284 PQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 284 ~~~l~s~~~dg~i~iw~~~ 302 (330)
+++|++|+.||.|++|+..
T Consensus 282 g~~l~~g~~d~~i~vwd~~ 300 (340)
T 1got_B 282 GRLLLAGYDDFNCNVWDAL 300 (340)
T ss_dssp SSEEEEEETTSEEEEEETT
T ss_pred CCEEEEECCCCeEEEEEcc
Confidence 9999999999999999854
No 52
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3e-41 Score=287.93 Aligned_cols=281 Identities=13% Similarity=0.160 Sum_probs=228.8
Q ss_pred ccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECC
Q psy6213 5 SPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLG 82 (330)
Q Consensus 5 ~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 82 (330)
..+....|+|+++++++| ||.|++||+.+++....+..|. ..|.+++|+| ++++|++|+.||.|++||+.
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~-------~~v~~~~~~~-~~~~l~s~s~d~~i~iwd~~ 169 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHV-------SEITKLKFFP-SGEALISSSQDMQLKIWSVK 169 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSS-------SCEEEEEECT-TSSEEEEEETTSEEEEEETT
T ss_pred CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeeccccc-------CccEEEEECC-CCCEEEEEeCCCeEEEEeCC
Confidence 344555789999995555 9999999999887665544433 3479999999 99999999999999999998
Q ss_pred CCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeec---CCCCeEE--------------
Q psy6213 83 QISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHS---NTESVRD-------------- 145 (330)
Q Consensus 83 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~---~~~~v~~-------------- 145 (330)
+ .+....+.+|...|.+++|+| ++++|++++.|+.|++||+++++.+..+.. +...+.+
T Consensus 170 ~---~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 245 (420)
T 3vl1_A 170 D---GSNPRTLIGHRATVTDIAIID-RGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEI 245 (420)
T ss_dssp T---CCCCEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGG
T ss_pred C---CcCceEEcCCCCcEEEEEEcC-CCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeec
Confidence 8 677778889999999999998 899999999999999999999998888764 3334444
Q ss_pred -------EEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCC-EEEEEecCCcEEEEeCCCCc
Q psy6213 146 -------VEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHA-WLATASRDKTIKVWDLSIKP 217 (330)
Q Consensus 146 -------~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~ 217 (330)
++|+|+++ ++++++.||.|++||+++..........|...|.+++|+|+++ +|++++.||.|++||+++++
T Consensus 246 ~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 246 STSKKNNLEFGTYGK-YVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPE 324 (420)
T ss_dssp CCCCCCTTCSSCTTE-EEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT
T ss_pred ccCcccceEEcCCCC-EEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 45577887 6899999999999999985554455556889999999999998 99999999999999999875
Q ss_pred c-ccceec-cccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCcc--------ceEeecCCCCeEEEEEecCCC--
Q psy6213 218 S-LEYSIN-TIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIP--------LASFTEHKDVVSGLAWRGDPQ-- 285 (330)
Q Consensus 218 ~-~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~--------~~~~~~~~~~v~~~~~~~~~~-- 285 (330)
. ...... +...+.++.+. ++++ +++++ .|+.|++|++..+..+ ...+..|...|.+++|+|+++
T Consensus 325 ~~~~~~~~~~~~~v~~~~~~-~~~~-l~s~~--~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~ 400 (420)
T 3vl1_A 325 CPVGEFLINEGTPINNVYFA-AGAL-FVSSG--FDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESN 400 (420)
T ss_dssp SCSEEEEESTTSCEEEEEEE-TTEE-EEEET--TTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSS
T ss_pred CchhhhhccCCCCceEEEeC-CCCE-EEEec--CCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCc
Confidence 5 333333 66778888654 6665 55565 6999999999874321 334567888999999999999
Q ss_pred -EEEEeecCCeEeeeecc
Q psy6213 286 -LFIASSRVSIIPRAKNI 302 (330)
Q Consensus 286 -~l~s~~~dg~i~iw~~~ 302 (330)
.|++++.+|.+.+|+..
T Consensus 401 g~l~a~g~~g~~~~~~~~ 418 (420)
T 3vl1_A 401 GEVLEVGKNNFCALYNLS 418 (420)
T ss_dssp CEEEEEETTTEEEEEESC
T ss_pred ceEEEEcCCceEEEEecc
Confidence 78888899999999754
No 53
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=5.2e-41 Score=309.22 Aligned_cols=282 Identities=18% Similarity=0.267 Sum_probs=242.9
Q ss_pred CCcccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|.+.|++++|+|+|++++++ ||.|+|||+.+++....+..+.. .|.+++|+| ++++|++++.||.|++|
T Consensus 11 ~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~-------~v~~~~~s~-~~~~l~~~~~dg~i~vw 82 (814)
T 3mkq_A 11 NRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTET-------PVRAGKFIA-RKNWIIVGSDDFRIRVF 82 (814)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-------CEEEEEEEG-GGTEEEEEETTSEEEEE
T ss_pred cCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCC-------cEEEEEEeC-CCCEEEEEeCCCeEEEE
Confidence 489999999999999995555 99999999999887776654433 369999999 99999999999999999
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecC-ceeeeeecCCCCeEEEEEcC-CCCcEEE
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQ-ESTKIFHSNTESVRDVEFNP-HSPYAFA 157 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~-~~~~~~~ 157 (330)
|+.+ ++....+..|...|.+++|+| ++.+|++++.||.|++||++++ .....+..|...|.+++|+| ++. .++
T Consensus 83 ~~~~---~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~-~l~ 157 (814)
T 3mkq_A 83 NYNT---GEKVVDFEAHPDYIRSIAVHP-TKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS-TFA 157 (814)
T ss_dssp ETTT---CCEEEEEECCSSCEEEEEECS-SSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEE-EEE
T ss_pred ECCC---CcEEEEEecCCCCEEEEEEeC-CCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCC-EEE
Confidence 9988 778888899999999999999 8999999999999999999987 66778888999999999999 565 799
Q ss_pred EEecCCcEEEEecCCCccceeeec-cCCCCeEEEEEcC--CCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEE
Q psy6213 158 SVSENGTIQQWDVRRPEKCFYQFT-AHSGPIFACDWHP--EHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKW 234 (330)
Q Consensus 158 ~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~i~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 234 (330)
+++.||.|++||+++.. ....+. .+...+.+++|+| ++.++++++.||.|++||+++++.......+...+.+++|
T Consensus 158 ~~~~dg~v~vwd~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~ 236 (814)
T 3mkq_A 158 SGCLDRTVKVWSLGQST-PNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVF 236 (814)
T ss_dssp EEETTSEEEEEETTCSS-CSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred EEeCCCeEEEEECCCCc-ceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 99999999999998744 444444 4448899999999 9999999999999999999988777767778899999999
Q ss_pred cCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCE-EEEeecCCeEeeeec
Q psy6213 235 RPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQL-FIASSRVSIIPRAKN 301 (330)
Q Consensus 235 ~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~dg~i~iw~~ 301 (330)
+|++++ +++++ .||.|++||+.++.. ...+..|...+.+++|+|++.. +++++.++.+.+|+.
T Consensus 237 ~~~~~~-l~~~~--~dg~v~vwd~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (814)
T 3mkq_A 237 HPTLPI-IISGS--EDGTLKIWNSSTYKV-EKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSL 300 (814)
T ss_dssp CSSSSE-EEEEE--TTSCEEEEETTTCSE-EEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEEC
T ss_pred cCCCCE-EEEEe--CCCeEEEEECCCCcE-EEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEc
Confidence 999997 55555 599999999998866 7888889999999999999873 244555666777764
No 54
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.8e-41 Score=278.88 Aligned_cols=278 Identities=13% Similarity=0.142 Sum_probs=230.2
Q ss_pred CCcccceEEEEeeCCCee-ecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCc-EEEEEcCCCcEEE
Q psy6213 2 AYLSPVHKHGLKADNGLA-QPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEEN-HIATGATNGAVVV 78 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~-~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~i 78 (330)
+|.+.|++++|+|+++++ +++ |+.|++|++.+++....... ...+...|.+++|+| +++ +|++|+.||.|++
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~----~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQ----SLRYKHPLLCCNFID-NTDLQIYVGTVQGEILK 83 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEE----EEECSSCEEEEEEEE-SSSEEEEEEETTSCEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcccccee----eeecCCceEEEEECC-CCCcEEEEEcCCCeEEE
Confidence 599999999999999994 444 99999999998762111111 112334579999999 899 9999999999999
Q ss_pred EEC-CCCCCCceeEEecc--cccceeEEEEEecCCCEEEEEecCCcEEEEEeec---------CceeeeeecCCCCeEEE
Q psy6213 79 WNL-GQISRSKQERVFND--HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC---------QESTKIFHSNTESVRDV 146 (330)
Q Consensus 79 w~~-~~~~~~~~~~~~~~--~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~---------~~~~~~~~~~~~~v~~~ 146 (330)
||+ .. . ....+.. |...|.+++|+| ++++++++.|+.|++||+++ ++++..+. +...+.++
T Consensus 84 wd~~~~---~-~~~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~ 156 (342)
T 1yfq_A 84 VDLIGS---P-SFQALTNNEANLGICRICKYG--DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTM 156 (342)
T ss_dssp ECSSSS---S-SEEECBSCCCCSCEEEEEEET--TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEE
T ss_pred EEeccC---C-ceEeccccCCCCceEEEEeCC--CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEE
Confidence 999 76 2 3366778 999999999997 88999999999999999998 77777777 88899999
Q ss_pred EEcCCCCcEEEEEecCCcEEEEecCC-Cccc-eeeeccCCCCeEEEEEcC-CCCEEEEEecCCcEEEEeCCCC------c
Q psy6213 147 EFNPHSPYAFASVSENGTIQQWDVRR-PEKC-FYQFTAHSGPIFACDWHP-EHAWLATASRDKTIKVWDLSIK------P 217 (330)
Q Consensus 147 ~~~~~~~~~~~~~~~dg~i~i~d~~~-~~~~-~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~------~ 217 (330)
+|+|++ +++++.++.|++||+++ .... ......|...+.+++|+| +++++++++.||.+++|+++.. +
T Consensus 157 ~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~ 233 (342)
T 1yfq_A 157 DTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSS 233 (342)
T ss_dssp EECSSE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCT
T ss_pred EecCCc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccc
Confidence 999886 88899999999999987 4432 334456888999999999 9999999999999999999876 3
Q ss_pred cccceecccc---------ceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecC-CCCeEEEEEecCCCEE
Q psy6213 218 SLEYSINTIA---------SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEH-KDVVSGLAWRGDPQLF 287 (330)
Q Consensus 218 ~~~~~~~~~~---------~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l 287 (330)
.......+.. .+.+++|+|++++++ +++ .||.|++||+.+++. +..+..| ..+|.+++ |++++|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~-~~~--~dg~i~vwd~~~~~~-~~~~~~~h~~~v~~~~--~~~~~l 307 (342)
T 1yfq_A 234 KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLY-TAG--SDGIISCWNLQTRKK-IKNFAKFNEDSVVKIA--CSDNIL 307 (342)
T ss_dssp TCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEE-EEE--TTSCEEEEETTTTEE-EEECCCCSSSEEEEEE--ECSSEE
T ss_pred cceeeecccccccccccceeEEEEEEcCCCCEEE-Eec--CCceEEEEcCccHhH-hhhhhcccCCCceEec--CCCCeE
Confidence 4444444433 899999999999754 554 599999999998876 7788888 99999999 999999
Q ss_pred EEeecCCe-Eeeee
Q psy6213 288 IASSRVSI-IPRAK 300 (330)
Q Consensus 288 ~s~~~dg~-i~iw~ 300 (330)
++++.||. .+.|+
T Consensus 308 ~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 308 CLATSDDTFKTNAA 321 (342)
T ss_dssp EEEEECTHHHHCSS
T ss_pred EEEecCCccccccc
Confidence 99999998 65554
No 55
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=276.72 Aligned_cols=252 Identities=24% Similarity=0.392 Sum_probs=204.5
Q ss_pred CCcccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|.+.|++++|+|+|++++++ |+.+++|+...+.......+. .+...|.+++|+| ++++|++|+.|+.|++|
T Consensus 59 ~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~-----~h~~~v~~v~~sp-~~~~l~s~s~D~~v~iw 132 (345)
T 3fm0_A 59 GHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLE-----GHENEVKSVAWAP-SGNLLATCSRDKSVWVW 132 (345)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEEC-----CCSSCEEEEEECT-TSSEEEEEETTSCEEEE
T ss_pred ccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEcc-----CCCCCceEEEEeC-CCCEEEEEECCCeEEEE
Confidence 589999999999999995555 999999999876533222221 2234479999999 99999999999999999
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCc--eeeeeecCCCCeEEEEEcCCCCcEEE
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQE--STKIFHSNTESVRDVEFNPHSPYAFA 157 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~ 157 (330)
|+...........+..|...|.+++|+| ++++|++++.|+.|++||.++++ ....+.+|...|.+++|+|+++ .|+
T Consensus 133 d~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~-~l~ 210 (345)
T 3fm0_A 133 EVDEEDEYECVSVLNSHTQDVKHVVWHP-SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQ-RLA 210 (345)
T ss_dssp EECTTSCEEEEEEECCCCSCEEEEEECS-SSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSS-EEE
T ss_pred ECCCCCCeEEEEEecCcCCCeEEEEECC-CCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCC-EEE
Confidence 9987544456777889999999999999 88999999999999999998875 3467888999999999999998 699
Q ss_pred EEecCCcEEEEecCCCcc--------------ceeeecc-CCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcccc--
Q psy6213 158 SVSENGTIQQWDVRRPEK--------------CFYQFTA-HSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE-- 220 (330)
Q Consensus 158 ~~~~dg~i~i~d~~~~~~--------------~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~-- 220 (330)
+++.|++|++||...+.. ++..+.+ |...|.+++|+|++..|++++.|+.|++|+........
T Consensus 211 s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~ 290 (345)
T 3fm0_A 211 SCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQP 290 (345)
T ss_dssp EEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSC
T ss_pred EEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCccee
Confidence 999999999999753221 1223333 88899999999999999999999999999987653211
Q ss_pred -------ceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCc
Q psy6213 221 -------YSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYI 263 (330)
Q Consensus 221 -------~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~ 263 (330)
....|...|.+++|+|+++.++++++ .||.|++|++.+++.
T Consensus 291 ~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s--~Dg~v~~W~~~~~~~ 338 (345)
T 3fm0_A 291 TFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCS--DDGEVAFWKYQRPEG 338 (345)
T ss_dssp CEEEEEEETTSSSSCEEEEEECSSSTTEEEEEE--TTSCEEEEEECC---
T ss_pred eEEEEeeecccccCcEeEeEEeCCCceEEEEcC--CCCcEEEEEecCCCC
Confidence 11357789999999999875688887 799999999988765
No 56
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.4e-41 Score=278.98 Aligned_cols=246 Identities=19% Similarity=0.222 Sum_probs=205.2
Q ss_pred ccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEec-CCCEEEEEecCCcEEEEEeec
Q psy6213 51 NFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYV-ESNWLISGSQDGTMRLFDIRC 129 (330)
Q Consensus 51 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~~~~l~~~~~d~~i~i~d~~~ 129 (330)
...|.+++|+| ++++|++|+.|+.|++||+.+. .......+.+|...|.+++|+|. ++++|++|+.|++|++||+++
T Consensus 13 ~~~V~~v~~s~-~g~~lasgs~D~~v~lwd~~~~-~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~ 90 (316)
T 3bg1_A 13 EDMIHDAQMDY-YGTRLATCSSDRSVKIFDVRNG-GQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN 90 (316)
T ss_dssp -CCEEEEEECG-GGCEEEEEETTTEEEEEEEETT-EEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS
T ss_pred cCeEEEeeEcC-CCCEEEEEeCCCeEEEEEecCC-CcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC
Confidence 34579999999 9999999999999999999762 12346678899999999999852 478999999999999999988
Q ss_pred Cc--eeeeeecCCCCeEEEEEcCC--CCcEEEEEecCCcEEEEecCCCcc--ceeeeccCCCCeEEEEEcCC--------
Q psy6213 130 QE--STKIFHSNTESVRDVEFNPH--SPYAFASVSENGTIQQWDVRRPEK--CFYQFTAHSGPIFACDWHPE-------- 195 (330)
Q Consensus 130 ~~--~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~i~~~~~~~~-------- 195 (330)
++ ....+.+|...|.+++|+|+ +. +|++++.|+.|++||++.... ....+..|...+.+++|+|+
T Consensus 91 ~~~~~~~~~~~h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~ 169 (316)
T 3bg1_A 91 GTWEKSHEHAGHDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLID 169 (316)
T ss_dssp SCCCEEEEECCCSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC-----
T ss_pred CcceEEEEccCCCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccc
Confidence 74 56667789999999999998 55 699999999999999987432 24566789999999999997
Q ss_pred ---------CCEEEEEecCCcEEEEeCCCCc---cccceeccccceEEEEEcCCC----CeEEEEeecccCCeEEEEEcc
Q psy6213 196 ---------HAWLATASRDKTIKVWDLSIKP---SLEYSINTIASVSRIKWRPQR----KFHLASCSLVVDSSVNVWDIR 259 (330)
Q Consensus 196 ---------~~~l~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~v~~~~~~~~~----~~l~~~~~~~~~~~i~i~d~~ 259 (330)
+++|++++.|+.|++||++... .......|...|.+++|+|++ . ++++++ .|+.|++|+++
T Consensus 170 ~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~-~las~s--~D~~v~iw~~~ 246 (316)
T 3bg1_A 170 HPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTS-TIASCS--QDGRVFIWTCD 246 (316)
T ss_dssp -CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCC-EEEEEE--TTCEEEEEECS
T ss_pred cccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCc-eEEEEc--CCCeEEEEEcc
Confidence 4689999999999999997542 334455688899999999986 5 477777 79999999998
Q ss_pred CC---CccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 260 RP---YIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 260 ~~---~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
.. ......+..|...|.+++|+|++++|++++.||.|++|+..
T Consensus 247 ~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 247 DASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp STTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred CccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 63 22234567789999999999999999999999999999854
No 57
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.5e-40 Score=269.16 Aligned_cols=249 Identities=18% Similarity=0.295 Sum_probs=200.4
Q ss_pred CCcccceEEEEeeCCCeeecC--CCeEEEEEcCCc--ceeeeeceeeccccccccceeeeeeccc-CCcEEEEEcCCCcE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDT--EFVETHNLRVGKNINLNFSCNDVAWSCI-EENHIATGATNGAV 76 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i 76 (330)
.|.+.|++++|+|+|+++++| |+.|+|||++.+ +....+..| ...|.+++|+|. ++++|++|+.||+|
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH-------~~~V~~v~~s~~~~g~~l~s~s~D~~v 79 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGH-------EGPVWRVDWAHPKFGTILASCSYDGKV 79 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCC-------SSCEEEEEECCGGGCSEEEEEETTTEE
T ss_pred CCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccc-------cCCeEEEEecCCCcCCEEEEEcCCCEE
Confidence 699999999999999995555 999999999753 334444333 334799999862 48899999999999
Q ss_pred EEEECCCCCCCceeEEecccccceeEEEEEecC-CCEEEEEecCCcEEEEEeecCce--eeeeecCCCCeEEEEEcCCC-
Q psy6213 77 VVWNLGQISRSKQERVFNDHKRTVNKVSFHYVE-SNWLISGSQDGTMRLFDIRCQES--TKIFHSNTESVRDVEFNPHS- 152 (330)
Q Consensus 77 ~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~- 152 (330)
++||+.+. .......+..|...|.+++|+|.. +.+|++++.|+.|++||++++.. ...+.+|...|.+++|+|++
T Consensus 80 ~iWd~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 158 (297)
T 2pm7_B 80 MIWKEENG-RWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATI 158 (297)
T ss_dssp EEEEBSSS-CBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC-
T ss_pred EEEEcCCC-ceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcc
Confidence 99999862 124556677899999999999832 78999999999999999987632 45677899999999999973
Q ss_pred -----------CcEEEEEecCCcEEEEecCCCcc---ceeeeccCCCCeEEEEEcCCC---CEEEEEecCCcEEEEeCCC
Q psy6213 153 -----------PYAFASVSENGTIQQWDVRRPEK---CFYQFTAHSGPIFACDWHPEH---AWLATASRDKTIKVWDLSI 215 (330)
Q Consensus 153 -----------~~~~~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~dg~i~i~d~~~ 215 (330)
..+|++|+.|+.|++||+++... ....+.+|...|.+++|+|++ ++|++++.|++|++||++.
T Consensus 159 ~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 159 EEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp -----------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 23799999999999999987432 456788999999999999984 8999999999999999987
Q ss_pred Ccc-----ccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCC
Q psy6213 216 KPS-----LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRP 261 (330)
Q Consensus 216 ~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~ 261 (330)
... ......+...+.+++|+|++++ +++++ .|+.|++|+....
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-las~~--~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNV-LALSG--GDNKVTLWKENLE 286 (297)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECSSSCC-EEEEE--TTSCEEEEEECTT
T ss_pred CCCccceeeeecccCCCcEEEEEECCCCCE-EEEEc--CCCcEEEEEECCC
Confidence 431 1111345788999999999997 55555 5999999998643
No 58
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=8e-40 Score=268.85 Aligned_cols=244 Identities=19% Similarity=0.313 Sum_probs=211.1
Q ss_pred ccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCC--CceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEE
Q psy6213 49 NLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISR--SKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126 (330)
Q Consensus 49 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d 126 (330)
.+...|.+++|+|.++++|++|+.|+.|++|++..... ..+...+.+|...|.+++|+| ++++|++|+.|++|++||
T Consensus 15 gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-dg~~l~s~s~D~~v~~wd 93 (319)
T 3frx_A 15 GHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTA-DGAYALSASWDKTLRLWD 93 (319)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEE
T ss_pred cccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECC-CCCEEEEEeCCCEEEEEE
Confidence 34455799999994558999999999999999864221 245677889999999999998 899999999999999999
Q ss_pred eecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCC------CCEEE
Q psy6213 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE------HAWLA 200 (330)
Q Consensus 127 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~------~~~l~ 200 (330)
+++++.+..+.+|...|.+++|+|++. ++++++.|+.|++||++. ..+..+.+|...+.++.|+|. +..++
T Consensus 94 ~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~s~D~~i~vwd~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~ 170 (319)
T 3frx_A 94 VATGETYQRFVGHKSDVMSVDIDKKAS-MIISGSRDKTIKVWTIKG--QCLATLLGHNDWVSQVRVVPNEKADDDSVTII 170 (319)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTTSC-EEEEEETTSCEEEEETTS--CEEEEECCCSSCEEEEEECCC------CCEEE
T ss_pred CCCCCeeEEEccCCCcEEEEEEcCCCC-EEEEEeCCCeEEEEECCC--CeEEEEeccCCcEEEEEEccCCCCCCCccEEE
Confidence 999999999999999999999999998 699999999999999974 567788899999999999985 44899
Q ss_pred EEecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEE
Q psy6213 201 TASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAW 280 (330)
Q Consensus 201 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 280 (330)
+++.|+.|++||+++.+.......|...|.+++|+|++++ +++++ .|+.|++||+.+++. +..+.. ...|.+++|
T Consensus 171 s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~-l~s~~--~dg~i~iwd~~~~~~-~~~~~~-~~~v~~~~~ 245 (319)
T 3frx_A 171 SAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTL-IASAG--KDGEIMLWNLAAKKA-MYTLSA-QDEVFSLAF 245 (319)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSE-EEEEE--TTCEEEEEETTTTEE-EEEEEC-CSCEEEEEE
T ss_pred EEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCE-EEEEe--CCCeEEEEECCCCcE-EEEecC-CCcEEEEEE
Confidence 9999999999999988766677788999999999999997 55555 699999999998865 666654 468999999
Q ss_pred ecCCCEEEEeecCCeEeeeecc
Q psy6213 281 RGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 281 ~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
+|++.+|++++.+ .+++|+..
T Consensus 246 sp~~~~la~~~~~-~i~v~~~~ 266 (319)
T 3frx_A 246 SPNRYWLAAATAT-GIKVFSLD 266 (319)
T ss_dssp CSSSSEEEEEETT-EEEEEEET
T ss_pred cCCCCEEEEEcCC-CcEEEEeC
Confidence 9999999988755 48999754
No 59
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=8.8e-40 Score=268.02 Aligned_cols=242 Identities=23% Similarity=0.422 Sum_probs=211.8
Q ss_pred cccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeec
Q psy6213 50 LNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC 129 (330)
Q Consensus 50 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (330)
+...|.+++|+| ++++|++|+.||.|++|+..+ .+....+.+|...|.+++|+| ++++|++++.|+.|++||+++
T Consensus 22 h~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~---~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~d~~i~vwd~~~ 96 (312)
T 4ery_A 22 HTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYD---GKFEKTISGHKLGISDVAWSS-DSNLLVSASDDKTLKIWDVSS 96 (312)
T ss_dssp CSSCEEEEEECT-TSSEEEEEETTSCEEEEETTT---CCEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTT
T ss_pred cCCcEEEEEECC-CCCEEEEeeCCCeEEEEeCCC---cccchhhccCCCceEEEEEcC-CCCEEEEECCCCEEEEEECCC
Confidence 344579999999 999999999999999999987 677788899999999999998 899999999999999999999
Q ss_pred CceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEE
Q psy6213 130 QESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIK 209 (330)
Q Consensus 130 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 209 (330)
++.+..+..|...|.+++|+|+++ ++++++.||.|++||+++ .+....+..|..+|.+++|+|++++|++++.||.|+
T Consensus 97 ~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 174 (312)
T 4ery_A 97 GKCLKTLKGHSNYVFCCNFNPQSN-LIVSGSFDESVRIWDVKT-GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCR 174 (312)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CcEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCC-CEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEE
Confidence 999999999999999999999998 699999999999999998 567788889999999999999999999999999999
Q ss_pred EEeCCCCcccccee-ccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEE--EEEe-cCCC
Q psy6213 210 VWDLSIKPSLEYSI-NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSG--LAWR-GDPQ 285 (330)
Q Consensus 210 i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~--~~~~-~~~~ 285 (330)
+||+++++...... .+..++..++|+|+++++++++ .|+.|++||+++++. +..+.+|...... ..++ +++.
T Consensus 175 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 250 (312)
T 4ery_A 175 IWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAAT---LDNTLKLWDYSKGKC-LKTYTGHKNEKYCIFANFSVTGGK 250 (312)
T ss_dssp EEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEE---TTTEEEEEETTTTEE-EEEECSSCCSSSCCCEEEECSSSC
T ss_pred EEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEc---CCCeEEEEECCCCcE-EEEEEecCCceEEEEEEEEeCCCc
Confidence 99999886544433 3567899999999999855554 599999999998865 7777777654332 2343 6889
Q ss_pred EEEEeecCCeEeeeecc
Q psy6213 286 LFIASSRVSIIPRAKNI 302 (330)
Q Consensus 286 ~l~s~~~dg~i~iw~~~ 302 (330)
+|++++.||.|++|+..
T Consensus 251 ~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 251 WIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp EEEECCTTSCEEEEETT
T ss_pred EEEEECCCCEEEEEECC
Confidence 99999999999999854
No 60
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-39 Score=279.96 Aligned_cols=290 Identities=12% Similarity=0.098 Sum_probs=230.1
Q ss_pred CCCcccceEEEEeeCCCeeecC-CCeEEEEEcCCcc---eeeeeceeec-------------------------------
Q psy6213 1 MAYLSPVHKHGLKADNGLAQPS-RNVFKIFLIKDTE---FVETHNLRVG------------------------------- 45 (330)
Q Consensus 1 ~~H~~~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~---~~~~~~~~~~------------------------------- 45 (330)
|.+..++.+++|+|+|++++++ ++.|++||+.+++ ....+..+..
T Consensus 1 ~~~~~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (450)
T 2vdu_B 1 MSVIHPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNK 80 (450)
T ss_dssp -CEECCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC--------------------------------
T ss_pred CCccccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCc
Confidence 6777899999999999997777 9999999999988 5444432211
Q ss_pred ----------------cccccccceeeeeecccCCcEE-EEEcCCCcEEEEECC--CCCCCceeEEec--ccccceeEEE
Q psy6213 46 ----------------KNINLNFSCNDVAWSCIEENHI-ATGATNGAVVVWNLG--QISRSKQERVFN--DHKRTVNKVS 104 (330)
Q Consensus 46 ----------------~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~i~iw~~~--~~~~~~~~~~~~--~~~~~i~~i~ 104 (330)
....+...|.+++|+| ++++| ++++.||.|++||+. + ......+. .|...|.+++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~---~~~~~~~~~~~~~~~v~~~~ 156 (450)
T 2vdu_B 81 GDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTS---KNVLKLRKRFCFSKRPNAIS 156 (450)
T ss_dssp -------------------CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSS---SSCEEEEEEEECSSCEEEEE
T ss_pred CccccccCccccCCCCCCCccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCC---CceeeeeecccCCCCceEEE
Confidence 0001222589999999 88885 899999999999998 5 45555554 5678999999
Q ss_pred EEecCCCEEEEEecCCcEEEEEeecCceee----eeecCCCCeEEEEEcCC---CCcEEEEEecCCcEEEEecCCCccce
Q psy6213 105 FHYVESNWLISGSQDGTMRLFDIRCQESTK----IFHSNTESVRDVEFNPH---SPYAFASVSENGTIQQWDVRRPEKCF 177 (330)
Q Consensus 105 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~----~~~~~~~~v~~~~~~~~---~~~~~~~~~~dg~i~i~d~~~~~~~~ 177 (330)
|+| ++.+|++|+.+|.+++|++.+++... .+.+|...|.+++|+|+ ++ +|++++.|+.|++||+++ ...+
T Consensus 157 ~sp-~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~-~~~~ 233 (450)
T 2vdu_B 157 IAE-DDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQ-CFIV 233 (450)
T ss_dssp ECT-TSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESC-TTCE
T ss_pred EcC-CCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCC-Ccee
Confidence 999 89999999999999999998877554 77789999999999999 76 699999999999999997 4445
Q ss_pred ee-eccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcccccee-------------------------ccccceEE
Q psy6213 178 YQ-FTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI-------------------------NTIASVSR 231 (330)
Q Consensus 178 ~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------------------------~~~~~v~~ 231 (330)
.. +.+|...|.+++|+ ++++|++++.|+.|++||+++++...... .....+..
T Consensus 234 ~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 312 (450)
T 2vdu_B 234 DKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSK 312 (450)
T ss_dssp EEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEE
T ss_pred eeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEE
Confidence 44 66899999999999 99999999999999999999886433322 22356899
Q ss_pred EEEcCCCCeEEEEeecccCCeEEEEEc--cCCC--ccceEeecCCCCeEEEEEecCCCEEEEeec------CCeEeeeec
Q psy6213 232 IKWRPQRKFHLASCSLVVDSSVNVWDI--RRPY--IPLASFTEHKDVVSGLAWRGDPQLFIASSR------VSIIPRAKN 301 (330)
Q Consensus 232 ~~~~~~~~~l~~~~~~~~~~~i~i~d~--~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~------dg~i~iw~~ 301 (330)
++|+|+++++++++. .++.|++|++ .... ..+..+..| ..|.+++|+|++.++++++. +..|.+|..
T Consensus 313 i~~~~~~~~l~~~~~--~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~ 389 (450)
T 2vdu_B 313 IIKSKNLPFVAFFVE--ATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEY 389 (450)
T ss_dssp EEECSSSSEEEEEET--TCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEE
T ss_pred EEEeCCCCEEEEEEC--CCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEE
Confidence 999999999888874 4999999999 4431 335667777 88999999996544444443 455788864
No 61
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=8.7e-41 Score=281.21 Aligned_cols=262 Identities=17% Similarity=0.292 Sum_probs=218.0
Q ss_pred CeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEE
Q psy6213 24 NVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKV 103 (330)
Q Consensus 24 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i 103 (330)
..+..|+.........+..|. ..|++++|+| ++++|++|+.||+|++||..+ .+....+..|...|.++
T Consensus 46 ~~~~~~~~~~~~~~~~l~gH~-------~~V~~~~~sp-~~~~l~s~s~D~~v~iWd~~~---~~~~~~~~~h~~~v~~~ 114 (380)
T 3iz6_a 46 RTAVSFNPTDLVCCRTLQGHS-------GKVYSLDWTP-EKNWIVSASQDGRLIVWNALT---SQKTHAIKLHCPWVMEC 114 (380)
T ss_dssp GGCCCCCCCCCEEEEEECCCS-------SCEEEEEECT-TSSCEEEEETTSEEEEEETTT---TEEEEEEECCCTTCCCC
T ss_pred ccccccccceeEEeecccccc-------cEEEEEEEcC-CCCEEEEEeCCCeEEEEECCC---CccceEEecCCCCEEEE
Confidence 334456655555555554443 3479999999 999999999999999999988 77888889999999999
Q ss_pred EEEecCCCEEEEEecCCcEEEEEeecCc-------eeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccc
Q psy6213 104 SFHYVESNWLISGSQDGTMRLFDIRCQE-------STKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176 (330)
Q Consensus 104 ~~~~~~~~~l~~~~~d~~i~i~d~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~ 176 (330)
+|+| ++++|++|+.|+.+++||+.+.. ....+.+|...+.++.|.|++...+++++.|++|++||+++ +..
T Consensus 115 ~~s~-~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~-~~~ 192 (380)
T 3iz6_a 115 AFAP-NGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTT-GQR 192 (380)
T ss_dssp EECT-TSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTT-CCE
T ss_pred EECC-CCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCC-CcE
Confidence 9999 89999999999999999987532 34567789999999999998766799999999999999998 444
Q ss_pred eeee-----ccCCCCeEEEEEcC-CCCEEEEEecCCcEEEEeCCCC-ccccceeccccceEEEEEcCCCCeEEEEeeccc
Q psy6213 177 FYQF-----TAHSGPIFACDWHP-EHAWLATASRDKTIKVWDLSIK-PSLEYSINTIASVSRIKWRPQRKFHLASCSLVV 249 (330)
Q Consensus 177 ~~~~-----~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~ 249 (330)
+..+ .+|...|.+++|+| ++++|++|+.|+.|++||++.. +.......|...|.+++|+|++++ +++++ .
T Consensus 193 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-l~s~s--~ 269 (380)
T 3iz6_a 193 ISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQR-FGTGS--D 269 (380)
T ss_dssp EEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSE-EEEEC--S
T ss_pred EEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCe-EEEEc--C
Confidence 5444 57889999999987 8899999999999999999854 445566678899999999999997 55565 6
Q ss_pred CCeEEEEEccCCCccceEeecCC-------CCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 250 DSSVNVWDIRRPYIPLASFTEHK-------DVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 250 ~~~i~i~d~~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
|+.|++||++++.. +..+..+. ..|.+++|+|+|++|++|+.||.|++|+..
T Consensus 270 D~~i~lwd~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 270 DGTCRLFDMRTGHQ-LQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp SSCEEEEETTTTEE-EEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETT
T ss_pred CCeEEEEECCCCcE-EEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECC
Confidence 99999999998865 55554432 248999999999999999999999999853
No 62
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-39 Score=268.28 Aligned_cols=241 Identities=20% Similarity=0.301 Sum_probs=195.3
Q ss_pred cceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEe-cc-cccceeEEEEEecCCCEEEEEecCCcEEEEEeec
Q psy6213 52 FSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVF-ND-HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC 129 (330)
Q Consensus 52 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~-~~-~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (330)
..|.+++|+| + +|++|+.|+.|++||+.... ......+ .. |...|.+++|+| ++++|++|+.|++|++||++.
T Consensus 15 ~~v~~~~~s~-~--~las~~~D~~i~lw~~~~~~-~~~~~~~~~~~h~~~v~~v~~sp-~~~~las~s~D~~v~iw~~~~ 89 (330)
T 2hes_X 15 EKIWSFDFSQ-G--ILATGSTDRKIKLVSVKYDD-FTLIDVLDETAHKKAIRSVAWRP-HTSLLAAGSFDSTVSIWAKEE 89 (330)
T ss_dssp SCEEEEEEET-T--EEEEEESSSCEEEEECSSSC-CEEEEEECTTCCCSCEEEEEECT-TSSEEEEEETTSCEEEEEC--
T ss_pred CceeeeccCC-C--EEEEEcCCCEEEEEEecCCC-eEEEEEEecCCccCCEEEEEECC-CCCEEEEEeCCCcEEEEEccc
Confidence 3479999998 4 99999999999999997621 2344445 34 999999999999 899999999999999999853
Q ss_pred -------CceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCc---cceeeeccCCCCeEEEEEcCCCCEE
Q psy6213 130 -------QESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPE---KCFYQFTAHSGPIFACDWHPEHAWL 199 (330)
Q Consensus 130 -------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~l 199 (330)
.+.+..+.+|...|.+++|+|+++ +|++++.|+.|++||++... +++..+.+|...|.+++|+|++.+|
T Consensus 90 ~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~-~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l 168 (330)
T 2hes_X 90 SADRTFEMDLLAIIEGHENEVKGVAWSNDGY-YLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALL 168 (330)
T ss_dssp -----CCCEEEEEEC----CEEEEEECTTSC-EEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEE
T ss_pred CcCccccceeEEEEcCCCCcEEEEEECCCCC-EEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEE
Confidence 345677888999999999999998 69999999999999995422 4566788999999999999999999
Q ss_pred EEEecCCcEEEEeCCCC--ccccceeccccceEEEEEcCC--CCeEEEEeecccCCeEEEEEccCCC-------ccceEe
Q psy6213 200 ATASRDKTIKVWDLSIK--PSLEYSINTIASVSRIKWRPQ--RKFHLASCSLVVDSSVNVWDIRRPY-------IPLASF 268 (330)
Q Consensus 200 ~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~~~~i~i~d~~~~~-------~~~~~~ 268 (330)
++++.|+.|++||.... +.......|...|.+++|+|+ +.. +++++ .|+.|++||++.+. .....+
T Consensus 169 ~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~-l~s~s--~D~~v~iw~~~~~~~~~~~~~~~~~~~ 245 (330)
T 2hes_X 169 ASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFR-LCSGS--DDSTVRVWKYMGDDEDDQQEWVCEAIL 245 (330)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCE-EEEEE--TTSCEEEEEEEEECTTSCEEEEEEEEC
T ss_pred EEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeE-EEEEe--CCCeEEEEEecCCCccccceeEEeeec
Confidence 99999999999998765 345556678899999999998 554 66666 69999999997542 113334
Q ss_pred ec-CCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 269 TE-HKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 269 ~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
.. |...|.+++|++++ +|++++.||.|++|+..
T Consensus 246 ~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~ 279 (330)
T 2hes_X 246 PDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEV 279 (330)
T ss_dssp CSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEE
T ss_pred ccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcC
Confidence 44 88999999999765 89999999999999854
No 63
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.4e-39 Score=269.76 Aligned_cols=243 Identities=17% Similarity=0.269 Sum_probs=212.3
Q ss_pred ccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEee
Q psy6213 49 NLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR 128 (330)
Q Consensus 49 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (330)
.+...|.+++|+| ++.+|++|+.||.|++||..+ .+....+..|...|.+++|+| ++.++++|+.|+.+++|++.
T Consensus 62 gH~~~V~~~~~s~-d~~~l~s~s~Dg~v~vWd~~~---~~~~~~~~~~~~~v~~~~~sp-~g~~lasg~~d~~i~v~~~~ 136 (354)
T 2pbi_B 62 GHGNKVLCMDWCK-DKRRIVSSSQDGKVIVWDSFT---TNKEHAVTMPCTWVMACAYAP-SGCAIACGGLDNKCSVYPLT 136 (354)
T ss_dssp CCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTT---CCEEEEEECSSSCCCEEEECT-TSSEEEEESTTSEEEEEECC
T ss_pred CCCCeEEEEEECC-CCCEEEEEeCCCeEEEEECCC---CCcceEEecCCCCEEEEEECC-CCCEEEEeeCCCCEEEEEEe
Confidence 3445589999999 999999999999999999887 667777788899999999999 89999999999999999986
Q ss_pred cC------ceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcC--CCCEEE
Q psy6213 129 CQ------ESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHP--EHAWLA 200 (330)
Q Consensus 129 ~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~l~ 200 (330)
.. .....+..|...|.+++|+|++. .+++++.|++|++||+++ ++.+..+.+|...|.+++|+| ++++|+
T Consensus 137 ~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~t~s~D~~v~lwd~~~-~~~~~~~~~h~~~v~~~~~~~~~~g~~l~ 214 (354)
T 2pbi_B 137 FDKNENMAAKKKSVAMHTNYLSACSFTNSDM-QILTASGDGTCALWDVES-GQLLQSFHGHGADVLCLDLAPSETGNTFV 214 (354)
T ss_dssp CCTTCCSGGGCEEEEECSSCEEEEEECSSSS-EEEEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEECCCSSCCEEE
T ss_pred ccccccccccceeeeccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEeCCC-CeEEEEEcCCCCCeEEEEEEeCCCCCEEE
Confidence 43 33556778999999999999998 599999999999999998 677888999999999999988 578999
Q ss_pred EEecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecC--CCCeEEE
Q psy6213 201 TASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEH--KDVVSGL 278 (330)
Q Consensus 201 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~--~~~v~~~ 278 (330)
+++.||.|++||+++++.......|...|.+++|+|++.+ +++++ .|+.|++||++.... +..+..+ ...+.++
T Consensus 215 sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~-l~s~s--~D~~v~lwd~~~~~~-~~~~~~~~~~~~~~~~ 290 (354)
T 2pbi_B 215 SGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDA-FASGS--DDATCRLYDLRADRE-VAIYSKESIIFGASSV 290 (354)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSE-EEEEE--TTSCEEEEETTTTEE-EEEECCTTCCSCEEEE
T ss_pred EEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCE-EEEEe--CCCeEEEEECCCCcE-EEEEcCCCcccceeEE
Confidence 9999999999999998777777778999999999999997 55666 699999999998754 4444433 3578999
Q ss_pred EEecCCCEEEEeecCCeEeeeecc
Q psy6213 279 AWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 279 ~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
+|+|++++|++++.|+.|++|+..
T Consensus 291 ~~s~~g~~l~~g~~d~~i~vwd~~ 314 (354)
T 2pbi_B 291 DFSLSGRLLFAGYNDYTINVWDVL 314 (354)
T ss_dssp EECTTSSEEEEEETTSCEEEEETT
T ss_pred EEeCCCCEEEEEECCCcEEEEECC
Confidence 999999999999999999999864
No 64
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=8e-40 Score=313.73 Aligned_cols=283 Identities=19% Similarity=0.304 Sum_probs=245.7
Q ss_pred CCcccceEEEEeeCCCeeec-C-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQP-S-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~-g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|.+.|++++|+|+|+++++ + ||.|++||+.+++....+..|. ..|.+++|+| ++++|++++.||.|++|
T Consensus 613 ~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~-------~~v~~~~~s~-~~~~l~s~~~d~~v~vw 684 (1249)
T 3sfz_A 613 PHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHE-------DEVLCCAFSS-DDSYIATCSADKKVKIW 684 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS-------SCEEEEEECT-TSSEEEEEETTSEEEEE
T ss_pred cccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCC-------CCEEEEEEec-CCCEEEEEeCCCeEEEE
Confidence 58999999999999999555 4 9999999999998777665443 3469999999 99999999999999999
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEec-CCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEE
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYV-ESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFAS 158 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 158 (330)
|+.+ ++....+.+|...|.+++|+|. +..++++|+.|+.|++||+++++....+.+|...|.+++|+|+++ .+++
T Consensus 685 d~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~-~l~s 760 (1249)
T 3sfz_A 685 DSAT---GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDE-LLAS 760 (1249)
T ss_dssp ETTT---CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTT-EEEE
T ss_pred ECCC---CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCC-EEEE
Confidence 9988 7888889999999999999984 345889999999999999999999999999999999999999998 6999
Q ss_pred EecCCcEEEEecCCCccceeeec-------------cCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcccccee-c
Q psy6213 159 VSENGTIQQWDVRRPEKCFYQFT-------------AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI-N 224 (330)
Q Consensus 159 ~~~dg~i~i~d~~~~~~~~~~~~-------------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~ 224 (330)
++.||.|++||+++. .....+. .+...+.+++|+|+|+.+++++ ++.+.+||+.++....... .
T Consensus 761 ~s~dg~v~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~-~~~v~~~d~~~~~~~~~~~~~ 838 (1249)
T 3sfz_A 761 CSADGTLRLWDVRSA-NERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA-KNKVLLFDIHTSGLLAEIHTG 838 (1249)
T ss_dssp EESSSEEEEEEGGGT-EEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-TTEEEEEETTTCCEEEEEECS
T ss_pred EECCCeEEEEeCCCC-cccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-CCcEEEEEecCCCceeEEcCC
Confidence 999999999999873 3333222 1234788999999999999887 6899999999886654443 6
Q ss_pred cccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 225 TIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 225 ~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
+...+.+++|+|+++.+++++ .++.|++||+.++.. ...+.+|...|.+++|+|+++.|++++.||.|++|+..
T Consensus 839 ~~~~v~~~~~sp~~~~l~~~~---~dg~v~vwd~~~~~~-~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 839 HHSTIQYCDFSPYDHLAVIAL---SQYCVELWNIDSRLK-VADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETK 912 (1249)
T ss_dssp SSSCCCEEEECSSTTEEEEEC---SSSCEEEEETTTTEE-EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHH
T ss_pred CCCceEEEEEcCCCCEEEEEe---CCCeEEEEEcCCCce-eeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEcc
Confidence 788999999999999755554 599999999998865 78889999999999999999999999999999999853
No 65
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.9e-40 Score=280.33 Aligned_cols=286 Identities=16% Similarity=0.213 Sum_probs=231.5
Q ss_pred ceEEEEeeCCCe-eec-C-CCeEEEEEcCCccee-eeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECC
Q psy6213 7 VHKHGLKADNGL-AQP-S-RNVFKIFLIKDTEFV-ETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLG 82 (330)
Q Consensus 7 v~~~~~s~~~~~-~~~-g-d~~i~iw~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 82 (330)
...++++|+... +++ + ||.|+||++...... ... .....+...|.+++|+|.++++|++|+.||.|++||+.
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~----~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~ 112 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNV----PLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIP 112 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTC----CCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCC----ceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEcc
Confidence 456888888776 443 4 999999999664321 111 11223345589999999778999999999999999998
Q ss_pred CCCCC----ceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeee--ecCCCCeEEEEEcCCCCcEE
Q psy6213 83 QISRS----KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIF--HSNTESVRDVEFNPHSPYAF 156 (330)
Q Consensus 83 ~~~~~----~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~ 156 (330)
+.... .....+.+|...|.+++|+|++.++|++++.|+.|++||+++++.+..+ ..|...|.+++|+|+++ .|
T Consensus 113 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l 191 (402)
T 2aq5_A 113 DGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGA-LI 191 (402)
T ss_dssp TTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSS-CE
T ss_pred CCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCC-EE
Confidence 73211 5667788999999999999943479999999999999999999999888 78999999999999998 59
Q ss_pred EEEecCCcEEEEecCCCccceeee-ccCCCC-eEEEEEcCCCCEEEEE---ecCCcEEEEeCCCCcccc--ceeccccce
Q psy6213 157 ASVSENGTIQQWDVRRPEKCFYQF-TAHSGP-IFACDWHPEHAWLATA---SRDKTIKVWDLSIKPSLE--YSINTIASV 229 (330)
Q Consensus 157 ~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~-i~~~~~~~~~~~l~~~---~~dg~i~i~d~~~~~~~~--~~~~~~~~v 229 (330)
++++.||.|++||+++ .+.+..+ ..|.+. +.++.|+|++++|+++ +.|+.|++||+++..... ....+...+
T Consensus 192 ~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v 270 (402)
T 2aq5_A 192 CTSCRDKRVRVIEPRK-GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGV 270 (402)
T ss_dssp EEEETTSEEEEEETTT-TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSC
T ss_pred EEEecCCcEEEEeCCC-CceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCce
Confidence 9999999999999998 5566666 677775 8999999999999999 799999999999875422 233467789
Q ss_pred EEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeec--CCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 230 SRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTE--HKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 230 ~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
.+++|+|++++++++++ .|+.|++||+.+++..+..+.. |...|.+++|+|++.++++ .++.+++|+..
T Consensus 271 ~~~~~s~~~~~l~~~g~--~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~ 341 (402)
T 2aq5_A 271 LLPFFDPDTNIVYLCGK--GDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLH 341 (402)
T ss_dssp EEEEEETTTTEEEEEET--TCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEE
T ss_pred eEEEEcCCCCEEEEEEc--CCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcC
Confidence 99999999998777776 6999999999988743444444 4589999999999988764 57799999854
No 66
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=7.5e-39 Score=276.67 Aligned_cols=275 Identities=20% Similarity=0.334 Sum_probs=230.1
Q ss_pred CCcccc-eEEEEeeCCCe-eecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEE
Q psy6213 2 AYLSPV-HKHGLKADNGL-AQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVV 78 (330)
Q Consensus 2 ~H~~~v-~~~~~s~~~~~-~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 78 (330)
.|.+.| .++.+ ++++ ++++ ||.|++||+.+++....+..|. ..|.+++|+| ++ .+++|+.||.|++
T Consensus 119 ~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~-------~~V~~l~~~~-~~-~l~s~s~dg~i~v 187 (464)
T 3v7d_B 119 GHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHD-------GGVWALKYAH-GG-ILVSGSTDRTVRV 187 (464)
T ss_dssp CCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCS-------SCEEEEEECS-TT-EEEEEETTSCEEE
T ss_pred CCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCC-------cCEEEEEEcC-CC-EEEEEeCCCCEEE
Confidence 477775 55555 5677 4445 9999999999998777665443 3469999998 55 9999999999999
Q ss_pred EECCCCCCCceeEEecccccceeEEEEEe-cCCCEEEEEecCCcEEEEEeecCce-----------------------ee
Q psy6213 79 WNLGQISRSKQERVFNDHKRTVNKVSFHY-VESNWLISGSQDGTMRLFDIRCQES-----------------------TK 134 (330)
Q Consensus 79 w~~~~~~~~~~~~~~~~~~~~i~~i~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~-----------------------~~ 134 (330)
||+.+ .+....+.+|...|.+++|++ .++.++++|+.|+.|++||+++++. ..
T Consensus 188 wd~~~---~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (464)
T 3v7d_B 188 WDIKK---GCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVG 264 (464)
T ss_dssp EETTT---TEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEE
T ss_pred EECCC---CcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEE
Confidence 99988 778888999999999999995 2668999999999999999987653 34
Q ss_pred eeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCC
Q psy6213 135 IFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLS 214 (330)
Q Consensus 135 ~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 214 (330)
.+.+|...+.++ +++++ .+++++.||.|++||+++ .+.+..+.+|...|.+++|+|+++++++++.||.|++||++
T Consensus 265 ~~~~~~~~v~~~--~~~~~-~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~ 340 (464)
T 3v7d_B 265 VLRGHMASVRTV--SGHGN-IVVSGSYDNTLIVWDVAQ-MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLE 340 (464)
T ss_dssp EECCCSSCEEEE--EEETT-EEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETT
T ss_pred EccCccceEEEE--cCCCC-EEEEEeCCCeEEEEECCC-CcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC
Confidence 566778888877 46666 699999999999999997 67788889999999999999999999999999999999999
Q ss_pred CCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCC
Q psy6213 215 IKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVS 294 (330)
Q Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 294 (330)
+++.......|...+.+++|++ .+ +++++ .||.|++||++++.. .... .|...+..++|+|++++|++++ ||
T Consensus 341 ~~~~~~~~~~h~~~v~~~~~~~--~~-l~s~s--~dg~v~vwd~~~~~~-~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg 412 (464)
T 3v7d_B 341 NGELMYTLQGHTALVGLLRLSD--KF-LVSAA--ADGSIRGWDANDYSR-KFSY-HHTNLSAITTFYVSDNILVSGS-EN 412 (464)
T ss_dssp TTEEEEEECCCSSCEEEEEECS--SE-EEEEE--TTSEEEEEETTTCCE-EEEE-ECTTCCCEEEEEECSSEEEEEE-TT
T ss_pred CCcEEEEEeCCCCcEEEEEEcC--CE-EEEEe--CCCcEEEEECCCCce-eeee-cCCCCccEEEEEeCCCEEEEec-CC
Confidence 9877777778899999999984 44 55555 699999999998764 2222 3667788899999999999988 99
Q ss_pred eEeeeecc
Q psy6213 295 IIPRAKNI 302 (330)
Q Consensus 295 ~i~iw~~~ 302 (330)
.|++|+..
T Consensus 413 ~i~iwd~~ 420 (464)
T 3v7d_B 413 QFNIYNLR 420 (464)
T ss_dssp EEEEEETT
T ss_pred eEEEEECC
Confidence 99999854
No 67
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=2.2e-39 Score=277.08 Aligned_cols=257 Identities=23% Similarity=0.353 Sum_probs=215.3
Q ss_pred cccccceeeeeecccCCcEEEEEcCCCcEEEEECCCC-------CCCceeEEecccccceeEEEEEecCCCEEEEEecCC
Q psy6213 48 INLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQI-------SRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDG 120 (330)
Q Consensus 48 ~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~-------~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~ 120 (330)
..+...|++++|+|+++.+|++++.+|.|++|++... ........+..|...+.+++|+|.+..+|++|+.||
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence 3445568999999944789999999999999999751 224566778899999999999994444999999999
Q ss_pred cEEEEEeecCce-------eeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCc--cceeeeccCCCCeEEEE
Q psy6213 121 TMRLFDIRCQES-------TKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPE--KCFYQFTAHSGPIFACD 191 (330)
Q Consensus 121 ~i~i~d~~~~~~-------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~i~~~~ 191 (330)
.|++||+.++.. ...+..|...|.+++|+|++..+|++++.||.|++||+++.. .....+..|...|++++
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~ 284 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLS 284 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEE
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEE
Confidence 999999987322 455667899999999999666689999999999999999753 56677788999999999
Q ss_pred EcCCCC-EEEEEecCCcEEEEeCCCCc-cccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCC-------
Q psy6213 192 WHPEHA-WLATASRDKTIKVWDLSIKP-SLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY------- 262 (330)
Q Consensus 192 ~~~~~~-~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~------- 262 (330)
|+|++. ++++++.||.|++||++... .......|...|.+++|+|++++++++++ .|+.|++||+....
T Consensus 285 ~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~ 362 (430)
T 2xyi_A 285 FNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLHVWDLSKIGEEQSTED 362 (430)
T ss_dssp ECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEE--TTSCCEEEEGGGTTCCCCHHH
T ss_pred eCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEe--CCCcEEEEeCCCCccccCccc
Confidence 999887 78999999999999999853 35555568899999999999987787777 79999999998722
Q ss_pred ------ccceEeecCCCCeEEEEEecCCC-EEEEeecCCeEeeeeccceee
Q psy6213 263 ------IPLASFTEHKDVVSGLAWRGDPQ-LFIASSRVSIIPRAKNIKIFI 306 (330)
Q Consensus 263 ------~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iw~~~~~~~ 306 (330)
..+....+|...|.+++|+|+++ +|++++.||.|++|+..+...
T Consensus 363 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~~ 413 (430)
T 2xyi_A 363 AEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVY 413 (430)
T ss_dssp HHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHHH
T ss_pred cccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccccc
Confidence 33667778999999999999999 999999999999998765443
No 68
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.5e-40 Score=269.98 Aligned_cols=248 Identities=20% Similarity=0.262 Sum_probs=197.4
Q ss_pred CCcccceEEEEeeCCCeeecC--CCeEEEEEcCCccee--eeeceeeccccccccceeeeeeccc-CCcEEEEEcCCCcE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFV--ETHNLRVGKNINLNFSCNDVAWSCI-EENHIATGATNGAV 76 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i 76 (330)
.|.++|++++|+|+|+++++| |+.|+|||+.+++.. ..+.. +...|.+++|+|. ++++|++|+.|++|
T Consensus 11 ~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~g-------H~~~V~~v~~~~~~~~~~l~s~s~D~~v 83 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRG-------HEGPVWQVAWAHPMYGNILASCSYDRKV 83 (316)
T ss_dssp ---CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEEC-------CSSCEEEEEECCGGGSSCEEEEETTSCE
T ss_pred cccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcC-------CCccEEEEEeCCCCCCCEEEEEECCCEE
Confidence 599999999999999995555 999999999876532 22322 2344799999862 48999999999999
Q ss_pred EEEECCCCCCCceeEEecccccceeEEEEEecC-CCEEEEEecCCcEEEEEeecCce---eeeeecCCCCeEEEEEcCCC
Q psy6213 77 VVWNLGQISRSKQERVFNDHKRTVNKVSFHYVE-SNWLISGSQDGTMRLFDIRCQES---TKIFHSNTESVRDVEFNPHS 152 (330)
Q Consensus 77 ~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~-~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~v~~~~~~~~~ 152 (330)
++||+++. .......+.+|...|.+++|+|++ +.+|++|+.|+.|++||++.+.. ...+..|...+.+++|+|+.
T Consensus 84 ~iWd~~~~-~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 162 (316)
T 3bg1_A 84 IIWREENG-TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAV 162 (316)
T ss_dssp EEECCSSS-CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCC
T ss_pred EEEECCCC-cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEcccc
Confidence 99999862 124556778899999999999932 78999999999999999987632 34556788899999999973
Q ss_pred ----------------CcEEEEEecCCcEEEEecCCCc--cceeeeccCCCCeEEEEEcCCC----CEEEEEecCCcEEE
Q psy6213 153 ----------------PYAFASVSENGTIQQWDVRRPE--KCFYQFTAHSGPIFACDWHPEH----AWLATASRDKTIKV 210 (330)
Q Consensus 153 ----------------~~~~~~~~~dg~i~i~d~~~~~--~~~~~~~~~~~~i~~~~~~~~~----~~l~~~~~dg~i~i 210 (330)
..+|++++.|+.|++||++... .+...+.+|...|.+++|+|++ ++|++++.|++|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~i 242 (316)
T 3bg1_A 163 VPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFI 242 (316)
T ss_dssp CC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEE
T ss_pred CCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEE
Confidence 1269999999999999997532 3566788999999999999986 89999999999999
Q ss_pred EeCCCCc----cccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccC
Q psy6213 211 WDLSIKP----SLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260 (330)
Q Consensus 211 ~d~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~ 260 (330)
||++... .......+...|.+++|+|++++ +++++ .|+.|++|+...
T Consensus 243 w~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~-las~~--~D~~v~lw~~~~ 293 (316)
T 3bg1_A 243 WTCDDASSNTWSPKLLHKFNDVVWHVSWSITANI-LAVSG--GDNKVTLWKESV 293 (316)
T ss_dssp EECSSTTCCCCBCCEEEECSSCEEEEEECTTTCC-EEEEE--SSSCEEEEEECT
T ss_pred EEccCccccchhhhhhhcCCCcEEEEEEcCCCCE-EEEEc--CCCeEEEEEECC
Confidence 9997631 12233456789999999999997 45555 599999999763
No 69
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.7e-39 Score=269.78 Aligned_cols=295 Identities=14% Similarity=0.144 Sum_probs=210.5
Q ss_pred CCcccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeeccc-CCcEEEEEcCCCcEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCI-EENHIATGATNGAVVV 78 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~i 78 (330)
.|.++|++++|+|++++++++ ||.|++||+.++....... .....+...|.+++|+|. ++++|++|+.||.|++
T Consensus 9 gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELS---DSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEE---EEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred ccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceec---ceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 699999999999999995554 9999999998764221111 011123345799999984 4899999999999999
Q ss_pred EECCCCCC------CceeEEecccccceeEEEEEecC--CCEEEEEecCCcEEEEEeecCceeeeee-------------
Q psy6213 79 WNLGQISR------SKQERVFNDHKRTVNKVSFHYVE--SNWLISGSQDGTMRLFDIRCQESTKIFH------------- 137 (330)
Q Consensus 79 w~~~~~~~------~~~~~~~~~~~~~i~~i~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~------------- 137 (330)
||+..... .+....+..|...|.+++|+| + +.++++++.||.|++||+++++.+..+.
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAP-AHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcC-CCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 99987321 155777889999999999998 6 8999999999999999999887654443
Q ss_pred cCCCCeEEEEEcCC---CCcEEEEEecCCcEEEEecCCCcc-ceeeeccCCCCeEEEEEcCCC----CEEEEEecCCcEE
Q psy6213 138 SNTESVRDVEFNPH---SPYAFASVSENGTIQQWDVRRPEK-CFYQFTAHSGPIFACDWHPEH----AWLATASRDKTIK 209 (330)
Q Consensus 138 ~~~~~v~~~~~~~~---~~~~~~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~~~~~----~~l~~~~~dg~i~ 209 (330)
.+...+.+++|+|+ +. .+++++.++.+.+|+...... ....+.+|...|.+++|+|++ ++|++++.||.|+
T Consensus 165 ~~~~~~~~~~~~p~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~ 243 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPE-KLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIR 243 (351)
T ss_dssp SCSCCCEEEEECCCSSSCC-EEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEE
T ss_pred CcccceeEEEeccCCCCCc-EEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEE
Confidence 46778999999997 65 799999999998887766322 366778899999999999998 8999999999999
Q ss_pred EEeCCCCccccceeccccceEEEEEcCCCCeEEEEee-cccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEE
Q psy6213 210 VWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCS-LVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFI 288 (330)
Q Consensus 210 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 288 (330)
+||++.....................+.......... ......+.+|+...... +..+.+|...|++++|+|++++|+
T Consensus 244 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~~~~s~~~~~l~ 322 (351)
T 3f3f_A 244 IFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVEL-LSEHDDHNGEVWSVSWNLTGTILS 322 (351)
T ss_dssp EEEEEECC---------------------------------------CCSEEEEE-EEEECTTSSCEEEEEECSSSCCEE
T ss_pred EEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccE-EEEEecccccEEEEEEcCCCCEEE
Confidence 9999877544443333334444444444332111111 00234445555444433 777889999999999999999999
Q ss_pred EeecCCeEeeeecc
Q psy6213 289 ASSRVSIIPRAKNI 302 (330)
Q Consensus 289 s~~~dg~i~iw~~~ 302 (330)
+++.||.|++|+..
T Consensus 323 s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 323 SAGDDGKVRLWKAT 336 (351)
T ss_dssp EEETTSCEEEEEEC
T ss_pred EecCCCcEEEEecC
Confidence 99999999999865
No 70
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=3.9e-39 Score=287.71 Aligned_cols=284 Identities=14% Similarity=0.183 Sum_probs=243.1
Q ss_pred CCcccceEEEEeeCCCeeecC-CCeEEEEEcCCc----ceeeeeceeeccccccccc-eeeeeeccc-CCcEEEEEcCCC
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS-RNVFKIFLIKDT----EFVETHNLRVGKNINLNFS-CNDVAWSCI-EENHIATGATNG 74 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~----~~~~~~~~~~~~~~~~~~~-v~~~~~~~~-~~~~l~~~~~dg 74 (330)
.|.+.|.+++|+|+|++++++ ++.|++|+++++ +....+..| ... |.+++|+|. ++++|++++.||
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h-------~~~~v~~~~~sp~~~~~~l~s~~~dg 88 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGH-------GSSVVTTVKFSPIKGSQYLCSGDESG 88 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTT-------TTSCEEEEEECSSTTCCEEEEEETTS
T ss_pred CccCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecC-------CCceEEEEEECcCCCCCEEEEecCCC
Confidence 588999999999999998778 999999999987 655555433 334 699999984 678999999999
Q ss_pred cEEEEECCCCC-----CCceeEEecccccceeEEEEEecCCCEEEEEecC----CcEEEEEeecCceeeeeecCCCCeEE
Q psy6213 75 AVVVWNLGQIS-----RSKQERVFNDHKRTVNKVSFHYVESNWLISGSQD----GTMRLFDIRCQESTKIFHSNTESVRD 145 (330)
Q Consensus 75 ~i~iw~~~~~~-----~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~v~~ 145 (330)
.|++||+.+.. .......+..|...|.+++|+| ++++|++++.+ +.|++|| .++.+..+..|...|.+
T Consensus 89 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~ 165 (615)
T 1pgu_A 89 KVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDF-EGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINA 165 (615)
T ss_dssp EEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECT-TSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEE
T ss_pred EEEEEeCCCCcccccccccccchhhcccccEEEEEEeC-CCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEE
Confidence 99999996410 1366677788999999999998 89999999987 6888888 57788888999999999
Q ss_pred EEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCC---CeEEEEEcCC-CCEEEEEecCCcEEEEeCCCCccccc
Q psy6213 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSG---PIFACDWHPE-HAWLATASRDKTIKVWDLSIKPSLEY 221 (330)
Q Consensus 146 ~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~ 221 (330)
++|+|++++++++++.|+.|++||+++ .+....+..|.. .|.+++|+|+ +++|++++.||.|++||+++++....
T Consensus 166 ~~~~~~~~~~l~~~~~d~~v~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 244 (615)
T 1pgu_A 166 CHLKQSRPMRSMTVGDDGSVVFYQGPP-FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKY 244 (615)
T ss_dssp EEECSSSSCEEEEEETTTEEEEEETTT-BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEE
T ss_pred EEECCCCCcEEEEEeCCCcEEEEeCCC-cceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEE
Confidence 999999987799999999999999987 677788888998 9999999999 99999999999999999998866555
Q ss_pred e-e---ccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecC----CCCeEEEEEecCCCEEEEeecC
Q psy6213 222 S-I---NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEH----KDVVSGLAWRGDPQLFIASSRV 293 (330)
Q Consensus 222 ~-~---~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~s~~~d 293 (330)
. . .+...+.+++|+ ++++++ +++ .|+.|++||+++++. +..+..+ ...+.++.|. +++++++++.|
T Consensus 245 ~~~~~~~~~~~v~~~~~~-~~~~l~-~~~--~d~~i~~wd~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~ 318 (615)
T 1pgu_A 245 IEDDQEPVQGGIFALSWL-DSQKFA-TVG--ADATIRVWDVTTSKC-VQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLD 318 (615)
T ss_dssp CCBTTBCCCSCEEEEEES-SSSEEE-EEE--TTSEEEEEETTTTEE-EEEEECCTTCGGGCEEEEEEE-ETTEEEEEETT
T ss_pred ecccccccCCceEEEEEc-CCCEEE-EEc--CCCcEEEEECCCCcE-EEEEcCCCCcccCceeEEEeC-CCCeEEEEECC
Confidence 5 4 788999999999 888744 444 599999999998765 6666665 3678888886 89999999999
Q ss_pred CeEeeeecc
Q psy6213 294 SIIPRAKNI 302 (330)
Q Consensus 294 g~i~iw~~~ 302 (330)
|.|++|+..
T Consensus 319 g~i~~~d~~ 327 (615)
T 1pgu_A 319 GTLNFYELG 327 (615)
T ss_dssp SCEEEEETT
T ss_pred CCEEEEECC
Confidence 999999865
No 71
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=3.8e-39 Score=276.17 Aligned_cols=272 Identities=20% Similarity=0.304 Sum_probs=229.8
Q ss_pred CCcccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|...|.++++ +++++++| ||.|++||+.+++....+..|.. .|.+++| ++++|++|+.||.|++|
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~-------~v~~l~~---~~~~l~sg~~dg~i~vw 198 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTG-------SVLCLQY---DERVIITGSSDSTVRVW 198 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSS-------CEEEEEC---CSSEEEEEETTSCEEEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCC-------cEEEEEE---CCCEEEEEcCCCeEEEE
Confidence 35677888877 78885554 99999999999887776655433 3688888 56899999999999999
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCcee---eeeecCCCCeEEEEEcCCCCcEE
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQEST---KIFHSNTESVRDVEFNPHSPYAF 156 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~ 156 (330)
|+.+ .+....+..|...|.+++|+ ++++++|+.||.|++||+++++.. ..+.+|...|.+++| +++ .+
T Consensus 199 d~~~---~~~~~~~~~h~~~v~~l~~~---~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~-~l 269 (435)
T 1p22_A 199 DVNT---GEMLNTLIHHCEAVLHLRFN---NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDK-YI 269 (435)
T ss_dssp ESSS---CCEEEEECCCCSCEEEEECC---TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETT-EE
T ss_pred ECCC---CcEEEEEcCCCCcEEEEEEc---CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCC-EE
Confidence 9988 67888899999999999986 459999999999999999987765 667789999999999 455 69
Q ss_pred EEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcC
Q psy6213 157 ASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRP 236 (330)
Q Consensus 157 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~ 236 (330)
++++.||.|++||+++ .+.+..+..|...|.++.++ ++++++|+.||.|++||+++++.......|...+.+++|
T Consensus 270 ~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~-- 344 (435)
T 1p22_A 270 VSASGDRTIKVWNTST-CEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF-- 344 (435)
T ss_dssp EEEETTSEEEEEETTT-CCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--
T ss_pred EEEeCCCeEEEEECCc-CcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--
Confidence 9999999999999998 67788889999999999995 689999999999999999998777777778899999999
Q ss_pred CCCeEEEEeecccCCeEEEEEccCCCc--------cceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeeccce
Q psy6213 237 QRKFHLASCSLVVDSSVNVWDIRRPYI--------PLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIKI 304 (330)
Q Consensus 237 ~~~~l~~~~~~~~~~~i~i~d~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~~ 304 (330)
++.+ +++++ .||.|++||++++.. .+..+.+|.+.|.+++| ++.+|++++.||.|++|+....
T Consensus 345 ~~~~-l~sg~--~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 345 DNKR-IVSGA--YDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp CSSE-EEEEE--TTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC----
T ss_pred cCCE-EEEEe--CCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECCCC
Confidence 5665 55555 699999999976541 36778899999999999 7889999999999999986543
No 72
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.2e-38 Score=284.63 Aligned_cols=284 Identities=14% Similarity=0.246 Sum_probs=223.9
Q ss_pred CCcccceEEEEeeCCC-e-eecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccC-CcEEEEEcCCCcEE
Q psy6213 2 AYLSPVHKHGLKADNG-L-AQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIE-ENHIATGATNGAVV 77 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~-~-~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~ 77 (330)
.|.+.|++++|+|+++ . ++++ |+.|++||+.+++....+..+... ...|.+++|+| + +++|++++.||.|+
T Consensus 158 ~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~----~~~v~~~~~~~-~~~~~l~~~~~dg~i~ 232 (615)
T 1pgu_A 158 GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQ----GSFVRDVEFSP-DSGEFVITVGSDRKIS 232 (615)
T ss_dssp SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCT----TCCEEEEEECS-TTCCEEEEEETTCCEE
T ss_pred cCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCC----CceEEEEEECC-CCCCEEEEEeCCCeEE
Confidence 5889999999999998 4 4444 999999999998877666544330 01469999999 7 99999999999999
Q ss_pred EEECCCCCCCceeEEe-c---ccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeee----------------
Q psy6213 78 VWNLGQISRSKQERVF-N---DHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFH---------------- 137 (330)
Q Consensus 78 iw~~~~~~~~~~~~~~-~---~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---------------- 137 (330)
+||+.+ .+....+ . .|...|.+++|+ ++.+|++++.|+.|++||+++++.+..+.
T Consensus 233 vwd~~~---~~~~~~~~~~~~~~~~~v~~~~~~--~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (615)
T 1pgu_A 233 CFDGKS---GEFLKYIEDDQEPVQGGIFALSWL--DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT 307 (615)
T ss_dssp EEETTT---CCEEEECCBTTBCCCSCEEEEEES--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE
T ss_pred EEECCC---CCEeEEecccccccCCceEEEEEc--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeC
Confidence 999987 6777777 5 899999999998 78999999999999999987665433332
Q ss_pred -----------------------------cCCCCeEE---------------------------------EEEcCCCCcE
Q psy6213 138 -----------------------------SNTESVRD---------------------------------VEFNPHSPYA 155 (330)
Q Consensus 138 -----------------------------~~~~~v~~---------------------------------~~~~~~~~~~ 155 (330)
.|...|.+ ++| ++++ .
T Consensus 308 ~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~-~~~~-~ 385 (615)
T 1pgu_A 308 GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDN-SKAQ-E 385 (615)
T ss_dssp ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEEC-CSTT-C
T ss_pred CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEE-CCCc-E
Confidence 23333333 333 1122 2
Q ss_pred EEEEec--------------------------------------------------------------------------
Q psy6213 156 FASVSE-------------------------------------------------------------------------- 161 (330)
Q Consensus 156 ~~~~~~-------------------------------------------------------------------------- 161 (330)
+++++.
T Consensus 386 l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 465 (615)
T 1pgu_A 386 YSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEE 465 (615)
T ss_dssp CEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETT
T ss_pred EEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecC
Confidence 334443
Q ss_pred CCcEEEEecCCCccce-eeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceec-cccceEEEEEcC---
Q psy6213 162 NGTIQQWDVRRPEKCF-YQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSIN-TIASVSRIKWRP--- 236 (330)
Q Consensus 162 dg~i~i~d~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~--- 236 (330)
|+.|++||+.+. ... ..+..|...|.+++|+|++++|++++.||.|++||+.+++....... |...|++++|+|
T Consensus 466 d~~i~~~~~~~~-~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~ 544 (615)
T 1pgu_A 466 GNTIQVFKLSDL-EVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEK 544 (615)
T ss_dssp TSCEEEEETTEE-EEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC-
T ss_pred CCeEEEEECCCc-cccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccc
Confidence 455555555431 221 55667899999999999999999999999999999998876666555 889999999999
Q ss_pred -------CCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 237 -------QRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 237 -------~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
++++ +++++ .|+.|++||+.++..++..+.+|...|.+++|+|+++ |++++.||.|++|+..
T Consensus 545 ~~~~~~~~~~~-l~~~~--~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~~v~iw~~~ 613 (615)
T 1pgu_A 545 GANEEEIEEDL-VATGS--LDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADACIKRWNVV 613 (615)
T ss_dssp -----CCSCCE-EEEEE--TTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTSCEEEEEEC
T ss_pred cccccccCCCE-EEEEc--CCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCceEEEEeee
Confidence 9997 55555 6999999999988555888899999999999999999 9999999999999753
No 73
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-38 Score=269.38 Aligned_cols=241 Identities=20% Similarity=0.344 Sum_probs=202.3
Q ss_pred cccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccc------------------cceeEEEEEecCCC
Q psy6213 50 LNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHK------------------RTVNKVSFHYVESN 111 (330)
Q Consensus 50 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~------------------~~i~~i~~~~~~~~ 111 (330)
+...|.+++|+| ++++|++|+ ++.+++|++.+ ++....+..+. ..|.+++|+| +++
T Consensus 63 h~~~V~~v~fsp-dg~~la~g~-~~~v~i~~~~~---g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~-dg~ 136 (393)
T 1erj_A 63 HTSVVCCVKFSN-DGEYLATGC-NKTTQVYRVSD---GSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP-DGK 136 (393)
T ss_dssp CSSCCCEEEECT-TSSEEEEEC-BSCEEEEETTT---CCEEEEECC-----------------CCCCBEEEEEECT-TSS
T ss_pred CCCEEEEEEECC-CCCEEEEEc-CCcEEEEEecC---CCEEEEecCccccccccccccccccCCCceeEEEEEECC-CCC
Confidence 445579999999 999999987 67899999987 55555554433 2489999998 899
Q ss_pred EEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEE
Q psy6213 112 WLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACD 191 (330)
Q Consensus 112 ~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~ 191 (330)
+|++|+.|+.|++||+.+++.+..+.+|...|.+++|+|+++ .+++++.|++|++||+++ ++....+. +...+.+++
T Consensus 137 ~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~~v~iwd~~~-~~~~~~~~-~~~~v~~~~ 213 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGD-KLVSGSGDRTVRIWDLRT-GQCSLTLS-IEDGVTTVA 213 (393)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTT-TEEEEEEE-CSSCEEEEE
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCC-EEEEecCCCcEEEEECCC-CeeEEEEE-cCCCcEEEE
Confidence 999999999999999999999999999999999999999998 589999999999999997 45555554 567899999
Q ss_pred EcC-CCCEEEEEecCCcEEEEeCCCCccccce-------eccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCC-
Q psy6213 192 WHP-EHAWLATASRDKTIKVWDLSIKPSLEYS-------INTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY- 262 (330)
Q Consensus 192 ~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~- 262 (330)
|+| ++++|++++.||.|++||++++...... ..|...|.+++|+|++++ +++++ .|+.|++||+++..
T Consensus 214 ~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~-l~s~s--~d~~v~~wd~~~~~~ 290 (393)
T 1erj_A 214 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS-VVSGS--LDRSVKLWNLQNANN 290 (393)
T ss_dssp ECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSE-EEEEE--TTSEEEEEEC-----
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCE-EEEEe--CCCEEEEEECCCCCC
Confidence 999 8999999999999999999887543332 357789999999999997 55555 69999999997642
Q ss_pred ----------ccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 263 ----------IPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 263 ----------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
.....+.+|...|.+++|+|++.+|++++.||.|++|+..
T Consensus 291 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~ 340 (393)
T 1erj_A 291 KSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKK 340 (393)
T ss_dssp ----------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETT
T ss_pred cccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECC
Confidence 1245677899999999999999999999999999999854
No 74
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=4.3e-39 Score=308.69 Aligned_cols=284 Identities=20% Similarity=0.271 Sum_probs=240.9
Q ss_pred CCcccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeeccc-CCcEEEEEcCCCcEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCI-EENHIATGATNGAVVV 78 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~l~~~~~dg~i~i 78 (330)
.|.+.|.+++|+|+|++++++ |+.|++||+.+++....+..+. ..|.+++|+|. ++.++++|+.||.|++
T Consensus 655 ~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~-------~~v~~~~~~~~~~~~~l~sg~~d~~v~v 727 (1249)
T 3sfz_A 655 AHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHS-------EQVNCCHFTNKSNHLLLATGSNDFFLKL 727 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCS-------SCEEEEEECSSSSCCEEEEEETTSCEEE
T ss_pred cCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCC-------CcEEEEEEecCCCceEEEEEeCCCeEEE
Confidence 589999999999999995444 9999999999998877665543 33699999983 3458899999999999
Q ss_pred EECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeee---------------------
Q psy6213 79 WNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFH--------------------- 137 (330)
Q Consensus 79 w~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--------------------- 137 (330)
||+.+ ......+.+|...|.+++|+| +++++++++.||.|++||+.+++....+.
T Consensus 728 wd~~~---~~~~~~~~~h~~~v~~~~~sp-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 803 (1249)
T 3sfz_A 728 WDLNQ---KECRNTMFGHTNSVNHCRFSP-DDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKC 803 (1249)
T ss_dssp EETTS---SSEEEEECCCSSCEEEEEECS-STTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCC
T ss_pred EECCC---cchhheecCCCCCEEEEEEec-CCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEE
Confidence 99988 778888899999999999999 89999999999999999987765433221
Q ss_pred ----------------------------------cCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccC
Q psy6213 138 ----------------------------------SNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAH 183 (330)
Q Consensus 138 ----------------------------------~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~ 183 (330)
+|...+.+++|+|++. ++++++.+|.|++||+.+ ......+.+|
T Consensus 804 ~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~dg~v~vwd~~~-~~~~~~~~~h 881 (1249)
T 3sfz_A 804 CSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDH-LAVIALSQYCVELWNIDS-RLKVADCRGH 881 (1249)
T ss_dssp CCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTT-EEEEECSSSCEEEEETTT-TEEEEEECCC
T ss_pred EEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCC-EEEEEeCCCeEEEEEcCC-CceeeecCCC
Confidence 4667889999999998 699999999999999998 6778888999
Q ss_pred CCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcc-------------------------------------ccceeccc
Q psy6213 184 SGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPS-------------------------------------LEYSINTI 226 (330)
Q Consensus 184 ~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-------------------------------------~~~~~~~~ 226 (330)
...|.+++|+|++++|++++.||.+++||+..... ........
T Consensus 882 ~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1249)
T 3sfz_A 882 LSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPE 961 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECC
T ss_pred ccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEccc
Confidence 99999999999999999999999999999754211 00011134
Q ss_pred cceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 227 ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 227 ~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
..+.+++|+|++++++++ + .+|.|++||+.++.. ...+.+|...|.+++|+|++++|++++.||.|++|+..
T Consensus 962 ~~i~~~~~sp~g~~l~~g-~--~~g~i~i~d~~~~~~-~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~ 1033 (1249)
T 3sfz_A 962 AQVSCCCLSPHLEYVAFG-D--EDGAIKIIELPNNRV-FSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQ 1033 (1249)
T ss_dssp SCEEEEEECTTSSEEEEE-E--TTSCCEEEETTTTSC-EEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETT
T ss_pred CcEEEEEEcCCCCEEEEE-c--CCCCEEEEEcCCCce-eeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 578999999999975554 4 599999999998875 77888999999999999999999999999999999854
No 75
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=9.4e-39 Score=267.47 Aligned_cols=278 Identities=11% Similarity=0.171 Sum_probs=221.3
Q ss_pred CCcccceEEEEeeC---CCeeecC--CCeEEEEEcCC-ccee-eeeceeeccccccccceeeeeecccCCcEEEEEcCCC
Q psy6213 2 AYLSPVHKHGLKAD---NGLAQPS--RNVFKIFLIKD-TEFV-ETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNG 74 (330)
Q Consensus 2 ~H~~~v~~~~~s~~---~~~~~~g--d~~i~iw~~~~-~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 74 (330)
.|.+.|++++|+|+ |+++++| ||.|++||+++ +... ..+..+ ...|.+++|+| ++++|++++.||
T Consensus 37 ~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h-------~~~v~~~~~~~-~~~~l~s~~~dg 108 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMH-------TGPVLDVCWSD-DGSKVFTASCDK 108 (368)
T ss_dssp CCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEEC-------SSCEEEEEECT-TSSEEEEEETTS
T ss_pred CCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccc-------cCCEEEEEECc-CCCEEEEEcCCC
Confidence 59999999999999 5885555 99999999997 4333 333322 33479999999 999999999999
Q ss_pred cEEEEECCCCCCCceeEEecccccceeEEEE--EecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCC
Q psy6213 75 AVVVWNLGQISRSKQERVFNDHKRTVNKVSF--HYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHS 152 (330)
Q Consensus 75 ~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~--~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 152 (330)
.|++||+.+ .+... +..|...|.+++| +| ++.+|++++.||.|++||+++++.+..+..+ ..+.++.+.++
T Consensus 109 ~v~iwd~~~---~~~~~-~~~~~~~v~~~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~-~~~~~~~~~~~- 181 (368)
T 3mmy_A 109 TAKMWDLSS---NQAIQ-IAQHDAPVKTIHWIKAP-NYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP-ERCYCADVIYP- 181 (368)
T ss_dssp EEEEEETTT---TEEEE-EEECSSCEEEEEEEECS-SCEEEEEEETTSEEEEECSSCSSCSEEEECS-SCEEEEEEETT-
T ss_pred cEEEEEcCC---CCcee-eccccCceEEEEEEeCC-CCCEEEEccCCCcEEEEECCCCcEEEEEecC-CCceEEEecCC-
Confidence 999999987 44443 5679999999999 76 7889999999999999999999998888855 46777777654
Q ss_pred CcEEEEEecCCcEEEEecCCCccceeeec-cCCCCeEEEEEcCCCCE----EEEEecCCcEEEEeCCCCc---cccceec
Q psy6213 153 PYAFASVSENGTIQQWDVRRPEKCFYQFT-AHSGPIFACDWHPEHAW----LATASRDKTIKVWDLSIKP---SLEYSIN 224 (330)
Q Consensus 153 ~~~~~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~----l~~~~~dg~i~i~d~~~~~---~~~~~~~ 224 (330)
.+++++.++.+++|+++.......... .+...+.++.+.++... +++++.||.|++||++... .......
T Consensus 182 --~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~ 259 (368)
T 3mmy_A 182 --MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKC 259 (368)
T ss_dssp --EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEEC
T ss_pred --eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeee
Confidence 578888999999999987544433332 23455666666655443 9999999999999998873 2333333
Q ss_pred ccc------------ceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeec
Q psy6213 225 TIA------------SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSR 292 (330)
Q Consensus 225 ~~~------------~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 292 (330)
+.. ++.+++|+|++++++ +++ .||.|++||+++++. +..+..|..+|.+++|+|++++|++++.
T Consensus 260 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~-s~~--~dg~i~iwd~~~~~~-~~~~~~~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 260 HRSNGTNTSAPQDIYAVNGIAFHPVHGTLA-TVG--SDGRFSFWDKDARTK-LKTSEQLDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp SEEC----CCCEEECCEEEEEECTTTCCEE-EEE--TTSCEEEEETTTTEE-EEECCCCSSCEEEEEECTTSSCEEEEEC
T ss_pred eecccccccccccccceEEEEEecCCCEEE-EEc--cCCeEEEEECCCCcE-EEEecCCCCCceEEEECCCCCeEEEEec
Confidence 433 699999999999754 454 599999999998866 7888899999999999999999999999
Q ss_pred CCeEeeee
Q psy6213 293 VSIIPRAK 300 (330)
Q Consensus 293 dg~i~iw~ 300 (330)
|+..+.|+
T Consensus 336 d~~~~~~~ 343 (368)
T 3mmy_A 336 YDWSKGHE 343 (368)
T ss_dssp CCSTTCGG
T ss_pred cccccccc
Confidence 98766665
No 76
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.6e-38 Score=274.55 Aligned_cols=278 Identities=18% Similarity=0.234 Sum_probs=231.1
Q ss_pred CCcccceEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecc-cCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSC-IEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iw 79 (330)
.|.++|++++|+|++.+++++ ||.|++||+++++....+..+. ..|.+++|++ .++.++++|+.||.|++|
T Consensus 160 ~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~-------~~v~~l~~~~~~~~~~l~s~s~d~~i~vw 232 (464)
T 3v7d_B 160 GHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHN-------STVRCLDIVEYKNIKYIVTGSRDNTLHVW 232 (464)
T ss_dssp CCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCS-------SCEEEEEEEESSSCEEEEEEETTSCEEEE
T ss_pred CCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCC-------CccEEEEEecCCCCCEEEEEcCCCcEEEe
Confidence 599999999999999446666 9999999999988776665443 3368888884 277899999999999999
Q ss_pred ECCCCCCCc--------------------eeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecC
Q psy6213 80 NLGQISRSK--------------------QERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSN 139 (330)
Q Consensus 80 ~~~~~~~~~--------------------~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 139 (330)
|+.+..... ....+.+|...+.++. + +++++++|+.|+.|++||+++++.+..+.+|
T Consensus 233 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~ 309 (464)
T 3v7d_B 233 KLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--G-HGNIVVSGSYDNTLIVWDVAQMKCLYILSGH 309 (464)
T ss_dssp ECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--E-ETTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred eCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--C-CCCEEEEEeCCCeEEEEECCCCcEEEEecCC
Confidence 998732211 2456778888888874 4 6899999999999999999999999999999
Q ss_pred CCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccc
Q psy6213 140 TESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSL 219 (330)
Q Consensus 140 ~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 219 (330)
...|.+++|+|+++ .+++++.||.|++||+++ ++++..+.+|...|.+++|+ +++|++++.||.|++||+++...
T Consensus 310 ~~~v~~~~~~~~~~-~l~sg~~dg~i~vwd~~~-~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~- 384 (464)
T 3v7d_B 310 TDRIYSTIYDHERK-RCISASMDTTIRIWDLEN-GELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSR- 384 (464)
T ss_dssp SSCEEEEEEETTTT-EEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE-
T ss_pred CCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCC-CcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCce-
Confidence 99999999999998 699999999999999998 67788899999999999997 57999999999999999998743
Q ss_pred cceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeee
Q psy6213 220 EYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRA 299 (330)
Q Consensus 220 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 299 (330)
.....+...+..++|+|++++ +++++ |+.|++||+++++........|...|.+++|+ +..++++++.||.+.+|
T Consensus 385 ~~~~~~~~~~~~~~~~~~~~~-l~~~~---dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 385 KFSYHHTNLSAITTFYVSDNI-LVSGS---ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp EEEEECTTCCCEEEEEECSSE-EEEEE---TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred eeeecCCCCccEEEEEeCCCE-EEEec---CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 334456677888999999996 66666 89999999999876333367788999999997 45566666777777666
No 77
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-39 Score=298.99 Aligned_cols=290 Identities=10% Similarity=0.031 Sum_probs=214.1
Q ss_pred CcccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceee-----ccccccccceeeeeecccCCcEEEEEcCCCc
Q psy6213 3 YLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRV-----GKNINLNFSCNDVAWSCIEENHIATGATNGA 75 (330)
Q Consensus 3 H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 75 (330)
|.+.|++++|+|+++++++| ||.|++||+++++.. .+..+. .....+...|.+++|+|.++..+++|+.||.
T Consensus 97 ~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~ 175 (902)
T 2oaj_A 97 VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVT 175 (902)
T ss_dssp CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCE
T ss_pred CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-cceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCc
Confidence 67889999999999996665 999999999987653 111100 1112344568999999955689999999999
Q ss_pred EEEEECCCCCCCceeEEeccc------------------ccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeee--
Q psy6213 76 VVVWNLGQISRSKQERVFNDH------------------KRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKI-- 135 (330)
Q Consensus 76 i~iw~~~~~~~~~~~~~~~~~------------------~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-- 135 (330)
| +||+.+ .+....+..| ...|.+++|+| ++.+|++|+.||.|++||+++++++..
T Consensus 176 v-lWd~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp-dg~~lasgs~Dg~i~lWd~~~g~~~~~r~ 250 (902)
T 2oaj_A 176 L-TYSLVE---NEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP-NSLHIITIHEDNSLVFWDANSGHMIMART 250 (902)
T ss_dssp E-EEETTT---TEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT-TSSEEEEEETTCCEEEEETTTCCEEEEEC
T ss_pred E-EEECCC---CceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC-CCCEEEEEECCCeEEEEECCCCcEEEEEe
Confidence 9 999987 5666666544 57899999999 899999999999999999998877643
Q ss_pred ee---c-------------CCCCeEEEEEc----CCCCcEEEEEecC---------------------------------
Q psy6213 136 FH---S-------------NTESVRDVEFN----PHSPYAFASVSEN--------------------------------- 162 (330)
Q Consensus 136 ~~---~-------------~~~~v~~~~~~----~~~~~~~~~~~~d--------------------------------- 162 (330)
+. . +..+|.+++|+ |++..++++|+.+
T Consensus 251 l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~ 330 (902)
T 2oaj_A 251 VFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYAN 330 (902)
T ss_dssp SSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHS
T ss_pred ecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcC
Confidence 21 1 23468899995 3333355555433
Q ss_pred -------------------------------------------CcEEEEecCCCcccee---------------------
Q psy6213 163 -------------------------------------------GTIQQWDVRRPEKCFY--------------------- 178 (330)
Q Consensus 163 -------------------------------------------g~i~i~d~~~~~~~~~--------------------- 178 (330)
|.|++||+.++.....
T Consensus 331 ~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s 410 (902)
T 2oaj_A 331 PKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAA 410 (902)
T ss_dssp CSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEE
T ss_pred ccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEE
Confidence 3444444432111000
Q ss_pred -------------------eeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccc--e---------eccccc
Q psy6213 179 -------------------QFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEY--S---------INTIAS 228 (330)
Q Consensus 179 -------------------~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~---------~~~~~~ 228 (330)
.+.+|...+.+++|+|++++|++|+.|++|++||+.++..... . ..|...
T Consensus 411 ~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~ 490 (902)
T 2oaj_A 411 SVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELA 490 (902)
T ss_dssp EEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCC
T ss_pred EcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCc
Confidence 0122333444566688999999999999999999988732110 1 156778
Q ss_pred eEEEEEcCCCCeEEEEeecccCCeEEEEEccCCC--------------------------------------------cc
Q psy6213 229 VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY--------------------------------------------IP 264 (330)
Q Consensus 229 v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~--------------------------------------------~~ 264 (330)
|.+++|+|++++ +++++ .||+|++||+.+++ .+
T Consensus 491 V~svafspdg~~-LAsgs--~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 567 (902)
T 2oaj_A 491 VDKISFAAETLE-LAVSI--ETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMP 567 (902)
T ss_dssp EEEEEEETTTTE-EEEEE--TTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEE
T ss_pred eeEEEecCCCCe-EEEEe--cCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccce
Confidence 999999999997 56666 69999999998652 23
Q ss_pred ceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 265 LASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 265 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
+..+.+|.+.|++++|+||| +||+|+.|++|++|+..
T Consensus 568 ~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~ 604 (902)
T 2oaj_A 568 STAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRR 604 (902)
T ss_dssp EEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETT
T ss_pred eEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECC
Confidence 56778899999999999999 99999999999999854
No 78
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.3e-38 Score=261.93 Aligned_cols=244 Identities=19% Similarity=0.314 Sum_probs=201.9
Q ss_pred cccceeeeee-----cccCCcEEEEEcCCCcEEEEECCCCCC----CceeEEecccccceeEEEEEecCCCEEEEEecCC
Q psy6213 50 LNFSCNDVAW-----SCIEENHIATGATNGAVVVWNLGQISR----SKQERVFNDHKRTVNKVSFHYVESNWLISGSQDG 120 (330)
Q Consensus 50 ~~~~v~~~~~-----~~~~~~~l~~~~~dg~i~iw~~~~~~~----~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~ 120 (330)
+...|++++| ++.++++|++|+.|+.|++||+..... ......+.+|...|.+++|+| ++.++++|+.|+
T Consensus 20 H~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~-~~~~l~s~s~D~ 98 (343)
T 2xzm_R 20 HSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQ-ENCFAISSSWDK 98 (343)
T ss_dssp CSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECS-STTEEEEEETTS
T ss_pred chhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECC-CCCEEEEEcCCC
Confidence 3445799999 654789999999999999999875321 345667889999999999998 899999999999
Q ss_pred cEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCcccee--eeccCCCCeEEEEEcCCC--
Q psy6213 121 TMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFY--QFTAHSGPIFACDWHPEH-- 196 (330)
Q Consensus 121 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~--~~~~~~~~i~~~~~~~~~-- 196 (330)
+|++||+++++.+..+.+|...|.+++|+|+++ .+++++.|+.|++||+.. ..... ....|...|.+++|+|++
T Consensus 99 ~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~-~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~ 176 (343)
T 2xzm_R 99 TLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNR-QILSAGAEREIKLWNILG-ECKFSSAEKENHSDWVSCVRYSPIMKS 176 (343)
T ss_dssp EEEEEETTSSCEEEEEECCCSCEEEEEECSSTT-EEEEEETTSCEEEEESSS-CEEEECCTTTSCSSCEEEEEECCCCCS
T ss_pred cEEEEECCCCcEEEEEcCCCCcEEEEEECCCCC-EEEEEcCCCEEEEEeccC-CceeeeecccCCCceeeeeeecccccc
Confidence 999999999999999999999999999999998 589999999999999974 22221 123688899999999987
Q ss_pred --------CEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEe
Q psy6213 197 --------AWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASF 268 (330)
Q Consensus 197 --------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~ 268 (330)
.+|++++.||.|++||.. .+.......|...|.+++|+|++++ +++++ .|+.|++||+.....+...+
T Consensus 177 ~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~~~v~~~~~s~~g~~-l~sgs--~dg~v~iwd~~~~~~~~~~~ 252 (343)
T 2xzm_R 177 ANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHESNVNHLSISPNGKY-IATGG--KDKKLLIWDILNLTYPQREF 252 (343)
T ss_dssp CSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCSSCEEEEEECTTSSE-EEEEE--TTCEEEEEESSCCSSCSEEE
T ss_pred ccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCccccceEEEECCCCCE-EEEEc--CCCeEEEEECCCCcccceee
Confidence 799999999999999954 3345556678899999999999997 55555 69999999996555434444
Q ss_pred ecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 269 TEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 269 ~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
.+...|.+++|+|++++++ ++.|+.|++|+..
T Consensus 253 -~~~~~v~~v~~sp~~~~la-~~~d~~v~iw~~~ 284 (343)
T 2xzm_R 253 -DAGSTINQIAFNPKLQWVA-VGTDQGVKIFNLM 284 (343)
T ss_dssp -ECSSCEEEEEECSSSCEEE-EEESSCEEEEESS
T ss_pred -cCCCcEEEEEECCCCCEEE-EECCCCEEEEEeC
Confidence 3456799999999998776 4568889999864
No 79
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-38 Score=267.95 Aligned_cols=245 Identities=19% Similarity=0.289 Sum_probs=207.7
Q ss_pred cceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEec-CCCEEEEEecCCcEEEEEeecC
Q psy6213 52 FSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYV-ESNWLISGSQDGTMRLFDIRCQ 130 (330)
Q Consensus 52 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~-~~~~l~~~~~d~~i~i~d~~~~ 130 (330)
..|.+++|+| ++++|++|+.||.|++|++.. ........+..|...|.+++|+|. ++++|++++.||.|++||++++
T Consensus 12 ~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 89 (379)
T 3jrp_A 12 ELIHDAVLDY-YGKRLATCSSDKTIKIFEVEG-ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG 89 (379)
T ss_dssp CCEEEEEECS-SSSEEEEEETTSCEEEEEEET-TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT
T ss_pred ccEEEEEEcC-CCCEEEEEECCCcEEEEecCC-CcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC
Confidence 3479999999 999999999999999999973 125677788899999999999872 2899999999999999999998
Q ss_pred c--eeeeeecCCCCeEEEEEcCC--CCcEEEEEecCCcEEEEecCCCc-cceeeeccCCCCeEEEEEcC-----------
Q psy6213 131 E--STKIFHSNTESVRDVEFNPH--SPYAFASVSENGTIQQWDVRRPE-KCFYQFTAHSGPIFACDWHP----------- 194 (330)
Q Consensus 131 ~--~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~i~~~~~~~----------- 194 (330)
+ .+..+..|...|.+++|+|+ +. ++++++.||.|++||+++.. .....+..|...|.+++|+|
T Consensus 90 ~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 168 (379)
T 3jrp_A 90 RWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG 168 (379)
T ss_dssp EEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---------
T ss_pred ceeEeeeecCCCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccC
Confidence 7 67777889999999999999 77 69999999999999998743 23446678999999999999
Q ss_pred --CCCEEEEEecCCcEEEEeCCCCccc----cceeccccceEEEEEcCC---CCeEEEEeecccCCeEEEEEccCCCcc-
Q psy6213 195 --EHAWLATASRDKTIKVWDLSIKPSL----EYSINTIASVSRIKWRPQ---RKFHLASCSLVVDSSVNVWDIRRPYIP- 264 (330)
Q Consensus 195 --~~~~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~~~~~i~i~d~~~~~~~- 264 (330)
++.+|++++.||.|++||++..... .....|...|.+++|+|+ +.+ +++++ .||.|++||++.+..+
T Consensus 169 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~-l~s~~--~dg~i~iwd~~~~~~~~ 245 (379)
T 3jrp_A 169 TKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY-LASVS--QDRTCIIWTQDNEQGPW 245 (379)
T ss_dssp -CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE-EEEEE--TTSCEEEEEESSTTSCC
T ss_pred CCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCe-EEEEe--CCCEEEEEeCCCCCccc
Confidence 6999999999999999999876432 334457889999999999 675 55565 6999999999987422
Q ss_pred ---ceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 265 ---LASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 265 ---~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
......|...|.+++|+|++++|++++.||.|++|+..
T Consensus 246 ~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 246 KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp EEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred eeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 22223478899999999999999999999999999854
No 80
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-39 Score=296.64 Aligned_cols=227 Identities=15% Similarity=0.210 Sum_probs=182.6
Q ss_pred CCcccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|.+.|++++|+|+++++++| ||.|+||+....+...... ....|.+++|+| +++|++++.|+.|++|
T Consensus 15 gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~--------~~~~V~~l~fsp--g~~L~S~s~D~~v~lW 84 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLE--------DRSAIKEMRFVK--GIYLVVINAKDTVYVL 84 (902)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECS--------SCCCEEEEEEET--TTEEEEEETTCEEEEE
T ss_pred CCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcC--------CCCCEEEEEEcC--CCEEEEEECcCeEEEE
Confidence 588999999999999996666 9999999988766543321 133579999999 5599999999999999
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCcee-----------eeeecCCCCeEEEEE
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQEST-----------KIFHSNTESVRDVEF 148 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-----------~~~~~~~~~v~~~~~ 148 (330)
|+.+ .+.+..+. |...|++++|+| +++++++|+.||.|++||+++++.. ..+.+|..+|.+++|
T Consensus 85 d~~~---~~~~~~~~-~~~~V~~v~~sp-~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~ 159 (902)
T 2oaj_A 85 SLYS---QKVLTTVF-VPGKITSIDTDA-SLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQW 159 (902)
T ss_dssp ETTT---CSEEEEEE-CSSCEEEEECCT-TCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEE
T ss_pred ECCC---CcEEEEEc-CCCCEEEEEECC-CCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEE
Confidence 9987 56666665 668999999999 8999999999999999999887653 234568899999999
Q ss_pred cCCCCcEEEEEecCCcEEEEecCCCccceeeeccC------------------CCCeEEEEEcCCCCEEEEEecCCcEEE
Q psy6213 149 NPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAH------------------SGPIFACDWHPEHAWLATASRDKTIKV 210 (330)
Q Consensus 149 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~------------------~~~i~~~~~~~~~~~l~~~~~dg~i~i 210 (330)
+|++...+++|+.||.| +||+++ .++...+..| ...|.+++|+|+|++|++++.||.|++
T Consensus 160 sp~~~~~l~~g~~dg~v-lWd~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~l 237 (902)
T 2oaj_A 160 NPRDIGTVLISYEYVTL-TYSLVE-NEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVF 237 (902)
T ss_dssp ETTEEEEEEEECSSCEE-EEETTT-TEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEE
T ss_pred ccCCCCEEEEEeCCCcE-EEECCC-CceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEE
Confidence 99765579999999999 999998 5556666544 577999999999999999999999999
Q ss_pred EeCCCCccccc-ee-----------------ccccceEEEEEc----CCCCeEEEEe
Q psy6213 211 WDLSIKPSLEY-SI-----------------NTIASVSRIKWR----PQRKFHLASC 245 (330)
Q Consensus 211 ~d~~~~~~~~~-~~-----------------~~~~~v~~~~~~----~~~~~l~~~~ 245 (330)
||+++++.+.. .. .+..+|.+++|+ |++..+++++
T Consensus 238 Wd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg 294 (902)
T 2oaj_A 238 WDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISH 294 (902)
T ss_dssp EETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEE
T ss_pred EECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeC
Confidence 99988754321 00 124478999994 4444455555
No 81
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.7e-37 Score=265.50 Aligned_cols=270 Identities=21% Similarity=0.351 Sum_probs=230.7
Q ss_pred CCcccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|.+.|.. +++++|+++++| ||.|++||+.+++....+..|.. .|.+++|+ ++++++|+.||.|++|
T Consensus 116 ~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~-------~v~~~~~~---~~~l~s~~~dg~i~vw 184 (445)
T 2ovr_B 116 GHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTG-------GVWSSQMR---DNIIISGSTDRTLKVW 184 (445)
T ss_dssp CSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSS-------CEEEEEEE---TTEEEEEETTSCEEEE
T ss_pred ccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCC-------CEEEEEec---CCEEEEEeCCCeEEEE
Confidence 47777643 356678885555 99999999999988776654433 36888886 4699999999999999
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEE
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASV 159 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 159 (330)
|+.+ .+....+.+|...|.++.|+ ++.+++|+.||.|++||+++++.+..+..|...+.+++| +++ .++++
T Consensus 185 d~~~---~~~~~~~~~h~~~v~~~~~~---~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~ 255 (445)
T 2ovr_B 185 NAET---GECIHTLYGHTSTVRCMHLH---EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGR-RVVSG 255 (445)
T ss_dssp ETTT---TEEEEEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSS-CEEEE
T ss_pred ECCc---CcEEEEECCCCCcEEEEEec---CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCC-EEEEE
Confidence 9988 78888899999999999986 467999999999999999999999999999999999999 555 59999
Q ss_pred ecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcCCCC
Q psy6213 160 SENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRK 239 (330)
Q Consensus 160 ~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 239 (330)
+.||.|++||+++ .+.+..+.+|...|.++.| ++.++++++.||.|++||+++++.......+...+.++.+++ .
T Consensus 256 ~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~--~ 330 (445)
T 2ovr_B 256 AYDFMVKVWDPET-ETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD--N 330 (445)
T ss_dssp ETTSCEEEEEGGG-TEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET--T
T ss_pred cCCCEEEEEECCC-CcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeC--C
Confidence 9999999999998 6778888899999999999 788999999999999999999877777777888888888854 4
Q ss_pred eEEEEeecccCCeEEEEEccCCCccceEeec---CCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 240 FHLASCSLVVDSSVNVWDIRRPYIPLASFTE---HKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 240 ~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
+ +++++ .||.|++||+++++. +..+.. |...|.+++|+ +++|++++.||.|++|+..
T Consensus 331 ~-l~~~~--~dg~i~vwd~~~~~~-~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~ 390 (445)
T 2ovr_B 331 I-LVSGN--ADSTVKIWDIKTGQC-LQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLK 390 (445)
T ss_dssp E-EEEEE--TTSCEEEEETTTCCE-EEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETT
T ss_pred E-EEEEe--CCCeEEEEECCCCcE-EEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECC
Confidence 4 55555 699999999998875 667765 88899999995 6899999999999999854
No 82
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.6e-37 Score=266.98 Aligned_cols=271 Identities=17% Similarity=0.316 Sum_probs=231.6
Q ss_pred CCcccceEEEEeeCCCe-eecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGL-AQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~-~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|.++|.+++|+ +.+ ++++ ||.|++||+.+++....+..+.. .|.+++|+ ++.+++|+.||.|++|
T Consensus 157 ~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~-------~v~~~~~~---~~~l~s~s~dg~i~~w 224 (445)
T 2ovr_B 157 GHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTS-------TVRCMHLH---EKRVVSGSRDATLRVW 224 (445)
T ss_dssp CCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSS-------CEEEEEEE---TTEEEEEETTSEEEEE
T ss_pred CCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCC-------cEEEEEec---CCEEEEEeCCCEEEEE
Confidence 589999999998 456 5555 99999999999887766654433 36888885 4779999999999999
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEE
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASV 159 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 159 (330)
|+.+ .+....+..|...|.++.| +++++++|+.||.|++||+++++.+..+..|...+.+++| ++. .++++
T Consensus 225 d~~~---~~~~~~~~~~~~~v~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~-~l~~~ 295 (445)
T 2ovr_B 225 DIET---GQCLHVLMGHVAAVRCVQY---DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGI-HVVSG 295 (445)
T ss_dssp ESSS---CCEEEEEECCSSCEEEEEE---CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSS-EEEEE
T ss_pred ECCC---CcEEEEEcCCcccEEEEEE---CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCC-EEEEE
Confidence 9988 7788888899999999998 5788999999999999999999999999999999999999 555 69999
Q ss_pred ecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceec---cccceEEEEEcC
Q psy6213 160 SENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSIN---TIASVSRIKWRP 236 (330)
Q Consensus 160 ~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~v~~~~~~~ 236 (330)
+.||.|++||+++ .+.+..+..|...+.++.++ ++++++++.||.|++||+++++....... +...|.+++|++
T Consensus 296 ~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 372 (445)
T 2ovr_B 296 SLDTSIRVWDVET-GNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK 372 (445)
T ss_dssp ETTSCEEEEETTT-CCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS
T ss_pred eCCCeEEEEECCC-CCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECC
Confidence 9999999999998 66788888999999988875 67999999999999999998866555443 778899999964
Q ss_pred CCCeEEEEeecccCCeEEEEEccCCCccceEe-----ecCCCCeEEEEEecCCCEEEEeecCCe----Eeeeecc
Q psy6213 237 QRKFHLASCSLVVDSSVNVWDIRRPYIPLASF-----TEHKDVVSGLAWRGDPQLFIASSRVSI----IPRAKNI 302 (330)
Q Consensus 237 ~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~s~~~dg~----i~iw~~~ 302 (330)
++ +++++ .||.|++||+.+++. +..+ ..|.+.|++++|+|++.++++++.||. |.+|+..
T Consensus 373 --~~-l~s~~--~dg~v~iwd~~~~~~-~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 373 --NF-VITSS--DDGTVKLWDLKTGEF-IRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp --SE-EEEEE--TTSEEEEEETTTCCE-EEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred --CE-EEEEe--CCCeEEEEECCCCce-eeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECC
Confidence 44 66666 699999999999876 5555 467889999999999999999999997 9998654
No 83
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-39 Score=274.26 Aligned_cols=238 Identities=20% Similarity=0.283 Sum_probs=196.0
Q ss_pred ceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCC--ceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecC
Q psy6213 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQISRS--KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQ 130 (330)
Q Consensus 53 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~--~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (330)
+|.+++|+| ++++|++|+.||.|++||+.+ . +....+.+|...|.+++|+| ++++|++++.|+.|++||+.++
T Consensus 13 ~v~~~~~s~-~g~~l~~~~~d~~i~iw~~~~---~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~s~d~~v~vwd~~~~ 87 (377)
T 3dwl_C 13 PSYEHAFNS-QRTEFVTTTATNQVELYEQDG---NGWKHARTFSDHDKIVTCVDWAP-KSNRIVTCSQDRNAYVYEKRPD 87 (377)
T ss_dssp CCSCCEECS-SSSEEECCCSSSCBCEEEEET---TEEEECCCBCCCSSCEEEEEECT-TTCCEEEEETTSSEEEC-----
T ss_pred cEEEEEECC-CCCEEEEecCCCEEEEEEccC---CceEEEEEEecCCceEEEEEEeC-CCCEEEEEeCCCeEEEEEcCCC
Confidence 479999999 999999999999999999987 4 67777889999999999998 8899999999999999999987
Q ss_pred c---eeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCcc--ceeeecc-CCCCeEEEEEcCCCCEEEEEec
Q psy6213 131 E---STKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEK--CFYQFTA-HSGPIFACDWHPEHAWLATASR 204 (330)
Q Consensus 131 ~---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~--~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~ 204 (330)
+ ....+..|...|.+++|+|+++ .|++++.|+.|++||+++... ....+.. |...|.+++|+|++++|++++.
T Consensus 88 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 88 GTWKQTLVLLRLNRAATFVRWSPNED-KFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp -CCCCEEECCCCSSCEEEEECCTTSS-CCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred CceeeeeEecccCCceEEEEECCCCC-EEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 7 5667778999999999999998 589999999999999997432 4566666 9999999999999999999999
Q ss_pred CCcEEEEeCCCC------------------ccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCcc--
Q psy6213 205 DKTIKVWDLSIK------------------PSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIP-- 264 (330)
Q Consensus 205 dg~i~i~d~~~~------------------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~-- 264 (330)
|+.|++||++.. +..... .|...|.+++|+|++++ +++++ .|+.|++||++++..+
T Consensus 167 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~-l~~~~--~d~~i~iwd~~~~~~~~~ 242 (377)
T 3dwl_C 167 DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNA-LAYAG--HDSSVTIAYPSAPEQPPR 242 (377)
T ss_dssp SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSC-EEEEE--TTTEEC-CEECSTTSCEE
T ss_pred CCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCE-EEEEe--CCCcEEEEECCCCCCcce
Confidence 999999998532 122222 77888999999999997 44555 5999999999988652
Q ss_pred -ceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeec
Q psy6213 265 -LASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKN 301 (330)
Q Consensus 265 -~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~ 301 (330)
+..+..|...|.+++|+|++++|++++.++.+ +|..
T Consensus 243 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~ 279 (377)
T 3dwl_C 243 ALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQG 279 (377)
T ss_dssp ECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECC
T ss_pred eeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEe
Confidence 56788999999999999999999999877766 5543
No 84
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=4.7e-38 Score=289.57 Aligned_cols=285 Identities=17% Similarity=0.224 Sum_probs=239.7
Q ss_pred CCcccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|.++|++++|+|++++++++ ||.|++||+.+++....+..+.. .|.+++|+| ++.+|++++.||.|++|
T Consensus 53 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~-------~v~~~~~s~-~~~~l~~~~~dg~i~vw 124 (814)
T 3mkq_A 53 VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD-------YIRSIAVHP-TKPYVLSGSDDLTVKLW 124 (814)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSS-------CEEEEEECS-SSSEEEEEETTSEEEEE
T ss_pred cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCC-------CEEEEEEeC-CCCEEEEEcCCCEEEEE
Confidence 488999999999999995555 99999999999887766654433 369999999 99999999999999999
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCC-CCeEEEEEcC--CCCcEE
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNT-ESVRDVEFNP--HSPYAF 156 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~~--~~~~~~ 156 (330)
|+.+. ......+..|...|.+++|+|.+++.+++++.||.|++||+.+++....+..+. ..+.+++|+| +++ .+
T Consensus 125 ~~~~~--~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l 201 (814)
T 3mkq_A 125 NWENN--WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP-YM 201 (814)
T ss_dssp EGGGT--SEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCC-EE
T ss_pred ECCCC--ceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCC-EE
Confidence 99762 366677888999999999998677899999999999999998888877776654 8899999999 887 69
Q ss_pred EEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcC
Q psy6213 157 ASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRP 236 (330)
Q Consensus 157 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~ 236 (330)
++++.||.|++||+++ ......+..|...|.+++|+|+++++++++.||.|++||+.+++.......+...+.+++|+|
T Consensus 202 ~~~~~dg~i~~~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~ 280 (814)
T 3mkq_A 202 ITASDDLTIKIWDYQT-KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHP 280 (814)
T ss_dssp EEECTTSEEEEEETTT-TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECT
T ss_pred EEEeCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEcc
Confidence 9999999999999988 667888888999999999999999999999999999999999877777777788999999999
Q ss_pred CCCeE-EEEeecccCCeEEEEEccCCCccc------------------------------------------eEeecCCC
Q psy6213 237 QRKFH-LASCSLVVDSSVNVWDIRRPYIPL------------------------------------------ASFTEHKD 273 (330)
Q Consensus 237 ~~~~l-~~~~~~~~~~~i~i~d~~~~~~~~------------------------------------------~~~~~~~~ 273 (330)
++..+ ++++. ++.+.+|++....... .....+..
T Consensus 281 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (814)
T 3mkq_A 281 TGRKNYIASGF---DNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDV 357 (814)
T ss_dssp TCGGGEEEEEE---TTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSS
T ss_pred CCCceEEEEEe---CCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCcc
Confidence 99754 56665 8889999876432110 11123445
Q ss_pred CeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 274 VVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 274 ~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
.+.+++|+|+|++|++++ ||.+.+|...
T Consensus 358 ~~~~~~~spdg~~la~~~-~~~~~i~~~~ 385 (814)
T 3mkq_A 358 FPQSLAHSPNGRFVTVVG-DGEYVIYTAL 385 (814)
T ss_dssp CCSEEEECTTSSEEEEEE-TTEEEEEETT
T ss_pred CCceeEECCCCCEEEEec-CCEEEEEECc
Confidence 678899999999888887 8889988743
No 85
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.9e-39 Score=278.45 Aligned_cols=247 Identities=12% Similarity=0.165 Sum_probs=196.9
Q ss_pred cccceeeeeecccCC---------cEEEE-------------------EcCCCcEEEEECCCCCCC-ceeEEecccccce
Q psy6213 50 LNFSCNDVAWSCIEE---------NHIAT-------------------GATNGAVVVWNLGQISRS-KQERVFNDHKRTV 100 (330)
Q Consensus 50 ~~~~v~~~~~~~~~~---------~~l~~-------------------~~~dg~i~iw~~~~~~~~-~~~~~~~~~~~~i 100 (330)
+...|.+++|+| ++ ++||+ ++.|+.|+||++.+.... .....+..|.+.|
T Consensus 132 ~~~~V~sv~w~p-~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V 210 (524)
T 2j04_B 132 VGGLVTDIAWLN-IEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEV 210 (524)
T ss_dssp CCC--CCCSCEE-ECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSE
T ss_pred CCCceeEEEecc-cCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcE
Confidence 345678899988 54 56666 457789999998763211 1123456678899
Q ss_pred eEEEEEec-----CCCEEEEEecCCcEEEEEeecCce-----------eeeeecCCCCeEEEEEcCCCCcEEEEEecCCc
Q psy6213 101 NKVSFHYV-----ESNWLISGSQDGTMRLFDIRCQES-----------TKIFHSNTESVRDVEFNPHSPYAFASVSENGT 164 (330)
Q Consensus 101 ~~i~~~~~-----~~~~l~~~~~d~~i~i~d~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~ 164 (330)
.+++|+|. ++.+|++++.||+|++||+.+++. ...+.+|...|++++|+|++ .|++|+.||+
T Consensus 211 ~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~--~lasgs~Dgt 288 (524)
T 2j04_B 211 WDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT--TVVCGFKNGF 288 (524)
T ss_dssp EEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS--EEEEEETTSE
T ss_pred EEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC--eEEEEeCCCE
Confidence 99999983 257999999999999999986642 23667788999999999864 6999999999
Q ss_pred EEEEecCCCccceeeeccCCCCeEEE--EEcCCC-CEEEEEecCCcEEEEeCCCCccccceeccc--cceEEEEEcCCCC
Q psy6213 165 IQQWDVRRPEKCFYQFTAHSGPIFAC--DWHPEH-AWLATASRDKTIKVWDLSIKPSLEYSINTI--ASVSRIKWRPQRK 239 (330)
Q Consensus 165 i~i~d~~~~~~~~~~~~~~~~~i~~~--~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~v~~~~~~~~~~ 239 (330)
|++||++++..+...+..|...|.++ .|+|++ .+|++++.|++|++||+++++.......+. ..+.+++|+|+++
T Consensus 289 V~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~ 368 (524)
T 2j04_B 289 VAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIY 368 (524)
T ss_dssp EEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTT
T ss_pred EEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcC
Confidence 99999997555666788999999999 578887 899999999999999999875544444443 3578999999999
Q ss_pred eEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeeccc
Q psy6213 240 FHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIK 303 (330)
Q Consensus 240 ~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 303 (330)
. +++++ .|+.|++||++++.. +..+.+|.+.|++++|+|++++|++|+.||+|++|+...
T Consensus 369 ~-l~s~~--~d~tv~lwd~~~~~~-~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 369 S-YIYSD--GASSLRAVPSRAAFA-VHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp E-EEEEC--SSSEEEEEETTCTTC-CEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred e-EEEeC--CCCcEEEEECccccc-ceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 7 44544 599999999998876 677889999999999999999999999999999998643
No 86
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.1e-37 Score=259.81 Aligned_cols=241 Identities=17% Similarity=0.199 Sum_probs=207.3
Q ss_pred cceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCc--eeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeec
Q psy6213 52 FSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSK--QERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC 129 (330)
Q Consensus 52 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~--~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (330)
.+|.+++|+| ++++|++++.|+.|++||+.+ .+ ....+..|...|.+++|+| ++++|++++.||.|++||+++
T Consensus 9 ~~i~~~~~s~-~~~~l~~~~~d~~v~i~~~~~---~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~ 83 (372)
T 1k8k_C 9 EPISCHAWNK-DRTQIAICPNNHEVHIYEKSG---NKWVQVHELKEHNGQVTGVDWAP-DSNRIVTCGTDRNAYVWTLKG 83 (372)
T ss_dssp SCCCEEEECT-TSSEEEEECSSSEEEEEEEET---TEEEEEEEEECCSSCEEEEEEET-TTTEEEEEETTSCEEEEEEET
T ss_pred CCeEEEEECC-CCCEEEEEeCCCEEEEEeCCC---CcEEeeeeecCCCCcccEEEEeC-CCCEEEEEcCCCeEEEEECCC
Confidence 3479999999 999999999999999999987 44 7788889999999999998 899999999999999999998
Q ss_pred Cceeeee--ecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCcc---ceeeeccCCCCeEEEEEcCCCCEEEEEec
Q psy6213 130 QESTKIF--HSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEK---CFYQFTAHSGPIFACDWHPEHAWLATASR 204 (330)
Q Consensus 130 ~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 204 (330)
++....+ ..|...|.+++|+|+++ .+++++.||.|++||++.... .......|...|.+++|+|++++|++++.
T Consensus 84 ~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 84 RTWKPTLVILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp TEEEEEEECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CeeeeeEEeecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 8754443 56888999999999998 699999999999999987442 22334668899999999999999999999
Q ss_pred CCcEEEEeCC------------------CCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccce
Q psy6213 205 DKTIKVWDLS------------------IKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266 (330)
Q Consensus 205 dg~i~i~d~~------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~ 266 (330)
||.|++||++ .++.......+...+.+++|+|+++++++ ++ .|+.|++||+++++. +.
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~--~d~~i~i~d~~~~~~-~~ 238 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAW-VS--HDSTVCLADADKKMA-VA 238 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEE-EE--TTTEEEEEEGGGTTE-EE
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEE-Ee--CCCEEEEEECCCCce-eE
Confidence 9999999964 33344444467889999999999997554 44 599999999998875 78
Q ss_pred EeecCCCCeEEEEEecCCCEEEEeecCCeEeeeeccc
Q psy6213 267 SFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIK 303 (330)
Q Consensus 267 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 303 (330)
.+..|..+|.+++|+|++.+|+++ .|+.|++|+...
T Consensus 239 ~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 239 TLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 888999999999999999988877 999999998654
No 87
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.1e-38 Score=264.14 Aligned_cols=247 Identities=19% Similarity=0.297 Sum_probs=203.3
Q ss_pred CCcccceEEEEeeCCCeeecC--CCeEEEEEcCCc--ceeeeeceeeccccccccceeeeeecccC--CcEEEEEcCCCc
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDT--EFVETHNLRVGKNINLNFSCNDVAWSCIE--ENHIATGATNGA 75 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~dg~ 75 (330)
.|.++|++++|+|++++++++ ||.|++|++..+ +....+..| ...|.+++|+| + +++|++++.||.
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h-------~~~v~~~~~~~-~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 9 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGH-------EGPVWRVDWAH-PKFGTILASCSYDGK 80 (379)
T ss_dssp ECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCC-------SSCEEEEEECC-GGGCSEEEEEETTSC
T ss_pred CCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCC-------CCcEEEEEeCC-CCCCCEEEEeccCCE
Confidence 599999999999999995555 999999999843 333333333 33479999987 5 899999999999
Q ss_pred EEEEECCCCCCCceeEEecccccceeEEEEEecC--CCEEEEEecCCcEEEEEeecCc--eeeeeecCCCCeEEEEEcC-
Q psy6213 76 VVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVE--SNWLISGSQDGTMRLFDIRCQE--STKIFHSNTESVRDVEFNP- 150 (330)
Q Consensus 76 i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~--~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~- 150 (330)
|++||+.+. .......+..|...|.+++|+| + +.+|++++.|+.|++||++++. ....+..|...|.+++|+|
T Consensus 81 v~iwd~~~~-~~~~~~~~~~~~~~v~~~~~~~-~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~ 158 (379)
T 3jrp_A 81 VLIWKEENG-RWSQIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 158 (379)
T ss_dssp EEEEEEETT-EEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCC
T ss_pred EEEEEcCCC-ceeEeeeecCCCcceEEEEeCC-CCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCc
Confidence 999999871 1226677788999999999998 6 8999999999999999998874 3445667899999999999
Q ss_pred ------------CCCcEEEEEecCCcEEEEecCCCcc---ceeeeccCCCCeEEEEEcCC---CCEEEEEecCCcEEEEe
Q psy6213 151 ------------HSPYAFASVSENGTIQQWDVRRPEK---CFYQFTAHSGPIFACDWHPE---HAWLATASRDKTIKVWD 212 (330)
Q Consensus 151 ------------~~~~~~~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d 212 (330)
++. ++++++.||.|++||+++... ....+..|...|.+++|+|+ +++|++++.||.|++||
T Consensus 159 ~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 159 TIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp C----------CTTC-EEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEE
T ss_pred cccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEe
Confidence 466 799999999999999986432 34567789999999999999 89999999999999999
Q ss_pred CCCCcc-----ccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCC
Q psy6213 213 LSIKPS-----LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY 262 (330)
Q Consensus 213 ~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~ 262 (330)
++.... ......+...+.+++|+|+++++++++ .||.|++|++....
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~---~dg~i~iw~~~~~~ 289 (379)
T 3jrp_A 238 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG---GDNKVTLWKENLEG 289 (379)
T ss_dssp ESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE---SSSSEEEEEEEETT
T ss_pred CCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEec---CCCcEEEEeCCCCC
Confidence 988632 222334678899999999999855555 59999999998543
No 88
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=6e-38 Score=268.20 Aligned_cols=250 Identities=20% Similarity=0.393 Sum_probs=207.1
Q ss_pred CCcccceEEEEeeC-CCeeec-C-CCeEEEEEcCC----------cceeeeeceeeccccccccceeeeeecccCCc-EE
Q psy6213 2 AYLSPVHKHGLKAD-NGLAQP-S-RNVFKIFLIKD----------TEFVETHNLRVGKNINLNFSCNDVAWSCIEEN-HI 67 (330)
Q Consensus 2 ~H~~~v~~~~~s~~-~~~~~~-g-d~~i~iw~~~~----------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~l 67 (330)
.|.+.|++++|+|+ +.++++ + +|.|++|++.. ......+.. +...+.+++|+| ++. +|
T Consensus 126 ~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~-------h~~~v~~l~~~~-~~~~~l 197 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRG-------HQKEGYGLSWNP-NLNGYL 197 (430)
T ss_dssp EESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEEC-------CSSCCCCEEECT-TSTTEE
T ss_pred cCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecC-------CCCCeEEEEeCC-CCCCeE
Confidence 58999999999998 556554 4 99999999986 222222222 233469999999 666 99
Q ss_pred EEEcCCCcEEEEECCCCCCC----ceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecC---ceeeeeecCC
Q psy6213 68 ATGATNGAVVVWNLGQISRS----KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQ---ESTKIFHSNT 140 (330)
Q Consensus 68 ~~~~~dg~i~iw~~~~~~~~----~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~ 140 (330)
++|+.||.|++|++...... .....+..|...|.+++|+|.++.+|++++.||.|++||++++ +.+..+..|.
T Consensus 198 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 277 (430)
T 2xyi_A 198 LSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHT 277 (430)
T ss_dssp EEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCS
T ss_pred EEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCC
Confidence 99999999999999873221 1245667899999999999977899999999999999999977 5677788899
Q ss_pred CCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCC-EEEEEecCCcEEEEeCCCC---
Q psy6213 141 ESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHA-WLATASRDKTIKVWDLSIK--- 216 (330)
Q Consensus 141 ~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~--- 216 (330)
..|++++|+|++++++++|+.||.|++||+++...++..+..|...|.+++|+|+++ +|++++.||.|++||+...
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~ 357 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEE 357 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCC
T ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccc
Confidence 999999999999988999999999999999986777888889999999999999985 7999999999999999873
Q ss_pred -----------ccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCC
Q psy6213 217 -----------PSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRP 261 (330)
Q Consensus 217 -----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~ 261 (330)
+.......|...|.+++|+|++++++++++ .||.|++|++...
T Consensus 358 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s--~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 358 QSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVS--EDNIMQVWQMAEN 411 (430)
T ss_dssp CCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEE--TTSEEEEEEECHH
T ss_pred cCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEE--CCCCEEEeEcccc
Confidence 223334456788999999999996677777 7999999998743
No 89
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=2.6e-37 Score=257.49 Aligned_cols=274 Identities=15% Similarity=0.173 Sum_probs=209.7
Q ss_pred CCcccceEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEE-EEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHI-ATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~i~iw 79 (330)
.|.++|++++|+|||+++++| +..++||++++++.......+ .+..+++.+ +++.+ ++++.|+.|++|
T Consensus 17 ~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~---------~~~~~~~~~-~~~~~~~~~~~d~~v~iW 86 (355)
T 3vu4_A 17 HVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMR---------HLSKVRMLH-RTNYVAFVTGVKEVVHIW 86 (355)
T ss_dssp --CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECS---------CCCEEEECT-TSSEEEEECSSTTEEEEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecC---------CeEEEEEcC-CCCEEEEEECCccEEEEE
Confidence 488999999999999998888 777899999876654332211 146778887 56655 678888999999
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecC-ceeeeeecCCCCeEEEEEcCCCCcEEEE
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQ-ESTKIFHSNTESVRDVEFNPHSPYAFAS 158 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 158 (330)
|..+ .+.+..+. +...|.++++++ +.++++. |+.|++||+.++ +.+..+.. +...+++++ . .++.
T Consensus 87 d~~~---~~~~~~~~-~~~~v~~v~~~~---~~~~~~~-~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~-~la~ 152 (355)
T 3vu4_A 87 DDVK---KQDVSRIK-VDAPVKDLFLSR---EFIVVSY-GDVISVFKFGNPWKRITDDIR---FGGVCEFSN--G-LLVY 152 (355)
T ss_dssp ETTT---TEEEEEEE-CSSCEEEEEECS---SEEEEEE-TTEEEEEESSTTCCBSSCCEE---EEEEEEEET--T-EEEE
T ss_pred ECCC---CcEEEEEE-CCCceEEEEEcC---CEEEEEE-cCEEEEEECCCCceeeEEecc---CCceEEEEc--c-EEEE
Confidence 9988 66666665 667999999985 3344444 789999999988 67666664 455566777 4 3544
Q ss_pred --EecCCcEEEEecCCCc--------------cc-eeeeccCCCCeEEEEEcCCCCEEEEEecCCc-EEEEeCCCCcccc
Q psy6213 159 --VSENGTIQQWDVRRPE--------------KC-FYQFTAHSGPIFACDWHPEHAWLATASRDKT-IKVWDLSIKPSLE 220 (330)
Q Consensus 159 --~~~dg~i~i~d~~~~~--------------~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~ 220 (330)
|+.+|.|++||+++.. .+ ...+.+|.+.|.+++|+|++++|++++.|++ |++||+++++...
T Consensus 153 ~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~ 232 (355)
T 3vu4_A 153 SNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVR 232 (355)
T ss_dssp EESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEE
T ss_pred eCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 6889999999998743 12 6778899999999999999999999999998 9999999987766
Q ss_pred cee-c-cccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCcc-ceEe---------------------ecCCCCeE
Q psy6213 221 YSI-N-TIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIP-LASF---------------------TEHKDVVS 276 (330)
Q Consensus 221 ~~~-~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~-~~~~---------------------~~~~~~v~ 276 (330)
... . |...|.+++|+|++++ +++++ .|+.|++||++.+... ...+ ..+..+..
T Consensus 233 ~~~~g~h~~~v~~~~~s~~~~~-l~s~s--~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (355)
T 3vu4_A 233 EFRRGLDRADVVDMKWSTDGSK-LAVVS--DKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGC 309 (355)
T ss_dssp EEECTTCCSCEEEEEECTTSCE-EEEEE--TTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCC
T ss_pred EEEcCCCCCcEEEEEECCCCCE-EEEEE--CCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCce
Confidence 655 3 8899999999999997 55555 5999999999765321 1111 01122346
Q ss_pred EEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 277 GLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 277 ~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
.++|++|++.|++++.||.+++|...
T Consensus 310 ~~a~~~d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 310 KIAWISESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp EEEESSSSEEEEEETTTTEEEEEEEE
T ss_pred EEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence 78999999999999999999999743
No 90
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.1e-37 Score=264.41 Aligned_cols=244 Identities=13% Similarity=0.225 Sum_probs=206.6
Q ss_pred CCcccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|.+.|++++|+|+++++++| ||.|++||+.+++....+..+.. .|.+++|+ ++.+++|+.||.|++|
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~-------~v~~~~~~---~~~l~~~~~dg~i~i~ 201 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQA-------RVGCLSWN---RHVLSSGSRSGAIHHH 201 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS-------CEEEEEEE---TTEEEEEETTSEEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCC-------ceEEEEEC---CCEEEEEcCCCCEEEE
Confidence 378999999999999995555 99999999999887776654433 36889995 4799999999999999
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEE
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASV 159 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 159 (330)
|+... ......+..|...|.+++|+| ++.+|++|+.|+.|++||+++++....+..|...|.+++|+|++..+++++
T Consensus 202 d~~~~--~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~ 278 (401)
T 4aez_A 202 DVRIA--NHQIGTLQGHSSEVCGLAWRS-DGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATG 278 (401)
T ss_dssp ETTSS--SCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEE
T ss_pred ecccC--cceeeEEcCCCCCeeEEEEcC-CCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEe
Confidence 99842 456777889999999999999 899999999999999999999999999988999999999999988888887
Q ss_pred e--cCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEe--cCCcEEEEeCCCCccc--cceeccccceEEEE
Q psy6213 160 S--ENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS--RDKTIKVWDLSIKPSL--EYSINTIASVSRIK 233 (330)
Q Consensus 160 ~--~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~--~~~~~~~~~v~~~~ 233 (330)
+ .|+.|++||+++ ......+. +...+.+++|+|+++++++++ .||.|++||+.+++.. .....|...|.+++
T Consensus 279 ~gs~d~~i~i~d~~~-~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~ 356 (401)
T 4aez_A 279 GGTMDKQIHFWNAAT-GARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSA 356 (401)
T ss_dssp CCTTTCEEEEEETTT-CCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEE
T ss_pred cCCCCCEEEEEECCC-CCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEE
Confidence 6 799999999997 55666665 678899999999999999954 8999999999886432 23456788999999
Q ss_pred EcCCCCeEEEEeecccCCeEEEEEccCCCc
Q psy6213 234 WRPQRKFHLASCSLVVDSSVNVWDIRRPYI 263 (330)
Q Consensus 234 ~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~ 263 (330)
|+|++++++ +++ .||.|++||+.+++.
T Consensus 357 ~s~dg~~l~-s~~--~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 357 LSPDGRILS-TAA--SDENLKFWRVYDGDH 383 (401)
T ss_dssp ECTTSSEEE-EEC--TTSEEEEEECCC---
T ss_pred ECCCCCEEE-EEe--CCCcEEEEECCCCcc
Confidence 999999754 444 599999999998875
No 91
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.6e-37 Score=267.03 Aligned_cols=245 Identities=18% Similarity=0.338 Sum_probs=200.1
Q ss_pred cccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCC--------CceeEEecccc------------cceeEEEEEecC
Q psy6213 50 LNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISR--------SKQERVFNDHK------------RTVNKVSFHYVE 109 (330)
Q Consensus 50 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~--------~~~~~~~~~~~------------~~i~~i~~~~~~ 109 (330)
....|++++|+| ++++||+|+.||.|++|++.+... .+....+.+|. ..|.+++|+| +
T Consensus 27 ~~~~V~~v~~s~-~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~-~ 104 (447)
T 3dw8_B 27 EADIISTVEFNH-SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP-Q 104 (447)
T ss_dssp GGGSEEEEEECS-SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC-C
T ss_pred ccCcEEEEEECC-CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC-C
Confidence 345689999999 999999999999999999986321 12466788898 8899999999 5
Q ss_pred C--CEEEEEecCCcEEEEEeecCcee---------------------------------------ee-eecCCCCeEEEE
Q psy6213 110 S--NWLISGSQDGTMRLFDIRCQEST---------------------------------------KI-FHSNTESVRDVE 147 (330)
Q Consensus 110 ~--~~l~~~~~d~~i~i~d~~~~~~~---------------------------------------~~-~~~~~~~v~~~~ 147 (330)
+ .+|++++.|+.|++||+.+++.. .. ..+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 5 79999999999999999875432 12 356889999999
Q ss_pred EcCCCCcEEEEEecCCcEEEEecCCCcccee-------eeccCCCCeEEEEEcCCC-CEEEEEecCCcEEEEeCCCCcc-
Q psy6213 148 FNPHSPYAFASVSENGTIQQWDVRRPEKCFY-------QFTAHSGPIFACDWHPEH-AWLATASRDKTIKVWDLSIKPS- 218 (330)
Q Consensus 148 ~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~-------~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~- 218 (330)
|+|+++ +|+++ .|+.|++||+++...... .+..|...|.+++|+|++ ++|++++.||.|++||+++++.
T Consensus 185 ~~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 185 INSDYE-TYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp ECTTSS-EEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred EcCCCC-EEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 999998 58887 799999999995444444 366899999999999998 9999999999999999998764
Q ss_pred ---ccceecccc------------ceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCC---------
Q psy6213 219 ---LEYSINTIA------------SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDV--------- 274 (330)
Q Consensus 219 ---~~~~~~~~~------------~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~--------- 274 (330)
......+.. .+.+++|+|++++ +++++ . +.|++||++....++..+..|...
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~--~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~ 338 (447)
T 3dw8_B 263 DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY-MMTRD--Y-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYE 338 (447)
T ss_dssp CTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSE-EEEEE--S-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHH
T ss_pred cceeeEeccCCCccccccccccCceEEEEEECCCCCE-EEEee--C-CeEEEEeCCCCccccceeecccccccccccccc
Confidence 333444443 8999999999997 66666 5 999999999744557888888642
Q ss_pred ------eEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 275 ------VSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 275 ------v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
+..++|+|++++|++++.||.|++|+..
T Consensus 339 ~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~ 372 (447)
T 3dw8_B 339 NDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRN 372 (447)
T ss_dssp TSGGGCCCCEEECTTSSEEEEECSTTEEEEEETT
T ss_pred ccccccceEEEECCCCCEEEEeccCCEEEEEEcC
Confidence 3349999999999999999999999865
No 92
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.1e-37 Score=260.87 Aligned_cols=242 Identities=15% Similarity=0.227 Sum_probs=201.0
Q ss_pred CCcccceEEEEeeC----CCeeec-C-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCc
Q psy6213 2 AYLSPVHKHGLKAD----NGLAQP-S-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGA 75 (330)
Q Consensus 2 ~H~~~v~~~~~s~~----~~~~~~-g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 75 (330)
.|.+.|++++|+|+ ++++++ + ||.|++||+.+++....+..+. ..|.+++|+|.++++|++++.||.
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~-------~~i~~~~~~~~~~~~l~s~~~dg~ 139 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHG-------NAINELKFHPRDPNLLLSVSKDHA 139 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCC-------SCEEEEEECSSCTTEEEEEETTSC
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCC-------CcEEEEEECCCCCCEEEEEeCCCe
Confidence 37788999999999 557444 4 9999999999988776655433 347999999977899999999999
Q ss_pred EEEEECCCCCCCceeEEe---cccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeec--------------
Q psy6213 76 VVVWNLGQISRSKQERVF---NDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHS-------------- 138 (330)
Q Consensus 76 i~iw~~~~~~~~~~~~~~---~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------------- 138 (330)
|++||+.+ .+....+ ..|...|.+++|+| ++++|++++.||.|++||+++++....+..
T Consensus 140 i~iwd~~~---~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (366)
T 3k26_A 140 LRLWNIQT---DTLVAIFGGVEGHRDEVLSADYDL-LGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFI 215 (366)
T ss_dssp EEEEETTT---TEEEEEECSTTSCSSCEEEEEECT-TSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCC
T ss_pred EEEEEeec---CeEEEEecccccccCceeEEEECC-CCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCccccc
Confidence 99999987 6666666 68999999999998 899999999999999999988765544433
Q ss_pred --------------CCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCcc-------------ceeeeccCCCCeEEEE
Q psy6213 139 --------------NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEK-------------CFYQFTAHSGPIFACD 191 (330)
Q Consensus 139 --------------~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~-------------~~~~~~~~~~~i~~~~ 191 (330)
|...|.+++|+ ++ ++++++.||.|++||+++... .+..+..|...|.+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~v~~~~~~--~~-~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 292 (366)
T 3k26_A 216 SQKIHFPDFSTRDIHRNYVDCVRWL--GD-LILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMR 292 (366)
T ss_dssp CEEECCCSEEECSSCSSCCCEEEEE--TT-EEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCC
T ss_pred ceeeccCccccccCCcceEEEEEEc--CC-EEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEE
Confidence 88999999999 44 699999999999999987432 3566778889999999
Q ss_pred EcCC--CCEEEEEecCCcEEEEeCCCCcccc----ceecc--ccceEEEEEcCCCCeEEEEeecccCCeEEEEEccC
Q psy6213 192 WHPE--HAWLATASRDKTIKVWDLSIKPSLE----YSINT--IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260 (330)
Q Consensus 192 ~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~----~~~~~--~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~ 260 (330)
|+|+ +++|++++.||.|++||+.+++... ....+ ...|.+++|+|++++++ +++ .||.|++||+.+
T Consensus 293 ~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~-s~~--~dg~i~iwd~~~ 366 (366)
T 3k26_A 293 FSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILI-AVC--DDASIWRWDRLR 366 (366)
T ss_dssp CEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEE-EEE--TTSEEEEEEC--
T ss_pred EcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEE-EEe--CCCEEEEEEecC
Confidence 9999 9999999999999999999875432 33334 68999999999999755 455 599999999853
No 93
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=4.4e-37 Score=259.63 Aligned_cols=234 Identities=10% Similarity=0.080 Sum_probs=176.4
Q ss_pred CCcEEEEEcCCCcEEEEECCCCCCC--ceeEEecccccceeEEEEEe-------cCCCEEEEEecCCcEEEEEeecCcee
Q psy6213 63 EENHIATGATNGAVVVWNLGQISRS--KQERVFNDHKRTVNKVSFHY-------VESNWLISGSQDGTMRLFDIRCQEST 133 (330)
Q Consensus 63 ~~~~l~~~~~dg~i~iw~~~~~~~~--~~~~~~~~~~~~i~~i~~~~-------~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (330)
++.+|++++.|++|++||....... .....+.+|.+.|++++|+| .++++|++|+.|++|++||++++.++
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~ 179 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI 179 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence 6778999999999999998872211 12334678999999999987 36789999999999999999998888
Q ss_pred eeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCcccee------------------------eeccCCCCeEE
Q psy6213 134 KIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFY------------------------QFTAHSGPIFA 189 (330)
Q Consensus 134 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~------------------------~~~~~~~~i~~ 189 (330)
..+..|..++.+++|+|++..+|++++.||+|++||++++..... ...+|...+.+
T Consensus 180 ~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~ 259 (393)
T 4gq1_A 180 LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLAN 259 (393)
T ss_dssp EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSE
T ss_pred eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccccee
Confidence 888889999999999999876899999999999999987432111 12356778889
Q ss_pred EEEc-CCCCEEEEEecCCcEEEEeCCCCccccceeccccceEE-------------------EEEcCCCCeEEEEeeccc
Q psy6213 190 CDWH-PEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSR-------------------IKWRPQRKFHLASCSLVV 249 (330)
Q Consensus 190 ~~~~-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~l~~~~~~~~ 249 (330)
+.|+ |+++.+++++.|+.+++||+...+.......+...+.. +.+.+.+..++++++ .
T Consensus 260 v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs--~ 337 (393)
T 4gq1_A 260 VRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHS--Q 337 (393)
T ss_dssp EEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEET--T
T ss_pred eeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEEC--C
Confidence 9987 79999999999999999999876543333332222222 223333455677777 7
Q ss_pred CCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeee
Q psy6213 250 DSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAK 300 (330)
Q Consensus 250 ~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~ 300 (330)
||.|++||+.++.. ......|..+|.+++|+|||++||+++.+| +.+|+
T Consensus 338 Dg~V~lwd~~~~~~-~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvr 386 (393)
T 4gq1_A 338 HGLIQLINTYEKDS-NSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTR 386 (393)
T ss_dssp TTEEEEEETTCTTC-CEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEE
T ss_pred CCEEEEEECCCCcE-EEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEE
Confidence 99999999998876 667778889999999999999999998777 55554
No 94
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.8e-36 Score=256.52 Aligned_cols=243 Identities=12% Similarity=0.141 Sum_probs=206.0
Q ss_pred cccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCC---CceeEEecccccceeEEEEEecC----C---CEEEEEecC
Q psy6213 50 LNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISR---SKQERVFNDHKRTVNKVSFHYVE----S---NWLISGSQD 119 (330)
Q Consensus 50 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~---~~~~~~~~~~~~~i~~i~~~~~~----~---~~l~~~~~d 119 (330)
+...|++++|+| ++|++|+.||.|++|++..... ......+..|...|.+++|+| + + ++|++++.|
T Consensus 15 h~~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~~g~~~~~l~s~~~d 90 (397)
T 1sq9_A 15 HDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQ-AIERDAFELCLVATTSFS 90 (397)
T ss_dssp SSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEE-EEETTTEEEEEEEEEETT
T ss_pred hhcCeEEEEecC---CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEec-ccccCCccccEEEEEcCC
Confidence 445589999987 7999999999999999987220 125777889999999999998 6 8 899999999
Q ss_pred CcEEEEEeecCce-----eeeeecC-----CCCeEEEEEc----CCCCcEEEEEecCCcEEEEecCC------Ccccee-
Q psy6213 120 GTMRLFDIRCQES-----TKIFHSN-----TESVRDVEFN----PHSPYAFASVSENGTIQQWDVRR------PEKCFY- 178 (330)
Q Consensus 120 ~~i~i~d~~~~~~-----~~~~~~~-----~~~v~~~~~~----~~~~~~~~~~~~dg~i~i~d~~~------~~~~~~- 178 (330)
|.|++||+.+++. ...+..| ...|.+++|+ |+++.++++++.||.|++||+++ .. .+.
T Consensus 91 g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~ 169 (397)
T 1sq9_A 91 GDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSL-TLNW 169 (397)
T ss_dssp SCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHT-TTCC
T ss_pred CCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccc-eeec
Confidence 9999999999887 7888878 5899999999 99983289999999999999987 33 233
Q ss_pred ----ee-------ccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceec---c---ccceEEEEEcCCCCeE
Q psy6213 179 ----QF-------TAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSIN---T---IASVSRIKWRPQRKFH 241 (330)
Q Consensus 179 ----~~-------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~l 241 (330)
.+ ..|...|.+++|+|++ +|++++.||.|++||+++.+....... | ...+.+++|+|+++++
T Consensus 170 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l 248 (397)
T 1sq9_A 170 SPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLL 248 (397)
T ss_dssp CCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEE
T ss_pred cCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEE
Confidence 44 4488899999999999 999999999999999998866666655 6 8899999999999975
Q ss_pred EEEeecccC---CeEEEEEccCCCccceEeec-------------CCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 242 LASCSLVVD---SSVNVWDIRRPYIPLASFTE-------------HKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 242 ~~~~~~~~~---~~i~i~d~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
++++ .| +.|++||+++++. +..+.. |...|.+++|+|++++|++++.||.|++|+..
T Consensus 249 ~~~~---~d~~~g~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 321 (397)
T 1sq9_A 249 AIAH---DSNSFGCITLYETEFGER-IGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVK 321 (397)
T ss_dssp EEEE---EETTEEEEEEEETTTCCE-EEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred EEEe---cCCCCceEEEEECCCCcc-cceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 5555 48 9999999998865 777877 99999999999999999999999999999864
No 95
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.4e-37 Score=253.55 Aligned_cols=267 Identities=13% Similarity=0.111 Sum_probs=204.1
Q ss_pred EeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCC-----
Q psy6213 12 LKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQI----- 84 (330)
Q Consensus 12 ~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~----- 84 (330)
+.+++.++++| ||.|++||+++++....+. ...|.++.|+| . +++++.|+.|++|+....
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~---------~~~v~~~~~~~-~---~~s~s~D~~i~~w~~~~~~~~~~ 110 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTIT---------TPNPRTGGEHP-A---IISRGPCNRLLLLYPGNQITILD 110 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEE---------EECCCTTCCCC-S---EEEECSTTEEEEEETTTEEEEEE
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEe---------cCCceeeeeCC-c---eEEecCCCeEEEEEccCceEEee
Confidence 44567775544 9999999999988776654 12257888998 5 999999999999987631
Q ss_pred -CCCceeEEe-cccccceeEEEEEe-cCCCEEEEEecCCcEEEEEeecCceeeeeec-CCCCeEEEEEcCCCCcEEEEEe
Q psy6213 85 -SRSKQERVF-NDHKRTVNKVSFHY-VESNWLISGSQDGTMRLFDIRCQESTKIFHS-NTESVRDVEFNPHSPYAFASVS 160 (330)
Q Consensus 85 -~~~~~~~~~-~~~~~~i~~i~~~~-~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~ 160 (330)
...+.+..+ ..|...|.+++|+| .+++++++++.||.|++||+++++....... +...+.+++|+|++. ++++|+
T Consensus 111 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~-~lasg~ 189 (343)
T 3lrv_A 111 SKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSL-LLALYS 189 (343)
T ss_dssp TTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSC-EEEEEC
T ss_pred cCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCC-EEEEEc
Confidence 112323333 36678899999997 2578999999999999999999988766643 455799999999998 699999
Q ss_pred cCCcEEEEecCCCccceeeecc-CCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceec---cccce--EEEEE
Q psy6213 161 ENGTIQQWDVRRPEKCFYQFTA-HSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSIN---TIASV--SRIKW 234 (330)
Q Consensus 161 ~dg~i~i~d~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~v--~~~~~ 234 (330)
.||.|++||++++......+.. |.++|.+++|+|++.+|++++ |+.|++||+++.+....... +...+ .+++|
T Consensus 190 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (343)
T 3lrv_A 190 PDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDI 268 (343)
T ss_dssp TTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEE
T ss_pred CCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEE
Confidence 9999999999985444367777 999999999999999999999 55999999998865433222 22233 46999
Q ss_pred cCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEec---CCCEEEEeecCCeEeeee
Q psy6213 235 RPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRG---DPQLFIASSRVSIIPRAK 300 (330)
Q Consensus 235 ~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~s~~~dg~i~iw~ 300 (330)
+|++++++++++ .++.+++|++.+...... . .++..++|.| +...+++++.||.+.++-
T Consensus 269 ~~~g~~l~~~s~--~d~~i~v~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~ 330 (343)
T 3lrv_A 269 DDSGKNMIAYSN--ESNSLTIYKFDKKTKNWT-K----DEESALCLQSDTADFTDMDVVCGDGGIAAIL 330 (343)
T ss_dssp CTTSSEEEEEET--TTTEEEEEEECTTTCSEE-E----EEEEECCC----CCCCEEEEEEETTEEEEEE
T ss_pred CCCCCEEEEecC--CCCcEEEEEEcccccceE-e----cCceeEecCccccccceeEEEecCCceEEEE
Confidence 999998555443 399999999976654222 2 5678889998 889999999999999874
No 96
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1e-36 Score=258.50 Aligned_cols=246 Identities=20% Similarity=0.246 Sum_probs=204.1
Q ss_pred eeeeeecccCCcEEEEEcCCCcEEEEECCCCCCC-ceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecC--
Q psy6213 54 CNDVAWSCIEENHIATGATNGAVVVWNLGQISRS-KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQ-- 130 (330)
Q Consensus 54 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~-- 130 (330)
...++++|+...++++++.||.|++|++....+. .....+.+|...|.+++|+|.++++|++|+.||.|++||+.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence 4568888833344556789999999999663221 3455677899999999999867899999999999999999987
Q ss_pred -----ceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeee--ccCCCCeEEEEEcCCCCEEEEEe
Q psy6213 131 -----ESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQF--TAHSGPIFACDWHPEHAWLATAS 203 (330)
Q Consensus 131 -----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~ 203 (330)
+.+..+.+|...|.+++|+|+++.++++++.||.|++||+++ .+....+ ..|...|.+++|+|++++|++++
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 195 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT-GAAVLTLGPDVHPDTIYSVDWSRDGALICTSC 195 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTT-TEEEEEECTTTCCSCEEEEEECTTSSCEEEEE
T ss_pred ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCC-CCccEEEecCCCCCceEEEEECCCCCEEEEEe
Confidence 567888899999999999999865899999999999999998 5667777 78999999999999999999999
Q ss_pred cCCcEEEEeCCCCccccce-eccccc-eEEEEEcCCCCeEEEEe--ecccCCeEEEEEccCCCccceEee-cCCCCeEEE
Q psy6213 204 RDKTIKVWDLSIKPSLEYS-INTIAS-VSRIKWRPQRKFHLASC--SLVVDSSVNVWDIRRPYIPLASFT-EHKDVVSGL 278 (330)
Q Consensus 204 ~dg~i~i~d~~~~~~~~~~-~~~~~~-v~~~~~~~~~~~l~~~~--~~~~~~~i~i~d~~~~~~~~~~~~-~~~~~v~~~ 278 (330)
.||.|++||+++++..... ..+... +.++.|+|++.+++++. + .++.|++||+++...+..... .|...+.++
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 273 (402)
T 2aq5_A 196 RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRM--SERQVALWDTKHLEEPLSLQELDTSSGVLLP 273 (402)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTT--CCEEEEEEETTBCSSCSEEEECCCCSSCEEE
T ss_pred cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCC--CCceEEEEcCccccCCceEEeccCCCceeEE
Confidence 9999999999988665555 455544 89999999998644442 3 599999999998776454443 577889999
Q ss_pred EEecCCCEEEE-eecCCeEeeeecc
Q psy6213 279 AWRGDPQLFIA-SSRVSIIPRAKNI 302 (330)
Q Consensus 279 ~~~~~~~~l~s-~~~dg~i~iw~~~ 302 (330)
+|+|++++|++ ++.||.|++|+..
T Consensus 274 ~~s~~~~~l~~~g~~dg~i~i~d~~ 298 (402)
T 2aq5_A 274 FFDPDTNIVYLCGKGDSSIRYFEIT 298 (402)
T ss_dssp EEETTTTEEEEEETTCSCEEEEEEC
T ss_pred EEcCCCCEEEEEEcCCCeEEEEEec
Confidence 99999999975 4579999999864
No 97
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.3e-36 Score=272.36 Aligned_cols=246 Identities=23% Similarity=0.305 Sum_probs=208.1
Q ss_pred ccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCC--CceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEE
Q psy6213 49 NLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISR--SKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126 (330)
Q Consensus 49 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d 126 (330)
.+...|++++|+|+++++|++|+.|+.|++|++..... ......+.+|...|.+++|+| ++++|++|+.|+.|++||
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-~g~~l~sgs~Dg~v~vwd 458 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSS-DGQFALSGSWDGELRLWD 458 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEE
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECC-CCCEEEEEeCCCcEEEEE
Confidence 44556899999995678999999999999999976322 234567889999999999998 899999999999999999
Q ss_pred eecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccce--eeeccCCCCeEEEEEcCCC--CEEEEE
Q psy6213 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCF--YQFTAHSGPIFACDWHPEH--AWLATA 202 (330)
Q Consensus 127 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~--~~~~~~~~~i~~~~~~~~~--~~l~~~ 202 (330)
+.+++....+.+|...|.+++|+|+++ .+++++.|++|++||........ ....+|...|.+++|+|++ ..++++
T Consensus 459 ~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~ 537 (694)
T 3dm0_A 459 LAAGVSTRRFVGHTKDVLSVAFSLDNR-QIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSA 537 (694)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEE
T ss_pred CCCCcceeEEeCCCCCEEEEEEeCCCC-EEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEE
Confidence 999999999999999999999999998 59999999999999987522111 1224688899999999986 689999
Q ss_pred ecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEec
Q psy6213 203 SRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRG 282 (330)
Q Consensus 203 ~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~ 282 (330)
+.|+.|++||+++.+.......|...|.+++|+|++++ +++++ .|+.|++||+++++. +..+. +...|.+++|+|
T Consensus 538 s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~-l~sg~--~Dg~i~iwd~~~~~~-~~~~~-~~~~v~~~~~sp 612 (694)
T 3dm0_A 538 SWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSL-CASGG--KDGVVLLWDLAEGKK-LYSLE-ANSVIHALCFSP 612 (694)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSE-EEEEE--TTSBCEEEETTTTEE-EECCB-CSSCEEEEEECS
T ss_pred eCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCE-EEEEe--CCCeEEEEECCCCce-EEEec-CCCcEEEEEEcC
Confidence 99999999999988777777788999999999999997 55555 699999999998865 55554 456799999999
Q ss_pred CCCEEEEeecCCeEeeeecc
Q psy6213 283 DPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 283 ~~~~l~s~~~dg~i~iw~~~ 302 (330)
++.+|++++ |+.|++|+..
T Consensus 613 ~~~~l~~~~-~~~i~iwd~~ 631 (694)
T 3dm0_A 613 NRYWLCAAT-EHGIKIWDLE 631 (694)
T ss_dssp SSSEEEEEE-TTEEEEEETT
T ss_pred CCcEEEEEc-CCCEEEEECC
Confidence 998887665 5669999864
No 98
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-37 Score=262.03 Aligned_cols=260 Identities=11% Similarity=0.021 Sum_probs=202.9
Q ss_pred CcccceEEEEeeCCCe-eecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEE
Q psy6213 3 YLSPVHKHGLKADNGL-AQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWN 80 (330)
Q Consensus 3 H~~~v~~~~~s~~~~~-~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~ 80 (330)
-...|.+++|+|||++ ++++ |++|+ |...++. +.. +...|.+++|+| ++ .++.+.+|+
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~---l~g-------h~~~v~~V~FsP-dg-------~~~~~~~~~ 73 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKD---INC-------NSKNLFHVKEFP-LE-------FENKLDFEL 73 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSC---CSS-------BGGGTEEEEEEC-CC-------CCCTTTTSC
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--cccccce---ecC-------CCccEEEEEECC-CC-------CcceEEEEe
Confidence 3578999999999999 5555 99999 6544432 222 334469999999 76 456655555
Q ss_pred CCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCC-----CeEEEEEcCCCCcE
Q psy6213 81 LGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTE-----SVRDVEFNPHSPYA 155 (330)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~ 155 (330)
.+. .....+ .|...|.+++|+| ++.+||+++.||.|++||.++ .+..+. |.. .+.+++|+|+|+ +
T Consensus 74 ~~~----~~~~~~-~~~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~-~ 143 (588)
T 2j04_A 74 AQQ----NGLLNS-QPVCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIES-S 143 (588)
T ss_dssp CCS----SCSSTT-SCSCCEEEEEECS-SSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSS-C
T ss_pred CCC----ceEeec-CCCCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCC-E
Confidence 432 222222 4578999999999 999999999999999999543 555566 554 499999999999 5
Q ss_pred EEEEecCCcEEEEecCCCcc------ceeee----ccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccc---cce
Q psy6213 156 FASVSENGTIQQWDVRRPEK------CFYQF----TAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSL---EYS 222 (330)
Q Consensus 156 ~~~~~~dg~i~i~d~~~~~~------~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~ 222 (330)
|++|+.||+|++||+..+.. .+..+ .+|...|.+++|+|+| +++++.|+.+++||+...... ...
T Consensus 144 LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL 221 (588)
T 2j04_A 144 IVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMI 221 (588)
T ss_dssp EEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEE
T ss_pred EEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeee
Confidence 99999999999999987421 24555 6677899999999999 888999999999999887532 122
Q ss_pred -eccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEE--ecCCCEEEEeecCCeEeee
Q psy6213 223 -INTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAW--RGDPQLFIASSRVSIIPRA 299 (330)
Q Consensus 223 -~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~s~~~dg~i~iw 299 (330)
..|...|.+++|+ ++. +++++ ++.|++||+.+++. .....+|.+.|.+++| +||+..|+++++||+ ++|
T Consensus 222 ~~~h~~~V~svaFs--g~~-LASa~---~~tIkLWd~~~~~~-~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw 293 (588)
T 2j04_A 222 QNASRRKITDLKIV--DYK-VVLTC---PGYVHKIDLKNYSI-SSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVL 293 (588)
T ss_dssp ECCCSSCCCCEEEE--TTE-EEEEC---SSEEEEEETTTTEE-EEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEE
T ss_pred cccccCcEEEEEEE--CCE-EEEEe---CCeEEEEECCCCeE-EEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEE
Confidence 2567889999999 564 66666 79999999998764 2333389999999999 999999999999999 999
Q ss_pred ecc
Q psy6213 300 KNI 302 (330)
Q Consensus 300 ~~~ 302 (330)
...
T Consensus 294 ~~d 296 (588)
T 2j04_A 294 LED 296 (588)
T ss_dssp ESS
T ss_pred eec
Confidence 754
No 99
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-35 Score=247.25 Aligned_cols=241 Identities=15% Similarity=0.286 Sum_probs=209.5
Q ss_pred cccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeec
Q psy6213 50 LNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC 129 (330)
Q Consensus 50 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~ 129 (330)
+...|++++|+| ++++|++++.||.|++||+.+ .+....+..|...|.+++|+| ++++|++++.||.|++||+++
T Consensus 31 h~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~---~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~i~iwd~~~ 105 (369)
T 3zwl_B 31 HERPLTQVKYNK-EGDLLFSCSKDSSASVWYSLN---GERLGTLDGHTGTIWSIDVDC-FTKYCVTGSADYSIKLWDVSN 105 (369)
T ss_dssp CSSCEEEEEECT-TSCEEEEEESSSCEEEEETTT---CCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTT
T ss_pred eeceEEEEEEcC-CCCEEEEEeCCCEEEEEeCCC---chhhhhhhhcCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCC
Confidence 344589999999 999999999999999999988 788888999999999999998 899999999999999999999
Q ss_pred CceeeeeecCCCCeEEEEEcCCCCcEEEEEecC-----CcEEEEecCCCcc----------ceeeeccCCC--CeEEEEE
Q psy6213 130 QESTKIFHSNTESVRDVEFNPHSPYAFASVSEN-----GTIQQWDVRRPEK----------CFYQFTAHSG--PIFACDW 192 (330)
Q Consensus 130 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-----g~i~i~d~~~~~~----------~~~~~~~~~~--~i~~~~~ 192 (330)
++.+..+. +...+.+++|+|+++ .+++++.+ |.|++||++.... ....+..|.. .+.+++|
T Consensus 106 ~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (369)
T 3zwl_B 106 GQCVATWK-SPVPVKRVEFSPCGN-YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGW 183 (369)
T ss_dssp CCEEEEEE-CSSCEEEEEECTTSS-EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEE
T ss_pred CcEEEEee-cCCCeEEEEEccCCC-EEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEE
Confidence 99988888 888999999999999 58888888 9999999986432 3344455655 8999999
Q ss_pred cCCCCEEEEEecCCcEEEEeCCC-CccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecC
Q psy6213 193 HPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEH 271 (330)
Q Consensus 193 ~~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~ 271 (330)
+|++++|++++.||.|++||+++ .+.......+...+.+++|+|+++++++++ .|+.|++||+++++. ...+. +
T Consensus 184 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~---~d~~i~v~d~~~~~~-~~~~~-~ 258 (369)
T 3zwl_B 184 STKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSS---RDTNSFLVDVSTLQV-LKKYE-T 258 (369)
T ss_dssp CGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEE---TTSEEEEEETTTCCE-EEEEE-C
T ss_pred cCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEec---CCceEEEEECCCCce-eeeec-C
Confidence 99999999999999999999998 445556666889999999999999755554 599999999998875 55554 7
Q ss_pred CCCeEEEEEecCCCEEEEeecCC--------------eEeeeecc
Q psy6213 272 KDVVSGLAWRGDPQLFIASSRVS--------------IIPRAKNI 302 (330)
Q Consensus 272 ~~~v~~~~~~~~~~~l~s~~~dg--------------~i~iw~~~ 302 (330)
...+..++|+|+++++++++.++ .+++|+..
T Consensus 259 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 303 (369)
T 3zwl_B 259 DCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKI 303 (369)
T ss_dssp SSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETT
T ss_pred CCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecC
Confidence 78999999999999999999998 78888753
No 100
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.8e-36 Score=252.78 Aligned_cols=243 Identities=16% Similarity=0.312 Sum_probs=200.2
Q ss_pred cccceeeeeecccCC-cEEEEEcC---CCcEEEEECCCCCCCceeEE-ecccccceeEEEEEecC--CCEEEEEecCCcE
Q psy6213 50 LNFSCNDVAWSCIEE-NHIATGAT---NGAVVVWNLGQISRSKQERV-FNDHKRTVNKVSFHYVE--SNWLISGSQDGTM 122 (330)
Q Consensus 50 ~~~~v~~~~~~~~~~-~~l~~~~~---dg~i~iw~~~~~~~~~~~~~-~~~~~~~i~~i~~~~~~--~~~l~~~~~d~~i 122 (330)
+...|.+++|+| ++ .++++|+. ||.|++||+.+ .+.... ...|...|.+++|+|.. +.+|++|+.||.|
T Consensus 17 h~~~v~~~~~~p-~~~~l~~~~s~~~~d~~v~iw~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i 92 (357)
T 3i2n_A 17 FNYTVFDCKWVP-CSAKFVTMGNFARGTGVIQLYEIQH---GDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNL 92 (357)
T ss_dssp CSSCEEEEEECT-TSSEEEEEEC--CCCEEEEEEEECS---SSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCE
T ss_pred CCCceEEEEEcC-CCceEEEecCccCCCcEEEEEeCCC---CcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeE
Confidence 345589999999 66 55567766 89999999987 333322 33789999999999832 6999999999999
Q ss_pred EEEEeecCc-eeeeeecCCCCeEEEEE------cCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCC----CeEEEE
Q psy6213 123 RLFDIRCQE-STKIFHSNTESVRDVEF------NPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSG----PIFACD 191 (330)
Q Consensus 123 ~i~d~~~~~-~~~~~~~~~~~v~~~~~------~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~----~i~~~~ 191 (330)
++||+.+++ .+..+..|...|.++.| +|+++ .+++++.||.|++||+++...+...+..|.+ .+.+++
T Consensus 93 ~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~ 171 (357)
T 3i2n_A 93 HIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAP-EIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVA 171 (357)
T ss_dssp EEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCC-EEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEE
T ss_pred EEEeCCCCCccEEEEEecccceEEEeeccccccCCCcc-EEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEE
Confidence 999999888 88889999999999955 67887 6999999999999999986556777766554 788888
Q ss_pred ----EcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcC---CCCeEEEEeecccCCeEEEEEccCCCcc
Q psy6213 192 ----WHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRP---QRKFHLASCSLVVDSSVNVWDIRRPYIP 264 (330)
Q Consensus 192 ----~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~~~l~~~~~~~~~~~i~i~d~~~~~~~ 264 (330)
|+|++++|++++.||.|++||+++++. .....+...+.+++|+| ++.+++++ + .||.|++||++++..
T Consensus 172 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~-~--~dg~i~i~d~~~~~~- 246 (357)
T 3i2n_A 172 FGNAYNQEERVVCAGYDNGDIKLFDLRNMAL-RWETNIKNGVCSLEFDRKDISMNKLVAT-S--LEGKFHVFDMRTQHP- 246 (357)
T ss_dssp EECCCC-CCCEEEEEETTSEEEEEETTTTEE-EEEEECSSCEEEEEESCSSSSCCEEEEE-E--STTEEEEEEEEEEET-
T ss_pred EEeccCCCCCEEEEEccCCeEEEEECccCce-eeecCCCCceEEEEcCCCCCCCCEEEEE-C--CCCeEEEEeCcCCCc-
Confidence 788999999999999999999998854 44566788999999999 88875555 4 599999999987654
Q ss_pred ceEe-----ecCCCCeEEEEEecCCC-EEEEeecCCeEeeeecc
Q psy6213 265 LASF-----TEHKDVVSGLAWRGDPQ-LFIASSRVSIIPRAKNI 302 (330)
Q Consensus 265 ~~~~-----~~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iw~~~ 302 (330)
...+ .+|...|.+++|+|+++ +|++++.||.|++|+..
T Consensus 247 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 247 TKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp TTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred ccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence 3333 38999999999999998 89999999999999864
No 101
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.8e-36 Score=254.25 Aligned_cols=239 Identities=15% Similarity=0.217 Sum_probs=196.1
Q ss_pred cccceeeeeecccCC-cEEEEEcCCCcEEEEECCCCCCCceeEEe--cccccceeEEEEEecCCCEEEEEecCCcEEEEE
Q psy6213 50 LNFSCNDVAWSCIEE-NHIATGATNGAVVVWNLGQISRSKQERVF--NDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126 (330)
Q Consensus 50 ~~~~v~~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~--~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d 126 (330)
+...|.+++|+| ++ ++|++|+.||.|++||+.+ ......+ .+|...|.+++|+|.++++|++++.|+.|++||
T Consensus 72 h~~~v~~~~~~~-~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 147 (383)
T 3ei3_B 72 FDRRVTSLEWHP-THPTTVAVGSKGGDIILWDYDV---QNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRD 147 (383)
T ss_dssp CSSCEEEEEECS-SCTTEEEEEEBTSCEEEEETTS---TTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEE
T ss_pred CCCCEEEEEECC-CCCCEEEEEcCCCeEEEEeCCC---cccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEE
Confidence 345589999999 76 9999999999999999987 4444444 369999999999986679999999999999999
Q ss_pred eecCceeeeeecC---CCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCC-EEEEE
Q psy6213 127 IRCQESTKIFHSN---TESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHA-WLATA 202 (330)
Q Consensus 127 ~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~ 202 (330)
+++ +....+..+ ...|.+++|+|+++ .+++++.||.|++||++ ...+..+..|...|.+++|+|+++ +|+++
T Consensus 148 ~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~--~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 223 (383)
T 3ei3_B 148 FSG-SVIQVFAKTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLD--GHEIFKEKLHKAKVTHAEFNPRCDWLMATS 223 (383)
T ss_dssp TTS-CEEEEEECCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETT--SCEEEEEECSSSCEEEEEECSSCTTEEEEE
T ss_pred CCC-CceEEEeccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECC--CCEEEEeccCCCcEEEEEECCCCCCEEEEE
Confidence 985 455555443 47899999999998 69999999999999995 567788889999999999999998 99999
Q ss_pred ecCCcEEEEeCCCCc---cccceeccccceEEEEEcC-CCCeEEEEeecccCCeEEEEEccCCCccceEeecCC------
Q psy6213 203 SRDKTIKVWDLSIKP---SLEYSINTIASVSRIKWRP-QRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHK------ 272 (330)
Q Consensus 203 ~~dg~i~i~d~~~~~---~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~------ 272 (330)
+.|+.|++||+++.+ .......+...+.+++|+| ++.+++ +++ .|+.|++||++++.. ...+..|.
T Consensus 224 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~-~~~--~d~~i~iwd~~~~~~-~~~~~~~~~~~~~~ 299 (383)
T 3ei3_B 224 SVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLL-TTD--QRNEIRVYSSYDWSK-PDQIIIHPHRQFQH 299 (383)
T ss_dssp ETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEE-EEE--SSSEEEEEETTBTTS-CSEEEECCBCCCTT
T ss_pred eCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEE-EEc--CCCcEEEEECCCCcc-cccccccccccccc
Confidence 999999999998742 2333446889999999999 999755 444 599999999998765 44444332
Q ss_pred -----------CCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 273 -----------DVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 273 -----------~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
..+..++|+|++++ +++.||.|++|+..
T Consensus 300 ~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~ 338 (383)
T 3ei3_B 300 LTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDAN 338 (383)
T ss_dssp SCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETT
T ss_pred ccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecC
Confidence 34455677777776 78899999999854
No 102
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.4e-35 Score=252.79 Aligned_cols=255 Identities=12% Similarity=0.247 Sum_probs=206.0
Q ss_pred CCcccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|.+.|++++|+|+|+++++| ||.|+|||+++++....+..|... +.+++| ++..|++|+.|+.+++|
T Consensus 145 ~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~-------v~~~s~---~~~~l~sgs~d~~i~~~ 214 (420)
T 4gga_A 145 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSAR-------VGSLSW---NSYILSSGSRSGHIHHH 214 (420)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC-------EEEEEE---ETTEEEEEETTSEEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCc-------eEEEee---CCCEEEEEeCCCceeEe
Confidence 477889999999999996665 999999999999887776655432 466666 46899999999999999
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCce----eeeeecCCCCeEEEEEcCCCCcE
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQES----TKIFHSNTESVRDVEFNPHSPYA 155 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~ 155 (330)
|.... ......+.+|...+..+.|+| ++.++++++.|+.+++||..+++. +.....|...|.+++|+|.+..+
T Consensus 215 d~~~~--~~~~~~~~~h~~~~~~~~~~~-~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~ 291 (420)
T 4gga_A 215 DVRVA--EHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNV 291 (420)
T ss_dssp ETTSS--SCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTE
T ss_pred eeccc--ceeeEEecccccceeeeeecC-CCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccE
Confidence 98763 456677889999999999998 899999999999999999987653 45566788999999999998887
Q ss_pred EEEE--ecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEe--cCCcEEEEeCCCCccccceeccccceEE
Q psy6213 156 FASV--SENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS--RDKTIKVWDLSIKPSLEYSINTIASVSR 231 (330)
Q Consensus 156 ~~~~--~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~ 231 (330)
++++ +.|+.|++||+++ +.....+.. ...+.++.|+|+++.+++++ .|+.|++||+.+++.+.....|...|.+
T Consensus 292 la~~~gs~D~~I~iwd~~t-~~~~~~~~~-~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~ 369 (420)
T 4gga_A 292 LATGGGTSDRHIRIWNVCS-GACLSAVDA-HSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLS 369 (420)
T ss_dssp EEEEECTTTCEEEEEETTT-TEEEEEEEC-SSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEEEeecCCCEEEEEeCCc-cccceeecc-ccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEE
Confidence 7764 4799999999998 556666654 46789999999999888776 7899999999999888778889999999
Q ss_pred EEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCe
Q psy6213 232 IKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVV 275 (330)
Q Consensus 232 ~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v 275 (330)
++|+|+|++ +++++ .|++|++||+..... ......+...+
T Consensus 370 l~~spdg~~-l~S~s--~D~tvriWdv~~~~~-~~~~~~~~~~~ 409 (420)
T 4gga_A 370 LTMSPDGAT-VASAA--ADETLRLWRCFELDP-ARRREREKASA 409 (420)
T ss_dssp EEECTTSSC-EEEEE--TTTEEEEECCSCSSC-C----------
T ss_pred EEEcCCCCE-EEEEe--cCCeEEEEECCCCCc-cchhhhccCCc
Confidence 999999997 55555 699999999976543 44444444333
No 103
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.5e-36 Score=259.99 Aligned_cols=244 Identities=18% Similarity=0.263 Sum_probs=192.7
Q ss_pred ccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecC
Q psy6213 51 NFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQ 130 (330)
Q Consensus 51 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (330)
...|++++|+|.++++||+|+.||.|+|||+.... ......+.+|.+.|++++|+|.++++|++|+.||+|++||++++
T Consensus 119 ~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~-~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~ 197 (435)
T 4e54_B 119 DRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKD-KPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGN 197 (435)
T ss_dssp SSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCS-CCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSC
T ss_pred CCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCC-ceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCC
Confidence 34589999999667899999999999999998632 33444567899999999999878899999999999999999865
Q ss_pred ceeeeeec--CCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCC-EEEEEecCCc
Q psy6213 131 ESTKIFHS--NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHA-WLATASRDKT 207 (330)
Q Consensus 131 ~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~ 207 (330)
........ +...+.+++|+|++. +|++|+.||.|++||++. +.+..+.+|...|.+++|+|++. +|++++.|+.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~dg~i~~wd~~~--~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~ 274 (435)
T 4e54_B 198 ILRVFASSDTINIWFCSLDVSASSR-MVVTGDNVGNVILLNMDG--KELWNLRMHKKKVTHVALNPCCDWFLATASVDQT 274 (435)
T ss_dssp EEEEEECCSSCSCCCCCEEEETTTT-EEEEECSSSBEEEEESSS--CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSB
T ss_pred ceeEEeccCCCCccEEEEEECCCCC-EEEEEeCCCcEeeeccCc--ceeEEEecccceEEeeeecCCCceEEEEecCcce
Confidence 44333322 334678999999998 699999999999999974 45678889999999999999876 7889999999
Q ss_pred EEEEeCCCCccc---cceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCC------CeEEE
Q psy6213 208 IKVWDLSIKPSL---EYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKD------VVSGL 278 (330)
Q Consensus 208 i~i~d~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~------~v~~~ 278 (330)
|++||+++.+.. .....|...|.+++|+|++++|+ +++ .|+.|++||+.++.. ...+..|.. .+...
T Consensus 275 v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~-s~~--~D~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~ 350 (435)
T 4e54_B 275 VKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLL-TTD--QKSEIRVYSASQWDC-PLGLIPHPHRHFQHLTPIKA 350 (435)
T ss_dssp CCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEE-EEE--SSSCEEEEESSSSSS-EEEECCCCCCCCSSSCCCBC
T ss_pred eeEEecccccccceEEEeeeccccccceeECCCCCeeE-EEc--CCCEEEEEECCCCcc-ceEEecccccccccceeEEE
Confidence 999999876543 33356788999999999999855 455 599999999998876 444444432 23445
Q ss_pred EEecCCCEEEEee------------cCCeEeeeecc
Q psy6213 279 AWRGDPQLFIASS------------RVSIIPRAKNI 302 (330)
Q Consensus 279 ~~~~~~~~l~s~~------------~dg~i~iw~~~ 302 (330)
.|+|++..+++++ .++.|++|+..
T Consensus 351 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~ 386 (435)
T 4e54_B 351 AWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGN 386 (435)
T ss_dssp EECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSS
T ss_pred EEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECC
Confidence 6777777766654 23578899753
No 104
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=6.5e-36 Score=248.00 Aligned_cols=241 Identities=12% Similarity=0.096 Sum_probs=202.8
Q ss_pred ccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCC-EEEEEecCCcEEEEEe-e
Q psy6213 51 NFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESN-WLISGSQDGTMRLFDI-R 128 (330)
Q Consensus 51 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~-~l~~~~~d~~i~i~d~-~ 128 (330)
...|.+++|+| ++++|++++.||.|++|++...........+..|...|.+++|+| +++ +|++|+.||.|++||+ .
T Consensus 11 ~~~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 11 KDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFID-NTDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp SSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEE-SSSEEEEEEETTSCEEEECSSS
T ss_pred CCcEEEEEEcC-CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECC-CCCcEEEEEcCCCeEEEEEecc
Confidence 44579999999 999999999999999999987432234555668999999999999 789 9999999999999999 7
Q ss_pred cCceeeeeec--CCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCC--------ccceeeeccCCCCeEEEEEcCCCCE
Q psy6213 129 CQESTKIFHS--NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRP--------EKCFYQFTAHSGPIFACDWHPEHAW 198 (330)
Q Consensus 129 ~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~ 198 (330)
+++. ..+.. |...|.+++|+| +. .+++++.|+.|++||+++. .+++..+. |...+.+++|+|++
T Consensus 89 ~~~~-~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~-- 162 (342)
T 1yfq_A 89 SPSF-QALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR-- 162 (342)
T ss_dssp SSSE-EECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--
T ss_pred CCce-EeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--
Confidence 6654 67777 999999999999 66 6999999999999999851 23444555 88999999999887
Q ss_pred EEEEecCCcEEEEeCCC-Ccc--ccceeccccceEEEEEcC-CCCeEEEEeecccCCeEEEEEccCC-----CccceEee
Q psy6213 199 LATASRDKTIKVWDLSI-KPS--LEYSINTIASVSRIKWRP-QRKFHLASCSLVVDSSVNVWDIRRP-----YIPLASFT 269 (330)
Q Consensus 199 l~~~~~dg~i~i~d~~~-~~~--~~~~~~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~i~i~d~~~~-----~~~~~~~~ 269 (330)
+++++.|+.|++||++. ... ......+...+.+++|+| +++++ ++++ .+|.+++|+++.. ..+...+.
T Consensus 163 l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l-~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~ 239 (342)
T 1yfq_A 163 LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGY-ACSS--IDGRVAVEFFDDQGDDYNSSKRFAFR 239 (342)
T ss_dssp EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEE-EEEE--TTSEEEEEECCTTCCSTTCTTCEEEE
T ss_pred EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEE-EEEe--cCCcEEEEEEcCCCcccccccceeee
Confidence 99999999999999998 533 234445678899999999 99874 4555 5999999999877 34477888
Q ss_pred cCCC---------CeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 270 EHKD---------VVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 270 ~~~~---------~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
.|.. .|.+++|+|++++|++++.||.|++|+..
T Consensus 240 ~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 240 CHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp CCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred cccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCc
Confidence 8865 99999999999999999999999999865
No 105
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-36 Score=276.32 Aligned_cols=245 Identities=19% Similarity=0.289 Sum_probs=209.7
Q ss_pred ccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecC--CCEEEEEecCCcEEEEEee
Q psy6213 51 NFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVE--SNWLISGSQDGTMRLFDIR 128 (330)
Q Consensus 51 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~--~~~l~~~~~d~~i~i~d~~ 128 (330)
...|++++|+| ++++|++|+.||.|++||+.. ........+.+|...|.+++|+| + +++|++|+.||.|++||+.
T Consensus 9 ~~~V~~l~~s~-dg~~latg~~dg~I~vwd~~~-~~~~~~~~l~~h~~~V~~l~~s~-~~~~~~l~s~s~Dg~I~vwd~~ 85 (753)
T 3jro_A 9 NELIHDAVLDY-YGKRLATCSSDKTIKIFEVEG-ETHKLIDTLTGHEGPVWRVDWAH-PKFGTILASCSYDGKVLIWKEE 85 (753)
T ss_dssp CCCEEEECCCS-SSCCEEEEETTTEEEEEEEET-TEEEEEEEECCCSSCEEEEEECC-TTSCSEEEEEETTSCEEEEEEE
T ss_pred cceeEEEEECC-CCCeEEEEECCCcEEEEecCC-CCCccceeccCCcCceEEEEecC-CCCCCEEEEEeCCCeEEEEECC
Confidence 34579999999 999999999999999999874 12567778889999999999997 5 8999999999999999999
Q ss_pred cCc--eeeeeecCCCCeEEEEEcCC--CCcEEEEEecCCcEEEEecCCCc-cceeeeccCCCCeEEEEEcC---------
Q psy6213 129 CQE--STKIFHSNTESVRDVEFNPH--SPYAFASVSENGTIQQWDVRRPE-KCFYQFTAHSGPIFACDWHP--------- 194 (330)
Q Consensus 129 ~~~--~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~~i~~~~~~~--------- 194 (330)
+++ ....+..|...|.+++|+|+ +. .+++++.||.|++||+++.. .....+..|...|.+++|+|
T Consensus 86 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 86 NGRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 164 (753)
T ss_dssp TTEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-------
T ss_pred CCcccccccccCCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccccc
Confidence 887 67777889999999999999 77 69999999999999998752 33456678999999999999
Q ss_pred ----CCCEEEEEecCCcEEEEeCCCCcc----ccceeccccceEEEEEcCC---CCeEEEEeecccCCeEEEEEccCCCc
Q psy6213 195 ----EHAWLATASRDKTIKVWDLSIKPS----LEYSINTIASVSRIKWRPQ---RKFHLASCSLVVDSSVNVWDIRRPYI 263 (330)
Q Consensus 195 ----~~~~l~~~~~dg~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~~~~~i~i~d~~~~~~ 263 (330)
++.++++++.||.|++||+++... ......|..+|.+++|+|+ +++ +++++ .||.|++||++++..
T Consensus 165 ~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~-l~s~s--~Dg~I~iwd~~~~~~ 241 (753)
T 3jro_A 165 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY-LASVS--QDRTCIIWTQDNEQG 241 (753)
T ss_dssp --CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE-EEEEE--SSSCEEEEEESSSSS
T ss_pred ccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCE-EEEEe--cCCEEEEecCCCCCC
Confidence 589999999999999999987743 3344567889999999999 776 55555 699999999988642
Q ss_pred ----cceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 264 ----PLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 264 ----~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
.......|...|++++|+|++++|++++.||.|++|+..
T Consensus 242 ~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 242 PWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp CCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred cceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 133345688899999999999999999999999999865
No 106
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.5e-35 Score=242.68 Aligned_cols=244 Identities=21% Similarity=0.316 Sum_probs=209.5
Q ss_pred ccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCC--CceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEee
Q psy6213 51 NFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISR--SKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR 128 (330)
Q Consensus 51 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (330)
...|++++|+|+++++|++|+.||+|++||+..... ..+...+.+|...|.+++|+| ++++|++++.|+.|++|+..
T Consensus 38 ~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~-dg~~l~s~~~d~~i~~~~~~ 116 (340)
T 4aow_A 38 NGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISS-DGQFALSGSWDGTLRLWDLT 116 (340)
T ss_dssp SSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETT
T ss_pred cCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECC-CCCEEEEEcccccceEEeec
Confidence 344799999995578999999999999999976332 235667889999999999998 89999999999999999999
Q ss_pred cCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCC--CEEEEEecCC
Q psy6213 129 CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEH--AWLATASRDK 206 (330)
Q Consensus 129 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~l~~~~~dg 206 (330)
..........+...+....++++++ .+++++.|+.+++||+............|...+..++|++++ .++++++.|+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~-~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~ 195 (340)
T 4aow_A 117 TGTTTRRFVGHTKDVLSVAFSSDNR-QIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDK 195 (340)
T ss_dssp TTEEEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTS
T ss_pred ccceeeeecCCCCceeEEEEeecCc-cceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCC
Confidence 9888888888888999999999998 589999999999999987666666777899999999998864 5789999999
Q ss_pred cEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCE
Q psy6213 207 TIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQL 286 (330)
Q Consensus 207 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 286 (330)
.|++||+++.+.......|..+|.+++|+|++++ +++++ .|+.|++||+++.+. +..+.. ...|.+++|+|++.+
T Consensus 196 ~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~s--~Dg~i~iwd~~~~~~-~~~~~~-~~~v~~~~~~~~~~~ 270 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL-CASGG--KDGQAMLWDLNEGKH-LYTLDG-GDIINALCFSPNRYW 270 (340)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE-EEEEE--TTCEEEEEETTTTEE-EEEEEC-SSCEEEEEECSSSSE
T ss_pred EEEEEECCCCceeeEecCCCCcEEEEEECCCCCE-EEEEe--CCCeEEEEEeccCce-eeeecC-CceEEeeecCCCCce
Confidence 9999999998777777788999999999999997 55555 699999999998865 556654 468999999998765
Q ss_pred EEEeecCCeEeeeecc
Q psy6213 287 FIASSRVSIIPRAKNI 302 (330)
Q Consensus 287 l~s~~~dg~i~iw~~~ 302 (330)
++++.|+.|++|+..
T Consensus 271 -~~~~~d~~i~iwd~~ 285 (340)
T 4aow_A 271 -LCAATGPSIKIWDLE 285 (340)
T ss_dssp -EEEEETTEEEEEETT
T ss_pred -eeccCCCEEEEEECC
Confidence 556789999999854
No 107
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-36 Score=276.30 Aligned_cols=247 Identities=20% Similarity=0.291 Sum_probs=203.9
Q ss_pred CCcccceEEEEeeCCCeee-cC-CCeEEEEEcCCc--ceeeeeceeeccccccccceeeeeecccC--CcEEEEEcCCCc
Q psy6213 2 AYLSPVHKHGLKADNGLAQ-PS-RNVFKIFLIKDT--EFVETHNLRVGKNINLNFSCNDVAWSCIE--ENHIATGATNGA 75 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~-~g-d~~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~dg~ 75 (330)
+|.++|++++|+|+|++++ ++ ||.|++||+.++ +....+..| ...|.+++|+| + +++|++|+.||.
T Consensus 7 gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h-------~~~V~~l~~s~-~~~~~~l~s~s~Dg~ 78 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGH-------EGPVWRVDWAH-PKFGTILASCSYDGK 78 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCC-------SSCEEEEEECC-TTSCSEEEEEETTSC
T ss_pred cCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCC-------cCceEEEEecC-CCCCCEEEEEeCCCe
Confidence 6999999999999999944 44 999999999854 333333333 34479999998 6 899999999999
Q ss_pred EEEEECCCCCCCceeEEecccccceeEEEEEecC--CCEEEEEecCCcEEEEEeecCc--eeeeeecCCCCeEEEEEcCC
Q psy6213 76 VVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVE--SNWLISGSQDGTMRLFDIRCQE--STKIFHSNTESVRDVEFNPH 151 (330)
Q Consensus 76 i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~--~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~ 151 (330)
|++||+.+. .......+..|...|.+++|+| + ++++++|+.||.|++||++++. ....+..|...|.+++|+|.
T Consensus 79 I~vwd~~~~-~~~~~~~~~~h~~~V~~v~~sp-~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~ 156 (753)
T 3jro_A 79 VLIWKEENG-RWSQIAVHAVHSASVNSVQWAP-HEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (753)
T ss_dssp EEEEEEETT-EEEEEEEECCCSSCEEEEEECC-GGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCC
T ss_pred EEEEECCCC-cccccccccCCCCCeEEEEECC-CCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCc
Confidence 999999872 1236677888999999999999 6 8999999999999999998773 34556778999999999994
Q ss_pred -------------CCcEEEEEecCCcEEEEecCCCc---cceeeeccCCCCeEEEEEcCC---CCEEEEEecCCcEEEEe
Q psy6213 152 -------------SPYAFASVSENGTIQQWDVRRPE---KCFYQFTAHSGPIFACDWHPE---HAWLATASRDKTIKVWD 212 (330)
Q Consensus 152 -------------~~~~~~~~~~dg~i~i~d~~~~~---~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d 212 (330)
+. .+++|+.||.|++||+++.. .....+.+|...|.+++|+|+ +++|++++.||.|++||
T Consensus 157 ~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd 235 (753)
T 3jro_A 157 TIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWT 235 (753)
T ss_dssp C---------CGGGC-CEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEE
T ss_pred ccccccccccCCCCC-EEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEec
Confidence 66 69999999999999998743 445677889999999999999 89999999999999999
Q ss_pred CCCCc-----cccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCC
Q psy6213 213 LSIKP-----SLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY 262 (330)
Q Consensus 213 ~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~ 262 (330)
++++. .......+...+.+++|+|+++++++++ .||.|++|+++.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s---~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 236 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG---GDNKVTLWKENLEG 287 (753)
T ss_dssp ESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEEC---SSSCEECCBCCSSS
T ss_pred CCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEc---CCCEEEEEecCCCC
Confidence 98864 2333344778899999999999855544 59999999998543
No 108
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-36 Score=260.91 Aligned_cols=270 Identities=13% Similarity=0.207 Sum_probs=205.9
Q ss_pred EeeCCCeeecCCCeEEEEEcCCcceeeee-ceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCC---CCCC
Q psy6213 12 LKADNGLAQPSRNVFKIFLIKDTEFVETH-NLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQ---ISRS 87 (330)
Q Consensus 12 ~s~~~~~~~~gd~~i~iw~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~---~~~~ 87 (330)
|+|+++.++.+. .|+.. ++....+ ..| ...|++++|+|.++++|++|+.||.|++||+.+ ....
T Consensus 35 f~~~~~~~~~~~----~w~~~-g~~~~~~~~~h-------~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~ 102 (437)
T 3gre_A 35 FGPIQEIVRSPN----MGNLR-GKLIATLMENE-------PNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVY 102 (437)
T ss_dssp GCCCCCCCCCCC----GGGCC-CCEEEEECTTT-------TSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCC
T ss_pred cCCccccccccc----ccccc-ceEEeeeccCC-------CCceEEEEECCCCCCEEEEecCCceEEEeECcccccCccc
Confidence 455555533332 37633 4444444 322 334799999986788999999999999999865 2212
Q ss_pred ceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEee---cCceeeeeec------------CCCCeEEEE--EcC
Q psy6213 88 KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR---CQESTKIFHS------------NTESVRDVE--FNP 150 (330)
Q Consensus 88 ~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~~------------~~~~v~~~~--~~~ 150 (330)
.....+ .|...|.+++|+| ++++|++++.||.|++||++ +++....+.. +...+.++. +++
T Consensus 103 ~~~~~~-~h~~~v~~~~~~~-~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 180 (437)
T 3gre_A 103 SSSLTY-DCSSTVTQITMIP-NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNE 180 (437)
T ss_dssp SCSEEE-ECSSCEEEEEECT-TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECS
T ss_pred ceeeec-cCCCCEEEEEEeC-CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcC
Confidence 223333 4899999999998 89999999999999999995 5554443332 345566666 456
Q ss_pred CCCcEEEEEecCCcEEEEecCCCccceeeecc--CCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcccccee-cccc
Q psy6213 151 HSPYAFASVSENGTIQQWDVRRPEKCFYQFTA--HSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI-NTIA 227 (330)
Q Consensus 151 ~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~ 227 (330)
++. ++++++.||.|++||+++ .+.+..+.. |.+.|++++|+|++++|++++.||.|++||+++++...... .+..
T Consensus 181 ~~~-~l~~~~~d~~i~iwd~~~-~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~ 258 (437)
T 3gre_A 181 EKS-LLVALTNLSRVIIFDIRT-LERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHA 258 (437)
T ss_dssp SCE-EEEEEETTSEEEEEETTT-CCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCE
T ss_pred CCC-EEEEEeCCCeEEEEeCCC-CeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCC
Confidence 777 699999999999999998 666777777 88999999999999999999999999999999875555443 6777
Q ss_pred ceEEEEEcC----CCCeEEEEeecccCCeEEEEEccCCCccceEeec--------------------------CCCCeEE
Q psy6213 228 SVSRIKWRP----QRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTE--------------------------HKDVVSG 277 (330)
Q Consensus 228 ~v~~~~~~~----~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~--------------------------~~~~v~~ 277 (330)
+|.+++|+| ++.+ +++++ .|+.|++||+++++. +..+.+ |...|.+
T Consensus 259 ~v~~~~~~~~~s~~~~~-l~s~~--~dg~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~ 334 (437)
T 3gre_A 259 PITHVEVCQFYGKNSVI-VVGGS--SKTFLTIWNFVKGHC-QYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALST 334 (437)
T ss_dssp EEEEEEECTTTCTTEEE-EEEES--TTEEEEEEETTTTEE-EEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCC
T ss_pred ceEEEEeccccCCCccE-EEEEc--CCCcEEEEEcCCCcE-EEEEEcCCCCCccceecccccccccceecccccCCceEE
Confidence 999996654 5665 56665 699999999998764 444432 5667899
Q ss_pred EEEecCCCEEEEeecCCeEeeeecc
Q psy6213 278 LAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 278 ~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
++|+ ++++|++++.||.|++|+..
T Consensus 335 l~~~-~~~~l~s~~~d~~i~~wd~~ 358 (437)
T 3gre_A 335 ISVS-NDKILLTDEATSSIVMFSLN 358 (437)
T ss_dssp EEEE-TTEEEEEEGGGTEEEEEETT
T ss_pred EEEC-CceEEEecCCCCeEEEEECC
Confidence 9999 77999999999999999854
No 109
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-34 Score=236.86 Aligned_cols=232 Identities=16% Similarity=0.231 Sum_probs=200.3
Q ss_pred ccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecC
Q psy6213 51 NFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQ 130 (330)
Q Consensus 51 ~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~ 130 (330)
...|.+++| | ++++|++|+.||.|++||+.+ ......+..|...|.+++|+| +++++++++.||.|++|++...
T Consensus 18 ~~~v~~~~~-~-~~~~l~s~~~dg~v~vw~~~~---~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~ 91 (313)
T 3odt_A 18 DQDVRDVVA-V-DDSKVASVSRDGTVRLWSKDD---QWLGTVVYTGQGFLNSVCYDS-EKELLLFGGKDTMINGVPLFAT 91 (313)
T ss_dssp SSCEEEEEE-E-ETTEEEEEETTSEEEEEEESS---SEEEEEEEECSSCEEEEEEET-TTTEEEEEETTSCEEEEETTCC
T ss_pred CCCcEEEEe-c-CCCEEEEEEcCCcEEEEECCC---CEEEEEeecCCccEEEEEECC-CCCEEEEecCCCeEEEEEeeec
Confidence 344799999 8 899999999999999999977 677788888999999999998 8999999999999999998654
Q ss_pred ---ceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcC-CCCEEEEEecCC
Q psy6213 131 ---ESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHP-EHAWLATASRDK 206 (330)
Q Consensus 131 ---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg 206 (330)
+....+..|...|.+++|. ++ .+++++.||.|++|| . ......+..|...+.++.|.| +++++++++.||
T Consensus 92 ~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~d~~i~~~d--~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~ 165 (313)
T 3odt_A 92 SGEDPLYTLIGHQGNVCSLSFQ--DG-VVISGSWDKTAKVWK--E-GSLVYNLQAHNASVWDAKVVSFSENKFLTASADK 165 (313)
T ss_dssp TTSCC-CEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEE--T-TEEEEEEECCSSCEEEEEEEETTTTEEEEEETTS
T ss_pred CCCCcccchhhcccCEEEEEec--CC-EEEEEeCCCCEEEEc--C-CcEEEecccCCCceeEEEEccCCCCEEEEEECCC
Confidence 5577788899999999993 44 699999999999999 2 566778888999999999998 899999999999
Q ss_pred cEEEEeCCCCcccccee-ccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCC
Q psy6213 207 TIKVWDLSIKPSLEYSI-NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQ 285 (330)
Q Consensus 207 ~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 285 (330)
.|++||... ...... .+...+.+++|+|++. +++++ .++.|++||+++++. +..+..|...|.+++|+|++
T Consensus 166 ~i~i~d~~~--~~~~~~~~~~~~i~~~~~~~~~~-~~~~~---~dg~i~i~d~~~~~~-~~~~~~~~~~i~~~~~~~~~- 237 (313)
T 3odt_A 166 TIKLWQNDK--VIKTFSGIHNDVVRHLAVVDDGH-FISCS---NDGLIKLVDMHTGDV-LRTYEGHESFVYCIKLLPNG- 237 (313)
T ss_dssp CEEEEETTE--EEEEECSSCSSCEEEEEEEETTE-EEEEE---TTSEEEEEETTTCCE-EEEEECCSSCEEEEEECTTS-
T ss_pred CEEEEecCc--eEEEEeccCcccEEEEEEcCCCe-EEEcc---CCCeEEEEECCchhh-hhhhhcCCceEEEEEEecCC-
Confidence 999999433 233333 3788999999999998 45554 599999999998865 78889999999999999999
Q ss_pred EEEEeecCCeEeeeecc
Q psy6213 286 LFIASSRVSIIPRAKNI 302 (330)
Q Consensus 286 ~l~s~~~dg~i~iw~~~ 302 (330)
.|++++.||.|++|+..
T Consensus 238 ~l~~~~~dg~v~iwd~~ 254 (313)
T 3odt_A 238 DIVSCGEDRTVRIWSKE 254 (313)
T ss_dssp CEEEEETTSEEEEECTT
T ss_pred CEEEEecCCEEEEEECC
Confidence 68999999999999854
No 110
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.4e-34 Score=247.81 Aligned_cols=285 Identities=13% Similarity=0.070 Sum_probs=224.0
Q ss_pred cccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEEC
Q psy6213 4 LSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNL 81 (330)
Q Consensus 4 ~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~ 81 (330)
...+.+++|+|++.+++++ ++.|++||+.+++........ ....+...+.+++|+| ++.++++++.|+.|++||+
T Consensus 122 ~~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~--~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~ 198 (433)
T 3bws_A 122 GFQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPE--KYKKKLGFVETISIPE-HNELWVSQMQANAVHVFDL 198 (433)
T ss_dssp SSCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCH--HHHTTCCEEEEEEEGG-GTEEEEEEGGGTEEEEEET
T ss_pred CCCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcc--cccccCCceeEEEEcC-CCEEEEEECCCCEEEEEEC
Confidence 3457799999977775554 889999999998876533221 1122334578999998 9999999999999999999
Q ss_pred CCCCCCceeEEecccccceeEEEEEecCCCEE-EEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEe
Q psy6213 82 GQISRSKQERVFNDHKRTVNKVSFHYVESNWL-ISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVS 160 (330)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (330)
++ .+....+..|...+.+++|+| +++.+ ++++.|+.|++||+++++.+..+.. ...+.+++|+|+++. +++++
T Consensus 199 ~~---~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~g~~-l~~~~ 272 (433)
T 3bws_A 199 KT---LAYKATVDLTGKWSKILLYDP-IRDLVYCSNWISEDISVIDRKTKLEIRKTDK-IGLPRGLLLSKDGKE-LYIAQ 272 (433)
T ss_dssp TT---CCEEEEEECSSSSEEEEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEECCC-CSEEEEEEECTTSSE-EEEEE
T ss_pred CC---ceEEEEEcCCCCCeeEEEEcC-CCCEEEEEecCCCcEEEEECCCCcEEEEecC-CCCceEEEEcCCCCE-EEEEE
Confidence 87 677777888899999999998 66666 4555899999999999988877764 456999999999985 66665
Q ss_pred --------cCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCE-EEEEecCCcEEEEeCCCCccccceeccccceEE
Q psy6213 161 --------ENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSIKPSLEYSINTIASVSR 231 (330)
Q Consensus 161 --------~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~ 231 (330)
.||.|++||+++ .+....+ .+...+.+++|+|+++. +++++.|+.|++||+.+++.. ....+...+.+
T Consensus 273 ~~~~~~~~~dg~i~~~d~~~-~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~-~~~~~~~~~~~ 349 (433)
T 3bws_A 273 FSASNQESGGGRLGIYSMDK-EKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQ-KSIPVFDKPNT 349 (433)
T ss_dssp EESCTTCSCCEEEEEEETTT-TEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEE-EEEECSSSEEE
T ss_pred CCCCccccCCCeEEEEECCC-CcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEE-EEecCCCCCCe
Confidence 488999999987 4444443 45668899999999975 466689999999999987443 34456778999
Q ss_pred EEEcCCCCeEEEEeecc------------cCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeec-CCeEee
Q psy6213 232 IKWRPQRKFHLASCSLV------------VDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSR-VSIIPR 298 (330)
Q Consensus 232 ~~~~~~~~~l~~~~~~~------------~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-dg~i~i 298 (330)
++|+|+++++++++... .||.|++||+.+++. +..+.. ...+.+++|+|++++|++++. |+.|++
T Consensus 350 ~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~-~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v 427 (433)
T 3bws_A 350 IALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV-KEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRV 427 (433)
T ss_dssp EEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE-EEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEE
T ss_pred EEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcE-EEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEE
Confidence 99999999866665410 046999999988765 555555 457999999999999998875 999999
Q ss_pred eecc
Q psy6213 299 AKNI 302 (330)
Q Consensus 299 w~~~ 302 (330)
|+..
T Consensus 428 ~~~~ 431 (433)
T 3bws_A 428 YRRD 431 (433)
T ss_dssp EEET
T ss_pred EEec
Confidence 9754
No 111
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.7e-35 Score=246.12 Aligned_cols=249 Identities=10% Similarity=0.054 Sum_probs=187.4
Q ss_pred CcccceEEEEeeCC---------CeeecC--CCeEEEEEcCCcceeeeece--eeccccccccceeeeeecccCCcEEEE
Q psy6213 3 YLSPVHKHGLKADN---------GLAQPS--RNVFKIFLIKDTEFVETHNL--RVGKNINLNFSCNDVAWSCIEENHIAT 69 (330)
Q Consensus 3 H~~~v~~~~~s~~~---------~~~~~g--d~~i~iw~~~~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~ 69 (330)
|...|.+++++++. ..+..+ |+.+++|++...+....... ...........+.+++|+| +++++++
T Consensus 72 ~~~~v~s~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSp-Dg~~la~ 150 (365)
T 4h5i_A 72 NDDSPTAIDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISR-EGTVAAI 150 (365)
T ss_dssp TSCCCCEEEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECT-TSSCEEE
T ss_pred CCCceEEEEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcC-CCCEEEE
Confidence 56677777765431 112334 88999999876542221111 1111122233468899999 9998765
Q ss_pred E--cCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeee--eecCCCCeEE
Q psy6213 70 G--ATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKI--FHSNTESVRD 145 (330)
Q Consensus 70 ~--~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~v~~ 145 (330)
+ +.|+.|++||+.+ .+....+. |...|.+++|+| +++++++++.+ .+.+|+..+++.+.. ...|...|.+
T Consensus 151 as~~~d~~i~iwd~~~---~~~~~~~~-~~~~V~~v~fsp-dg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~ 224 (365)
T 4h5i_A 151 ASSKVPAIMRIIDPSD---LTEKFEIE-TRGEVKDLHFST-DGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSK 224 (365)
T ss_dssp EESCSSCEEEEEETTT---TEEEEEEE-CSSCCCEEEECT-TSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEE
T ss_pred EECCCCCEEEEeECCC---CcEEEEeC-CCCceEEEEEcc-CCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEE
Confidence 4 4789999999988 66666664 778899999999 89999999855 677777776765533 3457788999
Q ss_pred EEEcCCCCcEEEEEecCC----cEEEEecCCCccc---eeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcc
Q psy6213 146 VEFNPHSPYAFASVSENG----TIQQWDVRRPEKC---FYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPS 218 (330)
Q Consensus 146 ~~~~~~~~~~~~~~~~dg----~i~i~d~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 218 (330)
++|+|+++ .+++++.++ .+++||+...... ...+.+|...|++++|+|+|++|++|+.|+.|+|||+++++.
T Consensus 225 v~fspdg~-~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~ 303 (365)
T 4h5i_A 225 INFIADDT-VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSM 303 (365)
T ss_dssp EEEEETTE-EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEE
T ss_pred EEEcCCCC-EEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcE
Confidence 99999998 578887776 5888988763322 345678899999999999999999999999999999999876
Q ss_pred ccce-eccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCC
Q psy6213 219 LEYS-INTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY 262 (330)
Q Consensus 219 ~~~~-~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~ 262 (330)
+... ..|..+|++++|+|||++ +++++ .|++|+|||+....
T Consensus 304 ~~~~~~gH~~~V~~v~fSpdg~~-laS~S--~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 304 SKIFKQAHSFAITEVTISPDSTY-VASVS--AANTIHIIKLPLNY 345 (365)
T ss_dssp EEEETTSSSSCEEEEEECTTSCE-EEEEE--TTSEEEEEECCTTT
T ss_pred EEEecCcccCCEEEEEECCCCCE-EEEEe--CCCeEEEEEcCCCC
Confidence 6554 568999999999999997 66677 79999999997543
No 112
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.1e-35 Score=251.04 Aligned_cols=258 Identities=12% Similarity=0.054 Sum_probs=198.9
Q ss_pred CCcccceEEEEeeCCCeeecCCCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEEC
Q psy6213 2 AYLSPVHKHGLKADNGLAQPSRNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNL 81 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~gd~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~ 81 (330)
.|...|++++|+|+| .++. |++.+++....+.... ...|.+++|+| ++..||+++.||.|++||.
T Consensus 50 gh~~~v~~V~FsPdg-----~~~~---~~~~~~~~~~~~~~~~------~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~ 114 (588)
T 2j04_A 50 CNSKNLFHVKEFPLE-----FENK---LDFELAQQNGLLNSQP------VCYPRVCKPSP-IDDWMAVLSNNGNVSVFKD 114 (588)
T ss_dssp SBGGGTEEEEEECCC-----CCCT---TTTSCCCSSCSSTTSC------SCCEEEEEECS-SSSCEEEEETTSCEEEEET
T ss_pred CCCccEEEEEECCCC-----Ccce---EEEEeCCCceEeecCC------CCcEEEEEECC-CCCEEEEEeCCCcEEEEeC
Confidence 589999999999998 2444 4444433222222211 23479999999 9999999999999999995
Q ss_pred CCCCCCceeEEeccccc-----ceeEEEEEecCCCEEEEEecCCcEEEEEeecCce-------eeee----ecCCCCeEE
Q psy6213 82 GQISRSKQERVFNDHKR-----TVNKVSFHYVESNWLISGSQDGTMRLFDIRCQES-------TKIF----HSNTESVRD 145 (330)
Q Consensus 82 ~~~~~~~~~~~~~~~~~-----~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-------~~~~----~~~~~~v~~ 145 (330)
+. ....+. |.. .+.+++|+| ++++|++|+.||+|++||+.++.. +.++ .+|...|.+
T Consensus 115 ~~-----~l~~l~-~~~~~~~~sv~svafSP-DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~s 187 (588)
T 2j04_A 115 NK-----MLTNLD-SKGNLSSRTYHCFEWNP-IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTH 187 (588)
T ss_dssp TE-----EEEECC-CSSCSTTTCEEEEEECS-SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEE
T ss_pred Cc-----eeeecc-CCCccccccEEEEEEcC-CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEE
Confidence 32 555556 655 599999999 999999999999999999998753 4565 557789999
Q ss_pred EEEcCCCCcEEEEEecCCcEEEEecCCCcc--ceeee-ccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccce
Q psy6213 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEK--CFYQF-TAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYS 222 (330)
Q Consensus 146 ~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~--~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 222 (330)
++|+|++ +++++.|+.|++||+..... ...++ .+|...|.+++|+ |+.|++++ ++.|++||+.+++.....
T Consensus 188 VawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~ 261 (588)
T 2j04_A 188 IVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLK 261 (588)
T ss_dssp EEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEE
T ss_pred EEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEE
Confidence 9999998 67888899999999987442 22445 4788999999999 68899887 699999999988554555
Q ss_pred eccccceEEEEE--cCCCCeEEEEeecccCCeEEEEEccC-----CC-----------------ccceEeecCCCCeEEE
Q psy6213 223 INTIASVSRIKW--RPQRKFHLASCSLVVDSSVNVWDIRR-----PY-----------------IPLASFTEHKDVVSGL 278 (330)
Q Consensus 223 ~~~~~~v~~~~~--~~~~~~l~~~~~~~~~~~i~i~d~~~-----~~-----------------~~~~~~~~~~~~v~~~ 278 (330)
.+|...+..++| +|++.. ++++. ++|. ++|.... .. .+...+. +...|.++
T Consensus 262 ~gh~~~V~~va~~~s~d~~~-La~a~--edG~-klw~~d~~~~spd~~l~a~~d~~v~lW~~~g~~l~~~~-~~~~I~~v 336 (588)
T 2j04_A 262 TGSLENFHIIPLNHEKESTI-LLMSN--KTSY-KVLLEDELHVTADNIIAPYLEKKFKKWSTIWNEFNNYE-TTLVIHGI 336 (588)
T ss_dssp CSCCSCCCEEEETTCSSCEE-EEECS--SCEE-EEEESSSEEEECCCSSHHHHHHHHHHTTTTTTSSSSSC-CEEEEEEE
T ss_pred cCCCceEEEEEeeeCCCCCE-EEEEc--CCCC-EEEeeccEEECCCceEEEEcCCEEEEEECCCCceeeec-cceEEEEE
Confidence 579999999999 999986 55555 5899 9998631 10 0011222 24469999
Q ss_pred EEecCCCEEEEeec
Q psy6213 279 AWRGDPQLFIASSR 292 (330)
Q Consensus 279 ~~~~~~~~l~s~~~ 292 (330)
+|+|||+.+|+++.
T Consensus 337 a~SPdG~~lA~~~~ 350 (588)
T 2j04_A 337 SLSPDGYSIAIVYD 350 (588)
T ss_dssp EECTTSSEEEEEEE
T ss_pred EECCCCCEEEEEEe
Confidence 99999999999875
No 113
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=2.3e-33 Score=237.06 Aligned_cols=264 Identities=11% Similarity=0.082 Sum_probs=210.9
Q ss_pred eecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEE-EEEcCCCcEEEEECCCCCCCceeEEeccc
Q psy6213 19 AQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHI-ATGATNGAVVVWNLGQISRSKQERVFNDH 96 (330)
Q Consensus 19 ~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~~ 96 (330)
++++ |+.|++||+++++....+..+. .+.+++|+| +++++ ++++.|+.|++||+.+ .+....+..+
T Consensus 6 vs~~~d~~v~v~d~~~~~~~~~~~~~~--------~~~~~~~s~-dg~~l~~~~~~d~~i~v~d~~~---~~~~~~~~~~ 73 (391)
T 1l0q_A 6 IANSESDNISVIDVTSNKVTATIPVGS--------NPMGAVISP-DGTKVYVANAHSNDVSIIDTAT---NNVIATVPAG 73 (391)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECSS--------SEEEEEECT-TSSEEEEEEGGGTEEEEEETTT---TEEEEEEECS
T ss_pred EEcCCCCEEEEEECCCCeEEEEeecCC--------CcceEEECC-CCCEEEEECCCCCeEEEEECCC---CeEEEEEECC
Confidence 4445 9999999999988776554332 258999999 87765 6777899999999987 6666666655
Q ss_pred ccceeEEEEEecCCCEEE-EEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCcc
Q psy6213 97 KRTVNKVSFHYVESNWLI-SGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEK 175 (330)
Q Consensus 97 ~~~i~~i~~~~~~~~~l~-~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~ 175 (330)
. .+.+++|+| ++++++ +++.++.|++||+.+++.+..+.. ...+.+++|+|+++.++++++.++.|++||+++ .+
T Consensus 74 ~-~v~~~~~sp-dg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~-~~ 149 (391)
T 1l0q_A 74 S-SPQGVAVSP-DGKQVYVTNMASSTLSVIDTTSNTVAGTVKT-GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT-KA 149 (391)
T ss_dssp S-SEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTT-TE
T ss_pred C-CccceEECC-CCCEEEEEECCCCEEEEEECCCCeEEEEEeC-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC-Cc
Confidence 4 899999999 777664 555679999999999988887774 457899999999997668888899999999987 55
Q ss_pred ceeeeccCCCCeEEEEEcCCCCEE-EEEecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEE
Q psy6213 176 CFYQFTAHSGPIFACDWHPEHAWL-ATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254 (330)
Q Consensus 176 ~~~~~~~~~~~i~~~~~~~~~~~l-~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~ 254 (330)
....+..+ ..+.+++|+|+++++ ++++.++.|++||+++++.. ....+...+.+++|+|+++++++++....++.|+
T Consensus 150 ~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~ 227 (391)
T 1l0q_A 150 VINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVI-DTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVS 227 (391)
T ss_dssp EEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE-EEEECSSEEEEEEECTTSSEEEEEEECSSCCEEE
T ss_pred EEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEE-EEEecCCCccceEECCCCCEEEEEecCcCCCcEE
Confidence 56666654 567999999999887 56778899999999987443 3444567889999999999877776311289999
Q ss_pred EEEccCCCccceEeecCCCCeEEEEEecCCCEE-EEeecCCeEeeeecc
Q psy6213 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLF-IASSRVSIIPRAKNI 302 (330)
Q Consensus 255 i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~s~~~dg~i~iw~~~ 302 (330)
+||+++++. +..+..|. .+.+++|+|++++| ++++.|+.|++|+..
T Consensus 228 ~~d~~~~~~-~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 228 MIDTGTNKI-TARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp EEETTTTEE-EEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred EEECCCCeE-EEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 999998865 66666654 57899999999877 677889999999854
No 114
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-35 Score=243.32 Aligned_cols=229 Identities=14% Similarity=0.075 Sum_probs=180.4
Q ss_pred eeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEee-------
Q psy6213 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR------- 128 (330)
Q Consensus 56 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~------- 128 (330)
...+.+ ++.++++|+.||.|++||+.+ ++....+. ...|.++.++| . +++++.|++|++|+..
T Consensus 41 ~~~~~~-d~~~l~sg~~Dg~v~iwd~~~---~~~~~~~~--~~~v~~~~~~~-~---~~s~s~D~~i~~w~~~~~~~~~~ 110 (343)
T 3lrv_A 41 NKSMYY-DKWVCMCRCEDGALHFTQLKD---SKTITTIT--TPNPRTGGEHP-A---IISRGPCNRLLLLYPGNQITILD 110 (343)
T ss_dssp CSSSSE-EEEEEEEEEETTEEEEEEESS---SSCEEEEE--EECCCTTCCCC-S---EEEECSTTEEEEEETTTEEEEEE
T ss_pred hhhhcC-CCCEEEEECCCCcEEEEECCC---CcEEEEEe--cCCceeeeeCC-c---eEEecCCCeEEEEEccCceEEee
Confidence 344555 789999999999999999988 55555554 56788889987 4 9999999999999765
Q ss_pred --cCceeeeee-cCCCCeEEEEEcC--CCCcEEEEEecCCcEEEEecCCCccceeee-ccCCCCeEEEEEcCCCCEEEEE
Q psy6213 129 --CQESTKIFH-SNTESVRDVEFNP--HSPYAFASVSENGTIQQWDVRRPEKCFYQF-TAHSGPIFACDWHPEHAWLATA 202 (330)
Q Consensus 129 --~~~~~~~~~-~~~~~v~~~~~~~--~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~ 202 (330)
+++.+..+. .|..+|.+++|+| +++ ++++++.||.|++||++++ +..... ..+...+.+++|+|++.+|++|
T Consensus 111 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~~~-~~~~~~~~~~~~~i~~~~~~pdg~~lasg 188 (343)
T 3lrv_A 111 SKTNKVLREIEVDSANEIIYMYGHNEVNTE-YFIWADNRGTIGFQSYEDD-SQYIVHSAKSDVEYSSGVLHKDSLLLALY 188 (343)
T ss_dssp TTTCCEEEEEECCCSSCEEEEECCC---CC-EEEEEETTCCEEEEESSSS-CEEEEECCCSSCCCCEEEECTTSCEEEEE
T ss_pred cCCcceeEEeecCCCCCEEEEEcCCCCCCC-EEEEEeCCCcEEEEECCCC-cEEEEEecCCCCceEEEEECCCCCEEEEE
Confidence 444344443 5668899999999 888 6999999999999999984 444444 3456689999999999999999
Q ss_pred ecCCcEEEEeCCCCccc-cceec-cccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEee---cCCCCeE-
Q psy6213 203 SRDKTIKVWDLSIKPSL-EYSIN-TIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFT---EHKDVVS- 276 (330)
Q Consensus 203 ~~dg~i~i~d~~~~~~~-~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~---~~~~~v~- 276 (330)
+.||.|++||+++++.. ..... |..+|.+++|+|++.+ +++++ ++.|++||+++.+. ...+. .|...+.
T Consensus 189 ~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~-l~s~~---~~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~ 263 (343)
T 3lrv_A 189 SPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYW-MVVEC---DQTVVCFDLRKDVG-TLAYPTYTIPEFKTGT 263 (343)
T ss_dssp CTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSE-EEEEE---SSBEEEEETTSSTT-CBSSCCCBC-----CC
T ss_pred cCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCE-EEEEe---CCeEEEEEcCCCCc-ceeecccccccccccc
Confidence 99999999999998765 44444 7899999999999997 55555 45999999998765 33332 2444444
Q ss_pred -EEEEecCCCEEEEeec-CCeEeeeec
Q psy6213 277 -GLAWRGDPQLFIASSR-VSIIPRAKN 301 (330)
Q Consensus 277 -~~~~~~~~~~l~s~~~-dg~i~iw~~ 301 (330)
+++|+|++++|++++. |+.+++|+.
T Consensus 264 ~~~~~~~~g~~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 264 VTYDIDDSGKNMIAYSNESNSLTIYKF 290 (343)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred eEEEECCCCCEEEEecCCCCcEEEEEE
Confidence 6999999999999998 999999965
No 115
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=7.1e-34 Score=241.19 Aligned_cols=281 Identities=13% Similarity=0.114 Sum_probs=191.1
Q ss_pred CCcccceEEEEee-CCCe-eecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeeccc--CCcEEEEEcCCCcE
Q psy6213 2 AYLSPVHKHGLKA-DNGL-AQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCI--EENHIATGATNGAV 76 (330)
Q Consensus 2 ~H~~~v~~~~~s~-~~~~-~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i 76 (330)
.|.++|.+++|+| ++.+ ++++ ||.|++||+.+++....+.. ...+.+++|+|. ++.++++++.||.|
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~v 168 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNF--------EETVYSHHMSPVSTKHCLVAVGTRGPKV 168 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEEC--------SSCEEEEEECSSCSSCCEEEEEESSSSE
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccC--------CCceeeeEeecCCCCCcEEEEEcCCCeE
Confidence 3899999999999 6666 5555 99999999999877665542 223578888872 33499999999999
Q ss_pred EEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCc-eeeee---------------ecCC
Q psy6213 77 VVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQE-STKIF---------------HSNT 140 (330)
Q Consensus 77 ~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~---------------~~~~ 140 (330)
++||+.+ .+....+..|...|.+++|+|.+..++++++.||.|++||++++. ....+ ..|.
T Consensus 169 ~~~d~~~---~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (408)
T 4a11_B 169 QLCDLKS---GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHN 245 (408)
T ss_dssp EEEESSS---SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCS
T ss_pred EEEeCCC---cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecccccccc
Confidence 9999987 677788889999999999999444479999999999999998765 33333 4678
Q ss_pred CCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccC-----CCCeEEEEEcCCCCEEEEEecCCcEEEEeCCC
Q psy6213 141 ESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAH-----SGPIFACDWHPEHAWLATASRDKTIKVWDLSI 215 (330)
Q Consensus 141 ~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 215 (330)
..|.+++|+|+++ .+++++.||.|++||+++... ......+ ...+........+..+++++.|+.|++||+.+
T Consensus 246 ~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~ 323 (408)
T 4a11_B 246 GKVNGLCFTSDGL-HLLTVGTDNRMRLWNSSNGEN-TLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYS 323 (408)
T ss_dssp SCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCB-CCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTT
T ss_pred CceeEEEEcCCCC-EEEEecCCCeEEEEECCCCcc-ceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcC
Confidence 8999999999998 599999999999999998433 3222211 12222222233456677788899999999999
Q ss_pred CccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEec-CCCEEEEeecCC
Q psy6213 216 KPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRG-DPQLFIASSRVS 294 (330)
Q Consensus 216 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~~dg 294 (330)
++.......|...|.+++|+|++++ +++++ .||.|++||+++.+. +.....+. ....+.+ ....+.+++.++
T Consensus 324 ~~~~~~~~~~~~~v~~~~~s~~~~~-l~s~~--~dg~i~iw~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 396 (408)
T 4a11_B 324 GEQITMLKGHYKTVDCCVFQSNFQE-LYSGS--RDCNILAWVPSLYEP-VPDDDETT---TKSQLNPAFEDAWSSSDEEG 396 (408)
T ss_dssp CCEEEEECCCSSCEEEEEEETTTTE-EEEEE--TTSCEEEEEECC-----------------------------------
T ss_pred CcceeeeccCCCeEEEEEEcCCCCE-EEEEC--CCCeEEEEeCCCCCc-cCCCCceE---eccccccccceeecccCccC
Confidence 9777777788999999999999997 55555 599999999998765 33333222 1223333 445566778899
Q ss_pred eEeeeecc
Q psy6213 295 IIPRAKNI 302 (330)
Q Consensus 295 ~i~iw~~~ 302 (330)
.+++|...
T Consensus 397 ~~~~W~~~ 404 (408)
T 4a11_B 397 GTSAWSHP 404 (408)
T ss_dssp --------
T ss_pred ceeecCCc
Confidence 99999654
No 116
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-33 Score=242.22 Aligned_cols=240 Identities=12% Similarity=0.118 Sum_probs=195.8
Q ss_pred ceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEec--------------------------------------
Q psy6213 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFN-------------------------------------- 94 (330)
Q Consensus 53 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-------------------------------------- 94 (330)
++.+++|+| ++++|+++ .++.|++||+.++.....+..+.
T Consensus 6 p~~~v~~s~-dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 6 PLQNLLTSR-DGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCEEEECS-SSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred cEEEEEecC-CCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 468999999 88866665 57899999987733111333332
Q ss_pred ----------------ccccceeEEEEEecCCCEE-EEEecCCcEEEEEee--cCceeeeee--cCCCCeEEEEEcCCCC
Q psy6213 95 ----------------DHKRTVNKVSFHYVESNWL-ISGSQDGTMRLFDIR--CQESTKIFH--SNTESVRDVEFNPHSP 153 (330)
Q Consensus 95 ----------------~~~~~i~~i~~~~~~~~~l-~~~~~d~~i~i~d~~--~~~~~~~~~--~~~~~v~~~~~~~~~~ 153 (330)
.|...|.+++|+| ++++| ++++.||.|++||+. +++.+..+. .+...|.+++|+|+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp ----------------CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 2334799999999 77775 899999999999999 888888776 5678899999999998
Q ss_pred cEEEEEecCCcEEEEecCCCcc---ceeeeccCCCCeEEEEEcCC---CCEEEEEecCCcEEEEeCCCCccccc-eeccc
Q psy6213 154 YAFASVSENGTIQQWDVRRPEK---CFYQFTAHSGPIFACDWHPE---HAWLATASRDKTIKVWDLSIKPSLEY-SINTI 226 (330)
Q Consensus 154 ~~~~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~ 226 (330)
.|++++.+|.+++|++.+... ....+.+|...|.+++|+|+ +++|++++.|+.|++||+++++.... ...|.
T Consensus 163 -~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~ 241 (450)
T 2vdu_B 163 -TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK 241 (450)
T ss_dssp -EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS
T ss_pred -EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC
Confidence 589999999999999987432 23367789999999999999 99999999999999999998866554 44688
Q ss_pred cceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeec-------------------------CCCCeEEEEEe
Q psy6213 227 ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTE-------------------------HKDVVSGLAWR 281 (330)
Q Consensus 227 ~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~-------------------------~~~~v~~~~~~ 281 (330)
..|.+++|+ ++++ +++++ .|+.|++||+++++. +..+.. ....|.+++|+
T Consensus 242 ~~v~~~~~s-d~~~-l~s~~--~d~~v~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~ 316 (450)
T 2vdu_B 242 HFVSSICCG-KDYL-LLSAG--GDDKIFAWDWKTGKN-LSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKS 316 (450)
T ss_dssp SCEEEEEEC-STTE-EEEEE--SSSEEEEEETTTCCE-EEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEEC
T ss_pred CceEEEEEC-CCCE-EEEEe--CCCeEEEEECCCCcE-eeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEe
Confidence 999999999 9997 55555 699999999998875 555542 23579999999
Q ss_pred cCCCEEEEee-cCCeEeeeec
Q psy6213 282 GDPQLFIASS-RVSIIPRAKN 301 (330)
Q Consensus 282 ~~~~~l~s~~-~dg~i~iw~~ 301 (330)
|++++|++++ .|+.|++|+.
T Consensus 317 ~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 317 KNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp SSSSEEEEEETTCSEEEEEEE
T ss_pred CCCCEEEEEECCCCeEEEEEe
Confidence 9999999999 8999999987
No 117
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=5.9e-33 Score=227.79 Aligned_cols=242 Identities=12% Similarity=0.242 Sum_probs=199.1
Q ss_pred CCcccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVW 79 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw 79 (330)
.|...|++++|+|+++++++| ||.|++|++++++....+..+... +. ++++ ++..+++++.++.+++|
T Consensus 65 ~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~-------~~--~~~~-~~~~l~s~~~~~~~~~~ 134 (318)
T 4ggc_A 65 QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSAR-------VG--SLSW-NSYILSSGSRSGHIHHH 134 (318)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC-------EE--EEEE-ETTEEEEEETTSEEEEE
T ss_pred CCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccce-------EE--Eeec-CCCEEEEEecCCceEee
Confidence 478889999999999995555 999999999999887776655432 23 4455 67899999999999999
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCce----eeeeecCCCCeEEEEEcCCCCcE
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQES----TKIFHSNTESVRDVEFNPHSPYA 155 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~ 155 (330)
+.... ......+.+|...+..+.+.+ +++++++++.|+.|++||+++++. ......+...|.+++++|.+..+
T Consensus 135 ~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 211 (318)
T 4ggc_A 135 DVRVA--EHHVATLSGHSQEVCGLRWAP-DGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNV 211 (318)
T ss_dssp ETTSS--SCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTE
T ss_pred ecCCC--ceeEEEEcCccCceEEEEEcC-CCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcE
Confidence 98763 456677889999999999998 899999999999999999987654 34445577899999999998876
Q ss_pred EE--EEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEe--cCCcEEEEeCCCCccccceeccccceEE
Q psy6213 156 FA--SVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS--RDKTIKVWDLSIKPSLEYSINTIASVSR 231 (330)
Q Consensus 156 ~~--~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~v~~ 231 (330)
+. +++.++.|++||.+.. ... ....+...+..+.|+|++..+++++ .|+.|++||+++++.+.....|...|++
T Consensus 212 ~~~~~~~~~~~i~lwd~~~~-~~~-~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~ 289 (318)
T 4ggc_A 212 LATGGGTSDRHIRIWNVCSG-ACL-SAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLS 289 (318)
T ss_dssp EEEEECTTTCEEEEEETTTC-CEE-EEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred EEEEecCCCCEEEEEecccc-ccc-ccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEE
Confidence 54 4567899999999873 333 3344778899999999999887765 7999999999999888778889999999
Q ss_pred EEEcCCCCeEEEEeecccCCeEEEEEccCC
Q psy6213 232 IKWRPQRKFHLASCSLVVDSSVNVWDIRRP 261 (330)
Q Consensus 232 ~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~ 261 (330)
++|+|++++ +++++ .|++|++||+...
T Consensus 290 l~~spdg~~-l~S~s--~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 290 LTMSPDGAT-VASAA--ADETLRLWRCFEL 316 (318)
T ss_dssp EEECTTSSC-EEEEE--TTTEEEEECCSCC
T ss_pred EEEcCCCCE-EEEEe--cCCeEEEEECCCC
Confidence 999999997 55566 6999999998754
No 118
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=8e-33 Score=236.95 Aligned_cols=228 Identities=20% Similarity=0.419 Sum_probs=200.7
Q ss_pred ceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCce
Q psy6213 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQES 132 (330)
Q Consensus 53 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (330)
.|.+++| +++++++|+.||.|++||+.+ .+....+.+|...|.+++| +++++++|+.||.|++||+++++.
T Consensus 135 ~v~~~~~---d~~~l~~g~~dg~i~iwd~~~---~~~~~~~~~h~~~v~~l~~---~~~~l~sg~~dg~i~vwd~~~~~~ 205 (435)
T 1p22_A 135 GVYCLQY---DDQKIVSGLRDNTIKIWDKNT---LECKRILTGHTGSVLCLQY---DERVIITGSSDSTVRVWDVNTGEM 205 (435)
T ss_dssp CEEEEEC---CSSEEEEEESSSCEEEEESSS---CCEEEEECCCSSCEEEEEC---CSSEEEEEETTSCEEEEESSSCCE
T ss_pred cEEEEEE---CCCEEEEEeCCCeEEEEeCCC---CeEEEEEcCCCCcEEEEEE---CCCEEEEEcCCCeEEEEECCCCcE
Confidence 3566665 689999999999999999988 7788889999999999998 578999999999999999999999
Q ss_pred eeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccc--eeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEE
Q psy6213 133 TKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC--FYQFTAHSGPIFACDWHPEHAWLATASRDKTIKV 210 (330)
Q Consensus 133 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 210 (330)
+..+..|...|.+++|+++ .+++++.||.|++||+++.... ...+.+|...|.+++| +++++++++.||.|++
T Consensus 206 ~~~~~~h~~~v~~l~~~~~---~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~v 280 (435)
T 1p22_A 206 LNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKV 280 (435)
T ss_dssp EEEECCCCSCEEEEECCTT---EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEE
T ss_pred EEEEcCCCCcEEEEEEcCC---EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEE
Confidence 9999999999999999753 6999999999999999874432 2567789999999999 6889999999999999
Q ss_pred EeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEe
Q psy6213 211 WDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIAS 290 (330)
Q Consensus 211 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 290 (330)
||+++++.......+...+.++.|+ +.+ +++++ .||.|++||+++++. +..+.+|...|.+++| ++.+|+++
T Consensus 281 wd~~~~~~~~~~~~~~~~v~~~~~~--~~~-l~~g~--~dg~i~iwd~~~~~~-~~~~~~h~~~v~~~~~--~~~~l~sg 352 (435)
T 1p22_A 281 WNTSTCEFVRTLNGHKRGIACLQYR--DRL-VVSGS--SDNTIRLWDIECGAC-LRVLEGHEELVRCIRF--DNKRIVSG 352 (435)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEEE--TTE-EEEEE--TTSCEEEEETTTCCE-EEEECCCSSCEEEEEC--CSSEEEEE
T ss_pred EECCcCcEEEEEcCCCCcEEEEEeC--CCE-EEEEe--CCCeEEEEECCCCCE-EEEEeCCcCcEEEEEe--cCCEEEEE
Confidence 9999987777777788999999995 454 55555 699999999998876 8889999999999999 78899999
Q ss_pred ecCCeEeeeecc
Q psy6213 291 SRVSIIPRAKNI 302 (330)
Q Consensus 291 ~~dg~i~iw~~~ 302 (330)
+.||.|++|+..
T Consensus 353 ~~dg~i~vwd~~ 364 (435)
T 1p22_A 353 AYDGKIKVWDLV 364 (435)
T ss_dssp ETTSCEEEEEHH
T ss_pred eCCCcEEEEECC
Confidence 999999999853
No 119
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.5e-32 Score=235.14 Aligned_cols=237 Identities=12% Similarity=0.084 Sum_probs=199.6
Q ss_pred eeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeE-----EecccccceeEEEEEecCCCEEEEEecCCcEEEEEee
Q psy6213 54 CNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQER-----VFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR 128 (330)
Q Consensus 54 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-----~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~ 128 (330)
+.+++|+| ++.++++++.++.|++||+.+ .+... .+..|...+.+++|+| ++.++++++.|+.|++||++
T Consensus 125 ~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~---g~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~~d~~v~~~d~~ 199 (433)
T 3bws_A 125 PKSVRFID-NTRLAIPLLEDEGMDVLDINS---GQTVRLSPPEKYKKKLGFVETISIPE-HNELWVSQMQANAVHVFDLK 199 (433)
T ss_dssp BCCCEESS-SSEEEEEBTTSSSEEEEETTT---CCEEEECCCHHHHTTCCEEEEEEEGG-GTEEEEEEGGGTEEEEEETT
T ss_pred ceEEEEeC-CCeEEEEeCCCCeEEEEECCC---CeEeeecCcccccccCCceeEEEEcC-CCEEEEEECCCCEEEEEECC
Confidence 46899999 899999999999999999987 44444 3457888999999987 88999999999999999999
Q ss_pred cCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEe-----
Q psy6213 129 CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS----- 203 (330)
Q Consensus 129 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~----- 203 (330)
+++.+..+..+...+.+++|+|+++.++++++.++.|++||+++ .+....+.. ...+.+++|+|+++++++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~-~~~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~ 277 (433)
T 3bws_A 200 TLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT-KLEIRKTDK-IGLPRGLLLSKDGKELYIAQFSASN 277 (433)
T ss_dssp TCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT-TEEEEECCC-CSEEEEEEECTTSSEEEEEEEESCT
T ss_pred CceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC-CcEEEEecC-CCCceEEEEcCCCCEEEEEECCCCc
Confidence 99999888888899999999999997667777899999999987 555666654 45689999999999999888
Q ss_pred ---cCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEE
Q psy6213 204 ---RDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAW 280 (330)
Q Consensus 204 ---~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 280 (330)
.||.|++||+++++. .....+...+..++|+|++++++++++ .++.|++||+.+++. ...+. +...+.+++|
T Consensus 278 ~~~~dg~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~g~~l~~~~~--~~~~v~v~d~~~~~~-~~~~~-~~~~~~~~~~ 352 (433)
T 3bws_A 278 QESGGGRLGIYSMDKEKL-IDTIGPPGNKRHIVSGNTENKIYVSDM--CCSKIEVYDLKEKKV-QKSIP-VFDKPNTIAL 352 (433)
T ss_dssp TCSCCEEEEEEETTTTEE-EEEEEEEECEEEEEECSSTTEEEEEET--TTTEEEEEETTTTEE-EEEEE-CSSSEEEEEE
T ss_pred cccCCCeEEEEECCCCcE-EeeccCCCCcceEEECCCCCEEEEEec--CCCEEEEEECCCCcE-EEEec-CCCCCCeEEE
Confidence 488999999998744 334455668899999999998888877 799999999997764 44444 6778999999
Q ss_pred ecCCCEEEEeec---------------CCeEeeeecc
Q psy6213 281 RGDPQLFIASSR---------------VSIIPRAKNI 302 (330)
Q Consensus 281 ~~~~~~l~s~~~---------------dg~i~iw~~~ 302 (330)
+|++++|++++. ||.|++|+..
T Consensus 353 s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~ 389 (433)
T 3bws_A 353 SPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTT 389 (433)
T ss_dssp CTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETT
T ss_pred cCCCCEEEEEecCCCccccccccccccceEEEEEECC
Confidence 999999988876 5799999853
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=7.4e-32 Score=227.76 Aligned_cols=279 Identities=12% Similarity=0.059 Sum_probs=214.7
Q ss_pred CcccceEEEEeeCCCe-eecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEE-EEcCCCcEEE
Q psy6213 3 YLSPVHKHGLKADNGL-AQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIA-TGATNGAVVV 78 (330)
Q Consensus 3 H~~~v~~~~~s~~~~~-~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-~~~~dg~i~i 78 (330)
+...+.+++|+|+|++ ++++ ++.|++||+.+++....+..+. .+.+++|+| ++++|+ +++.++.|++
T Consensus 30 ~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~--------~v~~~~~sp-dg~~l~~~~~~~~~v~v 100 (391)
T 1l0q_A 30 VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS--------SPQGVAVSP-DGKQVYVTNMASSTLSV 100 (391)
T ss_dssp CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS--------SEEEEEECT-TSSEEEEEETTTTEEEE
T ss_pred cCCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC--------CccceEECC-CCCEEEEEECCCCEEEE
Confidence 3456899999999997 3444 9999999999988776554332 368999999 777664 5567799999
Q ss_pred EECCCCCCCceeEEecccccceeEEEEEecCCCEE-EEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEE
Q psy6213 79 WNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWL-ISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFA 157 (330)
Q Consensus 79 w~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 157 (330)
||+.+ .+....+.. ...+.+++|+| +++.+ ++++.++.|++||+.+++.+..+..+ ..+.+++|+|+++++++
T Consensus 101 ~d~~~---~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~ 174 (391)
T 1l0q_A 101 IDTTS---NTVAGTVKT-GKSPLGLALSP-DGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYV 174 (391)
T ss_dssp EETTT---TEEEEEEEC-SSSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEE
T ss_pred EECCC---CeEEEEEeC-CCCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEE
Confidence 99987 566666554 45789999998 67766 78888999999999999888888754 56799999999997667
Q ss_pred EEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEe---cCCcEEEEeCCCCccccceeccccceEEEEE
Q psy6213 158 SVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS---RDKTIKVWDLSIKPSLEYSINTIASVSRIKW 234 (330)
Q Consensus 158 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 234 (330)
+++.++.|++||+++ .+....+. +...+.+++|+|+++++++++ .++.|++||+++++..... .....+.+++|
T Consensus 175 ~~~~~~~v~~~d~~~-~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~~~~~ 251 (391)
T 1l0q_A 175 ANFDSMSISVIDTVT-NSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARI-PVGPDPAGIAV 251 (391)
T ss_dssp EETTTTEEEEEETTT-TEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEE-ECCSSEEEEEE
T ss_pred EeCCCCEEEEEECCC-CeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEE-ecCCCccEEEE
Confidence 888999999999987 45555554 566889999999999999888 6899999999987544333 33456889999
Q ss_pred cCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeE---EEE------------EecCC----------CEEEE
Q psy6213 235 RPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVS---GLA------------WRGDP----------QLFIA 289 (330)
Q Consensus 235 ~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~---~~~------------~~~~~----------~~l~s 289 (330)
+|++++++++++ .++.|++||+.+++. +..+..|..+.. .+. |+.+. ..+..
T Consensus 252 s~dg~~l~~s~~--~d~~v~v~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~ 328 (391)
T 1l0q_A 252 TPDGKKVYVALS--FXNTVSVIDTATNTI-TATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTD 328 (391)
T ss_dssp CTTSSEEEEEET--TTTEEEEEETTTTEE-EEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEE
T ss_pred ccCCCEEEEEcC--CCCEEEEEECCCCcE-EEEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEe
Confidence 999998877777 699999999998765 555655543321 012 22211 34666
Q ss_pred eecCCeEeeeecc
Q psy6213 290 SSRVSIIPRAKNI 302 (330)
Q Consensus 290 ~~~dg~i~iw~~~ 302 (330)
.+.|...++|+..
T Consensus 329 ~~~~~~~~~W~~~ 341 (391)
T 1l0q_A 329 LSKDATEWKWDFG 341 (391)
T ss_dssp CCBSCSEEEEECS
T ss_pred CCCCceEEEEECC
Confidence 6778889999754
No 121
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=1.4e-33 Score=238.31 Aligned_cols=247 Identities=16% Similarity=0.202 Sum_probs=171.7
Q ss_pred CcccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecc-------cCCcEEEEEcCC
Q psy6213 3 YLSPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSC-------IEENHIATGATN 73 (330)
Q Consensus 3 H~~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~~~~~l~~~~~d 73 (330)
|.+.+....+.+++.+++++ |++|+|||.+.++....... .....+...|++++|+| .++++||+|+.|
T Consensus 88 ~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~--~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D 165 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVL--GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD 165 (393)
T ss_dssp ---------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEE--CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT
T ss_pred cCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeee--cccCCCCCceEEEEEccccccccCCCCCEEEEEECC
Confidence 33444445556667775555 99999999998765433221 12234455689999986 367899999999
Q ss_pred CcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeee-----------------
Q psy6213 74 GAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIF----------------- 136 (330)
Q Consensus 74 g~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~----------------- 136 (330)
++|+|||+.+ ......+..|...+.+++|+|.+..+|++++.|++|++||+++++.....
T Consensus 166 ~tv~~Wd~~~---~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~ 242 (393)
T 4gq1_A 166 CTLIIWRLTD---EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTL 242 (393)
T ss_dssp SEEEEEEEET---TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESG
T ss_pred CeEEEEECCC---CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccc
Confidence 9999999987 56777777899999999999955578999999999999999876543221
Q ss_pred --------ecCCCCeEEEEEc-CCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEE------------------
Q psy6213 137 --------HSNTESVRDVEFN-PHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFA------------------ 189 (330)
Q Consensus 137 --------~~~~~~v~~~~~~-~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~------------------ 189 (330)
.+|...+.++.|+ |++. .+++++.|+.+++||+.. .+....+..|...+..
T Consensus 243 ~~~~~~~~~~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (393)
T 4gq1_A 243 PLVNTCHSSGIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLFA-NNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLG 320 (393)
T ss_dssp GGC------CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSC
T ss_pred cceeeeecccccccceeeeeecCCCC-EEEEEeCCCCEEEEECcc-CCCCceEeeecCccccEEEccccccccccCccee
Confidence 3466778899987 6777 699999999999999986 3333333333333222
Q ss_pred EEEcC--CCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccC
Q psy6213 190 CDWHP--EHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260 (330)
Q Consensus 190 ~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~ 260 (330)
..++| ++.++++|+.||.|++||..+++.......+..+|.+++|+|+|++ +++++ ++.+.+|.+..
T Consensus 321 ~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~-LA~as---~~Gv~lvrL~g 389 (393)
T 4gq1_A 321 ACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSH-LAIAT---EGSVLLTRLMG 389 (393)
T ss_dssp CEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSE-EEEEE---SSEEEEEEEGG
T ss_pred EEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCE-EEEEe---CCCeEEEEEeC
Confidence 33333 3446777889999999999998777777888899999999999997 66666 67788887653
No 122
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=3.2e-32 Score=226.82 Aligned_cols=229 Identities=11% Similarity=0.150 Sum_probs=181.1
Q ss_pred cceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEE-EEEecCCcEEEEEeecC
Q psy6213 52 FSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWL-ISGSQDGTMRLFDIRCQ 130 (330)
Q Consensus 52 ~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l-~~~~~d~~i~i~d~~~~ 130 (330)
..|.+++|+| ++++|++|+.++ +++|++.. ....... +...+..+.+.+ +++.+ ++++.|+.|++||..++
T Consensus 20 ~~V~~v~fs~-dg~~la~g~~~~-~~iw~~~~---~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~d~~v~iWd~~~~ 91 (355)
T 3vu4_A 20 NPVTDYEFNQ-DQSCLILSTLKS-FEIYNVHP---VAHIMSQ--EMRHLSKVRMLH-RTNYVAFVTGVKEVVHIWDDVKK 91 (355)
T ss_dssp CCCCEEEECT-TSSEEEEECSSE-EEEEEETT---EEEEEEE--ECSCCCEEEECT-TSSEEEEECSSTTEEEEEETTTT
T ss_pred CceEEEEECC-CCCEEEEEcCCE-EEEEecCC---cceeeee--ecCCeEEEEEcC-CCCEEEEEECCccEEEEEECCCC
Confidence 4479999999 999999998775 78999876 4443332 223577888887 55655 67788899999999999
Q ss_pred ceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEE--EecCCcE
Q psy6213 131 ESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLAT--ASRDKTI 208 (330)
Q Consensus 131 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~--~~~dg~i 208 (330)
+.+..+. +..+|.+++++++. ++++ .++.|++||+.+..+.+..+.. +...+++++ .++++ |+.||.|
T Consensus 92 ~~~~~~~-~~~~v~~v~~~~~~---~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v 161 (355)
T 3vu4_A 92 QDVSRIK-VDAPVKDLFLSREF---IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQI 161 (355)
T ss_dssp EEEEEEE-CSSCEEEEEECSSE---EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCE
T ss_pred cEEEEEE-CCCceEEEEEcCCE---EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEE
Confidence 9988887 66799999999864 3333 4789999999985355555554 444566776 56666 5799999
Q ss_pred EEEeCCCCc----------------cccceeccccceEEEEEcCCCCeEEEEeecccCCe-EEEEEccCCCccceEee-c
Q psy6213 209 KVWDLSIKP----------------SLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSS-VNVWDIRRPYIPLASFT-E 270 (330)
Q Consensus 209 ~i~d~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~-i~i~d~~~~~~~~~~~~-~ 270 (330)
++||++++. .......|..+|.+++|+|++++ +++++ .|++ |++||+++++. +..+. +
T Consensus 162 ~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~-l~s~s--~d~~~v~iwd~~~~~~-~~~~~~g 237 (355)
T 3vu4_A 162 HITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDM-VATCS--QDGTIIRVFKTEDGVL-VREFRRG 237 (355)
T ss_dssp EEEECCC------------------CCEEECCCSSCEEEEEECTTSSE-EEEEE--TTCSEEEEEETTTCCE-EEEEECT
T ss_pred EEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCE-EEEEe--CCCCEEEEEECCCCcE-EEEEEcC
Confidence 999998764 14556678899999999999997 66666 6998 99999999876 67776 5
Q ss_pred -CCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 271 -HKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 271 -~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
|...|.+++|+|++++|++++.|+.|++|+..
T Consensus 238 ~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 238 LDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp TCCSCEEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred CCCCcEEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 99999999999999999999999999999864
No 123
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.9e-32 Score=226.67 Aligned_cols=241 Identities=15% Similarity=0.209 Sum_probs=192.4
Q ss_pred ccceeeeeecccC---CcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEe
Q psy6213 51 NFSCNDVAWSCIE---ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDI 127 (330)
Q Consensus 51 ~~~v~~~~~~~~~---~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~ 127 (330)
...|++++|+| + +++|++|+.||.|++||+.+.. ......+..|...|.+++|+| ++++|++++.||.|++||+
T Consensus 39 ~~~v~~~~~~~-~~~~g~~l~~~~~dg~i~iw~~~~~~-~~~~~~~~~h~~~v~~~~~~~-~~~~l~s~~~dg~v~iwd~ 115 (368)
T 3mmy_A 39 DDSIGCLSFSP-PTLPGNFLIAGSWANDVRCWEVQDSG-QTIPKAQQMHTGPVLDVCWSD-DGSKVFTASCDKTAKMWDL 115 (368)
T ss_dssp SSCEEEEEECC-TTSSSEEEEEEETTSEEEEEEECTTS-CEEEEEEEECSSCEEEEEECT-TSSEEEEEETTSEEEEEET
T ss_pred CCceEEEEEcC-CCCCceEEEEECCCCcEEEEEcCCCC-ceeEEEeccccCCEEEEEECc-CCCEEEEEcCCCcEEEEEc
Confidence 34479999999 6 6999999999999999998621 334467788999999999998 8999999999999999999
Q ss_pred ecCceeeeeecCCCCeEEEEE--cCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecC
Q psy6213 128 RCQESTKIFHSNTESVRDVEF--NPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRD 205 (330)
Q Consensus 128 ~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 205 (330)
++++... +..|...|.+++| +|++. ++++++.||.|++||+++ .+.+..+..+ ..+.++.+. +..+++++.+
T Consensus 116 ~~~~~~~-~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~-~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~ 189 (368)
T 3mmy_A 116 SSNQAIQ-IAQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRS-SNPMMVLQLP-ERCYCADVI--YPMAVVATAE 189 (368)
T ss_dssp TTTEEEE-EEECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSC-SSCSEEEECS-SCEEEEEEE--TTEEEEEEGG
T ss_pred CCCCcee-eccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCC-CcEEEEEecC-CCceEEEec--CCeeEEEeCC
Confidence 9888766 4559999999999 88887 699999999999999998 5666677655 456666666 4588899999
Q ss_pred CcEEEEeCCCCcccccee--ccccceEEEEEcCCCCe---EEEEeecccCCeEEEEEccCCC--ccceEeecCCC-----
Q psy6213 206 KTIKVWDLSIKPSLEYSI--NTIASVSRIKWRPQRKF---HLASCSLVVDSSVNVWDIRRPY--IPLASFTEHKD----- 273 (330)
Q Consensus 206 g~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~---l~~~~~~~~~~~i~i~d~~~~~--~~~~~~~~~~~----- 273 (330)
+.+++||++......... ........+.+.++... .+++++ .|+.|++||++... .....+..|..
T Consensus 190 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (368)
T 3mmy_A 190 RGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS--IEGRVAIHYINPPNPAKDNFTFKCHRSNGTNT 267 (368)
T ss_dssp GCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEE--TTSEEEEEESSCSCHHHHSEEEECSEEC----
T ss_pred CcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEec--CCCcEEEEecCCCCccccceeeeeeecccccc
Confidence 999999998764422222 23344555555544432 245555 69999999998774 23667777776
Q ss_pred -------CeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 274 -------VVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 274 -------~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
.|.+++|+|++++|++++.||.|++|+..
T Consensus 268 ~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~ 303 (368)
T 3mmy_A 268 SAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKD 303 (368)
T ss_dssp CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETT
T ss_pred cccccccceEEEEEecCCCEEEEEccCCeEEEEECC
Confidence 79999999999999999999999999865
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.1e-31 Score=214.84 Aligned_cols=276 Identities=11% Similarity=0.041 Sum_probs=183.9
Q ss_pred ceEEEEeeCCC-e--eecC-CCeEEEEEcCCc---ceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEE-E
Q psy6213 7 VHKHGLKADNG-L--AQPS-RNVFKIFLIKDT---EFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVV-V 78 (330)
Q Consensus 7 v~~~~~s~~~~-~--~~~g-d~~i~iw~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~-i 78 (330)
+.++-|-.-|- - +++. ...|++|+..++ ++.....++... |..+.+.|+..+++.++-.+=.+. +
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~-------v~~~~~~~~~~~~~~~~~~~~~~~~v 114 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVP-------VLQIVPVPDVYNLVCVALGNLEIREI 114 (356)
T ss_dssp EEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSC-------EEEECCCTTCCSCEEEEECSSSEEEE
T ss_pred EeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCce-------eEEEEEcCcccceeeeeeccccccce
Confidence 34444443332 2 3334 999999999997 666655555433 567777774455555443322221 2
Q ss_pred EECCCCCC---CceeEEecccccceeEEEEEecCCCEEEEEe--cCCcEEEEEe-ecCceeeeeecCCCCeEEEEEcC--
Q psy6213 79 WNLGQISR---SKQERVFNDHKRTVNKVSFHYVESNWLISGS--QDGTMRLFDI-RCQESTKIFHSNTESVRDVEFNP-- 150 (330)
Q Consensus 79 w~~~~~~~---~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~--~d~~i~i~d~-~~~~~~~~~~~~~~~v~~~~~~~-- 150 (330)
+-+.-... ........+|...+..+ + +++++.+++ .|+.|++|++ .+++.+..+..|...++.++|+|
T Consensus 115 ~sla~spd~~~~~~~l~s~g~~~~v~~l---~-~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~ 190 (356)
T 2w18_A 115 RALFCSSDDESEKQVLLKSGNIKAVLGL---T-KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQ 190 (356)
T ss_dssp EEECC------CCEEEEEEEEEEEEEEE---T-TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEE
T ss_pred EEEEECCCccccccEEEeCCCeEEEEec---C-CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccC
Confidence 22211100 11222223344444443 3 566566544 5999999999 45788888888999999999999
Q ss_pred -CCCcEEEEEecCCcEEEEecCCCccceeeeccCC---CCeEEEEEcCCCCEE------------EEEecCCcEEEEeCC
Q psy6213 151 -HSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHS---GPIFACDWHPEHAWL------------ATASRDKTIKVWDLS 214 (330)
Q Consensus 151 -~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~~i~~~~~~~~~~~l------------~~~~~dg~i~i~d~~ 214 (330)
+++ +|++++.|++|++||+++ ++.++++.+|. ..+.+++|+|+|.++ ++|+.|++|++||..
T Consensus 191 g~~~-~LaSgS~D~TIkIWDl~T-Gk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~ 268 (356)
T 2w18_A 191 GMQE-ALLGTTIMNNIVIWNLKT-GQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK 268 (356)
T ss_dssp TSTT-EEEEEETTSEEEEEETTT-CCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT
T ss_pred CCCc-eEEEecCCCcEEEEECCC-CcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC
Confidence 566 799999999999999998 67778887654 357778999999876 567889999999999
Q ss_pred CCccccce-----eccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeE-EEEEecCCCEEE
Q psy6213 215 IKPSLEYS-----INTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVS-GLAWRGDPQLFI 288 (330)
Q Consensus 215 ~~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~ 288 (330)
+++.+... .++...+.+..++ +. ++++++ .|++|+|||+.+++. +.++.+|...+. .++|+|||++|+
T Consensus 269 tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~-~lASgS--~DgTIkIWDl~tGk~-l~tL~gH~~~vvs~vafSPDG~~La 342 (356)
T 2w18_A 269 TTLSVGVMLYCLPPGQAGRFLEGDVK--DH-CAAAIL--TSGTIAIWDLLLGQC-TALLPPVSDQHWSFVKWSGTDSHLL 342 (356)
T ss_dssp TTEEEEEEEECCCTTCCCCEEEEEEE--TT-EEEEEE--TTSCEEEEETTTCSE-EEEECCC--CCCCEEEECSSSSEEE
T ss_pred CCEEEEEEEeeccCCCcceeEccccC--CC-EEEEEc--CCCcEEEEECCCCcE-EEEecCCCCCeEEEEEECCCCCEEE
Confidence 88543321 1233333333333 45 467777 799999999999986 888988887655 589999999999
Q ss_pred EeecCCeEeeeec
Q psy6213 289 ASSRVSIIPRAKN 301 (330)
Q Consensus 289 s~~~dg~i~iw~~ 301 (330)
+|+.|++|++|+.
T Consensus 343 SGS~D~TIklWd~ 355 (356)
T 2w18_A 343 AGQKDGNIFVYHY 355 (356)
T ss_dssp EECTTSCEEEEEE
T ss_pred EEECCCcEEEecC
Confidence 9999999999973
No 125
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=100.00 E-value=5.7e-31 Score=223.57 Aligned_cols=279 Identities=10% Similarity=0.016 Sum_probs=208.8
Q ss_pred ccceEEEEeeCCCe-eecC------CC----eEEEEEc--CCcceeee--eceeeccccccccceeeeeeccc-------
Q psy6213 5 SPVHKHGLKADNGL-AQPS------RN----VFKIFLI--KDTEFVET--HNLRVGKNINLNFSCNDVAWSCI------- 62 (330)
Q Consensus 5 ~~v~~~~~s~~~~~-~~~g------d~----~i~iw~~--~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~------- 62 (330)
+.+...+|.+.|.. +++| +| .+++||+ .+++.+.. +..+.... ..+++++.
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~d~~~~~~ 135 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWL-------RYAGHTASDEVFEKL 135 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGH-------HHHHHHHHHHHHHHH
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHH-------HHHHHHHHHHHHHHH
Confidence 46677788888875 4333 57 8999999 88876533 33333222 33333320
Q ss_pred ------CCcEEEEEcCC------CcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCC---cEEEEEe
Q psy6213 63 ------EENHIATGATN------GAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDG---TMRLFDI 127 (330)
Q Consensus 63 ------~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~---~i~i~d~ 127 (330)
.+..++.++.+ +.|++||++. .....+..|...+.+++|+| +++.|++++.++ .|++||+
T Consensus 136 ~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g----~~~~~l~~~~~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~ 210 (415)
T 2hqs_A 136 TGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG----YNQFVVHRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTL 210 (415)
T ss_dssp HSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS----CSCEEEEEESSCEEEEEECT-TSSEEEEEECTTSSCEEEEEET
T ss_pred cCCCCcCCCEEEEEEecCCCCccceEEEEcCCC----CCCEEEeCCCCcceeeEEcC-CCCEEEEEEecCCCcEEEEEEC
Confidence 15566666554 7999999975 34566677889999999999 899999998875 9999999
Q ss_pred ecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCc--EEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEec-
Q psy6213 128 RCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGT--IQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASR- 204 (330)
Q Consensus 128 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~- 204 (330)
++++.. .+..+...+.+++|+|+++.++++++.++. |++||++++ + ...+..|...+.+++|+|+|++|++++.
T Consensus 211 ~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~-~-~~~l~~~~~~~~~~~~spdg~~l~~~s~~ 287 (415)
T 2hqs_A 211 ANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASG-Q-IRQVTDGRSNNTEPTWFPDSQNLAFTSDQ 287 (415)
T ss_dssp TTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTC-C-EEECCCCSSCEEEEEECTTSSEEEEEECT
T ss_pred CCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCC-C-EEeCcCCCCcccceEECCCCCEEEEEECC
Confidence 988765 455677889999999999965557776665 999999873 3 3566778889999999999999988886
Q ss_pred CC--cEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEec
Q psy6213 205 DK--TIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRG 282 (330)
Q Consensus 205 dg--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~ 282 (330)
++ .|.+||+.+++. .....+...+..++|+|+|++++++.....+..|++||+.+++. ..+..+. .+.+++|+|
T Consensus 288 ~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~--~~l~~~~-~~~~~~~sp 363 (415)
T 2hqs_A 288 AGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV--QVLSSTF-LDETPSLAP 363 (415)
T ss_dssp TSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE--EECCCSS-SCEEEEECT
T ss_pred CCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE--EEecCCC-CcCCeEEcC
Confidence 44 678889887743 33334556788999999999877766511135899999998764 4455554 899999999
Q ss_pred CCCEEEEeecCC---eEeeeecc
Q psy6213 283 DPQLFIASSRVS---IIPRAKNI 302 (330)
Q Consensus 283 ~~~~l~s~~~dg---~i~iw~~~ 302 (330)
||++|++++.++ .|++|+..
T Consensus 364 dg~~l~~~s~~~~~~~l~~~d~~ 386 (415)
T 2hqs_A 364 NGTMVIYSSSQGMGSVLNLVSTD 386 (415)
T ss_dssp TSSEEEEEEEETTEEEEEEEETT
T ss_pred CCCEEEEEEcCCCccEEEEEECC
Confidence 999999998877 78888753
No 126
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1e-30 Score=216.83 Aligned_cols=208 Identities=16% Similarity=0.292 Sum_probs=176.1
Q ss_pred EEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecC----ceeeeeecCCCCeEEEEEcC--CCCcEEEEEecCCc
Q psy6213 91 RVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQ----ESTKIFHSNTESVRDVEFNP--HSPYAFASVSENGT 164 (330)
Q Consensus 91 ~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~dg~ 164 (330)
..+.+|.+.|.+++|+| ++++|++|+.||.|++||+.++ +....+..|...|.+++|+| ++. +|++++.||.
T Consensus 5 ~~~~gH~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~-~l~s~~~dg~ 82 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGR-IIASASYDKT 82 (351)
T ss_dssp CEECCCSSCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCS-EEEEEETTSC
T ss_pred ccCcccccceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCC-EEEEEcCCCe
Confidence 45678999999999999 8999999999999999999876 45667788999999999999 466 7999999999
Q ss_pred EEEEecCCCc--------cceeeeccCCCCeEEEEEcCC--CCEEEEEecCCcEEEEeCCCCcccccee-----------
Q psy6213 165 IQQWDVRRPE--------KCFYQFTAHSGPIFACDWHPE--HAWLATASRDKTIKVWDLSIKPSLEYSI----------- 223 (330)
Q Consensus 165 i~i~d~~~~~--------~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~----------- 223 (330)
|++||++++. +....+..|...|.+++|+|+ +++|++++.||.|++||+++.+......
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 162 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIP 162 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCC
T ss_pred EEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccc
Confidence 9999998743 446777889999999999999 9999999999999999998875433222
Q ss_pred --ccccceEEEEEcCC---CCeEEEEeecccCCeEEEEEccCCCc-cceEeecCCCCeEEEEEecCC----CEEEEeecC
Q psy6213 224 --NTIASVSRIKWRPQ---RKFHLASCSLVVDSSVNVWDIRRPYI-PLASFTEHKDVVSGLAWRGDP----QLFIASSRV 293 (330)
Q Consensus 224 --~~~~~v~~~~~~~~---~~~l~~~~~~~~~~~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~----~~l~s~~~d 293 (330)
.+...+.+++|+|+ +.. +++++ .++.+.+|+...+.. ....+.+|...|.+++|+|++ ++|++++.|
T Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~-l~~~~--~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~d 239 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFSPEK-LAVSA--LEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKD 239 (351)
T ss_dssp CSSCSCCCEEEEECCCSSSCCE-EEEEE--TTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETT
T ss_pred cCCcccceeEEEeccCCCCCcE-EEEec--CCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCC
Confidence 46678999999997 776 55555 589997777766653 256677899999999999998 899999999
Q ss_pred CeEeeeeccc
Q psy6213 294 SIIPRAKNIK 303 (330)
Q Consensus 294 g~i~iw~~~~ 303 (330)
|.|++|+...
T Consensus 240 g~i~iwd~~~ 249 (351)
T 3f3f_A 240 GRIRIFKITE 249 (351)
T ss_dssp SCEEEEEEEE
T ss_pred CeEEEEeCCC
Confidence 9999998654
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.98 E-value=1.2e-30 Score=209.04 Aligned_cols=188 Identities=12% Similarity=0.115 Sum_probs=144.3
Q ss_pred CCcEEEEEc--CCCcEEEEECCCCCCCceeEEecccccceeEEEEEe--cCCCEEEEEecCCcEEEEEeecCceeeeeec
Q psy6213 63 EENHIATGA--TNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHY--VESNWLISGSQDGTMRLFDIRCQESTKIFHS 138 (330)
Q Consensus 63 ~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~--~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (330)
+++++.+++ .|+.|++|++... ++....+..|...+..++|+| .++.+|++++.|++|++||+++++.++++.+
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~d--G~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g 221 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAED--GGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHI 221 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTT--SCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCcEEEecccCCCCcEEEEEECCC--CceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcC
Confidence 666666644 5999999999553 566677778988888888887 3579999999999999999999999999986
Q ss_pred CC---CCeEEEEEcCCCCcE-----------EEEEecCCcEEEEecCCCccceeee-----ccCCCCeEEEEEcCCCCEE
Q psy6213 139 NT---ESVRDVEFNPHSPYA-----------FASVSENGTIQQWDVRRPEKCFYQF-----TAHSGPIFACDWHPEHAWL 199 (330)
Q Consensus 139 ~~---~~v~~~~~~~~~~~~-----------~~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~~i~~~~~~~~~~~l 199 (330)
|. ..+.+++|+|++..+ +++|+.|++|++||..+ ++.+..+ .+|...+.+..++ +.++
T Consensus 222 ~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t-gk~l~v~~~~~p~Gh~~~~lsg~~s--g~~l 298 (356)
T 2w18_A 222 DDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT-TLSVGVMLYCLPPGQAGRFLEGDVK--DHCA 298 (356)
T ss_dssp CC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT-TEEEEEEEECCCTTCCCCEEEEEEE--TTEE
T ss_pred CCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC-CEEEEEEEeeccCCCcceeEccccC--CCEE
Confidence 54 367788999999743 36788999999999987 4544433 3565555444444 7899
Q ss_pred EEEecCCcEEEEeCCCCccccceeccccce-EEEEEcCCCCeEEEEeecccCCeEEEEEc
Q psy6213 200 ATASRDKTIKVWDLSIKPSLEYSINTIASV-SRIKWRPQRKFHLASCSLVVDSSVNVWDI 258 (330)
Q Consensus 200 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~~~~~l~~~~~~~~~~~i~i~d~ 258 (330)
++++.|++|+|||+.+++......+|...+ ..++|+|+|++ +++++ .|++|+|||+
T Consensus 299 ASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~-LaSGS--~D~TIklWd~ 355 (356)
T 2w18_A 299 AAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSH-LLAGQ--KDGNIFVYHY 355 (356)
T ss_dssp EEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSE-EEEEC--TTSCEEEEEE
T ss_pred EEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCE-EEEEE--CCCcEEEecC
Confidence 999999999999999997777666666554 46899999997 55666 6999999996
No 128
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.97 E-value=5.6e-28 Score=199.40 Aligned_cols=278 Identities=8% Similarity=0.066 Sum_probs=198.5
Q ss_pred EEEeeCCCe-e-ecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcC-CCcEEEEECCCCC
Q psy6213 10 HGLKADNGL-A-QPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGAT-NGAVVVWNLGQIS 85 (330)
Q Consensus 10 ~~~s~~~~~-~-~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~ 85 (330)
..|.+++.+ + +.+ ++.|.+||.++++.......+. ..+ .++|+| +++++++++. ++.|.+||..+
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~-------~~~-~~~~s~-dg~~l~~~~~~~~~i~~~d~~~-- 71 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGY-------DFV-DTAITS-DCSNVVVTSDFCQTLVQIETQL-- 71 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCC-------CEE-EEEECS-SSCEEEEEESTTCEEEEEECSS--
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccC-------Ccc-eEEEcC-CCCEEEEEeCCCCeEEEEECCC--
Confidence 346666666 4 444 9999999999988766554321 124 899999 8876655554 88999999987
Q ss_pred CCce-eEEecccccceeEEEEEecCCCEEEEEecCC---cEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEec
Q psy6213 86 RSKQ-ERVFNDHKRTVNKVSFHYVESNWLISGSQDG---TMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSE 161 (330)
Q Consensus 86 ~~~~-~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 161 (330)
.+. ...+..+..+..+++|+| ++++++++..++ .|.+||+.+++.+..+.. .....+++|+|++++++++...
T Consensus 72 -~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~ 148 (331)
T 3u4y_A 72 -EPPKVVAIQEGQSSMADVDITP-DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLILIDRS 148 (331)
T ss_dssp -SSCEEEEEEECSSCCCCEEECT-TSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEEEEET
T ss_pred -CceeEEecccCCCCccceEECC-CCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEEEecC
Confidence 444 555666666666699998 888888555553 899999999988887764 4457899999999977777777
Q ss_pred CCc-EEEEecCCCccce---eeeccCCCCeEEEEEcCCCCEEEEEe-cCCcEEEEeCCCCccc--cceeccccceEEEEE
Q psy6213 162 NGT-IQQWDVRRPEKCF---YQFTAHSGPIFACDWHPEHAWLATAS-RDKTIKVWDLSIKPSL--EYSINTIASVSRIKW 234 (330)
Q Consensus 162 dg~-i~i~d~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~--~~~~~~~~~v~~~~~ 234 (330)
++. |.+|++...+... .........+..++|+|+|+++++++ .++.|.+||+.+++.. .........+..++|
T Consensus 149 ~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~ 228 (331)
T 3u4y_A 149 SANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVV 228 (331)
T ss_dssp TTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEE
T ss_pred CCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEE
Confidence 788 9999988643321 11123445689999999999665554 6889999999887541 233344567889999
Q ss_pred cCCCCeEEEEeecccCCeEEEEEccCCCcc-ceEeecC----CC---CeEEEEEecCCCEEEEeec-CCeEeeeeccc
Q psy6213 235 RPQRKFHLASCSLVVDSSVNVWDIRRPYIP-LASFTEH----KD---VVSGLAWRGDPQLFIASSR-VSIIPRAKNIK 303 (330)
Q Consensus 235 ~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~-~~~~~~~----~~---~v~~~~~~~~~~~l~s~~~-dg~i~iw~~~~ 303 (330)
+|+|++++++.. .++.|.+||+.+++.. +..+..+ .. ....++|+||+++|++++. ++.|.+|+...
T Consensus 229 spdg~~l~v~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~ 304 (331)
T 3u4y_A 229 SRDGSTVYVLTE--STVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISG 304 (331)
T ss_dssp CTTSSEEEEECS--SEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTS
T ss_pred CCCCCEEEEEEc--CCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecC
Confidence 999998777765 5889999999877531 1122211 11 2356899999998866554 56999998654
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=1.7e-28 Score=208.38 Aligned_cols=237 Identities=14% Similarity=0.122 Sum_probs=181.5
Q ss_pred CeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCC---cEEEEECCCCCCCceeEEecccccce
Q psy6213 24 NVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNG---AVVVWNLGQISRSKQERVFNDHKRTV 100 (330)
Q Consensus 24 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~i~iw~~~~~~~~~~~~~~~~~~~~i 100 (330)
+.|++||++.+. ...+..+. ..+.+++|+| +++.|++++.++ .|++||+.+ ++. ..+..|...+
T Consensus 159 ~~i~i~d~~g~~-~~~l~~~~-------~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~t---g~~-~~l~~~~~~~ 225 (415)
T 2hqs_A 159 YELRVSDYDGYN-QFVVHRSP-------QPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLAN---GAV-RQVASFPRHN 225 (415)
T ss_dssp EEEEEEETTSCS-CEEEEEES-------SCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTT---CCE-EEEECCSSCE
T ss_pred ceEEEEcCCCCC-CEEEeCCC-------CcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCC---CcE-EEeecCCCcc
Confidence 799999998544 33333222 2368999999 999999998875 899999987 444 3466678899
Q ss_pred eEEEEEecCCCEEE-EEecCCc--EEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEec-CC--cEEEEecCCCc
Q psy6213 101 NKVSFHYVESNWLI-SGSQDGT--MRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSE-NG--TIQQWDVRRPE 174 (330)
Q Consensus 101 ~~i~~~~~~~~~l~-~~~~d~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-dg--~i~i~d~~~~~ 174 (330)
.+++|+| +++.|+ +++.++. |++||+.+++. ..+..+...+.+++|+|++++ |++++. ++ .|++||+.++
T Consensus 226 ~~~~~sp-dg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~-l~~~s~~~g~~~i~~~d~~~~- 301 (415)
T 2hqs_A 226 GAPAFSP-DGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQN-LAFTSDQAGRPQVYKVNINGG- 301 (415)
T ss_dssp EEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSE-EEEEECTTSSCEEEEEETTSS-
T ss_pred cCEEEcC-CCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCE-EEEEECCCCCcEEEEEECCCC-
Confidence 9999999 788776 6666654 99999988765 556667888999999999996 555544 55 5777788763
Q ss_pred cceeeeccCCCCeEEEEEcCCCCEEEEEecC---CcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCC
Q psy6213 175 KCFYQFTAHSGPIFACDWHPEHAWLATASRD---KTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDS 251 (330)
Q Consensus 175 ~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~ 251 (330)
+ ...+..+...+.+++|+|+|++|++++.+ ..|++||+.+++.. ....+ ..+..++|+|+|++++.++. .++
T Consensus 302 ~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~-~~~~~~~~spdg~~l~~~s~--~~~ 376 (415)
T 2hqs_A 302 A-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSST-FLDETPSLAPNGTMVIYSSS--QGM 376 (415)
T ss_dssp C-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCS-SSCEEEEECTTSSEEEEEEE--ETT
T ss_pred C-EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCC-CCcCCeEEcCCCCEEEEEEc--CCC
Confidence 2 34455567788999999999999988864 58999999987543 22333 38999999999998777765 333
Q ss_pred --eEEEEEccCCCccceEeecCCCCeEEEEEecCC
Q psy6213 252 --SVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDP 284 (330)
Q Consensus 252 --~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 284 (330)
.|++||+.... ...+..|.+.|.+++|+|..
T Consensus 377 ~~~l~~~d~~g~~--~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 377 GSVLNLVSTDGRF--KARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp EEEEEEEETTSCC--EEECCCSSSEEEEEEECCCC
T ss_pred ccEEEEEECCCCc--EEEeeCCCCCCcCCcccccc
Confidence 89999987553 67788899999999999954
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=6.8e-28 Score=210.72 Aligned_cols=276 Identities=10% Similarity=0.055 Sum_probs=211.9
Q ss_pred EEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEEC--CCCCC
Q psy6213 11 GLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNL--GQISR 86 (330)
Q Consensus 11 ~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~--~~~~~ 86 (330)
+|+|++.+++++ ++.|.+||..+++....+.... .+..++|+| ++++|++++.|+.|.+||+ .+
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~--------~~~~v~~sp-dg~~l~v~~~d~~V~v~D~~~~t--- 211 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY--------AVHISRMSA-SGRYLLVIGRDARIDMIDLWAKE--- 211 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECST--------TEEEEEECT-TSCEEEEEETTSEEEEEETTSSS---
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCc--------ccceEEECC-CCCEEEEECCCCeEEEEECcCCC---
Confidence 488999885555 9999999999998876654321 147899999 9999999999999999999 55
Q ss_pred CceeEEecccccceeEEEEEec---CCCEEEEEe-cCCcEEEEEeecCceeeeeecC-----------CCCeEEEEEcCC
Q psy6213 87 SKQERVFNDHKRTVNKVSFHYV---ESNWLISGS-QDGTMRLFDIRCQESTKIFHSN-----------TESVRDVEFNPH 151 (330)
Q Consensus 87 ~~~~~~~~~~~~~i~~i~~~~~---~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~-----------~~~v~~~~~~~~ 151 (330)
.+.+..+. +...+..++|+|. +++++++++ .+++|.+||..+++++..+..+ ...+..+.++|+
T Consensus 212 ~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~ 290 (543)
T 1nir_A 212 PTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE 290 (543)
T ss_dssp CEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSS
T ss_pred CcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCC
Confidence 56666666 4456799999971 567777776 5899999999999988877642 236889999999
Q ss_pred CCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEe-cCCcEEEEeCCCCcccccee----ccc
Q psy6213 152 SPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS-RDKTIKVWDLSIKPSLEYSI----NTI 226 (330)
Q Consensus 152 ~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~----~~~ 226 (330)
++.++++...++.|.+||..+..........+...+..+.|+|+|+++++++ .+++|.+||..+++...... +|.
T Consensus 291 ~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~ 370 (543)
T 1nir_A 291 HPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHP 370 (543)
T ss_dssp SSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCC
T ss_pred CCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCC
Confidence 9888888889999999999874332212223566788999999999876655 58899999999985543332 133
Q ss_pred cceEEEEEcCCCCeEEEEeecccCCeEEEEEccC-------CCccceEeecCCCCeEEEEEecCCCEEEEee-------c
Q psy6213 227 ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR-------PYIPLASFTEHKDVVSGLAWRGDPQLFIASS-------R 292 (330)
Q Consensus 227 ~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-------~ 292 (330)
.....+ ++|++..+++++.. .+++|.+||+.+ .+. ++.+..|...+..++++|++++|++++ .
T Consensus 371 g~g~~~-~~p~~g~~~~s~~~-~d~~V~v~d~~~~~~~~~~~~~-v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~ 447 (543)
T 1nir_A 371 GRGANF-VHPKYGPVWSTSHL-GDGSISLIGTDPKNHPQYAWKK-VAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARI 447 (543)
T ss_dssp TTCEEE-EETTTEEEEEEEBS-SSSEEEEEECCTTTCTTTBTSE-EEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHH
T ss_pred CCCccc-CCCCCccEEEeccC-CCceEEEEEeCCCCCchhcCeE-EEEEEcCCCCceEEEcCCCCCcEEEecCCCCCccc
Confidence 333333 57875555666531 379999999987 444 888999988899999999999999987 3
Q ss_pred CCeEeeeecc
Q psy6213 293 VSIIPRAKNI 302 (330)
Q Consensus 293 dg~i~iw~~~ 302 (330)
+++|.+|+..
T Consensus 448 ~~~v~v~d~~ 457 (543)
T 1nir_A 448 SQSVAVFDLK 457 (543)
T ss_dssp HTCEEEEETT
T ss_pred CceEEEEECC
Confidence 7899999854
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=6.8e-28 Score=210.72 Aligned_cols=282 Identities=13% Similarity=0.129 Sum_probs=210.9
Q ss_pred ceEEEEeeCCCe-eecC-CCeEEEEEc--CCcceeeeeceeeccccccccceeeeeeccc---CCcEEEEEc-CCCcEEE
Q psy6213 7 VHKHGLKADNGL-AQPS-RNVFKIFLI--KDTEFVETHNLRVGKNINLNFSCNDVAWSCI---EENHIATGA-TNGAVVV 78 (330)
Q Consensus 7 v~~~~~s~~~~~-~~~g-d~~i~iw~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~~-~dg~i~i 78 (330)
+.+++|+|||++ ++++ |+.|.+||+ .+++....+.. + ..+..++|+|. +++++++++ .++.|.+
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~--g------~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v 252 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI--G------IEARSVESSKFKGYEDRYTIAGAYWPPQFAI 252 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC--C------SEEEEEEECCSTTCTTTEEEEEEEESSEEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec--C------CCcceEEeCCCcCCCCCEEEEEEccCCeEEE
Confidence 789999999999 5555 999999999 67666554432 1 12488999972 567777776 5899999
Q ss_pred EECCCCCCCceeEEecc----------cc-cceeEEEEEecCCCEEEEEecCCcEEEEEeecCceee--eeecCCCCeEE
Q psy6213 79 WNLGQISRSKQERVFND----------HK-RTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTK--IFHSNTESVRD 145 (330)
Q Consensus 79 w~~~~~~~~~~~~~~~~----------~~-~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~v~~ 145 (330)
||..+ .+.+..+.. |. ..+..+.++|+++.++++...++.|.+||..+.+.+. .+. +...+..
T Consensus 253 ~D~~t---~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~ 328 (543)
T 1nir_A 253 MDGET---LEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHD 328 (543)
T ss_dssp EETTT---CCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCC
T ss_pred Eeccc---cccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccC
Confidence 99987 566666543 22 3688999999666677788889999999998766544 343 5667889
Q ss_pred EEEcCCCCcEEEEEecCCcEEEEecCCCccceeeecc----CCCCeEEEEEcCC-CCEEEEEe-cCCcEEEEeCCC----
Q psy6213 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA----HSGPIFACDWHPE-HAWLATAS-RDKTIKVWDLSI---- 215 (330)
Q Consensus 146 ~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~~i~~~~~~~~-~~~l~~~~-~dg~i~i~d~~~---- 215 (330)
++|+|+++++++++..+++|.+||+.+ ++....+.. |.+....+ ++|+ +..++++. .|++|.+||..+
T Consensus 329 ~~~spdg~~l~va~~~~~~v~v~D~~t-g~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~ 406 (543)
T 1nir_A 329 GGWDSSHRYFMTAANNSNKVAVIDSKD-RRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHP 406 (543)
T ss_dssp EEECTTSCEEEEEEGGGTEEEEEETTT-TEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCT
T ss_pred ceECCCCCEEEEEecCCCeEEEEECCC-CeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCc
Confidence 999999997677777789999999998 566665553 55443333 4677 56666665 589999999987
Q ss_pred ---CccccceeccccceEEEEEcCCCCeEEEEeecc----cCCeEEEEEccCCCccceEe--------ecCCCCeEEEEE
Q psy6213 216 ---KPSLEYSINTIASVSRIKWRPQRKFHLASCSLV----VDSSVNVWDIRRPYIPLASF--------TEHKDVVSGLAW 280 (330)
Q Consensus 216 ---~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~----~~~~i~i~d~~~~~~~~~~~--------~~~~~~v~~~~~ 280 (330)
.+.+.....+...+..++++|++++|.+..... .+++|.+||+.+.+.....+ ..+...+..+.|
T Consensus 407 ~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 486 (543)
T 1nir_A 407 QYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEY 486 (543)
T ss_dssp TTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEE
T ss_pred hhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccC
Confidence 545555555667788899999999866654100 16799999999887643443 355678999999
Q ss_pred ecCCCEEEEee-----cCCeEeeeecc
Q psy6213 281 RGDPQLFIASS-----RVSIIPRAKNI 302 (330)
Q Consensus 281 ~~~~~~l~s~~-----~dg~i~iw~~~ 302 (330)
+|+|+.|+.+. .|+.|.||+..
T Consensus 487 ~~~g~~~~~s~~~~~~~~~~i~v~D~~ 513 (543)
T 1nir_A 487 NKRGDEVWFSVWNGKNDSSALVVVDDK 513 (543)
T ss_dssp CSSSSEEEEEEECCTTSCCEEEEEETT
T ss_pred CCCCCEEEEEeecCCCCCCeEEEEECC
Confidence 99999999763 47999999754
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.97 E-value=4.7e-27 Score=194.64 Aligned_cols=270 Identities=10% Similarity=0.117 Sum_probs=186.4
Q ss_pred eec-C-CCeEEEEEcCC-cceeeeeceeeccccccccceeeeeecccCCcEEEEEcCC-CcEEEEECCCC-CCCceeEEe
Q psy6213 19 AQP-S-RNVFKIFLIKD-TEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATN-GAVVVWNLGQI-SRSKQERVF 93 (330)
Q Consensus 19 ~~~-g-d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-g~i~iw~~~~~-~~~~~~~~~ 93 (330)
+++ + ++.|++|+++. ++........ ....+.+++|+| ++++|++++.+ +.|.+|++... ........+
T Consensus 8 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 80 (343)
T 1ri6_A 8 YIASPESQQIHVWNLNHEGALTLTQVVD------VPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAES 80 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEE------CSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE
T ss_pred EEeCCCCCeEEEEEECCCCcEEEeeeEe------cCCCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCceeecccc
Confidence 444 5 99999999963 3322221111 122358899999 88888888776 89999999721 122334444
Q ss_pred cccccceeEEEEEecCCCEEEEEe-cCCcEEEEEe---ecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEe
Q psy6213 94 NDHKRTVNKVSFHYVESNWLISGS-QDGTMRLFDI---RCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWD 169 (330)
Q Consensus 94 ~~~~~~i~~i~~~~~~~~~l~~~~-~d~~i~i~d~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d 169 (330)
..+. .+..++|+| +++++++++ .++.|.+||+ ...+....+. ....+.+++|+|++++++++...++.|++||
T Consensus 81 ~~~~-~~~~~~~s~-dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 157 (343)
T 1ri6_A 81 ALPG-SLTHISTDH-QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFT 157 (343)
T ss_dssp ECSS-CCSEEEECT-TSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEE
T ss_pred ccCC-CCcEEEEcC-CCCEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEE
Confidence 4433 789999998 777776665 4889999999 4444455554 3346889999999996544444899999999
Q ss_pred cCCCcccee----eecc-CCCCeEEEEEcCCCCEEEEEe-cCCcEEEEeCCC--Ccc--cccee--c----cccceEEEE
Q psy6213 170 VRRPEKCFY----QFTA-HSGPIFACDWHPEHAWLATAS-RDKTIKVWDLSI--KPS--LEYSI--N----TIASVSRIK 233 (330)
Q Consensus 170 ~~~~~~~~~----~~~~-~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~--~~~--~~~~~--~----~~~~v~~~~ 233 (330)
+.+.++... .... ....+..++|+|+++++++++ .++.+.+||+.. ++. ..... . ....+..++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ 237 (343)
T 1ri6_A 158 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIH 237 (343)
T ss_dssp ECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEE
T ss_pred ecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceE
Confidence 986333221 2222 345788999999999776555 789999999964 221 11111 1 123567899
Q ss_pred EcCCCCeEEEEeecccCCeEEEEEccC--CC-ccceEeecCCCCeEEEEEecCCCEEEEee-cCCeEeeeec
Q psy6213 234 WRPQRKFHLASCSLVVDSSVNVWDIRR--PY-IPLASFTEHKDVVSGLAWRGDPQLFIASS-RVSIIPRAKN 301 (330)
Q Consensus 234 ~~~~~~~l~~~~~~~~~~~i~i~d~~~--~~-~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~iw~~ 301 (330)
|+|++++++++.. .++.|.+||+.. +. ..+..+..+.. +.+++|+|++++|++++ .++.+.+|+.
T Consensus 238 ~s~dg~~l~v~~~--~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~ 306 (343)
T 1ri6_A 238 ITPDGRHLYACDR--TASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEI 306 (343)
T ss_dssp ECTTSSEEEEEET--TTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEE
T ss_pred ECCCCCEEEEEec--CCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEE
Confidence 9999998877776 699999999983 22 22334444444 88999999999888887 6899999954
No 133
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.97 E-value=8.1e-27 Score=194.07 Aligned_cols=270 Identities=9% Similarity=0.033 Sum_probs=204.0
Q ss_pred cccceEEEEeeCCCe-eecC--------CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcE-EEEEcCC
Q psy6213 4 LSPVHKHGLKADNGL-AQPS--------RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENH-IATGATN 73 (330)
Q Consensus 4 ~~~v~~~~~s~~~~~-~~~g--------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-l~~~~~d 73 (330)
...+..++|+|+|++ ++++ ++.|.+||..+++....+.... .+..++|+| ++++ +++...+
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~--------~~~~~~~s~-dg~~l~v~~~~~ 110 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDL--------KPFGATINN-TTQTLWFGNTVN 110 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESS--------CCCSEEEET-TTTEEEEEETTT
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCC--------CcceEEECC-CCCEEEEEecCC
Confidence 356788999999988 4433 3489999999988776654321 147899999 7774 4555667
Q ss_pred CcEEEEECCCCCCCceeEEeccccc---------ceeEEEEEecCCCEEEEEe--cCCcEEEEEeecCceeeeeecCCCC
Q psy6213 74 GAVVVWNLGQISRSKQERVFNDHKR---------TVNKVSFHYVESNWLISGS--QDGTMRLFDIRCQESTKIFHSNTES 142 (330)
Q Consensus 74 g~i~iw~~~~~~~~~~~~~~~~~~~---------~i~~i~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~ 142 (330)
+.|.+||..+ .+....+..+.. .+.+++|+| +++.+++++ .++.|.+||..+++....+..+...
T Consensus 111 ~~v~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 186 (353)
T 3vgz_A 111 SAVTAIDAKT---GEVKGRLVLDDRKRTEEVRPLQPRELVADD-ATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKM 186 (353)
T ss_dssp TEEEEEETTT---CCEEEEEESCCCCCCSSCCCCEEEEEEEET-TTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTT
T ss_pred CEEEEEeCCC---CeeEEEEecCCCccccccCCCCCceEEECC-CCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCc
Confidence 9999999987 555555554332 268899998 777666665 4788999999999988888755666
Q ss_pred eEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeecc----CCCCeEEEEEcCCCCEEEEEec-CCcEEEEeCCCCc
Q psy6213 143 VRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA----HSGPIFACDWHPEHAWLATASR-DKTIKVWDLSIKP 217 (330)
Q Consensus 143 v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~ 217 (330)
+..++|+|++++ +++++.++.|.+||+.+ .+....+.. +...+..++|+|+++++++++. ++.|.+||..+++
T Consensus 187 ~~~~~~s~dg~~-l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 187 STGLALDSEGKR-LYTTNADGELITIDTAD-NKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN 264 (353)
T ss_dssp CCCCEEETTTTE-EEEECTTSEEEEEETTT-TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC
T ss_pred cceEEECCCCCE-EEEEcCCCeEEEEECCC-CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 889999999994 77778899999999987 444444443 4556788999999997776665 4899999998875
Q ss_pred cccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCC
Q psy6213 218 SLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVS 294 (330)
Q Consensus 218 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 294 (330)
....... .. ...++|+|++++++++.. .++.|.+||..+++. +..+.. ...+.+++|+|||++|+.+..++
T Consensus 265 ~~~~~~~-~~-~~~~~~s~dg~~l~v~~~--~~~~v~~~d~~~~~~-~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 265 ILAKVAA-PE-SLAVLFNPARNEAYVTHR--QAGKVSVIDAKSYKV-VKTFDT-PTHPNSLALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEEEEEC-SS-CCCEEEETTTTEEEEEET--TTTEEEEEETTTTEE-EEEEEC-CSEEEEEEECTTSCEEEEEEECC
T ss_pred EEEEEEc-CC-CceEEECCCCCEEEEEEC--CCCeEEEEECCCCeE-EEEEec-CCCCCeEEEcCCCCEEEEEEccc
Confidence 4433322 22 356999999998777776 689999999988865 555544 34689999999999888777664
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.97 E-value=1.1e-27 Score=194.01 Aligned_cols=257 Identities=12% Similarity=0.128 Sum_probs=190.3
Q ss_pred CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEeccc-cccee
Q psy6213 23 RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDH-KRTVN 101 (330)
Q Consensus 23 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~i~ 101 (330)
++.|++||+.+++...... + ...+.+++|+| ++++|++++ ++.|.+||+.+. .+.......+ ...+.
T Consensus 21 ~~~i~~~d~~~~~~~~~~~-~-------~~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~--~~~~~~~~~~~~~~~~ 88 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQ-T-------PELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGD--PSPEKVDTGFATICNN 88 (297)
T ss_dssp CEEEEEEETTTTEEEEEEE-E-------SSCCEEEEECT-TSSEEEEEE-TTEEEEEESSSC--CSCEECCCTTCCCBCS
T ss_pred ceeEEEEeCCCCceeeecc-C-------CcceEeeEECC-CCCEEEEEc-CCeEEEEeCCCC--CCceEecccccccccc
Confidence 8999999999887653322 2 22368999999 999999886 789999999761 1222333344 47789
Q ss_pred EEEEEecCCCEEEEEe--cCCcEEEEEee--cCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccce
Q psy6213 102 KVSFHYVESNWLISGS--QDGTMRLFDIR--CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCF 177 (330)
Q Consensus 102 ~i~~~~~~~~~l~~~~--~d~~i~i~d~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~ 177 (330)
+++|+| ++++|++++ .++...+|.++ +++ ...+.. ...+..++|+|+++++++++..++.+++|+++......
T Consensus 89 ~~~~sp-dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~ 165 (297)
T 2ojh_A 89 DHGISP-DGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE 165 (297)
T ss_dssp CCEECT-TSSEEEEEECTTTSSCEEEEEETTCCC-CEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE
T ss_pred ceEECC-CCCEEEEEEeCCCCcceEEEEECCCCc-eEEeec-CCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc
Confidence 999999 889999988 33556666554 333 334443 34588999999999766688899999999976434445
Q ss_pred eeeccCCCCeEEEEEcCCCCEEEEEe-cCCcEEEEeCC-CCccccceeccccceEEEEEcCCCCeEEEEeecc-------
Q psy6213 178 YQFTAHSGPIFACDWHPEHAWLATAS-RDKTIKVWDLS-IKPSLEYSINTIASVSRIKWRPQRKFHLASCSLV------- 248 (330)
Q Consensus 178 ~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~------- 248 (330)
..+..+...+.+++|+|++++|+.++ .++.+++|++. ..........+...+..++|+|+++++++++...
T Consensus 166 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 245 (297)
T 2ojh_A 166 TRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPR 245 (297)
T ss_dssp EECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCS
T ss_pred eEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccc
Confidence 66677888999999999999888766 58999999986 3334444555667899999999999876666510
Q ss_pred -cCCeEEEEEccCCCc-cceEeecCCCCeEEEEEecCCCEEEEeecCC
Q psy6213 249 -VDSSVNVWDIRRPYI-PLASFTEHKDVVSGLAWRGDPQLFIASSRVS 294 (330)
Q Consensus 249 -~~~~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 294 (330)
.++.|++||+.+++. .+..+.+|...+.+++|+|+++.|++++.+.
T Consensus 246 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 246 DLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp SEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred cCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 015799999987754 2333457888999999999999999888764
No 135
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=4.9e-28 Score=220.76 Aligned_cols=287 Identities=10% Similarity=0.040 Sum_probs=205.1
Q ss_pred cccceEEEEeeCCCeeecC---CC-----eEEEEEcCCcceeeeeceeeccc---------------c--ccccceeeee
Q psy6213 4 LSPVHKHGLKADNGLAQPS---RN-----VFKIFLIKDTEFVETHNLRVGKN---------------I--NLNFSCNDVA 58 (330)
Q Consensus 4 ~~~v~~~~~s~~~~~~~~g---d~-----~i~iw~~~~~~~~~~~~~~~~~~---------------~--~~~~~v~~~~ 58 (330)
...+.+++|+|||++++.+ |+ .|++||+++++.......+.... . .....+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 3568999999999995443 66 89999999988665554332110 0 0002368899
Q ss_pred ecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeec
Q psy6213 59 WSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHS 138 (330)
Q Consensus 59 ~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (330)
|+| ++++|++++. +.|.+||+.+... .....+..+...+..++|+| ++++|+.++ ++.|++||+.+++.......
T Consensus 116 ~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~-~~~~~l~~~~~~~~~~~~SP-DG~~la~~~-~~~i~~~d~~~g~~~~~~~~ 190 (741)
T 2ecf_A 116 WSP-DAQRLLFPLG-GELYLYDLKQEGK-AAVRQLTHGEGFATDAKLSP-KGGFVSFIR-GRNLWVIDLASGRQMQLTAD 190 (741)
T ss_dssp ECT-TSSEEEEEET-TEEEEEESSSCST-TSCCBCCCSSSCEEEEEECT-TSSEEEEEE-TTEEEEEETTTTEEEECCCC
T ss_pred ECC-CCCEEEEEeC-CcEEEEECCCCCc-ceEEEcccCCcccccccCCC-CCCEEEEEe-CCcEEEEecCCCCEEEeccC
Confidence 999 9999998886 8999999987210 03344666778899999999 899998887 56999999998876655443
Q ss_pred CCCC----------------eEEEEEcCCCCcEEEEEecCC---------------------------------cEEEEe
Q psy6213 139 NTES----------------VRDVEFNPHSPYAFASVSENG---------------------------------TIQQWD 169 (330)
Q Consensus 139 ~~~~----------------v~~~~~~~~~~~~~~~~~~dg---------------------------------~i~i~d 169 (330)
+... +..++|+|+|++ |++++.|+ .|++||
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~-l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSA-IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSC-EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred CccceeccccceeeeeccccccceEECCCCCE-EEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 3332 478999999996 66665544 788899
Q ss_pred cCC-Cccceeeec-cCCCCeEEEEEcCCCCEEEEEec-----CCcEEEEeCCCCccccceecccc----ceEEEEEcCCC
Q psy6213 170 VRR-PEKCFYQFT-AHSGPIFACDWHPEHAWLATASR-----DKTIKVWDLSIKPSLEYSINTIA----SVSRIKWRPQR 238 (330)
Q Consensus 170 ~~~-~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~----~v~~~~~~~~~ 238 (330)
+.+ +........ .|...+..++| |||++|++++. +..|++||+.+++.......+.. .+..++|+|||
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg 348 (741)
T 2ecf_A 270 PAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDG 348 (741)
T ss_dssp SSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTS
T ss_pred CCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCC
Confidence 876 432211111 46778999999 99999987764 56799999998855433333222 34688999999
Q ss_pred CeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEE-EEecCCCEEEEee-cCC--eEeeeec
Q psy6213 239 KFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGL-AWRGDPQLFIASS-RVS--IIPRAKN 301 (330)
Q Consensus 239 ~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~s~~-~dg--~i~iw~~ 301 (330)
+ ++++++ .++.+++|.+..... ...+..|...+..+ .|+|+++.|+..+ .++ .+++|..
T Consensus 349 ~-~~~~~~--~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~ 411 (741)
T 2ecf_A 349 S-ILWSSE--RTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAV 411 (741)
T ss_dssp C-EEEEEC--TTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEE
T ss_pred e-EEEEec--CCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEE
Confidence 9 466665 588777877653333 56677778888887 5999999776544 454 8889974
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.96 E-value=2.7e-28 Score=221.89 Aligned_cols=285 Identities=8% Similarity=-0.002 Sum_probs=199.4
Q ss_pred ccceEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCC---------C
Q psy6213 5 SPVHKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATN---------G 74 (330)
Q Consensus 5 ~~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---------g 74 (330)
..+.+++|+|||++++++ ||.|++||+.+++....+..+... ...+.+++|+| ++++|++++.+ +
T Consensus 17 ~~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~----~~~v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIE----SLRAIRYEISP-DREYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTT----TTTCSEEEECT-TSSEEEEEESCCCCSSSCCCS
T ss_pred ccccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEecccccc----ccccceEEECC-CCCEEEEEecCccceeeccee
Confidence 347889999999997668 999999999998776554432211 12368999999 99999998764 7
Q ss_pred cEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCe-----------
Q psy6213 75 AVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV----------- 143 (330)
Q Consensus 75 ~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v----------- 143 (330)
.+.+||+.+.. ...+.....|...+..++|+| +++.|+.++. +.|++||+.+++.......+...+
T Consensus 92 ~i~~~d~~~~~-~~~l~~~~~~~~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ 168 (723)
T 1xfd_A 92 YYVLSKIPHGD-PQSLDPPEVSNAKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYE 168 (723)
T ss_dssp EEEEEESSSCC-CEECCCTTCCSCCCSBCCBCS-STTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHH
T ss_pred eEEEEECCCCc-eEeccCCccccccccccEECC-CCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEE
Confidence 78899998732 122222234555689999999 8888988885 799999999887766555433333
Q ss_pred -------EEEEEcCCCCcEEEEEecCC----------------------------------cEEEEecCCCccceeeecc
Q psy6213 144 -------RDVEFNPHSPYAFASVSENG----------------------------------TIQQWDVRRPEKCFYQFTA 182 (330)
Q Consensus 144 -------~~~~~~~~~~~~~~~~~~dg----------------------------------~i~i~d~~~~~~~~~~~~~ 182 (330)
.+++|+|+|+. |++++.++ .|++||+.++ +....+..
T Consensus 169 ee~~~~~~~~~~SpDg~~-la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~-~~~~~l~~ 246 (723)
T 1xfd_A 169 EEILKTHIAHWWSPDGTR-LAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGP-THDLEMMP 246 (723)
T ss_dssp HTTSSSSEEEEECTTSSE-EEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSS-CCCEECCC
T ss_pred EEeccCcceEEECCCCCE-EEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCC-ceeEEeeC
Confidence 78999999995 66655432 7999999873 33344443
Q ss_pred C------CCCeEEEEEcCCCCEEEEEecC----CcEEEEeCCCCccccceec-cccce----EEEEEcCCCCeEEEE-ee
Q psy6213 183 H------SGPIFACDWHPEHAWLATASRD----KTIKVWDLSIKPSLEYSIN-TIASV----SRIKWRPQRKFHLAS-CS 246 (330)
Q Consensus 183 ~------~~~i~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~-~~~~v----~~~~~~~~~~~l~~~-~~ 246 (330)
+ ...+..++|+|||+++++.... ..|++||+.+++....... +...+ ..++|+|||+.++.. ..
T Consensus 247 ~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 326 (723)
T 1xfd_A 247 PDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAI 326 (723)
T ss_dssp CCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEE
T ss_pred CccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEec
Confidence 3 5678999999999988776533 5799999988754333222 22333 378999999986665 44
Q ss_pred cccCC------eEEEEE-ccCCCc-cceEeecCCCCeEE-EEEecCCCEEEEeecC---CeEeeeec
Q psy6213 247 LVVDS------SVNVWD-IRRPYI-PLASFTEHKDVVSG-LAWRGDPQLFIASSRV---SIIPRAKN 301 (330)
Q Consensus 247 ~~~~~------~i~i~d-~~~~~~-~~~~~~~~~~~v~~-~~~~~~~~~l~s~~~d---g~i~iw~~ 301 (330)
.++ .|.+|| ...+.. ....+..+...+.. ++|+|||+.|+..+.+ +.+++|..
T Consensus 327 --~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 391 (723)
T 1xfd_A 327 --PQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSA 391 (723)
T ss_dssp --CCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEE
T ss_pred --ccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEE
Confidence 466 577777 333330 02333333344554 6999999999876665 78899974
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.96 E-value=2.6e-26 Score=208.30 Aligned_cols=277 Identities=11% Similarity=0.073 Sum_probs=199.7
Q ss_pred ccceEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCC
Q psy6213 5 SPVHKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQ 83 (330)
Q Consensus 5 ~~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 83 (330)
..|.+++|+|| +.++.+ ++.+++||+.+++....... ...+.+++|+| +++.|+++ .++.|++|++.+
T Consensus 82 ~~v~~~~~spd-~~~~~~~~~~i~~~d~~~~~~~~l~~~--------~~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~ 150 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFTQGGLVGFDMLARKVTYLFDT--------NEETASLDFSP-VGDRVAYV-RNHNLYIARGGK 150 (706)
T ss_dssp CCCEEEEETTT-TEEEEEETTEEEEEETTTTEEEEEECC--------TTCCTTCEECT-TSSEEEEE-ETTEEEEEECBC
T ss_pred cCceeEEECCC-CeEEEEECCEEEEEECCCCceEEccCC--------cccccCCcCCC-CCCEEEEE-ECCeEEEEecCc
Confidence 56999999999 665555 99999999998765433221 12257899999 99999885 679999999875
Q ss_pred -----CCCCceeEEecccccc--------------eeEEEEEecCCCEEEEEe---------------------------
Q psy6213 84 -----ISRSKQERVFNDHKRT--------------VNKVSFHYVESNWLISGS--------------------------- 117 (330)
Q Consensus 84 -----~~~~~~~~~~~~~~~~--------------i~~i~~~~~~~~~l~~~~--------------------------- 117 (330)
.. .......+... +.++.|+| ++++|++++
T Consensus 151 ~~~~~g~---~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~Sp-Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~ 226 (706)
T 2z3z_A 151 LGEGMSR---AIAVTIDGTETLVYGQAVHQREFGIEKGTFWSP-KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYP 226 (706)
T ss_dssp TTSCCCC---CEESCSCCBTTEEESSCCGGGCTTCCCSEEECT-TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCC
T ss_pred ccccCCC---cEEeccCCCCCeEcccchhhhhcCCCceEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCC
Confidence 22 22222222222 58999999 899999887
Q ss_pred ------cCCcEEEEEeecCceeeeee--cCCCCeEEEEEcCCCCcEEEEEecCC-----cEEEEecCCCccceeeec-cC
Q psy6213 118 ------QDGTMRLFDIRCQESTKIFH--SNTESVRDVEFNPHSPYAFASVSENG-----TIQQWDVRRPEKCFYQFT-AH 183 (330)
Q Consensus 118 ------~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~dg-----~i~i~d~~~~~~~~~~~~-~~ 183 (330)
.+..|++||+.+++...... .+...+.+++|+|+++. +++++.++ .|++||+.++........ .+
T Consensus 227 ~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~ 305 (706)
T 2z3z_A 227 MAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENI-LYVAEVNRAQNECKVNAYDAETGRFVRTLFVETD 305 (706)
T ss_dssp BTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSE-EEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEC
T ss_pred CCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCE-EEEEEeCCCCCeeEEEEEECCCCceeeEEEEccC
Confidence 34679999999887654432 35567899999999995 66666565 899999987423322222 22
Q ss_pred CC---CeEEEEEcC--CCCEEEEEecCCcEEEEeCC-CCccccceeccccceEE-EEEcCCCCeEEEEeecccCC----e
Q psy6213 184 SG---PIFACDWHP--EHAWLATASRDKTIKVWDLS-IKPSLEYSINTIASVSR-IKWRPQRKFHLASCSLVVDS----S 252 (330)
Q Consensus 184 ~~---~i~~~~~~~--~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~~~~~~----~ 252 (330)
.. .+..+.|+| +|++++++..|+.+++|++. .+........+...+.. ++|+|+++.+++++. .++ .
T Consensus 306 ~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~--~~~~~~~~ 383 (706)
T 2z3z_A 306 KHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFEST--EASPLERH 383 (706)
T ss_dssp SSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEES--SSCTTCBE
T ss_pred CCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEec--CCCCceEE
Confidence 22 246789999 99999999999999999876 34334444445566766 799999998777776 454 6
Q ss_pred EEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecC----CeEeeeecc
Q psy6213 253 VNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRV----SIIPRAKNI 302 (330)
Q Consensus 253 i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----g~i~iw~~~ 302 (330)
|..||+.++. ...+. |...+.+++|+|||++|+....+ +.|++|+..
T Consensus 384 l~~~d~~~~~--~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~ 434 (706)
T 2z3z_A 384 FYCIDIKGGK--TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIG 434 (706)
T ss_dssp EEEEETTCCC--CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESS
T ss_pred EEEEEcCCCC--ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECC
Confidence 7777777654 33333 66779999999999988877544 569999754
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.96 E-value=1e-26 Score=212.10 Aligned_cols=277 Identities=8% Similarity=-0.000 Sum_probs=200.8
Q ss_pred cceEEEEeeCCCeeecC-CCeEEEEEcCCc---ceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEEC
Q psy6213 6 PVHKHGLKADNGLAQPS-RNVFKIFLIKDT---EFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNL 81 (330)
Q Consensus 6 ~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~ 81 (330)
.|.+++|||||++++.+ ++.|.+||+.++ +... +..+ ...+..++|+| ++++|+.++ ++.|.+||+
T Consensus 110 ~v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~-l~~~-------~~~~~~~~~SP-DG~~la~~~-~~~i~~~d~ 179 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQ-LTHG-------EGFATDAKLSP-KGGFVSFIR-GRNLWVIDL 179 (741)
T ss_dssp ESCCCEECTTSSEEEEEETTEEEEEESSSCSTTSCCB-CCCS-------SSCEEEEEECT-TSSEEEEEE-TTEEEEEET
T ss_pred CcceeEECCCCCEEEEEeCCcEEEEECCCCCcceEEE-cccC-------CcccccccCCC-CCCEEEEEe-CCcEEEEec
Confidence 48999999999997777 999999999987 4322 2211 23368999999 999999887 468999999
Q ss_pred CCCCCCceeEEecccccc----------------eeEEEEEecCCCEEEEEecCC-------------------------
Q psy6213 82 GQISRSKQERVFNDHKRT----------------VNKVSFHYVESNWLISGSQDG------------------------- 120 (330)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~----------------i~~i~~~~~~~~~l~~~~~d~------------------------- 120 (330)
.+ .+.......+... +..+.|+| ++++|++++.|+
T Consensus 180 ~~---g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~ 255 (741)
T 2ecf_A 180 AS---GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPA 255 (741)
T ss_dssp TT---TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCB
T ss_pred CC---CCEEEeccCCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCC
Confidence 87 4444333333322 47899999 888888887765
Q ss_pred --------cEEEEEeec-Cceeeeee--cCCCCeEEEEEcCCCCcEEEEEe----cCCcEEEEecCCCccceeeeccCCC
Q psy6213 121 --------TMRLFDIRC-QESTKIFH--SNTESVRDVEFNPHSPYAFASVS----ENGTIQQWDVRRPEKCFYQFTAHSG 185 (330)
Q Consensus 121 --------~i~i~d~~~-~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~----~dg~i~i~d~~~~~~~~~~~~~~~~ 185 (330)
.|++||+.+ ++...... .+...+..++| |+++++++++. .+..|++||+.+ ++....+..+..
T Consensus 256 ~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~ 333 (741)
T 2ecf_A 256 AGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLAS-NQQRVLAHETSP 333 (741)
T ss_dssp TTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTT-CCEEEEEEEECS
T ss_pred CCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCC-CceEEEEEcCCC
Confidence 789999988 77554432 35677899999 99996444433 256799999987 444444444433
Q ss_pred ----CeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEE-EEcCCCCeEEEEeecccCC--eEEEEEc
Q psy6213 186 ----PIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRI-KWRPQRKFHLASCSLVVDS--SVNVWDI 258 (330)
Q Consensus 186 ----~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~-~~~~~~~~l~~~~~~~~~~--~i~i~d~ 258 (330)
.+..++|+|+|+++++++.||.+++|.+...........+...+..+ .|+|+++.++++++ .++ .+++|++
T Consensus 334 ~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~~~~l~~~~~~v~~~~~~s~dg~~l~~~~~--~~~~~~~~l~~~ 411 (741)
T 2ecf_A 334 TWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGKAAALTHGNWSVDELLAVDEKAGLAYFRAG--IESARESQIYAV 411 (741)
T ss_dssp SCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSCEEESCCSSSCEEEEEEEETTTTEEEEEEC--SSCTTCBEEEEE
T ss_pred CcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCCeeeeeecceEEEeEeEEeCCCCEEEEEEe--CCCCceEEEEEE
Confidence 45689999999999999999988888765221244444456677777 59999998777776 455 8999998
Q ss_pred cCCCccceEeecCCCCeEEEEEecCCCEEEEeecC----CeEeeeec
Q psy6213 259 RRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRV----SIIPRAKN 301 (330)
Q Consensus 259 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d----g~i~iw~~ 301 (330)
.........+.. ...+..++|+|||+.|+....+ +.+.+|+.
T Consensus 412 ~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~ 457 (741)
T 2ecf_A 412 PLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRA 457 (741)
T ss_dssp ETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEET
T ss_pred EcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEc
Confidence 753332455554 5678999999999998877554 46777764
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.96 E-value=7.2e-26 Score=187.46 Aligned_cols=272 Identities=13% Similarity=0.125 Sum_probs=183.2
Q ss_pred CCcccceEEEEeeCCCe-eecC--CCeEEEEEcC--CcceeeeeceeeccccccccceeeeeecccCCcEEEEEc-CCCc
Q psy6213 2 AYLSPVHKHGLKADNGL-AQPS--RNVFKIFLIK--DTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGA-TNGA 75 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~-~~~g--d~~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~ 75 (330)
.|...+.+++|+|+|++ ++++ ++.|.+|+++ +++........... .+..++|+| +++++++++ .++.
T Consensus 35 ~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~s~-dg~~l~~~~~~~~~ 107 (343)
T 1ri6_A 35 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG------SLTHISTDH-QGQFVFVGSYNAGN 107 (343)
T ss_dssp ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS------CCSEEEECT-TSSEEEEEETTTTE
T ss_pred ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC------CCcEEEEcC-CCCEEEEEecCCCe
Confidence 35678899999999998 4444 4999999998 55543322222111 358899999 888776655 4888
Q ss_pred EEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEe-cCCcEEEEEeec-Cceee----eeec-CCCCeEEEEE
Q psy6213 76 VVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGS-QDGTMRLFDIRC-QESTK----IFHS-NTESVRDVEF 148 (330)
Q Consensus 76 i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~-~d~~i~i~d~~~-~~~~~----~~~~-~~~~v~~~~~ 148 (330)
|.+||+...........+.. ...+.+++|+| +++++++++ .++.|++||+.+ ++... .+.. ....+..++|
T Consensus 108 i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (343)
T 1ri6_A 108 VSVTRLEDGLPVGVVDVVEG-LDGCHSANISP-DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVF 185 (343)
T ss_dssp EEEEEEETTEEEEEEEEECC-CTTBCCCEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEE
T ss_pred EEEEECCCCccccccccccC-CCCceEEEECC-CCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEE
Confidence 99999952111334444443 34688999998 777777776 899999999987 54432 2222 3457889999
Q ss_pred cCCCCcEEEEEecCCcEEEEecCCC-ccc--eeeec---cC---CCCeEEEEEcCCCCEEEEEe-cCCcEEEEeCCC--C
Q psy6213 149 NPHSPYAFASVSENGTIQQWDVRRP-EKC--FYQFT---AH---SGPIFACDWHPEHAWLATAS-RDKTIKVWDLSI--K 216 (330)
Q Consensus 149 ~~~~~~~~~~~~~dg~i~i~d~~~~-~~~--~~~~~---~~---~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~--~ 216 (330)
+|+++++++++..++.|.+||+... +.. ..... .. ...+..++|+|++++|+++. .++.|.+||+.. +
T Consensus 186 ~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~ 265 (343)
T 1ri6_A 186 HPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGS 265 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCC
Confidence 9999976666668999999999642 211 11111 11 23566899999998877544 789999999983 2
Q ss_pred c-cccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEcc--CCCc-cceEeecCCCCeEEEEEecCCC
Q psy6213 217 P-SLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIR--RPYI-PLASFTEHKDVVSGLAWRGDPQ 285 (330)
Q Consensus 217 ~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~--~~~~-~~~~~~~~~~~v~~~~~~~~~~ 285 (330)
. ...........+..++|+|+++++++++. .++.+.+|++. ++.. .+..+.. .....+++|.|+.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~--~~~~v~v~~~d~~~g~~~~~~~~~~-g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 266 VLSKEGFQPTETQPRGFNVDHSGKYLIAAGQ--KSHHISVYEIVGEQGLLHEKGRYAV-GQGPMWVVVNAHEG 335 (343)
T ss_dssp CEEEEEEEECSSSCCCEEECTTSSEEEEECT--TTCEEEEEEEETTTTEEEEEEEEEC-SSSCCEEEEEEEC-
T ss_pred ceEEeeeecCCCccceEEECCCCCEEEEecC--CCCeEEEEEEcCCCceeeEcccccc-CCCCeeEEEEcccC
Confidence 1 12222223344889999999998788775 58999999665 4432 1333332 24567778877543
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.95 E-value=2.5e-26 Score=186.05 Aligned_cols=234 Identities=10% Similarity=0.103 Sum_probs=174.9
Q ss_pred CCcccceEEEEeeCCCeeecC-CCeEEEEEcCC-cceeeeeceeeccccccccceeeeeecccCCcEEEEEc--CCCcEE
Q psy6213 2 AYLSPVHKHGLKADNGLAQPS-RNVFKIFLIKD-TEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGA--TNGAVV 77 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~~~~g-d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~--~dg~i~ 77 (330)
.|.+.|.+++|+|+|++++++ ++.|.+||+++ ++.......+. ...+.+++|+| ++++|++++ .++...
T Consensus 39 ~~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~------~~~~~~~~~sp-dg~~l~~~~~~~~~~~~ 111 (297)
T 2ojh_A 39 QTPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFA------TICNNDHGISP-DGALYAISDKVEFGKSA 111 (297)
T ss_dssp EESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTC------CCBCSCCEECT-TSSEEEEEECTTTSSCE
T ss_pred cCCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccc------cccccceEECC-CCCEEEEEEeCCCCcce
Confidence 477889999999999997777 99999999998 77654433221 12358899999 999999988 334555
Q ss_pred EEECCCCCCCceeEEecccccceeEEEEEecCCCEEE-EEecCCcEEEEEeec-CceeeeeecCCCCeEEEEEcCCCCcE
Q psy6213 78 VWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLI-SGSQDGTMRLFDIRC-QESTKIFHSNTESVRDVEFNPHSPYA 155 (330)
Q Consensus 78 iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~-~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~ 155 (330)
+|.++.. ......+..+ ..+..++|+| +++.|+ +++.++.+++|+++. ......+..+...+.+++|+|+++.+
T Consensus 112 l~~~~~~--~~~~~~~~~~-~~~~~~~~sp-dg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 187 (297)
T 2ojh_A 112 IYLLPST--GGTPRLMTKN-LPSYWHGWSP-DGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWI 187 (297)
T ss_dssp EEEEETT--CCCCEECCSS-SSEEEEEECT-TSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEE
T ss_pred EEEEECC--CCceEEeecC-CCccceEECC-CCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEE
Confidence 6555321 1223334433 3488899999 777666 788899999999753 23345555677889999999999965
Q ss_pred EEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecC-----------CcEEEEeCCCCccccc--e
Q psy6213 156 FASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRD-----------KTIKVWDLSIKPSLEY--S 222 (330)
Q Consensus 156 ~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----------g~i~i~d~~~~~~~~~--~ 222 (330)
++++..++.+++|++.........+..+...+..++|+|++++|++++.+ +.|.+||+.+++.... .
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~ 267 (297)
T 2ojh_A 188 YFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDL 267 (297)
T ss_dssp EEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEE
T ss_pred EEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeecc
Confidence 55555689999999874455667777788889999999999999888876 5699999988754222 2
Q ss_pred eccccceEEEEEcCCCCeEEEEee
Q psy6213 223 INTIASVSRIKWRPQRKFHLASCS 246 (330)
Q Consensus 223 ~~~~~~v~~~~~~~~~~~l~~~~~ 246 (330)
..+...+..++|+|+++++++++.
T Consensus 268 ~~~~~~~~~~~~spdg~~l~~~~~ 291 (297)
T 2ojh_A 268 FGGQGTMNSPNWSPDGDEFAYVRY 291 (297)
T ss_dssp EESTTTSCSCCBCTTSSEEEEEEE
T ss_pred CCCCcccccceECCCCCEEEEEEe
Confidence 256678999999999998777765
No 141
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.95 E-value=2.7e-25 Score=189.32 Aligned_cols=293 Identities=13% Similarity=0.161 Sum_probs=193.0
Q ss_pred cccceEEEEeeCCCeeecC-CCeEEEEEcCCccee--------eeeceeeccccccccceeeeeecccCCcEEE----EE
Q psy6213 4 LSPVHKHGLKADNGLAQPS-RNVFKIFLIKDTEFV--------ETHNLRVGKNINLNFSCNDVAWSCIEENHIA----TG 70 (330)
Q Consensus 4 ~~~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~----~~ 70 (330)
...++.+++++++.+++++ ...+++|+....... ............+...|.+++|+| ++++|+ +|
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~lav~~~sg 114 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSC-DNLTLSACMMSS 114 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECT-TSCEEEEEEEET
T ss_pred CCCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcC-CCCEEEEEEecc
Confidence 3468999999999995555 334999886532110 000011111122345589999999 899999 78
Q ss_pred cCCCcEEEEECCCC--------CCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCC
Q psy6213 71 ATNGAVVVWNLGQI--------SRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTES 142 (330)
Q Consensus 71 ~~dg~i~iw~~~~~--------~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 142 (330)
+.|+.|++||+.+. ........+.+|...|.+++|+|.++++|++++.||+|++||++++........|...
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~ 194 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVA 194 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGC
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCc
Confidence 89999999998652 0111245566799999999999955899999999999999999988776666678889
Q ss_pred eEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeecc-------CCCCeEEEEEcCCCCEEEEEe-cCCc------E
Q psy6213 143 VRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA-------HSGPIFACDWHPEHAWLATAS-RDKT------I 208 (330)
Q Consensus 143 v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~-~dg~------i 208 (330)
|.+++|+|+++ .|++|+.||.|++||++. .....+.. |...+.+++|++++.++++.+ .||. +
T Consensus 195 v~~v~wspdg~-~lasgs~dg~v~iwd~~~--~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v 271 (434)
T 2oit_A 195 VTSVCWSPKGK-QLAVGKQNGTVVQYLPTL--QEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDV 271 (434)
T ss_dssp EEEEEECTTSS-CEEEEETTSCEEEECTTC--CEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEE
T ss_pred eeEEEEcCCCC-EEEEEcCCCcEEEEccCC--cccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCce
Confidence 99999999998 489999999999999982 22333322 234799999999888775543 4433 8
Q ss_pred EEEeCCCCccc--ccee----------ccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCC--------------
Q psy6213 209 KVWDLSIKPSL--EYSI----------NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY-------------- 262 (330)
Q Consensus 209 ~i~d~~~~~~~--~~~~----------~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~-------------- 262 (330)
++|+++..+.. .... ....+...+.+-++.+.++++.+ ..+.|.+.......
T Consensus 272 ~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~--~s~dv~vl~~~~~~~~~~~~~~~d~~ra 349 (434)
T 2oit_A 272 VMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASA--ASTEVSILARQSDQINWESWLLEDSSRA 349 (434)
T ss_dssp EEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEET--TCSBCEEEEECTTSSCEEEEEECGGGCC
T ss_pred EEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecC--CCCceeEEEecCCCCccEEEeccccccc
Confidence 99999865211 1000 11122223344467776666665 45555555543211
Q ss_pred -ccceEeecCCCCeEEEEEec---------------CCCEEEEeecCCeEeeeeccc
Q psy6213 263 -IPLASFTEHKDVVSGLAWRG---------------DPQLFIASSRVSIIPRAKNIK 303 (330)
Q Consensus 263 -~~~~~~~~~~~~v~~~~~~~---------------~~~~l~s~~~dg~i~iw~~~~ 303 (330)
.|+.. ........++++.- --..|..-+.||.|..|....
T Consensus 350 ~lP~~~-~~~dt~piG~~~d~~~~~~v~~~~~~~~~p~P~l~~l~~~G~L~~~~~~~ 405 (434)
T 2oit_A 350 ELPVTD-KSDDSLPMGVVVDYTNQVEITISDEKTLPPAPVLMLLSTDGVLCPFYMIN 405 (434)
T ss_dssp BCCBCT-TSCBCCEEEEEEECCCCCCEEEETTEEECCCCEEEEEETTSEEEEEEEEE
T ss_pred cccCCC-CCCCceeeEEEEEccCCceeecCccccCCCCCEEEEECCCCEEEEEEEEe
Confidence 11110 01122234444322 235788889999999997654
No 142
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.95 E-value=5.5e-26 Score=201.61 Aligned_cols=270 Identities=8% Similarity=0.015 Sum_probs=189.5
Q ss_pred cccceEEEEeeCCCeeec-C--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcC---CCcEE
Q psy6213 4 LSPVHKHGLKADNGLAQP-S--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGAT---NGAVV 77 (330)
Q Consensus 4 ~~~v~~~~~s~~~~~~~~-g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~i~ 77 (330)
..+|++++|+|||+.++. + ||+++||++++++.......+. ..+..++|+| + +++++++. +....
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~-------~~~~~~~~sp-d-~~l~~~~~~~g~~~~~ 91 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPI-------NSVLDPHYGV-G-RVILVRDVSKGAEQHA 91 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCC-------SEECEECTTC-S-EEEEEEECSTTSCCEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccc-------cccccccCCC-C-eEEEEeccCCCCcceE
Confidence 457999999999999444 3 9999999997766543322111 2358899999 6 77777664 45566
Q ss_pred EEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEE
Q psy6213 78 VWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFA 157 (330)
Q Consensus 78 iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 157 (330)
+|.+.....+... .+... ......+|+|+....+++.+.++.+.+||+.+++.......+. .+++|+|+|+. ++
T Consensus 92 l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~-la 165 (582)
T 3o4h_A 92 LFKVNTSRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDL-IA 165 (582)
T ss_dssp EEEEETTSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTE-EE
T ss_pred EEEEeccCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCE-EE
Confidence 6655431012222 22222 2344668888444445555555666799999887665554332 78999999994 66
Q ss_pred EEecC----CcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCC--cEEEEeCCCCccccceeccccceEE
Q psy6213 158 SVSEN----GTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDK--TIKVWDLSIKPSLEYSINTIASVSR 231 (330)
Q Consensus 158 ~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~v~~ 231 (330)
+++.+ +.|++||+.++ + ...+..|.+.+..++|+|||+.|+++..++ .|++||+.+++.. ....+...+..
T Consensus 166 ~~~~~~~~~~~i~~~d~~~g-~-~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~ 242 (582)
T 3o4h_A 166 GLGFFGGGRVSLFTSNLSSG-G-LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSS 242 (582)
T ss_dssp EEEEEETTEEEEEEEETTTC-C-CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHH
T ss_pred EEEEcCCCCeEEEEEcCCCC-C-ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhh
Confidence 66655 67999999863 3 346677888899999999999999888888 8999999887555 44444555555
Q ss_pred EE--------EcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCe---Eeeee
Q psy6213 232 IK--------WRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSI---IPRAK 300 (330)
Q Consensus 232 ~~--------~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~---i~iw~ 300 (330)
++ |+|||. ++++++ .++.+++|++ ++. .. .+.+.+.+++|+ +++++++++.+.. +++|+
T Consensus 243 ~~~~~~~~~~~spdg~-~~~~~~--~~g~~~l~~~--g~~-~~---~~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 243 YRPTAITWLGYLPDGR-LAVVAR--REGRSAVFID--GER-VE---APQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp HCCSEEEEEEECTTSC-EEEEEE--ETTEEEEEET--TEE-EC---CCSSEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred hhhccccceeEcCCCc-EEEEEE--cCCcEEEEEE--CCe-ec---cCCCceEEEEec-CCEEEEEEcCCCCCCeEEEEc
Confidence 55 999994 677666 6999999999 432 22 344678999999 9999999888754 66665
Q ss_pred c
Q psy6213 301 N 301 (330)
Q Consensus 301 ~ 301 (330)
.
T Consensus 313 ~ 313 (582)
T 3o4h_A 313 S 313 (582)
T ss_dssp T
T ss_pred C
Confidence 4
No 143
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.95 E-value=1.2e-24 Score=179.34 Aligned_cols=241 Identities=10% Similarity=0.053 Sum_probs=171.8
Q ss_pred cccceEEEEeeCCCe-eecC--CCeEEEEEcCCcce-eeeeceeeccccccccceeeeeecccCCcEEEEEcCCC---cE
Q psy6213 4 LSPVHKHGLKADNGL-AQPS--RNVFKIFLIKDTEF-VETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNG---AV 76 (330)
Q Consensus 4 ~~~v~~~~~s~~~~~-~~~g--d~~i~iw~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg---~i 76 (330)
...+ +++|+|+|++ ++++ ++.|.+||.++++. ......... +..+++|+| ++++++++..++ .|
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-------~~~~~~~s~-dg~~l~~~~~~~~~~~i 110 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQS-------SMADVDITP-DDQFAVTVTGLNHPFNM 110 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSS-------CCCCEEECT-TSSEEEECCCSSSSCEE
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCC-------CccceEECC-CCCEEEEecCCCCcccE
Confidence 3445 8999999996 4444 88999999998876 433332211 123499999 999888655553 89
Q ss_pred EEEECCCCCCCceeEEecccccceeEEEEEecCCC-EEEEEecCCc-EEEEEeecCcee----eeeecCCCCeEEEEEcC
Q psy6213 77 VVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESN-WLISGSQDGT-MRLFDIRCQEST----KIFHSNTESVRDVEFNP 150 (330)
Q Consensus 77 ~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~-~l~~~~~d~~-i~i~d~~~~~~~----~~~~~~~~~v~~~~~~~ 150 (330)
.+||+.+ .+....+.. .....+++|+| +++ ++++...++. |.+|++.....+ ............++|+|
T Consensus 111 ~v~d~~~---~~~~~~~~~-~~~~~~~~~sp-dg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~sp 185 (331)
T 3u4y_A 111 QSYSFLK---NKFISTIPI-PYDAVGIAISP-NGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTP 185 (331)
T ss_dssp EEEETTT---TEEEEEEEC-CTTEEEEEECT-TSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECT
T ss_pred EEEECCC---CCeEEEEEC-CCCccceEECC-CCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECC
Confidence 9999987 555555554 34568999999 665 5555566688 999998754332 11123445689999999
Q ss_pred CCCcEEEEEecCCcEEEEecCCCccc---eeeeccCCCCeEEEEEcCCCCEEEEEe-cCCcEEEEeCCCCcc--cccee-
Q psy6213 151 HSPYAFASVSENGTIQQWDVRRPEKC---FYQFTAHSGPIFACDWHPEHAWLATAS-RDKTIKVWDLSIKPS--LEYSI- 223 (330)
Q Consensus 151 ~~~~~~~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~--~~~~~- 223 (330)
+++++++++..++.|++||+.+ .+. +..+. ....+..++|+|+|++++++. .++.|.+||+.+++. .....
T Consensus 186 dg~~l~v~~~~~~~v~v~d~~~-~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~ 263 (331)
T 3u4y_A 186 DGNFAFVANLIGNSIGILETQN-PENITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGH 263 (331)
T ss_dssp TSSEEEEEETTTTEEEEEECSS-TTSCEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEEC
T ss_pred CCCEEEEEeCCCCeEEEEECCC-Ccccceeeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeeccccc
Confidence 9997677777789999999987 444 45555 346678999999999776655 577899999988744 11111
Q ss_pred ------ccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCC
Q psy6213 224 ------NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY 262 (330)
Q Consensus 224 ------~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~ 262 (330)
........++|+|+++++++++. .++.|.+||+....
T Consensus 264 ~~~~~~~~~~~~~~~~~spdg~~l~v~~~--~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 264 GLLIDPRPLFGANQMALNKTETKLFISAN--ISRELKVFTISGKV 306 (331)
T ss_dssp CCCCCCGGGTTCCCEEECTTSSEEEEEET--TTTEEEEEETTSCE
T ss_pred ccccCCCCcccccceEECCCCCEEEEecC--CCCcEEEEEecCCc
Confidence 11122356899999999877776 68899999998654
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.95 E-value=2.6e-25 Score=202.27 Aligned_cols=272 Identities=7% Similarity=-0.003 Sum_probs=186.7
Q ss_pred cceEEEEeeCCCeeecC--C---------CeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCC
Q psy6213 6 PVHKHGLKADNGLAQPS--R---------NVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNG 74 (330)
Q Consensus 6 ~v~~~~~s~~~~~~~~g--d---------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 74 (330)
.|.+++|||||++++.+ + +.+.+||+++++... +.... .....+..++|+| +++.|+.++. +
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~-l~~~~----~~~~~~~~~~~SP-dG~~la~~~~-~ 134 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQS-LDPPE----VSNAKLQYAGWGP-KGQQLIFIFE-N 134 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEE-CCCTT----CCSCCCSBCCBCS-STTCEEEEET-T
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEe-ccCCc----cccccccccEECC-CCCEEEEEEC-C
Confidence 48999999999995544 3 789999999887522 21111 1112257899999 9999999886 7
Q ss_pred cEEEEECCCCCCCceeEEecccccc------------------eeEEEEEecCCCEEEEEecCC----------------
Q psy6213 75 AVVVWNLGQISRSKQERVFNDHKRT------------------VNKVSFHYVESNWLISGSQDG---------------- 120 (330)
Q Consensus 75 ~i~iw~~~~~~~~~~~~~~~~~~~~------------------i~~i~~~~~~~~~l~~~~~d~---------------- 120 (330)
.|++|++.+ ++.......+... +.+++|+| +++.|++++.++
T Consensus 135 ~i~~~~~~~---g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~ 210 (723)
T 1xfd_A 135 NIYYCAHVG---KQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIY 210 (723)
T ss_dssp EEEEESSSS---SCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSS
T ss_pred eEEEEECCC---CceEEEecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCC
Confidence 899999987 4444444443333 37899999 889998887653
Q ss_pred ------------------cEEEEEeecCceeeeeecC------CCCeEEEEEcCCCCcEEEEEec----CCcEEEEecCC
Q psy6213 121 ------------------TMRLFDIRCQESTKIFHSN------TESVRDVEFNPHSPYAFASVSE----NGTIQQWDVRR 172 (330)
Q Consensus 121 ------------------~i~i~d~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~~~----dg~i~i~d~~~ 172 (330)
.|++||+.+++....+..+ ...+..++|+|+|+ ++++... +..|++||+.+
T Consensus 211 ~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~~d~~~ 289 (723)
T 1xfd_A 211 PTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTK-VAVTWLNRAQNVSILTLCDATT 289 (723)
T ss_dssp CCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSE-EEEEEEETTSCEEEEEEEETTT
T ss_pred CcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCe-EEEEEEcCCCCeEEEEEEeCCC
Confidence 7999999988765555543 56789999999998 4555433 35799999987
Q ss_pred Cccceeeecc-CCCCe----EEEEEcCCCCEEEE--EecCC------cEEEEe-CCCCcc--ccceeccccceEE-EEEc
Q psy6213 173 PEKCFYQFTA-HSGPI----FACDWHPEHAWLAT--ASRDK------TIKVWD-LSIKPS--LEYSINTIASVSR-IKWR 235 (330)
Q Consensus 173 ~~~~~~~~~~-~~~~i----~~~~~~~~~~~l~~--~~~dg------~i~i~d-~~~~~~--~~~~~~~~~~v~~-~~~~ 235 (330)
++....+.. +...+ ..++|+|||+.|+. +..++ .|.+|| ...+.. ..........+.. ++|+
T Consensus 290 -g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~s 368 (723)
T 1xfd_A 290 -GVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYD 368 (723)
T ss_dssp -CCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEE
T ss_pred -CcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEc
Confidence 444443332 33443 37899999997765 44666 577777 344430 3333333344444 6999
Q ss_pred CCCCeEEEEeecccC--CeEEEEEccCCCc-cceEeec---CCCCeEEEEEecCCCEEEEeec
Q psy6213 236 PQRKFHLASCSLVVD--SSVNVWDIRRPYI-PLASFTE---HKDVVSGLAWRGDPQLFIASSR 292 (330)
Q Consensus 236 ~~~~~l~~~~~~~~~--~~i~i~d~~~~~~-~~~~~~~---~~~~v~~~~~~~~~~~l~s~~~ 292 (330)
|+|+.+++++. .+ +.+++|++..... ....+.. |...+..++|+|||++|+....
T Consensus 369 pdg~~l~~~~~--~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 369 EKGNKIYFLST--EDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp TTTTEEEEEES--SSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred CCCCEEEEEEc--CCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence 99998777766 34 8899999864321 1333333 5677899999999998887543
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.95 E-value=2.5e-24 Score=178.74 Aligned_cols=266 Identities=8% Similarity=0.063 Sum_probs=183.3
Q ss_pred CCeEEEEEcCC--cceeeeeceeeccccccccceeeeeecccCCcEEEEEcC---CCcEEEEECCCCCCCceeEEecccc
Q psy6213 23 RNVFKIFLIKD--TEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGAT---NGAVVVWNLGQISRSKQERVFNDHK 97 (330)
Q Consensus 23 d~~i~iw~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---dg~i~iw~~~~~~~~~~~~~~~~~~ 97 (330)
++.|.+|+++. ++.......... ..+..++|+| +++ |++++. ++.|.+|++.. ...+.+..+..+.
T Consensus 15 ~~~i~v~~~d~~tg~~~~~~~~~~~------~~p~~~a~sp-dg~-l~~~~~~~~~~~v~~~~~~~-g~~~~~~~~~~~~ 85 (347)
T 3hfq_A 15 SQGIYQGTLDTTAKTLTNDGLLAAT------QNPTYLALSA-KDC-LYSVDKEDDEGGIAAWQIDG-QTAHKLNTVVAPG 85 (347)
T ss_dssp CCEEEEEEEETTTTEEEEEEEEEEC------SCCCCEEECT-TCE-EEEEEEETTEEEEEEEEEET-TEEEEEEEEEEES
T ss_pred CCCEEEEEEcCCCCeEEEeeeeecc------CCcceEEEcc-CCe-EEEEEecCCCceEEEEEecC-CcEEEeeeeecCC
Confidence 66788887764 443332111111 1247899999 888 555543 68999999965 2223444445577
Q ss_pred cceeEEEEEecCCCEEEEEe-cCCcEEEEEeec-Cc--eeeeeecC---------CCCeEEEEEcCCCCcEEEEEecCCc
Q psy6213 98 RTVNKVSFHYVESNWLISGS-QDGTMRLFDIRC-QE--STKIFHSN---------TESVRDVEFNPHSPYAFASVSENGT 164 (330)
Q Consensus 98 ~~i~~i~~~~~~~~~l~~~~-~d~~i~i~d~~~-~~--~~~~~~~~---------~~~v~~~~~~~~~~~~~~~~~~dg~ 164 (330)
..+..++|+| ++++|++++ .++.|.+|++.. +. .+..+... ...+.+++|+|+++ ++++...++.
T Consensus 86 ~~p~~~a~sp-dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~ 163 (347)
T 3hfq_A 86 TPPAYVAVDE-ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDK 163 (347)
T ss_dssp CCCSEEEEET-TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTE
T ss_pred CCCEEEEECC-CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCE
Confidence 7889999998 888888777 679999999963 22 23333211 12488999999999 7888888899
Q ss_pred EEEEecCCCccce--eeecc-CCCCeEEEEEcCCCCEEEE-EecCCcEEEEeCCC--Ccc--ccceecc------ccceE
Q psy6213 165 IQQWDVRRPEKCF--YQFTA-HSGPIFACDWHPEHAWLAT-ASRDKTIKVWDLSI--KPS--LEYSINT------IASVS 230 (330)
Q Consensus 165 i~i~d~~~~~~~~--~~~~~-~~~~i~~~~~~~~~~~l~~-~~~dg~i~i~d~~~--~~~--~~~~~~~------~~~v~ 230 (330)
|++||+...+... ..+.. ....+..++|+|+|+++++ ...++.+.+|++.. ++. ....... ...+.
T Consensus 164 v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 243 (347)
T 3hfq_A 164 VYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAA 243 (347)
T ss_dssp EEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEE
T ss_pred EEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcce
Confidence 9999998423322 11222 2336788999999996655 55788999999875 321 1111111 14588
Q ss_pred EEEEcCCCCeEEEEeecccCCeEEEEEccCCC--ccceEeecCCCCeEEEEEecCCCEEEEeecC-CeEeeeec
Q psy6213 231 RIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY--IPLASFTEHKDVVSGLAWRGDPQLFIASSRV-SIIPRAKN 301 (330)
Q Consensus 231 ~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-g~i~iw~~ 301 (330)
.++|+|+|++++++.. .++.|.+|++.... ..+..+..+...+.+++|+|||++|++++.+ +.+.+|+.
T Consensus 244 ~i~~spdG~~l~v~~~--~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 244 AIRLSHDGHFLYVSNR--GYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYAR 315 (347)
T ss_dssp EEEECTTSCEEEEEEE--TTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred eEEECCCCCEEEEEeC--CCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEE
Confidence 9999999998777776 68999999997321 2244555666678999999999988888765 89999954
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.95 E-value=2.2e-25 Score=209.93 Aligned_cols=276 Identities=13% Similarity=0.098 Sum_probs=211.4
Q ss_pred CCcccceEEEEeeCCCe-eecC-CCeEEEEEcCC-cceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEE
Q psy6213 2 AYLSPVHKHGLKADNGL-AQPS-RNVFKIFLIKD-TEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVV 78 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~-~~~g-d~~i~iw~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 78 (330)
.|.+.+.++.|+++ .+ ++++ ++.++||.++. +.....+..+. .+...+|+| +++.|+.+ .++.|.+
T Consensus 201 ~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~--------~~~~~~~Sp-DG~~la~~-~~~~i~~ 269 (1045)
T 1k32_A 201 DMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT--------DYYPRHLNT-DGRRILFS-KGGSIYI 269 (1045)
T ss_dssp CCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC--------SSCEEEEEE-SSSCEEEE-ETTEEEE
T ss_pred CCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC--------CcceeeEcC-CCCEEEEE-eCCEEEE
Confidence 47889999999998 55 5555 89999998764 22222222221 135679999 99988887 4889999
Q ss_pred EECCCCCCCceeEEecc-----------cccceeEEEEE-ecCCCEEEEEecCCcEEEEEeecCceeeeeecCCC-CeEE
Q psy6213 79 WNLGQISRSKQERVFND-----------HKRTVNKVSFH-YVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTE-SVRD 145 (330)
Q Consensus 79 w~~~~~~~~~~~~~~~~-----------~~~~i~~i~~~-~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~v~~ 145 (330)
|++.. ..+..+.. |...+.+++|+ | +++.+++++ ++.|.+|++.+++... +..+.. .+..
T Consensus 270 ~d~~~----~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~p-dG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~~~~~ 342 (1045)
T 1k32_A 270 FNPDT----EKIEKIEIGDLESPEDRIISIPSKFAEDFSPL-DGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRIRYVR 342 (1045)
T ss_dssp ECTTT----CCEEECCCCCCCBCCSEEEECGGGGEEEEEEC-GGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCEEEEE
T ss_pred ecCCc----eEeeeeccCcccccccccccccccceeeecCC-CCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcceEEe
Confidence 99843 22334433 44579999999 9 888888877 7899999998776543 555666 8999
Q ss_pred EEEcCCCCcEEEEEecCCcEE-EEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceec
Q psy6213 146 VEFNPHSPYAFASVSENGTIQ-QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSIN 224 (330)
Q Consensus 146 ~~~~~~~~~~~~~~~~dg~i~-i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 224 (330)
++|+ +++. ++.++.++.+. +||+.. .. ...+..|...+..++|+|+|++|++++.++.|++||+.+++.......
T Consensus 343 ~~~s-dg~~-l~~~s~~~~l~~~~d~~~-~~-~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~ 418 (1045)
T 1k32_A 343 RGGD-TKVA-FIHGTREGDFLGIYDYRT-GK-AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS 418 (1045)
T ss_dssp ECSS-SEEE-EEEEETTEEEEEEEETTT-CC-EEECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred eeEc-CCCe-EEEEECCCceEEEEECCC-CC-ceEecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccC
Confidence 9999 8884 77777788888 889876 33 233447778899999999999999999999999999998865544446
Q ss_pred cccceEEEEEcCCCCeEEEEeecc-------cCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEe
Q psy6213 225 TIASVSRIKWRPQRKFHLASCSLV-------VDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIP 297 (330)
Q Consensus 225 ~~~~v~~~~~~~~~~~l~~~~~~~-------~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 297 (330)
+...+..++|+|||+++++++... .++.|++||+.+++ ...+..|...+..++|+|||+.|++++.++...
T Consensus 419 ~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~--~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~ 496 (1045)
T 1k32_A 419 REAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK--IFAATTENSHDYAPAFDADSKNLYYLSYRSLDP 496 (1045)
T ss_dssp SSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE--EEECSCSSSBEEEEEECTTSCEEEEEESCCCCC
T ss_pred CCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc--EEEeeCCCcccCCceEcCCCCEEEEEecccCCc
Confidence 778889999999999876665410 12599999998875 566778888899999999999999999988888
Q ss_pred eeec
Q psy6213 298 RAKN 301 (330)
Q Consensus 298 iw~~ 301 (330)
+|..
T Consensus 497 ~~~~ 500 (1045)
T 1k32_A 497 SPDR 500 (1045)
T ss_dssp EECS
T ss_pred Ccch
Confidence 7763
No 147
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.94 E-value=1.2e-24 Score=179.72 Aligned_cols=261 Identities=7% Similarity=-0.019 Sum_probs=188.9
Q ss_pred eecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEE-EEEcCCCcEEEEECCCCCCCceeEEecc-
Q psy6213 19 AQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHI-ATGATNGAVVVWNLGQISRSKQERVFND- 95 (330)
Q Consensus 19 ~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~~~~~~~~~~~- 95 (330)
++++ ++.|.+||..+++....+...... ..+..++|+| +++.+ +++..++.|.+||+.+ .+....+..
T Consensus 5 v~~~~~~~v~~~d~~~~~~~~~~~~~~~~-----~~~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~---~~~~~~~~~~ 75 (337)
T 1pby_B 5 LAPARPDKLVVIDTEKMAVDKVITIADAG-----PTPMVPMVAP-GGRIAYATVNKSESLVKIDLVT---GETLGRIDLS 75 (337)
T ss_dssp EEEETTTEEEEEETTTTEEEEEEECTTCT-----TCCCCEEECT-TSSEEEEEETTTTEEEEEETTT---CCEEEEEECC
T ss_pred EEcCCCCeEEEEECCCCcEEEEEEcCCCC-----CCccceEEcC-CCCEEEEEeCCCCeEEEEECCC---CCeEeeEEcC
Confidence 4444 999999999998876655432210 0147899999 77654 5666788999999987 455544432
Q ss_pred ----cccceeEEEEEecCCCEEEEEe------------cCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEE
Q psy6213 96 ----HKRTVNKVSFHYVESNWLISGS------------QDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASV 159 (330)
Q Consensus 96 ----~~~~i~~i~~~~~~~~~l~~~~------------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 159 (330)
+...+..++|+| ++++++++. .++.|.+||+.+++....+.. ...+.+++|+|++++ ++++
T Consensus 76 ~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~-l~~~ 152 (337)
T 1pby_B 76 TPEERVKSLFGAALSP-DGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSK-LYGL 152 (337)
T ss_dssp BTTEEEECTTCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSC-EEEE
T ss_pred CcccccccccceEECC-CCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCE-EEEe
Confidence 123678899998 888888875 579999999998888777764 456788999999996 4554
Q ss_pred ecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCC------------------------cEEEEeCCC
Q psy6213 160 SENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDK------------------------TIKVWDLSI 215 (330)
Q Consensus 160 ~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg------------------------~i~i~d~~~ 215 (330)
++.|++||+.+ .+....+..+.. ...+.|+|+++.++..+.++ .|.+||+.+
T Consensus 153 --~~~i~~~d~~~-~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 228 (337)
T 1pby_B 153 --GRDLHVMDPEA-GTLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLET 228 (337)
T ss_dssp --SSSEEEEETTT-TEEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTT
T ss_pred --CCeEEEEECCC-CcEeeeeecccc-CCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCC
Confidence 68999999987 444544443321 12347899988665554332 468999988
Q ss_pred Ccccc-ceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCC
Q psy6213 216 KPSLE-YSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVS 294 (330)
Q Consensus 216 ~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg 294 (330)
++... ....+...+..++|+|++++++++ ++.|.+||+.+++. +..+.. ...+.+++|+|++++|++++.++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-----~~~v~~~d~~~~~~-~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~ 301 (337)
T 1pby_B 229 GEMAMREVRIMDVFYFSTAVNPAKTRAFGA-----YNVLESFDLEKNAS-IKRVPL-PHSYYSVNVSTDGSTVWLGGALG 301 (337)
T ss_dssp CCEEEEEEEECSSCEEEEEECTTSSEEEEE-----ESEEEEEETTTTEE-EEEEEC-SSCCCEEEECTTSCEEEEESBSS
T ss_pred CCceEeecCCCCCceeeEEECCCCCEEEEe-----CCeEEEEECCCCcC-cceecC-CCceeeEEECCCCCEEEEEcCCC
Confidence 75431 122344568889999999985544 68999999988764 444443 35678999999999999999999
Q ss_pred eEeeeecc
Q psy6213 295 IIPRAKNI 302 (330)
Q Consensus 295 ~i~iw~~~ 302 (330)
.|++|+..
T Consensus 302 ~i~v~d~~ 309 (337)
T 1pby_B 302 DLAAYDAE 309 (337)
T ss_dssp EEEEEETT
T ss_pred cEEEEECc
Confidence 99999864
No 148
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.94 E-value=9.9e-25 Score=205.55 Aligned_cols=277 Identities=10% Similarity=0.052 Sum_probs=210.3
Q ss_pred CcccceEEEEe-eCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEE-EE
Q psy6213 3 YLSPVHKHGLK-ADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVV-VW 79 (330)
Q Consensus 3 H~~~v~~~~~s-~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~-iw 79 (330)
|.+.+.+++|+ |||++++.+ ++.+.+|+...++... +..+.. ..+..++|+ +++.|+.++.++.+. +|
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~-~~~~~~------~~~~~~~~s--dg~~l~~~s~~~~l~~~~ 364 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLK-VPEPLR------IRYVRRGGD--TKVAFIHGTREGDFLGIY 364 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEE-CSCCSC------EEEEEECSS--SEEEEEEEETTEEEEEEE
T ss_pred cccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEE-ccCCCc------ceEEeeeEc--CCCeEEEEECCCceEEEE
Confidence 45679999999 999997777 9999999998776443 221111 135889999 778888888788888 88
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEE
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASV 159 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 159 (330)
++.. ... ..+..|...+..++|+| ++++|++++.++.|++||+.+++.......+...+.+++|+|++++ ++++
T Consensus 365 d~~~---~~~-~~l~~~~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~-la~~ 438 (1045)
T 1k32_A 365 DYRT---GKA-EKFEENLGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRF-IAYG 438 (1045)
T ss_dssp ETTT---CCE-EECCCCCCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCE-EEEE
T ss_pred ECCC---CCc-eEecCCccceeeeEECC-CCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCe-EEEE
Confidence 9876 333 33447778999999999 8999999999999999999999888777778888999999999996 5555
Q ss_pred ecC----------CcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcc-----------
Q psy6213 160 SEN----------GTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPS----------- 218 (330)
Q Consensus 160 ~~d----------g~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~----------- 218 (330)
+.+ +.|++||+.+ ++ ...+..|...+..++|+|+|++|+.++.++...+|+......
T Consensus 439 ~~~~~~~~~~~~~~~i~l~d~~~-g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (1045)
T 1k32_A 439 FPLKHGETDGYVMQAIHVYDMEG-RK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVI 516 (1045)
T ss_dssp EEECSSTTCSCCEEEEEEEETTT-TE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEE
T ss_pred ecCccccccCCCCCeEEEEECCC-Cc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEE
Confidence 543 4899999987 33 566777888899999999999999999887777776432210
Q ss_pred --------------------------------ccceeccccceEEEEEcCCCCeEEEE----------eecccCCeEEEE
Q psy6213 219 --------------------------------LEYSINTIASVSRIKWRPQRKFHLAS----------CSLVVDSSVNVW 256 (330)
Q Consensus 219 --------------------------------~~~~~~~~~~v~~~~~~~~~~~l~~~----------~~~~~~~~i~i~ 256 (330)
......+...+..++++|++..+++. .+......|.+|
T Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~ 596 (1045)
T 1k32_A 517 PLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKY 596 (1045)
T ss_dssp ESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEE
T ss_pred EeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEE
Confidence 00111134668899999999865541 111135688899
Q ss_pred EccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 257 DIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 257 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
|+.+++. ..+. ..+.+++|+|||+.|++++.+ .+++|+..
T Consensus 597 d~~~~~~--~~l~---~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~ 636 (1045)
T 1k32_A 597 DVKTRKV--TEVK---NNLTDLRLSADRKTVMVRKDD-GKIYTFPL 636 (1045)
T ss_dssp ETTTCCE--EEEE---EEEEEEEECTTSCEEEEEETT-SCEEEEES
T ss_pred ECCCCcE--EEee---cCcceEEECCCCCEEEEEcCC-cEEEEeCc
Confidence 9988764 3333 568899999999999998866 79999864
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.94 E-value=7.8e-24 Score=175.78 Aligned_cols=251 Identities=8% Similarity=0.069 Sum_probs=171.0
Q ss_pred CcccceEEEEeeCCCeeecC----CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEc-CCCcEE
Q psy6213 3 YLSPVHKHGLKADNGLAQPS----RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGA-TNGAVV 77 (330)
Q Consensus 3 H~~~v~~~~~s~~~~~~~~g----d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~dg~i~ 77 (330)
+...+..++|+|||++++++ ++.|.+|++++++.......... ...+..++|+| ++++|++++ .++.+.
T Consensus 38 ~~~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~-----~~~p~~~a~sp-dg~~l~~~~~~~~~v~ 111 (347)
T 3hfq_A 38 ATQNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAP-----GTPPAYVAVDE-ARQLVYSANYHKGTAE 111 (347)
T ss_dssp ECSCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEE-----SCCCSEEEEET-TTTEEEEEETTTTEEE
T ss_pred ccCCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecC-----CCCCEEEEECC-CCCEEEEEeCCCCEEE
Confidence 34567789999999964433 48999999987664332221111 12247899999 898888777 678999
Q ss_pred EEECCCCCCCceeEEecc---------cccceeEEEEEecCCCEEEEEecCCcEEEEEee-cCceee--eeec-CCCCeE
Q psy6213 78 VWNLGQISRSKQERVFND---------HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR-CQESTK--IFHS-NTESVR 144 (330)
Q Consensus 78 iw~~~~~~~~~~~~~~~~---------~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~--~~~~-~~~~v~ 144 (330)
+|++........+..+.. +...+.+++|+| +++++++...++.|.+||+. +++... .+.. ....+.
T Consensus 112 v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp-dg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~ 190 (347)
T 3hfq_A 112 VMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP-DNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPR 190 (347)
T ss_dssp EEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT-TSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEE
T ss_pred EEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC-CCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCc
Confidence 999964332333333321 123478899999 67777777778899999998 454322 2222 233678
Q ss_pred EEEEcCCCCcEEEEEecCCcEEEEecCCC-ccc--eeeeccCC------CCeEEEEEcCCCCEEE-EEecCCcEEEEeCC
Q psy6213 145 DVEFNPHSPYAFASVSENGTIQQWDVRRP-EKC--FYQFTAHS------GPIFACDWHPEHAWLA-TASRDKTIKVWDLS 214 (330)
Q Consensus 145 ~~~~~~~~~~~~~~~~~dg~i~i~d~~~~-~~~--~~~~~~~~------~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~~ 214 (330)
.++|+|++++++++...++.+.+|++... +.. ...+.... ..+..++|+|+|++|+ +...++.|.+||+.
T Consensus 191 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 191 HLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 89999999976776778899999998741 221 22222222 3488899999999774 55568999999987
Q ss_pred CCcc---ccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEc--cCCC
Q psy6213 215 IKPS---LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI--RRPY 262 (330)
Q Consensus 215 ~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~--~~~~ 262 (330)
.... ......+...+..++|+|+|++++++.. .++.+.+|++ .+++
T Consensus 271 ~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~--~~~~v~v~~~d~~tg~ 321 (347)
T 3hfq_A 271 ADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ--NTDNATLYARDLTSGK 321 (347)
T ss_dssp GGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEET--TTTEEEEEEECTTTCC
T ss_pred CCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEc--CCCcEEEEEEeCCCCe
Confidence 3311 2222223456889999999998777776 5699999955 4444
No 150
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.94 E-value=2.4e-25 Score=189.59 Aligned_cols=201 Identities=15% Similarity=0.206 Sum_probs=153.1
Q ss_pred eeeeeecccCCcEEEEEcCCCcEEEEECCCCCC-------CceeE-----EecccccceeEEEEEecCCCEEE----EEe
Q psy6213 54 CNDVAWSCIEENHIATGATNGAVVVWNLGQISR-------SKQER-----VFNDHKRTVNKVSFHYVESNWLI----SGS 117 (330)
Q Consensus 54 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-------~~~~~-----~~~~~~~~i~~i~~~~~~~~~l~----~~~ 117 (330)
++.+++++ ++.++++++.++ +++|+...... ..... ....+...|.+++|+| ++++|+ +|+
T Consensus 39 ~n~lavs~-~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~lav~~~sgs 115 (434)
T 2oit_A 39 SSLLAVSN-KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSC-DNLTLSACMMSSE 115 (434)
T ss_dssp CBCEEEET-TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECT-TSCEEEEEEEETT
T ss_pred ccEEEEec-CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcC-CCCEEEEEEeccC
Confidence 58899999 889999998887 88987532100 00111 1123556799999998 888888 788
Q ss_pred cCCcEEEEEeecC--------ce---eeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCC
Q psy6213 118 QDGTMRLFDIRCQ--------ES---TKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186 (330)
Q Consensus 118 ~d~~i~i~d~~~~--------~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 186 (330)
.|+.|++||++++ +. ...+.+|...|.+++|+|++..+|++++.||+|++||+++. .......+|...
T Consensus 116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~-~~~~~~~~~~~~ 194 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET-VKVCATLPSTVA 194 (434)
T ss_dssp TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS-EEEEEEECGGGC
T ss_pred CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC-cceeeccCCCCc
Confidence 8999999999765 22 34455688999999999985558999999999999999984 445555668899
Q ss_pred eEEEEEcCCCCEEEEEecCCcEEEEeCCCCcccccee-------ccccceEEEEEcCCCCeEEEEeecccCC------eE
Q psy6213 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI-------NTIASVSRIKWRPQRKFHLASCSLVVDS------SV 253 (330)
Q Consensus 187 i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~~~~~~~~~~------~i 253 (330)
|.+++|+|+|++|++|+.||.|++||.+ ++...... .+...+.+++|++++.++++... .+| .+
T Consensus 195 v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~--~dg~~~~~~~v 271 (434)
T 2oit_A 195 VTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAA--ADGTLETSPDV 271 (434)
T ss_dssp EEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEE--TTCCSSSCCEE
T ss_pred eeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEcc--CCCccCCCCce
Confidence 9999999999999999999999999998 32221111 12348999999999987666555 343 49
Q ss_pred EEEEccCC
Q psy6213 254 NVWDIRRP 261 (330)
Q Consensus 254 ~i~d~~~~ 261 (330)
++|++++.
T Consensus 272 ~i~~l~~~ 279 (434)
T 2oit_A 272 VMALLPKK 279 (434)
T ss_dssp EEEECCCT
T ss_pred EEEEeccC
Confidence 99999865
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.94 E-value=2.9e-23 Score=173.26 Aligned_cols=265 Identities=8% Similarity=0.052 Sum_probs=179.9
Q ss_pred CCeEEEEEcC--CcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCC----CcEEEEECCCC-CCCceeEEecc
Q psy6213 23 RNVFKIFLIK--DTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATN----GAVVVWNLGQI-SRSKQERVFND 95 (330)
Q Consensus 23 d~~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~iw~~~~~-~~~~~~~~~~~ 95 (330)
++.|.+|.++ +++.......+ ...+..++|+| ++++|++++.+ +.|.+|++... ...+.+.....
T Consensus 26 ~~~i~~~~~d~~~g~~~~~~~~~-------~~~p~~l~~sp-dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~ 97 (361)
T 3scy_A 26 SKGIYTFRFNEETGESLPLSDAE-------VANPSYLIPSA-DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKT 97 (361)
T ss_dssp CCEEEEEEEETTTCCEEEEEEEE-------CSCCCSEEECT-TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEEC
T ss_pred CCCEEEEEEeCCCCCEEEeeccc-------CCCCceEEECC-CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEecc
Confidence 6789999775 45544333221 12247899999 99999988875 79999998752 12233333444
Q ss_pred cccceeEEEEEecCCCEEEEEe-cCCcEEEEEeecCceeeee------ec--------CCCCeEEEEEcCCCCcEEEEEe
Q psy6213 96 HKRTVNKVSFHYVESNWLISGS-QDGTMRLFDIRCQESTKIF------HS--------NTESVRDVEFNPHSPYAFASVS 160 (330)
Q Consensus 96 ~~~~i~~i~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~------~~--------~~~~v~~~~~~~~~~~~~~~~~ 160 (330)
+......+++ +++++++++ .++.|.+|++.....+..+ .+ +...+.+++|+|++++++++..
T Consensus 98 ~~~~p~~~~~---dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 174 (361)
T 3scy_A 98 MGADPCYLTT---NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDL 174 (361)
T ss_dssp SSSCEEEEEE---CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEET
T ss_pred CCCCcEEEEE---CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeC
Confidence 4456666666 466666555 6889999999754332211 11 1223578999999997666666
Q ss_pred cCCcEEEEecCCCcc------c------eeeeccCCCCeEEEEEcCCCCEEEEEe-cCCcEEEEeCCCCccc--cce---
Q psy6213 161 ENGTIQQWDVRRPEK------C------FYQFTAHSGPIFACDWHPEHAWLATAS-RDKTIKVWDLSIKPSL--EYS--- 222 (330)
Q Consensus 161 ~dg~i~i~d~~~~~~------~------~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~--~~~--- 222 (330)
.++.|.+|++..... . ......+...+..++|+|+|+++++++ .++.|.+||+.++... ...
T Consensus 175 ~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~ 254 (361)
T 3scy_A 175 GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAAD 254 (361)
T ss_dssp TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESC
T ss_pred CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecC
Confidence 689999999876432 1 111223445678999999999887777 6899999999865321 111
Q ss_pred eccccceEEEEEcCCCCeEEEEeeccc-CCeEEEEEcc--CCCc-cceEeecCCCCeEEEEEecCCCEEEEee-cCCeEe
Q psy6213 223 INTIASVSRIKWRPQRKFHLASCSLVV-DSSVNVWDIR--RPYI-PLASFTEHKDVVSGLAWRGDPQLFIASS-RVSIIP 297 (330)
Q Consensus 223 ~~~~~~v~~~~~~~~~~~l~~~~~~~~-~~~i~i~d~~--~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~s~~-~dg~i~ 297 (330)
..+......++|+|+|++++++.. . ++.|.+|++. ++.. .+..+.. ...+.+++|+|||++|++++ .++.|.
T Consensus 255 ~~~~~~~~~i~~spdg~~l~v~~~--~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~ 331 (361)
T 3scy_A 255 TVNAQGSGDIHLSPDGKYLYASNR--LKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQ 331 (361)
T ss_dssp SSCCCCEEEEEECTTSSEEEEEEC--SSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEE
T ss_pred CCCCCCcccEEECCCCCEEEEECC--CCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEE
Confidence 112345689999999998777765 4 5899999996 3332 2333333 45788999999999888887 678999
Q ss_pred eeec
Q psy6213 298 RAKN 301 (330)
Q Consensus 298 iw~~ 301 (330)
+|+.
T Consensus 332 v~~~ 335 (361)
T 3scy_A 332 IFER 335 (361)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9854
No 152
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=6.6e-24 Score=176.47 Aligned_cols=237 Identities=12% Similarity=0.059 Sum_probs=182.5
Q ss_pred eeeeeecccCCcEEEEEcC-------CCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCC-EEEEEecCCcEEEE
Q psy6213 54 CNDVAWSCIEENHIATGAT-------NGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESN-WLISGSQDGTMRLF 125 (330)
Q Consensus 54 v~~~~~~~~~~~~l~~~~~-------dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~-~l~~~~~d~~i~i~ 125 (330)
+..++|+| +++++++++. ++.|.+||..+ .+....+.. ...+..++|+| +++ ++++...++.|.+|
T Consensus 43 ~~~~~~s~-dg~~l~~~~~~~~~~~~~~~v~~~d~~~---~~~~~~~~~-~~~~~~~~~s~-dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 43 AYEMAYSQ-QENALWLATSQSRKLDKGGVVYRLDPVT---LEVTQAIHN-DLKPFGATINN-TTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp EEEEEEET-TTTEEEEEECCCTTTEESEEEEEECTTT---CCEEEEEEE-SSCCCSEEEET-TTTEEEEEETTTTEEEEE
T ss_pred ccceEECC-CCCEEEEEcCCCcCCCCCccEEEEcCCC---CeEEEEEec-CCCcceEEECC-CCCEEEEEecCCCEEEEE
Confidence 57899999 8888877764 56899999987 555555543 34578899998 666 45555667999999
Q ss_pred EeecCceeeeeecCCCC---------eEEEEEcCCCCcEEEEE-ecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCC
Q psy6213 126 DIRCQESTKIFHSNTES---------VRDVEFNPHSPYAFASV-SENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE 195 (330)
Q Consensus 126 d~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~~~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~ 195 (330)
|..+++.+..+..+... +.+++|+|++++++++. +.++.|.+||+.+ .+....+..+...+..++|+|+
T Consensus 117 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~s~d 195 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGN-IKLKTAIQNTGKMSTGLALDSE 195 (353)
T ss_dssp ETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTT-TEEEEEECCCCTTCCCCEEETT
T ss_pred eCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCC-CceEEEecCCCCccceEEECCC
Confidence 99999888777654322 78899999999655554 3578899999987 5556666645666889999999
Q ss_pred CCEEEEEecCCcEEEEeCCCCccccceec----cccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecC
Q psy6213 196 HAWLATASRDKTIKVWDLSIKPSLEYSIN----TIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEH 271 (330)
Q Consensus 196 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~ 271 (330)
++++++++.++.+.+||..+++....... +...+..++|+|++++++++.. .++.|.+||+.+++. +..+...
T Consensus 196 g~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~--~~~~v~~~d~~~~~~-~~~~~~~ 272 (353)
T 3vgz_A 196 GKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS--KAAEVLVVDTRNGNI-LAKVAAP 272 (353)
T ss_dssp TTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES--SSSEEEEEETTTCCE-EEEEECS
T ss_pred CCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC--CCCEEEEEECCCCcE-EEEEEcC
Confidence 99999999999999999998855433322 3456788999999998777776 579999999988875 5555443
Q ss_pred CCCeEEEEEecCCCEEEEee-cCCeEeeeecc
Q psy6213 272 KDVVSGLAWRGDPQLFIASS-RVSIIPRAKNI 302 (330)
Q Consensus 272 ~~~v~~~~~~~~~~~l~s~~-~dg~i~iw~~~ 302 (330)
. ..+++|+|+++.++.++ .++.|.+|+..
T Consensus 273 ~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 302 (353)
T 3vgz_A 273 E--SLAVLFNPARNEAYVTHRQAGKVSVIDAK 302 (353)
T ss_dssp S--CCCEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred C--CceEEECCCCCEEEEEECCCCeEEEEECC
Confidence 3 36799999999666555 68999999854
No 153
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.94 E-value=8.4e-25 Score=198.36 Aligned_cols=270 Identities=10% Similarity=0.094 Sum_probs=182.8
Q ss_pred cceEEEEeeCCCeeecC-CCeEEEEEcCCcce--eeeeceeecc---------ccccccceeeeeecccCCcEEEEEcCC
Q psy6213 6 PVHKHGLKADNGLAQPS-RNVFKIFLIKDTEF--VETHNLRVGK---------NINLNFSCNDVAWSCIEENHIATGATN 73 (330)
Q Consensus 6 ~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~--~~~~~~~~~~---------~~~~~~~v~~~~~~~~~~~~l~~~~~d 73 (330)
.+..+.|. ++.++..+ ++ | +||+.+++. .......... .......+.+++|+| + +.++.+. +
T Consensus 27 ~~~~~~w~-g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~sp-d-~~~~~~~-~ 100 (706)
T 2z3z_A 27 YVVGLQWM-GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAG-R-GLVVLFT-Q 100 (706)
T ss_dssp -CTTCEEE-TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETT-T-TEEEEEE-T
T ss_pred cCCCCcCc-CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECC-C-CeEEEEE-C
Confidence 35667888 44455555 66 8 999999876 3322211100 000013479999999 6 5555543 5
Q ss_pred CcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeec-----CceeeeeecCCCC------
Q psy6213 74 GAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC-----QESTKIFHSNTES------ 142 (330)
Q Consensus 74 g~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~-----~~~~~~~~~~~~~------ 142 (330)
+.+++||+.+ .+. ..+..+...+.+++|+| +++.|+++ .++.|++||+.+ ++.......+...
T Consensus 101 ~~i~~~d~~~---~~~-~~l~~~~~~~~~~~~Sp-dG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~ 174 (706)
T 2z3z_A 101 GGLVGFDMLA---RKV-TYLFDTNEETASLDFSP-VGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQA 174 (706)
T ss_dssp TEEEEEETTT---TEE-EEEECCTTCCTTCEECT-TSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSC
T ss_pred CEEEEEECCC---Cce-EEccCCcccccCCcCCC-CCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccc
Confidence 9999999987 333 34445677899999999 88888885 689999999998 7765544433332
Q ss_pred --------eEEEEEcCCCCcEEEEEe---------------------------------cCCcEEEEecCCCccceeee-
Q psy6213 143 --------VRDVEFNPHSPYAFASVS---------------------------------ENGTIQQWDVRRPEKCFYQF- 180 (330)
Q Consensus 143 --------v~~~~~~~~~~~~~~~~~---------------------------------~dg~i~i~d~~~~~~~~~~~- 180 (330)
+.+++|+|+|++ |++++ .+..|++||+.++ +.....
T Consensus 175 ~~~ee~~~~~~~~~SpDg~~-la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~-~~~~~~~ 252 (706)
T 2z3z_A 175 VHQREFGIEKGTFWSPKGSC-LAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATG-KTVYLQT 252 (706)
T ss_dssp CGGGCTTCCCSEEECTTSSE-EEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTT-EEEECCC
T ss_pred hhhhhcCCCceEEECCCCCE-EEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCC-ceEeecc
Confidence 488999999995 66665 3467999999873 322222
Q ss_pred -ccCCCCeEEEEEcCCCCEEEEEecCC-----cEEEEeCCCCcccccee--cccc---ceEEEEEcC--CCCeEEEEeec
Q psy6213 181 -TAHSGPIFACDWHPEHAWLATASRDK-----TIKVWDLSIKPSLEYSI--NTIA---SVSRIKWRP--QRKFHLASCSL 247 (330)
Q Consensus 181 -~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~~~~~~~--~~~~---~v~~~~~~~--~~~~l~~~~~~ 247 (330)
..|...+.+++|+|||+.|++++.++ .|++||+.+++...... .... .+..++|+| +|++ +++++
T Consensus 253 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~-l~~~~- 330 (706)
T 2z3z_A 253 GEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQF-IWQSR- 330 (706)
T ss_dssp CSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEE-EEEEC-
T ss_pred CCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEE-EEEEc-
Confidence 24667799999999999999988776 89999998873322222 1111 246789999 9996 55555
Q ss_pred ccCCeEEEEEcc-CCCccceEeecCCCCeEE-EEEecCCCEEEEeecC
Q psy6213 248 VVDSSVNVWDIR-RPYIPLASFTEHKDVVSG-LAWRGDPQLFIASSRV 293 (330)
Q Consensus 248 ~~~~~i~i~d~~-~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~s~~~d 293 (330)
.++.+++|++. ++.. ...+..+...+.. ++|+|+++.|+.++.+
T Consensus 331 -~~g~~~l~~~~~~~~~-~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 331 -RDGWNHLYLYDTTGRL-IRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp -TTSSCEEEEEETTSCE-EEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred -cCCccEEEEEECCCCE-EEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 58889999887 3433 6667777777877 7999999988766554
No 154
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.93 E-value=3.6e-24 Score=176.82 Aligned_cols=248 Identities=9% Similarity=0.045 Sum_probs=180.3
Q ss_pred cceEEEEeeCCCe-eec-C-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEc-----------
Q psy6213 6 PVHKHGLKADNGL-AQP-S-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGA----------- 71 (330)
Q Consensus 6 ~v~~~~~s~~~~~-~~~-g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~----------- 71 (330)
.+..++|+|+|++ +++ . ++.|.+||+.+++....+...... .....+..++|+| ++++++++.
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~ 111 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPE--ERVKSLFGAALSP-DGKTLAIYESPVRLELTHFE 111 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTT--EEEECTTCEEECT-TSSEEEEEEEEEEECSSCEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcc--cccccccceEECC-CCCEEEEEeccccccccccc
Confidence 4789999999986 344 4 899999999998876655432200 0011247899999 888888885
Q ss_pred -CCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcC
Q psy6213 72 -TNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNP 150 (330)
Q Consensus 72 -~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~ 150 (330)
.++.|.+||+.+ .+....+.. ...+.+++|+| ++++++++ ++.|++||+.+++....+..+.. ...+.|+|
T Consensus 112 ~~~~~i~v~d~~~---~~~~~~~~~-~~~~~~~~~s~-dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~s~ 183 (337)
T 1pby_B 112 VQPTRVALYDAET---LSRRKAFEA-PRQITMLAWAR-DGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSW-EAETYAQP 183 (337)
T ss_dssp ECCCEEEEEETTT---TEEEEEEEC-CSSCCCEEECT-TSSCEEEE--SSSEEEEETTTTEEEEEECSTTT-TTTTBCCC
T ss_pred ccCceEEEEECCC---CcEEEEEeC-CCCcceeEECC-CCCEEEEe--CCeEEEEECCCCcEeeeeecccc-CCCceeCC
Confidence 579999999987 555555543 45678899998 77877777 68899999999888777664431 11237899
Q ss_pred CCCcEEEEEecCC-----------------------cEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCc
Q psy6213 151 HSPYAFASVSENG-----------------------TIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKT 207 (330)
Q Consensus 151 ~~~~~~~~~~~dg-----------------------~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~ 207 (330)
++..+++++..++ .|.+||+.+.......+..+...+.+++|+|++++++++ ++.
T Consensus 184 dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~ 261 (337)
T 1pby_B 184 DVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNV 261 (337)
T ss_dssp BCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESE
T ss_pred CccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCe
Confidence 9886544443333 468999987443333445566778899999999999888 689
Q ss_pred EEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecC
Q psy6213 208 IKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEH 271 (330)
Q Consensus 208 i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~ 271 (330)
|.+||+.+++... .......+.+++|+|+++++++++ .++.|.+||+.+++. +..+..+
T Consensus 262 v~~~d~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~~~~---~~~~i~v~d~~~~~~-~~~~~~~ 320 (337)
T 1pby_B 262 LESFDLEKNASIK-RVPLPHSYYSVNVSTDGSTVWLGG---ALGDLAAYDAETLEK-KGQVDLP 320 (337)
T ss_dssp EEEEETTTTEEEE-EEECSSCCCEEEECTTSCEEEEES---BSSEEEEEETTTCCE-EEEEECG
T ss_pred EEEEECCCCcCcc-eecCCCceeeEEECCCCCEEEEEc---CCCcEEEEECcCCcE-EEEEEcC
Confidence 9999998874433 333445678999999999877664 599999999998865 5555443
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.93 E-value=2e-24 Score=196.29 Aligned_cols=274 Identities=9% Similarity=0.010 Sum_probs=193.8
Q ss_pred eEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcC---------CCcEE
Q psy6213 8 HKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGAT---------NGAVV 77 (330)
Q Consensus 8 ~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~---------dg~i~ 77 (330)
..++|+|||++++++ |+.|++||+.+++.......+... ...+.+++||| ++++|++++. ++.|+
T Consensus 19 ~~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~----~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 19 FFPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMK----SVNASNYGLSP-DRQFVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CCCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHH----TTTCSEEEECT-TSSEEEEEEEEEECSSSCEEEEEE
T ss_pred CccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEcccccc----ccceeeEEECC-CCCeEEEEecCceeEEeecceEEE
Confidence 378999999887777 999999999998866554433221 11258999999 9999998876 68999
Q ss_pred EEECCCCCCCcee--EEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeee-cCCCCe-----------
Q psy6213 78 VWNLGQISRSKQE--RVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFH-SNTESV----------- 143 (330)
Q Consensus 78 iw~~~~~~~~~~~--~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v----------- 143 (330)
+||+.+ ++.. ..+ ...+..++|+| +++.|+.+. ++.|++||+.+++...... ++...+
T Consensus 94 ~~d~~~---g~~~~~~~l---~~~~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~e 165 (719)
T 1z68_A 94 IYDLSN---GEFVRGNEL---PRPIQYLCWSP-VGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEE 165 (719)
T ss_dssp EEETTT---TEECCSSCC---CSSBCCEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHH
T ss_pred EEECCC---Cccccceec---CcccccceECC-CCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeee
Confidence 999987 3331 112 25688999999 888888876 7899999998877654332 222212
Q ss_pred ------EEEEEcCCCCcEEEEEecCC----------------------------------cEEEEecCCCccce------
Q psy6213 144 ------RDVEFNPHSPYAFASVSENG----------------------------------TIQQWDVRRPEKCF------ 177 (330)
Q Consensus 144 ------~~~~~~~~~~~~~~~~~~dg----------------------------------~i~i~d~~~~~~~~------ 177 (330)
.+++|+|+|++ |++++.|. .|++||+.++ ...
T Consensus 166 e~~~~~~~~~wSPDG~~-la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~-~~~~~~~~~ 243 (719)
T 1z68_A 166 EMLATKYALWWSPNGKF-LAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYP-AYVGPQEVP 243 (719)
T ss_dssp HTTCSSCCEEECTTSSE-EEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCH-HHHCCEECC
T ss_pred ecccCcccEEECCCCCE-EEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCC-CccceeEcc
Confidence 48999999995 66655432 7889999873 321
Q ss_pred --eeeccCCCCeEEEEEcCCCCEEEEEecCC----cEEEEe----CCCCccccce----eccccceE-----EEEEcCCC
Q psy6213 178 --YQFTAHSGPIFACDWHPEHAWLATASRDK----TIKVWD----LSIKPSLEYS----INTIASVS-----RIKWRPQR 238 (330)
Q Consensus 178 --~~~~~~~~~i~~~~~~~~~~~l~~~~~dg----~i~i~d----~~~~~~~~~~----~~~~~~v~-----~~~~~~~~ 238 (330)
..+..|...+.+++|+||++++++....+ .|.+|| ..+++..... ..+...+. .+.|+|||
T Consensus 244 ~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg 323 (719)
T 1z68_A 244 VPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDA 323 (719)
T ss_dssp CCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTS
T ss_pred CCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCC
Confidence 12345778899999999988777754332 488899 7776544333 24455555 78999999
Q ss_pred CeEEEE-eecccCC--eEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecC-----CeEeeeec
Q psy6213 239 KFHLAS-CSLVVDS--SVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRV-----SIIPRAKN 301 (330)
Q Consensus 239 ~~l~~~-~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iw~~ 301 (330)
+.++.. .. .++ .|.+||+.+++ ...+..+...+..+.+. +++.|+..+.+ +..++|..
T Consensus 324 ~~l~~~~~~--~~g~~~l~~~~~~~~~--~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~ 389 (719)
T 1z68_A 324 ISYYKIFSD--KDGYKHIHYIKDTVEN--AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRI 389 (719)
T ss_dssp SCEEEEEEC--TTSCEEEEEESSCSTT--CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEE
T ss_pred CeEEEEEEc--cCCceEEEEEECCCCc--eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEE
Confidence 975553 33 244 67777877654 45565666678888877 88877777665 78888864
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.92 E-value=5.1e-24 Score=188.97 Aligned_cols=232 Identities=9% Similarity=0.010 Sum_probs=174.3
Q ss_pred cceeeeeecccCCcEEEEEcC-CCcEEEEECCCCCCCceeEEecccc-cceeEEEEEecCCCEEEEEec---CCcEEEEE
Q psy6213 52 FSCNDVAWSCIEENHIATGAT-NGAVVVWNLGQISRSKQERVFNDHK-RTVNKVSFHYVESNWLISGSQ---DGTMRLFD 126 (330)
Q Consensus 52 ~~v~~~~~~~~~~~~l~~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~-~~i~~i~~~~~~~~~l~~~~~---d~~i~i~d 126 (330)
.+|.+++|+| +++.||+++. ||+++||+++. +.. ..+..+. ..+..++|+| + +++++++. +....+|.
T Consensus 22 ~~~~~~~~~~-DG~~la~~s~~~g~~~lw~~~~---g~~-~~lt~~~~~~~~~~~~sp-d-~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 22 VEKYSLQGVV-DGDKLLVVGFSEGSVNAYLYDG---GET-VKLNREPINSVLDPHYGV-G-RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp SCEEEEEEEE-TTTEEEEEEEETTEEEEEEEET---TEE-EECCSSCCSEECEECTTC-S-EEEEEEECSTTSCCEEEEE
T ss_pred cchheeecCC-CCCeEEEEEccCCceeEEEEcC---CCc-EeeecccccccccccCCC-C-eEEEEeccCCCCcceEEEE
Confidence 4579999999 9999998877 99999999854 333 4444454 6899999998 5 77777765 45667776
Q ss_pred eec--CceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEec
Q psy6213 127 IRC--QESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASR 204 (330)
Q Consensus 127 ~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 204 (330)
++. ......+.. .......+|+|+++.++++...++.+.+||+.+ ++..... .+.. .+++|+|||++|++++.
T Consensus 95 ~~~~~~g~~~~l~~-~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~-g~~~~l~-~~~~--~~~~~spDG~~la~~~~ 169 (582)
T 3o4h_A 95 VNTSRPGEEQRLEA-VKPMRILSGVDTGEAVVFTGATEDRVALYALDG-GGLRELA-RLPG--FGFVSDIRGDLIAGLGF 169 (582)
T ss_dssp EETTSTTCCEECTT-SCSBEEEEEEECSSCEEEEEECSSCEEEEEEET-TEEEEEE-EESS--CEEEEEEETTEEEEEEE
T ss_pred EeccCCCccccccC-CCCceeeeeCCCCCeEEEEecCCCCceEEEccC-CcEEEee-cCCC--ceEEECCCCCEEEEEEE
Confidence 654 222223332 234557789999876666666666677999987 3333333 2333 78999999999998887
Q ss_pred C----CcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCC--eEEEEEccCCCccceEeecCCCCeEEE
Q psy6213 205 D----KTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDS--SVNVWDIRRPYIPLASFTEHKDVVSGL 278 (330)
Q Consensus 205 d----g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~--~i~i~d~~~~~~~~~~~~~~~~~v~~~ 278 (330)
+ +.|++||+.+++. .....+...+..++|+|||+.++ ++. .++ .|++||+.+++. . .+..|...+..+
T Consensus 170 ~~~~~~~i~~~d~~~g~~-~~l~~~~~~~~~~~~SpDG~~l~-~~~--~~~~~~i~~~d~~~~~~-~-~~~~~~~~~~~~ 243 (582)
T 3o4h_A 170 FGGGRVSLFTSNLSSGGL-RVFDSGEGSFSSASISPGMKVTA-GLE--TAREARLVTVDPRDGSV-E-DLELPSKDFSSY 243 (582)
T ss_dssp EETTEEEEEEEETTTCCC-EEECCSSCEEEEEEECTTSCEEE-EEE--CSSCEEEEEECTTTCCE-E-ECCCSCSHHHHH
T ss_pred cCCCCeEEEEEcCCCCCc-eEeecCCCccccceECCCCCEEE-Ecc--CCCeeEEEEEcCCCCcE-E-EccCCCcChhhh
Confidence 7 7899999988744 34556677889999999999866 554 577 899999998875 3 667777777777
Q ss_pred E--------EecCCCEEEEeecCCeEeeeec
Q psy6213 279 A--------WRGDPQLFIASSRVSIIPRAKN 301 (330)
Q Consensus 279 ~--------~~~~~~~l~s~~~dg~i~iw~~ 301 (330)
+ |+|||.++++++.||.+++|..
T Consensus 244 ~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 244 RPTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CCSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred hhccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 7 9999999999999999999986
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.92 E-value=4.2e-22 Score=166.22 Aligned_cols=265 Identities=11% Similarity=0.114 Sum_probs=170.0
Q ss_pred CcccceEEEEeeCCCeeecC--C----CeEEEEEcCC--cceeeeeceeeccccccccceeeeeecccCCcEEEEEc-CC
Q psy6213 3 YLSPVHKHGLKADNGLAQPS--R----NVFKIFLIKD--TEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGA-TN 73 (330)
Q Consensus 3 H~~~v~~~~~s~~~~~~~~g--d----~~i~iw~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d 73 (330)
|...+..++|+|||+++.++ + +.+.+|+++. ++........... .....+++ ++++|++++ .+
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~-----~~p~~~~~---dg~~l~~~~~~~ 119 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMG-----ADPCYLTT---NGKNIVTANYSG 119 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSS-----SCEEEEEE---CSSEEEEEETTT
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCC-----CCcEEEEE---CCCEEEEEECCC
Confidence 34567789999999984444 4 7999999876 4433322222111 12355666 455555554 68
Q ss_pred CcEEEEECCCCCCCceeEEe---c--------ccccceeEEEEEecCCCEEEEEe-cCCcEEEEEeecCce------e--
Q psy6213 74 GAVVVWNLGQISRSKQERVF---N--------DHKRTVNKVSFHYVESNWLISGS-QDGTMRLFDIRCQES------T-- 133 (330)
Q Consensus 74 g~i~iw~~~~~~~~~~~~~~---~--------~~~~~i~~i~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~------~-- 133 (330)
+.+.+|++............ . .+...+.+++|+| +++++++++ .++.|.+|++..... +
T Consensus 120 ~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~ 198 (361)
T 3scy_A 120 GSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITP-DGKYLLADDLGTDQIHKFNINPNANADNKEKFLT 198 (361)
T ss_dssp TEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEE
T ss_pred CEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECC-CCCEEEEEeCCCCEEEEEEEcCCCCcccccceee
Confidence 89999999753222211111 1 1123457899999 777655544 588999999875432 1
Q ss_pred -----eeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccc--eeee---ccCCCCeEEEEEcCCCCEEEEEe
Q psy6213 134 -----KIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC--FYQF---TAHSGPIFACDWHPEHAWLATAS 203 (330)
Q Consensus 134 -----~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~--~~~~---~~~~~~i~~~~~~~~~~~l~~~~ 203 (330)
.........+..++|+|++++++++...++.|.+||+.+ +.. +..+ ..+......++|+|+|++|+++.
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~-g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~ 277 (361)
T 3scy_A 199 KGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYAD-GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASN 277 (361)
T ss_dssp EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEET-TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEE
T ss_pred cccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecC-CceEEeEEEecCCCCCCCcccEEECCCCCEEEEEC
Confidence 112224456789999999996555555789999999985 322 2222 23335578999999999987776
Q ss_pred cC--CcEEEEeCC--CCcc-ccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEcc--CCCccceEe--ecCCCC
Q psy6213 204 RD--KTIKVWDLS--IKPS-LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIR--RPYIPLASF--TEHKDV 274 (330)
Q Consensus 204 ~d--g~i~i~d~~--~~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~--~~~~~~~~~--~~~~~~ 274 (330)
.+ +.|.+|++. +++. ..........+..++|+|+|++++++.. .++.|.+|++. +++. ... ..+...
T Consensus 278 ~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~~--~~~~v~v~~~d~~~g~~--~~~~~~~~~~~ 353 (361)
T 3scy_A 278 RLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVACR--DTNVIQIFERDQATGLL--TDIKKDIKVDK 353 (361)
T ss_dssp CSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEET--TTTEEEEEEECTTTCCE--EECSCCEECSS
T ss_pred CCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEEC--CCCCEEEEEEECCCCcE--eecceeeeCCC
Confidence 54 899999996 3321 1122222456889999999998888776 58999997654 4543 222 223457
Q ss_pred eEEEEEe
Q psy6213 275 VSGLAWR 281 (330)
Q Consensus 275 v~~~~~~ 281 (330)
+.|+.|.
T Consensus 354 p~~v~~~ 360 (361)
T 3scy_A 354 PVCLKFV 360 (361)
T ss_dssp EEEEEEE
T ss_pred CeEEEEc
Confidence 8888885
No 158
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.92 E-value=3.8e-23 Score=174.21 Aligned_cols=273 Identities=10% Similarity=0.029 Sum_probs=180.2
Q ss_pred EEEeeCCCeeecC---CC--eEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCC
Q psy6213 10 HGLKADNGLAQPS---RN--VFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQI 84 (330)
Q Consensus 10 ~~~s~~~~~~~~g---d~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 84 (330)
.+|+|||++++.. ++ .|.+||+++++.......+... +..++|+| +++.|+.++.++.|++||+.+
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~-------~~~~~~sp-dg~~l~~~~~~~~l~~~d~~~- 111 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDN-------TFGGFLSP-DDDALFYVKDGRNLMRVDLAT- 111 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBC-------SSSCEECT-TSSEEEEEETTTEEEEEETTT-
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCC-------ccceEEcC-CCCEEEEEeCCCeEEEEECCC-
Confidence 7899999984433 45 4888899888766544333221 23578999 999999999999999999988
Q ss_pred CCCceeEEecccccceeEEEE--EecCCCEEEEEe----------------------cCCcEEEEEeecCceeeeeecCC
Q psy6213 85 SRSKQERVFNDHKRTVNKVSF--HYVESNWLISGS----------------------QDGTMRLFDIRCQESTKIFHSNT 140 (330)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~i~~--~~~~~~~l~~~~----------------------~d~~i~i~d~~~~~~~~~~~~~~ 140 (330)
.+....+..+...+....| +| ++.+++... .+..|++||+.+++..... .+.
T Consensus 112 --g~~~~~~~~~~~~~~~~~~~~~~-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~ 187 (388)
T 3pe7_A 112 --LEENVVYQVPAEWVGYGTWVANS-DCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL-QEN 187 (388)
T ss_dssp --CCEEEEEECCTTEEEEEEEEECT-TSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE-EES
T ss_pred --CcceeeeechhhcccccceeECC-CCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEee-cCC
Confidence 4444445555554544443 66 777776432 3467999999988654443 456
Q ss_pred CCeEEEEEcC-CCCcEEEEEecC------CcEEEEecCCCccceeeeccCC--CCeEEEEEcCCCCEEEEEec-CC----
Q psy6213 141 ESVRDVEFNP-HSPYAFASVSEN------GTIQQWDVRRPEKCFYQFTAHS--GPIFACDWHPEHAWLATASR-DK---- 206 (330)
Q Consensus 141 ~~v~~~~~~~-~~~~~~~~~~~d------g~i~i~d~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~-dg---- 206 (330)
..+..++|+| +++. ++....+ ..|.++|... .. ...+..+. ..+..+.|+|||+.|+..+. ++
T Consensus 188 ~~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~-~~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 264 (388)
T 3pe7_A 188 QWLGHPIYRPYDDST-VAFCHEGPHDLVDARMWLINEDG-TN-MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDR 264 (388)
T ss_dssp SCEEEEEEETTEEEE-EEEEECSCTTTSSCSEEEEETTS-CC-CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCE
T ss_pred ccccccEECCCCCCE-EEEEEecCCCCCcceEEEEeCCC-Cc-eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcc
Confidence 6789999999 9985 5544432 3678888764 22 33343343 35778999999997765443 22
Q ss_pred cEEEEeCCCCccccceeccc-----cceEEEEEcCCCCeEEEEeec------ccCCeEEEEEccCCCccceEeecCCC--
Q psy6213 207 TIKVWDLSIKPSLEYSINTI-----ASVSRIKWRPQRKFHLASCSL------VVDSSVNVWDIRRPYIPLASFTEHKD-- 273 (330)
Q Consensus 207 ~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~l~~~~~~------~~~~~i~i~d~~~~~~~~~~~~~~~~-- 273 (330)
.|++||+.+++......... .......|+|||+.++.+... ..+..|++||+.+++ ...+..+..
T Consensus 265 ~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~l~~~~~~~ 342 (388)
T 3pe7_A 265 FIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT--QHRVARHDTSW 342 (388)
T ss_dssp EEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE--EEEEEECCCCC
T ss_pred eEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc--eEEeccccCcc
Confidence 39999998875322111110 001123799999986655320 147799999998875 345555555
Q ss_pred ---------CeEEEEEecCCCEEEEee-cCCeEeeee
Q psy6213 274 ---------VVSGLAWRGDPQLFIASS-RVSIIPRAK 300 (330)
Q Consensus 274 ---------~v~~~~~~~~~~~l~s~~-~dg~i~iw~ 300 (330)
.+.+++|+|||+.|+.++ .+|...+|.
T Consensus 343 ~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~ 379 (388)
T 3pe7_A 343 KVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYL 379 (388)
T ss_dssp CCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred cccccccccCCCCccCCCCCCEEEEEecCCCceeEEE
Confidence 578899999999888766 467777774
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.91 E-value=3e-22 Score=166.12 Aligned_cols=238 Identities=10% Similarity=0.065 Sum_probs=170.4
Q ss_pred EEEEeeCCCe-eecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEE-EEEcCCCcEEEEECCCCC
Q psy6213 9 KHGLKADNGL-AQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHI-ATGATNGAVVVWNLGQIS 85 (330)
Q Consensus 9 ~~~~s~~~~~-~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l-~~~~~dg~i~iw~~~~~~ 85 (330)
.+++++++++ ++++ ++.|.+||..+++....+..+.. ..+..++|+| +++.+ +++..++.|.+||+.+
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~------~~~~~~~~s~-dg~~~~v~~~~~~~i~~~d~~t-- 74 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDK------FGPGTAMMAP-DNRTAYVLNNHYGDIYGIDLDT-- 74 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSC------CSSCEEEECT-TSSEEEEEETTTTEEEEEETTT--
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCC------CCCceeEECC-CCCEEEEEeCCCCcEEEEeCCC--
Confidence 4577888888 4445 99999999999887766544321 1247899999 77755 5566789999999987
Q ss_pred CCceeEEeccc------ccceeEEEEEecCCCEEEEEecC------------CcEEEEEeecCce---eeeeecCCCCeE
Q psy6213 86 RSKQERVFNDH------KRTVNKVSFHYVESNWLISGSQD------------GTMRLFDIRCQES---TKIFHSNTESVR 144 (330)
Q Consensus 86 ~~~~~~~~~~~------~~~i~~i~~~~~~~~~l~~~~~d------------~~i~i~d~~~~~~---~~~~~~~~~~v~ 144 (330)
.+....+... ...+..++|+| +++++++++.+ +.|.+||+.+++. +..+. +...+.
T Consensus 75 -~~~~~~~~~~~~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~ 151 (349)
T 1jmx_B 75 -CKNTFHANLSSVPGEVGRSMYSFAISP-DGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVY 151 (349)
T ss_dssp -TEEEEEEESCCSTTEEEECSSCEEECT-TSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCC
T ss_pred -CcEEEEEEcccccccccccccceEECC-CCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCccc
Confidence 5555544422 23478999998 88888888865 8999999988543 33343 344688
Q ss_pred EEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccC-----------------------------------------
Q psy6213 145 DVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAH----------------------------------------- 183 (330)
Q Consensus 145 ~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~----------------------------------------- 183 (330)
+++|+|+++ +++ ++ +.|++||+.+. +....+..+
T Consensus 152 ~~~~s~dg~-l~~-~~--~~i~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 226 (349)
T 1jmx_B 152 LMRAADDGS-LYV-AG--PDIYKMDVKTG-KYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDP 226 (349)
T ss_dssp CEEECTTSC-EEE-ES--SSEEEECTTTC-CEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------
T ss_pred ceeECCCCc-EEE-cc--CcEEEEeCCCC-ceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCc
Confidence 999999998 555 33 44999999873 333333211
Q ss_pred ---------------------------CCCeEEEEEcC-CCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEc
Q psy6213 184 ---------------------------SGPIFACDWHP-EHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWR 235 (330)
Q Consensus 184 ---------------------------~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 235 (330)
...+..++|+| ++++++++ ++.|.+||+.+++.... ......+..++|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~-~~~~~~~~~~~~s 303 (349)
T 1jmx_B 227 ATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKA-ANLDHTYYCVAFD 303 (349)
T ss_dssp CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEE-EECSSCCCEEEEC
T ss_pred cccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEE-EcCCCCccceEEC
Confidence 11345677889 99998888 78999999998744333 3334567899999
Q ss_pred CCCCeEEEEeecccCCeEEEEEccCCCccceEeec
Q psy6213 236 PQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTE 270 (330)
Q Consensus 236 ~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~ 270 (330)
|+++++++++ .++.|++||+.+.+. +..+..
T Consensus 304 ~dg~~l~~~~---~~~~v~v~d~~~~~~-~~~~~~ 334 (349)
T 1jmx_B 304 KKGDKLYLGG---TFNDLAVFNPDTLEK-VKNIKL 334 (349)
T ss_dssp SSSSCEEEES---BSSEEEEEETTTTEE-EEEEEC
T ss_pred CCCCEEEEec---CCCeEEEEeccccce-eeeeec
Confidence 9999877754 489999999988765 555443
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.91 E-value=6.6e-22 Score=164.04 Aligned_cols=231 Identities=6% Similarity=-0.016 Sum_probs=167.6
Q ss_pred eeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccc-cceeEEEEEecCCCEE-EEEecCCcEEEEEeecCce
Q psy6213 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHK-RTVNKVSFHYVESNWL-ISGSQDGTMRLFDIRCQES 132 (330)
Q Consensus 55 ~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~~i~~i~~~~~~~~~l-~~~~~d~~i~i~d~~~~~~ 132 (330)
+.+++++ ++.++++++.++.|.+||..+ .+....+..+. ..+..++|+| +++++ +++..++.|.+||+.+++.
T Consensus 3 ~g~~~~~-~~~~~v~~~~~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~~~s~-dg~~~~v~~~~~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 3 TGPALKA-GHEYMIVTNYPNNLHVVDVAS---DTVYKSCVMPDKFGPGTAMMAP-DNRTAYVLNNHYGDIYGIDLDTCKN 77 (349)
T ss_dssp -CCCCCT-TCEEEEEEETTTEEEEEETTT---TEEEEEEECSSCCSSCEEEECT-TSSEEEEEETTTTEEEEEETTTTEE
T ss_pred ccccccC-CCEEEEEeCCCCeEEEEECCC---CcEEEEEecCCCCCCceeEECC-CCCEEEEEeCCCCcEEEEeCCCCcE
Confidence 4567777 889999999999999999987 56666655432 2578899998 66655 5556789999999999888
Q ss_pred eeeeecCC------CCeEEEEEcCCCCcEEEEEecC------------CcEEEEecCCCcc--ceeeeccCCCCeEEEEE
Q psy6213 133 TKIFHSNT------ESVRDVEFNPHSPYAFASVSEN------------GTIQQWDVRRPEK--CFYQFTAHSGPIFACDW 192 (330)
Q Consensus 133 ~~~~~~~~------~~v~~~~~~~~~~~~~~~~~~d------------g~i~i~d~~~~~~--~~~~~~~~~~~i~~~~~ 192 (330)
...+.... ..+..++|+|++++ +++++.+ +.|.+||+.++.. .+..+. +...+.+++|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~ 155 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKE-VYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRA 155 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSE-EEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEE
T ss_pred EEEEEcccccccccccccceEECCCCCE-EEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeE
Confidence 77766432 23788999999995 5555544 8999999986321 122233 3446889999
Q ss_pred cCCCCEEEEEecCCcEEEEeCCCCccccceecc-----------------------------------------------
Q psy6213 193 HPEHAWLATASRDKTIKVWDLSIKPSLEYSINT----------------------------------------------- 225 (330)
Q Consensus 193 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~----------------------------------------------- 225 (330)
+|+|+ +++++. .|.+||..+++........
T Consensus 156 s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 232 (349)
T 1jmx_B 156 ADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLL 232 (349)
T ss_dssp CTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEE
T ss_pred CCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccc
Confidence 99999 555543 4999999877432211100
Q ss_pred ---------------------ccceEEEEEcC-CCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecC
Q psy6213 226 ---------------------IASVSRIKWRP-QRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGD 283 (330)
Q Consensus 226 ---------------------~~~v~~~~~~~-~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 283 (330)
...+..++|+| ++++++++ ++.|.+||+.+++. ...+.. ...+.+++|+|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-----~~~v~~~d~~~~~~-~~~~~~-~~~~~~~~~s~d 305 (349)
T 1jmx_B 233 YGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-----LNRLAKYDLKQRKL-IKAANL-DHTYYCVAFDKK 305 (349)
T ss_dssp EEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-----ESEEEEEETTTTEE-EEEEEC-SSCCCEEEECSS
T ss_pred eeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-----cCeEEEEECccCeE-EEEEcC-CCCccceEECCC
Confidence 01345677889 99975554 57999999998764 444443 345789999999
Q ss_pred CCEEEEeecCCeEeeeecc
Q psy6213 284 PQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 284 ~~~l~s~~~dg~i~iw~~~ 302 (330)
+++|++++.++.|.+|+..
T Consensus 306 g~~l~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 306 GDKLYLGGTFNDLAVFNPD 324 (349)
T ss_dssp SSCEEEESBSSEEEEEETT
T ss_pred CCEEEEecCCCeEEEEecc
Confidence 9999999999999999864
No 161
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.91 E-value=1.8e-21 Score=162.58 Aligned_cols=266 Identities=8% Similarity=0.019 Sum_probs=175.0
Q ss_pred CeEEEEEcC--CcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECC-CCCCCceeEEecc-cccc
Q psy6213 24 NVFKIFLIK--DTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLG-QISRSKQERVFND-HKRT 99 (330)
Q Consensus 24 ~~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~-~~~~~~~~~~~~~-~~~~ 99 (330)
+.|.+|+++ ++++.......... ...+..++|+| ++++|++++.+ .|.+|++. + ++....... ..+.
T Consensus 14 ~~i~~~~~d~~~g~l~~~~~~~~~~----~~~~~~~a~sp-dg~~l~~~~~~-~v~~~~~~~~---g~~~~~~~~~~~g~ 84 (365)
T 1jof_A 14 GAIFTVQFDDEKLTCKLIKRTEIPQ----DEPISWMTFDH-ERKNIYGAAMK-KWSSFAVKSP---TEIVHEASHPIGGH 84 (365)
T ss_dssp CEEEEEEEETTTTEEEEEEEEECCT----TCCCSEEEECT-TSSEEEEEEBT-EEEEEEEEET---TEEEEEEEEECCSS
T ss_pred CcEEEEEEECCCCCEEEeeEEccCC----CCCCcEEEECC-CCCEEEEEccc-eEEEEEECCC---CCEEEeeEeecCCC
Confidence 578887764 45443221111010 11247899999 99999988887 89999986 4 333322211 1123
Q ss_pred eeEEEEEecCCCE--EEEEe-------------cCCcEEEEEee-cCceeeeee----cCCCCeEEEEEcCCCCcEEEEE
Q psy6213 100 VNKVSFHYVESNW--LISGS-------------QDGTMRLFDIR-CQESTKIFH----SNTESVRDVEFNPHSPYAFASV 159 (330)
Q Consensus 100 i~~i~~~~~~~~~--l~~~~-------------~d~~i~i~d~~-~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~ 159 (330)
...++|+| ++++ ++++. .++.+.+|++. +++....+. .+...+.+++|+|+|++++++.
T Consensus 85 ~~~~~~sp-dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~ 163 (365)
T 1jof_A 85 PRANDADT-NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSAD 163 (365)
T ss_dssp GGGGCTTS-CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred CccEEECC-CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEc
Confidence 56688998 7774 44553 68999999997 455443333 2456789999999999644443
Q ss_pred ecCCcEEEEecC-CCcc-ceeeec--cCCCCeEEEEEcCCCCEEEEEec-CCcEEEEeCC--CCcccc-----ceecc--
Q psy6213 160 SENGTIQQWDVR-RPEK-CFYQFT--AHSGPIFACDWHPEHAWLATASR-DKTIKVWDLS--IKPSLE-----YSINT-- 225 (330)
Q Consensus 160 ~~dg~i~i~d~~-~~~~-~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~--~~~~~~-----~~~~~-- 225 (330)
..++.|++||+. ++.. .+..+. .+...+..++|+|+|+++++++. ++.+.+|++. +++... .....
T Consensus 164 ~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~ 243 (365)
T 1jof_A 164 LTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGI 243 (365)
T ss_dssp TTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTC
T ss_pred CCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCc
Confidence 346899999998 4321 122232 23567899999999999888775 6899999875 332210 11111
Q ss_pred ---cc------ceEEEE-EcCCCCeEEEEeecccCC-----eEEEEEcc-CCCccce---EeecCCCCeEEEEEec---C
Q psy6213 226 ---IA------SVSRIK-WRPQRKFHLASCSLVVDS-----SVNVWDIR-RPYIPLA---SFTEHKDVVSGLAWRG---D 283 (330)
Q Consensus 226 ---~~------~v~~~~-~~~~~~~l~~~~~~~~~~-----~i~i~d~~-~~~~~~~---~~~~~~~~v~~~~~~~---~ 283 (330)
.. .+..++ |+|||++++++.. .++ .|.+|++. +++. .. ....+...+..++|+| |
T Consensus 244 ~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~--~~~~~~~~~i~v~~~~~~g~~-~~~~~~~~~~~~~~~~~a~sp~~~d 320 (365)
T 1jof_A 244 PDRDPETGKGLYRADVCALTFSGKYMFASSR--ANKFELQGYIAGFKLRDCGSI-EKQLFLSPTPTSGGHSNAVSPCPWS 320 (365)
T ss_dssp CCBCTTTSSBSEEEEEEEECTTSSEEEEEEE--ESSTTSCCEEEEEEECTTSCE-EEEEEEEECSSCCTTCCCEEECTTC
T ss_pred CCcccccccccccccEEEECCCCCEEEEECC--CCCCCCCCeEEEEEECCCCCE-EEeeeeeecCCCCcccceecCCCcC
Confidence 11 588999 9999998766654 233 89999996 4442 22 1333455677899999 8
Q ss_pred CCEEEEeecC-CeEeeeecc
Q psy6213 284 PQLFIASSRV-SIIPRAKNI 302 (330)
Q Consensus 284 ~~~l~s~~~d-g~i~iw~~~ 302 (330)
|++|++++.+ +.|.+|+..
T Consensus 321 g~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 321 DEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp TTEEEEECSSSCEEEEEEEE
T ss_pred CCEEEEEEcCCCeEEEEEEc
Confidence 9999998875 899999764
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.90 E-value=2.6e-22 Score=182.45 Aligned_cols=278 Identities=9% Similarity=0.035 Sum_probs=186.4
Q ss_pred cceEEEEeeCCCeeecC-C----------CeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCC
Q psy6213 6 PVHKHGLKADNGLAQPS-R----------NVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNG 74 (330)
Q Consensus 6 ~v~~~~~s~~~~~~~~g-d----------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 74 (330)
.+.+++|||||++++.+ + +.|++||+++++......+. ..+..++||| +++.|+.+. ++
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~--------~~~~~~~~SP-DG~~la~~~-~~ 130 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP--------RPIQYLCWSP-VGSKLAYVY-QN 130 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC--------SSBCCEEECS-STTCEEEEE-TT
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC--------cccccceECC-CCCEEEEEE-CC
Confidence 38899999999995554 3 89999999988762111111 2358899999 999999886 78
Q ss_pred cEEEEECCCCCCCceeEEe-cccccce-----------------eEEEEEecCCCEEEEEecCC----------------
Q psy6213 75 AVVVWNLGQISRSKQERVF-NDHKRTV-----------------NKVSFHYVESNWLISGSQDG---------------- 120 (330)
Q Consensus 75 ~i~iw~~~~~~~~~~~~~~-~~~~~~i-----------------~~i~~~~~~~~~l~~~~~d~---------------- 120 (330)
.|++|++.+ ++..... .++...+ .+++|+| +++.|++++.|.
T Consensus 131 ~i~~~~~~~---g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~ 206 (719)
T 1z68_A 131 NIYLKQRPG---DPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQY 206 (719)
T ss_dssp EEEEESSTT---SCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEECTTSCEEEEEECCSSSS
T ss_pred eEEEEeCCC---CCcEEEecCCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEECCCCCceEEeeccCCCCC
Confidence 999999977 3322221 2222212 5899999 899999887652
Q ss_pred ------------------cEEEEEeecCcee--------eeeecCCCCeEEEEEcCCCCcEEEEEecCC----cEEEEe-
Q psy6213 121 ------------------TMRLFDIRCQEST--------KIFHSNTESVRDVEFNPHSPYAFASVSENG----TIQQWD- 169 (330)
Q Consensus 121 ------------------~i~i~d~~~~~~~--------~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg----~i~i~d- 169 (330)
.|++||+.+++.. ..+..+...+..++|+|+++ ++++....+ .|.+||
T Consensus 207 ~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~-~~~~~~~~~~~~~~l~~~d~ 285 (719)
T 1z68_A 207 PRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER-VCLQWLKRVQNVSVLSICDF 285 (719)
T ss_dssp CEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE-EEEEEEESSTTEEEEEEEEE
T ss_pred ccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe-EEEEEeccccCeEEEEEEcc
Confidence 7889999877643 12334677899999999976 566644332 488899
Q ss_pred ---cCCCccceeee----ccCCCCeE-----EEEEcCCCCEEEE--EecCC--cEEEEeCCCCccccceeccccceEEEE
Q psy6213 170 ---VRRPEKCFYQF----TAHSGPIF-----ACDWHPEHAWLAT--ASRDK--TIKVWDLSIKPSLEYSINTIASVSRIK 233 (330)
Q Consensus 170 ---~~~~~~~~~~~----~~~~~~i~-----~~~~~~~~~~l~~--~~~dg--~i~i~d~~~~~~~~~~~~~~~~v~~~~ 233 (330)
+.+ ++....+ ..|...+. .+.|+|+|+.++. ...+| .|.+||+.+++ ..........+..+.
T Consensus 286 ~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~ 363 (719)
T 1z68_A 286 REDWQT-WDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIF 363 (719)
T ss_dssp CSSSSS-EECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEE
T ss_pred cCCCCC-CceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEE
Confidence 765 4444444 35666676 8899999996554 44555 47777877664 333333445577777
Q ss_pred EcCCCCeEEEEeec--ccCCeEEEEEccC--CCccceEee----cCCCCeEEEEEecCCCEEEEe-ecC--CeEeeeec
Q psy6213 234 WRPQRKFHLASCSL--VVDSSVNVWDIRR--PYIPLASFT----EHKDVVSGLAWRGDPQLFIAS-SRV--SIIPRAKN 301 (330)
Q Consensus 234 ~~~~~~~l~~~~~~--~~~~~i~i~d~~~--~~~~~~~~~----~~~~~v~~~~~~~~~~~l~s~-~~d--g~i~iw~~ 301 (330)
++ +++.+++++.. ..++..++|.+.. +......+. +|...+..+.|+||+++++.. +.+ ..+.+|+.
T Consensus 364 ~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~ 441 (719)
T 1z68_A 364 RV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDG 441 (719)
T ss_dssp EE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECS
T ss_pred EE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEEC
Confidence 77 88887777761 0147888888764 321122332 255678899999998877753 333 35667754
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.90 E-value=1.4e-21 Score=177.77 Aligned_cols=284 Identities=10% Similarity=0.005 Sum_probs=186.5
Q ss_pred cccceEEEEeeCCCeeecCCCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCC---------C
Q psy6213 4 LSPVHKHGLKADNGLAQPSRNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATN---------G 74 (330)
Q Consensus 4 ~~~v~~~~~s~~~~~~~~gd~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---------g 74 (330)
.....+++|+|||++++++|+.|++||+.+++....+..+..... ......++||| ++++|+.++.+ +
T Consensus 16 ~~~~~~~~w~~dg~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Sp-dg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEF--GHSINDYSISP-DGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCCCEEECSSSEEEEEETTEEEEEETTTCCEEEEECTTTTTTC--CSCCCEEEECT-TSSEEEEEEEEEECSSSCEEE
T ss_pred cccccccEECCCCcEEEEcCCcEEEEECCCCceEEEEechhhhhh--cccccceEECC-CCCEEEEEECCeeeEEEccce
Confidence 445778999999998766699999999999887655544432211 11124589999 99999998875 5
Q ss_pred cEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeee-cCCCCe----------
Q psy6213 75 AVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFH-SNTESV---------- 143 (330)
Q Consensus 75 ~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v---------- 143 (330)
.+.+||+.+ ++. ..+..+...+...+|+| +++.|+.+. ++.|++||+.+++..+... ++...+
T Consensus 93 ~~~~~d~~~---~~~-~~l~~~~~~~~~~~~SP-dG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ 166 (740)
T 4a5s_A 93 SYDIYDLNK---RQL-ITEERIPNNTQWVTWSP-VGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYE 166 (740)
T ss_dssp EEEEEETTT---TEE-CCSSCCCTTEEEEEECS-STTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHH
T ss_pred EEEEEECCC---CcE-EEcccCCCcceeeEECC-CCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCccccccc
Confidence 677999987 333 34566778899999999 888888875 6899999998876544222 222222
Q ss_pred -------EEEEEcCCCCcEEEEEe-cCC-----------------------------------cEEEEecCC---Ccc-c
Q psy6213 144 -------RDVEFNPHSPYAFASVS-ENG-----------------------------------TIQQWDVRR---PEK-C 176 (330)
Q Consensus 144 -------~~~~~~~~~~~~~~~~~-~dg-----------------------------------~i~i~d~~~---~~~-~ 176 (330)
..+.|+|||++ |+.++ +++ .|++||+.+ +.. .
T Consensus 167 ee~~~~~~~~~wSpDg~~-la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~ 245 (740)
T 4a5s_A 167 EEVFSAYSALWWSPNGTF-LAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNAT 245 (740)
T ss_dssp HHTSSSSBCEEECTTSSE-EEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCC
T ss_pred chhcCCCcceEECCCCCE-EEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcce
Confidence 35899999996 55543 222 477888876 421 1
Q ss_pred eeeec------cCCCCeEEEEEcCCCCEEEEEecC----CcEEEEeCCCCc----c--ccce--eccccce-----EEEE
Q psy6213 177 FYQFT------AHSGPIFACDWHPEHAWLATASRD----KTIKVWDLSIKP----S--LEYS--INTIASV-----SRIK 233 (330)
Q Consensus 177 ~~~~~------~~~~~i~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~----~--~~~~--~~~~~~v-----~~~~ 233 (330)
...+. +|...+..++|+|||+.++..... ..|.+||+.+++ + .... ..+...+ ....
T Consensus 246 ~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~ 325 (740)
T 4a5s_A 246 SIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPH 325 (740)
T ss_dssp EEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCE
T ss_pred EEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCce
Confidence 22232 267779999999999977665432 369999998875 1 1111 2233333 3688
Q ss_pred EcCCCCeEE-EEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecC-----CeEeeee
Q psy6213 234 WRPQRKFHL-ASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRV-----SIIPRAK 300 (330)
Q Consensus 234 ~~~~~~~l~-~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-----g~i~iw~ 300 (330)
|+|||+.++ ..........|++||+.++. ...+......+..+.. +|++.|+..+.. +...+|.
T Consensus 326 fspDG~~l~~~~s~~~G~~~l~~~~~~~~~--~~~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~ 395 (740)
T 4a5s_A 326 FTLDGNSFYKIISNEEGYRHICYFQIDKKD--CTFITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYK 395 (740)
T ss_dssp ECTTSSEEEEEEECTTSCEEEEEEETTCSS--CEESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEE
T ss_pred EcCCCCEEEEEEEcCCCceEEEEEECCCCc--eEecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEE
Confidence 999999866 44331123578888887665 3344444555666542 446655554433 3455554
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.90 E-value=6.6e-21 Score=159.16 Aligned_cols=245 Identities=11% Similarity=0.104 Sum_probs=164.2
Q ss_pred ccceEEEEeeCCCeeecC-CCeEEEEEcC-CcceeeeeceeeccccccccceeeeeecccCCcE--EEEEc---------
Q psy6213 5 SPVHKHGLKADNGLAQPS-RNVFKIFLIK-DTEFVETHNLRVGKNINLNFSCNDVAWSCIEENH--IATGA--------- 71 (330)
Q Consensus 5 ~~v~~~~~s~~~~~~~~g-d~~i~iw~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--l~~~~--------- 71 (330)
..+..++|+|||+++.++ .+.|.+|+++ +++........... .+..++|+| ++++ ++++.
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~~~g------~~~~~~~sp-dg~~l~~~~~~~~~~~~~~~ 112 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGG------HPRANDADT-NTRAIFLLAAKQPPYAVYAN 112 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCS------SGGGGCTTS-CCEEEEEEECSSTTCCEEEE
T ss_pred CCCcEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEeecCC------CCccEEECC-CCCEEEEEEecCCcceeccc
Confidence 467899999999985444 3399999997 66654332211111 135689999 8884 45553
Q ss_pred ----CCCcEEEEECCCCCCCceeEEec----ccccceeEEEEEecCCCEEEEEec-CCcEEEEEee-cCcee--eeee--
Q psy6213 72 ----TNGAVVVWNLGQISRSKQERVFN----DHKRTVNKVSFHYVESNWLISGSQ-DGTMRLFDIR-CQEST--KIFH-- 137 (330)
Q Consensus 72 ----~dg~i~iw~~~~~~~~~~~~~~~----~~~~~i~~i~~~~~~~~~l~~~~~-d~~i~i~d~~-~~~~~--~~~~-- 137 (330)
.+|.+.+|++... ++....+. .+...+.+++|+| ++++++++.. ++.|++||+. +++.. ..+.
T Consensus 113 ~~~~~~g~v~v~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~sp-dG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~ 189 (365)
T 1jof_A 113 PFYKFAGYGNVFSVSET--GKLEKNVQNYEYQENTGIHGMVFDP-TETYLYSADLTANKLWTHRKLASGEVELVGSVDAP 189 (365)
T ss_dssp EESSSCCEEEEEEECTT--CCEEEEEEEEECCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECS
T ss_pred eeecCCceEEEEccCCC--CcCcceEeeEEeCCCCcceEEEECC-CCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecC
Confidence 6899999999742 22222222 2456789999999 8887777653 6799999998 66643 2333
Q ss_pred cCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCC-ccce------eeecc----CCC------CeEEEE-EcCCCCEE
Q psy6213 138 SNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRP-EKCF------YQFTA----HSG------PIFACD-WHPEHAWL 199 (330)
Q Consensus 138 ~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~-~~~~------~~~~~----~~~------~i~~~~-~~~~~~~l 199 (330)
.+...+..++|+|++++++++...++.|.+|++... ++.. ..+.. |.. .+..++ |+|+|++|
T Consensus 190 ~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l 269 (365)
T 1jof_A 190 DPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYM 269 (365)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEE
T ss_pred CCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEE
Confidence 235678999999999964444445789999987531 2221 11211 122 478999 99999988
Q ss_pred EEEecCC------cEEEEeCC-CCccccc--ee-ccccceEEEEEcC---CCCeEEEEeecccCCeEEEEEccCC
Q psy6213 200 ATASRDK------TIKVWDLS-IKPSLEY--SI-NTIASVSRIKWRP---QRKFHLASCSLVVDSSVNVWDIRRP 261 (330)
Q Consensus 200 ~~~~~dg------~i~i~d~~-~~~~~~~--~~-~~~~~v~~~~~~~---~~~~l~~~~~~~~~~~i~i~d~~~~ 261 (330)
+++..+. .|.+|++. +++.... .. .....+..++|+| +|++++++.. .++.|.+|++...
T Consensus 270 ~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~--~~~~v~v~~~~~~ 342 (365)
T 1jof_A 270 FASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDD--QEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECS--SSCEEEEEEEETT
T ss_pred EEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEc--CCCeEEEEEEchh
Confidence 8776433 89999996 4432211 12 2334567789999 8998766665 4699999999765
No 165
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.89 E-value=4.6e-22 Score=167.95 Aligned_cols=274 Identities=9% Similarity=0.041 Sum_probs=176.5
Q ss_pred cceEEEEeeCCCeeecC-----CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEE
Q psy6213 6 PVHKHGLKADNGLAQPS-----RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWN 80 (330)
Q Consensus 6 ~v~~~~~s~~~~~~~~g-----d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~ 80 (330)
.+..++|+|||++++.. +..|.+|++.+++........ .. ....+.|+| +++.|+.++.++.|.+|+
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~-~~------~~~~~~~sp-dg~~l~~~~~~~~l~~~d 108 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGK-GD------NTFGGFIST-DERAFFYVKNELNLMKVD 108 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSS-CB------CTTTCEECT-TSSEEEEEETTTEEEEEE
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCC-CC------ccccceECC-CCCEEEEEEcCCcEEEEE
Confidence 37888999999994333 347888899887654332211 11 113478999 999999999888999999
Q ss_pred CCCCCCCceeEEecccccceeE-------------------EEEEecCCCEEEEE-----ecCCcEEEEEeecCceeeee
Q psy6213 81 LGQISRSKQERVFNDHKRTVNK-------------------VSFHYVESNWLISG-----SQDGTMRLFDIRCQESTKIF 136 (330)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~i~~-------------------i~~~~~~~~~l~~~-----~~d~~i~i~d~~~~~~~~~~ 136 (330)
+.+ .+.......+...... ..|+| +++.++.+ ..+..|++||+.+++.....
T Consensus 109 ~~~---~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~sp-dg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~ 184 (396)
T 3c5m_A 109 LET---LEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQP-LTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH 184 (396)
T ss_dssp TTT---CCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCC-CCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE
T ss_pred CCC---CCcEEEEecccccCCCCCEEEeccCCccccccccccccCC-CCcceeeeeeccCCCcceEEEEECCCCcEEeec
Confidence 987 3433333323321111 23455 45544433 34568999999887765544
Q ss_pred ecCCCCeEEEEEcC-CCCcEEEEEecC------CcEEEEecCCCccceeeeccC--CCCeEEEEEcCCCCEEEEEecC--
Q psy6213 137 HSNTESVRDVEFNP-HSPYAFASVSEN------GTIQQWDVRRPEKCFYQFTAH--SGPIFACDWHPEHAWLATASRD-- 205 (330)
Q Consensus 137 ~~~~~~v~~~~~~~-~~~~~~~~~~~d------g~i~i~d~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~d-- 205 (330)
.+...+..+.|+| ++.. ++..+.+ ..|.+||+.. .. ...+..+ ...+..+.|+|+|++|+.++.+
T Consensus 185 -~~~~~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~-~~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 260 (396)
T 3c5m_A 185 -QDTAWLGHPIYRPFDDST-VGFCHEGPHDLVDARMWLVNEDG-SN-VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKG 260 (396)
T ss_dssp -EESSCEEEEEEETTEEEE-EEEEECSCSSSCSCCCEEEETTS-CC-CEESSCCCTTEEEEEEEECTTSSCEEEEEEETT
T ss_pred -cCCcccccceECCCCCCE-EEEEecCCCCCCCceEEEEECCC-Cc-eeEeeccCCCccccceEECCCCCEEEEEecCCC
Confidence 3566789999999 7774 4444333 3688888865 32 2223222 2357889999999987777644
Q ss_pred ---CcEEEEeCCCCccccceeccccceEEEEEcC-CCCeEEEEee-------------cccCCeEEEEEccCCCccceEe
Q psy6213 206 ---KTIKVWDLSIKPSLEYSINTIASVSRIKWRP-QRKFHLASCS-------------LVVDSSVNVWDIRRPYIPLASF 268 (330)
Q Consensus 206 ---g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~-------------~~~~~~i~i~d~~~~~~~~~~~ 268 (330)
+.|++||+.+++..... ... ... +.|+| +|+.++.+.+ ...+..|++||+.++.. ..+
T Consensus 261 ~~~~~l~~~d~~~g~~~~l~-~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~l 335 (396)
T 3c5m_A 261 QTDRVIYKANPETLENEEVM-VMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA--QKL 335 (396)
T ss_dssp TCCEEEEEECTTTCCEEEEE-ECC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC--CEE
T ss_pred CccceEEEEECCCCCeEEee-eCC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce--EEc
Confidence 44999999877432221 111 233 89999 9997555331 00247899999987753 344
Q ss_pred ecCCC-----------CeEEEEEecCCCEEEEeec-CCeEeeee
Q psy6213 269 TEHKD-----------VVSGLAWRGDPQLFIASSR-VSIIPRAK 300 (330)
Q Consensus 269 ~~~~~-----------~v~~~~~~~~~~~l~s~~~-dg~i~iw~ 300 (330)
..+.. .+..++|+|||+.|+.++. ++...+|.
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~ 379 (396)
T 3c5m_A 336 CKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYI 379 (396)
T ss_dssp EECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred cCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEE
Confidence 44443 2567899999998887765 56666664
No 166
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.88 E-value=3.1e-20 Score=169.02 Aligned_cols=237 Identities=14% Similarity=0.131 Sum_probs=164.7
Q ss_pred eeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccc-----eeEEEEEecCCCEEEEEecC---------
Q psy6213 54 CNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRT-----VNKVSFHYVESNWLISGSQD--------- 119 (330)
Q Consensus 54 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~-----i~~i~~~~~~~~~l~~~~~d--------- 119 (330)
...++|+| ++.+++++ ||.|++||+.+ ++....+..|... ...+.|+| ++++|+.++.+
T Consensus 19 ~~~~~w~~-dg~~~~~~--~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~Sp-dg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 19 LYSLRWIS-DHEYLYKQ--ENNILVFNAEY---GNSSVFLENSTFDEFGHSINDYSISP-DGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CCCEEECS-SSEEEEEE--TTEEEEEETTT---CCEEEEECTTTTTTCCSCCCEEEECT-TSSEEEEEEEEEECSSSCEE
T ss_pred ccccEECC-CCcEEEEc--CCcEEEEECCC---CceEEEEechhhhhhcccccceEECC-CCCEEEEEECCeeeEEEccc
Confidence 36899999 88888886 89999999988 5555566666532 24478999 89999988876
Q ss_pred CcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCe------------
Q psy6213 120 GTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPI------------ 187 (330)
Q Consensus 120 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i------------ 187 (330)
+.+.+||+.+++... +..+...+...+|||+|+. |+.+ .++.|++||+.++.....+..++...+
T Consensus 92 ~~~~~~d~~~~~~~~-l~~~~~~~~~~~~SPdG~~-la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee 168 (740)
T 4a5s_A 92 ASYDIYDLNKRQLIT-EERIPNNTQWVTWSPVGHK-LAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEE 168 (740)
T ss_dssp EEEEEEETTTTEECC-SSCCCTTEEEEEECSSTTC-EEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHH
T ss_pred eEEEEEECCCCcEEE-cccCCCcceeeEECCCCCE-EEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccch
Confidence 567799999887554 5556778999999999996 5655 468999999987433222222332222
Q ss_pred -----EEEEEcCCCCEEEEEecCC------------------------------------cEEEEeCCC---Cc---ccc
Q psy6213 188 -----FACDWHPEHAWLATASRDK------------------------------------TIKVWDLSI---KP---SLE 220 (330)
Q Consensus 188 -----~~~~~~~~~~~l~~~~~dg------------------------------------~i~i~d~~~---~~---~~~ 220 (330)
..+.|||||+.|+..+.|. .|++||+.+ ++ ...
T Consensus 169 ~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~ 248 (740)
T 4a5s_A 169 VFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQ 248 (740)
T ss_dssp TSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEE
T ss_pred hcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEE
Confidence 3589999999999876332 478899887 62 211
Q ss_pred cee-----ccccceEEEEEcCCCCeEEEEeec-ccCCeEEEEEccCCC----cc-ceEe--ecCCCCeE-----EEEEec
Q psy6213 221 YSI-----NTIASVSRIKWRPQRKFHLASCSL-VVDSSVNVWDIRRPY----IP-LASF--TEHKDVVS-----GLAWRG 282 (330)
Q Consensus 221 ~~~-----~~~~~v~~~~~~~~~~~l~~~~~~-~~~~~i~i~d~~~~~----~~-~~~~--~~~~~~v~-----~~~~~~ 282 (330)
... .+...+..++|+|||+.++..... ..+..|.+||+.+++ +. ...+ ..|...|. ..+|+|
T Consensus 249 l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fsp 328 (740)
T 4a5s_A 249 ITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTL 328 (740)
T ss_dssp ECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECT
T ss_pred ecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcC
Confidence 111 256679999999999965544431 023479999999876 11 1222 45555554 789999
Q ss_pred CCCEEE-Eee-cCC--eEeeee
Q psy6213 283 DPQLFI-ASS-RVS--IIPRAK 300 (330)
Q Consensus 283 ~~~~l~-s~~-~dg--~i~iw~ 300 (330)
||+.|+ ..+ .+| .|++|+
T Consensus 329 DG~~l~~~~s~~~G~~~l~~~~ 350 (740)
T 4a5s_A 329 DGNSFYKIISNEEGYRHICYFQ 350 (740)
T ss_dssp TSSEEEEEEECTTSCEEEEEEE
T ss_pred CCCEEEEEEEcCCCceEEEEEE
Confidence 999877 555 445 455554
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.87 E-value=8.9e-20 Score=164.25 Aligned_cols=288 Identities=7% Similarity=-0.028 Sum_probs=182.9
Q ss_pred CCcccceEEEEeeCCCe-eec--C-CCeEEEEEcCCcceeeeeceeecccc--ccccceeeeeec--ccCCcE-EEEEcC
Q psy6213 2 AYLSPVHKHGLKADNGL-AQP--S-RNVFKIFLIKDTEFVETHNLRVGKNI--NLNFSCNDVAWS--CIEENH-IATGAT 72 (330)
Q Consensus 2 ~H~~~v~~~~~s~~~~~-~~~--g-d~~i~iw~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~--~~~~~~-l~~~~~ 72 (330)
.|...+..++|++++.+ +.. + ++...||....+.....+..+...+. ...+.-....|+ | +++. |+.++.
T Consensus 21 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SP-Dg~~~la~~~~ 99 (662)
T 3azo_A 21 SRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRP-AGGPLLVFTHF 99 (662)
T ss_dssp HTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCS-SSSCEEEEEBT
T ss_pred hcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeec-CCCeEEEEEEC
Confidence 37788999999988766 444 4 78999999654443333332221111 001111145565 8 7877 666543
Q ss_pred -CCcEEEEECCCCCCCceeEEecc-----cccceeEEEEEecCCCEEEEEecC----------CcEEEEEeec------C
Q psy6213 73 -NGAVVVWNLGQISRSKQERVFND-----HKRTVNKVSFHYVESNWLISGSQD----------GTMRLFDIRC------Q 130 (330)
Q Consensus 73 -dg~i~iw~~~~~~~~~~~~~~~~-----~~~~i~~i~~~~~~~~~l~~~~~d----------~~i~i~d~~~------~ 130 (330)
+..|.++++.... ......+.. |...+..++|+| +++.|++++.+ ..|++||+.+ +
T Consensus 100 ~~~~l~~~~~~~~g-~~~~~~l~~~~~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 177 (662)
T 3azo_A 100 GDQRLYAFEPDAPG-GAVPRPLTPVSAVGGGLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRS 177 (662)
T ss_dssp TTCCEEEECTTSTT-CCCCEECSCCCCSTTCEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGG
T ss_pred CCCeEEEEcCCCCC-CCCCEeccCCccCCCCccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCC
Confidence 5566666654000 022333444 567889999999 88989888876 5899999987 4
Q ss_pred ceeeeee-cCCCCeEEEEEcCCCCcEEEEEecC--------CcEEEEecCCCc---cceeeeccCCCCeEEEEEcCCCCE
Q psy6213 131 ESTKIFH-SNTESVRDVEFNPHSPYAFASVSEN--------GTIQQWDVRRPE---KCFYQFTAHSGPIFACDWHPEHAW 198 (330)
Q Consensus 131 ~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~d--------g~i~i~d~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~ 198 (330)
+. ..+. .+...+..++|+|+|++ |+.++.+ ..|++||+...+ ........+...+..+.|+|||++
T Consensus 178 ~~-~~l~~~~~~~~~~~~~SpDG~~-la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l 255 (662)
T 3azo_A 178 AV-RELSDDAHRFVTGPRLSPDGRQ-AVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSL 255 (662)
T ss_dssp GS-EESSCSCSSEECCCEECTTSSE-EEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCE
T ss_pred ce-eEEEecCCCcccCceECCCCCE-EEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeE
Confidence 44 3444 45567888999999995 5555533 379999998323 333344445788999999999998
Q ss_pred EEEEecCC--cEEEEeCCCCccccceeccccc--------eEEEEEcCCCCeEEEEeecccCCeEEEE--EccCCCccce
Q psy6213 199 LATASRDK--TIKVWDLSIKPSLEYSINTIAS--------VSRIKWRPQRKFHLASCSLVVDSSVNVW--DIRRPYIPLA 266 (330)
Q Consensus 199 l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~--------v~~~~~~~~~~~l~~~~~~~~~~~i~i~--d~~~~~~~~~ 266 (330)
++++..++ .|.+||+.+++.......+... +..++|+|+++. ++++. . +.+++| |+.++. +.
T Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~-~~~~~--~-~~~~l~~~d~~~~~--~~ 329 (662)
T 3azo_A 256 IVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLI-AVVHG--K-GAAVLGILDPESGE--LV 329 (662)
T ss_dssp EEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCE-EEEEB--S-SSCEEEEEETTTTE--EE
T ss_pred EEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEE-EEEEE--c-CccEEEEEECCCCc--EE
Confidence 88888888 5666776555322211111111 467889999885 66666 5 888888 544443 56
Q ss_pred EeecCCCCeEEE-EEecCCCEEEEeecCCeEeeee
Q psy6213 267 SFTEHKDVVSGL-AWRGDPQLFIASSRVSIIPRAK 300 (330)
Q Consensus 267 ~~~~~~~~v~~~-~~~~~~~~l~s~~~dg~i~iw~ 300 (330)
.+..|...+..+ +++++.-.+++++.+....+|.
T Consensus 330 ~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 330 DAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVE 364 (662)
T ss_dssp ECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEE
T ss_pred EecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEE
Confidence 677777778777 5544444445556665555553
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.86 E-value=1.8e-18 Score=139.46 Aligned_cols=234 Identities=9% Similarity=0.120 Sum_probs=168.5
Q ss_pred eeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEec------ccccceeEEEEEecCCCEEEEEec-CCcEEEEE
Q psy6213 54 CNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFN------DHKRTVNKVSFHYVESNWLISGSQ-DGTMRLFD 126 (330)
Q Consensus 54 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~------~~~~~i~~i~~~~~~~~~l~~~~~-d~~i~i~d 126 (330)
+.+++++| +++++++...++.|.+||... +....+. .+...+..+++.+.+++++++... ++.|++||
T Consensus 32 p~~v~~~~-~g~l~v~~~~~~~i~~~d~~g----~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d 106 (286)
T 1q7f_A 32 PSGVAVNA-QNDIIVADTNNHRIQIFDKEG----RFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN 106 (286)
T ss_dssp EEEEEECT-TCCEEEEEGGGTEEEEECTTS----CEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC
T ss_pred CceEEECC-CCCEEEEECCCCEEEEECCCC----cEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC
Confidence 58899999 888888888899999999764 3333332 234568899996336666666543 78999999
Q ss_pred eecCceeeeeec-CCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeec--cCCCCeEEEEEcCCCCEEEEEe
Q psy6213 127 IRCQESTKIFHS-NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFT--AHSGPIFACDWHPEHAWLATAS 203 (330)
Q Consensus 127 ~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~ 203 (330)
.+++.+..+.. +...+..++++|++. ++++...++.|++||... .....+. .+...+..++++|+|+++++..
T Consensus 107 -~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g--~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 107 -QYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNG--NVLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp -TTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTS--CEEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred -CCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCC--CEEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 55666666643 345689999999997 677777789999999653 3344443 3445789999999999888888
Q ss_pred cCCcEEEEeCCCCccccceecc--ccceEEEEEcCCCCeEEEEeecccCC-eEEEEEccCCCccceEeecCC--CCeEEE
Q psy6213 204 RDKTIKVWDLSIKPSLEYSINT--IASVSRIKWRPQRKFHLASCSLVVDS-SVNVWDIRRPYIPLASFTEHK--DVVSGL 278 (330)
Q Consensus 204 ~dg~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~~~~~-~i~i~d~~~~~~~~~~~~~~~--~~v~~~ 278 (330)
.++.|++||.... ........ ...+..++++|+|.. +++.. .++ .|.+||.. ++. +..+..+. ..+.++
T Consensus 183 ~~~~i~~~~~~g~-~~~~~~~~g~~~~p~~i~~d~~G~l-~v~~~--~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~~i 256 (286)
T 1q7f_A 183 RAHCVKVFNYEGQ-YLRQIGGEGITNYPIGVGINSNGEI-LIADN--HNNFNLTIFTQD-GQL-ISALESKVKHAQCFDV 256 (286)
T ss_dssp GGTEEEEEETTCC-EEEEESCTTTSCSEEEEEECTTCCE-EEEEC--SSSCEEEEECTT-SCE-EEEEEESSCCSCEEEE
T ss_pred CCCEEEEEcCCCC-EEEEEccCCccCCCcEEEECCCCCE-EEEeC--CCCEEEEEECCC-CCE-EEEEcccCCCCcceeE
Confidence 8899999997543 32222222 257889999999985 55544 365 99999964 333 44554443 347899
Q ss_pred EEecCCCEEEEeecCCeEeeeeccc
Q psy6213 279 AWRGDPQLFIASSRVSIIPRAKNIK 303 (330)
Q Consensus 279 ~~~~~~~~l~s~~~dg~i~iw~~~~ 303 (330)
+++|+|+++++ +.|+.|++|+...
T Consensus 257 ~~~~~g~l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 257 ALMDDGSVVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EEETTTEEEEE-ETTTEEEEEECSC
T ss_pred EECCCCcEEEE-CCCCeEEEEEccc
Confidence 99999987776 6799999997543
No 169
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.86 E-value=8.1e-19 Score=145.46 Aligned_cols=255 Identities=11% Similarity=0.078 Sum_probs=170.6
Q ss_pred ccceEEEEeeCCCeeec---------C--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCC
Q psy6213 5 SPVHKHGLKADNGLAQP---------S--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATN 73 (330)
Q Consensus 5 ~~v~~~~~s~~~~~~~~---------g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 73 (330)
..+...++ ||+.++. + ++.|.+|++++++.... ..+..++|+| +++.|+.++.+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l------------~~~~~~~~Sp-Dg~~la~~~~~ 79 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI------------ENATMPRISP-DGKKIAFMRAN 79 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE------------ESCEEEEECT-TSSEEEEEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc------------ccCCCeEECC-CCCEEEEEEec
Confidence 45677777 8887332 1 56799999988764322 1247899999 99988877654
Q ss_pred ---C--cEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecC---------------------------Cc
Q psy6213 74 ---G--AVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQD---------------------------GT 121 (330)
Q Consensus 74 ---g--~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d---------------------------~~ 121 (330)
+ .|.+|++.+ ++...... +.. +..+.|+| +++.|+.++.+ ..
T Consensus 80 ~~~~~~~l~~~~~~~---g~~~~l~~-~~~-~~~~~wsp-dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 153 (347)
T 2gop_A 80 EEKKVSEIWVADLET---LSSKKILE-AKN-IRSLEWNE-DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTT 153 (347)
T ss_dssp TTTTEEEEEEEETTT---TEEEEEEE-ESE-EEEEEECT-TSSEEEEEEECCCC---------CCCC---------CEEE
T ss_pred cCCCcceEEEEECCC---CceEEEEc-CCC-ccceeECC-CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccce
Confidence 3 377778776 44433333 333 99999999 78878777632 57
Q ss_pred EEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCC-------cEEEEecCCCccceeeeccCCCCeEEEEEcC
Q psy6213 122 MRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENG-------TIQQWDVRRPEKCFYQFTAHSGPIFACDWHP 194 (330)
Q Consensus 122 i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg-------~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~ 194 (330)
|++||+.+++.+..+.. . .+..++|+|++ +++++..++ ...+|.+.+ ++. ..+..+ ..+..+ +|
T Consensus 154 l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~-~~~-~~l~~~-~~~~~~--sp 224 (347)
T 2gop_A 154 FWIFDTESEEVIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWED-GKE-EKMFEK-VSFYAV--DS 224 (347)
T ss_dssp EEEEETTTTEEEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEET-TEE-EEEEEE-ESEEEE--EE
T ss_pred EEEEECCCCeEEeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeCC-Cce-EEeccC-cceeeE--CC
Confidence 99999988876455554 3 78899999999 566665442 334444443 333 333334 455544 99
Q ss_pred CCCEEEEEecC--------CcEEEEeCCCCccccceeccccceEE-EEEcCCCCeEEEEeecccCCeEEEEEccCCCccc
Q psy6213 195 EHAWLATASRD--------KTIKVWDLSIKPSLEYSINTIASVSR-IKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPL 265 (330)
Q Consensus 195 ~~~~l~~~~~d--------g~i~i~d~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~ 265 (330)
+|++|+.++.+ ..|.+|| +++.......+...+.. +.|+ ++ ++++++ .++.+++| +.+++ .
T Consensus 225 dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~--~~~~~~l~-~~~g~--~ 294 (347)
T 2gop_A 225 DGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK--VYFTLF--EEGSVNLY-IWDGE--I 294 (347)
T ss_dssp CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE--EEEEEE--ETTEEEEE-EESSS--E
T ss_pred CCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc--EEEEEe--cCCcEEEE-EcCCc--e
Confidence 99988887754 3688888 44333223334567776 8999 87 455555 58999999 88443 3
Q ss_pred eEeecCCCCeEEEEEecCCCEEEEeecCCeE-eeeec
Q psy6213 266 ASFTEHKDVVSGLAWRGDPQLFIASSRVSII-PRAKN 301 (330)
Q Consensus 266 ~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i-~iw~~ 301 (330)
..+..+...|.+++|+| .++++++.++.. .+|..
T Consensus 295 ~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 295 KPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTW 329 (347)
T ss_dssp EEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEE
T ss_pred EEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEe
Confidence 44445577899999999 677777777664 66653
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.86 E-value=3.9e-19 Score=146.22 Aligned_cols=242 Identities=12% Similarity=0.109 Sum_probs=174.6
Q ss_pred ccceEEEEeeCCCeeecC--C------------------------CeEEEEEcCCcceeeeeceeeccccccccceeeee
Q psy6213 5 SPVHKHGLKADNGLAQPS--R------------------------NVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVA 58 (330)
Q Consensus 5 ~~v~~~~~s~~~~~~~~g--d------------------------~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 58 (330)
+.+.+++++|+|++++++ + +.|.+||.++++....... .....+..++
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~------~~~~~p~gia 97 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGK------NLFYLPHGLS 97 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECT------TTCSSEEEEE
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCC------CccCCceEEE
Confidence 578999999999995555 5 3799999988887543321 1111248899
Q ss_pred ecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEe---------cccccceeEEEEEecCCCEEEEEe-cCCcEEEEEee
Q psy6213 59 WSCIEENHIATGATNGAVVVWNLGQISRSKQERVF---------NDHKRTVNKVSFHYVESNWLISGS-QDGTMRLFDIR 128 (330)
Q Consensus 59 ~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~---------~~~~~~i~~i~~~~~~~~~l~~~~-~d~~i~i~d~~ 128 (330)
++| +++++++...++.|++|+.... ...+..+ ..+-.....++++|.++.++++.+ .++.|++|| .
T Consensus 98 ~d~-~g~l~v~d~~~~~v~~~~~~g~--~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~ 173 (329)
T 3fvz_A 98 IDT-DGNYWVTDVALHQVFKLDPHSK--EGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-P 173 (329)
T ss_dssp ECT-TSCEEEEETTTTEEEEECTTCS--SCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-T
T ss_pred ECC-CCCEEEEECCCCEEEEEeCCCC--eEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-C
Confidence 999 8888888888999999998641 1133333 233446889999985677777776 689999999 4
Q ss_pred cCceeeeeecCC----------CCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeee--ccCCCCeEEEEEcCCC
Q psy6213 129 CQESTKIFHSNT----------ESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQF--TAHSGPIFACDWHPEH 196 (330)
Q Consensus 129 ~~~~~~~~~~~~----------~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~--~~~~~~i~~~~~~~~~ 196 (330)
+++.+..+.... .....++++|++..++++...++.|++||..+ ++.+..+ ..+...+..++++| +
T Consensus 174 ~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~p-g 251 (329)
T 3fvz_A 174 SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT-KEFVREIKHASFGRNVFAISYIP-G 251 (329)
T ss_dssp TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT-CCEEEEECCTTTTTCEEEEEEET-T
T ss_pred CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC-CcEEEEEeccccCCCcceeeecC-C
Confidence 566666654222 23889999999555788888899999999985 4555555 34556788999999 4
Q ss_pred CEEEEE-------ecCCcEEEEeCCCCccccce---eccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCC
Q psy6213 197 AWLATA-------SRDKTIKVWDLSIKPSLEYS---INTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRP 261 (330)
Q Consensus 197 ~~l~~~-------~~dg~i~i~d~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~ 261 (330)
..+.+. ..+..+++||..+++..... ..+...+..++++|+|. ++++.. .++.|++|++...
T Consensus 252 ~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~-lyvad~--~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 252 FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGT-VYIGDA--HTNTVWKFTLTEK 323 (329)
T ss_dssp EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSE-EEEEES--SSCCEEEEEEEEC
T ss_pred EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCC-EEEEEC--CCCEEEEEeCCcc
Confidence 333333 34458999999888554443 23456789999999995 566666 6999999998653
No 171
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.86 E-value=6.6e-19 Score=146.52 Aligned_cols=259 Identities=11% Similarity=0.076 Sum_probs=182.3
Q ss_pred CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcC----------CCcEEEEECCCCCCCceeEE
Q psy6213 23 RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGAT----------NGAVVVWNLGQISRSKQERV 92 (330)
Q Consensus 23 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----------dg~i~iw~~~~~~~~~~~~~ 92 (330)
|+.|.+||..+++....+... ... .++|+| ++++++++.. ++.|.+||..+ .+....
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g--------~~p-~i~~sp-dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t---~~~~~~ 96 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTA--------FNG-HVQVSN-DGKKIYTMTTYHERITRGKRSDVVEVWDADK---LTFEKE 96 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECC--------EEE-EEEECT-TSSEEEEEEEEETTSSSSCEEEEEEEEETTT---CCEEEE
T ss_pred cCeEEEEECCCCeEEEEecCC--------CCC-ceEECC-CCCEEEEEEecccccccCCCCCEEEEEECcC---CcEEEE
Confidence 679999999988876544322 112 789999 9999988863 56799999887 555555
Q ss_pred eccc------ccceeEEEEEecCCCEEEEEec--CCcEEEEEeecCceeee-eecCCCCeEEEEEcCCCCcEEEEEecCC
Q psy6213 93 FNDH------KRTVNKVSFHYVESNWLISGSQ--DGTMRLFDIRCQESTKI-FHSNTESVRDVEFNPHSPYAFASVSENG 163 (330)
Q Consensus 93 ~~~~------~~~i~~i~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~dg 163 (330)
+... ......++++| ++++|+++.. ++.|.+||+.+++.+.. +... ....+.+.|+++..+++.+.||
T Consensus 97 i~~~~~~~~~g~~p~~i~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~~~~~~~~~~dg 173 (361)
T 2oiz_A 97 ISLPPKRVQGLNYDGLFRQTT-DGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA--GCWSVIPQPNRPRSFMTICGDG 173 (361)
T ss_dssp EEECTTBCCBCCCGGGEEECT-TSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT--TEEEEEECTTSSSEEEEEETTS
T ss_pred EEcCccccccCCCcceEEECC-CCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC--CcceeEEcCCCCeeEEEECCCC
Confidence 4422 24567899998 8888888764 57999999999988777 5532 2233667888766788899999
Q ss_pred cEEEEecCCCccce------eeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccce-e---c----c----
Q psy6213 164 TIQQWDVRRPEKCF------YQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYS-I---N----T---- 225 (330)
Q Consensus 164 ~i~i~d~~~~~~~~------~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~---~----~---- 225 (330)
.+.+|+....++.. ..+.....++ .+.++|++..++..+.++.+.++|+......... . . .
T Consensus 174 ~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (361)
T 2oiz_A 174 GLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWV 252 (361)
T ss_dssp SEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCE
T ss_pred cEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccc
Confidence 99999987534333 1222222222 3445677877888888999999998755321110 0 0 0
Q ss_pred ccceEEEEEcCCCCeEEEEee-cc-------cCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEe
Q psy6213 226 IASVSRIKWRPQRKFHLASCS-LV-------VDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIP 297 (330)
Q Consensus 226 ~~~v~~~~~~~~~~~l~~~~~-~~-------~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 297 (330)
......++|+|+++.++++.. .. ..+.|.+||+.+.+. +..+..+. +.+++|+|||++|++++. +.|.
T Consensus 253 p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~-v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~ 328 (361)
T 2oiz_A 253 PGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR-VARIPGRD--ALSMTIDQQRNLMLTLDG-GNVN 328 (361)
T ss_dssp ECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE-EEEEECTT--CCEEEEETTTTEEEEECS-SCEE
T ss_pred cCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcE-EEEEecCC--eeEEEECCCCCEEEEeCC-CeEE
Confidence 111223789999888776643 00 135899999999876 77777766 999999999999998887 9999
Q ss_pred eeecc
Q psy6213 298 RAKNI 302 (330)
Q Consensus 298 iw~~~ 302 (330)
+|+..
T Consensus 329 v~D~~ 333 (361)
T 2oiz_A 329 VYDIS 333 (361)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 99754
No 172
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.86 E-value=2.4e-19 Score=150.94 Aligned_cols=263 Identities=9% Similarity=-0.013 Sum_probs=172.1
Q ss_pred EEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcC-CCc--EEEEECCCCCCCceeEEecccccceeEEEE
Q psy6213 29 FLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGAT-NGA--VVVWNLGQISRSKQERVFNDHKRTVNKVSF 105 (330)
Q Consensus 29 w~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~--i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~ 105 (330)
++..++.....+..+..... ...+...+|+| +++.|+.++. +|. |.+||+.+ .+.......+...+....|
T Consensus 15 ~~~~~g~~~~~lt~~~~~~~--~~~~~~~~~Sp-Dg~~l~~~~~~~g~~~l~~~d~~~---g~~~~lt~~~~~~~~~~~~ 88 (388)
T 3pe7_A 15 QDASTGAQVTRLTPPDVTCH--RNYFYQKCFTR-DGSKLLFGGAFDGPWNYYLLDLNT---QVATQLTEGRGDNTFGGFL 88 (388)
T ss_dssp ECTTTCCEEEECSCTTSCEE--CCCTTSCCBCT-TSCEEEEEECTTSSCEEEEEETTT---CEEEECCCSSCBCSSSCEE
T ss_pred ecCCCCcceEEecCCccccc--chhhcCccCCC-CCCEEEEEEcCCCCceEEEEeCCC---CceEEeeeCCCCCccceEE
Confidence 45566655554443322110 11123478999 9998888877 663 88888877 5555555566666667889
Q ss_pred EecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEE--EcCCCCcEEEEE----------------------ec
Q psy6213 106 HYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVE--FNPHSPYAFASV----------------------SE 161 (330)
Q Consensus 106 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~--~~~~~~~~~~~~----------------------~~ 161 (330)
+| +++.|+.++.++.|++||+.+++....+..+...+.... ++|++.. ++.. ..
T Consensus 89 sp-dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (388)
T 3pe7_A 89 SP-DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTK-LVGIEIRREDWVPLTDWKKFHEFYFTKP 166 (388)
T ss_dssp CT-TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSE-EEEEEEEGGGCCCCCSHHHHHHHGGGCC
T ss_pred cC-CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCe-eccccccCcccccccccchhhhhhccCC
Confidence 99 899999999899999999999887776665655554444 4888884 4432 23
Q ss_pred CCcEEEEecCCCccceeeeccCCCCeEEEEEcC-CCCEEEEEecC------CcEEEEeCCCCccccceeccc--cceEEE
Q psy6213 162 NGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHP-EHAWLATASRD------KTIKVWDLSIKPSLEYSINTI--ASVSRI 232 (330)
Q Consensus 162 dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~--~~v~~~ 232 (330)
+..|++||+.++ + ...+..+...+..+.|+| +|+.|+....+ ..|.++|........ ...+. ..+..+
T Consensus 167 ~~~l~~~d~~~g-~-~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~ 243 (388)
T 3pe7_A 167 CCRLMRVDLKTG-E-STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK-VKTHAEGESCTHE 243 (388)
T ss_dssp CEEEEEEETTTC-C-EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE-SCCCCTTEEEEEE
T ss_pred cceEEEEECCCC-c-eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE-eeeCCCCcccccc
Confidence 467999999874 3 344445667789999999 99998887753 378888887653322 22222 357889
Q ss_pred EEcCCCCeEEEEeecccC--CeEEEEEccCCCcc-ceEeecCCC---CeEEEEEecCCCEEEEe---------ecCCeEe
Q psy6213 233 KWRPQRKFHLASCSLVVD--SSVNVWDIRRPYIP-LASFTEHKD---VVSGLAWRGDPQLFIAS---------SRVSIIP 297 (330)
Q Consensus 233 ~~~~~~~~l~~~~~~~~~--~~i~i~d~~~~~~~-~~~~~~~~~---~v~~~~~~~~~~~l~s~---------~~dg~i~ 297 (330)
+|+|||+.++........ ..|++||+.+++.. +.....+.. ....++|+|||+.|+.. ..+..|+
T Consensus 244 ~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~ 323 (388)
T 3pe7_A 244 FWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLY 323 (388)
T ss_dssp EECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEE
T ss_pred eECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEE
Confidence 999999986555541111 24999999988631 222222110 01223799999988864 4466899
Q ss_pred eeecc
Q psy6213 298 RAKNI 302 (330)
Q Consensus 298 iw~~~ 302 (330)
+|+..
T Consensus 324 ~~d~~ 328 (388)
T 3pe7_A 324 VFNMK 328 (388)
T ss_dssp EEETT
T ss_pred EEecc
Confidence 99754
No 173
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.85 E-value=1e-18 Score=143.79 Aligned_cols=240 Identities=14% Similarity=0.120 Sum_probs=174.9
Q ss_pred ceeeeeecccCCcEEEEEcCC------------------------CcEEEEECCCCCCCceeEEec-ccccceeEEEEEe
Q psy6213 53 SCNDVAWSCIEENHIATGATN------------------------GAVVVWNLGQISRSKQERVFN-DHKRTVNKVSFHY 107 (330)
Q Consensus 53 ~v~~~~~~~~~~~~l~~~~~d------------------------g~i~iw~~~~~~~~~~~~~~~-~~~~~i~~i~~~~ 107 (330)
.+.+++++| +++++++...+ +.|.+||..+ ++....+. .+-.....++++|
T Consensus 25 ~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~---g~~~~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 25 QVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN---AEILQSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp CEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT---CCEEEEECTTTCSSEEEEEECT
T ss_pred CceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCC---CeEEeccCCCccCCceEEEECC
Confidence 368999999 89988888777 4799999876 45544443 3445788999998
Q ss_pred cCCCEEEEEecCCcEEEEEeecCc-eeeeee---------cCCCCeEEEEEcC-CCCcEEEEEe-cCCcEEEEecCCCcc
Q psy6213 108 VESNWLISGSQDGTMRLFDIRCQE-STKIFH---------SNTESVRDVEFNP-HSPYAFASVS-ENGTIQQWDVRRPEK 175 (330)
Q Consensus 108 ~~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~---------~~~~~v~~~~~~~-~~~~~~~~~~-~dg~i~i~d~~~~~~ 175 (330)
+++++++...++.|+.||..... .+..+. .+......++++| ++. ++++.+ .++.|++||.. +.
T Consensus 101 -~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~~~~~I~~~~~~--g~ 176 (329)
T 3fvz_A 101 -DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDGYCNSRIVQFSPS--GK 176 (329)
T ss_dssp -TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEECSSCCEEEEECTT--SC
T ss_pred -CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeCCCCCeEEEEcCC--CC
Confidence 88888888889999999986442 444442 2334688999999 565 677775 68999999944 44
Q ss_pred ceeeecc----------CCCCeEEEEEcCC-CCEEEEEecCCcEEEEeCCCCccccce--eccccceEEEEEcCCCCeEE
Q psy6213 176 CFYQFTA----------HSGPIFACDWHPE-HAWLATASRDKTIKVWDLSIKPSLEYS--INTIASVSRIKWRPQRKFHL 242 (330)
Q Consensus 176 ~~~~~~~----------~~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~ 242 (330)
.+..+.. +......++++|+ +.++++...++.|++||..+++..... ......+..++|+| +. ++
T Consensus 177 ~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~-~~ 254 (329)
T 3fvz_A 177 FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GF-LF 254 (329)
T ss_dssp EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TE-EE
T ss_pred EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CE-EE
Confidence 4444432 2234889999998 777788888899999999866443333 22456788999999 32 23
Q ss_pred EEeec-----ccCCeEEEEEccCCCccceEe---ecCCCCeEEEEEecCCCEEEEeecCCeEeeeeccc
Q psy6213 243 ASCSL-----VVDSSVNVWDIRRPYIPLASF---TEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIK 303 (330)
Q Consensus 243 ~~~~~-----~~~~~i~i~d~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 303 (330)
...+. ..+..|++||..+++. +..+ ..+...+.+++++|+|.++++...++.|++|+...
T Consensus 255 ~~~g~~~v~~~~~~~v~~~~~~~g~~-~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 255 AVNGKPYFGDQEPVQGFVMNFSSGEI-IDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEECCCCTTCSCCCCEEEEETTTCCE-EEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred EeCCCEEeccCCCcEEEEEEcCCCeE-EEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 22220 0355899999998875 5555 35667799999999998888888999999997653
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.85 E-value=1.5e-18 Score=143.09 Aligned_cols=268 Identities=10% Similarity=0.049 Sum_probs=179.0
Q ss_pred cccceEEEEeeCCCeeec-C-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEEC
Q psy6213 4 LSPVHKHGLKADNGLAQP-S-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNL 81 (330)
Q Consensus 4 ~~~v~~~~~s~~~~~~~~-g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~ 81 (330)
...|.+++|++++..++. . ++.++.|. ++....+..+. ..+.+++|+| ++++++++..++.|.+||.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-------~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~ 73 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTIT---AEPWLEISKKG-------LQLEGLNFDR-QGQLFLLDVFEGNIFKINP 73 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEEE---CEEEEEEESSC-------CCEEEEEECT-TSCEEEEETTTCEEEEECT
T ss_pred ccccceeeecCCccceeEEeecccCcccc---cceeEEEeccC-------ccccCcEECC-CCCEEEEECCCCEEEEEeC
Confidence 356889999999887443 4 88888882 22222221111 1247899998 8888888888999999998
Q ss_pred CCCCCCceeEEecccccceeEEEEEecCCCEEEEEecC----CcEEEEEeecCceeeeee--cCCCCeEEEEEcCCCCcE
Q psy6213 82 GQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQD----GTMRLFDIRCQESTKIFH--SNTESVRDVEFNPHSPYA 155 (330)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~ 155 (330)
.+ .+.......+...+.+++++| +++++++...+ +.|.+||.++++....+. .....+..++++|++. +
T Consensus 74 ~~---~~~~~~~~~~~~~~~~i~~~~-dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l 148 (333)
T 2dg1_A 74 ET---KEIKRPFVSHKANPAAIKIHK-DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG-F 148 (333)
T ss_dssp TT---CCEEEEEECSSSSEEEEEECT-TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC-E
T ss_pred CC---CcEEEEeeCCCCCcceEEECC-CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC-E
Confidence 76 343333334567899999998 77877777666 689999988776543332 2345789999999997 5
Q ss_pred EEEEec------CCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEE-EEecCCcEEEEeCCC-Cccccc-----e
Q psy6213 156 FASVSE------NGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLA-TASRDKTIKVWDLSI-KPSLEY-----S 222 (330)
Q Consensus 156 ~~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~~~-~~~~~~-----~ 222 (330)
+++... .+.|..+|... ++ ...+......+..++|+|+++.++ +.+.++.|.+||+.. +..... .
T Consensus 149 ~v~~~~~~~~~~~~~l~~~~~~~-~~-~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~ 226 (333)
T 2dg1_A 149 YFTDFRGYSTNPLGGVYYVSPDF-RT-VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIP 226 (333)
T ss_dssp EEEECCCBTTBCCEEEEEECTTS-CC-EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEE
T ss_pred EEEeccccccCCCceEEEEeCCC-CE-EEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEE
Confidence 555443 35566666654 22 222333345678999999998665 445678999999864 222111 0
Q ss_pred --eccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCC------CeEEEEEecCCCEEEEeecCC
Q psy6213 223 --INTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKD------VVSGLAWRGDPQLFIASSRVS 294 (330)
Q Consensus 223 --~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~------~v~~~~~~~~~~~l~s~~~dg 294 (330)
......+..++++++|.. +++.. .++.|.+||.. ++. +..+..+.. .+.+++|+||++.|+.++.++
T Consensus 227 ~~~~~~~~~~~i~~d~~G~l-~v~~~--~~~~v~~~d~~-g~~-~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 227 YYFTGHEGPDSCCIDSDDNL-YVAMY--GQGRVLVFNKR-GYP-IGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp EECCSSSEEEEEEEBTTCCE-EEEEE--TTTEEEEECTT-SCE-EEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred EecCCCCCCCceEECCCCCE-EEEEc--CCCEEEEECCC-CCE-EEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 011136788999999985 44444 47899999984 433 445544332 689999999987777666654
No 175
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.85 E-value=4.8e-18 Score=136.97 Aligned_cols=243 Identities=11% Similarity=0.085 Sum_probs=169.7
Q ss_pred CcccceEEEEeeCCCeeec-C-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcC-CCcEEEE
Q psy6213 3 YLSPVHKHGLKADNGLAQP-S-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGAT-NGAVVVW 79 (330)
Q Consensus 3 H~~~v~~~~~s~~~~~~~~-g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg~i~iw 79 (330)
|...+.+++++|+|+++++ . ++.|.+||.+ ++....+.... ........+..+++.+.++.++++... ++.|.+|
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~-~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECG-KRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBS-SSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccC-CCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 4567899999999998544 4 9999999987 44444332211 111112235889995326666666643 7899999
Q ss_pred ECCCCCCCceeEEec-ccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeee--cCCCCeEEEEEcCCCCcEE
Q psy6213 80 NLGQISRSKQERVFN-DHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFH--SNTESVRDVEFNPHSPYAF 156 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~ 156 (330)
+.. .+....+. .+...+..+++.| +++++++...++.|.+||.. ++.+..+. .+...+..++++|++. ++
T Consensus 106 d~~----g~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~-l~ 178 (286)
T 1q7f_A 106 NQY----GQFVRKFGATILQHPRGVTVDN-KGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQE-IF 178 (286)
T ss_dssp CTT----SCEEEEECTTTCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSE-EE
T ss_pred CCC----CcEEEEecCccCCCceEEEEeC-CCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCC-EE
Confidence 943 34444443 3345788999998 77888887778999999964 55555554 2345689999999987 67
Q ss_pred EEEecCCcEEEEecCCCccceeeeccC--CCCeEEEEEcCCCCEEEEEecCC-cEEEEeCCCCccccceecc--ccceEE
Q psy6213 157 ASVSENGTIQQWDVRRPEKCFYQFTAH--SGPIFACDWHPEHAWLATASRDK-TIKVWDLSIKPSLEYSINT--IASVSR 231 (330)
Q Consensus 157 ~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~dg-~i~i~d~~~~~~~~~~~~~--~~~v~~ 231 (330)
++...++.|++||... ..+..+..+ ...+..++++|+|+++++...++ .|.+||.... .......+ ...+..
T Consensus 179 v~~~~~~~i~~~~~~g--~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g~-~~~~~~~~~~~~~~~~ 255 (286)
T 1q7f_A 179 ISDNRAHCVKVFNYEG--QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDGQ-LISALESKVKHAQCFD 255 (286)
T ss_dssp EEEGGGTEEEEEETTC--CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTSC-EEEEEEESSCCSCEEE
T ss_pred EEECCCCEEEEEcCCC--CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCCC-EEEEEcccCCCCccee
Confidence 7777889999999753 344444332 35789999999999888888776 9999996543 33322222 234789
Q ss_pred EEEcCCCCeEEEEeecccCCeEEEEEccCC
Q psy6213 232 IKWRPQRKFHLASCSLVVDSSVNVWDIRRP 261 (330)
Q Consensus 232 ~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~ 261 (330)
++++|+|+ ++++. .++.|++|++...
T Consensus 256 i~~~~~g~-l~vs~---~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 256 VALMDDGS-VVLAS---KDYRLYIYRYVQL 281 (286)
T ss_dssp EEEETTTE-EEEEE---TTTEEEEEECSCC
T ss_pred EEECCCCc-EEEEC---CCCeEEEEEcccc
Confidence 99999997 45554 4899999998653
No 176
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.84 E-value=2.3e-18 Score=143.29 Aligned_cols=261 Identities=11% Similarity=0.047 Sum_probs=175.9
Q ss_pred EEEEeeCCCe-eec---------C--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcC--CC
Q psy6213 9 KHGLKADNGL-AQP---------S--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGAT--NG 74 (330)
Q Consensus 9 ~~~~s~~~~~-~~~---------g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--dg 74 (330)
.++|+|||++ .++ | ++.|.+||..+.+....+........ .......++++| ++++|+++.. ++
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~-~g~~p~~i~~sp-dg~~l~v~n~~~~~ 131 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQ-GLNYDGLFRQTT-DGKFIVLQNASPAT 131 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCC-BCCCGGGEEECT-TSSEEEEEEESSSE
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccc-cCCCcceEEECC-CCCEEEEECCCCCC
Confidence 7899999998 333 1 56799999998887766654321110 111237899999 9999988864 57
Q ss_pred cEEEEECCCCCCCceeEE-ecccccceeEEEEEecCCCEEEEEecCCcEEEEEeec-Cceee------eeecCCCCeEEE
Q psy6213 75 AVVVWNLGQISRSKQERV-FNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC-QESTK------IFHSNTESVRDV 146 (330)
Q Consensus 75 ~i~iw~~~~~~~~~~~~~-~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~------~~~~~~~~v~~~ 146 (330)
.|.+||+.+ .+.+.. +.. .....+.+.|.+...+++.+.||.+.+|++.. ++... .+.....++ .+
T Consensus 132 ~v~v~d~~~---~~~~~~~i~~--~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~ 205 (361)
T 2oiz_A 132 SIGIVDVAK---GDYVEDVTAA--AGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FI 205 (361)
T ss_dssp EEEEEETTT---TEEEEEEGGG--TTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CS
T ss_pred eEEEEECCC---CcEEEEEecC--CCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EE
Confidence 899999988 555555 432 12233556775557888899999999999865 44331 122222222 33
Q ss_pred EEcCCCCcEEEEEecCCcEEEEecCCCccce-eeecc------C----CCCeEEEEEcCCCCEEEEEec-----------
Q psy6213 147 EFNPHSPYAFASVSENGTIQQWDVRRPEKCF-YQFTA------H----SGPIFACDWHPEHAWLATASR----------- 204 (330)
Q Consensus 147 ~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~-~~~~~------~----~~~i~~~~~~~~~~~l~~~~~----------- 204 (330)
.+++++.. ++..+.++.++++|+......+ ..+.. + ......++|+|+++.++++..
T Consensus 206 ~~~~~g~~-~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~ 284 (361)
T 2oiz_A 206 APALDKDK-AHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFP 284 (361)
T ss_dssp CCEECSSE-EEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCC
T ss_pred EecccCCE-EEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCC
Confidence 44677764 5566778999999987532111 11110 0 112223789999887777643
Q ss_pred CCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCC--CccceEeecCCCCeEEEEEec
Q psy6213 205 DKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRP--YIPLASFTEHKDVVSGLAWRG 282 (330)
Q Consensus 205 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~--~~~~~~~~~~~~~v~~~~~~~ 282 (330)
.+.|.+||+.+.+.+.....+. +..++|+|+|+++ ++++ . +.|.+||..++ +. +..+..+......++++|
T Consensus 285 ~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l-~v~n--~-~~v~v~D~~t~~l~~-~~~i~~~G~~P~~~~~~p 357 (361)
T 2oiz_A 285 AAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLM-LTLD--G-GNVNVYDISQPEPKL-LRTIEGAAEASLQVQFHP 357 (361)
T ss_dssp CSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEE-EEEC--S-SCEEEEECSSSSCEE-EEEETTSCSSEEEEEECC
T ss_pred CceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEE-EEeC--C-CeEEEEECCCCccee-eEEeccCCCCcEEEEecC
Confidence 3479999999986554444333 9999999999974 4555 4 99999999998 55 566556677889999999
Q ss_pred CCC
Q psy6213 283 DPQ 285 (330)
Q Consensus 283 ~~~ 285 (330)
+|+
T Consensus 358 ~G~ 360 (361)
T 2oiz_A 358 VGG 360 (361)
T ss_dssp CSC
T ss_pred CCC
Confidence 985
No 177
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.84 E-value=7.4e-17 Score=130.63 Aligned_cols=275 Identities=7% Similarity=-0.030 Sum_probs=187.7
Q ss_pred CcccceEEEEeeCCCe-eecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEE
Q psy6213 3 YLSPVHKHGLKADNGL-AQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWN 80 (330)
Q Consensus 3 H~~~v~~~~~s~~~~~-~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~ 80 (330)
+...+.++++.++|++ ++.. ++.|.+||.. ++.... .... ....+.++++.+ ++.++++...++.|..|+
T Consensus 13 ~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~-~~~~-----~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~ 84 (299)
T 2z2n_A 13 QDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEY-PLPT-----PDAKVMCLTISS-DGEVWFTENAANKIGRIT 84 (299)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEE-ECSS-----TTCCEEEEEECT-TSCEEEEETTTTEEEEEC
T ss_pred cCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEe-cCCc-----ccCceeeEEECC-CCCEEEeCCCCCeEEEEC
Confidence 3467899999999998 5555 8999999988 554322 1111 112358899998 888888777788899998
Q ss_pred CCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeee-eecCCCCeEEEEEcCCCCcEEEEE
Q psy6213 81 LGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKI-FHSNTESVRDVEFNPHSPYAFASV 159 (330)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~ 159 (330)
... ......+......+..+++.| ++.++++...++.|..||. +++.... .......+..+++.+++. ++++.
T Consensus 85 ~~g---~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~ 158 (299)
T 2z2n_A 85 KKG---IIKEYTLPNPDSAPYGITEGP-NGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNA-LWFTE 158 (299)
T ss_dssp TTS---CEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSC-EEEEE
T ss_pred CCC---cEEEEeCCCcCCCceeeEECC-CCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCC-EEEEe
Confidence 753 111122223445788999997 7787777777889999998 5544322 222345689999999986 66666
Q ss_pred ecCCcEEEEecCCCcccee-eeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcccccee-ccccceEEEEEcCC
Q psy6213 160 SENGTIQQWDVRRPEKCFY-QFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI-NTIASVSRIKWRPQ 237 (330)
Q Consensus 160 ~~dg~i~i~d~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~ 237 (330)
..++.|..||. + ++... ........+..++++++|++.++...++.|..||. +++...... .....+..++++++
T Consensus 159 ~~~~~i~~~~~-~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~ 235 (299)
T 2z2n_A 159 NQNNAIGRITE-S-GDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAG 235 (299)
T ss_dssp TTTTEEEEECT-T-CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECST
T ss_pred CCCCEEEEEcC-C-CcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCC
Confidence 66789999998 4 33222 23334456889999999997777767889999998 553322211 23467899999999
Q ss_pred CCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeee
Q psy6213 238 RKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAK 300 (330)
Q Consensus 238 ~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~ 300 (330)
|.. +++.. .++.|..||.. +.........+...+.++++ +++++.++.+ .+.+..++
T Consensus 236 g~l-~v~~~--~~~~i~~~d~~-g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~ 292 (299)
T 2z2n_A 236 IDL-WFTEW--GANKIGRLTSN-NIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLT 292 (299)
T ss_dssp TCE-EEEET--TTTEEEEEETT-TEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEE
T ss_pred CCE-EEecc--CCceEEEECCC-CceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEE
Confidence 984 55553 48999999983 43211222344567999999 8888777655 44555544
No 178
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.83 E-value=1.2e-18 Score=156.86 Aligned_cols=243 Identities=8% Similarity=-0.021 Sum_probs=154.4
Q ss_pred EEEEe--eCCCe-eecC---CCeEEEEEcC--C-cceeeeeceeeccccccccceeeeeecccCCcEEEEEcCC------
Q psy6213 9 KHGLK--ADNGL-AQPS---RNVFKIFLIK--D-TEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATN------ 73 (330)
Q Consensus 9 ~~~~s--~~~~~-~~~g---d~~i~iw~~~--~-~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------ 73 (330)
...|+ |||+. ++.. +..|.++++. . ++.. .+.... .......+..++|+| +++.|++++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~-~l~~~~--~~~~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~ 156 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPR-PLTPVS--AVGGGLRWADPVLLP-ERGEVWCMAEEFTGEGP 156 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCE-ECSCCC--CSTTCEEEEEEEEET-TTTEEEEEEEEECSSST
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCE-eccCCc--cCCCCccccCcEECC-CCCEEEEEEecccCCCC
Confidence 55565 99998 6655 4556666655 2 3322 222110 000122357899999 99999988876
Q ss_pred ----CcEEEEECCCCC--CCceeEEec-ccccceeEEEEEecCCCEEEEEecC--------CcEEEEEee-cC---ceee
Q psy6213 74 ----GAVVVWNLGQIS--RSKQERVFN-DHKRTVNKVSFHYVESNWLISGSQD--------GTMRLFDIR-CQ---ESTK 134 (330)
Q Consensus 74 ----g~i~iw~~~~~~--~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~d--------~~i~i~d~~-~~---~~~~ 134 (330)
..|.+||+.+.. .......+. .+...+..++|+| ++++|+.++.+ ..|++||+. ++ +...
T Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Sp-DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~ 235 (662)
T 3azo_A 157 SDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSP-DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT 235 (662)
T ss_dssp TCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECT-TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE
T ss_pred CCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECC-CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEE
Confidence 579999987610 002334444 5567888899999 88988877755 379999998 56 4444
Q ss_pred eeecCCCCeEEEEEcCCCCcEEEEEecCC--cEEEEecCCCccceeeeccCCCC--------eEEEEEcCCCCEEEEEec
Q psy6213 135 IFHSNTESVRDVEFNPHSPYAFASVSENG--TIQQWDVRRPEKCFYQFTAHSGP--------IFACDWHPEHAWLATASR 204 (330)
Q Consensus 135 ~~~~~~~~v~~~~~~~~~~~~~~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~--------i~~~~~~~~~~~l~~~~~ 204 (330)
....+...+..++|+|+|+ +++++..++ .|.+||+.+ ++.......+... +..++|+|++++++++..
T Consensus 236 l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~-~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~ 313 (662)
T 3azo_A 236 LLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPAT-GAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK 313 (662)
T ss_dssp EEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTT-CCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS
T ss_pred eCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCC-CceeecccccccccCccccccCceEeEeCCCEEEEEEEc
Confidence 4444577899999999999 788888888 566666654 3332222222221 567899999999999998
Q ss_pred CCcEEEE--eCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCC--eEEEEEccCCC
Q psy6213 205 DKTIKVW--DLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDS--SVNVWDIRRPY 262 (330)
Q Consensus 205 dg~i~i~--d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~--~i~i~d~~~~~ 262 (330)
+.+++| |+.+++ ......+...+..+ +++++..++..++. .+. .|.++|+.+++
T Consensus 314 -~~~~l~~~d~~~~~-~~~l~~~~~~~~~~-~s~~~~~~~~~~~~-~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 314 -GAAVLGILDPESGE-LVDAAGPWTEWAAT-LTVSGTRAVGVAAS-PRTAYEVVELDTVTGR 371 (662)
T ss_dssp -SSCEEEEEETTTTE-EEECCSSCCEEEEE-EEEETTEEEEEEEE-TTEEEEEEEEETTTCC
T ss_pred -CccEEEEEECCCCc-EEEecCCCCeEEEE-EecCCCEEEEEEcC-CCCCCEEEEEECCCCc
Confidence 999999 555443 33333445556665 14445444433331 343 56666766665
No 179
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.83 E-value=9.9e-18 Score=133.86 Aligned_cols=240 Identities=7% Similarity=-0.020 Sum_probs=166.5
Q ss_pred ceeeeeecccCCcEEE-EEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCc
Q psy6213 53 SCNDVAWSCIEENHIA-TGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQE 131 (330)
Q Consensus 53 ~v~~~~~~~~~~~~l~-~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (330)
...++++++ ++++++ +...++.|.+|+..+ .........+...+.++++.+ +++++++.. ++.|..||.....
T Consensus 25 ~p~~i~~~~-~g~l~v~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDS-AGNVYVTSEGMYGRVVKLATGS---TGTTVLPFNGLYQPQGLAVDG-AGTVYVTDF-NNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECT-TCCEEEEECSSSCEEEEECC--------EECCCCSCCSCCCEEECT-TCCEEEEET-TTEEEEECTTCSC
T ss_pred CccceEECC-CCCEEEEccCCCCcEEEecCCC---cccceEeeCCcCCcceeEECC-CCCEEEEcC-CCEEEEEeCCCce
Confidence 358899999 888776 546788999998765 222211122335678899997 777666655 8899999987554
Q ss_pred eeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEE
Q psy6213 132 STKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVW 211 (330)
Q Consensus 132 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 211 (330)
...........+..+++++++. ++++...++.|.+|+..+. ............+..++++++|+++++...++.|.+|
T Consensus 99 ~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~-~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~ 176 (270)
T 1rwi_B 99 QTVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSK-TQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKL 176 (270)
T ss_dssp CEECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCC-SCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEE
T ss_pred EeeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCc-eeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEE
Confidence 3322222335789999999987 6777777889999986542 2222222233467899999999977777778899999
Q ss_pred eCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEee
Q psy6213 212 DLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291 (330)
Q Consensus 212 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 291 (330)
|................+..++++++|. ++++.. .++.|.+||...... ......+...+.+++++|+|+++++..
T Consensus 177 ~~~~~~~~~~~~~~~~~p~~i~~d~~g~-l~v~~~--~~~~v~~~~~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~ 252 (270)
T 1rwi_B 177 EAESNNQVVLPFTDITAPWGIAVDEAGT-VYVTEH--NTNQVVKLLAGSTTS-TVLPFTGLNTPLAVAVDSDRTVYVADR 252 (270)
T ss_dssp CTTTCCEEECCCSSCCSEEEEEECTTCC-EEEEET--TTSCEEEECTTCSCC-EECCCCSCSCEEEEEECTTCCEEEEEG
T ss_pred ecCCCceEeecccCCCCceEEEECCCCC-EEEEEC--CCCcEEEEcCCCCcc-eeeccCCCCCceeEEECCCCCEEEEEC
Confidence 9877643332223336788999999996 455554 488999999876543 222223335789999999999888889
Q ss_pred cCCeEeeeeccce
Q psy6213 292 RVSIIPRAKNIKI 304 (330)
Q Consensus 292 ~dg~i~iw~~~~~ 304 (330)
.++.|++++....
T Consensus 253 ~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 253 GNDRVVKLTSLEH 265 (270)
T ss_dssp GGTEEEEECCCGG
T ss_pred CCCEEEEEcCCCc
Confidence 9999999976543
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.82 E-value=3.5e-17 Score=148.39 Aligned_cols=248 Identities=10% Similarity=0.052 Sum_probs=170.3
Q ss_pred CcccceEEEEeeCCCeeecC---CC----eEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCc
Q psy6213 3 YLSPVHKHGLKADNGLAQPS---RN----VFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGA 75 (330)
Q Consensus 3 H~~~v~~~~~s~~~~~~~~g---d~----~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 75 (330)
|...+..++|||||++++.+ +| .|++||+++++..... ..... +..++|+| +++.|+.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~-~~~~~-------~~~~~wsp-Dg~~l~~~~~~~~ 193 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDV-LERVK-------FSCMAWTH-DGKGMFYNAYPQQ 193 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEE-EEEEC-------SCCEEECT-TSSEEEEEECCCC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccc-ccCcc-------cceEEEEe-CCCEEEEEEECCc
Confidence 33468899999999995543 33 8999999998866532 11111 36799999 9999988887765
Q ss_pred ----------------EEEEECCCCCCCceeEEec--ccccceeEEEEEecCCCEEEEEec-----CCcEEEEEeec---
Q psy6213 76 ----------------VVVWNLGQISRSKQERVFN--DHKRTVNKVSFHYVESNWLISGSQ-----DGTMRLFDIRC--- 129 (330)
Q Consensus 76 ----------------i~iw~~~~~~~~~~~~~~~--~~~~~i~~i~~~~~~~~~l~~~~~-----d~~i~i~d~~~--- 129 (330)
|++|++.+.. ......+. .+...+..+.|+| ++++|+.++. +..|++||+.+
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~l~t~~-~~~~~v~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 271 (710)
T 2xdw_A 194 DGKSDGTETSTNLHQKLYYHVLGTDQ-SEDILCAEFPDEPKWMGGAELSD-DGRYVLLSIREGCDPVNRLWYCDLQQESN 271 (710)
T ss_dssp SSCCSSSCCCCCCCCEEEEEETTSCG-GGCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECSSSSCCEEEEEEGGGSSS
T ss_pred cccccccccccCCCCEEEEEECCCCc-ccceEEeccCCCCeEEEEEEEcC-CCCEEEEEEEccCCCccEEEEEECccccc
Confidence 9999997732 11122222 3455678999998 8888877664 56899999986
Q ss_pred ---Cc-eeeeeecCCCCeEEEEEcCCCCcEEEEEecC---CcEEEEecCCCcc-ceeeeccCCC--CeEEEEEcCCCCEE
Q psy6213 130 ---QE-STKIFHSNTESVRDVEFNPHSPYAFASVSEN---GTIQQWDVRRPEK-CFYQFTAHSG--PIFACDWHPEHAWL 199 (330)
Q Consensus 130 ---~~-~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d---g~i~i~d~~~~~~-~~~~~~~~~~--~i~~~~~~~~~~~l 199 (330)
+. ....+..+...+.. .|+|+++.+++.+..+ +.|.+||+.++.. ....+..+.. .+..++|++++.++
T Consensus 272 ~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv 350 (710)
T 2xdw_A 272 GITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLV 350 (710)
T ss_dssp SSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEE
T ss_pred ccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEE
Confidence 43 35555555555554 5889998655555433 3699999987432 2344444443 67889999888888
Q ss_pred EEEecCCc--EEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEee-cccCCeEEEEEccCCC
Q psy6213 200 ATASRDKT--IKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCS-LVVDSSVNVWDIRRPY 262 (330)
Q Consensus 200 ~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~~~~i~i~d~~~~~ 262 (330)
++...|+. |.+||+.+++.......+...+..+.++|+++.++.+.+ ....+.++.||+.+++
T Consensus 351 ~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 351 LCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 88888885 566777555433333334667889999999987665543 1235799999998765
No 181
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.81 E-value=6.5e-17 Score=132.80 Aligned_cols=265 Identities=9% Similarity=0.028 Sum_probs=181.1
Q ss_pred CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeE
Q psy6213 23 RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNK 102 (330)
Q Consensus 23 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~ 102 (330)
++.|.++|.++++.......... ...+......+++. ++.++++...++.|.+||..+ .+.+..+. .......
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~n-~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t---~~~~~~i~-~~~~p~~ 88 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRAN-GFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINT---FKEVGRIT-GFTSPRY 88 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHHH-SSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTT---CCEEEEEE-CCSSEEE
T ss_pred CceEEEEECCCCEEhhhhHhhhc-CcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcc---cEEEEEcC-CCCCCcE
Confidence 78999999999887654421100 11122223667764 566677777789999999988 66666664 3467889
Q ss_pred EEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCC-----CCeEEEEEcCCCCcEEEEEe-cCCcEEEEecCCCccc
Q psy6213 103 VSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNT-----ESVRDVEFNPHSPYAFASVS-ENGTIQQWDVRRPEKC 176 (330)
Q Consensus 103 i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~~~~-~dg~i~i~d~~~~~~~ 176 (330)
+++++ ++.++++...++.|.+||..+++....+.... .....+++ ++..++++.. .++.|.++|+.+ .+.
T Consensus 89 i~~~~-~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t-~~~ 164 (328)
T 3dsm_A 89 IHFLS-DEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTET-DKV 164 (328)
T ss_dssp EEEEE-TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTT-TEE
T ss_pred EEEeC-CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCC-CeE
Confidence 99987 66554554478999999999988777666433 14556777 3444555544 488999999997 455
Q ss_pred eeeeccCCCCeEEEEEcCCCCEEEEEecC----------CcEEEEeCCCCcccccee-ccccceEEEEEcCCCCeEEEEe
Q psy6213 177 FYQFTAHSGPIFACDWHPEHAWLATASRD----------KTIKVWDLSIKPSLEYSI-NTIASVSRIKWRPQRKFHLASC 245 (330)
Q Consensus 177 ~~~~~~~~~~i~~~~~~~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~ 245 (330)
...+.. ......+.++|+|++++++..+ +.|.++|..+.+...... ........++|+|+++.++++
T Consensus 165 ~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~- 242 (328)
T 3dsm_A 165 VDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWI- 242 (328)
T ss_dssp EEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEE-
T ss_pred EEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEE-
Confidence 555543 3446789999999977776654 789999998875432222 223478999999999975554
Q ss_pred ecccCCeEEEEEccCCCccceE-eecCCCCeEEEEEec-CCCEEEEe----ecCCeEeeeeccce
Q psy6213 246 SLVVDSSVNVWDIRRPYIPLAS-FTEHKDVVSGLAWRG-DPQLFIAS----SRVSIIPRAKNIKI 304 (330)
Q Consensus 246 ~~~~~~~i~i~d~~~~~~~~~~-~~~~~~~v~~~~~~~-~~~~l~s~----~~dg~i~iw~~~~~ 304 (330)
++.|.+||..+++..... .........+++++| ++.+.++. ..++.|.+|+....
T Consensus 243 ----~~~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~ 303 (328)
T 3dsm_A 243 ----NNDIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGK 303 (328)
T ss_dssp ----SSSEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCC
T ss_pred ----ccEEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCC
Confidence 238999999877642111 222245789999999 56666665 57899999986543
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.81 E-value=1.1e-16 Score=145.24 Aligned_cols=238 Identities=9% Similarity=0.054 Sum_probs=164.3
Q ss_pred ceeeeeecccCCcEEEEEcCCC-----cEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCc------
Q psy6213 53 SCNDVAWSCIEENHIATGATNG-----AVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGT------ 121 (330)
Q Consensus 53 ~v~~~~~~~~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~------ 121 (330)
.+..++||| ++++||.+..++ .|++||+.+ ++...... ....+..++|+| +++.|+.++.++.
T Consensus 126 ~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v~d~~t---g~~~~~~~-~~~~~~~~~wsp-Dg~~l~~~~~~~~~~~~~~ 199 (710)
T 2xdw_A 126 ALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDG---AKELPDVL-ERVKFSCMAWTH-DGKGMFYNAYPQQDGKSDG 199 (710)
T ss_dssp EEEEEEECT-TSSEEEEEEEETTCSCEEEEEEETTT---TEEEEEEE-EEECSCCEEECT-TSSEEEEEECCCCSSCCSS
T ss_pred EEEEEEECC-CCCEEEEEEcCCCCceEEEEEEECCC---CCCCcccc-cCcccceEEEEe-CCCEEEEEEECCccccccc
Confidence 468899999 999988765543 899999987 44443222 222367899999 8888888887765
Q ss_pred ----------EEEEEeecCcee--eeeec--CCCCeEEEEEcCCCCcEEEEEec----CCcEEEEecCC------Cccce
Q psy6213 122 ----------MRLFDIRCQEST--KIFHS--NTESVRDVEFNPHSPYAFASVSE----NGTIQQWDVRR------PEKCF 177 (330)
Q Consensus 122 ----------i~i~d~~~~~~~--~~~~~--~~~~v~~~~~~~~~~~~~~~~~~----dg~i~i~d~~~------~~~~~ 177 (330)
|++|++.+++.. ..+.. +...+..+.|+|++++++++... +..|++||+.+ +....
T Consensus 200 ~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~ 279 (710)
T 2xdw_A 200 TETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKW 279 (710)
T ss_dssp SCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCC
T ss_pred cccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccce
Confidence 999999877632 22232 34557899999999975554432 56899999976 33245
Q ss_pred eeeccCCCCeEEEEEcCCCCEEEEEecCC----cEEEEeCCCCcc--ccceecccc--ceEEEEEcCCCCeEEEEeeccc
Q psy6213 178 YQFTAHSGPIFACDWHPEHAWLATASRDK----TIKVWDLSIKPS--LEYSINTIA--SVSRIKWRPQRKFHLASCSLVV 249 (330)
Q Consensus 178 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg----~i~i~d~~~~~~--~~~~~~~~~--~v~~~~~~~~~~~l~~~~~~~~ 249 (330)
..+..+...+.. .|+|+|+.|+..+.++ .|.+||+.++.. ......+.. .+..++|++++. ++++.. .
T Consensus 280 ~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-lv~~~~--~ 355 (710)
T 2xdw_A 280 VKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNF-LVLCYL--H 355 (710)
T ss_dssp EEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTE-EEEEEE--E
T ss_pred EEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCE-EEEEEE--E
Confidence 556666665554 4888998887776533 599999987642 233333333 688899987665 566665 4
Q ss_pred CC--eEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEee----cCCeEeeeec
Q psy6213 250 DS--SVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS----RVSIIPRAKN 301 (330)
Q Consensus 250 ~~--~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~----~dg~i~iw~~ 301 (330)
++ .|.+|++.+++. ...+..+.+.+..++++|++..++... ..+.++.|+.
T Consensus 356 ~g~~~l~~~~~~~g~~-~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 356 DVKNTLQLHDLATGAL-LKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp TTEEEEEEEETTTCCE-EEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred CCEEEEEEEECCCCCE-EEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence 76 466677756654 566777777899999999987666432 3467888875
No 183
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.81 E-value=4.9e-18 Score=143.24 Aligned_cols=261 Identities=6% Similarity=-0.038 Sum_probs=165.2
Q ss_pred EEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCC---CcEEEEECCCCCCCceeEEecccccceeEEE
Q psy6213 28 IFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATN---GAVVVWNLGQISRSKQERVFNDHKRTVNKVS 104 (330)
Q Consensus 28 iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~ 104 (330)
..|..+++....+..+... .....+..++|+| ++++|+..... ..|.+||+.+ .+.......+......+.
T Consensus 14 ~~d~~~g~~~~~l~~~~~~--~~~~~~~~~~~Sp-dG~~l~~~~~~~g~~~l~~~d~~~---~~~~~l~~~~~~~~~~~~ 87 (396)
T 3c5m_A 14 FVDSDTQVKVTRLTPTDII--CHRNYFYQKCFTQ-DGKKLLFAGDFDGNRNYYLLNLET---QQAVQLTEGKGDNTFGGF 87 (396)
T ss_dssp EECTTTCCEEEECSCTTSC--EECCCTTSCCBCT-TSCEEEEEECTTSSCEEEEEETTT---TEEEECCCSSCBCTTTCE
T ss_pred eecCCCCcceEEEecCCCC--ccceeeecCcCCC-CCCEEEEEEecCCCceEEEEECCC---CcEEEeecCCCCccccce
Confidence 3466666655444322111 1111146789999 88887766443 3688888876 343333232322233478
Q ss_pred EEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEE-------------------EEEcCCCCcEEEEE----ec
Q psy6213 105 FHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRD-------------------VEFNPHSPYAFASV----SE 161 (330)
Q Consensus 105 ~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~-------------------~~~~~~~~~~~~~~----~~ 161 (330)
|+| +++.|+.++.++.|++||+.+++.......+...... +.|+|+++.+++.. ..
T Consensus 88 ~sp-dg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~ 166 (396)
T 3c5m_A 88 IST-DERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNP 166 (396)
T ss_dssp ECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCC
T ss_pred ECC-CCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCC
Confidence 998 8999999998889999999888766555544432222 34677777532222 35
Q ss_pred CCcEEEEecCCCccceeeeccCCCCeEEEEEcC-CCCEEEEEecC------CcEEEEeCCCCccccceecc-ccceEEEE
Q psy6213 162 NGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHP-EHAWLATASRD------KTIKVWDLSIKPSLEYSINT-IASVSRIK 233 (330)
Q Consensus 162 dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~-~~~v~~~~ 233 (330)
+..|++||+.++ +.. .+..+...+..+.|+| +++.|+..+.+ ..|.+||+...+........ ...+..++
T Consensus 167 ~~~l~~~d~~~g-~~~-~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~ 244 (396)
T 3c5m_A 167 TCRLIKVDIETG-ELE-VIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEF 244 (396)
T ss_dssp CEEEEEEETTTC-CEE-EEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEE
T ss_pred cceEEEEECCCC-cEE-eeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceE
Confidence 668999999873 333 3334667889999999 78877766543 36888998765322222221 34688899
Q ss_pred EcCCCCeEEEEeecccC--CeEEEEEccCCCccceEeecCCCCeEEEEEec-CCCEEEEee----------------cCC
Q psy6213 234 WRPQRKFHLASCSLVVD--SSVNVWDIRRPYIPLASFTEHKDVVSGLAWRG-DPQLFIASS----------------RVS 294 (330)
Q Consensus 234 ~~~~~~~l~~~~~~~~~--~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~s~~----------------~dg 294 (330)
|+|+|++++........ +.|++||+.+++. ..+..... .. +.|+| ||+++++++ .++
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~--~~l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~ 320 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKGQTDRVIYKANPETLEN--EEVMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDP 320 (396)
T ss_dssp ECTTSSCEEEEEEETTTCCEEEEEECTTTCCE--EEEEECCS-EE-EEEECSSSSEEEEEECCC----------CCCCCC
T ss_pred ECCCCCEEEEEecCCCCccceEEEEECCCCCe--EEeeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCC
Confidence 99999986666541112 4599999987753 22221122 33 89999 999888765 346
Q ss_pred eEeeeec
Q psy6213 295 IIPRAKN 301 (330)
Q Consensus 295 ~i~iw~~ 301 (330)
.|++|+.
T Consensus 321 ~i~~~d~ 327 (396)
T 3c5m_A 321 FLYVLNT 327 (396)
T ss_dssp EEEEEET
T ss_pred cEEEEec
Confidence 7888874
No 184
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.80 E-value=3.2e-17 Score=135.07 Aligned_cols=235 Identities=10% Similarity=0.074 Sum_probs=168.9
Q ss_pred eeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCcee
Q psy6213 54 CNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQEST 133 (330)
Q Consensus 54 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (330)
+.+++|++ +...++..+.++.++.|. ......+..+...+.+++|+| ++++++++..++.|.+||.++++..
T Consensus 8 ~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~ 79 (333)
T 2dg1_A 8 LPTLFYSG-KSNSAVPIISESELQTIT------AEPWLEISKKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIK 79 (333)
T ss_dssp CCBCCSCG-GGGCSSCCCCGGGSCEEE------CEEEEEEESSCCCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEE
T ss_pred cceeeecC-CccceeEEeecccCcccc------cceeEEEeccCccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEE
Confidence 57889998 777777777788899992 345555666667789999998 7888888888999999999887765
Q ss_pred eeeecCCCCeEEEEEcCCCCcEEEEEecC----CcEEEEecCCCccceeeec--cCCCCeEEEEEcCCCCEEEEEec---
Q psy6213 134 KIFHSNTESVRDVEFNPHSPYAFASVSEN----GTIQQWDVRRPEKCFYQFT--AHSGPIFACDWHPEHAWLATASR--- 204 (330)
Q Consensus 134 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~d----g~i~i~d~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~--- 204 (330)
.....+...+.+++++|++. ++++...+ +.|.+||..+. .....+. .+...+..++++|+|+++++...
T Consensus 80 ~~~~~~~~~~~~i~~~~dg~-l~v~~~~~~~~~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~ 157 (333)
T 2dg1_A 80 RPFVSHKANPAAIKIHKDGR-LFVCYLGDFKSTGGIFAATENGD-NLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYS 157 (333)
T ss_dssp EEEECSSSSEEEEEECTTSC-EEEEECTTSSSCCEEEEECTTSC-SCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBT
T ss_pred EEeeCCCCCcceEEECCCCc-EEEEeCCCCCCCceEEEEeCCCC-EEEEEEccCccCCcccceEECCCCCEEEEeccccc
Confidence 54434567899999999997 56666655 68999998863 3221222 23457899999999987776653
Q ss_pred ---CCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceE--------eecCCC
Q psy6213 205 ---DKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLAS--------FTEHKD 273 (330)
Q Consensus 205 ---dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~--------~~~~~~ 273 (330)
.+.|..+|..+++. .........+..++|+|+++.++++.. .++.|.+||+......... +.++ .
T Consensus 158 ~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~i~~~~dg~~l~v~~~--~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~ 233 (333)
T 2dg1_A 158 TNPLGGVYYVSPDFRTV-TPIIQNISVANGIALSTDEKVLWVTET--TANRLHRIALEDDGVTIQPFGATIPYYFTGH-E 233 (333)
T ss_dssp TBCCEEEEEECTTSCCE-EEEEEEESSEEEEEECTTSSEEEEEEG--GGTEEEEEEECTTSSSEEEEEEEEEEECCSS-S
T ss_pred cCCCceEEEEeCCCCEE-EEeecCCCcccceEECCCCCEEEEEeC--CCCeEEEEEecCCCcCcccccceEEEecCCC-C
Confidence 35566676655422 222233345788999999987666665 5889999999642111211 1122 4
Q ss_pred CeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 274 VVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 274 ~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
.+.+++++++|+++++...++.|.+|+..
T Consensus 234 ~~~~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 234 GPDSCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp EEEEEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred CCCceEECCCCCEEEEEcCCCEEEEECCC
Confidence 67889999999988888788999999764
No 185
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.80 E-value=7.3e-17 Score=128.80 Aligned_cols=238 Identities=7% Similarity=-0.000 Sum_probs=163.0
Q ss_pred cceEEEEeeCCCeee-c-C-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECC
Q psy6213 6 PVHKHGLKADNGLAQ-P-S-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLG 82 (330)
Q Consensus 6 ~v~~~~~s~~~~~~~-~-g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 82 (330)
...+++++++|++.+ + . ++.|.+|+..+....... .. ....+.++++.+ +++++++.. ++.|.+||..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~-~~------~~~~p~~i~~~~-~g~l~v~~~-~~~i~~~d~~ 95 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLP-FN------GLYQPQGLAVDG-AGTVYVTDF-NNRVVTLAAG 95 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECC-CC------SCCSCCCEEECT-TCCEEEEET-TTEEEEECTT
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEe-eC------CcCCcceeEECC-CCCEEEEcC-CCEEEEEeCC
Confidence 677899999999844 4 4 899999987654432211 10 011247899998 788666665 8899999986
Q ss_pred CCCCCceeEEec-ccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEec
Q psy6213 83 QISRSKQERVFN-DHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSE 161 (330)
Q Consensus 83 ~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 161 (330)
. .. ...+. .....+..+++.| +++++++...++.|.+|+..+.............+..+++++++. ++++...
T Consensus 96 ~---~~-~~~~~~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~ 169 (270)
T 1rwi_B 96 S---NN-QTVLPFDGLNYPEGLAVDT-QGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VYVTDTD 169 (270)
T ss_dssp C---SC-CEECCCCSCSSEEEEEECT-TCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-EEEEEGG
T ss_pred C---ce-EeeeecCCcCCCcceEECC-CCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-EEEEECC
Confidence 5 22 22222 2235688999998 778777777788999997654433322222334678899999997 6777777
Q ss_pred CCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeE
Q psy6213 162 NGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFH 241 (330)
Q Consensus 162 dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 241 (330)
++.|.+||.... ........+...+..++++++|.++++...++.|.+||................+..++++|+|+ +
T Consensus 170 ~~~i~~~~~~~~-~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l 247 (270)
T 1rwi_B 170 NNRVVKLEAESN-NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRT-V 247 (270)
T ss_dssp GTEEEEECTTTC-CEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCC-E
T ss_pred CCEEEEEecCCC-ceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCC-E
Confidence 889999998763 22222223336788999999998777777788999999876533322222335789999999998 5
Q ss_pred EEEeecccCCeEEEEEccCCC
Q psy6213 242 LASCSLVVDSSVNVWDIRRPY 262 (330)
Q Consensus 242 ~~~~~~~~~~~i~i~d~~~~~ 262 (330)
+++.. .++.|+++++...+
T Consensus 248 ~v~~~--~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 248 YVADR--GNDRVVKLTSLEHH 266 (270)
T ss_dssp EEEEG--GGTEEEEECCCGGG
T ss_pred EEEEC--CCCEEEEEcCCCcc
Confidence 66655 59999999987654
No 186
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.80 E-value=5.6e-16 Score=135.39 Aligned_cols=281 Identities=15% Similarity=0.141 Sum_probs=187.9
Q ss_pred cceEEEEeeCCCe-eecC-CCeEEEEEcC--Ccceeeeeceeeccccccccceeeeeec----ccCCcEEEEEcC-CCcE
Q psy6213 6 PVHKHGLKADNGL-AQPS-RNVFKIFLIK--DTEFVETHNLRVGKNINLNFSCNDVAWS----CIEENHIATGAT-NGAV 76 (330)
Q Consensus 6 ~v~~~~~s~~~~~-~~~g-d~~i~iw~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~~l~~~~~-dg~i 76 (330)
.+..+.|+|||++ ++++ ++.|.+||+. +.+....+.. +. ....++|+ | ++++++++.. ++.+
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~--G~------~P~~ia~s~~~~p-DGk~l~v~n~~~~~v 268 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI--GS------EARSIETSKMEGW-EDKYAIAGAYWPPQY 268 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC--CS------EEEEEEECCSTTC-TTTEEEEEEEETTEE
T ss_pred CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec--CC------CCceeEEccccCC-CCCEEEEEEccCCeE
Confidence 4678999999999 5555 9999999996 5555543332 11 13789999 7 8887777665 5899
Q ss_pred EEEECCCCCCCceeEEecc----------cc-cceeEEEEEecCCCEEEEEecCCcEEEEEeecCceee--eeecCCCCe
Q psy6213 77 VVWNLGQISRSKQERVFND----------HK-RTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTK--IFHSNTESV 143 (330)
Q Consensus 77 ~iw~~~~~~~~~~~~~~~~----------~~-~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~v 143 (330)
.++|..+ .+.+..+.. |. ..+..+..++.+..+++....+|.|.++|..+.+... .+. .....
T Consensus 269 ~ViD~~t---~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~ 344 (567)
T 1qks_A 269 VIMDGET---LEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFL 344 (567)
T ss_dssp EEEETTT---CCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSE
T ss_pred EEEECCC---CcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccc
Confidence 9999887 555554432 11 2577888887555566666778999999987654322 222 34567
Q ss_pred EEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeecc-----CCCCeEEEEEcCCCCEE-EEEe-cCCcEEEEeCCCC
Q psy6213 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA-----HSGPIFACDWHPEHAWL-ATAS-RDKTIKVWDLSIK 216 (330)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~-----~~~~i~~~~~~~~~~~l-~~~~-~dg~i~i~d~~~~ 216 (330)
..+.|+|++++++++...++.|.++|+.+ .+....+.. |.+.-..+ ++|++..+ +++. .++.|.++|....
T Consensus 345 ~d~~~~pdgr~~~va~~~sn~V~ViD~~t-~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~ 422 (567)
T 1qks_A 345 HDGGLDGSHRYFITAANARNKLVVIDTKE-GKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPE 422 (567)
T ss_dssp EEEEECTTSCEEEEEEGGGTEEEEEETTT-TEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTT
T ss_pred cCceECCCCCEEEEEeCCCCeEEEEECCC-CcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCC
Confidence 78999999998777777889999999998 444443332 43322222 57875544 4443 4689999998873
Q ss_pred -------ccccceeccccceEEEEEcCCCCeEEEEeeccc----CCeEEEEEccCC-----CccceEee--------cCC
Q psy6213 217 -------PSLEYSINTIASVSRIKWRPQRKFHLASCSLVV----DSSVNVWDIRRP-----YIPLASFT--------EHK 272 (330)
Q Consensus 217 -------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~----~~~i~i~d~~~~-----~~~~~~~~--------~~~ 272 (330)
+.+.........-..+..+|+++++.+...... .++|.++|+.+. ......+. ...
T Consensus 423 ~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 502 (567)
T 1qks_A 423 GHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQ 502 (567)
T ss_dssp TCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSC
T ss_pred CCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCC
Confidence 222222222233345778999999777652101 359999999876 32223332 123
Q ss_pred CCeEEEEEecCCCEEEEeec-----CCeEeeeec
Q psy6213 273 DVVSGLAWRGDPQLFIASSR-----VSIIPRAKN 301 (330)
Q Consensus 273 ~~v~~~~~~~~~~~l~s~~~-----dg~i~iw~~ 301 (330)
..+..+.|+|+|+.+..+.. ++.|.+++.
T Consensus 503 ~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~ 536 (567)
T 1qks_A 503 PRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDD 536 (567)
T ss_dssp CEEEEEEECTTSSEEEEEEECCTTSCCEEEEEET
T ss_pred cceEeeeECCCCCEEEEEeecCCCCCCcEEEEEC
Confidence 57899999999998887743 688999864
No 187
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.79 E-value=1.8e-17 Score=149.92 Aligned_cols=247 Identities=7% Similarity=0.034 Sum_probs=164.6
Q ss_pred CcccceEEEEeeCCCeee-----cC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCc
Q psy6213 3 YLSPVHKHGLKADNGLAQ-----PS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGA 75 (330)
Q Consensus 3 H~~~v~~~~~s~~~~~~~-----~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 75 (330)
|...+.+++|||||++++ .| +..|++||+++++........ . .. ...++|+| +++.|+.++.+..
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~--~---~~--~~~~~wsp-Dg~~l~~~~~d~~ 190 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIE--G---GK--YATPKWTP-DSKGFYYEWLPTD 190 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBS--C---CT--TCCCEECT-TSSEEEEEECCCC
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccC--c---cc--ccceEEec-CCCEEEEEEecCC
Confidence 555789999999999966 44 578999999998754111111 1 11 15789999 9999998888765
Q ss_pred -------------EEEEECCCCCCC-ceeEEecccccceeEEEEEecCCCEEEEEecCC----cEEEEEeecCceeeeee
Q psy6213 76 -------------VVVWNLGQISRS-KQERVFNDHKRTVNKVSFHYVESNWLISGSQDG----TMRLFDIRCQESTKIFH 137 (330)
Q Consensus 76 -------------i~iw~~~~~~~~-~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~ 137 (330)
|++|++.+.... ..+.....+...+..+.|+| ++++|+.++.++ .|++||..+++ ...+.
T Consensus 191 ~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~ 268 (695)
T 2bkl_A 191 PSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSR-DGKYLFVYILRGWSENDVYWKRPGEKD-FRLLV 268 (695)
T ss_dssp TTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECT-TSCCEEEEEEETTTEEEEEEECTTCSS-CEEEE
T ss_pred CCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECC-CCCEEEEEEeCCCCceEEEEEcCCCCc-eEEee
Confidence 999999873211 12223334556788999999 778777776665 67777655444 34444
Q ss_pred cCCCCeEEEEEcCCCCcEEEEEe---cCCcEEEEecCCCcc-ceeeeccC--CCCeEEEEEcCCCCEEEEEecCCcEEEE
Q psy6213 138 SNTESVRDVEFNPHSPYAFASVS---ENGTIQQWDVRRPEK-CFYQFTAH--SGPIFACDWHPEHAWLATASRDKTIKVW 211 (330)
Q Consensus 138 ~~~~~v~~~~~~~~~~~~~~~~~---~dg~i~i~d~~~~~~-~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 211 (330)
.+...+....+ +++. +++.+. .++.|.+||+.++.. ....+..+ ...+..++|+ ++.++++...|+..++|
T Consensus 269 ~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~ 345 (695)
T 2bkl_A 269 KGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVR 345 (695)
T ss_dssp ECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred cCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEE
Confidence 45555666666 6676 666665 357899999976432 12233333 4457888888 67788888999988888
Q ss_pred eCC-CCccccce-eccccceEEEEEcCCCCeEEEEee-cccCCeEEEEEccCCC
Q psy6213 212 DLS-IKPSLEYS-INTIASVSRIKWRPQRKFHLASCS-LVVDSSVNVWDIRRPY 262 (330)
Q Consensus 212 d~~-~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~-~~~~~~i~i~d~~~~~ 262 (330)
.+. .+...... ......+..+.++|+++.++.+.+ ....+.|++||+.+++
T Consensus 346 ~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 346 VATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp EEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 654 23222222 223566778889999987665553 1134789999998776
No 188
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.79 E-value=5.8e-17 Score=131.25 Aligned_cols=226 Identities=10% Similarity=0.001 Sum_probs=162.6
Q ss_pred eeeeeecccCCc-EEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCce
Q psy6213 54 CNDVAWSCIEEN-HIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQES 132 (330)
Q Consensus 54 v~~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (330)
..+++|+| +++ +++++..++.|..|+..+ . ...+..+...+.+++++| +++++++...++.|.+||..+++.
T Consensus 30 ~eg~~~d~-~g~~l~~~~~~~~~i~~~~~~~---~--~~~~~~~~~~~~~l~~~~-dg~l~v~~~~~~~i~~~d~~~g~~ 102 (296)
T 3e5z_A 30 TEGPVYVP-ARSAVIFSDVRQNRTWAWSDDG---Q--LSPEMHPSHHQNGHCLNK-QGHLIACSHGLRRLERQREPGGEW 102 (296)
T ss_dssp EEEEEEEG-GGTEEEEEEGGGTEEEEEETTS---C--EEEEESSCSSEEEEEECT-TCCEEEEETTTTEEEEECSTTCCE
T ss_pred ccCCeEeC-CCCEEEEEeCCCCEEEEEECCC---C--eEEEECCCCCcceeeECC-CCcEEEEecCCCeEEEEcCCCCcE
Confidence 37899999 776 788888899999999886 3 455566777899999998 888877777678999999977765
Q ss_pred eeeeecC----CCCeEEEEEcCCCCcEEEEE----e-------------cCCcEEEEecCCCccceeeeccCCCCeEEEE
Q psy6213 133 TKIFHSN----TESVRDVEFNPHSPYAFASV----S-------------ENGTIQQWDVRRPEKCFYQFTAHSGPIFACD 191 (330)
Q Consensus 133 ~~~~~~~----~~~v~~~~~~~~~~~~~~~~----~-------------~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~ 191 (330)
....... ...+..++++|+|. ++++. + ..+.|..++.. +. ...+..+......++
T Consensus 103 ~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--g~-~~~~~~~~~~~~gi~ 178 (296)
T 3e5z_A 103 ESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD--GT-LSAPIRDRVKPNGLA 178 (296)
T ss_dssp EEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT--SC-EEEEECCCSSEEEEE
T ss_pred EEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC--CC-EEEeecCCCCCccEE
Confidence 4333211 23467899999997 56652 2 13456666554 22 334445666788999
Q ss_pred EcCCCCEEEEEecCCcEEEEeCC-CCcc---ccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceE
Q psy6213 192 WHPEHAWLATASRDKTIKVWDLS-IKPS---LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLAS 267 (330)
Q Consensus 192 ~~~~~~~l~~~~~dg~i~i~d~~-~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~ 267 (330)
|+|+++.+++.+.++.|.+||+. .+.. ..........+..++++++|.. +++. ++.|.+||.. ++. +..
T Consensus 179 ~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l-~v~~----~~~v~~~~~~-g~~-~~~ 251 (296)
T 3e5z_A 179 FLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLI-WASA----GDGVHVLTPD-GDE-LGR 251 (296)
T ss_dssp ECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCE-EEEE----TTEEEEECTT-SCE-EEE
T ss_pred ECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCE-EEEc----CCeEEEECCC-CCE-EEE
Confidence 99999988777788999999986 3322 1111223445678999999984 4443 6789999986 443 566
Q ss_pred eecCCCCeEEEEE-ecCCCEEEEeecCCeEee
Q psy6213 268 FTEHKDVVSGLAW-RGDPQLFIASSRVSIIPR 298 (330)
Q Consensus 268 ~~~~~~~v~~~~~-~~~~~~l~s~~~dg~i~i 298 (330)
+..+.. +.+++| .|+++.|+.++.++..++
T Consensus 252 ~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~ 282 (296)
T 3e5z_A 252 VLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSI 282 (296)
T ss_dssp EECSSC-CCEEEEESTTSCEEEEEETTEEEEE
T ss_pred EECCCC-ceeEEEECCCCCEEEEEcCCeEEEE
Confidence 666666 999999 589999999888765444
No 189
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.79 E-value=9.4e-16 Score=133.95 Aligned_cols=274 Identities=12% Similarity=0.030 Sum_probs=189.6
Q ss_pred eCCCe-eecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECC--CCCCCce
Q psy6213 14 ADNGL-AQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLG--QISRSKQ 89 (330)
Q Consensus 14 ~~~~~-~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~--~~~~~~~ 89 (330)
|.+.+ ++.. ++.|.++|..+++....+.... .+..+.|+| +++++++++.++.|.+||+. + .+.
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~--------~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t---~~~ 232 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDTGY--------AVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKE---PTT 232 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEECSS--------CEEEEEECT-TSCEEEEEETTSEEEEEETTSSS---CCE
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeCCC--------CccceEECC-CCCEEEEEcCCCeEEEEECCCCC---CcE
Confidence 33444 4444 9999999999988776554321 246899999 99999999999999999995 4 455
Q ss_pred eEEecccccceeEEEEE----ecCCCEEEEEe-cCCcEEEEEeecCceeeeeecC-----------CCCeEEEEEcCCCC
Q psy6213 90 ERVFNDHKRTVNKVSFH----YVESNWLISGS-QDGTMRLFDIRCQESTKIFHSN-----------TESVRDVEFNPHSP 153 (330)
Q Consensus 90 ~~~~~~~~~~i~~i~~~----~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~-----------~~~v~~~~~~~~~~ 153 (330)
+..+... .....++|+ | +++++++++ .+++|.++|..+.+.+..+... ...+..+..+++++
T Consensus 233 v~~i~~G-~~P~~ia~s~~~~p-DGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~ 310 (567)
T 1qks_A 233 VAEIKIG-SEARSIETSKMEGW-EDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRP 310 (567)
T ss_dssp EEEEECC-SEEEEEEECCSTTC-TTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSS
T ss_pred eEEEecC-CCCceeEEccccCC-CCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCC
Confidence 5555543 346789999 6 777776655 4599999999998887776531 22578889999888
Q ss_pred cEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEe-cCCcEEEEeCCCCcccccee-----cccc
Q psy6213 154 YAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS-RDKTIKVWDLSIKPSLEYSI-----NTIA 227 (330)
Q Consensus 154 ~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~-----~~~~ 227 (330)
.+++....+|.|.++|....................+.|+|++++++++. .++.|.++|+.+++...... +|.+
T Consensus 311 ~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg 390 (567)
T 1qks_A 311 EFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPG 390 (567)
T ss_dssp EEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCT
T ss_pred EEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCc
Confidence 76777778899999998764322221122344577889999999887766 57889999999885432221 2222
Q ss_pred ceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCC------ccceEeecCCCCeEEEEEecCCCEEEEeec-------CC
Q psy6213 228 SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY------IPLASFTEHKDVVSGLAWRGDPQLFIASSR-------VS 294 (330)
Q Consensus 228 ~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~-------dg 294 (330)
.-.. -++|++..++++... .++.|.++|....+ ..+..+......-..+..+|++++|..... .+
T Consensus 391 ~g~~-~~~p~~g~v~~t~~~-g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~ 468 (567)
T 1qks_A 391 RGAN-FVHPTFGPVWATSHM-GDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISG 468 (567)
T ss_dssp TCEE-EEETTTEEEEEEEBS-SSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHT
T ss_pred ccee-eECCCCCcEEEeCCC-CCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCc
Confidence 1212 268886655655431 36899999998621 225666554444345778999999998663 35
Q ss_pred eEeeeeccc
Q psy6213 295 IIPRAKNIK 303 (330)
Q Consensus 295 ~i~iw~~~~ 303 (330)
.|.+++...
T Consensus 469 ~v~v~d~~~ 477 (567)
T 1qks_A 469 SVAVFDIKA 477 (567)
T ss_dssp CEEEEEGGG
T ss_pred eEEEEECCc
Confidence 899987543
No 190
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.79 E-value=2.3e-15 Score=121.88 Aligned_cols=275 Identities=8% Similarity=-0.031 Sum_probs=185.8
Q ss_pred cccceEEEEeeCCCe-eecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEEC
Q psy6213 4 LSPVHKHGLKADNGL-AQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNL 81 (330)
Q Consensus 4 ~~~v~~~~~s~~~~~-~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~ 81 (330)
...+.++++.++|++ ++.. ++.|.+|+.. ++... +.... ....+.++++.+ +++++++...++.|..+|.
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~-----~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~ 90 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-FEVPT-----PDAKVMCLIVSS-LGDIWFTENGANKIGKLSK 90 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-EECSS-----TTCCEEEEEECT-TSCEEEEETTTTEEEEECT
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-EECCC-----CCCcceeEEECC-CCCEEEEecCCCeEEEECC
Confidence 356789999999998 5554 8999999988 55443 22111 112358899998 8887777776788999987
Q ss_pred CCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeee-eecCCCCeEEEEEcCCCCcEEEEEe
Q psy6213 82 GQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKI-FHSNTESVRDVEFNPHSPYAFASVS 160 (330)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (330)
.. .............+.++++.+ +++++++...++.|..+|.. ++.... +......+..+++.+++. ++++..
T Consensus 91 ~g---~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~ 164 (300)
T 2qc5_A 91 KG---GFTEYPLPQPDSGPYGITEGL-NGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNA-LWFTEN 164 (300)
T ss_dssp TS---CEEEEECSSTTCCEEEEEECS-TTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSS-EEEEET
T ss_pred CC---CeEEecCCCCCCCCccceECC-CCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCC-EEEEec
Confidence 63 222222232346788999997 77877777667899999987 544322 222345789999999998 666666
Q ss_pred cCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcccccee-ccccceEEEEEcCCCC
Q psy6213 161 ENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI-NTIASVSRIKWRPQRK 239 (330)
Q Consensus 161 ~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~ 239 (330)
.++.|..+|. ++.........+...+..++++++|++.++....+.|.+||. ++....... .....+..++++++|.
T Consensus 165 ~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~ 242 (300)
T 2qc5_A 165 QNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSE 242 (300)
T ss_dssp TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTC
T ss_pred CCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCC
Confidence 6788999998 322222222234456889999999987777767778999998 332222211 2345688999999998
Q ss_pred eEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeee
Q psy6213 240 FHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAK 300 (330)
Q Consensus 240 ~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~ 300 (330)
. .++.. .++.|..||.. +.............+.+++++++|++.++.. . .|..++
T Consensus 243 l-~v~~~--~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~ 297 (300)
T 2qc5_A 243 I-WFTEW--GANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLN 297 (300)
T ss_dssp E-EEEET--TTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEE
T ss_pred E-EEecc--CCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeC
Confidence 4 55554 47999999984 4321222333345688999999998666654 4 555554
No 191
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.78 E-value=3.1e-16 Score=126.99 Aligned_cols=234 Identities=9% Similarity=0.002 Sum_probs=158.4
Q ss_pred cccceEEEEeeCCC-eeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEE
Q psy6213 4 LSPVHKHGLKADNG-LAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWN 80 (330)
Q Consensus 4 ~~~v~~~~~s~~~~-~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~ 80 (330)
.....+++|+|+|+ ++.++ ++.|..|+.+++ ...+..+. ..+.+++++| +++++++...++.|.+||
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~-------~~~~~l~~~~-dg~l~v~~~~~~~i~~~d 96 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPS-------HHQNGHCLNK-QGHLIACSHGLRRLERQR 96 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSC-------SSEEEEEECT-TCCEEEEETTTTEEEEEC
T ss_pred CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCC-------CCcceeeECC-CCcEEEEecCCCeEEEEc
Confidence 34567899999999 44444 899999999876 33332221 2258899999 888888877778999999
Q ss_pred CCCCCCCceeEEecc----cccceeEEEEEecCCCEEEEE----ec-------------CCcEEEEEeecCceeeeeecC
Q psy6213 81 LGQISRSKQERVFND----HKRTVNKVSFHYVESNWLISG----SQ-------------DGTMRLFDIRCQESTKIFHSN 139 (330)
Q Consensus 81 ~~~~~~~~~~~~~~~----~~~~i~~i~~~~~~~~~l~~~----~~-------------d~~i~i~d~~~~~~~~~~~~~ 139 (330)
..+ ++....... ....+..++++| +++++++. +. .+.|..++.. ++ ...+..+
T Consensus 97 ~~~---g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~ 170 (296)
T 3e5z_A 97 EPG---GEWESIADSFEGKKLNSPNDVCLAP-DGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRD 170 (296)
T ss_dssp STT---CCEEEEECEETTEECCCCCCEEECT-TSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECC
T ss_pred CCC---CcEEEEeeccCCCCCCCCCCEEECC-CCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecC
Confidence 866 333222221 123467899998 88888873 21 2355555544 33 3444455
Q ss_pred CCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccc---eeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCC
Q psy6213 140 TESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC---FYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIK 216 (330)
Q Consensus 140 ~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 216 (330)
......++|+|+++. +++.+.++.|++||+...+.. ...+..+...+..++++++|++.++. ++.|.+||.. +
T Consensus 171 ~~~~~gi~~s~dg~~-lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g 246 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNL-LVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-G 246 (296)
T ss_dssp CSSEEEEEECTTSCE-EEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-S
T ss_pred CCCCccEEECCCCCE-EEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-C
Confidence 667889999999995 577777899999998732332 22333355667889999999866665 7899999987 4
Q ss_pred ccccceeccccceEEEEE-cCCCCeEEEEeecccCCeEEEEEccCCC
Q psy6213 217 PSLEYSINTIASVSRIKW-RPQRKFHLASCSLVVDSSVNVWDIRRPY 262 (330)
Q Consensus 217 ~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~~~~~~~~i~i~d~~~~~ 262 (330)
+.......+.. +.+++| .|+++.|+++. .+.+.-++..+..
T Consensus 247 ~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t----~~~l~~~~~~~~~ 288 (296)
T 3e5z_A 247 DELGRVLTPQT-TSNLCFGGPEGRTLYMTV----STEFWSIETNVRG 288 (296)
T ss_dssp CEEEEEECSSC-CCEEEEESTTSCEEEEEE----TTEEEEEECSCCB
T ss_pred CEEEEEECCCC-ceeEEEECCCCCEEEEEc----CCeEEEEEccccc
Confidence 34333333344 889999 68988766654 4556666666554
No 192
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.77 E-value=2.7e-16 Score=130.22 Aligned_cols=232 Identities=5% Similarity=0.005 Sum_probs=149.8
Q ss_pred cceEEEEeeCCCeeecC--C---Ce--EEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCC-----
Q psy6213 6 PVHKHGLKADNGLAQPS--R---NV--FKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATN----- 73 (330)
Q Consensus 6 ~v~~~~~s~~~~~~~~g--d---~~--i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----- 73 (330)
.+..++|+|||++++.. + +. |.+|++.+++.......+ . +..++|+| +++.|+.++.+
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~--------~-~~~~~wsp-dg~~l~~~~~~~~~~~ 129 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK--------N-IRSLEWNE-DSRKLLIVGFKRREDE 129 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES--------E-EEEEEECT-TSSEEEEEEECCCC--
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC--------C-ccceeECC-CCCEEEEEEccCCCcC
Confidence 46789999999984443 2 44 777788777654433221 1 48899999 88888877632
Q ss_pred ----------------------CcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCC-------cEEE
Q psy6213 74 ----------------------GAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDG-------TMRL 124 (330)
Q Consensus 74 ----------------------g~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~-------~i~i 124 (330)
..|.+||+.+ ++....+.. . .+..+.|+| ++ +++++..++ ...+
T Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~---~~~~~~l~~-~-~~~~~~~sp-dg-~~~~~~~~~~~~~~~~~~~l 202 (347)
T 2gop_A 130 DFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES---EEVIEEFEK-P-RFSSGIWHR-DK-IVVNVPHREIIPQYFKFWDI 202 (347)
T ss_dssp -------CCCC---------CEEEEEEEETTT---TEEEEEEEE-E-TTCEEEEET-TE-EEEEEECCCSSCCSSCCEEE
T ss_pred CcEEEcccceeecCcccccCccceEEEEECCC---CeEEeeecC-C-CcccccCCC-Ce-EEEEEecccccccccccccE
Confidence 5688999876 444233433 3 788999998 67 777776542 4455
Q ss_pred EEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecC-------CcEEEEecCCCccceeeeccCCCCeEE-EEEcCCC
Q psy6213 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSEN-------GTIQQWDVRRPEKCFYQFTAHSGPIFA-CDWHPEH 196 (330)
Q Consensus 125 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~i~~-~~~~~~~ 196 (330)
|.+.+++. ..+..+ ..+..+ +|+|+++++.+..+ ..|.+|| + ++.......+...+.. +.|+ ++
T Consensus 203 ~~~d~~~~-~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~-~~~~~l~~~~~~~~~~~~~~s-dg 274 (347)
T 2gop_A 203 YIWEDGKE-EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--G-KEVMGILDEVDRGVGQAKIKD-GK 274 (347)
T ss_dssp EEEETTEE-EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--S-SCEEESSTTCCSEEEEEEEET-TE
T ss_pred EEeCCCce-EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--C-CceEeccccCCcccCCccEEc-Cc
Confidence 55554543 333333 445544 99999644444332 4688888 3 4444444556677886 8999 88
Q ss_pred CEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeE-EEEEccCCCccceEeecCCC
Q psy6213 197 AWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSV-NVWDIRRPYIPLASFTEHKD 273 (330)
Q Consensus 197 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i-~i~d~~~~~~~~~~~~~~~~ 273 (330)
++++++.++.+++| +.++ ...........+..++|+| ..+++..+ ++.. .+|.+. ++ ...+..|..
T Consensus 275 -~~~~~~~~~~~~l~-~~~g-~~~~~~~~~~~v~~~~~s~--~~~~~~~~---~~~~~~l~~~~-g~--~~~lt~~n~ 341 (347)
T 2gop_A 275 -VYFTLFEEGSVNLY-IWDG-EIKPIAKGRHWIMGFDVDE--IVVYLKET---ATRLRELFTWD-GE--EKQLTDYND 341 (347)
T ss_dssp -EEEEEEETTEEEEE-EESS-SEEEEECSSSEEEEEEESS--SEEEEEEC---SSSCCEEEEES-SS--EEECCCTTS
T ss_pred -EEEEEecCCcEEEE-EcCC-ceEEEecCCCeEEeeeeeC--cEEEEEcC---CCChHHheEeC-Cc--EEEeccccH
Confidence 88999999999999 8744 3334444567899999999 44344443 4443 666665 33 344555543
No 193
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.77 E-value=1.6e-16 Score=143.73 Aligned_cols=275 Identities=9% Similarity=-0.006 Sum_probs=170.4
Q ss_pred EeeCCCeeecC--CC---eEEEEE--cCCcceeeeeceeeccccccccceeeeeecccCCcEEE-----EEcCCCcEEEE
Q psy6213 12 LKADNGLAQPS--RN---VFKIFL--IKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIA-----TGATNGAVVVW 79 (330)
Q Consensus 12 ~s~~~~~~~~g--d~---~i~iw~--~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~-----~~~~dg~i~iw 79 (330)
.+|+|++++.. ++ .-.+|- ...++....+.... ........+..++||| ++++|| .|+.+..|++|
T Consensus 75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~-~a~~~~~~~~~~~~SP-DG~~la~~~~~~G~~~~~i~v~ 152 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNG-WSKDGTVSLGTWAVSW-DGKKVAFAQKPNAADEAVLHVI 152 (695)
T ss_dssp CEEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGG-SSSSSCEEEEEEEECT-TSSEEEEEEEETTCSCCEEEEE
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHH-hccCCCEEEEEEEECC-CCCEEEEEECCCCCceEEEEEE
Confidence 35889884333 22 344454 43444322222111 1111234578999999 999888 34445689999
Q ss_pred ECCCCCCCceeEEecccccce--eEEEEEecCCCEEEEEecCCc-------------EEEEEeecCce--eeee--ecCC
Q psy6213 80 NLGQISRSKQERVFNDHKRTV--NKVSFHYVESNWLISGSQDGT-------------MRLFDIRCQES--TKIF--HSNT 140 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i--~~i~~~~~~~~~l~~~~~d~~-------------i~i~d~~~~~~--~~~~--~~~~ 140 (330)
|+.+ ++... ..+...+ ..++|+| +++.|+.++.|.. |++|++.+++. ...+ ..+.
T Consensus 153 dl~t---g~~~~--~~~~~~~~~~~~~wsp-Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~ 226 (695)
T 2bkl_A 153 DVDS---GEWSK--VDVIEGGKYATPKWTP-DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDP 226 (695)
T ss_dssp ETTT---CCBCS--SCCBSCCTTCCCEECT-TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCT
T ss_pred ECCC---CCCcC--CcccCcccccceEEec-CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCC
Confidence 9988 33320 1111222 6899998 8888998888765 99999987763 2223 2344
Q ss_pred CCeEEEEEcCCCCcEEEEEecC-C--cEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEe---cCCcEEEEeCC
Q psy6213 141 ESVRDVEFNPHSPYAFASVSEN-G--TIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS---RDKTIKVWDLS 214 (330)
Q Consensus 141 ~~v~~~~~~~~~~~~~~~~~~d-g--~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~---~dg~i~i~d~~ 214 (330)
..+..+.|+|+|++++++...+ + .|+++|..+ + ....+..+...+....+ ++|.+++.+. .++.|.+||+.
T Consensus 227 ~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~-~-~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~ 303 (695)
T 2bkl_A 227 TTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGE-K-DFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPA 303 (695)
T ss_dssp TCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTC-S-SCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTT
T ss_pred EEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCC-C-ceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCC
Confidence 5788999999999755554443 2 566676543 2 34455555666666666 5666444433 25789999998
Q ss_pred CCcc--ccceecc--ccceEEEEEcCCCCeEEEEeecccCCeEEEEEcc-CCCccceEeecC-CCCeEEEEEecCCCEEE
Q psy6213 215 IKPS--LEYSINT--IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIR-RPYIPLASFTEH-KDVVSGLAWRGDPQLFI 288 (330)
Q Consensus 215 ~~~~--~~~~~~~--~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~-~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~ 288 (330)
++.. ......+ ...+..++|+ ++. ++++.. .++..++|.+. .+.. ...+..+ .+.+..++++|++..++
T Consensus 304 ~~~~~~~~~l~~~~~~~~l~~~~~~-~~~-lv~~~~--~dg~~~l~~~~~~g~~-~~~l~~~~~~~v~~~~~s~d~~~l~ 378 (695)
T 2bkl_A 304 KPARASWKEIVPEDSSASLLSVSIV-GGH-LSLEYL--KDATSEVRVATLKGKP-VRTVQLPGVGAASNLMGLEDLDDAY 378 (695)
T ss_dssp BCSGGGCEEEECCCSSCEEEEEEEE-TTE-EEEEEE--ETTEEEEEEEETTCCE-EEECCCSSSSEECCCBSCTTCSEEE
T ss_pred CCCccCCeEEecCCCCCeEEEEEEE-CCE-EEEEEE--ECCEEEEEEEeCCCCe-eEEecCCCCeEEEEeecCCCCCEEE
Confidence 7642 1233332 4467888888 444 566666 68888888665 2333 4445544 56788889999998777
Q ss_pred Ee----ecCCeEeeeecc
Q psy6213 289 AS----SRVSIIPRAKNI 302 (330)
Q Consensus 289 s~----~~dg~i~iw~~~ 302 (330)
.. ...+.|++|+..
T Consensus 379 ~~~ss~~~P~~v~~~d~~ 396 (695)
T 2bkl_A 379 YVFTSFTTPRQIYKTSVS 396 (695)
T ss_dssp EEEEETTEEEEEEEEETT
T ss_pred EEEcCCCCCCEEEEEECC
Confidence 33 345789998753
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.77 E-value=1.4e-15 Score=124.78 Aligned_cols=249 Identities=7% Similarity=-0.030 Sum_probs=171.1
Q ss_pred ceEEEEeeCCCe-eecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCC
Q psy6213 7 VHKHGLKADNGL-AQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQI 84 (330)
Q Consensus 7 v~~~~~s~~~~~-~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 84 (330)
...+.+.. +++ ++.. ++.|.+||.++++....+.. . ..+..+++++ ++..+++...++.|.+||..+
T Consensus 46 ~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~~--~------~~p~~i~~~~-~g~lyv~~~~~~~v~~iD~~t- 114 (328)
T 3dsm_A 46 AQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRITG--F------TSPRYIHFLS-DEKAYVTQIWDYRIFIINPKT- 114 (328)
T ss_dssp EEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEEC--C------SSEEEEEEEE-TTEEEEEEBSCSEEEEEETTT-
T ss_pred ceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcCC--C------CCCcEEEEeC-CCeEEEEECCCCeEEEEECCC-
Confidence 46677743 444 5555 89999999999887766521 1 1247899988 775545544789999999987
Q ss_pred CCCceeEEecccc-----cceeEEEEEecCCCEEEEEe-cCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEE
Q psy6213 85 SRSKQERVFNDHK-----RTVNKVSFHYVESNWLISGS-QDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFAS 158 (330)
Q Consensus 85 ~~~~~~~~~~~~~-----~~i~~i~~~~~~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 158 (330)
.+....+.... .....+++ . ++.++++.. .++.|.++|+.+++.+..+... .....++++|+++ ++++
T Consensus 115 --~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~dG~-l~v~ 188 (328)
T 3dsm_A 115 --YEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKYNK-MWTI 188 (328)
T ss_dssp --TEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTTSE-EEEE
T ss_pred --CeEEEEEEcCCccccCCCcceEEE-E-CCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCCCC-EEEE
Confidence 55554444322 14566777 3 555555544 4889999999999888777643 3457889999997 5665
Q ss_pred EecC----------CcEEEEecCCCccceeeeccC-CCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccce-ecc-
Q psy6213 159 VSEN----------GTIQQWDVRRPEKCFYQFTAH-SGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYS-INT- 225 (330)
Q Consensus 159 ~~~d----------g~i~i~d~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~~~- 225 (330)
+..+ +.|.++|..+ .+....+... ......++++|+++.|+++.. .|.+||..+++..... ...
T Consensus 189 ~~~~~~~~~~~~~~~~v~~id~~t-~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~ 265 (328)
T 3dsm_A 189 TDGGYEGSPYGYEAPSLYRIDAET-FTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFR 265 (328)
T ss_dssp BCCBCTTCSSCBCCCEEEEEETTT-TEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCC
T ss_pred ECCCccCCccccCCceEEEEECCC-CeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCC
Confidence 5544 7899999987 4444444322 246889999999998888765 8999999887543211 121
Q ss_pred ccceEEEEEcCCCCeEEEEe----ecccCCeEEEEEccCCCccceEeecCCCCeEEEEE
Q psy6213 226 IASVSRIKWRPQRKFHLASC----SLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAW 280 (330)
Q Consensus 226 ~~~v~~~~~~~~~~~l~~~~----~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 280 (330)
......++++|++..++++. . .++.|.+||.. ++. +..+.. ......++|
T Consensus 266 ~~~p~gi~vdp~~g~lyva~~~~y~--~~~~V~v~d~~-g~~-~~~i~~-G~~P~~~~~ 319 (328)
T 3dsm_A 266 DTKYYGLTVNPNNGEVYVADAIDYQ--QQGIVYRYSPQ-GKL-IDEFYV-GIIPGAFCW 319 (328)
T ss_dssp SSCEEEEEECTTTCCEEEEECTTSS--SEEEEEEECTT-CCE-EEEEEE-EESEEEEEE
T ss_pred CCceEEEEEcCCCCeEEEEcccccc--cCCEEEEECCC-CCE-EEEEEe-ccCcceEEE
Confidence 46788999999666667776 4 58999999998 654 555542 233455555
No 195
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.76 E-value=1.5e-15 Score=121.22 Aligned_cols=213 Identities=9% Similarity=0.029 Sum_probs=160.1
Q ss_pred CCcEEEEEcCCCcEEEEECCCCCCCceeEEecccc-cceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCC-
Q psy6213 63 EENHIATGATNGAVVVWNLGQISRSKQERVFNDHK-RTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNT- 140 (330)
Q Consensus 63 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~-~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~- 140 (330)
.+++|++++.++.|.+||.++ ++.+..+..+. ..+.++.+.| ++++++ +.++.|+.||. +++.+..+..+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~t---G~~~w~~~~~~~~~~~~~~~~p-dG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~ 76 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDT---KEIVWEYPLEKGWECNSVAATK-AGEILF--SYSKGAKMITR-DGRELWNIAAPAG 76 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTT---TEEEEEEECCTTCCCCEEEECT-TSCEEE--ECBSEEEEECT-TSCEEEEEECCTT
T ss_pred CCcEEEeeCCCCEEEEEECCC---CeEEEEeCCCccCCCcCeEECC-CCCEEE--eCCCCEEEECC-CCCEEEEEcCCCC
Confidence 478999999999999999977 77777777665 4788999998 888888 34778999999 799888888643
Q ss_pred CCeEEEEEcCCCCcEEEEEec-CCcEEEEecCCCccceeeec------cCCCCeEEEEEcCCCCEEEEEecCCcEEEEeC
Q psy6213 141 ESVRDVEFNPHSPYAFASVSE-NGTIQQWDVRRPEKCFYQFT------AHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213 (330)
Q Consensus 141 ~~v~~~~~~~~~~~~~~~~~~-dg~i~i~d~~~~~~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 213 (330)
..+.++.+.++++ ++++.+. ++.+..+|.. ++.+..+. .+......+++.++|+++++...++.|..||.
T Consensus 77 ~~~~~~~~~~dG~-~lv~~~~~~~~v~~vd~~--Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~ 153 (276)
T 3no2_A 77 CEMQTARILPDGN-ALVAWCGHPSTILEVNMK--GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAP 153 (276)
T ss_dssp CEEEEEEECTTSC-EEEEEESTTEEEEEECTT--SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECT
T ss_pred ccccccEECCCCC-EEEEecCCCCEEEEEeCC--CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECC
Confidence 4788999999998 5666665 6777777753 44444433 12234556788999999999999999999998
Q ss_pred CCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCC------CCeEEEEEecCCCEE
Q psy6213 214 SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHK------DVVSGLAWRGDPQLF 287 (330)
Q Consensus 214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~------~~v~~~~~~~~~~~l 287 (330)
. ++.+..... ...+..+...+++..+++.. .++.|..+|..+++. +-.+..+. ..+.+++..++|+++
T Consensus 154 ~-G~~~w~~~~-~~~~~~~~~~~~g~~~v~~~---~~~~v~~~d~~tG~~-~w~~~~~~~~~~~l~~~~~~~~~~~G~i~ 227 (276)
T 3no2_A 154 N-GQLLNSVKL-SGTPFSSAFLDNGDCLVACG---DAHCFVQLNLESNRI-VRRVNANDIEGVQLFFVAQLFPLQNGGLY 227 (276)
T ss_dssp T-SCEEEEEEC-SSCCCEEEECTTSCEEEECB---TTSEEEEECTTTCCE-EEEEEGGGSBSCCCSEEEEEEECTTSCEE
T ss_pred C-CCEEEEEEC-CCCccceeEcCCCCEEEEeC---CCCeEEEEeCcCCcE-EEEecCCCCCCccccccccceEcCCCCEE
Confidence 8 645443332 34566678889999755554 477999999998876 55554332 237888889999988
Q ss_pred EEee
Q psy6213 288 IASS 291 (330)
Q Consensus 288 ~s~~ 291 (330)
++..
T Consensus 228 v~~~ 231 (276)
T 3no2_A 228 ICNW 231 (276)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8874
No 196
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.75 E-value=1.1e-14 Score=117.86 Aligned_cols=235 Identities=8% Similarity=-0.007 Sum_probs=165.3
Q ss_pred eeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCcee
Q psy6213 54 CNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQEST 133 (330)
Q Consensus 54 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (330)
+.++++.+ +++++++...++.|..||... .............+.++++.+ ++.++++...++.|..||.. ++.
T Consensus 17 ~~~i~~d~-~g~l~v~~~~~~~v~~~d~~~---~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~~-g~~- 89 (299)
T 2z2n_A 17 PYGITVSD-KGKVWITQHKANMISCINLDG---KITEYPLPTPDAKVMCLTISS-DGEVWFTENAANKIGRITKK-GII- 89 (299)
T ss_dssp EEEEEECT-TSCEEEEETTTTEEEEECTTC---CEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCE-
T ss_pred ccceEECC-CCCEEEEecCCCcEEEEcCCC---CeEEecCCcccCceeeEEECC-CCCEEEeCCCCCeEEEECCC-CcE-
Confidence 58899998 888777776678999999762 212122223456788999997 77877777768889999976 332
Q ss_pred eeee--cCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEE
Q psy6213 134 KIFH--SNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVW 211 (330)
Q Consensus 134 ~~~~--~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 211 (330)
..+. .....+..+++.+++. ++++...++.|..||. ++.............+..+++.++|+++++...++.|..|
T Consensus 90 ~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~ 167 (299)
T 2z2n_A 90 KEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRI 167 (299)
T ss_dssp EEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred EEEeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEE
Confidence 2232 2345789999999887 6776667889999998 4232222223345678999999999888777777899999
Q ss_pred eCCCCccccc-eeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEe
Q psy6213 212 DLSIKPSLEY-SINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIAS 290 (330)
Q Consensus 212 d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 290 (330)
|. +++.... .......+..+++++++.. +++.. .++.|..||. ++.........+...+.+++++++|++.++.
T Consensus 168 ~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l-~v~~~--~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 168 TE-SGDITEFKIPTPASGPVGITKGNDDAL-WFVEI--IGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp CT-TCCEEEEECSSTTCCEEEEEECTTSSE-EEEET--TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred cC-CCcEEEeeCCCCCCcceeEEECCCCCE-EEEcc--CCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEec
Confidence 98 5433222 1123456889999999985 55544 4789999999 5543222233345678999999999977776
Q ss_pred ecCCeEeeeecc
Q psy6213 291 SRVSIIPRAKNI 302 (330)
Q Consensus 291 ~~dg~i~iw~~~ 302 (330)
..++.|..|+..
T Consensus 243 ~~~~~i~~~d~~ 254 (299)
T 2z2n_A 243 WGANKIGRLTSN 254 (299)
T ss_dssp TTTTEEEEEETT
T ss_pred cCCceEEEECCC
Confidence 678889999864
No 197
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.74 E-value=5.5e-15 Score=120.55 Aligned_cols=243 Identities=10% Similarity=0.100 Sum_probs=162.5
Q ss_pred ccceEEEEeeCCCeeec--------C-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccC-CcEEEEEcCCC
Q psy6213 5 SPVHKHGLKADNGLAQP--------S-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIE-ENHIATGATNG 74 (330)
Q Consensus 5 ~~v~~~~~s~~~~~~~~--------g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg 74 (330)
....+++|+++|.++++ . ++.|.+|+..+++...... . ........+.++++++ + ++++++.. .+
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-~--~~~~~~~~~~~i~~~~-~~g~l~v~~~-~~ 92 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK-P--EVNGYGGIPAGCQCDR-DANQLFVADM-RL 92 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC-C--EETTEECCEEEEEECS-SSSEEEEEET-TT
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe-c--ccCCCCCCCceEEEec-CCCcEEEEEC-CC
Confidence 34678999999998555 4 8999999988877543221 0 0001112358899998 6 66555544 44
Q ss_pred cEEEEECCCCCCCceeEE-ec----ccccceeEEEEEecCCCEEEEEecC---------------CcEEEEEeecCceee
Q psy6213 75 AVVVWNLGQISRSKQERV-FN----DHKRTVNKVSFHYVESNWLISGSQD---------------GTMRLFDIRCQESTK 134 (330)
Q Consensus 75 ~i~iw~~~~~~~~~~~~~-~~----~~~~~i~~i~~~~~~~~~l~~~~~d---------------~~i~i~d~~~~~~~~ 134 (330)
.|.+||.+ . +.... .. .....+.++++.+ +++++++...+ +.|..||.. ++...
T Consensus 93 ~l~~~d~~-g---~~~~~~~~~~~~~~~~~~~~i~~d~-~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~ 166 (314)
T 1pjx_A 93 GLLVVQTD-G---TFEEIAKKDSEGRRMQGCNDCAFDY-EGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ 166 (314)
T ss_dssp EEEEEETT-S---CEEECCSBCTTSCBCBCCCEEEECT-TSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE
T ss_pred CEEEEeCC-C---CEEEEEeccCCCccccCCcCEEECC-CCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE
Confidence 78889876 2 12111 11 1124588999998 77877776554 467777755 44333
Q ss_pred eeecCCCCeEEEEEc----CCCCcEEEEEecCCcEEEEecCCCcc-----ceeeeccCC-CCeEEEEEcCCCCEEEEEec
Q psy6213 135 IFHSNTESVRDVEFN----PHSPYAFASVSENGTIQQWDVRRPEK-----CFYQFTAHS-GPIFACDWHPEHAWLATASR 204 (330)
Q Consensus 135 ~~~~~~~~v~~~~~~----~~~~~~~~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~-~~i~~~~~~~~~~~l~~~~~ 204 (330)
.. .+......++++ |+++.++++...++.|.+||+...+. ....+..+. ..+..++++++|+++++...
T Consensus 167 ~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 167 VD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp EE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET
T ss_pred ec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC
Confidence 22 233456889999 99875566666788999999862122 222333333 56788999999998888878
Q ss_pred CCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCC
Q psy6213 205 DKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRP 261 (330)
Q Consensus 205 dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~ 261 (330)
++.|.+||..+++.......+...+.+++|+|+++.|+++.. .++.|..|++...
T Consensus 246 ~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~--~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 246 SSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEH--ENNAVWKFEWQRN 300 (314)
T ss_dssp TTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEET--TTTEEEEEECSSC
T ss_pred CCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeC--CCCeEEEEeCCCC
Confidence 899999998866444433334467899999999997676665 5789999998754
No 198
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.73 E-value=5.2e-14 Score=117.17 Aligned_cols=268 Identities=10% Similarity=-0.060 Sum_probs=177.5
Q ss_pred EeeCCCeeecCC----C---eEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEc----------CCC
Q psy6213 12 LKADNGLAQPSR----N---VFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGA----------TNG 74 (330)
Q Consensus 12 ~s~~~~~~~~gd----~---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~----------~dg 74 (330)
..|+++++...+ . .|.++|..+++....+.. + .. ..++++| +++.++++. .++
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~--g------~~-p~i~~sp-Dg~~lyv~n~~~~~~~rg~~~~ 97 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG--G------FL-PNPVAAH-SGSEFALASTSFSRIAKGKRTD 97 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecC--C------CC-CCeEECC-CCCEEEEEeccccccccCCCCC
Confidence 447777632222 1 889999998886644332 2 11 3799999 999888875 357
Q ss_pred cEEEEECCCCCCCceeEEeccc-------ccceeEEEEEecCCCEEEEEec--CCcEEEEEeecCceeee-eecCCCCeE
Q psy6213 75 AVVVWNLGQISRSKQERVFNDH-------KRTVNKVSFHYVESNWLISGSQ--DGTMRLFDIRCQESTKI-FHSNTESVR 144 (330)
Q Consensus 75 ~i~iw~~~~~~~~~~~~~~~~~-------~~~i~~i~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~-~~~~~~~v~ 144 (330)
.|.+||..+ .+....+... ......+.|+| ++++|+++.. ++.|.++| .+++.+.. +....
T Consensus 98 ~v~viD~~t---~~~~~~i~~~~~~~~~~g~~p~~~~~sp-DG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~---- 168 (373)
T 2mad_H 98 YVEVFDPVT---FLPIADIELPDAPRFDVGPYSWMNANTP-NNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT---- 168 (373)
T ss_pred eEEEEECCC---CcEEEEEECCCccccccCCCccceEECC-CCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc----
Confidence 899999987 4444443321 12345889999 8888888764 57899999 99988777 54322
Q ss_pred EEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeec-----cCCCCe-EEEEEcCCCCEEEEEecCCcEEEEeCCCCcc
Q psy6213 145 DVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFT-----AHSGPI-FACDWHPEHAWLATASRDKTIKVWDLSIKPS 218 (330)
Q Consensus 145 ~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~-----~~~~~i-~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 218 (330)
++.+.|+++..+++.+.||.+.++|. + .+...... ....++ ....+.+++..++..+.++.+.+.|+.....
T Consensus 169 ~~~~~~~~~~~~~~~~~dg~~~~vd~-~-g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~ 246 (373)
T 2mad_H 169 CYHIHPGAPSTFYLLCAQGGLAKTDH-A-GGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGA 246 (373)
T ss_pred eEEEEeCCCceEEEEcCCCCEEEEEC-C-CcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcc
Confidence 35566777767888889999999999 6 33332111 112221 2345666665555555778999999875422
Q ss_pred cc-ceec-----------cccceEEEEEcCCCCeEEEEeecc-------cCCeEEEEEccCCCccceEeecCCCCeEEEE
Q psy6213 219 LE-YSIN-----------TIASVSRIKWRPQRKFHLASCSLV-------VDSSVNVWDIRRPYIPLASFTEHKDVVSGLA 279 (330)
Q Consensus 219 ~~-~~~~-----------~~~~v~~~~~~~~~~~l~~~~~~~-------~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~ 279 (330)
.. .... .......+.++|+++.++++.... ..+.|.++|+.+.+. +..+.. .....+++
T Consensus 247 ~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v-v~~i~~-g~~p~~i~ 324 (373)
T 2mad_H 247 TNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT-SSQISL-GHDVDAIS 324 (373)
T ss_pred eEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEE-EEEEEC-CCCcCeEE
Confidence 11 1110 122344578999999877765310 136899999998875 555543 34689999
Q ss_pred EecCCC-EEEEee-cCCeEeeeecc
Q psy6213 280 WRGDPQ-LFIASS-RVSIIPRAKNI 302 (330)
Q Consensus 280 ~~~~~~-~l~s~~-~dg~i~iw~~~ 302 (330)
|+|||+ .++++. .++.|.+++..
T Consensus 325 ~s~Dg~~~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 325 VAQDGGPDLYALSAGTEVLHIYDAG 349 (373)
T ss_pred ECCCCCeEEEEEcCCCCeEEEEECC
Confidence 999999 788777 58999999754
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.72 E-value=5.6e-15 Score=134.55 Aligned_cols=238 Identities=13% Similarity=0.042 Sum_probs=154.1
Q ss_pred cceeeeeecccCCcEEEEEcCC-----CcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCc-----
Q psy6213 52 FSCNDVAWSCIEENHIATGATN-----GAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGT----- 121 (330)
Q Consensus 52 ~~v~~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~----- 121 (330)
..+..++||| ++++||.+..+ ..|++||+.+ ++.... ..+...+..++|+| + +.|+.++.++.
T Consensus 163 ~~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~t---g~~~~~-~~~~~~~~~~~wsp-D-~~l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 163 TALDAWAASD-DGRLLAYSVQDGGSDWRTVKFVGVAD---GKPLAD-ELKWVKFSGLAWLG-N-DALLYSRFAEPKEGQA 235 (741)
T ss_dssp EEEEEEEECT-TSSEEEEEEEETTCSEEEEEEEETTT---CCEEEE-EEEEEESCCCEEST-T-SEEEEEECCCC-----
T ss_pred EEEEeEEECC-CCCEEEEEEcCCCCceEEEEEEECCC---CCCCCc-cCCCceeccEEEEC-C-CEEEEEEecCcccccc
Confidence 3468899999 99988877543 3599999988 443332 11222346789999 6 77877776554
Q ss_pred ---------EEEEEeecCce--eeeeec--CCCCeEEEEEcCCCCcEEEEEec----CCcEEEEecCCCccc-eeeeccC
Q psy6213 122 ---------MRLFDIRCQES--TKIFHS--NTESVRDVEFNPHSPYAFASVSE----NGTIQQWDVRRPEKC-FYQFTAH 183 (330)
Q Consensus 122 ---------i~i~d~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~----dg~i~i~d~~~~~~~-~~~~~~~ 183 (330)
|++|++.+++. ...+.. +...+..+.|+|+|+++++++.. ...|++||+.++... ...+..+
T Consensus 236 ~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 315 (741)
T 1yr2_A 236 FQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD 315 (741)
T ss_dssp ---CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS
T ss_pred cccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC
Confidence 88999876653 223332 22358899999999965554432 347999999874222 4455555
Q ss_pred CCCeEEEEEcCCCCEEEEEecC----CcEEEEeCCCCc-ccccee-ccccceEEEEEcCCCCeEEEEeecccCCeEEEEE
Q psy6213 184 SGPIFACDWHPEHAWLATASRD----KTIKVWDLSIKP-SLEYSI-NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWD 257 (330)
Q Consensus 184 ~~~i~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~-~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d 257 (330)
........ +|+|+.|+..+.+ +.|.+||+.++. ...... .+...+..+.++ +..++++.. .++..++|.
T Consensus 316 ~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~--~dg~~~l~~ 390 (741)
T 1yr2_A 316 LKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA--GNRLFASYI--HDAKSQVLA 390 (741)
T ss_dssp SSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE--BTEEEEEEE--ETTEEEEEE
T ss_pred CCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE--CCEEEEEEE--ECCEEEEEE
Confidence 55555553 4888888887754 459999988742 222222 233456677777 344666666 588877776
Q ss_pred cc-CCCccceEeec-CCCCeEEEEEecCCCEEEEe----ecCCeEeeeecc
Q psy6213 258 IR-RPYIPLASFTE-HKDVVSGLAWRGDPQLFIAS----SRVSIIPRAKNI 302 (330)
Q Consensus 258 ~~-~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~s~----~~dg~i~iw~~~ 302 (330)
+. .+.. ...+.. +.+.+..++++|+++.|+.. ...+.|++|+..
T Consensus 391 ~~~~g~~-~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~ 440 (741)
T 1yr2_A 391 FDLDGKP-AGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPA 440 (741)
T ss_dssp EETTSCE-EEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETT
T ss_pred EeCCCCc-eeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECC
Confidence 55 2333 444543 35678899999998866633 334788888753
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.71 E-value=1.3e-14 Score=132.11 Aligned_cols=244 Identities=14% Similarity=0.143 Sum_probs=158.2
Q ss_pred ccceEEEEeeCCCeeecC---C----CeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCc--
Q psy6213 5 SPVHKHGLKADNGLAQPS---R----NVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGA-- 75 (330)
Q Consensus 5 ~~v~~~~~s~~~~~~~~g---d----~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-- 75 (330)
..+..++|||||++++.+ + ..|++||+++++.... ..+.. .+..++|+| + +.|+.++.++.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~-------~~~~~~wsp-D-~~l~~~~~~~~~~ 232 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWV-------KFSGLAWLG-N-DALLYSRFAEPKE 232 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEE-------ESCCCEEST-T-SEEEEEECCCC--
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCc-------eeccEEEEC-C-CEEEEEEecCccc
Confidence 367889999999995544 2 3699999999886542 11111 125789999 7 87777766543
Q ss_pred ------------EEEEECCCCCCCceeEEec--ccccceeEEEEEecCCCEEEEEecCC-----cEEEEEeecC--ceee
Q psy6213 76 ------------VVVWNLGQISRSKQERVFN--DHKRTVNKVSFHYVESNWLISGSQDG-----TMRLFDIRCQ--ESTK 134 (330)
Q Consensus 76 ------------i~iw~~~~~~~~~~~~~~~--~~~~~i~~i~~~~~~~~~l~~~~~d~-----~i~i~d~~~~--~~~~ 134 (330)
|++|++.+... .....+. .+...+..+.|+| ++++|+..+.++ .|++||+.++ +...
T Consensus 233 ~~~~~~~~~~~~v~~~~lgt~~~-~~~lv~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~ 310 (741)
T 1yr2_A 233 GQAFQALNYNQTVWLHRLGTPQS-ADQPVFATPELPKRGHGASVSS-DGRWVVITSSEGTDPVNTVHVARVTNGKIGPVT 310 (741)
T ss_dssp ------CCCCCEEEEEETTSCGG-GCEEEECCTTCTTCEEEEEECT-TSCEEEEEEECTTCSCCEEEEEEEETTEECCCE
T ss_pred ccccccCCCCCEEEEEECCCCch-hCEEEeccCCCCeEEEEEEECC-CCCEEEEEEEccCCCcceEEEEECCCCCCcccE
Confidence 88999876321 1122232 2334588999998 888888776544 8999999877 3144
Q ss_pred eeecCCCCeEEEEEcCCCCcEEEEEec---CCcEEEEecCCCc-cceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEE
Q psy6213 135 IFHSNTESVRDVEFNPHSPYAFASVSE---NGTIQQWDVRRPE-KCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKV 210 (330)
Q Consensus 135 ~~~~~~~~v~~~~~~~~~~~~~~~~~~---dg~i~i~d~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 210 (330)
.+..+........ +|+++.+++.... ++.|.+||+.++. .....+..+...+..+.+. ++.++++...|+..++
T Consensus 311 ~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l 388 (741)
T 1yr2_A 311 ALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQV 388 (741)
T ss_dssp EEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEE
T ss_pred EecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEE
Confidence 4544444455443 4888854444432 3459999987642 3333444455556678887 6677888888988777
Q ss_pred EeCC-CCccccce-eccccceEEEEEcCCCCeEEEEee-cccCCeEEEEEccCCC
Q psy6213 211 WDLS-IKPSLEYS-INTIASVSRIKWRPQRKFHLASCS-LVVDSSVNVWDIRRPY 262 (330)
Q Consensus 211 ~d~~-~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~-~~~~~~i~i~d~~~~~ 262 (330)
|.+. .+...... .+....+..+.++|+++.++.+.+ ....+.|++||+.+++
T Consensus 389 ~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 389 LAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 7554 23222222 223567889999999886655443 1135789999998764
No 201
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.70 E-value=3.5e-14 Score=115.76 Aligned_cols=234 Identities=9% Similarity=0.069 Sum_probs=156.0
Q ss_pred eeeeeecccCCcEEEE-------EcCCCcEEEEECCCCCCCceeEEec----ccccceeEEEEEecC-CCEEEEEecCCc
Q psy6213 54 CNDVAWSCIEENHIAT-------GATNGAVVVWNLGQISRSKQERVFN----DHKRTVNKVSFHYVE-SNWLISGSQDGT 121 (330)
Q Consensus 54 v~~~~~~~~~~~~l~~-------~~~dg~i~iw~~~~~~~~~~~~~~~----~~~~~i~~i~~~~~~-~~~l~~~~~d~~ 121 (330)
..+++|++ ++.++++ +..++.|..||..+ .+...... ++...+.++++++ + ++++++. ..+.
T Consensus 20 ~~~~~~~~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~---g~~~~~~~~~~~~~~~~~~~i~~~~-~~g~l~v~~-~~~~ 93 (314)
T 1pjx_A 20 AEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKT---GKKTVICKPEVNGYGGIPAGCQCDR-DANQLFVAD-MRLG 93 (314)
T ss_dssp CEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTT---CCEEEEECCEETTEECCEEEEEECS-SSSEEEEEE-TTTE
T ss_pred ccCceECC-CCCEEEEEeccccCCCCCCEEEEEeCCC---CcEEEEEecccCCCCCCCceEEEec-CCCcEEEEE-CCCC
Confidence 37899998 8887777 56788999999766 33322111 2456788999997 5 5545544 4457
Q ss_pred EEEEEeecCceeee-eec----CCCCeEEEEEcCCCCcEEEEEecC---------------CcEEEEecCCCccceeeec
Q psy6213 122 MRLFDIRCQESTKI-FHS----NTESVRDVEFNPHSPYAFASVSEN---------------GTIQQWDVRRPEKCFYQFT 181 (330)
Q Consensus 122 i~i~d~~~~~~~~~-~~~----~~~~v~~~~~~~~~~~~~~~~~~d---------------g~i~i~d~~~~~~~~~~~~ 181 (330)
|.+||.+ ++.... ... ....+.++++++++. ++++...+ +.|..+|.. ++. ..+.
T Consensus 94 l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--g~~-~~~~ 168 (314)
T 1pjx_A 94 LLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD--GQM-IQVD 168 (314)
T ss_dssp EEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT--SCE-EEEE
T ss_pred EEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCC--CCE-EEec
Confidence 9999987 654433 221 123578999999997 56665544 567777765 222 2222
Q ss_pred cCCCCeEEEEEc----CCCCEEEEE-ecCCcEEEEeCC-CCcc----cccee-ccc-cceEEEEEcCCCCeEEEEeeccc
Q psy6213 182 AHSGPIFACDWH----PEHAWLATA-SRDKTIKVWDLS-IKPS----LEYSI-NTI-ASVSRIKWRPQRKFHLASCSLVV 249 (330)
Q Consensus 182 ~~~~~i~~~~~~----~~~~~l~~~-~~dg~i~i~d~~-~~~~----~~~~~-~~~-~~v~~~~~~~~~~~l~~~~~~~~ 249 (330)
.+......++++ |+++.++.+ ..++.|.+||.. .++. ..... .+. ..+..++++++|.. +++.. .
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l-~v~~~--~ 245 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNL-LVANW--G 245 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCE-EEEEE--T
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCE-EEEEc--C
Confidence 334557889999 999765555 567899999976 3321 11111 112 56788999999985 44443 4
Q ss_pred CCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEE-EeecCCeEeeeecc
Q psy6213 250 DSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFI-ASSRVSIIPRAKNI 302 (330)
Q Consensus 250 ~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-s~~~dg~i~iw~~~ 302 (330)
++.|.+||..+++. ...+..+...+.+++++|+++.|+ +...++.|..|+..
T Consensus 246 ~~~i~~~d~~~g~~-~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 246 SSHIEVFGPDGGQP-KMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp TTEEEEECTTCBSC-SEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCEEEEEcCCCCcE-eEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 88999999886654 555666667899999999999554 44556788888654
No 202
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.69 E-value=4.2e-14 Score=119.37 Aligned_cols=233 Identities=8% Similarity=0.037 Sum_probs=158.7
Q ss_pred ccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCC--cEEEEE
Q psy6213 5 SPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNG--AVVVWN 80 (330)
Q Consensus 5 ~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~i~iw~ 80 (330)
.....++|+|+|+++++. ++.|++||.+++........ . .. .. ++|+| +++.|+++..++ .|.+++
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~--~-----~~-~~-ia~~~-~g~~l~~~d~~~~~~I~~~d 200 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPG--F-----KG-GK-PAVTK-DKQRVYSIGWEGTHTVYVYM 200 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEET--C-----CB-CB-CEECT-TSSEEEEEBSSTTCEEEEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeecc--C-----CC-Cc-eeEec-CCCcEEEEecCCCceEEEEE
Confidence 457789999999985544 89999999988776544322 1 11 24 89999 888888887766 788888
Q ss_pred CCCCCCCceeEEe---cc-cccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeee----eecCCCCe--EEEEEcC
Q psy6213 81 LGQISRSKQERVF---ND-HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKI----FHSNTESV--RDVEFNP 150 (330)
Q Consensus 81 ~~~~~~~~~~~~~---~~-~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~----~~~~~~~v--~~~~~~~ 150 (330)
.... .....+ .. ....+.+++++| ++..|+.+..++.|+.||..++..... ..+....- ..++|+|
T Consensus 201 ~~~~---~~~~~~g~~~~~~~~~p~~iav~p-~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p 276 (409)
T 3hrp_A 201 KASG---WAPTRIGQLGSTFSGKIGAVALDE-TEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYF 276 (409)
T ss_dssp GGGT---TCEEEEEECCTTSCSCCCBCEECT-TSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEET
T ss_pred cCCC---ceeEEeeeccchhcCCcEEEEEeC-CCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeC
Confidence 7652 222222 12 446678899998 444555577788999999987653322 11122222 3999999
Q ss_pred CCCcEEEEEecCCcEEEEecCCCccceeeeccC---------------CCCeEEEEEcCCCCEEEEEe-cCCcEEEEeCC
Q psy6213 151 HSPYAFASVSENGTIQQWDVRRPEKCFYQFTAH---------------SGPIFACDWHPEHAWLATAS-RDKTIKVWDLS 214 (330)
Q Consensus 151 ~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~---------------~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~ 214 (330)
++.+++++-..++.|+.|+.... ...+.++ -.....++++|+|+++++-. .++.|+.||+.
T Consensus 277 ~~g~lyv~d~~~~~I~~~~~~g~---~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~ 353 (409)
T 3hrp_A 277 VDSNFYMSDQNLSSVYKITPDGE---CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDIL 353 (409)
T ss_dssp TTTEEEEEETTTTEEEEECTTCC---EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETT
T ss_pred CCCEEEEEeCCCCEEEEEecCCC---EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECC
Confidence 76657777777889999997642 2222222 23578999999999888877 88999999976
Q ss_pred CCccccceecc---------------ccceEEEEEcCCCCeEEEEeecccCCeEEEEEc
Q psy6213 215 IKPSLEYSINT---------------IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258 (330)
Q Consensus 215 ~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~ 258 (330)
++.. ...... ......+++++++. |+++.. .++.|+.+++
T Consensus 354 ~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~-lyVad~--~n~~Ir~i~~ 408 (409)
T 3hrp_A 354 DGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGG-YWIAEA--WGKAIRKYAV 408 (409)
T ss_dssp TTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSE-EEEEES--TTCEEEEEEE
T ss_pred CCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCC-EEEEEC--CCCeEEEEEe
Confidence 6632 222221 24688999999976 455555 5888888775
No 203
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.69 E-value=4.6e-14 Score=112.62 Aligned_cols=210 Identities=11% Similarity=0.079 Sum_probs=153.3
Q ss_pred CCe-eecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEe
Q psy6213 16 NGL-AQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVF 93 (330)
Q Consensus 16 ~~~-~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 93 (330)
+++ ++.+ ++.|.+||.++++.+-.+..+.. ..+.+++++| ++++++ +.++.|..||. + ++.+..+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~------~~~~~~~~~p-dG~ilv--s~~~~V~~~d~-~---G~~~W~~ 71 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKG------WECNSVAATK-AGEILF--SYSKGAKMITR-D---GRELWNI 71 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTT------CCCCEEEECT-TSCEEE--ECBSEEEEECT-T---SCEEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCcc------CCCcCeEECC-CCCEEE--eCCCCEEEECC-C---CCEEEEE
Confidence 455 4444 99999999999998776655421 1247889999 898888 34678999998 5 5666666
Q ss_pred ccc-ccceeEEEEEecCCCEEEEEec-CCcEEEEEeecCceeeeeecC------CCCeEEEEEcCCCCcEEEEEecCCcE
Q psy6213 94 NDH-KRTVNKVSFHYVESNWLISGSQ-DGTMRLFDIRCQESTKIFHSN------TESVRDVEFNPHSPYAFASVSENGTI 165 (330)
Q Consensus 94 ~~~-~~~i~~i~~~~~~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~------~~~v~~~~~~~~~~~~~~~~~~dg~i 165 (330)
..+ ...+.++.+.| +++++++.+. ++.+..+|. +++.+..+... ......+++.++++ ++++...++.|
T Consensus 72 ~~~~~~~~~~~~~~~-dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~~~~~v 148 (276)
T 3no2_A 72 AAPAGCEMQTARILP-DGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFATSEV 148 (276)
T ss_dssp ECCTTCEEEEEEECT-TSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEETTTTEE
T ss_pred cCCCCccccccEECC-CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCC-EEEEecCCCEE
Confidence 654 35788889998 8899988877 778888876 57766665421 12345667889998 68888889999
Q ss_pred EEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceecc------ccceEEEEEcCCCC
Q psy6213 166 QQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINT------IASVSRIKWRPQRK 239 (330)
Q Consensus 166 ~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~v~~~~~~~~~~ 239 (330)
..||.+ ++.+..+... ..+.++...++|+.++++..++.|..+|..+++.+...... ...+..+...++|.
T Consensus 149 ~~~d~~--G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~ 225 (276)
T 3no2_A 149 REIAPN--GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGG 225 (276)
T ss_dssp EEECTT--SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSC
T ss_pred EEECCC--CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCC
Confidence 999987 4556666543 45667888899999999988889999999988664444322 12378888899998
Q ss_pred eEEEE
Q psy6213 240 FHLAS 244 (330)
Q Consensus 240 ~l~~~ 244 (330)
.+++.
T Consensus 226 i~v~~ 230 (276)
T 3no2_A 226 LYICN 230 (276)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 64444
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.69 E-value=7e-14 Score=117.97 Aligned_cols=232 Identities=10% Similarity=0.105 Sum_probs=158.4
Q ss_pred eeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCC--cEEEEEeecCc
Q psy6213 54 CNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDG--TMRLFDIRCQE 131 (330)
Q Consensus 54 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~--~i~i~d~~~~~ 131 (330)
...++|++ +++++++...++.|+.||..+ ......... ..... ++|+| +++.|+++..++ .|..++...+.
T Consensus 133 P~~la~d~-~g~lyv~d~~~~~I~~id~~~---g~~~~~~~~-~~~~~-ia~~~-~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 133 MWGIAAVG-NNTVLAYQRDDPRVRLISVDD---NKVTTVHPG-FKGGK-PAVTK-DKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp EEEEEECS-TTEEEEEETTTTEEEEEETTT---TEEEEEEET-CCBCB-CEECT-TSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred ceEEEEeC-CCCEEEEecCCCcEEEEECCC---CEEEEeecc-CCCCc-eeEec-CCCcEEEEecCCCceEEEEEcCCCc
Confidence 58899998 888888877789999999976 343333333 23334 89998 788888887766 78888887665
Q ss_pred eeeee----ecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceee---eccCCCCe-E-EEEEcCC-CCEEEE
Q psy6213 132 STKIF----HSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQ---FTAHSGPI-F-ACDWHPE-HAWLAT 201 (330)
Q Consensus 132 ~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~---~~~~~~~i-~-~~~~~~~-~~~l~~ 201 (330)
....+ ......+.+++++|++.+++ .+..++.|+.||..+....... ..++...- . .++|+|+ +.++++
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~ly-v~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLY-FVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEE-EECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEE-EEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence 43333 21445678899999655444 4677889999999864321110 11222222 3 9999995 666666
Q ss_pred EecCCcEEEEeCCCCccccceecc---------------ccceEEEEEcCCCCeEEEEe-ecccCCeEEEEEccCCCccc
Q psy6213 202 ASRDKTIKVWDLSIKPSLEYSINT---------------IASVSRIKWRPQRKFHLASC-SLVVDSSVNVWDIRRPYIPL 265 (330)
Q Consensus 202 ~~~dg~i~i~d~~~~~~~~~~~~~---------------~~~v~~~~~~~~~~~l~~~~-~~~~~~~i~i~d~~~~~~~~ 265 (330)
-..++.|+.|+.... . ...... ......++++|+|..+++-. . ++.|+.|++.++. +
T Consensus 285 d~~~~~I~~~~~~g~-~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~---~~~I~~~~~~~G~--v 357 (409)
T 3hrp_A 285 DQNLSSVYKITPDGE-C-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK---GYCLRKLDILDGY--V 357 (409)
T ss_dssp ETTTTEEEEECTTCC-E-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT---TCEEEEEETTTTE--E
T ss_pred eCCCCEEEEEecCCC-E-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC---CCEEEEEECCCCE--E
Confidence 667889999997653 1 111111 23588999999998544433 3 7899999977664 3
Q ss_pred eEeecC---------------CCCeEEEEEecCCCEEEEeecCCeEeeee
Q psy6213 266 ASFTEH---------------KDVVSGLAWRGDPQLFIASSRVSIIPRAK 300 (330)
Q Consensus 266 ~~~~~~---------------~~~v~~~~~~~~~~~l~s~~~dg~i~iw~ 300 (330)
..+.++ -....++++++++.++++-..++.|+.+.
T Consensus 358 ~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~ 407 (409)
T 3hrp_A 358 STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYA 407 (409)
T ss_dssp EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEE
T ss_pred EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEE
Confidence 444443 24589999999988888888888888764
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.68 E-value=2.4e-13 Score=109.93 Aligned_cols=236 Identities=8% Similarity=-0.016 Sum_probs=163.4
Q ss_pred eeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCcee
Q psy6213 54 CNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQEST 133 (330)
Q Consensus 54 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (330)
+.++++.+ ++++.++...++.|.+|+... ......+......+..+++.+ +++++++...++.|..+|.. ++..
T Consensus 22 p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~~~i~~~~-~g~l~v~~~~~~~v~~~d~~-g~~~ 95 (300)
T 2qc5_A 22 PYGITSSE-DGKVWFTQHKANKISSLDQSG---RIKEFEVPTPDAKVMCLIVSS-LGDIWFTENGANKIGKLSKK-GGFT 95 (300)
T ss_dssp EEEEEECT-TSCEEEEETTTTEEEEECTTS---CEEEEECSSTTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEE
T ss_pred cceeeECC-CCCEEEEcCCCCeEEEECCCC---ceEEEECCCCCCcceeEEECC-CCCEEEEecCCCeEEEECCC-CCeE
Confidence 58899998 888888777788999999762 111122233346788999987 77777776667889999987 5443
Q ss_pred ee-eecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEe
Q psy6213 134 KI-FHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212 (330)
Q Consensus 134 ~~-~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d 212 (330)
.. .......+..+++.+++. ++++...++.|..+|.. +......+......+..+++.+++++.++...++.|..||
T Consensus 96 ~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~ 173 (300)
T 2qc5_A 96 EYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRIT 173 (300)
T ss_dssp EEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred EecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEEC
Confidence 21 222346789999999887 56666667889999987 2322222333456789999999999777666678899999
Q ss_pred CCCCcccccee-ccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEee
Q psy6213 213 LSIKPSLEYSI-NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291 (330)
Q Consensus 213 ~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 291 (330)
. +++...... .....+..+++++++.. +++.. ..+.|.+||. ++.........+...+.+++++++|++.++..
T Consensus 174 ~-~g~~~~~~~~~~~~~~~~i~~d~~g~l-~v~~~--~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~ 248 (300)
T 2qc5_A 174 N-TGKLEEYPLPTNAAAPVGITSGNDGAL-WFVEI--MGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEW 248 (300)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECTTSSE-EEEET--TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEET
T ss_pred C-CCcEEEeeCCCCCCCcceEEECCCCCE-EEEcc--CCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEecc
Confidence 8 443322211 23456889999999975 55544 4778999998 44331222333456789999999999777766
Q ss_pred cCCeEeeeecc
Q psy6213 292 RVSIIPRAKNI 302 (330)
Q Consensus 292 ~dg~i~iw~~~ 302 (330)
.++.|..++..
T Consensus 249 ~~~~i~~~~~~ 259 (300)
T 2qc5_A 249 GANQIGRITND 259 (300)
T ss_dssp TTTEEEEECTT
T ss_pred CCCeEEEECCC
Confidence 67889988764
No 206
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.67 E-value=1.3e-13 Score=111.55 Aligned_cols=223 Identities=7% Similarity=0.017 Sum_probs=147.9
Q ss_pred eEEEEeeCCCe-eecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCC
Q psy6213 8 HKHGLKADNGL-AQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQI 84 (330)
Q Consensus 8 ~~~~~s~~~~~-~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 84 (330)
-+..|+|++.. +.+. ++.|..||.++++.. .+.. ...+.+++++| +++++++ . ++.|.+||.++
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~--------~~~~~~i~~~~-dG~l~v~-~-~~~l~~~d~~~- 82 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVTM--------DAPVSSVALRQ-SGGYVAT-I-GTKFCALNWKE- 82 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEEC--------SSCEEEEEEBT-TSSEEEE-E-TTEEEEEETTT-
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEeC--------CCceEEEEECC-CCCEEEE-E-CCeEEEEECCC-
Confidence 46789996554 5554 899999999886642 2211 12368999999 8885554 4 56799999876
Q ss_pred CCCceeEEecc----cccceeEEEEEecCCCEEEEEecC---------CcEEEEEeecCceeeeeecCCCCeEEEEEcCC
Q psy6213 85 SRSKQERVFND----HKRTVNKVSFHYVESNWLISGSQD---------GTMRLFDIRCQESTKIFHSNTESVRDVEFNPH 151 (330)
Q Consensus 85 ~~~~~~~~~~~----~~~~i~~i~~~~~~~~~l~~~~~d---------~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~ 151 (330)
.+....... ....++.+++.| +++++++.... ..-.+|.+........+.........++|+|+
T Consensus 83 --g~~~~~~~~~~~~~~~~~~di~~d~-dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spd 159 (297)
T 3g4e_A 83 --QSAVVLATVDNDKKNNRFNDGKVDP-AGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLD 159 (297)
T ss_dssp --TEEEEEEECCTTCSSEEEEEEEECT-TSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTT
T ss_pred --CcEEEEEecCCCCCCCCCCCEEECC-CCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCC
Confidence 332222111 124578899998 77766654322 23455555432222223333345688999999
Q ss_pred CCcEEEEEecCCcEEEEecC-CCcc-----ceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceecc
Q psy6213 152 SPYAFASVSENGTIQQWDVR-RPEK-----CFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINT 225 (330)
Q Consensus 152 ~~~~~~~~~~dg~i~i~d~~-~~~~-----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 225 (330)
++.++++.+.++.|.+||+. ..+. ....+..+.+....++++++|++.++....+.|..||..+++........
T Consensus 160 g~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 160 HKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp SCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECS
T ss_pred CCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECC
Confidence 98766777778999999974 2122 12223334456789999999988887777888999999877555444444
Q ss_pred ccceEEEEEc-CCCCeEEEEee
Q psy6213 226 IASVSRIKWR-PQRKFHLASCS 246 (330)
Q Consensus 226 ~~~v~~~~~~-~~~~~l~~~~~ 246 (330)
...+++++|. |+++.|+++..
T Consensus 240 ~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 240 VDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp SSBEEEEEEESGGGCEEEEEEB
T ss_pred CCCceEEEEeCCCCCEEEEEcC
Confidence 5679999998 88887777665
No 207
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.67 E-value=2e-13 Score=110.40 Aligned_cols=224 Identities=9% Similarity=0.103 Sum_probs=149.5
Q ss_pred eeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceee
Q psy6213 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTK 134 (330)
Q Consensus 55 ~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 134 (330)
.+..|+|.++.++++...++.|..||..+ ... ..+ .....+.+++++| +++++++ . ++.|.+||.++++...
T Consensus 16 Egp~w~~~~~~l~~~d~~~~~i~~~d~~~---~~~-~~~-~~~~~~~~i~~~~-dG~l~v~-~-~~~l~~~d~~~g~~~~ 87 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAKKVCRWDSFT---KQV-QRV-TMDAPVSSVALRQ-SGGYVAT-I-GTKFCALNWKEQSAVV 87 (297)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTT---CCE-EEE-ECSSCEEEEEEBT-TSSEEEE-E-TTEEEEEETTTTEEEE
T ss_pred cCCeEECCCCEEEEEECCCCEEEEEECCC---CcE-EEE-eCCCceEEEEECC-CCCEEEE-E-CCeEEEEECCCCcEEE
Confidence 67899985566777777889999999876 222 222 2346789999998 7775544 4 5689999998776543
Q ss_pred eeec----CCCCeEEEEEcCCCCcEEEEEecC---------CcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEE-
Q psy6213 135 IFHS----NTESVRDVEFNPHSPYAFASVSEN---------GTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLA- 200 (330)
Q Consensus 135 ~~~~----~~~~v~~~~~~~~~~~~~~~~~~d---------g~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~- 200 (330)
.... ....+..++++|+|+ ++++.... ..-.+|.+...+.. ..+.......+.++|+|+++.|+
T Consensus 88 ~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~~~~~~~~pngi~~spdg~~lyv 165 (297)
T 3g4e_A 88 LATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHHV-KKYFDQVDISNGLDWSLDHKIFYY 165 (297)
T ss_dssp EEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSCE-EEEEEEESBEEEEEECTTSCEEEE
T ss_pred EEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCCE-EEEeeccccccceEEcCCCCEEEE
Confidence 3322 123478899999998 45544221 22344444332322 22333445578999999998664
Q ss_pred EEecCCcEEEEeCC--CCccc----c-ceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCC
Q psy6213 201 TASRDKTIKVWDLS--IKPSL----E-YSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKD 273 (330)
Q Consensus 201 ~~~~dg~i~i~d~~--~~~~~----~-~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~ 273 (330)
+.+.++.|.+||+. ++... . ........+..++++++|.. .++.. ..+.|..||..+++. +..+..+..
T Consensus 166 ~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~l-wva~~--~~~~v~~~d~~tG~~-~~~i~~p~~ 241 (297)
T 3g4e_A 166 IDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKL-WVACY--NGGRVIRLDPVTGKR-LQTVKLPVD 241 (297)
T ss_dssp EEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCE-EEEEE--TTTEEEEECTTTCCE-EEEEECSSS
T ss_pred ecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCE-EEEEc--CCCEEEEEcCCCceE-EEEEECCCC
Confidence 55567889999873 33211 1 11122356789999999975 55554 478999999987765 667776667
Q ss_pred CeEEEEEe-cCCCEEEEeec
Q psy6213 274 VVSGLAWR-GDPQLFIASSR 292 (330)
Q Consensus 274 ~v~~~~~~-~~~~~l~s~~~ 292 (330)
.+++++|. |+++.|+.++.
T Consensus 242 ~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 242 KTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp BEEEEEEESGGGCEEEEEEB
T ss_pred CceEEEEeCCCCCEEEEEcC
Confidence 89999998 88887766554
No 208
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.67 E-value=1.7e-13 Score=112.85 Aligned_cols=272 Identities=10% Similarity=-0.006 Sum_probs=180.3
Q ss_pred EEEeeCCCe-eecC------CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEc----------C
Q psy6213 10 HGLKADNGL-AQPS------RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGA----------T 72 (330)
Q Consensus 10 ~~~s~~~~~-~~~g------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~----------~ 72 (330)
....|+++. .++. ++.|.+.|..+++....+... .. .. ++++| ++++++++. .
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG--~~------P~-va~sp-DG~~lyVan~~~~r~~~G~~ 107 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGG--FL------PN-PVVAD-DGSFIAHASTVFSRIARGER 107 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEEC--SS------CE-EEECT-TSSCEEEEEEEEEETTEEEE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECC--CC------Cc-EEECC-CCCEEEEEcccccccccCCC
Confidence 445788888 3332 468999999998877655432 11 14 99999 888887765 3
Q ss_pred CCcEEEEECCCCCCCceeEEeccc-------ccceeEEEEEecCCCEEEEEec--CCcEEEEEeecCceeeeeecCCCCe
Q psy6213 73 NGAVVVWNLGQISRSKQERVFNDH-------KRTVNKVSFHYVESNWLISGSQ--DGTMRLFDIRCQESTKIFHSNTESV 143 (330)
Q Consensus 73 dg~i~iw~~~~~~~~~~~~~~~~~-------~~~i~~i~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~v 143 (330)
++.|.+||..+ .+....+... ......+.++| ++++++++.. ++.|.++|+.+++.+.++....
T Consensus 108 ~~~VsviD~~t---~~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--- 180 (386)
T 3sjl_D 108 TDYVEVFDPVT---LLPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--- 180 (386)
T ss_dssp EEEEEEECTTT---CCEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS---
T ss_pred CCEEEEEECCC---CeEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC---
Confidence 57899999988 5555555321 12456799998 8888887764 6899999999999988886432
Q ss_pred EEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeec----cCCCCeE-EEEEc-CCCCEEEEEecCCcEEEEeCCCCc
Q psy6213 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFT----AHSGPIF-ACDWH-PEHAWLATASRDKTIKVWDLSIKP 217 (330)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~~i~-~~~~~-~~~~~l~~~~~dg~i~i~d~~~~~ 217 (330)
+....|.+...+++.+.||.+.+.++...++...... ....++. ...|. ++|++++ .+.+|.+.+.|..+..
T Consensus 181 -~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 181 -CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGD 258 (386)
T ss_dssp -EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSS
T ss_pred -cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCc
Confidence 1223355554677888899999999876333322111 1112222 24664 5776555 5568999999997653
Q ss_pred c-ccceec-----------cccceEEEEEcCCCCeEEEEeecc-------cCCeEEEEEccCCCccceEeecCCCCeEEE
Q psy6213 218 S-LEYSIN-----------TIASVSRIKWRPQRKFHLASCSLV-------VDSSVNVWDIRRPYIPLASFTEHKDVVSGL 278 (330)
Q Consensus 218 ~-~~~~~~-----------~~~~v~~~~~~~~~~~l~~~~~~~-------~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~ 278 (330)
. ...... .......++++|+++.+++..... ..+.|.++|+.+.+. +..+.. ...++++
T Consensus 259 ~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv-~~~i~v-g~~~~~l 336 (386)
T 3sjl_D 259 AKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGER-LAKFEM-GHEIDSI 336 (386)
T ss_dssp CEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE-EEEEEE-EEEECEE
T ss_pred ceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeE-EEEEEC-CCCcceE
Confidence 2 111110 122344577899999877765310 125799999999886 444432 2368899
Q ss_pred EEecCCC-EEEEe-ecCCeEeeeecc
Q psy6213 279 AWRGDPQ-LFIAS-SRVSIIPRAKNI 302 (330)
Q Consensus 279 ~~~~~~~-~l~s~-~~dg~i~iw~~~ 302 (330)
+++||++ +|+++ ..++.|.+++..
T Consensus 337 avs~D~~~~ly~tn~~~~~VsViD~~ 362 (386)
T 3sjl_D 337 NVSQDEKPLLYALSTGDKTLYIHDAE 362 (386)
T ss_dssp EECSSSSCEEEEEETTTTEEEEEETT
T ss_pred EECCCCCeEEEEEcCCCCeEEEEECC
Confidence 9999997 66665 458999999754
No 209
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.66 E-value=9.5e-14 Score=114.30 Aligned_cols=260 Identities=12% Similarity=0.057 Sum_probs=169.6
Q ss_pred EEEEeeCCCe-eecC-----------CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcC--CC
Q psy6213 9 KHGLKADNGL-AQPS-----------RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGAT--NG 74 (330)
Q Consensus 9 ~~~~s~~~~~-~~~g-----------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--dg 74 (330)
.++++|||++ .++. ++.|.+||..+.+....+....+...........++|+| ++++++++.. ++
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp-DGk~lyVan~~~~~ 160 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP-DGKTLLFYQFSPAP 160 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT-TSSEEEEEECSSSC
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC-CCCEEEEEEcCCCC
Confidence 4999999998 3331 467999999998887776553211111111236799999 9998888764 68
Q ss_pred cEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeec-Cceeeeeec----CCCCeE-EEEE
Q psy6213 75 AVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC-QESTKIFHS----NTESVR-DVEF 148 (330)
Q Consensus 75 ~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~----~~~~v~-~~~~ 148 (330)
.|.++|+.+ .+.+..+.... . ....|.+.+.+++.+.||.+.+.++.+ ++....... ...++. ...|
T Consensus 161 ~VsVID~~t---~~vv~tI~v~g--~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~ 233 (386)
T 3sjl_D 161 AVGVVDLEG---KAFKRMLDVPD--C--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAY 233 (386)
T ss_dssp EEEEEETTT---TEEEEEEECCS--E--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEE
T ss_pred eEEEEECCC---CcEEEEEECCC--c--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecccccccccccee
Confidence 899999998 66666664321 1 222344677788888899999999876 554221111 112222 2455
Q ss_pred c-CCCCcEEEEEecCCcEEEEecCCCcc-ceeeec----------cCCCCeEEEEEcCCCCEEEEEec----------CC
Q psy6213 149 N-PHSPYAFASVSENGTIQQWDVRRPEK-CFYQFT----------AHSGPIFACDWHPEHAWLATASR----------DK 206 (330)
Q Consensus 149 ~-~~~~~~~~~~~~dg~i~i~d~~~~~~-~~~~~~----------~~~~~i~~~~~~~~~~~l~~~~~----------dg 206 (330)
. ++|+ ++..+.+|.|++.|+..... ....+. -..+....++++|+++.++.... .+
T Consensus 234 ~~~dG~--~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~ 311 (386)
T 3sjl_D 234 SQKAGR--LVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASR 311 (386)
T ss_dssp ETTTTE--EEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEE
T ss_pred EcCCCc--EEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCC
Confidence 4 5664 33456689999999975321 122221 01234456788999888877653 24
Q ss_pred cEEEEeCCCCccccceeccccceEEEEEcCCCC-eEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecC
Q psy6213 207 TIKVWDLSIKPSLEYSINTIASVSRIKWRPQRK-FHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGD 283 (330)
Q Consensus 207 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 283 (330)
.|.++|+.+.+.+ .......++..+++++|++ .|+++.. .++.|.++|..+++. +.++..- +.-+.|.+++|
T Consensus 312 ~V~viD~~t~kv~-~~i~vg~~~~~lavs~D~~~~ly~tn~--~~~~VsViD~~t~k~-~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 312 FVVVLDAKTGERL-AKFEMGHEIDSINVSQDEKPLLYALST--GDKTLYIHDAESGEE-LRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp EEEEEETTTCCEE-EEEEEEEEECEEEECSSSSCEEEEEET--TTTEEEEEETTTCCE-EEEECCC-CSSCCEEEECC
T ss_pred EEEEEECCCCeEE-EEEECCCCcceEEECCCCCeEEEEEcC--CCCeEEEEECCCCcE-EEEecCC-CCCceeEECCc
Confidence 6999999998544 4444456888999999997 5555554 589999999999875 5555432 33455666665
No 210
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.66 E-value=1.1e-12 Score=109.24 Aligned_cols=244 Identities=9% Similarity=-0.069 Sum_probs=159.4
Q ss_pred EEEEeeCCCe-eec----------C-CCeEEEEEcCCcceeeeecee-eccccccccceeeeeecccCCcEEEEEcC--C
Q psy6213 9 KHGLKADNGL-AQP----------S-RNVFKIFLIKDTEFVETHNLR-VGKNINLNFSCNDVAWSCIEENHIATGAT--N 73 (330)
Q Consensus 9 ~~~~s~~~~~-~~~----------g-d~~i~iw~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--d 73 (330)
.++++|||++ .++ . ++.|.+||..+.+........ ......... ...++|+| ++++|+++.. +
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~-p~~~~~sp-DG~~l~v~n~~~~ 147 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPY-SWMNANTP-NNADLLFFQFAAG 147 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCC-ccceEECC-CCCEEEEEecCCC
Confidence 7899999998 333 1 467999999987776655443 111100011 26799999 9999988864 4
Q ss_pred CcEEEEECCCCCCCceeEE-ecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeee-----cCCCCe-EEE
Q psy6213 74 GAVVVWNLGQISRSKQERV-FNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFH-----SNTESV-RDV 146 (330)
Q Consensus 74 g~i~iw~~~~~~~~~~~~~-~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-----~~~~~v-~~~ 146 (330)
+.|.++| .+ .+.... +... . ++.+.|.+.+.+++.+.||.+.++|. +++...... ....++ ...
T Consensus 148 ~~v~viD-~t---~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~ 218 (373)
T 2mad_H 148 PAVGLVV-QG---GSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQP 218 (373)
T ss_pred CeEEEEE-CC---CCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecc
Confidence 7899999 87 555555 4321 1 24555656677788888999999999 777663322 122222 234
Q ss_pred EEcCCCCcEEEEEecCCcEEEEecCCCcc-ceeeecc----------CCCCeEEEEEcCCCCEEEEEec----------C
Q psy6213 147 EFNPHSPYAFASVSENGTIQQWDVRRPEK-CFYQFTA----------HSGPIFACDWHPEHAWLATASR----------D 205 (330)
Q Consensus 147 ~~~~~~~~~~~~~~~dg~i~i~d~~~~~~-~~~~~~~----------~~~~i~~~~~~~~~~~l~~~~~----------d 205 (330)
.+.+++..+++. +..+.+.+.|+..... ....+.. .......+.++|+++.++++.. .
T Consensus 219 ~~~~~~~~~~~~-~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~ 297 (373)
T 2mad_H 219 AQANKSGRIVWP-VYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAA 297 (373)
T ss_pred eeEecCCEEEEE-cCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCC
Confidence 566776644444 4678999999875321 1122211 1223445789999988877653 3
Q ss_pred CcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceE
Q psy6213 206 KTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLAS 267 (330)
Q Consensus 206 g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~ 267 (330)
+.|.++|..+.+..... ........++|+|||++++.++.. .++.|.++|+.+.+. +..
T Consensus 298 ~~V~VID~~t~~vv~~i-~~g~~p~~i~~s~Dg~~~l~v~~~-~~~~V~ViD~~t~~v-v~~ 356 (373)
T 2mad_H 298 KEVTSVTGLVGQTSSQI-SLGHDVDAISVAQDGGPDLYALSA-GTEVLHIYDAGAGDQ-DQS 356 (373)
T ss_pred CeEEEEECCCCEEEEEE-ECCCCcCeEEECCCCCeEEEEEcC-CCCeEEEEECCCCCE-Eee
Confidence 57999999988544433 455578999999999943444431 389999999999876 444
No 211
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.65 E-value=9e-14 Score=125.53 Aligned_cols=246 Identities=9% Similarity=0.115 Sum_probs=159.6
Q ss_pred CcccceEEEEeeCCCeee-----cC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCC-
Q psy6213 3 YLSPVHKHGLKADNGLAQ-----PS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNG- 74 (330)
Q Consensus 3 H~~~v~~~~~s~~~~~~~-----~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg- 74 (330)
|...+..++|||||++++ .| ...|++||+++++.... ...... ...++|+ +++.|+.++.+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k-------~~~~~Ws--Dg~~l~y~~~~~~ 196 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVK-------FSGISWL--GNEGFFYSSYDKP 196 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEE-------SCCCEEE--TTTEEEEEESSCC
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCce-------eccEEEe--CCCEEEEEEecCc
Confidence 445688899999999965 23 36899999999886543 111111 1567898 566666666553
Q ss_pred ------------cEEEEECCCCCCC-ceeEEecc-cccceeEEEEEecCCCEEEEEec----CCcEEEEEeecCc-eeee
Q psy6213 75 ------------AVVVWNLGQISRS-KQERVFND-HKRTVNKVSFHYVESNWLISGSQ----DGTMRLFDIRCQE-STKI 135 (330)
Q Consensus 75 ------------~i~iw~~~~~~~~-~~~~~~~~-~~~~i~~i~~~~~~~~~l~~~~~----d~~i~i~d~~~~~-~~~~ 135 (330)
.|++|++.+.... ..+..... |......+.|+| ++++|+.... +..|+++|+.+++ ....
T Consensus 197 ~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~ 275 (693)
T 3iuj_A 197 DGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTE-DDRFLLISAANSTSGNRLYVKDLSQENAPLLT 275 (693)
T ss_dssp C-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECT-TSCEEEEEEESSSSCCEEEEEETTSTTCCCEE
T ss_pred ccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcC-CCCEEEEEEccCCCCcEEEEEECCCCCCceEE
Confidence 3999998763211 12222223 444578899998 7777654432 2589999987764 3445
Q ss_pred eecCCCCeEEEEEcCCCCcEEEEEecC---CcEEEEecCCCcc-ceeeeccCCCCeEEEEEcCCCCEEEEEecCC---cE
Q psy6213 136 FHSNTESVRDVEFNPHSPYAFASVSEN---GTIQQWDVRRPEK-CFYQFTAHSGPIFACDWHPEHAWLATASRDK---TI 208 (330)
Q Consensus 136 ~~~~~~~v~~~~~~~~~~~~~~~~~~d---g~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---~i 208 (330)
+..+....... +++++..+++....+ +.|..+|+.++.. ....+..|...+. .|+++++.|+....++ .|
T Consensus 276 l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l 352 (693)
T 3iuj_A 276 VQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARV 352 (693)
T ss_dssp EECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEE
T ss_pred EeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEE
Confidence 55555555554 677777666666554 6799999987432 1344555665554 8899898887766544 68
Q ss_pred EEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeec-ccCCeEEEEEccCCC
Q psy6213 209 KVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSL-VVDSSVNVWDIRRPY 262 (330)
Q Consensus 209 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~-~~~~~i~i~d~~~~~ 262 (330)
++||+..........+....+..+.++++++.++.+.+. ..-+.++.||+.+++
T Consensus 353 ~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 353 EQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred EEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 999988653322223344567788889998877766540 112899999998765
No 212
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.64 E-value=1.4e-13 Score=115.29 Aligned_cols=258 Identities=9% Similarity=-0.014 Sum_probs=177.5
Q ss_pred CeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEc----------CCCcEEEEECCCCCCCceeEEe
Q psy6213 24 NVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGA----------TNGAVVVWNLGQISRSKQERVF 93 (330)
Q Consensus 24 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~ 93 (330)
+.|.++|..+.+....+.... . . .++++| +++.++++. .++.|.++|..+ .+....+
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~-------~-P-gia~Sp-Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t---~~vv~~I 165 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGF-------L-P-HPVAAE-DGSFFAQASTVFERIARGKRTDYVEVFDPVT---FLPIADI 165 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECS-------S-C-EEEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTT---CCEEEEE
T ss_pred CeEEEEECCCCEEEEEEECCC-------C-C-ceEECC-CCCEEEEEeccccccccCCCCCEEEEEECCC---CcEEEEE
Confidence 799999999988876655432 1 2 689999 888887775 367899999988 5555554
Q ss_pred ccc-------ccceeEEEEEecCCCEEEEEec--CCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCc
Q psy6213 94 NDH-------KRTVNKVSFHYVESNWLISGSQ--DGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGT 164 (330)
Q Consensus 94 ~~~-------~~~i~~i~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~ 164 (330)
.-. ......+.++| ++++++++.. ++.|.+.|+.+++.+..+.... +....|+++..+++.+.||.
T Consensus 166 ~v~g~~r~~~g~~P~~~~~sp-DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g----~~~~~p~g~~~~v~~~~dG~ 240 (426)
T 3c75_H 166 ELPDAPRFLVGTYQWMNALTP-DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD----CYHIFPASPTVFYMNCRDGS 240 (426)
T ss_dssp EETTCCCCCBSCCGGGSEECT-TSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----EEEEEEEETTEEEEEETTSS
T ss_pred ECCCccccccCCCcceEEEcC-CCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC----ceeeccCCCcEEEEEcCCCC
Confidence 321 13456789998 8888888764 5789999999999888877432 13455666556778888898
Q ss_pred EEEEecCCCcccee----eeccCCCCe-EEEEEcCCCCEEEEEecCCcEEEEeCCCCccccc-e--------ec---ccc
Q psy6213 165 IQQWDVRRPEKCFY----QFTAHSGPI-FACDWHPEHAWLATASRDKTIKVWDLSIKPSLEY-S--------IN---TIA 227 (330)
Q Consensus 165 i~i~d~~~~~~~~~----~~~~~~~~i-~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~-~--------~~---~~~ 227 (330)
+.+.+..+ .+... .+.....++ ..+.+.+++..++.....+.+.+.|......... . .. ...
T Consensus 241 ~~~V~~~~-~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~ 319 (426)
T 3c75_H 241 LARVDFAD-GETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPG 319 (426)
T ss_dssp EEEEECCT-TCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEEC
T ss_pred EEEEECCC-CcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccC
Confidence 88888843 33321 122112222 2456789888887778889999999865422100 0 00 011
Q ss_pred ceEEEEEcCCCCeEEEEeecc-------cCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCC-EEEEee-cCCeEee
Q psy6213 228 SVSRIKWRPQRKFHLASCSLV-------VDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQ-LFIASS-RVSIIPR 298 (330)
Q Consensus 228 ~v~~~~~~~~~~~l~~~~~~~-------~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~-~dg~i~i 298 (330)
....++++|+++.++++.... ..+.|.++|..+.+. +..+.. .....+++|+||++ +++++. .++.|.+
T Consensus 320 g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv-v~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~VsV 397 (426)
T 3c75_H 320 GWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGER-INKIEL-GHEIDSINVSQDAEPLLYALSAGTQTLHI 397 (426)
T ss_dssp SSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE-EEEEEE-EEEECEEEECCSSSCEEEEEETTTTEEEE
T ss_pred CceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeE-EEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCeEEE
Confidence 222368999999877765310 135799999999876 555543 23588999999999 888887 5899999
Q ss_pred eecc
Q psy6213 299 AKNI 302 (330)
Q Consensus 299 w~~~ 302 (330)
++..
T Consensus 398 ID~~ 401 (426)
T 3c75_H 398 YDAA 401 (426)
T ss_dssp EETT
T ss_pred EECC
Confidence 9754
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.63 E-value=6.7e-14 Score=115.62 Aligned_cols=271 Identities=10% Similarity=0.079 Sum_probs=166.7
Q ss_pred ccceEEEEeeCCCeeec-C---CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcC-----CCc
Q psy6213 5 SPVHKHGLKADNGLAQP-S---RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGAT-----NGA 75 (330)
Q Consensus 5 ~~v~~~~~s~~~~~~~~-g---d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----dg~ 75 (330)
..+..++++|+|+++++ . ++.++||.+.+++.. .+.............+..+++++ +++++++-.. ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~-~g~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDG-NGIVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECS-SSEEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcC-CCcEEEEcCCCCcCCCCe
Confidence 35788999999999444 2 443666766554432 22110001111223468999999 7776665543 578
Q ss_pred EEEEECCCCCCCceeEEecc------cccceeEEEEEecCCCEEEEEe---cCCcEEEEEeecCceeeeeecCCCCeE-E
Q psy6213 76 VVVWNLGQISRSKQERVFND------HKRTVNKVSFHYVESNWLISGS---QDGTMRLFDIRCQESTKIFHSNTESVR-D 145 (330)
Q Consensus 76 i~iw~~~~~~~~~~~~~~~~------~~~~i~~i~~~~~~~~~l~~~~---~d~~i~i~d~~~~~~~~~~~~~~~~v~-~ 145 (330)
|.+||+.+ .+....+.. +......+++.|.++..+++.. .++.|.+||+.+++..+.+..|..... .
T Consensus 95 i~~~d~~t---g~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~ 171 (343)
T 2qe8_A 95 LVAWDTLN---NQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPED 171 (343)
T ss_dssp EEEEETTT---TEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCS
T ss_pred EEEEECCC---CeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccc
Confidence 99999987 454444432 2235689999973455555655 678999999988877666644322110 1
Q ss_pred EEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCC-cEEEEeCC---CCc----
Q psy6213 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDK-TIKVWDLS---IKP---- 217 (330)
Q Consensus 146 ~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-~i~i~d~~---~~~---- 217 (330)
..+.+++. .+.+.+.+|.++.|. ..+..++|+|+++.|+.+..++ .+..++.. ...
T Consensus 172 ~~~~~~g~-~~~~~~~~g~~~~~~---------------~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~ 235 (343)
T 2qe8_A 172 IDLVIDGV-PVQIGQPDGTVIRPH---------------LGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDA 235 (343)
T ss_dssp CCCEETTE-ECBEECTTSCEECCC---------------CCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHH
T ss_pred cceeECCE-EEEeccCCCceecee---------------cccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChh
Confidence 33444554 355566666654442 2467899999999888887766 45444432 110
Q ss_pred ccc---ceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEee-cCCCCeEEEEEecCCCEEEEeecC
Q psy6213 218 SLE---YSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFT-EHKDVVSGLAWRGDPQLFIASSRV 293 (330)
Q Consensus 218 ~~~---~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d 293 (330)
... ...........++++++|.. +++.. .++.|.+||..+++. ..... .+...+.++++.++++++++.+..
T Consensus 236 ~~~~~~~~~g~~g~pdgia~d~~G~l-~va~~--~~~~V~~~d~~~G~~-~~~~~~~~~~~p~~va~~~~g~l~v~~~~~ 311 (343)
T 2qe8_A 236 ELGSKIERYSEKPICDGISIDKDHNI-YVGDL--AHSAIGVITSADRAY-KLLVTDEKLSWTDSFNFGSDGYLYFDCNQL 311 (343)
T ss_dssp HHHTTCEEEEECCSCSCEEECTTCCE-EEEEG--GGTEEEEEETTTTEE-EEEEECGGGSCEEEEEECTTSCEEEEECCG
T ss_pred hhhcceEecccCCCCceEEECCCCCE-EEEcc--CCCeEEEEECCCCCE-EEEEECCceecCCeeEECCCCcEEEEeCcc
Confidence 000 11122335667999999985 55555 589999999844542 22222 224568999999999988888777
Q ss_pred CeEeeee
Q psy6213 294 SIIPRAK 300 (330)
Q Consensus 294 g~i~iw~ 300 (330)
+.+.+|.
T Consensus 312 ~~~~~f~ 318 (343)
T 2qe8_A 312 HHSAPLN 318 (343)
T ss_dssp GGSGGGB
T ss_pred ccccccc
Confidence 6666554
No 214
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.63 E-value=1.9e-14 Score=118.96 Aligned_cols=175 Identities=11% Similarity=0.050 Sum_probs=131.4
Q ss_pred ceeeeeecccCCcEEEEEcCCCcEEEEECCCCC--------CCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEE
Q psy6213 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQIS--------RSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124 (330)
Q Consensus 53 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~--------~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i 124 (330)
+++.+++++ ...++++|+.++ +.+|++.... ..+.... ..+.. |..++| ++++|+++ .++.|++
T Consensus 39 ~~nlLais~-~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~-~~lp~-V~~l~f---d~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISN-SKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWE-KEIPD-VIFVCF---HGDQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEET-TTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEE-EECTT-EEEEEE---ETTEEEEE-ESSEEEE
T ss_pred cccEEEEcC-CCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEE-eeCCC-eeEEEE---CCCEEEEE-cCCcEEE
Confidence 368999999 889999999875 6679875421 0111122 23556 999999 57888888 7899999
Q ss_pred EEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEec
Q psy6213 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASR 204 (330)
Q Consensus 125 ~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 204 (330)
||+.+.........+..++.++.+.+.. ++++..||.|.+||+.+.. ... +...|++++|+|+| ++.|..
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p~---~av~~~dG~L~v~dl~~~~-~~~----~~~~Vs~v~WSpkG--~~vg~~ 180 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNNT---LVILNSVNDLSALDLRTKS-TKQ----LAQNVTSFDVTNSQ--LAVLLK 180 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSSE---EEEEETTSEEEEEETTTCC-EEE----EEESEEEEEECSSE--EEEEET
T ss_pred EEchhhhccCccceeecceeeEEecCCC---EEEEECCCCEEEEEccCCc-ccc----ccCCceEEEEcCCc--eEEEEc
Confidence 9998877666666677788888776542 7888999999999998633 221 45689999999999 678999
Q ss_pred CCcEEEEeCCCCcc--ccce---------eccccceEEEEEcCCCCeEEEEe
Q psy6213 205 DKTIKVWDLSIKPS--LEYS---------INTIASVSRIKWRPQRKFHLASC 245 (330)
Q Consensus 205 dg~i~i~d~~~~~~--~~~~---------~~~~~~v~~~~~~~~~~~l~~~~ 245 (330)
||.+++|+....+. .... ..+...|.++.|.+++.++++-.
T Consensus 181 dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 181 DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 99999998877642 1111 12568899999999999866543
No 215
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.62 E-value=3.7e-12 Score=104.37 Aligned_cols=221 Identities=11% Similarity=0.042 Sum_probs=145.7
Q ss_pred eeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceee
Q psy6213 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTK 134 (330)
Q Consensus 55 ~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 134 (330)
...+|+|+++.++++...++.|..||..+ .+. ..+. ....+.++.++| +++++++. .+ .|.+||..+++...
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~---~~~-~~~~-~~~~v~~i~~~~-dg~l~v~~-~~-gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLAS---GRK-TVHA-LPFMGSALAKIS-DSKQLIAS-DD-GLFLRDTATGVLTL 123 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTT---TEE-EEEE-CSSCEEEEEEEE-TTEEEEEE-TT-EEEEEETTTCCEEE
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCC---CcE-EEEE-CCCcceEEEEeC-CCeEEEEE-CC-CEEEEECCCCcEEE
Confidence 57889994466777777788999999876 322 2222 346789999998 77766654 44 59999988776543
Q ss_pred eeec----CCCCeEEEEEcCCCCcEEEEEec------CCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEE-e
Q psy6213 135 IFHS----NTESVRDVEFNPHSPYAFASVSE------NGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATA-S 203 (330)
Q Consensus 135 ~~~~----~~~~v~~~~~~~~~~~~~~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~ 203 (330)
.... ....+..++++|+|+ ++++... .+.|..++ + ++. ..+..+......++|+|+++.++.+ +
T Consensus 124 ~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~-g~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~ 198 (326)
T 2ghs_A 124 HAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--K-GKV-TKLFADISIPNSICFSPDGTTGYFVDT 198 (326)
T ss_dssp EECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--T-TEE-EEEEEEESSEEEEEECTTSCEEEEEET
T ss_pred EeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--C-CcE-EEeeCCCcccCCeEEcCCCCEEEEEEC
Confidence 2221 123588999999998 4554432 24566666 3 332 2232333457899999999876555 4
Q ss_pred cCCcEEEEeCC--CC-ccc--cce--e-ccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCe
Q psy6213 204 RDKTIKVWDLS--IK-PSL--EYS--I-NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVV 275 (330)
Q Consensus 204 ~dg~i~i~d~~--~~-~~~--~~~--~-~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v 275 (330)
.++.|.+||+. ++ ... ... . .....+..++++++|.. .++.. .++.|..||. +++. +..+..+...+
T Consensus 199 ~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~l-wva~~--~~~~v~~~d~-~g~~-~~~i~~~~~~~ 273 (326)
T 2ghs_A 199 KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHI-WNARW--GEGAVDRYDT-DGNH-IARYEVPGKQT 273 (326)
T ss_dssp TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCE-EEEEE--TTTEEEEECT-TCCE-EEEEECSCSBE
T ss_pred CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCE-EEEEe--CCCEEEEECC-CCCE-EEEEECCCCCc
Confidence 56889999986 43 211 111 1 12345788999999985 44443 3789999998 4443 55666666679
Q ss_pred EEEEEe-cCCCEEEEeecC
Q psy6213 276 SGLAWR-GDPQLFIASSRV 293 (330)
Q Consensus 276 ~~~~~~-~~~~~l~s~~~d 293 (330)
.+++|+ |+++.|+.++..
T Consensus 274 ~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 274 TCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp EEEEEESTTSCEEEEEEBC
T ss_pred EEEEEecCCCCEEEEEecC
Confidence 999998 888777655443
No 216
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.61 E-value=5.6e-14 Score=116.12 Aligned_cols=172 Identities=11% Similarity=0.084 Sum_probs=129.6
Q ss_pred ceeEEEEEecCCCEEEEEecCCcEEEEEeecCc-----------eeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEE
Q psy6213 99 TVNKVSFHYVESNWLISGSQDGTMRLFDIRCQE-----------STKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQ 167 (330)
Q Consensus 99 ~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i 167 (330)
+++.+++++ ...++++|+.+ .+.+|+++..+ ..... .... |+.++| ++. .++++ .++.|++
T Consensus 39 ~~nlLais~-~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~-~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISN-SKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGD-QVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEET-TTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETT-EEEEE-ESSEEEE
T ss_pred cccEEEEcC-CCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCC-EEEEE-cCCcEEE
Confidence 688999997 88889999987 56779876443 11222 3555 999999 776 46666 8899999
Q ss_pred EecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeec
Q psy6213 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSL 247 (330)
Q Consensus 168 ~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 247 (330)
||+++.. .......|...+.++.+.+. .+++++.||.+.+||+.++... .....|++++|+|+| ++++.
T Consensus 111 ~dv~sl~-~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~----~~~~~Vs~v~WSpkG--~~vg~-- 179 (388)
T 1xip_A 111 LDLEELS-EFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTK----QLAQNVTSFDVTNSQ--LAVLL-- 179 (388)
T ss_dssp EESSSTT-CEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEE----EEEESEEEEEECSSE--EEEEE--
T ss_pred EEchhhh-ccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCccc----cccCCceEEEEcCCc--eEEEE--
Confidence 9998743 44455667778888877654 3888999999999999977442 245689999999999 35555
Q ss_pred ccCCeEEEEEccCCCcc-ceEe------e---cCCCCeEEEEEecCCCEEEEe
Q psy6213 248 VVDSSVNVWDIRRPYIP-LASF------T---EHKDVVSGLAWRGDPQLFIAS 290 (330)
Q Consensus 248 ~~~~~i~i~d~~~~~~~-~~~~------~---~~~~~v~~~~~~~~~~~l~s~ 290 (330)
.||.+++|+....... ...+ . +|...|.++.|.+++.++++-
T Consensus 180 -~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 180 -KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp -TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred -cCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 4999999988776521 2233 2 367889999999999988874
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.60 E-value=4.4e-12 Score=103.89 Aligned_cols=219 Identities=9% Similarity=0.055 Sum_probs=142.3
Q ss_pred eEEEEeeCCCe-eecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCC
Q psy6213 8 HKHGLKADNGL-AQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQI 84 (330)
Q Consensus 8 ~~~~~s~~~~~-~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 84 (330)
.+..|+|++.. +.++ ++.|..|+.++++... +.. ...+.+++|+| +++++++. .+ .|.+||..+
T Consensus 52 egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~~--------~~~v~~i~~~~-dg~l~v~~-~~-gl~~~d~~~- 118 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILERELHELHLASGRKTV-HAL--------PFMGSALAKIS-DSKQLIAS-DD-GLFLRDTAT- 118 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EEC--------SSCEEEEEEEE-TTEEEEEE-TT-EEEEEETTT-
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EEC--------CCcceEEEEeC-CCeEEEEE-CC-CEEEEECCC-
Confidence 57889998555 5555 8899999998765432 211 12368899999 88777654 44 499999876
Q ss_pred CCCceeEEecc----cccceeEEEEEecCCCEEEEEec------CCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCc
Q psy6213 85 SRSKQERVFND----HKRTVNKVSFHYVESNWLISGSQ------DGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPY 154 (330)
Q Consensus 85 ~~~~~~~~~~~----~~~~i~~i~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 154 (330)
.+....... ....+..++++| +++++++... .+.|..++ +++.. .+.........++|+|+++.
T Consensus 119 --g~~~~~~~~~~~~~~~~~~~i~~d~-~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~ 192 (326)
T 2ghs_A 119 --GVLTLHAELESDLPGNRSNDGRMHP-SGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFSPDGTT 192 (326)
T ss_dssp --CCEEEEECSSTTCTTEEEEEEEECT-TSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEECTTSCE
T ss_pred --CcEEEEeeCCCCCCCCCCCCEEECC-CCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCE
Confidence 332222111 124688999998 7776665432 23455555 44433 23223345678999999986
Q ss_pred EEEEEecCCcEEEEecC--CC-c----cceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceecccc
Q psy6213 155 AFASVSENGTIQQWDVR--RP-E----KCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA 227 (330)
Q Consensus 155 ~~~~~~~dg~i~i~d~~--~~-~----~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 227 (330)
++++.+.++.|.+||+. ++ . .....+......+..++++++|.+.++...++.|..||.. ++..........
T Consensus 193 lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~~~~~i~~~~~ 271 (326)
T 2ghs_A 193 GYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GNHIARYEVPGK 271 (326)
T ss_dssp EEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT-CCEEEEEECSCS
T ss_pred EEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CCEEEEEECCCC
Confidence 56666667899999986 32 1 1122222234567889999999877777677889999984 433333333445
Q ss_pred ceEEEEEc-CCCCeEEEEee
Q psy6213 228 SVSRIKWR-PQRKFHLASCS 246 (330)
Q Consensus 228 ~v~~~~~~-~~~~~l~~~~~ 246 (330)
.+++++|+ |++..|+++..
T Consensus 272 ~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 272 QTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp BEEEEEEESTTSCEEEEEEB
T ss_pred CcEEEEEecCCCCEEEEEec
Confidence 79999998 88887766665
No 218
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.59 E-value=3.7e-13 Score=121.54 Aligned_cols=236 Identities=10% Similarity=0.089 Sum_probs=155.1
Q ss_pred cceeeeeecccCCcEEEEE-----cCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCC------
Q psy6213 52 FSCNDVAWSCIEENHIATG-----ATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDG------ 120 (330)
Q Consensus 52 ~~v~~~~~~~~~~~~l~~~-----~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~------ 120 (330)
..+..++||| ++++||.+ +....|++||+.+ ++.... .........++|+ +++.|+.++.+.
T Consensus 129 ~~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~t---g~~~~~-~~~~~k~~~~~Ws--Dg~~l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 129 TALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVES---KQPLET-PLKDVKFSGISWL--GNEGFFYSSYDKPDGSEL 201 (693)
T ss_dssp CEEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTT---CSEEEE-EEEEEESCCCEEE--TTTEEEEEESSCCC----
T ss_pred EEEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCC---CCCCcc-ccCCceeccEEEe--CCCEEEEEEecCcccccc
Confidence 4578899999 99988843 2235699999988 443322 1111123577899 667777776663
Q ss_pred -------cEEEEEeecCce--eeeee--c-CCCCeEEEEEcCCCCcEEEEEecC---CcEEEEecCCCccceeeeccCCC
Q psy6213 121 -------TMRLFDIRCQES--TKIFH--S-NTESVRDVEFNPHSPYAFASVSEN---GTIQQWDVRRPEKCFYQFTAHSG 185 (330)
Q Consensus 121 -------~i~i~d~~~~~~--~~~~~--~-~~~~v~~~~~~~~~~~~~~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~ 185 (330)
.|++|++.++.. ...+. . +......+.|+|++++++++...+ ..|+++|+.++......+..+..
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~ 281 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD 281 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC
Confidence 399999876643 22232 2 334578899999999866665533 58999999875445556666666
Q ss_pred CeEEEEEcCCCCEEEEEe-cC---CcEEEEeCCCCcc--ccceeccccceEEEEEcCCCCeEEEEeecccCC--eEEEEE
Q psy6213 186 PIFACDWHPEHAWLATAS-RD---KTIKVWDLSIKPS--LEYSINTIASVSRIKWRPQRKFHLASCSLVVDS--SVNVWD 257 (330)
Q Consensus 186 ~i~~~~~~~~~~~l~~~~-~d---g~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~--~i~i~d 257 (330)
..... ++++|..|+..+ .+ +.|..+|+.++.. ......+...+. .|++++++|++... .++ .|++||
T Consensus 282 ~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~--~~g~~~l~~~d 356 (693)
T 3iuj_A 282 ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYM--VDATARVEQFD 356 (693)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEE--ETTEEEEEEEC
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEE--ECCeeEEEEEE
Confidence 55555 666666555444 33 5799999987643 233444544444 89999998777776 455 688898
Q ss_pred ccCCCccceEee-cCCCCeEEEEEecCCCEEEEeecC----CeEeeeec
Q psy6213 258 IRRPYIPLASFT-EHKDVVSGLAWRGDPQLFIASSRV----SIIPRAKN 301 (330)
Q Consensus 258 ~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d----g~i~iw~~ 301 (330)
+.... ...+. ...+.+..+.++|++..|+....+ +.++.|+.
T Consensus 357 ~~g~~--~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 357 YEGKR--VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp TTSCE--EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred CCCCe--eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence 87543 33333 234567788888888877766554 77888764
No 219
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.57 E-value=3.8e-12 Score=105.61 Aligned_cols=261 Identities=14% Similarity=0.100 Sum_probs=164.7
Q ss_pred CeEEEEEcCC-----cceeeeeceeecc-c-----cccccceeeeeec--ccCCcEE-EEEcCCCcEEEEECCCC-CCCc
Q psy6213 24 NVFKIFLIKD-----TEFVETHNLRVGK-N-----INLNFSCNDVAWS--CIEENHI-ATGATNGAVVVWNLGQI-SRSK 88 (330)
Q Consensus 24 ~~i~iw~~~~-----~~~~~~~~~~~~~-~-----~~~~~~v~~~~~~--~~~~~~l-~~~~~dg~i~iw~~~~~-~~~~ 88 (330)
..+.+.|++. ++.+......... . .....++.+..++ + ++++| +.+..++.|.++|+.+. .+.+
T Consensus 43 d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~-~r~~l~v~~l~s~~I~viD~~t~p~~p~ 121 (462)
T 2ece_A 43 DFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNI-ERRFLIVPGLRSSRIYIIDTKPNPREPK 121 (462)
T ss_dssp CEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTC-CSCEEEEEBTTTCCEEEEECCSCTTSCE
T ss_pred CeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCc-cCCEEEEccCCCCeEEEEECCCCCCCce
Confidence 3566777765 5555544433311 1 1112233444556 6 55554 55667889999999752 2345
Q ss_pred eeEEec-------ccccceeEEEEEecCCCEEEEEecC------CcEEEEEeecCceeeeeecCCC---CeEEEEEcCCC
Q psy6213 89 QERVFN-------DHKRTVNKVSFHYVESNWLISGSQD------GTMRLFDIRCQESTKIFHSNTE---SVRDVEFNPHS 152 (330)
Q Consensus 89 ~~~~~~-------~~~~~i~~i~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~~---~v~~~~~~~~~ 152 (330)
..+++. .....-..+...| ++ +++++..+ |.|.++|.++.+.+..+..... .-..+.|+|++
T Consensus 122 ~~k~ie~~~~~~~~g~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~ 199 (462)
T 2ece_A 122 IIKVIEPEEVKKVSGYSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPN 199 (462)
T ss_dssp EEEEECHHHHHHHHCEEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTT
T ss_pred eeeeechhhcccccCCCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCC
Confidence 555552 0112445677788 66 77766655 7899999999999888863322 23468889999
Q ss_pred CcEEEEEe-------------------cCCcEEEEecCCCccceeeeccC--CCCeEEEEE--cCCCCEEEEEec-----
Q psy6213 153 PYAFASVS-------------------ENGTIQQWDVRRPEKCFYQFTAH--SGPIFACDW--HPEHAWLATASR----- 204 (330)
Q Consensus 153 ~~~~~~~~-------------------~dg~i~i~d~~~~~~~~~~~~~~--~~~i~~~~~--~~~~~~l~~~~~----- 204 (330)
+ .+++.. .+.+|.+||+.+ .+.+.++... ......+.| +|+++++.+++.
T Consensus 200 ~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~-~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~ 277 (462)
T 2ece_A 200 E-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK-RKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKD 277 (462)
T ss_dssp T-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT-TEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTT
T ss_pred C-EEEEccCcCccccccccchhhhhhccCCEEEEEECCC-CcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccC
Confidence 8 466653 368899999997 5556555542 123445555 999998877774
Q ss_pred -CCcEEEEeCCCCcc--cc----------ceec--------cccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCc
Q psy6213 205 -DKTIKVWDLSIKPS--LE----------YSIN--------TIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYI 263 (330)
Q Consensus 205 -dg~i~i~d~~~~~~--~~----------~~~~--------~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~ 263 (330)
+++|.+|....+.. .. .... .......+.++|||++|+++.- ..+.|.+||+.....
T Consensus 278 Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnr--g~d~VavfdV~d~~~ 355 (462)
T 2ece_A 278 LSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLW--GIGEVRQYDISNPFK 355 (462)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEET--TTTEEEEEECSSTTS
T ss_pred CCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeC--CCCEEEEEEecCCCC
Confidence 56787665443210 00 0000 0245788999999999888887 689999999964432
Q ss_pred --cceEeecCC--------------CCeEEEEEecCCCEEEEee
Q psy6213 264 --PLASFTEHK--------------DVVSGLAWRGDPQLFIASS 291 (330)
Q Consensus 264 --~~~~~~~~~--------------~~v~~~~~~~~~~~l~s~~ 291 (330)
.+..+.... +....++++|||++|+++.
T Consensus 356 ~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 356 PVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred cEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 122222110 1358899999999999987
No 220
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.57 E-value=2.6e-12 Score=107.65 Aligned_cols=247 Identities=14% Similarity=0.104 Sum_probs=162.4
Q ss_pred EEEEeeCCCe-eecC-----------CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcC--CC
Q psy6213 9 KHGLKADNGL-AQPS-----------RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGAT--NG 74 (330)
Q Consensus 9 ~~~~s~~~~~-~~~g-----------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--dg 74 (330)
.++++|||++ +++. ++.|.++|..+.+....+................++|+| ++++++++.. ++
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~sp-DGk~lyV~n~~~~~ 200 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTP-DNKNLLFYQFSPAP 200 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECT-TSSEEEEEECSSSC
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEecCCCC
Confidence 7999999998 3331 468999999998887766543111000001126789999 9998888764 57
Q ss_pred cEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeee----eecCCCCe-EEEEEc
Q psy6213 75 AVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKI----FHSNTESV-RDVEFN 149 (330)
Q Consensus 75 ~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~----~~~~~~~v-~~~~~~ 149 (330)
.|.+.|+.+ .+.+..+.... +....|.+...+++.+.||.+.+.+..+++.... +.....++ ..+.+.
T Consensus 201 ~VsVID~~t---~kvv~~I~v~g----~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~ 273 (426)
T 3c75_H 201 AVGVVDLEG---KTFDRMLDVPD----CYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFS 273 (426)
T ss_dssp EEEEEETTT---TEEEEEEECCS----EEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEEC
T ss_pred eEEEEECCC---CeEEEEEEcCC----ceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeec
Confidence 899999998 66666655321 1234454557777888899998888865554421 22222222 235678
Q ss_pred CCCCcEEEEEecCCcEEEEecCCCccce-eeec----------cCCCCeEEEEEcCCCCEEEEEec----------CCcE
Q psy6213 150 PHSPYAFASVSENGTIQQWDVRRPEKCF-YQFT----------AHSGPIFACDWHPEHAWLATASR----------DKTI 208 (330)
Q Consensus 150 ~~~~~~~~~~~~dg~i~i~d~~~~~~~~-~~~~----------~~~~~i~~~~~~~~~~~l~~~~~----------dg~i 208 (330)
+++.. ++.....+.+.+.|+......+ ..+. ........++++|+++.+++... ++.|
T Consensus 274 ~dg~~-~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~V 352 (426)
T 3c75_H 274 LRSGR-LVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFV 352 (426)
T ss_dssp TTTCE-EEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEE
T ss_pred CCCCE-EEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEE
Confidence 88885 4455678899999986522111 1111 01122234789999887776642 3579
Q ss_pred EEEeCCCCccccceeccccceEEEEEcCCCC-eEEEEeecccCCeEEEEEccCCCccceEe
Q psy6213 209 KVWDLSIKPSLEYSINTIASVSRIKWRPQRK-FHLASCSLVVDSSVNVWDIRRPYIPLASF 268 (330)
Q Consensus 209 ~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~~~~i~i~d~~~~~~~~~~~ 268 (330)
.++|..+.+.+.. .........++|+||++ .++++.. .++.|.++|+.+.+. +..+
T Consensus 353 sVID~~T~kvv~~-I~vg~~P~gia~spDg~~~lyv~n~--~s~~VsVID~~t~kv-v~tI 409 (426)
T 3c75_H 353 VVLNAETGERINK-IELGHEIDSINVSQDAEPLLYALSA--GTQTLHIYDAATGEE-LRSV 409 (426)
T ss_dssp EEEETTTCCEEEE-EEEEEEECEEEECCSSSCEEEEEET--TTTEEEEEETTTCCE-EEEE
T ss_pred EEEECCCCeEEEE-EECCCCcCeEEEccCCCEEEEEEcC--CCCeEEEEECCCCCE-EEEe
Confidence 9999999855443 34445789999999999 6666654 489999999999876 5554
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.55 E-value=2.1e-12 Score=104.80 Aligned_cols=225 Identities=9% Similarity=0.032 Sum_probs=149.1
Q ss_pred eeeeeecccCCc-EEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCce
Q psy6213 54 CNDVAWSCIEEN-HIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQES 132 (330)
Q Consensus 54 v~~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (330)
.....|+| +++ ++++...++.|..|+... . ...+..+...+..+++++ +++++++...++.|..|+.+ ++.
T Consensus 47 ~egp~~~~-~g~~l~~~d~~~~~i~~~~~~g----~-~~~~~~~~~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 47 SEGPAWWE-AQRTLVWSDLVGRRVLGWREDG----T-VDVLLDATAFTNGNAVDA-QQRLVHCEHGRRAITRSDAD-GQA 118 (305)
T ss_dssp EEEEEEEG-GGTEEEEEETTTTEEEEEETTS----C-EEEEEESCSCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCE
T ss_pred ccCCeEeC-CCCEEEEEECCCCEEEEEeCCC----C-EEEEeCCCCccceeeECC-CCCEEEEECCCCEEEEECCC-CCE
Confidence 36789999 666 677777889999998732 2 234445567789999998 78866665556789999975 543
Q ss_pred eeeeec----CCCCeEEEEEcCCCCcEEEE----Eec-------------CCcEEEEecCCCccceeeeccCCCCeEEEE
Q psy6213 133 TKIFHS----NTESVRDVEFNPHSPYAFAS----VSE-------------NGTIQQWDVRRPEKCFYQFTAHSGPIFACD 191 (330)
Q Consensus 133 ~~~~~~----~~~~v~~~~~~~~~~~~~~~----~~~-------------dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~ 191 (330)
...... ....+..++++|+|. ++++ |.. .+.|+.+|..+ ++... +. .......++
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~-g~~~~-~~-~~~~p~gl~ 194 (305)
T 3dr2_A 119 HLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDG-SPLQR-MA-DLDHPNGLA 194 (305)
T ss_dssp EEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSS-CCCEE-EE-EESSEEEEE
T ss_pred EEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCC-CcEEE-Ee-cCCCCcceE
Confidence 222111 113467899999998 5654 321 25678888765 22222 22 345678899
Q ss_pred EcCCCCEEEEEecC------CcEEEEeCCCCcc---ccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCC
Q psy6213 192 WHPEHAWLATASRD------KTIKVWDLSIKPS---LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY 262 (330)
Q Consensus 192 ~~~~~~~l~~~~~d------g~i~i~d~~~~~~---~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~ 262 (330)
|+|+++.|+.+... +.|.+||+..... .............++++++|+ +.++.. + .|.+|+.. ++
T Consensus 195 ~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~---~-gv~~~~~~-g~ 268 (305)
T 3dr2_A 195 FSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW-LWSSSG---T-GVCVFDSD-GQ 268 (305)
T ss_dssp ECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC-EEECCS---S-EEEEECTT-SC
T ss_pred EcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC-EEEecC---C-cEEEECCC-CC
Confidence 99999988777665 6899999875421 000001123456789999998 455543 4 49999984 43
Q ss_pred ccceEeecCCCCeEEEEEecCCCEEEEeecCCeEee
Q psy6213 263 IPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPR 298 (330)
Q Consensus 263 ~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i 298 (330)
. +..+..+. .+.+++|+|+++.|..++.++..++
T Consensus 269 ~-~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 269 L-LGHIPTPG-TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp E-EEEEECSS-CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred E-EEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 3 45555444 5889999999998888887764444
No 222
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.50 E-value=1.7e-11 Score=99.53 Aligned_cols=221 Identities=8% Similarity=-0.020 Sum_probs=138.6
Q ss_pred ccceEEEEeeCCCe-eecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEEC
Q psy6213 5 SPVHKHGLKADNGL-AQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNL 81 (330)
Q Consensus 5 ~~v~~~~~s~~~~~-~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~ 81 (330)
.......|+|+|+. +.++ ++.|..|+. +++. ..+.... ..+..+++++ +++++++...++.|..|+.
T Consensus 45 ~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-~~~~~~~-------~~~~gl~~d~-dG~l~v~~~~~~~v~~~~~ 114 (305)
T 3dr2_A 45 TWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-DVLLDAT-------AFTNGNAVDA-QQRLVHCEHGRRAITRSDA 114 (305)
T ss_dssp SSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-EEEEESC-------SCEEEEEECT-TSCEEEEETTTTEEEEECT
T ss_pred cCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-EEEeCCC-------CccceeeECC-CCCEEEEECCCCEEEEECC
Confidence 34567899999994 4455 899999987 4443 2222211 1258899999 8887776666678999987
Q ss_pred CCCCCCceeE-Eeccc-ccceeEEEEEecCCCEEEE----Eec-------------CCcEEEEEeecCceeeeeecCCCC
Q psy6213 82 GQISRSKQER-VFNDH-KRTVNKVSFHYVESNWLIS----GSQ-------------DGTMRLFDIRCQESTKIFHSNTES 142 (330)
Q Consensus 82 ~~~~~~~~~~-~~~~~-~~~i~~i~~~~~~~~~l~~----~~~-------------d~~i~i~d~~~~~~~~~~~~~~~~ 142 (330)
+. . ..... ..... ...+..+++.| +++++++ |.. .+.|+.+|..+++..... ....
T Consensus 115 ~g-~-~~~~~~~~~~~~~~~~~~i~~d~-dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~ 189 (305)
T 3dr2_A 115 DG-Q-AHLLVGRYAGKRLNSPNDLIVAR-DGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH 189 (305)
T ss_dssp TS-C-EEEEECEETTEECSCCCCEEECT-TSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS
T ss_pred CC-C-EEEEEeccCCCccCCCCCEEECC-CCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC
Confidence 52 1 11111 11111 13467899998 8887776 331 246777777666544333 3345
Q ss_pred eEEEEEcCCCCcEEEEEecC------CcEEEEecCCCcc-ceeee-ccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCC
Q psy6213 143 VRDVEFNPHSPYAFASVSEN------GTIQQWDVRRPEK-CFYQF-TAHSGPIFACDWHPEHAWLATASRDKTIKVWDLS 214 (330)
Q Consensus 143 v~~~~~~~~~~~~~~~~~~d------g~i~i~d~~~~~~-~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~ 214 (330)
...++|+|+++. ++.+... +.|.+|++..... ....+ ....+....++++++|++. +++.+ .|.+||..
T Consensus 190 p~gl~~spdg~~-lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~~~-gv~~~~~~ 266 (305)
T 3dr2_A 190 PNGLAFSPDEQT-LYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLW-SSSGT-GVCVFDSD 266 (305)
T ss_dssp EEEEEECTTSSE-EEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEE-ECCSS-EEEEECTT
T ss_pred CcceEEcCCCCE-EEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEE-EecCC-cEEEECCC
Confidence 678999999985 4444443 7899999875320 00111 1123456678999999944 44454 49999985
Q ss_pred CCccccceeccccceEEEEEcCCCCeEEEEe
Q psy6213 215 IKPSLEYSINTIASVSRIKWRPQRKFHLASC 245 (330)
Q Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 245 (330)
.. ..... .....+..++|+|+++.|+++.
T Consensus 267 g~-~~~~~-~~~~~~~~~~f~~d~~~L~it~ 295 (305)
T 3dr2_A 267 GQ-LLGHI-PTPGTASNCTFDQAQQRLFITG 295 (305)
T ss_dssp SC-EEEEE-ECSSCCCEEEECTTSCEEEEEE
T ss_pred CC-EEEEE-ECCCceeEEEEeCCCCEEEEEc
Confidence 43 33222 2233688999999998866665
No 223
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.48 E-value=6.4e-12 Score=103.59 Aligned_cols=250 Identities=8% Similarity=-0.105 Sum_probs=162.9
Q ss_pred eEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEc----------CCCcEEEEECCCCCCCceeEEec
Q psy6213 25 VFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGA----------TNGAVVVWNLGQISRSKQERVFN 94 (330)
Q Consensus 25 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~----------~dg~i~iw~~~~~~~~~~~~~~~ 94 (330)
.|.++|.++++.+..+..... . .+.++| ++++++++. .++.|.+||+.+ .+....+.
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~--------P-~i~~sp-Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T---~~vv~~I~ 113 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFL--------S-LAVAGH-SGSDFALASTSFARSAKGKRTDYVEVFDPVT---FLPIADIE 113 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTT--------C-EEEECT-TSSCEEEEEEEETTTTSSSEEEEEEEECTTT---CCEEEEEE
T ss_pred eEEEEECCCCeEEEEEeCCCC--------C-ceEECC-CCCEEEEEcccccccccCCCCCEEEEEECCC---CCEEEEEE
Confidence 888999999988776543321 2 689999 888888775 367899999998 66666664
Q ss_pred cc-------ccceeEEEEEecCCCEEEEEec--CCcEEE--EEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCC
Q psy6213 95 DH-------KRTVNKVSFHYVESNWLISGSQ--DGTMRL--FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENG 163 (330)
Q Consensus 95 ~~-------~~~i~~i~~~~~~~~~l~~~~~--d~~i~i--~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg 163 (330)
.. ......+.++| ++++++++.. +..+.+ +|..+ +..+.... . ..+.|+++..+++.+.||
T Consensus 114 v~~~~~~~~g~~P~~ia~Sp-DGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~-~---~~~~p~g~~~~~~~~~dg 185 (368)
T 1mda_H 114 LPDAPRFSVGPRVHIIGNCA-SSACLLFFLFGSSAAAGLSVPGASD---DQLTKSAS-C---FHIHPGAAATHYLGSCPA 185 (368)
T ss_dssp ETTSCSCCBSCCTTSEEECT-TSSCEEEEECSSSCEEEEEETTTEE---EEEEECSS-C---CCCEEEETTEEECCCCTT
T ss_pred CCCccccccCCCcceEEEcC-CCCEEEEEccCCCCeEEEEEEchhh---ceEEECCC-c---eEEccCCCeEEEEEcCCC
Confidence 32 13466899999 8888887764 457888 99887 44443211 1 234567766777788899
Q ss_pred cEEEEecCC----Ccccee----eeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcc-ccceec--------c-
Q psy6213 164 TIQQWDVRR----PEKCFY----QFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPS-LEYSIN--------T- 225 (330)
Q Consensus 164 ~i~i~d~~~----~~~~~~----~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~-~~~~~~--------~- 225 (330)
.+.+.|+.+ .++... .+.....+. . .+++..++..+. +.+.+.|...... ...... .
T Consensus 186 ~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~ 260 (368)
T 1mda_H 186 SLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADN 260 (368)
T ss_dssp SCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTT
T ss_pred CEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccc
Confidence 998888876 222221 111122333 3 566666666666 8999999865421 111000 0
Q ss_pred --ccceEEEEEcCCCCeEEEEeecc-c-----CCeEEEEEccCCCccceEeecCCCCeEEEEEecCCC-EEEEee-cCCe
Q psy6213 226 --IASVSRIKWRPQRKFHLASCSLV-V-----DSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQ-LFIASS-RVSI 295 (330)
Q Consensus 226 --~~~v~~~~~~~~~~~l~~~~~~~-~-----~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~s~~-~dg~ 295 (330)
......++++|+++.++++.... . ++.+.++|+.+.+. +..+.... ...+++|+|||+ .+++.. .++.
T Consensus 261 ~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v-v~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~ 338 (368)
T 1mda_H 261 FRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT-SGPISNGH-DSDAIIAAQDGASDNYANSAGTEV 338 (368)
T ss_dssp EEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE-EECCEEEE-EECEEEECCSSSCEEEEEETTTTE
T ss_pred cccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeE-EEEEECCC-CcceEEECCCCCEEEEEccCCCCe
Confidence 11122268999999877654300 0 13566999999876 55554332 588999999998 456666 5999
Q ss_pred Eeeeecc
Q psy6213 296 IPRAKNI 302 (330)
Q Consensus 296 i~iw~~~ 302 (330)
|.+++..
T Consensus 339 VsVID~~ 345 (368)
T 1mda_H 339 LDIYDAA 345 (368)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 9999854
No 224
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.46 E-value=6e-10 Score=88.48 Aligned_cols=245 Identities=9% Similarity=0.056 Sum_probs=150.2
Q ss_pred CCeEEEEEcCCcceee-----eeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccc
Q psy6213 23 RNVFKIFLIKDTEFVE-----THNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHK 97 (330)
Q Consensus 23 d~~i~iw~~~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~ 97 (330)
.+.|+.++++...... ..... ...+..++|++.++.++++-..++.|..++... ...........
T Consensus 9 ~~~I~~~~~~g~~~~~~~~~~~~~~~-------~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g---~~~~~~~~~~~ 78 (267)
T 1npe_A 9 TGKIERLPLERNTMKKTEAKAFLHIP-------AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHG---GEPTTIIRQDL 78 (267)
T ss_dssp EEEEEEEEESSSCBCGGGCEEEEEEE-------EEEEEEEEEETTTTEEEEEETTTTEEEEEESSS---CCCEEEECTTC
T ss_pred CCeEEEEEecCcccccccceeeecCC-------CCcEEEEEEecCCCEEEEEECCCCEEEEEecCC---CCcEEEEECCC
Confidence 5578888887644211 11111 112478999983445555555678999999875 22222222222
Q ss_pred cceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEec--CCcEEEEecCCCcc
Q psy6213 98 RTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSE--NGTIQQWDVRRPEK 175 (330)
Q Consensus 98 ~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~--dg~i~i~d~~~~~~ 175 (330)
.....+++.|.++.++++-...+.|.+++++.................++++|++.+++++... .+.|..+++....
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~- 157 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN- 157 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-
Confidence 5678999998445555565667899999986433222222222567899999977655555443 4688888876422
Q ss_pred ceeee-ccCCCCeEEEEEcCCCCEEE-EEecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeE
Q psy6213 176 CFYQF-TAHSGPIFACDWHPEHAWLA-TASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSV 253 (330)
Q Consensus 176 ~~~~~-~~~~~~i~~~~~~~~~~~l~-~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i 253 (330)
...+ .........++++|++..|+ +-...+.|.++|........ ..........++.. +..++++.. ..+.|
T Consensus 158 -~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~-~~~~~~~P~gi~~d--~~~lyva~~--~~~~v 231 (267)
T 1npe_A 158 -RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRK-VLEGLQYPFAVTSY--GKNLYYTDW--KTNSV 231 (267)
T ss_dssp -CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEE-EEECCCSEEEEEEE--TTEEEEEET--TTTEE
T ss_pred -cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEE-EecCCCCceEEEEe--CCEEEEEEC--CCCeE
Confidence 2222 12334678999999876554 44466789999987643222 22222344566654 455666665 57899
Q ss_pred EEEEccCCCccceEeecCC-CCeEEEEEecCCC
Q psy6213 254 NVWDIRRPYIPLASFTEHK-DVVSGLAWRGDPQ 285 (330)
Q Consensus 254 ~i~d~~~~~~~~~~~~~~~-~~v~~~~~~~~~~ 285 (330)
..+|..+++. +..+.... ....++++.|++.
T Consensus 232 ~~~d~~~g~~-~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 232 IAMDLAISKE-MDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEETTTTEE-EEEECCSSCCCCCCEEEECSCC
T ss_pred EEEeCCCCCc-eEEEccccccccceeeecCccC
Confidence 9999988765 55554332 2478888888765
No 225
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.45 E-value=4.6e-11 Score=99.20 Aligned_cols=227 Identities=11% Similarity=0.096 Sum_probs=146.7
Q ss_pred EEe--eCCCe-eecC--CCeEEEEEcCCc----ceeeeecee-eccccccccceeeeeecccCCcEEEEEcCC------C
Q psy6213 11 GLK--ADNGL-AQPS--RNVFKIFLIKDT----EFVETHNLR-VGKNINLNFSCNDVAWSCIEENHIATGATN------G 74 (330)
Q Consensus 11 ~~s--~~~~~-~~~g--d~~i~iw~~~~~----~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d------g 74 (330)
.++ +++++ ++.| ++.|.++|+.+. +.....+.. ........ ....+...| ++ +++++..+ |
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s-~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g 164 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYS-RLHTVHCGP-DA-IYISALGNEEGEGPG 164 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEE-EEEEEEECS-SC-EEEEEEEETTSCSCC
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCC-cccceeECC-Ce-EEEEcCCCcCCCCCC
Confidence 347 88888 5555 999999999754 333333100 00000111 125677888 77 66666555 7
Q ss_pred cEEEEECCCCCCCceeEEecccc---cceeEEEEEecCCCEEEEEe-------------------cCCcEEEEEeecCce
Q psy6213 75 AVVVWNLGQISRSKQERVFNDHK---RTVNKVSFHYVESNWLISGS-------------------QDGTMRLFDIRCQES 132 (330)
Q Consensus 75 ~i~iw~~~~~~~~~~~~~~~~~~---~~i~~i~~~~~~~~~l~~~~-------------------~d~~i~i~d~~~~~~ 132 (330)
.|.++|.++ .+.+..+.... .--..+-|+| +++.+++.. ...+|.+||+.+++.
T Consensus 165 ~v~vlD~~T---~~v~~~~~~~~~~~~~~Yd~~~~p-~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~ 240 (462)
T 2ece_A 165 GILMLDHYS---FEPLGKWEIDRGDQYLAYDFWWNL-PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR 240 (462)
T ss_dssp EEEEECTTT---CCEEEECCSBCTTCCCCCCEEEET-TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE
T ss_pred eEEEEECCC---CeEEEEEccCCCCccccceEEECC-CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE
Confidence 899999988 66666665222 2244588898 788888774 367999999998888
Q ss_pred eeeeecCC--CCeEEEEE--cCCCCcEEEEEe-----cCCcEEEEecCCCccc--eee--ecc----------------C
Q psy6213 133 TKIFHSNT--ESVRDVEF--NPHSPYAFASVS-----ENGTIQQWDVRRPEKC--FYQ--FTA----------------H 183 (330)
Q Consensus 133 ~~~~~~~~--~~v~~~~~--~~~~~~~~~~~~-----~dg~i~i~d~~~~~~~--~~~--~~~----------------~ 183 (330)
+.++.... .....+.| +|++++.++++- .+++|.+|.... +.. ... +.. -
T Consensus 241 ~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~ 319 (462)
T 2ece_A 241 IHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPEILKPFKAV 319 (462)
T ss_dssp EEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET-TEEEEEEEEEECCEECCSSCCGGGGGGTEE
T ss_pred eeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC-CceeEEEEEeCCCccccccccccccccccC
Confidence 88777532 23455655 999997666666 677887766543 210 000 000 0
Q ss_pred CCCeEEEEEcCCCCEEEEEec-CCcEEEEeCCCCcc--ccceeccc---------------cceEEEEEcCCCCeEEEEe
Q psy6213 184 SGPIFACDWHPEHAWLATASR-DKTIKVWDLSIKPS--LEYSINTI---------------ASVSRIKWRPQRKFHLASC 245 (330)
Q Consensus 184 ~~~i~~~~~~~~~~~l~~~~~-dg~i~i~d~~~~~~--~~~~~~~~---------------~~v~~~~~~~~~~~l~~~~ 245 (330)
......+.++|||++|.++.. .+.|.+||+..... +....... .....++++|||++|+++.
T Consensus 320 ~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 320 PPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 245788999999999887774 67899999864321 11222221 1368899999999988776
No 226
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.43 E-value=7.9e-12 Score=103.07 Aligned_cols=252 Identities=8% Similarity=-0.044 Sum_probs=158.5
Q ss_pred EEEEeeCCCe-eec----------C-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcC--CC
Q psy6213 9 KHGLKADNGL-AQP----------S-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGAT--NG 74 (330)
Q Consensus 9 ~~~~s~~~~~-~~~----------g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~--dg 74 (330)
.+.++|||++ .++ . ++.|.+||..+++....+................++++| ++++++++.. +.
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~Sp-DGk~lyVan~~~~~ 147 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCA-SSACLLFFLFGSSA 147 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECT-TSSCEEEEECSSSC
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcC-CCCEEEEEccCCCC
Confidence 6999999998 333 2 678999999999988777654111000001126899999 9988888864 35
Q ss_pred cEEE--EECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeec-----Cceee----eeecCCCCe
Q psy6213 75 AVVV--WNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC-----QESTK----IFHSNTESV 143 (330)
Q Consensus 75 ~i~i--w~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~-----~~~~~----~~~~~~~~v 143 (330)
.+.+ +|..+ ...+..- +. ..+.|.+...+++.+.||.+.+.|+.+ ++... .+.....+.
T Consensus 148 ~v~V~~iD~~t------v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~ 217 (368)
T 1mda_H 148 AAGLSVPGASD------DQLTKSA-SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA 217 (368)
T ss_dssp EEEEEETTTEE------EEEEECS-SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE
T ss_pred eEEEEEEchhh------ceEEECC-Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc
Confidence 6888 88754 2222211 11 223454566777778899999999876 33321 122223343
Q ss_pred EEEEEcCCCCcEEEEEecCCcEEEEecCCCc-cceeeecc----------CCCCeEEEEEcCCCCEEEEEec-C------
Q psy6213 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPE-KCFYQFTA----------HSGPIFACDWHPEHAWLATASR-D------ 205 (330)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~-~~~~~~~~----------~~~~i~~~~~~~~~~~l~~~~~-d------ 205 (330)
. .+++.. ++..+. +.+.+.|+.... ..+..+.. .......++++|+++.++.+.. +
T Consensus 218 ---~-~~~~~~-~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~ 291 (368)
T 1mda_H 218 ---Q-ANYPGM-LVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLA 291 (368)
T ss_dssp ---E-ETTTTE-EEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTS
T ss_pred ---c-cccCCE-EEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccc
Confidence 3 566664 444455 899999986522 11221110 1112223789999988876543 2
Q ss_pred --CcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeeccc-CCeEEEEEccCCCccceEeecCCCCeEEEEEec
Q psy6213 206 --KTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVV-DSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRG 282 (330)
Q Consensus 206 --g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~-~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~ 282 (330)
+.+.++|+.+.+... ..........++|+|||++++++.. . ++.|.++|+.+.+. +..+... ....++++.+
T Consensus 292 ~~~~~~ViD~~t~~vv~-~i~vg~~p~gi~~s~Dg~~l~va~~--~~~~~VsVID~~t~kv-v~~I~vg-~~P~~i~~~~ 366 (368)
T 1mda_H 292 AAENTSSVTASVGQTSG-PISNGHDSDAIIAAQDGASDNYANS--AGTEVLDIYDAASDQD-QSSVELD-KGPESLSVQN 366 (368)
T ss_dssp CEEEEEEEESSSCCEEE-CCEEEEEECEEEECCSSSCEEEEEE--TTTTEEEEEESSSCEE-EEECCCC-SCCCEEECCC
T ss_pred cCCCEEEEECCCCeEEE-EEECCCCcceEEECCCCCEEEEEcc--CCCCeEEEEECCCCcE-EEEEECC-CCCCEEEeec
Confidence 356699999985543 3334457899999999987666664 2 89999999999876 5666543 3345666543
No 227
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.42 E-value=2.5e-11 Score=104.22 Aligned_cols=235 Identities=9% Similarity=0.042 Sum_probs=154.6
Q ss_pred eCCCe-eecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeee-c-ccCCcEEEEEc-----------------
Q psy6213 14 ADNGL-AQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAW-S-CIEENHIATGA----------------- 71 (330)
Q Consensus 14 ~~~~~-~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~-~~~~~~l~~~~----------------- 71 (330)
+||++ .++. ++.|.+.|+++.+....+.++.+.. ...+++ + | +++++++++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~------phg~~~~~~p-~~~~v~~~~~~~~p~~~dg~~l~~~~ 171 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKG------IHGLRPQKWP-RSNYVFCNGEDETPLVNDGTNMEDVA 171 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCS------EEEEEECCSS-BCSEEEEEECSCEESSCSSSSTTCGG
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCC------CcceeeeecC-CCcEEEEecccccccCCCCccccccc
Confidence 38888 4444 8889999999998877665544322 367777 4 7 888887774
Q ss_pred -CCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCC------------------------------
Q psy6213 72 -TNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDG------------------------------ 120 (330)
Q Consensus 72 -~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~------------------------------ 120 (330)
.++.+.+.|.++ .+...++.--. ....++++| +++++++.+.+.
T Consensus 172 ~~~~~vtvID~~t---~~v~~qI~Vgg-~pd~~~~sp-dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~ 246 (595)
T 1fwx_A 172 NYVNVFTAVDADK---WEVAWQVLVSG-NLDNCDADY-EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIA 246 (595)
T ss_dssp GEEEEEEEEETTT---TEEEEEEEESS-CCCCEEECS-SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHH
T ss_pred ccCceEEEEECCC---CeEEEEEEeCC-CccceEECC-CCCEEEEEecCcccCcchhhccccccceEEEeeccceeEecc
Confidence 345789999987 55555554322 456678888 788887777542
Q ss_pred --------cEEEEEeec--Cce-eeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCc-----------ccee
Q psy6213 121 --------TMRLFDIRC--QES-TKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPE-----------KCFY 178 (330)
Q Consensus 121 --------~i~i~d~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~-----------~~~~ 178 (330)
.|.+.|..+ ++. +..+.. .....++.++|||+++++++..+.+|.++|+.+.. ....
T Consensus 247 ~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~ 325 (595)
T 1fwx_A 247 AGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVA 325 (595)
T ss_dssp HTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEE
T ss_pred CCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEE
Confidence 366666665 333 334432 23466799999999988888889999999998632 1122
Q ss_pred eeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCC---------ccccceeccccce------EEEEEcCCCCeEEE
Q psy6213 179 QFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIK---------PSLEYSINTIASV------SRIKWRPQRKFHLA 243 (330)
Q Consensus 179 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---------~~~~~~~~~~~~v------~~~~~~~~~~~l~~ 243 (330)
... -......++|+|+|...++.-.|++|.+||+... ............. ..+.++|||++|++
T Consensus 326 ~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~ 404 (595)
T 1fwx_A 326 EPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVC 404 (595)
T ss_dssp CCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEE
T ss_pred EcC-CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEE
Confidence 222 2346789999999955556668999999998762 1111122211111 12355899999888
Q ss_pred EeecccCCe----------EEEEEccCCC
Q psy6213 244 SCSLVVDSS----------VNVWDIRRPY 262 (330)
Q Consensus 244 ~~~~~~~~~----------i~i~d~~~~~ 262 (330)
+...+.|.- -.++|+..++
T Consensus 405 ~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 405 LSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp EESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred cCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 776322332 2889996655
No 228
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.41 E-value=1.7e-09 Score=85.80 Aligned_cols=231 Identities=9% Similarity=0.015 Sum_probs=142.9
Q ss_pred cEEEEEcCCCcEEEEECCCCCCCc--eeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCC
Q psy6213 65 NHIATGATNGAVVVWNLGQISRSK--QERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTES 142 (330)
Q Consensus 65 ~~l~~~~~dg~i~iw~~~~~~~~~--~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~ 142 (330)
.+|+.+.. +.|+.++++...... ....+......+..++|++.++.++++-..++.|..+++...............
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 34555543 478888887522111 011222223567899999844555556566789999998765543333333356
Q ss_pred eEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEec---CCcEEEEeCCCCccc
Q psy6213 143 VRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASR---DKTIKVWDLSIKPSL 219 (330)
Q Consensus 143 v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---dg~i~i~d~~~~~~~ 219 (330)
...++++|++.+++++-...+.|.++++... ...............++++|++..|+.+.. .+.|..+++......
T Consensus 81 p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~-~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~ 159 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQLDRIEVAKMDGT-QRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRR 159 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCE
T ss_pred ccEEEEEecCCeEEEEECCCCEEEEEEcCCC-CEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcE
Confidence 8899999987766777677789999998742 221222222246789999997665555543 368888887654222
Q ss_pred cceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeee
Q psy6213 220 EYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRA 299 (330)
Q Consensus 220 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 299 (330)
............++++|++..++++.. ..+.|..+|+..... ...... .....+++.. ++.++++....+.|.++
T Consensus 160 ~~~~~~~~~P~gia~d~~~~~lyv~d~--~~~~I~~~~~~g~~~-~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~ 234 (267)
T 1npe_A 160 ILAQDNLGLPNGLTFDAFSSQLCWVDA--GTHRAECLNPAQPGR-RKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAM 234 (267)
T ss_dssp EEECTTCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTEEEE-EEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred EEEECCCCCCcEEEEcCCCCEEEEEEC--CCCEEEEEecCCCce-EEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEE
Confidence 111122356889999999887777776 688999999875432 222222 2345677664 34444444456788888
Q ss_pred ecc
Q psy6213 300 KNI 302 (330)
Q Consensus 300 ~~~ 302 (330)
+..
T Consensus 235 d~~ 237 (267)
T 1npe_A 235 DLA 237 (267)
T ss_dssp ETT
T ss_pred eCC
Confidence 754
No 229
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.39 E-value=3.7e-11 Score=99.11 Aligned_cols=223 Identities=9% Similarity=-0.008 Sum_probs=140.6
Q ss_pred CcccceEEEEeeCCCeeecC-------CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEc---C
Q psy6213 3 YLSPVHKHGLKADNGLAQPS-------RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGA---T 72 (330)
Q Consensus 3 H~~~v~~~~~s~~~~~~~~g-------d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~---~ 72 (330)
|...+.+++++++|++.++. ++.|.+||+.+++....+.+..... .....+..++++|.++..+++.. .
T Consensus 65 ~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~-~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 65 TFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPIT-LSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTS-CTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred ceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhc-ccccccceEEEecCCCEEEEEcCccCC
Confidence 45678999999999884443 3799999999888766665432111 11123488999983344445554 5
Q ss_pred CCcEEEEECCCCCCCceeEEeccccccee-EEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCC
Q psy6213 73 NGAVVVWNLGQISRSKQERVFNDHKRTVN-KVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPH 151 (330)
Q Consensus 73 dg~i~iw~~~~~~~~~~~~~~~~~~~~i~-~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~ 151 (330)
++.|.+||+.+ .+....+..|..... ...+.+ ++..+.+.+.++.+..|. ..+..++|+|+
T Consensus 144 ~~~i~v~d~~~---g~~~r~~~~~~~~~~~~~~~~~-~g~~~~~~~~~g~~~~~~--------------~~~~gia~s~d 205 (343)
T 2qe8_A 144 KAALIRVDLQT---GLAARVLQGYPGIAPEDIDLVI-DGVPVQIGQPDGTVIRPH--------------LGVNGIVLDAE 205 (343)
T ss_dssp GCEEEEEETTT---CCEEEECTTCTTTSCCSCCCEE-TTEECBEECTTSCEECCC--------------CCEEEEEECTT
T ss_pred CCeEEEEECCC---CCEEEEecCCCcccccccceeE-CCEEEEeccCCCceecee--------------cccceeEeccC
Confidence 78899999987 455555544322111 134454 566677777777775543 23678999999
Q ss_pred CCcEEEEEecCC-cEEEEecCC--Cc-----ccee--eeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccc
Q psy6213 152 SPYAFASVSENG-TIQQWDVRR--PE-----KCFY--QFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEY 221 (330)
Q Consensus 152 ~~~~~~~~~~dg-~i~i~d~~~--~~-----~~~~--~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 221 (330)
++. ++.+...+ .+..++... .. +... ...++.+....++++++|.++++...++.|.+||..+++....
T Consensus 206 g~~-ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~ 284 (343)
T 2qe8_A 206 NEW-LYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLL 284 (343)
T ss_dssp SCE-EEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred CCE-EEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEE
Confidence 985 55554444 565555321 00 0001 1113344567899999999999988999999999844432111
Q ss_pred e-eccccceEEEEEcCCCCeEEEEe
Q psy6213 222 S-INTIASVSRIKWRPQRKFHLASC 245 (330)
Q Consensus 222 ~-~~~~~~v~~~~~~~~~~~l~~~~ 245 (330)
. ......+..++|.+++..++++.
T Consensus 285 ~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 285 VTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp EECGGGSCEEEEEECTTSCEEEEEC
T ss_pred EECCceecCCeeEECCCCcEEEEeC
Confidence 1 12245689999999987544443
No 230
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.37 E-value=1.5e-10 Score=94.83 Aligned_cols=262 Identities=9% Similarity=-0.017 Sum_probs=158.9
Q ss_pred ceEEEEeeCCCeeecCCCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCC
Q psy6213 7 VHKHGLKADNGLAQPSRNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISR 86 (330)
Q Consensus 7 v~~~~~s~~~~~~~~gd~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~ 86 (330)
+.++...++|.+.++.++ +..+|. +++....+...... ....... +..+..++.++.+..+|...
T Consensus 62 ~~~~~~~~~g~l~v~t~~-l~~~d~-~g~~~~~~~~~~~~-------~~~~~~~---~~~l~v~t~~~~l~~~d~~g--- 126 (330)
T 3hxj_A 62 ECRPSIGKDGTIYFGSDK-VYAINP-DGTEKWRFDTKKAI-------VSDFTIF---EDILYVTSMDGHLYAINTDG--- 126 (330)
T ss_dssp EECCEETTTTEECCSSCE-EEEECC-CGGGGGGSCC------------CCEEEE---TTEEEEECTTSEEEEECTTS---
T ss_pred ccceEEecCCcEEEecCc-EEEECC-CCcEEEEEECCCCc-------ccCceEE---CCEEEEEecCCEEEEEcCCC---
Confidence 345555556655444433 666765 44433222221110 1122221 45677788888899998762
Q ss_pred CceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEE
Q psy6213 87 SKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQ 166 (330)
Q Consensus 87 ~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~ 166 (330)
+...........+.++...+ ++. +..++.++.|..+|.. ++....+......+.++...+++. +..++ +.|.
T Consensus 127 -~~~~~~~~~~~~~~~~~~~~-~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~--l~v~t--~~l~ 198 (330)
T 3hxj_A 127 -TEKWRFKTKKAIYATPIVSE-DGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT--IYFGS--DKVY 198 (330)
T ss_dssp -CEEEEEECSSCCCSCCEECT-TSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC--EEEES--SSEE
T ss_pred -CEEEEEcCCCceeeeeEEcC-CCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE--EEEEe--CEEE
Confidence 23333333444556666653 444 6677888999999998 777666665556677777877776 44555 8899
Q ss_pred EEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEee
Q psy6213 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCS 246 (330)
Q Consensus 167 i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 246 (330)
.+| .+ +............+.++...++|. +..++.++.+..+|.. ++...........+..+...+++. +.++.
T Consensus 199 ~~d-~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t- 272 (330)
T 3hxj_A 199 AIN-PD-GTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINPD-GTEKWRFKTGKRIESSPVIGNTDT-IYFGS- 272 (330)
T ss_dssp EEC-TT-SCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EEEEC-
T ss_pred EEC-CC-CcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECCC-CCEeEEeeCCCCccccceEcCCCe-EEEec-
Confidence 999 54 444444444556688888888875 5556777888888753 333322222223334456666776 45554
Q ss_pred cccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 247 LVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 247 ~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
.++.|..+|. +++. ..........+.++...+++. |..++.+|.+++....
T Consensus 273 --~~ggl~~~d~-~g~~-~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 273 --YDGHLYAINP-DGTE-KWNFETGSWIIATPVIDENGT-IYFGTRNGKFYALFNL 323 (330)
T ss_dssp --TTCEEEEECT-TSCE-EEEEECSSCCCSCCEECTTCC-EEEECTTSCEEEEEC-
T ss_pred --CCCCEEEECC-CCcE-EEEEEcCCccccceEEcCCCE-EEEEcCCCeEEEEecc
Confidence 3889999996 4543 444444455677777777776 5568899999987543
No 231
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.35 E-value=6.1e-13 Score=110.81 Aligned_cols=203 Identities=12% Similarity=0.061 Sum_probs=110.4
Q ss_pred CCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCC-
Q psy6213 63 EENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTE- 141 (330)
Q Consensus 63 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~- 141 (330)
++..+++++.||.|..||..+ ++..-.+.. +.+.+..+.+ ++..+++++.|+.|+.||.++++.+..+..+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~t---G~~~W~~~~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~ 81 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRT---GSIKWTLKE--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE 81 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTT---CCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSEECSCCHHH
T ss_pred eCCEEEEEcCCCEEEEEECCC---CCEEEEecC--CCceecceEc-CCCEEEEeCCCCEEEEEECCCCceeeeeeccCcc
Confidence 578899999999999999988 566655554 4454444554 666778888999999999998887665543211
Q ss_pred CeE-EEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcccc
Q psy6213 142 SVR-DVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE 220 (330)
Q Consensus 142 ~v~-~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 220 (330)
.+. +..+. .+. .+++++.++.++.||.++ ++.+..+..+. ...++|++..+++++.|+.|+.||.++++...
T Consensus 82 ~~~~sp~~~-~~~-~v~~g~~dg~v~a~D~~t-G~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W 154 (369)
T 2hz6_A 82 LVQASPCRS-SDG-ILYMGKKQDIWYVIDLLT-GEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRW 154 (369)
T ss_dssp HHTTCSCC-------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCC
T ss_pred ccccCceEe-cCC-EEEEEeCCCEEEEEECCC-CcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEE
Confidence 010 00111 233 477788899999999998 44444444332 23456788899999999999999999886543
Q ss_pred ceeccccceEEEEEcCCC---CeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEE-EEEecCCC
Q psy6213 221 YSINTIASVSRIKWRPQR---KFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSG-LAWRGDPQ 285 (330)
Q Consensus 221 ~~~~~~~~v~~~~~~~~~---~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~-~~~~~~~~ 285 (330)
..... ......+.++. ..++++. .+|.++.||.++++. +-... ...++.. ..+++++.
T Consensus 155 ~~~~~--~~~~~~~~~~~~~~~~v~~~~---~dg~v~a~d~~tG~~-~W~~~-~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 155 NATYF--DYAASLPEDDVDYKMSHFVSN---GDGLVVTVDSESGDV-LWIQN-YASPVVAFYVWQREGL 216 (369)
T ss_dssp EEEEE--EECCBCCCCCTTCCCCEEEEE---TSCEEEEECTTTCCE-EEEEE-CSSCEEEEEECTTSSC
T ss_pred eEecc--cccCccccCCccccceEEEEC---CCCEEEEEECCCCcE-EEEec-CCCceEEEEEecCCce
Confidence 32211 12223344432 3345544 499999999998875 44443 2344443 34445554
No 232
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.35 E-value=5.4e-11 Score=97.51 Aligned_cols=259 Identities=10% Similarity=-0.003 Sum_probs=160.2
Q ss_pred EEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCC
Q psy6213 9 KHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRS 87 (330)
Q Consensus 9 ~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~ 87 (330)
+..+..+|.+.+++ ++.|..|| .+++......... ..+.++...+ ++ .+..++.+ +..+|. + +
T Consensus 24 ~~~~d~~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~-------~~~~~~~~~~-~g-~l~v~t~~--l~~~d~-~---g 87 (330)
T 3hxj_A 24 SPILAKNGTIYLGSSNKNLYAIN-TDGSVKWFFKSGE-------IIECRPSIGK-DG-TIYFGSDK--VYAINP-D---G 87 (330)
T ss_dssp CCEECTTSCEECSSTTTTTEEEC-TTSCEEESSCGGG-------EEEECCEETT-TT-EECCSSCE--EEEECC-C---G
T ss_pred CceEccCCeEEEEcCCCEEEEEC-CCCcEEEEEecCC-------CcccceEEec-CC-cEEEecCc--EEEECC-C---C
Confidence 44555677776666 88899999 7777654433221 1135556654 44 45556555 888875 3 2
Q ss_pred ceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEE
Q psy6213 88 KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQ 167 (330)
Q Consensus 88 ~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i 167 (330)
+....+...........+. +..+..++.++.|..+|.+ ++...........+.++...+++. +..++.++.|..
T Consensus 88 ~~~~~~~~~~~~~~~~~~~---~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~--l~vgt~~~~l~~ 161 (330)
T 3hxj_A 88 TEKWRFDTKKAIVSDFTIF---EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT--IYVGSNDNYLYA 161 (330)
T ss_dssp GGGGGSCC-----CCEEEE---TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC--EEEECTTSEEEE
T ss_pred cEEEEEECCCCcccCceEE---CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE--EEEEcCCCEEEE
Confidence 2222222222223333333 4567778888999999988 776666665555566777777775 667788899999
Q ss_pred EecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeec
Q psy6213 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSL 247 (330)
Q Consensus 168 ~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~ 247 (330)
+|.. ++....+......+.++...+++.+.+ ++ +.+..+| .+++...........+.++...++|.. .++.
T Consensus 162 ~d~~--g~~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l-~v~t-- 232 (330)
T 3hxj_A 162 INPD--GTEKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTI-YVTS-- 232 (330)
T ss_dssp ECTT--SCEEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCE-EEEE--
T ss_pred ECCC--CCEeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeE-EEEc--
Confidence 9987 333444444455677788877877544 44 7899999 555444333333456778888888863 5554
Q ss_pred ccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 248 VVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 248 ~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
.++.|..+|. ++.. +.........+..+...+++ .|..++.+|.|..++..
T Consensus 233 -~~~gl~~~~~-~g~~-~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~~ 283 (330)
T 3hxj_A 233 -LDGHLYAINP-DGTE-KWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINPD 283 (330)
T ss_dssp -TTTEEEEECT-TSCE-EEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECTT
T ss_pred -CCCeEEEECC-CCCE-eEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECCC
Confidence 3788888874 3433 34444444444556665555 46667788888888753
No 233
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.33 E-value=7.5e-10 Score=99.35 Aligned_cols=260 Identities=9% Similarity=0.103 Sum_probs=158.1
Q ss_pred CCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceee-eeecccCCcEEEEEcC------CCcEEEEECCCCCC
Q psy6213 15 DNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCND-VAWSCIEENHIATGAT------NGAVVVWNLGQISR 86 (330)
Q Consensus 15 ~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~~~~------dg~i~iw~~~~~~~ 86 (330)
+++.++.. |+.|..+|..+|+..-.+........ ...+.. ... .+..+++++. +|.|..+|..+
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~--~~~~~~~p~v---~~~~v~v~~~~~~~~~~g~v~a~D~~t--- 199 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKG--SLTITGAPRV---FKGKVIIGNGGAEYGVRGYITAYDAET--- 199 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCS--SCBCCSCCEE---ETTEEEECCBCTTTCCBCEEEEEETTT---
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCc--CcccccCcEE---ECCEEEEEecccccCCCCEEEEEECCC---
Confidence 34445555 99999999999987765543300000 000111 111 2345555543 68999999988
Q ss_pred CceeEEecccc--------------------------------cceeEEEEEecCCCEEEEEecCC--------------
Q psy6213 87 SKQERVFNDHK--------------------------------RTVNKVSFHYVESNWLISGSQDG-------------- 120 (330)
Q Consensus 87 ~~~~~~~~~~~--------------------------------~~i~~i~~~~~~~~~l~~~~~d~-------------- 120 (330)
++.+-.+.... .....+++.| ++++++.+..++
T Consensus 200 G~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~-~~~~vy~~~~~~~~w~~~~~~~~~gd 278 (677)
T 1kb0_A 200 GERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA-ELNTMYVGTGNGSPWSHKVRSPKGGD 278 (677)
T ss_dssp CCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCC
T ss_pred CcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcC-CCCEEEEECCCCccccCCCCCccCCC
Confidence 45444332211 1113577887 677788776653
Q ss_pred -----cEEEEEeecCceeeeeecCC---------CCeEEEEEcCCCC--cEEEEEecCCcEEEEecCCCccceeeeccCC
Q psy6213 121 -----TMRLFDIRCQESTKIFHSNT---------ESVRDVEFNPHSP--YAFASVSENGTIQQWDVRRPEKCFYQFTAHS 184 (330)
Q Consensus 121 -----~i~i~d~~~~~~~~~~~~~~---------~~v~~~~~~~~~~--~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 184 (330)
.|..+|.++++.+-.++... .....+....+|+ ..++.++.+|.++++|.+++ +.+..+....
T Consensus 279 ~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG-~~l~~~~~~~ 357 (677)
T 1kb0_A 279 NLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNG-KFISAKNFVP 357 (677)
T ss_dssp CTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTC-CEEEEEESSC
T ss_pred CeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCC-CEeccccccc
Confidence 59999999999887765421 1122233334562 36888999999999999884 4433222110
Q ss_pred -----------CCe------------------------EEEEEcCCCCEEEEEecC------------------------
Q psy6213 185 -----------GPI------------------------FACDWHPEHAWLATASRD------------------------ 205 (330)
Q Consensus 185 -----------~~i------------------------~~~~~~~~~~~l~~~~~d------------------------ 205 (330)
.++ ..++++|++.++++...+
T Consensus 358 ~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 437 (677)
T 1kb0_A 358 VNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSG 437 (677)
T ss_dssp CSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGG
T ss_pred cCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccc
Confidence 001 257889988888776432
Q ss_pred -------------------CcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccce
Q psy6213 206 -------------------KTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266 (330)
Q Consensus 206 -------------------g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~ 266 (330)
|.|..||+.+++.... ..+..+.....+...+..++++ + .++.+++||.++++. +.
T Consensus 438 ~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~-~~~~~~~~~g~~~~~g~~v~~g-~--~dg~l~a~D~~tG~~-lw 512 (677)
T 1kb0_A 438 TGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWS-VEHVSPWNGGTLTTAGNVVFQG-T--ADGRLVAYHAATGEK-LW 512 (677)
T ss_dssp GTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEE-EEESSSCCCCEEEETTTEEEEE-C--TTSEEEEEETTTCCE-EE
T ss_pred cccccccccccccCCCCCccEEEEEeCCCCcEEee-cCCCCCCcCcceEeCCCEEEEE-C--CCCcEEEEECCCCce-ee
Confidence 7799999998854433 3333444445566667665554 4 699999999999987 55
Q ss_pred EeecCC-CCeEEEEEecCCCEEEE
Q psy6213 267 SFTEHK-DVVSGLAWRGDPQLFIA 289 (330)
Q Consensus 267 ~~~~~~-~~v~~~~~~~~~~~l~s 289 (330)
.+.... ..-.-+.|.++|+.+++
T Consensus 513 ~~~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 513 EAPTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp EEECSSCCCSCCEEEEETTEEEEE
T ss_pred eeeCCCCcccCCEEEEeCCEEEEE
Confidence 554332 22344566678865444
No 234
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.31 E-value=1.3e-09 Score=97.75 Aligned_cols=276 Identities=13% Similarity=0.099 Sum_probs=169.9
Q ss_pred CCCeeecC-CCeEEEEEcCCcceeeeeceeeccccc----cccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCce
Q psy6213 15 DNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNIN----LNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQ 89 (330)
Q Consensus 15 ~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~ 89 (330)
++.+++++ ++.|.-+|..+|+.+-.+......... .......+++ .+..+++++.|+.|..+|..+ ++.
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~---~~~~v~v~~~dg~l~alD~~t---G~~ 150 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL---WKGKVYVGAWDGRLIALDAAT---GKE 150 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE---ETTEEEEECTTSEEEEEETTT---CCE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE---ECCEEEEEcCCCEEEEEECCC---CCE
Confidence 44445555 889999999999877665544321100 0000122333 456788888999999999988 565
Q ss_pred eEEeccc-c----cceeEEEEEecCCCEEEEEec------CCcEEEEEeecCceeeeeecCCCC----------------
Q psy6213 90 ERVFNDH-K----RTVNKVSFHYVESNWLISGSQ------DGTMRLFDIRCQESTKIFHSNTES---------------- 142 (330)
Q Consensus 90 ~~~~~~~-~----~~i~~i~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~---------------- 142 (330)
+-.+... . ..+..--.. .+..+++++. ++.|+.+|.++++.+-.+......
T Consensus 151 ~W~~~~~~~~~~~~~~~~~p~v--~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~ 228 (677)
T 1kb0_A 151 VWHQNTFEGQKGSLTITGAPRV--FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAART 228 (677)
T ss_dssp EEEEETTTTCCSSCBCCSCCEE--ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTT
T ss_pred EeeecCCcCcCcCcccccCcEE--ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccc
Confidence 5555433 1 112211111 2344555543 789999999999988766532211
Q ss_pred ----------------eEEEEEcCCCCcEEEEEecCC-------------------cEEEEecCCCccceeeecc--CC-
Q psy6213 143 ----------------VRDVEFNPHSPYAFASVSENG-------------------TIQQWDVRRPEKCFYQFTA--HS- 184 (330)
Q Consensus 143 ----------------v~~~~~~~~~~~~~~~~~~dg-------------------~i~i~d~~~~~~~~~~~~~--~~- 184 (330)
...++++|++. +++.+..++ .|..+|.+++ +..-.++. |.
T Consensus 229 w~~~g~~~~~~~g~~~w~~~~~d~~~~-~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG-~~~W~~~~~~~d~ 306 (677)
T 1kb0_A 229 WDPSGKWWEAGGGGTMWDSMTFDAELN-TMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTG-KYKWHYQETPGDN 306 (677)
T ss_dssp SCGGGCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTC-CEEEEEESSTTCC
T ss_pred ccccCceeEeCCCcccccceeEcCCCC-EEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCC-CEEEEEecCCCcc
Confidence 13577888887 566666553 4999999984 44433332 21
Q ss_pred ------CCeEEEEEcCCC---CEEEEEecCCcEEEEeCCCCccccceecc-----------ccce---------------
Q psy6213 185 ------GPIFACDWHPEH---AWLATASRDKTIKVWDLSIKPSLEYSINT-----------IASV--------------- 229 (330)
Q Consensus 185 ------~~i~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----------~~~v--------------- 229 (330)
....-+....+| ..++.++.+|.++++|..+++.+...... ..++
T Consensus 307 wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~ 386 (677)
T 1kb0_A 307 WDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAV 386 (677)
T ss_dssp SCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECS
T ss_pred cccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEEC
Confidence 122223333467 68899999999999999998653322110 0011
Q ss_pred ---------EEEEEcCCCCeEEEEeec----------------------------------------ccCCeEEEEEccC
Q psy6213 230 ---------SRIKWRPQRKFHLASCSL----------------------------------------VVDSSVNVWDIRR 260 (330)
Q Consensus 230 ---------~~~~~~~~~~~l~~~~~~----------------------------------------~~~~~i~i~d~~~ 260 (330)
..++++|++..+++.... ...+.|..||+.+
T Consensus 387 P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~t 466 (677)
T 1kb0_A 387 PGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVA 466 (677)
T ss_dssp SCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTT
T ss_pred cCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCC
Confidence 146889988865554320 0027899999999
Q ss_pred CCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 261 PYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 261 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
++. +-... +..++.+..+..++..++.++.||.+++|+..
T Consensus 467 G~~-~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~ 506 (677)
T 1kb0_A 467 QKA-AWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAA 506 (677)
T ss_dssp TEE-EEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred CcE-EeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECC
Confidence 875 33333 33445556677788889999999999999853
No 235
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.31 E-value=1.2e-09 Score=98.25 Aligned_cols=275 Identities=10% Similarity=0.092 Sum_probs=165.8
Q ss_pred CCCeeecC-CCeEEEEEcCCcceeeeeceeecccccccc---c-eeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCce
Q psy6213 15 DNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNF---S-CNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQ 89 (330)
Q Consensus 15 ~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~---~-v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~ 89 (330)
++.+++++ ++.|.-+|..+|+.+-.+............ . ...++. .+..+++++.|+.|..+|..+ ++.
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~v~v~~~dg~l~AlDa~T---G~~ 143 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV---WKGKVYVGVLDGRLEAIDAKT---GQR 143 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE---ETTEEEEECTTSEEEEEETTT---CCE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE---ECCEEEEEccCCEEEEEECCC---CCE
Confidence 44445555 889999999999877666543321110000 0 011222 456788888999999999988 555
Q ss_pred eEEeccc--c---cceeE-EEEEecCCCEEEEEe------cCCcEEEEEeecCceeeeeecCC-----------------
Q psy6213 90 ERVFNDH--K---RTVNK-VSFHYVESNWLISGS------QDGTMRLFDIRCQESTKIFHSNT----------------- 140 (330)
Q Consensus 90 ~~~~~~~--~---~~i~~-i~~~~~~~~~l~~~~------~d~~i~i~d~~~~~~~~~~~~~~----------------- 140 (330)
+-.+... . ..+.+ ..+. ++ .+++++ .++.|+.||.++++.+-.+....
T Consensus 144 ~W~~~~~~~~~~~~~~~~sP~v~--~g-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~ 220 (689)
T 1yiq_A 144 AWSVDTRADHKRSYTITGAPRVV--NG-KVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAK 220 (689)
T ss_dssp EEEEECCSCTTSCCBCCSCCEEE--TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHT
T ss_pred eeeecCcCCCCCCccccCCcEEE--CC-EEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccccc
Confidence 4443321 1 11111 1111 34 444443 37899999999999876664210
Q ss_pred --------------CCeEEEEEcCCCCcEEEEEecCCc-------------------EEEEecCCCccceeeecc--CC-
Q psy6213 141 --------------ESVRDVEFNPHSPYAFASVSENGT-------------------IQQWDVRRPEKCFYQFTA--HS- 184 (330)
Q Consensus 141 --------------~~v~~~~~~~~~~~~~~~~~~dg~-------------------i~i~d~~~~~~~~~~~~~--~~- 184 (330)
.....++++|+.. +++.+..++. |..+|.+++ +.+-.++. |.
T Consensus 221 ~~~g~~w~~~~~g~~~w~~~~~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG-~~~W~~~~~~~d~ 298 (689)
T 1yiq_A 221 TWFGDAYVEQGGGGTAWDSFAYDPELN-LLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTG-EYVWHYQTTPGDA 298 (689)
T ss_dssp TCCSSTHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTC-CEEEEEESSTTCC
T ss_pred ccCCceeeecCCCCccccceeEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCC-ceeEeeecCCccc
Confidence 0112578888877 6777777653 999999984 44443332 21
Q ss_pred ------CCeEEEEEcCCCC---EEEEEecCCcEEEEeCCCCccccceecc----------------------------cc
Q psy6213 185 ------GPIFACDWHPEHA---WLATASRDKTIKVWDLSIKPSLEYSINT----------------------------IA 227 (330)
Q Consensus 185 ------~~i~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~----------------------------~~ 227 (330)
.+........+|+ .++.++.+|.++++|.++++.+...... ..
T Consensus 299 wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~ 378 (689)
T 1yiq_A 299 WDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKR 378 (689)
T ss_dssp SCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSC
T ss_pred ccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCe
Confidence 1222222223564 7889999999999999998654111000 00
Q ss_pred -----------ceEEEEEcCCCCeEEEEeec------------------------------------------ccCCeEE
Q psy6213 228 -----------SVSRIKWRPQRKFHLASCSL------------------------------------------VVDSSVN 254 (330)
Q Consensus 228 -----------~v~~~~~~~~~~~l~~~~~~------------------------------------------~~~~~i~ 254 (330)
.-..++++|+...+++.... ..+|.|+
T Consensus 379 ~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~ 458 (689)
T 1yiq_A 379 NLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLI 458 (689)
T ss_dssp EEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEE
T ss_pred eEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEE
Confidence 01126888887765554220 0137899
Q ss_pred EEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 255 i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
.||+.+++. +-....+ .++..-.+...+.+++.++.||.++.|+..
T Consensus 459 A~D~~tG~~-~W~~~~~-~~~~~g~~~tagglvf~gt~dg~l~a~D~~ 504 (689)
T 1yiq_A 459 AWDPVKQQA-AWEVPYV-TIFNGGTLSTAGNLVFEGSADGRVIAYAAD 504 (689)
T ss_dssp EEETTTTEE-EEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred EEECCCCCe-EeEccCC-CCccCccceECCCEEEEECCCCcEEEEECC
Confidence 999999975 4444433 334444566678899999999999999843
No 236
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.29 E-value=4e-08 Score=81.00 Aligned_cols=241 Identities=12% Similarity=0.002 Sum_probs=144.2
Q ss_pred ceEEEEeeCCCeeecCCCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCC
Q psy6213 7 VHKHGLKADNGLAQPSRNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISR 86 (330)
Q Consensus 7 v~~~~~s~~~~~~~~gd~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~ 86 (330)
-+|.+..+++.++.+..+.|+..+++......... .. ..+..++|.+.++.++.+-...+.|..+++..
T Consensus 36 ~~C~~~~~~~~ll~~~~~~I~~i~~~g~~~~~~~~-------~~-~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g--- 104 (349)
T 3v64_C 36 RSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLN-------NL-ENAIALDFHHRRELVFWSDVTLDRILRANLNG--- 104 (349)
T ss_dssp SCEEESSSCCEEEEECBSCEEEECTTSCCEEEEEC-------SC-SCEEEEEEETTTTEEEEEETTTTEEEEEETTS---
T ss_pred CcccccccCceeEeecccceEEEeCCCCeeEEeec-------CC-CceEEEEEeccccEEEEEeccCCceEEEecCC---
Confidence 34444444322233334556666666544322211 11 12478999984555555556678899999876
Q ss_pred CceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecC-CcE
Q psy6213 87 SKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSEN-GTI 165 (330)
Q Consensus 87 ~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-g~i 165 (330)
................+++.+.+++++++-...+.|.+.+++.......+...-.....++++|.+.+++++-... +.|
T Consensus 105 ~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I 184 (349)
T 3v64_C 105 SNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRI 184 (349)
T ss_dssp CSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred CCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEE
Confidence 2222222222345678888875566666766678999999875443333333445678999999877666665555 788
Q ss_pred EEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEE-ecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEE
Q psy6213 166 QQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATA-SRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLAS 244 (330)
Q Consensus 166 ~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 244 (330)
..+++... .........-...+.++++|++..|..+ ...+.|..+|+..................+++. .+ .++.+
T Consensus 185 ~r~~~dG~-~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~-~ly~t 261 (349)
T 3v64_C 185 EASSMDGS-GRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-ED-SLYWT 261 (349)
T ss_dssp EEEETTSC-SCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TT-EEEEE
T ss_pred EEEeCCCC-CcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CC-EEEEe
Confidence 88888742 2222222234467899999866655544 456789999987643322222234456777773 33 45666
Q ss_pred eecccCCeEEEEEccCCCc
Q psy6213 245 CSLVVDSSVNVWDIRRPYI 263 (330)
Q Consensus 245 ~~~~~~~~i~i~d~~~~~~ 263 (330)
.. ..+.|..++..+++.
T Consensus 262 d~--~~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 262 DW--HTKSINSANKFTGKN 278 (349)
T ss_dssp ET--TTTEEEEEETTTCCS
T ss_pred cC--CCCeEEEEEccCCCc
Confidence 55 588898888655544
No 237
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.29 E-value=3.3e-10 Score=97.36 Aligned_cols=221 Identities=12% Similarity=0.117 Sum_probs=148.8
Q ss_pred CCcEEEEEc-CCCcEEEEECCCCCCCceeEEecc-cccceeEEEE-E-ecCCCEEEEEe------------------cCC
Q psy6213 63 EENHIATGA-TNGAVVVWNLGQISRSKQERVFND-HKRTVNKVSF-H-YVESNWLISGS------------------QDG 120 (330)
Q Consensus 63 ~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~-~~~~i~~i~~-~-~~~~~~l~~~~------------------~d~ 120 (330)
+++++++.. .++.|.+.|+.+ .+....+.- .......+++ . | +++++++++ .++
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t---~~~~~ii~ip~g~~phg~~~~~~p-~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDV---MKCDAILEIPNAKGIHGLRPQKWP-RSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTT---TEEEEEEECSSCCSEEEEEECCSS-BCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCC---ceEeeEEeCCCCCCCcceeeeecC-CCcEEEEecccccccCCCCcccccccccCc
Confidence 455555544 456799999998 665553332 2245778887 4 7 788888774 346
Q ss_pred cEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecC-------------------------------------C
Q psy6213 121 TMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSEN-------------------------------------G 163 (330)
Q Consensus 121 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-------------------------------------g 163 (330)
.+.+.|..+.+...++.... ....++++|++++++++...+ +
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~ 254 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELN 254 (595)
T ss_dssp EEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEET
T ss_pred eEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEEC
Confidence 79999999988888877433 456788999999755554332 2
Q ss_pred cEEEEecCC--CccceeeeccCCCCeEEEEEcCCCCEEEEEe-cCCcEEEEeCCCCcc-----------ccceeccccce
Q psy6213 164 TIQQWDVRR--PEKCFYQFTAHSGPIFACDWHPEHAWLATAS-RDKTIKVWDLSIKPS-----------LEYSINTIASV 229 (330)
Q Consensus 164 ~i~i~d~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~-----------~~~~~~~~~~v 229 (330)
.|.+.|.++ ....+..+.. .....++.++|||+++++++ .+.+|.++|+.+.+. ...........
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP 333 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGP 333 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCE
T ss_pred cEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCc
Confidence 366667665 1111233332 34567899999999877666 678899999986521 22233445678
Q ss_pred EEEEEcCCCCeEEEEeecccCCeEEEEEccCC---------CccceEeecCCCCe-----EEEEEecCCCEEEEeec
Q psy6213 230 SRIKWRPQRKFHLASCSLVVDSSVNVWDIRRP---------YIPLASFTEHKDVV-----SGLAWRGDPQLFIASSR 292 (330)
Q Consensus 230 ~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~---------~~~~~~~~~~~~~v-----~~~~~~~~~~~l~s~~~ 292 (330)
..++|+|+| +++++.. .+++|.+||+... ...+..+..|-.+- .++..+|||++|+++..
T Consensus 334 ~h~aF~~dG-~aY~t~~--ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 334 LHTAFDGRG-NAYTSLF--LDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp EEEEECTTS-EEEEEET--TTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred ceEEECCCC-eEEEEEe--cCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 999999999 6677776 7999999999761 22356666665432 12245789999998754
No 238
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.29 E-value=2.9e-12 Score=106.70 Aligned_cols=200 Identities=12% Similarity=0.040 Sum_probs=104.7
Q ss_pred CCe-eecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEe
Q psy6213 16 NGL-AQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVF 93 (330)
Q Consensus 16 ~~~-~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 93 (330)
+.. ++++ |+.|+.||..+|+..-.+.. +. +.+..+.+ ++..+++++.||.|+.||..+ ++....+
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~-------~~s~p~~~-~g~~~v~~s~dg~l~a~d~~t---G~~~w~~ 75 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DP-------VLQVPTHV-EEPAFLPDPNDGSLYTLGSKN---NEGLTKL 75 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC--CC-------SCCCC------CCEEECTTTCCEEEC--------CCSEEC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC--CC-------ceecceEc-CCCEEEEeCCCCEEEEEECCC---Cceeeee
Confidence 444 5555 99999999999987766544 22 23334444 677888888999999999977 4443333
Q ss_pred ccccc-cee-EEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecC
Q psy6213 94 NDHKR-TVN-KVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR 171 (330)
Q Consensus 94 ~~~~~-~i~-~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~ 171 (330)
..+.. .+. ...+. .+..+++++.++.++.||.++++.+..+..+. ...++|++. .+++++.++.|+.||.+
T Consensus 76 ~~~~~~~~~~sp~~~--~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~-~v~~~~~dg~v~a~d~~ 148 (369)
T 2hz6_A 76 PFTIPELVQASPCRS--SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTS-LLYLGRTEYTITMYDTK 148 (369)
T ss_dssp SCCHHHHHTTCSCC-------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSS
T ss_pred eccCccccccCceEe--cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCC-EEEEEecCCEEEEEECC
Confidence 32211 111 11111 34567888889999999999999887776443 234566666 58888889999999998
Q ss_pred CCccceeeeccCCCCeEEEEEcCCC---CEEEEEecCCcEEEEeCCCCccccceeccccceE-EEEEcCCCC
Q psy6213 172 RPEKCFYQFTAHSGPIFACDWHPEH---AWLATASRDKTIKVWDLSIKPSLEYSINTIASVS-RIKWRPQRK 239 (330)
Q Consensus 172 ~~~~~~~~~~~~~~~i~~~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~-~~~~~~~~~ 239 (330)
++ +.+-.+..+. .....+.++. ..+++++.||.++.||.++++..... ....++. ...+++++.
T Consensus 149 tG-~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~-~~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 149 TR-ELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQ-NYASPVVAFYVWQREGL 216 (369)
T ss_dssp SS-SCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEE-ECSSCEEEEEECTTSSC
T ss_pred CC-CEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEe-cCCCceEEEEEecCCce
Confidence 84 4333332111 1223334332 45777889999999999988554332 2334443 344555654
No 239
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.28 E-value=1e-08 Score=85.57 Aligned_cols=257 Identities=7% Similarity=0.021 Sum_probs=153.2
Q ss_pred eCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEE
Q psy6213 14 ADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERV 92 (330)
Q Consensus 14 ~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 92 (330)
.++..+++. ++.|..+|.++++..-......... ..... .+..+++++.++.+..+|..+ ++....
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~-------~~p~~---~~~~v~v~~~~g~l~~~d~~t---G~~~W~ 168 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEAL-------SRPVV---SDGLVLIHTSNGQLQALNEAD---GAVKWT 168 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCC-------SCCEE---ETTEEEEECTTSEEEEEETTT---CCEEEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceE-------cCCEE---ECCEEEEEcCCCeEEEEECCC---CcEEEE
Confidence 345555555 9999999999988765544332110 11112 345778888899999999987 454444
Q ss_pred ecccccce-----eEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCC----eE---EEEEcC--CCCcEEEE
Q psy6213 93 FNDHKRTV-----NKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTES----VR---DVEFNP--HSPYAFAS 158 (330)
Q Consensus 93 ~~~~~~~i-----~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~----v~---~~~~~~--~~~~~~~~ 158 (330)
........ ..... .+..++.++.++.+..+|..+++.+......... +. .+.-.| .+. .++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~---~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~v~~ 244 (376)
T 3q7m_A 169 VNLDMPSLSLRGESAPTT---AFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNG-VVFA 244 (376)
T ss_dssp EECCC-----CCCCCCEE---ETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETT-EEEE
T ss_pred EeCCCCceeecCCCCcEE---ECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECC-EEEE
Confidence 43221111 12222 2456778888999999999999887666532110 00 000111 133 4777
Q ss_pred EecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceecc-ccceEEEEEcCC
Q psy6213 159 VSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINT-IASVSRIKWRPQ 237 (330)
Q Consensus 159 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~~~ 237 (330)
++.++.+..+|.+++ +...... ......+.. ++..++.++.++.+..+|..+++........ ..........
T Consensus 245 ~~~~g~l~~~d~~tG-~~~w~~~--~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~-- 317 (376)
T 3q7m_A 245 LAYNGNLTALDLRSG-QIMWKRE--LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY-- 317 (376)
T ss_dssp ECTTSCEEEEETTTC-CEEEEEC--CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE--
T ss_pred EecCcEEEEEECCCC-cEEeecc--CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE--
Confidence 788999999999874 3333332 223444444 3667888888999999999988654333211 1122222222
Q ss_pred CCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEE-EEEecCCCEEEEeecCCeEeeee
Q psy6213 238 RKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSG-LAWRGDPQLFIASSRVSIIPRAK 300 (330)
Q Consensus 238 ~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~l~s~~~dg~i~iw~ 300 (330)
+..++++. .+|.+..+|..+++. +.........+.. ... .+..|+.++.+|.|+.|+
T Consensus 318 ~~~l~v~~---~~g~l~~~d~~tG~~-~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 318 NGNLVVGD---SEGYLHWINVEDGRF-VAQQKVDSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp TTEEEEEC---TTSEEEEEETTTCCE-EEEEECCTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred CCEEEEEe---CCCeEEEEECCCCcE-EEEEecCCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 34445554 489999999999875 4444432333322 222 245788889999999885
No 240
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.26 E-value=6.1e-09 Score=81.37 Aligned_cols=193 Identities=9% Similarity=0.055 Sum_probs=133.0
Q ss_pred eeeeecccCCcEEEEEcC--CCcEEEEECCCCCCCceeEEecccc-cceeEEEEEecCCCEEEEEecCCcEEEEEeecCc
Q psy6213 55 NDVAWSCIEENHIATGAT--NGAVVVWNLGQISRSKQERVFNDHK-RTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQE 131 (330)
Q Consensus 55 ~~~~~~~~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~-~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~ 131 (330)
..++|+| ++.++++.+. ++.|.++|+.+ ++....+.... .....+++. ++.+.++.-.++.+.++|..+.+
T Consensus 24 ~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~t---g~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~ 97 (266)
T 2iwa_A 24 QGLVYAE-NDTLFESTGLYGRSSVRQVALQT---GKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS 97 (266)
T ss_dssp EEEEECS-TTEEEEEECSTTTCEEEEEETTT---CCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE
T ss_pred ccEEEeC-CCeEEEECCCCCCCEEEEEECCC---CCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCc
Confidence 6899998 6655554443 57899999998 56665554211 222345554 45555666678999999999999
Q ss_pred eeeeeecC-CCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCC-----CCeEEEEEcCCCCEEEEEecC
Q psy6213 132 STKIFHSN-TESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHS-----GPIFACDWHPEHAWLATASRD 205 (330)
Q Consensus 132 ~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~l~~~~~d 205 (330)
.+.++... .. ...++++++.+++ +..++.|.++|..+ .+....+.-.. ..++.+.|. ++...+....+
T Consensus 98 v~~~i~~g~~~---g~glt~Dg~~l~v-s~gs~~l~viD~~t-~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~ 171 (266)
T 2iwa_A 98 NIKNFTHQMKD---GWGLATDGKILYG-SDGTSILYEIDPHT-FKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQT 171 (266)
T ss_dssp EEEEEECCSSS---CCEEEECSSSEEE-ECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTS
T ss_pred EEEEEECCCCC---eEEEEECCCEEEE-ECCCCeEEEEECCC-CcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCC
Confidence 98888644 22 2346678886554 45688999999987 44444444211 236788888 67655555567
Q ss_pred CcEEEEeCCCCccccceecc-------------ccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCC
Q psy6213 206 KTIKVWDLSIKPSLEYSINT-------------IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRP 261 (330)
Q Consensus 206 g~i~i~d~~~~~~~~~~~~~-------------~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~ 261 (330)
+.|.+.|..+++......-. ......++|+|+++.+++++. ..+.+...++...
T Consensus 172 ~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk--~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 172 DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGK--LWPKLFEIKLHLV 238 (266)
T ss_dssp SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEET--TCSEEEEEEEEEC
T ss_pred CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECC--CCCeEEEEEEecc
Confidence 89999999998553332211 135689999999998888887 6899999888654
No 241
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.25 E-value=4.9e-08 Score=81.66 Aligned_cols=241 Identities=10% Similarity=-0.020 Sum_probs=145.7
Q ss_pred CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeE
Q psy6213 23 RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNK 102 (330)
Q Consensus 23 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~ 102 (330)
...|+..+++.......... . ..+..++|.+.++.++++-...+.|..+++.. ......+.........
T Consensus 95 ~~~I~~i~~~~~~~~~~~~~-------~-~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g---~~~~~~~~~~~~~p~g 163 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLNN-------L-ENAIALDFHHRRELVFWSDVTLDRILRANLNG---SNVEEVVSTGLESPGG 163 (386)
T ss_dssp BSCEEEECTTSCCCEEEECS-------C-SCEEEEEEETTTTEEEEEETTTTEEEEEETTS---CCEEEEECSSCSCCCC
T ss_pred CccceeeccCCCcEEEEecC-------C-CccEEEEEecCCCeEEEEeCCCCcEEEEecCC---CCcEEEEeCCCCCccE
Confidence 55677777765543322211 1 12478999984555555656678899999876 2222223323345577
Q ss_pred EEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecC-CcEEEEecCCCccceeeec
Q psy6213 103 VSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSEN-GTIQQWDVRRPEKCFYQFT 181 (330)
Q Consensus 103 i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-g~i~i~d~~~~~~~~~~~~ 181 (330)
+++.+.++.++++-...+.|.+.+++.......+.........+++.|.+.+++++-... +.|..+++... .......
T Consensus 164 lavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~~~~ 242 (386)
T 3v65_B 164 LAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-GRRIIAD 242 (386)
T ss_dssp EEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-SCEEEEC
T ss_pred EEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC-CcEEEEE
Confidence 888875566666666678899988875443333333445688999999887666665555 77888888742 2222222
Q ss_pred cCCCCeEEEEEcCCCCEEEE-EecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccC
Q psy6213 182 AHSGPIFACDWHPEHAWLAT-ASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260 (330)
Q Consensus 182 ~~~~~i~~~~~~~~~~~l~~-~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~ 260 (330)
..-...+.|+++|++..|+. -...+.|..+|+..................+++.. + .++.+.. ..+.|..++..+
T Consensus 243 ~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~~-~-~ly~td~--~~~~V~~~~~~~ 318 (386)
T 3v65_B 243 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVFE-D-SLYWTDW--HTKSINSANKFT 318 (386)
T ss_dssp SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEET-T-EEEEEET--TTTEEEEEETTT
T ss_pred CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEEC-C-EEEEeeC--CCCeEEEEECCC
Confidence 33445789999986655544 45667899999875433222222344567788833 3 4566655 588999998666
Q ss_pred CCccceEeecCCCCeEEEEE
Q psy6213 261 PYIPLASFTEHKDVVSGLAW 280 (330)
Q Consensus 261 ~~~~~~~~~~~~~~v~~~~~ 280 (330)
++. ...+........++++
T Consensus 319 G~~-~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 319 GKN-QEIIRNKLHFPMDIHT 337 (386)
T ss_dssp CCS-CEEEECSCSCCCCEEE
T ss_pred Ccc-eEEEccCCCCCceEEE
Confidence 654 4444333333444444
No 242
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.25 E-value=6.1e-09 Score=93.68 Aligned_cols=260 Identities=10% Similarity=0.097 Sum_probs=153.3
Q ss_pred CCCeeecC-CCeEEEEEcCCcceeeeeceeecccccccccee-eeeecccCCcEEEEEc------CCCcEEEEECCCCCC
Q psy6213 15 DNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCN-DVAWSCIEENHIATGA------TNGAVVVWNLGQISR 86 (330)
Q Consensus 15 ~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~------~dg~i~iw~~~~~~~ 86 (330)
+++.++.+ |+.|..+|.++|+..-.......... ...+. +... .+..++++. .+|.|..||..+
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~--~~~~~~sP~v---~~g~v~vg~~~~~~~~~g~v~a~D~~t--- 192 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKR--SYTITGAPRV---VNGKVVIGNGGAEFGVRGYVTAYDAET--- 192 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTS--CCBCCSCCEE---ETTEEEECCBCTTTCCBCEEEEEETTT---
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCC--CccccCCcEE---ECCEEEEEeCCCccCCCCEEEEEECCC---
Confidence 44445555 99999999999987765544201000 00011 1111 133444443 368899999988
Q ss_pred CceeEEecc-------------------------------cccceeEEEEEecCCCEEEEEecCCc--------------
Q psy6213 87 SKQERVFND-------------------------------HKRTVNKVSFHYVESNWLISGSQDGT-------------- 121 (330)
Q Consensus 87 ~~~~~~~~~-------------------------------~~~~i~~i~~~~~~~~~l~~~~~d~~-------------- 121 (330)
++.+-.+.. ....-..+++.| +.++++.+..++.
T Consensus 193 G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~ 271 (689)
T 1yiq_A 193 GKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDP-ELNLLYIGVGNGSLWDPKWRSQAKGDN 271 (689)
T ss_dssp CCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHHTTCSCC
T ss_pred CcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcC-CCCEEEEeCCCCCccccCCCCCCCCCc
Confidence 444433321 001112577887 6788888877753
Q ss_pred -----EEEEEeecCceeeeeecC--C-------CCeEEEEEcCCCC--cEEEEEecCCcEEEEecCCCccceeeecc---
Q psy6213 122 -----MRLFDIRCQESTKIFHSN--T-------ESVRDVEFNPHSP--YAFASVSENGTIQQWDVRRPEKCFYQFTA--- 182 (330)
Q Consensus 122 -----i~i~d~~~~~~~~~~~~~--~-------~~v~~~~~~~~~~--~~~~~~~~dg~i~i~d~~~~~~~~~~~~~--- 182 (330)
|..+|.++++.+-.++.. . .+........+++ ..++.++.+|.++++|.+++ +.+...+.
T Consensus 272 ~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG-~~l~~~~~~~~ 350 (689)
T 1yiq_A 272 LFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATG-ELLSAKGIVPQ 350 (689)
T ss_dssp TTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC-CEEEEEESSCC
T ss_pred eeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCC-CEecccccccc
Confidence 999999999988777642 1 1222222222342 25788899999999999884 33311100
Q ss_pred -------------------------CCC-----------CeEEEEEcCCCCEEEEEec----------------------
Q psy6213 183 -------------------------HSG-----------PIFACDWHPEHAWLATASR---------------------- 204 (330)
Q Consensus 183 -------------------------~~~-----------~i~~~~~~~~~~~l~~~~~---------------------- 204 (330)
... .-..++++|+..++++...
T Consensus 351 ~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (689)
T 1yiq_A 351 SWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMY 430 (689)
T ss_dssp SSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSC
T ss_pred ccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccccccccccccc
Confidence 000 0123788998888777632
Q ss_pred -----------------------CCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCC
Q psy6213 205 -----------------------DKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRP 261 (330)
Q Consensus 205 -----------------------dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~ 261 (330)
+|.|..||+.+++..... ....+.....+...+.. +..++ .|+.++.||.+++
T Consensus 431 ~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~-~~~~~~~~g~~~taggl-vf~gt--~dg~l~a~D~~tG 506 (689)
T 1yiq_A 431 QLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEV-PYVTIFNGGTLSTAGNL-VFEGS--ADGRVIAYAADTG 506 (689)
T ss_dssp CCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEE-EESSSCCCCEEEETTTE-EEEEC--TTSEEEEEETTTC
T ss_pred ccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEc-cCCCCccCccceECCCE-EEEEC--CCCcEEEEECCCC
Confidence 377999999988554333 22333333345555665 44455 6999999999999
Q ss_pred CccceEeecCCC-CeEEEEEecCCCEEEE
Q psy6213 262 YIPLASFTEHKD-VVSGLAWRGDPQLFIA 289 (330)
Q Consensus 262 ~~~~~~~~~~~~-~v~~~~~~~~~~~l~s 289 (330)
+. +..+....+ .-.-+.|..+|+..++
T Consensus 507 ~~-lw~~~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 507 EK-LWEQPAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp CE-EEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred cc-ceeeeCCCCcccCceEEEECCEEEEE
Confidence 87 555554322 2234667778874443
No 243
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.25 E-value=1.5e-08 Score=84.56 Aligned_cols=265 Identities=10% Similarity=0.033 Sum_probs=154.5
Q ss_pred CCCeeecC-CCeEEEEEcCCcceeeeeceeecccccc--ccce-eeeeecccCCcEEEEEcCCCcEEEEECCCCCCCcee
Q psy6213 15 DNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINL--NFSC-NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQE 90 (330)
Q Consensus 15 ~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~--~~~v-~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 90 (330)
++..+++. ++.|..+|.++++..-............ ...+ ..+.. .+..+++++.++.|..+|..+ ++..
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~v~~~~g~l~a~d~~t---G~~~ 126 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV---SGGHVYIGSEKAQVYALNTSD---GTVA 126 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE---ETTEEEEEETTSEEEEEETTT---CCEE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE---eCCEEEEEcCCCEEEEEECCC---CCEE
Confidence 44445555 8999999999988765554432110000 0011 11222 456778888899999999987 4554
Q ss_pred EEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCe-----EEEEEcCCCCcEEEEEecCCcE
Q psy6213 91 RVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV-----RDVEFNPHSPYAFASVSENGTI 165 (330)
Q Consensus 91 ~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v-----~~~~~~~~~~~~~~~~~~dg~i 165 (330)
-............... +..++.++.++.|..+|.++++.+.......... ...... + . .++.+..++.+
T Consensus 127 W~~~~~~~~~~~p~~~---~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~-~-~v~~g~~~g~l 200 (376)
T 3q7m_A 127 WQTKVAGEALSRPVVS---DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-F-G-AAVVGGDNGRV 200 (376)
T ss_dssp EEEECSSCCCSCCEEE---TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-T-T-EEEECCTTTEE
T ss_pred EEEeCCCceEcCCEEE---CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-C-C-EEEEEcCCCEE
Confidence 4443332222222222 4578888889999999999998877765432211 112222 2 3 47778889999
Q ss_pred EEEecCCCccceeeeccCC--C-----CeEEEEEcC--CCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcC
Q psy6213 166 QQWDVRRPEKCFYQFTAHS--G-----PIFACDWHP--EHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRP 236 (330)
Q Consensus 166 ~i~d~~~~~~~~~~~~~~~--~-----~i~~~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~ 236 (330)
..+|.+++ +..-...... + .+..+.-.| .+..++.++.++.+..+|.++++...... ......+...
T Consensus 201 ~~~d~~tG-~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~--~~~~~~~~~~- 276 (376)
T 3q7m_A 201 SAVLMEQG-QMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKRE--LGSVNDFIVD- 276 (376)
T ss_dssp EEEETTTC-CEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEEC--CCCEEEEEEE-
T ss_pred EEEECCCC-cEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeecc--CCCCCCceEE-
Confidence 99999874 3333332111 0 000011111 24677888889999999999885543222 1223344443
Q ss_pred CCCeEEEEeecccCCeEEEEEccCCCccceEee-cCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 237 QRKFHLASCSLVVDSSVNVWDIRRPYIPLASFT-EHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 237 ~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
+..++++. .++.+..+|..+++. .-... .....+..... .+..|+.++.+|.|+.++..
T Consensus 277 -~~~l~~~~---~~g~l~~~d~~tG~~-~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~ 336 (376)
T 3q7m_A 277 -GNRIYLVD---QNDRVMALTIDGGVT-LWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVE 336 (376)
T ss_dssp -TTEEEEEE---TTCCEEEEETTTCCE-EEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETT
T ss_pred -CCEEEEEc---CCCeEEEEECCCCcE-EEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECC
Confidence 44455555 489999999998875 33333 11222333333 35678888899999998743
No 244
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.23 E-value=5.2e-09 Score=80.78 Aligned_cols=181 Identities=12% Similarity=0.188 Sum_probs=124.1
Q ss_pred eeEEEEEecCCCEEEEEecCC--cEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccce
Q psy6213 100 VNKVSFHYVESNWLISGSQDG--TMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCF 177 (330)
Q Consensus 100 i~~i~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~ 177 (330)
...+.|+ ++.++.+.+.+| .|+.+|+++++.+..+.... ........+.++.+++..-.++.+.+||..+ .+.+
T Consensus 45 tqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t-~~~~ 120 (262)
T 3nol_A 45 TEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRN-LRQV 120 (262)
T ss_dssp EEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTT-CCEE
T ss_pred cceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECcc-CcEE
Confidence 4788887 567777777766 89999999999988887543 3333223334555677767789999999998 5666
Q ss_pred eeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceecc--c---cceEEEEEcCCCCeEEEEeecccCCe
Q psy6213 178 YQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINT--I---ASVSRIKWRPQRKFHLASCSLVVDSS 252 (330)
Q Consensus 178 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~--~---~~v~~~~~~~~~~~l~~~~~~~~~~~ 252 (330)
.++.... .-..++ ++++.|+.+..++.|.++|..+.+......-. . ..++.+.|. +|+ +.+..- .++.
T Consensus 121 ~ti~~~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-lyan~w--~~~~ 193 (262)
T 3nol_A 121 RSFNYDG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE-IFANVW--QTNK 193 (262)
T ss_dssp EEEECSS-CCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE-EEEEET--TSSE
T ss_pred EEEECCC-CceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE-EEEEEc--cCCe
Confidence 6665422 212333 56777777776788999999987554332221 1 334567776 665 566665 5889
Q ss_pred EEEEEccCCCccceEeecC------------CCCeEEEEEecCCCEEEEeec
Q psy6213 253 VNVWDIRRPYIPLASFTEH------------KDVVSGLAWRGDPQLFIASSR 292 (330)
Q Consensus 253 i~i~d~~~~~~~~~~~~~~------------~~~v~~~~~~~~~~~l~s~~~ 292 (330)
|.+.|..+++. +..+... ....++|+|+|+++.|+..+.
T Consensus 194 I~vIDp~tG~V-~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 194 IVRIDPETGKV-TGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEECTTTCBE-EEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEEEECCCCcE-EEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 99999999875 4444321 235799999998887777664
No 245
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.23 E-value=5.5e-09 Score=81.61 Aligned_cols=193 Identities=8% Similarity=0.090 Sum_probs=132.7
Q ss_pred ceEEEEeeCCCe-eecC---CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECC
Q psy6213 7 VHKHGLKADNGL-AQPS---RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLG 82 (330)
Q Consensus 7 v~~~~~s~~~~~-~~~g---d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 82 (330)
...++|+||+.+ +++| ++.|.++|+.+++........... + ...+++. ++.+.++...++.+.++|..
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~-----f-geGi~~~--g~~lyv~t~~~~~v~viD~~ 94 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSY-----F-GEGLTLL--NEKLYQVVWLKNIGFIYDRR 94 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTC-----C-EEEEEEE--TTEEEEEETTCSEEEEEETT
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCc-----c-eEEEEEe--CCEEEEEEecCCEEEEEECC
Confidence 478999998877 6665 689999999999988776543221 1 1345554 34555566678899999998
Q ss_pred CCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCC-----CCeEEEEEcCCCCcEEE
Q psy6213 83 QISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNT-----ESVRDVEFNPHSPYAFA 157 (330)
Q Consensus 83 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~ 157 (330)
+ .+.+..+...... ...+++ +++.++++..++.|.++|..+.+.+..+.... ..+..+.|. ++. +++
T Consensus 95 t---~~v~~~i~~g~~~--g~glt~-Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~-lyv 166 (266)
T 2iwa_A 95 T---LSNIKNFTHQMKD--GWGLAT-DGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE-VWA 166 (266)
T ss_dssp T---TEEEEEEECCSSS--CCEEEE-CSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEE
T ss_pred C---CcEEEEEECCCCC--eEEEEE-CCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE-EEE
Confidence 8 6666666432122 233555 45555555568899999999988877766322 136678888 564 666
Q ss_pred EEecCCcEEEEecCCCccceeeeccC-------------CCCeEEEEEcCCCCE-EEEEecCCcEEEEeCCCC
Q psy6213 158 SVSENGTIQQWDVRRPEKCFYQFTAH-------------SGPIFACDWHPEHAW-LATASRDKTIKVWDLSIK 216 (330)
Q Consensus 158 ~~~~dg~i~i~d~~~~~~~~~~~~~~-------------~~~i~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~ 216 (330)
....++.|.+.|..+ ++.+..+... ....+.++|+|+++. ++++...+.+...++...
T Consensus 167 n~~~~~~V~vID~~t-g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 167 NIWQTDCIARISAKD-GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EETTSSEEEEEETTT-CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred ecCCCCeEEEEECCC-CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 666788999999998 5555555421 135689999998865 555557788888888665
No 246
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.19 E-value=2e-07 Score=76.86 Aligned_cols=234 Identities=9% Similarity=-0.055 Sum_probs=146.7
Q ss_pred eeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceee
Q psy6213 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTK 134 (330)
Q Consensus 55 ~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 134 (330)
+|.+..+ +. .|+.+. ...|+..++.. ........ .......++|.+.++.++++-...+.|+.+++.......
T Consensus 37 ~C~~~~~-~~-~ll~~~-~~~I~~i~~~g---~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~ 109 (349)
T 3v64_C 37 SCKALGP-EP-VLLFAN-RIDIRQVLPHR---SEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE 109 (349)
T ss_dssp CEEESSS-CC-EEEEEC-BSCEEEECTTS---CCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred ccccccc-Cc-eeEeec-ccceEEEeCCC---CeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceE
Confidence 4444444 33 444443 34577777765 23322233 334578999997455555565667889999987665444
Q ss_pred eeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEE-EEecC-CcEEEEe
Q psy6213 135 IFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLA-TASRD-KTIKVWD 212 (330)
Q Consensus 135 ~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~-~~~~d-g~i~i~d 212 (330)
...........+++.+.+..++++-...+.|.+.++... ...............++++|.+..|+ +-... +.|..++
T Consensus 110 ~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~-~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~ 188 (349)
T 3v64_C 110 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA-HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASS 188 (349)
T ss_dssp EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEE
T ss_pred EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCC-ceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEe
Confidence 333333456789999877766777777788999998752 22222333345678999999655544 44444 7788888
Q ss_pred CCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeec
Q psy6213 213 LSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSR 292 (330)
Q Consensus 213 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 292 (330)
+..................++++|++..|+.+-. ..+.|..+|+..... ............++++. ++.+.++-..
T Consensus 189 ~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~--~~~~I~~~~~dG~~~-~~~~~~~~~~P~giav~-~~~ly~td~~ 264 (349)
T 3v64_C 189 MDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDA--KHHVIERANLDGSHR-KAVISQGLPHPFAITVF-EDSLYWTDWH 264 (349)
T ss_dssp TTSCSCEESCCSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSC-EEEECSSCSSEEEEEEE-TTEEEEEETT
T ss_pred CCCCCcEEEEECCCCCcceEEEeCCCCEEEEEEC--CCCEEEEEeCCCCce-EEEEeCCCCCceEEEEE-CCEEEEecCC
Confidence 8765332222223456889999998887777776 688999999875432 22233334456788883 4555555555
Q ss_pred CCeEeeee
Q psy6213 293 VSIIPRAK 300 (330)
Q Consensus 293 dg~i~iw~ 300 (330)
.+.|...+
T Consensus 265 ~~~V~~~~ 272 (349)
T 3v64_C 265 TKSINSAN 272 (349)
T ss_dssp TTEEEEEE
T ss_pred CCeEEEEE
Confidence 66776664
No 247
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.17 E-value=9.7e-09 Score=79.26 Aligned_cols=180 Identities=9% Similarity=0.077 Sum_probs=124.6
Q ss_pred eeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceee
Q psy6213 100 VNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQ 179 (330)
Q Consensus 100 i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~ 179 (330)
...+.|+ ++.++.+.+.+|.|+.+|+++++.+..+ ... ........+.++.+++..-.++.+.+||..+ .+.+.+
T Consensus 57 tqGL~~~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~-~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~T-l~~~~t 131 (268)
T 3nok_A 57 TQGLVFH--QGHFFESTGHQGTLRQLSLESAQPVWME-RLG-NIFAEGLASDGERLYQLTWTEGLLFTWSGMP-PQRERT 131 (268)
T ss_dssp EEEEEEE--TTEEEEEETTTTEEEECCSSCSSCSEEE-ECT-TCCEEEEEECSSCEEEEESSSCEEEEEETTT-TEEEEE
T ss_pred cceEEEE--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCC-CcceeEEEEeCCEEEEEEccCCEEEEEECCc-CcEEEE
Confidence 4688887 5788888888999999999999988877 333 3333223334555777777899999999998 566666
Q ss_pred eccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceec--c---ccceEEEEEcCCCCeEEEEeecccCCeEE
Q psy6213 180 FTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSIN--T---IASVSRIKWRPQRKFHLASCSLVVDSSVN 254 (330)
Q Consensus 180 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--~---~~~v~~~~~~~~~~~l~~~~~~~~~~~i~ 254 (330)
+... ..-..++ ++++.|+.+..++.|.++|..+.+......- . -..++.+.|. +|+ +.+..- .++.|.
T Consensus 132 i~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~-lyanvw--~s~~I~ 204 (268)
T 3nok_A 132 TRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV-IYANIW--HSSDVL 204 (268)
T ss_dssp EECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEEEET--TCSEEE
T ss_pred EeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE-EEEEEC--CCCeEE
Confidence 6642 2223444 5678888877789999999998855333222 1 1245677777 665 566665 588999
Q ss_pred EEEccCCCccceEeec-------------CCCCeEEEEEecCCCEEEEeec
Q psy6213 255 VWDIRRPYIPLASFTE-------------HKDVVSGLAWRGDPQLFIASSR 292 (330)
Q Consensus 255 i~d~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~s~~~ 292 (330)
+.|..+++. +..+.. .....++|||+|+++.|+..+.
T Consensus 205 vIDp~TG~V-~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 205 EIDPATGTV-VGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EECTTTCBE-EEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EEeCCCCcE-EEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 999999875 444432 1246799999997666665553
No 248
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.16 E-value=7.2e-07 Score=82.00 Aligned_cols=276 Identities=9% Similarity=0.062 Sum_probs=172.3
Q ss_pred cccceEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECC
Q psy6213 4 LSPVHKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLG 82 (330)
Q Consensus 4 ~~~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 82 (330)
...|.++...++|.+.++. ++.+.+||..+++.............-....|.++...+ ++.+. .|+.+ -|.+|+..
T Consensus 214 ~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~lW-igt~~-Gl~~~~~~ 290 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDS-QNRLW-IGTFN-DLNIYHEG 290 (795)
T ss_dssp CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECT-TSCEE-EEESS-CEEEEETT
T ss_pred CCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcC-CCCEE-EEeCC-hhheEcCC
Confidence 3468888888888884444 555888998876544322111000001123478888876 55544 45555 48889876
Q ss_pred CCCCCceeEEec-------ccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeec-------CCCCeEEEEE
Q psy6213 83 QISRSKQERVFN-------DHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHS-------NTESVRDVEF 148 (330)
Q Consensus 83 ~~~~~~~~~~~~-------~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------~~~~v~~~~~ 148 (330)
+ ........ .....|.++...+ ++. |..|+.++-|..|+..+.... .+.. ....|.++..
T Consensus 291 ~---~~~~~~~~~~~~~~~l~~~~i~~i~~D~-~g~-lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~ 364 (795)
T 4a2l_A 291 T---DSFASYSSNPVENGSLSQRSVRSIFMDS-QGG-MWLGTYFGGLNYYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVE 364 (795)
T ss_dssp T---TEEEEECCCTTSTTSCSSSCEEEEEECT-TSC-EEEEESSSCEEEECGGGGSSE-EECCCTTSSSCSCSSEEEEEE
T ss_pred C---CeEEEEecCCCCCCCCCCCcEEEEEEeC-CcC-EEEEECCCCeEEeCCCcccce-EEcCCCCCCCCCCCeeEEEEE
Confidence 5 33222111 1235688888775 444 666777778999987655422 2211 2356899998
Q ss_pred cCCCCcEEEEEecCCcEEEEecCCCccceeeec---------cCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccc
Q psy6213 149 NPHSPYAFASVSENGTIQQWDVRRPEKCFYQFT---------AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSL 219 (330)
Q Consensus 149 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~---------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 219 (330)
.+++. +..|+.++-|..||..+. . ...+. .....|.++...++++.|..|+.++-|..||..+++..
T Consensus 365 d~~g~--lWiGt~~~Gl~~~~~~~~-~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~ 440 (795)
T 4a2l_A 365 DKDKN--LWIGTNDGGLNLYNPITQ-R-FTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVE 440 (795)
T ss_dssp CTTSC--EEEEESSSCEEEECTTTC-C-EEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEE
T ss_pred CCCCC--EEEEECCCCeEEEcCCCC-c-EEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEE
Confidence 88886 667888878999998763 2 22221 12357899999888886777887777999998876432
Q ss_pred ccee----ccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEee-------cCCCCeEEEEEecCCCEEE
Q psy6213 220 EYSI----NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFT-------EHKDVVSGLAWRGDPQLFI 288 (330)
Q Consensus 220 ~~~~----~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~l~ 288 (330)
.... .....|.++...++|.. .++. . +.|..||..++.. ..+. .....|.++...++|++.+
T Consensus 441 ~~~~~~~~l~~~~v~~i~~d~~g~l-wigt---~-~Gl~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi 513 (795)
T 4a2l_A 441 NFNQRNSQLVNENVYAILPDGEGNL-WLGT---L-SALVRFNPEQRSF--TTIEKEKDGTPVVSKQITTLFRDSHKRLWI 513 (795)
T ss_dssp EECTTTSCCSCSCEEEEEECSSSCE-EEEE---S-SCEEEEETTTTEE--EECCBCTTCCBCCCCCEEEEEECTTCCEEE
T ss_pred EeecCCCCcCCCeeEEEEECCCCCE-EEEe---c-CceeEEeCCCCeE--EEccccccccccCCceEEEEEECCCCCEEE
Confidence 2211 12457899999998884 4443 2 4588899876542 2221 1235789999998888666
Q ss_pred EeecCCeEeeeec
Q psy6213 289 ASSRVSIIPRAKN 301 (330)
Q Consensus 289 s~~~dg~i~iw~~ 301 (330)
... +| |..|+.
T Consensus 514 gt~-~G-l~~~~~ 524 (795)
T 4a2l_A 514 GGE-EG-LSVFKQ 524 (795)
T ss_dssp EES-SC-EEEEEE
T ss_pred EeC-Cc-eEEEeC
Confidence 544 44 666654
No 249
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.14 E-value=1.2e-07 Score=79.38 Aligned_cols=226 Identities=8% Similarity=-0.057 Sum_probs=144.2
Q ss_pred cEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeE
Q psy6213 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVR 144 (330)
Q Consensus 65 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~ 144 (330)
.+|+.+. ...|+.+++.. ........ .......++|.+.++.++++-...+.|+.+++........+........
T Consensus 88 ~~l~~~~-~~~I~~i~~~~---~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~ 162 (386)
T 3v65_B 88 PVLLFAN-RIDIRQVLPHR---SEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG 162 (386)
T ss_dssp CEEEEEC-BSCEEEECTTS---CCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCC
T ss_pred ceeEeec-CccceeeccCC---CcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCcc
Confidence 3444443 35688888765 22222222 3355789999974555666666678899999876654443333334567
Q ss_pred EEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEe-cC-CcEEEEeCCCCccccce
Q psy6213 145 DVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS-RD-KTIKVWDLSIKPSLEYS 222 (330)
Q Consensus 145 ~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d-g~i~i~d~~~~~~~~~~ 222 (330)
.+++.+.+..++++-...+.|.+.++.. ......+.........++++|.+..|+... .. +.|..+++.........
T Consensus 163 glavd~~~g~lY~~d~~~~~I~~~~~dg-~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 241 (386)
T 3v65_B 163 GLAVDWVHDKLYWTDSGTSRIEVANLDG-AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIA 241 (386)
T ss_dssp CEEEETTTTEEEEEETTTTEEEECBTTS-CSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred EEEEEeCCCeEEEEcCCCCeEEEEeCCC-CceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEE
Confidence 7899987776677767778899988874 222222333345678999998666555544 44 67888888765332222
Q ss_pred eccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeee
Q psy6213 223 INTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAK 300 (330)
Q Consensus 223 ~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~ 300 (330)
.........++++|++..|+.+-. ..+.|..+|+..... ............++++. ++.++++-...+.|..+.
T Consensus 242 ~~~~~~PnGlavd~~~~~lY~aD~--~~~~I~~~d~dG~~~-~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 242 DTHLFWPNGLTIDYAGRRMYWVDA--KHHVIERANLDGSHR-KAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp CSSCSCEEEEEEEGGGTEEEEEET--TTTEEEEECTTSCSC-EEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred ECCCCCeeeEEEeCCCCEEEEEEC--CCCEEEEEeCCCCee-EEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEE
Confidence 233456889999998887777776 688999999875432 22333334456788883 455555655667777765
No 250
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.13 E-value=1.2e-06 Score=80.63 Aligned_cols=269 Identities=7% Similarity=0.103 Sum_probs=168.7
Q ss_pred ceEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCC
Q psy6213 7 VHKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQIS 85 (330)
Q Consensus 7 v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~ 85 (330)
|.++...++|.+.++. ++.+..|+..+++........ ....|.++...+ ++.+ ..|+.++.+..||..+
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~------~~~~i~~i~~d~-~g~l-wigt~~~Gl~~~~~~~-- 244 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPIL------GTKQIQAILQQS-PTRI-WVATEGAGLFLINPKT-- 244 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC----------CCCEEEEEEEE-TTEE-EEEEBSSCEEEEETTT--
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecCCC------CCCeeEEEEEcC-CCCE-EEEECCCCeEEEeCCC--
Confidence 8888888899884444 556888998876654322111 112357777765 5554 4455444488899765
Q ss_pred CCceeEEecc-------cccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeee-------cCCCCeEEEEEcCC
Q psy6213 86 RSKQERVFND-------HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFH-------SNTESVRDVEFNPH 151 (330)
Q Consensus 86 ~~~~~~~~~~-------~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-------~~~~~v~~~~~~~~ 151 (330)
.+....... ....|.++...+ ++. |..|+.+ -|.+||..+++...... .....|.++...++
T Consensus 245 -~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~ 320 (795)
T 4a2l_A 245 -KEIKNYLHSPSNPKSISSNYIRSLAMDS-QNR-LWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQ 320 (795)
T ss_dssp -TEEEEECCCTTCTTSCSCSBEEEEEECT-TSC-EEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTT
T ss_pred -CeEEEeecCCCCccccCCCeEEEEEEcC-CCC-EEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCC
Confidence 222221111 135688888775 555 5555555 58899987665433221 12356999999998
Q ss_pred CCcEEEEEecCCcEEEEecCCCccceeeecc-------CCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcccccee-
Q psy6213 152 SPYAFASVSENGTIQQWDVRRPEKCFYQFTA-------HSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI- 223 (330)
Q Consensus 152 ~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~-------~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~- 223 (330)
|. +..|+.++-|..++..+.. ...+.. ....|.++...++|. |..|+.++-|..||..+.+......
T Consensus 321 g~--lWigt~~~Gl~~~~~~~~~--~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~ 395 (795)
T 4a2l_A 321 GG--MWLGTYFGGLNYYHPIRNR--FKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQ 395 (795)
T ss_dssp SC--EEEEESSSCEEEECGGGGS--SEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC
T ss_pred cC--EEEEECCCCeEEeCCCccc--ceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecC
Confidence 86 6778887889999876522 111211 235689999888876 5567777779999987663322211
Q ss_pred -------ccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEee-----cCCCCeEEEEEecCCCEEEEee
Q psy6213 224 -------NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFT-----EHKDVVSGLAWRGDPQLFIASS 291 (330)
Q Consensus 224 -------~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~~ 291 (330)
-....|.++...+++..+.++. .++.|..||..+++. ..+. .....|.++...++|.+.+..
T Consensus 396 ~~~~~~~l~~~~v~~i~~d~~g~~lWigt---~~~Gl~~~d~~~~~~--~~~~~~~~~l~~~~v~~i~~d~~g~lwigt- 469 (795)
T 4a2l_A 396 EDESARGIGSNNIKAVYVDEKKSLVYIGT---HAGGLSILHRNSGQV--ENFNQRNSQLVNENVYAILPDGEGNLWLGT- 469 (795)
T ss_dssp ------CCSCSCEEEEEEETTTTEEEEEE---TTTEEEEEETTTCCE--EEECTTTSCCSCSCEEEEEECSSSCEEEEE-
T ss_pred CCCcccCCCCccEEEEEEcCCCCEEEEEe---CcCceeEEeCCCCcE--EEeecCCCCcCCCeeEEEEECCCCCEEEEe-
Confidence 1235689999999988324443 367899999887653 2222 234579999998888766554
Q ss_pred cCCeEeeeec
Q psy6213 292 RVSIIPRAKN 301 (330)
Q Consensus 292 ~dg~i~iw~~ 301 (330)
.+| |.+|+.
T Consensus 470 ~~G-l~~~~~ 478 (795)
T 4a2l_A 470 LSA-LVRFNP 478 (795)
T ss_dssp SSC-EEEEET
T ss_pred cCc-eeEEeC
Confidence 444 666654
No 251
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.12 E-value=6.5e-08 Score=74.05 Aligned_cols=191 Identities=12% Similarity=0.126 Sum_probs=126.6
Q ss_pred eeEEecccc--cceeEEEEEecCCCEEEEEecCC--cEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCc
Q psy6213 89 QERVFNDHK--RTVNKVSFHYVESNWLISGSQDG--TMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGT 164 (330)
Q Consensus 89 ~~~~~~~~~--~~i~~i~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~ 164 (330)
.+..+ .|. .-...+.|+ ++.++.+.+.+| .|+.+|+.+++.+........ .......+.++.++...-.++.
T Consensus 11 v~~~~-phd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~-~fgeGi~~~~~~ly~ltw~~~~ 86 (243)
T 3mbr_X 11 VVKRY-PHDTTAFTEGLFYL--RGHLYESTGETGRSSVRKVDLETGRILQRAEVPPP-YFGAGIVAWRDRLIQLTWRNHE 86 (243)
T ss_dssp EEEEE-ECCTTCCEEEEEEE--TTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTT-CCEEEEEEETTEEEEEESSSSE
T ss_pred EEEEc-CCCCccccccEEEE--CCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCC-cceeEEEEeCCEEEEEEeeCCE
Confidence 34444 354 346688988 466677777654 899999999999888865433 2222223335557777778999
Q ss_pred EEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceecc-----ccceEEEEEcCCCC
Q psy6213 165 IQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINT-----IASVSRIKWRPQRK 239 (330)
Q Consensus 165 i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~~~v~~~~~~~~~~ 239 (330)
+.+||.++ .+.+.++.... .-..++ ++++.|+.+..++.|.++|..+.+......-. -..++.+.+. +|+
T Consensus 87 v~v~D~~t-l~~~~ti~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~ 161 (243)
T 3mbr_X 87 GFVYDLAT-LTPRARFRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE 161 (243)
T ss_dssp EEEEETTT-TEEEEEEECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE
T ss_pred EEEEECCc-CcEEEEEeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE
Confidence 99999988 56666666432 223444 56777777777899999999988553332221 1345667766 555
Q ss_pred eEEEEeecccCCeEEEEEccCCCccceEeec-------------CCCCeEEEEEecCCCEEEEeec
Q psy6213 240 FHLASCSLVVDSSVNVWDIRRPYIPLASFTE-------------HKDVVSGLAWRGDPQLFIASSR 292 (330)
Q Consensus 240 ~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~-------------~~~~v~~~~~~~~~~~l~s~~~ 292 (330)
+++..- .+..|.+.|..+++. +..+.. .....++|+++|+++.|...+.
T Consensus 162 -lyanvw--~s~~I~vIDp~tG~V-~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 162 -LLANVW--LTSRIARIDPASGKV-VAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp -EEEEET--TTTEEEEECTTTCBE-EEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred -EEEEEC--CCCeEEEEECCCCCE-EEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 566664 588999999999875 444331 1236799999998777766654
No 252
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.11 E-value=8e-07 Score=72.16 Aligned_cols=226 Identities=12% Similarity=0.001 Sum_probs=140.6
Q ss_pred EEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeec----CceeeeeecCCC
Q psy6213 66 HIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC----QESTKIFHSNTE 141 (330)
Q Consensus 66 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~~ 141 (330)
+|+.+.. ..|+..++.. ......+. .-.....++|.+.++.++++-...+.|..+++.. ......+...-.
T Consensus 3 ~ll~~~~-~~I~~i~~~~---~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 77 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDR---SEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 77 (316)
T ss_dssp EEEEECB-SSEEEEETTS---CCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCS
T ss_pred EEEEECC-CeEEEEECCC---cceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCC
Confidence 3444443 4688899886 33333333 3456789999974455566666678999999875 222222322224
Q ss_pred CeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEec-C-CcEEEEeCCCCccc
Q psy6213 142 SVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASR-D-KTIKVWDLSIKPSL 219 (330)
Q Consensus 142 ~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-g~i~i~d~~~~~~~ 219 (330)
....+++.+.+..++++-...+.|.++++.. ................++++|.+..|+.+.. . +.|..+++......
T Consensus 78 ~p~glavd~~~~~ly~~d~~~~~I~~~~~~g-~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~ 156 (316)
T 1ijq_A 78 APDGLAVDWIHSNIYWTDSVLGTVSVADTKG-VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 156 (316)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTS-SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred CcCEEEEeecCCeEEEEECCCCEEEEEeCCC-CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeE
Confidence 5678999876665667767788999999874 2222223323456789999996665555543 3 67888887654222
Q ss_pred cceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeec--CCCCeEEEEEecCCCEEEEeecCCeEe
Q psy6213 220 EYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTE--HKDVVSGLAWRGDPQLFIASSRVSIIP 297 (330)
Q Consensus 220 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~ 297 (330)
............++++|++..|+.+-. ..+.|..+|+..... ...... ......++++. .+.+.++-...+.|.
T Consensus 157 ~~~~~~~~~P~gla~d~~~~~lY~~D~--~~~~I~~~d~dg~~~-~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~ 232 (316)
T 1ijq_A 157 SLVTENIQWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIF 232 (316)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEE
T ss_pred EEEECCCCCceEEEEeccCCEEEEEEC--CCCeEEEEecCCCce-EEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEE
Confidence 222223456889999998887777776 678999999975432 122221 22346788885 355555555667787
Q ss_pred eeec
Q psy6213 298 RAKN 301 (330)
Q Consensus 298 iw~~ 301 (330)
.++.
T Consensus 233 ~~~~ 236 (316)
T 1ijq_A 233 SANR 236 (316)
T ss_dssp EEET
T ss_pred EEeC
Confidence 7754
No 253
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.08 E-value=3.5e-08 Score=76.19 Aligned_cols=178 Identities=15% Similarity=0.209 Sum_probs=119.6
Q ss_pred eEEEEeeCCCe-eecC-CC--eEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCC
Q psy6213 8 HKHGLKADNGL-AQPS-RN--VFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQ 83 (330)
Q Consensus 8 ~~~~~s~~~~~-~~~g-d~--~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 83 (330)
..+.|+ ++.+ .++| +| .|+++|+++++......+.... +. ..++.. ++.+.++...++.+.+||..+
T Consensus 46 qGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~-----Fg-eGit~~--g~~ly~ltw~~~~v~v~D~~t 116 (262)
T 3nol_A 46 EGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRY-----FG-EGISDW--KDKIVGLTWKNGLGFVWNIRN 116 (262)
T ss_dssp EEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTC-----CE-EEEEEE--TTEEEEEESSSSEEEEEETTT
T ss_pred ceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCcc-----ce-eEEEEe--CCEEEEEEeeCCEEEEEECcc
Confidence 678888 6766 7777 65 9999999999988777554211 11 233443 345555555688999999988
Q ss_pred CCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecC--C---CCeEEEEEcCCCCcEEEE
Q psy6213 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSN--T---ESVRDVEFNPHSPYAFAS 158 (330)
Q Consensus 84 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~---~~v~~~~~~~~~~~~~~~ 158 (330)
.+.+.++.... .-..++ + +++.|+.+..++.|.++|..+.+.+..+... . ..++.+.|. +|. +++.
T Consensus 117 ---~~~~~ti~~~~-eG~glt--~-dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~-lyan 187 (262)
T 3nol_A 117 ---LRQVRSFNYDG-EGWGLT--H-NDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE-IFAN 187 (262)
T ss_dssp ---CCEEEEEECSS-CCCCEE--E-CSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE-EEEE
T ss_pred ---CcEEEEEECCC-CceEEe--c-CCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE-EEEE
Confidence 67776665422 223444 4 4555555555788999999998887776542 2 234567776 564 6666
Q ss_pred EecCCcEEEEecCCCccceeeeccC------------CCCeEEEEEcCCCCEEEEEec
Q psy6213 159 VSENGTIQQWDVRRPEKCFYQFTAH------------SGPIFACDWHPEHAWLATASR 204 (330)
Q Consensus 159 ~~~dg~i~i~d~~~~~~~~~~~~~~------------~~~i~~~~~~~~~~~l~~~~~ 204 (330)
.-.+..|.+.|.++ ++.+..+... ....+.|+|+|+++.|++.+.
T Consensus 188 ~w~~~~I~vIDp~t-G~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 188 VWQTNKIVRIDPET-GKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp ETTSSEEEEECTTT-CBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EccCCeEEEEECCC-CcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 66788999999988 4544443321 235689999998887777775
No 254
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.08 E-value=2e-07 Score=76.07 Aligned_cols=233 Identities=12% Similarity=0.057 Sum_probs=141.7
Q ss_pred eeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEec--------------------ccccceeEEEEEecCCCEEE
Q psy6213 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFN--------------------DHKRTVNKVSFHYVESNWLI 114 (330)
Q Consensus 55 ~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~--------------------~~~~~i~~i~~~~~~~~~l~ 114 (330)
.+++|.+ ++++++++..++.|..|+... ... ..+. ........+++.+ +...|+
T Consensus 22 ~~i~~d~-~g~~l~v~~~~~~i~~~~~~~---~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~-~~g~l~ 95 (322)
T 2fp8_A 22 NSFTFDS-TNKGFYTSVQDGRVIKYEGPN---SGF-VDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNL-QNNQLY 95 (322)
T ss_dssp CCEECCT-TCSSEEEECTTSEEEEECCTT---TCE-EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEET-TTTEEE
T ss_pred eEEEEcC-CCCEEEEEcCCCeEEEECCCC---Cce-EEEecccccccccccccccchhccccCCCCceEEEcC-CCCcEE
Confidence 7789998 788788888899999998765 222 1111 0113578899885 334455
Q ss_pred EEecCCcEEEEEeecCceeeeeec-----CCCCeEEEEEcC-CCCcEEEEEec-----------------CCcEEEEecC
Q psy6213 115 SGSQDGTMRLFDIRCQESTKIFHS-----NTESVRDVEFNP-HSPYAFASVSE-----------------NGTIQQWDVR 171 (330)
Q Consensus 115 ~~~~d~~i~i~d~~~~~~~~~~~~-----~~~~v~~~~~~~-~~~~~~~~~~~-----------------dg~i~i~d~~ 171 (330)
.+...+.|..+|..+++. ..+.. .......+++.+ ++. ++++-.. ++.|..+|..
T Consensus 96 v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~ 173 (322)
T 2fp8_A 96 IVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPS 173 (322)
T ss_dssp EEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETT
T ss_pred EEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCC
Confidence 555555688888765432 22211 113468899999 886 4554322 3678888876
Q ss_pred CCccceeeeccCCCCeEEEEEcCCCCEEEEE-ecCCcEEEEeCCCCcc--ccceeccccceEEEEEcCCCCeEEEEeec-
Q psy6213 172 RPEKCFYQFTAHSGPIFACDWHPEHAWLATA-SRDKTIKVWDLSIKPS--LEYSINTIASVSRIKWRPQRKFHLASCSL- 247 (330)
Q Consensus 172 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~~~~- 247 (330)
+. .. ..+.........++++|+++.|+.+ ...+.|..|++..... ......... ...+++.++|.. .++...
T Consensus 174 ~~-~~-~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l-~va~~~~ 249 (322)
T 2fp8_A 174 TK-ET-TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHF-WVSSSEE 249 (322)
T ss_dssp TT-EE-EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCE-EEEEEEE
T ss_pred CC-EE-EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCE-EEEecCc
Confidence 52 22 2222222345679999999866555 5668999999875321 111111223 788999999985 444430
Q ss_pred -------ccCCeEEEEEccCCCccceEeecCC----CCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 248 -------VVDSSVNVWDIRRPYIPLASFTEHK----DVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 248 -------~~~~~i~i~d~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
...+.|..+|.. ++. +..+.... ..+.++++ .++++.++....+.|.+++..
T Consensus 250 ~~~~~~~~~~~~v~~~d~~-G~~-~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 250 LDGNMHGRVDPKGIKFDEF-GNI-LEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp TTSSTTSCEEEEEEEECTT-SCE-EEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred ccccccCCCccEEEEECCC-CCE-EEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecc
Confidence 013567888764 433 44444332 34666766 466666666677888888754
No 255
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.08 E-value=1.1e-06 Score=71.38 Aligned_cols=231 Identities=8% Similarity=-0.005 Sum_probs=140.9
Q ss_pred ecCCCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccc
Q psy6213 20 QPSRNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRT 99 (330)
Q Consensus 20 ~~gd~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~ 99 (330)
.+....|+..+++.............. ...+++|.+.++.++.+-...+.|..++...... ....+...-..
T Consensus 9 ~~~~~~I~~i~l~~~~~~~~~~~~~~~------~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~--~~~~~~~~l~~ 80 (318)
T 3sov_A 9 YANRRDLRLVDATNGKENATIVVGGLE------DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES--VQNVVVSGLLS 80 (318)
T ss_dssp EECEEEEEEEETTCTTSCCEEEEEEEE------EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSC--CCEEEEECCSC
T ss_pred EEccCeEEEEECCCCceEEEEEecCCC------ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCc--eEEEEcCCCCC
Confidence 333677888888875311111111111 1378999984556666666778899999876311 11122222245
Q ss_pred eeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEe-cCCcEEEEecCCCcccee
Q psy6213 100 VNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVS-ENGTIQQWDVRRPEKCFY 178 (330)
Q Consensus 100 i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~dg~i~i~d~~~~~~~~~ 178 (330)
...+++.+.+++++++-...+.|.+++++.................+++.|.+.+++.+-. ..+.|...++... ....
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-~~~~ 159 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-SRFI 159 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC-SCEE
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC-CeEE
Confidence 6778888646666666667789999998754333333334456789999998775555442 3578888887642 2122
Q ss_pred eeccCCCCeEEEEEcCCCCEEEEE-ecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEE
Q psy6213 179 QFTAHSGPIFACDWHPEHAWLATA-SRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWD 257 (330)
Q Consensus 179 ~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d 257 (330)
.....-...+.++++|++..|..+ +..+.|..+|+..................+++..+ .++.+.. ..+.|..++
T Consensus 160 ~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~~--~lywtd~--~~~~V~~~~ 235 (318)
T 3sov_A 160 IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDW--STHSILACN 235 (318)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEETT--EEEEEET--TTTEEEEEE
T ss_pred EEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeCC--EEEEEec--CCCeEEEEE
Confidence 222233457899999966655544 46678999998754332222223455677777543 4566655 588999999
Q ss_pred ccCCCc
Q psy6213 258 IRRPYI 263 (330)
Q Consensus 258 ~~~~~~ 263 (330)
..+++.
T Consensus 236 ~~~G~~ 241 (318)
T 3sov_A 236 KYTGEG 241 (318)
T ss_dssp TTTCCS
T ss_pred CCCCCc
Confidence 877654
No 256
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.07 E-value=2.7e-06 Score=69.05 Aligned_cols=229 Identities=9% Similarity=0.038 Sum_probs=138.6
Q ss_pred cCCCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCce-eEEecccccc
Q psy6213 21 PSRNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQ-ERVFNDHKRT 99 (330)
Q Consensus 21 ~gd~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~-~~~~~~~~~~ 99 (330)
+..+.|+..++++.+....... ...+..++|.+.++.++++-..++.|..+++........ ...+...-..
T Consensus 7 ~~~~~I~~i~~~~~~~~~~~~~--------~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 78 (316)
T 1ijq_A 7 TNRHEVRKMTLDRSEYTSLIPN--------LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA 78 (316)
T ss_dssp ECBSSEEEEETTSCCCEEEECS--------CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSC
T ss_pred ECCCeEEEEECCCcceEehhcC--------CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCC
Confidence 3356788889887664433211 112478999983445555556678899998865110011 1122222245
Q ss_pred eeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecC-CcEEEEecCCCcccee
Q psy6213 100 VNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSEN-GTIQQWDVRRPEKCFY 178 (330)
Q Consensus 100 i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-g~i~i~d~~~~~~~~~ 178 (330)
...+++.+.+++++++-...+.|.++++........+.........++++|.+.+++++.... +.|...++.. ....
T Consensus 79 p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG--~~~~ 156 (316)
T 1ijq_A 79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG--VDIY 156 (316)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS--CCEE
T ss_pred cCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC--CCeE
Confidence 678888864556666666778999999875443333333445678999999777666555443 6888888764 2222
Q ss_pred ee-ccCCCCeEEEEEcCCCCEEEEEe-cCCcEEEEeCCCCcccccee--ccccceEEEEEcCCCCeEEEEeecccCCeEE
Q psy6213 179 QF-TAHSGPIFACDWHPEHAWLATAS-RDKTIKVWDLSIKPSLEYSI--NTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254 (330)
Q Consensus 179 ~~-~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~ 254 (330)
.+ ...-...+.++++|++..|+.+. ..+.|..+|+.......... ........+++.. ..++.+.. ..+.|.
T Consensus 157 ~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~--~~ly~~d~--~~~~V~ 232 (316)
T 1ijq_A 157 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE--DKVFWTDI--INEAIF 232 (316)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET--TEEEEEET--TTTEEE
T ss_pred EEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEEC--CEEEEEEC--CCCeEE
Confidence 22 22345678999998766665554 56789999987542222111 1234566777753 34566665 588999
Q ss_pred EEEccCCCc
Q psy6213 255 VWDIRRPYI 263 (330)
Q Consensus 255 i~d~~~~~~ 263 (330)
.++..+++.
T Consensus 233 ~~~~~~g~~ 241 (316)
T 1ijq_A 233 SANRLTGSD 241 (316)
T ss_dssp EEETTTCCC
T ss_pred EEeCCCCcc
Confidence 999876654
No 257
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.07 E-value=2.1e-07 Score=75.34 Aligned_cols=223 Identities=10% Similarity=0.066 Sum_probs=132.1
Q ss_pred cceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCC--cEEEEEC
Q psy6213 6 PVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNG--AVVVWNL 81 (330)
Q Consensus 6 ~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg--~i~iw~~ 81 (330)
....++|+++|+++++. ++.|..||.+.. ....... ...+..+++.+ +++++++..... .|..++.
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~~--------~~~p~gia~~~-dG~l~vad~~~~~~~v~~~d~ 102 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHATV--------EGKVSGLAFTS-NGDLVATGWNADSIPVVSLVK 102 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEEC--------SSEEEEEEECT-TSCEEEEEECTTSCEEEEEEC
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEeC--------CCCceeEEEcC-CCcEEEEeccCCcceEEEEcC
Confidence 45678999999984444 889999987753 3222221 12358899999 777665553322 3666665
Q ss_pred CCCCCCceeEEec-ccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCce-eeee-------e--cCCCCeEEEEEcC
Q psy6213 82 GQISRSKQERVFN-DHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQES-TKIF-------H--SNTESVRDVEFNP 150 (330)
Q Consensus 82 ~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~-------~--~~~~~v~~~~~~~ 150 (330)
.+ ++...... ........++..+ ++..+++-..++.|+.+|..+++. +... . ..-.....+ +|
T Consensus 103 ~~---g~~~~~~~~~~~~~~~g~~~~~-~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~ 176 (306)
T 2p4o_A 103 SD---GTVETLLTLPDAIFLNGITPLS-DTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KR 176 (306)
T ss_dssp TT---SCEEEEEECTTCSCEEEEEESS-SSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EE
T ss_pred CC---CeEEEEEeCCCccccCcccccC-CCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--Cc
Confidence 55 23222111 1112234444443 444444444578888888765421 1100 0 111234455 78
Q ss_pred CCCcEEEEEecCCcEEEEecCCCccc--eeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccc-cceec-cc
Q psy6213 151 HSPYAFASVSENGTIQQWDVRRPEKC--FYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSL-EYSIN-TI 226 (330)
Q Consensus 151 ~~~~~~~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-~~~~~-~~ 226 (330)
++++++++-...+.|..+|+...+.. ...+. .......++++++|+++++....+.|.++|.. ++.. ..... ..
T Consensus 177 dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~ 254 (306)
T 2p4o_A 177 FGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGV 254 (306)
T ss_dssp ETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTC
T ss_pred CCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeeccccc
Confidence 88877777777889999998742211 11121 11346778999999887777778899999976 3221 11112 23
Q ss_pred cceEEEEEc---CCCCeEEEEee
Q psy6213 227 ASVSRIKWR---PQRKFHLASCS 246 (330)
Q Consensus 227 ~~v~~~~~~---~~~~~l~~~~~ 246 (330)
...++++|. |++..|+++..
T Consensus 255 ~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 255 IGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp TTEEEEEECCSTTTTTEEEEEEC
T ss_pred CCceEEEEecccCCCCEEEEECC
Confidence 568999998 89887777765
No 258
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=99.06 E-value=5e-08 Score=87.54 Aligned_cols=275 Identities=12% Similarity=0.074 Sum_probs=161.8
Q ss_pred CCCeeecC-CCeEEEEEcCCcceeeeeceeecccccccc---c-eeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCce
Q psy6213 15 DNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNF---S-CNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQ 89 (330)
Q Consensus 15 ~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~---~-v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~ 89 (330)
++..++++ ++.|.-+|..+|+.+-.+............ . ...++. .+..+++++.|+.|..+|..+ ++.
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~v~~~dg~l~alD~~t---G~~ 139 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL---WGDKVYVGTLDGRLIALDAKT---GKA 139 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE---EBTEEEEECTTSEEEEEETTT---CCE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE---ECCEEEEEcCCCEEEEEECCC---CCE
Confidence 44444444 889999999998877665543221110000 0 011222 356778888899999999988 555
Q ss_pred eEEecccc----cceeE-EEEEecCCCEEEEEec------CCcEEEEEeecCceeeeeecCC------------------
Q psy6213 90 ERVFNDHK----RTVNK-VSFHYVESNWLISGSQ------DGTMRLFDIRCQESTKIFHSNT------------------ 140 (330)
Q Consensus 90 ~~~~~~~~----~~i~~-i~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~------------------ 140 (330)
+-.+.... ..+.+ ..+. ++ .++++.. +|.|+.+|.++++.+-.+....
T Consensus 140 ~W~~~~~~~~~~~~~~~~P~v~--~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~ 216 (668)
T 1kv9_A 140 IWSQQTTDPAKPYSITGAPRVV--KG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKT 216 (668)
T ss_dssp EEEEECSCTTSSCBCCSCCEEE--TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTT
T ss_pred eeeeccCCCCCcceecCCCEEE--CC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCcccccccccccccc
Confidence 54443211 11111 1111 33 4555433 5899999999999887765311
Q ss_pred -------------CCeEEEEEcCCCCcEEEEEecCC-------------------cEEEEecCCCccceeeecc--CC--
Q psy6213 141 -------------ESVRDVEFNPHSPYAFASVSENG-------------------TIQQWDVRRPEKCFYQFTA--HS-- 184 (330)
Q Consensus 141 -------------~~v~~~~~~~~~~~~~~~~~~dg-------------------~i~i~d~~~~~~~~~~~~~--~~-- 184 (330)
.....+++.|+.. +++.+..++ .|..+|.+++ +.+-.++. |.
T Consensus 217 ~~g~~~w~~~~gg~~w~~~a~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG-~~~W~~~~~~~~~w 294 (668)
T 1kv9_A 217 WQGDQYWKLGGGGTVWDSMAYDPELD-LLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTG-KLAWHYQVTPGDSW 294 (668)
T ss_dssp CCSSCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTC-CEEEEEESSTTCCS
T ss_pred CCccceeeeCCCCccccceEEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCC-ceeeEeecCCCccc
Confidence 0112467888777 577777665 3999999984 44433332 22
Q ss_pred -----CCeEEEEEcCCCC---EEEEEecCCcEEEEeCCCCccccceec------------cccce---------------
Q psy6213 185 -----GPIFACDWHPEHA---WLATASRDKTIKVWDLSIKPSLEYSIN------------TIASV--------------- 229 (330)
Q Consensus 185 -----~~i~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~------------~~~~v--------------- 229 (330)
.+.....+..+|+ .++.++.+|.++++|..+++.+..... ...++
T Consensus 295 d~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~ 374 (668)
T 1kv9_A 295 DFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMW 374 (668)
T ss_dssp CCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEES
T ss_pred cccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEEC
Confidence 2233233333665 688999999999999998865411100 00000
Q ss_pred ---------EEEEEcCCCCeEEEEee---------------------------------cccCCeEEEEEccCCCccceE
Q psy6213 230 ---------SRIKWRPQRKFHLASCS---------------------------------LVVDSSVNVWDIRRPYIPLAS 267 (330)
Q Consensus 230 ---------~~~~~~~~~~~l~~~~~---------------------------------~~~~~~i~i~d~~~~~~~~~~ 267 (330)
..++++|+...+++... ...+|.|..||+.+++. +-.
T Consensus 375 p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~-~W~ 453 (668)
T 1kv9_A 375 PSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKA-AWK 453 (668)
T ss_dssp SCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEE-EEE
T ss_pred CCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcE-EEE
Confidence 12677777665444211 00248899999999875 333
Q ss_pred eecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 268 FTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 268 ~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
... ..+.....+...+.+++.++.||.++.|+..
T Consensus 454 ~~~-~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~ 487 (668)
T 1kv9_A 454 VPY-PTHWNGGTLSTAGNLVFQGTAAGQMHAYSAD 487 (668)
T ss_dssp EEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred ccC-CCCCcCceeEeCCCEEEEECCcccchhhhhh
Confidence 332 2334444455578889999999999999753
No 259
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.06 E-value=9.6e-08 Score=77.92 Aligned_cols=242 Identities=10% Similarity=0.038 Sum_probs=138.6
Q ss_pred ceEEEEeeCCCe-eecC-CCeEEEEEcCCcceeeeeceeec-------------cccccccceeeeeecccCCcEEEEEc
Q psy6213 7 VHKHGLKADNGL-AQPS-RNVFKIFLIKDTEFVETHNLRVG-------------KNINLNFSCNDVAWSCIEENHIATGA 71 (330)
Q Consensus 7 v~~~~~s~~~~~-~~~g-d~~i~iw~~~~~~~~~~~~~~~~-------------~~~~~~~~v~~~~~~~~~~~~l~~~~ 71 (330)
..++++.++|++ .+.. ++.|..|+..+++... +..... ........+..+++.+ ++..|+++.
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~-~~g~l~v~d 98 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNL-QNNQLYIVD 98 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEET-TTTEEEEEE
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcC-CCCcEEEEE
Confidence 467889999985 4444 8999999887655432 111000 0001112357888886 444555555
Q ss_pred CCCcEEEEECCCCCCCceeEEecc-----cccceeEEEEEecCCCEEEEEec-----------------CCcEEEEEeec
Q psy6213 72 TNGAVVVWNLGQISRSKQERVFND-----HKRTVNKVSFHYVESNWLISGSQ-----------------DGTMRLFDIRC 129 (330)
Q Consensus 72 ~dg~i~iw~~~~~~~~~~~~~~~~-----~~~~i~~i~~~~~~~~~l~~~~~-----------------d~~i~i~d~~~ 129 (330)
..+.+..+|..+ .. ...+.. .......+++.+.++++.++-.. ++.|..+|..+
T Consensus 99 ~~~~i~~~d~~~---g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 99 CYYHLSVVGSEG---GH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp TTTEEEEECTTC---EE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred CCCCEEEEeCCC---CE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 455588888664 21 122211 11346778888524565555432 36788888766
Q ss_pred CceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCcc-ceeeeccCCCCeEEEEEcCCCCEEEEEec----
Q psy6213 130 QESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEK-CFYQFTAHSGPIFACDWHPEHAWLATASR---- 204 (330)
Q Consensus 130 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---- 204 (330)
++...... .......++++|+++.++++-...+.|..|++..... ....+....+ ...+++.++|++.++...
T Consensus 175 ~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~ 252 (322)
T 2fp8_A 175 KETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDG 252 (322)
T ss_dssp TEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTS
T ss_pred CEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccc
Confidence 65432222 2234567999999986555656678999999874211 1112211223 788999999987666544
Q ss_pred ------CCcEEEEeCCCCccccceecc----ccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCC
Q psy6213 205 ------DKTIKVWDLSIKPSLEYSINT----IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRP 261 (330)
Q Consensus 205 ------dg~i~i~d~~~~~~~~~~~~~----~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~ 261 (330)
.+.|..+|.. ++........ ...++.+++ .++. |+++.. .++.|..+++...
T Consensus 253 ~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~-L~v~~~--~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 253 NMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGL-LYIGTL--FHGSVGILVYDKK 314 (322)
T ss_dssp STTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTE-EEEECS--SCSEEEEEEC---
T ss_pred cccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCE-EEEeec--CCCceEEEecccc
Confidence 4668888865 3232222211 234666666 3454 555554 4888999987644
No 260
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.06 E-value=3.7e-07 Score=73.81 Aligned_cols=227 Identities=9% Similarity=0.041 Sum_probs=134.7
Q ss_pred eeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCC--cEEEEEeecCc
Q psy6213 54 CNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDG--TMRLFDIRCQE 131 (330)
Q Consensus 54 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~--~i~i~d~~~~~ 131 (330)
...++|++ +++++++-..++.|..||... .....+. .......+++.+ +++++++..... .|..+|..+++
T Consensus 34 pegia~~~-~g~lyv~d~~~~~I~~~d~~g----~~~~~~~-~~~~p~gia~~~-dG~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 34 LENLASAP-DGTIFVTNHEVGEIVSITPDG----NQQIHAT-VEGKVSGLAFTS-NGDLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp EEEEEECT-TSCEEEEETTTTEEEEECTTC----CEEEEEE-CSSEEEEEEECT-TSCEEEEEECTTSCEEEEEECTTSC
T ss_pred cceEEECC-CCCEEEEeCCCCeEEEECCCC----ceEEEEe-CCCCceeEEEcC-CCcEEEEeccCCcceEEEEcCCCCe
Confidence 47899999 888777776788999998764 2222222 235688999997 777665554322 46667766666
Q ss_pred eeeeeec-CCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCcccee---------eeccCCCCeEEEEEcCCCCEEEE
Q psy6213 132 STKIFHS-NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFY---------QFTAHSGPIFACDWHPEHAWLAT 201 (330)
Q Consensus 132 ~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~---------~~~~~~~~i~~~~~~~~~~~l~~ 201 (330)
....... .......++..+++. ++++-..++.|+.+|.......+. .........+.+ +|+++.|+.
T Consensus 107 ~~~~~~~~~~~~~~g~~~~~~~~-~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv 183 (306)
T 2p4o_A 107 VETLLTLPDAIFLNGITPLSDTQ-YLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYV 183 (306)
T ss_dssp EEEEEECTTCSCEEEEEESSSSE-EEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEE
T ss_pred EEEEEeCCCccccCcccccCCCc-EEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEE
Confidence 5433221 122334555555443 455544688899999764211111 000111234555 778775554
Q ss_pred E-ecCCcEEEEeCCC-Ccc-ccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCcc-ceEeecCCCCeEE
Q psy6213 202 A-SRDKTIKVWDLSI-KPS-LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIP-LASFTEHKDVVSG 277 (330)
Q Consensus 202 ~-~~dg~i~i~d~~~-~~~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~-~~~~~~~~~~v~~ 277 (330)
+ ...+.|..||+.. +.. .............++++++|.. +++.. ..+.|.++|.. ++.. +..........++
T Consensus 184 ~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l-~va~~--~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~ 259 (306)
T 2p4o_A 184 SNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNL-YGATH--IYNSVVRIAPD-RSTTIIAQAEQGVIGSTA 259 (306)
T ss_dssp EETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCE-EEECB--TTCCEEEECTT-CCEEEEECGGGTCTTEEE
T ss_pred EeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCE-EEEeC--CCCeEEEECCC-CCEEEEeecccccCCceE
Confidence 4 5678899999875 211 1111111234667899999975 55544 47899999975 4321 1122222356899
Q ss_pred EEEe---cCCCEEEEeecCC
Q psy6213 278 LAWR---GDPQLFIASSRVS 294 (330)
Q Consensus 278 ~~~~---~~~~~l~s~~~dg 294 (330)
++|. |+++.|+.++..+
T Consensus 260 ~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 260 VAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp EEECCSTTTTTEEEEEECTT
T ss_pred EEEecccCCCCEEEEECCCC
Confidence 9998 8887777766543
No 261
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.05 E-value=7.1e-08 Score=74.49 Aligned_cols=177 Identities=6% Similarity=-0.028 Sum_probs=121.0
Q ss_pred eeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeE--EEEEecCCCEEEEEecCCcEEEEEeecCce
Q psy6213 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNK--VSFHYVESNWLISGSQDGTMRLFDIRCQES 132 (330)
Q Consensus 55 ~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~--i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (330)
..+.|+ ++.++.+.+.+|.|+.+|+++ ++....+ -...... +++. ++.+.+..-.++.+.+||.++.+.
T Consensus 58 qGL~~~--~~~Ly~stG~~g~v~~iD~~T---gkv~~~~--l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~ 128 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGHQGTLRQLSLES---AQPVWME--RLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQR 128 (268)
T ss_dssp EEEEEE--TTEEEEEETTTTEEEECCSSC---SSCSEEE--ECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEE
T ss_pred ceEEEE--CCEEEEEcCCCCEEEEEECCC---CcEEeEE--CCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcE
Confidence 577776 467778888889999999998 4444444 2233333 4443 566666667789999999999999
Q ss_pred eeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeecc--CC---CCeEEEEEcCCCCEEEEEecCCc
Q psy6213 133 TKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA--HS---GPIFACDWHPEHAWLATASRDKT 207 (330)
Q Consensus 133 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~--~~---~~i~~~~~~~~~~~l~~~~~dg~ 207 (330)
+.++...... ..++ ++++. |+.+..++.|.++|..+ .+....+.. +. ..++.+.|. +|+..+..-.+..
T Consensus 129 ~~ti~~~~eG-wGLt--~Dg~~-L~vSdGs~~l~~iDp~T-~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~ 202 (268)
T 3nok_A 129 ERTTRYSGEG-WGLC--YWNGK-LVRSDGGTMLTFHEPDG-FALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSD 202 (268)
T ss_dssp EEEEECSSCC-CCEE--EETTE-EEEECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSE
T ss_pred EEEEeCCCce-eEEe--cCCCE-EEEECCCCEEEEEcCCC-CeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCe
Confidence 9988753322 2333 56775 55555688999999988 455554443 21 245677877 7766655556889
Q ss_pred EEEEeCCCCcccccee-------------ccccceEEEEEcCCCCeEEEEee
Q psy6213 208 IKVWDLSIKPSLEYSI-------------NTIASVSRIKWRPQRKFHLASCS 246 (330)
Q Consensus 208 i~i~d~~~~~~~~~~~-------------~~~~~v~~~~~~~~~~~l~~~~~ 246 (330)
|.+.|.++++...... ....-.+.++++|+++.+++++.
T Consensus 203 I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 203 VLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 9999999985422211 12246789999999888888874
No 262
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.01 E-value=2.6e-06 Score=71.48 Aligned_cols=225 Identities=12% Similarity=-0.005 Sum_probs=141.9
Q ss_pred EEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecC----ceeeeeecCCC
Q psy6213 66 HIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQ----ESTKIFHSNTE 141 (330)
Q Consensus 66 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~ 141 (330)
+|+.+. ...|+..++.. ...... ......+..++|++.++.++++-...+.|+.+++... .....+.....
T Consensus 85 ~ll~~~-~~~I~~i~l~~---~~~~~~-~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~ 159 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDR---SEYTSL-IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 159 (400)
T ss_dssp EEEEEE-TTEEEEECTTS---CSCEEE-ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCS
T ss_pred eeEEec-cceeEEEccCC---cceeEe-ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCC
Confidence 444443 46788888876 222222 2344678899999845555555556788999988752 22333333445
Q ss_pred CeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEe-c-CCcEEEEeCCCCccc
Q psy6213 142 SVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS-R-DKTIKVWDLSIKPSL 219 (330)
Q Consensus 142 ~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~-dg~i~i~d~~~~~~~ 219 (330)
....+++.+.+..++++-...+.|.+.++.. ......+.........++++|.+..|+... . .+.|...++......
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g-~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~ 238 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKG-VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 238 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTT-CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCE
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCC-CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccE
Confidence 6788999986665777777788999999875 322233333445678999999666555554 2 378999988765333
Q ss_pred cceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeec--CCCCeEEEEEecCCCEEEEeecCCeEe
Q psy6213 220 EYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTE--HKDVVSGLAWRGDPQLFIASSRVSIIP 297 (330)
Q Consensus 220 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~dg~i~ 297 (330)
............+++++++..|+.+-. ..+.|..+|+..... ...... .-....+++.. .+.++.+-...+.|.
T Consensus 239 ~~~~~~l~~P~glavd~~~~~lY~aD~--~~~~I~~~d~dG~~~-~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~ 314 (400)
T 3p5b_L 239 SLVTENIQWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIF 314 (400)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCCC-EEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEE
T ss_pred EEEECCCCceEEEEEEeCCCEEEEEEC--CCCEEEEEeCCCCcc-EEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEE
Confidence 222233467899999998888777776 688999999875543 222222 22345677773 344555555566676
Q ss_pred eee
Q psy6213 298 RAK 300 (330)
Q Consensus 298 iw~ 300 (330)
.++
T Consensus 315 ~~~ 317 (400)
T 3p5b_L 315 SAN 317 (400)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 263
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.01 E-value=4.3e-06 Score=76.75 Aligned_cols=280 Identities=10% Similarity=0.038 Sum_probs=165.4
Q ss_pred ccceEEEEeeCCCeeecCCCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCC
Q psy6213 5 SPVHKHGLKADNGLAQPSRNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQI 84 (330)
Q Consensus 5 ~~v~~~~~s~~~~~~~~gd~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 84 (330)
..|.++...++|.+.++..+.+.+||..++++.................|.++...+ ++. |..|+..+-|.+++..+.
T Consensus 211 ~~i~~i~~d~~g~lwigt~~Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~-~g~-lWigt~~~Gl~~~~~~~~ 288 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGTSKGLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLK-DNK-LWIATELNGIMILDLQQN 288 (781)
T ss_dssp SSEEEEEECTTCCEEEEETTEEEEEETTTTEEEC-----------CCCCEEEEEECT-TSE-EEEEESSSCEEEEETTCC
T ss_pred CceeEEEEcCCCCEEEEeCCcHheECCCCCcEEEEEcCCCccccccCceEEEEEECC-CCC-EEEEeCCCCeEEECCCCC
Confidence 458888888888884444337889998776654322111000011123367777765 444 555666456888887652
Q ss_pred CCCceeEE------------ecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeee---------cCCCCe
Q psy6213 85 SRSKQERV------------FNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFH---------SNTESV 143 (330)
Q Consensus 85 ~~~~~~~~------------~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---------~~~~~v 143 (330)
.. ..... .......|.++...+ ++ .|-.|+.++-|..++..+........ .....|
T Consensus 289 ~~-~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~-~g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v 365 (781)
T 3v9f_A 289 QF-LLPEQIRFEFIREGDNNYSLSNASARYIFQDS-FN-NIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVV 365 (781)
T ss_dssp ----------CEEECBCSSTTSBSSSCEEEEEECS-SC-CEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCE
T ss_pred ee-eeeeccccccccCCCCCCCCCCCeEEEEEEeC-CC-CEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcce
Confidence 11 11110 011235688888765 44 46667767779999876544322110 123568
Q ss_pred EEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeee----ccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccc
Q psy6213 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQF----TAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSL 219 (330)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~----~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 219 (330)
.++...+++. +..|+.++-|..||..+. . ...+ ......|.++...+++.+ ..|+.++-+..+|..+++..
T Consensus 366 ~~i~~d~~g~--lWigt~~~Gl~~~~~~~~-~-~~~~~~~~~~~~~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~ 440 (781)
T 3v9f_A 366 SSVCDDGQGK--LWIGTDGGGINVFENGKR-V-AIYNKENRELLSNSVLCSLKDSEGNL-WFGTYLGNISYYNTRLKKFQ 440 (781)
T ss_dssp EEEEECTTSC--EEEEEBSSCEEEEETTEE-E-EECC-----CCCSBEEEEEECTTSCE-EEEETTEEEEEECSSSCEEE
T ss_pred EEEEEcCCCC--EEEEeCCCcEEEEECCCC-e-EEEccCCCCCCCcceEEEEECCCCCE-EEEeccCCEEEEcCCCCcEE
Confidence 9999888876 667776777999997652 2 1111 123457889988877764 45776667899998766332
Q ss_pred ccee--ccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecC-----CCCeEEEEEecCCCEEEEeec
Q psy6213 220 EYSI--NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEH-----KDVVSGLAWRGDPQLFIASSR 292 (330)
Q Consensus 220 ~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~s~~~ 292 (330)
.... .....|.++...+++.. .++. .+.|..||..+++. ....... ...|.++...++|.+.+....
T Consensus 441 ~~~~~~~~~~~v~~i~~d~~g~l-wigt----~~Gl~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~ 514 (781)
T 3v9f_A 441 IIELEKNELLDVRVFYEDKNKKI-WIGT----HAGVFVIDLASKKV-IHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFG 514 (781)
T ss_dssp ECCSTTTCCCCEEEEEECTTSEE-EEEE----TTEEEEEESSSSSC-CEEECTTTSSCSCSCEEEEEECTTCCEEEEESS
T ss_pred EeccCCCCCCeEEEEEECCCCCE-EEEE----CCceEEEeCCCCeE-EecccCcccccccceeEEEEEcCCCCEEEEEcC
Confidence 2211 13467899999988874 4433 36789999877653 2221111 357899999988886654433
Q ss_pred CCeEeeeec
Q psy6213 293 VSIIPRAKN 301 (330)
Q Consensus 293 dg~i~iw~~ 301 (330)
+| |..++.
T Consensus 515 ~G-l~~~~~ 522 (781)
T 3v9f_A 515 GG-VGIYTP 522 (781)
T ss_dssp SC-EEEECT
T ss_pred CC-EEEEeC
Confidence 45 555653
No 264
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.00 E-value=1.8e-06 Score=70.06 Aligned_cols=228 Identities=9% Similarity=-0.034 Sum_probs=142.8
Q ss_pred EEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCcee-eeeecCCCCeE
Q psy6213 66 HIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQEST-KIFHSNTESVR 144 (330)
Q Consensus 66 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~v~ 144 (330)
+|+.+. ...|+..+++... ......+. .......+.|.+.++.++.+-...+.|..+++..+... ..+...-....
T Consensus 6 ~ll~~~-~~~I~~i~l~~~~-~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~ 82 (318)
T 3sov_A 6 LLLYAN-RRDLRLVDATNGK-ENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD 82 (318)
T ss_dssp EEEEEC-EEEEEEEETTCTT-SCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCC
T ss_pred EEEEEc-cCeEEEEECCCCc-eEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCcc
Confidence 344443 4578999987632 11112222 23456789999855666666667788999998765322 22222334567
Q ss_pred EEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEe--cCCcEEEEeCCCCccccce
Q psy6213 145 DVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS--RDKTIKVWDLSIKPSLEYS 222 (330)
Q Consensus 145 ~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~ 222 (330)
.+++.+.+..++++-...+.|.++++... ...............+++.|.+..|+.+. ..+.|...++.........
T Consensus 83 glavd~~~g~ly~~d~~~~~I~~~~~dG~-~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~ 161 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSETNRIEVSNLDGS-LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII 161 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred EEEEEcCCCeEEEEECCCCEEEEEECCCC-cEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEE
Confidence 89999876656777667789999998752 22222223445678999998765555554 3578888887654222222
Q ss_pred eccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeec
Q psy6213 223 INTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKN 301 (330)
Q Consensus 223 ~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~ 301 (330)
.........++++|++..|+.+-. ..+.|..+|+..... ............++++.. +.++.+-...+.|..++.
T Consensus 162 ~~~l~~Pnglavd~~~~~lY~aD~--~~~~I~~~d~dG~~~-~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 162 NSEIYWPNGLTLDYEEQKLYWADA--KLNFIHKSNLDGTNR-QAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNK 236 (318)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSC-EEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred ECCCCCccEEEEeccCCEEEEEEC--CCCEEEEEcCCCCce-EEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEEC
Confidence 223456789999998887787776 689999999875432 222232344567788753 344555555667777654
No 265
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.00 E-value=2.2e-06 Score=78.65 Aligned_cols=276 Identities=13% Similarity=0.082 Sum_probs=165.7
Q ss_pred ccceEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeec-------eeeccccccccceeeeeecccCCcEEEEEcCCCcE
Q psy6213 5 SPVHKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHN-------LRVGKNINLNFSCNDVAWSCIEENHIATGATNGAV 76 (330)
Q Consensus 5 ~~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i 76 (330)
..|.++...++|.+.++. .+-|.+++..++.+..... .......-....|.++...+ ++. |-.|+.++-|
T Consensus 258 ~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~-~g~-lWigt~~~Gl 335 (781)
T 3v9f_A 258 SYIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS-FNN-IWIGTWGGGI 335 (781)
T ss_dssp CCEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECS-SCC-EEEEEBSSCE
T ss_pred ceEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC-CCC-EEEEecCCeE
Confidence 468888888888884444 4678889988765432211 00000011123467787776 554 5567766778
Q ss_pred EEEECCCCCCCceeEEec----------ccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeee---ecCCCCe
Q psy6213 77 VVWNLGQISRSKQERVFN----------DHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIF---HSNTESV 143 (330)
Q Consensus 77 ~iw~~~~~~~~~~~~~~~----------~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~---~~~~~~v 143 (330)
..++... ... ..+. .....|.++...+ ++ .|..|+.++-|..||..+++..... ......|
T Consensus 336 ~~~~~~~---~~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~-~g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v 409 (781)
T 3v9f_A 336 NFISNAP---PTF-HTWSYSPTQMNESSLSNKVVSSVCDDG-QG-KLWIGTDGGGINVFENGKRVAIYNKENRELLSNSV 409 (781)
T ss_dssp EEECSSC---CSC-EEEC----CCCSSCCSSSCEEEEEECT-TS-CEEEEEBSSCEEEEETTEEEEECC-----CCCSBE
T ss_pred EEeCCCC---Ccc-eeeccCccccccCCCCCcceEEEEEcC-CC-CEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcce
Confidence 8888765 221 1111 1235688887764 44 4666776667999987654332211 1234578
Q ss_pred EEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeec---cCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcccc
Q psy6213 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFT---AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE 220 (330)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 220 (330)
.++...+++. +..|+.++-+..+|.++. + ...+. .....|.++...+++. |..|+. +-+..||..+.+...
T Consensus 410 ~~i~~d~~g~--lWigt~~~Gl~~~~~~~~-~-~~~~~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~ 483 (781)
T 3v9f_A 410 LCSLKDSEGN--LWFGTYLGNISYYNTRLK-K-FQIIELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIH 483 (781)
T ss_dssp EEEEECTTSC--EEEEETTEEEEEECSSSC-E-EEECCSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCE
T ss_pred EEEEECCCCC--EEEEeccCCEEEEcCCCC-c-EEEeccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEe
Confidence 8998888876 556777677999998752 2 22222 2346788998888776 444555 558899987763322
Q ss_pred ceecc-----ccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeec----CCCCeEEEEEecCCCEEEEee
Q psy6213 221 YSINT-----IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTE----HKDVVSGLAWRGDPQLFIASS 291 (330)
Q Consensus 221 ~~~~~-----~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~l~s~~ 291 (330)
..... ...+.++...++|.. .++.. ++.|..||..+.+ ...+.. ....|.++...++|.+.++ +
T Consensus 484 ~~~~~~~~~~~~~i~~i~~d~~g~l-Wigt~---~~Gl~~~~~~~~~--~~~~~~~~~l~~~~i~~i~~d~~g~lWi~-T 556 (781)
T 3v9f_A 484 HYDTSNSQLLENFVRSIAQDSEGRF-WIGTF---GGGVGIYTPDMQL--VRKFNQYEGFCSNTINQIYRSSKGQMWLA-T 556 (781)
T ss_dssp EECTTTSSCSCSCEEEEEECTTCCE-EEEES---SSCEEEECTTCCE--EEEECTTTTCSCSCEEEEEECTTSCEEEE-E
T ss_pred cccCcccccccceeEEEEEcCCCCE-EEEEc---CCCEEEEeCCCCe--EEEccCCCCCCCCeeEEEEECCCCCEEEE-E
Confidence 21111 357899999999985 44432 4457778876653 222321 2356899999888886654 4
Q ss_pred cCCeEeeeec
Q psy6213 292 RVSIIPRAKN 301 (330)
Q Consensus 292 ~dg~i~iw~~ 301 (330)
.+|.+..|+.
T Consensus 557 ~~Glv~~~d~ 566 (781)
T 3v9f_A 557 GEGLVCFPSA 566 (781)
T ss_dssp TTEEEEESCT
T ss_pred CCCceEEECC
Confidence 4776477764
No 266
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.00 E-value=7.6e-07 Score=69.13 Aligned_cols=203 Identities=8% Similarity=0.075 Sum_probs=135.7
Q ss_pred EecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeec-CCCCeEEEEEcCCCCcEEEEEecCCcEEEEec
Q psy6213 92 VFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHS-NTESVRDVEFNPHSPYAFASVSENGTIQQWDV 170 (330)
Q Consensus 92 ~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~ 170 (330)
.+.+-...+..++|.|+++.++++...++.|...|.. ++.++.+.. .......+++.+++. ++++.-.++.+.++++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~-~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQ-FVISDERDYAIYVISL 98 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTE-EEEEETTTTEEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCE-EEEEECCCCcEEEEEc
Confidence 4555667899999999555566667888899999987 777777642 235678899988886 4555556778999987
Q ss_pred CCCcc--ceeeec------cCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCC---ccccce-------eccccceEEE
Q psy6213 171 RRPEK--CFYQFT------AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIK---PSLEYS-------INTIASVSRI 232 (330)
Q Consensus 171 ~~~~~--~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~---~~~~~~-------~~~~~~v~~~ 232 (330)
..... ...... ..+...-.++|+|.++.|+++.......+|.+... ...... ......+..+
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 75442 111111 23445689999999887777776666666665421 011111 0123457899
Q ss_pred EEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCC---------CCeEEEEEecCCCEEEEeecCCeEeeeec
Q psy6213 233 KWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHK---------DVVSGLAWRGDPQLFIASSRVSIIPRAKN 301 (330)
Q Consensus 233 ~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~---------~~v~~~~~~~~~~~l~s~~~dg~i~iw~~ 301 (330)
+++|....+++... ....|..+|..... +..+.-.. ....+|+|.++|++. ..++-..+++++.
T Consensus 179 ~~dp~tg~lliLS~--~s~~L~~~d~~g~~--~~~~~L~~g~~~l~~~~~qpEGia~d~~G~ly-IvsE~n~~y~f~~ 251 (255)
T 3qqz_A 179 EFNQQKNTLLVLSH--ESRALQEVTLVGEV--IGEMSLTKGSRGLSHNIKQAEGVAMDASGNIY-IVSEPNRFYRFTP 251 (255)
T ss_dssp EEETTTTEEEEEET--TTTEEEEECTTCCE--EEEEECSTTGGGCSSCCCSEEEEEECTTCCEE-EEETTTEEEEEEC
T ss_pred EEcCCCCeEEEEEC--CCCeEEEEcCCCCE--EEEEEcCCccCCcccccCCCCeeEECCCCCEE-EEcCCceEEEEEe
Confidence 99998877777777 68999999977542 33332221 257899999999844 4577777777654
No 267
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.97 E-value=9.6e-06 Score=68.06 Aligned_cols=244 Identities=9% Similarity=0.028 Sum_probs=146.1
Q ss_pred CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCC-CceeEEeccccccee
Q psy6213 23 RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISR-SKQERVFNDHKRTVN 101 (330)
Q Consensus 23 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~~~~i~ 101 (330)
...|+..+++......... ....+..++|.+.++.++.+-...+.|..+++..... ......+........
T Consensus 91 ~~~I~~i~l~~~~~~~~~~--------~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIP--------NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp TTEEEEECTTSCSCEEEEC--------SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred cceeEEEccCCcceeEecc--------ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 6677777777654333221 1122488999984444555555678888888864210 112222332345677
Q ss_pred EEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEec-CCcEEEEecCCCccceeee
Q psy6213 102 KVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSE-NGTIQQWDVRRPEKCFYQF 180 (330)
Q Consensus 102 ~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-dg~i~i~d~~~~~~~~~~~ 180 (330)
.+++.+.+++++++-...+.|.+.+++.......+.........+++.|.+.+++.+-.. .+.|...++.. .......
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG-~~~~~~~ 241 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLV 241 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS-CSCEEEE
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC-CccEEEE
Confidence 888886456666666677899999987554444444344568899999987755555433 47888888874 2222222
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEe-cCCcEEEEeCCCCccccceec--cccceEEEEEcCCCCeEEEEeecccCCeEEEEE
Q psy6213 181 TAHSGPIFACDWHPEHAWLATAS-RDKTIKVWDLSIKPSLEYSIN--TIASVSRIKWRPQRKFHLASCSLVVDSSVNVWD 257 (330)
Q Consensus 181 ~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d 257 (330)
...-...+.|++++++..|+.+. ..+.|..+|+........... .......+++. +..++.+.. ..+.|..+|
T Consensus 242 ~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~--~~~lywtd~--~~~~V~~~~ 317 (400)
T 3p5b_L 242 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDI--INEAIFSAN 317 (400)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE--TTEEEEEES--SSCSEEEEE
T ss_pred ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe--CCEEEEecC--CCCeEEEEE
Confidence 33335678999998776666554 567899999876533222211 22345567763 334566665 578899999
Q ss_pred ccCCCccceEeecCCCCeEEEEE
Q psy6213 258 IRRPYIPLASFTEHKDVVSGLAW 280 (330)
Q Consensus 258 ~~~~~~~~~~~~~~~~~v~~~~~ 280 (330)
..+++. ...+........+++.
T Consensus 318 ~~~G~~-~~~i~~~~~~p~~i~v 339 (400)
T 3p5b_L 318 RLTGSD-VNLLAENLLSPEDMVL 339 (400)
T ss_dssp SSSCCC-CEEEECSCSCEEEEEE
T ss_pred cCCCCc-eEEEecCCCCCceEEE
Confidence 766654 4444433334555543
No 268
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.97 E-value=6.4e-07 Score=78.79 Aligned_cols=258 Identities=11% Similarity=0.056 Sum_probs=144.3
Q ss_pred CCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceee-eeecccCCcEEEEEcC------CCcEEEEECCCCCC
Q psy6213 15 DNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCND-VAWSCIEENHIATGAT------NGAVVVWNLGQISR 86 (330)
Q Consensus 15 ~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~~~~------dg~i~iw~~~~~~~ 86 (330)
+++.++.. |+.+..+|..+++..-......... ...+.+ ... .+..+++++. +|.|..+|..+
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~---~~~~~~~P~v---~~g~v~vg~~~~~~~~~g~v~a~D~~t--- 185 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKV---GSTLTQAPFV---AKDTVLMGCSGAELGVRGAVNAFDLKT--- 185 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGG---TCBCCSCCEE---ETTEEEEECBCGGGTCCCEEEEEETTT---
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCc---cceeccCCEE---ECCEEEEEecCCccCCCCEEEEEECCC---
Confidence 44445555 9999999999998776554332110 001111 111 2345555554 78999999987
Q ss_pred CceeEEecccccc--------------------------------------eeEEEEEecCCCEEEEEecC---------
Q psy6213 87 SKQERVFNDHKRT--------------------------------------VNKVSFHYVESNWLISGSQD--------- 119 (330)
Q Consensus 87 ~~~~~~~~~~~~~--------------------------------------i~~i~~~~~~~~~l~~~~~d--------- 119 (330)
++.+-.+...... -..+++.+ +...++.+..+
T Consensus 186 G~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~-~~g~vy~~~g~~~~~~~~~~ 264 (571)
T 2ad6_A 186 GELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDP-KLNLFYYGSGNPAPWNETMR 264 (571)
T ss_dssp CCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEET-TTTEEEEECCCCSCSCGGGS
T ss_pred CcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcC-CCCeEEEECCCCccccCCcc
Confidence 4444333211100 02356666 45566655532
Q ss_pred -------CcEEEEEeecCceeeeeecCC----------CCeEEEEEcCCCC--cEEEEEecCCcEEEEecCCCccceeee
Q psy6213 120 -------GTMRLFDIRCQESTKIFHSNT----------ESVRDVEFNPHSP--YAFASVSENGTIQQWDVRRPEKCFYQF 180 (330)
Q Consensus 120 -------~~i~i~d~~~~~~~~~~~~~~----------~~v~~~~~~~~~~--~~~~~~~~dg~i~i~d~~~~~~~~~~~ 180 (330)
+.|..+|.++++.+-.++... .++. +...++++ .+++.++.+|.++++|..++ +.+-..
T Consensus 265 ~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG-~~~w~~ 342 (571)
T 2ad6_A 265 PGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENG-NLIVAE 342 (571)
T ss_dssp CSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTC-CEEEEE
T ss_pred CCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCC-CEEeee
Confidence 359999999999887765321 2221 22224563 35778889999999999874 333322
Q ss_pred ccCC-------------CCe--------------------------EEEEEcCCCCEEEEEe------------------
Q psy6213 181 TAHS-------------GPI--------------------------FACDWHPEHAWLATAS------------------ 203 (330)
Q Consensus 181 ~~~~-------------~~i--------------------------~~~~~~~~~~~l~~~~------------------ 203 (330)
+... .++ ..++++|+..++++..
T Consensus 343 ~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~ 422 (571)
T 2ad6_A 343 KVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQ 422 (571)
T ss_dssp ESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTS
T ss_pred cccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCC
Confidence 2110 111 2467888877776654
Q ss_pred -------------------cCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCcc
Q psy6213 204 -------------------RDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIP 264 (330)
Q Consensus 204 -------------------~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~ 264 (330)
.+|.|..||..+++..... .....+....+...+..+++ ++ .++.|+.+|.++++.
T Consensus 423 ~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~-~~~~~~~~~~~~t~gg~v~~-g~--~dg~l~a~D~~tG~~- 497 (571)
T 2ad6_A 423 FFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTK-WEKFAAWGGTLYTKGGLVWY-AT--LDGYLKALDNKDGKE- 497 (571)
T ss_dssp CCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEE-EESSCCCSBCEEETTTEEEE-EC--TTSEEEEEETTTCCE-
T ss_pred ccccccceeccCccccCCCCCCeEEEEECCCCCEEEEe-cCCCCccceeEEECCCEEEE-Ec--CCCeEEEEECCCCCE-
Confidence 2478999999888554332 22222222222223444455 44 599999999999986
Q ss_pred ceEeecCCC-CeEEEEEecCCCEEEE
Q psy6213 265 LASFTEHKD-VVSGLAWRGDPQLFIA 289 (330)
Q Consensus 265 ~~~~~~~~~-~v~~~~~~~~~~~l~s 289 (330)
+..+..... .-.-+.+..+|+.++.
T Consensus 498 lw~~~~~~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 498 LWNFKMPSGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp EEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred EEEEeCCCCcEeeeEEEEECCEEEEE
Confidence 444443221 1122345567764443
No 269
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.96 E-value=5.3e-07 Score=69.04 Aligned_cols=179 Identities=10% Similarity=0.077 Sum_probs=120.3
Q ss_pred ceEEEEeeCCCe-eecC-C--CeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECC
Q psy6213 7 VHKHGLKADNGL-AQPS-R--NVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLG 82 (330)
Q Consensus 7 v~~~~~s~~~~~-~~~g-d--~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 82 (330)
...+.|++ +.+ .++| . ..|+.+|+++++......+..... . ..++.. ++.+......++.+.+||..
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~f-----g-eGi~~~--~~~ly~ltw~~~~v~v~D~~ 93 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYF-----G-AGIVAW--RDRLIQLTWRNHEGFVYDLA 93 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCC-----E-EEEEEE--TTEEEEEESSSSEEEEEETT
T ss_pred cccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcc-----e-eEEEEe--CCEEEEEEeeCCEEEEEECC
Confidence 45888986 555 7777 4 599999999999887765543211 1 233443 45555666678999999998
Q ss_pred CCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCC-----CCeEEEEEcCCCCcEEE
Q psy6213 83 QISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNT-----ESVRDVEFNPHSPYAFA 157 (330)
Q Consensus 83 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~~~~~~~~~ 157 (330)
+ .+.+.++.... .-..++ + ++..|+.+..++.|.++|..+.+.+..+.... ..++.+.+. ++. +++
T Consensus 94 t---l~~~~ti~~~~-~Gwglt--~-dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~-lya 164 (243)
T 3mbr_X 94 T---LTPRARFRYPG-EGWALT--S-DDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE-LLA 164 (243)
T ss_dssp T---TEEEEEEECSS-CCCEEE--E-CSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-EEE
T ss_pred c---CcEEEEEeCCC-CceEEe--e-CCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE-EEE
Confidence 8 67777766432 234444 4 44555555568899999999988877776422 245566765 454 666
Q ss_pred EEecCCcEEEEecCCCccceeeecc-------------CCCCeEEEEEcCCCCEEEEEec
Q psy6213 158 SVSENGTIQQWDVRRPEKCFYQFTA-------------HSGPIFACDWHPEHAWLATASR 204 (330)
Q Consensus 158 ~~~~dg~i~i~d~~~~~~~~~~~~~-------------~~~~i~~~~~~~~~~~l~~~~~ 204 (330)
..-.+..|.+.|.++ ++.+..+.. .....+.|+++|+++.|++.+.
T Consensus 165 nvw~s~~I~vIDp~t-G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 165 NVWLTSRIARIDPAS-GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EETTTTEEEEECTTT-CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EECCCCeEEEEECCC-CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 665688999999998 444443321 1235689999998777766664
No 270
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.93 E-value=7.5e-07 Score=81.14 Aligned_cols=242 Identities=12% Similarity=0.074 Sum_probs=130.7
Q ss_pred cceEEEEe-eCCCeeecC---C----CeEEEEEcCCc-ceeeeeceeeccccccccceeeeeecccCCcEEEEEcCC---
Q psy6213 6 PVHKHGLK-ADNGLAQPS---R----NVFKIFLIKDT-EFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATN--- 73 (330)
Q Consensus 6 ~v~~~~~s-~~~~~~~~g---d----~~i~iw~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d--- 73 (330)
.+...+|| |||++++.+ + ..|+++|++++ +.... .+. .....++|+| +++.|+....+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~--------~~~~~~~Wsp-Dg~~l~y~~~d~~~ 244 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVS--------GTNGEIVWGP-DHTSLFYVTKDETL 244 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEE--------EECSCCEECS-STTEEEEEEECTTC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-ccc--------CceeeEEEec-CCCEEEEEEECCCC
Confidence 56788999 999985533 2 25999999988 63211 111 1125789999 88777766654
Q ss_pred --CcEEEEECCCCCCCceeEEec-ccccceeEEEEEecCCCEEEEEec---CCcEEEEEeecCc-ee--eee-ecCCCCe
Q psy6213 74 --GAVVVWNLGQISRSKQERVFN-DHKRTVNKVSFHYVESNWLISGSQ---DGTMRLFDIRCQE-ST--KIF-HSNTESV 143 (330)
Q Consensus 74 --g~i~iw~~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~---d~~i~i~d~~~~~-~~--~~~-~~~~~~v 143 (330)
..|.++++.+.. ......+. ........+.|+| ++++|+..+. ...|+++|+.++. .. ..+ .......
T Consensus 245 ~~~~v~~~~lgt~~-~~~~lv~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~ 322 (751)
T 2xe4_A 245 RENKVWRHVMGKLQ-SEDVCLYEEHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVR 322 (751)
T ss_dssp CEEEEEEEETTSCG-GGCEEEEECCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCC
T ss_pred CCCEEEEEECCCCc-hhcEEEEecCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCce
Confidence 257788886621 11122222 2223456789998 7887776552 3468888887652 12 223 3234455
Q ss_pred EEEEEcCCCCcEEEEEecC----CcEEEEecCCCccceee-eccCCC--CeEEEEEcCCCCEEEEEecCCc--EEEEeC-
Q psy6213 144 RDVEFNPHSPYAFASVSEN----GTIQQWDVRRPEKCFYQ-FTAHSG--PIFACDWHPEHAWLATASRDKT--IKVWDL- 213 (330)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~d----g~i~i~d~~~~~~~~~~-~~~~~~--~i~~~~~~~~~~~l~~~~~dg~--i~i~d~- 213 (330)
.++.|+. ++.+++....+ ..|..+|+.++ ..... +..+.. .+..+.+. .+.++++...++. |.++|+
T Consensus 323 ~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~-~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl~ 399 (751)
T 2xe4_A 323 YDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQP-SDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMAD 399 (751)
T ss_dssp EEEEEET-TTEEEEEECTTTCTTCEEEEEETTST-TCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEECC
T ss_pred EEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCc-ccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEecc
Confidence 5555544 55455555544 25666676542 12222 223333 34555554 3345566667775 555565
Q ss_pred ------CCCc-cccceeccccceEEEEE----cCCCCeEEEEee-cccCCeEEEEEccCCC
Q psy6213 214 ------SIKP-SLEYSINTIASVSRIKW----RPQRKFHLASCS-LVVDSSVNVWDIRRPY 262 (330)
Q Consensus 214 ------~~~~-~~~~~~~~~~~v~~~~~----~~~~~~l~~~~~-~~~~~~i~i~d~~~~~ 262 (330)
..++ ...........+..+.+ ++++..++.+.+ ...-..+..+|+.+++
T Consensus 400 ~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~ 460 (751)
T 2xe4_A 400 SQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS 460 (751)
T ss_dssp TTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC
T ss_pred cccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 2332 11111111222334433 456665555544 1122567778877664
No 271
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.92 E-value=4.9e-06 Score=64.61 Aligned_cols=197 Identities=8% Similarity=0.070 Sum_probs=127.1
Q ss_pred ccceEEEEeeCCCe-eecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEEC
Q psy6213 5 SPVHKHGLKADNGL-AQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNL 81 (330)
Q Consensus 5 ~~v~~~~~s~~~~~-~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~ 81 (330)
+.+..++|+|++.. .++. ++.|...|.. ++....+.+... .....+++.+ ++.++++.-.++.+.++++
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~------~D~EGIa~~~-~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV------KDLETIEYIG-DNQFVISDERDYAIYVISL 98 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC------SSEEEEEECS-TTEEEEEETTTTEEEEEEE
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC------CChHHeEEeC-CCEEEEEECCCCcEEEEEc
Confidence 46899999998765 4444 8888889988 777666544321 1136788887 7776666666788999988
Q ss_pred CCCCCCceeEEec------ccccceeEEEEEecCCCEEEEEecCCcEEEEEeec---Cceeeeee-------cCCCCeEE
Q psy6213 82 GQISRSKQERVFN------DHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC---QESTKIFH-------SNTESVRD 145 (330)
Q Consensus 82 ~~~~~~~~~~~~~------~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~---~~~~~~~~-------~~~~~v~~ 145 (330)
............. ........++|.| .++.|.++.......+|.++. ...+..+. .....+..
T Consensus 99 ~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~-~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~ 177 (255)
T 3qqz_A 99 TPNSEVKILKKIKIPLQESPTNCGFEGLAYSR-QDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSG 177 (255)
T ss_dssp CTTCCEEEEEEEECCCSSCCCSSCCEEEEEET-TTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCE
T ss_pred CCCCeeeeeeeeccccccccccCCcceEEEeC-CCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCcee
Confidence 7633211122221 2334568999998 565666666655566666651 11122221 12345789
Q ss_pred EEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccC---------CCCeEEEEEcCCCCEEEEEecCCcEEEEeC
Q psy6213 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAH---------SGPIFACDWHPEHAWLATASRDKTIKVWDL 213 (330)
Q Consensus 146 ~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~---------~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 213 (330)
++++|...++++....+..+..+|.+. +.+..+.-. -...-.|+|.++|++.++ ++-+.++.|.-
T Consensus 178 l~~dp~tg~lliLS~~s~~L~~~d~~g--~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 178 AEFNQQKNTLLVLSHESRALQEVTLVG--EVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTC--CEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred EEEcCCCCeEEEEECCCCeEEEEcCCC--CEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 999999888888888889999999774 333332211 125689999999985555 66666666643
No 272
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.92 E-value=8.9e-08 Score=85.95 Aligned_cols=274 Identities=7% Similarity=-0.003 Sum_probs=144.6
Q ss_pred EEEEee-CCCe-eecC-CC-----------eEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcC-C
Q psy6213 9 KHGLKA-DNGL-AQPS-RN-----------VFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGAT-N 73 (330)
Q Consensus 9 ~~~~s~-~~~~-~~~g-d~-----------~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d 73 (330)
++++.| +|++ +.+| +. .+.+||..+++........... ...+.++++.+ ++.+++.|+. +
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~----~~~~~~~~~~~-~g~lyv~GG~~~ 264 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKH----DMFCPGISMDG-NGQIVVTGGNDA 264 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSC----CCSSCEEEECT-TSCEEEECSSST
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCC----CCccccccCCC-CCCEEEeCCCCC
Confidence 567777 8888 4444 22 6889999887754433222111 11124467777 8899999884 4
Q ss_pred CcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEe-cC-----CcEEEEEeecCceeeee----ecCCCCe
Q psy6213 74 GAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGS-QD-----GTMRLFDIRCQESTKIF----HSNTESV 143 (330)
Q Consensus 74 g~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~-~d-----~~i~i~d~~~~~~~~~~----~~~~~~v 143 (330)
..+.+||..+. .......+... ..-.+++..+ ++++++.|+ .+ ..+.+||..+.+-...- ......-
T Consensus 265 ~~v~~yd~~t~-~W~~~~~~~~~-R~~~s~~~~~-dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~ 341 (656)
T 1k3i_A 265 KKTSLYDSSSD-SWIPGPDMQVA-RGYQSSATMS-DGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTAD 341 (656)
T ss_dssp TCEEEEEGGGT-EEEECCCCSSC-CSSCEEEECT-TSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCC
T ss_pred CceEEecCcCC-ceeECCCCCcc-ccccceEEec-CCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccccccccc
Confidence 57999998762 12222212111 1122344444 788888888 34 56899998776533210 0000000
Q ss_pred EEEEEcCCCCcEEEEEecCC---------cEEEEecCCCccceeeeccCC---------CCeEEEEEcC-CCCEEEEEec
Q psy6213 144 RDVEFNPHSPYAFASVSENG---------TIQQWDVRRPEKCFYQFTAHS---------GPIFACDWHP-EHAWLATASR 204 (330)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~dg---------~i~i~d~~~~~~~~~~~~~~~---------~~i~~~~~~~-~~~~l~~~~~ 204 (330)
....+..++. +++.++.+| .+..||..+... ......+. ..-.++.|.. ++++++.|+.
T Consensus 342 ~~~~~~~~~~-iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w-~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~ 419 (656)
T 1k3i_A 342 KQGLYRSDNH-AWLFGWKKGSVFQAGPSTAMNWYYTSGSGD-VKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGS 419 (656)
T ss_dssp TTGGGTTTCS-CCEEECGGGCEEECCSSSEEEEEECSTTCE-EEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCB
T ss_pred ccceeecCCc-eEEEECCCCcEEEecCccceeeeecCCcce-eecCCccccccccCCCCCCCceEeccCCCCeEEEEeCC
Confidence 0011223333 455665544 467788876331 11111111 1223444433 6788888885
Q ss_pred CC-----------cEEEEeCCCCccccc---eeccccceEEEEEcCCCCeEEEEeecc--------cCCeEEEEEccCCC
Q psy6213 205 DK-----------TIKVWDLSIKPSLEY---SINTIASVSRIKWRPQRKFHLASCSLV--------VDSSVNVWDIRRPY 262 (330)
Q Consensus 205 dg-----------~i~i~d~~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~~~--------~~~~i~i~d~~~~~ 262 (330)
++ .+.+||..+..-... ..+....-.+++..|+++.+++++... .-..+.+||..+.+
T Consensus 420 ~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 420 PDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp SSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred CCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 43 577888776532211 112222234556678998655555310 02568999987654
Q ss_pred cc-ceEeecCCCCeEEEEEecCCCEEEEeec
Q psy6213 263 IP-LASFTEHKDVVSGLAWRGDPQLFIASSR 292 (330)
Q Consensus 263 ~~-~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 292 (330)
-. +..+...........+.||+++++.|+.
T Consensus 500 W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 500 FYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred eeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 21 1111111112234456689999999885
No 273
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.90 E-value=1.5e-06 Score=77.95 Aligned_cols=261 Identities=9% Similarity=0.096 Sum_probs=148.3
Q ss_pred CCCeeecC-CCeEEEEEcCCcceeeeeceeecccccccccee-eeeecccCCcEEEEEcC------CCcEEEEECCCCCC
Q psy6213 15 DNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCN-DVAWSCIEENHIATGAT------NGAVVVWNLGQISR 86 (330)
Q Consensus 15 ~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~------dg~i~iw~~~~~~~ 86 (330)
+++.++.. |+.|..+|.++|+..-......... ...+. .... .+..++++.. +|.|..+|..+
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~---~~~~~~~P~v---~~~~v~vg~~~~~~~~~g~v~a~D~~t--- 187 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAK---PYSITGAPRV---VKGKVIIGNGGAEYGVRGFVSAYDADT--- 187 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTS---SCBCCSCCEE---ETTEEEECCBCTTTCCBCEEEEEETTT---
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCC---cceecCCCEE---ECCEEEEeCCCCCcCCCCEEEEEECCC---
Confidence 44445555 9999999999998776554421110 00001 1111 2344555543 58899999987
Q ss_pred CceeEEeccc-------------------------------ccceeEEEEEecCCCEEEEEecCC---------------
Q psy6213 87 SKQERVFNDH-------------------------------KRTVNKVSFHYVESNWLISGSQDG--------------- 120 (330)
Q Consensus 87 ~~~~~~~~~~-------------------------------~~~i~~i~~~~~~~~~l~~~~~d~--------------- 120 (330)
++.+-.+... ......+++.| +.++++.++.++
T Consensus 188 G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~-~~~~vy~~~~~g~~w~~~~~~~~~gd~ 266 (668)
T 1kv9_A 188 GKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDP-ELDLLYVGTGNGSPWNREVRSPGGGDN 266 (668)
T ss_dssp CCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEET-TTTEEEEECCCEESSCHHHHSTTCCCC
T ss_pred CcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcC-CCCEEEEeCCCCCccccCCCCCCCCCc
Confidence 4444433210 01112467777 667888877665
Q ss_pred ----cEEEEEeecCceeeeeecC--C-------CCeEEEEEcCCCC--cEEEEEecCCcEEEEecCCCccceeeeccCC-
Q psy6213 121 ----TMRLFDIRCQESTKIFHSN--T-------ESVRDVEFNPHSP--YAFASVSENGTIQQWDVRRPEKCFYQFTAHS- 184 (330)
Q Consensus 121 ----~i~i~d~~~~~~~~~~~~~--~-------~~v~~~~~~~~~~--~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~- 184 (330)
.|..+|.++++.+-.++.. . .+.....+..+++ ..++.++.+|.++++|.+++ +.+...+...
T Consensus 267 l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG-~~l~~~~~~~~ 345 (668)
T 1kv9_A 267 LYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNG-KLISAEKFGKV 345 (668)
T ss_dssp TTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTC-CEEEEEESSCC
T ss_pred eeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCC-CEecccccccc
Confidence 3999999999988777642 1 2222223333443 25888899999999999884 3331111000
Q ss_pred -----------CC------------------------eEEEEEcCCCCEEEEEe--------------------------
Q psy6213 185 -----------GP------------------------IFACDWHPEHAWLATAS-------------------------- 203 (330)
Q Consensus 185 -----------~~------------------------i~~~~~~~~~~~l~~~~-------------------------- 203 (330)
.+ -..++++|+..+++...
T Consensus 346 ~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 425 (668)
T 1kv9_A 346 TWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGF 425 (668)
T ss_dssp CSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCG
T ss_pred ccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccc
Confidence 00 11267888766665421
Q ss_pred ----------cCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCC
Q psy6213 204 ----------RDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKD 273 (330)
Q Consensus 204 ----------~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~ 273 (330)
.+|.|..||+.+++..... ....+.....+...+..++++ + .++.++.||.++++. +..+.....
T Consensus 426 ~~~~~~p~~~~~g~l~A~D~~tG~~~W~~-~~~~~~~~~~~~t~gg~vf~g-~--~dg~l~a~d~~tG~~-l~~~~~~~~ 500 (668)
T 1kv9_A 426 ADATDVPAAVVSGALLAWDPVKQKAAWKV-PYPTHWNGGTLSTAGNLVFQG-T--AAGQMHAYSADKGEA-LWQFEAQSG 500 (668)
T ss_dssp GGCCCCCGGGCEEEEEEEETTTTEEEEEE-EESSSCCCCEEEETTTEEEEE-C--TTSEEEEEETTTCCE-EEEEECSSC
T ss_pred cccCCCCCCCccceEEEEeCCCCcEEEEc-cCCCCCcCceeEeCCCEEEEE-C--CcccchhhhhhcChh-heEecCCCC
Confidence 2377999999988554332 222333333334455554554 5 699999999999976 555544322
Q ss_pred Ce-EEEEEecCCC-EEEEee
Q psy6213 274 VV-SGLAWRGDPQ-LFIASS 291 (330)
Q Consensus 274 ~v-~~~~~~~~~~-~l~s~~ 291 (330)
.. .-+.+..+|+ +++.++
T Consensus 501 ~~~~p~~~~~~G~~yva~~~ 520 (668)
T 1kv9_A 501 IVAAPMTFELAGRQYVAIMA 520 (668)
T ss_dssp CCSCCEEEEETTEEEEEEEE
T ss_pred cccCceEEEECCEEEEEEEe
Confidence 11 2233444665 444443
No 274
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.88 E-value=2e-06 Score=72.92 Aligned_cols=238 Identities=11% Similarity=0.110 Sum_probs=139.6
Q ss_pred cceEEEEee-C-CCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcC-CC----cEE
Q psy6213 6 PVHKHGLKA-D-NGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGAT-NG----AVV 77 (330)
Q Consensus 6 ~v~~~~~s~-~-~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-dg----~i~ 77 (330)
....++++| + +.+.++. .+.|+.+|++.+....... . ......++|++ +++.|+++.. ++ .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~--~------~~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~ 208 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS--G------LSKVRTICWTH-EADSMIITNDQNNNDRPNNY 208 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC--C------CSCEEEEEECT-TSSEEEEEECCSCTTSEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec--C------CCCcceEEEeC-CCCEEEEEeCCCCcccceEE
Confidence 457889997 3 4445554 6889999988766543322 1 11248899999 8885555543 22 233
Q ss_pred EEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeec-CCCCeEEEEEcCCCCcEE
Q psy6213 78 VWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHS-NTESVRDVEFNPHSPYAF 156 (330)
Q Consensus 78 iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~ 156 (330)
.++... .......+. .......++++|.++.++++-..++.|..++..++........ .......++|+|++++++
T Consensus 209 ~~~~~g--~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~ly 285 (430)
T 3tc9_A 209 ILTRES--GFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAY 285 (430)
T ss_dssp EEEGGG--TSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEE
T ss_pred EEeCCC--ceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEE
Confidence 344322 111112222 1234577889885677676766778999999876654222222 224578899999999767
Q ss_pred EEEecCCcEEEEecCCCccc---eeeeccC---------------CCCeE-EEEEc--------CCCCEEEEEecCCcEE
Q psy6213 157 ASVSENGTIQQWDVRRPEKC---FYQFTAH---------------SGPIF-ACDWH--------PEHAWLATASRDKTIK 209 (330)
Q Consensus 157 ~~~~~dg~i~i~d~~~~~~~---~~~~~~~---------------~~~i~-~~~~~--------~~~~~l~~~~~dg~i~ 209 (330)
++-...+.|..++....... ...+.+. -.... .++.. +++.+.++-...+.|+
T Consensus 286 v~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~ 365 (430)
T 3tc9_A 286 IVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIR 365 (430)
T ss_dssp EEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEE
T ss_pred EEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEE
Confidence 77677888999887632111 1111111 11123 45543 3466666666677888
Q ss_pred EEeCCCCccccceecc------------------ccceEEEEEcCCCCeEEEEeecccCCeEEEEEcc
Q psy6213 210 VWDLSIKPSLEYSINT------------------IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIR 259 (330)
Q Consensus 210 i~d~~~~~~~~~~~~~------------------~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~ 259 (330)
.++.. +.. ...... -.....++++|++..|+++-. .+..|+.++++
T Consensus 366 ~i~~~-G~v-~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~--~n~rIr~i~~e 429 (430)
T 3tc9_A 366 ILTPQ-GRV-TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDR--ENRRIRKIGYE 429 (430)
T ss_dssp EECTT-SEE-EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG--GGTEEEEEEEC
T ss_pred EECCC-CcE-EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEEC--CCCeEEEEccC
Confidence 88843 322 111111 125789999996444566665 57888888764
No 275
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.86 E-value=4e-06 Score=71.05 Aligned_cols=233 Identities=11% Similarity=0.117 Sum_probs=133.1
Q ss_pred eeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEec-CC----cEEEEEee
Q psy6213 54 CNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQ-DG----TMRLFDIR 128 (330)
Q Consensus 54 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~-d~----~i~i~d~~ 128 (330)
...++++|.++..|+++...+.|+.+|+.. .. +..+.........+++++ +++.|+++.. ++ .+..++.
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~---~~-v~~~~~~~~~P~~ia~d~-~G~~lyvad~~~~~~~~~v~~~~~- 212 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEK---EY-VSTVYSGLSKVRTICWTH-EADSMIITNDQNNNDRPNNYILTR- 212 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTT---TE-EEEEECCCSCEEEEEECT-TSSEEEEEECCSCTTSEEEEEEEG-
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCC---CE-EEEEecCCCCcceEEEeC-CCCEEEEEeCCCCcccceEEEEeC-
Confidence 378899872134455554447899999876 33 333333445688999998 7775555543 22 2333443
Q ss_pred cCcee--eeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeec-cCCCCeEEEEEcCCCCEE-EEEec
Q psy6213 129 CQEST--KIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFT-AHSGPIFACDWHPEHAWL-ATASR 204 (330)
Q Consensus 129 ~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l-~~~~~ 204 (330)
.+... ..+.. ......++++|++.+++++-..++.|..++...... ..... ........++|+|+|++| ++-..
T Consensus 213 ~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~-~~~~~~~~~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 213 ESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET-TPLFTIQDSGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp GGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE-EEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred CCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEEEcCCCCcceeEEEcCCCCEEEEEECC
Confidence 33222 22322 234567889995444677766788999999875322 11111 122456789999999954 45556
Q ss_pred CCcEEEEeCCCCc-c---ccceec---------------cccceE-EEEEc--------CCCCeEEEEeecccCCeEEEE
Q psy6213 205 DKTIKVWDLSIKP-S---LEYSIN---------------TIASVS-RIKWR--------PQRKFHLASCSLVVDSSVNVW 256 (330)
Q Consensus 205 dg~i~i~d~~~~~-~---~~~~~~---------------~~~~v~-~~~~~--------~~~~~l~~~~~~~~~~~i~i~ 256 (330)
.+.|..++..... . ...... ...... .++.. +++. |+++-. ..+.|+.+
T Consensus 291 ~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~-lyvaD~--~n~~I~~i 367 (430)
T 3tc9_A 291 QHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYD-FYFCDR--ENHCIRIL 367 (430)
T ss_dssp TTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEE-EEEEEG--GGTEEEEE
T ss_pred CCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCe-EEEEEC--CCcEEEEE
Confidence 7889998865321 0 000000 011233 45553 3344 455544 47888888
Q ss_pred EccCCCccceEeecC------------------CCCeEEEEEecC-CCEEEEeecCCeEeeee
Q psy6213 257 DIRRPYIPLASFTEH------------------KDVVSGLAWRGD-PQLFIASSRVSIIPRAK 300 (330)
Q Consensus 257 d~~~~~~~~~~~~~~------------------~~~v~~~~~~~~-~~~l~s~~~dg~i~iw~ 300 (330)
+. .+. +..+.+. -....+++++|+ +.++++-.....|+...
T Consensus 368 ~~-~G~--v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~ 427 (430)
T 3tc9_A 368 TP-QGR--VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIG 427 (430)
T ss_dssp CT-TSE--EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEE
T ss_pred CC-CCc--EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEc
Confidence 84 332 2333221 124789999994 66666555667777664
No 276
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.86 E-value=1.3e-06 Score=74.01 Aligned_cols=238 Identities=10% Similarity=0.072 Sum_probs=141.1
Q ss_pred ccceEEEEeeC---CCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCC---C-cE
Q psy6213 5 SPVHKHGLKAD---NGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATN---G-AV 76 (330)
Q Consensus 5 ~~v~~~~~s~~---~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d---g-~i 76 (330)
.....++|+|+ |.+.++. .+.|+.++..++....... . ......+++++ +++++++.... . .+
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-------~-~~~P~giavd~-dG~lyVad~~~~~~~~gv 209 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-------N-IGQCADVNFTL-NGDMVVVDDQSSDTNTGI 209 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-------C-CSCEEEEEECT-TCCEEEEECCSCTTSEEE
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-------C-CCCccEEEECC-CCCEEEEcCCCCcccceE
Confidence 34578999985 6665555 6889999988776554332 1 11248999999 88844444321 1 13
Q ss_pred EEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeee-ec-CCCCeEEEEEcCCCCc
Q psy6213 77 VVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIF-HS-NTESVRDVEFNPHSPY 154 (330)
Q Consensus 77 ~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~-~~~~v~~~~~~~~~~~ 154 (330)
...+.... ......+. .-.....+++.|.++.++++-..++.|+.+|..++.....+ .. ....-..++|+|++++
T Consensus 210 ~~~~~~~~--~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~ 286 (433)
T 4hw6_A 210 YLFTRASG--FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDW 286 (433)
T ss_dssp EEECGGGT--TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSE
T ss_pred EEEECCCC--eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCE
Confidence 33332221 11111121 22445678888756666666666788999998766652222 21 1223347999999986
Q ss_pred EEEEEecCCcEEEEecCCCccc---eeeecc---------------CCCCeEEEEE---------cCCCCEEEEEecCCc
Q psy6213 155 AFASVSENGTIQQWDVRRPEKC---FYQFTA---------------HSGPIFACDW---------HPEHAWLATASRDKT 207 (330)
Q Consensus 155 ~~~~~~~dg~i~i~d~~~~~~~---~~~~~~---------------~~~~i~~~~~---------~~~~~~l~~~~~dg~ 207 (330)
++++-...+.|+.++....... ...+.+ .-.....+++ .+++.++++-...+.
T Consensus 287 LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~ 366 (433)
T 4hw6_A 287 AYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHT 366 (433)
T ss_dssp EEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTE
T ss_pred EEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCE
Confidence 6677677788999886531111 111111 1123667899 677777777777788
Q ss_pred EEEEeCCCCccccceec------------------cccceEEEEEc-CCCCeEEEEeecccCCeEEEEEcc
Q psy6213 208 IKVWDLSIKPSLEYSIN------------------TIASVSRIKWR-PQRKFHLASCSLVVDSSVNVWDIR 259 (330)
Q Consensus 208 i~i~d~~~~~~~~~~~~------------------~~~~v~~~~~~-~~~~~l~~~~~~~~~~~i~i~d~~ 259 (330)
|+.++.. +.. ..... .......++++ +++. |+++-. .++.|+.++++
T Consensus 367 I~~~~~~-G~v-~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~-lyVaD~--~n~rIr~i~~e 432 (433)
T 4hw6_A 367 VRVLTPE-GRV-TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKC-FYIGDC--DNHRVRKIAPE 432 (433)
T ss_dssp EEEECTT-SEE-EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTE-EEEEEG--GGTEEEEEEEC
T ss_pred EEEECCC-CCE-EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCE-EEEEeC--CCCEEEEEecC
Confidence 9999853 311 11111 12347789999 5555 565555 57888888764
No 277
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.84 E-value=7.1e-06 Score=74.52 Aligned_cols=205 Identities=9% Similarity=0.024 Sum_probs=126.6
Q ss_pred eeeeeecccCCcEEEEEcCCCcEEEEECCCCCC-CceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCce
Q psy6213 54 CNDVAWSCIEENHIATGATNGAVVVWNLGQISR-SKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQES 132 (330)
Q Consensus 54 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 132 (330)
+..++|.+.++.++++-...+.|+.+++..... ......+.........|++.+.+++++++-...+.|.+.+++....
T Consensus 426 ~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~ 505 (791)
T 3m0c_C 426 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKR 505 (791)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSE
T ss_pred eEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeE
Confidence 478899884455555656677888888865211 1222333333456678898874556666777788999999875544
Q ss_pred eeeeecCCCCeEEEEEcCCCCcEEEEEecC-CcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEe-cCCcEEE
Q psy6213 133 TKIFHSNTESVRDVEFNPHSPYAFASVSEN-GTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS-RDKTIKV 210 (330)
Q Consensus 133 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i 210 (330)
...+.........|++.|.+.+++++-... +.|...++.. ......+...-.....|++++.+..|+.+. ..+.|..
T Consensus 506 ~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG-~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~ 584 (791)
T 3m0c_C 506 KTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 584 (791)
T ss_dssp EEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC-CceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEE
Confidence 333443445688999999877555554333 6788888874 222222333345788999998666665554 5567999
Q ss_pred EeCCCCccccceec--cccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCc
Q psy6213 211 WDLSIKPSLEYSIN--TIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYI 263 (330)
Q Consensus 211 ~d~~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~ 263 (330)
+++........... .......|++.. .+|+.+-. ..+.|...|..+++.
T Consensus 585 ~d~dG~~~~~v~~~~~~l~~P~glav~~--~~lYwtD~--~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 585 IDVNGGNRKTILEDEKRLAHPFSLAVFE--DKVFWTDI--INEAIFSANRLTGSD 635 (791)
T ss_dssp EETTSCSCEEEEECTTTTSSEEEEEEET--TEEEEEET--TTTEEEEEETTTCCC
T ss_pred EecCCCceEEEecCCCccCCCCEEEEeC--CEEEEEEC--CCCEEEEEeCCCCcc
Confidence 99876533222221 123445666643 35666665 578888888766643
No 278
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.83 E-value=1.5e-06 Score=79.29 Aligned_cols=195 Identities=8% Similarity=0.031 Sum_probs=112.1
Q ss_pred ceeeeeec-ccCCcEEEEEcC-CC----cEEEEECCCCCCCceeE-EecccccceeEEEEEecCCCEEEEEecC-----C
Q psy6213 53 SCNDVAWS-CIEENHIATGAT-NG----AVVVWNLGQISRSKQER-VFNDHKRTVNKVSFHYVESNWLISGSQD-----G 120 (330)
Q Consensus 53 ~v~~~~~~-~~~~~~l~~~~~-dg----~i~iw~~~~~~~~~~~~-~~~~~~~~i~~i~~~~~~~~~l~~~~~d-----~ 120 (330)
.+...+|| | ++++||.+.. +| .|+++|+.+.. +.+. .+ ......+.|+| +++.|+....+ .
T Consensus 175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~--~~l~~~~---~~~~~~~~Wsp-Dg~~l~y~~~d~~~~~~ 247 (751)
T 2xe4_A 175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPS--QTIADKV---SGTNGEIVWGP-DHTSLFYVTKDETLREN 247 (751)
T ss_dssp EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTT--CCCCCCE---EEECSCCEECS-STTEEEEEEECTTCCEE
T ss_pred EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCC--EeCCccc---cCceeeEEEec-CCCEEEEEEECCCCCCC
Confidence 46789999 9 8888875533 23 49999998730 2111 11 12245788999 77777666654 2
Q ss_pred cEEEEEeecCce--eeeeec-CCCCeEEEEEcCCCCcEEEEEec--CCcEEEEecCCCccce--eee-ccCCCCeEEEEE
Q psy6213 121 TMRLFDIRCQES--TKIFHS-NTESVRDVEFNPHSPYAFASVSE--NGTIQQWDVRRPEKCF--YQF-TAHSGPIFACDW 192 (330)
Q Consensus 121 ~i~i~d~~~~~~--~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~--dg~i~i~d~~~~~~~~--~~~-~~~~~~i~~~~~ 192 (330)
.|+.+++.+++. ...+.. .......+.|+|++++++++... ...|+++|+.++.... ..+ ....+...++.|
T Consensus 248 ~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~ 327 (751)
T 2xe4_A 248 KVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQM 327 (751)
T ss_dssp EEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEE
T ss_pred EEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEee
Confidence 578888876542 233332 23446788999999976665543 3458888987642222 323 333445566665
Q ss_pred cCCCCEEEEEecC----CcEEEEeCCCCccccc-eecccc--ceEEEEEcCCCCeEEEEeecccCCe--EEEEEc
Q psy6213 193 HPEHAWLATASRD----KTIKVWDLSIKPSLEY-SINTIA--SVSRIKWRPQRKFHLASCSLVVDSS--VNVWDI 258 (330)
Q Consensus 193 ~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~-~~~~~~--~v~~~~~~~~~~~l~~~~~~~~~~~--i~i~d~ 258 (330)
+..+.+++....+ ..|..+|+.+...... ...+.. .+..+.+ .+..++++.. .++. |.++++
T Consensus 328 ~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~--~~~~lv~~~~--~~g~~~l~~~dl 398 (751)
T 2xe4_A 328 HGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV--RSNYLVVAGR--RAGLTRIWTMMA 398 (751)
T ss_dssp ETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE--CSSEEEEEEE--ETTEEEEEEEEC
T ss_pred eeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE--ECCEEEEEEE--eCCEEEEEEEec
Confidence 5444444444443 2567777764322222 233333 3445555 4566777776 5775 555564
No 279
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.82 E-value=4.8e-05 Score=67.54 Aligned_cols=229 Identities=8% Similarity=0.009 Sum_probs=143.0
Q ss_pred eeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEeccc
Q psy6213 18 LAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDH 96 (330)
Q Consensus 18 ~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~ 96 (330)
+|... .+.|+..++++.+......... + ..+..++|.+.++.++.+-..++.|..++++. ......+...
T Consensus 8 ~Ll~s~~~~I~~i~l~~~~~~~~~~~~~-----~-~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g---~~~~~v~~~g 78 (628)
T 4a0p_A 8 FLLFSRRADIRRISLETNNNNVAIPLTG-----V-KEASALDFDVTDNRIYWTDISLKTISRAFMNG---SALEHVVEFG 78 (628)
T ss_dssp EEEEEETTEEEEEESSCTTCEEECCCCS-----C-SCEEEEEEETTTTEEEEEETTTTEEEEEETTS---CSCEEEECSS
T ss_pred EEEEEeCCcEEEEECCCCCcceEEEcCC-----C-CceEEEEEECCCCEEEEEECCCCeEEEEECCC---CCcEEEEeCC
Confidence 43334 7788899998755333222211 1 12478999984555555666678899998875 2222223322
Q ss_pred ccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEE-ecCCcEEEEecCCCcc
Q psy6213 97 KRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASV-SENGTIQQWDVRRPEK 175 (330)
Q Consensus 97 ~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~dg~i~i~d~~~~~~ 175 (330)
......+++.+.+++++++-...+.|.+.+++.......+...-.....+++.|...+++.+- +..+.|...++...
T Consensus 79 ~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~-- 156 (628)
T 4a0p_A 79 LDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS-- 156 (628)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC--
T ss_pred CCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC--
Confidence 245778888874566666666678899999875443333323445678999999766555543 22567888887642
Q ss_pred ceeeeccCCCCeEEEEEcCCCCEEEEE-ecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEE
Q psy6213 176 CFYQFTAHSGPIFACDWHPEHAWLATA-SRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254 (330)
Q Consensus 176 ~~~~~~~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~ 254 (330)
....+...-.....++++++++.|..+ ...+.|..+|+..... ............+++.. ..++.+.. ..+.|.
T Consensus 157 ~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~--~~ly~tD~--~~~~I~ 231 (628)
T 4a0p_A 157 ERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ--DYIYWTDW--SRRSIE 231 (628)
T ss_dssp SCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET--TEEEEEET--TTTEEE
T ss_pred ceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC--CEEEEecC--CCCEEE
Confidence 223333345678899999976655555 4567899999876533 22223334556777765 34566665 578899
Q ss_pred EEEccCCC
Q psy6213 255 VWDIRRPY 262 (330)
Q Consensus 255 i~d~~~~~ 262 (330)
..|..+++
T Consensus 232 ~~dk~tg~ 239 (628)
T 4a0p_A 232 RANKTSGQ 239 (628)
T ss_dssp EEETTTCC
T ss_pred EEECCCCC
Confidence 88876554
No 280
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.81 E-value=6.7e-06 Score=72.32 Aligned_cols=273 Identities=13% Similarity=0.091 Sum_probs=154.9
Q ss_pred CCCe-eecC-CCeEEEEEc-CCcceeeeeceeeccc-cc---cccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCC
Q psy6213 15 DNGL-AQPS-RNVFKIFLI-KDTEFVETHNLRVGKN-IN---LNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRS 87 (330)
Q Consensus 15 ~~~~-~~~g-d~~i~iw~~-~~~~~~~~~~~~~~~~-~~---~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~ 87 (330)
++.. +.+. ++.|.-+|. ++++.+-.+....... .. .......++. .+..+++++.|+.+..+|..+ +
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~v~~~dg~l~alD~~t---G 135 (571)
T 2ad6_A 62 GDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY---GAGQIVKKQANGHLLALDAKT---G 135 (571)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE---ETTEEEEECTTSEEEEEETTT---C
T ss_pred CCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE---ECCEEEEEeCCCEEEEEECCC---C
Confidence 4444 4444 688999999 8888765554432211 00 0000011222 356788888899999999988 4
Q ss_pred ceeEEec--cccc--ceeE-EEEEecCCCEEEEEec------CCcEEEEEeecCceeeeeecCCCC--------------
Q psy6213 88 KQERVFN--DHKR--TVNK-VSFHYVESNWLISGSQ------DGTMRLFDIRCQESTKIFHSNTES-------------- 142 (330)
Q Consensus 88 ~~~~~~~--~~~~--~i~~-i~~~~~~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~-------------- 142 (330)
+.+-... .+.. .+.+ .... + ..+++++. ++.|+.+|.++++.+-.+......
T Consensus 136 ~~~W~~~~~~~~~~~~~~~~P~v~--~-g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~ 212 (571)
T 2ad6_A 136 KINWEVEVCDPKVGSTLTQAPFVA--K-DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANP 212 (571)
T ss_dssp CEEEEEECCCGGGTCBCCSCCEEE--T-TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCG
T ss_pred CEEEEecCCCCCccceeccCCEEE--C-CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccc
Confidence 5444332 1110 1211 1111 3 45555554 789999999999987766532110
Q ss_pred ------------------------eEEEEEcCCCCcEEEEEecC----------------CcEEEEecCCCccceeeecc
Q psy6213 143 ------------------------VRDVEFNPHSPYAFASVSEN----------------GTIQQWDVRRPEKCFYQFTA 182 (330)
Q Consensus 143 ------------------------v~~~~~~~~~~~~~~~~~~d----------------g~i~i~d~~~~~~~~~~~~~ 182 (330)
...+++.++.. +++.+..+ +.|..+|.+++ +.+-.++.
T Consensus 213 ~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g-~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG-~~~W~~~~ 290 (571)
T 2ad6_A 213 HYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLN-LFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTG-MAKWGYQK 290 (571)
T ss_dssp GGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTT-EEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTC-CEEEEEES
T ss_pred cccccccccccCcccceecCCCCeeeeEEEcCCCC-eEEEECCCCccccCCccCCCceeEEEEEEEecCCC-cEEEEecC
Confidence 01355666655 45555432 25899999884 44433331
Q ss_pred --CC--------CCeEEEEEcCCCC---EEEEEecCCcEEEEeCCCCccccceeccc-------------cce-------
Q psy6213 183 --HS--------GPIFACDWHPEHA---WLATASRDKTIKVWDLSIKPSLEYSINTI-------------ASV------- 229 (330)
Q Consensus 183 --~~--------~~i~~~~~~~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------~~v------- 229 (330)
|. .++ -+...++|+ .++.++.+|.+.++|..+++.+....... .++
T Consensus 291 ~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~ 369 (571)
T 2ad6_A 291 TPHDEWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFAT 369 (571)
T ss_dssp STTCSSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCC
T ss_pred CCCcccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCC
Confidence 21 111 122224674 57788899999999998885532211100 111
Q ss_pred -------------------EEEEEcCCCCeEEEEeec----------------------------------ccCCeEEEE
Q psy6213 230 -------------------SRIKWRPQRKFHLASCSL----------------------------------VVDSSVNVW 256 (330)
Q Consensus 230 -------------------~~~~~~~~~~~l~~~~~~----------------------------------~~~~~i~i~ 256 (330)
..++++|+...+++.... ..++.|..|
T Consensus 370 ~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~ 449 (571)
T 2ad6_A 370 RMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAF 449 (571)
T ss_dssp CTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEE
T ss_pred CCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEE
Confidence 235778887765554320 025789999
Q ss_pred EccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeec
Q psy6213 257 DIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKN 301 (330)
Q Consensus 257 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~ 301 (330)
|..+++. +-.... ...+.+......+..++.++.||.|+.++.
T Consensus 450 D~~tG~~-~W~~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~ 492 (571)
T 2ad6_A 450 DLTTGKA-KWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDN 492 (571)
T ss_dssp CTTTCCE-EEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEET
T ss_pred ECCCCCE-EEEecC-CCCccceeEEECCCEEEEEcCCCeEEEEEC
Confidence 9998875 333332 222333333335667788999999999974
No 281
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.78 E-value=2.5e-05 Score=70.95 Aligned_cols=225 Identities=13% Similarity=-0.001 Sum_probs=138.1
Q ss_pred EEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecC----ceeeeeecCCC
Q psy6213 66 HIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQ----ESTKIFHSNTE 141 (330)
Q Consensus 66 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~ 141 (330)
+|+.+. ...|+..++.. ..... +......+..++|.+.++.++++-...+.|+.+++... .....+.....
T Consensus 397 ~Ll~an-~~~Ir~i~l~~---~~~~~-l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~ 471 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDR---SEYTS-LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQ 471 (791)
T ss_dssp EEEEEC-BSSEEEECTTS---CCCEE-EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCS
T ss_pred cccccc-ccceeEeeccC---Cccee-eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCC
Confidence 444443 34577777765 22222 22334567889999745556666666788999988753 22333333445
Q ss_pred CeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEe-cC-CcEEEEeCCCCccc
Q psy6213 142 SVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS-RD-KTIKVWDLSIKPSL 219 (330)
Q Consensus 142 ~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~d-g~i~i~d~~~~~~~ 219 (330)
....|++.+.+.+++++-...+.|.+.++.. ......+.........|+++|.+..|+... .. +.|...++......
T Consensus 472 ~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG-~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~ 550 (791)
T 3m0c_C 472 APDGLAVDWIHSNIYWTDSVLGTVSVADTKG-VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 550 (791)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTS-SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred CcceeeeeecCCcEEEEecCCCeEEEEeCCC-CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE
Confidence 5778999988876777777788999999875 222222333445688999999765555554 33 67888888765333
Q ss_pred cceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecC--CCCeEEEEEecCCCEEEEeecCCeEe
Q psy6213 220 EYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEH--KDVVSGLAWRGDPQLFIASSRVSIIP 297 (330)
Q Consensus 220 ~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~s~~~dg~i~ 297 (330)
............|++++.+..|+.+-. ..+.|..+++..... ....... -....+|+...+ .+.++-...+.|.
T Consensus 551 ~lv~~~l~~P~GLavD~~~~~LYwaD~--~~~~I~~~d~dG~~~-~~v~~~~~~l~~P~glav~~~-~lYwtD~~~~~I~ 626 (791)
T 3m0c_C 551 SLVTENIQWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIF 626 (791)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEETT-EEEEEETTTTEEE
T ss_pred EEEeCCCCCceEEEEecCCCeEEEEeC--CCCcEEEEecCCCce-EEEecCCCccCCCCEEEEeCC-EEEEEECCCCEEE
Confidence 333333467899999988887777766 678999999976543 2233221 223456666432 3333334445665
Q ss_pred eee
Q psy6213 298 RAK 300 (330)
Q Consensus 298 iw~ 300 (330)
...
T Consensus 627 ~~d 629 (791)
T 3m0c_C 627 SAN 629 (791)
T ss_dssp EEE
T ss_pred EEe
Confidence 543
No 282
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.78 E-value=8e-06 Score=71.95 Aligned_cols=196 Identities=12% Similarity=0.112 Sum_probs=112.8
Q ss_pred CCCe-eecC-CCeEEEEEc-CCcceeeeeceeeccccc----cccceeeeeecccCCcE----EEEEcCCCcEEEEECCC
Q psy6213 15 DNGL-AQPS-RNVFKIFLI-KDTEFVETHNLRVGKNIN----LNFSCNDVAWSCIEENH----IATGATNGAVVVWNLGQ 83 (330)
Q Consensus 15 ~~~~-~~~g-d~~i~iw~~-~~~~~~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~----l~~~~~dg~i~iw~~~~ 83 (330)
++.+ +.+. ++.|.-+|. ++++.+-.+......... .......++++| .+.. +++++.|+.+..+|..+
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p-~~g~~~~rV~v~t~dg~l~AlDa~T 140 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWP-GDGKTPALILKTQLDGNVAALNAET 140 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEEC-CCSSSCCEEEEECTTSEEEEEETTT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEe-cCCcceeEEEEEcCCCEEEEEECCC
Confidence 4444 4444 688999999 888876655543321100 000012345544 3344 88888899999999988
Q ss_pred CCCCceeEEecccc----cceeE-EEEEecCCCEEEEEe------cCCcEEEEEeecCceeeeeecCCCC----------
Q psy6213 84 ISRSKQERVFNDHK----RTVNK-VSFHYVESNWLISGS------QDGTMRLFDIRCQESTKIFHSNTES---------- 142 (330)
Q Consensus 84 ~~~~~~~~~~~~~~----~~i~~-i~~~~~~~~~l~~~~------~d~~i~i~d~~~~~~~~~~~~~~~~---------- 142 (330)
++.+-...... ..+.+ -... ++ .+++++ .++.|+.+|.++++.+-.+......
T Consensus 141 ---G~~~W~~~~~~~~~~~~~~ssP~v~--~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~ 214 (599)
T 1w6s_A 141 ---GETVWKVENSDIKVGSTLTIAPYVV--KD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFN 214 (599)
T ss_dssp ---CCEEEEEECCCGGGTCBCCSCCEEE--TT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTT
T ss_pred ---CCEEEeecCCCCCccceeecCCEEE--CC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccc
Confidence 45443332211 01211 1122 34 455554 3789999999999987666532211
Q ss_pred ---------------------------e-EEEEEcCCCCcEEEEEecC----------------CcEEEEecCCCcccee
Q psy6213 143 ---------------------------V-RDVEFNPHSPYAFASVSEN----------------GTIQQWDVRRPEKCFY 178 (330)
Q Consensus 143 ---------------------------v-~~~~~~~~~~~~~~~~~~d----------------g~i~i~d~~~~~~~~~ 178 (330)
+ ..+++.+... +++.+..+ +.|..+|.+++ +..-
T Consensus 215 ~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g-~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG-~~~W 292 (599)
T 1w6s_A 215 IKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTN-LIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTG-EAKF 292 (599)
T ss_dssp TTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTT-EEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTC-CEEE
T ss_pred cccccccccccccccCCCcceecCCCccccceeEeCCCC-EEEEeCCCCccccCcccCCCccccceEEEEeCCCC-ceee
Confidence 0 1345666666 56666554 37899999884 4443
Q ss_pred eecc--CCC-------CeEEEEEc-CCC---CEEEEEecCCcEEEEeCCCCccc
Q psy6213 179 QFTA--HSG-------PIFACDWH-PEH---AWLATASRDKTIKVWDLSIKPSL 219 (330)
Q Consensus 179 ~~~~--~~~-------~i~~~~~~-~~~---~~l~~~~~dg~i~i~d~~~~~~~ 219 (330)
.++. |.. ...-+... .+| ..++.++.+|.+.++|.++++.+
T Consensus 293 ~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 346 (599)
T 1w6s_A 293 GYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALV 346 (599)
T ss_dssp EEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred EeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEe
Confidence 3332 211 11112222 467 56778889999999999988653
No 283
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.77 E-value=1.6e-05 Score=67.37 Aligned_cols=236 Identities=9% Similarity=0.096 Sum_probs=134.7
Q ss_pred eeeeeeccc-CCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecC---C-cEEEEEee
Q psy6213 54 CNDVAWSCI-EENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQD---G-TMRLFDIR 128 (330)
Q Consensus 54 v~~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d---~-~i~i~d~~ 128 (330)
...++|.|+ ++..|+.+...+.|+.++..+ .... .+.........+++++ +++++++.... . .+...+..
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~---g~v~-~~~~~~~~P~giavd~-dG~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVN---QYVD-IKTTNIGQCADVNFTL-NGDMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTT---TEEE-EECCCCSCEEEEEECT-TCCEEEEECCSCTTSEEEEEECGG
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCC---CEEE-EeecCCCCccEEEECC-CCCEEEEcCCCCcccceEEEEECC
Confidence 378999983 244555555448899999865 3333 3333445688999998 77754444321 1 23333332
Q ss_pred cCce-eeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeecc-CCCCeEEEEEcCCCCEEE-EEecC
Q psy6213 129 CQES-TKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA-HSGPIFACDWHPEHAWLA-TASRD 205 (330)
Q Consensus 129 ~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~-~~~~d 205 (330)
.+.. ...+. .......++++|++.+++++-..++.|+.+|..++......+.. ....-..++|+|+++.|+ +-...
T Consensus 216 ~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~ 294 (433)
T 4hw6_A 216 SGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK 294 (433)
T ss_dssp GTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT
T ss_pred CCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC
Confidence 2211 01222 22345678899944446666666788999998753221111111 122234699999998554 44566
Q ss_pred CcEEEEeCCC--Ccc--ccceec---------------cccceEEEEE---------cCCCCeEEEEeecccCCeEEEEE
Q psy6213 206 KTIKVWDLSI--KPS--LEYSIN---------------TIASVSRIKW---------RPQRKFHLASCSLVVDSSVNVWD 257 (330)
Q Consensus 206 g~i~i~d~~~--~~~--~~~~~~---------------~~~~v~~~~~---------~~~~~~l~~~~~~~~~~~i~i~d 257 (330)
+.|+.++... +.. ...... .......+++ .+++. |+++-. ..+.|+.++
T Consensus 295 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD~--~n~~I~~~~ 371 (433)
T 4hw6_A 295 HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCDR--DSHTVRVLT 371 (433)
T ss_dssp TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEET--TTTEEEEEC
T ss_pred CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEEC--CCCEEEEEC
Confidence 7899988653 211 001111 1234677899 66666 455554 578999998
Q ss_pred ccCCCccceEeecC------------------CCCeEEEEEe-cCCCEEEEeecCCeEeeeec
Q psy6213 258 IRRPYIPLASFTEH------------------KDVVSGLAWR-GDPQLFIASSRVSIIPRAKN 301 (330)
Q Consensus 258 ~~~~~~~~~~~~~~------------------~~~v~~~~~~-~~~~~l~s~~~dg~i~iw~~ 301 (330)
. ++. +..+.+. -....+++++ +++.++++=...+.|+....
T Consensus 372 ~-~G~--v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~ 431 (433)
T 4hw6_A 372 P-EGR--VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAP 431 (433)
T ss_dssp T-TSE--EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEE
T ss_pred C-CCC--EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEec
Confidence 5 332 3333221 1237789999 56766666566677777643
No 284
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.77 E-value=1.2e-05 Score=68.62 Aligned_cols=247 Identities=11% Similarity=0.088 Sum_probs=145.7
Q ss_pred cceEEEEeeC--CCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeee-------cccCCcEEEEEcCCC
Q psy6213 6 PVHKHGLKAD--NGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAW-------SCIEENHIATGATNG 74 (330)
Q Consensus 6 ~v~~~~~s~~--~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~~~l~~~~~dg 74 (330)
....|+|+|. ++++++. .+.|++.|++++.+......... .. .....++| ++ +++.|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~---~~-~~p~~ia~~~~~~~~d~-~G~~lyvad~~~ 214 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTI---PT-NRIRSIAFNKKIEGYAD-EAEYMIVAIDYD 214 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTS---SC-SBEEEEEECCCBTTTBC-TTCEEEEEECCC
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCcc---cc-CCCcEEEEeecccccCC-CCCEEEEEeCCC
Confidence 3568999983 4444444 56788889888776654432110 11 12488999 98 777666655443
Q ss_pred -------cEEEEECCCCCCCc--e-eEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEee-------cCce-----
Q psy6213 75 -------AVVVWNLGQISRSK--Q-ERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR-------CQES----- 132 (330)
Q Consensus 75 -------~i~iw~~~~~~~~~--~-~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~-------~~~~----- 132 (330)
.|.+++........ . ...+.. -.....++++|.++.++++-..++.|+.+|+. ++..
T Consensus 215 ~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~ 293 (496)
T 3kya_A 215 GKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIV 293 (496)
T ss_dssp TTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBG
T ss_pred CCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccc
Confidence 26666543311111 0 022222 23456788898667777777788899999998 4543
Q ss_pred ------eee-eec-CCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccce---eeeccC---------------CCC
Q psy6213 133 ------TKI-FHS-NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCF---YQFTAH---------------SGP 186 (330)
Q Consensus 133 ------~~~-~~~-~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~---~~~~~~---------------~~~ 186 (330)
... +.. .......++|+|+++.++++-...+.|+.++.......+ ..+.+. -..
T Consensus 294 ~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~ 373 (496)
T 3kya_A 294 KNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNN 373 (496)
T ss_dssp GGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSS
T ss_pred cccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCC
Confidence 112 221 234568999999998656666677889987654311111 111111 112
Q ss_pred eE-EEEEc-------CCCCEEEEEecCCcEEEEeCCCCccccceec------------------------cccceEEEEE
Q psy6213 187 IF-ACDWH-------PEHAWLATASRDKTIKVWDLSIKPSLEYSIN------------------------TIASVSRIKW 234 (330)
Q Consensus 187 i~-~~~~~-------~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------------------------~~~~v~~~~~ 234 (330)
.. .+... +++.++++-...+.|+.++. ++ .+..... .-.....+++
T Consensus 374 P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~-~G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIav 451 (496)
T 3kya_A 374 PCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTP-EG-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVY 451 (496)
T ss_dssp EEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECT-TC-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEE
T ss_pred CeEEEEEccccccccCCCeEEEEECCCCEEEEEeC-CC-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEE
Confidence 34 44554 45677777677888999984 33 2211111 1134778999
Q ss_pred cCC-CCeEEEEeecccCCeEEEEEccCCCc
Q psy6213 235 RPQ-RKFHLASCSLVVDSSVNVWDIRRPYI 263 (330)
Q Consensus 235 ~~~-~~~l~~~~~~~~~~~i~i~d~~~~~~ 263 (330)
+++ +. |+++-. .+..|+.+++.....
T Consensus 452 d~~~g~-lyVaD~--~N~rIrki~~~~~~~ 478 (496)
T 3kya_A 452 DDVKEM-FYVHDQ--VGHTIRTISMEQEEN 478 (496)
T ss_dssp ETTTTE-EEEEET--TTTEEEEEEECCCC-
T ss_pred ECCCCE-EEEEeC--CCCEEEEEECCCCcc
Confidence 997 55 566655 588999999876543
No 285
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.76 E-value=1e-05 Score=71.31 Aligned_cols=260 Identities=10% Similarity=0.006 Sum_probs=143.5
Q ss_pred EEEee-CCC----eeecC-CCeEEEEEcCCcceeeeeceeeccccccccceee-eeecccCCcEEEEEc------CCCcE
Q psy6213 10 HGLKA-DNG----LAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCND-VAWSCIEENHIATGA------TNGAV 76 (330)
Q Consensus 10 ~~~s~-~~~----~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~l~~~~------~dg~i 76 (330)
++++| +++ .++.. |+.+.-+|.++|+..-......... ...+.+ .... + ..+++++ .+|.|
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~---~~~~~ssP~v~--~-g~V~vg~~g~e~g~~g~v 184 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDIKV---GSTLTIAPYVV--K-DKVIIGSSGAELGVRGYL 184 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCGGG---TCBCCSCCEEE--T-TEEEECCBCGGGTCCCEE
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCCCc---cceeecCCEEE--C-CEEEEEecccccCCCCeE
Confidence 45543 444 54555 9999999999998765544332110 001111 1111 3 3455554 37899
Q ss_pred EEEECCCCCCCceeEEecccccc-------------------------------------e-eEEEEEecCCCEEEEEec
Q psy6213 77 VVWNLGQISRSKQERVFNDHKRT-------------------------------------V-NKVSFHYVESNWLISGSQ 118 (330)
Q Consensus 77 ~iw~~~~~~~~~~~~~~~~~~~~-------------------------------------i-~~i~~~~~~~~~l~~~~~ 118 (330)
+-+|..+ ++.+-.+...... + ..+++.+ ...+++.+..
T Consensus 185 ~A~D~~T---G~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~-~~g~vy~g~g 260 (599)
T 1w6s_A 185 TAYDVKT---GEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDP-GTNLIYFGTG 260 (599)
T ss_dssp EEEETTT---CCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEET-TTTEEEEECC
T ss_pred EEEECCC---CcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeC-CCCEEEEeCC
Confidence 9999988 4444333221100 0 1345665 5667776665
Q ss_pred C----------------CcEEEEEeecCceeeeeecCC----------CCeEEEEEc-CCCC--cEEEEEecCCcEEEEe
Q psy6213 119 D----------------GTMRLFDIRCQESTKIFHSNT----------ESVRDVEFN-PHSP--YAFASVSENGTIQQWD 169 (330)
Q Consensus 119 d----------------~~i~i~d~~~~~~~~~~~~~~----------~~v~~~~~~-~~~~--~~~~~~~~dg~i~i~d 169 (330)
+ +.|..+|.++++.+-.++... .++. +... .+++ .+++.++.+|.++++|
T Consensus 261 ~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD 339 (599)
T 1w6s_A 261 NPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLD 339 (599)
T ss_dssp CCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEE
T ss_pred CCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEE
Confidence 4 379999999999887766422 1221 2222 4552 3677788999999999
Q ss_pred cCCCccceeeeccC-------------CCCe--------------------------EEEEEcCCCCEEEEEe-------
Q psy6213 170 VRRPEKCFYQFTAH-------------SGPI--------------------------FACDWHPEHAWLATAS------- 203 (330)
Q Consensus 170 ~~~~~~~~~~~~~~-------------~~~i--------------------------~~~~~~~~~~~l~~~~------- 203 (330)
.+++ +.+...... ..++ ..++++|+..++++..
T Consensus 340 ~~tG-~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~ 418 (599)
T 1w6s_A 340 RTDG-ALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDW 418 (599)
T ss_dssp TTTC-CEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEE
T ss_pred CCCC-CEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceee
Confidence 9884 333322110 0011 2466777766655432
Q ss_pred --------------------------------cCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCC
Q psy6213 204 --------------------------------RDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDS 251 (330)
Q Consensus 204 --------------------------------~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~ 251 (330)
.+|.+.-||+.+++...... ...+...-.....+..+++ ++ .|+
T Consensus 419 ~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~-~~~~~~~g~~~tagg~vf~-gt--~dg 494 (599)
T 1w6s_A 419 EPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKM-ERFAVWGGTMATAGDLVFY-GT--LDG 494 (599)
T ss_dssp EECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEE-ESSCCCSBCEEETTTEEEE-EC--TTS
T ss_pred ecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEec-CCCCccCcceEecCCEEEE-EC--CCC
Confidence 34678888888875433322 1111111111223444444 44 599
Q ss_pred eEEEEEccCCCccceEeecCCC-CeEEEEEecCCCE
Q psy6213 252 SVNVWDIRRPYIPLASFTEHKD-VVSGLAWRGDPQL 286 (330)
Q Consensus 252 ~i~i~d~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~ 286 (330)
.++.||.++++. +-.++.... ...-+.+..+|+.
T Consensus 495 ~l~A~D~~tG~~-lW~~~l~~g~~~~P~~y~~~G~q 529 (599)
T 1w6s_A 495 YLKARDSDTGDL-LWKFKIPSGAIGYPMTYTHKGTQ 529 (599)
T ss_dssp EEEEEETTTCCE-EEEEECSSCCCSCCEEEEETTEE
T ss_pred eEEEEECCCCCE-EEEeeCCCCcEeccEEEEeCCEE
Confidence 999999999987 544443222 1122455567763
No 286
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.72 E-value=6.1e-05 Score=61.39 Aligned_cols=274 Identities=7% Similarity=0.004 Sum_probs=145.4
Q ss_pred ccceEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCC
Q psy6213 5 SPVHKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQ 83 (330)
Q Consensus 5 ~~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 83 (330)
..+.++.|.+++..+++| .|.| +...+.++--........ .....+.++.|.+ +..+++ +..|.|.. ..+.
T Consensus 36 ~~~~~v~~~~~~~~~~~G~~g~i-~~s~DgG~tW~~~~~~~~---~~~~~~~~i~~~~--~~~~~~-g~~g~i~~-S~Dg 107 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLVGVNATL-METRDGGQTWEPRTLVLD---HSDYRFNSVSFQG--NEGWIV-GEPPIMLH-TTDG 107 (327)
T ss_dssp SCEEEEEESSSSCEEEEETTTEE-EEESSTTSSCEECCCCCS---CCCCEEEEEEEET--TEEEEE-EETTEEEE-ESST
T ss_pred CcEEEEEECCCCcEEEEcCCCeE-EEeCCCCCCCeECCCCCC---CCCccEEEEEecC--CeEEEE-ECCCeEEE-ECCC
Confidence 468899998777776677 7765 333444432222211110 0122357888875 444444 45564433 2332
Q ss_pred CCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeee-eecCCCCeEEEEEcCCCCcEEEEEecC
Q psy6213 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKI-FHSNTESVRDVEFNPHSPYAFASVSEN 162 (330)
Q Consensus 84 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~d 162 (330)
....+.......+...+..+.+.+ ++..++++ .++.|..- .+.++.-.. .......+..+++.|++. +++.+ .+
T Consensus 108 G~tW~~~~~~~~~~~~~~~i~~~~-~~~~~~~~-~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~~-~~~~g-~~ 182 (327)
T 2xbg_A 108 GQSWSQIPLDPKLPGSPRLIKALG-NGSAEMIT-NVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSGE-YVAVS-SR 182 (327)
T ss_dssp TSSCEECCCCTTCSSCEEEEEEEE-TTEEEEEE-TTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTSC-EEEEE-TT
T ss_pred CCCceECccccCCCCCeEEEEEEC-CCCEEEEe-CCccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCCc-EEEEE-CC
Confidence 222222221112334567787775 55555554 46654321 122332222 223445788999999876 45544 45
Q ss_pred CcEEE-Eec-CCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcc---ccce-eccccceEEEEEcC
Q psy6213 163 GTIQQ-WDV-RRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPS---LEYS-INTIASVSRIKWRP 236 (330)
Q Consensus 163 g~i~i-~d~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~---~~~~-~~~~~~v~~~~~~~ 236 (330)
|.+.. .|- ...-+.+ -......+..+.+.+++..+ ..+.+|.+++.+...++. .... ......+..+.+.+
T Consensus 183 G~~~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~ 259 (327)
T 2xbg_A 183 GSFYSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDGRLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRT 259 (327)
T ss_dssp SSEEEEECTTCSSCEEE--ECCSSSCEEEEEECTTSCEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESS
T ss_pred CcEEEEeCCCCCceeEC--CCCCCCccceeEECCCCCEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecC
Confidence 55444 342 1111111 12345678899999988755 455678887764222211 1111 11224588899998
Q ss_pred CCCeEEEEeecccCCeEEEEEccCCCccceEee---cCCCCeEEEEEecCCCEEEEeecCCeEeeeec
Q psy6213 237 QRKFHLASCSLVVDSSVNVWDIRRPYIPLASFT---EHKDVVSGLAWRGDPQLFIASSRVSIIPRAKN 301 (330)
Q Consensus 237 ~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~ 301 (330)
++.. ++.+. ++.+ .+....++. -..+. .....+.++.|.+++ .+++++.+|.|..+..
T Consensus 260 ~~~~-~~~g~---~g~i-~~S~DgG~t-W~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 260 PNEV-WLAGG---AGAL-LCSQDGGQT-WQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRYVT 320 (327)
T ss_dssp SSCE-EEEES---TTCE-EEESSTTSS-CEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEECC
T ss_pred CCEE-EEEeC---CCeE-EEeCCCCcc-cEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEEcC
Confidence 8774 66554 7766 344444433 33332 123568889997655 4667778998776643
No 287
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.71 E-value=8.6e-05 Score=65.96 Aligned_cols=225 Identities=5% Similarity=-0.035 Sum_probs=144.9
Q ss_pred cEEEEEcCCCcEEEEECCCCCCCceeEEec-ccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCe
Q psy6213 65 NHIATGATNGAVVVWNLGQISRSKQERVFN-DHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV 143 (330)
Q Consensus 65 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~-~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v 143 (330)
.+|+.+ ..+.|+..+++.. .....+. ..-.....++|.+.++.++++-..++.|+.++++.......+.......
T Consensus 7 ~~Ll~s-~~~~I~~i~l~~~---~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P 82 (628)
T 4a0p_A 7 AFLLFS-RRADIRRISLETN---NNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYP 82 (628)
T ss_dssp CEEEEE-ETTEEEEEESSCT---TCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred cEEEEE-eCCcEEEEECCCC---CcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCc
Confidence 344444 4567999999762 2222222 1234678999998556666666677899999887554443343333457
Q ss_pred EEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEe--cCCcEEEEeCCCCccccc
Q psy6213 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS--RDKTIKVWDLSIKPSLEY 221 (330)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~ 221 (330)
..+++.+.+..++++-...+.|.+.++.... ........-.....+++.|....|+... ..+.|...++..... ..
T Consensus 83 ~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~-~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-~~ 160 (628)
T 4a0p_A 83 EGMAVDWLGKNLYWADTGTNRIEVSKLDGQH-RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-TT 160 (628)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSTT-CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EE
T ss_pred ceEEEEeCCCEEEEEECCCCEEEEEecCCCc-EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-EE
Confidence 7899988777677776777889999987532 2222223445678999999655555554 256788888766533 22
Q ss_pred eeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeee
Q psy6213 222 SINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAK 300 (330)
Q Consensus 222 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~ 300 (330)
..........+++++++..|+.+-. ..+.|..+|+..... ..+........++++.. +.+.++-...+.|...+
T Consensus 161 l~~~~~~P~GlalD~~~~~LY~aD~--~~~~I~~~d~dG~~~--~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~d 234 (628)
T 4a0p_A 161 LVPNVGRANGLTIDYAKRRLYWTDL--DTNLIESSNMLGLNR--EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERAN 234 (628)
T ss_dssp EECSCSSEEEEEEETTTTEEEEEET--TTTEEEEEETTSCSC--EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred EECCCCCcceEEEccccCEEEEEEC--CCCEEEEEcCCCCce--EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEE
Confidence 2334567889999998887788776 689999999976543 33333334566888765 44444444466776665
No 288
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.69 E-value=2.7e-05 Score=68.58 Aligned_cols=163 Identities=13% Similarity=0.116 Sum_probs=93.1
Q ss_pred CcEEEEEeecCceeeeeec--CC--------CCeEEEEEc-CCCC--cEEEEEecCCcEEEEecCCCccceeeeccCC--
Q psy6213 120 GTMRLFDIRCQESTKIFHS--NT--------ESVRDVEFN-PHSP--YAFASVSENGTIQQWDVRRPEKCFYQFTAHS-- 184 (330)
Q Consensus 120 ~~i~i~d~~~~~~~~~~~~--~~--------~~v~~~~~~-~~~~--~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~-- 184 (330)
+.|..+|.++++.+-.++. |. .++. +... .+++ .+++.++.+|.++++|.+++ +.+-.+....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG-~~lw~~~~~~~~ 368 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNG-KLQNAFPFVDNI 368 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTC-CEEEEEESSSCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCC-CEecccccccCc
Confidence 5899999999998877753 21 1221 2221 3553 36788999999999999874 3332221110
Q ss_pred -----------CC--------------------------------eEEEEEcCCCCEEEEEe------------------
Q psy6213 185 -----------GP--------------------------------IFACDWHPEHAWLATAS------------------ 203 (330)
Q Consensus 185 -----------~~--------------------------------i~~~~~~~~~~~l~~~~------------------ 203 (330)
.+ -..++++|+..++++..
T Consensus 369 ~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~ 448 (582)
T 1flg_A 369 TWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGS 448 (582)
T ss_dssp CSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTS
T ss_pred cccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCC
Confidence 00 01356677655555433
Q ss_pred ---------------cCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEe
Q psy6213 204 ---------------RDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASF 268 (330)
Q Consensus 204 ---------------~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~ 268 (330)
.+|.|.-||+.+++....... ..+...-.....+..+++ ++ .|+.++.||.++++. +-.+
T Consensus 449 ~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~-~~~~~~g~~~tagglvf~-g~--~dg~l~A~D~~tG~~-lW~~ 523 (582)
T 1flg_A 449 AYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKE-HLPLWAGVLATAGNLVFT-GT--GDGYFKAFDAKSGKE-LWKF 523 (582)
T ss_dssp CCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEE-SSCCCSCCEEETTTEEEE-EC--TTSEEEEEETTTCCE-EEEE
T ss_pred ceeccceeecCCCCCCcceEEEEECCCCCEEEEecC-CCCCcccceEeCCCEEEE-EC--CCCcEEEEECCCCCE-EEEe
Confidence 257899999998855433222 222211111123444444 55 699999999999987 5555
Q ss_pred ecCCCCe-EEEEEecCCCEEEE
Q psy6213 269 TEHKDVV-SGLAWRGDPQLFIA 289 (330)
Q Consensus 269 ~~~~~~v-~~~~~~~~~~~l~s 289 (330)
+...... .-+.|..+|+..++
T Consensus 524 ~~~~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 524 QTGSGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp ECSSCCCSCCEEEEETTEEEEE
T ss_pred cCCCCcccCceEEEECCEEEEE
Confidence 4433211 22566677764433
No 289
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.66 E-value=3.7e-07 Score=82.22 Aligned_cols=220 Identities=13% Similarity=0.010 Sum_probs=128.1
Q ss_pred CCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeec----CceeeeeecCCCCeEEEEE
Q psy6213 73 NGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC----QESTKIFHSNTESVRDVEF 148 (330)
Q Consensus 73 dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~~~v~~~~~ 148 (330)
.+.|+..++.. ......+. ....+..++|.+.++.++++-...+.|+.+++.. ......+.........+++
T Consensus 385 ~~~I~~id~~~---~~~~~~~~-~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glav 460 (699)
T 1n7d_A 385 RHEVRKMTLDR---SEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV 460 (699)
T ss_dssp TTC-CEECTTS---CCEECCSC-CCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEEC
T ss_pred ccceEEEeCCC---Ccceeeec-cCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEE
Confidence 35677777765 22222222 2345678899974444444445567899999875 2222222222234567888
Q ss_pred cCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEec-C-CcEEEEeCCCCccccceeccc
Q psy6213 149 NPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASR-D-KTIKVWDLSIKPSLEYSINTI 226 (330)
Q Consensus 149 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-d-g~i~i~d~~~~~~~~~~~~~~ 226 (330)
.+.+..++++-...+.|.++++.. ......+.........++++|.+.+|+.+.. . +.|..+++.............
T Consensus 461 D~~~g~LY~tD~~~~~I~v~d~dg-~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l 539 (699)
T 1n7d_A 461 DWIHSNIYWTDSVLGTVSVADTKG-VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENI 539 (699)
T ss_dssp CCSSSBCEECCTTTSCEEEEBSSS-CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSC
T ss_pred EeeCCcEEEEeccCCeEEEEecCC-CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCC
Confidence 866665666656678899999875 2222222222345678999996655554442 2 678888776542222222223
Q ss_pred cceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEee--cCCCCeEEEEEecCCCEEEEeecCCeEeeeec
Q psy6213 227 ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFT--EHKDVVSGLAWRGDPQLFIASSRVSIIPRAKN 301 (330)
Q Consensus 227 ~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~ 301 (330)
.....|+|+|++..|+.+-. ..+.|..+++..... ..... .......+|++..+ .++++....+.|..+..
T Consensus 540 ~~PnGlavd~~~~~LY~aD~--~~~~I~~~d~dG~~~-~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~ 612 (699)
T 1n7d_A 540 QWPNGITLDLLSGRLYWVDS--KLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANR 612 (699)
T ss_dssp SSCCCEEECTTTCCEEEEET--TTTEEEEECSSSSCC-EEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEET
T ss_pred CCccEEEEeccCCEEEEEec--CCCeEEEEccCCCce-EEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEc
Confidence 55778999998877777776 688999999875432 22221 11123455666554 45555556677877754
No 290
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.65 E-value=2.2e-06 Score=76.91 Aligned_cols=225 Identities=7% Similarity=0.004 Sum_probs=121.8
Q ss_pred eEEEEeeCCCe-eecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEc-CC-----CcEEE
Q psy6213 8 HKHGLKADNGL-AQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGA-TN-----GAVVV 78 (330)
Q Consensus 8 ~~~~~s~~~~~-~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-~d-----g~i~i 78 (330)
.++++.++|++ ++.| ++.+.+||..+++.......+.... -.+++..+ ++++++.|+ .+ ..+.+
T Consensus 246 ~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~------~~s~~~~~-dg~iyv~GG~~~~~~~~~~~e~ 318 (656)
T 1k3i_A 246 PGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARG------YQSSATMS-DGRVFTIGGSWSGGVFEKNGEV 318 (656)
T ss_dssp CEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCS------SCEEEECT-TSCEEEECCCCCSSSCCCCEEE
T ss_pred ccccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCcccc------ccceEEec-CCeEEEEeCcccCCcccccceE
Confidence 34677889999 5555 6689999998876554433222111 13445556 788888888 34 46899
Q ss_pred EECCCCCCCceeEEecc-----cccceeEEEEEecCCCEEEEEecCC---------cEEEEEeecCceeeeeecCC----
Q psy6213 79 WNLGQISRSKQERVFND-----HKRTVNKVSFHYVESNWLISGSQDG---------TMRLFDIRCQESTKIFHSNT---- 140 (330)
Q Consensus 79 w~~~~~~~~~~~~~~~~-----~~~~i~~i~~~~~~~~~l~~~~~d~---------~i~i~d~~~~~~~~~~~~~~---- 140 (330)
||..+ .+- ..+.. ....-....+.. ++..++.|+.+| .+..||..+...........
T Consensus 319 yd~~t---~~W-~~~~~~~~~p~~~~~~~~~~~~-~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~ 393 (656)
T 1k3i_A 319 YSPSS---KTW-TSLPNAKVNPMLTADKQGLYRS-DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRG 393 (656)
T ss_dssp EETTT---TEE-EEETTSCSGGGCCCCTTGGGTT-TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTE
T ss_pred eCCCC---Ccc-eeCCCccccccccccccceeec-CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccc
Confidence 99876 221 11110 000000001111 445555555443 56788877665332222111
Q ss_pred -----CCeEEEEEcCCCCcEEEEEecCC-----------cEEEEecCCCccceeee--ccC-CCCeEEEEEcCCCCEEEE
Q psy6213 141 -----ESVRDVEFNPHSPYAFASVSENG-----------TIQQWDVRRPEKCFYQF--TAH-SGPIFACDWHPEHAWLAT 201 (330)
Q Consensus 141 -----~~v~~~~~~~~~~~~~~~~~~dg-----------~i~i~d~~~~~~~~~~~--~~~-~~~i~~~~~~~~~~~l~~ 201 (330)
..-.++.|...+..+++.|+.++ .+.+||..+..- .... ... ...-.+....|++++++.
T Consensus 394 ~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W-~~~~~~~mp~~R~~~~~~~l~~g~i~v~ 472 (656)
T 1k3i_A 394 VAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPN-TVFASNGLYFARTFHTSVVLPDGSTFIT 472 (656)
T ss_dssp ECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCE-EEECTTCCSSCCBSCEEEECTTSCEEEE
T ss_pred cCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCe-eEEccCCCCCCcccCCeEECCCCCEEEE
Confidence 12244455443444788887543 577888776321 1111 111 122335566789999999
Q ss_pred EecC-----------CcEEEEeCCCCcccc--ceeccccceEEEEEcCCCCeEEEEe
Q psy6213 202 ASRD-----------KTIKVWDLSIKPSLE--YSINTIASVSRIKWRPQRKFHLASC 245 (330)
Q Consensus 202 ~~~d-----------g~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~~ 245 (330)
|+.+ ..+.+||..+.+-.. .............+.|+++.+++++
T Consensus 473 GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG 529 (656)
T 1k3i_A 473 GGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGG 529 (656)
T ss_dssp CCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEEC
T ss_pred CCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCC
Confidence 9864 468999987653111 1111122334556779999655555
No 291
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.63 E-value=3.5e-05 Score=67.92 Aligned_cols=277 Identities=12% Similarity=0.016 Sum_probs=150.9
Q ss_pred CCCeeecC-CCeEEEEEcCCcceeeeeceeecccccc--ccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeE
Q psy6213 15 DNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINL--NFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQER 91 (330)
Q Consensus 15 ~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 91 (330)
++..++++ ++.|.-+|.++|+.+-.+.......... ......++. .+..++.++.++.|.-+|..+ ++.+-
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~---~~~~v~~~t~dg~l~AlD~~T---G~~~W 141 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI---YGDKVFFGTLDASVVALNKNT---GKVVW 141 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE---ETTEEEEEETTTEEEEEESSS---CCEEE
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE---ECCEEEEEeCCCEEEEEECCC---CCEEe
Confidence 45553333 4558889999988765554432211000 000011222 356777888899999999988 55444
Q ss_pred Eecccc--c--cee-EEEEEec--CCC-EEEEEe------cCCcEEEEEeecCceeeeeecCCCC---------------
Q psy6213 92 VFNDHK--R--TVN-KVSFHYV--ESN-WLISGS------QDGTMRLFDIRCQESTKIFHSNTES--------------- 142 (330)
Q Consensus 92 ~~~~~~--~--~i~-~i~~~~~--~~~-~l~~~~------~d~~i~i~d~~~~~~~~~~~~~~~~--------------- 142 (330)
...... . .+. .-..... +++ .+++++ .++.|+.+|.++++.+-........
T Consensus 142 ~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~~ 221 (582)
T 1flg_A 142 KKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGDV 221 (582)
T ss_dssp EEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSCT
T ss_pred eecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCccccccccc
Confidence 332211 0 111 1112211 122 566654 3789999999999877654321100
Q ss_pred --------------------------eEEEEEcCCCCcEEEEEec--------------------C----CcEEEEecCC
Q psy6213 143 --------------------------VRDVEFNPHSPYAFASVSE--------------------N----GTIQQWDVRR 172 (330)
Q Consensus 143 --------------------------v~~~~~~~~~~~~~~~~~~--------------------d----g~i~i~d~~~ 172 (330)
-..+++.|+.. +++.+.. | +.|..+|.++
T Consensus 222 g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g-~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~T 300 (582)
T 1flg_A 222 KAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETN-TIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSS 300 (582)
T ss_dssp TCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTT-EEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTT
T ss_pred ccccCCCccccccccccccccCCccccCCceEcCCCC-EEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCC
Confidence 01345666666 4555542 2 5799999998
Q ss_pred Cccceeeec--cCCC-------CeEEEEEc-CCCC---EEEEEecCCcEEEEeCCCCccccceeccc-------------
Q psy6213 173 PEKCFYQFT--AHSG-------PIFACDWH-PEHA---WLATASRDKTIKVWDLSIKPSLEYSINTI------------- 226 (330)
Q Consensus 173 ~~~~~~~~~--~~~~-------~i~~~~~~-~~~~---~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------------- 226 (330)
+ +..-.++ .|.. ...-+... .+|+ .++.++.+|.++++|..+++.+.......
T Consensus 301 G-~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g 379 (582)
T 1flg_A 301 G-EVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTG 379 (582)
T ss_dssp C-CEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTC
T ss_pred C-CEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCC
Confidence 4 4443332 2221 11112221 4663 78889999999999998885432211100
Q ss_pred cc--------------------------------eEEEEEcCCCCeEEEEee----------------------------
Q psy6213 227 AS--------------------------------VSRIKWRPQRKFHLASCS---------------------------- 246 (330)
Q Consensus 227 ~~--------------------------------v~~~~~~~~~~~l~~~~~---------------------------- 246 (330)
.+ -..++++|+...+++...
T Consensus 380 ~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p 459 (582)
T 1flg_A 380 RPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKR 459 (582)
T ss_dssp CEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred CEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecC
Confidence 00 013466776554444321
Q ss_pred --cccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeec
Q psy6213 247 --LVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKN 301 (330)
Q Consensus 247 --~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~ 301 (330)
...+|.|..||+.+++. +-..... .++..-.....+.+++.++.||.++.|+.
T Consensus 460 ~~~~~~G~l~A~D~~tG~~-~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~ 514 (582)
T 1flg_A 460 MYDDHVGSLRAMDPVSGKV-VWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDA 514 (582)
T ss_dssp SCSSCSEEEEEECTTTCCE-EEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEET
T ss_pred CCCCCcceEEEEECCCCCE-EEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEEC
Confidence 00258899999999875 3333222 22222222224667888999999999974
No 292
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.59 E-value=6.2e-05 Score=66.79 Aligned_cols=227 Identities=9% Similarity=0.014 Sum_probs=128.5
Q ss_pred CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeE
Q psy6213 23 RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNK 102 (330)
Q Consensus 23 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~ 102 (330)
.+.|+..+++............ +. ....++|++.++.++.+-...+.|..++++... .....+...-.....
T Consensus 17 ~~~I~~i~~~~~~~~~~~~~~~-----~~-~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~--~~~~v~~~~~~~P~G 88 (619)
T 3s94_A 17 RRDLRLVDATNGKENATIVVGG-----LE-DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTE--SVQNVVVSGLLSPDG 88 (619)
T ss_dssp SSBEEEECCC---------CBC-----CS-CEEEEEEETTTTEEEEEETTTTEEEEEEC-------CEEEECSSCSCEEE
T ss_pred cccEEEEeCCCCcceEEEEEcC-----CC-ceEEEEEEeCCCEEEEEECCCCeEEEEEccCCC--ceEEEEeCCCCCcCe
Confidence 6778888877542111111111 11 137899998344444454556788888886521 112223333356788
Q ss_pred EEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEe-cCCcEEEEecCCCccceeeec
Q psy6213 103 VSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVS-ENGTIQQWDVRRPEKCFYQFT 181 (330)
Q Consensus 103 i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~dg~i~i~d~~~~~~~~~~~~ 181 (330)
+++.+.+++++++-...+.|.+.+++...........-.....+++.|.+.+++++-- ..+.|...++.. ........
T Consensus 89 lAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG-~~~~~l~~ 167 (619)
T 3s94_A 89 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG-SSRFIIIN 167 (619)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTS-CSCEEEEC
T ss_pred EEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCC-CceEEEEe
Confidence 9998755666666667789999998754333333234456778999998775555542 245677777663 22222222
Q ss_pred cCCCCeEEEEEcCCCCEEEEE-ecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccC
Q psy6213 182 AHSGPIFACDWHPEHAWLATA-SRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260 (330)
Q Consensus 182 ~~~~~i~~~~~~~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~ 260 (330)
..-...+.+++++++..|..+ ...+.|..+|+..................+++..+ .++.+-. ..+.|...|..+
T Consensus 168 ~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~--~~~~V~~~d~~t 243 (619)
T 3s94_A 168 SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDW--STHSILACNKYT 243 (619)
T ss_dssp SSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS--EEEEECT--TTCSEEEEESSS
T ss_pred CCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecC--CCCEEEEEECCC
Confidence 234567899999876555544 45678999998765332222112233456677655 4566655 578888888766
Q ss_pred CC
Q psy6213 261 PY 262 (330)
Q Consensus 261 ~~ 262 (330)
++
T Consensus 244 g~ 245 (619)
T 3s94_A 244 GE 245 (619)
T ss_dssp CC
T ss_pred Cc
Confidence 54
No 293
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.57 E-value=4e-05 Score=63.13 Aligned_cols=232 Identities=9% Similarity=0.071 Sum_probs=120.6
Q ss_pred cceEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccC---CcEEEEEcC-C-----Cc
Q psy6213 6 PVHKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIE---ENHIATGAT-N-----GA 75 (330)
Q Consensus 6 ~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~-d-----g~ 75 (330)
.-..++|.|||+++++. +|.|.+++ +++........ ....-......++|+| + +..|+++.. . +.
T Consensus 32 ~P~~ia~~pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~--v~~~g~~~p~gia~~p-df~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERPGRIRLFR--EGRLSTYAELS--VYHRGESGLLGLALHP-RFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEE--TTEEEEEEECC--CCCSTTCSEEEEEECT-TTTTSCEEEEEEEECTTSSEEE
T ss_pred CceEEEEcCCCeEEEEeCCCeEEEEE--CCCccEeecce--EeecCCCCceeEEECC-CCCCCCEEEEEEecCCCCCccE
Confidence 45789999999987777 99999998 44322211111 0000112358899999 5 444444432 2 56
Q ss_pred EEEEECCCCCC--Cce-eEEec---ccccceeEEEEEecCCCEEEEEecC-------------CcEEEEEeecC------
Q psy6213 76 VVVWNLGQISR--SKQ-ERVFN---DHKRTVNKVSFHYVESNWLISGSQD-------------GTMRLFDIRCQ------ 130 (330)
Q Consensus 76 i~iw~~~~~~~--~~~-~~~~~---~~~~~i~~i~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~------ 130 (330)
|..++...... .+. ...+. ........++|.| ++.+.++.+.. |.|.-++....
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~np 185 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGP-DGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNP 185 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECT-TSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECC-CCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCc
Confidence 77787764110 111 11122 1112346899998 77766664321 45555555420
Q ss_pred ------ceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCc--------EEEEecCCC---------------ccceeeec
Q psy6213 131 ------ESTKIFHSNTESVRDVEFNPHSPYAFASVSENGT--------IQQWDVRRP---------------EKCFYQFT 181 (330)
Q Consensus 131 ------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~--------i~i~d~~~~---------------~~~~~~~~ 181 (330)
.....+...-.....++|+|+...++++-..... |.+...... ..+...+.
T Consensus 186 f~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~ 265 (352)
T 2ism_A 186 FLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP 265 (352)
T ss_dssp TTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred ccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC
Confidence 0111222122335678999943334544332222 333321110 01222222
Q ss_pred cCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcc------ccceeccccceEEEEEcCCCCeEEEEe
Q psy6213 182 AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPS------LEYSINTIASVSRIKWRPQRKFHLASC 245 (330)
Q Consensus 182 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~~~~~~v~~~~~~~~~~~l~~~~ 245 (330)
+......++| .+|.++++.-..+.|...++..... ..........+..+++.|||..+++..
T Consensus 266 -~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 266 -QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp -TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred -CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 2234567777 4677776666677788887764421 111222345788999999997544443
No 294
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.55 E-value=1.1e-06 Score=79.13 Aligned_cols=202 Identities=10% Similarity=0.027 Sum_probs=117.5
Q ss_pred cceEEEEeeCCCe-eecC--CCeEEEEEcCCc----ceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEE
Q psy6213 6 PVHKHGLKADNGL-AQPS--RNVFKIFLIKDT----EFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVV 78 (330)
Q Consensus 6 ~v~~~~~s~~~~~-~~~g--d~~i~iw~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~i 78 (330)
.+.+++|.+.+.. ..+. .+.|+.+++... ........ .+ .....+++.+..++++++-...+.|.+
T Consensus 407 ~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~------~~-~~P~glavD~~~g~LY~tD~~~~~I~v 479 (699)
T 1n7d_A 407 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR------DI-QAPDGLAVDWIHSNIYWTDSVLGTVSV 479 (699)
T ss_dssp TCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCS------CC---CCCEECCCSSSBCEECCTTTSCEEE
T ss_pred ceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeC------CC-CCcceEEEEeeCCcEEEEeccCCeEEE
Confidence 4567888886655 4443 778888887751 11111100 01 113567777535566666566788999
Q ss_pred EECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecC-CcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEE
Q psy6213 79 WNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQD-GTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFA 157 (330)
Q Consensus 79 w~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d-~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 157 (330)
+++.. ......+.........+++.|.++.++++-... +.|..+++............-.....|+|+|++.++++
T Consensus 480 ~d~dg---~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~ 556 (699)
T 1n7d_A 480 ADTKG---VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYW 556 (699)
T ss_dssp EBSSS---CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEE
T ss_pred EecCC---CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEE
Confidence 99875 222222222234567889988445555444333 68888887643222222222345678999998877777
Q ss_pred EEecCCcEEEEecCCCccceeeec--cCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccc
Q psy6213 158 SVSENGTIQQWDVRRPEKCFYQFT--AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSL 219 (330)
Q Consensus 158 ~~~~dg~i~i~d~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 219 (330)
+-...+.|..+|+..... ...+. ........|++..+ .++++....+.|..+|..+++..
T Consensus 557 aD~~~~~I~~~d~dG~~~-~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~ 618 (699)
T 1n7d_A 557 VDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDV 618 (699)
T ss_dssp EETTTTEEEEECSSSSCC-EEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEE
T ss_pred EecCCCeEEEEccCCCce-EEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCce
Confidence 777778899999874221 11111 11233456666544 45556666788999998766443
No 295
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.55 E-value=0.0001 Score=59.52 Aligned_cols=196 Identities=15% Similarity=0.232 Sum_probs=123.4
Q ss_pred CcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEec---CCC---EEEEEe-c--CCcEEEEEee-cCcee
Q psy6213 64 ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYV---ESN---WLISGS-Q--DGTMRLFDIR-CQEST 133 (330)
Q Consensus 64 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~---~~~---~l~~~~-~--d~~i~i~d~~-~~~~~ 133 (330)
..+++.....+-+.+||+ + ++.+..+.. +.++.+..-|. +++ ++++.. . +++|.+|++. ....+
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~---G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l 113 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-D---GKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTL 113 (355)
T ss_dssp GCEEEEEETTTEEEEEET-T---SCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCE
T ss_pred ccEEEEEcCCCCEEEEcC-C---CcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCce
Confidence 445666667788999999 4 577776653 56777777651 122 233333 3 5789999874 12234
Q ss_pred eeeec------CC-CCeEEEEE--cCC-CCcEEEEEecCCcEEEEecCCC------ccceeeeccCCCCeEEEEEcCCCC
Q psy6213 134 KIFHS------NT-ESVRDVEF--NPH-SPYAFASVSENGTIQQWDVRRP------EKCFYQFTAHSGPIFACDWHPEHA 197 (330)
Q Consensus 134 ~~~~~------~~-~~v~~~~~--~~~-~~~~~~~~~~dg~i~i~d~~~~------~~~~~~~~~~~~~i~~~~~~~~~~ 197 (330)
..+.. .. ..+..+++ +|. +...+++...+|.+..|++... .+.++++.. .+.+-.+...+...
T Consensus 114 ~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g 192 (355)
T 3amr_A 114 QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYG 192 (355)
T ss_dssp EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTT
T ss_pred eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCC
Confidence 33311 11 45666777 664 4434777788899999988431 234555553 46788999999888
Q ss_pred EEEEEecCCcEEEEeCCCCc----ccccee---ccccceEEEEE--cCCCC-eEEEEeecccCCeEEEEEccCCCccceE
Q psy6213 198 WLATASRDKTIKVWDLSIKP----SLEYSI---NTIASVSRIKW--RPQRK-FHLASCSLVVDSSVNVWDIRRPYIPLAS 267 (330)
Q Consensus 198 ~l~~~~~dg~i~i~d~~~~~----~~~~~~---~~~~~v~~~~~--~~~~~-~l~~~~~~~~~~~i~i~d~~~~~~~~~~ 267 (330)
.|+.+-++.-|..||.+... .+.... .....+..|++ .++++ +|++++. .+++..+||.......+..
T Consensus 193 ~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ--G~~s~~Vydr~~~~~~vg~ 270 (355)
T 3amr_A 193 RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ--GNSSYAIYDRQGKNKYVAD 270 (355)
T ss_dssp EEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG--GGTEEEEEESSTTCCEEEE
T ss_pred eEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC--CCCEEEEEECCCCCcEEEE
Confidence 99999998777777754221 122121 12346788887 55666 7888886 6899999999743333445
Q ss_pred e
Q psy6213 268 F 268 (330)
Q Consensus 268 ~ 268 (330)
+
T Consensus 271 f 271 (355)
T 3amr_A 271 F 271 (355)
T ss_dssp E
T ss_pred E
Confidence 4
No 296
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.53 E-value=4e-05 Score=65.31 Aligned_cols=201 Identities=11% Similarity=0.119 Sum_probs=119.6
Q ss_pred ceeEEEEEec-CCCEEEEEecCCcEEEEEeecCceeeeeecC---CCCeEEEEE-------cCCCCcEEEEEecCCc---
Q psy6213 99 TVNKVSFHYV-ESNWLISGSQDGTMRLFDIRCQESTKIFHSN---TESVRDVEF-------NPHSPYAFASVSENGT--- 164 (330)
Q Consensus 99 ~i~~i~~~~~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~~~v~~~~~-------~~~~~~~~~~~~~dg~--- 164 (330)
....|+|.|. +++++++-...+.|++.|++++......... ......++| ++++.+++++-..++.
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 3568899973 4555555555567889998876655444322 235889999 9999865555444322
Q ss_pred ---EEEEecCCCccce-----eeeccCCCCeEEEEEcC-CCCEEEEEecCCcEEEEeCC-------CCcc----------
Q psy6213 165 ---IQQWDVRRPEKCF-----YQFTAHSGPIFACDWHP-EHAWLATASRDKTIKVWDLS-------IKPS---------- 218 (330)
Q Consensus 165 ---i~i~d~~~~~~~~-----~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~i~d~~-------~~~~---------- 218 (330)
|.+++....+... ..+.. ......++++| ++.++++-..++.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 6677643311211 12222 22446788999 45556666678889999987 4432
Q ss_pred ---ccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccc---eEeecC---C------------CCeE-
Q psy6213 219 ---LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPL---ASFTEH---K------------DVVS- 276 (330)
Q Consensus 219 ---~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~---~~~~~~---~------------~~v~- 276 (330)
.............++|+|+|++++++-. ....|+.++.......+ ..+.+. . ....
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~--~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~ 376 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVI--NNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQ 376 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEET--TTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeC--CCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeE
Confidence 0111222345689999999997666665 58899997765322101 122211 0 1234
Q ss_pred EEEEe-------cCCCEEEEeecCCeEeeeecc
Q psy6213 277 GLAWR-------GDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 277 ~~~~~-------~~~~~l~s~~~dg~i~iw~~~ 302 (330)
.++.. +++.+.++=....+|+.+...
T Consensus 377 gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~ 409 (496)
T 3kya_A 377 GVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPE 409 (496)
T ss_dssp EEEEECTTCCSSCCEEEEEEEGGGTEEEEECTT
T ss_pred EEEEccccccccCCCeEEEEECCCCEEEEEeCC
Confidence 45554 456666666667788887643
No 297
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.52 E-value=7.7e-05 Score=66.17 Aligned_cols=227 Identities=9% Similarity=-0.030 Sum_probs=130.2
Q ss_pred EEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCce-eeeeecCCCCeE
Q psy6213 66 HIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQES-TKIFHSNTESVR 144 (330)
Q Consensus 66 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~v~ 144 (330)
+|+-+. ...|+..++.... .........-.....++|++.++.++++-...+.|..++++.... ...+...-....
T Consensus 11 ~~~~~~-~~~I~~i~~~~~~--~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~ 87 (619)
T 3s94_A 11 LLLYAN-RRDLRLVDATNGK--ENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD 87 (619)
T ss_dssp CEEEEC-SSBEEEECCC-----------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEE
T ss_pred eEEEec-cccEEEEeCCCCc--ceEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcC
Confidence 344333 4678888887521 111222223355788999984455555555567899998875532 223333335688
Q ss_pred EEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEec--CCcEEEEeCCCCccccce
Q psy6213 145 DVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASR--DKTIKVWDLSIKPSLEYS 222 (330)
Q Consensus 145 ~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~ 222 (330)
.+++.+.+..++++-...+.|.+.++... ...............|++.|.+..|+.... .+.|...++.........
T Consensus 88 GlAvD~~~~~ly~~d~~~~~I~v~~~dG~-~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~ 166 (619)
T 3s94_A 88 GLACDWLGEKLYWTDSETNRIEVSNLDGS-LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIII 166 (619)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE
T ss_pred eEEEEecCCEEEEEeCCCCEEEEEECCCC-CEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEE
Confidence 99999977767777777889999998752 222222234456789999997555555543 456777777654332222
Q ss_pred eccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeee
Q psy6213 223 INTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAK 300 (330)
Q Consensus 223 ~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~ 300 (330)
.........+++++++..|+.+-. ..+.|..+|+..... .....+......++++.++ .+..+-...+.|...+
T Consensus 167 ~~~~~~P~Glald~~~~~LY~aD~--~~~~I~~~~~dG~~~-~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d 240 (619)
T 3s94_A 167 NSEIYWPNGLTLDYEEQKLYWADA--KLNFIHKSNLDGTNR-QAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACN 240 (619)
T ss_dssp CSSCSSEEEEEEETTTTEEEEEET--TTCCEEEESSSCCEE-C---------CCCEEESSS-EEEEECTTTCSEEEEE
T ss_pred eCCCCCCcEEEEEccCCEEEEEeC--CCCeEEEecCCCCcc-EEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEE
Confidence 234457889999998877777766 688999999875432 2222211222346666554 3333333445555544
No 298
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.51 E-value=0.00011 Score=58.81 Aligned_cols=197 Identities=9% Similarity=0.127 Sum_probs=122.1
Q ss_pred eeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeE-Eecc----c--ccceeEEEE---EecCCCEEEEEec------
Q psy6213 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQER-VFND----H--KRTVNKVSF---HYVESNWLISGSQ------ 118 (330)
Q Consensus 55 ~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~-~~~~----~--~~~i~~i~~---~~~~~~~l~~~~~------ 118 (330)
.+++|.+.++.++++.-..+.|..|+... ..... .+.. . ...+..+.| .| ++.++++...
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~---~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~-~grL~vv~~~~~af~~ 91 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKT---QSHFNVVIDGASSNGDGEQQMSGLSLLTHDN-SKRLFAVMKNAKSFNF 91 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTT---CCEEEECCTTTCCSSCCSEEEEEEEESSSSS-CCEEEEEEEETTTTCT
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCC---CeEEEEecCCccccCCCcceeeEEEEeccCC-CCcEEEEEcccccccc
Confidence 68899873444444444789999999874 22222 2222 1 124578999 57 5677765432
Q ss_pred -------CCcEEEEEee---cCceeeeeec-------------CCCCeEEEEEcCCCCcEEEEEecC-CcEEEEecCCCc
Q psy6213 119 -------DGTMRLFDIR---CQESTKIFHS-------------NTESVRDVEFNPHSPYAFASVSEN-GTIQQWDVRRPE 174 (330)
Q Consensus 119 -------d~~i~i~d~~---~~~~~~~~~~-------------~~~~v~~~~~~~~~~~~~~~~~~d-g~i~i~d~~~~~ 174 (330)
+..|..||+. +++.+..... .......++..++|+ ..++++.. +.|...+...
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~rV~pdG-- 168 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIARVSADG-- 168 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEEEECTTS--
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEEEEeCCC--
Confidence 5779999998 7776654431 112478999999998 68888888 8877777663
Q ss_pred cceeeec------cCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcccccee---c---cccceEEE-EEcCCCCeE
Q psy6213 175 KCFYQFT------AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI---N---TIASVSRI-KWRPQRKFH 241 (330)
Q Consensus 175 ~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~---~~~~v~~~-~~~~~~~~l 241 (330)
+....+. ......+.|+++|+|+.|++....|.+..+|+.......... + .......+ ..-.+|+.+
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vl 248 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESV 248 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEE
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEE
Confidence 2222111 112246799999999998888779999999998542200111 1 11223443 334567765
Q ss_pred EEEeecccCCeEEEEEccC
Q psy6213 242 LASCSLVVDSSVNVWDIRR 260 (330)
Q Consensus 242 ~~~~~~~~~~~i~i~d~~~ 260 (330)
+++.. ..+.+.+.+-..
T Consensus 249 lV~~~--~~~~~~l~S~Dg 265 (334)
T 2p9w_A 249 LVGAR--APYAISFRSWDN 265 (334)
T ss_dssp EEEEE--TTEEEEEECSST
T ss_pred EEEcC--CCCEEEEECCCC
Confidence 66665 455555555443
No 299
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.40 E-value=0.00042 Score=55.09 Aligned_cols=230 Identities=10% Similarity=0.080 Sum_probs=147.0
Q ss_pred eeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeec-Cceee
Q psy6213 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC-QESTK 134 (330)
Q Consensus 56 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~ 134 (330)
+.-.+| ..+.+|.-. ...+.++|+++ ...++.+.- ...|.-=+|- +.+.|+-.+ +..|+-|++.. ..+.+
T Consensus 71 sAIMnP-~~~ViALra-g~~LQiFnlet---K~klks~~~-~e~VvfWkWi--s~~~L~lVT-~taVyHWs~~~~s~P~k 141 (365)
T 2xzh_A 71 SAIMNP-ASKVIALKA-GKTLQIFNIEM---KSKMKAHTM-TDDVTFWKWI--SLNTVALVT-DNAVYHWSMEGESQPVK 141 (365)
T ss_dssp EEEECS-SSSEEEEEE-TTEEEEEETTT---TEEEEEEEC-SSCEEEEEEC--SSSEEEEEE-SSEEEEEESSTTCCCEE
T ss_pred eeeeCC-CccEEEEec-CCeEEEechHH---hhhhcceec-CCccEEEEec--CCCeEEEEc-CCcEEEEcccCCCCCce
Confidence 344578 778777765 67899999998 555555443 3566666665 567777766 45899999974 34555
Q ss_pred eeecC----CCCeEEEEEcCCCCcEEEEEe------cCCcEEEEecCCCccceeeeccCCCCeEEEEEcCC---CCEEEE
Q psy6213 135 IFHSN----TESVRDVEFNPHSPYAFASVS------ENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE---HAWLAT 201 (330)
Q Consensus 135 ~~~~~----~~~v~~~~~~~~~~~~~~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~ 201 (330)
.+..| ...|..-..+++.++++++|- -.|.+.+|..+. +..+.+++|...-..+....+ .++++.
T Consensus 142 vFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er--~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~f 219 (365)
T 2xzh_A 142 MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCF 219 (365)
T ss_dssp EEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT--TEEEEECCSEEEEEEECCTTCSSCEEEEEE
T ss_pred eeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc--cccceeeeeeeeeEEEecCCCCCCceEEEE
Confidence 55543 356777788899998777764 246788999885 445667777654433333211 123443
Q ss_pred Eec---CCcEEEEeCCCCc---ccc------ceec---cccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccce
Q psy6213 202 ASR---DKTIKVWDLSIKP---SLE------YSIN---TIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266 (330)
Q Consensus 202 ~~~---dg~i~i~d~~~~~---~~~------~~~~---~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~ 266 (330)
+.. .+.+++.++.... ... ...+ ...-..++..++.-..++... .-|.|++||++++.. +.
T Consensus 220 a~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviT---K~G~ihlyDleTgt~-i~ 295 (365)
T 2xzh_A 220 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT---KYGYIHLYDLETGTC-IY 295 (365)
T ss_dssp EEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEE---TTSEEEEEETTTCCE-EE
T ss_pred EEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEe---CCcEEEEEEcccCcE-EE
Confidence 332 2589999985431 100 0111 123455677777766544444 599999999999987 66
Q ss_pred EeecCCCCeEEEEEecCCCEEEEeecCCeEeeee
Q psy6213 267 SFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAK 300 (330)
Q Consensus 267 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~ 300 (330)
.-+-...+|...+-+.+..-++.....|.|.--.
T Consensus 296 ~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~ 329 (365)
T 2xzh_A 296 MNRISGETIFVTAPHEATAGIIGVNRKGQVLSVC 329 (365)
T ss_dssp EEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEE
T ss_pred EeccCCCceEEecccCCCCcEEEEcCCCEEEEEE
Confidence 6666667777666666555566667888776543
No 300
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.38 E-value=8.5e-05 Score=59.46 Aligned_cols=202 Identities=8% Similarity=0.120 Sum_probs=121.3
Q ss_pred cccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeee-eec----CC--CCeEEEEE---cCCCCcEEEEEec--
Q psy6213 94 NDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKI-FHS----NT--ESVRDVEF---NPHSPYAFASVSE-- 161 (330)
Q Consensus 94 ~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~----~~--~~v~~~~~---~~~~~~~~~~~~~-- 161 (330)
.....--.++.|.+.++.++++.-..++|..||...+..... +.. .. ..+..+.| .|++. ++++...
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~~~~~ 87 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVMKNAK 87 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEEEETT
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCc-EEEEEcccc
Confidence 334445668899874444444544789999999875543322 221 11 13578999 68865 5664432
Q ss_pred -----------CCcEEEEecC---CCccceeeec--c-----------CCCCeEEEEEcCCCCEEEEEecC-CcEEEEeC
Q psy6213 162 -----------NGTIQQWDVR---RPEKCFYQFT--A-----------HSGPIFACDWHPEHAWLATASRD-KTIKVWDL 213 (330)
Q Consensus 162 -----------dg~i~i~d~~---~~~~~~~~~~--~-----------~~~~i~~~~~~~~~~~l~~~~~d-g~i~i~d~ 213 (330)
+..|..||+. ++. .+.... . .......++..++|+..++++.- +.|...+.
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~-~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSK-PVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCC-CSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECT
T ss_pred cccccccccCCCCEEEEEcCCcCCCCC-EEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeC
Confidence 5779999998 533 222221 1 11347899999999999998888 88877776
Q ss_pred CCCcccccee-----ccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEee--cC---CCCeEEE-EEec
Q psy6213 214 SIKPSLEYSI-----NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFT--EH---KDVVSGL-AWRG 282 (330)
Q Consensus 214 ~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~--~~---~~~v~~~-~~~~ 282 (330)
.......... ......+.++++|+|..|++..+ .+.|..+|+........... +. -.....| .--.
T Consensus 167 dG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~---~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~ 243 (334)
T 2p9w_A 167 DGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG---PRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPV 243 (334)
T ss_dssp TSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS---SSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEE
T ss_pred CCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC---CCeEEEEcCCCCcceeecccccCCcccccCccccccccc
Confidence 6542221111 11234679999999998777765 89999999985432001111 21 1233443 3333
Q ss_pred CCCE-EEEeecCCeEeeee
Q psy6213 283 DPQL-FIASSRVSIIPRAK 300 (330)
Q Consensus 283 ~~~~-l~s~~~dg~i~iw~ 300 (330)
+|+. |++.+..+.+.+.+
T Consensus 244 ~G~vllV~~~~~~~~~l~S 262 (334)
T 2p9w_A 244 GNESVLVGARAPYAISFRS 262 (334)
T ss_dssp TTEEEEEEEETTEEEEEEC
T ss_pred CCEEEEEEcCCCCEEEEEC
Confidence 7777 45455556555543
No 301
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.36 E-value=0.00053 Score=56.39 Aligned_cols=232 Identities=7% Similarity=-0.014 Sum_probs=121.0
Q ss_pred cceEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccC---CcEEEEEcC----C----
Q psy6213 6 PVHKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIE---ENHIATGAT----N---- 73 (330)
Q Consensus 6 ~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~~~----d---- 73 (330)
....|+|.|||+++++. +|.|++++. +++ ........ ...-......++++| + +..|+++.. +
T Consensus 30 ~P~~ia~~pdG~l~V~e~~g~I~~~d~-~G~-~~~~~~~v--~~~g~~g~~gia~~p-df~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVTERPGRLVLISP-SGK-KLVASFDV--ANVGEAGLLGLALHP-EFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CEEEEEEEETTEEEEEETTTEEEEECS-SCE-EEEEECCC--CCSTTCSEEEEEECT-TTTTSCEEEEEEEEECGGGCEE
T ss_pred CCeEEEEcCCCeEEEEeCCCEEEEEeC-CCc-eEeeccce--eecCCCceeeEEeCC-CCCcCCEEEEEEeccCCCCCcc
Confidence 45789999999987777 999999973 443 21111110 000112358899999 5 444444332 2
Q ss_pred CcEEEEECCCCC-CC---cee-EEec-ccccceeEEEEEecCCCEEEEEec-------------CCcEEEEEeecCc---
Q psy6213 74 GAVVVWNLGQIS-RS---KQE-RVFN-DHKRTVNKVSFHYVESNWLISGSQ-------------DGTMRLFDIRCQE--- 131 (330)
Q Consensus 74 g~i~iw~~~~~~-~~---~~~-~~~~-~~~~~i~~i~~~~~~~~~l~~~~~-------------d~~i~i~d~~~~~--- 131 (330)
+.|..|+..... .. +.+ ..+. ........++|.| ++.++++.+. .|.|.-++....-
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~p-DG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~ 183 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGP-DGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPAD 183 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECT-TSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTT
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECC-CCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCC
Confidence 567777765421 00 111 1122 1112346799998 7777666442 1455555543210
Q ss_pred ----eeeeeecCCCCeEEEEEcC-CCCcEEEEEecCC---cEEEEecCCC---------------ccceeeeccCCCCeE
Q psy6213 132 ----STKIFHSNTESVRDVEFNP-HSPYAFASVSENG---TIQQWDVRRP---------------EKCFYQFTAHSGPIF 188 (330)
Q Consensus 132 ----~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~dg---~i~i~d~~~~---------------~~~~~~~~~~~~~i~ 188 (330)
....+...-.....++|+| ++. ++++-.... .|.+...-.. ..+...+........
T Consensus 184 npf~~~~i~a~G~rnp~Gla~d~~~g~-l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~ 262 (354)
T 3a9g_A 184 NPFPNSPIWSYGHRNPQGIDWHRASGV-MVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPS 262 (354)
T ss_dssp SSSTTCCEEEECCSCCCEEEECTTTCC-EEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEE
T ss_pred CCCCCCcEEEEccCCcceEEEeCCCCC-EEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCc
Confidence 0112222223456799999 554 444432221 2333321110 012222211234577
Q ss_pred EEEEc-------CCCCEEEEEecCCcEEEEeCCCCccc---ccee-ccccceEEEEEcCCCCeEEEE
Q psy6213 189 ACDWH-------PEHAWLATASRDKTIKVWDLSIKPSL---EYSI-NTIASVSRIKWRPQRKFHLAS 244 (330)
Q Consensus 189 ~~~~~-------~~~~~l~~~~~dg~i~i~d~~~~~~~---~~~~-~~~~~v~~~~~~~~~~~l~~~ 244 (330)
.++|. .+|.++++.-..+.|...++...... .... .....+..+++.|||..+++.
T Consensus 263 G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~ 329 (354)
T 3a9g_A 263 GASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILIST 329 (354)
T ss_dssp EEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEE
T ss_pred ceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEE
Confidence 88883 46777777767778888888753221 1111 124578899999999743333
No 302
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.36 E-value=0.00026 Score=57.87 Aligned_cols=196 Identities=10% Similarity=0.117 Sum_probs=116.4
Q ss_pred cceeEEEEEecCCCEEEEE------------ecCCcEEEEEeecCc-eeee--eec-----CCCCeEEEEEcC--CCC-c
Q psy6213 98 RTVNKVSFHYVESNWLISG------------SQDGTMRLFDIRCQE-STKI--FHS-----NTESVRDVEFNP--HSP-Y 154 (330)
Q Consensus 98 ~~i~~i~~~~~~~~~l~~~------------~~d~~i~i~d~~~~~-~~~~--~~~-----~~~~v~~~~~~~--~~~-~ 154 (330)
.....+...| ++..++++ ..+|.|.++|.++.. .... +.+ .......+.+.+ ++. +
T Consensus 50 ~G~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~ 128 (355)
T 3sre_A 50 NGSEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVY 128 (355)
T ss_dssp SCCCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred CCcceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEE
Confidence 3455666665 44444333 168999999987321 1122 222 123566777766 343 3
Q ss_pred EEEEEec--CCcEEEEecCCCccce---eeeccC-CCCeEEEEEcCCCCEEEEEec-----------------CCcEEEE
Q psy6213 155 AFASVSE--NGTIQQWDVRRPEKCF---YQFTAH-SGPIFACDWHPEHAWLATASR-----------------DKTIKVW 211 (330)
Q Consensus 155 ~~~~~~~--dg~i~i~d~~~~~~~~---~~~~~~-~~~i~~~~~~~~~~~l~~~~~-----------------dg~i~i~ 211 (330)
++++-.. +..+.+|++....... ..+.+. -...+.+.+.++|.+.++... .|.+.-+
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~ 208 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 208 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEE
Confidence 4555443 4678888776533322 223221 245789999999987776541 2445555
Q ss_pred eCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCcc--ceEeecCCCCeEEEEEec-CCCEEE
Q psy6213 212 DLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIP--LASFTEHKDVVSGLAWRG-DPQLFI 288 (330)
Q Consensus 212 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~--~~~~~~~~~~v~~~~~~~-~~~~l~ 288 (330)
|. + ........-...+.++|+||++.++++-+ ..+.|..|++...... ...+ ...+..-.++..+ +|++.+
T Consensus 209 d~--~-~~~~~~~~l~~pNGia~spDg~~lYvadt--~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwv 282 (355)
T 3sre_A 209 SP--N-DVRVVAEGFDFANGINISPDGKYVYIAEL--LAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWV 282 (355)
T ss_dssp CT--T-CCEEEEEEESSEEEEEECTTSSEEEEEEG--GGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEE
T ss_pred EC--C-eEEEeecCCcccCcceECCCCCEEEEEeC--CCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEE
Confidence 54 2 22233334456889999999998888877 6899999999743221 1223 2245678899999 598887
Q ss_pred EeecC-CeEeeee
Q psy6213 289 ASSRV-SIIPRAK 300 (330)
Q Consensus 289 s~~~d-g~i~iw~ 300 (330)
++..+ +.|..|+
T Consensus 283 a~~~~g~~v~~~~ 295 (355)
T 3sre_A 283 GCHPNGMRIFFYD 295 (355)
T ss_dssp EEESCHHHHHSCC
T ss_pred EecCCceEEEEEC
Confidence 77644 3444443
No 303
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.34 E-value=0.00068 Score=55.16 Aligned_cols=232 Identities=7% Similarity=0.004 Sum_probs=121.3
Q ss_pred ccceEEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCC
Q psy6213 5 SPVHKHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQ 83 (330)
Q Consensus 5 ~~v~~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 83 (330)
..+.++.|.+ +..+++| .+.|.. ..+.++--....... .+...+..+.+.+ ++..++++. +|.|.. ..+.
T Consensus 80 ~~~~~i~~~~-~~~~~~g~~g~i~~-S~DgG~tW~~~~~~~----~~~~~~~~i~~~~-~~~~~~~~~-~g~v~~-S~Dg 150 (327)
T 2xbg_A 80 YRFNSVSFQG-NEGWIVGEPPIMLH-TTDGGQSWSQIPLDP----KLPGSPRLIKALG-NGSAEMITN-VGAIYR-TKDS 150 (327)
T ss_dssp CEEEEEEEET-TEEEEEEETTEEEE-ESSTTSSCEECCCCT----TCSSCEEEEEEEE-TTEEEEEET-TCCEEE-ESST
T ss_pred ccEEEEEecC-CeEEEEECCCeEEE-ECCCCCCceECcccc----CCCCCeEEEEEEC-CCCEEEEeC-CccEEE-EcCC
Confidence 4678889876 4555567 775433 333343222221110 0111235677665 566666554 554422 1222
Q ss_pred CCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeee-ecCCCCeEEEEEcCCCCcEEEEEecC
Q psy6213 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIF-HSNTESVRDVEFNPHSPYAFASVSEN 162 (330)
Q Consensus 84 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~d 162 (330)
....+. ........+..+.+.| ++.+++.+. +|.+..-+-..++.-..+ ......+..+.+.+++. ++.++.+
T Consensus 151 G~tW~~--~~~~~~~~~~~~~~~~-~~~~~~~g~-~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~--~~~~~~~ 224 (327)
T 2xbg_A 151 GKNWQA--LVQEAIGVMRNLNRSP-SGEYVAVSS-RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGR--LWMIVNG 224 (327)
T ss_dssp TSSEEE--EECSCCCCEEEEEECT-TSCEEEEET-TSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSC--EEEEETT
T ss_pred CCCCEE--eecCCCcceEEEEEcC-CCcEEEEEC-CCcEEEEeCCCCCceeECCCCCCCccceeEECCCCC--EEEEeCC
Confidence 111222 2234456788899987 667666554 555544321112221111 22446788999999886 4455667
Q ss_pred CcEEEEecCCCccceeeec----cCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcccccee---ccccceEEEEEc
Q psy6213 163 GTIQQWDVRRPEKCFYQFT----AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI---NTIASVSRIKWR 235 (330)
Q Consensus 163 g~i~i~d~~~~~~~~~~~~----~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~ 235 (330)
|.+++.+... +.....+. .....+..+.+.+++..++++. +|.+ .+....++.-.... .....+..+.|.
T Consensus 225 G~~~~s~~D~-G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~ 301 (327)
T 2xbg_A 225 GKIAFSDPDN-SENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFF 301 (327)
T ss_dssp TEEEEEETTE-EEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEE
T ss_pred ceEEEecCCC-CCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEE
Confidence 8887764221 22112111 1223588899998877666554 6766 33444342211111 123567788887
Q ss_pred CCCCeEEEEeecccCCeEEEEEc
Q psy6213 236 PQRKFHLASCSLVVDSSVNVWDI 258 (330)
Q Consensus 236 ~~~~~l~~~~~~~~~~~i~i~d~ 258 (330)
+++. +++.+. +|.|.-++-
T Consensus 302 ~~~~-~~~~G~---~G~i~~~~~ 320 (327)
T 2xbg_A 302 SPDQ-GFILGQ---KGILLRYVT 320 (327)
T ss_dssp ETTE-EEEECS---TTEEEEECC
T ss_pred CCCc-eEEEcC---CceEEEEcC
Confidence 6655 466664 888776653
No 304
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.30 E-value=0.00094 Score=54.91 Aligned_cols=224 Identities=8% Similarity=0.053 Sum_probs=119.7
Q ss_pred eeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEec---ccccceeEEEEEec---CCCEEEEEecC-----CcEE
Q psy6213 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFN---DHKRTVNKVSFHYV---ESNWLISGSQD-----GTMR 123 (330)
Q Consensus 55 ~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~---~~~~~i~~i~~~~~---~~~~l~~~~~d-----~~i~ 123 (330)
..++|.| +++++++ ..+|.|.+++ .. .......+. ........++++|+ ++.+.++-... +.|.
T Consensus 34 ~~ia~~p-dG~l~V~-e~~g~I~~i~-~g--~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~ 108 (352)
T 2ism_A 34 WALAFLP-DGGMLIA-ERPGRIRLFR-EG--RLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVV 108 (352)
T ss_dssp EEEEECT-TSCEEEE-ETTTEEEEEE-TT--EEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEE
T ss_pred eEEEEcC-CCeEEEE-eCCCeEEEEE-CC--CccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEE
Confidence 7899999 8875554 5669999998 22 122222221 22356789999983 24444443332 5788
Q ss_pred EEEeecCc-----ee-eeee---cCCCCeEEEEEcCCCCcEEEEEec-------------CCcEEEEecCCCc-------
Q psy6213 124 LFDIRCQE-----ST-KIFH---SNTESVRDVEFNPHSPYAFASVSE-------------NGTIQQWDVRRPE------- 174 (330)
Q Consensus 124 i~d~~~~~-----~~-~~~~---~~~~~v~~~~~~~~~~~~~~~~~~-------------dg~i~i~d~~~~~------- 174 (330)
.++...+. .+ ..+. ........++|.|+|. ++++.+. .|.|..++....-
T Consensus 109 r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~ 187 (352)
T 2ism_A 109 RLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFL 187 (352)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTT
T ss_pred EEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCccc
Confidence 88876431 11 1122 1112346899999996 5655432 2456666654200
Q ss_pred ----cceeee-ccCCCCeEEEEEcC-CCCEEEEEecCCc--------EEEEeCCCCc-----------------ccccee
Q psy6213 175 ----KCFYQF-TAHSGPIFACDWHP-EHAWLATASRDKT--------IKVWDLSIKP-----------------SLEYSI 223 (330)
Q Consensus 175 ----~~~~~~-~~~~~~i~~~~~~~-~~~~l~~~~~dg~--------i~i~d~~~~~-----------------~~~~~~ 223 (330)
.....+ .++ .....++|+| ++.++++-...+. |.+.. .+. ......
T Consensus 188 ~~~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~ 264 (352)
T 2ism_A 188 GRRGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIV--PGGNYGWPRVVGRGNDPRYRDPLYFW 264 (352)
T ss_dssp TCTTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC------CCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEEC
T ss_pred CCCCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEec--cCCcCCCCcccCCCCCCCCcCCeEec
Confidence 001111 122 2357889999 6665555443333 33332 221 011111
Q ss_pred ccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCcc-----ceEeecCCCCeEEEEEecCCCEEEEee
Q psy6213 224 NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIP-----LASFTEHKDVVSGLAWRGDPQLFIASS 291 (330)
Q Consensus 224 ~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~-----~~~~~~~~~~v~~~~~~~~~~~l~s~~ 291 (330)
........++| .+|.. +++.- ..+.|...++...... ...+......+.++++.|||.+.++..
T Consensus 265 ~~~~ap~G~~~-~~G~l-~v~~~--~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~ 333 (352)
T 2ism_A 265 PQGFPPGNLAF-FRGDL-YVAGL--RGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTS 333 (352)
T ss_dssp TTCCCEEEEEE-ETTEE-EEEET--TTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEEC
T ss_pred CCCCCCcceEE-ECCEE-EEEEC--CCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEe
Confidence 22234567777 45654 44443 4778888887644310 112212235789999999998777654
No 305
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.30 E-value=0.00025 Score=57.30 Aligned_cols=188 Identities=9% Similarity=0.126 Sum_probs=116.4
Q ss_pred CCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCC----CCc--EEEEEe-c--CCcEEEEecCCCccceee
Q psy6213 109 ESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPH----SPY--AFASVS-E--NGTIQQWDVRRPEKCFYQ 179 (330)
Q Consensus 109 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~----~~~--~~~~~~-~--dg~i~i~d~~~~~~~~~~ 179 (330)
...+++.....+-+.+||+ +++.+..+.. +.+..+..-|. ++. ++++.. . +++|.+|++......+..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 3455666667788999999 7888888753 56777766663 211 223333 3 578999977422223443
Q ss_pred ecc------CC-CCeEEEEE--cCC-CC-EEEEEecCCcEEEEeCCC---C---ccccceeccccceEEEEEcCCCCeEE
Q psy6213 180 FTA------HS-GPIFACDW--HPE-HA-WLATASRDKTIKVWDLSI---K---PSLEYSINTIASVSRIKWRPQRKFHL 242 (330)
Q Consensus 180 ~~~------~~-~~i~~~~~--~~~-~~-~l~~~~~dg~i~i~d~~~---~---~~~~~~~~~~~~v~~~~~~~~~~~l~ 242 (330)
+.. .. ..+..+++ +|. ++ ++++...+|.+..|++.. + ..+.......+.+..+...+....|+
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Ly 195 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLY 195 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEE
Confidence 321 11 55677887 774 43 688888899999999843 2 12334444567888999999888766
Q ss_pred EEeecccCCeEEEEEccCCC----ccceEee-cC-CCCeEEEEEe--cCCC-EEEEee-cCCeEeeeecc
Q psy6213 243 ASCSLVVDSSVNVWDIRRPY----IPLASFT-EH-KDVVSGLAWR--GDPQ-LFIASS-RVSIIPRAKNI 302 (330)
Q Consensus 243 ~~~~~~~~~~i~i~d~~~~~----~~~~~~~-~~-~~~v~~~~~~--~~~~-~l~s~~-~dg~i~iw~~~ 302 (330)
++- ++..|..++.+... ..+.... ++ ...+.+|+.- ++++ +|++++ .+.++.+|+..
T Consensus 196 v~e---Ed~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 196 IAE---EDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEE---TTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred Eec---ccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 655 46666666644211 1233321 22 2468888884 4555 455554 67789999764
No 306
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.29 E-value=0.001 Score=55.04 Aligned_cols=253 Identities=9% Similarity=0.088 Sum_probs=160.7
Q ss_pred CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeE
Q psy6213 23 RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNK 102 (330)
Q Consensus 23 d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~ 102 (330)
+..|.|-|+.++......... -.+.-.+| ..+.+|.-. ...+.++|+++ ...++.+.- ...|.-
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~----------AdsAIMnP-~~~iiALra-g~~lQiFnle~---K~klks~~~-~e~Vvf 110 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPIS----------ADSAIMNP-ASKVIALKA-GKTLQIFNIEM---KSKMKAHTM-TDDVTF 110 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECC----------CSEEEECS-SSSCEEEEE-TTEEEEEETTT---TEEEEEEEC-SSCCCE
T ss_pred CCeEEEEECCCCCcceecccc----------cceeeeCC-CCcEEEEec-CCeEEEEchHH---hhhhcceec-CCCceE
Confidence 446677777664433211111 13445677 777777765 67899999998 555555543 345666
Q ss_pred EEEEecCCCEEEEEecCCcEEEEEeec-CceeeeeecC----CCCeEEEEEcCCCCcEEEEEe------cCCcEEEEecC
Q psy6213 103 VSFHYVESNWLISGSQDGTMRLFDIRC-QESTKIFHSN----TESVRDVEFNPHSPYAFASVS------ENGTIQQWDVR 171 (330)
Q Consensus 103 i~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~------~dg~i~i~d~~ 171 (330)
=.|- +.+.|+-.+ +..|+-|++.. ..+.+.+..| ...|..-..+++.++++++|- -.|.+.+|..+
T Consensus 111 WkWi--s~~~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e 187 (494)
T 1bpo_A 111 WKWI--SLNTVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD 187 (494)
T ss_dssp EEEE--ETTEEEEEC-SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEEST
T ss_pred EEec--CCCeEEEEc-CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecc
Confidence 6776 466677666 45899999974 3455555543 356777788999998777764 34778899988
Q ss_pred CCccceeeeccCCCCeEEEEEcCC---CCEEEEEecC---CcEEEEeCCCCc---cc------cceec---cccceEEEE
Q psy6213 172 RPEKCFYQFTAHSGPIFACDWHPE---HAWLATASRD---KTIKVWDLSIKP---SL------EYSIN---TIASVSRIK 233 (330)
Q Consensus 172 ~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~d---g~i~i~d~~~~~---~~------~~~~~---~~~~v~~~~ 233 (330)
. +.-+.+++|...-..+....+ .++++.+... +.++|.++.... .. ....+ ...-..++.
T Consensus 188 r--~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamq 265 (494)
T 1bpo_A 188 R--KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQ 265 (494)
T ss_dssp T--CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEE
T ss_pred c--cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEE
Confidence 5 445667777665544444321 1244444432 789999985431 10 00111 133456777
Q ss_pred EcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeee
Q psy6213 234 WRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAK 300 (330)
Q Consensus 234 ~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~ 300 (330)
.++.-..++... .-|.+++||++++.. +..-+-...+|...+.+.+..-++.....|.|.--.
T Consensus 266 vs~kygviyviT---K~G~i~lyDleTgt~-i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~ 328 (494)
T 1bpo_A 266 ISEKHDVVFLIT---KYGYIHLYDLETGTC-IYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVC 328 (494)
T ss_dssp EETTTTEEEEEE---TTSEEEEEETTTCCE-EEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEE
T ss_pred ecccCCEEEEEe---cCceEEEEeccccee-eeeecccCCceEEecccCCCCcEEEEccCceEEEEE
Confidence 787777555444 599999999999987 666666667777767666656666677888776543
No 307
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=98.16 E-value=0.0018 Score=53.28 Aligned_cols=233 Identities=11% Similarity=0.084 Sum_probs=119.4
Q ss_pred cceEEEEeeCCC-eeecC-CCeEEEEEcCCcceeeeec-eeeccccccccceeeeeecccC---CcEEEEE-cC------
Q psy6213 6 PVHKHGLKADNG-LAQPS-RNVFKIFLIKDTEFVETHN-LRVGKNINLNFSCNDVAWSCIE---ENHIATG-AT------ 72 (330)
Q Consensus 6 ~v~~~~~s~~~~-~~~~g-d~~i~iw~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~---~~~l~~~-~~------ 72 (330)
....|+|.|+|+ ++++. .|.|++++.+ +.....+. ... ....-......++++| + +..|+.. ..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~-v~~~g~~g~~gia~~p-df~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPD-VWAHGQGGLLDVVLAP-DFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCC-CCCSTTCSEEEEEECT-THHHHCEEEEEEEEECSSSC
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcc-cccCCCCCceeEEECC-CCCCCCEEEEEEeCCCCCCC
Confidence 457899999999 77777 9999999854 33221111 110 0001112347899998 4 4444443 22
Q ss_pred -CCcEEEEECCCCC-CCceeE-Eecc------cccceeEEEEEecCCCEEEEEecC-------------CcEEEEEeecC
Q psy6213 73 -NGAVVVWNLGQIS-RSKQER-VFND------HKRTVNKVSFHYVESNWLISGSQD-------------GTMRLFDIRCQ 130 (330)
Q Consensus 73 -dg~i~iw~~~~~~-~~~~~~-~~~~------~~~~i~~i~~~~~~~~~l~~~~~d-------------~~i~i~d~~~~ 130 (330)
...|..++..... ...... .+.. .......+.|.| ++.+.++.+.. |.|.-++....
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 2346666664321 011111 1111 112246799998 77666655432 45666665422
Q ss_pred c------------eeeeeecCCCCeEEEEEcC-CCCcEEEEEecC--CcEEEEecCCCc---------------------
Q psy6213 131 E------------STKIFHSNTESVRDVEFNP-HSPYAFASVSEN--GTIQQWDVRRPE--------------------- 174 (330)
Q Consensus 131 ~------------~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~~d--g~i~i~d~~~~~--------------------- 174 (330)
- ....+...-.....++|+| ++. +++ +... +.=.|.-+..+.
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~-l~~-~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~ 252 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNA-LWL-NEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEA 252 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTE-EEE-EEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTC
T ss_pred CCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCC-EEE-EecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcc
Confidence 0 1222222234477899999 554 443 3322 111222111110
Q ss_pred ---------cceeeeccCCCCeEEEEEcC-------CCCEEEEEecCCcEEEEeCCCCccccc--ee-ccccceEEEEEc
Q psy6213 175 ---------KCFYQFTAHSGPIFACDWHP-------EHAWLATASRDKTIKVWDLSIKPSLEY--SI-NTIASVSRIKWR 235 (330)
Q Consensus 175 ---------~~~~~~~~~~~~i~~~~~~~-------~~~~l~~~~~dg~i~i~d~~~~~~~~~--~~-~~~~~v~~~~~~ 235 (330)
.+...+. +...+..+.|.+ +|+++++.-..+.|...++...+.... .. .....+..+++.
T Consensus 253 ~~~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~ 331 (353)
T 2g8s_A 253 KGEIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTG 331 (353)
T ss_dssp CBSSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEEC
T ss_pred cCCCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEEC
Confidence 0111122 223566777764 467777777778888888775422111 11 223578999999
Q ss_pred CCCCeEEEEe
Q psy6213 236 PQRKFHLASC 245 (330)
Q Consensus 236 ~~~~~l~~~~ 245 (330)
|||..++++-
T Consensus 332 pdG~lyv~td 341 (353)
T 2g8s_A 332 PDGYLYVLTD 341 (353)
T ss_dssp TTSCEEEEEC
T ss_pred CCCcEEEEEe
Confidence 9998544443
No 308
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=98.13 E-value=0.0024 Score=52.54 Aligned_cols=228 Identities=12% Similarity=0.067 Sum_probs=121.5
Q ss_pred eeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEec---ccccceeEEEEEec---CCCEEEEEec---C----C
Q psy6213 54 CNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFN---DHKRTVNKVSFHYV---ESNWLISGSQ---D----G 120 (330)
Q Consensus 54 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~---~~~~~i~~i~~~~~---~~~~l~~~~~---d----~ 120 (330)
...++|.| ++++++ +..+|.|.+++... . ..+..+. ........|+++|+ ++.+.++-+. + .
T Consensus 31 P~~ia~~p-dG~l~V-~e~~g~I~~~d~~G--~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 31 PWSIAPLG-GGRYLV-TERPGRLVLISPSG--K-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp EEEEEEEE-TTEEEE-EETTTEEEEECSSC--E-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CeEEEEcC-CCeEEE-EeCCCEEEEEeCCC--c-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 37899999 877555 45569999887322 1 2222221 12356789999983 2444444332 3 5
Q ss_pred cEEEEEeecC-------cee-eeeec-CCCCeEEEEEcCCCCcEEEEEec-------------CCcEEEEecCCCc----
Q psy6213 121 TMRLFDIRCQ-------EST-KIFHS-NTESVRDVEFNPHSPYAFASVSE-------------NGTIQQWDVRRPE---- 174 (330)
Q Consensus 121 ~i~i~d~~~~-------~~~-~~~~~-~~~~v~~~~~~~~~~~~~~~~~~-------------dg~i~i~d~~~~~---- 174 (330)
.|..|+.... +.+ ..+.. .......++|.|+|. ++++.+. .|.|..++....-
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 6777877643 111 11221 112346799999997 5665432 2456666654210
Q ss_pred ---cceeeeccCCCCeEEEEEcC-CCCEEEEEecCC---cEEEEeCCC--------C-------cccccee-ccccceEE
Q psy6213 175 ---KCFYQFTAHSGPIFACDWHP-EHAWLATASRDK---TIKVWDLSI--------K-------PSLEYSI-NTIASVSR 231 (330)
Q Consensus 175 ---~~~~~~~~~~~~i~~~~~~~-~~~~l~~~~~dg---~i~i~d~~~--------~-------~~~~~~~-~~~~~v~~ 231 (330)
.....-.++ .....++|+| ++.++++-...+ .|.+..... . ....... ........
T Consensus 185 pf~~~~i~a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G 263 (354)
T 3a9g_A 185 PFPNSPIWSYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSG 263 (354)
T ss_dssp SSTTCCEEEECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEE
T ss_pred CCCCCcEEEEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcc
Confidence 001111223 2356899999 666555443322 243332111 0 0011111 12345778
Q ss_pred EEEc-------CCCCeEEEEeecccCCeEEEEEccCCCccc--eEe-ecCCCCeEEEEEecCCCEEEEee
Q psy6213 232 IKWR-------PQRKFHLASCSLVVDSSVNVWDIRRPYIPL--ASF-TEHKDVVSGLAWRGDPQLFIASS 291 (330)
Q Consensus 232 ~~~~-------~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~--~~~-~~~~~~v~~~~~~~~~~~l~s~~ 291 (330)
++|. .+|.. +++.. ..+.|...++....... ..+ ......+.++++.|||.+.++..
T Consensus 264 ~~~y~g~~fp~~~G~l-~v~~~--~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 264 ASFVHGDMFPGLRGWL-LIACL--RGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp EEECCSSSCGGGTTEE-EEEET--TTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred eEEECCCCCcccCCcE-EEEEc--CCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 8884 46654 44443 47889988887532211 122 22245789999999998766654
No 309
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.03 E-value=0.003 Score=50.29 Aligned_cols=235 Identities=13% Similarity=0.172 Sum_probs=142.5
Q ss_pred EEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCc
Q psy6213 10 HGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSK 88 (330)
Q Consensus 10 ~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~ 88 (330)
.-.+|..+.++-- ...+.|+|+++.+.+..+..... |.-=.|- +.+.|+..+. ..|+-|+++.. ..
T Consensus 72 AIMnP~~~ViALrag~~LQiFnletK~klks~~~~e~--------VvfWkWi--s~~~L~lVT~-taVyHWs~~~~--s~ 138 (365)
T 2xzh_A 72 AIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDD--------VTFWKWI--SLNTVALVTD-NAVYHWSMEGE--SQ 138 (365)
T ss_dssp EEECSSSSEEEEEETTEEEEEETTTTEEEEEEECSSC--------EEEEEEC--SSSEEEEEES-SEEEEEESSTT--CC
T ss_pred eeeCCCccEEEEecCCeEEEechHHhhhhcceecCCc--------cEEEEec--CCCeEEEEcC-CcEEEEcccCC--CC
Confidence 4457777776665 88999999999887776665421 3455665 4566666553 57999999762 45
Q ss_pred eeEEecccc----cceeEEEEEecCCCEEEEEe-------cCCcEEEEEeecCceeeeeecCCCCeEEEEEcCC--CCcE
Q psy6213 89 QERVFNDHK----RTVNKVSFHYVESNWLISGS-------QDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPH--SPYA 155 (330)
Q Consensus 89 ~~~~~~~~~----~~i~~i~~~~~~~~~l~~~~-------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~ 155 (330)
+.+.+..|. ..|..-..++ +.++++..+ -.|.+.+|..+ .+.-+.+++|......+.+..+ ...+
T Consensus 139 P~kvFdR~~~L~~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~e-r~~sQ~ieGhaa~F~~~~~~g~~~~~~l 216 (365)
T 2xzh_A 139 PVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFAQFKMEGNAEESTL 216 (365)
T ss_dssp CEEEEECCGGGTTCEEEEEEECT-TSCEEEEEEEEEETTEEEEEEEEEETT-TTEEEEECCSEEEEEEECCTTCSSCEEE
T ss_pred CceeeecchhcccceEEEEEECC-CCCEEEEEeEeccCCccceeEEEEeec-ccccceeeeeeeeeEEEecCCCCCCceE
Confidence 555555543 3455555565 566655433 23678888876 3445566766554443333211 1224
Q ss_pred EEEEec---CCcEEEEecCCC--cccee------eecc---CCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccc
Q psy6213 156 FASVSE---NGTIQQWDVRRP--EKCFY------QFTA---HSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEY 221 (330)
Q Consensus 156 ~~~~~~---dg~i~i~d~~~~--~~~~~------~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 221 (330)
++.+.. .+.+++-++..+ +.+.. .+.. ..+-..++..++....+..-+.-|.+++||+.++.++..
T Consensus 217 f~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~ 296 (365)
T 2xzh_A 217 FCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 296 (365)
T ss_dssp EEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred EEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEE
Confidence 444433 258999998543 11111 1111 234456788888888899999999999999999966655
Q ss_pred eeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCC
Q psy6213 222 SINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY 262 (330)
Q Consensus 222 ~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~ 262 (330)
..-....|...+-+....-+++.. ..|.|.-..++...
T Consensus 297 nrIS~d~iF~ta~~~~~~Gi~~Vn---r~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 297 NRISGETIFVTAPHEATAGIIGVN---RKGQVLSVCVEEEN 334 (365)
T ss_dssp EECCSSCEEEEEEEGGGTEEEEEE---TTCEEEEEEECTTT
T ss_pred eccCCCceEEecccCCCCcEEEEc---CCCEEEEEEECccc
Confidence 554555555444444433333333 36666666655443
No 310
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.99 E-value=0.0043 Score=50.73 Aligned_cols=184 Identities=11% Similarity=0.122 Sum_probs=107.7
Q ss_pred eeeeeecccCCcEEEEE------------cCCCcEEEEECCCCC-CCceeEEecc-----cccceeEEEEEec-CCC-EE
Q psy6213 54 CNDVAWSCIEENHIATG------------ATNGAVVVWNLGQIS-RSKQERVFND-----HKRTVNKVSFHYV-ESN-WL 113 (330)
Q Consensus 54 v~~~~~~~~~~~~l~~~------------~~dg~i~iw~~~~~~-~~~~~~~~~~-----~~~~i~~i~~~~~-~~~-~l 113 (330)
+.+++..| ++..++++ ..+|.|.++|..+.. +.+.+. +.+ ..-....+.+.++ ++. +|
T Consensus 52 ~EDi~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~-~~g~~~~~~~f~PhGi~~~~d~dg~~~L 129 (355)
T 3sre_A 52 SEDLEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELE-IIGNTLDISSFNPHGISTFIDDDNTVYL 129 (355)
T ss_dssp CCEEEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECE-EECSSCCGGGCCEEEEEEEECTTCCEEE
T ss_pred cceeEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEE-ccCCCCCcCceeeeeeEEEECCCCcEEE
Confidence 46777877 66555554 268999999987521 112222 222 2345677777652 232 34
Q ss_pred EEE-ec--CCcEEEEEeecCce----eeeeecC-CCCeEEEEEcCCCCcEEEEEe-----------------cCCcEEEE
Q psy6213 114 ISG-SQ--DGTMRLFDIRCQES----TKIFHSN-TESVRDVEFNPHSPYAFASVS-----------------ENGTIQQW 168 (330)
Q Consensus 114 ~~~-~~--d~~i~i~d~~~~~~----~~~~~~~-~~~v~~~~~~~~~~~~~~~~~-----------------~dg~i~i~ 168 (330)
+++ .. +.+|.+|++..... +..+.+. -...+.+.+.++|. ++++.. ..|.|+.+
T Consensus 130 ~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~ 208 (355)
T 3sre_A 130 LVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYY 208 (355)
T ss_dssp EEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEEE
T ss_pred EEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEEE
Confidence 444 22 46788888875422 2233322 24578999999997 455543 12456666
Q ss_pred ecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEe-cCCcEEEEeCCCCccc--cceeccccceEEEEEcC-CCCeEEEE
Q psy6213 169 DVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS-RDKTIKVWDLSIKPSL--EYSINTIASVSRIKWRP-QRKFHLAS 244 (330)
Q Consensus 169 d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~l~~~ 244 (330)
|.. + ...+...-...+.++|+||++.|+.+. ..+.|..|++.....+ ............+++.+ +|...+++
T Consensus 209 d~~---~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~ 284 (355)
T 3sre_A 209 SPN---D-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGC 284 (355)
T ss_dssp CTT---C-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEE
T ss_pred ECC---e-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEe
Confidence 653 2 222333345678999999998776655 5788999998643221 11123356678899999 58864434
No 311
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.97 E-value=0.0016 Score=53.87 Aligned_cols=143 Identities=13% Similarity=0.173 Sum_probs=93.0
Q ss_pred cCCCCcEEEEEecCCcEEEEecCCCccceeeeccC----CCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcccc----
Q psy6213 149 NPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAH----SGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE---- 220 (330)
Q Consensus 149 ~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~---- 220 (330)
..++.. ++.+ .++.||.-++.... ..+.+... ...|..+..+|+|++||..+. ..|.|-.+..+....
T Consensus 29 ~~n~t~-i~~a-~~n~iR~~~i~~~~-~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~ 104 (452)
T 3pbp_A 29 SQNGTR-IVFI-QDNIIRWYNVLTDS-LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVS 104 (452)
T ss_dssp ETTTTE-EEEE-ETTEEEEEETTTCS-SCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHH
T ss_pred EcCCCE-EEEE-ECCEEEEEECCCCC-cceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccc
Confidence 344443 3332 34778888877422 33343322 236788999999999998875 589998887332110
Q ss_pred ---------ceec-----cccceEEEEEcCCC---CeEEEEeecccCCeEEEEEccCCC-ccceEee---------cCCC
Q psy6213 221 ---------YSIN-----TIASVSRIKWRPQR---KFHLASCSLVVDSSVNVWDIRRPY-IPLASFT---------EHKD 273 (330)
Q Consensus 221 ---------~~~~-----~~~~v~~~~~~~~~---~~l~~~~~~~~~~~i~i~d~~~~~-~~~~~~~---------~~~~ 273 (330)
...+ ...+|..+.|+|-+ ..|++-. .|+.|++||+.... .|. .+. ....
T Consensus 105 ~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLt---sD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ 180 (452)
T 3pbp_A 105 IQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLK---EDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVN 180 (452)
T ss_dssp HHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEE---TTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCC
T ss_pred cccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEe---cCCEEEEEEcccCCCCCc-chhccccccCCCcccc
Confidence 1111 24679999999964 4555555 49999999998632 222 222 2225
Q ss_pred CeEEEEEecCCCEEEEee--cCCeEeee
Q psy6213 274 VVSGLAWRGDPQLFIASS--RVSIIPRA 299 (330)
Q Consensus 274 ~v~~~~~~~~~~~l~s~~--~dg~i~iw 299 (330)
.|.+++|.+++-.|...+ ..|.|+-.
T Consensus 181 ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 181 DITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred eEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 789999999888888855 78888764
No 312
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.91 E-value=0.0061 Score=49.62 Aligned_cols=238 Identities=9% Similarity=0.027 Sum_probs=121.2
Q ss_pred ccceEEEEeeCCCeeecC--CCeEEEEEcCCcceeeeeceeeccccccccceeeeeeccc---CCcEEEEE--cCCCcEE
Q psy6213 5 SPVHKHGLKADNGLAQPS--RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCI---EENHIATG--ATNGAVV 77 (330)
Q Consensus 5 ~~v~~~~~s~~~~~~~~g--d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~--~~dg~i~ 77 (330)
..-+.|+|.|||+++++. .|.|++++..+++......... ....-......++++|+ ++.+.++- ..++.|.
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~-v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPG-VSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTT-CCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCc-eeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 345789999999996665 8999999866555322211110 00011223488999982 24333332 2345566
Q ss_pred EEECCCCC-------CCcee-EEec-ccccceeEEEEEecCCCEEEEEec-------------CCcEEEEEeecCc----
Q psy6213 78 VWNLGQIS-------RSKQE-RVFN-DHKRTVNKVSFHYVESNWLISGSQ-------------DGTMRLFDIRCQE---- 131 (330)
Q Consensus 78 iw~~~~~~-------~~~~~-~~~~-~~~~~i~~i~~~~~~~~~l~~~~~-------------d~~i~i~d~~~~~---- 131 (330)
-|...... ..+.+ ..+. .....-..|.|.| ++.+.++.+. .|.|.-.+....-
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 66654411 01111 1121 1122456799998 7777776542 2455544543210
Q ss_pred ---eeeeeecCCCCeEEEEEcCCCCcEEEEE-ecCCcEEEEecCCCc-----------------cceeeeccCCCCeEEE
Q psy6213 132 ---STKIFHSNTESVRDVEFNPHSPYAFASV-SENGTIQQWDVRRPE-----------------KCFYQFTAHSGPIFAC 190 (330)
Q Consensus 132 ---~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~dg~i~i~d~~~~~-----------------~~~~~~~~~~~~i~~~ 190 (330)
....+...-.....++|+|++. ++++= +.++.=.+--+..+. .++..+..+......+
T Consensus 190 Pf~~~~i~a~G~RNp~Gla~dp~G~-L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~ 268 (347)
T 3das_A 190 PFPGSPVYSYGHRNVQGLAWDDKQR-LFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGI 268 (347)
T ss_dssp SSTTCCEEEBCCSBCCEEEECTTCC-EEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEE
T ss_pred CCCCCeEEeeCCCCcceEEECCCCC-EEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcce
Confidence 0112222223456789999876 44332 222222222222211 1122222222355677
Q ss_pred EEcCCCCEEEEEecCCcEEEEeCCCCccc---c-ceeccccceEEEEEcCCCCeEEEEee
Q psy6213 191 DWHPEHAWLATASRDKTIKVWDLSIKPSL---E-YSINTIASVSRIKWRPQRKFHLASCS 246 (330)
Q Consensus 191 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---~-~~~~~~~~v~~~~~~~~~~~l~~~~~ 246 (330)
+|. +|.++...-..+.|....+...... . ........+..++..|||..++++..
T Consensus 269 ~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td~ 327 (347)
T 3das_A 269 AYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTSN 327 (347)
T ss_dssp EEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEECT
T ss_pred EEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEcC
Confidence 776 4666666666667777676544211 1 11123467899999999986555543
No 313
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.90 E-value=0.0072 Score=50.17 Aligned_cols=236 Identities=13% Similarity=0.168 Sum_probs=147.9
Q ss_pred EEEEeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCC
Q psy6213 9 KHGLKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRS 87 (330)
Q Consensus 9 ~~~~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~ 87 (330)
+.-.+|..+.++-- ...+.|+|+++.+....+..... |.-=.|- +.+.|+..+ +..|+-|+++.. .
T Consensus 70 sAIMnP~~~iiALrag~~lQiFnle~K~klks~~~~e~--------VvfWkWi--s~~~l~lVT-~taVyHWsi~~~--s 136 (494)
T 1bpo_A 70 SAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDD--------VTFWKWI--SLNTVALVT-DNAVYHWSMEGE--S 136 (494)
T ss_dssp EEEECSSSSCEEEEETTEEEEEETTTTEEEEEEECSSC--------CCEEEEE--ETTEEEEEC-SSEEEEEESSSS--C
T ss_pred eeeeCCCCcEEEEecCCeEEEEchHHhhhhcceecCCC--------ceEEEec--CCCeEEEEc-CCeeEEecccCC--C
Confidence 34457777776666 89999999999887776665432 3445665 456666665 357999999752 4
Q ss_pred ceeEEecccc----cceeEEEEEecCCCEEEEEe-------cCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCC--Cc
Q psy6213 88 KQERVFNDHK----RTVNKVSFHYVESNWLISGS-------QDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHS--PY 154 (330)
Q Consensus 88 ~~~~~~~~~~----~~i~~i~~~~~~~~~l~~~~-------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~--~~ 154 (330)
.+.+.+..|. ..|..-..++ +.++++..| -.|.+.+|..+ .+.-+.+++|......+....+. ..
T Consensus 137 ~P~kvFdR~~~L~~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~e-r~~sQ~ieGhaa~F~~~~~~g~~~~~~ 214 (494)
T 1bpo_A 137 QPVKMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVD-RKVSQPIEGHAASFAQFKMEGNAEEST 214 (494)
T ss_dssp CCEEEEECCGGGTTCEEEEEEECT-TSSEEEEEEEEEETTEEEEEEEEEEST-TCCEEEECCSEEEEEEEECTTCSSEEE
T ss_pred CchhheecchhcccceEEEEEECC-CCCeEEEEeecccCCcccceEEEeecc-ccccchheeeeeeeEEEecCCCCCCce
Confidence 5555665543 3455556665 666665433 24678888876 34456677776555444443221 22
Q ss_pred EEEEEecC---CcEEEEecCCC--ccce------eeec---cCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcccc
Q psy6213 155 AFASVSEN---GTIQQWDVRRP--EKCF------YQFT---AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE 220 (330)
Q Consensus 155 ~~~~~~~d---g~i~i~d~~~~--~~~~------~~~~---~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 220 (330)
+++.+... +.+++.++..+ +.+. ..+. .-.+-..++..++....+..-+.-|.+.+||+.++..+.
T Consensus 215 lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~ 294 (494)
T 1bpo_A 215 LFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY 294 (494)
T ss_dssp EEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeee
Confidence 45544443 78999998653 1111 1111 123445678888888899999999999999999997665
Q ss_pred ceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCC
Q psy6213 221 YSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY 262 (330)
Q Consensus 221 ~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~ 262 (330)
...-...+|...+-+....-+++.. ..|.|.-..++...
T Consensus 295 ~nrIs~~~iF~t~~~~~~~Gi~~Vn---r~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 295 MNRISGETIFVTAPHEATAGIIGVN---RKGQVLSVCVEEEN 333 (494)
T ss_dssp EEECCSSCEEEEEEETTTTEEEEEE---TTCEEEEEEECTTT
T ss_pred eecccCCceEEecccCCCCcEEEEc---cCceEEEEEEcccc
Confidence 5555556665555555544434443 47777766666554
No 314
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.86 E-value=0.0036 Score=50.05 Aligned_cols=177 Identities=8% Similarity=0.067 Sum_probs=89.3
Q ss_pred CeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCC-----CcEEEEECCCCCC--CceeEEeccc
Q psy6213 24 NVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATN-----GAVVVWNLGQISR--SKQERVFNDH 96 (330)
Q Consensus 24 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~~--~~~~~~~~~~ 96 (330)
..+.+||..+++.......+.... . .+++. . ++.+++.|+.+ ..+.+||..+... ......+...
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~-----~-~~~~~-~-~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~ 102 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRR-----Y-VASVS-L-HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVR 102 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCB-----S-CEEEE-E-TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSC
T ss_pred eEEEEEcCCCCeEEeCCCCChhhc-----c-ccEEE-E-CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCC
Confidence 478889988876544332221111 0 12222 2 56777888765 3588999877320 2222222211
Q ss_pred ccceeEEEEEecCCCEEEEEecC-----CcEEEEEeecCceeee--eecCCCCeEEEEEcCCCCcEEEEEecC-----Cc
Q psy6213 97 KRTVNKVSFHYVESNWLISGSQD-----GTMRLFDIRCQESTKI--FHSNTESVRDVEFNPHSPYAFASVSEN-----GT 164 (330)
Q Consensus 97 ~~~i~~i~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~d-----g~ 164 (330)
... .+++.. ++.+++.|+.+ ..+.+||+.+.+-... +.........+.+ ++. +++.|+.+ ..
T Consensus 103 r~~-~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~ 176 (301)
T 2vpj_A 103 RGL-AGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGV-IYCLGGYDGLNILNS 176 (301)
T ss_dssp CBS-CEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCC
T ss_pred ccc-eeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCE-EEEECCCCCCcccce
Confidence 111 122222 56777777654 3588888876553322 1111111122222 444 67777654 45
Q ss_pred EEEEecCCCccc-eeeeccCCCCeEEEEEcCCCCEEEEEecC-----CcEEEEeCCCC
Q psy6213 165 IQQWDVRRPEKC-FYQFTAHSGPIFACDWHPEHAWLATASRD-----KTIKVWDLSIK 216 (330)
Q Consensus 165 i~i~d~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~ 216 (330)
+.+||+.+..-. +..+.........+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 177 ~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 177 VEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp EEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred EEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCC
Confidence 888998763211 1111111111122222 56777777764 46899998876
No 315
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.85 E-value=0.0081 Score=49.34 Aligned_cols=234 Identities=11% Similarity=0.079 Sum_probs=120.0
Q ss_pred eeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEE----ecccccceeEEEEEec---CCCEEEEEec-------CC
Q psy6213 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERV----FNDHKRTVNKVSFHYV---ESNWLISGSQ-------DG 120 (330)
Q Consensus 55 ~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~----~~~~~~~i~~i~~~~~---~~~~l~~~~~-------d~ 120 (330)
..++|.| +++.|+++...|.|++++.... ....+.. ..........++++|+ ++.+.++-.. ..
T Consensus 21 ~~i~~~p-dG~~l~V~e~~G~i~~~~~~g~-~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 21 WALAFLP-DNHGMLITLRGGELRHWQAGKG-LSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp EEEEECS-TTCCEEEEETTTEEEEEETTTE-ECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred EEEEEcC-CCCEEEEEeCCceEEEEeCCCc-eeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 7899999 8883444556799999985321 0011111 1122345689999983 3444444332 23
Q ss_pred cEEEEEeecCc----eee-eeec------CCCCeEEEEEcCCCCcEEEEEec-------------CCcEEEEecCCCc--
Q psy6213 121 TMRLFDIRCQE----STK-IFHS------NTESVRDVEFNPHSPYAFASVSE-------------NGTIQQWDVRRPE-- 174 (330)
Q Consensus 121 ~i~i~d~~~~~----~~~-~~~~------~~~~v~~~~~~~~~~~~~~~~~~-------------dg~i~i~d~~~~~-- 174 (330)
.|..+++.... ... .+.. .......++|.|++. ++++.+. .|.|.-++....-
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGY-LFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSE-EEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCc-EEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 56666664321 111 1111 111245799999995 5555433 2457666665310
Q ss_pred -c--------ceeee-ccCCCCeEEEEEcC-CCCEEEEEec-CCcEEEEeCCCCcc------------------------
Q psy6213 175 -K--------CFYQF-TAHSGPIFACDWHP-EHAWLATASR-DKTIKVWDLSIKPS------------------------ 218 (330)
Q Consensus 175 -~--------~~~~~-~~~~~~i~~~~~~~-~~~~l~~~~~-dg~i~i~d~~~~~~------------------------ 218 (330)
. ....+ .++ .....++|+| ++.++++-.. ++.=.|.-+..+..
T Consensus 178 ~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~~ 256 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGEI 256 (353)
T ss_dssp TCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBSS
T ss_pred CCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCCC
Confidence 0 11111 122 3467899999 5654443221 11112221211100
Q ss_pred ------ccceeccccceEEEEEcC-------CCCeEEEEeecccCCeEEEEEccCCCccceE--e-ecCCCCeEEEEEec
Q psy6213 219 ------LEYSINTIASVSRIKWRP-------QRKFHLASCSLVVDSSVNVWDIRRPYIPLAS--F-TEHKDVVSGLAWRG 282 (330)
Q Consensus 219 ------~~~~~~~~~~v~~~~~~~-------~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~--~-~~~~~~v~~~~~~~ 282 (330)
......+...+..++|.. ++.+ +++.- ..+.|...++..+.. ... + ......+.++++.|
T Consensus 257 ~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g~l-~v~~~--~~~~v~~~~~~~~~~-~~~~~~~~~~~~rp~~v~~~p 332 (353)
T 2g8s_A 257 VAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQKL-FIGAL--KDKDVIVMSVNGDKV-TEDGRILTDRGQRIRDVRTGP 332 (353)
T ss_dssp CTTSCCCSEEESSCCCEEEEEEECCSSSGGGTTEE-EEEET--TTTEEEEEEEETTEE-EEEEEESGGGCCCEEEEEECT
T ss_pred CCCccCCeEEeCCCcCcceeEEECCccCcccCCcE-EEEEc--cCCEEEEEEeCCCeE-eeeEEcccCCCCceeEEEECC
Confidence 000111223567777764 4554 44443 478888888875432 221 1 12235799999999
Q ss_pred CCCEEEEee-cCCeE
Q psy6213 283 DPQLFIASS-RVSII 296 (330)
Q Consensus 283 ~~~~l~s~~-~dg~i 296 (330)
||.+.++.. .+|.|
T Consensus 333 dG~lyv~td~~~g~I 347 (353)
T 2g8s_A 333 DGYLYVLTDESSGEL 347 (353)
T ss_dssp TSCEEEEECSTTEEE
T ss_pred CCcEEEEEeCCCCEE
Confidence 998666533 35544
No 316
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.85 E-value=0.0036 Score=59.68 Aligned_cols=229 Identities=10% Similarity=0.098 Sum_probs=134.4
Q ss_pred eeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeec-Cceee
Q psy6213 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC-QESTK 134 (330)
Q Consensus 56 ~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~ 134 (330)
+.-.+| ..+.+|.-. ...+.|+|+++ ...++.+.- ..+|.-=.|- +.+.|+-.+ +..|+-|++.. ..+.+
T Consensus 70 sAIMnP-~~~iiALra-g~~lQiFnl~~---k~klks~~~-~e~VvfWkWi--s~~~l~lVT-~~aVyHW~~~~~s~P~k 140 (1630)
T 1xi4_A 70 SAIMNP-ASKVIALKA-GKTLQIFNIEM---KSKMKAHTM-TDDVTFWKWI--SLNTVALVT-DNAVYHWSMEGESQPVK 140 (1630)
T ss_pred hhccCC-CcceEEEec-CCeEEEeehHH---hhhhccccc-CCCceEEEec--CCCeeEEEc-CCeEEEeccCCCCccHH
Confidence 344567 677777665 67899999987 444444332 3456555665 566666666 45899999964 34444
Q ss_pred eeecC----CCCeEEEEEcCCCCcEEEEEe------cCCcEEEEecCCCccceeeeccCCCCeEEEEEcC--C-CCEEEE
Q psy6213 135 IFHSN----TESVRDVEFNPHSPYAFASVS------ENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHP--E-HAWLAT 201 (330)
Q Consensus 135 ~~~~~----~~~v~~~~~~~~~~~~~~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~--~-~~~l~~ 201 (330)
.+..| ...|..-..+++.++++++|- -.|.+.+|..+. +..+.+.+|.+.-..+.... . .+.++.
T Consensus 141 ~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er--~~sQ~iegha~~F~~~~~~~~~~~~~l~~f 218 (1630)
T 1xi4_A 141 MFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR--KVSQPIEGHAASFAQFKMEGNAEESTLFCF 218 (1630)
T ss_pred HHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc--ccchhhhHhHhhhheeccCCCCCCceEEEE
Confidence 44433 456777788899998777764 357899999875 33455666655443333321 1 223332
Q ss_pred Eec---CCcEEEEeCCCCc---cc------cceec---cccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccce
Q psy6213 202 ASR---DKTIKVWDLSIKP---SL------EYSIN---TIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266 (330)
Q Consensus 202 ~~~---dg~i~i~d~~~~~---~~------~~~~~---~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~ 266 (330)
+.. .+.++|.++.... .. ....+ ...-..++..++.-..++... .-|.+.+||+.++.. +.
T Consensus 219 ~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~it---k~G~~~~~d~~t~~~-i~ 294 (1630)
T 1xi4_A 219 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLIT---KYGYIHLYDLETGTC-IY 294 (1630)
T ss_pred EEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEe---cCceEEEEecccchh-hh
Confidence 222 2689999885430 10 01111 123345666777666544444 599999999999876 44
Q ss_pred EeecCCCCeEEEEEecCCCEEEEeecCCeEeee
Q psy6213 267 SFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRA 299 (330)
Q Consensus 267 ~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw 299 (330)
.-+-...+|...+-++...-++.....|.|.--
T Consensus 295 ~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v 327 (1630)
T 1xi4_A 295 MNRISGETIFVTAPHEATAGIIGVNRKGQVLSV 327 (1630)
T ss_pred hccccCCceEEeccCCCCCceEEEcCCceEEEE
Confidence 444444555544444433334444566655443
No 317
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.85 E-value=0.0052 Score=49.27 Aligned_cols=224 Identities=8% Similarity=0.017 Sum_probs=109.8
Q ss_pred eecC---CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCC----CcEEEEECCCCCCCceeE
Q psy6213 19 AQPS---RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATN----GAVVVWNLGQISRSKQER 91 (330)
Q Consensus 19 ~~~g---d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d----g~i~iw~~~~~~~~~~~~ 91 (330)
+..| ...+.+||..+++............ . .+++. - ++.+++.|+.+ ..+.+||..+. ......
T Consensus 16 ~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~-----~-~~~~~-~-~~~lyv~GG~~~~~~~~~~~~d~~~~-~W~~~~ 86 (306)
T 3ii7_A 16 ALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRR-----D-AACVF-W-DNVVYILGGSQLFPIKRMDCYNVVKD-SWYSKL 86 (306)
T ss_dssp EEECCSSTTSEEEEETTTTEEEECCCCSCCCB-----S-CEEEE-E-TTEEEEECCBSSSBCCEEEEEETTTT-EEEEEE
T ss_pred EEeCCCCCceEEEecCCCCCEecCCCCCcccc-----e-eEEEE-E-CCEEEEEeCCCCCCcceEEEEeCCCC-eEEECC
Confidence 5555 4678999998877554432222111 0 12222 2 56777888755 56888998762 122222
Q ss_pred EecccccceeEEEEEecCCCEEEEEecC------CcEEEEEeecCceeee--eecCCCCeEEEEEcCCCCcEEEEEec--
Q psy6213 92 VFNDHKRTVNKVSFHYVESNWLISGSQD------GTMRLFDIRCQESTKI--FHSNTESVRDVEFNPHSPYAFASVSE-- 161 (330)
Q Consensus 92 ~~~~~~~~i~~i~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~-- 161 (330)
.+...... .+++.. ++.+++.|+.+ ..+.+||..+.+-... +.........+. -++. +++.|+.
T Consensus 87 ~~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~-iyv~GG~~~ 160 (306)
T 3ii7_A 87 GPPTPRDS-LAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGL-IYVCGGSLG 160 (306)
T ss_dssp CCSSCCBS-CEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTE-EEEECCEES
T ss_pred CCCccccc-eeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCE-EEEECCCCC
Confidence 22211111 122222 67777888765 4688999877653322 111111112222 2444 6777654
Q ss_pred -------CCcEEEEecCCCccceeeeccCC--CCeEEEEEcCCCCEEEEEecC-----CcEEEEeCCCCcc--ccceecc
Q psy6213 162 -------NGTIQQWDVRRPEKCFYQFTAHS--GPIFACDWHPEHAWLATASRD-----KTIKVWDLSIKPS--LEYSINT 225 (330)
Q Consensus 162 -------dg~i~i~d~~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~--~~~~~~~ 225 (330)
...+.+||+.+.. -..+.... ..-.++... ++++++.|+.+ ..+.+||+.+.+- +......
T Consensus 161 ~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 237 (306)
T 3ii7_A 161 NNVSGRVLNSCEVYDPATET--WTELCPMIEARKNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWK 237 (306)
T ss_dssp CTTTCEECCCEEEEETTTTE--EEEECCCSSCCBSCEEEEE-TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCC
T ss_pred CCCcccccceEEEeCCCCCe--EEECCCccchhhcceEEEE-CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCC
Confidence 3458899988632 11221111 111122222 56777777654 3588999877521 1111111
Q ss_pred ccceEEEEEcCCCCeEEEEeec--ccCCeEEEEEccCCC
Q psy6213 226 IASVSRIKWRPQRKFHLASCSL--VVDSSVNVWDIRRPY 262 (330)
Q Consensus 226 ~~~v~~~~~~~~~~~l~~~~~~--~~~~~i~i~d~~~~~ 262 (330)
......+.+ +++.+++++.. ..-..+.+||+.+.+
T Consensus 238 r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 238 GVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp BSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred ccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 122233333 45543444320 012578888887754
No 318
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.82 E-value=0.0034 Score=50.19 Aligned_cols=224 Identities=9% Similarity=0.028 Sum_probs=105.8
Q ss_pred CCcEEEEEc-CC-----CcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecC-----CcEEEEEeecCc
Q psy6213 63 EENHIATGA-TN-----GAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQD-----GTMRLFDIRCQE 131 (330)
Q Consensus 63 ~~~~l~~~~-~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~ 131 (330)
++.+++.|+ .+ ..+.+||..+. ....+..+.... .-.+++.. ++.+++.|+.+ ..+.+||..+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r-~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQ-EWSFLPSITRKR-RYVASVSL--HDRIYVIGGYDGRSRLSSVECLDYTADE 89 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTT-EEEECCCCSSCC-BSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTCCT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCC-eEEeCCCCChhh-ccccEEEE--CCEEEEEcCCCCCccCceEEEEECCCCC
Confidence 456666666 33 36888888762 112221121111 11222222 67777777755 468899987765
Q ss_pred ---eeee--eecCCCCeEEEEEcCCCCcEEEEEecC-----CcEEEEecCCCcc-ceeeeccCCCCeEEEEEcCCCCEEE
Q psy6213 132 ---STKI--FHSNTESVRDVEFNPHSPYAFASVSEN-----GTIQQWDVRRPEK-CFYQFTAHSGPIFACDWHPEHAWLA 200 (330)
Q Consensus 132 ---~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~d-----g~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~ 200 (330)
-... +.........+.+ ++. +++.|+.+ ..+.+||+.+..- .+..+......-..+.+ ++++++
T Consensus 90 ~~~W~~~~~~p~~r~~~~~~~~--~~~-lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv 164 (301)
T 2vpj_A 90 DGVWYSVAPMNVRRGLAGATTL--GDM-IYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYC 164 (301)
T ss_dssp TCCCEEECCCSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEE
T ss_pred CCeeEECCCCCCCccceeEEEE--CCE-EEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEE
Confidence 2222 1111111222222 344 67777654 3588889876321 11111111111112222 677777
Q ss_pred EEecC-----CcEEEEeCCCCccccc-eecc-ccceEEEEEcCCCCeEEEEeeccc---CCeEEEEEccCCCccceEeec
Q psy6213 201 TASRD-----KTIKVWDLSIKPSLEY-SINT-IASVSRIKWRPQRKFHLASCSLVV---DSSVNVWDIRRPYIPLASFTE 270 (330)
Q Consensus 201 ~~~~d-----g~i~i~d~~~~~~~~~-~~~~-~~~v~~~~~~~~~~~l~~~~~~~~---~~~i~i~d~~~~~~~~~~~~~ 270 (330)
.|+.+ ..+.+||+.+.+-... ..+. ......+.+ +++ +++.++... ...+.+||+.+..- ..+..
T Consensus 165 ~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~W--~~~~~ 239 (301)
T 2vpj_A 165 LGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDH-IYVVGGFDGTAHLSSVEAYNIRTDSW--TTVTS 239 (301)
T ss_dssp ECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEETTTTEE--EEECC
T ss_pred ECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCE-EEEEeCCCCCcccceEEEEeCCCCcE--EECCC
Confidence 77754 4588999876622111 1111 111222222 444 444444111 25789999987642 12211
Q ss_pred -CCCC-eEEEEEecCCCEEEEeecCC-----eEeeeec
Q psy6213 271 -HKDV-VSGLAWRGDPQLFIASSRVS-----IIPRAKN 301 (330)
Q Consensus 271 -~~~~-v~~~~~~~~~~~l~s~~~dg-----~i~iw~~ 301 (330)
.... -.+++. -++++++.|+.++ .+.+|+.
T Consensus 240 ~p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~ 276 (301)
T 2vpj_A 240 MTTPRCYVGATV-LRGRLYAIAGYDGNSLLSSIECYDP 276 (301)
T ss_dssp CSSCCBSCEEEE-ETTEEEEECCBCSSSBEEEEEEEET
T ss_pred CCCcccceeEEE-ECCEEEEEcCcCCCcccccEEEEcC
Confidence 1111 112222 2677778887653 3555554
No 319
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.81 E-value=0.025 Score=53.93 Aligned_cols=174 Identities=10% Similarity=0.083 Sum_probs=94.3
Q ss_pred EEEEEeecCceeeeeecC-CCCeEEEE---EcCCCCcEEEEEe----------cCCcEEEEecCCCccceeeeccCCCCe
Q psy6213 122 MRLFDIRCQESTKIFHSN-TESVRDVE---FNPHSPYAFASVS----------ENGTIQQWDVRRPEKCFYQFTAHSGPI 187 (330)
Q Consensus 122 i~i~d~~~~~~~~~~~~~-~~~v~~~~---~~~~~~~~~~~~~----------~dg~i~i~d~~~~~~~~~~~~~~~~~i 187 (330)
|++.|..+.+.+..++-. ...+.+++ |..+.+.++++|+ ..|.|++|++....-........++++
T Consensus 809 i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v 888 (1158)
T 3ei3_A 809 LLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAV 888 (1158)
T ss_dssp EEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCE
T ss_pred EEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcC
Confidence 566666666655554432 23344544 4333334677775 357899999874211111222346788
Q ss_pred EEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceE
Q psy6213 188 FACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLAS 267 (330)
Q Consensus 188 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~ 267 (330)
++++-- +|+ |+++- ...+++|++...+.+.........+..+.....+.+++++-. -..+.++..+.....+..
T Consensus 889 ~al~~~-~g~-Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~---~~Sv~~~~y~~~~~~L~~ 962 (1158)
T 3ei3_A 889 YSMVEF-NGK-LLASI-NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDL---MRSVLLLAYKPMEGNFEE 962 (1158)
T ss_dssp EEEEEE-TTE-EEEEE-TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEES---SBCEEEEEEETTTTEEEE
T ss_pred EEEeee-CCE-EEEEc-CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEh---hheEEEEEEEcCCCeEEE
Confidence 888754 454 44443 368999999866433311111111222222234555444443 555665544322211333
Q ss_pred e--ecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 268 F--TEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 268 ~--~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
+ ..+...++++.+-.+ ..++.+..+|.+.+.+..
T Consensus 963 ~a~D~~~~~vta~~~ld~-~t~l~aD~~gNl~vl~~~ 998 (1158)
T 3ei3_A 963 IARDFNPNWMSAVEILDD-DNFLGAENAFNLFVCQKD 998 (1158)
T ss_dssp EEECCSCBCEEEEEEEET-TEEEEEETTSEEEEEEEC
T ss_pred EEeecccccEEEEEEEcc-CcEEEEcCCCcEEEEecC
Confidence 3 334567888888655 467778999999988643
No 320
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.70 E-value=0.0085 Score=47.90 Aligned_cols=176 Identities=14% Similarity=0.194 Sum_probs=87.4
Q ss_pred CeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCC-----cEEEEECCCCCCCceeEEeccccc
Q psy6213 24 NVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNG-----AVVVWNLGQISRSKQERVFNDHKR 98 (330)
Q Consensus 24 ~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~~~~ 98 (330)
..+..||+.+.+.......+.... . .+++.. ++.+++.|+.++ .+.+||..+. .......+.....
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~-~-----~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~ 100 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRC-R-----AGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKD-QWTSVANMRDRRS 100 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCB-S-----CEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTT-EEEEECCCSSCCB
T ss_pred CcEEEEcCcCCcEeEcccCCcccc-c-----ceEEEE--CCEEEEEeCcCCCccccceEEECCCCC-ceeeCCCCCcccc
Confidence 468889988876544322221111 0 122221 567777777553 5888888762 1222222211111
Q ss_pred ceeEEEEEecCCCEEEEEecCC-----cEEEEEeecCceeee--eecCCCCeEEEEEcCCCCcEEEEEecC-------Cc
Q psy6213 99 TVNKVSFHYVESNWLISGSQDG-----TMRLFDIRCQESTKI--FHSNTESVRDVEFNPHSPYAFASVSEN-------GT 164 (330)
Q Consensus 99 ~i~~i~~~~~~~~~l~~~~~d~-----~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~d-------g~ 164 (330)
. .+++.. ++.+++.|+.++ .+.+||+.+.+-... +....... +++.. ++. +++.|+.+ ..
T Consensus 101 ~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~~-~~~-iyv~GG~~~~~~~~~~~ 174 (302)
T 2xn4_A 101 T-LGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSV-GVGVV-GGL-LYAVGGYDVASRQCLST 174 (302)
T ss_dssp S-CEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSC-EEEEE-TTE-EEEECCEETTTTEECCC
T ss_pred c-eEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCc-eEEEE-CCE-EEEEeCCCCCCCccccE
Confidence 1 222222 677778887653 477888776543322 11111111 22222 343 67776543 35
Q ss_pred EEEEecCCCcc-ceeeeccCCCCeEEEEEcCCCCEEEEEecC-----CcEEEEeCCCC
Q psy6213 165 IQQWDVRRPEK-CFYQFTAHSGPIFACDWHPEHAWLATASRD-----KTIKVWDLSIK 216 (330)
Q Consensus 165 i~i~d~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~ 216 (330)
+.+||+.+..- .+..+.........+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 175 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 175 VECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp EEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred EEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCC
Confidence 88899876321 11111111111122222 57777887764 36889998765
No 321
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.63 E-value=0.019 Score=47.60 Aligned_cols=144 Identities=8% Similarity=0.146 Sum_probs=92.0
Q ss_pred CCCEEEEEecCCcEEEEEeecCceeeeeecC----CCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccc--------
Q psy6213 109 ESNWLISGSQDGTMRLFDIRCQESTKIFHSN----TESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC-------- 176 (330)
Q Consensus 109 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~-------- 176 (330)
++..++.+- ++.||.-++......+.++.. -..+..+..+|+|. +++..+ +..|.+..+..+...
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~-lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGD-LLCLFN-DNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSS-EEEEEC-SSEEEEEECCTTCSCCCCHHHHH
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCC-EEEEec-CCeEEEEEecCccccCccccccc
Confidence 555555554 467777777644445555543 23688899999998 455544 568899888732110
Q ss_pred ---eeeecc------CCCCeEEEEEcC---CCCEEEEEecCCcEEEEeCCCCcc-ccce------e---ccccceEEEEE
Q psy6213 177 ---FYQFTA------HSGPIFACDWHP---EHAWLATASRDKTIKVWDLSIKPS-LEYS------I---NTIASVSRIKW 234 (330)
Q Consensus 177 ---~~~~~~------~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~-~~~~------~---~~~~~v~~~~~ 234 (330)
.+.+.- ...+|..+.|+| .+..|++-..|+.|++||+..... .... . .....+.+++|
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEE
Confidence 112221 246799999999 456899999999999999986321 1100 0 11256889999
Q ss_pred cCCCCeEEEEeecccCCeEEEE
Q psy6213 235 RPQRKFHLASCSLVVDSSVNVW 256 (330)
Q Consensus 235 ~~~~~~l~~~~~~~~~~~i~i~ 256 (330)
.+++-.|.+... ..+|.|+-.
T Consensus 188 g~~~lTLYvl~~-t~~GDIYAl 208 (452)
T 3pbp_A 188 SKDGLTLYCLNT-TEGGDIFAF 208 (452)
T ss_dssp CTTSSCEEEEEC-TTSCEEEEE
T ss_pred cCCCcEEEEEec-CCCCCEEEE
Confidence 998877666442 036777653
No 322
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.61 E-value=0.012 Score=44.16 Aligned_cols=173 Identities=8% Similarity=-0.052 Sum_probs=93.5
Q ss_pred CCEEEEEecCCcEEEEEeecCce------eeeeec-CCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeecc
Q psy6213 110 SNWLISGSQDGTMRLFDIRCQES------TKIFHS-NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA 182 (330)
Q Consensus 110 ~~~l~~~~~d~~i~i~d~~~~~~------~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~ 182 (330)
..+|++...| +++.=....+.. ...+-. .=..+..++|+|++. +.++ .+|.++-.+..+.. ...-+.
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~-~~~W~~- 77 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHD-NDNWMG- 77 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSC-EEEE--ETTEEEEESCCCST-TCCHHH-
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCcc-EEEE--eCCeEEEECCCCCC-cccccc-
Confidence 4456666666 555443333321 111111 123677999999886 5555 78887777765421 111111
Q ss_pred CCCC--------eEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceec-------cccceEEEEEcCCCCeEEEEeec
Q psy6213 183 HSGP--------IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSIN-------TIASVSRIKWRPQRKFHLASCSL 247 (330)
Q Consensus 183 ~~~~--------i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-------~~~~v~~~~~~~~~~~l~~~~~~ 247 (330)
.... -..+.|.|+|.+.++ .||.|+-++..+......... .=..+..+.+.|+|.. .+..
T Consensus 78 s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~L-yav~-- 152 (236)
T 1tl2_A 78 RAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYL-YAVH-- 152 (236)
T ss_dssp HCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCE-EEEE--
T ss_pred cccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceE-EEEe--
Confidence 1122 368899999987777 669998887644322111111 1146799999999984 4433
Q ss_pred ccCCeEEEEEccCCCc----c-ceEee-cCCCCeEEEEEecCCCEEEEeecCCeEe
Q psy6213 248 VVDSSVNVWDIRRPYI----P-LASFT-EHKDVVSGLAWRGDPQLFIASSRVSIIP 297 (330)
Q Consensus 248 ~~~~~i~i~d~~~~~~----~-~~~~~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~ 297 (330)
++.++-........ . ...+. ..-..-..+.|.|++.+.+.. +|.++
T Consensus 153 --dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~~Y 204 (236)
T 1tl2_A 153 --GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGKFY 204 (236)
T ss_dssp --TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred --CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCeEE
Confidence 55544322221110 0 11111 222344557799999877766 77444
No 323
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.58 E-value=0.015 Score=46.67 Aligned_cols=185 Identities=9% Similarity=0.077 Sum_probs=92.3
Q ss_pred CCCe-eecC-----CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcC----C-----CcEEEE
Q psy6213 15 DNGL-AQPS-----RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGAT----N-----GAVVVW 79 (330)
Q Consensus 15 ~~~~-~~~g-----d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----d-----g~i~iw 79 (330)
++.+ +..| -..+.+||..+++.......+.... . .+++.. ++.+++.|+. + ..+.+|
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~-~-----~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~ 95 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRS-G-----LAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCY 95 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCB-S-----CEEEEE--TTEEEEECCEEEETTEEEECCCEEEE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccc-c-----ceEEEE--CCEEEEECCCcCCCCCCeecceEEEE
Confidence 4555 4444 2578889988876554422221111 0 122222 5677777775 2 358888
Q ss_pred ECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecC-----CcEEEEEeecCceeee--eecCCCCeEEEEEcCCC
Q psy6213 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQD-----GTMRLFDIRCQESTKI--FHSNTESVRDVEFNPHS 152 (330)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~ 152 (330)
|..+. ....+..+...... .+++.. ++.+++.|+.+ ..+.+||..+.+-... +......-..+.+ ++
T Consensus 96 d~~~~-~W~~~~~~p~~r~~-~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~ 169 (308)
T 1zgk_A 96 NPMTN-QWSPCAPMSVPRNR-IGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NR 169 (308)
T ss_dssp ETTTT-EEEECCCCSSCCBT-CEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TT
T ss_pred CCCCC-eEeECCCCCcCccc-cEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CC
Confidence 88762 12222212111111 122222 56777777644 3588888876543222 1111111222222 34
Q ss_pred CcEEEEEecC-----CcEEEEecCCCccc-eeeeccCCCCeEEEEEcCCCCEEEEEecC-----CcEEEEeCCCC
Q psy6213 153 PYAFASVSEN-----GTIQQWDVRRPEKC-FYQFTAHSGPIFACDWHPEHAWLATASRD-----KTIKVWDLSIK 216 (330)
Q Consensus 153 ~~~~~~~~~d-----g~i~i~d~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~ 216 (330)
. +++.|+.+ ..+.+||+.+..-. +..+......-..+.+ ++++++.|+.+ ..+.+||+.+.
T Consensus 170 ~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 170 L-LYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp E-EEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred E-EEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCC
Confidence 3 67777654 45888998763211 1111111111122222 67777777764 46899998776
No 324
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.58 E-value=0.014 Score=46.55 Aligned_cols=225 Identities=9% Similarity=0.098 Sum_probs=104.2
Q ss_pred CCcEEEEEcCC----CcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecC-----CcEEEEEeecCcee
Q psy6213 63 EENHIATGATN----GAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQD-----GTMRLFDIRCQEST 133 (330)
Q Consensus 63 ~~~~l~~~~~d----g~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~ 133 (330)
++.+++.|+.+ ..+..||+.+. ....+..+..... -.+++.. ++.+++.|+.+ ..+.+||..+.+-.
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~-~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~ 90 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEE-RWHQVAELPSRRC-RAGMVYM--AGLVFAVGGFNGSLRVRTVDSYDPVKDQWT 90 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTT-EEEEECCCSSCCB-SCEEEEE--TTEEEEESCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCC-cEeEcccCCcccc-cceEEEE--CCEEEEEeCcCCCccccceEEECCCCCcee
Confidence 34566666643 35788888762 1222211111111 1122222 67777777754 35888888766432
Q ss_pred ee--eecCCCCeEEEEEcCCCCcEEEEEecCC-----cEEEEecCCCcc-ceeeeccCCCCeEEEEEcCCCCEEEEEecC
Q psy6213 134 KI--FHSNTESVRDVEFNPHSPYAFASVSENG-----TIQQWDVRRPEK-CFYQFTAHSGPIFACDWHPEHAWLATASRD 205 (330)
Q Consensus 134 ~~--~~~~~~~v~~~~~~~~~~~~~~~~~~dg-----~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 205 (330)
.. +.........+.+ ++. +++.|+.++ .+.+||+.+..- .+..+....... +++. -++++++.|+.+
T Consensus 91 ~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~ 165 (302)
T 2xn4_A 91 SVANMRDRRSTLGAAVL--NGL-LYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSV-GVGV-VGGLLYAVGGYD 165 (302)
T ss_dssp EECCCSSCCBSCEEEEE--TTE-EEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSC-EEEE-ETTEEEEECCEE
T ss_pred eCCCCCccccceEEEEE--CCE-EEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCc-eEEE-ECCEEEEEeCCC
Confidence 22 1111111222222 344 777777653 477888876321 111111111111 2222 256777777643
Q ss_pred -------CcEEEEeCCCCccccc-eec-cccceEEEEEcCCCCeEEEEeeccc---CCeEEEEEccCCCccceEeecCCC
Q psy6213 206 -------KTIKVWDLSIKPSLEY-SIN-TIASVSRIKWRPQRKFHLASCSLVV---DSSVNVWDIRRPYIPLASFTEHKD 273 (330)
Q Consensus 206 -------g~i~i~d~~~~~~~~~-~~~-~~~~v~~~~~~~~~~~l~~~~~~~~---~~~i~i~d~~~~~~~~~~~~~~~~ 273 (330)
..+.+||+.+.+-... ..+ .......+.+ +++. ++.++... ...+.+||+.+..- ..+.....
T Consensus 166 ~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i-yv~GG~~~~~~~~~~~~yd~~~~~W--~~~~~~~~ 240 (302)
T 2xn4_A 166 VASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLL-YAVGGHDGPLVRKSVEVYDPTTNAW--RQVADMNM 240 (302)
T ss_dssp TTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEE-EEECCBSSSSBCCCEEEEETTTTEE--EEECCCSS
T ss_pred CCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEE-EEECCCCCCcccceEEEEeCCCCCE--eeCCCCCC
Confidence 3588999876521111 111 1112222222 4454 44443101 24788999887642 22211111
Q ss_pred --CeEEEEEecCCCEEEEeecCCe-----Eeeeecc
Q psy6213 274 --VVSGLAWRGDPQLFIASSRVSI-----IPRAKNI 302 (330)
Q Consensus 274 --~v~~~~~~~~~~~l~s~~~dg~-----i~iw~~~ 302 (330)
.-.+++. -++++++.|+.++. +.+|+..
T Consensus 241 ~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 241 CRRNAGVCA-VNGLLYVVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp CCBSCEEEE-ETTEEEEECCBCSSSBCCCEEEEETT
T ss_pred ccccCeEEE-ECCEEEEECCcCCCcccccEEEEcCC
Confidence 1111222 26778888876643 5666544
No 325
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.57 E-value=0.018 Score=46.12 Aligned_cols=225 Identities=10% Similarity=0.031 Sum_probs=105.9
Q ss_pred CcEEEEEcCC--CcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecC----CcEEEEEeecCceeeee-
Q psy6213 64 ENHIATGATN--GAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQD----GTMRLFDIRCQESTKIF- 136 (330)
Q Consensus 64 ~~~l~~~~~d--g~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d----~~i~i~d~~~~~~~~~~- 136 (330)
+.+++.|+.+ ..+.+||..+. +...+..+...... .+++.. ++.+++.|+.+ ..+.+||..+.+-...-
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~-~W~~~~~~p~~r~~-~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDY-SWTDIRCPFEKRRD-AACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTT-EEEECCCCSCCCBS-CEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC
T ss_pred ceEEEEeCCCCCceEEEecCCCC-CEecCCCCCcccce-eEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC
Confidence 4456666643 56888998762 12222222111111 122222 67777888755 57888998776533221
Q ss_pred -ecCCCCeEEEEEcCCCCcEEEEEecC------CcEEEEecCCCcc-ceeeeccCCCCeEEEEEcCCCCEEEEEec----
Q psy6213 137 -HSNTESVRDVEFNPHSPYAFASVSEN------GTIQQWDVRRPEK-CFYQFTAHSGPIFACDWHPEHAWLATASR---- 204 (330)
Q Consensus 137 -~~~~~~v~~~~~~~~~~~~~~~~~~d------g~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~---- 204 (330)
.........+.+ ++. +++.|+.+ ..+.+||..+..- .+..+......-..+.+ ++++++.|+.
T Consensus 88 ~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 162 (306)
T 3ii7_A 88 PPTPRDSLAACAA--EGK-IYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNN 162 (306)
T ss_dssp CSSCCBSCEEEEE--TTE-EEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCT
T ss_pred CCccccceeEEEE--CCE-EEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCC
Confidence 111111222222 444 67777755 4588899876321 11111111111112222 5677777763
Q ss_pred -----CCcEEEEeCCCCccccc-eecc-ccceEEEEEcCCCCeEEEEeeccc---CCeEEEEEccCCCc-cceEeecCCC
Q psy6213 205 -----DKTIKVWDLSIKPSLEY-SINT-IASVSRIKWRPQRKFHLASCSLVV---DSSVNVWDIRRPYI-PLASFTEHKD 273 (330)
Q Consensus 205 -----dg~i~i~d~~~~~~~~~-~~~~-~~~v~~~~~~~~~~~l~~~~~~~~---~~~i~i~d~~~~~~-~~~~~~~~~~ 273 (330)
-..+.+||+.+.+-... ..+. ......+.+ +++.+++++. .. -..+.+||+.+..- .+..+.....
T Consensus 163 ~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~-~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~ 239 (306)
T 3ii7_A 163 VSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQ-NGLGGLDNVEYYDIKLNEWKMVSPMPWKGV 239 (306)
T ss_dssp TTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCE-ETTEEBCCEEEEETTTTEEEECCCCSCCBS
T ss_pred CcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCC-CCCCCCceEEEeeCCCCcEEECCCCCCCcc
Confidence 34588999877622111 1111 112222222 4554344332 11 24688999887642 0111111111
Q ss_pred CeEEEEEecCCCEEEEeecC-----CeEeeeecc
Q psy6213 274 VVSGLAWRGDPQLFIASSRV-----SIIPRAKNI 302 (330)
Q Consensus 274 ~v~~~~~~~~~~~l~s~~~d-----g~i~iw~~~ 302 (330)
....+.+ ++++++.|+.+ ..+.+|+..
T Consensus 240 ~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~ 271 (306)
T 3ii7_A 240 TVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTE 271 (306)
T ss_dssp CCEEEEE--TTEEEEEECBCSSSBCCEEEEEETT
T ss_pred ceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCC
Confidence 1222223 67788888755 345555543
No 326
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.48 E-value=0.061 Score=49.15 Aligned_cols=260 Identities=10% Similarity=0.061 Sum_probs=143.5
Q ss_pred ccceEEEEeeCCCe-eecCCCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCC
Q psy6213 5 SPVHKHGLKADNGL-AQPSRNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQ 83 (330)
Q Consensus 5 ~~v~~~~~s~~~~~-~~~gd~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~ 83 (330)
..|+++.-.++|.+ +.+.+| +..||-..-+ .+... .. .....|.++.-.. ...|..|+.+| +..||..+
T Consensus 22 n~V~~I~qD~~G~lWigT~~G-L~ryDG~~~~---~~~~~-~~--~~~~~i~~i~~d~--~g~lWigT~~G-l~~yd~~~ 91 (758)
T 3ott_A 22 SVVSCFLQDSEGLIWIGSNKG-LFSYDGYSTQ---QHFTY-GE--NNNTRIYCGVIID--NTYLYMGTDNG-ILVYNYRA 91 (758)
T ss_dssp CCEEEEEECTTSCEEEEESSC-EEEECSSCEE---ECSCT-TS--TTSSCEEEEEEET--TTEEEEEETTE-EEEEETTT
T ss_pred ceEEEEEECCCCCEEEEECCC-ccccCCCceE---EEEcc-CC--CCCceEEEEEEcC--CCcEEEEeCCC-eEEEeCCC
Confidence 46888888888877 544355 4556532211 11111 00 1122356666554 45666676665 78899876
Q ss_pred CCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeee-----cCCCCeEEEEEcCCCCcEEEE
Q psy6213 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFH-----SNTESVRDVEFNPHSPYAFAS 158 (330)
Q Consensus 84 ~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~~~~~ 158 (330)
.............|.++... ++ .|..++.+ -+..+|..+++.. .+. .....|.++...+++. +..
T Consensus 92 ---~~f~~~~~~~~~~i~~i~~~--~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~--lWi 161 (758)
T 3ott_A 92 ---DRYEQPETDFPTDVRTMALQ--GD-TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQ--IYV 161 (758)
T ss_dssp ---TEECCCSCCCCSCEEEEEEE--TT-EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCC--EEE
T ss_pred ---CEEECcccCCCceEEEEEec--CC-cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCC--EEE
Confidence 22211111122346666532 44 46566655 6888887655432 221 1235688888887776 444
Q ss_pred EecCCcEEEEecCCCccceeeecc----CCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEE
Q psy6213 159 VSENGTIQQWDVRRPEKCFYQFTA----HSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKW 234 (330)
Q Consensus 159 ~~~dg~i~i~d~~~~~~~~~~~~~----~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 234 (330)
++.+ -+..+|..+.......... ....|.++...+++..|..|+. +-+..+|..+.+...........|.++..
T Consensus 162 gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~ 239 (758)
T 3ott_A 162 GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLAL 239 (758)
T ss_dssp EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEE
T ss_pred EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEE
Confidence 5554 4778887652211111111 1234788888777776666664 45888887765322211112356888888
Q ss_pred cCCCCeEEEEeecccCCeEEEEEccCCCccceEee--------cCCCCeEEEEEecCCCEEEEeecCC
Q psy6213 235 RPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFT--------EHKDVVSGLAWRGDPQLFIASSRVS 294 (330)
Q Consensus 235 ~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~s~~~dg 294 (330)
.++|.. .++. ++-+.+++..+... ..+. -....|.++...++|.+-+ |+..|
T Consensus 240 d~~g~l-WigT----~~Gl~~~~~~~~~~--~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-GT~~G 299 (758)
T 3ott_A 240 DGNGDL-LAGT----DNGLYVYHNDTTPL--QHIIHDSRNIQSLTNNIIWNIFADQEHNIWL-GTDYG 299 (758)
T ss_dssp CTTCCE-EEEE----TTEEEEECCTTSCC--EEECCCTTCTTSCSCSCEEEEEECTTCCEEE-EESSS
T ss_pred cCCCCE-EEEe----CCceeEEecCCCcE--EEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE-EeCCc
Confidence 888875 3333 34578888766542 2221 1224688998887776554 44556
No 327
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.36 E-value=0.042 Score=45.00 Aligned_cols=97 Identities=7% Similarity=0.005 Sum_probs=47.0
Q ss_pred eeCCCe-eecC--CCeEEEEEcCC--cceeeeeceeeccccccccceeeeeecccCCcEEEEEcC-C---------CcEE
Q psy6213 13 KADNGL-AQPS--RNVFKIFLIKD--TEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGAT-N---------GAVV 77 (330)
Q Consensus 13 s~~~~~-~~~g--d~~i~iw~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-d---------g~i~ 77 (330)
.-++++ +..| ...+.+||..+ .+.......+..... . .+++.. ++.+++.|+. + ..+.
T Consensus 17 ~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~----~-~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~ 89 (357)
T 2uvk_A 17 IDNDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRD----Q-ATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVH 89 (357)
T ss_dssp EETTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCB----S-CEEEEE--TTEEEEECCEEECTTSCEEECCCEE
T ss_pred EECCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCc----c-ceEEEE--CCEEEEEcCCCCCCCccceeeccEE
Confidence 336666 6666 66888899874 333332222200110 0 122222 5677777776 2 3588
Q ss_pred EEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecC
Q psy6213 78 VWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQD 119 (330)
Q Consensus 78 iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d 119 (330)
+||..+. ....+.........-.++.. . ++.+++.|+.+
T Consensus 90 ~yd~~~~-~W~~~~~~~p~~r~~~~~~~-~-~~~iyv~GG~~ 128 (357)
T 2uvk_A 90 KYNPKTN-SWVKLMSHAPMGMAGHVTFV-H-NGKAYVTGGVN 128 (357)
T ss_dssp EEETTTT-EEEECSCCCSSCCSSEEEEE-E-TTEEEEEECCC
T ss_pred EEeCCCC-cEEECCCCCCcccccceEEE-E-CCEEEEEeCcC
Confidence 8998762 12222211101111112222 2 67888888754
No 328
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.34 E-value=0.062 Score=46.21 Aligned_cols=120 Identities=9% Similarity=0.054 Sum_probs=76.0
Q ss_pred CeEEEEEcCCCCcEEEEEecCCcEEEEecCCCcc-----------c-eeeeccCCCCeEEEEEcCCCCEEEEEecCCcEE
Q psy6213 142 SVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEK-----------C-FYQFTAHSGPIFACDWHPEHAWLATASRDKTIK 209 (330)
Q Consensus 142 ~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~-----------~-~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 209 (330)
....+..+|+|+++++++--+.++.++|+++-.. . ....+ -.-.....+|.++|....+.--|.+|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEE
Confidence 3456789999999888888899999999884211 1 11122 234567889999996566666899999
Q ss_pred EEeCCCC------c---cccceeccccceEEEEE------cCCCCeEEEEeecccCC----------eEEEEEccCCC
Q psy6213 210 VWDLSIK------P---SLEYSINTIASVSRIKW------RPQRKFHLASCSLVVDS----------SVNVWDIRRPY 262 (330)
Q Consensus 210 i~d~~~~------~---~~~~~~~~~~~v~~~~~------~~~~~~l~~~~~~~~~~----------~i~i~d~~~~~ 262 (330)
-|++... + .+.....-...+-.+.- .|+|++|++....+.|. .-++.|+...+
T Consensus 403 kWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidIsGdk 480 (638)
T 3sbq_A 403 KWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDISGDE 480 (638)
T ss_dssp EEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEECSSSS
T ss_pred EEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEecCCCc
Confidence 9998653 1 12222222223333332 67889877666533443 34677886654
No 329
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.32 E-value=0.12 Score=49.31 Aligned_cols=220 Identities=10% Similarity=0.020 Sum_probs=116.3
Q ss_pred CcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecC-----CCEEEEEec-CCcEEEEEeecCceeeeee
Q psy6213 64 ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVE-----SNWLISGSQ-DGTMRLFDIRCQESTKIFH 137 (330)
Q Consensus 64 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~-----~~~l~~~~~-d~~i~i~d~~~~~~~~~~~ 137 (330)
+.+++.++ ++.+.+++++.. ....... ..-...|.|+++.|.. ..++++|.. |++++++++.+.+.+....
T Consensus 523 ~~~vvva~-g~~l~~fel~~~-~L~~~~~-~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~ 599 (1158)
T 3ei3_A 523 SSQVVVAV-GRALYYLQIHPQ-ELRQISH-TEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEM 599 (1158)
T ss_dssp SSEEEEEE-TTEEEEEEEETT-EEEEEEE-EECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEE-CCEEEEEEeeCC-ceeeecc-cCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEE
Confidence 34566664 577888877651 1122222 2235689999987622 478999996 9999999998766554433
Q ss_pred cC-CCCeEEEEEcC-CCCcEEEEEecCCcEEEEecCCC-cccee---eeccCCCCeEEEEEcCCCCEEEEEecCCcEEEE
Q psy6213 138 SN-TESVRDVEFNP-HSPYAFASVSENGTIQQWDVRRP-EKCFY---QFTAHSGPIFACDWHPEHAWLATASRDKTIKVW 211 (330)
Q Consensus 138 ~~-~~~v~~~~~~~-~~~~~~~~~~~dg~i~i~d~~~~-~~~~~---~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~ 211 (330)
-. .....++.+.. .+...+..|-.||.+..+.+... +.... .+-+ ..++.-..+...+..-+.+..+....+|
T Consensus 600 L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy 678 (1158)
T 3ei3_A 600 LGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIY 678 (1158)
T ss_dssp CCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEE
T ss_pred CCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEE
Confidence 21 22344444332 22234778888998876655421 12111 1222 3344444444344333333334455555
Q ss_pred eCCCCccccceeccccceEEEEEcCC--CCeEEEEeecccCCeEEEEEccCCCc-cceEeecCCCCeEEEEEecCCCEEE
Q psy6213 212 DLSIKPSLEYSINTIASVSRIKWRPQ--RKFHLASCSLVVDSSVNVWDIRRPYI-PLASFTEHKDVVSGLAWRGDPQLFI 288 (330)
Q Consensus 212 d~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~~~~~~~i~i~d~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~ 288 (330)
--+.. ..........--....|+.. ..-++ ..+ ++.++|..+.+... ....+. -...+..++++|+.+.++
T Consensus 679 ~~~~~-l~~s~l~~~~v~~~~~F~se~~~~g~v-~~~---~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~ 752 (1158)
T 3ei3_A 679 SSNHK-LVFSNVNLKEVNYMCPLNSDGYPDSLA-LAN---NSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFG 752 (1158)
T ss_dssp ESSSS-EEEEEBSSSCCCEEEEECCSSSTTEEE-EEC---SSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEE
T ss_pred EcCCc-eEEeccChHHhceEeccCcccCCCcEE-EEc---CCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEE
Confidence 43321 11111111111233445432 12234 343 56699998865432 222332 346789999999888776
Q ss_pred EeecC
Q psy6213 289 ASSRV 293 (330)
Q Consensus 289 s~~~d 293 (330)
.+..+
T Consensus 753 v~~~~ 757 (1158)
T 3ei3_A 753 VLSSR 757 (1158)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66543
No 330
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.29 E-value=0.021 Score=45.82 Aligned_cols=225 Identities=7% Similarity=-0.012 Sum_probs=105.0
Q ss_pred CCcEEEEEcCC----CcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEec----C-----CcEEEEEeec
Q psy6213 63 EENHIATGATN----GAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQ----D-----GTMRLFDIRC 129 (330)
Q Consensus 63 ~~~~l~~~~~d----g~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~----d-----~~i~i~d~~~ 129 (330)
++.+++.|+.+ ..+.+||..+. +...+..+..... -.+++.. ++.+++.|+. + ..+.+||..+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~-~W~~~~~~p~~r~-~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~ 99 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNG-TWLRLADLQVPRS-GLAGCVV--GGLLYAVGGRNNSPDGNTDSSALDCYNPMT 99 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTT-EEEECCCCSSCCB-SCEEEEE--TTEEEEECCEEEETTEEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCC-eEeECCCCCcccc-cceEEEE--CCEEEEECCCcCCCCCCeecceEEEECCCC
Confidence 56677777642 35888888761 1222211111111 1122222 5677777765 2 4688888876
Q ss_pred Cceeee--eecCCCCeEEEEEcCCCCcEEEEEecC-----CcEEEEecCCCcc-ceeeeccCCCCeEEEEEcCCCCEEEE
Q psy6213 130 QESTKI--FHSNTESVRDVEFNPHSPYAFASVSEN-----GTIQQWDVRRPEK-CFYQFTAHSGPIFACDWHPEHAWLAT 201 (330)
Q Consensus 130 ~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~d-----g~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~ 201 (330)
.+-... +.........+.+ ++. +++.|+.+ ..+.+||+.+..- .+..+......-..+.+ ++++++.
T Consensus 100 ~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~ 174 (308)
T 1zgk_A 100 NQWSPCAPMSVPRNRIGVGVI--DGH-IYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAV 174 (308)
T ss_dssp TEEEECCCCSSCCBTCEEEEE--TTE-EEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEE
T ss_pred CeEeECCCCCcCccccEEEEE--CCE-EEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEE
Confidence 543222 1111112222222 344 67776643 3588899876321 11111111111122222 5677777
Q ss_pred EecC-----CcEEEEeCCCCccccc-eec-cccceEEEEEcCCCCeEEEEeeccc---CCeEEEEEccCCCccceEeecC
Q psy6213 202 ASRD-----KTIKVWDLSIKPSLEY-SIN-TIASVSRIKWRPQRKFHLASCSLVV---DSSVNVWDIRRPYIPLASFTEH 271 (330)
Q Consensus 202 ~~~d-----g~i~i~d~~~~~~~~~-~~~-~~~~v~~~~~~~~~~~l~~~~~~~~---~~~i~i~d~~~~~~~~~~~~~~ 271 (330)
|+.+ ..+.+||+.+.+-... ..+ .......+.+ +++ +++.++... -..+.+||+.+..- ..+...
T Consensus 175 GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W--~~~~~~ 249 (308)
T 1zgk_A 175 GGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNC-IYAAGGYDGQDQLNSVERYDVETETW--TFVAPM 249 (308)
T ss_dssp CCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEETTTTEE--EECCCC
T ss_pred eCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCE-EEEEeCCCCCCccceEEEEeCCCCcE--EECCCC
Confidence 7754 4588999876521111 111 1112223333 455 444443101 25789999887642 111111
Q ss_pred C--CCeEEEEEecCCCEEEEeecCC-----eEeeeecc
Q psy6213 272 K--DVVSGLAWRGDPQLFIASSRVS-----IIPRAKNI 302 (330)
Q Consensus 272 ~--~~v~~~~~~~~~~~l~s~~~dg-----~i~iw~~~ 302 (330)
. ..-.+++. -++++++.|+.++ .+.+|+..
T Consensus 250 p~~r~~~~~~~-~~~~i~v~GG~~~~~~~~~v~~yd~~ 286 (308)
T 1zgk_A 250 KHRRSALGITV-HQGRIYVLGGYDGHTFLDSVECYDPD 286 (308)
T ss_dssp SSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETT
T ss_pred CCCccceEEEE-ECCEEEEEcCcCCCcccceEEEEcCC
Confidence 1 11112222 2677788887654 34555543
No 331
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.29 E-value=0.047 Score=43.85 Aligned_cols=179 Identities=7% Similarity=-0.019 Sum_probs=87.2
Q ss_pred CCCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcC----C-------CcEEEEECCCCCCCcee
Q psy6213 22 SRNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGAT----N-------GAVVVWNLGQISRSKQE 90 (330)
Q Consensus 22 gd~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----d-------g~i~iw~~~~~~~~~~~ 90 (330)
|...+.+||..+++... ........ ..-.+++. . ++.+++.|+. + ..+..||..+. +...+
T Consensus 11 GG~~~~~yd~~~~~W~~-~~~~~p~~----r~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~-~W~~~ 82 (315)
T 4asc_A 11 SEEGAVAYDPAANECYC-ASLSSQVP----KNHVSLVT-K-ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDS-EWLGM 82 (315)
T ss_dssp ETTEEEEEETTTTEEEE-EECCCCSC----SSEEEEEC-T-TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTT-EEEEC
T ss_pred cCCceEEECCCCCeEec-CCCCCCCC----ccceEEEE-E-CCEEEEEcCcccCCCCCccccccceEEecCCCC-eEEEC
Confidence 34678899999877543 22111000 00122222 2 6777777773 1 12677887761 11221
Q ss_pred EEecccccceeEEEEEecCCCEEEEEecC--------CcEEEEEeecCceeee--eecCCCCeEEEEEcCCCCcEEEEEe
Q psy6213 91 RVFNDHKRTVNKVSFHYVESNWLISGSQD--------GTMRLFDIRCQESTKI--FHSNTESVRDVEFNPHSPYAFASVS 160 (330)
Q Consensus 91 ~~~~~~~~~i~~i~~~~~~~~~l~~~~~d--------~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~~~~~~~ 160 (330)
..+..... -.+++.. ++.+++.|+.+ ..+.+||..+.+-... +....... +++. -++. +++.|+
T Consensus 83 ~~~p~~r~-~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~-iyv~GG 156 (315)
T 4asc_A 83 PPLPSPRC-LFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH-TVLS-HMDL-VYVIGG 156 (315)
T ss_dssp CCBSSCEE-SCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTE-EEEECC
T ss_pred CCCCcchh-ceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce-eEEE-ECCE-EEEEeC
Confidence 11111111 1122222 56777777743 4588899876643221 11111111 2222 3344 677777
Q ss_pred c-C-----CcEEEEecCCCcc-ceeeeccCCCCeEEEEEcCCCCEEEEEecCC-----cEEEEeCCCC
Q psy6213 161 E-N-----GTIQQWDVRRPEK-CFYQFTAHSGPIFACDWHPEHAWLATASRDK-----TIKVWDLSIK 216 (330)
Q Consensus 161 ~-d-----g~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~ 216 (330)
. + ..+.+||+.+..= .+..+......-..+.+ ++++++.|+.++ .+.+||+.+.
T Consensus 157 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp BCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCC
Confidence 5 2 4688999876321 11111111111122222 677888887654 4888998776
No 332
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.28 E-value=0.011 Score=44.32 Aligned_cols=133 Identities=7% Similarity=-0.048 Sum_probs=77.5
Q ss_pred cEEEEEecCCcEEEEecCCCcc-----ceeeeccC--CCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccc
Q psy6213 154 YAFASVSENGTIQQWDVRRPEK-----CFYQFTAH--SGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTI 226 (330)
Q Consensus 154 ~~~~~~~~dg~i~i~d~~~~~~-----~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 226 (330)
++|+...+| +++.=.+..... ....+ +. -..+..++|+|+|.+.++ .+|.+.-.+..+...... ....
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~i-G~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W-~~s~ 79 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKNDNWLARATLI-GKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNW-MGRA 79 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTTCCHHHHSEEE-ESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCH-HHHC
T ss_pred eEEEEEeCC-cEEecCCCCCcccchhhhcccc-CccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccc-cccc
Confidence 366777777 655554443221 01111 12 246779999999987666 678777777654322111 1112
Q ss_pred cc--------eEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCcc-----ceEeec-CCCCeEEEEEecCCCEEEEeec
Q psy6213 227 AS--------VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIP-----LASFTE-HKDVVSGLAWRGDPQLFIASSR 292 (330)
Q Consensus 227 ~~--------v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~-----~~~~~~-~~~~v~~~~~~~~~~~l~s~~~ 292 (330)
.. ...+.|.|+|.. .++ + ||.|+-++-.+.... -..+-. -=..+..+.+.|+|.+-+..
T Consensus 80 t~IG~~Gw~~F~a~~fD~~G~L-Yav-~---dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-- 152 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDPNGYL-YAV-S---KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-- 152 (236)
T ss_dssp EEEECSCGGGCSEEEECTTSCE-EEE-E---TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--
T ss_pred cEecccccccceEEEECCCCCE-EEe-C---CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--
Confidence 23 378999999985 555 6 799987775332210 011111 11467999999999876665
Q ss_pred CCeEee
Q psy6213 293 VSIIPR 298 (330)
Q Consensus 293 dg~i~i 298 (330)
|+.++-
T Consensus 153 dg~lyr 158 (236)
T 1tl2_A 153 GQQFYK 158 (236)
T ss_dssp TTEEEE
T ss_pred CCcEEe
Confidence 887543
No 333
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.24 E-value=0.052 Score=43.37 Aligned_cols=198 Identities=8% Similarity=0.071 Sum_probs=103.4
Q ss_pred CCcEEEEEc--CCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecC--------------CcEEEEE
Q psy6213 63 EENHIATGA--TNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQD--------------GTMRLFD 126 (330)
Q Consensus 63 ~~~~l~~~~--~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d--------------~~i~i~d 126 (330)
++..++... .++.|...+.+. .....+... .+ --+++ +++.|+-+... ..|+..+
T Consensus 24 ~g~~iy~~n~~d~~~ly~~~~dg----~~~~~l~~~--~~--~~i~~-~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~ 94 (302)
T 3s25_A 24 SDGEVFFSNTNDNGRLYAMNIDG----SNIHKLSND--TA--MYINA-DKNYVYYVRNNNQKITSQTFFSYDRNSLCRIK 94 (302)
T ss_dssp ETTEEEEEEGGGTTEEEEEETTS----CSCEEEEEE--EE--EEEEE-CSSEEEEEEECC------CCSSCCSEEEEEEE
T ss_pred eCCEEEEEeCCCCceEEEEcCCC----CCCEEccCC--ce--eeEEE-cCCEEEEEECCCCcccccceeccCCCeEEEEe
Confidence 555555543 245555555543 222222221 22 34466 66666655442 3567777
Q ss_pred eecCceeeeeecCCCCeEEEEEcCCCCcEEEEE---ecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEe
Q psy6213 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASV---SENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS 203 (330)
Q Consensus 127 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~---~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~ 203 (330)
+...+.. .+... . ...|++++++++.+- ..+..|+..++. +.....+..+.. ..++|+++.|+-.+
T Consensus 95 ~dg~~~~-~l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d--Gs~~~~lt~~~~----~~~~~~g~~iy~t~ 163 (302)
T 3s25_A 95 RNGHGST-VLDPD--P--CIYASLIGNYIYYLHYDTQTATSLYRIRID--GEEKKKIKNHYL----FTCNTSDRYFYYNN 163 (302)
T ss_dssp TTSCCCE-EEECS--C--EEEEEEETTEEEEEEESSSSCEEEEEEETT--SCCCEEEESSCC----CCSEEETTEEEEEC
T ss_pred CCCCcce-EeecC--C--ccEEEEeCCEEEEEeecCCCCceEEEEECC--CCCeEEEeCCCc----eEeeEECCEEEEEe
Confidence 7655432 23211 1 236778888655544 233445555555 333444443332 45677788777665
Q ss_pred c-CCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEec
Q psy6213 204 R-DKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRG 282 (330)
Q Consensus 204 ~-dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~ 282 (330)
. ...|...++........ .. .... ..+.|++.+|+.+... ....|..-++..... ..+.. ..+ ..|+|
T Consensus 164 ~g~~~Iy~~~l~g~~~~~l-~~--~~~~-~~~~P~g~~iy~t~~~-~~~~I~~~~ldG~~~--~~Lt~--~~~--~~~~~ 232 (302)
T 3s25_A 164 PKNGQLYRYDTASQSEALF-YD--CNCY-KPVVLDDTNVYYMDVN-RDNAIVHVNINNPNP--VVLTE--ANI--EHYNV 232 (302)
T ss_dssp TTTCCEEEEETTTTEEEEE-EC--SCEE-EEEEEETTEEEEEEGG-GTTEEEEECSSSCCC--EECSC--SCE--EEEEE
T ss_pred CCCceEEEEECCCCCEEEE-eC--CCcc-ceeeecCCEEEEEEcC-CCcEEEEEECCCCCe--EEEeC--CCc--ceEEE
Confidence 4 67788888876643222 22 2222 2356999987776541 224677777765542 33322 223 23667
Q ss_pred CCCEEEEee
Q psy6213 283 DPQLFIASS 291 (330)
Q Consensus 283 ~~~~l~s~~ 291 (330)
++.+|.-++
T Consensus 233 ~g~~Iy~~~ 241 (302)
T 3s25_A 233 YGSLIFYQR 241 (302)
T ss_dssp ETTEEEEEE
T ss_pred CCCEEEEEE
Confidence 777776553
No 334
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.23 E-value=0.042 Score=52.75 Aligned_cols=233 Identities=13% Similarity=0.176 Sum_probs=135.5
Q ss_pred EeeCCCeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCcee
Q psy6213 12 LKADNGLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQE 90 (330)
Q Consensus 12 ~s~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 90 (330)
.+|..+.++-- ..++.|+|+++.+....+..... |.-=.|- +.+.|+..+. ..|.-|++... ..+.
T Consensus 73 MnP~~~iiALrag~~lQiFnl~~k~klks~~~~e~--------VvfWkWi--s~~~l~lVT~-~aVyHW~~~~~--s~P~ 139 (1630)
T 1xi4_A 73 MNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDD--------VTFWKWI--SLNTVALVTD-NAVYHWSMEGE--SQPV 139 (1630)
T ss_pred cCCCcceEEEecCCeEEEeehHHhhhhcccccCCC--------ceEEEec--CCCeeEEEcC-CeEEEeccCCC--CccH
Confidence 45666665555 88899999988776665554322 3444665 4555655553 57999999652 3444
Q ss_pred EEeccc----ccceeEEEEEecCCCEEEEEe-------cCCcEEEEEeecCceeeeeecCCCCeEEEEEc--CCCCcEEE
Q psy6213 91 RVFNDH----KRTVNKVSFHYVESNWLISGS-------QDGTMRLFDIRCQESTKIFHSNTESVRDVEFN--PHSPYAFA 157 (330)
Q Consensus 91 ~~~~~~----~~~i~~i~~~~~~~~~l~~~~-------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~~~ 157 (330)
+.+..| ...|..-..++ +.++++..| -.|.+.+|..+.+ ..+.+++|......+... +....+++
T Consensus 140 k~fdR~~~L~~~QIinY~~d~-~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~ 217 (1630)
T 1xi4_A 140 KMFDRHSSLAGCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFC 217 (1630)
T ss_pred HHHhcchhcccCeeEEeeeCC-CCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEE
Confidence 444444 34566666666 566655433 3578899988743 344455665544443332 11222333
Q ss_pred EEec---CCcEEEEecCCC--cccee------eecc---CCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcccccee
Q psy6213 158 SVSE---NGTIQQWDVRRP--EKCFY------QFTA---HSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI 223 (330)
Q Consensus 158 ~~~~---dg~i~i~d~~~~--~~~~~------~~~~---~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 223 (330)
.+.. .+.+++-++..+ +.+.. .+.. -.+-..++..++....+...+.-|.+.+||+.++..+....
T Consensus 218 f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 218 FAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred EEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhcc
Confidence 3322 368899888653 11111 1111 12334567777777788888999999999999997655544
Q ss_pred ccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCC
Q psy6213 224 NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY 262 (330)
Q Consensus 224 ~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~ 262 (330)
-...+|...+-++...-+++.. ..|.|.-..+....
T Consensus 298 is~~~iF~~~~~~~~~g~~~vn---r~G~vl~v~v~~~~ 333 (1630)
T 1xi4_A 298 ISGETIFVTAPHEATAGIIGVN---RKGQVLSVCVEEEN 333 (1630)
T ss_pred ccCCceEEeccCCCCCceEEEc---CCceEEEEEEccch
Confidence 4455555554444433333333 36666666555443
No 335
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=97.09 E-value=0.072 Score=42.09 Aligned_cols=220 Identities=13% Similarity=0.066 Sum_probs=121.2
Q ss_pred eeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCcee
Q psy6213 54 CNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQEST 133 (330)
Q Consensus 54 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 133 (330)
|..++... ...++. . ||.|..|-.....+... -......|..++.. ....++. . ||.|+.|-.+..-.+
T Consensus 26 i~~ia~G~--~h~~~l-~-~G~v~~wG~n~~Gqlg~---p~~~~~~i~~ia~G--~~hs~~l-~-~G~v~~wG~n~~Gql 94 (282)
T 3qhy_B 26 VDAIAGGY--FHGLAL-K-GGKVLGWGANLNGQLTM---PAATQSGVDAIAAG--NYHSLAL-K-DGEVIAWGGNEDGQT 94 (282)
T ss_dssp CCEEEECS--SEEEEE-E-TTEEEEEECCSSSTTSC---CGGGGSCCCEEEEC--SSEEEEE-E-TTEEEEEECCTTSTT
T ss_pred CcEEEeCC--CeEEEE-E-CCEEEEEeCCCCCCCCC---CccCCCCEEEEEeC--CCEEEEE-E-CCEEEEeeCCCCCCC
Confidence 45555543 233333 5 89999998765322111 11223467777754 3344444 4 899999986643222
Q ss_pred eeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeC
Q psy6213 134 KIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213 (330)
Q Consensus 134 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~ 213 (330)
..-..-...|..++..... .+.-. +|.|+.|-....++.-.. ......|..++...+...+ -. ||.+..|-.
T Consensus 95 g~P~~~~~~v~~ia~G~~h---s~al~-~G~v~~wG~n~~gqlg~~-~~~~~~i~~i~~G~~~~~~--l~-~G~v~~wG~ 166 (282)
T 3qhy_B 95 TVPAEARSGVDAIAAGAWA---SYALK-DGKVIAWGDDSDGQTTVP-AEAQSGVTALDGGVYTALA--VK-NGGVIAWGD 166 (282)
T ss_dssp CCCGGGSSSEEEEEEETTE---EEEEE-TTEEEEEECCTTSTTSCC-GGGGSSEEEEEECSSEEEE--EE-TTEEEEEEC
T ss_pred CCCcccCCCeEEEECcCCE---EEEEe-CCeEEEecCCCCCcCCCC-ccCCCCeEEEEcccCEEEE--EE-CCEEEEecC
Confidence 2111123467777765543 33334 899999987654432211 1123457777665433222 33 799999987
Q ss_pred CCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEEEEEecCCCEEEEeecC
Q psy6213 214 SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRV 293 (330)
Q Consensus 214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d 293 (330)
....++.........+..++...... ++. . +|.++.|=.....+ +-........|..++...+. .++ -. |
T Consensus 167 n~~gqlg~p~~~~~~v~~i~~G~~hs--~al-~---~G~v~~wG~n~~gq-lg~p~~~~~~v~~i~~G~~h-~~a-l~-~ 236 (282)
T 3qhy_B 167 NYFGQTTVPAEAQSGVDDVAGGIFHS--LAL-K---DGKVIAWGDNRYKQ-TTVPTEALSGVSAIASGEWY-SLA-LK-N 236 (282)
T ss_dssp CTTSTTSCCGGGGSSEEEEEECSSEE--EEE-E---TTEEEEEECCTTST-TCCCGGGGSSCCEEEECSSC-EEE-EE-T
T ss_pred CCCCCCCCceecCCCeEEEEecCCEE--EEE-E---CCeEEEEECCCCCC-CCCCcccCCCceEEEcCCCE-EEE-EE-C
Confidence 65433332222345677777655433 444 5 99999997654433 21111222457777765433 333 33 9
Q ss_pred CeEeeeecc
Q psy6213 294 SIIPRAKNI 302 (330)
Q Consensus 294 g~i~iw~~~ 302 (330)
|.|+.|-..
T Consensus 237 g~v~~wG~n 245 (282)
T 3qhy_B 237 GKVIAWGSS 245 (282)
T ss_dssp TEEEEESTT
T ss_pred CEEEEecCC
Confidence 999999644
No 336
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.08 E-value=0.081 Score=42.51 Aligned_cols=184 Identities=5% Similarity=0.033 Sum_probs=86.7
Q ss_pred eeecCCCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcC----CC-------cEEEEECCCCCC
Q psy6213 18 LAQPSRNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGAT----NG-------AVVVWNLGQISR 86 (330)
Q Consensus 18 ~~~~gd~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----dg-------~i~iw~~~~~~~ 86 (330)
+++.|...+..||..+++... ......... .-.+++ .. ++.+++.|+. ++ .+..||..+. .
T Consensus 18 i~~~GG~~~~~yd~~~~~W~~-~~~~~~~~r----~~~~~~-~~-~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~-~ 89 (318)
T 2woz_A 18 ILLVNDTAAVAYDPMENECYL-TALAEQIPR----NHSSIV-TQ-QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSS-E 89 (318)
T ss_dssp EEEECSSEEEEEETTTTEEEE-EEECTTSCS----SEEEEE-CS-SSCEEEEESSCC-------CCCBEEEEEETTTT-E
T ss_pred hhhccccceEEECCCCCceec-ccCCccCCc----cceEEE-EE-CCEEEEECCcccCccccCCCccccEEEEeCCCC-c
Confidence 344443348899998877544 221110000 012222 22 6778888873 12 1677887651 1
Q ss_pred CceeEEecccccceeEEEEEecCCCEEEEEecC-------CcEEEEEeecCceeeeeecCCCCe-EEEEEcCCCCcEEEE
Q psy6213 87 SKQERVFNDHKRTVNKVSFHYVESNWLISGSQD-------GTMRLFDIRCQESTKIFHSNTESV-RDVEFNPHSPYAFAS 158 (330)
Q Consensus 87 ~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d-------~~i~i~d~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~~~~ 158 (330)
......+..... -.+++.. ++.+++.|+.+ ..+.+||..+.+-...-....... .+++. .++. +++.
T Consensus 90 W~~~~~~p~~r~-~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~-iyv~ 164 (318)
T 2woz_A 90 WVGLPPLPSARC-LFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGM-IYCL 164 (318)
T ss_dssp EEECSCBSSCBC-SCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTE-EEEE
T ss_pred EEECCCCCcccc-ccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCE-EEEE
Confidence 222111111111 1222222 67777888764 247788877654332211111111 11222 3444 6777
Q ss_pred Eec------CCcEEEEecCCCcc-ceeeeccCCCCeEEEEEcCCCCEEEEEecC-----CcEEEEeCCCC
Q psy6213 159 VSE------NGTIQQWDVRRPEK-CFYQFTAHSGPIFACDWHPEHAWLATASRD-----KTIKVWDLSIK 216 (330)
Q Consensus 159 ~~~------dg~i~i~d~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~ 216 (330)
|+. ...+.+||+.+..= .+..+...... .+++.. ++++++.|+.+ ..+.+||+.+.
T Consensus 165 GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 165 GGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSM-FGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp CCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred cCCCCCCCccceEEEEcCCCCEEEECCCCCCCccc-ceEEEE-CCEEEEEcCcCCCCccceEEEEECCCC
Confidence 764 23588999886321 11111111111 122222 56777777754 34778898765
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=97.05 E-value=0.11 Score=47.01 Aligned_cols=199 Identities=10% Similarity=0.046 Sum_probs=99.3
Q ss_pred eCCCe-eecC-C----CeEEEEEcCCcceeeee-ceeeccccccccceeeeeecccCCcEEEEEcCCC------cEEEEE
Q psy6213 14 ADNGL-AQPS-R----NVFKIFLIKDTEFVETH-NLRVGKNINLNFSCNDVAWSCIEENHIATGATNG------AVVVWN 80 (330)
Q Consensus 14 ~~~~~-~~~g-d----~~i~iw~~~~~~~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg------~i~iw~ 80 (330)
-++.+ +.+| + ..+.+||..+++..... ....+........-..+.+.. ++.+++.|+.++ .+.+||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~-~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISR-NNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETT-TTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEcc-CCEEEEEcCCCCCCCccccEEEEe
Confidence 34555 5555 3 46788888887655433 211000000001113333332 566777776543 477888
Q ss_pred CCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCC--cEEEEEeecCceeeee-----ecCCCCeEEEEEcCCCC
Q psy6213 81 LGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDG--TMRLFDIRCQESTKIF-----HSNTESVRDVEFNPHSP 153 (330)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~-----~~~~~~v~~~~~~~~~~ 153 (330)
..+. .......+..... -.+.+... ++.+++.|+.++ .+.+||..+.+-...- ........++.+..+..
T Consensus 475 ~~t~-~W~~~~~~p~~R~-~h~~~~~~-~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~ 551 (695)
T 2zwa_A 475 MKTR-EWSMIKSLSHTRF-RHSACSLP-DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSK 551 (695)
T ss_dssp TTTT-EEEECCCCSBCCB-SCEEEECT-TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTT
T ss_pred CCCC-cEEECCCCCCCcc-cceEEEEc-CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCC
Confidence 8761 1222211111111 11222222 678888887654 6899998766432221 11112223355565534
Q ss_pred cEEEEEec--C-----CcEEEEecCCCcc--c--eeeecc---CCCCeEEEEEcCCCCEEEEEecC--------CcEEEE
Q psy6213 154 YAFASVSE--N-----GTIQQWDVRRPEK--C--FYQFTA---HSGPIFACDWHPEHAWLATASRD--------KTIKVW 211 (330)
Q Consensus 154 ~~~~~~~~--d-----g~i~i~d~~~~~~--~--~~~~~~---~~~~i~~~~~~~~~~~l~~~~~d--------g~i~i~ 211 (330)
.+++.|+. + ..+.+||+.+..- . ...+.. ....-.++....++++++.|+.+ ..+.+|
T Consensus 552 ~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~y 631 (695)
T 2zwa_A 552 QGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISL 631 (695)
T ss_dssp EEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEE
T ss_pred EEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEE
Confidence 47777765 2 3588999887431 0 111111 11111223333347778888743 458999
Q ss_pred eCCCC
Q psy6213 212 DLSIK 216 (330)
Q Consensus 212 d~~~~ 216 (330)
|+.+.
T Consensus 632 d~~t~ 636 (695)
T 2zwa_A 632 DPLSE 636 (695)
T ss_dssp ETTTT
T ss_pred ECCCC
Confidence 98876
No 338
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.02 E-value=0.092 Score=42.11 Aligned_cols=213 Identities=9% Similarity=-0.022 Sum_probs=96.7
Q ss_pred cEEEEEcCCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEec----C-------CcEEEEEeecCcee
Q psy6213 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQ----D-------GTMRLFDIRCQEST 133 (330)
Q Consensus 65 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~----d-------~~i~i~d~~~~~~~ 133 (330)
.+++.|+ ..+..||..+.. ... ..+............. .++.+++.|+. + ..+..||..+.+-.
T Consensus 6 ~l~~~GG--~~~~~yd~~~~~-W~~-~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~ 80 (315)
T 4asc_A 6 LIFMISE--EGAVAYDPAANE-CYC-ASLSSQVPKNHVSLVT-KENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL 80 (315)
T ss_dssp EEEEEET--TEEEEEETTTTE-EEE-EECCCCSCSSEEEEEC-TTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE
T ss_pred EEEEEcC--CceEEECCCCCe-Eec-CCCCCCCCccceEEEE-ECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE
Confidence 3455565 568999988721 221 2222111112222222 26788888874 1 12777887765432
Q ss_pred eeeecCCCCe--EEEEEcCCCCcEEEEEecC--------CcEEEEecCCCc-cceeeeccCCCCeEEEEEcCCCCEEEEE
Q psy6213 134 KIFHSNTESV--RDVEFNPHSPYAFASVSEN--------GTIQQWDVRRPE-KCFYQFTAHSGPIFACDWHPEHAWLATA 202 (330)
Q Consensus 134 ~~~~~~~~~v--~~~~~~~~~~~~~~~~~~d--------g~i~i~d~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 202 (330)
.. .....+- .+++.. ++ .+++.|+.+ ..+.+||..+.. ..+..+......- +++. -++++++.|
T Consensus 81 ~~-~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~G 155 (315)
T 4asc_A 81 GM-PPLPSPRCLFGLGEA-LN-SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGH-TVLS-HMDLVYVIG 155 (315)
T ss_dssp EC-CCBSSCEESCEEEEE-TT-EEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSC-EEEE-ETTEEEEEC
T ss_pred EC-CCCCcchhceeEEEE-CC-EEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccce-eEEE-ECCEEEEEe
Confidence 21 1111111 112222 33 367777642 358889987632 1111111111111 2222 356777777
Q ss_pred ec-C-----CcEEEEeCCCCccccc-eec-cccceEEEEEcCCCCeEEEEeecccC---CeEEEEEccCCCccceEeecC
Q psy6213 203 SR-D-----KTIKVWDLSIKPSLEY-SIN-TIASVSRIKWRPQRKFHLASCSLVVD---SSVNVWDIRRPYIPLASFTEH 271 (330)
Q Consensus 203 ~~-d-----g~i~i~d~~~~~~~~~-~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~---~~i~i~d~~~~~~~~~~~~~~ 271 (330)
+. + ..+.+||..+.+-... ..+ .......+.+ +++.+++++. ..+ ..+.+||+.+..- ..+...
T Consensus 156 G~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~-~~~~~~~~~~~yd~~~~~W--~~~~~~ 230 (315)
T 4asc_A 156 GKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGV-TDTGLTSSAEVYSITDNKW--APFEAF 230 (315)
T ss_dssp CBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEE-CSSSEEEEEEEEETTTTEE--EEECCC
T ss_pred CCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEecc-CCCCccceEEEEECCCCeE--EECCCC
Confidence 76 2 4589999876521111 111 1111222222 4554444443 111 2688899877642 222111
Q ss_pred C--CCeEEEEEecCCCEEEEeecC
Q psy6213 272 K--DVVSGLAWRGDPQLFIASSRV 293 (330)
Q Consensus 272 ~--~~v~~~~~~~~~~~l~s~~~d 293 (330)
. ..-.+++. -++++++.|+.+
T Consensus 231 p~~r~~~~~~~-~~~~l~v~GG~~ 253 (315)
T 4asc_A 231 PQERSSLSLVS-LVGTLYAIGGFA 253 (315)
T ss_dssp SSCCBSCEEEE-ETTEEEEEEEEE
T ss_pred CCcccceeEEE-ECCEEEEECCcc
Confidence 1 11112222 266777777764
No 339
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.89 E-value=0.031 Score=45.28 Aligned_cols=193 Identities=10% Similarity=0.050 Sum_probs=98.7
Q ss_pred eCCCeeecC-CCeEEEEEcCCcceeeeeceee-ccccccccceeeeeecccCCcEEEEE-cCCCcEEEEECCCCCCCcee
Q psy6213 14 ADNGLAQPS-RNVFKIFLIKDTEFVETHNLRV-GKNINLNFSCNDVAWSCIEENHIATG-ATNGAVVVWNLGQISRSKQE 90 (330)
Q Consensus 14 ~~~~~~~~g-d~~i~iw~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~-~~dg~i~iw~~~~~~~~~~~ 90 (330)
.++..+++. ||.|.-+|.++|+..-.++... ....... .-.. +.++..++.. ..||.|..++..+ +...
T Consensus 9 ~~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~----~~~~-~~~~~~~vv~p~~dG~l~a~~~~~---G~~~ 80 (339)
T 2be1_A 9 LSDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQ----EPSR-LETYETLIIEPFGDGNIYYFNAHQ---GLQK 80 (339)
T ss_dssp EEEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECC----CSCT-TTSSEEEEECCSTTTEEEEEETTT---EEEE
T ss_pred eCCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEec----CCcc-ccCCcEEEEEECCCCEEEEEECCC---CcEE
Confidence 344445555 9999999999988766554431 0111000 0000 1133444443 5899999999876 3222
Q ss_pred EEecc----cccceeE---EEE-Ee---cCCCEEEEEecCCcEEEEEeecCceeeeeecCCC--C-----eEEEEEc---
Q psy6213 91 RVFND----HKRTVNK---VSF-HY---VESNWLISGSQDGTMRLFDIRCQESTKIFHSNTE--S-----VRDVEFN--- 149 (330)
Q Consensus 91 ~~~~~----~~~~i~~---i~~-~~---~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--~-----v~~~~~~--- 149 (330)
..+.. ...++.. ... .+ ..+..+++|+.+|.+...|+++|+.+..+..... . ..|....
T Consensus 81 ~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~ 160 (339)
T 2be1_A 81 LPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIK 160 (339)
T ss_dssp EEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC----------------
T ss_pred eeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccc
Confidence 22211 1111211 000 00 0467789999999999999999999988864321 0 1111111
Q ss_pred --CCCCcEEEEEecCCcEEEEecCCCccceeee-----ccCCCC--e-EEEEEcCCCCEEEEEecCCcEEEEeCCCCccc
Q psy6213 150 --PHSPYAFASVSENGTIQQWDVRRPEKCFYQF-----TAHSGP--I-FACDWHPEHAWLATASRDKTIKVWDLSIKPSL 219 (330)
Q Consensus 150 --~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~-----~~~~~~--i-~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 219 (330)
..+. .++.+..+..+.+.+ ++ ++ .-.+ ...... + .+-..+.++.+ +.++.||.|.-+|..++...
T Consensus 161 ~d~~~~-~v~ig~~~y~v~~~~-~s-G~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~ 235 (339)
T 2be1_A 161 LQECEN-MIVIGKTIFELGIHS-YD-GA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIAR 235 (339)
T ss_dssp ----CC-EEEEEEEEEECEECC-TT-SC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEE
T ss_pred cccCCC-eEEEecceEEEEEEC-CC-CC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEE
Confidence 1123 466677677777766 33 22 1111 000000 0 00001124555 45788899999998877543
No 340
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.88 E-value=0.078 Score=43.40 Aligned_cols=97 Identities=11% Similarity=0.115 Sum_probs=47.2
Q ss_pred CCcEEEEEcCC-CcEEEEECCC-CCCCceeEEecccccceeEEEEEecCCCEEEEEec-C---------CcEEEEEeecC
Q psy6213 63 EENHIATGATN-GAVVVWNLGQ-ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQ-D---------GTMRLFDIRCQ 130 (330)
Q Consensus 63 ~~~~l~~~~~d-g~i~iw~~~~-~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~-d---------~~i~i~d~~~~ 130 (330)
++.+++.|+.+ ..+.+||... ......+..+......-.+++.. ++.+++.|+. + ..+.+||..+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~ 96 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTN 96 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCCC
Confidence 56666777643 4688888863 12233332222111111223333 5677777776 2 46888998766
Q ss_pred ceeeeeecC-CCCeEEEEEcCCCCcEEEEEecC
Q psy6213 131 ESTKIFHSN-TESVRDVEFNPHSPYAFASVSEN 162 (330)
Q Consensus 131 ~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~~d 162 (330)
+-...-... .......+...++. +++.|+.+
T Consensus 97 ~W~~~~~~~p~~r~~~~~~~~~~~-iyv~GG~~ 128 (357)
T 2uvk_A 97 SWVKLMSHAPMGMAGHVTFVHNGK-AYVTGGVN 128 (357)
T ss_dssp EEEECSCCCSSCCSSEEEEEETTE-EEEEECCC
T ss_pred cEEECCCCCCcccccceEEEECCE-EEEEeCcC
Confidence 433221111 11111111223444 77888754
No 341
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.78 E-value=0.14 Score=40.79 Aligned_cols=202 Identities=7% Similarity=0.023 Sum_probs=106.9
Q ss_pred eecccCCcEEEEEcCC--------------CcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEe----cC
Q psy6213 58 AWSCIEENHIATGATN--------------GAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGS----QD 119 (330)
Q Consensus 58 ~~~~~~~~~l~~~~~d--------------g~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~----~d 119 (330)
-+++ +++.|+-.... ..|+..+++. ... ..+.. .. +..|++ +++.|+-.. ..
T Consensus 59 ~i~~-~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg---~~~-~~l~~--~~--~~~~s~-~g~~Iy~~~~~~~~~ 128 (302)
T 3s25_A 59 YINA-DKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG---HGS-TVLDP--DP--CIYASL-IGNYIYYLHYDTQTA 128 (302)
T ss_dssp EEEE-CSSEEEEEEECC------CCSSCCSEEEEEEETTS---CCC-EEEEC--SC--EEEEEE-ETTEEEEEEESSSSC
T ss_pred eEEE-cCCEEEEEECCCCcccccceeccCCCeEEEEeCCC---Ccc-eEeec--CC--ccEEEE-eCCEEEEEeecCCCC
Confidence 3466 67777665442 3566666665 222 22221 11 225676 566666554 23
Q ss_pred CcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeeccCCCCeEEEEEcCCCCEE
Q psy6213 120 GTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWL 199 (330)
Q Consensus 120 ~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l 199 (330)
..|+..++... ....+..+.. .+++++++.++.+......|+..++.... ....+. +... ..+.|++.+|
T Consensus 129 ~~Iy~~~~dGs-~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~-~~~l~~---~~~~-~~~~P~g~~i 198 (302)
T 3s25_A 129 TSLYRIRIDGE-EKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQS-EALFYD---CNCY-KPVVLDDTNV 198 (302)
T ss_dssp EEEEEEETTSC-CCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTE-EEEEEC---SCEE-EEEEEETTEE
T ss_pred ceEEEEECCCC-CeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCC-EEEEeC---CCcc-ceeeecCCEE
Confidence 45555565533 3344443322 45678888766565446778888877532 222222 2222 3456888888
Q ss_pred EEEecC--CcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeecCCCCeEE
Q psy6213 200 ATASRD--KTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSG 277 (330)
Q Consensus 200 ~~~~~d--g~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~v~~ 277 (330)
+-...+ ..|..-++........ . ...+ ..|+|++..|+.+... ..+.|..-++..... +.+... .+..
T Consensus 199 y~t~~~~~~~I~~~~ldG~~~~~L-t--~~~~--~~~~~~g~~Iy~~~~~-~~~~i~~~~~DG~~r--~~l~~~--~~~~ 268 (302)
T 3s25_A 199 YYMDVNRDNAIVHVNINNPNPVVL-T--EANI--EHYNVYGSLIFYQRGG-DNPALCVVKNDGTGF--KELAKG--EFCN 268 (302)
T ss_dssp EEEEGGGTTEEEEECSSSCCCEEC-S--CSCE--EEEEEETTEEEEEECS-SSCEEEEEETTSCCC--EEEEES--CEEE
T ss_pred EEEEcCCCcEEEEEECCCCCeEEE-e--CCCc--ceEEECCCEEEEEECC-CCcEEEEEECCCCcc--EEeeCC--ccce
Confidence 776644 3566666665533222 1 1223 3488889987665321 356777777765442 222221 2333
Q ss_pred EEEecCCCEEEEee
Q psy6213 278 LAWRGDPQLFIASS 291 (330)
Q Consensus 278 ~~~~~~~~~l~s~~ 291 (330)
+++.+.+|+-..
T Consensus 269 --i~i~~d~Iy~td 280 (302)
T 3s25_A 269 --INVTSQYVYFTD 280 (302)
T ss_dssp --EEECSSEEEEEE
T ss_pred --EEEeCCEEEEEE
Confidence 445566666554
No 342
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.71 E-value=0.23 Score=42.20 Aligned_cols=103 Identities=13% Similarity=0.163 Sum_probs=58.4
Q ss_pred eeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecc------cccceeEEEEEec---CCCEEEEEec-------
Q psy6213 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFND------HKRTVNKVSFHYV---ESNWLISGSQ------- 118 (330)
Q Consensus 55 ~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~------~~~~i~~i~~~~~---~~~~l~~~~~------- 118 (330)
..++|.| +++++++-...+.|.+++... .....+..+.. .......|+|+|+ ++.+.++-+.
T Consensus 30 ~~~a~~p-dG~l~V~e~~gg~I~~~~~~~-g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 30 HALLWGP-DNQIWLTERATGKILRVNPES-GSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp EEEEECT-TSCEEEEETTTCEEEEECTTT-CCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred eEEEEcC-CCcEEEEEcCCCEEEEEECCC-CcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 7899999 888777655445788887543 11222222221 2456779999983 3444444332
Q ss_pred -----CCcEEEEEeecC-------ceee-eeec-CCCCeEEEEEcCCCCcEEEEEe
Q psy6213 119 -----DGTMRLFDIRCQ-------ESTK-IFHS-NTESVRDVEFNPHSPYAFASVS 160 (330)
Q Consensus 119 -----d~~i~i~d~~~~-------~~~~-~~~~-~~~~v~~~~~~~~~~~~~~~~~ 160 (330)
...|.-++.... +.+. .+.. .......++|.|+|. ++++.+
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIG 162 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEEC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEEC
Confidence 235666665432 1111 1211 123478899999997 566544
No 343
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.70 E-value=0.24 Score=42.12 Aligned_cols=106 Identities=8% Similarity=0.136 Sum_probs=61.7
Q ss_pred cceeEEEEEecCCCEEEEEecCCcEEEEEeecCceee--eeec------CCCCeEEEEEcCC---CCcEEEEEec-----
Q psy6213 98 RTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTK--IFHS------NTESVRDVEFNPH---SPYAFASVSE----- 161 (330)
Q Consensus 98 ~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~--~~~~------~~~~v~~~~~~~~---~~~~~~~~~~----- 161 (330)
.....++|.| +++++++-...+.|++++..+++... .+.. .......++|+|+ +..++++-+.
T Consensus 27 ~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 27 NKPHALLWGP-DNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 4567899998 78866665433478888765444322 2211 2356779999996 5545555432
Q ss_pred -------CCcEEEEecCCCc------ccee-eecc-CCCCeEEEEEcCCCCEEEEEec
Q psy6213 162 -------NGTIQQWDVRRPE------KCFY-QFTA-HSGPIFACDWHPEHAWLATASR 204 (330)
Q Consensus 162 -------dg~i~i~d~~~~~------~~~~-~~~~-~~~~i~~~~~~~~~~~l~~~~~ 204 (330)
...|..++..... +.+. .+.. .......|+|.|+|.+.++.+.
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 2356666654311 1111 1221 1234689999999987777553
No 344
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.66 E-value=0.37 Score=43.96 Aligned_cols=275 Identities=9% Similarity=0.093 Sum_probs=147.7
Q ss_pred ccceEEEEeeCCCeeecCCCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCcEEEEECCCC
Q psy6213 5 SPVHKHGLKADNGLAQPSRNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQI 84 (330)
Q Consensus 5 ~~v~~~~~s~~~~~~~~gd~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~ 84 (330)
..|.++...++|.+.++..+-+..++..+++.... ....... .....|.++...+ ++..|..|+. +-+..++..+
T Consensus 146 ~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~-~~~~~~~-~~~~~i~~i~~d~-~~~~lWigt~-~Gl~~~~~~~- 220 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYVGTYNGLCRYIPSNGKFEGI-PLPVHSS-QSNLFVNSLLEDT-TRQCVWIGTE-GYLFQYFPST- 220 (758)
T ss_dssp SCEEEEEECTTCCEEEEETTEEEEEETTTTEEEEE-CCCCCTT-CSSCCEEEEEEET-TTTEEEEEEE-EEEEEEETTT-
T ss_pred CeEEEEEEcCCCCEEEEeCCCHhhCccCCCceEEe-cCCCccc-cccceeEEEEEEC-CCCEEEEEEC-CCCeEEcCCC-
Confidence 35777777777887333344577788776654321 1111100 0112256777665 5665555664 4588888765
Q ss_pred CCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeee-------cCCCCeEEEEEcCCCCcEEE
Q psy6213 85 SRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFH-------SNTESVRDVEFNPHSPYAFA 157 (330)
Q Consensus 85 ~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~ 157 (330)
.+...........|.++...+ ++. |..|+.+ -+.+++..+++...... .....|.++....++. +-
T Consensus 221 --~~~~~~~~l~~~~i~~i~~d~-~g~-lWigT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~--lW 293 (758)
T 3ott_A 221 --GQIKQTEAFHNNSIKSLALDG-NGD-LLAGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN--IW 293 (758)
T ss_dssp --TEEEEEEEEEEEEEEEEEECT-TCC-EEEEETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC--EE
T ss_pred --CeEEeccCCCCCeEEEEEEcC-CCC-EEEEeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC--EE
Confidence 222111111234577777653 444 5555544 58888876554322111 1234588888888776 55
Q ss_pred EEecCCcEEEEecCCCccceeeec-----cCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcc--cccee-------
Q psy6213 158 SVSENGTIQQWDVRRPEKCFYQFT-----AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPS--LEYSI------- 223 (330)
Q Consensus 158 ~~~~dg~i~i~d~~~~~~~~~~~~-----~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~--~~~~~------- 223 (330)
.|+..| +.++........ .... .....|.++.-.++|.+. .|+.+| +..++..++.. .....
T Consensus 294 iGT~~G-l~~~~~~~~~~~-~~~~~~~~~~~~~~v~~i~~D~~g~lW-iGt~~G-l~~~~~~~~~~~~~~~~~~~~~~~~ 369 (758)
T 3ott_A 294 LGTDYG-ISLSRYNSALQF-IPISQITGTGDGNQFYSLFRDSKGFYW-FGGANG-LIRFTDPAGERHDAIWYRMGDKTYP 369 (758)
T ss_dssp EEESSS-EEEECCCC-CEE-EEHHHHSCSCCCCBEEEEEECTTCCEE-EEETTE-EEEESCTTSSCCCCEEECTTCSSSC
T ss_pred EEeCCc-ccccccCCceeE-EecccCCCCCCCceEEEEEEcCCCCEE-EeeCCc-ceeecccccccceeEEeccCCcCCC
Confidence 666666 555443221111 1110 123468888888777744 455555 66676554311 10110
Q ss_pred ccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCccceEeec-----CCCCeEEEEEecCCCEEEEeecCCeEee
Q psy6213 224 NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTE-----HKDVVSGLAWRGDPQLFIASSRVSIIPR 298 (330)
Q Consensus 224 ~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~s~~~dg~i~i 298 (330)
-....|.++.-.++|.. .++ + ++-|..||..+++........ ....|.++.-.+++.+. .|+..+-|.+
T Consensus 370 l~~~~v~~i~~d~~g~l-Wig-t---~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lW-igT~~~Gl~~ 443 (758)
T 3ott_A 370 LSHNRIRHIYEDKEQQL-WIA-T---DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQLW-ISTCLGGIFV 443 (758)
T ss_dssp CSCSCEEEEEECTTSCE-EEE-E---TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEEE-EEESSSCEEE
T ss_pred CCCCceEEEEECCCCCE-EEE-e---CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCEE-EEECCCceEE
Confidence 11245888888888874 333 3 457999998776431111111 12458888877777644 4665555666
Q ss_pred eec
Q psy6213 299 AKN 301 (330)
Q Consensus 299 w~~ 301 (330)
++.
T Consensus 444 ~~~ 446 (758)
T 3ott_A 444 VDK 446 (758)
T ss_dssp EEH
T ss_pred Ecc
Confidence 653
No 345
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.59 E-value=0.21 Score=40.07 Aligned_cols=212 Identities=9% Similarity=0.089 Sum_probs=94.4
Q ss_pred cEEEEEcCCCcEEEEECCCCCCCceeEEecc-cccceeEEEEEecCCCEEEEEec----CC-------cEEEEEeecCce
Q psy6213 65 NHIATGATNGAVVVWNLGQISRSKQERVFND-HKRTVNKVSFHYVESNWLISGSQ----DG-------TMRLFDIRCQES 132 (330)
Q Consensus 65 ~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~~~~l~~~~~----d~-------~i~i~d~~~~~~ 132 (330)
.+++.|+. .+..||..+.. ... ..... ....-.+++. .++.+++.|+. ++ .+..||..+.+-
T Consensus 17 ~i~~~GG~--~~~~yd~~~~~-W~~-~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 90 (318)
T 2woz_A 17 LILLVNDT--AAVAYDPMENE-CYL-TALAEQIPRNHSSIVT--QQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEW 90 (318)
T ss_dssp EEEEECSS--EEEEEETTTTE-EEE-EEECTTSCSSEEEEEC--SSSCEEEEESSCC-------CCCBEEEEEETTTTEE
T ss_pred hhhhcccc--ceEEECCCCCc-eec-ccCCccCCccceEEEE--ECCEEEEECCcccCccccCCCccccEEEEeCCCCcE
Confidence 44555553 48889987621 211 11111 1111222322 26778888873 12 167778766543
Q ss_pred eee--eecCCCCeEEEEEcCCCCcEEEEEecC-------CcEEEEecCCCccceeeeccCCCCe--EEEEEcCCCCEEEE
Q psy6213 133 TKI--FHSNTESVRDVEFNPHSPYAFASVSEN-------GTIQQWDVRRPEKCFYQFTAHSGPI--FACDWHPEHAWLAT 201 (330)
Q Consensus 133 ~~~--~~~~~~~v~~~~~~~~~~~~~~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~i--~~~~~~~~~~~l~~ 201 (330)
... +....... +++.. ++. +++.|+.+ ..+.+||+.+.. -..+.....+. .+++. .++++++.
T Consensus 91 ~~~~~~p~~r~~~-~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~yd~~~~~--W~~~~~~p~~r~~~~~~~-~~~~iyv~ 164 (318)
T 2woz_A 91 VGLPPLPSARCLF-GLGEV-DDK-IYVVAGKDLQTEASLDSVLCYDPVAAK--WSEVKNLPIKVYGHNVIS-HNGMIYCL 164 (318)
T ss_dssp EECSCBSSCBCSC-EEEEE-TTE-EEEEEEEBTTTCCEEEEEEEEETTTTE--EEEECCCSSCEESCEEEE-ETTEEEEE
T ss_pred EECCCCCcccccc-ceEEE-CCE-EEEEcCccCCCCcccceEEEEeCCCCC--EeECCCCCCcccccEEEE-ECCEEEEE
Confidence 221 11111111 22222 343 77777754 247788887632 11111111111 11222 36677777
Q ss_pred Eec------CCcEEEEeCCCCccccc-eecc-ccceEEEEEcCCCCeEEEEeecccC---CeEEEEEccCCCcc-ceEee
Q psy6213 202 ASR------DKTIKVWDLSIKPSLEY-SINT-IASVSRIKWRPQRKFHLASCSLVVD---SSVNVWDIRRPYIP-LASFT 269 (330)
Q Consensus 202 ~~~------dg~i~i~d~~~~~~~~~-~~~~-~~~v~~~~~~~~~~~l~~~~~~~~~---~~i~i~d~~~~~~~-~~~~~ 269 (330)
|+. -..+.+||+.+.+-... ..+. ......+.+ +++.+++++. ..+ ..+.+||+.+..-. +..+.
T Consensus 165 GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~-~~~~~~~~~~~yd~~~~~W~~~~~~p 241 (318)
T 2woz_A 165 GGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGV-TEDGLSASVEAFDLKTNKWEVMTEFP 241 (318)
T ss_dssp CCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEE-ETTEEEEEEEEEETTTCCEEECCCCS
T ss_pred cCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCc-CCCCccceEEEEECCCCeEEECCCCC
Confidence 764 23589999877621111 1111 111222222 4454444443 111 45778998776421 11111
Q ss_pred cCCCCeEEEEEecCCCEEEEeecC
Q psy6213 270 EHKDVVSGLAWRGDPQLFIASSRV 293 (330)
Q Consensus 270 ~~~~~v~~~~~~~~~~~l~s~~~d 293 (330)
.....- +++. -++++++.|+.+
T Consensus 242 ~~r~~~-~~~~-~~~~i~v~GG~~ 263 (318)
T 2woz_A 242 QERSSI-SLVS-LAGSLYAIGGFA 263 (318)
T ss_dssp SCCBSC-EEEE-ETTEEEEECCBC
T ss_pred Ccccce-EEEE-ECCEEEEECCee
Confidence 111111 2222 266777777764
No 346
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.33 E-value=0.33 Score=39.50 Aligned_cols=229 Identities=10% Similarity=0.049 Sum_probs=120.8
Q ss_pred eeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEe----cccccceeEEEEEec---CCCEEEEEe--cCCcEEEE
Q psy6213 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVF----NDHKRTVNKVSFHYV---ESNWLISGS--QDGTMRLF 125 (330)
Q Consensus 55 ~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----~~~~~~i~~i~~~~~---~~~~l~~~~--~d~~i~i~ 125 (330)
..++|.| ++.++++-...|.|++++.... ....+..+ .........|+++|+ ++.+.++-+ .++.|.-|
T Consensus 35 ~~ia~~p-dG~llVter~~G~I~~v~~~~g-~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~ 112 (347)
T 3das_A 35 WGLAPLP-GGDLLVSSRDEATITRVDAKTG-RKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM 112 (347)
T ss_dssp EEEEECT-TSCEEEEETTTCEEEEECTTTC-CEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred eEEEEcC-CCcEEEEEecCCEEEEEECCCC-cEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence 7899999 8887777665899999876541 11222222 123456789999983 344434322 34556666
Q ss_pred EeecCc--------eeee---eec-CCCCeEEEEEcCCCCcEEEEEec-------------CCcEEEEecCCCc---c--
Q psy6213 126 DIRCQE--------STKI---FHS-NTESVRDVEFNPHSPYAFASVSE-------------NGTIQQWDVRRPE---K-- 175 (330)
Q Consensus 126 d~~~~~--------~~~~---~~~-~~~~v~~~~~~~~~~~~~~~~~~-------------dg~i~i~d~~~~~---~-- 175 (330)
.+..+. .... +.. ....-..++|.|++. ++++.+. .|.|.-.+....- .
T Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf 191 (347)
T 3das_A 113 LYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPF 191 (347)
T ss_dssp EBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSS
T ss_pred EeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCC
Confidence 655421 1111 211 112345699999997 5666432 3555555554210 0
Q ss_pred -ceeee-ccCCCCeEEEEEcCCCCEEEEEe-cCCcEEEEeCCCCcc-----------------ccceec-cccceEEEEE
Q psy6213 176 -CFYQF-TAHSGPIFACDWHPEHAWLATAS-RDKTIKVWDLSIKPS-----------------LEYSIN-TIASVSRIKW 234 (330)
Q Consensus 176 -~~~~~-~~~~~~i~~~~~~~~~~~l~~~~-~dg~i~i~d~~~~~~-----------------~~~~~~-~~~~v~~~~~ 234 (330)
....+ .+|. ....++|+|+|.+.++-. .|+.=.|--+..+.. ...... +......++|
T Consensus 192 ~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~ 270 (347)
T 3das_A 192 PGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAY 270 (347)
T ss_dssp TTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEE
T ss_pred CCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEE
Confidence 01111 2343 356899999887655442 232222222222211 011111 1135567777
Q ss_pred cCCCCeEEEEeecccCCeEEEEEccCCCc---cceEeecCCCCeEEEEEecCCCEEEEee
Q psy6213 235 RPQRKFHLASCSLVVDSSVNVWDIRRPYI---PLASFTEHKDVVSGLAWRGDPQLFIASS 291 (330)
Q Consensus 235 ~~~~~~l~~~~~~~~~~~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~s~~ 291 (330)
.. +. ++.+.- ..+.|....+..... +...+.+....+.+++..|||.+.++..
T Consensus 271 ~~-g~-~~~~~l--~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td 326 (347)
T 3das_A 271 AE-GS-VWMAGL--RGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTS 326 (347)
T ss_dssp ET-TE-EEEEES--TTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEEC
T ss_pred Ec-Cc-eeeccc--cCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEc
Confidence 64 44 344443 366676667765421 1222334446899999999998766644
No 347
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=96.16 E-value=0.56 Score=40.52 Aligned_cols=229 Identities=11% Similarity=0.141 Sum_probs=129.7
Q ss_pred EEEEEcCCCcEEEEECCCCCCCceeEEecccc-------------------------cceeEEEEEec----CCCEEEEE
Q psy6213 66 HIATGATNGAVVVWNLGQISRSKQERVFNDHK-------------------------RTVNKVSFHYV----ESNWLISG 116 (330)
Q Consensus 66 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~-------------------------~~i~~i~~~~~----~~~~l~~~ 116 (330)
.+.+|+..|.++++-+.+ ++.+..+.... +......+|.. ++++|+.-
T Consensus 72 ~f~SgG~sG~v~v~G~PS---mR~l~~IpVF~~~~~~G~G~t~esk~il~~~~~~~~gD~HHp~~S~tdg~yDGrylfiN 148 (638)
T 3sbq_A 72 GFWSGGHQGEVRVLGVPS---MRELMRIPVFNVDSATGWGLTNESRHIMGDSAKFLNGDCHHPHISMTDGKYDGKYLFIN 148 (638)
T ss_dssp EEEECGGGCCEEEEEETT---TEEEEEECSSSCCTTTCTTTBHHHHHHHGGGGGCCCCCCCCCEEEEETTEEEEEEEEEE
T ss_pred EEeecCcCceEEEEecCC---cceEEEeecccCCCCcccCCchhHHHHHhcCCCccCCCcCCCcccccCCeeeeEEEEEe
Confidence 477889999999999877 55554432110 11111122221 34566665
Q ss_pred e-cCCcEEEEEeecCceeeeeec-CCCCeEEEEEc--CCCCcEEEEEec-------CCcE---------EE---EecCCC
Q psy6213 117 S-QDGTMRLFDIRCQESTKIFHS-NTESVRDVEFN--PHSPYAFASVSE-------NGTI---------QQ---WDVRRP 173 (330)
Q Consensus 117 ~-~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~--~~~~~~~~~~~~-------dg~i---------~i---~d~~~~ 173 (330)
. .+..|-..+++..++-+.++. ....+..++|- |+..|+ +.+++ ||.. .+ .|..+.
T Consensus 149 dkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T~yv-~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~tm 227 (638)
T 3sbq_A 149 DKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHTKYV-FANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAETM 227 (638)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBCCEE-EEEECSCEESSCSSSCCCTTSTTEEEEEEEEETTTC
T ss_pred cCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCccEE-EecceeeccCCCCCcccccCChhhceEEEEEcCCcc
Confidence 5 456777788887777665553 44567888886 677764 44432 2221 01 111110
Q ss_pred ccceeeeccCCCCeEEEEEcCCCCEEEEEecCC---------------cEEEEeC-------------------------
Q psy6213 174 EKCFYQFTAHSGPIFACDWHPEHAWLATASRDK---------------TIKVWDL------------------------- 213 (330)
Q Consensus 174 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg---------------~i~i~d~------------------------- 213 (330)
.-..+.. -.+........+++++.++.+.+. .+.++|+
T Consensus 228 ~v~~Qv~--v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD~ 305 (638)
T 3sbq_A 228 EMAFQVI--VDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLDG 305 (638)
T ss_dssp SEEEEEE--ESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEEC
T ss_pred EEEEEEE--cCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEcc
Confidence 0000000 012233445566777777666432 1444443
Q ss_pred CC----CccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCC-----------ccceEeecCCCCeEEE
Q psy6213 214 SI----KPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY-----------IPLASFTEHKDVVSGL 278 (330)
Q Consensus 214 ~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~-----------~~~~~~~~~~~~v~~~ 278 (330)
+. ........+.......+..+|||+++++++. .+.++.++|+++.. ..+.....-.......
T Consensus 306 ~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GK--LsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt 383 (638)
T 3sbq_A 306 RKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGK--LSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHT 383 (638)
T ss_dssp SCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECT--TSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEE
T ss_pred ccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCC--CCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEE
Confidence 22 1122233334455667899999999888888 89999999998421 1111111223467889
Q ss_pred EEecCCCEEEEeecCCeEeeeecc
Q psy6213 279 AWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 279 ~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
+|.++|....|.--|..|.-|+..
T Consensus 384 ~Fd~~G~aYTtlfidSqvvkWni~ 407 (638)
T 3sbq_A 384 TFDGRGNAYTTLFIDSQVVKWNME 407 (638)
T ss_dssp EECSSSEEEEEETTTTEEEEEEHH
T ss_pred EECCCCceEeeeeecceEEEEecc
Confidence 999999655666689999999754
No 348
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=95.12 E-value=1.8 Score=39.05 Aligned_cols=151 Identities=5% Similarity=0.036 Sum_probs=79.7
Q ss_pred CCCEEEEEecC----CcEEEEEeecCceeeee-e------cCCCCeEEEEEcC-CCCcEEEEEecCC------cEEEEec
Q psy6213 109 ESNWLISGSQD----GTMRLFDIRCQESTKIF-H------SNTESVRDVEFNP-HSPYAFASVSENG------TIQQWDV 170 (330)
Q Consensus 109 ~~~~l~~~~~d----~~i~i~d~~~~~~~~~~-~------~~~~~v~~~~~~~-~~~~~~~~~~~dg------~i~i~d~ 170 (330)
++.+++.||.+ ..+.+||..+.+-...- . .....-.+++..+ ++. +++.|+.++ .+.+||.
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~-lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQ-LLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTE-EEEECCBSSTTCBCCCCEEEET
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCE-EEEEcCCCCCCCccccEEEEeC
Confidence 67777787753 46888998876543322 1 1111122333333 554 777777543 4788888
Q ss_pred CCCcc-ceeeeccCCCCeEEEEEcCCCCEEEEEecCC--cEEEEeCCCCccccce----ec-cccceEEEEEcCC-CCeE
Q psy6213 171 RRPEK-CFYQFTAHSGPIFACDWHPEHAWLATASRDK--TIKVWDLSIKPSLEYS----IN-TIASVSRIKWRPQ-RKFH 241 (330)
Q Consensus 171 ~~~~~-~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~----~~-~~~~v~~~~~~~~-~~~l 241 (330)
.+..- .+..+.. ...-.+.+...++++++.|+.++ .+.+||..+..-.... .+ .......+.+..+ ++ +
T Consensus 476 ~t~~W~~~~~~p~-~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~-i 553 (695)
T 2zwa_A 476 KTREWSMIKSLSH-TRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQ-G 553 (695)
T ss_dssp TTTEEEECCCCSB-CCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTE-E
T ss_pred CCCcEEECCCCCC-CcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCE-E
Confidence 76321 1111111 11112333324788888888655 6899998876321111 11 1122334555655 44 4
Q ss_pred EEEeeccc-----CCeEEEEEccCCC
Q psy6213 242 LASCSLVV-----DSSVNVWDIRRPY 262 (330)
Q Consensus 242 ~~~~~~~~-----~~~i~i~d~~~~~ 262 (330)
++.++... .+.+.+||+.+..
T Consensus 554 yv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 554 IILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EEECCcCCCCCeeeCcEEEEEccCCc
Confidence 55444211 2579999998775
No 349
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.98 E-value=1.2 Score=36.13 Aligned_cols=144 Identities=8% Similarity=0.014 Sum_probs=77.0
Q ss_pred CcEEEEEcCCCcEEEEECCCCCCCceeEEeccc-ccceeEEEEE--ecCCCEEEEE-ecCCcEEEEEeecCceeeeeec-
Q psy6213 64 ENHIATGATNGAVVVWNLGQISRSKQERVFNDH-KRTVNKVSFH--YVESNWLISG-SQDGTMRLFDIRCQESTKIFHS- 138 (330)
Q Consensus 64 ~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-~~~i~~i~~~--~~~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~- 138 (330)
++.+++++.||.|.-+|.++ ++..-.+... ..++....-. +.++..++.. +.||.|+.++..+|.....+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~t---G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~ 86 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRN---GHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIR 86 (339)
T ss_dssp EEEEEEEETTSCEEEEETTT---TEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHH
T ss_pred CCEEEEEeCCCeEEEEECCC---CcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccc
Confidence 56788889999999999877 5555555432 1122111100 0122333333 5799999999887754433321
Q ss_pred ---CCCCeEE---EEE-c----CCCCcEEEEEecCCcEEEEecCCCccceeeeccCC--CC-----eEEEEEc-----CC
Q psy6213 139 ---NTESVRD---VEF-N----PHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHS--GP-----IFACDWH-----PE 195 (330)
Q Consensus 139 ---~~~~v~~---~~~-~----~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~-----i~~~~~~-----~~ 195 (330)
...++.. ... . ..+. .+++|+.+|.+...|+++ ++.+..+.... +. ..|.... ..
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~~~g-~Vy~Gs~~g~l~ald~~t-G~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~ 164 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIVEDE-KVYTGSMRTIMYTINMLN-GEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQEC 164 (339)
T ss_dssp HHHTTCSEEEECC----------CCE-EEEECEEEEEEEEEETTT-CCEEEEESTTCBCC--------------------
T ss_pred cceeccccccCCCceeecccccccCC-EEEEEecCCEEEEEECCC-CcEEEEEecCCCcccccccccccccccccccccC
Confidence 1222221 000 0 0233 588999999999999998 55555544221 10 0011110 12
Q ss_pred CCEEEEEecCCcEEEEe
Q psy6213 196 HAWLATASRDKTIKVWD 212 (330)
Q Consensus 196 ~~~l~~~~~dg~i~i~d 212 (330)
+..++.+..+..+.+.+
T Consensus 165 ~~~v~ig~~~y~v~~~~ 181 (339)
T 2be1_A 165 ENMIVIGKTIFELGIHS 181 (339)
T ss_dssp CCEEEEEEEEEECEECC
T ss_pred CCeEEEecceEEEEEEC
Confidence 35677777777777766
No 350
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=94.89 E-value=1.6 Score=37.18 Aligned_cols=238 Identities=11% Similarity=0.059 Sum_probs=110.9
Q ss_pred cceEEEEeeCCC--eeecC-CCeEEEEEcCCcceeee-eceeecccc----ccccceeeeeeccc---CCcEEEEEcC--
Q psy6213 6 PVHKHGLKADNG--LAQPS-RNVFKIFLIKDTEFVET-HNLRVGKNI----NLNFSCNDVAWSCI---EENHIATGAT-- 72 (330)
Q Consensus 6 ~v~~~~~s~~~~--~~~~g-d~~i~iw~~~~~~~~~~-~~~~~~~~~----~~~~~v~~~~~~~~---~~~~l~~~~~-- 72 (330)
.-+.|+|.|||. ++++. .|.|++++.+....... ..+...... .-......|+|+|+ ++.+.++-+.
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 356899999996 67777 99999997543211111 111100000 01233578999982 2344443222
Q ss_pred C----------CcEEEEECCCC--C-----CCceeEEec--ccccceeEEEEEecCCCEEEEEecCC-------------
Q psy6213 73 N----------GAVVVWNLGQI--S-----RSKQERVFN--DHKRTVNKVSFHYVESNWLISGSQDG------------- 120 (330)
Q Consensus 73 d----------g~i~iw~~~~~--~-----~~~~~~~~~--~~~~~i~~i~~~~~~~~~l~~~~~d~------------- 120 (330)
+ ..|.-|.+... . ..+.+..+. ........|.|.| ++.+.++.+..+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgp-DG~LYv~~Gd~~~~~~~~~~~q~~~ 173 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGP-DGFLYIILGDGMITLDDMEEMDGLS 173 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECT-TSCEEEEECCTTCCHHHHHHCTTCC
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECC-CCcEEEEeCCCCCCCCccccccCcC
Confidence 1 13444665431 1 112222221 1223467899998 788777766433
Q ss_pred ----cEEEEEeecC------c-------------eeeeeecCCCCeEEEEEcCC-----CCcEEEEEecCC----cEEEE
Q psy6213 121 ----TMRLFDIRCQ------E-------------STKIFHSNTESVRDVEFNPH-----SPYAFASVSENG----TIQQW 168 (330)
Q Consensus 121 ----~i~i~d~~~~------~-------------~~~~~~~~~~~v~~~~~~~~-----~~~~~~~~~~dg----~i~i~ 168 (330)
.|.-.|.+.. . ....+...-.....++|+|. +...+..+...| .-.|.
T Consensus 174 ~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei~ 253 (463)
T 2wg3_C 174 DFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSDSNGKNRSSARIL 253 (463)
T ss_dssp SCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEECC------CEEEE
T ss_pred CCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecccCCCCCCCCeEe
Confidence 2333333321 0 01112111223456889987 331133332112 12333
Q ss_pred ecCCCc-----cceeeeccCC-CCeEEEEEcC-------CCCEEEEEecCCcEEEEeCCCCccc--ccee----------
Q psy6213 169 DVRRPE-----KCFYQFTAHS-GPIFACDWHP-------EHAWLATASRDKTIKVWDLSIKPSL--EYSI---------- 223 (330)
Q Consensus 169 d~~~~~-----~~~~~~~~~~-~~i~~~~~~~-------~~~~l~~~~~dg~i~i~d~~~~~~~--~~~~---------- 223 (330)
.+..+. .++..+..|. ..+..+.|-. .+.+|+ +...+.|....+...... ....
T Consensus 254 ~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~-~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~ 332 (463)
T 2wg3_C 254 QIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVF-GDRNGNFLTLQQSPVTKQWQEKPLCLGTSGSCRG 332 (463)
T ss_dssp EEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEEE-EETTSCEEEEEC-----CCEEEEECEEETTSSCS
T ss_pred eeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEEE-ecCCCcEEEEEeCCCCceeeEEEeecCCcccccc
Confidence 332211 2344444332 4677777753 234444 444577666665433111 1111
Q ss_pred ccccceEEEEEcCCCCeEEEEe
Q psy6213 224 NTIASVSRIKWRPQRKFHLASC 245 (330)
Q Consensus 224 ~~~~~v~~~~~~~~~~~l~~~~ 245 (330)
.....+..+...|||..+++..
T Consensus 333 ~~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 333 YFSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp CCCSEEEEEEECTTCCEEEEEE
T ss_pred cccCcceEEEECCCCCEEEEec
Confidence 1235789999999998655553
No 351
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.56 E-value=1.7 Score=36.01 Aligned_cols=242 Identities=9% Similarity=-0.049 Sum_probs=111.8
Q ss_pred ceeeeeecccCCcEEEEEcCCC----cEEEEECCCCCCCceeEE---ecc--------cccceeEEEEEecC-CCEEEEE
Q psy6213 53 SCNDVAWSCIEENHIATGATNG----AVVVWNLGQISRSKQERV---FND--------HKRTVNKVSFHYVE-SNWLISG 116 (330)
Q Consensus 53 ~v~~~~~~~~~~~~l~~~~~dg----~i~iw~~~~~~~~~~~~~---~~~--------~~~~i~~i~~~~~~-~~~l~~~ 116 (330)
.|.++++.|.+.+.+.++...| .|...+ +.....+.... +.. ....|.++++.|.+ ...+..+
T Consensus 56 ~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g 134 (394)
T 3b7f_A 56 TIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAG 134 (394)
T ss_dssp EEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEE
T ss_pred ceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEE
Confidence 4789999885556666666555 343321 22111222211 110 11257788888643 5566666
Q ss_pred ecCCcEEEEEeecCceeeeee-------------------cCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccce
Q psy6213 117 SQDGTMRLFDIRCQESTKIFH-------------------SNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCF 177 (330)
Q Consensus 117 ~~d~~i~i~d~~~~~~~~~~~-------------------~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~ 177 (330)
+..+.|...+- .++.-..+. .....+.++.++|..+..+..+..++.|...+ ..++..
T Consensus 135 ~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~--DgG~tW 211 (394)
T 3b7f_A 135 TSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST--DAGTDW 211 (394)
T ss_dssp EETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES--STTSSC
T ss_pred ecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC--CCCCCc
Confidence 66665554432 122211111 01235788999985332355555445444432 222222
Q ss_pred eeecc-----C--------CCCeEEEEEcCC-CCEEEEEecCCcEEEEeCCCC--ccccceecc--ccceEEEEEcCC-C
Q psy6213 178 YQFTA-----H--------SGPIFACDWHPE-HAWLATASRDKTIKVWDLSIK--PSLEYSINT--IASVSRIKWRPQ-R 238 (330)
Q Consensus 178 ~~~~~-----~--------~~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~--~~~~~~~~~--~~~v~~~~~~~~-~ 238 (330)
..+.. + ...+.++.++|+ ...+..+...+ |...+-... +........ ...+..++++|. .
T Consensus 212 ~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~ 290 (394)
T 3b7f_A 212 KPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDRREGVWKRIGDAMPREVGDIGFPIVVHQRDP 290 (394)
T ss_dssp EECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEETTTTEEECGGGGSCTTTCSCEEEEEECSSCT
T ss_pred eECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCCCCCcceECCCCCCCCCccceEEEEECCCCC
Confidence 22110 0 124889999985 35666666544 444432221 111110111 023567888763 3
Q ss_pred CeEEEEeecc--------cCCeEEEEEccCCCccceEee-cCCC-------CeEEEEEec-CCCEEEEeecCCeEeee
Q psy6213 239 KFHLASCSLV--------VDSSVNVWDIRRPYIPLASFT-EHKD-------VVSGLAWRG-DPQLFIASSRVSIIPRA 299 (330)
Q Consensus 239 ~~l~~~~~~~--------~~~~i~i~d~~~~~~~~~~~~-~~~~-------~v~~~~~~~-~~~~l~s~~~dg~i~iw 299 (330)
..++++.... .++...+|....+...-..+. +-.. ....++++| +...|+.++.++.|..-
T Consensus 291 ~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S 368 (394)
T 3b7f_A 291 RTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWAS 368 (394)
T ss_dssp TCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEE
T ss_pred CEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 3344443100 123345665554322122221 1010 113578887 34556667666666653
No 352
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=94.00 E-value=2.2 Score=35.25 Aligned_cols=215 Identities=8% Similarity=-0.038 Sum_probs=100.2
Q ss_pred CcEEEEEcCCCcEEEEECCC-CCCCceeEEecccccceeEEEEEecCCCEEEEEecCC----cEEEEEeecCceeeeee-
Q psy6213 64 ENHIATGATNGAVVVWNLGQ-ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDG----TMRLFDIRCQESTKIFH- 137 (330)
Q Consensus 64 ~~~l~~~~~dg~i~iw~~~~-~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~- 137 (330)
...|.+|...| +.+++... ......... ......|.+|++.|.+...+.+++..| .|...+ +.++.-..+.
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~-~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~ 98 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGP-VFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATR 98 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEE-ESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSB
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCc-cCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCc
Confidence 55777788777 55555432 111222211 123457999999875555566666555 444332 2222211111
Q ss_pred -----c--------CCCCeEEEEEcCCC-CcEEEEEecCCcEEEEecCCCccceeeec-------------------cCC
Q psy6213 138 -----S--------NTESVRDVEFNPHS-PYAFASVSENGTIQQWDVRRPEKCFYQFT-------------------AHS 184 (330)
Q Consensus 138 -----~--------~~~~v~~~~~~~~~-~~~~~~~~~dg~i~i~d~~~~~~~~~~~~-------------------~~~ 184 (330)
. ....|.++++.|.+ +..+.++...+.|...+-. +.....+. ...
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~Dg--G~tW~~~~~~~~~p~~~~~~~~~~~g~~~~ 176 (394)
T 3b7f_A 99 PPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRSTDH--GASWEPVAGFNDHPMRRAWTGGEQDGTPDG 176 (394)
T ss_dssp CCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEESST--TSBCEECHHHHTCTTHHHHHCCC----CCC
T ss_pred cccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEcCC--CCCeEECcCccCCccccccccccccCCCCC
Confidence 0 11247788898742 2246666666655554322 22221111 012
Q ss_pred CCeEEEEEcCC-CCEEEEEecCCcEEEEeCCCCcccccee--------c-----cccceEEEEEcCCC-CeEEEEeeccc
Q psy6213 185 GPIFACDWHPE-HAWLATASRDKTIKVWDLSIKPSLEYSI--------N-----TIASVSRIKWRPQR-KFHLASCSLVV 249 (330)
Q Consensus 185 ~~i~~~~~~~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~--------~-----~~~~v~~~~~~~~~-~~l~~~~~~~~ 249 (330)
..+.+|.++|. ...++.+..++.|...+-. ++.-.... + ....+..+.++|.. ..+++ +.
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~s~Dg-G~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~v-g~--- 251 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVFESTDA-GTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQ-QN--- 251 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEEEESST-TSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEE-EE---
T ss_pred CceeEEEECCCCCCEEEEEECCCCEEEECCC-CCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEE-Ec---
Confidence 35788999883 3445555544444443322 11111000 0 01348899999873 33444 43
Q ss_pred CCeEEEEEccCCCccceEeec--CC---CCeEEEEEec-CCCEEEEe
Q psy6213 250 DSSVNVWDIRRPYIPLASFTE--HK---DVVSGLAWRG-DPQLFIAS 290 (330)
Q Consensus 250 ~~~i~i~d~~~~~~~~~~~~~--~~---~~v~~~~~~~-~~~~l~s~ 290 (330)
.+.|...+-. ++. ...+.. .. ..+..++++| +...|..+
T Consensus 252 ~~gl~~s~D~-G~t-W~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~ 296 (394)
T 3b7f_A 252 HCGIYRMDRR-EGV-WKRIGDAMPREVGDIGFPIVVHQRDPRTVWVF 296 (394)
T ss_dssp TTEEEEEETT-TTE-EECGGGGSCTTTCSCEEEEEECSSCTTCEEEE
T ss_pred CCeEEEeCCC-CCc-ceECCCCCCCCCccceEEEEECCCCCCEEEEE
Confidence 4445444321 211 111111 11 2356788876 34445444
No 353
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.64 E-value=2.1 Score=33.66 Aligned_cols=182 Identities=10% Similarity=0.008 Sum_probs=101.5
Q ss_pred cceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccce
Q psy6213 98 RTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCF 177 (330)
Q Consensus 98 ~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~ 177 (330)
..|..++.. ....++. . ||.|+.|-.+..-.+..-......|..++..... .++. . ||.|+.|-....++.-
T Consensus 24 ~~i~~ia~G--~~h~~~l-~-~G~v~~wG~n~~Gqlg~p~~~~~~i~~ia~G~~h--s~~l-~-~G~v~~wG~n~~Gqlg 95 (282)
T 3qhy_B 24 SGVDAIAGG--YFHGLAL-K-GGKVLGWGANLNGQLTMPAATQSGVDAIAAGNYH--SLAL-K-DGEVIAWGGNEDGQTT 95 (282)
T ss_dssp SSCCEEEEC--SSEEEEE-E-TTEEEEEECCSSSTTSCCGGGGSCCCEEEECSSE--EEEE-E-TTEEEEEECCTTSTTC
T ss_pred CCCcEEEeC--CCeEEEE-E-CCEEEEEeCCCCCCCCCCccCCCCEEEEEeCCCE--EEEE-E-CCEEEEeeCCCCCCCC
Confidence 357777654 2333444 5 8999999866433222111123357777665443 3444 4 8999999876533321
Q ss_pred eeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccccceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEE
Q psy6213 178 YQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWD 257 (330)
Q Consensus 178 ~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d 257 (330)
.. ..-...|..++...+. .+.-. ||.+..|-.....++-........+..++..... .++ -. +|.++.|-
T Consensus 96 ~P-~~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~--~~~-l~---~G~v~~wG 165 (282)
T 3qhy_B 96 VP-AEARSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT--ALA-VK---NGGVIAWG 165 (282)
T ss_dssp CC-GGGSSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE--EEE-EE---TTEEEEEE
T ss_pred CC-cccCCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE--EEE-EE---CCEEEEec
Confidence 11 1113467777776443 33334 8999999876543333333334567777655442 222 23 78899997
Q ss_pred ccCCCccceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeec
Q psy6213 258 IRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKN 301 (330)
Q Consensus 258 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~ 301 (330)
.....+ +.....-...|..++...+. .++ - .||.|+.|-.
T Consensus 166 ~n~~gq-lg~p~~~~~~v~~i~~G~~h-s~a-l-~~G~v~~wG~ 205 (282)
T 3qhy_B 166 DNYFGQ-TTVPAEAQSGVDDVAGGIFH-SLA-L-KDGKVIAWGD 205 (282)
T ss_dssp CCTTST-TSCCGGGGSSEEEEEECSSE-EEE-E-ETTEEEEEEC
T ss_pred CCCCCC-CCCceecCCCeEEEEecCCE-EEE-E-ECCeEEEEEC
Confidence 664333 21111223567777765433 233 3 5999999964
No 354
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=92.56 E-value=4.4 Score=34.46 Aligned_cols=105 Identities=9% Similarity=0.045 Sum_probs=57.4
Q ss_pred eeeeecccCCc-EEEEEcCCCcEEEEECCCCCCCceeEEec---------ccccceeEEEEEec---CCCEEEEEecC--
Q psy6213 55 NDVAWSCIEEN-HIATGATNGAVVVWNLGQISRSKQERVFN---------DHKRTVNKVSFHYV---ESNWLISGSQD-- 119 (330)
Q Consensus 55 ~~~~~~~~~~~-~l~~~~~dg~i~iw~~~~~~~~~~~~~~~---------~~~~~i~~i~~~~~---~~~~l~~~~~d-- 119 (330)
..|+|.| ++. .++++...|.|++++.........+..+. ........|+++|+ ++.+.++-+.+
T Consensus 17 ~~~a~~p-dG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 17 VGALHSG-DGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEECCS-SSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred eEEEECC-CCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 7899999 775 55566778999999754311111222221 11356788999982 23444433321
Q ss_pred ----------CcEEEEEeecC----------ceeeeee--cCCCCeEEEEEcCCCCcEEEEEec
Q psy6213 120 ----------GTMRLFDIRCQ----------ESTKIFH--SNTESVRDVEFNPHSPYAFASVSE 161 (330)
Q Consensus 120 ----------~~i~i~d~~~~----------~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~ 161 (330)
..|.-|.+..+ +.+..+. .....-..|+|.|++. |+++.++
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd 158 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGD 158 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECC
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCC
Confidence 13444555321 1222222 1223467899999997 6666554
No 355
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=91.78 E-value=7.8 Score=35.59 Aligned_cols=147 Identities=10% Similarity=0.123 Sum_probs=76.4
Q ss_pred ceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecc-------cccceeEEEEEecCCCEEEEEecCCc----
Q psy6213 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFND-------HKRTVNKVSFHYVESNWLISGSQDGT---- 121 (330)
Q Consensus 53 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~-------~~~~i~~i~~~~~~~~~l~~~~~d~~---- 121 (330)
.|.+++++|.+...++++...+.|...+= . ++....+.. ....+.++++.|.+.+.++.+..+..
T Consensus 16 ~i~~i~~~p~~~~~~~a~~~~ggv~rS~D-g---G~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~ 91 (789)
T 1sqj_A 16 YITGIVAHPKTKDLLYARTDIGGAYRWDA-G---TSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEW 91 (789)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEET-T---TTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSC
T ss_pred cEEEEEECCCCCCEEEEEecCCCEEEecC-C---CCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcc
Confidence 47899999966777888877776654432 2 222222222 12469999998855555555543311
Q ss_pred EEEEEee-cCceeeeeec---------CCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeecc------CCC
Q psy6213 122 MRLFDIR-CQESTKIFHS---------NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA------HSG 185 (330)
Q Consensus 122 i~i~d~~-~~~~~~~~~~---------~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~------~~~ 185 (330)
-.||-.. .++.=..... ....+..++++|.....++.+...+. +|-....++.-..... ...
T Consensus 92 ~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG~TW~~~~~~~~~~~~~~ 169 (789)
T 1sqj_A 92 AAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRAKTWTNVTSIPDAFTNGI 169 (789)
T ss_dssp CEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTTSSCEEETTSCCCCSTTT
T ss_pred cEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCCcccCCCccCccccCCCC
Confidence 3333322 2322111111 01135678888865545666664443 3333332332222221 124
Q ss_pred CeEEEEEcCC-CCEEEEEecC
Q psy6213 186 PIFACDWHPE-HAWLATASRD 205 (330)
Q Consensus 186 ~i~~~~~~~~-~~~l~~~~~d 205 (330)
.+..+.++|. +..++.+..+
T Consensus 170 ~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 170 GYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CEEEEEECTTSTTCEEEEESS
T ss_pred CeEEEEECCCCCCEEEEEEcC
Confidence 5788999884 4456666554
No 356
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=91.68 E-value=5 Score=33.16 Aligned_cols=228 Identities=14% Similarity=0.134 Sum_probs=117.2
Q ss_pred CCcEEEEEcCCCcEEEEECCCCCC--------CceeEEecc-cccceeEEEEEecCCCEEEEEecCCcEEEEEeecCce-
Q psy6213 63 EENHIATGATNGAVVVWNLGQISR--------SKQERVFND-HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQES- 132 (330)
Q Consensus 63 ~~~~l~~~~~dg~i~iw~~~~~~~--------~~~~~~~~~-~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~- 132 (330)
.....+.-..||.|..|-.....+ ......+.. ....+..++.+. .....+.-..||.|+.|-....-.
T Consensus 61 G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~-G~~h~~al~~~G~v~~wG~n~~GqL 139 (389)
T 3kci_A 61 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNS-GGKHCLALSSEGEVYSWGEAEDGKL 139 (389)
T ss_dssp ETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECT-TCSEEEEEETTSCEEEEECCGGGTT
T ss_pred CCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECc-CCCeEEEEcCCCCEEEEeCCCCCcC
Confidence 445556667789999997543211 011111111 122344456654 666777778899999996542111
Q ss_pred ----------eeeeec-CCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccc----------eeeec-cCCCCeEEE
Q psy6213 133 ----------TKIFHS-NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC----------FYQFT-AHSGPIFAC 190 (330)
Q Consensus 133 ----------~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~----------~~~~~-~~~~~i~~~ 190 (330)
...+.. ....|..++.... ..++-..+|.|+.|-....++. ...+. .....|..+
T Consensus 140 G~g~~~~~~~p~~v~~l~~~~i~~va~G~~---hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~i 216 (389)
T 3kci_A 140 GHGNRSPCDRPRVIESLRGIEVVDVAAGGA---HSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDI 216 (389)
T ss_dssp CSSSCCCEEEEEECGGGTTSCEEEEEECSS---EEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEE
T ss_pred CCCCCccCcCCeEecccCCCeEEEEEeCcC---eEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEE
Confidence 111111 2235666654332 3555677899999975432211 11111 122356666
Q ss_pred EEcCCCCEEEEEecCCcEEEEeCCCCcccc----------ceec--cccceEEEEEcCCCCeEEEEeecccCCeEEEEEc
Q psy6213 191 DWHPEHAWLATASRDKTIKVWDLSIKPSLE----------YSIN--TIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258 (330)
Q Consensus 191 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~----------~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~ 258 (330)
+........+.-..||.|..|-.....++- .... ....+..++.... +.++.. .+|.|+.|=.
T Consensus 217 a~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~--hs~alt---~~G~v~~wG~ 291 (389)
T 3kci_A 217 ACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQ--FSVALT---KSGAVYTWGK 291 (389)
T ss_dssp EECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETT--EEEEEE---TTSCEEEEEC
T ss_pred EEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCC--EEEEEe---CCCeEEEEeC
Confidence 664433566677789999999754321110 0001 1123555555433 223433 4899999965
Q ss_pred cCCCc-------cc---eEeec-CCCCeEEEEEecCCCEEEEeecCCeEeeeec
Q psy6213 259 RRPYI-------PL---ASFTE-HKDVVSGLAWRGDPQLFIASSRVSIIPRAKN 301 (330)
Q Consensus 259 ~~~~~-------~~---~~~~~-~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~ 301 (330)
....+ .. ..+.. ....|..++.. ....+....||.|+.|-.
T Consensus 292 n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G--~~h~~al~~~G~v~~wG~ 343 (389)
T 3kci_A 292 GDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG--SLHCVCCTEDGEVYTWGD 343 (389)
T ss_dssp CGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEEC--SSEEEEEETTCCEEEEEC
T ss_pred CCCCCCCCCCCccccCCeEeccCCCCCEEEEEec--cCeEEEECCCCCEEEeeC
Confidence 32111 00 11111 12346666653 344555678999999953
No 357
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=90.73 E-value=9.3 Score=34.56 Aligned_cols=241 Identities=10% Similarity=0.117 Sum_probs=121.9
Q ss_pred EEE-EeeCCCeeecC-------CCeEEEEEcCCcceeeeeceeeccc---cccccceeeeeecccCCcEEEEEc------
Q psy6213 9 KHG-LKADNGLAQPS-------RNVFKIFLIKDTEFVETHNLRVGKN---INLNFSCNDVAWSCIEENHIATGA------ 71 (330)
Q Consensus 9 ~~~-~s~~~~~~~~g-------d~~i~iw~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~l~~~~------ 71 (330)
.+. ++||+++++.+ -..++++|+++++.+..--....+. .... ...++|.. ++..+++..
T Consensus 133 g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~--~~~~~W~d-~~~~~~~~~~~~~~~ 209 (711)
T 4hvt_A 133 GVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGK--FTYPTWIN-KDTIIFNLVLHKNEI 209 (711)
T ss_dssp EEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEE--TCCEEEEE-TTEEEECCCCSTTCB
T ss_pred ceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccc--cceeeEEC-CCEEEEEeCCCCCCc
Confidence 444 88999984333 3479999999988763210011000 0000 12347864 445444321
Q ss_pred ----CCCcEEEEECCCCCCCceeEEecccccce-eEEEEEecCCC-----EEEEEecC---CcEEEEEeec--Cceeeee
Q psy6213 72 ----TNGAVVVWNLGQISRSKQERVFNDHKRTV-NKVSFHYVESN-----WLISGSQD---GTMRLFDIRC--QESTKIF 136 (330)
Q Consensus 72 ----~dg~i~iw~~~~~~~~~~~~~~~~~~~~i-~~i~~~~~~~~-----~l~~~~~d---~~i~i~d~~~--~~~~~~~ 136 (330)
....|+.|.+.+.. ..-...+.+....+ .....++ ++. .+++.+.+ ..+++.|... ++ ...+
T Consensus 210 ~~~~~~~~v~~~~~Gt~~-~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l 286 (711)
T 4hvt_A 210 TSSLYPNSLYIWKRGESI-EKAKKLFEVPKEYIYVSAGKLL-SDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKI 286 (711)
T ss_dssp CTTSSBCEEEEEETTSCG-GGCEEEEECCTTSCEEEEEESS-CTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEEC
T ss_pred CcCCCCCEEEEEECCCCh-HHCeEEeccCCCceEEEEEEec-CCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEe
Confidence 12468888887632 12223343333332 2233344 333 34444322 3456666543 32 2222
Q ss_pred ecCCCCeEEEEEcCCCCcEEEEE----------ecCCcEEEEecCCCc------cceee-ecc-CCCCeEEEEEcCCCCE
Q psy6213 137 HSNTESVRDVEFNPHSPYAFASV----------SENGTIQQWDVRRPE------KCFYQ-FTA-HSGPIFACDWHPEHAW 198 (330)
Q Consensus 137 ~~~~~~v~~~~~~~~~~~~~~~~----------~~dg~i~i~d~~~~~------~~~~~-~~~-~~~~i~~~~~~~~~~~ 198 (330)
...... .+..+.++. +++.. ...+.|...|+.+.. ..... +.. ....+..+.+..+ .+
T Consensus 287 ~~~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l 362 (711)
T 4hvt_A 287 NMPSDA--TLQGSFKEY-VFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RV 362 (711)
T ss_dssp CSCTTC--EEEEEETTE-EEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CE
T ss_pred ecCCcc--eEeeeECCE-EEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EE
Confidence 222221 123344554 34422 246779999987631 12222 322 2345778888865 56
Q ss_pred EEEEecCCc--EEEEeCCCCc-ccc--ceeccccceEEEEEcCCCCeEEEEee-cccCCeEEEEEcc
Q psy6213 199 LATASRDKT--IKVWDLSIKP-SLE--YSINTIASVSRIKWRPQRKFHLASCS-LVVDSSVNVWDIR 259 (330)
Q Consensus 199 l~~~~~dg~--i~i~d~~~~~-~~~--~~~~~~~~v~~~~~~~~~~~l~~~~~-~~~~~~i~i~d~~ 259 (330)
+++...++. +.++|+.++. ... ...+..+.+.....++++..++...+ ...-+.+..+|+.
T Consensus 363 ~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 363 FLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 777777765 6777766553 111 11222345777777788766555543 2234778888876
No 358
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=88.22 E-value=15 Score=33.42 Aligned_cols=194 Identities=8% Similarity=-0.056 Sum_probs=88.9
Q ss_pred cceEEEEeeCC--CeeecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCC-------Cc
Q psy6213 6 PVHKHGLKADN--GLAQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATN-------GA 75 (330)
Q Consensus 6 ~v~~~~~s~~~--~~~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-------g~ 75 (330)
.|..++++|.. .+++.. .+.|...+-. ++--..+........--...+.++++.|.+.+.++++... +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~-G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPS-TETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETT-TTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCC-CCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 79999999974 334444 5555444322 3222221111110000013478999998555555555421 12
Q ss_pred EEEEECCCCC-CCceeEEeccc-------ccceeEEEEEecCCCEEEEEecCCcEEEEEee-cCceeeeee---c-----
Q psy6213 76 VVVWNLGQIS-RSKQERVFNDH-------KRTVNKVSFHYVESNWLISGSQDGTMRLFDIR-CQESTKIFH---S----- 138 (330)
Q Consensus 76 i~iw~~~~~~-~~~~~~~~~~~-------~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~---~----- 138 (330)
..||...... ..+... .... ...+..+++.|.+.+.++.+...|. -+|--. .++.-..+. .
T Consensus 103 ~~l~~S~DgG~TW~~~~-~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~-gl~~S~DgG~tW~~~~~~~~~~~~~ 180 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTI-LPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGN-GLWRSTDYGVTWSKVESFPNPGTYI 180 (737)
T ss_dssp CEEEEESSSSSSCEEEE-CSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTC-CEEEESSTTSSCEECTTCCCCCCCB
T ss_pred ccEEEeCCCCCCcccCC-CCcccCCCcCcccccceEEECCCCCCEEEEeeccCC-cEEEeCCCCcceecccCCCCCcccc
Confidence 4555544322 222222 1110 0124678999877777777764311 233222 222111111 1
Q ss_pred ---------CCCCeEEEEEcCCCC------cEEEEEecCCcEEEEecCCCccceeeeccCC-CC-eEEEEEcCCCCEEEE
Q psy6213 139 ---------NTESVRDVEFNPHSP------YAFASVSENGTIQQWDVRRPEKCFYQFTAHS-GP-IFACDWHPEHAWLAT 201 (330)
Q Consensus 139 ---------~~~~v~~~~~~~~~~------~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~~-i~~~~~~~~~~~l~~ 201 (330)
....+..+.++|... ..+.++..++.-.+|-....++.-..+.... .. ...+.++|++.+.++
T Consensus 181 ~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~ 260 (737)
T 2cn3_A 181 YDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGMLYIT 260 (737)
T ss_dssp SCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESSTTSCCEECTTCCCSSEEEEEEECTTSEEEEE
T ss_pred cCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCCCCceEECCCCCCcccceEEEECCCCeEEEE
Confidence 112367788887542 1355555454323454443333333222111 11 244567776665555
Q ss_pred E
Q psy6213 202 A 202 (330)
Q Consensus 202 ~ 202 (330)
.
T Consensus 261 ~ 261 (737)
T 2cn3_A 261 Y 261 (737)
T ss_dssp E
T ss_pred e
Confidence 4
No 359
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=88.14 E-value=13 Score=34.96 Aligned_cols=33 Identities=27% Similarity=0.235 Sum_probs=28.7
Q ss_pred CeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcc
Q psy6213 186 PIFACDWHPEHAWLATASRDKTIKVWDLSIKPS 218 (330)
Q Consensus 186 ~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~ 218 (330)
.+.+++..++..++++-+.|+++|+|++.+++.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQC 269 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCe
Confidence 467777888889999999999999999998854
No 360
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=85.70 E-value=22 Score=32.70 Aligned_cols=154 Identities=6% Similarity=-0.039 Sum_probs=73.3
Q ss_pred cccceEEEEeeCCCe--eecC-CCeEEEEEcCCcceeeeeceeeccccccccceeeeeecccCCcEEEEEcCCCc----E
Q psy6213 4 LSPVHKHGLKADNGL--AQPS-RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGA----V 76 (330)
Q Consensus 4 ~~~v~~~~~s~~~~~--~~~g-d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~----i 76 (330)
.+.|.+++++|...- ++.+ .+.|...+ +.++--...........-....+.++++.|.+.+.++++..+.. -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 367999999997433 4444 56554443 23332222211110000012347899998844555555543211 3
Q ss_pred EEEECCCCCCCceeEEecc---------cccceeEEEEEecCCCEEEEEecCCcEEEEEee-cCceeeeee------cCC
Q psy6213 77 VVWNLGQISRSKQERVFND---------HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR-CQESTKIFH------SNT 140 (330)
Q Consensus 77 ~iw~~~~~~~~~~~~~~~~---------~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~------~~~ 140 (330)
.||..... ++....... ....+..+++.|.+.+.+..+...+.| |-.. .++.=..+. ...
T Consensus 93 ~v~~S~Dg--G~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG~TW~~~~~~~~~~~~~ 168 (789)
T 1sqj_A 93 AFYVSEDR--GQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDRAKTWTNVTSIPDAFTNG 168 (789)
T ss_dssp EEEEESST--TSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESSTTSSCEEETTSCCCCSTT
T ss_pred EEEEECCC--CCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCCCcccCCCccCccccCCC
Confidence 34443332 222222111 011356788888556677776644443 3222 222211111 112
Q ss_pred CCeEEEEEcCCCCcEEEEEecC
Q psy6213 141 ESVRDVEFNPHSPYAFASVSEN 162 (330)
Q Consensus 141 ~~v~~~~~~~~~~~~~~~~~~d 162 (330)
..+..+.++|.....++++..+
T Consensus 169 ~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 169 IGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TCEEEEEECTTSTTCEEEEESS
T ss_pred CCeEEEEECCCCCCEEEEEEcC
Confidence 4578899998654345555544
No 361
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=82.15 E-value=18 Score=29.00 Aligned_cols=232 Identities=11% Similarity=0.046 Sum_probs=122.8
Q ss_pred CCcEEEEEcCCCcEEEEECCCCCC-CceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeec---------Cce
Q psy6213 63 EENHIATGATNGAVVVWNLGQISR-SKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC---------QES 132 (330)
Q Consensus 63 ~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~---------~~~ 132 (330)
+...+++.+.+|.|+--.+..... ......+... +.+..+.... ..+.++..+..|.++-+.... |.+
T Consensus 4 ~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~-D~l~~~~~~~-t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 4 SEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDT-DRLLAMLEMN-TKDVLLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp CCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTT-CCEEEEEEEE-TTSEEEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred CCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCC-CEEEEEEEEC-CCCEEEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 677888999999998776543100 1111123333 3344444443 567777778889877665421 221
Q ss_pred eee---eecCCCCeEEEEEcCC---CCcEEEEEecCCcEEEEecCCC-------ccceeeeccCCCCeEEEEEcCCCCEE
Q psy6213 133 TKI---FHSNTESVRDVEFNPH---SPYAFASVSENGTIQQWDVRRP-------EKCFYQFTAHSGPIFACDWHPEHAWL 199 (330)
Q Consensus 133 ~~~---~~~~~~~v~~~~~~~~---~~~~~~~~~~dg~i~i~d~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~l 199 (330)
+.. +. ....|..+...++ +. .++.++.+|.++...+..- +.....+.. .+.+..+........+
T Consensus 82 i~~~i~L~-~~e~Iv~~~~~~~~~~~~-~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~~i 158 (323)
T 1wp5_A 82 IANIIPID-RDEEIIKAIPINDFELNG-YFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMNEL 158 (323)
T ss_dssp GGGTSCCC-TTCCEEEEEEESCTTSSC-EEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCSEE
T ss_pred hhhccCCC-CCCEEEEEEEecccCCCc-eEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCCEE
Confidence 111 22 2344655433332 44 4778899999999877521 111122332 2555555555555678
Q ss_pred EEEecCCcEEEEeCCCCccc--------cceeccccceEEEEEcCCCC-eEEEEeecccCCeEEEEEccCCC------cc
Q psy6213 200 ATASRDKTIKVWDLSIKPSL--------EYSINTIASVSRIKWRPQRK-FHLASCSLVVDSSVNVWDIRRPY------IP 264 (330)
Q Consensus 200 ~~~~~dg~i~i~d~~~~~~~--------~~~~~~~~~v~~~~~~~~~~-~l~~~~~~~~~~~i~i~d~~~~~------~~ 264 (330)
+..+.+|.+..++...-+.. .........|..+...+++. .++... ..|..+..++..-. .-
T Consensus 159 ~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt---~~G~gKr~~~~e~~~~~Rg~kG 235 (323)
T 1wp5_A 159 FLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVAT---QRGAVKKMKLTEFEKATRAKRG 235 (323)
T ss_dssp EEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEE---TTSEEEEEEGGGSCCCCTTSCC
T ss_pred EEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEE---CCCceEEEEHHHccccCCCCCC
Confidence 88888999888876543211 11112334566664434444 555554 48888887775311 00
Q ss_pred ceE---eecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 265 LAS---FTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 265 ~~~---~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
+.. +......+.++....++..++..+..|.+......
T Consensus 236 v~~~~~~~~~~~~l~~~~~v~~~~~i~~it~~g~~ir~~~~ 276 (323)
T 1wp5_A 236 VVILRELKANPHRISGFVVAQDSDTIYLQTEKSFIETIKVG 276 (323)
T ss_dssp EECSCCCSSSCCCEEEEEEECTTCEEEEEETTSCEEEEEGG
T ss_pred EECeeecCCCCceEEEEEEeCCCCeEEEEeCCCeEEEEEhh
Confidence 111 21222245544333334556667777776655443
No 362
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=81.94 E-value=20 Score=29.47 Aligned_cols=204 Identities=9% Similarity=0.073 Sum_probs=110.6
Q ss_pred cceEEEEeeCCCe--eecC---------------CCeEEEEEcCCc--ceeeeeceeeccccccccceeeeeec---cc-
Q psy6213 6 PVHKHGLKADNGL--AQPS---------------RNVFKIFLIKDT--EFVETHNLRVGKNINLNFSCNDVAWS---CI- 62 (330)
Q Consensus 6 ~v~~~~~s~~~~~--~~~g---------------d~~i~iw~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~~~---~~- 62 (330)
.|..+...+++++ +=+| .-+|.+||+.++ +..+.+.++...... ......+++. |.
T Consensus 88 sV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~-~S~l~di~VD~~~~~~ 166 (381)
T 3q6k_A 88 SIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEK-PTYFGGFAVDVANPKG 166 (381)
T ss_dssp CEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCC-GGGEEEEEEEESCTTT
T ss_pred EeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhccc-CCccceEEEecccCCC
Confidence 4667777777766 3333 226889999999 888888876544332 2335777776 21
Q ss_pred --CCcEEEEEc-CCCcEEEEECCCCCCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeecC
Q psy6213 63 --EENHIATGA-TNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSN 139 (330)
Q Consensus 63 --~~~~l~~~~-~dg~i~iw~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 139 (330)
++.+...+. ..+.|.++|+.+ ++..+.+. .. |.| +....++. +|.-.- +
T Consensus 167 ~c~~~~aYItD~~~~gLIVydl~~---~~swRv~~--~~------~~p-d~~~~~~i--~G~~~~-----------~--- 218 (381)
T 3q6k_A 167 DCSETFVYITNFLRGALFIYDHKK---QDSWNVTH--PT------FKA-ERPTKFDY--GGKEYE-----------F--- 218 (381)
T ss_dssp TSCSEEEEEEETTTTEEEEEETTT---TEEEEEEC--GG------GSC-CSCEEEEE--TTEEEE-----------E---
T ss_pred CCCccEEEEEcCCCCcEEEEECCC---CcEEEEcc--CC------Ccc-ccCcceEE--CCEEeE-----------e---
Confidence 134444443 467799999988 55555442 11 234 21111111 222111 1
Q ss_pred CCCeEEEEEcCC----CCcEEEEEecCCcEEEEe---cCCC--ccceeeeccCC---CCeEEEEEc-CCCCEEEEEecCC
Q psy6213 140 TESVRDVEFNPH----SPYAFASVSENGTIQQWD---VRRP--EKCFYQFTAHS---GPIFACDWH-PEHAWLATASRDK 206 (330)
Q Consensus 140 ~~~v~~~~~~~~----~~~~~~~~~~dg~i~i~d---~~~~--~~~~~~~~~~~---~~i~~~~~~-~~~~~l~~~~~dg 206 (330)
...+..++++|+ ++.+....-....++--. +++. ...++.+ +.. ..-..++.. .+|.++++--...
T Consensus 219 ~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~~D~~~G~ly~~~~~~~ 297 (381)
T 3q6k_A 219 KAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIALAYDPKTKVIFFAEANTK 297 (381)
T ss_dssp CCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEEEECTTTCEEEEEESSSS
T ss_pred ccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEe-eecCCCCCcceEEEeCCCCeEEEEeccCC
Confidence 245888999987 665444443333333332 2221 1111212 122 233456675 6788888888889
Q ss_pred cEEEEeCCC-Cc---c--ccceeccccceEEEEEcCCCC
Q psy6213 207 TIKVWDLSI-KP---S--LEYSINTIASVSRIKWRPQRK 239 (330)
Q Consensus 207 ~i~i~d~~~-~~---~--~~~~~~~~~~v~~~~~~~~~~ 239 (330)
.|..|+..+ .- . .......-..+..+.+.++|.
T Consensus 298 aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~ 336 (381)
T 3q6k_A 298 QVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGG 336 (381)
T ss_dssp EEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSC
T ss_pred eEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCe
Confidence 999999876 21 1 111111223466777776665
No 363
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=80.46 E-value=7.2 Score=36.68 Aligned_cols=38 Identities=16% Similarity=0.136 Sum_probs=30.6
Q ss_pred cceEEEEeeCCCe-eecC-CCeEEEEEcCCcceeeeecee
Q psy6213 6 PVHKHGLKADNGL-AQPS-RNVFKIFLIKDTEFVETHNLR 43 (330)
Q Consensus 6 ~v~~~~~s~~~~~-~~~g-d~~i~iw~~~~~~~~~~~~~~ 43 (330)
.+.+++..++..+ ++.+ |+++|+|++.++++.....+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~ 276 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIELS 276 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEECC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeeccc
Confidence 4677777888888 6777 999999999999988766543
No 364
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=78.20 E-value=40 Score=30.63 Aligned_cols=105 Identities=11% Similarity=0.056 Sum_probs=57.0
Q ss_pred ceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEeccc-------ccceeEEEEEecCCCEEEEEecC------
Q psy6213 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDH-------KRTVNKVSFHYVESNWLISGSQD------ 119 (330)
Q Consensus 53 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~-------~~~i~~i~~~~~~~~~l~~~~~d------ 119 (330)
.|..++++|.+.+.++++...+.|...+-. ++....+..+ ...|.+|++.|.+.+.++.+...
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~----G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~ 99 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPS----TETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWL 99 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETT----TTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSS
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCC----CCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccc
Confidence 368999999666777777766665554422 2222222221 24588999998665555555421
Q ss_pred -CcEEEEEeec-Cceeeeeec-C--------CCCeEEEEEcCCCCcEEEEEec
Q psy6213 120 -GTMRLFDIRC-QESTKIFHS-N--------TESVRDVEFNPHSPYAFASVSE 161 (330)
Q Consensus 120 -~~i~i~d~~~-~~~~~~~~~-~--------~~~v~~~~~~~~~~~~~~~~~~ 161 (330)
+...+|--.. ++.-..+.. . ...+..++++|..+..++.+..
T Consensus 100 ~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 100 PNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp CCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred cCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 1244554432 222111111 0 1124678999876555666663
No 365
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=77.70 E-value=25 Score=27.98 Aligned_cols=228 Identities=8% Similarity=0.045 Sum_probs=123.8
Q ss_pred CCcEEEEEcCCCcEEEEECCCCCC------CceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeec-------
Q psy6213 63 EENHIATGATNGAVVVWNLGQISR------SKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC------- 129 (330)
Q Consensus 63 ~~~~l~~~~~dg~i~iw~~~~~~~------~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~------- 129 (330)
+...+++.+.+|.|+--.+..... +.....+... +.+..+.... ....++..+..|.++-+....
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~-D~l~~~~~~~-~~~~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDG-DEIVIALCVN-THDYLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTT-CCEEEEEEEE-TTCEEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCC-CEEEEEEEEC-CCCEEEEEECCCeEEEEEHHHCCCCCcc
Confidence 667888999999999887654211 1111122333 3344444443 566788888899888776532
Q ss_pred --Cce---eeeeecCCCCeEEEEEcC---CCCcEEEEEecCCcEEEEecCCC------ccceeeeccCCCCeEEEEEcCC
Q psy6213 130 --QES---TKIFHSNTESVRDVEFNP---HSPYAFASVSENGTIQQWDVRRP------EKCFYQFTAHSGPIFACDWHPE 195 (330)
Q Consensus 130 --~~~---~~~~~~~~~~v~~~~~~~---~~~~~~~~~~~dg~i~i~d~~~~------~~~~~~~~~~~~~i~~~~~~~~ 195 (330)
|.+ ...+. ....|..+...+ ++. .++..+..|.++...+..- +.....+.. .+.+..+....+
T Consensus 85 ~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~-~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~ 161 (312)
T 1suu_A 85 SKGQNISELINLG-DQEEILTIKNSKDLTDDA-YLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFK 161 (312)
T ss_dssp ---CBGGGTSCCC-TTCCEEEEEEESCCCTTC-EEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECT
T ss_pred CCCcChhhccCCC-CCCEEEEEEEeccCCCCC-EEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCC
Confidence 111 11122 234455554333 344 4677789999998877431 122223333 455666655555
Q ss_pred CCEEEEEecCCcEEEEeCCCCccc--------cceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCc----
Q psy6213 196 HAWLATASRDKTIKVWDLSIKPSL--------EYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYI---- 263 (330)
Q Consensus 196 ~~~l~~~~~dg~i~i~d~~~~~~~--------~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~---- 263 (330)
+..++..+.+|.+..+....-+.. .........+..+..-+++..+++.+ ..|.....++..-..
T Consensus 162 ~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt---~~G~~kr~~~~e~~~~~R~ 238 (312)
T 1suu_A 162 DEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVS---ENGYGKRLNMSKISELKRG 238 (312)
T ss_dssp TCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEE---TTSEEEEEEGGGSCBCCTT
T ss_pred CCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEE---CCCceEEEEHHHhcccCCC
Confidence 667888899999999887542111 11122345566665555555555554 489999888753211
Q ss_pred --cceEee---cCCCCeEEEEEecCCCEEEEeecCCeEee
Q psy6213 264 --PLASFT---EHKDVVSGLAWRGDPQLFIASSRVSIIPR 298 (330)
Q Consensus 264 --~~~~~~---~~~~~v~~~~~~~~~~~l~s~~~dg~i~i 298 (330)
-+..+. .....+.++..-.+...+...+..|.+.-
T Consensus 239 ~kGv~~~~~~k~~~~~lv~~~~~~~~~~l~~~t~~g~~~r 278 (312)
T 1suu_A 239 ATGYTSYKKSDKKAGSVVDAIAVSEDDEILLVSKRSKALR 278 (312)
T ss_dssp CCCEECSCTTCTTTCSEEEEEEECTTCEEEEEETTCEEEE
T ss_pred CCCEEeeEccCCCCCeEEEEEEeCCCCEEEEEeCCCeEEE
Confidence 011111 22234544433334445555666775433
No 366
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=75.21 E-value=27 Score=27.17 Aligned_cols=197 Identities=7% Similarity=0.003 Sum_probs=109.0
Q ss_pred cceeEEEEEecCCCEEEEEecCCcEEEEE---eecCceeeeeecCCCCeEEEEEcC--CCCcEEEEEecCCcEEEEecCC
Q psy6213 98 RTVNKVSFHYVESNWLISGSQDGTMRLFD---IRCQESTKIFHSNTESVRDVEFNP--HSPYAFASVSENGTIQQWDVRR 172 (330)
Q Consensus 98 ~~i~~i~~~~~~~~~l~~~~~d~~i~i~d---~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~~~~dg~i~i~d~~~ 172 (330)
+.+..+.-.. ....|+..+..|.++--. +........+. ....|..+.. + +.+ .++..+.+|.++...+..
T Consensus 24 D~~~~~~~~~-t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~-~~v~~T~~G~iKr~~l~~ 99 (276)
T 3no0_A 24 APVVNILRVP-FTEGLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGN-RLLLATKKGYVKKIPLAE 99 (276)
T ss_dssp CCEEEEEEEE-TTSCEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCS-EEEEEETTSEEEEEEGGG
T ss_pred CeEEEEEEEC-CCCEEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCC-EEEEEeCCCEEEEEEHHH
Confidence 3444444443 455566667778776543 32221111133 3456666644 4 344 588899999999988754
Q ss_pred C-----ccceeeeccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCccc--------cceeccccceEEEEEcCCCC
Q psy6213 173 P-----EKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSL--------EYSINTIASVSRIKWRPQRK 239 (330)
Q Consensus 173 ~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~--------~~~~~~~~~v~~~~~~~~~~ 239 (330)
- +.....++. .+.+..+........++..+..|.+..++...-+.. .........+..+...+++.
T Consensus 100 ~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~ 178 (276)
T 3no0_A 100 FEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKNDETSGLRIWNGEP 178 (276)
T ss_dssp TTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSCS
T ss_pred hhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCC
Confidence 2 111122332 345555555555667888899999888876433221 11122345566665555555
Q ss_pred eEEEEeecccCCeEEEEEccCCCc------cceEeecCCCCeEEEEEecCCCEEEEeecCCeEee--eeccc
Q psy6213 240 FHLASCSLVVDSSVNVWDIRRPYI------PLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPR--AKNIK 303 (330)
Q Consensus 240 ~l~~~~~~~~~~~i~i~d~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~i--w~~~~ 303 (330)
+++... ..|.++...+..-.. -+..+ ...+.+..+....+...++..+.+|.+.. +...+
T Consensus 179 ~ll~~T---~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 179 YLLVIT---AKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEEEEE---TTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGGG
T ss_pred EEEEEe---CCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHHH
Confidence 655555 488888887743211 12222 22345555544444456777788888777 65443
No 367
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=72.76 E-value=14 Score=32.43 Aligned_cols=61 Identities=10% Similarity=0.037 Sum_probs=40.9
Q ss_pred CeEEEEEcCCCCEEEEEecC------------CcEEEEeCCCCccccce-eccccceEEEEEcCCCCeEEEEee
Q psy6213 186 PIFACDWHPEHAWLATASRD------------KTIKVWDLSIKPSLEYS-INTIASVSRIKWRPQRKFHLASCS 246 (330)
Q Consensus 186 ~i~~~~~~~~~~~l~~~~~d------------g~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~ 246 (330)
..-.|+|+|.|.+++.-..+ ..+.+.+..+++..... .+....++.++|+||++.|++...
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEEE
Confidence 34678999999966654432 23555565555433222 234678999999999999887765
No 368
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=72.40 E-value=39 Score=27.77 Aligned_cols=166 Identities=9% Similarity=0.144 Sum_probs=93.0
Q ss_pred cEEEEEeecC--ceeeeeecC------CCCeEEEEEc---CC----CCcEEEEEecCCcEEEEecCCCccceeeec----
Q psy6213 121 TMRLFDIRCQ--ESTKIFHSN------TESVRDVEFN---PH----SPYAFASVSENGTIQQWDVRRPEKCFYQFT---- 181 (330)
Q Consensus 121 ~i~i~d~~~~--~~~~~~~~~------~~~v~~~~~~---~~----~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~---- 181 (330)
+|.+||+++. +.++.+.-. ...+..+++. |. +.+..++=...+.|.++|+.++. ..+...
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~-swRv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQD-SWNVTHPTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTE-EEEEECGGGS
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCc-EEEEccCCCc
Confidence 5888999988 887776532 3457788887 22 33333443446779999998732 222110
Q ss_pred ----------cC----CCCeEEEEEcCC----CCEEEEEecCCcEEEEeCC-----CCc--cccceeccc---cceEEEE
Q psy6213 182 ----------AH----SGPIFACDWHPE----HAWLATASRDKTIKVWDLS-----IKP--SLEYSINTI---ASVSRIK 233 (330)
Q Consensus 182 ----------~~----~~~i~~~~~~~~----~~~l~~~~~dg~i~i~d~~-----~~~--~~~~~~~~~---~~v~~~~ 233 (330)
+. ...+..|+++|+ ++.|.-....+ -++|.+. ... ......+.. ..-..++
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALA 281 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEE
Confidence 10 246888999997 67777666544 2344332 211 111112222 2334566
Q ss_pred Ec-CCCCeEEEEeecccCCeEEEEEccC-CC--ccceEee--cCCCCeEEEEEecCCCEEEEee
Q psy6213 234 WR-PQRKFHLASCSLVVDSSVNVWDIRR-PY--IPLASFT--EHKDVVSGLAWRGDPQLFIASS 291 (330)
Q Consensus 234 ~~-~~~~~l~~~~~~~~~~~i~i~d~~~-~~--~~~~~~~--~~~~~v~~~~~~~~~~~l~s~~ 291 (330)
+. .+|. ++.+-- ..+.|..|+..+ .- .....+. ..-..+.++.+.++|.+-+.++
T Consensus 282 ~D~~~G~-ly~~~~--~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 282 YDPKTKV-IFFAEA--NTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp ECTTTCE-EEEEES--SSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred EeCCCCe-EEEEec--cCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 75 5665 455554 589999999876 22 1122221 1123467777777776555543
No 369
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=72.14 E-value=24 Score=30.81 Aligned_cols=64 Identities=9% Similarity=0.065 Sum_probs=41.7
Q ss_pred cceEEEEEcCCCCeEEEEeec---------ccCCeEEEEEccCCCccceEeecC-CCCeEEEEEecCCCEEEEee
Q psy6213 227 ASVSRIKWRPQRKFHLASCSL---------VVDSSVNVWDIRRPYIPLASFTEH-KDVVSGLAWRGDPQLFIASS 291 (330)
Q Consensus 227 ~~v~~~~~~~~~~~l~~~~~~---------~~~~~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~~ 291 (330)
.....|.|+++|...+.+-.. ...+.+..++..+++. ...+... ...++.++|+||++.|+.+-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel-~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeE-EEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 457889999999854434320 0022667777666654 3333332 35789999999999888764
No 370
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=68.28 E-value=40 Score=26.20 Aligned_cols=186 Identities=10% Similarity=0.020 Sum_probs=103.3
Q ss_pred CCcEEEEEcCCCcEEEEEC---CCCCCCceeEEecccccceeEEEEEec-CCCEEEEEecCCcEEEEEeecCc------e
Q psy6213 63 EENHIATGATNGAVVVWNL---GQISRSKQERVFNDHKRTVNKVSFHYV-ESNWLISGSQDGTMRLFDIRCQE------S 132 (330)
Q Consensus 63 ~~~~l~~~~~dg~i~iw~~---~~~~~~~~~~~~~~~~~~i~~i~~~~~-~~~~l~~~~~d~~i~i~d~~~~~------~ 132 (330)
+.+.|+.-+..|.++--.. .... ...+ +. ....|..+.. +. +...++..+.+|.++-..+..-. .
T Consensus 34 t~~~ll~fT~~G~v~~~~~~~lp~~~-~~~l--l~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~ 108 (276)
T 3no0_A 34 FTEGLFLVSNRGRVYWIAGSQALQGS-KVSL--KS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMP 108 (276)
T ss_dssp TTSCEEEEETTSEEEEECSHHHHTSE-ECCC--SS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEE
T ss_pred CCCEEEEEcCCCeEEEEEhhhCccCc-cccc--CC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeE
Confidence 4555666667787665433 2211 1111 32 3455666543 32 46789999999999999876532 1
Q ss_pred eeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCC--------ccceeeeccCCCCeEEEEEcCCCCEEEEEec
Q psy6213 133 TKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRP--------EKCFYQFTAHSGPIFACDWHPEHAWLATASR 204 (330)
Q Consensus 133 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 204 (330)
...++ ..+.+..+....... .++..+..|.+..+....- +.....+.. ...|..+...+++..++..+.
T Consensus 109 ~i~lk-egD~l~~~~~~~~~~-~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~~~ll~~T~ 185 (276)
T 3no0_A 109 IIKLT-EGDEVVSIASSVDET-HILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWNGEPYLLVITA 185 (276)
T ss_dssp CSCCC-TTCCEEEEEECCSSC-EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESSCSEEEEEET
T ss_pred EEecC-CCCEEEEEEEeCCCC-EEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCCCEEEEEeC
Confidence 12233 234566665555555 4777788899888875421 111112322 345666655556678889999
Q ss_pred CCcEEEEeCCCCccc-------cceeccccceEEEEEcCCCCeEEEEeecccCCeEEE--EEccC
Q psy6213 205 DKTIKVWDLSIKPSL-------EYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNV--WDIRR 260 (330)
Q Consensus 205 dg~i~i~d~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i--~d~~~ 260 (330)
.|.++...+...+.. ... .....+..+....+...+++... +|.+.. ++...
T Consensus 186 ~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~---~G~~ir~~~~~~~ 246 (276)
T 3no0_A 186 KGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTK---NGKAFYDKINQKD 246 (276)
T ss_dssp TSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEET---TSCEEEEEEEGGG
T ss_pred CCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcC---CCeEEEeeeCHHH
Confidence 999999887543221 111 22344444433333333444443 777776 77643
No 371
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=68.18 E-value=30 Score=30.26 Aligned_cols=62 Identities=8% Similarity=0.066 Sum_probs=42.0
Q ss_pred CCeEEEEEcCCCCEEEEEec------------CCcEEEEeCCCCcccccee-ccccceEEEEEcCCCCeEEEEee
Q psy6213 185 GPIFACDWHPEHAWLATASR------------DKTIKVWDLSIKPSLEYSI-NTIASVSRIKWRPQRKFHLASCS 246 (330)
Q Consensus 185 ~~i~~~~~~~~~~~l~~~~~------------dg~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~ 246 (330)
.....|.|.++|.+.+.... ...+..++..+++...... .....++.++|+||++.|++...
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 35678999999987764322 1246666666664333222 23467999999999999888876
No 372
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=66.79 E-value=12 Score=36.14 Aligned_cols=38 Identities=18% Similarity=0.251 Sum_probs=30.3
Q ss_pred ceeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeee
Q psy6213 99 TVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFH 137 (330)
Q Consensus 99 ~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 137 (330)
.+.+++..+ +..++++-+.|+++++|++.+++++.+..
T Consensus 239 ~~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 344555554 77899999999999999999998877654
No 373
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=66.21 E-value=34 Score=30.09 Aligned_cols=62 Identities=10% Similarity=0.065 Sum_probs=40.0
Q ss_pred ceEEEEEcCCCCeEEEEeecc---------cCCeEEEEEccCCCccceEeecC-CCCeEEEEEecCCCEEEEe
Q psy6213 228 SVSRIKWRPQRKFHLASCSLV---------VDSSVNVWDIRRPYIPLASFTEH-KDVVSGLAWRGDPQLFIAS 290 (330)
Q Consensus 228 ~v~~~~~~~~~~~l~~~~~~~---------~~~~i~i~d~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~l~s~ 290 (330)
..-.|+|+|.|..++..-+.. .++.+.+.+..+++. ...+..+ ...++.++|+||++.|+..
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~-~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeE-EEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 467899999998544433200 013456666666654 3334443 4689999999999988775
No 374
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=65.63 E-value=51 Score=26.42 Aligned_cols=149 Identities=9% Similarity=0.061 Sum_probs=87.8
Q ss_pred CCcEEEEEcCCCcEEEEECCCCCC----CceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEee--cCc-----
Q psy6213 63 EENHIATGATNGAVVVWNLGQISR----SKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR--CQE----- 131 (330)
Q Consensus 63 ~~~~l~~~~~dg~i~iw~~~~~~~----~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~--~~~----- 131 (330)
+...++.++.+|.++--.+..... +.....+.. .+.+..+.... ....++..+..|.+..+... .-.
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~-~~d~ill~T~~G~~~rf~~~~~eip~~gr~ 185 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCS-AGDDLLLVSANGQSIRFSATDEALRPMGRA 185 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEEC-TTCEEEEEETTSEEEEEECCTTTSCCCCTT
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEec-CCCEEEEEECCCeEEEEECcccccCcCCcC
Confidence 467899999999999988765211 112222333 34455555543 56678888889999888776 211
Q ss_pred ----eeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCC------cccee--eeccCCCCeEEEEEcCCCCEE
Q psy6213 132 ----STKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRP------EKCFY--QFTAHSGPIFACDWHPEHAWL 199 (330)
Q Consensus 132 ----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~------~~~~~--~~~~~~~~i~~~~~~~~~~~l 199 (330)
....+. ....|.++...+.+. .++..+..|.++.-.+..- +.-+. .+....+.+..+....+...+
T Consensus 186 a~Gv~~i~L~-~~d~Vv~~~~~~~~~-~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i 263 (327)
T 3uc1_A 186 TSGVQGMRFN-IDDRLLSLNVVREGT-YLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSEL 263 (327)
T ss_dssp SBCEESSCCC-TTCCEEEEEECCTTC-EEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEE
T ss_pred CCCeeeecCC-CCCEEEEEEEECCCC-EEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccE
Confidence 111222 345577776665555 4778889999988876431 11111 222213345554444445567
Q ss_pred EEEecCCcEEEEeCCC
Q psy6213 200 ATASRDKTIKVWDLSI 215 (330)
Q Consensus 200 ~~~~~dg~i~i~d~~~ 215 (330)
+..+.+|.+.-++...
T Consensus 264 ~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 264 YAVTSGGGVIRTAARQ 279 (327)
T ss_dssp EEEEGGGCEEEEEGGG
T ss_pred EEEcCCCeEEEEehhh
Confidence 7777778877777654
No 375
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=61.22 E-value=96 Score=28.09 Aligned_cols=235 Identities=9% Similarity=0.020 Sum_probs=116.7
Q ss_pred eeee-ecccCCcEEEEE-cCC----CcEEEEECCCCCCCceeE-Eec-cccc------ceeEEEEEecCCCEEEEE----
Q psy6213 55 NDVA-WSCIEENHIATG-ATN----GAVVVWNLGQISRSKQER-VFN-DHKR------TVNKVSFHYVESNWLISG---- 116 (330)
Q Consensus 55 ~~~~-~~~~~~~~l~~~-~~d----g~i~iw~~~~~~~~~~~~-~~~-~~~~------~i~~i~~~~~~~~~l~~~---- 116 (330)
..+. ++| ++++++.+ +.. ..++++|+.+ .+.+. .+. .-+. ....++|.. ++..+++.
T Consensus 132 ~g~~~~~~-~~~~~~~~ls~~G~d~~~~~~~d~~t---~~~~~~~~~~~~k~~~~~~~~~~~~~W~d-~~~~~~~~~~~~ 206 (711)
T 4hvt_A 132 RGVSNCFQ-NPNRYLISMSFGGKDEMFFREWDLEK---KDFVKNGFEPITNSGKLLEGKFTYPTWIN-KDTIIFNLVLHK 206 (711)
T ss_dssp EEEEECSS-STTEEEEEEEETTCSEEEEEEEETTT---TEECTTCSCCBCTTCCBCCEETCCEEEEE-TTEEEECCCCST
T ss_pred eceeecCC-CCCEEEEEeCCCCCceeEEEEEECCc---CCcCCCCcccccccccccccccceeeEEC-CCEEEEEeCCCC
Confidence 4555 888 77766654 333 3599999988 33332 111 0001 123458873 44444432
Q ss_pred ------ecCCcEEEEEeecCc--eeeeeecCCCCe-EEEEEcCCCCc----EEEEEecC---CcEEEEecCCCccceeee
Q psy6213 117 ------SQDGTMRLFDIRCQE--STKIFHSNTESV-RDVEFNPHSPY----AFASVSEN---GTIQQWDVRRPEKCFYQF 180 (330)
Q Consensus 117 ------~~d~~i~i~d~~~~~--~~~~~~~~~~~v-~~~~~~~~~~~----~~~~~~~d---g~i~i~d~~~~~~~~~~~ 180 (330)
+....|+.|.+-+.. -...+......+ .....++++.+ ++++.+.+ ..+++.|...+......+
T Consensus 207 ~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l 286 (711)
T 4hvt_A 207 NEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKI 286 (711)
T ss_dssp TCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEEC
T ss_pred CCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEe
Confidence 112468888775542 233454433333 34556677764 35544322 346666765422222333
Q ss_pred ccCCCCeEEEEEcCCCCEEEEE----------ecCCcEEEEeCCCCc-------cccc--eeccccceEEEEEcCCCCeE
Q psy6213 181 TAHSGPIFACDWHPEHAWLATA----------SRDKTIKVWDLSIKP-------SLEY--SINTIASVSRIKWRPQRKFH 241 (330)
Q Consensus 181 ~~~~~~i~~~~~~~~~~~l~~~----------~~dg~i~i~d~~~~~-------~~~~--~~~~~~~v~~~~~~~~~~~l 241 (330)
...... .+..+.++.+++.. ...+.|...|+.+.. .... .......+..+.+..+. +
T Consensus 287 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--l 362 (711)
T 4hvt_A 287 NMPSDA--TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKDR--V 362 (711)
T ss_dssp CSCTTC--EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSSC--E
T ss_pred ecCCcc--eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECCE--E
Confidence 222221 12334455555532 246779999987642 1111 12234567888888763 5
Q ss_pred EEEeecccCC--eEEEEEccCCCccceE-eecC-CCCeEEEEEecCCC-EEEEeecC---CeEeeee
Q psy6213 242 LASCSLVVDS--SVNVWDIRRPYIPLAS-FTEH-KDVVSGLAWRGDPQ-LFIASSRV---SIIPRAK 300 (330)
Q Consensus 242 ~~~~~~~~~~--~i~i~d~~~~~~~~~~-~~~~-~~~v~~~~~~~~~~-~l~s~~~d---g~i~iw~ 300 (330)
+++.. .++ .+.++++.++...... +... .+.+.....++++. ++++.+.. +.+..++
T Consensus 363 ~~~~~--~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d 427 (711)
T 4hvt_A 363 FLATY--DNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWV 427 (711)
T ss_dssp EEEEE--ETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEEC
T ss_pred EEEEE--ECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEe
Confidence 55555 355 5777777655311222 2211 24566666666654 34433322 3455444
No 376
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=60.64 E-value=30 Score=33.39 Aligned_cols=35 Identities=9% Similarity=0.016 Sum_probs=27.3
Q ss_pred eeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEE
Q psy6213 54 CNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERV 92 (330)
Q Consensus 54 v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 92 (330)
+.+++..+ +..++++-+.|+++++|++.+ ++++.+
T Consensus 240 ~vs~~~~~-~~~~lftL~~D~~LRiWsl~t---~~~v~t 274 (1139)
T 4fhn_B 240 IISMIFLS-TYNVLVMLSLDYKLKVLDLST---NQCVET 274 (1139)
T ss_dssp BSCCEEET-TTTEEEEEBTTCEEEEEETTT---TEEEEE
T ss_pred eEEeeccC-CccEEEEEeCCCEEEEEECCC---CCeEEe
Confidence 34555666 778999999999999999988 555554
No 377
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=59.65 E-value=64 Score=25.58 Aligned_cols=187 Identities=9% Similarity=0.049 Sum_probs=105.7
Q ss_pred CCCEEEEEecCCcEEEEEeecCceee---------eeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCC---C---
Q psy6213 109 ESNWLISGSQDGTMRLFDIRCQESTK---------IFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR---P--- 173 (330)
Q Consensus 109 ~~~~l~~~~~d~~i~i~d~~~~~~~~---------~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~---~--- 173 (330)
+...+++.+.+|.|+-..+..-+... .++ ..+.+..+....... .++..+..|.++-+.... .
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lk-e~D~l~~~~~~~~~~-~ll~~T~~G~~~~~~~~~ip~~~r~ 84 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLN-DGDEIVIALCVNTHD-YLFMISNEGKLYLINAYEIKDSSRA 84 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEEETTC-EEEEEETTSEEEEEEGGGSCC----
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccC-CCCEEEEEEEECCCC-EEEEEECCCeEEEEEHHHCCCCCcc
Confidence 56778899999999988765432211 122 234455554444455 366677888877776532 1
Q ss_pred --ccc---eeeeccCCCCeEEEEEcC---CCCEEEEEecCCcEEEEeCCCCcc------ccceeccccceEEEEEcCCCC
Q psy6213 174 --EKC---FYQFTAHSGPIFACDWHP---EHAWLATASRDKTIKVWDLSIKPS------LEYSINTIASVSRIKWRPQRK 239 (330)
Q Consensus 174 --~~~---~~~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~~~~~~v~~~~~~~~~~ 239 (330)
+.+ ...+.. ...|..+...+ +..+++..+.+|.++...+..... ..........+..+.......
T Consensus 85 ~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 85 SKGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTSAEIVFKDE 163 (312)
T ss_dssp ---CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEEEEEECTTC
T ss_pred CCCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEEEEEeCCCC
Confidence 111 111222 23454443332 466788889999999988754421 111122344555555544445
Q ss_pred eEEEEeecccCCeEEEEEccCCCc--------cceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 240 FHLASCSLVVDSSVNVWDIRRPYI--------PLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 240 ~l~~~~~~~~~~~i~i~d~~~~~~--------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
.+++.. .+|.+..++...-.. ....+.. ...|.++..-+++..|++.+..|........
T Consensus 164 ~i~l~T---~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 164 KVICLS---KKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EEEEEE---TTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred EEEEEe---CCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 555555 489998888754211 0111222 3456666655566678888999988877543
No 378
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=52.60 E-value=23 Score=31.88 Aligned_cols=30 Identities=13% Similarity=0.306 Sum_probs=26.3
Q ss_pred CCCEEEEEecCCcEEEEEeecCceeeeeec
Q psy6213 109 ESNWLISGSQDGTMRLFDIRCQESTKIFHS 138 (330)
Q Consensus 109 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 138 (330)
+..++++-+.|.++|+|++++++++.+..-
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 578999999999999999999988777654
No 379
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=50.25 E-value=92 Score=24.58 Aligned_cols=233 Identities=10% Similarity=0.063 Sum_probs=123.5
Q ss_pred CCcEEEEEcCCCcEEEEECCCCCC------CceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeec-------
Q psy6213 63 EENHIATGATNGAVVVWNLGQISR------SKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC------- 129 (330)
Q Consensus 63 ~~~~l~~~~~dg~i~iw~~~~~~~------~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~------- 129 (330)
+...+++.+.+|.|+--.+..... +.....++.. +.+..+.... ..+.++..+..|.++-+....
T Consensus 2 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~-D~l~~~~~~~-~~~~ll~fT~~G~~~~~~~~elp~~~~~ 79 (307)
T 1zi0_A 2 QEDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEE-DFIDRLLVAN-THDHILCFSSRGRVYSMKVYQLPEATRG 79 (307)
T ss_dssp CCEEEEEEETTSEEEEEECC---------------------CCEEEEEEEE-TTCEEEEEETTSEEEEEEGGGSCCCCSS
T ss_pred CCcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCC-CEEEEEEEEC-CCCEEEEEECCCEEEEEEhhHCcCCCCC
Confidence 567788899999998777654211 1111112222 3333443333 566777778888877665421
Q ss_pred --Cceee---eeecCCCCeEEEEEc---CCCCcEEEEEecCCcEEEEecCCC------ccceeeeccCCCCeEEEEEcCC
Q psy6213 130 --QESTK---IFHSNTESVRDVEFN---PHSPYAFASVSENGTIQQWDVRRP------EKCFYQFTAHSGPIFACDWHPE 195 (330)
Q Consensus 130 --~~~~~---~~~~~~~~v~~~~~~---~~~~~~~~~~~~dg~i~i~d~~~~------~~~~~~~~~~~~~i~~~~~~~~ 195 (330)
|.++. .+. ....|..+..- ++++ .++..+.+|.++.-.+..- +.....+..+ +.+..+....+
T Consensus 80 a~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~-~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~ 156 (307)
T 1zi0_A 80 ARGRPIVNLLPLE-QDERITAILPVTEFEEGV-KVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSG 156 (307)
T ss_dssp SCCEEGGGTSCCC-TTCCEEEEEEESCCCTTC-EEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECT
T ss_pred CCCeEhhhccCCC-CCCEEEEEEEeccCCCCc-EEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCC
Confidence 22211 122 33456655432 2344 4778899999999876421 1111223333 55555555445
Q ss_pred CCEEEEEecCCcEEEEeCCCCccc--------cceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCc----
Q psy6213 196 HAWLATASRDKTIKVWDLSIKPSL--------EYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYI---- 263 (330)
Q Consensus 196 ~~~l~~~~~dg~i~i~d~~~~~~~--------~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~---- 263 (330)
...++..+.+|.+..++...-+.. .........|..+...+++..++... ..|..+-.++..-..
T Consensus 157 ~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T---~~G~~Kr~~~~e~~~~~Rg 233 (307)
T 1zi0_A 157 EDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDGAILTAT---QNGYGKRTAVAEYPTKSRA 233 (307)
T ss_dssp TCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSCEEEEEE---TTSEEEEECGGGSCCCCTT
T ss_pred CCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCCEEEEEE---cCCceEEEEHHHhccCCCC
Confidence 567888888899888876433221 11122345666666555555545554 488888887742210
Q ss_pred ----cceEeecCCCCeEEEEEecCCCEEEEeecCCeEeeeeccc
Q psy6213 264 ----PLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIK 303 (330)
Q Consensus 264 ----~~~~~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 303 (330)
....+..-.+.+-.+....+...++..+.+|.+.......
T Consensus 234 ~kG~~~~~~~~~~~~lv~~~~v~~~~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 234 TKGVISIKVTERNGLVVGAVQVDDCDQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp SCCEESSCCCTTTCSEEEEEEECTTCEEEEEESSCCEEEEEGGG
T ss_pred CCCEEeeEecCCCCeEEEEEEeCCCceEEEEcCCCcEEEEeccc
Confidence 0111222234555554444445566677777766655443
No 380
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=49.82 E-value=1.1e+02 Score=25.25 Aligned_cols=187 Identities=11% Similarity=0.088 Sum_probs=95.9
Q ss_pred ceeEEEEEecCCCEEEEEecCCcEEEEEeecCce-----------eeeeec-CCCCeEEEEEcCCCCcEEEEEecCCcEE
Q psy6213 99 TVNKVSFHYVESNWLISGSQDGTMRLFDIRCQES-----------TKIFHS-NTESVRDVEFNPHSPYAFASVSENGTIQ 166 (330)
Q Consensus 99 ~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~-----------~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~dg~i~ 166 (330)
.|..++. .....+.-..+|.|+.|-.+..-+ ...+.. ....|..++.... ..++-..+|.|+
T Consensus 122 ~i~~ia~---G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~G~~---hs~alt~~G~v~ 195 (406)
T 4d9s_A 122 RIKQIAC---GDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAAGAE---HTAAVTEDGDLY 195 (406)
T ss_dssp CEEEEEE---CSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEECSS---EEEEEETTSCEE
T ss_pred CEEEEEE---ChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCCcEEEEecCCC---eEEEEeCCCCEE
Confidence 4655553 456666667899999997543211 111111 1235666654332 355557889999
Q ss_pred EEecCCCccc----------eeeec-cCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcccc----------ceec-
Q psy6213 167 QWDVRRPEKC----------FYQFT-AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE----------YSIN- 224 (330)
Q Consensus 167 i~d~~~~~~~----------~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~----------~~~~- 224 (330)
.|-....++. ...+. .....|..++.. ....+.-..+|.|+.|-.....++- ....
T Consensus 196 ~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G--~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~ 273 (406)
T 4d9s_A 196 GWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG--WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEA 273 (406)
T ss_dssp EEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEEC--SSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGG
T ss_pred EeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEEC--CCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecc
Confidence 9965432211 01111 112345555543 3445556788999999754331110 0000
Q ss_pred -cccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCc-----------cceEeecCCCCeEEEEEecCCCEEEEeec
Q psy6213 225 -TIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYI-----------PLASFTEHKDVVSGLAWRGDPQLFIASSR 292 (330)
Q Consensus 225 -~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 292 (330)
....|..++--.. +.++.. .+|.|+.|=.....+ |..........|..++.- ....++-..
T Consensus 274 ~~~~~v~~i~~G~~--hs~alt---~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va~G--~~hs~alt~ 346 (406)
T 4d9s_A 274 LSNSFISQISGGWR--HTMALT---SDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCG--WRHTLAVTE 346 (406)
T ss_dssp GTTSCEEEEEECSS--EEEEEE---TTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEEEEC--SSEEEEEET
T ss_pred cCCCCEEEEEecCC--EEEEEc---CCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEEEeC--CCeEEEEeC
Confidence 1223555554333 334444 489999996543211 111111122356666653 344555678
Q ss_pred CCeEeeee
Q psy6213 293 VSIIPRAK 300 (330)
Q Consensus 293 dg~i~iw~ 300 (330)
||.|+.|-
T Consensus 347 ~G~v~~wG 354 (406)
T 4d9s_A 347 RNNVFAWG 354 (406)
T ss_dssp TSCEEEEE
T ss_pred CCCEEEec
Confidence 89999995
No 381
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=47.78 E-value=1.2e+02 Score=25.05 Aligned_cols=223 Identities=9% Similarity=0.049 Sum_probs=109.1
Q ss_pred CCcEEEEEcCCCcEEEEECCCCCCC--------ceeEEecc-cccceeEEEEEecCCCEEEEEecC-CcEEEEEeecCce
Q psy6213 63 EENHIATGATNGAVVVWNLGQISRS--------KQERVFND-HKRTVNKVSFHYVESNWLISGSQD-GTMRLFDIRCQES 132 (330)
Q Consensus 63 ~~~~l~~~~~dg~i~iw~~~~~~~~--------~~~~~~~~-~~~~i~~i~~~~~~~~~l~~~~~d-~~i~i~d~~~~~~ 132 (330)
.....++-..||.|..|-.....+. .....+.. ....|..++. .....+.-..+ +.|+.|-....-.
T Consensus 24 G~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~---G~~ht~al~~~gg~v~~wG~n~~Gq 100 (406)
T 4d9s_A 24 GASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTC---GADHTVAYSQSGMEVYSWGWGDFGR 100 (406)
T ss_dssp CSSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEE---CSSEEEEEETTTTEEEEEECCGGGT
T ss_pred CCCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEe---CcceEEEEECCCCEEEEEcCCCCcC
Confidence 4455555667888988875442110 01111111 1235666654 33444444444 5899996432111
Q ss_pred -----------eeeee-cCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccc----------eeeecc-CCCCeEE
Q psy6213 133 -----------TKIFH-SNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC----------FYQFTA-HSGPIFA 189 (330)
Q Consensus 133 -----------~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~----------~~~~~~-~~~~i~~ 189 (330)
...+. .....|..++.-. . ..++-..+|.|+.|-....++. ...+.. ....|..
T Consensus 101 LG~g~~~~~~~p~~v~~l~~~~i~~ia~G~--~-h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~ 177 (406)
T 4d9s_A 101 LGHGNSSDLFTPLPIKALHGIRIKQIACGD--S-HCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKM 177 (406)
T ss_dssp TCSSSCCCEEEEEECGGGTTCCEEEEEECS--S-EEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEE
T ss_pred CCCCCCCccccceEecccCCCCEEEEEECh--h-heEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCCcEEE
Confidence 01111 1223566666533 2 3555678999999976542221 111111 1224666
Q ss_pred EEEcCCCCEEEEEecCCcEEEEeCCCCcccc------c----ee--ccccceEEEEEcCCCCeEEEEeecccCCeEEEEE
Q psy6213 190 CDWHPEHAWLATASRDKTIKVWDLSIKPSLE------Y----SI--NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWD 257 (330)
Q Consensus 190 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~------~----~~--~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d 257 (330)
++.. ....+.-..+|.++.|-.....++- . .. .....+..++.... +.++.. .+|.|+.|=
T Consensus 178 va~G--~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G~~--ht~~l~---~~G~v~~wG 250 (406)
T 4d9s_A 178 VAAG--AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACGWR--HTISVS---YSGALYTYG 250 (406)
T ss_dssp EEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEECSS--EEEEEE---TTCCEEEEE
T ss_pred EecC--CCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEECCC--cEEEEc---CCCCEEEee
Confidence 6554 3455666789999999754321110 0 00 01234555554333 223333 488999986
Q ss_pred ccCCCcc----------ceEee-cCCCCeEEEEEecCCCEEEEeecCCeEeeee
Q psy6213 258 IRRPYIP----------LASFT-EHKDVVSGLAWRGDPQLFIASSRVSIIPRAK 300 (330)
Q Consensus 258 ~~~~~~~----------~~~~~-~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~ 300 (330)
.....+. ...+. .....|..++.. ....+.-..||.|+.|-
T Consensus 251 ~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G--~~hs~alt~~G~v~~wG 302 (406)
T 4d9s_A 251 WSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGG--WRHTMALTSDGKLYGWG 302 (406)
T ss_dssp CCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEE
T ss_pred CCCCCCCCCCCCcCccccEEecccCCCCEEEEEec--CCEEEEEcCCCeEEEee
Confidence 5432110 01111 112346666543 34455567888898885
No 382
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=43.83 E-value=1.2e+02 Score=27.40 Aligned_cols=28 Identities=14% Similarity=0.248 Sum_probs=22.7
Q ss_pred CCcEEEEEcCCCcEEEEECCCCCCCceeEEe
Q psy6213 63 EENHIATGATNGAVVVWNLGQISRSKQERVF 93 (330)
Q Consensus 63 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 93 (330)
+..++++-+.|+++|+|++.+ .+++...
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t---~~lv~t~ 257 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTS---FTLIQDY 257 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTT---TEEEEEE
T ss_pred CCcEEEEEEcCCeEEEEEcCC---CceEEee
Confidence 577999999999999999998 5544443
No 383
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=37.33 E-value=1.3e+02 Score=25.81 Aligned_cols=68 Identities=12% Similarity=0.055 Sum_probs=41.4
Q ss_pred eEEEEEcCC----CC-cEEEEEecCCcEEEEecCCCc-------cceeeec--cCCCCeEEEEEcCCCCEEEEEecCCcE
Q psy6213 143 VRDVEFNPH----SP-YAFASVSENGTIQQWDVRRPE-------KCFYQFT--AHSGPIFACDWHPEHAWLATASRDKTI 208 (330)
Q Consensus 143 v~~~~~~~~----~~-~~~~~~~~dg~i~i~d~~~~~-------~~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i 208 (330)
.++++...- +. .++..|+.+|.|.-.-+.... ..+..+. ....+|..+.++++..+|.+++.++.+
T Consensus 406 lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V~ 485 (495)
T 1q47_A 406 FTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVA 485 (495)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCEE
T ss_pred eEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeEE
Confidence 456555432 32 256678888987544332111 1222222 235789999999999999999988766
Q ss_pred EE
Q psy6213 209 KV 210 (330)
Q Consensus 209 ~i 210 (330)
+|
T Consensus 486 ~v 487 (495)
T 1q47_A 486 QL 487 (495)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 384
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=34.88 E-value=1.5e+02 Score=22.61 Aligned_cols=144 Identities=12% Similarity=-0.045 Sum_probs=76.3
Q ss_pred CEEEEEecCCcEEEEEeecCce-eeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCC------Ccccee---ee
Q psy6213 111 NWLISGSQDGTMRLFDIRCQES-TKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR------PEKCFY---QF 180 (330)
Q Consensus 111 ~~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~------~~~~~~---~~ 180 (330)
...++.+.+|.|+--....... ...++ ..+.+..+......++ ++..+..|.++-+.... .+.++. .+
T Consensus 3 ~v~v~lT~~G~iKr~~~~~~~~~~~~lk-e~D~l~~~~~~~t~~~-ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L 80 (256)
T 1zvt_A 3 PVTIVLSQMGWVRSAKGHDIDAPGLNYK-AGDSFKAAVKGKSNQP-VVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTL 80 (256)
T ss_dssp EEEEEEETTSEEEEEESSCCCSTTSCCC-TTCCEEEEEEEETTSC-EEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCC
T ss_pred CEEEEEeCCCEEEEeeCCcCCceeccCC-CCCEEEEEEEeCCCCE-EEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecC
Confidence 3456677788877655432111 11233 2334544444444443 55567788877665432 122111 12
Q ss_pred ccCCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcc------ccceeccccceEEEEEc-CCCCeEEEEeecccCCeE
Q psy6213 181 TAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPS------LEYSINTIASVSRIKWR-PQRKFHLASCSLVVDSSV 253 (330)
Q Consensus 181 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~~~~~~v~~~~~~-~~~~~l~~~~~~~~~~~i 253 (330)
. ....|.++....++.+|+.++..|.++...+..... ..........+..+... .++..+++.. .+|.+
T Consensus 81 ~-~~e~Iv~~~~~~~~~~lll~T~~G~~Kr~~~~e~~~~~r~G~~~i~L~~~d~lv~~~~~~~~~~~i~l~T---~~G~~ 156 (256)
T 1zvt_A 81 P-PGATVDHMLMESDDQKLLMASDAGYGFVCTFNDLVARNRAGKALITLPENAHVMPPVVIEDASDMLLAIT---QAGRM 156 (256)
T ss_dssp C-TTCCEEEEECCCTTCEEEEEBTTSEEEEEEGGGGCCCSTTCEECBCCCTTCCBCCCEECCCTTCEEEEEE---TTSEE
T ss_pred C-CCCEEEEEEEeCCCCEEEEEeCCCeEEEeEHHHhcccCcCceEEEEECCCCEEEEEEEecCCCCEEEEEc---CCCeE
Confidence 2 234566664434567788899999999998754311 11111223344444444 2344455555 48998
Q ss_pred EEEEccC
Q psy6213 254 NVWDIRR 260 (330)
Q Consensus 254 ~i~d~~~ 260 (330)
..++...
T Consensus 157 lrf~~~e 163 (256)
T 1zvt_A 157 LMFPVSD 163 (256)
T ss_dssp EEEEGGG
T ss_pred EEEEHHH
Confidence 8888753
No 385
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=33.68 E-value=1.8e+02 Score=23.19 Aligned_cols=232 Identities=9% Similarity=0.043 Sum_probs=126.4
Q ss_pred CCcEEEEEcCCCcEEEEECCCCC------CCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEe---ec----
Q psy6213 63 EENHIATGATNGAVVVWNLGQIS------RSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDI---RC---- 129 (330)
Q Consensus 63 ~~~~l~~~~~dg~i~iw~~~~~~------~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~---~~---- 129 (330)
....+++.+.+|.|+--.+.... .+.....++ ....+..+.... ....++.-+..|.++-... ..
T Consensus 2 ~E~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~k-e~D~~~~~~~~~-t~d~ll~fT~~Gr~y~~~~~~lp~~~r~ 79 (327)
T 3uc1_A 2 AEDVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLK-QDDIVAHFFVCS-THDLILFFTTQGRVYRAKAYDLPEASRT 79 (327)
T ss_dssp CCEEEEEEETTSEEEEEEHHHHHHHC--------CCCC-GGGCEEEEEEEE-TTSEEEEEETTSEEEEEEGGGSCBCCSS
T ss_pred CccEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccC-CCCEEEEEEEeC-CCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence 35677888889988876543210 011111122 223444444443 5667777777887776543 21
Q ss_pred --Cceeee---eecCCCCeEEEEEcC---CCCcEEEEEecCCcEEEEecCCCc------cceeeeccCCCCeEEEEEcCC
Q psy6213 130 --QESTKI---FHSNTESVRDVEFNP---HSPYAFASVSENGTIQQWDVRRPE------KCFYQFTAHSGPIFACDWHPE 195 (330)
Q Consensus 130 --~~~~~~---~~~~~~~v~~~~~~~---~~~~~~~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~i~~~~~~~~ 195 (330)
|.++.. +. ....|..+..-+ +.. .++..+.+|.++.-.+..-. .....++. .+.+..+.....
T Consensus 80 ~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~e~-~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~ 156 (327)
T 3uc1_A 80 ARGQHVANLLAFQ-PEERIAQVIQIRGYTDAP-YLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSA 156 (327)
T ss_dssp SCCEEHHHHTTCC-TTCCEEEEEEESSTTSSS-EEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECT
T ss_pred CCCEEHHHccCCC-CCCEEEEEEEeccCCCCC-EEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecC
Confidence 222111 22 234565554333 344 68899999999998765411 11122333 345555555555
Q ss_pred CCEEEEEecCCcEEEEeCC--CCccc--------cceeccccceEEEEEcCCCCeEEEEeecccCCeEEEEEccCCCc--
Q psy6213 196 HAWLATASRDKTIKVWDLS--IKPSL--------EYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYI-- 263 (330)
Q Consensus 196 ~~~l~~~~~dg~i~i~d~~--~~~~~--------~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~i~i~d~~~~~~-- 263 (330)
...++..+..|.+..+... .-+.. .........|..+...+.+.+++... ..|.++.-.+..-..
T Consensus 157 ~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T---~~G~~Krt~l~e~~~~~ 233 (327)
T 3uc1_A 157 GDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVAT---SGGYAKRTAIEEYPVQG 233 (327)
T ss_dssp TCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEE---TTSEEEEEEGGGSCBCC
T ss_pred CCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEe---CCCcEEEEEHHHccccC
Confidence 6678888889998888776 32211 11122345677766666666655555 489988887643221
Q ss_pred ----cceE--eecCCCCeEEEEEecCCCEEEEeecCCeEeeeecc
Q psy6213 264 ----PLAS--FTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNI 302 (330)
Q Consensus 264 ----~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~dg~i~iw~~~ 302 (330)
-+.. +..-.+.+..+....+...++..+.+|.+..+...
T Consensus 234 R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 234 RGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp TTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred cCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 0111 21213345555544455567777888887776543
No 386
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=29.50 E-value=3.3e+02 Score=24.84 Aligned_cols=158 Identities=8% Similarity=-0.124 Sum_probs=72.2
Q ss_pred cccceEEEEeeCCCe-ee-cC-CCeEEEEEcCCcceeeeeceee-----ccccccccceeeeeecccCCcEEEEEcCC--
Q psy6213 4 LSPVHKHGLKADNGL-AQ-PS-RNVFKIFLIKDTEFVETHNLRV-----GKNINLNFSCNDVAWSCIEENHIATGATN-- 73 (330)
Q Consensus 4 ~~~v~~~~~s~~~~~-~~-~g-d~~i~iw~~~~~~~~~~~~~~~-----~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-- 73 (330)
.+.|.+++++|.+.. +. +. .|.|...+ +.++--....... .....-...+.++++.|.+.+.++++..+
T Consensus 20 ~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~ 98 (763)
T 3a0f_A 20 GGFISGLVAHPTEKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYV 98 (763)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCT
T ss_pred CCceeEEEeCCCCCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccc
Confidence 468999999998743 33 33 55443332 2233222221100 00000113468899988555555554321
Q ss_pred ---CcEEEEECCC-CCCCceeEEeccc----ccc--eeEEEEEecCCCEEEEEecCCcEEEEEeecCceeeeeec-----
Q psy6213 74 ---GAVVVWNLGQ-ISRSKQERVFNDH----KRT--VNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHS----- 138 (330)
Q Consensus 74 ---g~i~iw~~~~-~~~~~~~~~~~~~----~~~--i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~----- 138 (330)
....||.... ....+....-... ... ...++++|.+...+..+...+.|.. ..+.++.=..+..
T Consensus 99 ~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~~-S~DgG~TW~~~~~~~~~~ 177 (763)
T 3a0f_A 99 QWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLWR-STDRAQTWSRMNQLPDSS 177 (763)
T ss_dssp TTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEEE-ESSTTSSCEECTTSCCCS
T ss_pred cCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEEE-ECCCCcCccccccCcccC
Confidence 1234444333 2223332210000 111 1468888866666666665543331 2222222111111
Q ss_pred -CCCCeEEEEEcCCCCcEEEEEecCC
Q psy6213 139 -NTESVRDVEFNPHSPYAFASVSENG 163 (330)
Q Consensus 139 -~~~~v~~~~~~~~~~~~~~~~~~dg 163 (330)
....+..++++|.++..++.+..++
T Consensus 178 ~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 178 TYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp CTTTCEEEEEECSSSTTCEEEEESST
T ss_pred CCccceEEEEECCCCCCEEEEEEeCC
Confidence 1134778899887543455555554
No 387
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=29.05 E-value=2.3e+02 Score=23.01 Aligned_cols=194 Identities=12% Similarity=0.147 Sum_probs=100.8
Q ss_pred eeeeecccCCcEEEEEcCCCcEEEEECCCCCC--------CceeEEeccc-ccceeEEEEEecCCCEEEEEecCCcEEEE
Q psy6213 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISR--------SKQERVFNDH-KRTVNKVSFHYVESNWLISGSQDGTMRLF 125 (330)
Q Consensus 55 ~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~--------~~~~~~~~~~-~~~i~~i~~~~~~~~~l~~~~~d~~i~i~ 125 (330)
..++.+. .....+.-..||.|..|-.....+ ......+... ...|..++. .....+.-..+|.|+.|
T Consensus 108 ~~v~i~~-G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~---G~~hs~alt~~G~v~~w 183 (389)
T 3kci_A 108 KKVAVNS-GGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA---GGAHSACVTAAGDLYTW 183 (389)
T ss_dssp EEEEECT-TCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE---CSSEEEEEETTSCEEEE
T ss_pred eEEEECc-CCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEe---CcCeEEEEeCCCeEEEe
Confidence 4455665 666777778899999997543111 0011111111 124555553 45666667789999999
Q ss_pred EeecCce-----------eeeee-cCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccc----------eeeecc-
Q psy6213 126 DIRCQES-----------TKIFH-SNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC----------FYQFTA- 182 (330)
Q Consensus 126 d~~~~~~-----------~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~----------~~~~~~- 182 (330)
-....-. ...+. .....|..++...... ..+.-..+|.|+.|-....++. ...+..
T Consensus 184 G~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~-~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~ 262 (389)
T 3kci_A 184 GKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDA-QTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL 262 (389)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSC-EEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGG
T ss_pred CCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCc-EEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEeccc
Confidence 7543111 11111 1234566666544233 3556678899999965432211 111111
Q ss_pred CCCCeEEEEEcCCCCEEEEEecCCcEEEEeCCCCcccc----------cee--ccccceEEEEEcCCCCeEEEEeecccC
Q psy6213 183 HSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE----------YSI--NTIASVSRIKWRPQRKFHLASCSLVVD 250 (330)
Q Consensus 183 ~~~~i~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~----------~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~~ 250 (330)
....|..++.. ....+.-..||.|..|-.....++- ... .....|..++.... ..++.. .+
T Consensus 263 ~~~~v~~v~~G--~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~~--h~~al~---~~ 335 (389)
T 3kci_A 263 TGLGVVKVECG--SQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSL--HCVCCT---ED 335 (389)
T ss_dssp TTSCEEEEEEE--TTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSS--EEEEEE---TT
T ss_pred CCCcEEEEeCC--CCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEEEeccC--eEEEEC---CC
Confidence 12245566554 3344555788999999764321110 000 01234555554333 234444 48
Q ss_pred CeEEEEEccC
Q psy6213 251 SSVNVWDIRR 260 (330)
Q Consensus 251 ~~i~i~d~~~ 260 (330)
|.|+.|=...
T Consensus 336 G~v~~wG~n~ 345 (389)
T 3kci_A 336 GEVYTWGDND 345 (389)
T ss_dssp CCEEEEECCT
T ss_pred CCEEEeeCCC
Confidence 9999997654
No 388
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=26.38 E-value=3.7e+02 Score=24.47 Aligned_cols=148 Identities=13% Similarity=0.109 Sum_probs=73.1
Q ss_pred ceeeeeecccCCcEEEEEcCCCcEEEEECCCCCCCceeEEecc------------cccceeEEEEEecCCCEEEEEecC-
Q psy6213 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFND------------HKRTVNKVSFHYVESNWLISGSQD- 119 (330)
Q Consensus 53 ~v~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~------------~~~~i~~i~~~~~~~~~l~~~~~d- 119 (330)
.|.+++++|.+.+.++++...|.|...+ .. ++....+.. ....+.++++.|.+.+.++.+..+
T Consensus 22 ~i~~i~~~p~~~~~~y~~~~~ggv~~S~--Dg--G~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~ 97 (763)
T 3a0f_A 22 FISGLVAHPTEKDLIYARTDIGGTYRWN--AA--KWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDY 97 (763)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEE--TT--TTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSC
T ss_pred ceeEEEeCCCCCCEEEEEeccCcEEEEC--CC--CCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEeccc
Confidence 4789999996667787777666554332 21 222222111 124588999988555555544321
Q ss_pred ----CcEEEEEee-cCceeeeeecC-------CC--CeEEEEEcCCCCcEEEEEecCCcEEEEecCCCccceeeecc---
Q psy6213 120 ----GTMRLFDIR-CQESTKIFHSN-------TE--SVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA--- 182 (330)
Q Consensus 120 ----~~i~i~d~~-~~~~~~~~~~~-------~~--~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~--- 182 (330)
....||--. .++.=..+... .. ....++++|..+..+.++...+.| |-....++.-.....
T Consensus 98 ~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l--~~S~DgG~TW~~~~~~~~ 175 (763)
T 3a0f_A 98 VQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGL--WRSTDRAQTWSRMNQLPD 175 (763)
T ss_dssp TTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCE--EEESSTTSSCEECTTSCC
T ss_pred ccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcE--EEECCCCcCccccccCcc
Confidence 123344332 23321111110 11 114688888754456666554433 333332332222211
Q ss_pred ---CCCCeEEEEEcCCC-CEEEEEecCC
Q psy6213 183 ---HSGPIFACDWHPEH-AWLATASRDK 206 (330)
Q Consensus 183 ---~~~~i~~~~~~~~~-~~l~~~~~dg 206 (330)
....+..+.++|.. ..++.+..++
T Consensus 176 ~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 176 SSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp CSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred cCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 11347788998843 4455555554
No 389
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=24.54 E-value=1.4e+02 Score=26.00 Aligned_cols=68 Identities=12% Similarity=0.173 Sum_probs=40.7
Q ss_pred eEEEEEcCCCC-cEEEEEecCCcEEEEecCCCcc---ceeee--ccCCCCeE-EEEEcCCCCEEEEEecCCcEEE
Q psy6213 143 VRDVEFNPHSP-YAFASVSENGTIQQWDVRRPEK---CFYQF--TAHSGPIF-ACDWHPEHAWLATASRDKTIKV 210 (330)
Q Consensus 143 v~~~~~~~~~~-~~~~~~~~dg~i~i~d~~~~~~---~~~~~--~~~~~~i~-~~~~~~~~~~l~~~~~dg~i~i 210 (330)
.++++....+. .++..|+.+|.|.-..+..... ....+ .....+|. .+.+++++.+|++++.++.++|
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 44444443332 2566788889876555543211 12222 22346775 8999999999999988765554
No 390
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=24.45 E-value=2.7e+02 Score=22.15 Aligned_cols=186 Identities=8% Similarity=0.083 Sum_probs=101.1
Q ss_pred CCCEEEEEecCCcEEEEEeecCc----eeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEecC---CC-----ccc
Q psy6213 109 ESNWLISGSQDGTMRLFDIRCQE----STKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR---RP-----EKC 176 (330)
Q Consensus 109 ~~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~---~~-----~~~ 176 (330)
+...+++.+.+|.|+--.+...+ ....++ ..+.+..+........ ++..+..|.++-+... .. +.+
T Consensus 4 ~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lk-e~D~l~~~~~~~t~d~-ll~fT~~Gr~~~~~~~elp~~~r~a~G~~ 81 (323)
T 1wp5_A 4 SEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMK-DTDRLLAMLEMNTKDV-LLLFTNKGNYLYCPVHELPDIRWKDLGQH 81 (323)
T ss_dssp CCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCC-TTCCEEEEEEEETTSE-EEEEETTSEEEEEEGGGSCBCCTTSCCEE
T ss_pred CCcEEEEEeCCCEEEEeEHHHhhhcCccccccC-CCCEEEEEEEECCCCE-EEEEECCCEEEEEEHHHCcCCCCCCCCcC
Confidence 56778899999999987654221 111233 2344555544444553 5666778887666442 21 111
Q ss_pred ee---eeccCCCCeEEE-EEcC--CCCEEEEEecCCcEEEEeCCCCcccc-------ceeccccceEEEEEcCCCCeEEE
Q psy6213 177 FY---QFTAHSGPIFAC-DWHP--EHAWLATASRDKTIKVWDLSIKPSLE-------YSINTIASVSRIKWRPQRKFHLA 243 (330)
Q Consensus 177 ~~---~~~~~~~~i~~~-~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~-------~~~~~~~~v~~~~~~~~~~~l~~ 243 (330)
+. .+. ....|.++ ...+ ++.+++..+.+|.++-..+....... ........+..+........+++
T Consensus 82 i~~~i~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~~~~~~i~l 160 (323)
T 1wp5_A 82 IANIIPID-RDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLTDGMNELFL 160 (323)
T ss_dssp GGGTSCCC-TTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEECSCSEEEE
T ss_pred hhhccCCC-CCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEeCCCCEEEE
Confidence 11 122 22345554 3332 25678999999999998875332211 11222345555555444455555
Q ss_pred EeecccCCeEEEEEccCCCc------cceEee-cCCCCeEEEEEecCCC-EEEEeecCCeEeeee
Q psy6213 244 SCSLVVDSSVNVWDIRRPYI------PLASFT-EHKDVVSGLAWRGDPQ-LFIASSRVSIIPRAK 300 (330)
Q Consensus 244 ~~~~~~~~~i~i~d~~~~~~------~~~~~~-~~~~~v~~~~~~~~~~-~l~s~~~dg~i~iw~ 300 (330)
... +|.+..++...-.. -+..+. .....|.++..-+++. .|+..+..|..+.-.
T Consensus 161 ~T~---~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~ 222 (323)
T 1wp5_A 161 VTH---NGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMK 222 (323)
T ss_dssp EET---TSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEE
T ss_pred EeC---CCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEE
Confidence 554 89888888753211 011111 1234566665544444 788888888866644
No 391
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=23.59 E-value=3e+02 Score=22.43 Aligned_cols=148 Identities=9% Similarity=0.063 Sum_probs=86.3
Q ss_pred CCcEEEEEcCCCcEEEEECCCC------CCCceeEEecccccceeEEEEEecCCCEEEEEecCCcEEEEEeec-------
Q psy6213 63 EENHIATGATNGAVVVWNLGQI------SRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC------- 129 (330)
Q Consensus 63 ~~~~l~~~~~dg~i~iw~~~~~------~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d~~i~i~d~~~------- 129 (330)
+...+++.+.+|.|+--.+... .++.....++. ...+..+.... ....++..+..|.++-+....
T Consensus 6 ~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke-~D~l~~~~~~~-t~d~ll~fT~~G~~~~~~~~eip~~~r~ 83 (370)
T 3l6v_A 6 PEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKE-EDFIDQLWLVN-THDTLLTFTSSGKVFWLPVHQLPEAGSN 83 (370)
T ss_dssp CCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSC-CCCEEEEEEEC-TTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred CCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCC-CCEEEEEEEec-CCCEEEEEeCCCeEEEEEHHHCcCCCcc
Confidence 7788999999999997655321 11222233333 34555555553 567777778888887665421
Q ss_pred --Cceeee---eecCCCCeEEEEEcC---CCCcEEEEEecCCcEEEEecCCC------ccceeeeccCCCCeEEEEEcCC
Q psy6213 130 --QESTKI---FHSNTESVRDVEFNP---HSPYAFASVSENGTIQQWDVRRP------EKCFYQFTAHSGPIFACDWHPE 195 (330)
Q Consensus 130 --~~~~~~---~~~~~~~v~~~~~~~---~~~~~~~~~~~dg~i~i~d~~~~------~~~~~~~~~~~~~i~~~~~~~~ 195 (330)
|.++.. +. ....|.++...+ .+. .++.++..|.++...+..- +.....+.. .+.+..+.....
T Consensus 84 a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~-~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~ 160 (370)
T 3l6v_A 84 ARGRPIINWIPLE-SGERVQAVLPVREYADNR-YVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDG 160 (370)
T ss_dssp SCCEEGGGSCCCC-TTCCEEEEEEESCCCTTC-EEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECS
T ss_pred cCCcCHhhccCCC-CCCEEEEEEEeccCCCCc-EEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCC
Confidence 222111 22 334566554432 233 5888899999998876531 111222332 344555555455
Q ss_pred CCEEEEEecCCcEEEEeCCC
Q psy6213 196 HAWLATASRDKTIKVWDLSI 215 (330)
Q Consensus 196 ~~~l~~~~~dg~i~i~d~~~ 215 (330)
...++..+.+|.+..++...
T Consensus 161 ~~~i~l~T~~G~~irf~~~~ 180 (370)
T 3l6v_A 161 DRDVLLFASNGKTVRFGEST 180 (370)
T ss_dssp CCEEEEEETTSEEEEEEGGG
T ss_pred CceEEEEeCCCeEEEEEccc
Confidence 56788888889988887643
No 392
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=23.00 E-value=3.1e+02 Score=22.36 Aligned_cols=145 Identities=10% Similarity=0.059 Sum_probs=82.2
Q ss_pred CCCEEEEEecCCcEEEEEeecCc---------eeeeeecCCCCeEEEEEcCCCCcEEEEEecCCcEEEEec---CCC---
Q psy6213 109 ESNWLISGSQDGTMRLFDIRCQE---------STKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDV---RRP--- 173 (330)
Q Consensus 109 ~~~~l~~~~~d~~i~i~d~~~~~---------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~---~~~--- 173 (330)
+...+++.+.+|.|+--.+...+ ....++ ....+..+.......+ ++..+..|.++.+.. ...
T Consensus 6 ~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lk-e~D~l~~~~~~~t~d~-ll~fT~~G~~~~~~~~eip~~~r~ 83 (370)
T 3l6v_A 6 PEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTK-EEDFIDQLWLVNTHDT-LLTFTSSGKVFWLPVHQLPEAGSN 83 (370)
T ss_dssp CCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECS-CCCCEEEEEEECTTCE-EEEEETTSEEEEEEGGGSCBCCTT
T ss_pred CCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceecccC-CCCEEEEEEEecCCCE-EEEEeCCCeEEEEEHHHCcCCCcc
Confidence 67789999999999987654321 112233 3445666655555554 555667787766643 221
Q ss_pred --cccee---eeccCCCCeEEEEEcC---CCCEEEEEecCCcEEEEeCCCCcc------ccceeccccceEEEEEcCCCC
Q psy6213 174 --EKCFY---QFTAHSGPIFACDWHP---EHAWLATASRDKTIKVWDLSIKPS------LEYSINTIASVSRIKWRPQRK 239 (330)
Q Consensus 174 --~~~~~---~~~~~~~~i~~~~~~~---~~~~l~~~~~dg~i~i~d~~~~~~------~~~~~~~~~~v~~~~~~~~~~ 239 (330)
+.++. .+. ....|.++..-+ ++.+|+.++..|.++...+..... ..........+..+.......
T Consensus 84 a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv~v~~~~~~~ 162 (370)
T 3l6v_A 84 ARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALVGVALTDGDR 162 (370)
T ss_dssp SCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEEEEEEECSCC
T ss_pred cCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEEEEEEeCCCc
Confidence 11111 122 234555554332 456899999999999988654321 111122234455555444444
Q ss_pred eEEEEeecccCCeEEEEEcc
Q psy6213 240 FHLASCSLVVDSSVNVWDIR 259 (330)
Q Consensus 240 ~l~~~~~~~~~~~i~i~d~~ 259 (330)
.+++... .|.+..++..
T Consensus 163 ~i~l~T~---~G~~irf~~~ 179 (370)
T 3l6v_A 163 DVLLFAS---NGKTVRFGES 179 (370)
T ss_dssp EEEEEET---TSEEEEEEGG
T ss_pred eEEEEeC---CCeEEEEEcc
Confidence 5555554 8888888764
No 393
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=22.60 E-value=78 Score=22.79 Aligned_cols=37 Identities=19% Similarity=0.093 Sum_probs=25.9
Q ss_pred CcccceEEEEeeCCCe-eecC--CCeEEEEEcCCcceeee
Q psy6213 3 YLSPVHKHGLKADNGL-AQPS--RNVFKIFLIKDTEFVET 39 (330)
Q Consensus 3 H~~~v~~~~~s~~~~~-~~~g--d~~i~iw~~~~~~~~~~ 39 (330)
+.+-+.++.|...+.. +++. ++++.++|.+-|++...
T Consensus 117 g~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF~v~ 156 (188)
T 1ukf_A 117 GRKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEFQSS 156 (188)
T ss_dssp TCEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEEEEEE
T ss_pred CCceEEEEEecCCCceeEEeccCCCeEEEeCCCCceeecc
Confidence 3445666777765555 5555 89999999998886543
No 394
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=22.43 E-value=2.8e+02 Score=24.42 Aligned_cols=57 Identities=14% Similarity=0.110 Sum_probs=36.9
Q ss_pred cEEEEEecCCcEEEEecCCCc----c-ceeeec--cCCCCeEEEEEcCCCCEEEEEecCCcEEE
Q psy6213 154 YAFASVSENGTIQQWDVRRPE----K-CFYQFT--AHSGPIFACDWHPEHAWLATASRDKTIKV 210 (330)
Q Consensus 154 ~~~~~~~~dg~i~i~d~~~~~----~-~~~~~~--~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 210 (330)
.++..|+.+|.|.-.-..... . .+..+. ....+|..+.++++...|..++.++.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 367778889987644332212 1 111222 24568899999999999999888776665
No 395
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=21.40 E-value=2.8e+02 Score=24.91 Aligned_cols=56 Identities=13% Similarity=0.081 Sum_probs=35.9
Q ss_pred EEEEEecCCcEE-EEecCCCc------cceeee--ccCCCCeEEEEEcCCCCEEEEEecCCcEEE
Q psy6213 155 AFASVSENGTIQ-QWDVRRPE------KCFYQF--TAHSGPIFACDWHPEHAWLATASRDKTIKV 210 (330)
Q Consensus 155 ~~~~~~~dg~i~-i~d~~~~~------~~~~~~--~~~~~~i~~~~~~~~~~~l~~~~~dg~i~i 210 (330)
++..|+.+|.|. +....... ..+..+ .....+|..|.++++...|.+++.++.+++
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 566788889875 33222111 011111 235668999999999999999998876665
No 396
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=20.55 E-value=1.1e+02 Score=21.96 Aligned_cols=34 Identities=15% Similarity=0.165 Sum_probs=25.4
Q ss_pred CCCeEEEEEcCCCCcEEEEEecCCcEEEEecCCC
Q psy6213 140 TESVRDVEFNPHSPYAFASVSENGTIQQWDVRRP 173 (330)
Q Consensus 140 ~~~v~~~~~~~~~~~~~~~~~~dg~i~i~d~~~~ 173 (330)
..-+.++.|...+.+.+++...+|++.+||.+-+
T Consensus 118 ~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~G 151 (188)
T 1ukf_A 118 RKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLG 151 (188)
T ss_dssp CEEEEEEEETTTEEEEEEEEEETTEEEEEETTTE
T ss_pred CceEEEEEecCCCceeEEeccCCCeEEEeCCCCc
Confidence 3445667777666667777788999999998863
No 397
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=20.27 E-value=4.1e+02 Score=22.74 Aligned_cols=68 Identities=10% Similarity=-0.007 Sum_probs=41.0
Q ss_pred eEEEEEcC----CCC-eEEEEeecccCCeEEEEEcc-CC------CccceEeec--CCCCeEEEEEecCCCEEEEeecCC
Q psy6213 229 VSRIKWRP----QRK-FHLASCSLVVDSSVNVWDIR-RP------YIPLASFTE--HKDVVSGLAWRGDPQLFIASSRVS 294 (330)
Q Consensus 229 v~~~~~~~----~~~-~l~~~~~~~~~~~i~i~d~~-~~------~~~~~~~~~--~~~~v~~~~~~~~~~~l~s~~~dg 294 (330)
.++++... ++. .++..++ .+|.|.-.-+. .. ...+..+.. ...+|..|.++++...|..++.++
T Consensus 406 lT~IaVd~v~~~~~~~tV~flGT--~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~ 483 (495)
T 1q47_A 406 FTQIVVDRVDAEDGQYDVMFIGT--DVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAG 483 (495)
T ss_dssp EEEEEEEEEECSSCEEEEEEEEE--TTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSC
T ss_pred eEEEEEEEEccCCCcEEEEEEeC--CCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCe
Confidence 46665542 233 3444555 57776544332 21 112333432 357899999999999999999988
Q ss_pred eEee
Q psy6213 295 IIPR 298 (330)
Q Consensus 295 ~i~i 298 (330)
.++|
T Consensus 484 V~~v 487 (495)
T 1q47_A 484 VAQL 487 (495)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7765
Done!