Your job contains 1 sequence.
>psy6213
MAYLSPVHKHGLKADNGLAQPSRNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWS
CIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDG
TMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQF
TAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKF
HLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAK
NIKIFIASSRVSIIPRAENIKIFITSSRVL
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6213
(330 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0027518 - symbol:CG7609 species:7227 "Drosophila m... 857 1.1e-85 1
ZFIN|ZDB-GENE-040426-2012 - symbol:wdr24 "WD repeat domai... 839 9.1e-84 1
UNIPROTKB|F1MJS7 - symbol:WDR24 "Uncharacterized protein"... 833 3.9e-83 1
UNIPROTKB|F1RG37 - symbol:WDR24 "Uncharacterized protein"... 832 5.0e-83 1
MGI|MGI:2446285 - symbol:Wdr24 "WD repeat domain 24" spec... 832 5.0e-83 1
UNIPROTKB|G3V8L0 - symbol:Wdr24 "RCG32838" species:10116 ... 832 5.0e-83 1
UNIPROTKB|Q96S15 - symbol:WDR24 "WD repeat-containing pro... 491 2.3e-79 2
UNIPROTKB|I3LF05 - symbol:WDR24 "Uncharacterized protein"... 492 2.4e-79 2
UNIPROTKB|Q5ZMV9 - symbol:WDR24 "WD repeat-containing pro... 710 4.3e-70 1
DICTYBASE|DDB_G0287817 - symbol:wdr24 "WD40 repeat-contai... 666 7.1e-65 1
UNIPROTKB|F1PFU7 - symbol:WDR24 "Uncharacterized protein"... 492 6.1e-47 1
POMBASE|SPAC4F8.11 - symbol:SPAC4F8.11 "WD repeat protein... 425 5.5e-39 1
ASPGD|ASPL0000074357 - symbol:AN4518 species:162425 "Emer... 335 5.8e-29 1
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 299 1.5e-26 1
TAIR|locus:2029939 - symbol:PEX7 "AT1G29260" species:3702... 256 5.5e-22 1
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 254 9.0e-22 1
UNIPROTKB|O00628 - symbol:PEX7 "Peroxisomal targeting sig... 245 8.0e-21 1
UNIPROTKB|E2QYX6 - symbol:PEX7 "Uncharacterized protein" ... 244 1.0e-20 1
UNIPROTKB|Q08DL6 - symbol:PEX7 "Peroxisomal biogenesis fa... 241 2.1e-20 1
RGD|1308483 - symbol:Pex7 "peroxisomal biogenesis factor ... 239 3.5e-20 1
UNIPROTKB|F1S687 - symbol:PEX7 "Uncharacterized protein" ... 237 5.7e-20 1
MGI|MGI:1321392 - symbol:Pex7 "peroxisomal biogenesis fac... 234 1.2e-19 1
UNIPROTKB|Q8R537 - symbol:PEX7 "Peroxisomal targeting sig... 229 1.6e-18 1
TAIR|locus:2202129 - symbol:AT1G11160 "AT1G11160" species... 233 4.5e-17 1
ZFIN|ZDB-GENE-040426-1954 - symbol:katnb1 "katanin p80 (W... 231 4.5e-17 1
CGD|CAL0000852 - symbol:orf19.7629 species:5476 "Candida ... 232 4.7e-17 2
UNIPROTKB|Q5ACL4 - symbol:RTC1 "Restriction of telomere c... 232 4.7e-17 2
UNIPROTKB|Q5ZIU8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 228 1.1e-16 1
UNIPROTKB|Q8NBT0 - symbol:POC1A "POC1 centriolar protein ... 222 2.0e-16 1
UNIPROTKB|F6UQ08 - symbol:F6UQ08 "Uncharacterized protein... 217 2.2e-15 1
UNIPROTKB|H3BPK1 - symbol:KATNB1 "Katanin p80 WD40 repeat... 196 2.4e-15 1
UNIPROTKB|F1SIZ2 - symbol:POC1A "Uncharacterized protein"... 212 2.5e-15 1
UNIPROTKB|E2QTQ5 - symbol:KATNB1 "Uncharacterized protein... 217 2.8e-15 1
UNIPROTKB|Q9BVA0 - symbol:KATNB1 "Katanin p80 WD40 repeat... 217 2.8e-15 1
RGD|1311256 - symbol:Katnb1 "katanin p80 (WD repeat conta... 217 2.8e-15 1
MGI|MGI:1921437 - symbol:Katnb1 "katanin p80 (WD40-contai... 217 2.8e-15 1
UNIPROTKB|A6QQU1 - symbol:KATNB1 "KATNB1 protein" species... 217 2.9e-15 1
MGI|MGI:1917485 - symbol:Poc1a "POC1 centriolar protein h... 212 3.7e-15 1
RGD|1565004 - symbol:Poc1a "POC1 centriolar protein homol... 206 7.2e-15 1
UNIPROTKB|H3BPD8 - symbol:KATNB1 "Katanin p80 WD40 repeat... 191 9.0e-15 1
TAIR|locus:2150788 - symbol:AT5G08390 "AT5G08390" species... 214 9.9e-15 1
UNIPROTKB|E1BQV9 - symbol:KATNB1 "Katanin p80 WD40 repeat... 212 1.2e-14 1
UNIPROTKB|I3L2U8 - symbol:PAFAH1B1 "Platelet-activating f... 205 1.5e-14 1
UNIPROTKB|Q2TBP4 - symbol:POC1A "POC1 centriolar protein ... 207 1.6e-14 1
SGD|S000006072 - symbol:PRP46 "Member of the NineTeen Com... 208 1.6e-14 1
TAIR|locus:2060560 - symbol:LIS "AT2G41500" species:3702 ... 209 2.0e-14 1
UNIPROTKB|E2RGD1 - symbol:POC1A "Uncharacterized protein"... 206 2.1e-14 1
DICTYBASE|DDB_G0295793 - symbol:DDB_G0295793 "WD40 repeat... 210 2.1e-14 1
POMBASE|SPAC29A4.18 - symbol:prw1 "Clr6 histone deacetyla... 206 2.5e-14 1
UNIPROTKB|A5D7P3 - symbol:PAFAH1B1 "Platelet-activating f... 205 2.9e-14 1
UNIPROTKB|E2QY31 - symbol:PAFAH1B1 "Uncharacterized prote... 205 2.9e-14 1
UNIPROTKB|J9P388 - symbol:PAFAH1B1 "Uncharacterized prote... 205 2.9e-14 1
UNIPROTKB|P43034 - symbol:PAFAH1B1 "Platelet-activating f... 205 2.9e-14 1
UNIPROTKB|F2Z521 - symbol:PAFAH1B1 "Platelet-activating f... 205 2.9e-14 1
MGI|MGI:109520 - symbol:Pafah1b1 "platelet-activating fac... 205 2.9e-14 1
RGD|620331 - symbol:Pafah1b1 "platelet-activating factor ... 205 2.9e-14 1
UNIPROTKB|P63004 - symbol:Pafah1b1 "Platelet-activating f... 205 2.9e-14 1
POMBASE|SPCC1672.10 - symbol:mis16 "kinetochore protein M... 205 3.3e-14 1
UNIPROTKB|P43033 - symbol:PAFAH1B1 "Platelet-activating f... 204 3.8e-14 1
FB|FBgn0046222 - symbol:CG1109 species:7227 "Drosophila m... 209 3.8e-14 1
ZFIN|ZDB-GENE-040426-1993 - symbol:poc1a "POC1 centriolar... 204 3.9e-14 1
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 203 4.2e-14 1
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 203 5.1e-14 1
SGD|S000005261 - symbol:PFS2 "Subunit of the cleavage and... 204 5.3e-14 1
UNIPROTKB|F1NUJ8 - symbol:POC1A "Uncharacterized protein"... 199 5.4e-14 1
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 203 5.5e-14 1
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 203 5.5e-14 1
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 203 5.5e-14 1
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 203 5.5e-14 1
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 203 5.5e-14 1
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 203 5.5e-14 1
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 203 5.5e-14 1
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 203 5.5e-14 1
UNIPROTKB|F1P0F4 - symbol:KATNB1 "Katanin p80 WD40 repeat... 206 6.2e-14 1
UNIPROTKB|Q9GL51 - symbol:PAFAH1B1 "Platelet-activating f... 202 6.6e-14 1
UNIPROTKB|Q9PTR5 - symbol:PAFAH1B1 "Lissencephaly-1 homol... 202 6.6e-14 1
UNIPROTKB|E3W9A3 - symbol:KATNB1 "Katanin p80 WD40 repeat... 204 1.1e-13 1
TAIR|locus:2154438 - symbol:AT5G23430 "AT5G23430" species... 205 1.2e-13 1
FB|FBgn0035922 - symbol:Pex7 "Peroxin 7" species:7227 "Dr... 197 1.3e-13 1
DICTYBASE|DDB_G0288375 - symbol:lis1 "lissencephaly-1 hom... 199 1.6e-13 1
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 198 2.2e-13 1
RGD|1563620 - symbol:RGD1563620 "similar to retinoblastom... 198 2.2e-13 1
FB|FBgn0040207 - symbol:kat80 "katanin 80" species:7227 "... 202 2.7e-13 1
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 197 2.9e-13 1
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 196 3.8e-13 1
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 196 3.8e-13 1
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 196 3.8e-13 1
UNIPROTKB|Q6P315 - symbol:rbbp7 "Histone-binding protein ... 196 3.8e-13 1
UNIPROTKB|Q2HJ56 - symbol:PWP1 "Periodic tryptophan prote... 197 4.2e-13 1
ZFIN|ZDB-GENE-040116-3 - symbol:pafah1b1b "platelet-activ... 195 4.5e-13 1
POMBASE|SPBC354.03 - symbol:swd3 "WD repeat protein Swd3"... 194 4.8e-13 1
UNIPROTKB|G4MTU3 - symbol:MGG_04802 "Periodic tryptophan ... 197 5.2e-13 1
WB|WBGene00004312 - symbol:rba-1 species:6239 "Caenorhabd... 194 6.1e-13 1
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 194 6.7e-13 1
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 193 8.2e-13 1
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 193 8.2e-13 1
TAIR|locus:2131551 - symbol:MSI3 "MULTICOPY SUPPRESSOR OF... 193 8.6e-13 1
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 193 8.7e-13 1
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 193 8.7e-13 1
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 193 8.7e-13 1
WARNING: Descriptions of 943 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0027518 [details] [associations]
symbol:CG7609 species:7227 "Drosophila melanogaster"
[GO:0007031 "peroxisome organization" evidence=ISS] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISS]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0005777 "peroxisome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
UniGene:Dm.3193 FlyBase:FBgn0027518 NextBio:834288 EMBL:AF132181
RefSeq:NP_651720.3 SMR:Q9XZ25 EnsemblMetazoa:FBtr0085543
GeneID:43505 KEGG:dme:Dmel_CG7609 UCSC:CG7609-RB InParanoid:Q9XZ25
GenomeRNAi:43505 Uniprot:Q9XZ25
Length = 776
Score = 857 (306.7 bits), Expect = 1.1e-85, P = 1.1e-85
Identities = 155/285 (54%), Positives = 210/285 (73%)
Query: 13 KADNGLAQPSRNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGAT 72
K +N +A R++ K++ I F E+ N+R GKN NL++S NDVAWS ++ N +AT AT
Sbjct: 28 KDNNQIALAGRSLLKVYSINSNGFTESCNMR-GKNQNLSYSANDVAWSTLDSNLLATAAT 86
Query: 73 NGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQES 132
NG V VW+L + R KQ V+N+H+RT + V+FH E N LISGSQDGT++ FDIR +S
Sbjct: 87 NGVVSVWDLSKFGRQKQLLVYNEHERTAHTVTFHSSEPNILISGSQDGTIKCFDIRSDKS 146
Query: 133 TKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDW 192
+ N+ESVRDV+F+PH+ F++VSENGT+Q WD+R+ +KC QFTAH GP++ CDW
Sbjct: 147 INTYFCNSESVRDVKFSPHTQNIFSAVSENGTVQLWDMRKWDKCMVQFTAHYGPVYTCDW 206
Query: 193 HPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSS 252
HP WLAT SRDK IKVW++ +P LE++I+TIA V R+KWRP+R +H+ASC+LVVD S
Sbjct: 207 HPTRNWLATGSRDKQIKVWNMDGRPGLEHTIHTIAVVGRVKWRPERTYHIASCALVVDYS 266
Query: 253 VNVWDIRRPYIPLASFTEHKDVVSGLAWRG-DPQLFIASSRVSII 296
V+VWDIRRPYIP ASF EH +V +G+AW+G D ++ S+ S I
Sbjct: 267 VHVWDIRRPYIPFASFNEHTNVTTGIAWQGSDSHCLLSISKDSTI 311
>ZFIN|ZDB-GENE-040426-2012 [details] [associations]
symbol:wdr24 "WD repeat domain 24" species:7955
"Danio rerio" [GO:0005777 "peroxisome" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2012 GO:GO:0005777
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 CTD:84219 HOGENOM:HOG000234392
HOVERGEN:HBG080644 EMBL:BC045501 IPI:IPI00491202 RefSeq:NP_998228.1
UniGene:Dr.79568 ProteinModelPortal:Q7ZVL2 GeneID:406336
KEGG:dre:406336 InParanoid:Q7ZVL2 NextBio:20817956
ArrayExpress:Q7ZVL2 Uniprot:Q7ZVL2
Length = 779
Score = 839 (300.4 bits), Expect = 9.1e-84, P = 9.1e-84
Identities = 151/278 (54%), Positives = 202/278 (72%)
Query: 23 RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLG 82
RN+FKI+ +++ FVE NLRVG+ +LNFSC DV W +EEN +AT ATNGAVV WNL
Sbjct: 40 RNIFKIYGLEEDGFVERLNLRVGRKPSLNFSCADVMWHQMEENLLATAATNGAVVTWNLS 99
Query: 83 QISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTES 142
+ R+KQE++F +HKRTVNKV FH E N L+SGSQDG M+ FD+R +ES F +ES
Sbjct: 100 RPCRNKQEQLFTEHKRTVNKVCFHPTEVNMLLSGSQDGFMKCFDLRKKESVSTFSGQSES 159
Query: 143 VRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE-HAWLAT 201
VRDV+F+ + FA+ ENG +Q WD+RRP++ FTAH+GP+F CDWHPE WLAT
Sbjct: 160 VRDVQFSMKDYFTFAASFENGNVQLWDIRRPDRYERMFTAHTGPVFCCDWHPEDRGWLAT 219
Query: 202 ASRDKTIKVWDLSIKPSLE-YSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
RDK +KVWD+S E Y + T ASV+R+KWRP+R++HLA+CS++VD ++ VWD+RR
Sbjct: 220 GGRDKMVKVWDMSTNRVKEIYCVQTFASVARVKWRPERRYHLATCSMMVDHNIYVWDVRR 279
Query: 261 PYIPLASFTEHKDVVSGLAWRG--DPQLFIASSRVSII 296
P+IP A+F EHKDV +G+ WR DP ++ S+ S +
Sbjct: 280 PFIPFATFEEHKDVTTGIVWRHQHDPYFLLSGSKDSTL 317
>UNIPROTKB|F1MJS7 [details] [associations]
symbol:WDR24 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
EMBL:DAAA02057282 IPI:IPI00713947 UniGene:Bt.720
ProteinModelPortal:F1MJS7 Ensembl:ENSBTAT00000025300 Uniprot:F1MJS7
Length = 790
Score = 833 (298.3 bits), Expect = 3.9e-83, P = 3.9e-83
Identities = 147/278 (52%), Positives = 205/278 (73%)
Query: 23 RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLG 82
R++FKI+ I++ +FVE NLRVG+ +LN SC DV W ++EN +AT ATNG VV WNLG
Sbjct: 46 RSIFKIYAIEEEQFVEKLNLRVGRKPSLNLSCADVVWHQMDENLLATAATNGVVVTWNLG 105
Query: 83 QISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTES 142
+ SR+KQ+++F +HKRTVNKV FH E++ L+SGSQDG M+ FD+R ++S F +ES
Sbjct: 106 RPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLSGSQDGFMKCFDLRRKDSVSTFSGQSES 165
Query: 143 VRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE-HAWLAT 201
VRDV+F+ + FAS ENG +Q WD+RRP++C FTAH+GP+F CDWHPE WLAT
Sbjct: 166 VRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGWLAT 225
Query: 202 ASRDKTIKVWDLSIKPSLE-YSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
RDK +KVWD++ + E + + TIASV+R+KWRP+ + HLA+CS++VD +V VWD+RR
Sbjct: 226 GGRDKMVKVWDMATHRAKEVHCVQTIASVARVKWRPECRHHLATCSMMVDHNVYVWDVRR 285
Query: 261 PYIPLASFTEHKDVVSGLAWRG--DPQLFIASSRVSII 296
P++P A F EH+DV +G+AWR DP ++ S+ S +
Sbjct: 286 PFVPAAMFEEHRDVTTGIAWRHPHDPSFLLSGSKDSTL 323
>UNIPROTKB|F1RG37 [details] [associations]
symbol:WDR24 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 CTD:84219 GeneTree:ENSGT00650000093352
EMBL:FP016225 RefSeq:XP_003124754.1 Ensembl:ENSSSCT00000008775
GeneID:100510897 KEGG:ssc:100510897 Uniprot:F1RG37
Length = 790
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 146/278 (52%), Positives = 205/278 (73%)
Query: 23 RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLG 82
R++FKI+ I++ +FVE NLRVG+ +LN SC DV W ++EN +AT ATNG VV WNLG
Sbjct: 46 RSIFKIYAIEEEQFVEKLNLRVGRKPSLNLSCADVVWHQMDENLLATAATNGVVVTWNLG 105
Query: 83 QISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTES 142
+ SR+KQ+++F +HKRTVNKV FH E++ L+SGSQDG M+ FD+R ++S F +ES
Sbjct: 106 RPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLSGSQDGFMKCFDLRRKDSVSTFSGQSES 165
Query: 143 VRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE-HAWLAT 201
VRDV+F+ + FAS ENG +Q WD+RRP++C FTAH+GP+F CDWHPE WLAT
Sbjct: 166 VRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGWLAT 225
Query: 202 ASRDKTIKVWDLSIKPSLE-YSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
RDK +KVWD++ + E + + TIASV+R+KWRP+ + HLA+CS++VD ++ VWD+RR
Sbjct: 226 GGRDKMVKVWDMTTHRAKEVHCVQTIASVARVKWRPECRHHLATCSMMVDHNIYVWDVRR 285
Query: 261 PYIPLASFTEHKDVVSGLAWRG--DPQLFIASSRVSII 296
P++P A F EH+DV +G+AWR DP ++ S+ S +
Sbjct: 286 PFVPAAMFEEHRDVTTGIAWRHPHDPSFLLSGSKDSTL 323
>MGI|MGI:2446285 [details] [associations]
symbol:Wdr24 "WD repeat domain 24" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005777
"peroxisome" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2446285 GO:GO:0005777
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 CTD:84219 GeneTree:ENSGT00650000093352
HOGENOM:HOG000234392 HOVERGEN:HBG080644 OMA:HALYDSR
OrthoDB:EOG48WC1D EMBL:BC037651 IPI:IPI00229321 RefSeq:NP_776102.1
UniGene:Mm.95512 ProteinModelPortal:Q8CFJ9 SMR:Q8CFJ9
PhosphoSite:Q8CFJ9 PaxDb:Q8CFJ9 PRIDE:Q8CFJ9
Ensembl:ENSMUST00000026833 GeneID:268933 KEGG:mmu:268933
UCSC:uc008bcd.2 InParanoid:Q8CFJ9 NextBio:392587 Bgee:Q8CFJ9
CleanEx:MM_WDR24 Genevestigator:Q8CFJ9
GermOnline:ENSMUSG00000025737 Uniprot:Q8CFJ9
Length = 790
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 146/278 (52%), Positives = 205/278 (73%)
Query: 23 RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLG 82
R++FKI+ I++ +FVE NLRVG+ +LN SC DV W ++EN +AT ATNG VV WNLG
Sbjct: 46 RSIFKIYAIEEEQFVEKLNLRVGRKPSLNLSCADVVWHQMDENLLATAATNGVVVTWNLG 105
Query: 83 QISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTES 142
+ SR+KQ+++F +HKRTVNKV FH E++ L+SGSQDG M+ FD+R ++S F +ES
Sbjct: 106 RPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLSGSQDGFMKCFDLRRKDSVSTFSGQSES 165
Query: 143 VRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE-HAWLAT 201
VRDV+F+ + FAS ENG +Q WD+RRP++C FTAH+GP+F CDWHPE WLAT
Sbjct: 166 VRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGWLAT 225
Query: 202 ASRDKTIKVWDLSIKPSLE-YSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
RDK +KVWD++ + E + + TIASV+R+KWRP+ + HLA+CS++VD ++ VWD+RR
Sbjct: 226 GGRDKMVKVWDMTTHRAKEIHCVQTIASVARVKWRPECRHHLATCSMMVDHNIYVWDVRR 285
Query: 261 PYIPLASFTEHKDVVSGLAWRG--DPQLFIASSRVSII 296
P++P A F EH+DV +G+AWR DP ++ S+ S +
Sbjct: 286 PFVPAAMFEEHRDVTTGIAWRHPHDPSFLLSGSKDSTL 323
>UNIPROTKB|G3V8L0 [details] [associations]
symbol:Wdr24 "RCG32838" species:10116 "Rattus norvegicus"
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 EMBL:CH473948
GO:GO:0005053 PANTHER:PTHR22850:SF4 CTD:84219
GeneTree:ENSGT00650000093352 OMA:HALYDSR RefSeq:NP_001178013.1
UniGene:Rn.20330 ProteinModelPortal:G3V8L0
Ensembl:ENSRNOT00000026697 GeneID:360497 KEGG:rno:360497
RGD:1304803 NextBio:672978 Uniprot:G3V8L0
Length = 790
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 146/278 (52%), Positives = 205/278 (73%)
Query: 23 RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLG 82
R++FKI+ I++ +FVE NLRVG+ +LN SC DV W ++EN +AT ATNG VV WNLG
Sbjct: 46 RSIFKIYAIEEEQFVEKLNLRVGRKPSLNLSCADVVWHQMDENLLATAATNGVVVTWNLG 105
Query: 83 QISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTES 142
+ SR+KQ+++F +HKRTVNKV FH E++ L+SGSQDG M+ FD+R ++S F +ES
Sbjct: 106 RPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLSGSQDGFMKCFDLRRKDSVSTFSGQSES 165
Query: 143 VRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE-HAWLAT 201
VRDV+F+ + FAS ENG +Q WD+RRP++C FTAH+GP+F CDWHPE WLAT
Sbjct: 166 VRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGWLAT 225
Query: 202 ASRDKTIKVWDLSIKPSLE-YSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
RDK +KVWD++ + E + + TIASV+R+KWRP+ + HLA+CS++VD ++ VWD+RR
Sbjct: 226 GGRDKMVKVWDMTTHRAKEIHCVQTIASVARVKWRPECRHHLATCSMMVDHNIYVWDVRR 285
Query: 261 PYIPLASFTEHKDVVSGLAWRG--DPQLFIASSRVSII 296
P++P A F EH+DV +G+AWR DP ++ S+ S +
Sbjct: 286 PFVPAAMFEEHRDVTTGIAWRHPHDPSFLLSGSKDSTL 323
>UNIPROTKB|Q96S15 [details] [associations]
symbol:WDR24 "WD repeat-containing protein 24" species:9606
"Homo sapiens" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:CH471112
GO:GO:0016558 EMBL:AE006464 EMBL:Z92544 GO:GO:0005053
PANTHER:PTHR22850:SF4 CTD:84219 HOGENOM:HOG000234392
HOVERGEN:HBG080644 OMA:HALYDSR OrthoDB:EOG48WC1D EMBL:AL136863
EMBL:BC008025 EMBL:BC009761 IPI:IPI00031042 IPI:IPI00045472
RefSeq:NP_115635.1 UniGene:Hs.459632 ProteinModelPortal:Q96S15
SMR:Q96S15 IntAct:Q96S15 MINT:MINT-1444376 STRING:Q96S15
PhosphoSite:Q96S15 DMDM:74762692 PaxDb:Q96S15 PRIDE:Q96S15
DNASU:84219 Ensembl:ENST00000248142 Ensembl:ENST00000293883
GeneID:84219 KEGG:hsa:84219 UCSC:uc002ciz.1 GeneCards:GC16M000734
HGNC:HGNC:20852 HPA:HPA039506 neXtProt:NX_Q96S15
PharmGKB:PA134918496 InParanoid:Q96S15 PhylomeDB:Q96S15
GenomeRNAi:84219 NextBio:73642 Bgee:Q96S15 CleanEx:HS_WDR24
Genevestigator:Q96S15 GermOnline:ENSG00000127580 Uniprot:Q96S15
Length = 920
Score = 491 (177.9 bits), Expect = 2.3e-79, Sum P(2) = 2.3e-79
Identities = 83/159 (52%), Positives = 117/159 (73%)
Query: 140 TESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE-HAW 198
+ESVRDV+F+ + FAS ENG +Q WD+RRP++C FTAH+GP+F CDWHPE W
Sbjct: 293 SESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGW 352
Query: 199 LATASRDKTIKVWDLSIKPSLE-YSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWD 257
LAT RDK +KVWD++ + E + + TIASV+R+KWRP+ + HLA+CS++VD ++ VWD
Sbjct: 353 LATGGRDKMVKVWDMTTHRAKEMHCVQTIASVARVKWRPECRHHLATCSMMVDHNIYVWD 412
Query: 258 IRRPYIPLASFTEHKDVVSGLAWRG--DPQLFIASSRVS 294
+RRP++P A F EH+DV +G+AWR DP ++ S+ S
Sbjct: 413 VRRPFVPAAMFEEHRDVTTGIAWRHPHDPSFLLSGSKDS 451
Score = 342 (125.4 bits), Expect = 2.3e-79, Sum P(2) = 2.3e-79
Identities = 65/121 (53%), Positives = 90/121 (74%)
Query: 23 RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLG 82
R++FKI+ I++ +FVE NLRVG+ +LN SC DV W ++EN +AT ATNG VV WNLG
Sbjct: 108 RSIFKIYAIEEEQFVEKLNLRVGRKPSLNLSCADVVWHQMDENLLATAATNGVVVTWNLG 167
Query: 83 QISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSN-TE 141
+ SR+KQ+++F +HKRTVNKV FH E++ L+SGSQDG M+ FD+R ++S F TE
Sbjct: 168 RPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLSGSQDGFMKCFDLRRKDSVSTFSGEATE 227
Query: 142 S 142
+
Sbjct: 228 A 228
Score = 139 (54.0 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 43/161 (26%), Positives = 75/161 (46%)
Query: 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNW 112
S DV +S + A+ NG V +W++ + R ER+F H V +H + W
Sbjct: 295 SVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRC--ERMFTAHNGPVFCCDWHPEDRGW 352
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNT-ESVRDVEFNPHSPYAFASVSE--NGTIQQWD 169
L +G +D ++++D+ + ++ T SV V++ P + A+ S + I WD
Sbjct: 353 LATGGRDKMVKVWDMTTHRAKEMHCVQTIASVARVKWRPECRHHLATCSMMVDHNIYVWD 412
Query: 170 VRRPEKCFYQFTAHSGPIFACDW-HP-EHAWLATASRDKTI 208
VRRP F H W HP + ++L + S+D ++
Sbjct: 413 VRRPFVPAAMFEEHRDVTTGIAWRHPHDPSFLLSGSKDSSL 453
>UNIPROTKB|I3LF05 [details] [associations]
symbol:WDR24 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352 OMA:HALYDSR
EMBL:FP016225 ProteinModelPortal:I3LF05 Ensembl:ENSSSCT00000028633
Uniprot:I3LF05
Length = 928
Score = 492 (178.3 bits), Expect = 2.4e-79, Sum P(2) = 2.4e-79
Identities = 83/161 (51%), Positives = 118/161 (73%)
Query: 140 TESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE-HAW 198
+ESVRDV+F+ + FAS ENG +Q WD+RRP++C FTAH+GP+F CDWHPE W
Sbjct: 301 SESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGW 360
Query: 199 LATASRDKTIKVWDLSIKPSLE-YSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWD 257
LAT RDK +KVWD++ + E + + TIASV+R+KWRP+ + HLA+CS++VD ++ VWD
Sbjct: 361 LATGGRDKMVKVWDMTTHRAKEVHCVQTIASVARVKWRPECRHHLATCSMMVDHNIYVWD 420
Query: 258 IRRPYIPLASFTEHKDVVSGLAWRG--DPQLFIASSRVSII 296
+RRP++P A F EH+DV +G+AWR DP ++ S+ S +
Sbjct: 421 VRRPFVPAAMFEEHRDVTTGIAWRHPHDPSFLLSGSKDSTL 461
Score = 341 (125.1 bits), Expect = 2.4e-79, Sum P(2) = 2.4e-79
Identities = 63/114 (55%), Positives = 87/114 (76%)
Query: 23 RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLG 82
R++FKI+ I++ +FVE NLRVG+ +LN SC DV W ++EN +AT ATNG VV WNLG
Sbjct: 107 RSIFKIYAIEEEQFVEKLNLRVGRKPSLNLSCADVVWHQMDENLLATAATNGVVVTWNLG 166
Query: 83 QISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIF 136
+ SR+KQ+++F +HKRTVNKV FH E++ L+SGSQDG M+ FD+R ++S F
Sbjct: 167 RPSRNKQDQLFTEHKRTVNKVCFHPTEAHVLLSGSQDGFMKCFDLRRKDSVSTF 220
Score = 145 (56.1 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 44/161 (27%), Positives = 75/161 (46%)
Query: 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNW 112
S DV +S + A+ NG V +W++ + R ER+F H V +H + W
Sbjct: 303 SVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRC--ERMFTAHNGPVFCCDWHPEDRGW 360
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNT-ESVRDVEFNPHSPYAFASVSE--NGTIQQWD 169
L +G +D ++++D+ + ++ T SV V++ P + A+ S + I WD
Sbjct: 361 LATGGRDKMVKVWDMTTHRAKEVHCVQTIASVARVKWRPECRHHLATCSMMVDHNIYVWD 420
Query: 170 VRRPEKCFYQFTAHSGPIFACDW-HP-EHAWLATASRDKTI 208
VRRP F H W HP + ++L + S+D T+
Sbjct: 421 VRRPFVPAAMFEEHRDVTTGIAWRHPHDPSFLLSGSKDSTL 461
>UNIPROTKB|Q5ZMV9 [details] [associations]
symbol:WDR24 "WD repeat-containing protein 24" species:9031
"Gallus gallus" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 eggNOG:NOG299301 EMBL:AJ719275
IPI:IPI00651573 RefSeq:NP_001025799.1 UniGene:Gga.22342
ProteinModelPortal:Q5ZMV9 Ensembl:ENSGALT00000003862 GeneID:416406
KEGG:gga:416406 CTD:84219 GeneTree:ENSGT00650000093352
HOGENOM:HOG000234392 HOVERGEN:HBG080644 InParanoid:Q5ZMV9
OMA:HALYDSR OrthoDB:EOG48WC1D NextBio:20819868 Uniprot:Q5ZMV9
Length = 705
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 126/239 (52%), Positives = 173/239 (72%)
Query: 62 IEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGT 121
++EN +AT ATNG VV WNLG+ SR+KQ+++F +HKRTVNKV FH E L+SGSQDG
Sbjct: 1 MDENLLATAATNGVVVTWNLGKPSRNKQDQLFTEHKRTVNKVCFHPTEVYMLLSGSQDGY 60
Query: 122 MRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFT 181
M+ FD+R ++S F +ESVRDV+F+ + FA+ ENG +Q WD+RRP++ FT
Sbjct: 61 MKCFDLRKKDSVSTFSGQSESVRDVQFSIRDYFTFAATFENGNVQLWDIRRPDRYERMFT 120
Query: 182 AHSGPIFACDWHPE-HAWLATASRDKTIKVWDLSIKPSLE-YSINTIASVSRIKWRPQRK 239
AH+GP+F CDWHPE WLAT RDK +KVWD++ + E Y + TIASV+R+KWRP+ K
Sbjct: 121 AHNGPVFCCDWHPEDRGWLATGGRDKMVKVWDMNTTRAKEIYCVQTIASVARVKWRPECK 180
Query: 240 FHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRG--DPQLFIASSRVSII 296
H+A+CS++VD ++ VWD+RRP+IP A F EHKDV +G+ WR DP ++ S+ S +
Sbjct: 181 HHIATCSMMVDHNIYVWDVRRPFIPSAMFEEHKDVTTGIVWRHLHDPYFLLSGSKDSTL 239
Score = 141 (54.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 44/161 (27%), Positives = 72/161 (44%)
Query: 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNW 112
S DV +S + A NG V +W++ + R ER+F H V +H + W
Sbjct: 81 SVRDVQFSIRDYFTFAATFENGNVQLWDIRRPDR--YERMFTAHNGPVFCCDWHPEDRGW 138
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNT-ESVRDVEFNPHSPYAFASVSE--NGTIQQWD 169
L +G +D ++++D+ + +I+ T SV V++ P + A+ S + I WD
Sbjct: 139 LATGGRDKMVKVWDMNTTRAKEIYCVQTIASVARVKWRPECKHHIATCSMMVDHNIYVWD 198
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHA--WLATASRDKTI 208
VRRP F H W H +L + S+D T+
Sbjct: 199 VRRPFIPSAMFEEHKDVTTGIVWRHLHDPYFLLSGSKDSTL 239
>DICTYBASE|DDB_G0287817 [details] [associations]
symbol:wdr24 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005053 "peroxisome matrix targeting
signal-2 binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0287817 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GenomeReviews:CM000154_GR
EMBL:AAFI02000104 GO:GO:0016558 GO:GO:0005053 PANTHER:PTHR22850:SF4
RefSeq:XP_637077.1 ProteinModelPortal:Q54JS5
EnsemblProtists:DDB0304352 GeneID:8626332 KEGG:ddi:DDB_G0287817
OMA:NEPCKGL Uniprot:Q54JS5
Length = 1023
Score = 666 (239.5 bits), Expect = 7.1e-65, P = 7.1e-65
Identities = 129/279 (46%), Positives = 187/279 (67%)
Query: 23 RNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWS-CIEENH---IATGATNGAVVV 78
R++ KI +++ EF T NLR GK +LN++ ND W + EN+ IAT ATNGAVV+
Sbjct: 38 RDIVKIVSVQNNEFKVTSNLRAGKTQSLNYTGNDCCWHPSLLENYRFLIATAATNGAVVI 97
Query: 79 WNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR-CQESTKI-F 136
WN + ERVF DH R VNK+++H + + +++GSQD T+R++DIR ++KI F
Sbjct: 98 WNTVREGSKSVERVFTDHSRAVNKLAWHPEKLDCILTGSQDNTLRMWDIRDSANASKITF 157
Query: 137 HSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEH 196
+ES+RDV+FNP FA+ +NGTIQ WD+R+P + T+H G + DWHPE
Sbjct: 158 SPKSESIRDVQFNPSQANQFAAAFDNGTIQLWDIRKPTIAVEKITSHQGLVLTIDWHPEE 217
Query: 197 A-WLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNV 255
+A+ RD+ I+VWD S SL +++TI+SVSRIKWRP K+H+ASCS +VD +++
Sbjct: 218 KNIIASGGRDRAIRVWDFSNGKSLN-NVSTISSVSRIKWRPGNKWHIASCSSIVDFQIHI 276
Query: 256 WDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVS 294
WD+++PYIPL SFT+H+DV +GL W+ P I+ S+ S
Sbjct: 277 WDVKKPYIPLFSFTDHRDVPTGLIWKS-PSSLISCSKDS 314
>UNIPROTKB|F1PFU7 [details] [associations]
symbol:WDR24 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016558 "protein import into peroxisome
matrix" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016558
GO:GO:0005053 PANTHER:PTHR22850:SF4 GeneTree:ENSGT00650000093352
OMA:HALYDSR EMBL:AAEX03004674 Ensembl:ENSCAFT00000031193
Uniprot:F1PFU7
Length = 705
Score = 492 (178.3 bits), Expect = 6.1e-47, P = 6.1e-47
Identities = 83/161 (51%), Positives = 118/161 (73%)
Query: 140 TESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE-HAW 198
+ESVRDV+F+ + FAS ENG +Q WD+RRP++C FTAH+GP+F CDWHPE W
Sbjct: 78 SESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGW 137
Query: 199 LATASRDKTIKVWDLSIKPSLE-YSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWD 257
LAT RDK +KVWD++ + E + + TIASV+R+KWRP+ + HLA+CS++VD ++ VWD
Sbjct: 138 LATGGRDKMVKVWDMTTHRAKEVHCVQTIASVARVKWRPECRHHLATCSMMVDHNIYVWD 197
Query: 258 IRRPYIPLASFTEHKDVVSGLAWRG--DPQLFIASSRVSII 296
+RRP++P A F EH+DV +G+AWR DP ++ S+ S +
Sbjct: 198 VRRPFVPAAMFEEHRDVTTGIAWRHPHDPSFLLSGSKDSTL 238
Score = 145 (56.1 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 44/161 (27%), Positives = 75/161 (46%)
Query: 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNW 112
S DV +S + A+ NG V +W++ + R ER+F H V +H + W
Sbjct: 80 SVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRC--ERMFTAHNGPVFCCDWHPEDRGW 137
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNT-ESVRDVEFNPHSPYAFASVSE--NGTIQQWD 169
L +G +D ++++D+ + ++ T SV V++ P + A+ S + I WD
Sbjct: 138 LATGGRDKMVKVWDMTTHRAKEVHCVQTIASVARVKWRPECRHHLATCSMMVDHNIYVWD 197
Query: 170 VRRPEKCFYQFTAHSGPIFACDW-HP-EHAWLATASRDKTI 208
VRRP F H W HP + ++L + S+D T+
Sbjct: 198 VRRPFVPAAMFEEHRDVTTGIAWRHPHDPSFLLSGSKDSTL 238
>POMBASE|SPAC4F8.11 [details] [associations]
symbol:SPAC4F8.11 "WD repeat protein, human WDR24 family"
species:4896 "Schizosaccharomyces pombe" [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=NAS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0016558 "protein import into peroxisome matrix"
evidence=IEA] [GO:0043234 "protein complex" evidence=NAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPAC4F8.11 GO:GO:0005829 GO:GO:0043234
EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0005778 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0016558 GO:GO:0005053
PANTHER:PTHR22850:SF4 PIR:T38840 RefSeq:NP_593862.1
ProteinModelPortal:O14186 EnsemblFungi:SPAC4F8.11.1 GeneID:2543518
KEGG:spo:SPAC4F8.11 OrthoDB:EOG4RBTST NextBio:20804528
Uniprot:O14186
Length = 846
Score = 425 (154.7 bits), Expect = 5.5e-39, P = 5.5e-39
Identities = 92/274 (33%), Positives = 154/274 (56%)
Query: 51 NFSCNDVAW-SCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVE 109
+ SCNDV W S N I T + G + VW++ + + FN+H R V+K+
Sbjct: 90 HISCNDVKWGSSFASNLIFTCSPLGNLNVWDVN-LEALLYD--FNEHSRAVHKLDISSFH 146
Query: 110 SNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
+++++ SQDG ++L+D + ST F N+E+ RDV F+P P F + ++G +Q+WD
Sbjct: 147 PSYVLTASQDGLIKLWDYKESSSTITFRGNSEAARDVVFSPSEPNEFVAAYDSGILQKWD 206
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD-LSIKPSLEYSINTIAS 228
+R P+ F + AH+G + ++ P +LA+ RDKTI++WD S K +IN ++
Sbjct: 207 IRFPKLPFLKLAAHNGVVLCVNYSPNGVFLASCGRDKTIRIWDSTSNKKKSLITINNVSP 266
Query: 229 VSRIKWRPQRKF-----HLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGD 283
++ ++WRP + LAS SLV D+++NVWDI RPYIP + + H +VS + W
Sbjct: 267 LNCVRWRPANQQSRGSNQLASSSLVGDTAINVWDITRPYIPYRTVSCHDSIVSTMHW-AS 325
Query: 284 PQLFIASSRVSIIPRAKNIKIFIASSRVSIIPRA 317
+L + S+ I + + F + + ++PRA
Sbjct: 326 TELLWSCSKDGIFSQTRVENAF---NCIDMLPRA 356
>ASPGD|ASPL0000074357 [details] [associations]
symbol:AN4518 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001303 EMBL:AACD01000078
OrthoDB:EOG4RBTST RefSeq:XP_662122.1 ProteinModelPortal:Q5B4L2
EnsemblFungi:CADANIAT00005923 GeneID:2872316 KEGG:ani:AN4518.2
HOGENOM:HOG000184038 OMA:DVKWSHG Uniprot:Q5B4L2
Length = 1289
Score = 335 (123.0 bits), Expect = 5.8e-29, P = 5.8e-29
Identities = 82/261 (31%), Positives = 135/261 (51%)
Query: 56 DVAWSC-IEENHIATGATNGAVVVWNLGQISRSKQERV-FNDHKRTVNKVSFHYVESNWL 113
DV WS + + IAT NG +VV++L R+ E F H R V++++F+ + WL
Sbjct: 153 DVKWSHGLYDQIIATAVANGRIVVYDL---HRTGLEYCRFQGHSRQVHRLAFNPHQPAWL 209
Query: 114 ISGSQDGTMRLFDIRCQESTK---------IFHSNTESVRDVEFNPHSPYAFASVSENGT 164
+SGSQD +R++D+R + + ++SN+++VRDV ++P FA +++G
Sbjct: 210 LSGSQDAHIRMWDLRTVPTDRGVSVCGSRDQYNSNSDAVRDVRWSPGDGVLFAVATDSGA 269
Query: 165 IQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSI------KPS 218
IQ WD+R+ + TAH P ++ DWHP+ + + D+ +KVW+ SI KP
Sbjct: 270 IQLWDIRKSSSPILRITAHDRPCYSVDWHPDGKHIVSGGTDRQVKVWEFSITAERRQKPL 329
Query: 219 LEYSINTIASVSRIKWRP---QRKFHLAS---CSLVV------DSSVNVWDIRRPYIPLA 266
++ T +V ++WRP R+ + S VV D V++WD RRP+IP
Sbjct: 330 FQF--RTPQAVLNVRWRPPSWSRESDSSGDWQSSQVVTSYDKEDPRVHLWDFRRPHIPFR 387
Query: 267 SFTEHKDVVSGLAWRGDPQLF 287
F + + L W L+
Sbjct: 388 EFDRYDSTATDLLWHSKDLLW 408
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 73/229 (31%), Positives = 117/229 (51%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
D WS E H+A+ + +G++ +W+ S + + F +H + V V ++ V + I+
Sbjct: 63 DCTWSEENECHVASSSGDGSIKIWDTQAPSGGRPIKSFEEHTKEVYSVDWNLVTKDTFIT 122
Query: 116 GSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEK 175
GS D ++++++ R S K F + + ++P + + FASVS + T++ WD R +
Sbjct: 123 GSWDQSIKIWNPRMDRSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWD-SRDNR 181
Query: 176 CFYQFTAHSGPIFACDWHPEH-AWLATASRDKTIKVWDLSI--KPSLEYSINTIASVSRI 232
AH I CDW+ + + T S DKTI++WD+ +P+ +T A V RI
Sbjct: 182 SLNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIRYPDRPTTILRGHTYA-VRRI 240
Query: 233 KWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPL-ASFTEHKDVVSGLAW 280
K P + LASCS D SV VWD R P+ A H + V GL W
Sbjct: 241 KCSPHSESMLASCSY--DMSVIVWDRAREQDPIIARMDHHTEFVVGLDW 287
Score = 170 (64.9 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 49/209 (23%), Positives = 98/209 (46%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
V W+ + ++ TG+ + ++ +WN ++ RS + F +H+ + + ++ S
Sbjct: 110 VDWNLVTKDTFITGSWDQSIKIWN-PRMDRSL--KTFREHRYCIYSAIWSPRNAHLFASV 166
Query: 117 SQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
S D T++++D R S ++ + ++N ++ + S + TI+ WD+R P++
Sbjct: 167 SGDRTLKIWDSRDNRSLNTIKAHDHEILTCDWNKYNDKEVVTGSVDKTIRIWDIRYPDRP 226
Query: 177 FYQFTAHSGPI--FACDWHPEHAWLATASRDKTIKVWDLSIK--PSLEYSINTIASVSRI 232
H+ + C H E + LA+ S D ++ VWD + + P + + V +
Sbjct: 227 TTILRGHTYAVRRIKCSPHSE-SMLASCSYDMSVIVWDRAREQDPIIARMDHHTEFVVGL 285
Query: 233 KWRPQRKFHLASCSLVVDSSVNVWDIRRP 261
W +ASCS D V VW++ RP
Sbjct: 286 DWNMFIDGQMASCSW--DEQVCVWNLGRP 312
Score = 157 (60.3 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 62/258 (24%), Positives = 110/258 (42%)
Query: 46 KNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSF 105
K + +F+ V +S EE +A + ++ N Q +R K +
Sbjct: 2 KRFHSHFNGYSVEFSPFEEQRLACVTSQHFGIIGNGRQYILDVLDRDIGAFKTFDTRDGL 61
Query: 106 H---YVESN--WLISGSQDGTMRLFDIRCQES---TKIFHSNTESVRDVEFNPHSPYAFA 157
+ + E N + S S DG+++++D + K F +T+ V V++N + F
Sbjct: 62 YDCTWSEENECHVASSSGDGSIKIWDTQAPSGGRPIKSFEEHTKEVYSVDWNLVTKDTFI 121
Query: 158 SVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWL-ATASRDKTIKVWDLSIK 216
+ S + +I+ W+ R ++ F H I++ W P +A L A+ S D+T+K+WD
Sbjct: 122 TGSWDQSIKIWNPRM-DRSLKTFREHRYCIYSAIWSPRNAHLFASVSGDRTLKIWDSRDN 180
Query: 217 PSLEYSINTIAS----VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHK 272
SL NTI + + W + + S VD ++ +WDIR P P H
Sbjct: 181 RSL----NTIKAHDHEILTCDWNKYNDKEVVTGS--VDKTIRIWDIRYPDRPTTILRGHT 234
Query: 273 DVVSGLAWRGDPQLFIAS 290
V + + +AS
Sbjct: 235 YAVRRIKCSPHSESMLAS 252
>TAIR|locus:2029939 [details] [associations]
symbol:PEX7 "AT1G29260" species:3702 "Arabidopsis
thaliana" [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005778 EMBL:AC021043
HSSP:P16649 GO:GO:0080008 GO:GO:0006625 TCDB:3.A.20.1.2
EMBL:AF130973 EMBL:BT024863 IPI:IPI00548845 PIR:B86415
RefSeq:NP_174220.1 UniGene:At.11271 ProteinModelPortal:Q9XF57
SMR:Q9XF57 STRING:Q9XF57 PaxDb:Q9XF57 PRIDE:Q9XF57
EnsemblPlants:AT1G29260.1 GeneID:839800 KEGG:ath:AT1G29260
GeneFarm:3660 TAIR:At1g29260 HOGENOM:HOG000204332 InParanoid:Q9LP54
KO:K13341 OMA:GHEYAVR PhylomeDB:Q9XF57 ProtClustDB:CLSN2679693
Genevestigator:Q9XF57 Uniprot:Q9XF57
Length = 317
Score = 256 (95.2 bits), Expect = 5.5e-22, P = 5.5e-22
Identities = 66/225 (29%), Positives = 108/225 (48%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV WS ++ + +G+V +++ S R F +H R V V ++ + ++
Sbjct: 65 DVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPTRRDSFLT 124
Query: 116 GSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEK 175
S D T++L+ + S + F + V +NP FAS S + T++ WDVR P
Sbjct: 125 SSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGS 184
Query: 176 CFYQFTAHSGPIFACDWHP-EHAWLATASRDKTIKVWDL-SIKPSLEYSINTIASVSRIK 233
AH I +CDW+ + LAT+S DKT+KVWD+ S + L +V ++K
Sbjct: 185 TMI-IPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVK 243
Query: 234 WRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGL 278
+ P R+ +ASCS D SV +WD + + H + G+
Sbjct: 244 FSPHRRSLIASCSY--DMSVCLWDYMVEDALVGRYDHHTEFAVGI 286
Score = 181 (68.8 bits), Expect = 8.7e-12, P = 8.7e-12
Identities = 58/223 (26%), Positives = 100/223 (44%)
Query: 73 NGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQES 132
NG + V L + E V D V V + + LI+ DG+++++D
Sbjct: 36 NGRIHVLELAPGAPGVTESVSYDTADAVYDVCWSESHDSVLIAAIGDGSVKIYDTALPPP 95
Query: 133 T---KIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFA 189
+ + F + V+ V++NP +F + S + T++ W + RP F H+ ++
Sbjct: 96 SNPIRSFQEHAREVQSVDYNPTRRDSFLTSSWDDTVKLWAMDRPASV-RTFKEHAYCVYQ 154
Query: 190 CDWHPEHAWL-ATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHLASCSL 247
W+P+H + A+AS D T+++WD+ +P I + W LA+ S
Sbjct: 155 AVWNPKHGDVFASASGDCTLRIWDVR-EPGSTMIIPAHDFEILSCDWNKYDDCILATSS- 212
Query: 248 VVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIAS 290
VD +V VWD+R +PLA H V + + + IAS
Sbjct: 213 -VDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIAS 254
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 254 (94.5 bits), Expect = 9.0e-22, P = 9.0e-22
Identities = 67/237 (28%), Positives = 115/237 (48%)
Query: 46 KNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSF 105
++ + N DV WS E+ + T + +G++ +W++ + Q V+ +H + V +
Sbjct: 60 RSFDWNDGLFDVTWSENNEHVLITSSGDGSLQIWDIAKPKGPLQ--VYKEHTQEAYSVDW 117
Query: 106 HYVESNWLI-SGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGT 164
L+ SGS D T +L+D +S + F + + ++PH P FAS S + T
Sbjct: 118 SQTRGEQLVVSGSWDQTAKLWDPAVGKSLRTFKGHEGVIYSTIWSPHIPGCFASASGDQT 177
Query: 165 IQQWDVRRPEKCFYQFTAHSGPIFACDW--HPEHAWLATASRDKTIKVWDL-SIKPSLEY 221
++ WDV+ P AH I +CDW + E+ L T + D ++K WDL +++ +
Sbjct: 178 LRIWDVKAPGVRLV-IPAHQAEILSCDWCKYDENL-LVTGAVDCSLKGWDLRNVRQPVFI 235
Query: 222 SINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGL 278
+ +V R+K+ P LASCS D +V WD +P L + H + GL
Sbjct: 236 LLGHTYAVRRVKFSPFHATLLASCSY--DFTVRFWDFSKPNPLLETVEHHTEFTCGL 290
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 70/242 (28%), Positives = 120/242 (49%)
Query: 42 LRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVN 101
LR+ ++ + N DV WS E+ + T + +G++ +W+ + + Q V+ +H + V
Sbjct: 58 LRLFRSFDWNDGLFDVTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQ--VYKEHAQEVY 115
Query: 102 KVSFHYVESNWLI-SGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVS 160
V + L+ SGS D T++L+D +S F + + ++PH P FAS S
Sbjct: 116 SVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESIIYSTIWSPHIPGCFASAS 175
Query: 161 ENGTIQQWDVRRPEKCFYQFTAHSGPIFACDW--HPEHAWLATASRDKTIKVWDL-SIK- 216
+ T++ WDV+ AH I +CDW + E+ L T + D +++ WDL +++
Sbjct: 176 GDQTLRIWDVKAAGVRIV-IPAHQAEILSCDWCKYNENL-LVTGAVDCSLRGWDLRNVRQ 233
Query: 217 PSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVS 276
P E +T A + R+K+ P LASCS D +V W+ +P L + H +
Sbjct: 234 PVFELLGHTYA-IRRVKFSPFHASVLASCSY--DFTVRFWNFSKPDSLLETVEHHTEFTC 290
Query: 277 GL 278
GL
Sbjct: 291 GL 292
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 70/242 (28%), Positives = 120/242 (49%)
Query: 42 LRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVN 101
LR+ ++ + N DV WS E+ + T + +G++ +W+ + + Q V+ +H + V
Sbjct: 58 LRLFRSFDWNDGLFDVTWSENNEHILVTCSGDGSLQLWDTAKATGPLQ--VYKEHTQEVY 115
Query: 102 KVSFHYVESNWLI-SGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVS 160
V + L+ SGS D T++L+D +S F + + ++PH P FAS S
Sbjct: 116 SVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESVIYSTIWSPHIPGCFASAS 175
Query: 161 ENGTIQQWDVRRPEKCFYQFTAHSGPIFACDW--HPEHAWLATASRDKTIKVWDL-SIK- 216
+ T++ WDV+ AH I +CDW + E+ L T + D +++ WDL +++
Sbjct: 176 GDQTLRIWDVKSTGVRIV-VPAHQAEILSCDWCKYNENL-LVTGAVDCSLRGWDLRNVRQ 233
Query: 217 PSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVS 276
P E +T A + R+K+ P LASCS D +V W+ +P L + H +
Sbjct: 234 PVFELLGHTYA-IRRVKFSPFHASVLASCSY--DFTVRFWNFSKPDPLLETVEHHTEFTC 290
Query: 277 GL 278
GL
Sbjct: 291 GL 292
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 70/242 (28%), Positives = 120/242 (49%)
Query: 42 LRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVN 101
LR+ ++ + N DV WS E+ + T + +G++ +W+ + + Q VF +H + V
Sbjct: 58 LRLFRSFDWNDGLFDVTWSENNEHVLVTCSGDGSLQLWDTARATGPLQ--VFKEHTQEVY 115
Query: 102 KVSFHYVESNWLI-SGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVS 160
V + L+ SGS D T++L+D +S F + + ++PH P FAS S
Sbjct: 116 SVDWSQTRGEQLVVSGSWDQTVKLWDPTVGKSLCTFRGHESVIYSTIWSPHIPGCFASSS 175
Query: 161 ENGTIQQWDVRRPEKCFYQFTAHSGPIFACDW--HPEHAWLATASRDKTIKVWDL-SIK- 216
+ T++ WDV+ AH I +CDW + E+ + T + D +++ WDL +++
Sbjct: 176 GDQTLRIWDVKTTGVRIV-VPAHQAEILSCDWCKYNENL-VVTGAVDCSLRGWDLRNVQQ 233
Query: 217 PSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVS 276
P E +T A + R+K+ P LASCS D +V W+ +P L + H +
Sbjct: 234 PVFELLGHTYA-IRRVKFSPFHASVLASCSY--DFTVRFWNFSKPDPLLETVEHHTEFTC 290
Query: 277 GL 278
GL
Sbjct: 291 GL 292
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 68/242 (28%), Positives = 119/242 (49%)
Query: 42 LRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVN 101
L++ ++ + N DV WS E+ + T + +G++ +W+ + + Q V+ +H + V
Sbjct: 53 LQIFRSFDWNDGLFDVTWSENNEHVLVTCSGDGSLQLWDTAKATGPLQ--VYKEHTQEVY 110
Query: 102 KVSFHYVESNWLI-SGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVS 160
V + L+ SGS D T++++D S F + + ++PH P FAS S
Sbjct: 111 SVDWSQTRDEQLVVSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPGCFASAS 170
Query: 161 ENGTIQQWDVRRPEKCFYQFTAHSGPIFACDW--HPEHAWLATASRDKTIKVWDL-SIK- 216
+ T++ WDV+ AH I +CDW + E+ L T + D +++ WDL +++
Sbjct: 171 GDQTLRIWDVKTTGVRIV-IPAHQAEILSCDWCKYNENL-LVTGAVDCSLRGWDLRNVRQ 228
Query: 217 PSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVS 276
P E +T A + R+K+ P LASCS D +V W+ +P L + H +
Sbjct: 229 PVFELLGHTYA-IRRVKFSPFHASVLASCSY--DFTVRFWNFSKPDPLLETVEHHTEFTC 285
Query: 277 GL 278
GL
Sbjct: 286 GL 287
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 72/253 (28%), Positives = 122/253 (48%)
Query: 34 TEFVETHN---LRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQE 90
T + HN LR+ ++ + + DV WS E+ + T + +G++ +W+ + Q
Sbjct: 47 TLLILDHNESGLRIFRSFDWTDALFDVTWSENNEHVLVTCSGDGSLQLWDTAGAAGPLQ- 105
Query: 91 RVFNDHKRTVNKVSFHYVESNWLI-SGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFN 149
V+ +H + V V + L+ SGS D T++L+D S F + + ++
Sbjct: 106 -VYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVGRSLCTFKGHESIIYSTIWS 164
Query: 150 PHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDW--HPEHAWLATASRDKT 207
PH P FAS S + T++ WDV+ AH I +CDW + E+ L T + D +
Sbjct: 165 PHIPGCFASASGDQTLRIWDVKTTGVRIV-VPAHQAEILSCDWCKYNENL-LVTGAVDCS 222
Query: 208 IKVWDL-SIK-PSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPL 265
++ WDL +++ P E +T A + R+K+ P LASCS D +V W+ +P L
Sbjct: 223 LRGWDLRNVRQPVFELLGHTYA-IRRVKFSPFYASVLASCSY--DFTVRFWNFSKPNPLL 279
Query: 266 ASFTEHKDVVSGL 278
+ H + GL
Sbjct: 280 ETVEHHTEFTCGL 292
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 234 (87.4 bits), Expect = 1.2e-19, P = 1.2e-19
Identities = 67/242 (27%), Positives = 119/242 (49%)
Query: 42 LRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVN 101
L++ ++ + N DV WS E+ + T + +G++ +W+ + + Q V+ +H + V
Sbjct: 53 LQIFRSFDWNDGLFDVTWSENNEHVLVTCSGDGSLQLWDTAKATGPLQ--VYKEHTQEVY 110
Query: 102 KVSFHYVESNWLI-SGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVS 160
V + L+ SGS D T++++D S F + + ++PH P FAS S
Sbjct: 111 SVDWSQTRGEQLVVSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPGCFASAS 170
Query: 161 ENGTIQQWDVRRPEKCFYQFTAHSGPIFACDW--HPEHAWLATASRDKTIKVWDL-SIK- 216
+ T++ WDV+ AH I +CDW + E+ + T + D +++ WDL +++
Sbjct: 171 GDQTLRIWDVKTTGVRIV-IPAHQTEILSCDWCKYNENL-VVTGAVDCSLRGWDLRNVRQ 228
Query: 217 PSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVS 276
P E +T A + R+K+ P LASCS D +V W+ +P L + H +
Sbjct: 229 PVFELLGHTYA-IRRVKFSPFHASVLASCSY--DFTVRFWNFSKPDPLLETVEHHTEFTC 285
Query: 277 GL 278
GL
Sbjct: 286 GL 287
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 229 (85.7 bits), Expect = 1.6e-18, P = 1.6e-18
Identities = 66/242 (27%), Positives = 119/242 (49%)
Query: 42 LRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVN 101
L++ ++ + + DV WS E+ + T + +G++ +W+ + + Q V+ +H + V
Sbjct: 53 LQIFRSFDWSDGLFDVTWSEDNEHVLVTCSGDGSLQLWDTAKATGPLQ--VYKEHTQEVY 110
Query: 102 KVSFHYVESNWLI-SGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVS 160
V + L+ SGS D T++++D S F + + ++PH P FAS S
Sbjct: 111 SVDWSQTRGEQLVVSGSWDQTVKVWDPTVGNSLCTFRGHESVIYSTIWSPHIPGCFASAS 170
Query: 161 ENGTIQQWDVRRPEKCFYQFTAHSGPIFACDW--HPEHAWLATASRDKTIKVWDL-SIK- 216
+ T++ WDV+ AH I +CDW + E+ + T + D +++ WDL +++
Sbjct: 171 GDQTLRIWDVKTAGVRIV-IPAHQTEILSCDWCKYNENL-VVTGAVDCSLRGWDLRNVRQ 228
Query: 217 PSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVS 276
P E +T A + R+K+ P LASCS D +V W+ +P L + H +
Sbjct: 229 PVFELLGHTYA-IRRVKFSPFHASVLASCSY--DFTVRFWNFSKPDPLLETVEHHTEFTC 285
Query: 277 GL 278
GL
Sbjct: 286 GL 287
>TAIR|locus:2202129 [details] [associations]
symbol:AT1G11160 "AT1G11160" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0080008 GO:GO:0008352 PANTHER:PTHR19845 IPI:IPI00528177
RefSeq:NP_172582.2 UniGene:At.43445 ProteinModelPortal:F4I7E1
SMR:F4I7E1 PRIDE:F4I7E1 EnsemblPlants:AT1G11160.1 GeneID:837657
KEGG:ath:AT1G11160 OMA:DETHATQ Uniprot:F4I7E1
Length = 1021
Score = 233 (87.1 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 51/159 (32%), Positives = 86/159 (54%)
Query: 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLI 114
+ VA++ EE + GA++G + +W+L + SK R F H+ + V FH +L
Sbjct: 62 DSVAFNS-EEVLVLAGASSGVIKLWDLEE---SKMVRAFTGHRSNCSAVEFHPF-GEFLA 116
Query: 115 SGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPE 174
SGS D +R++D R + + + +T + +EF+P + + +N ++ WD+
Sbjct: 117 SGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDN-VVKVWDLTAG- 174
Query: 175 KCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
K ++F H GPI + D+HP LAT S D+T+K WDL
Sbjct: 175 KLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDL 213
Score = 166 (63.5 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 54/187 (28%), Positives = 83/187 (44%)
Query: 93 FNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHS 152
F H VN +S S L++G D + L+ I S +T V V FN
Sbjct: 11 FVAHSGNVNCLSIGKKTSRLLLTGGDDYKVNLWSIGKTTSPMSLCGHTSPVDSVAFNSEE 70
Query: 153 PYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
A S +G I+ WD+ K FT H A ++HP +LA+ S D ++VWD
Sbjct: 71 VLVLAGAS-SGVIKLWDLEE-SKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWD 128
Query: 213 LSIKPSLE-YSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEH 271
K ++ Y +T +S I++ P ++ + S L D+ V VWD+ + L F H
Sbjct: 129 TRKKGCIQTYKGHT-RGISTIEFSPDGRW-VVSGGL--DNVVKVWDLTAGKL-LHEFKCH 183
Query: 272 KDVVSGL 278
+ + L
Sbjct: 184 EGPIRSL 190
>ZFIN|ZDB-GENE-040426-1954 [details] [associations]
symbol:katnb1 "katanin p80 (WD repeat containing)
subunit B 1" species:7955 "Danio rerio" [GO:0008017 "microtubule
binding" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1954 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 HOGENOM:HOG000008039 GO:GO:0008352
HAMAP:MF_03022 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
EMBL:BC047819 IPI:IPI00483795 RefSeq:NP_998183.1 UniGene:Dr.76809
ProteinModelPortal:Q7ZUV2 Ensembl:ENSDART00000014632 GeneID:406291
KEGG:dre:406291 InParanoid:Q7ZUV2 OMA:YWERNDI OrthoDB:EOG470TGV
NextBio:20817922 ArrayExpress:Q7ZUV2 Bgee:Q7ZUV2 Uniprot:Q7ZUV2
Length = 694
Score = 231 (86.4 bits), Expect = 4.5e-17, P = 4.5e-17
Identities = 62/226 (27%), Positives = 114/226 (50%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ATG + V +W +S+ H V + F+ E +++GS G++RL+D
Sbjct: 36 LATGGEDCRVNIW---AVSKPNCIMSLTGHTSAVGCIQFNSSEER-VVAGSLSGSLRLWD 91
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ + + + S+ ++F+P Y AS S + I+ WDVRR + C +++ H+
Sbjct: 92 LEAAKILRTLMGHKASISSLDFHPMGEY-LASGSVDSNIKLWDVRR-KGCVFRYKGHTQA 149
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTIASVSRIKWRPQRKFHLASC 245
+ + P+ WLA+AS D T+K+WDL K E++ +T A V+ +++ P ++ LAS
Sbjct: 150 VRCLAFSPDGKWLASASDDSTVKLWDLIAGKMITEFTSHTSA-VNVVQFHPN-EYLLASG 207
Query: 246 SLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
S D +V +WD+ + + + S VV + + D + S
Sbjct: 208 S--ADRTVKLWDLEK-FNMIGSSEGETGVVRSVLFNPDGSCLYSGS 250
Score = 219 (82.2 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 49/171 (28%), Positives = 94/171 (54%)
Query: 47 NINLNFSCNDVAWSCIE----ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNK 102
N ++ + + A CI+ E + G+ +G++ +W+L +K R HK +++
Sbjct: 54 NCIMSLTGHTSAVGCIQFNSSEERVVAGSLSGSLRLWDL---EAAKILRTLMGHKASISS 110
Query: 103 VSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSEN 162
+ FH + +L SGS D ++L+D+R + + +T++VR + F+P + AS S++
Sbjct: 111 LDFHPM-GEYLASGSVDSNIKLWDVRRKGCVFRYKGHTQAVRCLAFSPDGKW-LASASDD 168
Query: 163 GTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
T++ WD+ K +FT+H+ + +HP LA+ S D+T+K+WDL
Sbjct: 169 STVKLWDLIAG-KMITEFTSHTSAVNVVQFHPNEYLLASGSADRTVKLWDL 218
>CGD|CAL0000852 [details] [associations]
symbol:orf19.7629 species:5476 "Candida albicans" [GO:0005840
"ribosome" evidence=IEA] [GO:0097042 "extrinsic to fungal-type
vacuolar membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0035859 "Seh1-associated complex" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001841
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 CGD:CAL0000852
Prosite:PS00518 GO:GO:0005773 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 GO:GO:0016558 EMBL:AACQ01000032 GO:GO:0005053
PANTHER:PTHR22850:SF4 RefSeq:XP_719389.1 ProteinModelPortal:Q5ACL4
GeneID:3639039 KEGG:cal:CaO19.7629 eggNOG:NOG299301 Uniprot:Q5ACL4
Length = 1088
Score = 232 (86.7 bits), Expect = 4.7e-17, Sum P(2) = 4.7e-17
Identities = 60/188 (31%), Positives = 101/188 (53%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVES-NWLISGSQDGTMRLF 125
IATG +NG V ++ + +SK ++DH RT+N + F +ES N L+SGSQDGT++L+
Sbjct: 148 IATGLSNGVVSIYKISPNGQSKVTGKYSDHNRTINSLDF--IESENQLLSGSQDGTIKLW 205
Query: 126 DIRCQESTKIF--HSNTES--VRDVEFNPHSPY----AFASVSENGTIQQWDVRR----- 172
D+R + + +N S +R +++PHS SV ++G + ++D+R
Sbjct: 206 DLRSSSTKPVMTVQANLHSDPIRACQYSPHSAVRNKICVLSVHDSGALCKFDLRTKSGGK 265
Query: 173 ---PEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSL---EYSINTI 226
PEK ++ H+GP + HPE + T RDK I +++ + S + INT
Sbjct: 266 VYSPEK---KWNLHTGPALSLHIHPEKELVVTGGRDKRISIFNYGERQSRNTPQNLINTY 322
Query: 227 ASVSRIKW 234
V +++W
Sbjct: 323 GPVVKVRW 330
Score = 39 (18.8 bits), Expect = 4.7e-17, Sum P(2) = 4.7e-17
Identities = 8/38 (21%), Positives = 18/38 (47%)
Query: 244 SCSLVVDS-SVNVWDIRRPYIPLASFTEHKDVVSGLAW 280
+CS + D ++ ++++ R +IP K + W
Sbjct: 360 ACSYLNDDPTITIYNLGRKFIP-KQIIHSKKPIQNFIW 396
>UNIPROTKB|Q5ACL4 [details] [associations]
symbol:RTC1 "Restriction of telomere capping protein 1"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR025651 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089
PROSITE:PS50294 SMART:SM00184 SMART:SM00320 CGD:CAL0000852
Prosite:PS00518 GO:GO:0005773 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0046872
GO:GO:0008270 GO:GO:0016558 EMBL:AACQ01000032 GO:GO:0005053
PANTHER:PTHR22850:SF4 RefSeq:XP_719389.1 ProteinModelPortal:Q5ACL4
GeneID:3639039 KEGG:cal:CaO19.7629 eggNOG:NOG299301 Uniprot:Q5ACL4
Length = 1088
Score = 232 (86.7 bits), Expect = 4.7e-17, Sum P(2) = 4.7e-17
Identities = 60/188 (31%), Positives = 101/188 (53%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVES-NWLISGSQDGTMRLF 125
IATG +NG V ++ + +SK ++DH RT+N + F +ES N L+SGSQDGT++L+
Sbjct: 148 IATGLSNGVVSIYKISPNGQSKVTGKYSDHNRTINSLDF--IESENQLLSGSQDGTIKLW 205
Query: 126 DIRCQESTKIF--HSNTES--VRDVEFNPHSPY----AFASVSENGTIQQWDVRR----- 172
D+R + + +N S +R +++PHS SV ++G + ++D+R
Sbjct: 206 DLRSSSTKPVMTVQANLHSDPIRACQYSPHSAVRNKICVLSVHDSGALCKFDLRTKSGGK 265
Query: 173 ---PEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSL---EYSINTI 226
PEK ++ H+GP + HPE + T RDK I +++ + S + INT
Sbjct: 266 VYSPEK---KWNLHTGPALSLHIHPEKELVVTGGRDKRISIFNYGERQSRNTPQNLINTY 322
Query: 227 ASVSRIKW 234
V +++W
Sbjct: 323 GPVVKVRW 330
Score = 39 (18.8 bits), Expect = 4.7e-17, Sum P(2) = 4.7e-17
Identities = 8/38 (21%), Positives = 18/38 (47%)
Query: 244 SCSLVVDS-SVNVWDIRRPYIPLASFTEHKDVVSGLAW 280
+CS + D ++ ++++ R +IP K + W
Sbjct: 360 ACSYLNDDPTITIYNLGRKFIP-KQIIHSKKPIQNFIW 396
>UNIPROTKB|Q5ZIU8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 HOGENOM:HOG000008039
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 EMBL:DQ410670
EMBL:AJ720686 IPI:IPI00822740 RefSeq:NP_001025730.1
UniGene:Gga.7972 ProteinModelPortal:Q5ZIU8 GeneID:415631
KEGG:gga:415631 CTD:10300 HOVERGEN:HBG052294 NextBio:20819203
Uniprot:Q5ZIU8
Length = 657
Score = 228 (85.3 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 50/151 (33%), Positives = 87/151 (57%)
Query: 63 EENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTM 122
+E I G+ +G++ VW+L +K R HK + + FH S ++ SGS D +
Sbjct: 74 KEELIVAGSQSGSIRVWDL---EAAKILRTLLGHKANICSLDFHPYGS-FVASGSLDTDI 129
Query: 123 RLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA 182
+L+D+R + + S+T++VR + F+P + AS +++ T++ WD+ K ++FT
Sbjct: 130 KLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAG-KVMFEFTG 187
Query: 183 HSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
HSGP+ ++HP LA+ S D+TI+ WDL
Sbjct: 188 HSGPVNVVEFHPSEYLLASGSSDRTIRFWDL 218
Score = 204 (76.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 49/198 (24%), Positives = 107/198 (54%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ATG + V VW+ +++ H + + E +++GSQ G++R++D
Sbjct: 36 LATGGDDCRVNVWS---VNKPNCVMSLTGHTTPIESLQISAKEE-LIVAGSQSGSIRVWD 91
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ + + + ++ ++F+P+ + AS S + I+ WDVRR + C +++ +H+
Sbjct: 92 LEAAKILRTLLGHKANICSLDFHPYGSFV-ASGSLDTDIKLWDVRR-KGCIFKYKSHTQA 149
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTIASVSRIKWRPQRKFHLASC 245
+ + P+ WLA+A+ D T+K+WDL+ K E++ ++ V+ +++ P ++ LAS
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFTGHS-GPVNVVEFHPS-EYLLASG 207
Query: 246 SLVVDSSVNVWDIRRPYI 263
S D ++ WD+ + ++
Sbjct: 208 SS--DRTIRFWDLEKFHV 223
>UNIPROTKB|Q8NBT0 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0005932 "microtubule basal body" evidence=IDA] [GO:0005814
"centriole" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005932 GO:GO:0030030 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK075289 EMBL:BC007417
EMBL:BC110877 EMBL:BC119692 EMBL:AL117629 IPI:IPI00171440
IPI:IPI00719213 PIR:T17331 RefSeq:NP_001155052.1
RefSeq:NP_001155053.1 RefSeq:NP_056241.3 UniGene:Hs.476306
ProteinModelPortal:Q8NBT0 SMR:Q8NBT0 IntAct:Q8NBT0 DMDM:91207986
PRIDE:Q8NBT0 Ensembl:ENST00000296484 Ensembl:ENST00000394970
GeneID:25886 KEGG:hsa:25886 UCSC:uc003dcu.3 UCSC:uc003dcw.3
GeneCards:GC03M052109 HGNC:HGNC:24488 HPA:HPA040600 MIM:614783
MIM:614813 neXtProt:NX_Q8NBT0 PharmGKB:PA165698089
InParanoid:Q8NBT0 PhylomeDB:Q8NBT0 GenomeRNAi:25886 NextBio:47308
ArrayExpress:Q8NBT0 Bgee:Q8NBT0 CleanEx:HS_WDR51A
Genevestigator:Q8NBT0 GermOnline:ENSG00000164087 Uniprot:Q8NBT0
Length = 407
Score = 222 (83.2 bits), Expect = 2.0e-16, P = 2.0e-16
Identities = 60/235 (25%), Positives = 116/235 (49%)
Query: 62 IEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGT 121
I +A+G+ + ++VW++ SR+ + F HK V V+F + L SGS+D T
Sbjct: 29 INTKQLASGSMDSCLMVWHMKPQSRAYR---FTGHKDAVTCVNFS-PSGHLLASGSRDKT 84
Query: 122 MRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFT 181
+R++ + + +F ++T +VR V F +F + S++ T++ W R +K + +
Sbjct: 85 VRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ-SFVTASDDKTVKVWATHR-QKFLFSLS 142
Query: 182 AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFH 241
H + + P+ + +AS DKT+K+WD S + + V+ + + P
Sbjct: 143 QHINWVRCAKFSPDGRLIVSASDDKTVKLWDKSSRECVHSYCEHGGFVTYVDFHPSGTC- 201
Query: 242 LASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSII 296
+A+ + D++V VWD+R + L + H V+GL++ I +S S +
Sbjct: 202 IAAAGM--DNTVKVWDVRTHRL-LQHYQLHSAAVNGLSFHPSGNYLITASSDSTL 253
Score = 186 (70.5 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 63/272 (23%), Positives = 125/272 (45%)
Query: 52 FSCNDVAWSCIE---ENHI-ATGATNGAVVVWNLGQISRSKQER-VFNDHKRTVNKVSFH 106
F+ + A +C+ H+ A+G+ + V +W + K E VF H TV V F
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW----VPNVKGESTVFRAHTATVRSVHF- 111
Query: 107 YVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQ 166
+ ++ S D T++++ Q+ + VR +F+P S S++ T++
Sbjct: 112 CSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRL-IVSASDDKTVK 170
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE-YSINT 225
WD + +C + + H G + D+HP +A A D T+KVWD+ L+ Y +++
Sbjct: 171 LWD-KSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHS 229
Query: 226 IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQ 285
A+V+ + + P + + + S DS++ + D+ + L + H+ + +A+ +
Sbjct: 230 -AAVNGLSFHPSGNYLITASS---DSTLKILDLMEGRL-LYTLHGHQGPATTVAFSRTGE 284
Query: 286 LFIAS-SRVSIIPRAKNIKIFIASSRVSIIPR 316
F + S ++ N I + V+ +PR
Sbjct: 285 YFASGGSDEQVMVWKSNFDI-VDHGEVTKVPR 315
Score = 143 (55.4 bits), Expect = 4.5e-07, P = 4.5e-07
Identities = 53/188 (28%), Positives = 89/188 (47%)
Query: 90 ERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFN 149
ER F H+ V V F + + L SGS D + ++ ++ Q F + ++V V F+
Sbjct: 12 ERHFKGHRDAVTCVDFS-INTKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 150 PHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIK 209
P S + AS S + T++ W V + F AH+ + + + + TAS DKT+K
Sbjct: 71 P-SGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVK 128
Query: 210 VWDLSIKPSLEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASF 268
VW + L +S++ I V K+ P + + S S D +V +WD + + S+
Sbjct: 129 VWATHRQKFL-FSLSQHINWVRCAKFSPDGRL-IVSAS--DDKTVKLWD-KSSRECVHSY 183
Query: 269 TEHKDVVS 276
EH V+
Sbjct: 184 CEHGGFVT 191
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 46/186 (24%), Positives = 89/186 (47%)
Query: 129 CQESTKI---FHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSG 185
C E + F + ++V V+F+ ++ AS S + + W ++ P+ Y+FT H
Sbjct: 5 CAEDPSLERHFKGHRDAVTCVDFSINTKQ-LASGSMDSCLMVWHMK-PQSRAYRFTGHKD 62
Query: 186 PIFACDWHPEHAWLATASRDKTIKVWDLSIK-PSLEYSINTIASVSRIKWRPQRKFHLAS 244
+ ++ P LA+ SRDKT+++W ++K S + +T A+V + + + + +
Sbjct: 63 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHT-ATVRSVHFCSDGQSFVTA 121
Query: 245 CSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIKI 304
D +V VW R L S ++H + V + D +L +++S K +K+
Sbjct: 122 SD---DKTVKVWATHRQKF-LFSLSQHINWVRCAKFSPDGRLIVSASD------DKTVKL 171
Query: 305 FIASSR 310
+ SSR
Sbjct: 172 WDKSSR 177
>UNIPROTKB|F6UQ08 [details] [associations]
symbol:F6UQ08 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AAEX03001568 Ensembl:ENSCAFT00000013754 OMA:NTEEYNE
Uniprot:F6UQ08
Length = 581
Score = 217 (81.4 bits), Expect = 2.2e-15, P = 2.2e-15
Identities = 49/151 (32%), Positives = 85/151 (56%)
Query: 64 ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFH-YVESNWLISGSQDGTM 122
E I G+ +G++ VW+L +K R HK + + FH Y E ++ SGSQD +
Sbjct: 75 EELIVAGSQSGSIRVWDL---EAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNI 129
Query: 123 RLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA 182
+L+DIR + + ++++VR + F+P + AS +++ T++ WD+ K +F
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAG-KMMSEFPG 187
Query: 183 HSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
H+GP+ ++HP LA+ S D+TI+ WDL
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 212 (79.7 bits), Expect = 9.3e-15, P = 9.3e-15
Identities = 52/195 (26%), Positives = 105/195 (53%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ATG + V +W+ I++ H V V + E +++GSQ G++R++D
Sbjct: 36 LATGGDDCRVNLWS---INKPNCIMSLTGHTSPVESVRLNTPEE-LIVAGSQSGSIRVWD 91
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ + + + ++ ++F+P+ + AS S++ I+ WD+RR + C +++ HS
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR-KGCVFRYRGHSQA 149
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTIASVSRIKWRPQRKFHLASC 245
+ + P+ WLA+A+ D T+K+WDL+ K E+ +T V+ +++ P ++ LAS
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT-GPVNVVEFHPN-EYLLASG 207
Query: 246 SLVVDSSVNVWDIRR 260
S D ++ WD+ +
Sbjct: 208 SS--DRTIRFWDLEK 220
>UNIPROTKB|H3BPK1 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0010942 "positive
regulation of cell death" evidence=IEA] [GO:0010976 "positive
regulation of neuron projection development" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth cone"
evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005813 GO:GO:0010976 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0051013 EMBL:AC018552
EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845 HGNC:HGNC:6217
Ensembl:ENST00000562592 Bgee:H3BPK1 Uniprot:H3BPK1
Length = 210
Score = 196 (74.1 bits), Expect = 2.4e-15, P = 2.4e-15
Identities = 49/181 (27%), Positives = 98/181 (54%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ATG + V +W+ I++ H V V + E +++GSQ G++R++D
Sbjct: 36 LATGGDDCRVNLWS---INKPNCIMSLTGHTSPVESVRLNTPEE-LIVAGSQSGSIRVWD 91
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ + + + ++ ++F+P+ + AS S++ I+ WD+RR + C +++ HS
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR-KGCVFRYRGHSQA 149
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTIASVSRIKWRPQRKFHLASC 245
+ + P+ WLA+A+ D T+K+WDL+ K E+ +T V+ +++ P ++ LAS
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT-GPVNVVEFHPN-EYLLASG 207
Query: 246 S 246
S
Sbjct: 208 S 208
Score = 184 (69.8 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 44/143 (30%), Positives = 78/143 (54%)
Query: 64 ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFH-YVESNWLISGSQDGTM 122
E I G+ +G++ VW+L +K R HK + + FH Y E ++ SGSQD +
Sbjct: 75 EELIVAGSQSGSIRVWDL---EAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNI 129
Query: 123 RLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA 182
+L+DIR + + ++++VR + F+P + AS +++ T++ WD+ K +F
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAG-KMMSEFPG 187
Query: 183 HSGPIFACDWHPEHAWLATASRD 205
H+GP+ ++HP LA+ S D
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSD 210
Score = 117 (46.2 bits), Expect = 7.7e-05, P = 7.7e-05
Identities = 34/154 (22%), Positives = 70/154 (45%)
Query: 138 SNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHA 197
++ +V + S A+ ++ + W + +P C T H+ P+ + +
Sbjct: 18 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLNTPEE 76
Query: 198 WLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWD 257
+ S+ +I+VWDL L + A++ + + P +F +AS S D+++ +WD
Sbjct: 77 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF-VASGSQ--DTNIKLWD 133
Query: 258 IRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
IRR + + H V L + D + ++AS+
Sbjct: 134 IRRKGC-VFRYRGHSQAVRCLRFSPDGK-WLASA 165
>UNIPROTKB|F1SIZ2 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:CU914695
ProteinModelPortal:F1SIZ2 Ensembl:ENSSSCT00000012506 Uniprot:F1SIZ2
Length = 367
Score = 212 (79.7 bits), Expect = 2.5e-15, P = 2.5e-15
Identities = 59/244 (24%), Positives = 120/244 (49%)
Query: 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNW 112
+C D +++ +A+G+ + ++VW++ SR+ + F HK V V+F +
Sbjct: 54 TCVDFSFNM---KQLASGSMDSCLMVWHMKPQSRAYR---FTGHKDAVTCVNFS-PSGHL 106
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR 172
L SGS+D T+R++ + + +F ++T +VR V F +F + S++ TI+ W R
Sbjct: 107 LASGSRDKTVRIWVPNIKGESTVFRAHTATVRSVHFCSDGQ-SFVTASDDKTIKVWSTHR 165
Query: 173 PEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRI 232
+K + + H + + P+ + +AS DKT+K+WD + + + V+ +
Sbjct: 166 -QKFLFSLSQHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYV 224
Query: 233 KWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSR 292
+ P +A+ + D++V VWD+R + L + H V+ L++ + +S
Sbjct: 225 DFHPSGTC-VAAAGM--DNTVKVWDVRTHRL-LQHYQLHSAAVNALSFHPSGNYLVTASS 280
Query: 293 VSII 296
S +
Sbjct: 281 DSTL 284
Score = 182 (69.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 53/213 (24%), Positives = 102/213 (47%)
Query: 52 FSCNDVAWSCIE---ENHI-ATGATNGAVVVWNLGQISRSKQER-VFNDHKRTVNKVSFH 106
F+ + A +C+ H+ A+G+ + V +W + K E VF H TV V F
Sbjct: 88 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW----VPNIKGESTVFRAHTATVRSVHF- 142
Query: 107 YVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQ 166
+ ++ S D T++++ Q+ + VR +F+P S S++ T++
Sbjct: 143 CSDGQSFVTASDDKTIKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRL-IVSASDDKTVK 201
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE-YSINT 225
WD + +C + + H G + D+HP +A A D T+KVWD+ L+ Y +++
Sbjct: 202 LWD-KTSRECVHSYCEHGGFVTYVDFHPSGTCVAAAGMDNTVKVWDVRTHRLLQHYQLHS 260
Query: 226 IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A+V+ + + P + + + S DS++ + D+
Sbjct: 261 -AAVNALSFHPSGNYLVTASS---DSTLKILDL 289
Score = 143 (55.4 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 54/188 (28%), Positives = 88/188 (46%)
Query: 90 ERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFN 149
ER F H+ V V F + L SGS D + ++ ++ Q F + ++V V F+
Sbjct: 43 ERHFKGHRDAVTCVDFSF-NMKQLASGSMDSCLMVWHMKPQSRAYRFTGHKDAVTCVNFS 101
Query: 150 PHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIK 209
P S + AS S + T++ W V + F AH+ + + + + TAS DKTIK
Sbjct: 102 P-SGHLLASGSRDKTVRIW-VPNIKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTIK 159
Query: 210 VWDLSIKPSLEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASF 268
VW + L +S++ I V K+ P + + S S D +V +WD + + S+
Sbjct: 160 VWSTHRQKFL-FSLSQHINWVRCAKFSPDGRL-IVSAS--DDKTVKLWD-KTSRECVHSY 214
Query: 269 TEHKDVVS 276
EH V+
Sbjct: 215 CEHGGFVT 222
Score = 128 (50.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 39/157 (24%), Positives = 77/157 (49%)
Query: 136 FHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE 195
F + ++V V+F+ + AS S + + W ++ P+ Y+FT H + ++ P
Sbjct: 46 FKGHRDAVTCVDFS-FNMKQLASGSMDSCLMVWHMK-PQSRAYRFTGHKDAVTCVNFSPS 103
Query: 196 HAWLATASRDKTIKVWDLSIK-PSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
LA+ SRDKT+++W +IK S + +T A+V + + + + + D ++
Sbjct: 104 GHLLASGSRDKTVRIWVPNIKGESTVFRAHT-ATVRSVHFCSDGQSFVTASD---DKTIK 159
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
VW R L S ++H + V + D +L +++S
Sbjct: 160 VWSTHRQKF-LFSLSQHINWVRCAKFSPDGRLIVSAS 195
>UNIPROTKB|E2QTQ5 [details] [associations]
symbol:KATNB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 RefSeq:XP_850865.1
ProteinModelPortal:E2QTQ5 Ensembl:ENSCAFT00000013754 GeneID:612852
KEGG:cfa:612852 NextBio:20898345 Uniprot:E2QTQ5
Length = 655
Score = 217 (81.4 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 49/151 (32%), Positives = 85/151 (56%)
Query: 64 ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFH-YVESNWLISGSQDGTM 122
E I G+ +G++ VW+L +K R HK + + FH Y E ++ SGSQD +
Sbjct: 75 EELIVAGSQSGSIRVWDL---EAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNI 129
Query: 123 RLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA 182
+L+DIR + + ++++VR + F+P + AS +++ T++ WD+ K +F
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAG-KMMSEFPG 187
Query: 183 HSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
H+GP+ ++HP LA+ S D+TI+ WDL
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 212 (79.7 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 52/195 (26%), Positives = 105/195 (53%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ATG + V +W+ I++ H V V + E +++GSQ G++R++D
Sbjct: 36 LATGGDDCRVNLWS---INKPNCIMSLTGHTSPVESVRLNTPEE-LIVAGSQSGSIRVWD 91
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ + + + ++ ++F+P+ + AS S++ I+ WD+RR + C +++ HS
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR-KGCVFRYRGHSQA 149
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTIASVSRIKWRPQRKFHLASC 245
+ + P+ WLA+A+ D T+K+WDL+ K E+ +T V+ +++ P ++ LAS
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT-GPVNVVEFHPN-EYLLASG 207
Query: 246 SLVVDSSVNVWDIRR 260
S D ++ WD+ +
Sbjct: 208 SS--DRTIRFWDLEK 220
Score = 116 (45.9 bits), Expect = 0.00096, P = 0.00096
Identities = 33/111 (29%), Positives = 50/111 (45%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+A+ A + V +W+L + K F H VN V FH E L SGS D T+R +D
Sbjct: 162 LASAADDHTVKLWDL---TAGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWD 217
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCF 177
+ + VR V FNP ++ ++ + W+ PE+CF
Sbjct: 218 LEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE---PERCF 265
>UNIPROTKB|Q9BVA0 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0005874 "microtubule"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0010942 "positive regulation of cell death" evidence=IEA]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IEA] [GO:0030424 "axon" evidence=IEA] [GO:0030426 "growth
cone" evidence=IEA] [GO:0030496 "midbody" evidence=IEA] [GO:0043025
"neuronal cell body" evidence=IEA] [GO:0045502 "dynein binding"
evidence=IEA] [GO:0051013 "microtubule severing" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=NAS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IDA] [GO:0000922 "spindle pole" evidence=IDA]
[GO:0006605 "protein targeting" evidence=NAS] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IMP]
[GO:0008352 "katanin complex" evidence=IDA;TAS] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 GO:GO:0006605 GO:GO:0010976
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030426
GO:GO:0010942 GO:GO:0030496 GO:GO:0008017 EMBL:CH471092
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874 GO:GO:0007026
EMBL:AC092118 HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022
PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV
EMBL:AF052432 EMBL:BT007022 EMBL:CR456762 EMBL:BC001353
IPI:IPI00746256 RefSeq:NP_005877.2 UniGene:Hs.275675
UniGene:Hs.732486 ProteinModelPortal:Q9BVA0 SMR:Q9BVA0
STRING:Q9BVA0 PhosphoSite:Q9BVA0 DMDM:60390213 PaxDb:Q9BVA0
PRIDE:Q9BVA0 DNASU:10300 Ensembl:ENST00000379661 GeneID:10300
KEGG:hsa:10300 UCSC:uc002eml.1 GeneCards:GC16P057770 HGNC:HGNC:6217
HPA:HPA041165 HPA:HPA041839 MIM:602703 neXtProt:NX_Q9BVA0
PharmGKB:PA30018 InParanoid:Q9BVA0 OMA:NAISRTP PhylomeDB:Q9BVA0
GenomeRNAi:10300 NextBio:39044 Bgee:Q9BVA0 CleanEx:HS_KATNB1
Genevestigator:Q9BVA0 GermOnline:ENSG00000140854 GO:GO:0031117
Uniprot:Q9BVA0
Length = 655
Score = 217 (81.4 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 49/151 (32%), Positives = 85/151 (56%)
Query: 64 ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFH-YVESNWLISGSQDGTM 122
E I G+ +G++ VW+L +K R HK + + FH Y E ++ SGSQD +
Sbjct: 75 EELIVAGSQSGSIRVWDL---EAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNI 129
Query: 123 RLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA 182
+L+DIR + + ++++VR + F+P + AS +++ T++ WD+ K +F
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAG-KMMSEFPG 187
Query: 183 HSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
H+GP+ ++HP LA+ S D+TI+ WDL
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 212 (79.7 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 52/195 (26%), Positives = 105/195 (53%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ATG + V +W+ I++ H V V + E +++GSQ G++R++D
Sbjct: 36 LATGGDDCRVNLWS---INKPNCIMSLTGHTSPVESVRLNTPEE-LIVAGSQSGSIRVWD 91
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ + + + ++ ++F+P+ + AS S++ I+ WD+RR + C +++ HS
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR-KGCVFRYRGHSQA 149
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTIASVSRIKWRPQRKFHLASC 245
+ + P+ WLA+A+ D T+K+WDL+ K E+ +T V+ +++ P ++ LAS
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT-GPVNVVEFHPN-EYLLASG 207
Query: 246 SLVVDSSVNVWDIRR 260
S D ++ WD+ +
Sbjct: 208 SS--DRTIRFWDLEK 220
Score = 116 (45.9 bits), Expect = 0.00096, P = 0.00096
Identities = 33/111 (29%), Positives = 50/111 (45%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+A+ A + V +W+L + K F H VN V FH E L SGS D T+R +D
Sbjct: 162 LASAADDHTVKLWDL---TAGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWD 217
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCF 177
+ + VR V FNP ++ ++ + W+ PE+CF
Sbjct: 218 LEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE---PERCF 265
>RGD|1311256 [details] [associations]
symbol:Katnb1 "katanin p80 (WD repeat containing) subunit B 1"
species:10116 "Rattus norvegicus" [GO:0000922 "spindle pole"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0007026 "negative regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=IEA;ISO] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA;ISO]
[GO:0010942 "positive regulation of cell death" evidence=IMP]
[GO:0010976 "positive regulation of neuron projection development"
evidence=IDA] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=IDA] [GO:0030496 "midbody" evidence=IDA] [GO:0031117
"positive regulation of microtubule depolymerization"
evidence=IEA;ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0045502 "dynein binding" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0051013
"microtubule severing" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1311256 GO:GO:0005886 GO:GO:0005813 GO:GO:0010976
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030426 GO:GO:0010942 GO:GO:0030496
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 HOGENOM:HOG000008039
GO:GO:0008352 PANTHER:PTHR19845 CTD:10300 HOVERGEN:HBG052294
OMA:NAISRTP GO:GO:0031117 EMBL:CH474006 EMBL:AY953248
IPI:IPI00363482 RefSeq:NP_001019917.1 UniGene:Rn.22157
STRING:Q4VFZ4 Ensembl:ENSRNOT00000019770 GeneID:291852
KEGG:rno:291852 UCSC:RGD:1311256 InParanoid:Q4VFZ4 NextBio:633288
Genevestigator:Q4VFZ4 Uniprot:Q4VFZ4
Length = 655
Score = 217 (81.4 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 49/151 (32%), Positives = 85/151 (56%)
Query: 64 ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFH-YVESNWLISGSQDGTM 122
E I G+ +G++ VW+L +K R HK + + FH Y E ++ SGSQD +
Sbjct: 75 EELIVAGSQSGSIRVWDL---EAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNI 129
Query: 123 RLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA 182
+L+DIR + + ++++VR + F+P + AS +++ T++ WD+ K +F
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAG-KMMSEFPG 187
Query: 183 HSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
H+GP+ ++HP LA+ S D+TI+ WDL
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 212 (79.7 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 52/195 (26%), Positives = 105/195 (53%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ATG + V +W+ I++ H V V + E +++GSQ G++R++D
Sbjct: 36 LATGGDDCRVNLWS---INKPNCIMSLTGHTSPVESVRLNTPEE-LIVAGSQSGSIRVWD 91
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ + + + ++ ++F+P+ + AS S++ I+ WD+RR + C +++ HS
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR-KGCVFRYRGHSQA 149
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTIASVSRIKWRPQRKFHLASC 245
+ + P+ WLA+A+ D T+K+WDL+ K E+ +T V+ +++ P ++ LAS
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT-GPVNVVEFHPN-EYLLASG 207
Query: 246 SLVVDSSVNVWDIRR 260
S D ++ WD+ +
Sbjct: 208 SS--DRTIRFWDLEK 220
Score = 116 (45.9 bits), Expect = 0.00096, P = 0.00096
Identities = 33/111 (29%), Positives = 50/111 (45%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+A+ A + V +W+L + K F H VN V FH E L SGS D T+R +D
Sbjct: 162 LASAADDHTVKLWDL---TAGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWD 217
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCF 177
+ + VR V FNP ++ ++ + W+ PE+CF
Sbjct: 218 LEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE---PERCF 265
>MGI|MGI:1921437 [details] [associations]
symbol:Katnb1 "katanin p80 (WD40-containing) subunit B 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
"centrosome" evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0008352 "katanin complex" evidence=ISO] [GO:0010942 "positive
regulation of cell death" evidence=ISO] [GO:0010976 "positive
regulation of neuron projection development" evidence=ISO]
[GO:0030424 "axon" evidence=ISO;IDA] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030496 "midbody" evidence=ISO] [GO:0031117
"positive regulation of microtubule depolymerization" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=ISO] [GO:0045502 "dynein
binding" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051013 "microtubule severing"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1921437 GO:GO:0005886 GO:GO:0005813
GO:GO:0010976 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424
GO:GO:0043025 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0030426 GO:GO:0010942 GO:GO:0030496 GO:GO:0008568
GO:GO:0051013 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0045502
HOGENOM:HOG000008039 GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845
CTD:10300 HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP
GO:GO:0031117 EMBL:AK010364 EMBL:AK031630 EMBL:AK034103
EMBL:AK049345 EMBL:AK087973 EMBL:BC024500 EMBL:BC045200
IPI:IPI00221459 RefSeq:NP_083081.2 UniGene:Mm.28382
ProteinModelPortal:Q8BG40 SMR:Q8BG40 STRING:Q8BG40
PhosphoSite:Q8BG40 PaxDb:Q8BG40 PRIDE:Q8BG40
Ensembl:ENSMUST00000034239 GeneID:74187 KEGG:mmu:74187
UCSC:uc009mxt.1 InParanoid:Q8BG40 NextBio:340036 Bgee:Q8BG40
CleanEx:MM_KATNB1 Genevestigator:Q8BG40
GermOnline:ENSMUSG00000031787 Uniprot:Q8BG40
Length = 658
Score = 217 (81.4 bits), Expect = 2.8e-15, P = 2.8e-15
Identities = 49/151 (32%), Positives = 85/151 (56%)
Query: 64 ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFH-YVESNWLISGSQDGTM 122
E I G+ +G++ VW+L +K R HK + + FH Y E ++ SGSQD +
Sbjct: 75 EELIVAGSQSGSIRVWDL---EAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNI 129
Query: 123 RLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA 182
+L+DIR + + ++++VR + F+P + AS +++ T++ WD+ K +F
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAG-KMMSEFPG 187
Query: 183 HSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
H+GP+ ++HP LA+ S D+TI+ WDL
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 212 (79.7 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 52/195 (26%), Positives = 105/195 (53%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ATG + V +W+ I++ H V V + E +++GSQ G++R++D
Sbjct: 36 LATGGDDCRVNLWS---INKPNCIMSLTGHTSPVESVRLNTPEE-LIVAGSQSGSIRVWD 91
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ + + + ++ ++F+P+ + AS S++ I+ WD+RR + C +++ HS
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR-KGCVFRYRGHSQA 149
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTIASVSRIKWRPQRKFHLASC 245
+ + P+ WLA+A+ D T+K+WDL+ K E+ +T V+ +++ P ++ LAS
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT-GPVNVVEFHPN-EYLLASG 207
Query: 246 SLVVDSSVNVWDIRR 260
S D ++ WD+ +
Sbjct: 208 SS--DRTIRFWDLEK 220
Score = 116 (45.9 bits), Expect = 0.00097, P = 0.00097
Identities = 33/111 (29%), Positives = 50/111 (45%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+A+ A + V +W+L + K F H VN V FH E L SGS D T+R +D
Sbjct: 162 LASAADDHTVKLWDL---TAGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWD 217
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCF 177
+ + VR V FNP ++ ++ + W+ PE+CF
Sbjct: 218 LEKFQVVSCIEGEPGPVRSVLFNPDGCCLYSGCQDSLRVYGWE---PERCF 265
>UNIPROTKB|A6QQU1 [details] [associations]
symbol:KATNB1 "KATNB1 protein" species:9913 "Bos taurus"
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045502 "dynein binding" evidence=IEA] [GO:0031117 "positive
regulation of microtubule depolymerization" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005886 GO:GO:0005813 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008568 GO:GO:0051013
GO:GO:0000922 GeneTree:ENSGT00700000104017 GO:GO:0007026
HOGENOM:HOG000008039 GO:GO:0008352 PANTHER:PTHR19845 CTD:10300
HOVERGEN:HBG052294 OrthoDB:EOG470TGV OMA:NAISRTP GO:GO:0031117
EMBL:DAAA02046527 EMBL:BC149991 IPI:IPI00867365
RefSeq:NP_001095379.1 UniGene:Bt.3402 Ensembl:ENSBTAT00000053556
GeneID:508813 KEGG:bta:508813 InParanoid:A6QQU1 NextBio:20868691
Uniprot:A6QQU1
Length = 663
Score = 217 (81.4 bits), Expect = 2.9e-15, P = 2.9e-15
Identities = 49/151 (32%), Positives = 85/151 (56%)
Query: 64 ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFH-YVESNWLISGSQDGTM 122
E I G+ +G++ VW+L +K R HK + + FH Y E ++ SGSQD +
Sbjct: 75 EELIVAGSQSGSIRVWDL---EAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNI 129
Query: 123 RLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA 182
+L+DIR + + ++++VR + F+P + AS +++ T++ WD+ K +F
Sbjct: 130 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAG-KMMSEFPG 187
Query: 183 HSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
H+GP+ ++HP LA+ S D+TI+ WDL
Sbjct: 188 HTGPVNVVEFHPNEYLLASGSSDRTIRFWDL 218
Score = 212 (79.7 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 52/195 (26%), Positives = 105/195 (53%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ATG + V +W+ I++ H V V + E +++GSQ G++R++D
Sbjct: 36 LATGGDDCRVNLWS---INKPNCIMSLTGHTSPVESVRLNTPEE-LIVAGSQSGSIRVWD 91
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ + + + ++ ++F+P+ + AS S++ I+ WD+RR + C +++ HS
Sbjct: 92 LEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR-KGCVFRYRGHSQA 149
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTIASVSRIKWRPQRKFHLASC 245
+ + P+ WLA+A+ D T+K+WDL+ K E+ +T V+ +++ P ++ LAS
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT-GPVNVVEFHPN-EYLLASG 207
Query: 246 SLVVDSSVNVWDIRR 260
S D ++ WD+ +
Sbjct: 208 SS--DRTIRFWDLEK 220
Score = 121 (47.7 bits), Expect = 0.00027, P = 0.00027
Identities = 34/121 (28%), Positives = 53/121 (43%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+A+ A + V +W+L + K F H VN V FH E L SGS D T+R +D
Sbjct: 162 LASAADDHTVKLWDL---TAGKMMSEFPGHTGPVNVVEFHPNEY-LLASGSSDRTIRFWD 217
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ + VR + FNP ++ ++ + W+ PE+CF H G
Sbjct: 218 LEKFQVVSCIEGEPGPVRSILFNPDGCCLYSGCQDSLRVYGWE---PERCFDVVLVHWGK 274
Query: 187 I 187
+
Sbjct: 275 V 275
>MGI|MGI:1917485 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030030 "cell projection
organization" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1917485 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 CTD:25886 HOVERGEN:HBG057502 KO:K16482
OMA:ANHVEFH OrthoDB:EOG412M5H EMBL:AK154163 EMBL:AK011064
EMBL:BC034901 IPI:IPI00318396 IPI:IPI00323477 IPI:IPI00742304
RefSeq:NP_081630.2 UniGene:Mm.23054 ProteinModelPortal:Q8JZX3
SMR:Q8JZX3 PRIDE:Q8JZX3 Ensembl:ENSMUST00000072206 GeneID:70235
KEGG:mmu:70235 UCSC:uc009rjk.2 UCSC:uc009rjl.2 HOGENOM:HOG000036743
InParanoid:Q8JZX3 NextBio:331220 Bgee:Q8JZX3 CleanEx:MM_WDR51A
Genevestigator:Q8JZX3 GermOnline:ENSMUSG00000023345 Uniprot:Q8JZX3
Length = 405
Score = 212 (79.7 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 56/235 (23%), Positives = 114/235 (48%)
Query: 62 IEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGT 121
+ H+A+G+ + +++W++ SR+ + F HK V V+F + L SGS+D T
Sbjct: 29 LNTKHLASGSMDSTLMIWHMKPQSRAYR---FTGHKDAVTCVNFS-PSGHLLASGSRDKT 84
Query: 122 MRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFT 181
+R++ + + +F ++T +VR V F + + S++ T++ W R ++ + T
Sbjct: 85 VRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ-SLVTASDDKTVKVWSTHR-QRFLFSLT 142
Query: 182 AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFH 241
H + + P+ + +AS DKT+K+WD + + + V+ + + P
Sbjct: 143 QHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECIHSYCEHGGFVTYVDFHPSGTC- 201
Query: 242 LASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSII 296
+A+ + D++V VWD R + L + H V+ L++ I +S S +
Sbjct: 202 IAAAGM--DNTVKVWDARTHRL-LQHYQLHSAAVNALSFHPSGNYLITASSDSTL 253
Score = 185 (70.2 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 54/213 (25%), Positives = 101/213 (47%)
Query: 52 FSCNDVAWSCIE---ENHI-ATGATNGAVVVWNLGQISRSKQER-VFNDHKRTVNKVSFH 106
F+ + A +C+ H+ A+G+ + V +W + K E VF H TV V F
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW----VPNVKGESTVFRAHTATVRSVHF- 111
Query: 107 YVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQ 166
+ L++ S D T++++ Q + VR +F+P S S++ T++
Sbjct: 112 CSDGQSLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRL-IVSASDDKTVK 170
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE-YSINT 225
WD + +C + + H G + D+HP +A A D T+KVWD L+ Y +++
Sbjct: 171 LWD-KTSRECIHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDARTHRLLQHYQLHS 229
Query: 226 IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A+V+ + + P + + + S DS++ + D+
Sbjct: 230 -AAVNALSFHPSGNYLITASS---DSTLKILDL 258
Score = 153 (58.9 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 54/187 (28%), Positives = 87/187 (46%)
Query: 90 ERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFN 149
ER F H+ V V F + + L SGS D T+ ++ ++ Q F + ++V V F+
Sbjct: 12 ERHFKGHRDAVTCVDFS-LNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 150 PHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIK 209
P S + AS S + T++ W V + F AH+ + + + + L TAS DKT+K
Sbjct: 71 P-SGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVK 128
Query: 210 VWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFT 269
VW + L I V K+ P + + S S D +V +WD + + S+
Sbjct: 129 VWSTHRQRFLFSLTQHINWVRCAKFSPDGRL-IVSAS--DDKTVKLWD-KTSRECIHSYC 184
Query: 270 EHKDVVS 276
EH V+
Sbjct: 185 EHGGFVT 191
Score = 142 (55.0 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 43/157 (27%), Positives = 81/157 (51%)
Query: 136 FHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE 195
F + ++V V+F+ ++ + AS S + T+ W ++ P+ Y+FT H + ++ P
Sbjct: 15 FKGHRDAVTCVDFSLNTKH-LASGSMDSTLMIWHMK-PQSRAYRFTGHKDAVTCVNFSPS 72
Query: 196 HAWLATASRDKTIKVWDLSIK-PSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
LA+ SRDKT+++W ++K S + +T A+V + + + L + S D +V
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHT-ATVRSVHFCSDGQ-SLVTAS--DDKTVK 128
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
VW R L S T+H + V + D +L +++S
Sbjct: 129 VWSTHRQRF-LFSLTQHINWVRCAKFSPDGRLIVSAS 164
>RGD|1565004 [details] [associations]
symbol:Poc1a "POC1 centriolar protein homolog A (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1565004 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OrthoDB:EOG412M5H IPI:IPI00763099
ProteinModelPortal:D4ABU4 Ensembl:ENSRNOT00000038166
UCSC:RGD:1565004 ArrayExpress:D4ABU4 Uniprot:D4ABU4
Length = 324
Score = 206 (77.6 bits), Expect = 7.2e-15, P = 7.2e-15
Identities = 55/235 (23%), Positives = 113/235 (48%)
Query: 62 IEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGT 121
+ H+A+G+ + +++W++ SR+ + F HK V V+F + L SGS+D T
Sbjct: 29 LNTKHLASGSMDSTLMIWHMKPQSRAYR---FTGHKDAVTCVNFS-PSGHLLASGSRDKT 84
Query: 122 MRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFT 181
+R++ + + +F ++T +VR V F + S++ T++ W R ++ + T
Sbjct: 85 VRIWVPNVKGESTVFRAHTATVRSVHFCSDGQL-LVTASDDKTVKVWSTHR-QRFLFSLT 142
Query: 182 AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFH 241
H + + P+ + +AS DKT+K+WD + + + V+ + + P
Sbjct: 143 QHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTC- 201
Query: 242 LASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSII 296
+A+ + D++V VWD R + + + H V+ L++ I +S S +
Sbjct: 202 IAAAGM--DNTVKVWDTRTHRL-VQHYQLHSAAVNALSFHPSGNYLITASSDSTL 253
Score = 182 (69.1 bits), Expect = 7.3e-12, P = 7.3e-12
Identities = 53/213 (24%), Positives = 101/213 (47%)
Query: 52 FSCNDVAWSCIE---ENHI-ATGATNGAVVVWNLGQISRSKQER-VFNDHKRTVNKVSFH 106
F+ + A +C+ H+ A+G+ + V +W + K E VF H TV V F
Sbjct: 57 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW----VPNVKGESTVFRAHTATVRSVHF- 111
Query: 107 YVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQ 166
+ L++ S D T++++ Q + VR +F+P S S++ T++
Sbjct: 112 CSDGQLLVTASDDKTVKVWSTHRQRFLFSLTQHINWVRCAKFSPDGRL-IVSASDDKTVK 170
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE-YSINT 225
WD + +C + + H G + D+HP +A A D T+KVWD ++ Y +++
Sbjct: 171 LWD-KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDTRTHRLVQHYQLHS 229
Query: 226 IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A+V+ + + P + + + S DS++ + D+
Sbjct: 230 -AAVNALSFHPSGNYLITASS---DSTLKILDL 258
Score = 153 (58.9 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 54/187 (28%), Positives = 87/187 (46%)
Query: 90 ERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFN 149
ER F H+ V V F + + L SGS D T+ ++ ++ Q F + ++V V F+
Sbjct: 12 ERHFKGHRDAVTCVDFS-LNTKHLASGSMDSTLMIWHMKPQSRAYRFTGHKDAVTCVNFS 70
Query: 150 PHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIK 209
P S + AS S + T++ W V + F AH+ + + + + L TAS DKT+K
Sbjct: 71 P-SGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQLLVTASDDKTVK 128
Query: 210 VWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFT 269
VW + L I V K+ P + + S S D +V +WD + + S+
Sbjct: 129 VWSTHRQRFLFSLTQHINWVRCAKFSPDGRL-IVSAS--DDKTVKLWD-KTSRECVHSYC 184
Query: 270 EHKDVVS 276
EH V+
Sbjct: 185 EHGGFVT 191
Score = 143 (55.4 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 43/157 (27%), Positives = 81/157 (51%)
Query: 136 FHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE 195
F + ++V V+F+ ++ + AS S + T+ W ++ P+ Y+FT H + ++ P
Sbjct: 15 FKGHRDAVTCVDFSLNTKH-LASGSMDSTLMIWHMK-PQSRAYRFTGHKDAVTCVNFSPS 72
Query: 196 HAWLATASRDKTIKVWDLSIK-PSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
LA+ SRDKT+++W ++K S + +T A+V + + + L + S D +V
Sbjct: 73 GHLLASGSRDKTVRIWVPNVKGESTVFRAHT-ATVRSVHFCSDGQL-LVTAS--DDKTVK 128
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
VW R L S T+H + V + D +L +++S
Sbjct: 129 VWSTHRQRF-LFSLTQHINWVRCAKFSPDGRLIVSAS 164
>UNIPROTKB|H3BPD8 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9606 "Homo sapiens" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
EMBL:AC018552 EMBL:AC092118 GO:GO:0008352 PANTHER:PTHR19845
HGNC:HGNC:6217 Ensembl:ENST00000566726 Bgee:H3BPD8 Uniprot:H3BPD8
Length = 208
Score = 191 (72.3 bits), Expect = 9.0e-15, P = 9.0e-15
Identities = 45/171 (26%), Positives = 92/171 (53%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ATG + V +W+ I++ H V V + E +++GSQ G++R++D
Sbjct: 40 LATGGDDCRVNLWS---INKPNCIMSLTGHTSPVESVRLNTPEE-LIVAGSQSGSIRVWD 95
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ + + + ++ ++F+P+ + AS S++ I+ WD+RR + C +++ HS
Sbjct: 96 LEAAKILRTLMGHKANICSLDFHPYGEFV-ASGSQDTNIKLWDIRR-KGCVFRYRGHSQA 153
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTIASVSRIKWRP 236
+ + P+ WLA+A+ D T+K+WDL+ K E+ +T V+ +++ P
Sbjct: 154 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHT-GPVNVVEFHP 203
Score = 170 (64.9 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 40/132 (30%), Positives = 73/132 (55%)
Query: 64 ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFH-YVESNWLISGSQDGTM 122
E I G+ +G++ VW+L +K R HK + + FH Y E ++ SGSQD +
Sbjct: 79 EELIVAGSQSGSIRVWDL---EAAKILRTLMGHKANICSLDFHPYGE--FVASGSQDTNI 133
Query: 123 RLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA 182
+L+DIR + + ++++VR + F+P + AS +++ T++ WD+ K +F
Sbjct: 134 KLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAG-KMMSEFPG 191
Query: 183 HSGPIFACDWHP 194
H+GP+ ++HP
Sbjct: 192 HTGPVNVVEFHP 203
Score = 117 (46.2 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 34/154 (22%), Positives = 70/154 (45%)
Query: 138 SNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHA 197
++ +V + S A+ ++ + W + +P C T H+ P+ + +
Sbjct: 22 AHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPN-CIMSLTGHTSPVESVRLNTPEE 80
Query: 198 WLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWD 257
+ S+ +I+VWDL L + A++ + + P +F +AS S D+++ +WD
Sbjct: 81 LIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEF-VASGSQ--DTNIKLWD 137
Query: 258 IRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
IRR + + H V L + D + ++AS+
Sbjct: 138 IRRKGC-VFRYRGHSQAVRCLRFSPDGK-WLASA 169
>TAIR|locus:2150788 [details] [associations]
symbol:AT5G08390 "AT5G08390" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090
"trichome morphogenesis" evidence=RCA] [GO:0010228 "vegetative to
reproductive phase transition of meristem" evidence=RCA]
[GO:0016926 "protein desumoylation" evidence=RCA] [GO:0042546 "cell
wall biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0050665 "hydrogen peroxide biosynthetic process"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0080008
GO:GO:0008352 PANTHER:PTHR19845 OMA:YWERNDI IPI:IPI00533677
RefSeq:NP_568194.2 UniGene:At.10141 UniGene:At.72630
ProteinModelPortal:F4KB17 SMR:F4KB17 PRIDE:F4KB17
EnsemblPlants:AT5G08390.1 GeneID:830737 KEGG:ath:AT5G08390
Uniprot:F4KB17
Length = 839
Score = 214 (80.4 bits), Expect = 9.9e-15, P = 9.9e-15
Identities = 54/194 (27%), Positives = 88/194 (45%)
Query: 64 ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMR 123
E +A GA +G + +W+L + +K R H+ V+FH + SGS D ++
Sbjct: 71 EGLVAAGAASGTIKLWDLEE---AKVVRTLTGHRSNCVSVNFHPF-GEFFASGSLDTNLK 126
Query: 124 LFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAH 183
++DIR + + +T V + F P + S E+ ++ WD+ K ++F +H
Sbjct: 127 IWDIRKKGCIHTYKGHTRGVNVLRFTPDGRW-IVSGGEDNVVKVWDLTAG-KLLHEFKSH 184
Query: 184 SGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLA 243
G I + D+HP LAT S DKT+K WDL + V + + P K L
Sbjct: 185 EGKIQSLDFHPHEFLLATGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVL- 243
Query: 244 SCSLVVDSSVNVWD 257
C L + W+
Sbjct: 244 -CGLQESLKIFSWE 256
>UNIPROTKB|E1BQV9 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00594543
ProteinModelPortal:E1BQV9 Ensembl:ENSGALT00000001552
ArrayExpress:E1BQV9 Uniprot:E1BQV9
Length = 660
Score = 212 (79.7 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 49/198 (24%), Positives = 106/198 (53%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ATG + V VW++ Q+ + H + + E +++GSQ G++R++D
Sbjct: 36 LATGGDDCRVNVWSVAQLRHD----LLTGHTTPIESLQISAKEE-LIVAGSQSGSIRVWD 90
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ + + + ++ ++F+P+ + AS S + I+ WDVRR + C +++ +H+
Sbjct: 91 LEAAKILRTLLGHKANICSLDFHPYGSFV-ASGSLDTDIKLWDVRR-KGCIFKYKSHTQA 148
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTIASVSRIKWRPQRKFHLASC 245
+ + P+ WLA+A+ D T+K+WDL+ K E++ V+ +++ P ++ LAS
Sbjct: 149 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFT-GHYGPVNVVEFHPSIEYLLASG 207
Query: 246 SLVVDSSVNVWDIRRPYI 263
S + ++ WD+ + ++
Sbjct: 208 SSSM--TIRFWDLEKFHV 223
Score = 206 (77.6 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 48/152 (31%), Positives = 85/152 (55%)
Query: 63 EENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTM 122
+E I G+ +G++ VW+L +K R HK + + FH S ++ SGS D +
Sbjct: 73 KEELIVAGSQSGSIRVWDL---EAAKILRTLLGHKANICSLDFHPYGS-FVASGSLDTDI 128
Query: 123 RLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA 182
+L+D+R + + S+T++VR + F+P + AS +++ T++ WD+ K ++FT
Sbjct: 129 KLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAG-KVMFEFTG 186
Query: 183 HSGPIFACDWHPEHAWL-ATASRDKTIKVWDL 213
H GP+ ++HP +L A+ S TI+ WDL
Sbjct: 187 HYGPVNVVEFHPSIEYLLASGSSSMTIRFWDL 218
>UNIPROTKB|I3L2U8 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0001667 "ameboidal cell migration" evidence=IEA] [GO:0001675
"acrosome assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0007097 "nuclear migration" evidence=IEA] [GO:0007268 "synaptic
transmission" evidence=IEA] [GO:0007405 "neuroblast proliferation"
evidence=IEA] [GO:0007611 "learning or memory" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008090
"retrograde axon cargo transport" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=IEA] [GO:0017145 "stem cell division"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031512 "motile primary cilium"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0033267 "axon part"
evidence=IEA] [GO:0036035 "osteoclast development" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0045505 "dynein
intermediate chain binding" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0045931 "positive
regulation of mitotic cell cycle" evidence=IEA] [GO:0046329
"negative regulation of JNK cascade" evidence=IEA] [GO:0047496
"vesicle transport along microtubule" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051081 "nuclear envelope disassembly" evidence=IEA]
[GO:0051219 "phosphoprotein binding" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0021766 GO:GO:0001764 GO:GO:0033267 GO:GO:0005871
GO:GO:0031252 GO:GO:0000226 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0030426
GO:GO:0007611 GO:GO:0007405 GO:GO:0008090 GO:GO:0045773
GO:GO:0001675 GO:GO:0005874 GO:GO:0032319 GO:GO:0007097
GO:GO:0021819 GO:GO:0047496 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 GO:GO:0051081
HGNC:HGNC:8574 ChiTaRS:PAFAH1B1 GO:GO:0051660 EMBL:AC015799
EMBL:AC005696 ProteinModelPortal:I3L2U8 SMR:I3L2U8
Ensembl:ENST00000573839 Bgee:I3L2U8 Uniprot:I3L2U8
Length = 345
Score = 205 (77.2 bits), Expect = 1.5e-14, P = 1.5e-14
Identities = 61/202 (30%), Positives = 98/202 (48%)
Query: 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV 143
I R ++ + H+ V +V FH V S ++S S+D T++++D + + +T+SV
Sbjct: 30 IPRPPEKYALSGHRSPVTRVIFHPVFSV-MVSASEDATIKVWDYETGDFERTLKGHTDSV 88
Query: 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS 203
+D+ F+ HS AS S + TI+ WD + E C H + + P + +AS
Sbjct: 89 QDISFD-HSGKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSAS 146
Query: 204 RDKTIKVWDLSIKPSLEYSINTIASVSRIKW----RPQRKFHL-ASCSLVVDSSVNVWDI 258
RDKTIK+W++ Y + T +W RP + L ASCS D +V VW +
Sbjct: 147 RDKTIKMWEVQTG----YCVKTFTG--HREWVRMVRPNQDGTLIASCSN--DQTVRVWVV 198
Query: 259 RRPYIPLASFTEHKDVVSGLAW 280
A EH+ VV ++W
Sbjct: 199 ATKECK-AELREHEHVVECISW 219
Score = 142 (55.0 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 41/174 (23%), Positives = 75/174 (43%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ + + + + VW+ ER H +V +SF + L S S D T++L+D
Sbjct: 58 MVSASEDATIKVWDY---ETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWD 113
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ E + H + +V V P+ + S S + TI+ W+V+ C FT H
Sbjct: 114 FQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGY-CVKTFTGHREW 171
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKF 240
+ + + +A+ S D+T++VW ++ K V I W P+ +
Sbjct: 172 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 225
Score = 131 (51.2 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 34/105 (32%), Positives = 59/105 (56%)
Query: 112 WLISGSQDGTMRLFDIR---CQESTKIFHSNTESVRDVEFNPHSPYAFA-SVSENGTIQQ 167
+L+SGS+D T++++D+ C T + H N VR V F HS F S +++ T++
Sbjct: 245 FLLSGSRDKTIKMWDVSTGMCL-MTLVGHDNW--VRGVLF--HSGGKFILSCADDKTLRV 299
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
WD + ++C AH + + D+H ++ T S D+T+KVW+
Sbjct: 300 WDYKN-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 343
Score = 123 (48.4 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 38/128 (29%), Positives = 61/128 (47%)
Query: 166 QQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINT 225
++W R PEK Y + H P+ +HP + + +AS D TIKVWD E ++
Sbjct: 27 KEWIPRPPEK--YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKG 83
Query: 226 IA-SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDP 284
SV I + K LASCS D ++ +WD + + + + H VS +A +
Sbjct: 84 HTDSVQDISFDHSGKL-LASCS--ADMTIKLWDFQG-FECIRTMHGHDHNVSSVAIMPNG 139
Query: 285 QLFIASSR 292
+++SR
Sbjct: 140 DHIVSASR 147
>UNIPROTKB|Q2TBP4 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9913 "Bos taurus" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0030030
"cell projection organization" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0030030
GeneTree:ENSGT00700000104282 EMBL:BC109862 IPI:IPI00701787
RefSeq:NP_001033649.1 UniGene:Bt.4084 ProteinModelPortal:Q2TBP4
Ensembl:ENSBTAT00000001927 GeneID:534489 KEGG:bta:534489 CTD:25886
HOVERGEN:HBG057502 InParanoid:Q2TBP4 KO:K16482 OMA:ANHVEFH
OrthoDB:EOG412M5H NextBio:20876416 Uniprot:Q2TBP4
Length = 407
Score = 207 (77.9 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 55/235 (23%), Positives = 115/235 (48%)
Query: 62 IEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGT 121
+ +A+G+ + ++VW++ +R+ + F HK V V+F + L SGS+D T
Sbjct: 29 LNTKQLASGSMDSCLMVWHMKPQTRAYR---FAGHKDAVTCVNFS-PSGHLLASGSRDKT 84
Query: 122 MRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFT 181
+R++ + + +F ++T +VR V F +F + S++ T++ W R +K + +
Sbjct: 85 VRIWVPNVKGESTVFRAHTATVRSVHFCSDGQ-SFVTASDDKTVKVWSTHR-QKFLFSLS 142
Query: 182 AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFH 241
H + + P+ + +AS DKT+K+WD + + + V+ + + P
Sbjct: 143 QHINWVRCAKFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTC- 201
Query: 242 LASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSII 296
+A+ + D++V VWD+R + L + H V+ L++ + +S S +
Sbjct: 202 IAAAGM--DNTVKVWDVRTHRL-LQHYQLHSAAVNALSFHPSGNYLVTASSDSTL 253
Score = 183 (69.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 53/213 (24%), Positives = 102/213 (47%)
Query: 52 FSCNDVAWSCIE---ENHI-ATGATNGAVVVWNLGQISRSKQER-VFNDHKRTVNKVSFH 106
F+ + A +C+ H+ A+G+ + V +W + K E VF H TV V F
Sbjct: 57 FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIW----VPNVKGESTVFRAHTATVRSVHF- 111
Query: 107 YVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQ 166
+ ++ S D T++++ Q+ + VR +F+P S S++ T++
Sbjct: 112 CSDGQSFVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCAKFSPDGRL-IVSASDDKTVK 170
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE-YSINT 225
WD + +C + + H G + D+HP +A A D T+KVWD+ L+ Y +++
Sbjct: 171 LWD-KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHS 229
Query: 226 IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A+V+ + + P + + + S DS++ + D+
Sbjct: 230 -AAVNALSFHPSGNYLVTASS---DSTLKILDL 258
Score = 145 (56.1 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 53/188 (28%), Positives = 89/188 (47%)
Query: 90 ERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFN 149
ER F H+ V V F + + L SGS D + ++ ++ Q F + ++V V F+
Sbjct: 12 ERHFKGHRDAVTSVDFS-LNTKQLASGSMDSCLMVWHMKPQTRAYRFAGHKDAVTCVNFS 70
Query: 150 PHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIK 209
P S + AS S + T++ W V + F AH+ + + + + TAS DKT+K
Sbjct: 71 P-SGHLLASGSRDKTVRIW-VPNVKGESTVFRAHTATVRSVHFCSDGQSFVTASDDKTVK 128
Query: 210 VWDLSIKPSLEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASF 268
VW + L +S++ I V K+ P + + S S D +V +WD + + S+
Sbjct: 129 VWSTHRQKFL-FSLSQHINWVRCAKFSPDGRL-IVSAS--DDKTVKLWD-KTSRECVHSY 183
Query: 269 TEHKDVVS 276
EH V+
Sbjct: 184 CEHGGFVT 191
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 40/167 (23%), Positives = 80/167 (47%)
Query: 129 CQESTKI---FHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSG 185
C E + F + ++V V+F+ ++ AS S + + W ++ P+ Y+F H
Sbjct: 5 CPEDPSLERHFKGHRDAVTSVDFSLNTKQ-LASGSMDSCLMVWHMK-PQTRAYRFAGHKD 62
Query: 186 PIFACDWHPEHAWLATASRDKTIKVWDLSIK-PSLEYSINTIASVSRIKWRPQRKFHLAS 244
+ ++ P LA+ SRDKT+++W ++K S + +T A+V + + + + +
Sbjct: 63 AVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHT-ATVRSVHFCSDGQSFVTA 121
Query: 245 CSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
D +V VW R L S ++H + V + D +L +++S
Sbjct: 122 SD---DKTVKVWSTHRQKF-LFSLSQHINWVRCAKFSPDGRLIVSAS 164
>SGD|S000006072 [details] [associations]
symbol:PRP46 "Member of the NineTeen Complex (NTC)"
species:4932 "Saccharomyces cerevisiae" [GO:0005681 "spliceosomal
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IMP] [GO:0000974 "Prp19 complex"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000006072 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005681 GO:GO:0007049
EMBL:BK006949 EMBL:X96770 GO:GO:0000398 GO:GO:0000974
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595 KO:K12862
OMA:ITAEADK OrthoDB:EOG4QZBVP EMBL:Z73507 PIR:S65162
RefSeq:NP_015174.1 ProteinModelPortal:Q12417 SMR:Q12417
DIP:DIP-3994N IntAct:Q12417 MINT:MINT-389419 STRING:Q12417
COMPLUYEAST-2DPAGE:Q12417 PaxDb:Q12417 PeptideAtlas:Q12417
EnsemblFungi:YPL151C GeneID:855952 KEGG:sce:YPL151C CYGD:YPL151c
NextBio:980735 Genevestigator:Q12417 GermOnline:YPL151C
Uniprot:Q12417
Length = 451
Score = 208 (78.3 bits), Expect = 1.6e-14, P = 1.6e-14
Identities = 57/204 (27%), Positives = 96/204 (47%)
Query: 88 KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVE 147
K RV N H V V+ V++ W I+GS D TM+++D+ + + +VRDV
Sbjct: 130 KLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVA 189
Query: 148 FNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKT 207
+ PY F SVSE+ T++ WD+ + + + H + HP +ATA RD
Sbjct: 190 VSDRHPYLF-SVSEDKTVKCWDLEK-NQIIRDYYGHLSGVRTVSIHPTLDLIATAGRDSV 247
Query: 208 IKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLAS 267
IK+WD+ + + + +++++ P + S S D++V +WD+ +
Sbjct: 248 IKLWDMRTRIPVITLVGHKGPINQVQCTPVDP-QVVSSS--TDATVRLWDVVAGKT-MKV 303
Query: 268 FTEHKDVVSGLAWRGDPQLFIASS 291
T HK V A P+ F +S
Sbjct: 304 LTHHKRSVRATALH--PKEFSVAS 325
Score = 147 (56.8 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 52/233 (22%), Positives = 100/233 (42%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
VA ++ TG+ + + VW+L + K + H TV V+ +L S
Sbjct: 145 VAIDPVDNEWFITGSNDTTMKVWDL---ATGKLKTTLAGHVMTVRDVAVSD-RHPYLFSV 200
Query: 117 SQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
S+D T++ +D+ + + ++ + VR V +P A+ + I+ WD+R
Sbjct: 201 SEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLDL-IATAGRDSVIKLWDMRTRIPV 259
Query: 177 FYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRP 236
H GPI P + ++S D T+++WD+ +++ + SV P
Sbjct: 260 I-TLVGHKGPINQVQCTPVDPQVVSSSTDATVRLWDVVAGKTMKVLTHHKRSVRATALHP 318
Query: 237 QRKFHLAS-CSLVVDSSVNVWDIRRPYIPLASFTEHKD-VVSGLAWRGDPQLF 287
++F +AS C+ + W + + L +F K +++ L+ D LF
Sbjct: 319 -KEFSVASACT----DDIRSWGLAEGSL-LTNFESEKTGIINTLSINQDDVLF 365
>TAIR|locus:2060560 [details] [associations]
symbol:LIS "AT2G41500" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS;RCA] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA;IMP] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0016607 "nuclear speck" evidence=IDA] [GO:0007267
"cell-cell signaling" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000741 "karyogamy" evidence=RCA] [GO:0006312
"mitotic recombination" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0009909 "regulation of flower development" evidence=RCA]
[GO:0009933 "meristem structural organization" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
"sugar mediated signaling pathway" evidence=RCA] [GO:0010228
"vegetative to reproductive phase transition of meristem"
evidence=RCA] [GO:0010388 "cullin deneddylation" evidence=RCA]
[GO:0016567 "protein ubiquitination" evidence=RCA] [GO:0016571
"histone methylation" evidence=RCA] [GO:0016579 "protein
deubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:CP002685
GenomeReviews:CT485783_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0007267 GO:GO:0005681
EMBL:AC002510 GO:GO:0000398 GO:GO:0001709 EMBL:AC004625
InterPro:IPR027106 PANTHER:PTHR19846 InterPro:IPR014906
Pfam:PF08799 EMBL:BT008700 EMBL:BT020589 EMBL:AK229530
IPI:IPI00545392 PIR:T00806 RefSeq:NP_181681.1 UniGene:At.12395
UniGene:At.42825 ProteinModelPortal:O22212 SMR:O22212 STRING:O22212
PaxDb:O22212 PRIDE:O22212 EnsemblPlants:AT2G41500.1 GeneID:818748
KEGG:ath:AT2G41500 GeneFarm:4669 TAIR:At2g41500
HOGENOM:HOG000157615 InParanoid:O22212 KO:K12662 OMA:CIATVSH
PhylomeDB:O22212 ProtClustDB:CLSN2683778 Genevestigator:O22212
GermOnline:AT2G41500 GO:GO:0009560 Uniprot:O22212
Length = 554
Score = 209 (78.6 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 68/255 (26%), Positives = 119/255 (46%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNL-GQISRSKQERVFNDHKRTVNKVSFHYVESNWLI 114
DV +S +++ +AT + + +W G + ++ F H + +V+FH +L
Sbjct: 303 DVVFSPVDDC-LATASADRTAKLWKTDGTLLQT-----FEGHLDRLARVAFH-PSGKYLG 355
Query: 115 SGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPE 174
+ S D T RL+DI + ++ SV + F A AS + + WD+R
Sbjct: 356 TTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALA-ASCGLDSLARVWDLRTGR 414
Query: 175 KCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIAS-VSRIK 233
F H P+F+ ++ P LA+ D ++WDL ++ SL Y I A+ VS++K
Sbjct: 415 SILV-FQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSL-YIIPAHANLVSQVK 472
Query: 234 WRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRV 293
+ PQ + LA+ S D VN+W R + + S H+ V+ L D SS +
Sbjct: 473 YEPQEGYFLATASY--DMKVNIWS-GRDFSLVKSLAGHESKVASLDITAD------SSCI 523
Query: 294 SIIPRAKNIKIFIAS 308
+ + + IK++ +S
Sbjct: 524 ATVSHDRTIKLWTSS 538
Score = 161 (61.7 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 54/225 (24%), Positives = 97/225 (43%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+AT + +G +W + Q++ + V DHK V F V+ + L + S D T +L+
Sbjct: 270 LATCSLSGVTKLWEMPQVTNTIA--VLKDHKERATDVVFSPVD-DCLATASADRTAKLWK 326
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ F + + + V F+P Y + S + T + WD+ + Q HS
Sbjct: 327 TD-GTLLQTFEGHLDRLARVAFHPSGKY-LGTTSYDKTWRLWDINTGAELLLQ-EGHSRS 383
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCS 246
++ + + A A+ D +VWDL S+ I V + + P +HLAS
Sbjct: 384 VYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNG-YHLASGG 442
Query: 247 LVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
D+ +WD+R L H ++VS + + F+A++
Sbjct: 443 --EDNQCRIWDLRMRK-SLYIIPAHANLVSQVKYEPQEGYFLATA 484
>UNIPROTKB|E2RGD1 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 EMBL:AAEX03012199
ProteinModelPortal:E2RGD1 Ensembl:ENSCAFT00000015650 OMA:IVWGLET
Uniprot:E2RGD1
Length = 406
Score = 206 (77.6 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 56/235 (23%), Positives = 115/235 (48%)
Query: 62 IEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGT 121
+ +A+G+ + ++VW++ SR+ + F HK V V+F + L SGS+D T
Sbjct: 29 LNTKQLASGSMDSCLMVWHMKPQSRAYR---FAGHKDAVTCVNFS-PSGHLLASGSRDKT 84
Query: 122 MRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFT 181
+R++ + + +F ++T +VR V F + + S++ T++ W R +K + +
Sbjct: 85 VRIWIPNVKGESTVFRAHTATVRSVHFCSDGQ-SLVTASDDKTVKVWSTHR-QKFLFSLS 142
Query: 182 AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFH 241
H + + P+ + +AS DKT+K+WD + + + V+ + + P
Sbjct: 143 QHINWVRCARFSPDGRLIVSASDDKTVKLWDKTSRECVHSYCEHGGFVTYVDFHPSGTC- 201
Query: 242 LASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSII 296
+A+ S+ D++V VWD+R + L + H V+ L++ + +S S +
Sbjct: 202 IAAASM--DNTVKVWDVRTHRL-LQHYQLHSAAVNALSFHPSGNYLLTASSDSTL 253
Score = 194 (73.4 bits), Expect = 5.9e-13, P = 5.9e-13
Identities = 57/213 (26%), Positives = 103/213 (48%)
Query: 52 FSCNDVAWSCIE---ENHI-ATGATNGAVVVWNLGQISRSKQER-VFNDHKRTVNKVSFH 106
F+ + A +C+ H+ A+G+ + V +W I K E VF H TV V F
Sbjct: 57 FAGHKDAVTCVNFSPSGHLLASGSRDKTVRIW----IPNVKGESTVFRAHTATVRSVHF- 111
Query: 107 YVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQ 166
+ L++ S D T++++ Q+ + VR F+P S S++ T++
Sbjct: 112 CSDGQSLVTASDDKTVKVWSTHRQKFLFSLSQHINWVRCARFSPDGRL-IVSASDDKTVK 170
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE-YSINT 225
WD + +C + + H G + D+HP +A AS D T+KVWD+ L+ Y +++
Sbjct: 171 LWD-KTSRECVHSYCEHGGFVTYVDFHPSGTCIAAASMDNTVKVWDVRTHRLLQHYQLHS 229
Query: 226 IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A+V+ + + P + L + S DS++ + D+
Sbjct: 230 -AAVNALSFHPSGNYLLTASS---DSTLKILDL 258
Score = 145 (56.1 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 51/188 (27%), Positives = 90/188 (47%)
Query: 90 ERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFN 149
ER F H+ + V F + + L SGS D + ++ ++ Q F + ++V V F+
Sbjct: 12 ERHFKGHRDAITSVDFS-LNTKQLASGSMDSCLMVWHMKPQSRAYRFAGHKDAVTCVNFS 70
Query: 150 PHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIK 209
P S + AS S + T++ W + + F AH+ + + + + L TAS DKT+K
Sbjct: 71 P-SGHLLASGSRDKTVRIW-IPNVKGESTVFRAHTATVRSVHFCSDGQSLVTASDDKTVK 128
Query: 210 VWDLSIKPSLEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASF 268
VW + L +S++ I V ++ P + + S S D +V +WD + + S+
Sbjct: 129 VWSTHRQKFL-FSLSQHINWVRCARFSPDGRL-IVSAS--DDKTVKLWD-KTSRECVHSY 183
Query: 269 TEHKDVVS 276
EH V+
Sbjct: 184 CEHGGFVT 191
Score = 128 (50.1 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 41/167 (24%), Positives = 81/167 (48%)
Query: 129 CQESTKI---FHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSG 185
C E + F + +++ V+F+ ++ AS S + + W ++ P+ Y+F H
Sbjct: 5 CPEDPSLERHFKGHRDAITSVDFSLNTKQ-LASGSMDSCLMVWHMK-PQSRAYRFAGHKD 62
Query: 186 PIFACDWHPEHAWLATASRDKTIKVWDLSIK-PSLEYSINTIASVSRIKWRPQRKFHLAS 244
+ ++ P LA+ SRDKT+++W ++K S + +T A+V + + + L +
Sbjct: 63 AVTCVNFSPSGHLLASGSRDKTVRIWIPNVKGESTVFRAHT-ATVRSVHFCSDGQ-SLVT 120
Query: 245 CSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
S D +V VW R L S ++H + V + D +L +++S
Sbjct: 121 AS--DDKTVKVWSTHRQKF-LFSLSQHINWVRCARFSPDGRLIVSAS 164
>DICTYBASE|DDB_G0295793 [details] [associations]
symbol:DDB_G0295793 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0295793 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:AAFI02000207 KO:K15542 RefSeq:XP_002649088.2
ProteinModelPortal:C7G084 EnsemblProtists:DDB0252613 GeneID:8629212
KEGG:ddi:DDB_G0295793 OMA:APAQYPQ ProtClustDB:CLSZ2735765
Uniprot:C7G084
Length = 657
Score = 210 (79.0 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 57/245 (23%), Positives = 115/245 (46%)
Query: 50 LNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVE 109
+ + N V+W+ E + TG+++G +WN G E + H V + + + E
Sbjct: 124 VKYPINCVSWTP-EGRRLVTGSSSGEFTLWN-GLTFNF--ETILQAHDSAVRSIIWSHNE 179
Query: 110 SNWLISGSQDGTMRLFDIRCQESTKIFHSNTES-VRDVEFNPHSPYAFASVSENGTIQQW 168
+W++SG G ++ + + KIF ++ +S +R + F+P + AS +++ I+ W
Sbjct: 180 -DWMVSGDDSGNIKYWQPN-MNNVKIFKAHEQSKIRGLSFSP-TDLKLASCADDKIIKIW 236
Query: 169 DVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIAS 228
D R + Q H + WHP+ + + + +D IK+WD ++ ++
Sbjct: 237 DFARCTED-NQLVGHGWDVKCVSWHPQKSLIVSGGKDNNIKIWDAKSSQNITTLHGHKST 295
Query: 229 VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRG-DPQLF 287
VS+++W + +++ S D + V+DIR + +F H V+ LA LF
Sbjct: 296 VSKVEWNQNGNWIVSASS---DQLLKVFDIRTMK-EMQTFKGHGKEVTALALHPYHEDLF 351
Query: 288 IASSR 292
++ +
Sbjct: 352 VSGDK 356
Score = 202 (76.2 bits), Expect = 1.9e-13, P = 1.9e-13
Identities = 53/186 (28%), Positives = 89/186 (47%)
Query: 27 KIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISR 86
KI I D N VG ++ C V+W +++ I +G + + +W+ ++
Sbjct: 231 KIIKIWDFARCTEDNQLVGHGWDVK--C--VSWHP-QKSLIVSGGKDNNIKIWD----AK 281
Query: 87 SKQE-RVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRD 145
S Q + HK TV+KV ++ NW++S S D +++FDIR + + F + + V
Sbjct: 282 SSQNITTLHGHKSTVSKVEWNQ-NGNWIVSASSDQLLKVFDIRTMKEMQTFKGHGKEVTA 340
Query: 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRD 205
+ +P+ F S ++G I W V PE +AH +++ WHP LA+ S D
Sbjct: 341 LALHPYHEDLFVSGDKDGKILYWIVGNPEPQAEIHSAHDADVWSLSWHPIGHILASGSND 400
Query: 206 KTIKVW 211
T K W
Sbjct: 401 HTTKFW 406
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 206 (77.6 bits), Expect = 2.5e-14, P = 2.5e-14
Identities = 49/170 (28%), Positives = 82/170 (48%)
Query: 54 CNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVF----NDHKRTVNKVSFHYVE 109
C V W+ + + + +G+ + + W+L + S V + H++ V+ V FHY
Sbjct: 187 CTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRFHYKH 246
Query: 110 SNWLISGSQDGTMRLFDIRCQE-STK---IFHSNTESVRDVEFNPHSPYAFASVSENGTI 165
+ L S S D + + DIR + STK H+++ + V FNPH+ + A+ S + TI
Sbjct: 247 QDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILATCSTDKTI 306
Query: 166 QQWDVRRPEKCFYQFTAHSGPIFACDWHP-EHAWLATASRDKTIKVWDLS 214
WD+R + + H + + P E LA+ S D+ VWDLS
Sbjct: 307 ALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLS 356
Score = 189 (71.6 bits), Expect = 2.6e-12, P = 2.6e-12
Identities = 58/180 (32%), Positives = 91/180 (50%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC---QESTKIF--H--SNTESVRDVEF 148
H + V ++++ L+SGSQD T+ +D+ +S + H S+ + V DV F
Sbjct: 183 HTQPCTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRF 242
Query: 149 NPHSPYAFASVSENGTIQQWDVRRPE---KCFYQFTAHSGPIFACDWHPEHAW-LATASR 204
+ ASVS + + D+RRP+ K AHSGPI + ++P + + LAT S
Sbjct: 243 HYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFILATCST 302
Query: 205 DKTIKVWDLSIKPSLEYSINTIAS----VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
DKTI +WDL +L ++T+ V++I + P + LAS S D VWD+ R
Sbjct: 303 DKTIALWDLR---NLNQRLHTLEGHEDIVTKISFSPHEEPILASTS--ADRRTLVWDLSR 357
Score = 117 (46.2 bits), Expect = 0.00041, P = 0.00041
Identities = 33/140 (23%), Positives = 59/140 (42%)
Query: 87 SKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR-CQESTKIFHSNTESVRD 145
+K R + H ++ V+F+ L + S D T+ L+D+R + + + V
Sbjct: 271 TKPARSVHAHSGPIHSVAFNPHNDFILATCSTDKTIALWDLRNLNQRLHTLEGHEDIVTK 330
Query: 146 VEFNPHSPYAFASVSENGTIQQWDVRR-------------PEKCFYQFTAHSGPIFACDW 192
+ F+PH AS S + WD+ R P + + H+ DW
Sbjct: 331 ISFSPHEEPILASTSADRRTLVWDLSRIGEDQPAEEAQDGPPELLFMHGGHTSCTIDMDW 390
Query: 193 HPEHAW-LATASRDKTIKVW 211
P + W +ATA+ D +++W
Sbjct: 391 CPNYNWTMATAAEDNILQIW 410
>UNIPROTKB|A5D7P3 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOVERGEN:HBG006271
OMA:WVRGLAF InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 IPI:IPI00703460 UniGene:Bt.111460 GO:GO:0051081
EMBL:DAAA02048674 EMBL:DAAA02048675 EMBL:DAAA02048676 EMBL:BC140633
SMR:A5D7P3 STRING:A5D7P3 Ensembl:ENSBTAT00000055329 Uniprot:A5D7P3
Length = 410
Score = 205 (77.2 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 61/202 (30%), Positives = 98/202 (48%)
Query: 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV 143
I R ++ + H+ V +V FH V S ++S S+D T++++D + + +T+SV
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSV-MVSASEDATIKVWDYETGDFERTLKGHTDSV 153
Query: 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS 203
+D+ F+ HS AS S + TI+ WD + E C H + + P + +AS
Sbjct: 154 QDISFD-HSGKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 204 RDKTIKVWDLSIKPSLEYSINTIASVSRIKW----RPQRKFHL-ASCSLVVDSSVNVWDI 258
RDKTIK+W++ Y + T +W RP + L ASCS D +V VW +
Sbjct: 212 RDKTIKMWEVQTG----YCVKTFTG--HREWVRMVRPNQDGTLIASCSN--DQTVRVWVV 263
Query: 259 RRPYIPLASFTEHKDVVSGLAW 280
A EH+ VV ++W
Sbjct: 264 ATKECK-AELREHEHVVECISW 284
Score = 142 (55.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 41/174 (23%), Positives = 75/174 (43%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ + + + + VW+ ER H +V +SF + L S S D T++L+D
Sbjct: 123 MVSASEDATIKVWDY---ETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWD 178
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ E + H + +V V P+ + S S + TI+ W+V+ C FT H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGY-CVKTFTGHREW 236
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKF 240
+ + + +A+ S D+T++VW ++ K V I W P+ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 34/105 (32%), Positives = 59/105 (56%)
Query: 112 WLISGSQDGTMRLFDIR---CQESTKIFHSNTESVRDVEFNPHSPYAFA-SVSENGTIQQ 167
+L+SGS+D T++++D+ C T + H N VR V F HS F S +++ T++
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCL-MTLVGHDNW--VRGVLF--HSGGKFILSCADDKTLRV 364
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
WD + ++C AH + + D+H ++ T S D+T+KVW+
Sbjct: 365 WDYKN-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 45/167 (26%), Positives = 73/167 (43%)
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
IR Q+ S ++ EF P + + ++W R PEK Y + H P
Sbjct: 59 IRLQKKVMELESKLNEAKE-EFTSGGP-----LGQKRDPKEWIPRPPEK--YALSGHRSP 110
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHLASC 245
+ +HP + + +AS D TIKVWD E ++ SV I + K LASC
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSGKL-LASC 168
Query: 246 SLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSR 292
S D ++ +WD + + + + H VS +A + +++SR
Sbjct: 169 S--ADMTIKLWDFQG-FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
>UNIPROTKB|E2QY31 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
CTD:5048 EMBL:AAEX03006704 RefSeq:XP_854482.1
ProteinModelPortal:E2QY31 SMR:E2QY31 PRIDE:E2QY31
Ensembl:ENSCAFT00000030661 GeneID:480656 KEGG:cfa:480656
NextBio:20855646 Uniprot:E2QY31
Length = 410
Score = 205 (77.2 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 61/202 (30%), Positives = 98/202 (48%)
Query: 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV 143
I R ++ + H+ V +V FH V S ++S S+D T++++D + + +T+SV
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSV-MVSASEDATIKVWDYETGDFERTLKGHTDSV 153
Query: 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS 203
+D+ F+ HS AS S + TI+ WD + E C H + + P + +AS
Sbjct: 154 QDISFD-HSGKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 204 RDKTIKVWDLSIKPSLEYSINTIASVSRIKW----RPQRKFHL-ASCSLVVDSSVNVWDI 258
RDKTIK+W++ Y + T +W RP + L ASCS D +V VW +
Sbjct: 212 RDKTIKMWEVQTG----YCVKTFTG--HREWVRMVRPNQDGTLIASCSN--DQTVRVWVV 263
Query: 259 RRPYIPLASFTEHKDVVSGLAW 280
A EH+ VV ++W
Sbjct: 264 ATKECK-AELREHEHVVECISW 284
Score = 142 (55.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 41/174 (23%), Positives = 75/174 (43%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ + + + + VW+ ER H +V +SF + L S S D T++L+D
Sbjct: 123 MVSASEDATIKVWDY---ETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWD 178
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ E + H + +V V P+ + S S + TI+ W+V+ C FT H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGY-CVKTFTGHREW 236
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKF 240
+ + + +A+ S D+T++VW ++ K V I W P+ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 34/105 (32%), Positives = 59/105 (56%)
Query: 112 WLISGSQDGTMRLFDIR---CQESTKIFHSNTESVRDVEFNPHSPYAFA-SVSENGTIQQ 167
+L+SGS+D T++++D+ C T + H N VR V F HS F S +++ T++
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCL-MTLVGHDNW--VRGVLF--HSGGKFILSCADDKTLRV 364
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
WD + ++C AH + + D+H ++ T S D+T+KVW+
Sbjct: 365 WDYKN-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 45/167 (26%), Positives = 73/167 (43%)
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
IR Q+ S ++ EF P + + ++W R PEK Y + H P
Sbjct: 59 IRLQKKVMELESKLNEAKE-EFTSGGP-----LGQKRDPKEWIPRPPEK--YALSGHRSP 110
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHLASC 245
+ +HP + + +AS D TIKVWD E ++ SV I + K LASC
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSGKL-LASC 168
Query: 246 SLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSR 292
S D ++ +WD + + + + H VS +A + +++SR
Sbjct: 169 S--ADMTIKLWDFQG-FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
>UNIPROTKB|J9P388 [details] [associations]
symbol:PAFAH1B1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005737 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 GeneTree:ENSGT00700000104282 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AAEX03006704
Ensembl:ENSCAFT00000046041 Uniprot:J9P388
Length = 410
Score = 205 (77.2 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 61/202 (30%), Positives = 98/202 (48%)
Query: 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV 143
I R ++ + H+ V +V FH V S ++S S+D T++++D + + +T+SV
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSV-MVSASEDATIKVWDYETGDFERTLKGHTDSV 153
Query: 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS 203
+D+ F+ HS AS S + TI+ WD + E C H + + P + +AS
Sbjct: 154 QDISFD-HSGKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 204 RDKTIKVWDLSIKPSLEYSINTIASVSRIKW----RPQRKFHL-ASCSLVVDSSVNVWDI 258
RDKTIK+W++ Y + T +W RP + L ASCS D +V VW +
Sbjct: 212 RDKTIKMWEVQTG----YCVKTFTG--HREWVRMVRPNQDGTLIASCSN--DQTVRVWVV 263
Query: 259 RRPYIPLASFTEHKDVVSGLAW 280
A EH+ VV ++W
Sbjct: 264 ATKECK-AELREHEHVVECISW 284
Score = 142 (55.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 41/174 (23%), Positives = 75/174 (43%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ + + + + VW+ ER H +V +SF + L S S D T++L+D
Sbjct: 123 MVSASEDATIKVWDY---ETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWD 178
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ E + H + +V V P+ + S S + TI+ W+V+ C FT H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGY-CVKTFTGHREW 236
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKF 240
+ + + +A+ S D+T++VW ++ K V I W P+ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 34/105 (32%), Positives = 59/105 (56%)
Query: 112 WLISGSQDGTMRLFDIR---CQESTKIFHSNTESVRDVEFNPHSPYAFA-SVSENGTIQQ 167
+L+SGS+D T++++D+ C T + H N VR V F HS F S +++ T++
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCL-MTLVGHDNW--VRGVLF--HSGGKFILSCADDKTLRV 364
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
WD + ++C AH + + D+H ++ T S D+T+KVW+
Sbjct: 365 WDYKN-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 45/167 (26%), Positives = 73/167 (43%)
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
IR Q+ S ++ EF P + + ++W R PEK Y + H P
Sbjct: 59 IRLQKKVMELESKLNEAKE-EFTSGGP-----LGQKRDPKEWIPRPPEK--YALSGHRSP 110
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHLASC 245
+ +HP + + +AS D TIKVWD E ++ SV I + K LASC
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSGKL-LASC 168
Query: 246 SLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSR 292
S D ++ +WD + + + + H VS +A + +++SR
Sbjct: 169 S--ADMTIKLWDFQG-FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
>UNIPROTKB|P43034 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9606 "Homo sapiens" [GO:0016042 "lipid
catabolic process" evidence=IEA] [GO:0001667 "ameboidal cell
migration" evidence=IEA] [GO:0001961 "positive regulation of
cytokine-mediated signaling pathway" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0009306 "protein secretion" evidence=IEA]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IEA] [GO:0017145 "stem cell division" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031982 "vesicle"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0033267 "axon part" evidence=IEA] [GO:0036035 "osteoclast
development" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0045505 "dynein intermediate chain binding"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
cycle" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0001764 "neuron migration" evidence=ISS;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IMP]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0005875 "microtubule
associated complex" evidence=IDA] [GO:0045502 "dynein binding"
evidence=IDA] [GO:0007017 "microtubule-based process" evidence=IDA]
[GO:0005635 "nuclear envelope" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IMP] [GO:0005813 "centrosome"
evidence=ISS;IDA] [GO:0000086 "G2/M transition of mitotic cell
cycle" evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=ISS;TAS] [GO:0048854 "brain morphogenesis"
evidence=IMP] [GO:0008201 "heparin binding" evidence=ISS]
[GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0021540
"corpus callosum morphogenesis" evidence=IMP] [GO:0021987 "cerebral
cortex development" evidence=IMP] [GO:0050885 "neuromuscular
process controlling balance" evidence=IMP] [GO:0000226 "microtubule
cytoskeleton organization" evidence=ISS] [GO:0007268 "synaptic
transmission" evidence=ISS] [GO:0007405 "neuroblast proliferation"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0008090 "retrograde axon cargo transport" evidence=ISS]
[GO:0019226 "transmission of nerve impulse" evidence=ISS]
[GO:0030036 "actin cytoskeleton organization" evidence=ISS]
[GO:0032319 "regulation of Rho GTPase activity" evidence=ISS]
[GO:0047496 "vesicle transport along microtubule" evidence=ISS]
[GO:0043274 "phospholipase binding" evidence=ISS] [GO:0046469
"platelet activating factor metabolic process" evidence=ISS]
[GO:0034452 "dynactin binding" evidence=ISS] [GO:0001675 "acrosome
assembly" evidence=ISS] [GO:0007611 "learning or memory"
evidence=ISS] [GO:0021766 "hippocampus development" evidence=ISS]
[GO:0021819 "layer formation in cerebral cortex" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0031512 "motile
primary cilium" evidence=ISS] [GO:0031513 "nonmotile primary
cilium" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISS] [GO:0051219 "phosphoprotein binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
EMBL:CH471108 Orphanet:217385 Pathway_Interaction_DB:lis1pathway
Reactome:REACT_115566 GO:GO:0033267 GO:GO:0005871 GO:GO:0000086
GO:GO:0042803 GO:GO:0031252 Reactome:REACT_21300 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0008201 GO:GO:0030426 GO:GO:0007611 GO:GO:0007405
GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773
GO:GO:0001675 GO:GO:0008017 Pathway_Interaction_DB:reelinpathway
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0051219 GO:GO:0000236 GO:GO:0048854 GO:GO:0034452
GO:GO:0021540 GO:GO:0045502 GO:GO:0021819 GO:GO:0047496
GO:GO:0010977 GO:GO:0017145 GO:GO:0031512 GO:GO:0021895
Orphanet:531 HOGENOM:HOG000184015 HOVERGEN:HBG006271 KO:K01062
OMA:WVRGLAF OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0043274
GO:GO:0046469 GO:GO:0051081 EMBL:L13385 EMBL:L13386 EMBL:L13387
EMBL:U72342 EMBL:U72334 EMBL:U72335 EMBL:U72336 EMBL:U72337
EMBL:U72338 EMBL:U72339 EMBL:U72340 EMBL:U72341 EMBL:AF208837
EMBL:AF208838 EMBL:AF400434 EMBL:AK313078 EMBL:BX538346
EMBL:BC064638 IPI:IPI00218728 IPI:IPI00760905 PIR:S36113
RefSeq:NP_000421.1 UniGene:Hs.77318 ProteinModelPortal:P43034
SMR:P43034 DIP:DIP-35691N IntAct:P43034 MINT:MINT-5004233
STRING:P43034 PhosphoSite:P43034 DMDM:1170794 PaxDb:P43034
PeptideAtlas:P43034 PRIDE:P43034 Ensembl:ENST00000397195
GeneID:5048 KEGG:hsa:5048 UCSC:uc002fuw.4 GeneCards:GC17P002496
HGNC:HGNC:8574 HPA:CAB004489 HPA:HPA020036 MIM:247200 MIM:601545
MIM:607432 neXtProt:NX_P43034 Orphanet:95232 PharmGKB:PA32905
InParanoid:P43034 PhylomeDB:P43034 ChiTaRS:PAFAH1B1 GenomeRNAi:5048
NextBio:19452 ArrayExpress:P43034 Bgee:P43034 CleanEx:HS_PAFAH1B1
Genevestigator:P43034 GermOnline:ENSG00000007168 GO:GO:0051660
Uniprot:P43034
Length = 410
Score = 205 (77.2 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 61/202 (30%), Positives = 98/202 (48%)
Query: 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV 143
I R ++ + H+ V +V FH V S ++S S+D T++++D + + +T+SV
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSV-MVSASEDATIKVWDYETGDFERTLKGHTDSV 153
Query: 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS 203
+D+ F+ HS AS S + TI+ WD + E C H + + P + +AS
Sbjct: 154 QDISFD-HSGKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 204 RDKTIKVWDLSIKPSLEYSINTIASVSRIKW----RPQRKFHL-ASCSLVVDSSVNVWDI 258
RDKTIK+W++ Y + T +W RP + L ASCS D +V VW +
Sbjct: 212 RDKTIKMWEVQTG----YCVKTFTG--HREWVRMVRPNQDGTLIASCSN--DQTVRVWVV 263
Query: 259 RRPYIPLASFTEHKDVVSGLAW 280
A EH+ VV ++W
Sbjct: 264 ATKECK-AELREHEHVVECISW 284
Score = 142 (55.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 41/174 (23%), Positives = 75/174 (43%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ + + + + VW+ ER H +V +SF + L S S D T++L+D
Sbjct: 123 MVSASEDATIKVWDY---ETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWD 178
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ E + H + +V V P+ + S S + TI+ W+V+ C FT H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGY-CVKTFTGHREW 236
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKF 240
+ + + +A+ S D+T++VW ++ K V I W P+ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 34/105 (32%), Positives = 59/105 (56%)
Query: 112 WLISGSQDGTMRLFDIR---CQESTKIFHSNTESVRDVEFNPHSPYAFA-SVSENGTIQQ 167
+L+SGS+D T++++D+ C T + H N VR V F HS F S +++ T++
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCL-MTLVGHDNW--VRGVLF--HSGGKFILSCADDKTLRV 364
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
WD + ++C AH + + D+H ++ T S D+T+KVW+
Sbjct: 365 WDYKN-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 45/167 (26%), Positives = 73/167 (43%)
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
IR Q+ S ++ EF P + + ++W R PEK Y + H P
Sbjct: 59 IRLQKKVMELESKLNEAKE-EFTSGGP-----LGQKRDPKEWIPRPPEK--YALSGHRSP 110
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHLASC 245
+ +HP + + +AS D TIKVWD E ++ SV I + K LASC
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSGKL-LASC 168
Query: 246 SLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSR 292
S D ++ +WD + + + + H VS +A + +++SR
Sbjct: 169 S--ADMTIKLWDFQG-FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
>UNIPROTKB|F2Z521 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0051219
"phosphoprotein binding" evidence=IEA] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0048854 "brain
morphogenesis" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0045502 "dynein binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0036035 "osteoclast development" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0031512
"motile primary cilium" evidence=IEA] [GO:0031252 "cell leading
edge" evidence=IEA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0021819 "layer formation in
cerebral cortex" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021540 "corpus callosum
morphogenesis" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0008090 "retrograde axon cargo transport" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0007611
"learning or memory" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001675 "acrosome assembly" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0000235 "astral microtubule" evidence=IEA]
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005938 GO:GO:0000132 GO:GO:0005635 GO:GO:0005813
GO:GO:0048471 GO:GO:0021766 GO:GO:0001764 GO:GO:0005875
GO:GO:0031252 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 GO:GO:0007268 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0001675 GO:GO:0000235 GO:GO:0032319 GO:GO:0031023
GO:GO:0048854 GO:GO:0021540 GO:GO:0021819 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 OMA:WVRGLAF
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
GO:GO:0051081 EMBL:CU469125 ProteinModelPortal:F2Z521 SMR:F2Z521
PRIDE:F2Z521 Ensembl:ENSSSCT00000019411 Uniprot:F2Z521
Length = 410
Score = 205 (77.2 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 61/202 (30%), Positives = 98/202 (48%)
Query: 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV 143
I R ++ + H+ V +V FH V S ++S S+D T++++D + + +T+SV
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSV-MVSASEDATIKVWDYETGDFERTLKGHTDSV 153
Query: 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS 203
+D+ F+ HS AS S + TI+ WD + E C H + + P + +AS
Sbjct: 154 QDISFD-HSGKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 204 RDKTIKVWDLSIKPSLEYSINTIASVSRIKW----RPQRKFHL-ASCSLVVDSSVNVWDI 258
RDKTIK+W++ Y + T +W RP + L ASCS D +V VW +
Sbjct: 212 RDKTIKMWEVQTG----YCVKTFTG--HREWVRMVRPNQDGTLIASCSN--DQTVRVWVV 263
Query: 259 RRPYIPLASFTEHKDVVSGLAW 280
A EH+ VV ++W
Sbjct: 264 ATKECK-AELREHEHVVECISW 284
Score = 142 (55.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 41/174 (23%), Positives = 75/174 (43%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ + + + + VW+ ER H +V +SF + L S S D T++L+D
Sbjct: 123 MVSASEDATIKVWDY---ETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWD 178
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ E + H + +V V P+ + S S + TI+ W+V+ C FT H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGY-CVKTFTGHREW 236
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKF 240
+ + + +A+ S D+T++VW ++ K V I W P+ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 34/105 (32%), Positives = 59/105 (56%)
Query: 112 WLISGSQDGTMRLFDIR---CQESTKIFHSNTESVRDVEFNPHSPYAFA-SVSENGTIQQ 167
+L+SGS+D T++++D+ C T + H N VR V F HS F S +++ T++
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCL-MTLVGHDNW--VRGVLF--HSGGKFILSCADDKTLRV 364
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
WD + ++C AH + + D+H ++ T S D+T+KVW+
Sbjct: 365 WDYKN-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 45/167 (26%), Positives = 73/167 (43%)
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
IR Q+ S ++ EF P + + ++W R PEK Y + H P
Sbjct: 59 IRLQKKVMELESKLNEAKE-EFTSGGP-----LGQKRDPKEWIPRPPEK--YALSGHRSP 110
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHLASC 245
+ +HP + + +AS D TIKVWD E ++ SV I + K LASC
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSGKL-LASC 168
Query: 246 SLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSR 292
S D ++ +WD + + + + H VS +A + +++SR
Sbjct: 169 S--ADMTIKLWDFQG-FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
>MGI|MGI:109520 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10090 "Mus musculus" [GO:0000132
"establishment of mitotic spindle orientation" evidence=ISO]
[GO:0000226 "microtubule cytoskeleton organization"
evidence=IGI;IMP] [GO:0000235 "astral microtubule" evidence=ISO]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0001667 "ameboidal cell
migration" evidence=IMP] [GO:0001675 "acrosome assembly"
evidence=IMP] [GO:0001764 "neuron migration" evidence=ISO;IGI;IMP]
[GO:0001961 "positive regulation of cytokine-mediated signaling
pathway" evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005635 "nuclear envelope"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005871 "kinesin
complex" evidence=ISO] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005875 "microtubule associated complex" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=ISO] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007017 "microtubule-based process" evidence=ISO]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=ISO]
[GO:0007268 "synaptic transmission" evidence=IMP] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0007611 "learning or memory"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISO;IDA]
[GO:0008090 "retrograde axon cargo transport" evidence=IDA]
[GO:0008344 "adult locomotory behavior" evidence=ISO;IMP]
[GO:0009306 "protein secretion" evidence=IMP] [GO:0010977 "negative
regulation of neuron projection development" evidence=ISO]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0016020
"membrane" evidence=IEA] [GO:0016042 "lipid catabolic process"
evidence=IEA] [GO:0016477 "cell migration" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017145 "stem
cell division" evidence=ISO] [GO:0019226 "transmission of nerve
impulse" evidence=IMP] [GO:0021540 "corpus callosum morphogenesis"
evidence=ISO] [GO:0021766 "hippocampus development"
evidence=IGI;IMP] [GO:0021819 "layer formation in cerebral cortex"
evidence=IGI] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=ISO] [GO:0021987 "cerebral cortex development"
evidence=ISO;IGI;IMP] [GO:0030036 "actin cytoskeleton organization"
evidence=IMP] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0030426 "growth cone" evidence=ISO] [GO:0031023 "microtubule
organizing center organization" evidence=ISO] [GO:0031252 "cell
leading edge" evidence=IDA] [GO:0031512 "motile primary cilium"
evidence=IDA] [GO:0031513 "nonmotile primary cilium" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISO] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IMP] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0033267 "axon part" evidence=ISO]
[GO:0036035 "osteoclast development" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0043005
"neuron projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=ISO]
[GO:0045773 "positive regulation of axon extension" evidence=ISO]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=ISO] [GO:0046329 "negative regulation of JNK cascade"
evidence=IGI] [GO:0047496 "vesicle transport along microtubule"
evidence=IGI] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048854 "brain morphogenesis" evidence=ISO]
[GO:0050885 "neuromuscular process controlling balance"
evidence=ISO;IMP] [GO:0051081 "nuclear envelope disassembly"
evidence=IMP] [GO:0051219 "phosphoprotein binding" evidence=IPI]
[GO:0051301 "cell division" evidence=IEA] [GO:0051660
"establishment of centrosome localization" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 MGI:MGI:109520
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0005875 GO:GO:0033267 GO:GO:0005871 GO:GO:0000226
GO:GO:0000776 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036
GO:GO:0045931 GO:GO:0007268 GO:GO:0043025 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344
GO:GO:0050885 GO:GO:0009306 GO:GO:0030426 GO:GO:0007611
GO:GO:0007405 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045773 GO:GO:0001675 GO:GO:0046329 GO:GO:0008017
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0007097
GO:GO:0048854 GO:GO:0021540 GO:GO:0001667 GO:GO:0021819
GO:GO:0047496 GO:GO:0036035 GO:GO:0010977 GO:GO:0017145
GO:GO:0031512 GO:GO:0021895 GO:GO:0001961 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081 ChiTaRS:PAFAH1B1
GO:GO:0051660 EMBL:U95116 EMBL:U95120 EMBL:U95119 EMBL:L25109
EMBL:AY189217 EMBL:AY189218 EMBL:BC014831 EMBL:BC026141
IPI:IPI00227864 IPI:IPI00309207 RefSeq:NP_038653.1
UniGene:Mm.397111 PDB:1UUJ PDB:1VYH PDBsum:1UUJ PDBsum:1VYH
ProteinModelPortal:P63005 SMR:P63005 DIP:DIP-29555N IntAct:P63005
STRING:P63005 PhosphoSite:P63005 REPRODUCTION-2DPAGE:P63005
PaxDb:P63005 PRIDE:P63005 Ensembl:ENSMUST00000021091
Ensembl:ENSMUST00000102520 GeneID:18472 KEGG:mmu:18472
InParanoid:P63005 EvolutionaryTrace:P63005 NextBio:294162
Bgee:P63005 Genevestigator:P63005 GermOnline:ENSMUSG00000020745
Uniprot:P63005
Length = 410
Score = 205 (77.2 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 61/202 (30%), Positives = 98/202 (48%)
Query: 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV 143
I R ++ + H+ V +V FH V S ++S S+D T++++D + + +T+SV
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSV-MVSASEDATIKVWDYETGDFERTLKGHTDSV 153
Query: 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS 203
+D+ F+ HS AS S + TI+ WD + E C H + + P + +AS
Sbjct: 154 QDISFD-HSGKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 204 RDKTIKVWDLSIKPSLEYSINTIASVSRIKW----RPQRKFHL-ASCSLVVDSSVNVWDI 258
RDKTIK+W++ Y + T +W RP + L ASCS D +V VW +
Sbjct: 212 RDKTIKMWEVQTG----YCVKTFTG--HREWVRMVRPNQDGTLIASCSN--DQTVRVWVV 263
Query: 259 RRPYIPLASFTEHKDVVSGLAW 280
A EH+ VV ++W
Sbjct: 264 ATKECK-AELREHEHVVECISW 284
Score = 142 (55.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 41/174 (23%), Positives = 75/174 (43%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ + + + + VW+ ER H +V +SF + L S S D T++L+D
Sbjct: 123 MVSASEDATIKVWDY---ETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWD 178
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ E + H + +V V P+ + S S + TI+ W+V+ C FT H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGY-CVKTFTGHREW 236
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKF 240
+ + + +A+ S D+T++VW ++ K V I W P+ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 34/105 (32%), Positives = 59/105 (56%)
Query: 112 WLISGSQDGTMRLFDIR---CQESTKIFHSNTESVRDVEFNPHSPYAFA-SVSENGTIQQ 167
+L+SGS+D T++++D+ C T + H N VR V F HS F S +++ T++
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCL-MTLVGHDNW--VRGVLF--HSGGKFILSCADDKTLRV 364
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
WD + ++C AH + + D+H ++ T S D+T+KVW+
Sbjct: 365 WDYKN-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 45/167 (26%), Positives = 73/167 (43%)
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
IR Q+ S ++ EF P + + ++W R PEK Y + H P
Sbjct: 59 IRLQKKVMELESKLNEAKE-EFTSGGP-----LGQKRDPKEWIPRPPEK--YALSGHRSP 110
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHLASC 245
+ +HP + + +AS D TIKVWD E ++ SV I + K LASC
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSGKL-LASC 168
Query: 246 SLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSR 292
S D ++ +WD + + + + H VS +A + +++SR
Sbjct: 169 S--ADMTIKLWDFQG-FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
>RGD|620331 [details] [associations]
symbol:Pafah1b1 "platelet-activating factor acetylhydrolase,
isoform 1b, subunit 1" species:10116 "Rattus norvegicus"
[GO:0000132 "establishment of mitotic spindle orientation"
evidence=IEA;ISO] [GO:0000226 "microtubule cytoskeleton
organization" evidence=ISO] [GO:0000235 "astral microtubule"
evidence=IEA;ISO] [GO:0000776 "kinetochore" evidence=IEA;ISO]
[GO:0001667 "ameboidal cell migration" evidence=IEA;ISO]
[GO:0001675 "acrosome assembly" evidence=IEA;ISO] [GO:0001764
"neuron migration" evidence=ISO;IMP] [GO:0001961 "positive
regulation of cytokine-mediated signaling pathway"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005635 "nuclear envelope"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005871 "kinesin complex" evidence=IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=ISO] [GO:0005938 "cell cortex"
evidence=IEA;ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007017
"microtubule-based process" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IMP]
[GO:0007268 "synaptic transmission" evidence=IEA;ISO] [GO:0007405
"neuroblast proliferation" evidence=IEA;ISO] [GO:0007420 "brain
development" evidence=IEP] [GO:0007611 "learning or memory"
evidence=IEA;ISO] [GO:0008017 "microtubule binding"
evidence=IEA;ISO] [GO:0008090 "retrograde axon cargo transport"
evidence=IEA;ISO] [GO:0008344 "adult locomotory behavior"
evidence=IEA;ISO] [GO:0009306 "protein secretion" evidence=IEA;ISO]
[GO:0010977 "negative regulation of neuron projection development"
evidence=IMP] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0016042 "lipid catabolic process" evidence=IEA] [GO:0016477
"cell migration" evidence=ISO] [GO:0017145 "stem cell division"
evidence=IMP] [GO:0019226 "transmission of nerve impulse"
evidence=ISO] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0021819 "layer formation in cerebral cortex"
evidence=IEA;ISO] [GO:0021895 "cerebral cortex neuron
differentiation" evidence=IMP] [GO:0021987 "cerebral cortex
development" evidence=ISO] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA;ISO] [GO:0030426 "growth cone"
evidence=IDA] [GO:0031023 "microtubule organizing center
organization" evidence=IEA;ISO] [GO:0031252 "cell leading edge"
evidence=IEA;ISO] [GO:0031512 "motile primary cilium"
evidence=IEA;ISO] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0032319 "regulation of Rho
GTPase activity" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IPI] [GO:0033267 "axon part" evidence=IDA]
[GO:0036035 "osteoclast development" evidence=IEA;ISO] [GO:0042803
"protein homodimerization activity" evidence=IEA;ISO] [GO:0043005
"neuron projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0045502 "dynein binding" evidence=ISO]
[GO:0045505 "dynein intermediate chain binding" evidence=IDA]
[GO:0045773 "positive regulation of axon extension" evidence=IMP]
[GO:0045931 "positive regulation of mitotic cell cycle"
evidence=IMP] [GO:0046329 "negative regulation of JNK cascade"
evidence=IEA;ISO] [GO:0047179 "platelet-activating factor
acetyltransferase activity" evidence=TAS] [GO:0047496 "vesicle
transport along microtubule" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA;ISO] [GO:0048854
"brain morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA;ISO] [GO:0051081 "nuclear
envelope disassembly" evidence=IEA;ISO] [GO:0051219 "phosphoprotein
binding" evidence=IEA;ISO] [GO:0051301 "cell division"
evidence=IEA] [GO:0051660 "establishment of centrosome
localization" evidence=IMP] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0031513 "nonmotile primary cilium" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:620331
GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 205 (77.2 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 61/202 (30%), Positives = 98/202 (48%)
Query: 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV 143
I R ++ + H+ V +V FH V S ++S S+D T++++D + + +T+SV
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSV-MVSASEDATIKVWDYETGDFERTLKGHTDSV 153
Query: 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS 203
+D+ F+ HS AS S + TI+ WD + E C H + + P + +AS
Sbjct: 154 QDISFD-HSGKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 204 RDKTIKVWDLSIKPSLEYSINTIASVSRIKW----RPQRKFHL-ASCSLVVDSSVNVWDI 258
RDKTIK+W++ Y + T +W RP + L ASCS D +V VW +
Sbjct: 212 RDKTIKMWEVQTG----YCVKTFTG--HREWVRMVRPNQDGTLIASCSN--DQTVRVWVV 263
Query: 259 RRPYIPLASFTEHKDVVSGLAW 280
A EH+ VV ++W
Sbjct: 264 ATKECK-AELREHEHVVECISW 284
Score = 142 (55.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 41/174 (23%), Positives = 75/174 (43%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ + + + + VW+ ER H +V +SF + L S S D T++L+D
Sbjct: 123 MVSASEDATIKVWDY---ETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWD 178
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ E + H + +V V P+ + S S + TI+ W+V+ C FT H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGY-CVKTFTGHREW 236
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKF 240
+ + + +A+ S D+T++VW ++ K V I W P+ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 34/105 (32%), Positives = 59/105 (56%)
Query: 112 WLISGSQDGTMRLFDIR---CQESTKIFHSNTESVRDVEFNPHSPYAFA-SVSENGTIQQ 167
+L+SGS+D T++++D+ C T + H N VR V F HS F S +++ T++
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCL-MTLVGHDNW--VRGVLF--HSGGKFILSCADDKTLRV 364
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
WD + ++C AH + + D+H ++ T S D+T+KVW+
Sbjct: 365 WDYKN-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 45/167 (26%), Positives = 73/167 (43%)
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
IR Q+ S ++ EF P + + ++W R PEK Y + H P
Sbjct: 59 IRLQKKVMELESKLNEAKE-EFTSGGP-----LGQKRDPKEWIPRPPEK--YALSGHRSP 110
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHLASC 245
+ +HP + + +AS D TIKVWD E ++ SV I + K LASC
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSGKL-LASC 168
Query: 246 SLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSR 292
S D ++ +WD + + + + H VS +A + +++SR
Sbjct: 169 S--ADMTIKLWDFQG-FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
>UNIPROTKB|P63004 [details] [associations]
symbol:Pafah1b1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:10116 "Rattus norvegicus" [GO:0007067
"mitosis" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
RGD:620331 GO:GO:0005829 GO:GO:0005938 GO:GO:0000132 GO:GO:0005635
GO:GO:0005813 GO:GO:0048471 GO:GO:0021766 GO:GO:0001764
GO:GO:0033267 GO:GO:0005871 GO:GO:0031252 GO:GO:0000776
GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016042 GO:GO:0030036 GO:GO:0045931
GO:GO:0007268 GO:GO:0043025 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008344 GO:GO:0050885
GO:GO:0030426 GO:GO:0007611 GO:GO:0007405 GO:GO:0008090
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045773 GO:GO:0001675
GO:GO:0000235 GO:GO:0031982 GO:GO:0032319 GO:GO:0031023
GO:GO:0007097 GO:GO:0048854 GO:GO:0021540 GO:GO:0021819
GO:GO:0047496 GO:GO:0010977 GO:GO:0017145 GO:GO:0031512
GO:GO:0021895 GO:GO:0045505 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 GO:GO:0051081
GO:GO:0051660 EMBL:AF016049 EMBL:BC072510 IPI:IPI00231298
RefSeq:NP_113951.1 UniGene:Rn.5827 ProteinModelPortal:P63004
SMR:P63004 IntAct:P63004 STRING:P63004 PhosphoSite:P63004
World-2DPAGE:0004:P63004 PRIDE:P63004 GeneID:83572 KEGG:rno:83572
InParanoid:P63004 NextBio:616071 ArrayExpress:P63004
Genevestigator:P63004 GermOnline:ENSRNOG00000002755 GO:GO:0047179
Uniprot:P63004
Length = 410
Score = 205 (77.2 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 61/202 (30%), Positives = 98/202 (48%)
Query: 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV 143
I R ++ + H+ V +V FH V S ++S S+D T++++D + + +T+SV
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSV-MVSASEDATIKVWDYETGDFERTLKGHTDSV 153
Query: 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS 203
+D+ F+ HS AS S + TI+ WD + E C H + + P + +AS
Sbjct: 154 QDISFD-HSGKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 204 RDKTIKVWDLSIKPSLEYSINTIASVSRIKW----RPQRKFHL-ASCSLVVDSSVNVWDI 258
RDKTIK+W++ Y + T +W RP + L ASCS D +V VW +
Sbjct: 212 RDKTIKMWEVQTG----YCVKTFTG--HREWVRMVRPNQDGTLIASCSN--DQTVRVWVV 263
Query: 259 RRPYIPLASFTEHKDVVSGLAW 280
A EH+ VV ++W
Sbjct: 264 ATKECK-AELREHEHVVECISW 284
Score = 142 (55.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 41/174 (23%), Positives = 75/174 (43%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ + + + + VW+ ER H +V +SF + L S S D T++L+D
Sbjct: 123 MVSASEDATIKVWDY---ETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWD 178
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ E + H + +V V P+ + S S + TI+ W+V+ C FT H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGY-CVKTFTGHREW 236
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKF 240
+ + + +A+ S D+T++VW ++ K V I W P+ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 34/105 (32%), Positives = 59/105 (56%)
Query: 112 WLISGSQDGTMRLFDIR---CQESTKIFHSNTESVRDVEFNPHSPYAFA-SVSENGTIQQ 167
+L+SGS+D T++++D+ C T + H N VR V F HS F S +++ T++
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCL-MTLVGHDNW--VRGVLF--HSGGKFILSCADDKTLRV 364
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
WD + ++C AH + + D+H ++ T S D+T+KVW+
Sbjct: 365 WDYKN-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 45/167 (26%), Positives = 73/167 (43%)
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
IR Q+ S ++ EF P + + ++W R PEK Y + H P
Sbjct: 59 IRLQKKVMELESKLNEAKE-EFTSGGP-----LGQKRDPKEWIPRPPEK--YALSGHRSP 110
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHLASC 245
+ +HP + + +AS D TIKVWD E ++ SV I + K LASC
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSGKL-LASC 168
Query: 246 SLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSR 292
S D ++ +WD + + + + H VS +A + +++SR
Sbjct: 169 S--ADMTIKLWDFQG-FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 205 (77.2 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 46/168 (27%), Positives = 87/168 (51%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLG-QISRSKQERVFND----HKRT--VNKVSFHYVE 109
+ W+ ++ATGA + + +W++ Q S + +V + H+ T VN V FH
Sbjct: 188 LCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTDIVNDVQFHPQH 247
Query: 110 SNWLISGSQDGTMRLFDIRC---QESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQ 166
L S S D T+++ D R +E+ K+ ++++++ V NP + Y A+ S + T+
Sbjct: 248 EALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLATASADKTVA 307
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHP-EHAWLATASRDKTIKVWDL 213
WD+R P + + H ++ +W P + LA++S D+ + +WDL
Sbjct: 308 LWDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDL 355
Score = 144 (55.7 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 44/157 (28%), Positives = 75/157 (47%)
Query: 148 FNPHSPYAFASVSENGTIQQWDVRRPE---------KCFYQFTAHSGPIFACDWHPEH-A 197
+NP+ P A+ +E+ I WDV+ ++ H+ + +HP+H A
Sbjct: 190 WNPNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTDIVNDVQFHPQHEA 249
Query: 198 WLATASRDKTIKVWDLSIKPSLEYS--INTIA-SVSRIKWRPQRKFHLASCSLVVDSSVN 254
LA+ S D T+++ D + P E I + +++ + P + LA+ S D +V
Sbjct: 250 LLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLATAS--ADKTVA 307
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+WD+R PY L + H+D V GL W + +ASS
Sbjct: 308 LWDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASS 344
>UNIPROTKB|P43033 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9913 "Bos taurus" [GO:0045502 "dynein
binding" evidence=IDA] [GO:0034452 "dynactin binding" evidence=IDA]
[GO:0046469 "platelet activating factor metabolic process"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0043274
"phospholipase binding" evidence=IDA] [GO:0008201 "heparin binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008017 "microtubule binding" evidence=IDA] [GO:0031965
"nuclear membrane" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005829
GO:GO:0007399 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819
InterPro:IPR019775 GO:GO:0016042 GO:GO:0006810 GO:GO:0031965
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008201
GO:GO:0005815 InterPro:IPR013720 Pfam:PF08513 GO:GO:0008017
GO:GO:0005874 GO:GO:0034452 GO:GO:0045502 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:D30615 IPI:IPI00703460 RefSeq:NP_777088.1 UniGene:Bt.111460
ProteinModelPortal:P43033 SMR:P43033 IntAct:P43033 STRING:P43033
PRIDE:P43033 GeneID:282513 KEGG:bta:282513 CTD:5048
NextBio:20806263 GO:GO:0043274 GO:GO:0046469 Uniprot:P43033
Length = 410
Score = 204 (76.9 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 61/202 (30%), Positives = 97/202 (48%)
Query: 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV 143
I R ++ + H+ V +V FH V S ++S S+D T++++D + + +T+SV
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSV-MVSASEDATIKVWDYETGDFERTLKGHTDSV 153
Query: 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS 203
D+ F+ HS AS S + TI+ WD + E C H + + P + +AS
Sbjct: 154 EDISFD-HSGKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 204 RDKTIKVWDLSIKPSLEYSINTIASVSRIKW----RPQRKFHL-ASCSLVVDSSVNVWDI 258
RDKTIK+W++ Y + T +W RP + L ASCS D +V VW +
Sbjct: 212 RDKTIKMWEVQTG----YCVKTFTG--HREWVRMVRPNQDGTLIASCSN--DQTVRVWVV 263
Query: 259 RRPYIPLASFTEHKDVVSGLAW 280
A EH+ VV ++W
Sbjct: 264 ATKECK-AELREHEHVVECISW 284
Score = 142 (55.0 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 41/174 (23%), Positives = 75/174 (43%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ + + + + VW+ ER H +V +SF + L S S D T++L+D
Sbjct: 123 MVSASEDATIKVWDY---ETGDFERTLKGHTDSVEDISFDH-SGKLLASCSADMTIKLWD 178
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ E + H + +V V P+ + S S + TI+ W+V+ C FT H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVQTGY-CVKTFTGHREW 236
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKF 240
+ + + +A+ S D+T++VW ++ K V I W P+ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 34/105 (32%), Positives = 59/105 (56%)
Query: 112 WLISGSQDGTMRLFDIR---CQESTKIFHSNTESVRDVEFNPHSPYAFA-SVSENGTIQQ 167
+L+SGS+D T++++D+ C T + H N VR V F HS F S +++ T++
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCL-MTLVGHDNW--VRGVLF--HSGGKFILSCADDKTLRV 364
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
WD + ++C AH + + D+H ++ T S D+T+KVW+
Sbjct: 365 WDYKN-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 45/167 (26%), Positives = 73/167 (43%)
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
IR Q+ S ++ EF P + + ++W R PEK Y + H P
Sbjct: 59 IRLQKKVMELESKLNEAKE-EFTSGGP-----LGQKRDPKEWIPRPPEK--YALSGHRSP 110
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHLASC 245
+ +HP + + +AS D TIKVWD E ++ SV I + K LASC
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVEDISFDHSGKL-LASC 168
Query: 246 SLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSR 292
S D ++ +WD + + + + H VS +A + +++SR
Sbjct: 169 S--ADMTIKLWDFQG-FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
>FB|FBgn0046222 [details] [associations]
symbol:CG1109 species:7227 "Drosophila melanogaster"
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE014297 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:Q04724
GeneTree:ENSGT00540000070914 KO:K15542 EMBL:AY051695
RefSeq:NP_730982.1 RefSeq:NP_730983.1 UniGene:Dm.4508 SMR:Q9VNG2
STRING:Q9VNG2 EnsemblMetazoa:FBtr0078713 EnsemblMetazoa:FBtr0078714
GeneID:40698 KEGG:dme:Dmel_CG1109 UCSC:CG1109-RA
FlyBase:FBgn0046222 InParanoid:Q9VNG2 OMA:TLRIWDF OrthoDB:EOG49ZW47
GenomeRNAi:40698 NextBio:820117 Uniprot:Q9VNG2
Length = 807
Score = 209 (78.6 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 59/233 (25%), Positives = 103/233 (44%)
Query: 51 NFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVES 110
+ S + WS ++ + TG G V W S +++ HK + +SF +S
Sbjct: 188 DISVRTMVWSH-NDSWMVTGDHGGYVKYWQ----SNMNNVKMYQAHKEAIRGISFSPTDS 242
Query: 111 NWLISGSQDGTMRLFD-IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGT-IQQW 168
+ +SGS DGT+R++D +RCQE ++ + V+ V ++P + +N I+ W
Sbjct: 243 KF-VSGSDDGTLRIWDFMRCQEE-RVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIW 300
Query: 169 DVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL-SIKPSLEYSINTIA 227
D + AH + W+ WL TASRD +K++D+ +++ ++
Sbjct: 301 DPKSGI-ALATLHAHKSTVMDLKWNDNGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKK 359
Query: 228 SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAW 280
S + W P + CS D S+ W++ T H +V LAW
Sbjct: 360 EASSVSWHPIHEGLF--CSGGSDGSILFWNVGTDKEIGCVETAHDSIVWTLAW 410
Score = 201 (75.8 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 55/226 (24%), Positives = 108/226 (47%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
+AW+ E + TGA++G +WN G E + H +V + + + +S W+++G
Sbjct: 152 LAWTP-EGRRLVTGASSGEFTLWN-GLTFNF--ETILQAHDISVRTMVWSHNDS-WMVTG 206
Query: 117 SQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
G ++ + + K++ ++ E++R + F+P + F S S++GT++ WD R ++
Sbjct: 207 DHGGYVKYWQSN-MNNVKMYQAHKEAIRGISFSP-TDSKFVSGSDDGTLRIWDFMRCQE- 263
Query: 177 FYQFTAHSGPIFACDWHPEHAWLATASRD--KTIKVWDLSIKPSLEYSINTIASVSRIKW 234
H + WHP+ + + S+D + IK+WD +L ++V +KW
Sbjct: 264 ERVLRGHGADVKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKW 323
Query: 235 RPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAW 280
+ L + S D + ++DIR + F HK S ++W
Sbjct: 324 NDNGNW-LVTASR--DHLLKLFDIRNLREEVQVFRGHKKEASSVSW 366
Score = 176 (67.0 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 43/142 (30%), Positives = 74/142 (52%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPY 154
HK TV + ++ NWL++ S+D ++LFDIR +E ++F + + V ++P
Sbjct: 314 HKSTVMDLKWND-NGNWLVTASRDHLLKLFDIRNLREEVQVFRGHKKEASSVSWHPIHEG 372
Query: 155 AFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLS 214
F S +G+I W+V ++ TAH ++ WHP L + S D TIK W +
Sbjct: 373 LFCSGGSDGSILFWNVGTDKEIGCVETAHDSIVWTLAWHPLGHILCSGSNDHTIKFWTRN 432
Query: 215 IKPSL---EYSINTI-ASVSRI 232
L +Y++NT+ AS++ +
Sbjct: 433 RPGDLMRDKYNLNTLPASLAAL 454
Score = 130 (50.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 42/184 (22%), Positives = 72/184 (39%)
Query: 109 ESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQW 168
E L++G+ G L++ I ++ SVR + ++ H+ + G ++ W
Sbjct: 157 EGRRLVTGASSGEFTLWNGLTFNFETILQAHDISVRTMVWS-HNDSWMVTGDHGGYVKYW 215
Query: 169 DVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIAS 228
YQ AH I + P + + S D T+++WD A
Sbjct: 216 QSNMNNVKMYQ--AHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGAD 273
Query: 229 VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFI 288
V + W PQ+ + S S + +WD + I LA+ HK V L W + +
Sbjct: 274 VKCVHWHPQKGM-IVSGSKDNQQPIKIWDPKSG-IALATLHAHKSTVMDLKWNDNGNWLV 331
Query: 289 ASSR 292
+SR
Sbjct: 332 TASR 335
>ZFIN|ZDB-GENE-040426-1993 [details] [associations]
symbol:poc1a "POC1 centriolar protein homolog A
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-1993 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030030 HSSP:P16649
CTD:25886 HOVERGEN:HBG057502 KO:K16482 EMBL:BC045888
IPI:IPI00500664 RefSeq:NP_998214.1 UniGene:Dr.150982
ProteinModelPortal:Q7ZVF0 GeneID:406322 KEGG:dre:406322
NextBio:20817946 Uniprot:Q7ZVF0
Length = 416
Score = 204 (76.9 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 63/226 (27%), Positives = 111/226 (49%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
IA+G+ + +V+VWN+ SR+ + F HK V V F ++ L S S+D T+RL+
Sbjct: 33 IASGSVDASVMVWNMKPQSRAYR---FTGHKDAVTCVQFS-PSAHLLASSSRDKTVRLWV 88
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ + +F ++T SVR V F+ + + S++ +I+ W V R +K H+
Sbjct: 89 PSVKGESVLFRAHTGSVRSVCFSADGQ-SLLTASDDQSIKLWSVHR-QKIICTLREHNNW 146
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCS 246
+ + P+ + + S D+T+K+WD S + + S + + P +A+ S
Sbjct: 147 VRCARFSPDGQLMVSVSDDRTVKLWDASSRQLIHTFCEPGGYSSYVDFHPSSTC-IATAS 205
Query: 247 LVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWR-GDPQLFIASS 291
D++V VWDIR + L + H V+ L++ L ASS
Sbjct: 206 S--DNTVRVWDIRTHTL-LQHYQVHSAAVNALSFHPSGNHLLTASS 248
Score = 174 (66.3 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 55/213 (25%), Positives = 103/213 (48%)
Query: 52 FSCNDVAWSCIEEN---HI-ATGATNGAVVVWNLGQISRSKQERV-FNDHKRTVNKVSFH 106
F+ + A +C++ + H+ A+ + + V +W + K E V F H +V V F
Sbjct: 56 FTGHKDAVTCVQFSPSAHLLASSSRDKTVRLW----VPSVKGESVLFRAHTGSVRSVCFS 111
Query: 107 YVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQ 166
+ L++ S D +++L+ + Q+ + VR F+P SVS++ T++
Sbjct: 112 -ADGQSLLTASDDQSIKLWSVHRQKIICTLREHNNWVRCARFSPDGQL-MVSVSDDRTVK 169
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE-YSINT 225
WD + + F G D+HP +ATAS D T++VWD+ L+ Y +++
Sbjct: 170 LWDASS-RQLIHTFCEPGGYSSYVDFHPSSTCIATASSDNTVRVWDIRTHTLLQHYQVHS 228
Query: 226 IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A+V+ + + P HL + S DS++ + D+
Sbjct: 229 -AAVNALSFHPSGN-HLLTASS--DSTLKILDL 257
Score = 158 (60.7 bits), Expect = 9.2e-09, P = 9.2e-09
Identities = 46/176 (26%), Positives = 89/176 (50%)
Query: 136 FHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE 195
F + +++ ++F+P S AS S + ++ W+++ P+ Y+FT H + + P
Sbjct: 14 FKGHRDAITSLDFSP-SGKQIASGSVDASVMVWNMK-PQSRAYRFTGHKDAVTCVQFSPS 71
Query: 196 HAWLATASRDKTIKVWDLSIK-PSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
LA++SRDKT+++W S+K S+ + +T SV + + + L + D S+
Sbjct: 72 AHLLASSSRDKTVRLWVPSVKGESVLFRAHT-GSVRSVCFSADGQSLLTASD---DQSIK 127
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIKIFIASSR 310
+W + R I + + EH + V + D QL ++ S + +K++ ASSR
Sbjct: 128 LWSVHRQKI-ICTLREHNNWVRCARFSPDGQLMVSVSD------DRTVKLWDASSR 176
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 203 (76.5 bits), Expect = 4.2e-14, P = 4.2e-14
Identities = 53/224 (23%), Positives = 102/224 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQ----ERVFNDHKRTVNKVSFHYVESNW 112
++W+ H+ + + + + +W++ + + + + +F H V VS+H + +
Sbjct: 148 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 207
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
S + D + ++D R ++K HS +T V + FNP+S + A+ S + T+ WD
Sbjct: 208 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 267
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSI------------- 215
+R + + F +H IF W P + LA++ D+ + VWDLS
Sbjct: 268 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG 327
Query: 216 KPSLEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
P L + A +S W P + + CS+ D+ + VW +
Sbjct: 328 PPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQVWQM 369
Score = 163 (62.4 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 49/176 (27%), Positives = 86/176 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF +T V DV +
Sbjct: 141 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 200
Query: 149 NPHSPYAFASVSENGTIQQWDVR--RPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 201 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 260
Query: 206 KTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL ++K L + + +++W P + LAS D +NVWD+ +
Sbjct: 261 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLNVWDLSK 314
Score = 159 (61.0 bits), Expect = 6.2e-09, P = 6.2e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV+W + E+ + A + +++W+ + SK + H VN +SF+ L +
Sbjct: 197 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 256
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V+++PH+ AS + + WD+ +
Sbjct: 257 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 316
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D ++VW ++
Sbjct: 317 EEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 370
Score = 152 (58.6 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL 199
+ +NP+ S S++ TI WD+ K FT H+ + WH H L
Sbjct: 148 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 207
Query: 200 -ATASRDKTIKVWDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
+ + D+ + +WD + KPS +T A V+ + + P +F LA+ S D +V
Sbjct: 208 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVA 264
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+WD+R + L SF HKD + + W + +ASS
Sbjct: 265 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 301
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 203 (76.5 bits), Expect = 5.1e-14, P = 5.1e-14
Identities = 39/162 (24%), Positives = 81/162 (50%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQER---VFNDHKRTVNKVSFHYVESNWL 113
++WS +E ++ +G+ + + +W++ + K V+ H+ + VS+H N
Sbjct: 174 LSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLF 233
Query: 114 ISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRP 173
S +DG + ++D R + + V + FNP + + A+ S + T+ +D+R+
Sbjct: 234 GSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRKL 293
Query: 174 EKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
+ ++H G +F +W P H LA++ D+ + VWDL+
Sbjct: 294 NAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLN 335
Score = 164 (62.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 45/173 (26%), Positives = 81/173 (46%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKI------FHSNTESVRDVEFN 149
H + +S+ + +L+SGSQD + L+D+ K+ + + ++ DV ++
Sbjct: 167 HDKEGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWH 226
Query: 150 PHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTI 208
+ F S E+G + WD R + +Q H + ++P + W LATAS D T+
Sbjct: 227 MKNENLFGSAGEDGRLVIWDTRT-NQMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTV 285
Query: 209 KVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
++DL + L + V +++W P + LAS D + VWD+ R
Sbjct: 286 ALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSG--EDRRLMVWDLNR 336
Score = 163 (62.4 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 47/177 (26%), Positives = 84/177 (47%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV+W EN + +G +V+W+ Q +V H+R VN +SF+ + W+++
Sbjct: 222 DVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVKV---HEREVNYLSFNPF-NEWVLA 277
Query: 116 -GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR- 172
S D T+ LFD+R + S+ V VE++P+ AS E+ + WD+ R
Sbjct: 278 TASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRV 337
Query: 173 -PEKCFYQFTAHSGP---IFA--------CD--WHPEHAW-LATASRDKTIKVWDLS 214
E+ + A GP +F+ D W+ W +A+ + D +++VW ++
Sbjct: 338 GEEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMA 394
Score = 135 (52.6 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 45/173 (26%), Positives = 74/173 (42%)
Query: 135 IFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHP 194
++ + ++ DV ++ + F S E+G + WD R + +Q H + ++P
Sbjct: 212 VYEGHESAIADVSWHMKNENLFGSAGEDGRLVIWDTRT-NQMQHQVKVHEREVNYLSFNP 270
Query: 195 EHAW-LATASRDKTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSS 252
+ W LATAS D T+ ++DL + L + V +++W P + LAS D
Sbjct: 271 FNEWVLATASSDSTVALFDLRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSG--EDRR 328
Query: 253 VNVWDIRR---------------PYIPLASFTEHKDVVSGLAWRGDPQLFIAS 290
+ VWD+ R P L S HK +S AW + IAS
Sbjct: 329 LMVWDLNRVGEEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVIAS 381
>SGD|S000005261 [details] [associations]
symbol:PFS2 "Subunit of the cleavage and polyadenylation
factor (CPF) complex" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006379 "mRNA cleavage" evidence=IMP;IDA] [GO:0006378 "mRNA
polyadenylation" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000005261 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0006378 EMBL:BK006947 EMBL:Z46259
GO:GO:0005847 GO:GO:0006379 GeneTree:ENSGT00540000070914 KO:K15542
HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD EMBL:Z71593 EMBL:AY693058
PIR:S51295 RefSeq:NP_014082.1 ProteinModelPortal:P42841 SMR:P42841
DIP:DIP-5816N IntAct:P42841 MINT:MINT-381244 STRING:P42841
PaxDb:P42841 PeptideAtlas:P42841 EnsemblFungi:YNL317W GeneID:855399
KEGG:sce:YNL317W CYGD:YNL317w OMA:NGMTFNF NextBio:979220
Genevestigator:P42841 GermOnline:YNL317W Uniprot:P42841
Length = 465
Score = 204 (76.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 53/224 (23%), Positives = 106/224 (47%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
+ W+ E + +G +WN + E + H V + + + +S+W+ISG
Sbjct: 99 IQWTP-EGRRLVVATYSGEFSLWNASSFTF---ETLMQAHDSAVTTMKYSH-DSDWMISG 153
Query: 117 SQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
DG ++++ +I ++TES+RD+ F+ + F + S++ ++ W+ ++
Sbjct: 154 DADGMIKIWQPNFSMVKEIDAAHTESIRDMAFSSNDS-KFVTCSDDNILKIWNFSNGKQ- 211
Query: 177 FYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRP 236
+ H + +CDWHPE +A+AS+D +K+WD + + +V + +++P
Sbjct: 212 ERVLSGHHWDVKSCDWHPEMGLIASASKDNLVKLWDPRSGNCISSILKFKHTVLKTRFQP 271
Query: 237 QRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAW 280
+ L + S D S V+DIR L + D ++ L W
Sbjct: 272 TKGNLLMAISK--DKSCRVFDIRYSMKELMCVRDETDYMT-LEW 312
>UNIPROTKB|F1NUJ8 [details] [associations]
symbol:POC1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005814 "centriole" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932
GeneTree:ENSGT00700000104282 OMA:ANHVEFH EMBL:AADN02052960
EMBL:AADN02052961 EMBL:AADN02052962 EMBL:AADN02052963
IPI:IPI00603564 Ensembl:ENSGALT00000002196 Uniprot:F1NUJ8
Length = 320
Score = 199 (75.1 bits), Expect = 5.4e-14, P = 5.4e-14
Identities = 51/193 (26%), Positives = 96/193 (49%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+A+G+ + V +W S + VF H TV V F + L++ S D T++++
Sbjct: 77 VASGSRDKTVCLW---VPSVKGESTVFKAHTATVRSVHFSS-DGQSLVTASDDKTIKVWT 132
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ Q+ + VR F+P AS S++ T++ WD + +C + F H G
Sbjct: 133 VHRQKFLFSLSQHINWVRCARFSPDGRL-IASASDDKTVKLWD-KTSRECIHSFCEHGGF 190
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE-YSINTIASVSRIKWRPQRKFHLASC 245
++HP +A A DKT+KVWD+ + L+ Y ++T A+V+ + + P + + +
Sbjct: 191 ANHVEFHPSGTCIAAAGTDKTVKVWDVRMNRLLQHYQVHT-AAVNSLSFHPSGNYLITAS 249
Query: 246 SLVVDSSVNVWDI 258
+ DS++ + D+
Sbjct: 250 N---DSTLKILDL 259
Score = 185 (70.2 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 56/236 (23%), Positives = 111/236 (47%)
Query: 62 IEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLI-SGSQDG 120
+ + +A+G+ + + +W++ R+ HK V V F S L+ SGS+D
Sbjct: 30 LNKKQLASGSMDSCLKIWSMKPQMRAY---CLVGHKDAVMCVQFS--PSGHLVASGSRDK 84
Query: 121 TMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQF 180
T+ L+ + + +F ++T +VR V F+ + + S++ TI+ W V R +K +
Sbjct: 85 TVCLWVPSVKGESTVFKAHTATVRSVHFSSDGQ-SLVTASDDKTIKVWTVHR-QKFLFSL 142
Query: 181 TAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKF 240
+ H + + P+ +A+AS DKT+K+WD + + + + +++ P
Sbjct: 143 SQHINWVRCARFSPDGRLIASASDDKTVKLWDKTSRECIHSFCEHGGFANHVEFHPSGTC 202
Query: 241 HLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSII 296
+A+ D +V VWD+R + L + H V+ L++ I +S S +
Sbjct: 203 -IAAAG--TDKTVKVWDVRMNRL-LQHYQVHTAAVNSLSFHPSGNYLITASNDSTL 254
Score = 151 (58.2 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 53/183 (28%), Positives = 89/183 (48%)
Query: 90 ERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFN 149
ER F H+ + V F + L SGS D ++++ ++ Q + ++V V+F+
Sbjct: 13 ERHFRGHRDAITSVDFS-LNKKQLASGSMDSCLKIWSMKPQMRAYCLVGHKDAVMCVQFS 71
Query: 150 PHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIK 209
P S + AS S + T+ W V + F AH+ + + + + L TAS DKTIK
Sbjct: 72 P-SGHLVASGSRDKTVCLW-VPSVKGESTVFKAHTATVRSVHFSSDGQSLVTASDDKTIK 129
Query: 210 VWDLSIKPSLEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASF 268
VW + + L +S++ I V ++ P + +AS S D +V +WD + + SF
Sbjct: 130 VWTVHRQKFL-FSLSQHINWVRCARFSPDGRL-IASAS--DDKTVKLWD-KTSRECIHSF 184
Query: 269 TEH 271
EH
Sbjct: 185 CEH 187
Score = 113 (44.8 bits), Expect = 0.00069, P = 0.00069
Identities = 44/179 (24%), Positives = 84/179 (46%)
Query: 136 FHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE 195
F + +++ V+F+ + AS S + ++ W ++ P+ Y H + + P
Sbjct: 16 FRGHRDAITSVDFSLNKKQ-LASGSMDSCLKIWSMK-PQMRAYCLVGHKDAVMCVQFSPS 73
Query: 196 HAWLATASRDKTIKVWDLSIK-PSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
+A+ SRDKT+ +W S+K S + +T A+V + + + L + S D ++
Sbjct: 74 GHLVASGSRDKTVCLWVPSVKGESTVFKAHT-ATVRSVHFSSDGQ-SLVTAS--DDKTIK 129
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIKIFIASSRVSI 313
VW + R L S ++H + V + D +L IAS+ K +K++ +SR I
Sbjct: 130 VWTVHRQKF-LFSLSQHINWVRCARFSPDGRL-IASASDD-----KTVKLWDKTSRECI 181
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 203 (76.5 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 53/224 (23%), Positives = 102/224 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQ----ERVFNDHKRTVNKVSFHYVESNW 112
++W+ H+ + + + + +W++ + + + + +F H V VS+H + +
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
S + D + ++D R ++K HS +T V + FNP+S + A+ S + T+ WD
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 302
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSI------------- 215
+R + + F +H IF W P + LA++ D+ + VWDLS
Sbjct: 303 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG 362
Query: 216 KPSLEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
P L + A +S W P + + CS+ D+ + VW +
Sbjct: 363 PPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQVWQM 404
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 49/176 (27%), Positives = 86/176 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF +T V DV +
Sbjct: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 149 NPHSPYAFASVSENGTIQQWDVR--RPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 206 KTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL ++K L + + +++W P + LAS D +NVWD+ +
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLNVWDLSK 349
Score = 159 (61.0 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV+W + E+ + A + +++W+ + SK + H VN +SF+ L +
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V+++PH+ AS + + WD+ +
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D ++VW ++
Sbjct: 352 EEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
Score = 152 (58.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL 199
+ +NP+ S S++ TI WD+ K FT H+ + WH H L
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 200 -ATASRDKTIKVWDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
+ + D+ + +WD + KPS +T A V+ + + P +F LA+ S D +V
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVA 299
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+WD+R + L SF HKD + + W + +ASS
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 203 (76.5 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 53/224 (23%), Positives = 102/224 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQ----ERVFNDHKRTVNKVSFHYVESNW 112
++W+ H+ + + + + +W++ + + + + +F H V VS+H + +
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
S + D + ++D R ++K HS +T V + FNP+S + A+ S + T+ WD
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 302
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSI------------- 215
+R + + F +H IF W P + LA++ D+ + VWDLS
Sbjct: 303 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG 362
Query: 216 KPSLEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
P L + A +S W P + + CS+ D+ + VW +
Sbjct: 363 PPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQVWQM 404
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 49/176 (27%), Positives = 86/176 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF +T V DV +
Sbjct: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 149 NPHSPYAFASVSENGTIQQWDVR--RPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 206 KTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL ++K L + + +++W P + LAS D +NVWD+ +
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLNVWDLSK 349
Score = 159 (61.0 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV+W + E+ + A + +++W+ + SK + H VN +SF+ L +
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V+++PH+ AS + + WD+ +
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D ++VW ++
Sbjct: 352 EEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
Score = 152 (58.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL 199
+ +NP+ S S++ TI WD+ K FT H+ + WH H L
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 200 -ATASRDKTIKVWDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
+ + D+ + +WD + KPS +T A V+ + + P +F LA+ S D +V
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVA 299
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+WD+R + L SF HKD + + W + +ASS
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 203 (76.5 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 53/224 (23%), Positives = 102/224 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQ----ERVFNDHKRTVNKVSFHYVESNW 112
++W+ H+ + + + + +W++ + + + + +F H V VS+H + +
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
S + D + ++D R ++K HS +T V + FNP+S + A+ S + T+ WD
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 302
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSI------------- 215
+R + + F +H IF W P + LA++ D+ + VWDLS
Sbjct: 303 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG 362
Query: 216 KPSLEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
P L + A +S W P + + CS+ D+ + VW +
Sbjct: 363 PPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQVWQM 404
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 49/176 (27%), Positives = 86/176 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF +T V DV +
Sbjct: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 149 NPHSPYAFASVSENGTIQQWDVR--RPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 206 KTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL ++K L + + +++W P + LAS D +NVWD+ +
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLNVWDLSK 349
Score = 159 (61.0 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV+W + E+ + A + +++W+ + SK + H VN +SF+ L +
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V+++PH+ AS + + WD+ +
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D ++VW ++
Sbjct: 352 EEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
Score = 152 (58.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL 199
+ +NP+ S S++ TI WD+ K FT H+ + WH H L
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 200 -ATASRDKTIKVWDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
+ + D+ + +WD + KPS +T A V+ + + P +F LA+ S D +V
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVA 299
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+WD+R + L SF HKD + + W + +ASS
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 203 (76.5 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 53/224 (23%), Positives = 102/224 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQ----ERVFNDHKRTVNKVSFHYVESNW 112
++W+ H+ + + + + +W++ + + + + +F H V VS+H + +
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
S + D + ++D R ++K HS +T V + FNP+S + A+ S + T+ WD
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 302
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSI------------- 215
+R + + F +H IF W P + LA++ D+ + VWDLS
Sbjct: 303 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG 362
Query: 216 KPSLEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
P L + A +S W P + + CS+ D+ + VW +
Sbjct: 363 PPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQVWQM 404
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 49/176 (27%), Positives = 86/176 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF +T V DV +
Sbjct: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 149 NPHSPYAFASVSENGTIQQWDVR--RPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 206 KTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL ++K L + + +++W P + LAS D +NVWD+ +
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLNVWDLSK 349
Score = 159 (61.0 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV+W + E+ + A + +++W+ + SK + H VN +SF+ L +
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V+++PH+ AS + + WD+ +
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D ++VW ++
Sbjct: 352 EEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
Score = 152 (58.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL 199
+ +NP+ S S++ TI WD+ K FT H+ + WH H L
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 200 -ATASRDKTIKVWDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
+ + D+ + +WD + KPS +T A V+ + + P +F LA+ S D +V
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVA 299
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+WD+R + L SF HKD + + W + +ASS
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 203 (76.5 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 53/224 (23%), Positives = 102/224 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQ----ERVFNDHKRTVNKVSFHYVESNW 112
++W+ H+ + + + + +W++ + + + + +F H V VS+H + +
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
S + D + ++D R ++K HS +T V + FNP+S + A+ S + T+ WD
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 302
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSI------------- 215
+R + + F +H IF W P + LA++ D+ + VWDLS
Sbjct: 303 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG 362
Query: 216 KPSLEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
P L + A +S W P + + CS+ D+ + VW +
Sbjct: 363 PPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQVWQM 404
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 49/176 (27%), Positives = 86/176 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF +T V DV +
Sbjct: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 149 NPHSPYAFASVSENGTIQQWDVR--RPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 206 KTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL ++K L + + +++W P + LAS D +NVWD+ +
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLNVWDLSK 349
Score = 159 (61.0 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV+W + E+ + A + +++W+ + SK + H VN +SF+ L +
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V+++PH+ AS + + WD+ +
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D ++VW ++
Sbjct: 352 EEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
Score = 152 (58.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL 199
+ +NP+ S S++ TI WD+ K FT H+ + WH H L
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 200 -ATASRDKTIKVWDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
+ + D+ + +WD + KPS +T A V+ + + P +F LA+ S D +V
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVA 299
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+WD+R + L SF HKD + + W + +ASS
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 203 (76.5 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 53/224 (23%), Positives = 102/224 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQ----ERVFNDHKRTVNKVSFHYVESNW 112
++W+ H+ + + + + +W++ + + + + +F H V VS+H + +
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
S + D + ++D R ++K HS +T V + FNP+S + A+ S + T+ WD
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 302
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSI------------- 215
+R + + F +H IF W P + LA++ D+ + VWDLS
Sbjct: 303 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG 362
Query: 216 KPSLEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
P L + A +S W P + + CS+ D+ + VW +
Sbjct: 363 PPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQVWQM 404
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 49/176 (27%), Positives = 86/176 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF +T V DV +
Sbjct: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 149 NPHSPYAFASVSENGTIQQWDVR--RPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 206 KTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL ++K L + + +++W P + LAS D +NVWD+ +
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLNVWDLSK 349
Score = 159 (61.0 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV+W + E+ + A + +++W+ + SK + H VN +SF+ L +
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V+++PH+ AS + + WD+ +
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D ++VW ++
Sbjct: 352 EEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
Score = 152 (58.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL 199
+ +NP+ S S++ TI WD+ K FT H+ + WH H L
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 200 -ATASRDKTIKVWDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
+ + D+ + +WD + KPS +T A V+ + + P +F LA+ S D +V
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVA 299
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+WD+R + L SF HKD + + W + +ASS
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 203 (76.5 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 53/224 (23%), Positives = 102/224 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQ----ERVFNDHKRTVNKVSFHYVESNW 112
++W+ H+ + + + + +W++ + + + + +F H V VS+H + +
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
S + D + ++D R ++K HS +T V + FNP+S + A+ S + T+ WD
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 302
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSI------------- 215
+R + + F +H IF W P + LA++ D+ + VWDLS
Sbjct: 303 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG 362
Query: 216 KPSLEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
P L + A +S W P + + CS+ D+ + VW +
Sbjct: 363 PPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQVWQM 404
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 49/176 (27%), Positives = 86/176 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF +T V DV +
Sbjct: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 149 NPHSPYAFASVSENGTIQQWDVR--RPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 206 KTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL ++K L + + +++W P + LAS D +NVWD+ +
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLNVWDLSK 349
Score = 159 (61.0 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV+W + E+ + A + +++W+ + SK + H VN +SF+ L +
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V+++PH+ AS + + WD+ +
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D ++VW ++
Sbjct: 352 EEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
Score = 152 (58.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL 199
+ +NP+ S S++ TI WD+ K FT H+ + WH H L
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 200 -ATASRDKTIKVWDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
+ + D+ + +WD + KPS +T A V+ + + P +F LA+ S D +V
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVA 299
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+WD+R + L SF HKD + + W + +ASS
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 203 (76.5 bits), Expect = 5.5e-14, P = 5.5e-14
Identities = 53/224 (23%), Positives = 102/224 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQ----ERVFNDHKRTVNKVSFHYVESNW 112
++W+ H+ + + + + +W++ + + + + +F H V VS+H + +
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
S + D + ++D R ++K HS +T V + FNP+S + A+ S + T+ WD
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 302
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSI------------- 215
+R + + F +H IF W P + LA++ D+ + VWDLS
Sbjct: 303 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG 362
Query: 216 KPSLEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
P L + A +S W P + + CS+ D+ + VW +
Sbjct: 363 PPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQVWQM 404
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 49/176 (27%), Positives = 86/176 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF +T V DV +
Sbjct: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 149 NPHSPYAFASVSENGTIQQWDVR--RPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 206 KTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL ++K L + + +++W P + LAS D +NVWD+ +
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLNVWDLSK 349
Score = 159 (61.0 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV+W + E+ + A + +++W+ + SK + H VN +SF+ L +
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V+++PH+ AS + + WD+ +
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D ++VW ++
Sbjct: 352 EEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
Score = 152 (58.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL 199
+ +NP+ S S++ TI WD+ K FT H+ + WH H L
Sbjct: 183 LSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 200 -ATASRDKTIKVWDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
+ + D+ + +WD + KPS +T A V+ + + P +F LA+ S D +V
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVA 299
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+WD+R + L SF HKD + + W + +ASS
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|F1P0F4 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR026962
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013
GeneTree:ENSGT00700000104017 GO:GO:0008352 PANTHER:PTHR19845
EMBL:AADN02065753 EMBL:AADN02065752 IPI:IPI00821846
Ensembl:ENSGALT00000040449 ArrayExpress:F1P0F4 Uniprot:F1P0F4
Length = 661
Score = 206 (77.6 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 48/152 (31%), Positives = 85/152 (55%)
Query: 63 EENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTM 122
+E I G+ +G++ VW+L +K R HK + + FH S ++ SGS D +
Sbjct: 74 KEELIVAGSQSGSIRVWDL---EAAKILRTLLGHKANICSLDFHPYGS-FVASGSLDTDI 129
Query: 123 RLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA 182
+L+D+R + + S+T++VR + F+P + AS +++ T++ WD+ K ++FT
Sbjct: 130 KLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAG-KVMFEFTG 187
Query: 183 HSGPIFACDWHPEHAWL-ATASRDKTIKVWDL 213
H GP+ ++HP +L A+ S TI+ WDL
Sbjct: 188 HYGPVNVVEFHPSIEYLLASGSSSMTIRFWDL 219
Score = 203 (76.5 bits), Expect = 1.4e-13, P = 1.4e-13
Identities = 48/198 (24%), Positives = 105/198 (53%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ATG + V VW+ +++ H + + E +++GSQ G++R++D
Sbjct: 36 LATGGDDCRVNVWS---VNKPNCVMSLTGHTTPIESLQISAKEE-LIVAGSQSGSIRVWD 91
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ + + + ++ ++F+P+ + AS S + I+ WDVRR + C +++ +H+
Sbjct: 92 LEAAKILRTLLGHKANICSLDFHPYGSFV-ASGSLDTDIKLWDVRR-KGCIFKYKSHTQA 149
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTIASVSRIKWRPQRKFHLASC 245
+ + P+ WLA+A+ D T+K+WDL+ K E++ V+ +++ P ++ LAS
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFT-GHYGPVNVVEFHPSIEYLLASG 208
Query: 246 SLVVDSSVNVWDIRRPYI 263
S + ++ WD+ + ++
Sbjct: 209 SSSM--TIRFWDLEKFHV 224
>UNIPROTKB|Q9GL51 [details] [associations]
symbol:PAFAH1B1 "Platelet-activating factor acetylhydrolase
IB subunit alpha" species:9823 "Sus scrofa" [GO:0031965 "nuclear
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016042 "lipid catabolic
process" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 GO:GO:0005737 GO:GO:0007399
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0016042 GO:GO:0006810 GO:GO:0031965 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 HOGENOM:HOG000184015 HOVERGEN:HBG006271
KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 CTD:5048 EMBL:AF319658
RefSeq:NP_999415.1 UniGene:Ssc.802 ProteinModelPortal:Q9GL51
SMR:Q9GL51 STRING:Q9GL51 PRIDE:Q9GL51 GeneID:397482 KEGG:ssc:397482
Uniprot:Q9GL51
Length = 410
Score = 202 (76.2 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 60/202 (29%), Positives = 98/202 (48%)
Query: 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV 143
I R ++ + H+ V +V FH V S ++S S+D T++++D + + +T+SV
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSV-MVSASEDATIKVWDYETGDFERTLKGHTDSV 153
Query: 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS 203
+D+ F+ HS AS S + TI+ WD + E C H + + P + +A+
Sbjct: 154 QDISFD-HSGKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSAA 211
Query: 204 RDKTIKVWDLSIKPSLEYSINTIASVSRIKW----RPQRKFHL-ASCSLVVDSSVNVWDI 258
RDKTIK+W++ Y + T +W RP + L ASCS D +V VW +
Sbjct: 212 RDKTIKMWEVQTG----YCVKTFTG--HREWVRMVRPNQDGTLIASCSN--DQTVRVWVV 263
Query: 259 RRPYIPLASFTEHKDVVSGLAW 280
A EH+ VV ++W
Sbjct: 264 ATKECK-AELREHEHVVECISW 284
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 40/174 (22%), Positives = 75/174 (43%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ + + + + VW+ ER H +V +SF + L S S D T++L+D
Sbjct: 123 MVSASEDATIKVWDY---ETGDFERTLKGHTDSVQDISFDH-SGKLLASCSADMTIKLWD 178
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ E + H + +V V P+ + S + + TI+ W+V+ C FT H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSAARDKTIKMWEVQTGY-CVKTFTGHREW 236
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKF 240
+ + + +A+ S D+T++VW ++ K V I W P+ +
Sbjct: 237 VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSY 290
Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 34/105 (32%), Positives = 59/105 (56%)
Query: 112 WLISGSQDGTMRLFDIR---CQESTKIFHSNTESVRDVEFNPHSPYAFA-SVSENGTIQQ 167
+L+SGS+D T++++D+ C T + H N VR V F HS F S +++ T++
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCL-MTLVGHDNW--VRGVLF--HSGGKFILSCADDKTLRV 364
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
WD + ++C AH + + D+H ++ T S D+T+KVW+
Sbjct: 365 WDYKN-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 123 (48.4 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 44/167 (26%), Positives = 73/167 (43%)
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
IR Q+ S ++ EF P + + ++W R PEK Y + H P
Sbjct: 59 IRLQKKVMELESKLNEAKE-EFTSGGP-----LGQKRDPKEWIPRPPEK--YALSGHRSP 110
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHLASC 245
+ +HP + + +AS D TIKVWD E ++ SV I + K LASC
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHSGKL-LASC 168
Query: 246 SLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSR 292
S D ++ +WD + + + + H VS +A + ++++R
Sbjct: 169 S--ADMTIKLWDFQG-FECIRTMHGHDHNVSSVAIMPNGDHIVSAAR 212
>UNIPROTKB|Q9PTR5 [details] [associations]
symbol:PAFAH1B1 "Lissencephaly-1 homolog" species:9031
"Gallus gallus" [GO:0007067 "mitosis" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0000132 "establishment of mitotic
spindle orientation" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0001667
"ameboidal cell migration" evidence=IEA] [GO:0001675 "acrosome
assembly" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001961 "positive regulation of cytokine-mediated
signaling pathway" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0007268 "synaptic transmission"
evidence=IEA] [GO:0007405 "neuroblast proliferation" evidence=IEA]
[GO:0007611 "learning or memory" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0008090 "retrograde axon
cargo transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IEA] [GO:0009306 "protein secretion"
evidence=IEA] [GO:0021540 "corpus callosum morphogenesis"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0031023 "microtubule organizing center organization"
evidence=IEA] [GO:0031252 "cell leading edge" evidence=IEA]
[GO:0031512 "motile primary cilium" evidence=IEA] [GO:0032319
"regulation of Rho GTPase activity" evidence=IEA] [GO:0036035
"osteoclast development" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046329 "negative regulation of JNK
cascade" evidence=IEA] [GO:0047496 "vesicle transport along
microtubule" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0048854 "brain morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0051081 "nuclear envelope disassembly"
evidence=IEA] [GO:0051219 "phosphoprotein binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005938
GO:GO:0000132 GO:GO:0005635 GO:GO:0005813 GO:GO:0048471
GO:GO:0005875 GO:GO:0007399 GO:GO:0031252 GO:GO:0030154
GO:GO:0000776 GO:GO:0051301 GO:GO:0016477 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030036 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008090 InterPro:IPR013720 Pfam:PF08513
GO:GO:0000235 GO:GO:0032319 GO:GO:0031023 GO:GO:0047496
GO:GO:0031512 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:5048 EMBL:AF113946 IPI:IPI00596826
RefSeq:NP_989655.1 UniGene:Gga.11892 ProteinModelPortal:Q9PTR5
SMR:Q9PTR5 STRING:Q9PTR5 PRIDE:Q9PTR5 Ensembl:ENSGALT00000009368
GeneID:374224 KEGG:gga:374224 InParanoid:Q9PTR5 NextBio:20813726
GO:GO:0051081 Uniprot:Q9PTR5
Length = 410
Score = 202 (76.2 bits), Expect = 6.6e-14, P = 6.6e-14
Identities = 60/202 (29%), Positives = 98/202 (48%)
Query: 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV 143
I R ++ + H+ V +V FH V S ++S S+D T++++D + + +T+SV
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSV-MVSASEDATIKVWDYETGDFERTLKGHTDSV 153
Query: 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS 203
+D+ F+ H+ AS S + TI+ WD + E C H + + P + +AS
Sbjct: 154 QDISFD-HTGKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 204 RDKTIKVWDLSIKPSLEYSINTIASVSRIKW----RPQRKFHL-ASCSLVVDSSVNVWDI 258
RDKTIK+W++ Y + T +W RP + L ASCS D +V VW +
Sbjct: 212 RDKTIKMWEVQTG----YCVKTFTG--HREWVRMVRPNQDGTLIASCSN--DQTVRVWVV 263
Query: 259 RRPYIPLASFTEHKDVVSGLAW 280
A EH+ VV ++W
Sbjct: 264 ATKECK-AELREHEHVVECISW 284
Score = 132 (51.5 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 35/105 (33%), Positives = 59/105 (56%)
Query: 112 WLISGSQDGTMRLFDIR---CQESTKIFHSNTESVRDVEFNPHSPYAFA-SVSENGTIQQ 167
+L+SGS+D T++++DI C T + H N VR V F HS F S +++ T++
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCL-MTLVGHDNW--VRGVLF--HSGGKFILSCADDKTLRV 364
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
WD + ++C AH + + D+H ++ T S D+T+KVW+
Sbjct: 365 WDFKN-KRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 125 (49.1 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 45/167 (26%), Positives = 73/167 (43%)
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
IR Q+ S ++ EF P + + ++W R PEK Y + H P
Sbjct: 59 IRLQKKVMELESKLNEAKE-EFTSGGP-----LGQKRDPKEWIPRPPEK--YALSGHRSP 110
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHLASC 245
+ +HP + + +AS D TIKVWD E ++ SV I + K LASC
Sbjct: 111 VTRVIFHPVFSVMVSASEDATIKVWDYETG-DFERTLKGHTDSVQDISFDHTGKL-LASC 168
Query: 246 SLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSR 292
S D ++ +WD + + + + H VS +A + +++SR
Sbjct: 169 S--ADMTIKLWDFQG-FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
>UNIPROTKB|E3W9A3 [details] [associations]
symbol:KATNB1 "Katanin p80 WD40 repeat-containing subunit
B1" species:9031 "Gallus gallus" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0008352 "katanin complex" evidence=IEA]
[GO:0051013 "microtubule severing" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007026 "negative
regulation of microtubule depolymerization" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0031117 "positive regulation
of microtubule depolymerization" evidence=IEA] [GO:0045502 "dynein
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005886 GO:GO:0005813
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008568 GO:GO:0051013 GO:GO:0000922
GeneTree:ENSGT00700000104017 GO:GO:0007026 GO:GO:0008352
PANTHER:PTHR19845 IPI:IPI00822740 OMA:NAISRTP GO:GO:0031117
EMBL:AADN02065753 EMBL:AADN02065752 ProteinModelPortal:E3W9A3
Ensembl:ENSGALT00000040450 ArrayExpress:E3W9A3 Uniprot:E3W9A3
Length = 661
Score = 204 (76.9 bits), Expect = 1.1e-13, P = 1.1e-13
Identities = 47/151 (31%), Positives = 84/151 (55%)
Query: 63 EENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTM 122
+E I G+ +G++ VW+L +K R HK + + FH S ++ SGS D +
Sbjct: 74 KEELIVAGSQSGSIRVWDL---EAAKILRTLLGHKANICSLDFHPYGS-FVASGSLDTDI 129
Query: 123 RLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA 182
+L+D+R + + S+T++VR + F+P + AS +++ T++ WD+ K ++FT
Sbjct: 130 KLWDVRRKGCIFKYKSHTQAVRCLRFSPDGKW-LASAADDHTVKLWDLTAG-KVMFEFTG 187
Query: 183 HSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
H GP+ ++HP LA + +TI+ WDL
Sbjct: 188 HYGPVNVVEFHPSEYPLAGSPVHRTIRFWDL 218
Score = 196 (74.1 bits), Expect = 9.5e-13, P = 9.5e-13
Identities = 47/198 (23%), Positives = 103/198 (52%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ATG + V VW+ +++ H + + E +++GSQ G++R++D
Sbjct: 36 LATGGDDCRVNVWS---VNKPNCVMSLTGHTTPIESLQISAKEE-LIVAGSQSGSIRVWD 91
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ + + + ++ ++F+P+ + AS S + I+ WDVRR + C +++ +H+
Sbjct: 92 LEAAKILRTLLGHKANICSLDFHPYGSFV-ASGSLDTDIKLWDVRR-KGCIFKYKSHTQA 149
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTIASVSRIKWRPQRKFHLASC 245
+ + P+ WLA+A+ D T+K+WDL+ K E++ V+ +++ P ++ LA
Sbjct: 150 VRCLRFSPDGKWLASAADDHTVKLWDLTAGKVMFEFT-GHYGPVNVVEFHPS-EYPLAGS 207
Query: 246 SLVVDSSVNVWDIRRPYI 263
V ++ WD+ + ++
Sbjct: 208 P--VHRTIRFWDLEKFHV 223
>TAIR|locus:2154438 [details] [associations]
symbol:AT5G23430 "AT5G23430" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051013 GO:GO:0005874
GO:GO:0080008 EMBL:AB018110 EMBL:BT002053 IPI:IPI00519668
IPI:IPI00532083 RefSeq:NP_197734.2 RefSeq:NP_851064.1
UniGene:At.45963 ProteinModelPortal:Q8H0T9 SMR:Q8H0T9 IntAct:Q8H0T9
PaxDb:Q8H0T9 PRIDE:Q8H0T9 EnsemblPlants:AT5G23430.1 GeneID:832409
KEGG:ath:AT5G23430 GeneFarm:2999 TAIR:At5g23430
HOGENOM:HOG000008039 InParanoid:Q8H0T9 OMA:DFKCHEG PhylomeDB:Q8H0T9
ProtClustDB:CLSN2717628 Genevestigator:Q8H0T9 GermOnline:AT5G23430
GO:GO:0008352 HAMAP:MF_03022 PANTHER:PTHR19845 Uniprot:Q8H0T9
Length = 837
Score = 205 (77.2 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 53/191 (27%), Positives = 86/191 (45%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+A GA +G + +W+L + +K R H+ V FH + SGS D ++++D
Sbjct: 74 VAAGAASGTIKLWDLEE---AKIVRTLTGHRSNCISVDFHPF-GEFFASGSLDTNLKIWD 129
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
IR + + +T V + F P + S E+ ++ WD+ K +F +H G
Sbjct: 130 IRKKGCIHTYKGHTRGVNVLRFTPDGRWV-VSGGEDNIVKVWDLTAG-KLLTEFKSHEGQ 187
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCS 246
I + D+HP LAT S D+T+K WDL + A V + + P K L C
Sbjct: 188 IQSLDFHPHEFLLATGSADRTVKFWDLETFELIGSGGPETAGVRCLSFNPDGKTVL--CG 245
Query: 247 LVVDSSVNVWD 257
L + W+
Sbjct: 246 LQESLKIFSWE 256
>FB|FBgn0035922 [details] [associations]
symbol:Pex7 "Peroxin 7" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006911 EMBL:AE014296 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016558 KO:K13341
OMA:GHEYAVR GO:GO:0005053 PANTHER:PTHR22850:SF4
GeneTree:ENSGT00700000104578 RefSeq:NP_001137914.1
RefSeq:NP_648251.1 UniGene:Dm.15472 SMR:Q9VSN7 DIP:DIP-21383N
IntAct:Q9VSN7 MINT:MINT-790667 STRING:Q9VSN7
EnsemblMetazoa:FBtr0076568 EnsemblMetazoa:FBtr0273328 GeneID:38994
KEGG:dme:Dmel_CG6486 UCSC:CG6486-RA FlyBase:FBgn0035922
InParanoid:Q9VSN7 OrthoDB:EOG431ZDN ChiTaRS:CG6486 GenomeRNAi:38994
NextBio:811365 Uniprot:Q9VSN7
Length = 339
Score = 197 (74.4 bits), Expect = 1.3e-13, P = 1.3e-13
Identities = 71/269 (26%), Positives = 117/269 (43%)
Query: 28 IFLIK---DTEFVETHNLRVGKNINLNFSCN--DVAWSCIEENHIATGATNGAVVVW-NL 81
+FL++ +T T +G+ L +S DVAW + AT + +G++ +W L
Sbjct: 42 LFLLEQNSNTNSSSTDGQSLGELCRLEWSDGLFDVAWCPYAADIAATASGDGSLQIWCGL 101
Query: 82 GQISRS-----KQERV-FNDHKRTVNKVSF-HYVESNWLISGSQDGTMRLFDIRCQESTK 134
S S KQ + +HK V + + + L+SGS D T++L+D Q S
Sbjct: 102 DGESASNQLTPKQPLICLQEHKNEVYSLDWGEKWNYHTLLSGSWDCTLKLWDCNRQNSIT 161
Query: 135 IFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWD-VRRPEKCFYQFTAHSGPIFACDW- 192
F + + + +F+P FASVS +G + W+ + K AH+ CDW
Sbjct: 162 TFVGHNDLIYGAKFSPLIANLFASVSTDGHLNLWNSLDFAGKPLMSIEAHASEALCCDWS 221
Query: 193 HPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHLASCSLVVDS 251
H + L T D I+ WDL + + + + +V R+ P LAS + D
Sbjct: 222 HFDRNVLVTGGSDGLIRGWDLRKMRTHVFELYSGEFAVRRLACSPHSAAVLASANY--DF 279
Query: 252 SVNVWDIRRPYIPLASFTEHKDVVSGLAW 280
+ +W++ R H + V GL W
Sbjct: 280 TTRIWNLERGESAQEVNARHTEFVCGLDW 308
Score = 122 (48.0 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 38/150 (25%), Positives = 67/150 (44%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
N A+ +T+G + +WN + K H + + + N L++G DG +R
Sbjct: 181 NLFASVSTDGHLNLWNSLDFA-GKPLMSIEAHASEALCCDWSHFDRNVLVTGGSDGLIRG 239
Query: 125 FDIRCQESTKIF--HSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA 182
+D+R + T +F +S +VR + +PHS AS + + T + W++ R E
Sbjct: 240 WDLR-KMRTHVFELYSGEFAVRRLACSPHSAAVLASANYDFTTRIWNLERGESAQEVNAR 298
Query: 183 HSGPIFACDWHPEHAW-LATASRDKTIKVW 211
H+ + DW+P LA D V+
Sbjct: 299 HTEFVCGLDWNPHRTHQLADCGWDSLANVY 328
>DICTYBASE|DDB_G0288375 [details] [associations]
symbol:lis1 "lissencephaly-1 homolog protein"
species:44689 "Dictyostelium discoideum" [GO:0071539 "protein
localization to centrosome" evidence=IMP] [GO:0019933
"cAMP-mediated signaling" evidence=IGI] [GO:0051645 "Golgi
localization" evidence=IMP] [GO:0051642 "centrosome localization"
evidence=IMP] [GO:0045504 "dynein heavy chain binding"
evidence=IPI] [GO:0031592 "centrosomal corona" evidence=IDA]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0015630
"microtubule cytoskeleton" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051301 "cell division" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 dictyBase:DDB_G0288375
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775
GO:GO:0019933 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CM000154_GR GO:GO:0051642
GO:GO:0051645 EMBL:AAFI02000111 InterPro:IPR013720 Pfam:PF08513
GO:GO:0005874 HSSP:P63005 GO:GO:0031592 GO:GO:0071539 KO:K01062
OMA:WVRGLAF HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 EMBL:AJ512336
EMBL:AJ512794 RefSeq:XP_636715.1 ProteinModelPortal:Q8I0F4
SMR:Q8I0F4 STRING:Q8I0F4 EnsemblProtists:DDB0219930 GeneID:8626591
KEGG:ddi:DDB_G0288375 ProtClustDB:CLSZ2429884 Uniprot:Q8I0F4
Length = 419
Score = 199 (75.1 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 58/218 (26%), Positives = 105/218 (48%)
Query: 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV 143
+ R ++ + H+ +N V FH + ++S S+D T++++D E + +T +V
Sbjct: 93 LPRPPEKHILTGHRNCINSVKFH-PSFSLMVSASEDATIKVWDFESGEFERTLKGHTNAV 151
Query: 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS 203
+D++F+ + AS S + TI+ WD + + C H + + P L ++S
Sbjct: 152 QDIDFDK-TGNLLASCSADLTIKLWDFQTYD-CVKTLHGHDHNVSCVRFTPSGDQLISSS 209
Query: 204 RDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYI 263
RDKTIKVW+ + ++ + V +I +ASCS D ++ W+I +
Sbjct: 210 RDKTIKVWEAATGYCIKTLVGHEDWVRKITVSEDGSC-IASCSN--DQTIKTWNIVKGEC 266
Query: 264 PLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKN 301
LA++ EH VV LA+ + I S +S P K+
Sbjct: 267 -LATYREHSHVVECLAFSTANIIDIPGSLLST-PEGKS 302
Score = 119 (46.9 bits), Expect = 0.00023, P = 0.00023
Identities = 35/109 (32%), Positives = 58/109 (53%)
Query: 109 ESNWLISGSQDGTMRLFDI---RCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTI 165
+ +L +GS+D T++++++ RC +T I H N VR V F+P + SV ++ TI
Sbjct: 315 QCGYLATGSRDKTIKIWELATGRCL-ATYIGHDNW--VRAVRFHPCGKFLL-SVGDDKTI 370
Query: 166 QQWDVRRPEKCFYQFT-AHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
+ WD+ + +C AH+ I D+ + +AT D IKVW L
Sbjct: 371 RVWDIAQG-RCIKTINEAHTHFISCLDFCLHNPHIATGGVDDVIKVWKL 418
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 198 (74.8 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 56/227 (24%), Positives = 104/227 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNL------GQISRSKQERVFNDHKRTVNKVSFHYVES 110
++W+ + H+ + + + V +W++ G+I +K +F H V V++H +
Sbjct: 181 LSWNSNLKGHLLSASDDHTVCLWDISAGPKEGKIVDAKA--IFTGHSAVVEDVAWHLLHE 238
Query: 111 NWLISGSQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQ 167
+ S + D + ++D R ++K HS +T V + FNP+S + A+ S + T+
Sbjct: 239 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 298
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSIKPSLEYSINTI 226
WD+R + + F +H IF W P + LA++ D+ + VWDLS K E S
Sbjct: 299 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS-KIGEEQSAEDA 357
Query: 227 ---------------ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A +S W P + + CS+ D+ + +W +
Sbjct: 358 EDGPPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQIWQM 402
Score = 159 (61.0 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 40/174 (22%), Positives = 78/174 (44%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW + E+ + A + +++W+ + SK + H VN +SF+ L +
Sbjct: 230 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 289
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V ++PH+ AS + + WD+ +
Sbjct: 290 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 349
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D +++W ++
Sbjct: 350 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 403
Score = 152 (58.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 45/159 (28%), Positives = 77/159 (48%)
Query: 113 LISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTI 165
L+S S D T+ L+DI + ++ IF ++ V DV ++ F SV+++ +
Sbjct: 191 LLSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKL 250
Query: 166 QQWDVRR--PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDL-SIKPSLEY 221
WD R K + AH+ + ++P + LAT S DKT+ +WDL ++K L
Sbjct: 251 MIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 310
Query: 222 SINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
+ + ++ W P + LAS D +NVWD+ +
Sbjct: 311 FESHKDEIFQVHWSPHNETILASSG--TDRRLNVWDLSK 347
Score = 144 (55.7 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 43/145 (29%), Positives = 68/145 (46%)
Query: 158 SVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL-ATASRDKTIKV 210
S S++ T+ WD+ K FT HS + WH H L + + D+ + +
Sbjct: 193 SASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 252
Query: 211 WDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266
WD + KPS +T A V+ + + P +F LA+ S D +V +WD+R + L
Sbjct: 253 WDTRSNTTSKPSHSVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLH 309
Query: 267 SFTEHKDVVSGLAWRGDPQLFIASS 291
SF HKD + + W + +ASS
Sbjct: 310 SFESHKDEIFQVHWSPHNETILASS 334
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 198 (74.8 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 53/224 (23%), Positives = 101/224 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQ----ERVFNDHKRTVNKVSFHYVESNW 112
++W+ ++ + + + + +W++ + + + + +F H V VS+H + +
Sbjct: 183 LSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
S + D + ++D R ++K HS T V + FNP+S + AS S + T+ WD
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNCLSFNPNSEFILASGSPDKTVALWD 302
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSI------------- 215
+R + + F +H IF W P + LA++ D+ + VWDLS
Sbjct: 303 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG 362
Query: 216 KPSLEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
P L + A +S W P + + CS+ D+ + VW +
Sbjct: 363 PPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQVWQM 404
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 48/176 (27%), Positives = 87/176 (49%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC--QE-----STKIFHSNTESVRDVEF 148
H++ +S++ S +L+S S D T+ L+DI +E + IF +T V DV +
Sbjct: 176 HQKEGYGLSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVEDVSW 235
Query: 149 NPHSPYAFASVSENGTIQQWDVR--RPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + A++ + ++P + LA+ S D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNCLSFNPNSEFILASGSPD 295
Query: 206 KTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL ++K L + + +++W P + LAS D +NVWD+ +
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLNVWDLSK 349
Score = 154 (59.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV+W + E+ + A + +++W+ + SK + + VN +SF+ L S
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAYTAEVNCLSFNPNSEFILAS 291
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V+++PH+ AS + + WD+ +
Sbjct: 292 GSPDKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D ++VW ++
Sbjct: 352 EEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
Score = 152 (58.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 46/157 (29%), Positives = 72/157 (45%)
Query: 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL 199
+ +NP+ S S++ TI WD+ K FT H+ + WH H L
Sbjct: 183 LSWNPYLSGYLLSASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 200 -ATASRDKTIKVWDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
+ + D+ + +WD + KPS T A V+ + + P +F LAS S D +V
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAYT-AEVNCLSFNPNSEFILASGS--PDKTVA 299
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+WD+R + L SF HKD + + W + +ASS
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
>FB|FBgn0040207 [details] [associations]
symbol:kat80 "katanin 80" species:7227 "Drosophila
melanogaster" [GO:0008352 "katanin complex" evidence=ISS;NAS]
[GO:0051013 "microtubule severing" evidence=ISS;NAS] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0008017 "microtubule
binding" evidence=IEA;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR026962 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0008017 GO:GO:0051013 HSSP:P16649
GO:GO:0008352 PANTHER:PTHR19845 FlyBase:FBgn0040207 EMBL:AF223065
ProteinModelPortal:Q9NHF0 PRIDE:Q9NHF0 InParanoid:Q9NHF0
ArrayExpress:Q9NHF0 Bgee:Q9NHF0 Uniprot:Q9NHF0
Length = 823
Score = 202 (76.2 bits), Expect = 2.7e-13, P = 2.7e-13
Identities = 58/236 (24%), Positives = 118/236 (50%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ TG + V +W +GQ ++ H R+++ V F Y + N++ S G +R +D
Sbjct: 33 LVTGGEDRNVNLWAIGQ---NECFMSLTGHNRSIDCVRFAY-KDNFVYSADDIGIIRRWD 88
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ Q+ + + +S R ++FNP Y S S + T++ WDV+ C H
Sbjct: 89 LNSQKIYSTLNGHMKSGRTLDFNPSGEYV-VSGSNDTTVRLWDVQNENNCIKVCRGHMSH 147
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDL-SIKPSLEYSINT-IASVSRIKWRPQRKFHLAS 244
+ + + P+ W+A+A + +I +WD+ K +E+ + + +++ +++ P +F LA+
Sbjct: 148 VNSVKFSPDGLWIASAGLEGSILIWDIRKSKQIMEFIADPPVTAITCVQFHPF-EFLLAA 206
Query: 245 CSLVVDSSVNVWDIRRPYIPLASFTEH--KDVVSGLAWRGDPQ-LFIASSR-VSII 296
VD +V+++D+ L S T H + + + + + LF+ SS +S+I
Sbjct: 207 GR--VDGTVSIYDLEHQQ--LVSQTTHFYGQAIRCITFSDNGECLFVGSSSGISVI 258
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 197 (74.4 bits), Expect = 2.9e-13, P = 2.9e-13
Identities = 56/227 (24%), Positives = 103/227 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNL------GQISRSKQERVFNDHKRTVNKVSFHYVES 110
++W+ H+ + + + V +W++ G++ +K VF H V V++H +
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKA--VFTGHSAVVEDVAWHLLHE 239
Query: 111 NWLISGSQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQ 167
+ S + D + ++D R ++K HS +T V + FNP+S + A+ S + T+
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSIKPSLEYSINTI 226
WD+R + + F +H IF W P + LA++ D+ + VWDLS K E S
Sbjct: 300 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS-KIGEEQSAEDA 358
Query: 227 ---------------ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A +S W P + + CS+ D+ + +W +
Sbjct: 359 EDGPPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQIWQM 403
Score = 159 (61.0 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 40/174 (22%), Positives = 78/174 (44%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW + E+ + A + +++W+ + SK + H VN +SF+ L +
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 290
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V ++PH+ AS + + WD+ +
Sbjct: 291 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D +++W ++
Sbjct: 351 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
Score = 155 (59.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 47/176 (26%), Positives = 85/176 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ +F ++ V DV +
Sbjct: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAW 234
Query: 149 NPHSPYAFASVSENGTIQQWDVRR--PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 206 KTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL ++K L + + ++ W P + LAS D +NVWD+ +
Sbjct: 295 KTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSG--TDRRLNVWDLSK 348
Score = 145 (56.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 43/145 (29%), Positives = 68/145 (46%)
Query: 158 SVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL-ATASRDKTIKV 210
S S++ T+ WD+ K FT HS + WH H L + + D+ + +
Sbjct: 194 SASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 253
Query: 211 WDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266
WD + KPS +T A V+ + + P +F LA+ S D +V +WD+R + L
Sbjct: 254 WDTRSNTTSKPSHSVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLH 310
Query: 267 SFTEHKDVVSGLAWRGDPQLFIASS 291
SF HKD + + W + +ASS
Sbjct: 311 SFESHKDEIFQVHWSPHNETILASS 335
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 196 (74.1 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 52/224 (23%), Positives = 102/224 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQ----ERVFNDHKRTVNKVSFHYVESNW 112
++W+ ++ + + + + +W++ + + + + +F H V VS+H + +
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
S + D + ++D R ++K HS +T V + FNP+S + A+ S + T+ WD
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 302
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSI------------- 215
+R + + F +H IF W P + LA++ D+ + VWDLS
Sbjct: 303 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG 362
Query: 216 KPSLEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
P L + A +S W P + + CS+ D+ + VW +
Sbjct: 363 PPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQVWQM 404
Score = 161 (61.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 49/176 (27%), Positives = 86/176 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF +T V DV +
Sbjct: 176 HQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 149 NPHSPYAFASVSENGTIQQWDVR--RPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 206 KTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL ++K L + + +++W P + LAS D +NVWD+ +
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLNVWDLSK 349
Score = 159 (61.0 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV+W + E+ + A + +++W+ + SK + H VN +SF+ L +
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V+++PH+ AS + + WD+ +
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D ++VW ++
Sbjct: 352 EEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
Score = 152 (58.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL 199
+ +NP+ S S++ TI WD+ K FT H+ + WH H L
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 200 -ATASRDKTIKVWDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
+ + D+ + +WD + KPS +T A V+ + + P +F LA+ S D +V
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVA 299
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+WD+R + L SF HKD + + W + +ASS
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 196 (74.1 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 52/224 (23%), Positives = 102/224 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQ----ERVFNDHKRTVNKVSFHYVESNW 112
++W+ ++ + + + + +W++ + + + + +F H V VS+H + +
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
S + D + ++D R ++K HS +T V + FNP+S + A+ S + T+ WD
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 302
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSI------------- 215
+R + + F +H IF W P + LA++ D+ + VWDLS
Sbjct: 303 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG 362
Query: 216 KPSLEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
P L + A +S W P + + CS+ D+ + VW +
Sbjct: 363 PPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQVWQM 404
Score = 161 (61.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 49/176 (27%), Positives = 86/176 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF +T V DV +
Sbjct: 176 HQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 149 NPHSPYAFASVSENGTIQQWDVR--RPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 206 KTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL ++K L + + +++W P + LAS D +NVWD+ +
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLNVWDLSK 349
Score = 159 (61.0 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV+W + E+ + A + +++W+ + SK + H VN +SF+ L +
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V+++PH+ AS + + WD+ +
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D ++VW ++
Sbjct: 352 EEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
Score = 152 (58.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL 199
+ +NP+ S S++ TI WD+ K FT H+ + WH H L
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 200 -ATASRDKTIKVWDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
+ + D+ + +WD + KPS +T A V+ + + P +F LA+ S D +V
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVA 299
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+WD+R + L SF HKD + + W + +ASS
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 196 (74.1 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 52/224 (23%), Positives = 102/224 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQ----ERVFNDHKRTVNKVSFHYVESNW 112
++W+ ++ + + + + +W++ + + + + +F H V VS+H + +
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
S + D + ++D R ++K HS +T V + FNP+S + A+ S + T+ WD
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 302
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSI------------- 215
+R + + F +H IF W P + LA++ D+ + VWDLS
Sbjct: 303 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG 362
Query: 216 KPSLEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
P L + A +S W P + + CS+ D+ + VW +
Sbjct: 363 PPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQVWQM 404
Score = 161 (61.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 49/176 (27%), Positives = 86/176 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF +T V DV +
Sbjct: 176 HQKEGYGLSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 149 NPHSPYAFASVSENGTIQQWDVR--RPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 206 KTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL ++K L + + +++W P + LAS D +NVWD+ +
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLNVWDLSK 349
Score = 159 (61.0 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV+W + E+ + A + +++W+ + SK + H VN +SF+ L +
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V+++PH+ AS + + WD+ +
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D ++VW ++
Sbjct: 352 EEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
Score = 152 (58.6 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL 199
+ +NP+ S S++ TI WD+ K FT H+ + WH H L
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 200 -ATASRDKTIKVWDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
+ + D+ + +WD + KPS +T A V+ + + P +F LA+ S D +V
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVA 299
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+WD+R + L SF HKD + + W + +ASS
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 196 (74.1 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 55/227 (24%), Positives = 103/227 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNL------GQISRSKQERVFNDHKRTVNKVSFHYVES 110
++W+ H+ + + + V +W++ G++ +K +F H V V++H +
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKA--IFTGHSAVVEDVAWHLLHE 239
Query: 111 NWLISGSQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQ 167
+ S + D + ++D R ++K HS +T V + FNP+S + A+ S + T+
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSIKPSLEYSINTI 226
WD+R + + F +H IF W P + LA++ D+ + VWDLS K E S
Sbjct: 300 WDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS-KIGEEQSAEDA 358
Query: 227 ---------------ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A +S W P + + CS+ D+ + +W +
Sbjct: 359 EDGPPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQIWQM 403
Score = 159 (61.0 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 40/174 (22%), Positives = 78/174 (44%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW + E+ + A + +++W+ + SK + H VN +SF+ L +
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 290
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V ++PH+ AS + + WD+ +
Sbjct: 291 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D +++W ++
Sbjct: 351 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
Score = 156 (60.0 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 48/176 (27%), Positives = 85/176 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF ++ V DV +
Sbjct: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAW 234
Query: 149 NPHSPYAFASVSENGTIQQWDVRR--PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 206 KTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL ++K L + + ++ W P + LAS D +NVWD+ +
Sbjct: 295 KTVALWDLRNLKLKLHSFESHKDEIFQVHWSPHNETILASSG--TDRRLNVWDLSK 348
Score = 144 (55.7 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 43/145 (29%), Positives = 68/145 (46%)
Query: 158 SVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL-ATASRDKTIKV 210
S S++ T+ WD+ K FT HS + WH H L + + D+ + +
Sbjct: 194 SASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 253
Query: 211 WDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266
WD + KPS +T A V+ + + P +F LA+ S D +V +WD+R + L
Sbjct: 254 WDTRSNTTSKPSHSVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLH 310
Query: 267 SFTEHKDVVSGLAWRGDPQLFIASS 291
SF HKD + + W + +ASS
Sbjct: 311 SFESHKDEIFQVHWSPHNETILASS 335
>UNIPROTKB|Q2HJ56 [details] [associations]
symbol:PWP1 "Periodic tryptophan protein 1 homolog"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BC113302 IPI:IPI00691154 RefSeq:NP_001039631.1
UniGene:Bt.12659 ProteinModelPortal:Q2HJ56 STRING:Q2HJ56
PRIDE:Q2HJ56 Ensembl:ENSBTAT00000006109 GeneID:514147
KEGG:bta:514147 CTD:11137 GeneTree:ENSGT00390000017324
HOGENOM:HOG000212580 HOVERGEN:HBG001543 InParanoid:Q2HJ56 KO:K14791
OMA:RGVAKET OrthoDB:EOG4STS4J NextBio:20871193 Uniprot:Q2HJ56
Length = 500
Score = 197 (74.4 bits), Expect = 4.2e-13, P = 4.2e-13
Identities = 50/169 (29%), Positives = 84/169 (49%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
D++W+ + N +A+ + + V++W++ S K H V + FH E+ LIS
Sbjct: 260 DLSWNKLVRNVLASASADNTVILWDM---SLGKPAASLAVHTDKVQTLQFHPFEAQTLIS 316
Query: 116 GSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEK 175
GS D ++ L+D R E + + + V +N SP F + +++G + D R +K
Sbjct: 317 GSYDKSVALYDCRSPEESHRMWRFSGQIERVTWNHFSPCHFLASTDDGFVYNLDARS-DK 375
Query: 176 CFYQFTAHSGPIFACDWHPE-HAWLATASRDKTIKVWD-LSIKPSLEYS 222
+ AH+ I D + L TAS DK +K+WD L +PSL +S
Sbjct: 376 PIFTLNAHNDEISGLDLSSQIKGCLVTASADKYVKIWDILGDRPSLVHS 424
>ZFIN|ZDB-GENE-040116-3 [details] [associations]
symbol:pafah1b1b "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit b" species:7955 "Danio
rerio" [GO:0040023 "establishment of nucleus localization"
evidence=IMP] [GO:0045494 "photoreceptor cell maintenance"
evidence=IMP] [GO:0045176 "apical protein localization"
evidence=IMP] [GO:0048854 "brain morphogenesis" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810 "transport"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-3
GO:GO:0005737 GO:GO:0030154 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006810 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005815 GO:GO:0045494 InterPro:IPR013720
Pfam:PF08513 GO:GO:0005874 GO:GO:0040023 GO:GO:0048854
GO:GO:0045176 GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OrthoDB:EOG4P5K93 HAMAP:MF_03141
InterPro:IPR017252 PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647
EMBL:DQ141216 EMBL:BC044530 IPI:IPI00500561 RefSeq:NP_958503.1
UniGene:Dr.79815 ProteinModelPortal:Q803D2 SMR:Q803D2 STRING:Q803D2
PRIDE:Q803D2 Ensembl:ENSDART00000031470 GeneID:394247
KEGG:dre:394247 CTD:394247 InParanoid:Q07DR2 NextBio:20815156
Bgee:Q803D2 Uniprot:Q803D2
Length = 410
Score = 195 (73.7 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 59/202 (29%), Positives = 98/202 (48%)
Query: 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV 143
I R ++ + H+ V +V FH V S ++S S+D T++++D + + +T+SV
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFS-LMVSASEDATIKVWDYEAGDFERTLKGHTDSV 153
Query: 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS 203
+D+ F+ + AS S + TI+ WD + E C H + + P + +AS
Sbjct: 154 QDISFD-QTGKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 204 RDKTIKVWDLSIKPSLEYSINTIASVSRIKW----RP-QRKFHLASCSLVVDSSVNVWDI 258
RDKT+K+W+++ Y + T +W RP Q LASCS D +V VW +
Sbjct: 212 RDKTMKMWEVATG----YCVKTFTG--HREWVRMVRPNQDGTLLASCSN--DQTVRVWVV 263
Query: 259 RRPYIPLASFTEHKDVVSGLAW 280
A EH+ VV ++W
Sbjct: 264 ATKECK-AELREHEHVVECISW 284
Score = 140 (54.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 33/104 (31%), Positives = 60/104 (57%)
Query: 112 WLISGSQDGTMRLFDIR---CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQW 168
+L+SGS+D T++++DI C T + H N VR V F+P + S +++ T++ W
Sbjct: 310 FLLSGSRDKTIKMWDISTGMCL-MTLVGHDNW--VRGVLFHPGGRFV-VSCADDKTLRIW 365
Query: 169 DVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
D + ++C +AH + + D+H ++ T S D+T+KVW+
Sbjct: 366 DYKN-KRCMKTLSAHEHFVTSLDFHKASPYVVTGSVDQTVKVWE 408
Score = 134 (52.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 41/171 (23%), Positives = 72/171 (42%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ + + + + VW+ ER H +V +SF L S S D T++L+D
Sbjct: 123 MVSASEDATIKVWDY---EAGDFERTLKGHTDSVQDISFDQT-GKLLASCSADMTIKLWD 178
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ E + H + +V V P+ + S S + T++ W+V C FT H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTMKMWEVATGY-CVKTFTGHREW 236
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQ 237
+ + + LA+ S D+T++VW ++ K V I W P+
Sbjct: 237 VRMVRPNQDGTLLASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Score = 124 (48.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 38/128 (29%), Positives = 61/128 (47%)
Query: 166 QQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINT 225
++W R PEK Y + H P+ +HP + + +AS D TIKVWD E ++
Sbjct: 92 KEWIPRPPEK--YALSGHRSPVTRVIFHPVFSLMVSASEDATIKVWDYEAG-DFERTLKG 148
Query: 226 IA-SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDP 284
SV I + K LASCS D ++ +WD + + + + H VS +A +
Sbjct: 149 HTDSVQDISFDQTGKL-LASCS--ADMTIKLWDFQG-FECIRTMHGHDHNVSSVAIMPNG 204
Query: 285 QLFIASSR 292
+++SR
Sbjct: 205 DHIVSASR 212
>POMBASE|SPBC354.03 [details] [associations]
symbol:swd3 "WD repeat protein Swd3" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IC] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IC]
[GO:0006342 "chromatin silencing" evidence=IC] [GO:0048188
"Set1C/COMPASS complex" evidence=IDA] [GO:0051568 "histone H3-K4
methylation" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC354.03 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CU329671_GR GO:GO:0006338 GO:GO:0000790 GO:GO:0006342
GO:GO:0048188 GO:GO:0051568 PIR:T40283 RefSeq:NP_595227.1
ProteinModelPortal:O43017 STRING:O43017 EnsemblFungi:SPBC354.03.1
GeneID:2540929 KEGG:spo:SPBC354.03 KO:K14963 OrthoDB:EOG49CTJ0
NextBio:20802044 Uniprot:O43017
Length = 380
Score = 194 (73.4 bits), Expect = 4.8e-13, P = 4.8e-13
Identities = 55/215 (25%), Positives = 105/215 (48%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
IAT +++G + +W+ ++ + +F H R +++V + S +L S S D T+R++D
Sbjct: 69 IATSSSDGTIKIWSA--LTFRLECTLFG-HYRGISQVKWA-TGSKYLASASDDKTIRIWD 124
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ S + +T V ++FNP S S + T++ W+++ C AHS P
Sbjct: 125 FEKRCSVRCLKGHTNYVSSIDFNPLGTL-LVSGSWDETVRIWNLQ-DGTCLRMLPAHSEP 182
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTI-ASVSRIKWRPQRKFHLASC 245
I + + ATAS D ++WD+ L+ + I +S +++ RK+ L S
Sbjct: 183 IISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTENRKYLLVSN 242
Query: 246 SLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAW 280
++S + +WD RR + + F H + ++W
Sbjct: 243 ---LNSQIRLWDYRRNRV-VRIFDSHVNTRYSMSW 273
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 29/119 (24%), Positives = 59/119 (49%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYA 155
H+++V VS W+ + S DGT++++ + + V++ S Y
Sbjct: 53 HEKSVTCVSVS-PNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKY- 110
Query: 156 FASVSENGTIQQWDVRRPEKCFYQ-FTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
AS S++ TI+ WD + +C + H+ + + D++P L + S D+T+++W+L
Sbjct: 111 LASASDDKTIRIWDFEK--RCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNL 167
>UNIPROTKB|G4MTU3 [details] [associations]
symbol:MGG_04802 "Periodic tryptophan protein 1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0043581 "mycelium development" evidence=IEP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043581
EMBL:CM001232 KO:K14791 RefSeq:XP_003713739.1
ProteinModelPortal:G4MTU3 EnsemblFungi:MGG_04802T0 GeneID:2677755
KEGG:mgr:MGG_04802 Uniprot:G4MTU3
Length = 551
Score = 197 (74.4 bits), Expect = 5.2e-13, P = 5.2e-13
Identities = 65/225 (28%), Positives = 104/225 (46%)
Query: 46 KNINLNFSCNDVAWSCIEENH---IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNK 102
K +N F + V H +A+ + + V +W+L + +K + + H V
Sbjct: 267 KKVNDEFHVDAVLALAANRKHRNLLASASADKTVKLWDL---NTTKCAKSYKYHTDKVCS 323
Query: 103 VSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTES-VRDVEFNPHSPYAFASVSE 161
V++H VES L+SGS D T+ D+R ++ K+ ES V +V ++PH P F +E
Sbjct: 324 VAWHPVESTVLLSGSYDRTIVAADMRAPDA-KVPRWGVESDVENVRWDPHDPNFFFVSTE 382
Query: 162 NGTIQQWDVRR-PE-----KCFYQFTAHSGPIFACDWHPE-HAWLATASRDKTIKVWDLS 214
NG I +DVR P K + AH I + D +P ++ T S DKT+K+W++
Sbjct: 383 NGLIHYYDVRNAPSDPATSKATWTLQAHDESISSFDINPVIPGFMVTGSTDKTVKLWNIQ 442
Query: 215 IK-PSLEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWD 257
PS+ S N + V + P + +V VWD
Sbjct: 443 ESGPSMIVSRNLDVGKVFSTSFAPDAEVGFRLSVAGSKGTVTVWD 487
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 194 (73.4 bits), Expect = 6.1e-13, P = 6.1e-13
Identities = 60/212 (28%), Positives = 93/212 (43%)
Query: 57 VAWSCIEENHIATGATNGAVVVW--NLGQ-IS-RSKQERVFNDHKRTVNKVSFHYVESNW 112
++WS E H+ T +G + W N Q IS + + F H VSFH + +
Sbjct: 177 MSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHNFV 236
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR 172
S D + L+D+R + +T V + FNP S Y A+ S + T+ WD+R
Sbjct: 237 FGSVGDDRKLNLWDLRQSKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRN 296
Query: 173 PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSIKPSLEYSINTIASVSR 231
K Y H+ IF + P + LA++ D + VWD+S + S ++ AS
Sbjct: 297 MRKKMYTLKHHNDEIFQVSFSPHYETVLASSGSDDRVIVWDIS--KIQDPSSSSAASSDS 354
Query: 232 IKWRPQRKF-HLASCSLVVDSSVNVWDIRRPY 262
+ P+ F H V D S W+ RP+
Sbjct: 355 VP--PEVIFIHAGHTGKVADFS---WNPNRPW 381
Score = 136 (52.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 47/184 (25%), Positives = 84/184 (45%)
Query: 103 VSFHYVESNWLISGSQDGTMRLFDIRCQE--STKI-----FHSNTESVRDVEFNPHSPYA 155
+S+ L++ DG + +DI + S +I F ++ + DV F+ +
Sbjct: 177 MSWSNTREGHLLTAGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHNFV 236
Query: 156 FASVSENGTIQQWDVRRPEKCFYQFTA--HSGPIFACDWHPEHAW-LATASRDKTIKVWD 212
F SV ++ + WD+R+ + Q TA H+ + ++P + LAT S DKT+ +WD
Sbjct: 237 FGSVGDDRKLNLWDLRQSKP---QLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWD 293
Query: 213 LSIKPSLEYSI-NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEH 271
+ Y++ + + ++ + P + LAS D V VWDI + P +S
Sbjct: 294 MRNMRKKMYTLKHHNDEIFQVSFSPHYETVLASSGS--DDRVIVWDISKIQDPSSSSAAS 351
Query: 272 KDVV 275
D V
Sbjct: 352 SDSV 355
Score = 126 (49.4 bits), Expect = 3.8e-05, P = 3.8e-05
Identities = 37/153 (24%), Positives = 65/153 (42%)
Query: 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTK--IFH 137
NL + +SK + H VN ++F+ L +GS D T+ L+D+R + H
Sbjct: 247 NLWDLRQSKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTLKH 306
Query: 138 SNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR---------------PEKCFYQFTA 182
N E + V F+PH AS + + WD+ + P + +
Sbjct: 307 HNDE-IFQVSFSPHYETVLASSGSDDRVIVWDISKIQDPSSSSAASSDSVPPEVIFIHAG 365
Query: 183 HSGPIFACDWHPEHAWLATASRD-KTIKVWDLS 214
H+G + W+P W +S + ++VW++S
Sbjct: 366 HTGKVADFSWNPNRPWTICSSDEFNALQVWEVS 398
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 194 (73.4 bits), Expect = 6.7e-13, P = 6.7e-13
Identities = 55/225 (24%), Positives = 101/225 (44%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNL-GQISRSK---QERVFNDHKRTVNKVSFHYVESNW 112
++W+ ++ + + + + +W++ G K + +F H V VS+H + +
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
S + D + ++D R ++K HS +T V + FNP+S + A+ S + T+ WD
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 302
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSIKPSLEYSINTI-- 226
+R + + F +H IF W P + LA++ D+ + VWDLS K E S
Sbjct: 303 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLS-KIGEEQSAEDAED 361
Query: 227 -------------ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A +S W P + + CS+ D+ + VW +
Sbjct: 362 GPPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQVWQM 404
Score = 161 (61.7 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 49/176 (27%), Positives = 86/176 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF +T V DV +
Sbjct: 176 HQKEGYGLSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSW 235
Query: 149 NPHSPYAFASVSENGTIQQWDVR--RPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 206 KTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL ++K L + + +++W P + LAS D +NVWD+ +
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLNVWDLSK 349
Score = 159 (61.0 bits), Expect = 7.5e-09, P = 7.5e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV+W + E+ + A + +++W+ + SK + H VN +SF+ L +
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT 291
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V+++PH+ AS + + WD+ +
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D ++VW ++
Sbjct: 352 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
Score = 152 (58.6 bits), Expect = 4.7e-08, P = 4.7e-08
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL 199
+ +NP+ S S++ TI WD+ K FT H+ + WH H L
Sbjct: 183 LSWNPNLSGNLLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 200 -ATASRDKTIKVWDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
+ + D+ + +WD + KPS +T A V+ + + P +F LA+ S D +V
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHSVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVA 299
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+WD+R + L SF HKD + + W + +ASS
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 193 (73.0 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 55/227 (24%), Positives = 103/227 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNL------GQISRSKQERVFNDHKRTVNKVSFHYVES 110
++W+ H+ + + + V +W++ G+I +K +F H V V++H +
Sbjct: 173 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA--IFTGHSAVVEDVAWHLLHE 230
Query: 111 NWLISGSQDGTMRLFDIRCQESTKIFH---SNTESVRDVEFNPHSPYAFASVSENGTIQQ 167
+ S + D + ++D R ++K H ++T V + FNP+S + A+ S + T+
Sbjct: 231 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 290
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSIKPSLEYSINTI 226
WD+R + + F +H IF W P + LA++ D+ + VWDLS K E S
Sbjct: 291 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS-KIGEEQSAEDA 349
Query: 227 ---------------ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A +S W P + + CS+ D+ + +W +
Sbjct: 350 EDGPPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQIWQM 394
Score = 163 (62.4 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW + E+ + A + +++W+ + SK + + H VN +SF+ L +
Sbjct: 222 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 281
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V ++PH+ AS + + WD+ +
Sbjct: 282 GSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 341
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D +++W ++
Sbjct: 342 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 395
Score = 154 (59.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 49/179 (27%), Positives = 87/179 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF ++ V DV +
Sbjct: 166 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 225
Query: 149 NPHSPYAFASVSENGTIQQWDVRR--PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 226 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 285
Query: 206 KTIKVWDLSIKPSLEYSINTIAS----VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL +L+ ++T S + ++ W P + LAS D +NVWD+ +
Sbjct: 286 KTVALWDLR---NLKLKLHTFESHKDEIFQVHWSPHNETILASSG--TDRRLNVWDLSK 339
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 42/145 (28%), Positives = 68/145 (46%)
Query: 158 SVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL-ATASRDKTIKV 210
S S++ T+ WD+ K FT HS + WH H L + + D+ + +
Sbjct: 185 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 244
Query: 211 WDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266
WD + KPS +T A V+ + + P +F LA+ S D +V +WD+R + L
Sbjct: 245 WDTRSNTTSKPSHLVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLH 301
Query: 267 SFTEHKDVVSGLAWRGDPQLFIASS 291
+F HKD + + W + +ASS
Sbjct: 302 TFESHKDEIFQVHWSPHNETILASS 326
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 193 (73.0 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 55/227 (24%), Positives = 103/227 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNL------GQISRSKQERVFNDHKRTVNKVSFHYVES 110
++W+ H+ + + + V +W++ G+I +K +F H V V++H +
Sbjct: 173 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA--IFTGHSAVVEDVAWHLLHE 230
Query: 111 NWLISGSQDGTMRLFDIRCQESTKIFH---SNTESVRDVEFNPHSPYAFASVSENGTIQQ 167
+ S + D + ++D R ++K H ++T V + FNP+S + A+ S + T+
Sbjct: 231 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 290
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSIKPSLEYSINTI 226
WD+R + + F +H IF W P + LA++ D+ + VWDLS K E S
Sbjct: 291 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS-KIGEEQSAEDA 349
Query: 227 ---------------ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A +S W P + + CS+ D+ + +W +
Sbjct: 350 EDGPPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQIWQM 394
Score = 163 (62.4 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW + E+ + A + +++W+ + SK + + H VN +SF+ L +
Sbjct: 222 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 281
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V ++PH+ AS + + WD+ +
Sbjct: 282 GSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 341
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D +++W ++
Sbjct: 342 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 395
Score = 154 (59.3 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 49/179 (27%), Positives = 87/179 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF ++ V DV +
Sbjct: 166 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 225
Query: 149 NPHSPYAFASVSENGTIQQWDVRR--PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 226 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 285
Query: 206 KTIKVWDLSIKPSLEYSINTIAS----VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL +L+ ++T S + ++ W P + LAS D +NVWD+ +
Sbjct: 286 KTVALWDLR---NLKLKLHTFESHKDEIFQVHWSPHNETILASSG--TDRRLNVWDLSK 339
Score = 139 (54.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 42/145 (28%), Positives = 68/145 (46%)
Query: 158 SVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL-ATASRDKTIKV 210
S S++ T+ WD+ K FT HS + WH H L + + D+ + +
Sbjct: 185 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 244
Query: 211 WDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266
WD + KPS +T A V+ + + P +F LA+ S D +V +WD+R + L
Sbjct: 245 WDTRSNTTSKPSHLVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLH 301
Query: 267 SFTEHKDVVSGLAWRGDPQLFIASS 291
+F HKD + + W + +ASS
Sbjct: 302 TFESHKDEIFQVHWSPHNETILASS 326
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 193 (73.0 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 36/162 (22%), Positives = 79/162 (48%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSK---QERVFNDHKRTVNKVSFHYVESNWL 113
+AWS +E ++ +G+ + + +W++ + K V+ H+ + V++H N
Sbjct: 175 LAWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIF 234
Query: 114 ISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRP 173
S D + ++D+R + + + + FNP + + A+ S + T+ +D+R+
Sbjct: 235 GSAGDDCQLVIWDLRTNQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKL 294
Query: 174 EKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
+ + H G +F +W P H LA++ D+ + VWD++
Sbjct: 295 TAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDIN 336
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 45/177 (25%), Positives = 84/177 (47%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW EN + + +V+W+L Q +V H+R +N +SF+ + W+++
Sbjct: 223 DVAWHMKNENIFGSAGDDCQLVIWDLRTNQMQHQVKV---HEREINYLSFNPF-NEWVLA 278
Query: 116 -GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR- 172
S D T+ LFD+R + + V VE++P+ AS E+ + WD+ R
Sbjct: 279 TASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRV 338
Query: 173 -PEKCFYQFTAHSGP---IFA--------CD--WHPEHAW-LATASRDKTIKVWDLS 214
E+ + A GP +F+ D W+ + W +++ + D +++VW ++
Sbjct: 339 GDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMA 395
Score = 151 (58.2 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 52/216 (24%), Positives = 99/216 (45%)
Query: 61 CIEENHIATGA-TNGA-VVVWNLGQISRSKQERVFND------HKRTVNKVSFHYVESNW 112
C+ + GA T+G+ V +++ ++S Q + H++ +++ + +
Sbjct: 125 CMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTSECDPDLRLMGHEQEGYGLAWSSFKEGY 184
Query: 113 LISGSQDGTMRLFDIRCQESTKI------FHSNTESVRDVEFNPHSPYAFASVSENGTIQ 166
L+SGSQD + L+D+ + K+ + + + DV ++ + F S ++ +
Sbjct: 185 LLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLV 244
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDL-SIKPSLEYSIN 224
WD+R + +Q H I ++P + W LATAS D T+ ++DL + L
Sbjct: 245 IWDLRT-NQMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTAPLHVLSK 303
Query: 225 TIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
V +++W P + LAS D + VWDI R
Sbjct: 304 HEGEVFQVEWDPNHETVLASSG--EDRRLMVWDINR 337
Score = 123 (48.4 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 45/173 (26%), Positives = 72/173 (41%)
Query: 135 IFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHP 194
++ + + DV ++ + F S ++ + WD+R + +Q H I ++P
Sbjct: 213 VYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVIWDLRT-NQMQHQVKVHEREINYLSFNP 271
Query: 195 EHAW-LATASRDKTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSS 252
+ W LATAS D T+ ++DL + L V +++W P + LAS D
Sbjct: 272 FNEWVLATASSDSTVALFDLRKLTAPLHVLSKHEGEVFQVEWDPNHETVLASSG--EDRR 329
Query: 253 VNVWDIRR---------------PYIPLASFTEHKDVVSGLAWRGDPQLFIAS 290
+ VWDI R P L S HK +S AW D I+S
Sbjct: 330 LMVWDINRVGDEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISS 382
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 193 (73.0 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 55/227 (24%), Positives = 103/227 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNL------GQISRSKQERVFNDHKRTVNKVSFHYVES 110
++W+ H+ + + + V +W++ G+I +K +F H V V++H +
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA--IFTGHSAVVEDVAWHLLHE 239
Query: 111 NWLISGSQDGTMRLFDIRCQESTKIFH---SNTESVRDVEFNPHSPYAFASVSENGTIQQ 167
+ S + D + ++D R ++K H ++T V + FNP+S + A+ S + T+
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSIKPSLEYSINTI 226
WD+R + + F +H IF W P + LA++ D+ + VWDLS K E S
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS-KIGEEQSAEDA 358
Query: 227 ---------------ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A +S W P + + CS+ D+ + +W +
Sbjct: 359 EDGPPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQIWQM 403
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW + E+ + A + +++W+ + SK + + H VN +SF+ L +
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V ++PH+ AS + + WD+ +
Sbjct: 291 GSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D +++W ++
Sbjct: 351 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
Score = 154 (59.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 49/179 (27%), Positives = 87/179 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF ++ V DV +
Sbjct: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 234
Query: 149 NPHSPYAFASVSENGTIQQWDVRR--PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 206 KTIKVWDLSIKPSLEYSINTIAS----VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL +L+ ++T S + ++ W P + LAS D +NVWD+ +
Sbjct: 295 KTVALWDLR---NLKLKLHTFESHKDEIFQVHWSPHNETILASSG--TDRRLNVWDLSK 348
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 42/145 (28%), Positives = 68/145 (46%)
Query: 158 SVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL-ATASRDKTIKV 210
S S++ T+ WD+ K FT HS + WH H L + + D+ + +
Sbjct: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 253
Query: 211 WDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266
WD + KPS +T A V+ + + P +F LA+ S D +V +WD+R + L
Sbjct: 254 WDTRSNTTSKPSHLVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLH 310
Query: 267 SFTEHKDVVSGLAWRGDPQLFIASS 291
+F HKD + + W + +ASS
Sbjct: 311 TFESHKDEIFQVHWSPHNETILASS 335
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 193 (73.0 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 55/227 (24%), Positives = 103/227 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNL------GQISRSKQERVFNDHKRTVNKVSFHYVES 110
++W+ H+ + + + V +W++ G+I +K +F H V V++H +
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA--IFTGHSAVVEDVAWHLLHE 239
Query: 111 NWLISGSQDGTMRLFDIRCQESTKIFH---SNTESVRDVEFNPHSPYAFASVSENGTIQQ 167
+ S + D + ++D R ++K H ++T V + FNP+S + A+ S + T+
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSIKPSLEYSINTI 226
WD+R + + F +H IF W P + LA++ D+ + VWDLS K E S
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS-KIGEEQSAEDA 358
Query: 227 ---------------ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A +S W P + + CS+ D+ + +W +
Sbjct: 359 EDGPPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQIWQM 403
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW + E+ + A + +++W+ + SK + + H VN +SF+ L +
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V ++PH+ AS + + WD+ +
Sbjct: 291 GSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D +++W ++
Sbjct: 351 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
Score = 154 (59.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 49/179 (27%), Positives = 87/179 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF ++ V DV +
Sbjct: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 234
Query: 149 NPHSPYAFASVSENGTIQQWDVRR--PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 206 KTIKVWDLSIKPSLEYSINTIAS----VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL +L+ ++T S + ++ W P + LAS D +NVWD+ +
Sbjct: 295 KTVALWDLR---NLKLKLHTFESHKDEIFQVHWSPHNETILASSG--TDRRLNVWDLSK 348
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 42/145 (28%), Positives = 68/145 (46%)
Query: 158 SVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL-ATASRDKTIKV 210
S S++ T+ WD+ K FT HS + WH H L + + D+ + +
Sbjct: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 253
Query: 211 WDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266
WD + KPS +T A V+ + + P +F LA+ S D +V +WD+R + L
Sbjct: 254 WDTRSNTTSKPSHLVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLH 310
Query: 267 SFTEHKDVVSGLAWRGDPQLFIASS 291
+F HKD + + W + +ASS
Sbjct: 311 TFESHKDEIFQVHWSPHNETILASS 335
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 193 (73.0 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 55/227 (24%), Positives = 103/227 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNL------GQISRSKQERVFNDHKRTVNKVSFHYVES 110
++W+ H+ + + + V +W++ G+I +K +F H V V++H +
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA--IFTGHSAVVEDVAWHLLHE 239
Query: 111 NWLISGSQDGTMRLFDIRCQESTKIFH---SNTESVRDVEFNPHSPYAFASVSENGTIQQ 167
+ S + D + ++D R ++K H ++T V + FNP+S + A+ S + T+
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSIKPSLEYSINTI 226
WD+R + + F +H IF W P + LA++ D+ + VWDLS K E S
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS-KIGEEQSAEDA 358
Query: 227 ---------------ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A +S W P + + CS+ D+ + +W +
Sbjct: 359 EDGPPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQIWQM 403
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW + E+ + A + +++W+ + SK + + H VN +SF+ L +
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V ++PH+ AS + + WD+ +
Sbjct: 291 GSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D +++W ++
Sbjct: 351 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
Score = 154 (59.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 49/179 (27%), Positives = 87/179 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF ++ V DV +
Sbjct: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 234
Query: 149 NPHSPYAFASVSENGTIQQWDVRR--PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 206 KTIKVWDLSIKPSLEYSINTIAS----VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL +L+ ++T S + ++ W P + LAS D +NVWD+ +
Sbjct: 295 KTVALWDLR---NLKLKLHTFESHKDEIFQVHWSPHNETILASSG--TDRRLNVWDLSK 348
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 42/145 (28%), Positives = 68/145 (46%)
Query: 158 SVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL-ATASRDKTIKV 210
S S++ T+ WD+ K FT HS + WH H L + + D+ + +
Sbjct: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 253
Query: 211 WDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266
WD + KPS +T A V+ + + P +F LA+ S D +V +WD+R + L
Sbjct: 254 WDTRSNTTSKPSHLVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLH 310
Query: 267 SFTEHKDVVSGLAWRGDPQLFIASS 291
+F HKD + + W + +ASS
Sbjct: 311 TFESHKDEIFQVHWSPHNETILASS 335
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 193 (73.0 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 55/227 (24%), Positives = 103/227 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNL------GQISRSKQERVFNDHKRTVNKVSFHYVES 110
++W+ H+ + + + V +W++ G+I +K +F H V V++H +
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA--IFTGHSAVVEDVAWHLLHE 239
Query: 111 NWLISGSQDGTMRLFDIRCQESTKIFH---SNTESVRDVEFNPHSPYAFASVSENGTIQQ 167
+ S + D + ++D R ++K H ++T V + FNP+S + A+ S + T+
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSIKPSLEYSINTI 226
WD+R + + F +H IF W P + LA++ D+ + VWDLS K E S
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS-KIGEEQSAEDA 358
Query: 227 ---------------ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A +S W P + + CS+ D+ + +W +
Sbjct: 359 EDGPPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQIWQM 403
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW + E+ + A + +++W+ + SK + + H VN +SF+ L +
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V ++PH+ AS + + WD+ +
Sbjct: 291 GSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D +++W ++
Sbjct: 351 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
Score = 154 (59.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 49/179 (27%), Positives = 87/179 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF ++ V DV +
Sbjct: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 234
Query: 149 NPHSPYAFASVSENGTIQQWDVRR--PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 206 KTIKVWDLSIKPSLEYSINTIAS----VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL +L+ ++T S + ++ W P + LAS D +NVWD+ +
Sbjct: 295 KTVALWDLR---NLKLKLHTFESHKDEIFQVHWSPHNETILASSG--TDRRLNVWDLSK 348
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 42/145 (28%), Positives = 68/145 (46%)
Query: 158 SVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL-ATASRDKTIKV 210
S S++ T+ WD+ K FT HS + WH H L + + D+ + +
Sbjct: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 253
Query: 211 WDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266
WD + KPS +T A V+ + + P +F LA+ S D +V +WD+R + L
Sbjct: 254 WDTRSNTTSKPSHLVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLH 310
Query: 267 SFTEHKDVVSGLAWRGDPQLFIASS 291
+F HKD + + W + +ASS
Sbjct: 311 TFESHKDEIFQVHWSPHNETILASS 335
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 193 (73.0 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 55/227 (24%), Positives = 103/227 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNL------GQISRSKQERVFNDHKRTVNKVSFHYVES 110
++W+ H+ + + + V +W++ G+I +K +F H V V++H +
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA--IFTGHSAVVEDVAWHLLHE 239
Query: 111 NWLISGSQDGTMRLFDIRCQESTKIFH---SNTESVRDVEFNPHSPYAFASVSENGTIQQ 167
+ S + D + ++D R ++K H ++T V + FNP+S + A+ S + T+
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSIKPSLEYSINTI 226
WD+R + + F +H IF W P + LA++ D+ + VWDLS K E S
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS-KIGEEQSAEDA 358
Query: 227 ---------------ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A +S W P + + CS+ D+ + +W +
Sbjct: 359 EDGPPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQIWQM 403
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW + E+ + A + +++W+ + SK + + H VN +SF+ L +
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V ++PH+ AS + + WD+ +
Sbjct: 291 GSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D +++W ++
Sbjct: 351 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
Score = 154 (59.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 49/179 (27%), Positives = 87/179 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF ++ V DV +
Sbjct: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 234
Query: 149 NPHSPYAFASVSENGTIQQWDVRR--PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 206 KTIKVWDLSIKPSLEYSINTIAS----VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL +L+ ++T S + ++ W P + LAS D +NVWD+ +
Sbjct: 295 KTVALWDLR---NLKLKLHTFESHKDEIFQVHWSPHNETILASSG--TDRRLNVWDLSK 348
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 42/145 (28%), Positives = 68/145 (46%)
Query: 158 SVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL-ATASRDKTIKV 210
S S++ T+ WD+ K FT HS + WH H L + + D+ + +
Sbjct: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 253
Query: 211 WDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266
WD + KPS +T A V+ + + P +F LA+ S D +V +WD+R + L
Sbjct: 254 WDTRSNTTSKPSHLVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLH 310
Query: 267 SFTEHKDVVSGLAWRGDPQLFIASS 291
+F HKD + + W + +ASS
Sbjct: 311 TFESHKDEIFQVHWSPHNETILASS 335
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 193 (73.0 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 55/227 (24%), Positives = 103/227 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNL------GQISRSKQERVFNDHKRTVNKVSFHYVES 110
++W+ H+ + + + V +W++ G+I +K +F H V V++H +
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA--IFTGHSAVVEDVAWHLLHE 239
Query: 111 NWLISGSQDGTMRLFDIRCQESTKIFH---SNTESVRDVEFNPHSPYAFASVSENGTIQQ 167
+ S + D + ++D R ++K H ++T V + FNP+S + A+ S + T+
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSIKPSLEYSINTI 226
WD+R + + F +H IF W P + LA++ D+ + VWDLS K E S
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS-KIGEEQSAEDA 358
Query: 227 ---------------ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A +S W P + + CS+ D+ + +W +
Sbjct: 359 EDGPPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQIWQM 403
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW + E+ + A + +++W+ + SK + + H VN +SF+ L +
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V ++PH+ AS + + WD+ +
Sbjct: 291 GSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D +++W ++
Sbjct: 351 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
Score = 154 (59.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 49/179 (27%), Positives = 87/179 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF ++ V DV +
Sbjct: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 234
Query: 149 NPHSPYAFASVSENGTIQQWDVRR--PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 206 KTIKVWDLSIKPSLEYSINTIAS----VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL +L+ ++T S + ++ W P + LAS D +NVWD+ +
Sbjct: 295 KTVALWDLR---NLKLKLHTFESHKDEIFQVHWSPHNETILASSG--TDRRLNVWDLSK 348
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 42/145 (28%), Positives = 68/145 (46%)
Query: 158 SVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL-ATASRDKTIKV 210
S S++ T+ WD+ K FT HS + WH H L + + D+ + +
Sbjct: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 253
Query: 211 WDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266
WD + KPS +T A V+ + + P +F LA+ S D +V +WD+R + L
Sbjct: 254 WDTRSNTTSKPSHLVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLH 310
Query: 267 SFTEHKDVVSGLAWRGDPQLFIASS 291
+F HKD + + W + +ASS
Sbjct: 311 TFESHKDEIFQVHWSPHNETILASS 335
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 193 (73.0 bits), Expect = 8.7e-13, P = 8.7e-13
Identities = 55/227 (24%), Positives = 103/227 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNL------GQISRSKQERVFNDHKRTVNKVSFHYVES 110
++W+ H+ + + + V +W++ G+I +K +F H V V++H +
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA--IFTGHSAVVEDVAWHLLHE 239
Query: 111 NWLISGSQDGTMRLFDIRCQESTKIFH---SNTESVRDVEFNPHSPYAFASVSENGTIQQ 167
+ S + D + ++D R ++K H ++T V + FNP+S + A+ S + T+
Sbjct: 240 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSIKPSLEYSINTI 226
WD+R + + F +H IF W P + LA++ D+ + VWDLS K E S
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS-KIGEEQSAEDA 358
Query: 227 ---------------ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A +S W P + + CS+ D+ + +W +
Sbjct: 359 EDGPPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQIWQM 403
Score = 163 (62.4 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW + E+ + A + +++W+ + SK + + H VN +SF+ L +
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V ++PH+ AS + + WD+ +
Sbjct: 291 GSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 350
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D +++W ++
Sbjct: 351 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 404
Score = 154 (59.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 49/179 (27%), Positives = 87/179 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF ++ V DV +
Sbjct: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 234
Query: 149 NPHSPYAFASVSENGTIQQWDVRR--PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 235 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 206 KTIKVWDLSIKPSLEYSINTIAS----VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL +L+ ++T S + ++ W P + LAS D +NVWD+ +
Sbjct: 295 KTVALWDLR---NLKLKLHTFESHKDEIFQVHWSPHNETILASSG--TDRRLNVWDLSK 348
Score = 139 (54.0 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 42/145 (28%), Positives = 68/145 (46%)
Query: 158 SVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL-ATASRDKTIKV 210
S S++ T+ WD+ K FT HS + WH H L + + D+ + +
Sbjct: 194 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 253
Query: 211 WDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266
WD + KPS +T A V+ + + P +F LA+ S D +V +WD+R + L
Sbjct: 254 WDTRSNTTSKPSHLVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLH 310
Query: 267 SFTEHKDVVSGLAWRGDPQLFIASS 291
+F HKD + + W + +ASS
Sbjct: 311 TFESHKDEIFQVHWSPHNETILASS 335
>UNIPROTKB|Q13610 [details] [associations]
symbol:PWP1 "Periodic tryptophan protein 1 homolog"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=TAS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:CH471054 GO:GO:0006351 CTD:11137 HOGENOM:HOG000212580
HOVERGEN:HBG001543 KO:K14791 OMA:RGVAKET OrthoDB:EOG4STS4J
EMBL:L07758 EMBL:AK290681 IPI:IPI00014298 PIR:I39360
RefSeq:NP_008993.1 UniGene:Hs.506652 ProteinModelPortal:Q13610
SMR:Q13610 IntAct:Q13610 STRING:Q13610 PhosphoSite:Q13610
DMDM:2494897 PaxDb:Q13610 PeptideAtlas:Q13610 PRIDE:Q13610
DNASU:11137 Ensembl:ENST00000412830 GeneID:11137 KEGG:hsa:11137
UCSC:uc001tmo.1 GeneCards:GC12P108079 HGNC:HGNC:17015 HPA:HPA038707
neXtProt:NX_Q13610 PharmGKB:PA142671112 InParanoid:Q13610
PhylomeDB:Q13610 ChiTaRS:PWP1 GenomeRNAi:11137 NextBio:42336
ArrayExpress:Q13610 Bgee:Q13610 CleanEx:HS_PWP1
Genevestigator:Q13610 GermOnline:ENSG00000136045 Uniprot:Q13610
Length = 501
Score = 194 (73.4 bits), Expect = 9.8e-13, P = 9.8e-13
Identities = 52/170 (30%), Positives = 88/170 (51%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
D++W+ + N +A+ + + V++W++ S K H V + FH E+ LIS
Sbjct: 261 DLSWNKLIRNVLASASADNTVILWDM---SLGKPAASLAVHTDKVQTLQFHPFEAQTLIS 317
Query: 116 GSQDGTMRLFDIRC-QESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPE 174
GS D ++ L+D R ES +++ + + R V +N SP F + +++G + D R +
Sbjct: 318 GSYDKSVALYDCRSPDESHRMWRFSGQIER-VTWNHFSPCHFLASTDDGFVYNLDARS-D 375
Query: 175 KCFYQFTAHSGPIFACDWHPE-HAWLATASRDKTIKVWD-LSIKPSLEYS 222
K + AH+ I D + L TAS DK +K+WD L +PSL +S
Sbjct: 376 KPIFTLNAHNDEISGLDLSSQIKGCLVTASADKYVKIWDILGDRPSLVHS 425
>ZFIN|ZDB-GENE-040116-2 [details] [associations]
symbol:pafah1b1a "platelet-activating factor
acetylhydrolase, isoform Ib, alpha subunit a" species:7955 "Danio
rerio" [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0048854 "brain
morphogenesis" evidence=IGI;IMP] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040116-2 GO:GO:0005737
GO:GO:0030154 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005815
InterPro:IPR013720 Pfam:PF08513 GO:GO:0005874 GO:GO:0048854
EMBL:DQ141217 EMBL:BX324162 EMBL:BC053205 IPI:IPI00500448
RefSeq:NP_958502.1 UniGene:Dr.140597 ProteinModelPortal:Q7T394
SMR:Q7T394 STRING:Q7T394 PRIDE:Q7T394 Ensembl:ENSDART00000042218
GeneID:394246 KEGG:dre:394246 CTD:394246
GeneTree:ENSGT00700000104282 HOGENOM:HOG000184015
HOVERGEN:HBG006271 KO:K01062 OMA:WVRGLAF OrthoDB:EOG4P5K93
NextBio:20815155 Bgee:Q7T394 HAMAP:MF_03141 InterPro:IPR017252
PANTHER:PTHR22847:SF51 PIRSF:PIRSF037647 Uniprot:Q7T394
Length = 410
Score = 192 (72.6 bits), Expect = 1.0e-12, P = 1.0e-12
Identities = 57/201 (28%), Positives = 97/201 (48%)
Query: 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV 143
I R ++ + H+ V +V FH V S ++S S+D T++++D + + +T+SV
Sbjct: 95 IPRPPEKYALSGHRSPVTRVIFHPVFSV-IVSASEDATIKVWDHETGDFERTLKGHTDSV 153
Query: 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS 203
+D+ F+ H+ AS S + TI+ WD + E C H + + P + +AS
Sbjct: 154 QDISFD-HTGKLLASCSADMTIKLWDFQGFE-CIRTMHGHDHNVSSVAIMPNGDHIVSAS 211
Query: 204 RDKTIKVWDLSIKPSLEYSINTIASVSRIKW----RPQRKFHLASCSLVVDSSVNVWDIR 259
RDKTIK+W+++ Y + T +W RP + L + S D +V VW +
Sbjct: 212 RDKTIKMWEVATG----YCVKTFTG--HREWVRMVRPNQDGTLIASSSN-DQTVRVWVVA 264
Query: 260 RPYIPLASFTEHKDVVSGLAW 280
A EH+ VV ++W
Sbjct: 265 TKECK-AELREHEHVVECISW 284
Score = 140 (54.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 42/171 (24%), Positives = 74/171 (43%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
I + + + + VW+ ER H +V +SF + L S S D T++L+D
Sbjct: 123 IVSASEDATIKVWDH---ETGDFERTLKGHTDSVQDISFDHT-GKLLASCSADMTIKLWD 178
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ E + H + +V V P+ + S S + TI+ W+V C FT H
Sbjct: 179 FQGFECIRTMHGHDHNVSSVAIMPNGDH-IVSASRDKTIKMWEVATGY-CVKTFTGHREW 236
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQ 237
+ + + +A++S D+T++VW ++ K V I W P+
Sbjct: 237 VRMVRPNQDGTLIASSSNDQTVRVWVVATKECKAELREHEHVVECISWAPE 287
Score = 134 (52.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 32/104 (30%), Positives = 59/104 (56%)
Query: 112 WLISGSQDGTMRLFDIR---CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQW 168
+L+SGS+D T++++D+ C T + H N VR V +P Y S +++ T++ W
Sbjct: 310 FLLSGSRDKTIKMWDVSIGMCL-MTLVGHDNW--VRGVLVHPGGKY-IVSCADDKTLRIW 365
Query: 169 DVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
D + ++C +AH + + D+H ++ T S D+T+KVW+
Sbjct: 366 DYKN-KRCTKTLSAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 408
Score = 123 (48.4 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 45/167 (26%), Positives = 73/167 (43%)
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
IR Q+ S ++ E N P + + ++W R PEK Y + H P
Sbjct: 59 IRLQKKVMELESKLNEAKE-EINIGGP-----IGQKRDPKEWIPRPPEK--YALSGHRSP 110
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHLASC 245
+ +HP + + +AS D TIKVWD E ++ SV I + K LASC
Sbjct: 111 VTRVIFHPVFSVIVSASEDATIKVWDHETG-DFERTLKGHTDSVQDISFDHTGKL-LASC 168
Query: 246 SLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSR 292
S D ++ +WD + + + + H VS +A + +++SR
Sbjct: 169 S--ADMTIKLWDFQG-FECIRTMHGHDHNVSSVAIMPNGDHIVSASR 212
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 193 (73.0 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 55/227 (24%), Positives = 103/227 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNL------GQISRSKQERVFNDHKRTVNKVSFHYVES 110
++W+ H+ + + + V +W++ G+I +K +F H V V++H +
Sbjct: 226 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA--IFTGHSAVVEDVAWHLLHE 283
Query: 111 NWLISGSQDGTMRLFDIRCQESTKIFH---SNTESVRDVEFNPHSPYAFASVSENGTIQQ 167
+ S + D + ++D R ++K H ++T V + FNP+S + A+ S + T+
Sbjct: 284 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 343
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSIKPSLEYSINTI 226
WD+R + + F +H IF W P + LA++ D+ + VWDLS K E S
Sbjct: 344 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS-KIGEEQSAEDA 402
Query: 227 ---------------ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A +S W P + + CS+ D+ + +W +
Sbjct: 403 EDGPPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQIWQM 447
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW + E+ + A + +++W+ + SK + + H VN +SF+ L +
Sbjct: 275 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 334
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V ++PH+ AS + + WD+ +
Sbjct: 335 GSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 394
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D +++W ++
Sbjct: 395 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 448
Score = 154 (59.3 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 49/179 (27%), Positives = 87/179 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF ++ V DV +
Sbjct: 219 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 278
Query: 149 NPHSPYAFASVSENGTIQQWDVRR--PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 279 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 338
Query: 206 KTIKVWDLSIKPSLEYSINTIAS----VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL +L+ ++T S + ++ W P + LAS D +NVWD+ +
Sbjct: 339 KTVALWDLR---NLKLKLHTFESHKDEIFQVHWSPHNETILASSG--TDRRLNVWDLSK 392
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 42/145 (28%), Positives = 68/145 (46%)
Query: 158 SVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL-ATASRDKTIKV 210
S S++ T+ WD+ K FT HS + WH H L + + D+ + +
Sbjct: 238 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 297
Query: 211 WDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266
WD + KPS +T A V+ + + P +F LA+ S D +V +WD+R + L
Sbjct: 298 WDTRSNTTSKPSHLVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLH 354
Query: 267 SFTEHKDVVSGLAWRGDPQLFIASS 291
+F HKD + + W + +ASS
Sbjct: 355 TFESHKDEIFQVHWSPHNETILASS 379
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 193 (73.0 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 55/227 (24%), Positives = 103/227 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNL------GQISRSKQERVFNDHKRTVNKVSFHYVES 110
++W+ H+ + + + V +W++ G+I +K +F H V V++H +
Sbjct: 226 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA--IFTGHSAVVEDVAWHLLHE 283
Query: 111 NWLISGSQDGTMRLFDIRCQESTKIFH---SNTESVRDVEFNPHSPYAFASVSENGTIQQ 167
+ S + D + ++D R ++K H ++T V + FNP+S + A+ S + T+
Sbjct: 284 SLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 343
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSIKPSLEYSINTI 226
WD+R + + F +H IF W P + LA++ D+ + VWDLS K E S
Sbjct: 344 WDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLS-KIGEEQSAEDA 402
Query: 227 ---------------ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A +S W P + + CS+ D+ + +W +
Sbjct: 403 EDGPPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQIWQM 447
Score = 163 (62.4 bits), Expect = 3.2e-09, P = 3.2e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW + E+ + A + +++W+ + SK + + H VN +SF+ L +
Sbjct: 275 DVAWHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 334
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V ++PH+ AS + + WD+ +
Sbjct: 335 GSADKTVALWDLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG 394
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D +++W ++
Sbjct: 395 EEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 448
Score = 154 (59.3 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 49/179 (27%), Positives = 87/179 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF ++ V DV +
Sbjct: 219 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAW 278
Query: 149 NPHSPYAFASVSENGTIQQWDVRR--PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 279 HLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 338
Query: 206 KTIKVWDLSIKPSLEYSINTIAS----VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL +L+ ++T S + ++ W P + LAS D +NVWD+ +
Sbjct: 339 KTVALWDLR---NLKLKLHTFESHKDEIFQVHWSPHNETILASSG--TDRRLNVWDLSK 392
Score = 139 (54.0 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 42/145 (28%), Positives = 68/145 (46%)
Query: 158 SVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL-ATASRDKTIKV 210
S S++ T+ WD+ K FT HS + WH H L + + D+ + +
Sbjct: 238 SASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMI 297
Query: 211 WDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266
WD + KPS +T A V+ + + P +F LA+ S D +V +WD+R + L
Sbjct: 298 WDTRSNTTSKPSHLVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLH 354
Query: 267 SFTEHKDVVSGLAWRGDPQLFIASS 291
+F HKD + + W + +ASS
Sbjct: 355 TFESHKDEIFQVHWSPHNETILASS 379
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 192 (72.6 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 60/227 (26%), Positives = 113/227 (49%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLF- 125
+ATG+ + +++W+L +R+ + + HK + V F + N L S S+D T+RL+
Sbjct: 33 LATGSWDTFLMLWSLRPQARAFR---YVGHKDVITSVQFSPL-GNLLASASRDRTIRLWI 88
Query: 126 -DIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHS 184
D R + S F ++T VR V+F+ + AS SE+ +I+ W++ R ++ Y H+
Sbjct: 89 PDKRGKSSE--FKAHTAPVRSVDFSADGQF-LASASEDKSIKVWNMYR-QRFLYSLYRHT 144
Query: 185 GPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLAS 244
+ + P+ + + S DKTIK+WD + K + + + + + + P +AS
Sbjct: 145 HWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDFVGFANFVAFNPNGTC-IAS 203
Query: 245 CSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
D +V +WDIR + L + H V+ +++ I +S
Sbjct: 204 AGS--DHTVKIWDIRVNKL-LQHYQVHSGGVNCVSFHPSGNYLITAS 247
Score = 177 (67.4 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 51/169 (30%), Positives = 84/169 (49%)
Query: 90 ERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFN 149
ER F HK + V F L +GS D + L+ +R Q + + + + V+F+
Sbjct: 11 ERYFKGHKAAITSVDFS-PNGKQLATGSWDTFLMLWSLRPQARAFRYVGHKDVITSVQFS 69
Query: 150 PHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIK 209
P AS S + TI+ W + K +F AH+ P+ + D+ + +LA+AS DK+IK
Sbjct: 70 PLGNL-LASASRDRTIRLWIPDKRGKSS-EFKAHTAPVRSVDFSADGQFLASASEDKSIK 127
Query: 210 VWDLSIKPSLEYSINTIASVSRI-KWRPQRKFHLASCSLVVDSSVNVWD 257
VW++ + L YS+ R K+ P + + SCS D ++ +WD
Sbjct: 128 VWNMYRQRFL-YSLYRHTHWVRCAKFSPDGRL-IVSCS--EDKTIKIWD 172
Score = 156 (60.0 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 44/195 (22%), Positives = 94/195 (48%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
N +A+ + + + +W + +S + F H V V F + +L S S+D ++++
Sbjct: 73 NLLASASRDRTIRLWIPDKRGKSSE---FKAHTAPVRSVDFS-ADGQFLASASEDKSIKV 128
Query: 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHS 184
+++ Q + +T VR +F+P S SE+ TI+ WD ++C F+
Sbjct: 129 WNMYRQRFLYSLYRHTHWVRCAKFSPDGRL-IVSCSEDKTIKIWDTTN-KQCVNNFSDFV 186
Query: 185 GPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE-YSINTIASVSRIKWRPQRKFHLA 243
G ++P +A+A D T+K+WD+ + L+ Y +++ V+ + + P + +
Sbjct: 187 GFANFVAFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHS-GGVNCVSFHPSGNYLIT 245
Query: 244 SCSLVVDSSVNVWDI 258
+ S D ++ + D+
Sbjct: 246 ASS---DGTLKILDL 257
Score = 150 (57.9 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 41/159 (25%), Positives = 79/159 (49%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRT--VNKVSFHYVESNWLISGSQDGTMRL 124
+A+ + + ++ VWN+ +Q +++ ++ T V F + ++S S+D T+++
Sbjct: 117 LASASEDKSIKVWNM-----YRQRFLYSLYRHTHWVRCAKFS-PDGRLIVSCSEDKTIKI 170
Query: 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHS 184
+D ++ F V FNP+ AS + T++ WD+R K + HS
Sbjct: 171 WDTTNKQCVNNFSDFVGFANFVAFNPNGT-CIASAGSDHTVKIWDIR-VNKLLQHYQVHS 228
Query: 185 GPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI 223
G + +HP +L TAS D T+K+ DL ++ L Y++
Sbjct: 229 GGVNCVSFHPSGNYLITASSDGTLKILDL-LEGRLIYTL 266
>UNIPROTKB|Q5RD06 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9601 "Pongo abelii" [GO:0005814 "centriole" evidence=ISS]
[GO:0005932 "microtubule basal body" evidence=ISS] [GO:0042384
"cilium assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
HOVERGEN:HBG057502 KO:K16482 CTD:282809 EMBL:CR858112
RefSeq:NP_001125169.1 UniGene:Pab.14153 ProteinModelPortal:Q5RD06
GeneID:100172056 KEGG:pon:100172056 Uniprot:Q5RD06
Length = 451
Score = 191 (72.3 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 62/228 (27%), Positives = 112/228 (49%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLF- 125
+AT + + +++WN +R+ + + HK V V F N L S S+D T+RL+
Sbjct: 33 LATASWDTFLMLWNFKPHARAYR---YVGHKDVVTSVQFS-PHGNLLASASRDRTVRLWI 88
Query: 126 -DIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHS 184
D R + S F ++T VR V+F+ + A+ SE+ +I+ W + R ++ Y H+
Sbjct: 89 PDKRGKFSE--FKAHTAPVRSVDFSADGQF-LATASEDKSIKVWSMYR-QRFLYSLYRHT 144
Query: 185 GPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLAS 244
+ + P+ + + S DKTIK+WD + K + +++ + + + P +AS
Sbjct: 145 HWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTC-IAS 203
Query: 245 CSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWR-GDPQLFIASS 291
D +V VWD+R + L + H V+ +++ D L ASS
Sbjct: 204 AGS--DQTVKVWDVRVNKL-LQHYQVHSGGVNCISFHPSDNYLVTASS 248
Score = 175 (66.7 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 49/169 (28%), Positives = 82/169 (48%)
Query: 90 ERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFN 149
ER F HK + + L + S D + L++ + + + + V V+F+
Sbjct: 11 ERYFKGHKAAITSLDLS-PNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69
Query: 150 PHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIK 209
PH AS S + T++ W + K F +F AH+ P+ + D+ + +LATAS DK+IK
Sbjct: 70 PHGNL-LASASRDRTVRLWIPDKRGK-FSEFKAHTAPVRSVDFSADGQFLATASEDKSIK 127
Query: 210 VWDLSIKPSLEYSINTIASVSRI-KWRPQRKFHLASCSLVVDSSVNVWD 257
VW + + L YS+ R K+ P + + SCS D ++ +WD
Sbjct: 128 VWSMYRQRFL-YSLYRHTHWVRCAKFSPDGRL-IVSCS--EDKTIKIWD 172
Score = 160 (61.4 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 43/159 (27%), Positives = 81/159 (50%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRT--VNKVSFHYVESNWLISGSQDGTMRL 124
+AT + + ++ VW++ +Q +++ ++ T V F + ++S S+D T+++
Sbjct: 117 LATASEDKSIKVWSM-----YRQRFLYSLYRHTHWVRCAKFS-PDGRLIVSCSEDKTIKI 170
Query: 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHS 184
+D ++ F + V+FNP S AS + T++ WDVR K + HS
Sbjct: 171 WDTTNKQCVNNFSDSVGFANFVDFNP-SGTCIASAGSDQTVKVWDVR-VNKLLQHYQVHS 228
Query: 185 GPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI 223
G + +HP +L TAS D T+K+ DL ++ L Y++
Sbjct: 229 GGVNCISFHPSDNYLVTASSDGTLKILDL-LEGRLIYTL 266
Score = 158 (60.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 48/195 (24%), Positives = 94/195 (48%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
N +A+ + + V +W + R K F H V V F + +L + S+D ++++
Sbjct: 73 NLLASASRDRTVRLWIPDK--RGKFSE-FKAHTAPVRSVDFS-ADGQFLATASEDKSIKV 128
Query: 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHS 184
+ + Q + +T VR +F+P S SE+ TI+ WD ++C F+
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRL-IVSCSEDKTIKIWDTTN-KQCVNNFSDSV 186
Query: 185 GPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE-YSINTIASVSRIKWRPQRKFHLA 243
G D++P +A+A D+T+KVWD+ + L+ Y +++ V+ I + P + +
Sbjct: 187 GFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHS-GGVNCISFHPSDNYLVT 245
Query: 244 SCSLVVDSSVNVWDI 258
+ S D ++ + D+
Sbjct: 246 ASS---DGTLKILDL 257
>ZFIN|ZDB-GENE-040426-1049 [details] [associations]
symbol:pwp1 "PWP1 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-1049
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
CTD:11137 GeneTree:ENSGT00390000017324 HOGENOM:HOG000212580
HOVERGEN:HBG001543 KO:K14791 OMA:RGVAKET OrthoDB:EOG4STS4J
EMBL:CU571163 EMBL:BC049457 IPI:IPI00497637 RefSeq:NP_956586.1
UniGene:Dr.79178 STRING:Q7ZWE1 Ensembl:ENSDART00000003790
GeneID:393262 KEGG:dre:393262 InParanoid:Q7ZWE1 NextBio:20814321
Uniprot:Q7ZWE1
Length = 490
Score = 191 (72.3 bits), Expect = 2.1e-12, P = 2.1e-12
Identities = 52/170 (30%), Positives = 87/170 (51%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
D++W+ + N +A+ + + V++W+L + K H V + FH E+ LIS
Sbjct: 259 DLSWNRLVRNVLASASADETVILWDL---EKGKPAATLAKHTDKVQTLKFHPFEAQTLIS 315
Query: 116 GSQDGTMRLFDIRC-QESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPE 174
GS D ++ L+D R +S +I+ + + V V ++ SP F + +E+G I D R +
Sbjct: 316 GSFDKSVILYDCRSPDDSHRIWRFSGQ-VERVTWDHFSPCNFLASTEDGFIYCLDARS-D 373
Query: 175 KCFYQFTAHSGPIFACDWHPE-HAWLATASRDKTIKVWD-LSIKPSLEYS 222
K + AH G + D + L T S DK +K+WD L KP+L +S
Sbjct: 374 KPVFTLRAHDGEVSGMDLSSQIRGCLVTCSADKHVKIWDILGNKPNLIHS 423
>TAIR|locus:2158232 [details] [associations]
symbol:HOS15 "high expression of osmotically responsive
genes 15" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005834 "heterotrimeric G-protein complex"
evidence=ISS] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0009409 "response to cold" evidence=IMP]
[GO:0016575 "histone deacetylation" evidence=IMP] [GO:0000956
"nuclear-transcribed mRNA catabolic process" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
deneddylation" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0016579
"protein deubiquitination" evidence=RCA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0005634
EMBL:CP002688 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009409 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 EMBL:AB007645 GO:GO:0016575
HSSP:P16649 GO:GO:0080008 HOGENOM:HOG000220902 OMA:LANNHAD
EMBL:AY057698 EMBL:AY143932 IPI:IPI00531489 RefSeq:NP_201533.1
UniGene:At.6493 ProteinModelPortal:Q9FN19 SMR:Q9FN19 STRING:Q9FN19
PRIDE:Q9FN19 EnsemblPlants:AT5G67320.1 GeneID:836867
KEGG:ath:AT5G67320 TAIR:At5g67320 InParanoid:Q9FN19
PhylomeDB:Q9FN19 ProtClustDB:CLSN2687044 Genevestigator:Q9FN19
Uniprot:Q9FN19
Length = 613
Score = 192 (72.6 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 63/255 (24%), Positives = 119/255 (46%)
Query: 45 GKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNL-GQISRSKQERVFNDHKRTVNKV 103
GK+ + + W+ E +ATG+ +G +W L G++ + + HK + +
Sbjct: 318 GKSNEKSKDVTTLDWNG-EGTLLATGSCDGQARIWTLNGELIST-----LSKHKGPIFSL 371
Query: 104 SFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENG 163
++ + ++L++GS D T ++D++ +E + F ++ DV++ + +A +S
Sbjct: 372 KWNK-KGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDSMI 430
Query: 164 TIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI 223
+ + RP K F T H G + W P + LA+ S D T K+W++ +
Sbjct: 431 YLCKIGETRPAKTF---TGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLR 487
Query: 224 NTIASVSRIKW--------RPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVV 275
+ I+W P ++ LAS S DS+V +WD + L SF H++ V
Sbjct: 488 EHTKEIYTIRWSPTGPGTNNPNKQLTLASASF--DSTVKLWDAELGKM-LCSFNGHREPV 544
Query: 276 SGLAWRGDPQLFIAS 290
LA+ + + +IAS
Sbjct: 545 YSLAFSPNGE-YIAS 558
Score = 154 (59.3 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 50/213 (23%), Positives = 94/213 (44%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV W AT +T+ + + +G+ ++ + F H+ VN V + S L S
Sbjct: 412 DVDWR--NNVSFATSSTDSMIYLCKIGE---TRPAKTFTGHQGEVNCVKWDPTGS-LLAS 465
Query: 116 GSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSP--------YAFASVSENGTIQQ 167
S D T ++++I+ +T+ + + ++P P AS S + T++
Sbjct: 466 CSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKL 525
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE-YSINTI 226
WD K F H P+++ + P ++A+ S DK+I +W + ++ Y+ N
Sbjct: 526 WDAELG-KMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGN-- 582
Query: 227 ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIR 259
+ + W + +A+C D+SV V D R
Sbjct: 583 GGIFEVCWNKEGN-KIAAC--FADNSVCVLDFR 612
>DICTYBASE|DDB_G0276481 [details] [associations]
symbol:ercc8 "DNA excision repair protein 8"
species:44689 "Dictyostelium discoideum" [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=ISS]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0276481 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000015 GO:GO:0006283 KO:K10570
eggNOG:NOG271357 RefSeq:XP_643081.1 ProteinModelPortal:Q551N8
STRING:Q551N8 EnsemblProtists:DDB0232366 GeneID:8620485
KEGG:ddi:DDB_G0276481 InParanoid:Q551N8 OMA:HVYETAT
ProtClustDB:CLSZ2494971 Uniprot:Q551N8
Length = 513
Score = 160 (61.4 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 43/135 (31%), Positives = 70/135 (51%)
Query: 55 NDVAWSCIEENHIATGATNGAVVVW--NLGQISRSKQERVFNDHKRTVNKVSFHYVE-SN 111
+ V W I+ G NG V VW NLGQ+S++ F + VN +S+ V +N
Sbjct: 120 SSVQWYPIDTGIFFIGGVNGNVEVWDTNLGQVSQT-----FY-LENCVNSISYSQVNCTN 173
Query: 112 WLISGSQ-DGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDV 170
LI+ + D +RL D+R S + ESV ++++P SP A+ S++ TI+ WD+
Sbjct: 174 LLIAAATTDPKVRLCDMRTNSSVHCLTGHRESVLSIKWSPFSPNLIATASKDKTIRLWDI 233
Query: 171 RRPEKCFYQFTAHSG 185
RR + + ++G
Sbjct: 234 RRGDTFLFALDQYNG 248
Score = 89 (36.4 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 28/122 (22%), Positives = 53/122 (43%)
Query: 141 ESVRDVEFNPHSPYAFASVSENGTIQQWDVR--RPEKCFYQFTAHSGPIFACDWHPEHAW 198
+ + V++ P F NG ++ WD + + FY + ++ + +
Sbjct: 117 KGISSVQWYPIDTGIFFIGGVNGNVEVWDTNLGQVSQTFYLENCVNSISYS-QVNCTNLL 175
Query: 199 LATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
+A A+ D +++ D+ S+ SV IKW P +A+ S D ++ +WDI
Sbjct: 176 IAAATTDPKVRLCDMRTNSSVHCLTGHRESVLSIKWSPFSPNLIATASK--DKTIRLWDI 233
Query: 259 RR 260
RR
Sbjct: 234 RR 235
Score = 74 (31.1 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 181 TAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
TAH+G I + W P+ +L + D I++WD+
Sbjct: 329 TAHNGTITSIAWTPDGNYLVSTGADSKIRLWDI 361
Score = 63 (27.2 bits), Expect = 0.00057, Sum P(3) = 0.00057
Identities = 11/48 (22%), Positives = 28/48 (58%)
Query: 80 NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDI 127
++ + S +++ N +K +N + E+ +L+S S DG ++++D+
Sbjct: 26 SIRHLDLSVYKQIINYNKGPINHLDIDVAENRYLLSVSGDGIIQIYDL 73
Score = 53 (23.7 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 212 DLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
+L++K + + N +++ I W P + L S DS + +WDI++
Sbjct: 320 NLTLKKEVPTAHN--GTITSIAWTPDGNY-LVSTG--ADSKIRLWDIQK 363
Score = 45 (20.9 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 13/52 (25%), Positives = 26/52 (50%)
Query: 269 TEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIKIFIASSRVSIIPRAENI 320
T H ++ +AW D +++ S I R +I+ A++ ++ P A N+
Sbjct: 329 TAHNGTITSIAWTPDGNYLVSTGADSKI-RLWDIQKGGANTMINY-PNAHNV 378
>UNIPROTKB|C9J8B4 [details] [associations]
symbol:WDR33 "pre-mRNA 3' end-processing protein WDR33"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 EMBL:AC006011
HGNC:HGNC:25651 HOGENOM:HOG000126810 ChiTaRS:WDR33 IPI:IPI00917459
ProteinModelPortal:C9J8B4 SMR:C9J8B4 Ensembl:ENST00000436787
ArrayExpress:C9J8B4 Bgee:C9J8B4 Uniprot:C9J8B4
Length = 205
Score = 169 (64.5 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 43/167 (25%), Positives = 80/167 (47%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
V W+ E + TGA++G +WN G E + H V +++ + + W+++
Sbjct: 47 VRWTP-EGRRLVTGASSGEFTLWN-GLTFNF--ETILQAHDSPVRAMTWSHNDM-WMLTA 101
Query: 117 SQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
G ++ + + K+F ++ E++R+ F+P + FA+ S++GT++ WD R C
Sbjct: 102 DHGGYVKYWQSN-MNNVKMFQAHKEAIREASFSP-TDNKFATCSDDGTVRIWDFLR---C 156
Query: 177 FYQ--FTAHSGPIFACDWHPEHAWLATASRD--KTIKVWDLSIKPSL 219
+ H + DWHP + + S+D + IK WD SL
Sbjct: 157 HEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSL 203
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 189 (71.6 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 51/224 (22%), Positives = 101/224 (45%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQ----ERVFNDHKRTVNKVSFHYVESNW 112
++W+ + + + + + +W++ + + + + +F H V VS+H + +
Sbjct: 183 LSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
S + D + ++D R ++K H+ +T V + FNP+S + A+ S + T+ WD
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 302
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSI------------- 215
+R + + F +H IF W P + LA++ D+ + VWDLS
Sbjct: 303 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDG 362
Query: 216 KPSLEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
P L + A +S W P + + CS+ D+ + VW +
Sbjct: 363 PPELLFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQVWQM 404
Score = 162 (62.1 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 49/176 (27%), Positives = 86/176 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ IF +T V DV +
Sbjct: 176 HQKEGYGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSW 235
Query: 149 NPHSPYAFASVSENGTIQQWDVR--RPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSAD 295
Query: 206 KTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL ++K L + + +++W P + LAS D +NVWD+ +
Sbjct: 296 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLNVWDLSK 349
Score = 161 (61.7 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 40/174 (22%), Positives = 79/174 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV+W + E+ + A + +++W+ + SK + H VN +SF+ L +
Sbjct: 232 DVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILAT 291
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V+++PH+ AS + + WD+ +
Sbjct: 292 GSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIG 351
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D ++VW ++
Sbjct: 352 EEQSPEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 405
Score = 153 (58.9 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 45/157 (28%), Positives = 73/157 (46%)
Query: 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL 199
+ +NP+ S S++ TI WD+ K FT H+ + WH H L
Sbjct: 183 LSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESL 242
Query: 200 -ATASRDKTIKVWDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
+ + D+ + +WD + KPS +T A V+ + + P +F LA+ S D +V
Sbjct: 243 FGSVADDQKLMIWDTRSNNTSKPSHAVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVA 299
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+WD+R + L SF HKD + + W + +ASS
Sbjct: 300 LWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 336
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 188 (71.2 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 54/221 (24%), Positives = 94/221 (42%)
Query: 57 VAWSCIEENHIATGATNGAVVVW----NLGQISRSKQERVFNDHKRTVNKVSFHYVESNW 112
++W+ +E I + + + V W N G K +F H+ V V++H +
Sbjct: 178 LSWNPNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAWHVLHDGV 237
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR 172
S D + ++D+R +++ V + FNP+S + A+ S + T+ WD+R
Sbjct: 238 FGSVGDDKKLLIWDLRTNVPGHAIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRN 297
Query: 173 PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSI-------------KPS 218
+ F +H IF W P + LA++ DK + VWDLS P
Sbjct: 298 LRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQTAEDAEDGPPE 357
Query: 219 LEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
L + A +S W P + + CS+ D+ + VW +
Sbjct: 358 LLFIHGGHTAKISDFSWNPNEPWVV--CSVSEDNILQVWQM 396
Score = 141 (54.7 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 42/161 (26%), Positives = 72/161 (44%)
Query: 139 NTESVRDVEFNPHSPYAFASVSENGTIQQWDVR-----RPE-KCFYQFTAHSGPIFACDW 192
+T+ + +NP+ S S++ T+ WD+ E K F H + W
Sbjct: 171 HTKEGYGLSWNPNKEGLILSASDDQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAW 230
Query: 193 HPEHAWL-ATASRDKTIKVWDLSIK-PSLEYSINTIASVSRIKWRPQRKFHLASCSLVVD 250
H H + + DK + +WDL P ++ A V+ + + P +F LA+ S D
Sbjct: 231 HVLHDGVFGSVGDDKKLLIWDLRTNVPGHAIDAHS-AEVNCLAFNPYSEFILATGS--AD 287
Query: 251 SSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+V +WD+R + L SF H+D + + W + +ASS
Sbjct: 288 KTVALWDLRNLRLKLHSFESHRDEIFQVQWSPHNETILASS 328
Score = 138 (53.6 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 37/174 (21%), Positives = 76/174 (43%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW + + + + +++W+L + + H VN ++F+ L +
Sbjct: 227 DVAWHVLHDGVFGSVGDDKKLLIWDL---RTNVPGHAIDAHSAEVNCLAFNPYSEFILAT 283
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V+++PH+ AS + + WD+ +
Sbjct: 284 GSADKTVALWDLRNLRLKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIG 343
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAWLA-TASRDKTIKVWDLS 214
P + + H+ I W+P W+ + S D ++VW ++
Sbjct: 344 EDQTAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMA 397
>RGD|2323942 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B (Chlamydomonas)"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0042384 "cilium assembly" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:2323942 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OrthoDB:EOG41VK2R IPI:IPI00387818
ProteinModelPortal:D3ZW91 Ensembl:ENSRNOT00000031905
UCSC:RGD:2323942 ArrayExpress:D3ZW91 Uniprot:D3ZW91
Length = 477
Score = 189 (71.6 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 55/225 (24%), Positives = 110/225 (48%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
IAT + + +++W+L +R+ + + HK V + F + N L S S+D T+RL+
Sbjct: 33 IATASWDTFLMLWSLKPHARAYR---YVGHKDVVTSLQFS-PQGNLLASASRDKTVRLWV 88
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ + + F ++T VR V+F+ + + SE+ +I+ W + R ++ Y H+
Sbjct: 89 LDRKGKSSEFKAHTAPVRSVDFSADGQF-LVTASEDKSIKVWSMYR-QRFLYSLYRHTHW 146
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCS 246
+ + P+ + + S DKTIK+WD + K + +++ + + + P +AS
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTSKQCVNNFSDSVGFANFVDFSPNGTC-IASAG 205
Query: 247 LVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
D +V +WDIR + L + H V+ L++ + +S
Sbjct: 206 S--DHAVRIWDIRMNRL-LQHYQVHSCGVNCLSFHPSGNSLVTAS 247
Score = 163 (62.4 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 46/169 (27%), Positives = 80/169 (47%)
Query: 90 ERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFN 149
ER F HK + F + + S D + L+ ++ + + + V ++F+
Sbjct: 11 ERYFKGHKAAITSADFS-PNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFS 69
Query: 150 PHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIK 209
P AS S + T++ W + R K +F AH+ P+ + D+ + +L TAS DK+IK
Sbjct: 70 PQGNL-LASASRDKTVRLWVLDRKGKSS-EFKAHTAPVRSVDFSADGQFLVTASEDKSIK 127
Query: 210 VWDLSIKPSLEYSINTIASVSRI-KWRPQRKFHLASCSLVVDSSVNVWD 257
VW + + L YS+ R K+ P + + SCS D ++ +WD
Sbjct: 128 VWSMYRQRFL-YSLYRHTHWVRCAKFSPDGRL-IVSCS--EDKTIKIWD 172
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/159 (22%), Positives = 77/159 (48%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRT--VNKVSFHYVESNWLISGSQDGTMRL 124
+ T + + ++ VW++ +Q +++ ++ T V F + ++S S+D T+++
Sbjct: 117 LVTASEDKSIKVWSM-----YRQRFLYSLYRHTHWVRCAKFS-PDGRLIVSCSEDKTIKI 170
Query: 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHS 184
+D ++ F + V+F+P+ AS + ++ WD+R + + HS
Sbjct: 171 WDTTSKQCVNNFSDSVGFANFVDFSPNGT-CIASAGSDHAVRIWDIRM-NRLLQHYQVHS 228
Query: 185 GPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI 223
+ +HP L TAS D T+K+ DL ++ L Y++
Sbjct: 229 CGVNCLSFHPSGNSLVTASSDGTVKILDL-VEGRLIYTL 266
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 189 (71.6 bits), Expect = 3.4e-12, P = 3.4e-12
Identities = 47/186 (25%), Positives = 86/186 (46%)
Query: 59 WSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQ 118
WS +ATG N ++ V N + + + F H +V + + E S S
Sbjct: 258 WSPKIAGRLATGDCNNSIFVTNASESTWKTDTQAFKGHTESVEDIQWSPSEEKVFASCSI 317
Query: 119 DGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR--RPEKC 176
D T+R++DIR + ++T V + ++ + Y S ++G+ + WD+R +
Sbjct: 318 DQTVRIWDIRKPKPAITVKAHTADVNVISWSRNVEYLLVSGCDDGSFRVWDLRAFKDNSP 377
Query: 177 FYQFTAHSGPIFACDWHP-EHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSR-IKW 234
F H+GPI + +W+P E + + +S D + +WD S++ E N A+ ++
Sbjct: 378 VSDFKYHTGPITSIEWNPYEESQVIVSSSDDQVTIWDFSLEEDTEEFTNANANPDDDFQY 437
Query: 235 RPQRKF 240
PQ F
Sbjct: 438 PPQLFF 443
Score = 166 (63.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 49/181 (27%), Positives = 84/181 (46%)
Query: 48 INLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQ-ISRSKQERVFNDHKRTVNKVSFH 106
IN N + N + + N +AT + N +V +WN+ + E V ++ +S H
Sbjct: 190 INHNGAVNRIRSMDQQSNIVATWSDNRSVYIWNIANHLKALDNETVAPKQTAPLHTISNH 249
Query: 107 YVES---NWL--ISG---SQDGTMRLFDIRCQEST-----KIFHSNTESVRDVEFNPHSP 153
+E +W I+G + D +F EST + F +TESV D++++P
Sbjct: 250 SIEGYALDWSPKIAGRLATGDCNNSIFVTNASESTWKTDTQAFKGHTESVEDIQWSPSEE 309
Query: 154 YAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDK-TIKVWD 212
FAS S + T++ WD+R+P+ AH+ + W +L + D + +VWD
Sbjct: 310 KVFASCSIDQTVRIWDIRKPKPAI-TVKAHTADVNVISWSRNVEYLLVSGCDDGSFRVWD 368
Query: 213 L 213
L
Sbjct: 369 L 369
Score = 120 (47.3 bits), Expect = 0.00023, P = 0.00023
Identities = 40/134 (29%), Positives = 63/134 (47%)
Query: 183 HSGPIFACDWHPEHAW-LATASRDKTIKVWDLSI---KPSLEYSINTIASVSRIKWRPQR 238
HS +A DW P+ A LAT + +I V + S K + SV I+W P
Sbjct: 249 HSIEGYALDWSPKIAGRLATGDCNNSIFVTNASESTWKTDTQAFKGHTESVEDIQWSPSE 308
Query: 239 KFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPR 298
+ ASCS +D +V +WDIR+P P + H V+ ++W + + + S R
Sbjct: 309 EKVFASCS--IDQTVRIWDIRKPK-PAITVKAHTADVNVISWSRNVEYLLVSGCDDGSFR 365
Query: 299 AKNIKIFIASSRVS 312
+++ F +S VS
Sbjct: 366 VWDLRAFKDNSPVS 379
>ZFIN|ZDB-GENE-030131-5143 [details] [associations]
symbol:prpf4 "PRP4 pre-mRNA processing factor 4
homolog (yeast)" species:7955 "Danio rerio" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR003648 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SMART:SM00500 ZFIN:ZDB-GENE-030131-5143 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 InterPro:IPR027106 PANTHER:PTHR19846
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
CTD:9128 GeneTree:ENSGT00690000101787 HOVERGEN:HBG030892
OMA:CKIWDLR OrthoDB:EOG45DWP9 EMBL:BX510338 EMBL:CR925761
EMBL:CU652834 EMBL:BC056720 EMBL:BC154322 IPI:IPI00488410
RefSeq:NP_956049.1 RefSeq:XP_002662201.1 UniGene:Dr.76045
SMR:Q6PH45 STRING:Q6PH45 Ensembl:ENSDART00000097395
Ensembl:ENSDART00000111950 GeneID:100334455 GeneID:326944
KEGG:dre:100334455 KEGG:dre:326944 InParanoid:Q6PH45
NextBio:20809805 Uniprot:Q6PH45
Length = 507
Score = 189 (71.6 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 69/270 (25%), Positives = 124/270 (45%)
Query: 27 KIFLIKDTEFVETHNLRVGKNINLN-FSCNDVAWSCIEENHI--ATGATNGAVVVWNLGQ 83
K++ + D + T LR G N N+ S + A +EE+ + A+ A +G+V +W+L
Sbjct: 241 KLWKVPDCTLIRT--LR-GHNTNVGAISFHPQATLTLEESDVNMASCAADGSVKLWSLDS 297
Query: 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV 143
+ H V +V++H +L + D + RL+D+ QE +++ V
Sbjct: 298 ---DEPIADIEGHSMRVARVTWH-PSGRFLGTTCYDHSWRLWDLEVQEEILHQEGHSKGV 353
Query: 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS 203
D+ F+P A + + + WD+R +C H I++ ++ P +AT S
Sbjct: 354 HDLHFHPDGSLA-GTGGLDSFARVWDLRTG-RCVMFLEGHIKEIYSINFSPNGFHVATGS 411
Query: 204 RDKTIKVWDLSIKPSLEYSINTIAS-VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRP- 261
D KVWDL + + Y+I + VS +K++P +L + + D++ +W P
Sbjct: 412 GDNACKVWDLRQRRCI-YTIPAHQNLVSSVKFQPNDGHYLLTGAY--DNTAKIWT--HPG 466
Query: 262 YIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+ PL + H+ V G+ D QL S
Sbjct: 467 WSPLKTLAGHEGKVMGVDLSPDGQLIATCS 496
Score = 115 (45.5 bits), Expect = 0.00088, P = 0.00088
Identities = 35/157 (22%), Positives = 64/157 (40%)
Query: 110 SNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPH-------SPYAFASVSEN 162
S L++ S G +L+ + + + +V + F+P S AS + +
Sbjct: 228 SKLLVTASWSGLCKLWKVPDCTLIRTLRGHNTNVGAISFHPQATLTLEESDVNMASCAAD 287
Query: 163 GTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYS 222
G+++ W + E HS + WHP +L T D + ++WDL ++ + +
Sbjct: 288 GSVKLWSLDSDEP-IADIEGHSMRVARVTWHPSGRFLGTTCYDHSWRLWDLEVQEEILHQ 346
Query: 223 INTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIR 259
V + + P LA +DS VWD+R
Sbjct: 347 EGHSKGVHDLHFHPDGS--LAGTG-GLDSFARVWDLR 380
>UNIPROTKB|E9PFC6 [details] [associations]
symbol:POC1A "POC1 centriolar protein homolog A"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:AC115284
CTD:25886 KO:K16482 RefSeq:NP_001155053.1 UniGene:Hs.476306
GeneID:25886 KEGG:hsa:25886 HGNC:HGNC:24488 GenomeRNAi:25886
NextBio:47308 EMBL:AC097637 IPI:IPI00936600
ProteinModelPortal:E9PFC6 SMR:E9PFC6 Ensembl:ENST00000474012
ArrayExpress:E9PFC6 Bgee:E9PFC6 Uniprot:E9PFC6
Length = 369
Score = 186 (70.5 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 63/272 (23%), Positives = 125/272 (45%)
Query: 52 FSCNDVAWSCIE---ENHI-ATGATNGAVVVWNLGQISRSKQER-VFNDHKRTVNKVSFH 106
F+ + A +C+ H+ A+G+ + V +W + K E VF H TV V F
Sbjct: 19 FTGHKDAVTCVNFSPSGHLLASGSRDKTVRIW----VPNVKGESTVFRAHTATVRSVHF- 73
Query: 107 YVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQ 166
+ ++ S D T++++ Q+ + VR +F+P S S++ T++
Sbjct: 74 CSDGQSFVTASDDKTVKVWATHRQKFLFSLSQHINWVRCAKFSPDGRL-IVSASDDKTVK 132
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE-YSINT 225
WD + +C + + H G + D+HP +A A D T+KVWD+ L+ Y +++
Sbjct: 133 LWD-KSSRECVHSYCEHGGFVTYVDFHPSGTCIAAAGMDNTVKVWDVRTHRLLQHYQLHS 191
Query: 226 IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQ 285
A+V+ + + P + + + S DS++ + D+ + L + H+ + +A+ +
Sbjct: 192 -AAVNGLSFHPSGNYLITASS---DSTLKILDLMEGRL-LYTLHGHQGPATTVAFSRTGE 246
Query: 286 LFIAS-SRVSIIPRAKNIKIFIASSRVSIIPR 316
F + S ++ N I + V+ +PR
Sbjct: 247 YFASGGSDEQVMVWKSNFDI-VDHGEVTKVPR 277
Score = 114 (45.2 bits), Expect = 0.00069, P = 0.00069
Identities = 37/144 (25%), Positives = 70/144 (48%)
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIK-PSLEYSINTI 226
W ++ P+ Y+FT H + ++ P LA+ SRDKT+++W ++K S + +T
Sbjct: 8 WHMK-PQSRAYRFTGHKDAVTCVNFSPSGHLLASGSRDKTVRIWVPNVKGESTVFRAHT- 65
Query: 227 ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQL 286
A+V + + + + + D +V VW R L S ++H + V + D +L
Sbjct: 66 ATVRSVHFCSDGQSFVTASD---DKTVKVWATHRQKF-LFSLSQHINWVRCAKFSPDGRL 121
Query: 287 FIASSRVSIIPRAKNIKIFIASSR 310
+++S K +K++ SSR
Sbjct: 122 IVSASD------DKTVKLWDKSSR 139
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 187 (70.9 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 51/225 (22%), Positives = 101/225 (44%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQ----ERVFNDHKRTVNKVSFHYVESNW 112
++W+ ++ + + + + +W++ + + + +F H V V++H + +
Sbjct: 187 LSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESL 246
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
S + D + ++D R ++K H+ +T V + FNP+S + A+ S + T+ WD
Sbjct: 247 FGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 306
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSIKPSLEYSINTI-- 226
+R + + F +H IF W P + LA++ D+ + VWDLS K E S
Sbjct: 307 LRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLS-KIGEEQSTEDAED 365
Query: 227 -------------ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A +S W P + + CS+ D+ + VW +
Sbjct: 366 GPPELLFIHGGHTAKISDFSWNPNEPWII--CSVSEDNIMQVWQM 408
Score = 167 (63.8 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 45/192 (23%), Positives = 85/192 (44%)
Query: 40 HNLRVGKNINLNFSC--NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHK 97
H + KNI + DVAW + E+ + A + +++W+ + SK + H
Sbjct: 218 HRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHT 277
Query: 98 RTVNKVSFHYVESNWLISGSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAF 156
VN +SF+ L +GS D T+ L+D+R + F S+ + + V+++PH+
Sbjct: 278 AEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETIL 337
Query: 157 ASVSENGTIQQWDVRR-------------PEKCFYQFTAHSGPIFACDWHPEHAWL-ATA 202
AS + + WD+ + P + + H+ I W+P W+ +
Sbjct: 338 ASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSV 397
Query: 203 SRDKTIKVWDLS 214
S D ++VW ++
Sbjct: 398 SEDNIMQVWQMA 409
Score = 160 (61.4 bits), Expect = 5.9e-09, P = 5.9e-09
Identities = 48/176 (27%), Positives = 87/176 (49%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ + +L+S S D T+ L+DI R ++ IF +T V DV +
Sbjct: 180 HQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAW 239
Query: 149 NPHSPYAFASVSENGTIQQWDVRR--PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 240 HLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD 299
Query: 206 KTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL ++K L + + +++W P + LAS D ++VWD+ +
Sbjct: 300 KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLHVWDLSK 353
Score = 153 (58.9 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 48/174 (27%), Positives = 78/174 (44%)
Query: 129 CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEK------CFYQFTA 182
CQ ++ E + +NP+ S S++ TI WD+ K FT
Sbjct: 171 CQPDLRLRGHQKEGY-GLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTG 229
Query: 183 HSGPIFACDWHPEHAWL-ATASRDKTIKVWDL----SIKPSLEYSINTIASVSRIKWRPQ 237
H+ + WH H L + + D+ + +WD + KPS +T A V+ + + P
Sbjct: 230 HTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHT-AEVNCLSFNPY 288
Query: 238 RKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+F LA+ S D +V +WD+R + L SF HKD + + W + +ASS
Sbjct: 289 SEFILATGS--ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 340
>CGD|CAL0005992 [details] [associations]
symbol:orf19.3581 species:5476 "Candida albicans" [GO:0042393
"histone binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0006335
"DNA replication-dependent nucleosome assembly" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005992 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AACQ01000094
EMBL:AACQ01000093 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 RefSeq:XP_714940.1 RefSeq:XP_715003.1
ProteinModelPortal:Q59ZD9 STRING:Q59ZD9 GeneID:3643390
GeneID:3643420 KEGG:cal:CaO19.11065 KEGG:cal:CaO19.3581
Uniprot:Q59ZD9
Length = 435
Score = 187 (70.9 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 53/235 (22%), Positives = 107/235 (45%)
Query: 26 FKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQIS 85
FK ++ DT+ + V K+I + W+ E + + NG V +++L +
Sbjct: 193 FKNTILDDTDLSKVQVRLVNKHIPSTTDIFAIDWNRNSEGLLLSADMNGLVNLYDLKKYE 252
Query: 86 RS--KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNT-ES 142
+ + + ++ VN + + + + +G ++L+D R Q S + ++N S
Sbjct: 253 SETLNESQYWENNAIGVNDIEWFPTHDSLFCTADDNGWLKLYDTRNQ-SAAVQNANIGNS 311
Query: 143 VRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE-HAWLAT 201
V V NP A+ NG I+ WD+R + + HS + W+P+ H L +
Sbjct: 312 VNSVACNPGYATGLATGDSNGVIKMWDIRNFDNSLSELHGHSDSVTQLKWNPKCHNILGS 371
Query: 202 ASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVW 256
+S D ++K+ D+S ++ + + V+ W + +AS + D+S++VW
Sbjct: 372 SSSDHSVKLHDMSNDSTIFTHLGHMLGVNDFDWSYADPWMVAS--VADDNSLHVW 424
>UNIPROTKB|A8X8C6 [details] [associations]
symbol:tag-125 "WD repeat-containing protein tag-125"
species:6238 "Caenorhabditis briggsae" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
KO:K14963 HOGENOM:HOG000091642 EMBL:HE601123 RefSeq:XP_002641984.1
ProteinModelPortal:A8X8C6 SMR:A8X8C6 EnsemblMetazoa:CBG09206
GeneID:8583978 KEGG:cbr:CBG09206 CTD:8583978 WormBase:CBG09206
OMA:KLWKSDT Uniprot:A8X8C6
Length = 368
Score = 185 (70.2 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 47/192 (24%), Positives = 96/192 (50%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ T + + V +WN+ +S ER HK VN ++ +S +++ S D T+++++
Sbjct: 94 LGTSSADKTVKIWNMSDLSC---ERTLTGHKLGVNDFAWS-ADSKSIVTASDDKTLKIYE 149
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ + K +T V FNP S S S + +++ WDVR C AHS P
Sbjct: 150 VPTVKMAKTLKGHTNYVFCCNFNPQSSLV-VSGSFDESVRIWDVRTG-MCVKTLPAHSDP 207
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTI-ASVSRIKWRPQRKFHLASC 245
+ A ++ + + + + S D +++WD + ++ ++ V+ +K+ P K+ L+S
Sbjct: 208 VSAVSFNRDGSLITSGSYDGLVRIWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSN 267
Query: 246 SLVVDSSVNVWD 257
+D+++ +WD
Sbjct: 268 ---LDNTLKLWD 276
Score = 154 (59.3 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 60/257 (23%), Positives = 112/257 (43%)
Query: 8 HKHGLKADNGLAQPSRNVFKIFLIKDTEFVETHNLRVGKNI----NLNFSCNDVAWSCIE 63
HK G+ D + S+++ K + E +++ K + N F CN S +
Sbjct: 120 HKLGVN-DFAWSADSKSIVTASDDKTLKIYEVPTVKMAKTLKGHTNYVFCCNFNPQSSL- 177
Query: 64 ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMR 123
+ +G+ + +V +W+ + + H V+ VSF+ + + + SGS DG +R
Sbjct: 178 ---VVSGSFDESVRIWD---VRTGMCVKTLPAHSDPVSAVSFNR-DGSLITSGSYDGLVR 230
Query: 124 LFDIRCQESTK-IFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA 182
++D + K + V V+F+P+ Y +S +N T++ WD + K Q+
Sbjct: 231 IWDTANGQCVKTLVDDENPPVAFVKFSPNGKYILSSNLDN-TLKLWDFGKG-KTLKQYQG 288
Query: 183 HSGP---IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRK 239
H IFA W+ + S D I VW+L K ++ +V P +
Sbjct: 289 HENNKYCIFANFSVTGGKWIISGSEDCKIYVWNLQTKEVVQSLEGHTQAVIASDCHPMQN 348
Query: 240 FHLASCSLVVDSSVNVW 256
+AS +L D+++ +W
Sbjct: 349 M-IASGALEPDNTIRIW 364
Score = 121 (47.7 bits), Expect = 0.00011, P = 0.00011
Identities = 40/154 (25%), Positives = 73/154 (47%)
Query: 139 NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAW 198
+T+S+ V+F+P + S S + T++ W++ C T H + W +
Sbjct: 78 HTKSISAVKFSPCGKFLGTS-SADKTVKIWNMS-DLSCERTLTGHKLGVNDFAWSADSKS 135
Query: 199 LATASRDKTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWD 257
+ TAS DKT+K++++ ++K + +T V + PQ + S S D SV +WD
Sbjct: 136 IVTASDDKTLKIYEVPTVKMAKTLKGHT-NYVFCCNFNPQSSL-VVSGSF--DESVRIWD 191
Query: 258 IRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+R + + H D VS +++ D L + S
Sbjct: 192 VRTGMC-VKTLPAHSDPVSAVSFNRDGSLITSGS 224
>FB|FBgn0015754 [details] [associations]
symbol:Lis-1 "Lissencephaly-1" species:7227 "Drosophila
melanogaster" [GO:0030706 "germarium-derived oocyte
differentiation" evidence=IMP] [GO:0048135 "female germ-line cyst
formation" evidence=IMP] [GO:0045478 "fusome organization"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0050790
"regulation of catalytic activity" evidence=ISS] [GO:0030234
"enzyme regulator activity" evidence=ISS] [GO:0008104 "protein
localization" evidence=IGI;IMP] [GO:0007294 "germarium-derived
oocyte fate determination" evidence=IMP] [GO:0051647 "nucleus
localization" evidence=IMP] [GO:0030716 "oocyte fate determination"
evidence=IGI] [GO:0005938 "cell cortex" evidence=IDA] [GO:0007303
"cytoplasmic transport, nurse cell to oocyte" evidence=IMP]
[GO:0045502 "dynein binding" evidence=ISS] [GO:0007312 "oocyte
nucleus migration involved in oocyte dorsal/ventral axis
specification" evidence=IMP] [GO:0030381 "chorion-containing
eggshell pattern formation" evidence=IMP] [GO:0030473 "nuclear
migration along microtubule" evidence=IGI] [GO:0008298
"intracellular mRNA localization" evidence=IMP] [GO:0030424 "axon"
evidence=IDA] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0030425 "dendrite" evidence=IDA] [GO:0007405 "neuroblast
proliferation" evidence=IMP] [GO:0008088 "axon cargo transport"
evidence=IMP] [GO:0016319 "mushroom body development" evidence=IMP]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0030286 "dynein
complex" evidence=ISS;IDA] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0007018 "microtubule-based movement"
evidence=ISS] [GO:0034501 "protein localization to kinetochore"
evidence=IMP] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0051299
"centrosome separation" evidence=IMP] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IGI;IMP] [GO:0051383 "kinetochore
organization" evidence=IMP] [GO:0005828 "kinetochore microtubule"
evidence=IDA] [GO:0031616 "spindle pole centrosome" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:2001019 "positive
regulation of retrograde axon cargo transport" evidence=IMP]
[GO:0048814 "regulation of dendrite morphogenesis" evidence=IMP]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0030510
"regulation of BMP signaling pathway" evidence=IDA] [GO:0046716
"muscle cell homeostasis" evidence=IGI;IMP] [GO:0072499
"photoreceptor cell axon guidance" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0051642 "centrosome localization" evidence=IMP]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 EMBL:AE013599 GO:GO:0005938
GO:GO:0007294 GO:GO:0006886 GO:GO:0030234 GO:GO:0000776
GO:GO:0007067 GO:GO:0051225 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 GO:GO:0043025
GO:GO:0030425 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0008088 GO:GO:0007283 GO:GO:0051642 GO:GO:0007303
GO:GO:0048813 GO:GO:0048814 GO:GO:0046716 GO:GO:0007405
GO:GO:0016319 GO:GO:0005869 GO:GO:0030510 InterPro:IPR013720
Pfam:PF08513 GO:GO:0030473 GO:GO:0034501 GO:GO:0007093
GO:GO:0008298 GO:GO:0046843 GO:GO:0030286 GO:GO:0019827
GO:GO:0051383 GO:GO:0030723 GO:GO:0031616 GO:GO:0042623
GO:GO:0000777 GO:GO:0045502 GO:GO:0007312 GO:GO:0042052
GO:GO:0072499 GO:GO:0048142 GO:GO:0051299 GO:GO:0005828
GO:GO:0030381 GeneTree:ENSGT00700000104282 KO:K01062 OMA:WVRGLAF
HAMAP:MF_03141 InterPro:IPR017252 PANTHER:PTHR22847:SF51
PIRSF:PIRSF037647 CTD:36791 EMBL:AF152419 EMBL:AF117606
EMBL:AF098070 EMBL:AY089600 EMBL:BT021404 RefSeq:NP_001246361.1
RefSeq:NP_477160.1 RefSeq:NP_788370.1 RefSeq:NP_788371.1
RefSeq:NP_788372.1 RefSeq:NP_788373.1 RefSeq:NP_995852.1
UniGene:Dm.646 ProteinModelPortal:Q7KNS3 SMR:Q7KNS3 DIP:DIP-59474N
IntAct:Q7KNS3 MINT:MINT-774081 STRING:Q7KNS3 PaxDb:Q7KNS3
EnsemblMetazoa:FBtr0087236 EnsemblMetazoa:FBtr0087240
EnsemblMetazoa:FBtr0087241 EnsemblMetazoa:FBtr0304747 GeneID:36791
KEGG:dme:Dmel_CG8440 FlyBase:FBgn0015754 InParanoid:Q8SXJ6
OrthoDB:EOG4ZKH2S PhylomeDB:Q7KNS3 GenomeRNAi:36791 NextBio:800399
Bgee:Q7KNS3 GermOnline:CG8440 GO:GO:0043143 Uniprot:Q7KNS3
Length = 411
Score = 186 (70.5 bits), Expect = 5.2e-12, P = 5.2e-12
Identities = 56/225 (24%), Positives = 107/225 (47%)
Query: 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV 143
I R ++ H+ ++ +V FH + + ++S S+D T+R++D E + +T+SV
Sbjct: 95 IPRPPEKFSLTGHRASITRVIFHPIFA-LMVSASEDATIRIWDFETGEYERSLKGHTDSV 153
Query: 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS 203
+DV F+ AS S + +I+ WD ++ +C H + + + P ++ +AS
Sbjct: 154 QDVAFDAQGKL-LASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSAS 212
Query: 204 RDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHL-----ASCSLVVDSSVNVWDI 258
RD+TIK+W+++ Y + T +W + H+ A+CS D ++ VW +
Sbjct: 213 RDRTIKMWEVATG----YCVKTYTG--HREWVRMVRVHIEGSIFATCSN--DQTIRVW-L 263
Query: 259 RRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIK 303
+H+ V +AW P+ A+S ++ A N K
Sbjct: 264 TNSKDCKVELRDHEHTVECIAWA--PEA--AASAINEAAGADNKK 304
Score = 154 (59.3 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 35/112 (31%), Positives = 59/112 (52%)
Query: 101 NKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVS 160
NK H + +L SGS+D T+R++D+ + VR + F+P Y S S
Sbjct: 302 NKKGHH--QGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKY-LVSAS 358
Query: 161 ENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
++ TI+ WD+R ++C AH + D+H H ++ + S D+T+KVW+
Sbjct: 359 DDKTIRVWDLRN-KRCMKTLYAHQHFCTSIDFHKAHPYVISGSVDQTVKVWE 409
>MGI|MGI:1916794 [details] [associations]
symbol:Wdr5b "WD repeat domain 5B" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1916794 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P61964
GeneTree:ENSGT00690000101787 KO:K14963 HOGENOM:HOG000091642
EMBL:EF011616 EMBL:AK009247 EMBL:AK149554 EMBL:AK165100
EMBL:BC064045 IPI:IPI00110312 RefSeq:NP_081389.1 UniGene:Mm.37802
ProteinModelPortal:Q9D7H2 SMR:Q9D7H2 PhosphoSite:Q9D7H2
PRIDE:Q9D7H2 Ensembl:ENSMUST00000042203 GeneID:69544 KEGG:mmu:69544
UCSC:uc007zcc.1 CTD:54554 HOVERGEN:HBG055117 InParanoid:Q9D7H2
OMA:SAACHPT OrthoDB:EOG49S687 NextBio:329734 Bgee:Q9D7H2
CleanEx:MM_WDR5B Genevestigator:Q9D7H2 Uniprot:Q9D7H2
Length = 328
Score = 183 (69.5 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 51/208 (24%), Positives = 108/208 (51%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+A+ A + +++W G + ++ ++ H ++ V++ +S+ L+S S D T++++D
Sbjct: 54 LASSAADALIIIW--GAYDGNCKKTLYG-HSLEISDVAWSS-DSSRLVSASDDKTLKVWD 109
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+R + K +++ V +FNP S S S + +++ W+V+ KC +AHS P
Sbjct: 110 MRSGKCLKTLKGHSDFVFCCDFNPPSNL-IVSGSFDESVKIWEVKTG-KCLKTLSAHSDP 167
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINT-IASVSRIKWRPQRKFHLASC 245
I A +++ + + + S D ++WD + L + VS +K+ P K+ L +
Sbjct: 168 ISAVNFNCNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKFSPNGKYILTA- 226
Query: 246 SLVVDSSVNVWDIRRPYIPLASFTEHKD 273
+D+++ +WD R L ++T HK+
Sbjct: 227 --TLDNTLKLWDYSRGRC-LKTYTGHKN 251
Score = 173 (66.0 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 51/231 (22%), Positives = 102/231 (44%)
Query: 33 DTEFVETHNLRVGKNINLNFSCNDVAWSCI---EENHIATGATNGAVVVWNLGQISRSKQ 89
D + ++ ++R GK + +D + C N I +G+ + +V +W ++ K
Sbjct: 101 DDKTLKVWDMRSGKCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIW---EVKTGKC 157
Query: 90 ERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTK-IFHSNTESVRDVEF 148
+ + H ++ V+F+ + ++SGS DG R++D + + + V V+F
Sbjct: 158 LKTLSAHSDPISAVNFN-CNGSLIVSGSYDGLCRIWDAASGQCLRTLADEGNPPVSFVKF 216
Query: 149 NPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP---IFACDWHPEHAWLATASRD 205
+P+ Y + +N T++ WD R +C +T H +FA W+ + S D
Sbjct: 217 SPNGKYILTATLDN-TLKLWDYSRG-RCLKTYTGHKNEKYCLFASFSVTGRKWVVSGSED 274
Query: 206 KTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVW 256
+ +W+L K ++ V P + +AS +L D ++ VW
Sbjct: 275 NMVYIWNLQTKEIVQRLQGHTDVVISAACHPTKNI-IASAALENDKTIKVW 324
Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 29/118 (24%), Positives = 57/118 (48%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYA 155
H ++ V F WL S + D + ++ K + ++ + DV ++ S
Sbjct: 38 HSAAISSVKFS-PNGEWLASSAADALIIIWGAYDGNCKKTLYGHSLEISDVAWSSDSS-R 95
Query: 156 FASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
S S++ T++ WD+R KC HS +F CD++P + + S D+++K+W++
Sbjct: 96 LVSASDDKTLKVWDMRSG-KCLKTLKGHSDFVFCCDFNPPSNLIVSGSFDESVKIWEV 152
>UNIPROTKB|Q8TC44 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
[GO:0005814 "centriole" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0005932 "microtubule basal body" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
UniGene:Hs.25130 HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743
CTD:282809 OrthoDB:EOG41VK2R EMBL:BC026080 EMBL:AK074772
IPI:IPI00152269 RefSeq:NP_758440.1 UniGene:Hs.604487
ProteinModelPortal:Q8TC44 SMR:Q8TC44 IntAct:Q8TC44 STRING:Q8TC44
PhosphoSite:Q8TC44 DMDM:74762610 PRIDE:Q8TC44 DNASU:282809
Ensembl:ENST00000313546 GeneID:282809 KEGG:hsa:282809
UCSC:uc001tba.3 GeneCards:GC12M089814 HGNC:HGNC:30836 HPA:HPA038841
MIM:614784 neXtProt:NX_Q8TC44 PharmGKB:PA165513299
InParanoid:Q8TC44 OMA:TASWDTF PhylomeDB:Q8TC44 ChiTaRS:POC1B
GenomeRNAi:282809 NextBio:93521 ArrayExpress:Q8TC44 Bgee:Q8TC44
CleanEx:HS_WDR51B Genevestigator:Q8TC44 GermOnline:ENSG00000139323
Uniprot:Q8TC44
Length = 478
Score = 187 (70.9 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 59/227 (25%), Positives = 110/227 (48%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLF- 125
+AT + + +++WN +R+ + + HK V V F N L S S+D T+RL+
Sbjct: 33 LATASWDTFLMLWNFKPHARAYR---YVGHKDVVTSVQFS-PHGNLLASASRDRTVRLWI 88
Query: 126 -DIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHS 184
D R + S F ++T VR V+F+ + A+ SE+ +I+ W + R ++ Y H+
Sbjct: 89 PDKRGKFSE--FKAHTAPVRSVDFSADGQF-LATASEDKSIKVWSMYR-QRFLYSLYRHT 144
Query: 185 GPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLAS 244
+ + P+ + + S DKTIK+WD + K + +++ + + + P +AS
Sbjct: 145 HWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTC-IAS 203
Query: 245 CSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
D +V VWD+R + L + H V+ +++ I +S
Sbjct: 204 AGS--DQTVKVWDVRVNKL-LQHYQVHSGGVNCISFHPSGNYLITAS 247
Score = 175 (66.7 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 49/169 (28%), Positives = 82/169 (48%)
Query: 90 ERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFN 149
ER F HK + + L + S D + L++ + + + + V V+F+
Sbjct: 11 ERYFKGHKAAITSLDLS-PNGKQLATASWDTFLMLWNFKPHARAYRYVGHKDVVTSVQFS 69
Query: 150 PHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIK 209
PH AS S + T++ W + K F +F AH+ P+ + D+ + +LATAS DK+IK
Sbjct: 70 PHGNL-LASASRDRTVRLWIPDKRGK-FSEFKAHTAPVRSVDFSADGQFLATASEDKSIK 127
Query: 210 VWDLSIKPSLEYSINTIASVSRI-KWRPQRKFHLASCSLVVDSSVNVWD 257
VW + + L YS+ R K+ P + + SCS D ++ +WD
Sbjct: 128 VWSMYRQRFL-YSLYRHTHWVRCAKFSPDGRL-IVSCS--EDKTIKIWD 172
Score = 159 (61.0 bits), Expect = 9.4e-09, P = 9.4e-09
Identities = 48/195 (24%), Positives = 94/195 (48%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
N +A+ + + V +W + R K F H V V F + +L + S+D ++++
Sbjct: 73 NLLASASRDRTVRLWIPDK--RGKFSE-FKAHTAPVRSVDFS-ADGQFLATASEDKSIKV 128
Query: 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHS 184
+ + Q + +T VR +F+P S SE+ TI+ WD ++C F+
Sbjct: 129 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRL-IVSCSEDKTIKIWDTTN-KQCVNNFSDSV 186
Query: 185 GPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE-YSINTIASVSRIKWRPQRKFHLA 243
G D++P +A+A D+T+KVWD+ + L+ Y +++ V+ I + P + +
Sbjct: 187 GFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHS-GGVNCISFHPSGNYLIT 245
Query: 244 SCSLVVDSSVNVWDI 258
+ S D ++ + D+
Sbjct: 246 ASS---DGTLKILDL 257
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 187 (70.9 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 59/227 (25%), Positives = 112/227 (49%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLF- 125
+AT + + +++WN +R+ + + HK V V F + N L S S+D T+RL+
Sbjct: 33 LATASWDTFLMLWNCKPQARAFR---YVGHKDVVTSVQFSPL-GNLLASASRDRTVRLWI 88
Query: 126 -DIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHS 184
D R + S F ++T VR V+F+ + A+ SE+ +I+ W++ R ++ Y H+
Sbjct: 89 PDKRGKSSE--FKAHTAPVRSVDFSADGQF-LATASEDKSIKVWNMYR-QRFLYSLYRHT 144
Query: 185 GPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLAS 244
+ + P+ + + S DKTIK+WD + K + +++ + + + P +AS
Sbjct: 145 HWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTC-IAS 203
Query: 245 CSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
D +V +WDIR + L + H V+ +++ I +S
Sbjct: 204 AGS--DHTVKIWDIRVNKL-LQHYQVHSGGVNCVSFHPSGNYIITAS 247
Score = 170 (64.9 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 50/169 (29%), Positives = 83/169 (49%)
Query: 90 ERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFN 149
ER F HK + V F L + S D + L++ + Q + + + V V+F+
Sbjct: 11 ERYFKGHKAAITSVDFS-PSGKQLATASWDTFLMLWNCKPQARAFRYVGHKDVVTSVQFS 69
Query: 150 PHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIK 209
P AS S + T++ W + K +F AH+ P+ + D+ + +LATAS DK+IK
Sbjct: 70 PLGNL-LASASRDRTVRLWIPDKRGKSS-EFKAHTAPVRSVDFSADGQFLATASEDKSIK 127
Query: 210 VWDLSIKPSLEYSINTIASVSRI-KWRPQRKFHLASCSLVVDSSVNVWD 257
VW++ + L YS+ R K+ P + + SCS D ++ +WD
Sbjct: 128 VWNMYRQRFL-YSLYRHTHWVRCAKFSPDGRL-IVSCS--EDKTIKIWD 172
Score = 162 (62.1 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 45/195 (23%), Positives = 95/195 (48%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
N +A+ + + V +W + +S + F H V V F + +L + S+D ++++
Sbjct: 73 NLLASASRDRTVRLWIPDKRGKSSE---FKAHTAPVRSVDFS-ADGQFLATASEDKSIKV 128
Query: 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHS 184
+++ Q + +T VR +F+P S SE+ TI+ WD ++C F+
Sbjct: 129 WNMYRQRFLYSLYRHTHWVRCAKFSPDGRL-IVSCSEDKTIKIWDTTN-KQCVNNFSDSV 186
Query: 185 GPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE-YSINTIASVSRIKWRPQRKFHLA 243
G D++P +A+A D T+K+WD+ + L+ Y +++ V+ + + P + +
Sbjct: 187 GFANFVDFNPNGTCIASAGSDHTVKIWDIRVNKLLQHYQVHS-GGVNCVSFHPSGNYIIT 245
Query: 244 SCSLVVDSSVNVWDI 258
+ S D ++ + D+
Sbjct: 246 ASS---DGTLKILDL 257
>POMBASE|SPAC12G12.14c [details] [associations]
symbol:pfs2 "WD repeat protein Pfs2" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IDA]
[GO:0006378 "mRNA polyadenylation" evidence=ISO] [GO:0006379 "mRNA
cleavage" evidence=ISO] [GO:0031124 "mRNA 3'-end processing"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC12G12.14c GO:GO:0005829 EMBL:CU329670 GO:GO:0051301
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006378 GO:GO:0000070 GO:GO:2000045 GO:GO:0005847
GO:GO:0006379 KO:K15542 HOGENOM:HOG000213918 OrthoDB:EOG4QVGMD
PIR:T37587 RefSeq:NP_592884.1 ProteinModelPortal:Q9UTN4
STRING:Q9UTN4 EnsemblFungi:SPAC12G12.14c.1 GeneID:2543089
KEGG:spo:SPAC12G12.14c OMA:TALCTQW NextBio:20804117 Uniprot:Q9UTN4
Length = 509
Score = 187 (70.9 bits), Expect = 6.6e-12, P = 6.6e-12
Identities = 59/211 (27%), Positives = 97/211 (45%)
Query: 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLI 114
N V W+ + + TG++ G +WN G E + H V + + WLI
Sbjct: 85 NVVRWTP-DGRRLLTGSSTGEFTLWN-GLTFNF--ELINQSHDYAVRCAEWS-TDGRWLI 139
Query: 115 SGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPE 174
SG G ++ F+ + KI ++ VRDV F+P+ F + S++G+++ W+
Sbjct: 140 SGDGGGMVKYFEPNLN-NVKIVQAHEMEVRDVAFSPNDS-KFVTASDDGSLKVWNFHMST 197
Query: 175 KCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL---SIKPSLEYSINTIASVSR 231
+ + T H + DWHP LA+ S+D +K WD + +L NTI S
Sbjct: 198 EEL-KLTGHGWDVKTVDWHPSKGLLASGSKDNLVKFWDPRTGTCIATLHGHKNTIMQASF 256
Query: 232 IKWRPQRKF---HLASCSLVVDSSVNVWDIR 259
Q+ F +LA+ S DS+ V+D+R
Sbjct: 257 -----QKNFGSNYLATVSR--DSTCRVFDLR 280
Score = 124 (48.7 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 45/180 (25%), Positives = 79/180 (43%)
Query: 91 RVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQ-ESTKIFHSNTESVRDVEFN 149
++ H+ V V+F +S + ++ S DG++++++ E K+ + V+ V+++
Sbjct: 158 KIVQAHEMEVRDVAFSPNDSKF-VTASDDGSLKVWNFHMSTEELKLTGHGWD-VKTVDWH 215
Query: 150 PHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHA--WLATASRDKT 207
P S AS S++ ++ WD R C H I + +LAT SRD T
Sbjct: 216 P-SKGLLASGSKDNLVKFWDPRTGT-CIATLHGHKNTIMQASFQKNFGSNYLATVSRDST 273
Query: 208 IKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLAS 267
+V+DL + V+ + W P L + D SVN + + P PL S
Sbjct: 274 CRVFDLRAMKDVRVLRGHEKDVNCVTWHPLYPNLLTTGGS--DGSVNHYSLDEP--PLLS 329
>POMBASE|SPBC1711.16 [details] [associations]
symbol:SPBC1711.16 "WD repeat protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0043234 "protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.16 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006364 HOGENOM:HOG000212580 KO:K14791
OMA:RGVAKET eggNOG:NOG290487 OrthoDB:EOG4DNJCV RefSeq:NP_595889.1
ProteinModelPortal:Q9P775 STRING:Q9P775 EnsemblFungi:SPBC1711.16.1
GeneID:2539789 KEGG:spo:SPBC1711.16 NextBio:20800938 Uniprot:Q9P775
Length = 516
Score = 187 (70.9 bits), Expect = 6.7e-12, P = 6.7e-12
Identities = 60/220 (27%), Positives = 102/220 (46%)
Query: 46 KNINLNFSCNDV-AWSCIEENH--IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNK 102
K IN ++ + V A S H + +G+ + + +W+L + K F H V+
Sbjct: 246 KKINDSYHTDAVLALSSNRNAHNLLVSGSADTTLKLWDLSTCNCVKS---FTYHSDKVSC 302
Query: 103 VSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSEN 162
+ ++ + L+SGS D T ++ D+R +E+ F T V +V ++ HS F ++N
Sbjct: 303 LDWYSKAPSVLLSGSYDKTAKIADLRLEEAPSSFQV-TSDVENVAWDQHSENNFFIGTDN 361
Query: 163 GTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE-HAWLATASRDKTIKVWDLS-IKPSLE 220
G + D R K +Q AH GPI +P +++AT S D+ +K+W+ S P +
Sbjct: 362 GIVYYCDARNLSKSVWQLQAHDGPISCLSVNPSVPSFVATGSTDRVVKLWNTSDSSPKMV 421
Query: 221 YSINT-IASVSRIKWRPQRK--FHLASCSLVVDSSVNVWD 257
S + + V + FHLA+ V VWD
Sbjct: 422 VSRDLDVGRVFTCSFTTDESTAFHLAASGS--KGVVRVWD 459
>POMBASE|SPAC227.12 [details] [associations]
symbol:SPAC227.12 "U4/U6 x U5 tri-snRNP complex subunit
Prp4 family (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=ISS] [GO:0046540 "U4/U6 x U5 tri-snRNP complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 PomBase:SPAC227.12
GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0046540 HSSP:P16649 GO:GO:0045292
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
OMA:CKIWDLR OrthoDB:EOG4V1B90 PIR:T50168 RefSeq:NP_592966.1
ProteinModelPortal:Q9UTC7 IntAct:Q9UTC7 STRING:Q9UTC7
EnsemblFungi:SPAC227.12.1 GeneID:2541477 KEGG:spo:SPAC227.12
NextBio:20802576 Uniprot:Q9UTC7
Length = 462
Score = 186 (70.5 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 63/239 (26%), Positives = 109/239 (45%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNW--------LISG 116
NH A+G+ G V VWN +S + ++F H V+ + ++ + W L +G
Sbjct: 185 NHFASGSWGGQVKVWNSDNLS---EVQLFRGHTDRVSGLDWYPLCQAWDADSEQLTLATG 241
Query: 117 SQDGTMRLFDIRCQESTKIFH--SNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPE 174
+ D T+ L+ + +ST + + V V F+P Y S S + T + WDV
Sbjct: 242 AADNTVCLW--KASQSTPLLRLEGHLARVGRVAFHPSGDY-LVSASFDTTWRLWDVHTGV 298
Query: 175 KCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKW 234
+ Q HS IF+ P+ + +++ D ++WDL S+ I + + W
Sbjct: 299 ELLMQ-EGHSEGIFSIACQPDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAW 357
Query: 235 RPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA-SFTEHKDVVSGLAW-RGDPQLFIASS 291
P + LA+ S D +V +WD+R+ + LA + H +VS + + FIA+S
Sbjct: 358 SPNG-YQLATSS--ADDTVKIWDLRK--VSLAHTIPAHSSLVSDVRYIESGVNRFIATS 411
Score = 186 (70.5 bits), Expect = 6.9e-12, P = 6.9e-12
Identities = 67/236 (28%), Positives = 105/236 (44%)
Query: 58 AWSCIEEN-HIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
AW E +ATGA + V +W + S+S H V +V+FH ++L+S
Sbjct: 228 AWDADSEQLTLATGAADNTVCLW---KASQSTPLLRLEGHLARVGRVAFH-PSGDYLVSA 283
Query: 117 SQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQ-WDVRRPEK 175
S D T RL+D+ + ++E + + P + S N I + WD+R K
Sbjct: 284 SFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDG--SLVSSGGNDAIGRIWDLRSG-K 340
Query: 176 CFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIAS-VSRIKW 234
H I A W P LAT+S D T+K+WDL K SL ++I +S VS +++
Sbjct: 341 SIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLR-KVSLAHTIPAHSSLVSDVRY 399
Query: 235 RPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIAS 290
+ S D V +W+ + + S H++ V + GD FI+S
Sbjct: 400 IESGVNRFIATS-GYDGCVKLWNPLNCSL-IKSMVGHEEKVMSVDGYGDR--FISS 451
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 185 (70.2 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 53/221 (23%), Positives = 97/221 (43%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLG---QISRSKQER-VFNDHKRTVNKVSFHYVESNW 112
++W+ +E I + + + V W++ ++ Q + VF H+ V V++H +
Sbjct: 178 LSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGV 237
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR 172
S D + ++D+R +++ V + FNP+S + A+ S + T+ WD+R
Sbjct: 238 FGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRN 297
Query: 173 PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSI-------------KPS 218
+ F +H IF W P + LA++ DK + VWDLS P
Sbjct: 298 LRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPE 357
Query: 219 LEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
L + A +S W P + + CS+ D+ + VW +
Sbjct: 358 LLFIHGGHTAKISDFSWNPNEPWVV--CSVSEDNILQVWQM 396
Score = 142 (55.0 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 49/227 (21%), Positives = 97/227 (42%)
Query: 82 GQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQEST---KIFH- 137
G ++ + + +H+ VN+ + +SN + + S + +FD + F+
Sbjct: 105 GAVNGKVEPDIRINHEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNP 164
Query: 138 -----SNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQ------FTAHSGP 186
+T+ + +NP+ S S++ T+ WD+ + + F H
Sbjct: 165 LIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESV 224
Query: 187 IFACDWHPEHAWL-ATASRDKTIKVWDLSIKPSLEYSINT-IASVSRIKWRPQRKFHLAS 244
+ WH H + + DK + +WD+ + I+ A V+ + + P +F LA+
Sbjct: 225 VEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTP-GHCIDAHSAEVNCLAFNPYSEFILAT 283
Query: 245 CSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
S D +V +WD+R + L SF H+D + + W + +ASS
Sbjct: 284 GS--ADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASS 328
Score = 141 (54.7 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 37/174 (21%), Positives = 76/174 (43%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW + + + + +++W+ + S + H VN ++F+ L +
Sbjct: 227 DVAWHVLHDGVFGSVGDDKKLLIWD---VRTSTPGHCIDAHSAEVNCLAFNPYSEFILAT 283
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V+++PH+ AS + + WD+ +
Sbjct: 284 GSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIG 343
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAWLA-TASRDKTIKVWDLS 214
P + + H+ I W+P W+ + S D ++VW ++
Sbjct: 344 EDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMA 397
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 185 (70.2 bits), Expect = 7.2e-12, P = 7.2e-12
Identities = 53/221 (23%), Positives = 97/221 (43%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLG---QISRSKQER-VFNDHKRTVNKVSFHYVESNW 112
++W+ +E I + + + V W++ ++ Q + VF H+ V V++H +
Sbjct: 178 LSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGV 237
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR 172
S D + ++D+R +++ V + FNP+S + A+ S + T+ WD+R
Sbjct: 238 FGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWDLRN 297
Query: 173 PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSI-------------KPS 218
+ F +H IF W P + LA++ DK + VWDLS P
Sbjct: 298 LRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDAEDGPPE 357
Query: 219 LEYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
L + A +S W P + + CS+ D+ + VW +
Sbjct: 358 LLFIHGGHTAKISDFSWNPNEPWVV--CSVSEDNILQVWQM 396
Score = 142 (55.0 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 49/227 (21%), Positives = 97/227 (42%)
Query: 82 GQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQEST---KIFH- 137
G ++ + + +H+ VN+ + +SN + + S + +FD + F+
Sbjct: 105 GAVNGKVEPDIRINHEGEVNRARYMPQKSNIIATKSPHADVYIFDYLKHSAVPRDNTFNP 164
Query: 138 -----SNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQ------FTAHSGP 186
+T+ + +NP+ S S++ T+ WD+ + + F H
Sbjct: 165 LIRLKGHTKEGYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESV 224
Query: 187 IFACDWHPEHAWL-ATASRDKTIKVWDLSIKPSLEYSINT-IASVSRIKWRPQRKFHLAS 244
+ WH H + + DK + +WD+ + I+ A V+ + + P +F LA+
Sbjct: 225 VEDVAWHVLHDGVFGSVGDDKKLLIWDVRTSTP-GHCIDAHSAEVNCLAFNPYSEFILAT 283
Query: 245 CSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
S D +V +WD+R + L SF H+D + + W + +ASS
Sbjct: 284 GS--ADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASS 328
Score = 141 (54.7 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 37/174 (21%), Positives = 76/174 (43%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW + + + + +++W+ + S + H VN ++F+ L +
Sbjct: 227 DVAWHVLHDGVFGSVGDDKKLLIWD---VRTSTPGHCIDAHSAEVNCLAFNPYSEFILAT 283
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R + F S+ + + V+++PH+ AS + + WD+ +
Sbjct: 284 GSADKTVALWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIG 343
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAWLA-TASRDKTIKVWDLS 214
P + + H+ I W+P W+ + S D ++VW ++
Sbjct: 344 EDQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMA 397
>FB|FBgn0036733 [details] [associations]
symbol:U4-U6-60K "U4-U6 small nuclear riboprotein factor 60K"
species:7227 "Drosophila melanogaster" [GO:0005688 "U6 snRNP"
evidence=ISS] [GO:0005687 "U4 snRNP" evidence=ISS] [GO:0008380 "RNA
splicing" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0030532 "small nuclear ribonucleoprotein complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0030621 "U4 snRNA binding" evidence=IDA] [GO:0017070 "U6 snRNA
binding" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR027106 PANTHER:PTHR19846 GO:GO:0030532
GO:GO:0017070 GO:GO:0030621 InterPro:IPR014906 Pfam:PF08799
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR HSSP:O43172
EMBL:AY061623 RefSeq:NP_648990.1 UniGene:Dm.987 SMR:Q9VVI0
MINT:MINT-295539 STRING:Q9VVI0 EnsemblMetazoa:FBtr0075209
GeneID:39955 KEGG:dme:Dmel_CG6322 UCSC:CG6322-RA CTD:39955
FlyBase:FBgn0036733 InParanoid:Q9VVI0 OrthoDB:EOG4R7SRZ
GenomeRNAi:39955 NextBio:816257 Uniprot:Q9VVI0
Length = 553
Score = 187 (70.9 bits), Expect = 7.7e-12, P = 7.7e-12
Identities = 57/219 (26%), Positives = 103/219 (47%)
Query: 63 EENHIA--TGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDG 120
EEN +A +G +GAV +W H+ V+KV+FH +L + D
Sbjct: 319 EENVVAMASGGHDGAVKLWGFNNEESIADITGHMPHR--VSKVAFH-PSGRFLATACYDS 375
Query: 121 TMRLFDIRCQESTKIFHS--NTESVRDVEFNPH-SPYAFASVSENGTIQQWDVRRPEKCF 177
+ RL+D+ ++ T++ H + + V + ++ S + G + WD+R +C
Sbjct: 376 SWRLWDL--EQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRV--WDLRTG-RCI 430
Query: 178 YQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIAS-VSRIKWRP 236
H G +F D+ P +AT S+D T K+WDL + + Y+I + +S +K++
Sbjct: 431 MFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPV-YTIPAHTNLISDVKYQQ 489
Query: 237 QRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVV 275
+ L +CS DS+ +W + + PL + H + V
Sbjct: 490 ECGSFLVTCSY--DSTTKIWS-NKTWQPLKTLQGHDNKV 525
>RGD|1307750 [details] [associations]
symbol:Nedd1 "neural precursor cell expressed, developmentally
down-regulated 1" species:10116 "Rattus norvegicus" [GO:0000242
"pericentriolar material" evidence=IEA;ISO] [GO:0000922 "spindle
pole" evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005813 "centrosome" evidence=ISO] [GO:0005814 "centriole"
evidence=IEA;ISO] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0045177 "apical part of cell"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1307750 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0045177
GO:GO:0005932 GO:GO:0000242 GO:GO:0000922
GeneTree:ENSGT00390000001561 OMA:FSPIRDD OrthoDB:EOG4NZTSQ
IPI:IPI00366204 Ensembl:ENSRNOT00000005463 UCSC:RGD:1307750
Uniprot:D3ZAH3
Length = 659
Score = 188 (71.2 bits), Expect = 8.0e-12, P = 8.0e-12
Identities = 63/242 (26%), Positives = 115/242 (47%)
Query: 60 SCIEEN----HIATGATNGAVVVWNLGQISRSKQ-ERVFNDHKRTVNKVSFHYVESNWLI 114
+C++ N ++A+G N V +W+L +SK+ R DHKR V V++++ + ++
Sbjct: 81 TCVDLNSTSMYLASGGLNNTVNIWDL----KSKRLHRSLKDHKREVTCVAYNWNDC-YIA 135
Query: 115 SGSQDGTMRLFDIRCQESTKIF-HSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRP 173
SGS G + L + S+ F H + + VR ++++ SVS+NG + WDV
Sbjct: 136 SGSLSGEIILHSVTTNTSSTPFGHGSKQPVRHIKYSLFRKSLLGSVSDNGVVTLWDVNS- 194
Query: 174 EKCFYQF-TAHSGPIFACDWHPEHAWL-ATASRDKTIKVWDLSIKPSLEYSINTIASVSR 231
+ ++ F + H P + P + L T DK I ++D S K L ++ ++
Sbjct: 195 QSAYHSFDSTHKAPASGLCFSPVNELLFVTIGLDKRIILYDTSSK-KLVKTLVADTPLTA 253
Query: 232 IKWRPQRKFHLASCSLVVDSS---VNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFI 288
+ + P SL + SS + +D+R P+ + + HK V +A++ L
Sbjct: 254 VDFMPD------GASLAIGSSRGKIYQYDLRMLKSPVKTISAHKTSVQCIAFQYSTSLTK 307
Query: 289 AS 290
AS
Sbjct: 308 AS 309
>MGI|MGI:1914735 [details] [associations]
symbol:Pwp1 "PWP1 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1914735 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:11137
GeneTree:ENSGT00390000017324 HOGENOM:HOG000212580
HOVERGEN:HBG001543 KO:K14791 OMA:RGVAKET OrthoDB:EOG4STS4J
EMBL:AK009972 EMBL:AK082158 EMBL:BC003199 EMBL:BC023137
IPI:IPI00320422 RefSeq:NP_598754.2 UniGene:Mm.18834
ProteinModelPortal:Q99LL5 SMR:Q99LL5 IntAct:Q99LL5 STRING:Q99LL5
PhosphoSite:Q99LL5 PaxDb:Q99LL5 PRIDE:Q99LL5
Ensembl:ENSMUST00000001836 GeneID:103136 KEGG:mmu:103136
UCSC:uc007gnc.2 InParanoid:Q99LL5 NextBio:355805 Bgee:Q99LL5
CleanEx:MM_PWP1 Genevestigator:Q99LL5 GermOnline:ENSMUSG00000001785
Uniprot:Q99LL5
Length = 501
Score = 186 (70.5 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 51/169 (30%), Positives = 81/169 (47%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
D++W+ N +A+ + + VV+W+L S K H V + FH E+ LIS
Sbjct: 260 DLSWNKTVRNVLASASADSTVVLWDL---SVGKSVARLTAHTDKVQTLQFHPFEAQTLIS 316
Query: 116 GSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEK 175
GS D ++ L+D R + + V +N SP F + +++G + D R +K
Sbjct: 317 GSYDKSVALYDCRDPSQNHRQWRFSGQIERVTWNHFSPCHFLASTDDGFVYNLDARS-DK 375
Query: 176 CFYQFTAHSGPIFACDWHPE-HAWLATASRDKTIKVWD-LSIKPSLEYS 222
+ AH+ I D + L TAS DK +K+WD L +PSL +S
Sbjct: 376 PIFTLNAHNDEISGLDLSSQIKGCLVTASADKFVKIWDILGDRPSLIHS 424
>UNIPROTKB|I3LTD5 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:CU855997
EMBL:CU914448 Ensembl:ENSSSCT00000026043 Uniprot:I3LTD5
Length = 1471
Score = 191 (72.3 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 56/228 (24%), Positives = 100/228 (43%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
V W E + TGA++G +WN G E + H V +++ + + W+++
Sbjct: 125 VGWWTPEGRRLVTGASSGEFTLWN-GLTFNF--ETILQAHDSPVRAMTWSHNDM-WMLTA 180
Query: 117 SQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
G ++ + + K+F ++ E++R+ F+P + FA+ S++GT++ WD R C
Sbjct: 181 DHGGYVKYWQSN-MNNVKMFQAHKEAIREASFSP-TDNKFATCSDDGTVRIWDFLR---C 235
Query: 177 FYQ--FTAHSGPIFACDWHPEHAWLATASRD--KTIKVWDLSIKPSLEYSINTIASVSRI 232
+ H + DWHP + + S+D + IK WD SL +V +
Sbjct: 236 HEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEV 295
Query: 233 KWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAW 280
K + L + D ++DIR L F HK + +AW
Sbjct: 296 KLNLNGNWLLTASR---DHLCKLFDIRNLKEELQVFRGHKKEATAVAW 340
Score = 166 (63.5 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 49/200 (24%), Positives = 89/200 (44%)
Query: 35 EFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFN 94
+F+ H R+ + + C D W + + +G+ + + + +
Sbjct: 231 DFLRCHEERILRGHGADVKCVD--WHPTK-GLVVSGSKDSQQPI-KFWDPKTGQSLATLH 286
Query: 95 DHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSP 153
HK TV +V + + NWL++ S+D +LFDIR +E ++F + + V ++P
Sbjct: 287 AHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHE 345
Query: 154 YAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
FAS +G++ W V ++ AH G I++ WHP L + S D T K W
Sbjct: 346 GLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTR 405
Query: 214 SI---KPSLEYSINTIASVS 230
+ K Y++N + +S
Sbjct: 406 NRPGDKMRDRYNLNLLPGMS 425
>MGI|MGI:1919039 [details] [associations]
symbol:Taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=ISO] [GO:0033276
"transcription factor TFTC complex" evidence=ISO] [GO:0043966
"histone H3 acetylation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1919039 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0003713
GO:GO:0043966 GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OMA:YVDSEGP OrthoDB:EOG4NCMCF
EMBL:AK033477 EMBL:AK089463 EMBL:BC013550 IPI:IPI00128308
RefSeq:NP_598727.1 UniGene:Mm.291777 ProteinModelPortal:Q91WQ5
SMR:Q91WQ5 IntAct:Q91WQ5 STRING:Q91WQ5 PhosphoSite:Q91WQ5
PRIDE:Q91WQ5 Ensembl:ENSMUST00000093039 Ensembl:ENSMUST00000165628
GeneID:102162 KEGG:mmu:102162 UCSC:uc009nww.1 InParanoid:Q91WQ5
NextBio:355322 Bgee:Q91WQ5 Genevestigator:Q91WQ5
GermOnline:ENSMUSG00000038697 Uniprot:Q91WQ5
Length = 589
Score = 186 (70.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 52/181 (28%), Positives = 88/181 (48%)
Query: 79 WNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHS 138
W+LG + + ++ H V V S + SGS D T RL+ +I+
Sbjct: 369 WDLGSFTNTV---LYQGHAYPVWDVDISPF-SLYFASGSHDRTARLWSFDRTYPLRIYAG 424
Query: 139 NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAW 198
+ V V+F+P+S Y A+ S + T++ W ++ FT H GP+ + + P +
Sbjct: 425 HLADVDCVKFHPNSNY-LATGSTDKTVRLWSAQQGNSVRL-FTGHRGPVLSLSFSPNGKY 482
Query: 199 LATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
LA+A D+ +K+WDL+ + S++ + + P +AS S+ D+SV VWDI
Sbjct: 483 LASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGL-IASASM--DNSVRVWDI 539
Query: 259 R 259
R
Sbjct: 540 R 540
Score = 176 (67.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 56/213 (26%), Positives = 96/213 (45%)
Query: 91 RVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNP 150
++ H V F +S+ L+S S+D ++R +D+ +T ++ + V DV+ +P
Sbjct: 336 KILRGHCGPVYSTRF-LADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISP 394
Query: 151 HSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKV 210
S Y FAS S + T + W R + H + +HP +LAT S DKT+++
Sbjct: 395 FSLY-FASGSHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 211 WDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTE 270
W S+ V + + P K+ LAS D + +WD+ +
Sbjct: 453 WSAQQGNSVRLFTGHRGPVLSLSFSPNGKY-LASAG--EDQRLKLWDLASGTL-FKELRG 508
Query: 271 HKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIK 303
H D ++ LA+ D L IAS+ + R +I+
Sbjct: 509 HTDSITSLAFSPDSGL-IASASMDNSVRVWDIR 540
Score = 131 (51.2 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 31/107 (28%), Positives = 56/107 (52%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
N++ATG+T+ V +W+ Q R+F H+ V +SF +L S +D ++L
Sbjct: 439 NYLATGSTDKTVRLWSAQQ---GNSVRLFTGHRGPVLSLSFS-PNGKYLASAGEDQRLKL 494
Query: 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR 171
+D+ K +T+S+ + F+P S AS S + +++ WD+R
Sbjct: 495 WDLASGTLFKELRGHTDSITSLAFSPDSGL-IASASMDNSVRVWDIR 540
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 183 (69.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 40/166 (24%), Positives = 80/166 (48%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQE----RVFNDHKRTVNKVSFHYVESNW 112
++W+ +E H+ + + + ++ +W++ S+S ++N H V V++HY+ +
Sbjct: 180 ISWNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAWHYIHDTF 239
Query: 113 LISGSQDGTMRLFDIRCQESTKIFH---SNTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
S D + ++D R TK H ++ V + FNP + A+ S + T+ WD
Sbjct: 240 FGSVGDDKKLMIWDTRT--GTKPIHVVEAHNSEVNCLSFNPFCEFLVATGSTDKTVALWD 297
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
+R + +H+ +F + P + LA+ D+ + VWDLS
Sbjct: 298 MRNLGNRLHSLISHTDEVFQVQFSPHNETVLASCGSDRRVNVWDLS 343
Score = 172 (65.6 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 51/175 (29%), Positives = 89/175 (50%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC---QEST----KIFHSNTESVRDVEF 148
HK+ +S++ + L+S S D ++ ++DI +ST I++ +T V DV +
Sbjct: 173 HKKEGYGISWNPRKEGHLLSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAW 232
Query: 149 NP-HSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWL-ATASRDK 206
+ H + F SV ++ + WD R K + AH+ + ++P +L AT S DK
Sbjct: 233 HYIHDTF-FGSVGDDKKLMIWDTRTGTKPIHVVEAHNSEVNCLSFNPFCEFLVATGSTDK 291
Query: 207 TIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
T+ +WD+ ++ L I+ V ++++ P + LASC D VNVWD+ R
Sbjct: 292 TVALWDMRNLGNRLHSLISHTDEVFQVQFSPHNETVLASCGS--DRRVNVWDLSR 344
Score = 150 (57.9 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 41/174 (23%), Positives = 77/174 (44%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW I + + + +++W+ + +K V H VN +SF+ + +
Sbjct: 229 DVAWHYIHDTFFGSVGDDKKLMIWDTR--TGTKPIHVVEAHNSEVNCLSFNPFCEFLVAT 286
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-- 172
GS D T+ L+D+R S+T+ V V+F+PH+ AS + + WD+ R
Sbjct: 287 GSTDKTVALWDMRNLGNRLHSLISHTDEVFQVQFSPHNETVLASCGSDRRVNVWDLSRIG 346
Query: 173 -----------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W +A+ + D +++W ++
Sbjct: 347 EEQNNEDAADGPPELLFIHGGHTSKISDFSWNPNDPWSIASVAEDNILQIWQMA 400
>POMBASE|SPAC144.13c [details] [associations]
symbol:srw1 "CDK inhibitor Srw1" species:4896
"Schizosaccharomyces pombe" [GO:0000750 "pheromone-dependent signal
transduction involved in conjugation with cellular fusion"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007092 "activation of
mitotic anaphase-promoting complex activity" evidence=TAS]
[GO:0008054 "cyclin catabolic process" evidence=IMP] [GO:0030996
"cell cycle arrest in response to nitrogen starvation"
evidence=IMP] [GO:0043234 "protein complex" evidence=NAS]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IC] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC144.13c GO:GO:0005634
GO:GO:0043234 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0000750 GO:GO:0008054
GO:GO:0007092 GO:GO:0045736 GO:GO:0031137 HOGENOM:HOG000195514
KO:K03364 OrthoDB:EOG43FM5B GO:GO:0030996 EMBL:AB005589
EMBL:AB001285 PIR:T37680 RefSeq:NP_594674.1
ProteinModelPortal:O13286 STRING:O13286 EnsemblFungi:SPAC144.13c.1
GeneID:2542824 KEGG:spo:SPAC144.13c OMA:PMATANL NextBio:20803866
Uniprot:O13286
Length = 556
Score = 185 (70.2 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 62/242 (25%), Positives = 105/242 (43%)
Query: 51 NFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVE- 109
+F N + W + N +A A V +W+ S + V ++ T S +V+
Sbjct: 250 DFYLNLLDWG--QCNMLAV-ALASRVYLWS----GISSEVTVMHNFYPTDTVTSLRWVQR 302
Query: 110 SNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
L G+ +G++ ++D + T+ +TE V + +N H +S + I D
Sbjct: 303 GTHLAVGTHNGSVEIWDAATCKKTRTMSGHTERVGALSWNDH---VLSSGGRDNHILHRD 359
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD-LSIKPSLEYSINTIAS 228
VR PE F TAH + +W+ LA+ D + VWD KP + N IA+
Sbjct: 360 VRAPEHYFRVLTAHRQEVCGLEWNSNENLLASGGNDNALMVWDKFEEKPLYSFH-NHIAA 418
Query: 229 VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFI 288
V I W P ++ LAS D ++ +W+ +R + L + V + L W FI
Sbjct: 419 VKAITWSPHQRGILASGGGTADRTIKLWNTQRGSM-LHNIDTGSQVCN-LLWSKQTNEFI 476
Query: 289 AS 290
++
Sbjct: 477 ST 478
>ZFIN|ZDB-GENE-031118-54 [details] [associations]
symbol:poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0042384 "cilium assembly" evidence=ISS]
[GO:0060287 "epithelial cilium movement involved in determination
of left/right asymmetry" evidence=IMP] [GO:0060271 "cilium
morphogenesis" evidence=IMP] [GO:0003014 "renal system process"
evidence=IMP] [GO:0030030 "cell projection organization"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-031118-54 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042384 GO:GO:0003014
GO:GO:0060287 EMBL:CT033837 GeneTree:ENSGT00700000104282
HOVERGEN:HBG057502 KO:K16482 HOGENOM:HOG000036743 EMBL:AY422998
EMBL:CR405685 EMBL:BC055275 IPI:IPI00506502 RefSeq:NP_956412.1
UniGene:Dr.26707 ProteinModelPortal:A2CEH0
Ensembl:ENSDART00000004771 GeneID:386932 KEGG:dre:386932 CTD:282809
InParanoid:Q6TEQ1 OMA:DENQEER OrthoDB:EOG41VK2R NextBio:20814079
Bgee:A2CEH0 Uniprot:A2CEH0
Length = 490
Score = 184 (69.8 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 57/242 (23%), Positives = 114/242 (47%)
Query: 60 SCIEEN----HIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLI- 114
SC + N +ATG+ + ++++WNL +R+ + F H + V+F S L+
Sbjct: 22 SCADFNPNNKQLATGSCDKSLMIWNLAPKARAFR---FVGHTDVITGVNF--APSGSLVA 76
Query: 115 SGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPE 174
S S+D T+RL+ + + +F ++T SVR V F+ + S++ +++ W V R +
Sbjct: 77 SSSRDQTVRLWTPSIKGESTVFKAHTASVRSVHFS-RDGQRLVTASDDKSVKVWGVER-K 134
Query: 175 KCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKW 234
K Y H+ + + P+ +A+ D+T+++WD S + + S + + +
Sbjct: 135 KFLYSLNRHTNWVRCARFSPDGRLIASCGDDRTVRLWDTSSHQCINIFTDYGGSATFVDF 194
Query: 235 RPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVS 294
+AS D+++ +WDIR + + + H V+ ++ I+ S S
Sbjct: 195 NSSGTC-IASSG--ADNTIKIWDIRTNKL-IQHYKVHNAGVNCFSFHPSGNYLISGSSDS 250
Query: 295 II 296
I
Sbjct: 251 TI 252
Score = 160 (61.4 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 49/222 (22%), Positives = 101/222 (45%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+A+ + + V +W S + VF H +V V F + L++ S D +++++
Sbjct: 75 VASSSRDQTVRLWTP---SIKGESTVFKAHTASVRSVHFSR-DGQRLVTASDDKSVKVWG 130
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ ++ + +T VR F+P AS ++ T++ WD +C FT + G
Sbjct: 131 VERKKFLYSLNRHTNWVRCARFSPDGRL-IASCGDDRTVRLWDTSS-HQCINIFTDYGGS 188
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE-YSINTIASVSRIKWRPQRKFHLASC 245
D++ +A++ D TIK+WD+ ++ Y ++ A V+ + P + ++
Sbjct: 189 ATFVDFNSSGTCIASSGADNTIKIWDIRTNKLIQHYKVHN-AGVNCFSFHPSGNYLISGS 247
Query: 246 SLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLF 287
S DS++ + D+ + + + HK V + + D LF
Sbjct: 248 S---DSTIKILDLLEGRL-IYTLHGHKGPVLTVTFSRDGDLF 285
Score = 125 (49.1 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 43/156 (27%), Positives = 79/156 (50%)
Query: 136 FHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE 195
F + + + +FNP++ A+ S + ++ W++ P+ ++F H+ I ++ P
Sbjct: 14 FKGHKDVISCADFNPNNKQ-LATGSCDKSLMIWNLA-PKARAFRFVGHTDVITGVNFAPS 71
Query: 196 HAWLATASRDKTIKVWDLSIK-PSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
+ +A++SRD+T+++W SIK S + +T ASV + + + L + S D SV
Sbjct: 72 GSLVASSSRDQTVRLWTPSIKGESTVFKAHT-ASVRSVHFSRDGQ-RLVTAS--DDKSVK 127
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIAS 290
VW + R L S H + V + D +L IAS
Sbjct: 128 VWGVERKKF-LYSLNRHTNWVRCARFSPDGRL-IAS 161
>UNIPROTKB|F1SQR9 [details] [associations]
symbol:NEDD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045177 "apical part of cell" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0000242
"pericentriolar material" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0045177
GO:GO:0005932 GO:GO:0000242 GO:GO:0000922
GeneTree:ENSGT00390000001561 EMBL:CU896549
Ensembl:ENSSSCT00000000974 OMA:XPKIASS Uniprot:F1SQR9
Length = 390
Score = 182 (69.1 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 60/233 (25%), Positives = 113/233 (48%)
Query: 60 SCIEEN----HIATGATNGAVVVWNLGQISRSKQ-ERVFNDHKRTVNKVSFHYVESNWLI 114
+C+ N ++ +G N V +W+L +SK+ R DHK V V++++ + ++
Sbjct: 81 TCVSLNSTSMYLVSGGLNNTVNIWDL----KSKRVHRSLKDHKDEVTCVTYNWNDC-YIA 135
Query: 115 SGSQDGTMRLFDIRCQ-ESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRP 173
SGS G + L + ST H + +SVR ++++ SVS+NG + WDV
Sbjct: 136 SGSLSGEIILHSVTTNLSSTPFGHGSNQSVRHLKYSLFKKSLLGSVSDNGIVTLWDVNS- 194
Query: 174 EKCFYQF-TAHSGPIFACDWHPEHAWL-ATASRDKTIKVWDLSIKPSLEYSINTIASVSR 231
+ ++ F +AH P A + P + L T DK I ++D S K ++ ++ A ++
Sbjct: 195 QSPYHSFDSAHKAPASAIGFSPVNELLFVTIGLDKRIILYDTSSKKIVK-TLVADAPLTA 253
Query: 232 IKWRPQRKFHLASCSLVVDSS---VNVWDIRRPYIPLASFTEHKDVVSGLAWR 281
+ + P +L + SS + +D+R P+ + + HK V +A++
Sbjct: 254 VDFMPD------GATLAIGSSRGKIYQYDLRMLKSPVKTISAHKTSVQCIAFQ 300
>UNIPROTKB|E2RR78 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043966 "histone H3 acetylation"
evidence=IEA] [GO:0033276 "transcription factor TFTC complex"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402
"histone acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:AAEX03002720
Ensembl:ENSCAFT00000019257 NextBio:20862231 Uniprot:E2RR78
Length = 607
Score = 185 (70.2 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 51/184 (27%), Positives = 89/184 (48%)
Query: 79 WNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHS 138
W+LG + + ++ H V + S + SGS D T RL+ +I+
Sbjct: 387 WDLGSFTNTV---LYQGHAYPVWDLDISPY-SLYFASGSHDRTARLWSFDRTYPLRIYAG 442
Query: 139 NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAW 198
+ V V+F+P+S Y A+ S + T++ W ++ FT H GP+ + + P +
Sbjct: 443 HLADVDCVKFHPNSNY-LATGSTDKTVRLWSAQQGNSVRL-FTGHRGPVLSLAFSPNGKY 500
Query: 199 LATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
LA+A D+ +K+WDL+ + +++ + + P +AS S+ D+SV VWDI
Sbjct: 501 LASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSL-IASASM--DNSVRVWDI 557
Query: 259 RRPY 262
R Y
Sbjct: 558 RNTY 561
Score = 171 (65.3 bits), Expect = 6.2e-10, P = 6.2e-10
Identities = 54/213 (25%), Positives = 96/213 (45%)
Query: 91 RVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNP 150
++ H V F +S+ L+S S+D ++R +D+ +T ++ + V D++ +P
Sbjct: 354 KILRGHCGPVYSTRF-LADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISP 412
Query: 151 HSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKV 210
+S Y FAS S + T + W R + H + +HP +LAT S DKT+++
Sbjct: 413 YSLY-FASGSHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNYLATGSTDKTVRL 470
Query: 211 WDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTE 270
W S+ V + + P K+ LAS D + +WD+ +
Sbjct: 471 WSAQQGNSVRLFTGHRGPVLSLAFSPNGKY-LASAG--EDQRLKLWDLASGTL-YKELRG 526
Query: 271 HKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIK 303
H D ++ L + D L IAS+ + R +I+
Sbjct: 527 HTDNITSLTFSPDSSL-IASASMDNSVRVWDIR 558
Score = 126 (49.4 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 29/107 (27%), Positives = 56/107 (52%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
N++ATG+T+ V +W+ Q R+F H+ V ++F +L S +D ++L
Sbjct: 457 NYLATGSTDKTVRLWSAQQ---GNSVRLFTGHRGPVLSLAFS-PNGKYLASAGEDQRLKL 512
Query: 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR 171
+D+ K +T+++ + F+P S AS S + +++ WD+R
Sbjct: 513 WDLASGTLYKELRGHTDNITSLTFSPDSSL-IASASMDNSVRVWDIR 558
>MGI|MGI:1918511 [details] [associations]
symbol:Poc1b "POC1 centriolar protein homolog B
(Chlamydomonas)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005813 "centrosome" evidence=ISO] [GO:0005814
"centriole" evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=ISO] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=ISO] [GO:0042995 "cell projection" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:1918511 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OrthoDB:EOG41VK2R OMA:TASWDTF
EMBL:AK045302 EMBL:AK050233 EMBL:AK090075 IPI:IPI00221837
RefSeq:NP_082016.1 UniGene:Mm.440656 ProteinModelPortal:Q8BHD1
SMR:Q8BHD1 IntAct:Q8BHD1 PhosphoSite:Q8BHD1 PRIDE:Q8BHD1
Ensembl:ENSMUST00000020113 GeneID:382406 KEGG:mmu:382406
UCSC:uc007gxh.1 InParanoid:Q8BHD1 NextBio:403270 Bgee:Q8BHD1
CleanEx:MM_WDR51B Genevestigator:Q8BHD1
GermOnline:ENSMUSG00000019952 Uniprot:Q8BHD1
Length = 476
Score = 183 (69.5 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 59/227 (25%), Positives = 112/227 (49%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
IAT + + +++W+L +R+ + + HK V + F + N L S S+D T+RL+
Sbjct: 33 IATASWDTFLMLWSLKPHARAYR---YVGHKDVVTSLQFS-PQGNLLASASRDRTVRLWV 88
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ + + F ++T VR V+F+ + SE+ +I+ W + R ++ Y H+
Sbjct: 89 LDRKGKSSEFKAHTAPVRSVDFSADGQL-LVTASEDKSIKVWSMFR-QRFLYSLYRHTHW 146
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCS 246
+ + P+ + + S DKTIK+WD + K + +++ + + + P +AS
Sbjct: 147 VRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPNGTC-IASAG 205
Query: 247 LVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWR--GDPQLFIASS 291
D +V +WDIR + L + H V+ L++ G+ L ASS
Sbjct: 206 S--DHAVKIWDIRMNKL-LQHYQVHSCGVNCLSFHPLGN-SLVTASS 248
Score = 160 (61.4 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 45/169 (26%), Positives = 78/169 (46%)
Query: 90 ERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFN 149
ER F HK + F + + S D + L+ ++ + + + V ++F+
Sbjct: 11 ERSFKGHKAAITSADFS-PNCKQIATASWDTFLMLWSLKPHARAYRYVGHKDVVTSLQFS 69
Query: 150 PHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIK 209
P AS S + T++ W + R K +F AH+ P+ + D+ + L TAS DK+IK
Sbjct: 70 PQGNL-LASASRDRTVRLWVLDRKGKSS-EFKAHTAPVRSVDFSADGQLLVTASEDKSIK 127
Query: 210 VWDLSIKPSLEYSINTIASVSRI-KWRPQRKFHLASCSLVVDSSVNVWD 257
VW + + YS+ R K+ P + + SCS D ++ +WD
Sbjct: 128 VWSM-FRQRFLYSLYRHTHWVRCAKFSPDGRL-IVSCS--EDKTIKIWD 172
Score = 133 (51.9 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 39/159 (24%), Positives = 77/159 (48%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRT--VNKVSFHYVESNWLISGSQDGTMRL 124
+ T + + ++ VW++ +Q +++ ++ T V F + ++S S+D T+++
Sbjct: 117 LVTASEDKSIKVWSM-----FRQRFLYSLYRHTHWVRCAKFS-PDGRLIVSCSEDKTIKI 170
Query: 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHS 184
+D ++ F + V+FNP+ AS + ++ WD+R K + HS
Sbjct: 171 WDTTNKQCVNNFSDSVGFANFVDFNPNGT-CIASAGSDHAVKIWDIRM-NKLLQHYQVHS 228
Query: 185 GPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI 223
+ +HP L TAS D T+K+ DL I+ L Y++
Sbjct: 229 CGVNCLSFHPLGNSLVTASSDGTVKMLDL-IEGRLIYTL 266
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 182 (69.1 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 45/169 (26%), Positives = 84/169 (49%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNL------GQISRSKQERVFNDHKRTVNKVSFHYVES 110
++W+ H+ + + + V +W++ G+I +K VF H V V++H +
Sbjct: 182 LSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKA--VFTGHSAVVEDVAWHLLHE 239
Query: 111 NWLISGSQDGTMRLFDIRCQESTKIFH---SNTESVRDVEFNPHSPYAFASVSENGTIQQ 167
+ S + D + ++D R ++K H ++T V + FNP+S + A+ S + T+
Sbjct: 240 SLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVAL 299
Query: 168 WDVRRPEKCFYQFTAHSGPIF-ACDWHPEHAW-LATASRDKTIKVWDLS 214
WD+R + + F +H IF W P + LA++ D+ + VWDLS
Sbjct: 300 WDLRNLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVWDLS 348
Score = 153 (58.9 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 40/175 (22%), Positives = 80/175 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW + E+ + A + +++W+ + SK + + H VN +SF+ L +
Sbjct: 231 DVAWHLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT 290
Query: 116 GSQDGTMRLFDIR-CQESTKIFHSNTESV-RDVEFNPHSPYAFASVSENGTIQQWDVRR- 172
GS D T+ L+D+R + F S+ + + + V ++PH+ AS + + WD+ +
Sbjct: 291 GSADKTVALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNETILASSGTDRRLNVWDLSKI 350
Query: 173 ------------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W + + S D +++W ++
Sbjct: 351 GEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMA 405
Score = 149 (57.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 47/177 (26%), Positives = 84/177 (47%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------RCQESTKIFHSNTESVRDVEF 148
H++ +S++ S L+S S D T+ L+DI + ++ +F ++ V DV +
Sbjct: 175 HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVEDVAW 234
Query: 149 NPHSPYAFASVSENGTIQQWDVRR--PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRD 205
+ F SV+++ + WD R K + AH+ + ++P + LAT S D
Sbjct: 235 HLLHESLFGSVADDQKLMMWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSAD 294
Query: 206 KTIKVWDL-SIKPSLE-YSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
KT+ +WDL ++K L + + + W P + LAS D +NVWD+ +
Sbjct: 295 KTVALWDLRNLKLKLHTFESHKDEIFQVVHWSPHNETILASSG--TDRRLNVWDLSK 349
Score = 131 (51.2 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 158 SVSENGTIQQWDVRRPEK------CFYQFTAHSGPIFACDWHPEHAWL-ATASRDKTIKV 210
S S++ T+ WD+ K FT HS + WH H L + + D+ + +
Sbjct: 194 SASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLMM 253
Query: 211 WDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266
WD + KPS +T A V+ + + P +F LA+ S D +V +WD+R + L
Sbjct: 254 WDTRSNTTSKPSHLVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLH 310
Query: 267 SFTEHKDVVSGLA-WRGDPQLFIASS 291
+F HKD + + W + +ASS
Sbjct: 311 TFESHKDEIFQVVHWSPHNETILASS 336
>WB|WBGene00011051 [details] [associations]
symbol:pfs-2 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0044428 "nuclear part" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0018996 eggNOG:COG2319 GO:GO:0040011
HSSP:P16649 GO:GO:0044428 GeneTree:ENSGT00540000070914 EMBL:Z83120
KO:K15542 RefSeq:NP_496985.1 ProteinModelPortal:Q9NAN8 SMR:Q9NAN8
PaxDb:Q9NAN8 EnsemblMetazoa:R06A4.9.1 EnsemblMetazoa:R06A4.9.2
GeneID:175092 KEGG:cel:CELE_R06A4.9 UCSC:R06A4.9.1 CTD:175092
WormBase:R06A4.9 InParanoid:Q9NAN8 OMA:LTKFIRT NextBio:886718
Uniprot:Q9NAN8
Length = 809
Score = 186 (70.5 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 59/227 (25%), Positives = 96/227 (42%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
V WS E + TG G +WN G + E + H + + + E WL+S
Sbjct: 139 VCWSP-EGKRLITGCQTGEFTLWN-G--TAFNFETILQAHDSAIRALKWASNEQ-WLLSA 193
Query: 117 SQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-PEK 175
Q G ++ + + E++R + F P + FA+ S++GT + WD R E+
Sbjct: 194 DQGGYVKYWQPNMNNAHMFSAHKDEAIRGLAFAP-TDVKFATASDDGTARVWDFARYTEE 252
Query: 176 CFYQFTAHSGPIFACDWHPEHAWLATASRD--KTIKVWDLSIKPSLEYSINTIASVSRIK 233
+ H + DWHP +AT SRD + +K+WD L +SV ++
Sbjct: 253 RVLR--GHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVE 310
Query: 234 WRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAW 280
+ + L D V ++DIR + ++ HK V LAW
Sbjct: 311 FNKNGNWLLTGGR---DHLVKMYDIRMMK-EMRTYRAHKKEVISLAW 353
Score = 163 (62.4 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 44/149 (29%), Positives = 72/149 (48%)
Query: 67 IATGA--TNGAVVVWN--LGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTM 122
IATG+ T V +W+ G + QE HK +V V F+ NWL++G +D +
Sbjct: 274 IATGSRDTQQPVKIWDPKSGSCLATLQE-----HKSSVMAVEFNK-NGNWLLTGGRDHLV 327
Query: 123 RLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA 182
+++DIR + + + ++ + V + ++P F S +G+I W V ++ A
Sbjct: 328 KMYDIRMMKEMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYWMVDGEKEIGLLEHA 387
Query: 183 HSGPIFACDWHPEHAWLATASRDKTIKVW 211
H I++ WHP LAT S D K W
Sbjct: 388 HDQAIWSMKWHPLGHILATGSNDNNTKFW 416
Score = 118 (46.6 bits), Expect = 0.00076, P = 0.00076
Identities = 36/181 (19%), Positives = 72/181 (39%)
Query: 59 WSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHK-RTVNKVSFHYVESNWLISGS 117
W+ E + + G V W +F+ HK + ++F + + + S
Sbjct: 183 WAS-NEQWLLSADQGGYVKYWQ----PNMNNAHMFSAHKDEAIRGLAFAPTDVKFA-TAS 236
Query: 118 QDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPY-AFASVSENGTIQQWDVRRPEKC 176
DGT R++D ++ + VR ++++P A S ++ WD + C
Sbjct: 237 DDGTARVWDFARYTEERVLRGHGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGS-C 295
Query: 177 FYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE-YSINTIASVSRIKWR 235
H + A +++ WL T RD +K++D+ + + Y + +S + W
Sbjct: 296 LATLQEHKSSVMAVEFNKNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVIS-LAWH 354
Query: 236 P 236
P
Sbjct: 355 P 355
>UNIPROTKB|F1RG42 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 CTD:27097 KO:K03130 OMA:YVDSEGP
EMBL:CU468504 RefSeq:XP_001927989.1 ProteinModelPortal:F1RG42
Ensembl:ENSSSCT00000011153 GeneID:100155476 KEGG:ssc:100155476
Uniprot:F1RG42
Length = 589
Score = 184 (69.8 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 51/184 (27%), Positives = 89/184 (48%)
Query: 79 WNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHS 138
W+LG + + ++ H V V S + SGS D T RL+ +I+
Sbjct: 369 WDLGSFTNTV---LYQGHAYPVWDVDISPY-SLYFASGSHDRTARLWSFDRTYPLRIYAG 424
Query: 139 NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAW 198
+ V V+F+P+S Y A+ S + T++ W ++ FT H GP+ + + P +
Sbjct: 425 HLADVDCVKFHPNSNY-LATGSTDKTVRLWSAQQGNSVRL-FTGHRGPVLSLAFSPNGKY 482
Query: 199 LATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
LA+A D+ +K+WDL+ + +++ + + P +AS S+ D+SV VWDI
Sbjct: 483 LASAGEDQRLKLWDLASGTLFKELRGHTDNITSLTFSPDSSL-IASASM--DNSVRVWDI 539
Query: 259 RRPY 262
R +
Sbjct: 540 RNTH 543
Score = 176 (67.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 56/213 (26%), Positives = 96/213 (45%)
Query: 91 RVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNP 150
+V H V F +S+ L+S S+D ++R +D+ +T ++ + V DV+ +P
Sbjct: 336 KVLRGHCGPVYSTRF-LADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISP 394
Query: 151 HSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKV 210
+S Y FAS S + T + W R + H + +HP +LAT S DKT+++
Sbjct: 395 YSLY-FASGSHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 211 WDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTE 270
W S+ V + + P K+ LAS D + +WD+ +
Sbjct: 453 WSAQQGNSVRLFTGHRGPVLSLAFSPNGKY-LASAG--EDQRLKLWDLASGTL-FKELRG 508
Query: 271 HKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIK 303
H D ++ L + D L IAS+ + R +I+
Sbjct: 509 HTDNITSLTFSPDSSL-IASASMDNSVRVWDIR 540
Score = 126 (49.4 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 29/107 (27%), Positives = 56/107 (52%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
N++ATG+T+ V +W+ Q R+F H+ V ++F +L S +D ++L
Sbjct: 439 NYLATGSTDKTVRLWSAQQ---GNSVRLFTGHRGPVLSLAFS-PNGKYLASAGEDQRLKL 494
Query: 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR 171
+D+ K +T+++ + F+P S AS S + +++ WD+R
Sbjct: 495 WDLASGTLFKELRGHTDNITSLTFSPDSSL-IASASMDNSVRVWDIR 540
>ZFIN|ZDB-GENE-030131-5987 [details] [associations]
symbol:taf5l "TAF5-like RNA polymerase II,
p300/CBP-associated factor (PCAF)-associated factor" species:7955
"Danio rerio" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-5987
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 CTD:27097 HOGENOM:HOG000212423
HOVERGEN:HBG050226 KO:K03130 OrthoDB:EOG4NCMCF EMBL:BC056820
IPI:IPI00498551 RefSeq:NP_956146.1 UniGene:Dr.80603
ProteinModelPortal:Q6PGV3 STRING:Q6PGV3 GeneID:334055
KEGG:dre:334055 InParanoid:Q6PGV3 NextBio:20810247
ArrayExpress:Q6PGV3 Uniprot:Q6PGV3
Length = 601
Score = 184 (69.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 52/213 (24%), Positives = 98/213 (46%)
Query: 91 RVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNP 150
+ H V + +F +++ L+S S+D T+R +D++ +T ++ + V DV+ +P
Sbjct: 348 KTLRGHSGPVYRTAF-LTDASGLLSCSEDSTVRYWDLKSFTNTVLYRGHAYPVWDVDVSP 406
Query: 151 HSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKV 210
S Y F++ S + T + W R + H + +HP ++AT S DKT+++
Sbjct: 407 CSLY-FSTASHDRTARLWSFARTYP-LRLYAGHLSDVDCVKFHPNSNYIATGSTDKTVRL 464
Query: 211 WDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTE 270
W S+ V + + P K+ LAS D + +WD+ +
Sbjct: 465 WSTRQGASVRLFTGHRGPVLTLAFSPNGKY-LASAG--EDQRLKLWDLASGGL-FKDLRG 520
Query: 271 HKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIK 303
H D +S L++ D L +AS+ + R +I+
Sbjct: 521 HTDTISSLSFSQDSSL-VASASMDNTVRVWDIR 552
Score = 166 (63.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 47/156 (30%), Positives = 79/156 (50%)
Query: 110 SNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
S + + S D T RL+ +++ + V V+F+P+S Y A+ S + T++ W
Sbjct: 408 SLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNY-IATGSTDKTVRLWS 466
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLS---IKPSLEYSINTI 226
R+ FT H GP+ + P +LA+A D+ +K+WDL+ + L +TI
Sbjct: 467 TRQGASVRL-FTGHRGPVLTLAFSPNGKYLASAGEDQRLKLWDLASGGLFKDLRGHTDTI 525
Query: 227 ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY 262
+S+S Q +AS S+ D++V VWDIR +
Sbjct: 526 SSLSF----SQDSSLVASASM--DNTVRVWDIRNAH 555
Score = 129 (50.5 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 53/225 (23%), Positives = 101/225 (44%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+A G N AV +W+L R+++ + HK V+K+ + + L + D D
Sbjct: 295 LAAGFDNSAVKLWSL----RARKLKA-GPHKADVSKIR---LACDVLEEEADDE-----D 341
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
E K ++ V F + S SE+ T++ WD++ + H+ P
Sbjct: 342 ASGSE-IKTLRGHSGPVYRTAFLTDAS-GLLSCSEDSTVRYWDLKSFTNTVL-YRGHAYP 398
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCS 246
++ D P + +TAS D+T ++W + L ++ V +K+ P + +A+ S
Sbjct: 399 VWDVDVSPCSLYFSTASHDRTARLWSFARTYPLRLYAGHLSDVDCVKFHPNSNY-IATGS 457
Query: 247 LVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
D +V +W R+ + FT H+ V LA+ + + ++AS+
Sbjct: 458 --TDKTVRLWSTRQG-ASVRLFTGHRGPVLTLAFSPNGK-YLASA 498
Score = 122 (48.0 bits), Expect = 0.00019, P = 0.00019
Identities = 30/107 (28%), Positives = 55/107 (51%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
N+IATG+T+ V +W+ Q R+F H+ V ++F +L S +D ++L
Sbjct: 451 NYIATGSTDKTVRLWSTRQ---GASVRLFTGHRGPVLTLAFS-PNGKYLASAGEDQRLKL 506
Query: 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR 171
+D+ K +T+++ + F+ S AS S + T++ WD+R
Sbjct: 507 WDLASGGLFKDLRGHTDTISSLSFSQDSSLV-ASASMDNTVRVWDIR 552
>UNIPROTKB|O75529 [details] [associations]
symbol:TAF5L "TAF5-like RNA polymerase II
p300/CBP-associated factor-associated factor 65 kDa subunit 5L"
species:9606 "Homo sapiens" [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0033276 "transcription factor TFTC
complex" evidence=IDA] [GO:0030914 "STAGA complex" evidence=IDA]
[GO:0043966 "histone H3 acetylation" evidence=IDA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AJ009770
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003700 EMBL:AL121990 EMBL:CH471098 GO:GO:0003713
GO:GO:0006366 GO:GO:0043966 GO:GO:0030914 GO:GO:0033276
EMBL:AF069736 EMBL:BC041094 IPI:IPI00004325 IPI:IPI00410088
RefSeq:NP_001020418.1 RefSeq:NP_055224.1 UniGene:Hs.270621
ProteinModelPortal:O75529 SMR:O75529 DIP:DIP-28147N IntAct:O75529
STRING:O75529 PhosphoSite:O75529 PaxDb:O75529 PRIDE:O75529
DNASU:27097 Ensembl:ENST00000258281 Ensembl:ENST00000366675
Ensembl:ENST00000366676 GeneID:27097 KEGG:hsa:27097 UCSC:uc001htq.3
UCSC:uc001htr.3 CTD:27097 GeneCards:GC01M229728 HGNC:HGNC:17304
neXtProt:NX_O75529 PharmGKB:PA38223 HOGENOM:HOG000212423
HOVERGEN:HBG050226 InParanoid:O75529 KO:K03130 OMA:YVDSEGP
OrthoDB:EOG4NCMCF PhylomeDB:O75529 ChiTaRS:TAF5L GenomeRNAi:27097
NextBio:49741 ArrayExpress:O75529 Bgee:O75529 CleanEx:HS_TAF5L
Genevestigator:O75529 GermOnline:ENSG00000135801 Uniprot:O75529
Length = 589
Score = 183 (69.5 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 51/184 (27%), Positives = 89/184 (48%)
Query: 79 WNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHS 138
W+LG + + ++ H V + S + SGS D T RL+ +I+
Sbjct: 369 WDLGSFTNTV---LYQGHAYPVWDLDISPY-SLYFASGSHDRTARLWSFDRTYPLRIYAG 424
Query: 139 NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAW 198
+ V V+F+P+S Y A+ S + T++ W ++ FT H GP+ + + P +
Sbjct: 425 HLADVDCVKFHPNSNY-LATGSTDKTVRLWSAQQGNSVRL-FTGHRGPVLSLAFSPNGKY 482
Query: 199 LATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
LA+A D+ +K+WDL+ + +++ + + P +AS S+ D+SV VWDI
Sbjct: 483 LASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSGL-IASASM--DNSVRVWDI 539
Query: 259 RRPY 262
R Y
Sbjct: 540 RNTY 543
Score = 169 (64.5 bits), Expect = 9.8e-10, P = 9.8e-10
Identities = 54/213 (25%), Positives = 96/213 (45%)
Query: 91 RVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNP 150
++ H V F +S+ L+S S+D ++R +D+ +T ++ + V D++ +P
Sbjct: 336 KILRGHCGPVYSTRF-LADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISP 394
Query: 151 HSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKV 210
+S Y FAS S + T + W R + H + +HP +LAT S DKT+++
Sbjct: 395 YSLY-FASGSHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNYLATGSTDKTVRL 452
Query: 211 WDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTE 270
W S+ V + + P K+ LAS D + +WD+ +
Sbjct: 453 WSAQQGNSVRLFTGHRGPVLSLAFSPNGKY-LASAG--EDQRLKLWDLASGTL-YKELRG 508
Query: 271 HKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIK 303
H D ++ L + D L IAS+ + R +I+
Sbjct: 509 HTDNITSLTFSPDSGL-IASASMDNSVRVWDIR 540
Score = 125 (49.1 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 29/107 (27%), Positives = 56/107 (52%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
N++ATG+T+ V +W+ Q R+F H+ V ++F +L S +D ++L
Sbjct: 439 NYLATGSTDKTVRLWSAQQ---GNSVRLFTGHRGPVLSLAFS-PNGKYLASAGEDQRLKL 494
Query: 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR 171
+D+ K +T+++ + F+P S AS S + +++ WD+R
Sbjct: 495 WDLASGTLYKELRGHTDNITSLTFSPDSGL-IASASMDNSVRVWDIR 540
>POMBASE|SPBC15D4.14 [details] [associations]
symbol:taf73 "transcription factor TFIID complex subunit
Taf5-like" species:4896 "Schizosaccharomyces pombe" [GO:0000991
"core RNA polymerase II binding transcription factor activity"
evidence=IC] [GO:0005669 "transcription factor TFIID complex"
evidence=TAS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0030071 "regulation of mitotic
metaphase/anaphase transition" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
PomBase:SPBC15D4.14 GO:GO:0005829 GO:GO:0006355 GO:GO:0030071
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0006367
GO:GO:0000991 GO:GO:0005669 KO:K03130 HOGENOM:HOG000212424
EMBL:AB039954 PIR:T39490 RefSeq:NP_596254.1
ProteinModelPortal:O74319 IntAct:O74319 STRING:O74319
EnsemblFungi:SPBC15D4.14.1 GeneID:2539882 KEGG:spo:SPBC15D4.14
OMA:CATISED OrthoDB:EOG4CRQ92 NextBio:20801027 Uniprot:O74319
Length = 642
Score = 183 (69.5 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 58/233 (24%), Positives = 103/233 (44%)
Query: 58 AWSCIEEN-HIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
A C + + H+ + NG + +G + Q+ H R V VS + +++S
Sbjct: 365 ALGCADSSIHLYSSTNNGPQPL--VGSQNEPLQKSSLIGHTRPVFGVSIS-PQKEFILSC 421
Query: 117 SQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
S+DG RL+ + + + + + DV+F+P Y FA+ S + T + WDV
Sbjct: 422 SEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPFG-YYFATASHDQTARLWDVEHAAP- 479
Query: 177 FYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRP 236
F H + +HP A+LAT S D T ++WD+ ++ + VS +
Sbjct: 480 LRVFVGHQNDVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTVRVFNAHHSPVSALCMSA 539
Query: 237 QRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIA 289
LAS + VWD+R + SF +H +V L++ D ++ ++
Sbjct: 540 DG-LSLASAD--ESGIIKVWDLRSSNQHV-SFVKHSSIVYSLSFSYDNKILVS 588
Score = 162 (62.1 bits), Expect = 7.0e-09, P = 7.0e-09
Identities = 39/154 (25%), Positives = 78/154 (50%)
Query: 66 HIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLF 125
+ AT + + +W+ + + RVF H+ V+ VSFH + +L +GS D T R++
Sbjct: 459 YFATASHDQTARLWD---VEHAAPLRVFVGHQNDVDCVSFH-PNAAYLATGSSDHTTRMW 514
Query: 126 DIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSG 185
D+R + ++F+++ V + + + AS E+G I+ WD+R + F HS
Sbjct: 515 DVRTGGTVRVFNAHHSPVSALCMSADG-LSLASADESGIIKVWDLRSSNQ-HVSFVKHSS 572
Query: 186 PIFACDWHPEHAWLATASRDKTIKVWDLSIKPSL 219
+++ + ++ L + D + WDL+ + +L
Sbjct: 573 IVYSLSFSYDNKILVSGGADTDVNFWDLTYRNNL 606
Score = 137 (53.3 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 42/147 (28%), Positives = 64/147 (43%)
Query: 112 WLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR 171
+ + S D T RL+D+ ++F + V V F+P++ Y A+ S + T + WDVR
Sbjct: 459 YFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAY-LATGSSDHTTRMWDVR 517
Query: 172 RPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSR 231
F AH P+ A + LA+A IKVWDL + + V
Sbjct: 518 TGGTVRV-FNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHSSIVYS 576
Query: 232 IKWRPQRKFHLASCSLVVDSSVNVWDI 258
+ + K L S D+ VN WD+
Sbjct: 577 LSFSYDNKI-LVSGG--ADTDVNFWDL 600
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 180 (68.4 bits), Expect = 2.9e-11, P = 2.9e-11
Identities = 38/165 (23%), Positives = 85/165 (51%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQ---ERVFNDHKRTVNKVSFHYVESNWL 113
++WS ++ H+ +G+ + + +W++ ++K +++F H+ V V++H
Sbjct: 184 LSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLF 243
Query: 114 ISGSQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQWDV 170
S D + ++D+R ++K S ++ V + FNP + + A+ S + T++ +D+
Sbjct: 244 GSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDL 303
Query: 171 RRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
R+ + F +H +F W+P++ LA+ + + VWDLS
Sbjct: 304 RKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLS 348
Score = 178 (67.7 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 51/168 (30%), Positives = 82/168 (48%)
Query: 103 VSFHYVESNWLISGSQDGTMRLFDIRCQESTK------IFHSNTESVRDVEFNPHSPYAF 156
+S+ + L+SGS D + L+DI K IF ++ V DV ++ Y F
Sbjct: 184 LSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLF 243
Query: 157 ASVSENGTIQQWDVRRPE--KCFYQFTAHSGPIFACDWHPEHAWL-ATASRDKTIKVWDL 213
SV ++ + WD+R P K AHS + ++P + W+ AT S DKT+K++DL
Sbjct: 244 GSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDL 303
Query: 214 -SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
+ +L + V ++ W P+ + LASC L + VWD+ R
Sbjct: 304 RKLSTALHTFDSHKEEVFQVGWNPKNETILASCCL--GRRLMVWDLSR 349
Score = 151 (58.2 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 45/176 (25%), Positives = 82/176 (46%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DVAW E + + +++W+L S SK + H VN ++F+ + W+++
Sbjct: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPF-NEWVVA 290
Query: 116 -GSQDGTMRLFDIRCQESTKI--FHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR 172
GS D T++LFD+R + ST + F S+ E V V +NP + AS + WD+ R
Sbjct: 291 TGSTDKTVKLFDLR-KLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
Query: 173 -------------PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
P + + H+ I W+P W +++ + D +++W ++
Sbjct: 350 IDEEQTVEDAEDGPPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMA 405
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 36/143 (25%), Positives = 66/143 (46%)
Query: 158 SVSENGTIQQWDVRRPEK-----CFYQFTAHSGPIFACDWHPEHAWL-ATASRDKTIKVW 211
S S++ I WD+ K F AH G + WH H +L + D+ + +W
Sbjct: 196 SGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW 255
Query: 212 DLSIKPSLEYSINTIAS----VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLAS 267
DL PS + ++ + V+ + + P ++ +A+ S D +V ++D+R+ L +
Sbjct: 256 DLR-SPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGS--TDKTVKLFDLRKLSTALHT 312
Query: 268 FTEHKDVVSGLAWRGDPQLFIAS 290
F HK+ V + W + +AS
Sbjct: 313 FDSHKEEVFQVGWNPKNETILAS 335
>SGD|S000000402 [details] [associations]
symbol:TAF5 "Subunit (90 kDa) of TFIID and SAGA complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0051123 "RNA polymerase
II transcriptional preinitiation complex assembly" evidence=IC]
[GO:0005669 "transcription factor TFIID complex" evidence=IDA]
[GO:0032947 "protein complex scaffold" evidence=IMP] [GO:0000124
"SAGA complex" evidence=IDA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
evidence=IDA] [GO:0016568 "chromatin modification" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016573 "histone
acetylation" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex"
evidence=IDA] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IC]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320
SMART:SM00667 SGD:S000000402 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0003682
EMBL:BK006936 GO:GO:0000124 GO:GO:0046695 InterPro:IPR013720
Pfam:PF08513 EMBL:Z21487 GO:GO:0032947 GO:GO:0043130 GO:GO:0005669
GO:GO:0051123 GeneTree:ENSGT00700000104377 KO:K03130
HOGENOM:HOG000212424 OrthoDB:EOG4S1XG9 EMBL:Z36067 EMBL:AY692890
PIR:S34023 RefSeq:NP_009757.1 PDB:2J49 PDBsum:2J49
ProteinModelPortal:P38129 SMR:P38129 DIP:DIP-740N IntAct:P38129
MINT:MINT-475651 STRING:P38129 PaxDb:P38129 PeptideAtlas:P38129
EnsemblFungi:YBR198C GeneID:852497 KEGG:sce:YBR198C CYGD:YBR198c
OMA:PNINYLA EvolutionaryTrace:P38129 NextBio:971495
Genevestigator:P38129 GermOnline:YBR198C Uniprot:P38129
Length = 798
Score = 188 (71.2 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 62/226 (27%), Positives = 106/226 (46%)
Query: 46 KNINLNFSCNDVAWSC------IEENHIATGATNGAVVVW-NLGQISRSKQE----RVFN 94
+N N + SC D + C ++++I + +G+ + N+ + K E +
Sbjct: 463 QNTNKDMSCLDFSDDCRIAAAGFQDSYIKIWSLDGSSLNNPNIALNNNDKDEDPTCKTLV 522
Query: 95 DHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPY 154
H TV SF ++ +L+SGS+D T+RL+ + + + + V DV F+P Y
Sbjct: 523 GHSGTVYSTSFS-PDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPLGHY 581
Query: 155 AFASVSENGTIQQW--DVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
FA+ S + T + W D P + F H + +HP ++ T S DKT ++WD
Sbjct: 582 -FATASHDQTARLWSCDHIYPLRIF---AGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWD 637
Query: 213 LSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
+S S+ + A V I P ++ L++ S D +NVWDI
Sbjct: 638 VSTGDSVRLFLGHTAPVISIAVCPDGRW-LSTGS--EDGIINVWDI 680
Score = 159 (61.0 bits), Expect = 8.3e-08, Sum P(2) = 8.3e-08
Identities = 50/188 (26%), Positives = 90/188 (47%)
Query: 37 VETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDH 96
++TH V + N DV++S + ++ AT + + +W+ I R+F H
Sbjct: 554 MDTHTALVSYKGH-NHPVWDVSFSPLG-HYFATASHDQTARLWSCDHIYPL---RIFAGH 608
Query: 97 KRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAF 156
V+ VSFH ++ +GS D T R++D+ +S ++F +T V + P +
Sbjct: 609 LNDVDCVSFH-PNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCPDGRW-L 666
Query: 157 ASVSENGTIQQWDVRRPEKCFYQFTAHS-GPIFACDWHPEHAWLATASRDKTIKVWDL-- 213
++ SE+G I WD+ ++ Q H I++ + E L + D T++VWDL
Sbjct: 667 STGSEDGIINVWDIGTGKR-LKQMRGHGKNAIYSLSYSKEGNVLISGGADHTVRVWDLKK 725
Query: 214 -SIKPSLE 220
+ +PS E
Sbjct: 726 ATTEPSAE 733
Score = 158 (60.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 50/202 (24%), Positives = 90/202 (44%)
Query: 63 EENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTM 122
+ ++ +G+ + V +W++ + + H V VSF + ++ + S D T
Sbjct: 536 DNKYLLSGSEDKTVRLWSMDTHTALVS---YKGHNHPVWDVSFSPL-GHYFATASHDQTA 591
Query: 123 RLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA 182
RL+ +IF + V V F+P+ Y F S+ T + WDV + F
Sbjct: 592 RLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYVFTGSSDK-TCRMWDVSTGDSVRL-FLG 649
Query: 183 HSGPIFACDWHPEHAWLATASRDKTIKVWDLS----IKPSLEYSINTIASVSRIKWRPQR 238
H+ P+ + P+ WL+T S D I VWD+ +K + N I S+S K +
Sbjct: 650 HTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSK---EG 706
Query: 239 KFHLASCSLVVDSSVNVWDIRR 260
++ + D +V VWD+++
Sbjct: 707 NVLISGGA---DHTVRVWDLKK 725
Score = 37 (18.1 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 6/18 (33%), Positives = 12/18 (66%)
Query: 11 GLKADNGLAQPSRNVFKI 28
G K D+ L+ P+R++ +
Sbjct: 406 GEKKDSNLSSPARDILPL 423
>ASPGD|ASPL0000006005 [details] [associations]
symbol:AN5972 species:162425 "Emericella nidulans"
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0043130
"ubiquitin binding" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0032511 "late endosome to vacuole
transport via multivesicular body sorting pathway" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001301
InterPro:IPR011044 SUPFAM:SSF50969 HOGENOM:HOG000163444
InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
ProteinModelPortal:C8V3C4 EnsemblFungi:CADANIAT00007048
Uniprot:C8V3C4
Length = 853
Score = 184 (69.8 bits), Expect = 3.4e-11, P = 3.4e-11
Identities = 55/232 (23%), Positives = 104/232 (44%)
Query: 64 ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMR 123
E I T +G V +W+ S K + + R ++ NW++ GS D +R
Sbjct: 25 EPWILTTLYSGHVYIWSYETQSIIKTFELTDVPVRAGRFIA----RKNWIVCGSDDFQLR 80
Query: 124 LFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAH 183
+++ E F ++ + +R + +P P+ + S++ TI+ WD + KC + H
Sbjct: 81 IYNYNTSEKIASFEAHPDYIRSIAVHPTQPFVLTA-SDDMTIKLWDWEKGWKCVQVYEGH 139
Query: 184 SGPIFACDWHPEHA-WLATASRDKTIKVWDLSIKPSLEYSINT--IASVSRIKWRPQR-K 239
S + +P+ A+A D+T+K+W L P +++ V+ + + PQ K
Sbjct: 140 SHYVMGLAINPKDTNTFASACLDRTVKIWSLG-SPHANFTLEAHETKGVNHVDYYPQADK 198
Query: 240 FHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+L + S D +V VWD + +A+ H VS + + + I+ S
Sbjct: 199 PYLLTTS--DDKTVKVWDYTTKAL-IATLEGHTSNVSFACYHPELPVIISGS 247
Score = 123 (48.4 bits), Expect = 0.00023, P = 0.00023
Identities = 38/171 (22%), Positives = 80/171 (46%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ T + + + +W+ + + Q V+ H V ++ + ++N S D T++++
Sbjct: 112 VLTASDDMTIKLWDWEKGWKCVQ--VYEGHSHYVMGLAINPKDTNTFASACLDRTVKIWS 169
Query: 127 IRCQESTKIFHSN-TESVRDVEFNPHS--PYAFASVSENGTIQQWDVRRPEKCFYQFTAH 183
+ + ++ T+ V V++ P + PY + S++ T++ WD + H
Sbjct: 170 LGSPHANFTLEAHETKGVNHVDYYPQADKPYLLTT-SDDKTVKVWDYTT-KALIATLEGH 227
Query: 184 SGPI-FACDWHPEHAWLATASRDKTIKVWDLS---IKPSLEYSINTIASVS 230
+ + FAC +HPE + + S D TIK+W + ++ SL Y + VS
Sbjct: 228 TSNVSFAC-YHPELPVIISGSEDGTIKIWHANTYRLEQSLSYGLERAWCVS 277
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 181 (68.8 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 63/268 (23%), Positives = 123/268 (45%)
Query: 34 TEFVETHNLRVG-KNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNL-GQISRSKQER 91
T+ V H +R G ++ N + W+ + +ATG+ +G +W G ++ +
Sbjct: 221 TQLVLRHCIREGGHDVPSNKDVTSLDWNS-DGTLLATGSYDGFARIWTEDGNLAST---- 275
Query: 92 VFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPH 151
HK + + ++ + N+++S D T ++D E+ + F ++ DV++ +
Sbjct: 276 -LGQHKGPIFALKWNK-KGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN 333
Query: 152 SPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVW 211
+ +A S + + RP K F H+ + A W P LA+ S D T+K+W
Sbjct: 334 TTFASCSTDMCIHVCRLGCDRPVKTFQ---GHTNEVNAIKWDPSGMLLASCSDDMTLKIW 390
Query: 212 DLSIKPSLEYSINTIAS-VSRIKW--------RPQRKFHLASCSLVVDSSVNVWDIRRPY 262
+ + + + + + + IKW P LAS S DS+V +WD+ R
Sbjct: 391 SMK-QDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASF--DSTVRLWDVERG- 446
Query: 263 IPLASFTEHKDVVSGLAWRGDPQLFIAS 290
+ L + T+H++ V +A+ D + ++AS
Sbjct: 447 VCLHTLTKHQEPVYSVAFSPDGK-YLAS 473
Score = 163 (62.4 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 52/214 (24%), Positives = 97/214 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV W A+ +T+ + V LG + + F H VN + + S L++
Sbjct: 327 DVDWQ--NNTTFASCSTDMCIHVCRLGC---DRPVKTFQGHTNEVNAIKWD--PSGMLLA 379
Query: 116 G-SQDGTMRLFDIRCQESTKIFHSNTESVRDVEF--------NPHSPYAFASVSENGTIQ 166
S D T++++ ++ ++++ + +++ NP+S AS S + T++
Sbjct: 380 SCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVR 439
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTI 226
WDV R C + T H P+++ + P+ +LA+ S DK + +W+ SL +S
Sbjct: 440 LWDVERGV-CLHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQ-SGSLVHSYRGT 497
Query: 227 ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
+ + W + AS S D SV V D+R+
Sbjct: 498 GGIFEVCWNARGDKVGASAS---DGSVCVLDLRK 528
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 55/215 (25%), Positives = 91/215 (42%)
Query: 58 AWSCIEENHIATGATNGAVVVWNLGQISRSKQERVF-------NDHKRTVNK--VSFHYV 108
AW+ + + +A+G+ + +WNL + S ++ H NK S +
Sbjct: 190 AWNPVSDL-LASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWN 248
Query: 109 ESNWLIS-GSQDGTMRLF-DIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQ 166
L++ GS DG R++ + ST H + +++N Y ++ + TI
Sbjct: 249 SDGTLLATGSYDGFARIWTEDGNLASTLGQHKGP--IFALKWNKKGNYILSAGVDKTTII 306
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINT 225
WD E QF HS P DW + A+ S D I V L +P + +T
Sbjct: 307 -WDAHTGE-AKQQFPFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHT 363
Query: 226 IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
V+ IKW P LASCS D ++ +W +++
Sbjct: 364 -NEVNAIKWDPSGML-LASCS--DDMTLKIWSMKQ 394
>UNIPROTKB|E1BT84 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 OMA:TVMEVKL EMBL:AADN02024425
IPI:IPI00586005 ProteinModelPortal:E1BT84
Ensembl:ENSGALT00000003177 Uniprot:E1BT84
Length = 1323
Score = 186 (70.5 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 56/228 (24%), Positives = 101/228 (44%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
V W+ E + TGA++G +WN G E + H V +++ + + W+++
Sbjct: 125 VRWTP-EGRRLVTGASSGEFTLWN-GLTFNF--ETILQAHDSPVRAMTWSHNDM-WMLTA 179
Query: 117 SQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
G ++ + + K+F ++ E++R+ F+P + FA+ S++GT++ WD R C
Sbjct: 180 DHGGYVKYWQSN-MNNVKMFQAHKEAIREASFSP-TDNKFATCSDDGTVRIWDFLR---C 234
Query: 177 FYQ--FTAHSGPIFACDWHPEHAWLATASRD--KTIKVWDLSIKPSLEYSINTIASVSRI 232
+ H + DWHP + + S+D + IK WD SL +V +
Sbjct: 235 HEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEV 294
Query: 233 KWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAW 280
K + L + D ++DIR L F HK + +AW
Sbjct: 295 KLNLNGNWLLTASR---DHLCKLFDIRNLKEELQVFRGHKKEATAVAW 339
Score = 166 (63.5 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 49/200 (24%), Positives = 89/200 (44%)
Query: 35 EFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFN 94
+F+ H R+ + + C D W + + +G+ + + + +
Sbjct: 230 DFLRCHEERILRGHGADVKCVD--WHPTK-GLVVSGSKDSQQPI-KFWDPKTGQSLATLH 285
Query: 95 DHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSP 153
HK TV +V + + NWL++ S+D +LFDIR +E ++F + + V ++P
Sbjct: 286 AHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHE 344
Query: 154 YAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
FAS +G++ W V ++ AH G I++ WHP L + S D T K W
Sbjct: 345 GLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTR 404
Query: 214 SI---KPSLEYSINTIASVS 230
+ K Y++N + +S
Sbjct: 405 NRPGDKMRDRYNLNLLPGMS 424
>UNIPROTKB|F1LT09 [details] [associations]
symbol:Wdr33 "Protein Wdr33" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1309230 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 IPI:IPI00189285 PRIDE:F1LT09
Ensembl:ENSRNOT00000017075 ArrayExpress:F1LT09 Uniprot:F1LT09
Length = 1327
Score = 186 (70.5 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 56/228 (24%), Positives = 101/228 (44%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
V W+ E + TGA++G +WN G E + H V +++ + + W+++
Sbjct: 121 VRWTP-EGRRLVTGASSGEFTLWN-GLTFNF--ETILQAHDSPVRAMTWSHNDM-WMLTA 175
Query: 117 SQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
G ++ + + K+F ++ E++R+ F+P + FA+ S++GT++ WD R C
Sbjct: 176 DHGGYVKYWQSN-MNNVKMFQAHKEAIREASFSP-TDNKFATCSDDGTVRIWDFLR---C 230
Query: 177 FYQ--FTAHSGPIFACDWHPEHAWLATASRD--KTIKVWDLSIKPSLEYSINTIASVSRI 232
+ H + DWHP + + S+D + IK WD SL +V +
Sbjct: 231 HEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEV 290
Query: 233 KWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAW 280
K + L + D ++DIR L F HK + +AW
Sbjct: 291 KLNLNGNWLLTASR---DHLCKLFDIRNLKEELQVFRGHKKEATAVAW 335
Score = 166 (63.5 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 49/200 (24%), Positives = 89/200 (44%)
Query: 35 EFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFN 94
+F+ H R+ + + C D W + + +G+ + + + +
Sbjct: 226 DFLRCHEERILRGHGADVKCVD--WHPTK-GLVVSGSKDSQQPI-KFWDPKTGQSLATLH 281
Query: 95 DHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSP 153
HK TV +V + + NWL++ S+D +LFDIR +E ++F + + V ++P
Sbjct: 282 AHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHE 340
Query: 154 YAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
FAS +G++ W V ++ AH G I++ WHP L + S D T K W
Sbjct: 341 GLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTR 400
Query: 214 SI---KPSLEYSINTIASVS 230
+ K Y++N + +S
Sbjct: 401 NRPGDKMRDRYNLNLLPGMS 420
>MGI|MGI:1921570 [details] [associations]
symbol:Wdr33 "WD repeat domain 33" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005581
"collagen" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1921570 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0006397
GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391 HSSP:P16649
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
ChiTaRS:WDR33 EMBL:AB086191 EMBL:AK031786 EMBL:AK050653
EMBL:AC124393 EMBL:AC131761 EMBL:AC161511 IPI:IPI00170242
RefSeq:NP_083142.2 UniGene:Mm.277705 ProteinModelPortal:Q8K4P0
SMR:Q8K4P0 PhosphoSite:Q8K4P0 PRIDE:Q8K4P0
Ensembl:ENSMUST00000025264 GeneID:74320 KEGG:mmu:74320
UCSC:uc008eis.2 HOGENOM:HOG000148601 HOVERGEN:HBG054623
InParanoid:Q8C7C6 NextBio:340445 Bgee:Q8K4P0 Genevestigator:Q8K4P0
Uniprot:Q8K4P0
Length = 1330
Score = 186 (70.5 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 56/228 (24%), Positives = 101/228 (44%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
V W+ E + TGA++G +WN G E + H V +++ + + W+++
Sbjct: 125 VRWTP-EGRRLVTGASSGEFTLWN-GLTFNF--ETILQAHDSPVRAMTWSHNDM-WMLTA 179
Query: 117 SQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
G ++ + + K+F ++ E++R+ F+P + FA+ S++GT++ WD R C
Sbjct: 180 DHGGYVKYWQSN-MNNVKMFQAHKEAIREASFSP-TDNKFATCSDDGTVRIWDFLR---C 234
Query: 177 FYQ--FTAHSGPIFACDWHPEHAWLATASRD--KTIKVWDLSIKPSLEYSINTIASVSRI 232
+ H + DWHP + + S+D + IK WD SL +V +
Sbjct: 235 HEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEV 294
Query: 233 KWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAW 280
K + L + D ++DIR L F HK + +AW
Sbjct: 295 KLNLNGNWLLTASR---DHLCKLFDIRNLKEELQVFRGHKKEATAVAW 339
Score = 166 (63.5 bits), Expect = 6.5e-09, P = 6.5e-09
Identities = 49/200 (24%), Positives = 89/200 (44%)
Query: 35 EFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFN 94
+F+ H R+ + + C D W + + +G+ + + + +
Sbjct: 230 DFLRCHEERILRGHGADVKCVD--WHPTK-GLVVSGSKDSQQPI-KFWDPKTGQSLATLH 285
Query: 95 DHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSP 153
HK TV +V + + NWL++ S+D +LFDIR +E ++F + + V ++P
Sbjct: 286 AHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHE 344
Query: 154 YAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
FAS +G++ W V ++ AH G I++ WHP L + S D T K W
Sbjct: 345 GLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTR 404
Query: 214 SI---KPSLEYSINTIASVS 230
+ K Y++N + +S
Sbjct: 405 NRPGDKMRDRYNLNLLPGMS 424
>UNIPROTKB|E1BCT7 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR008160 Pfam:PF01391
GeneTree:ENSGT00540000070914 KO:K15542 CTD:55339 OMA:TVMEVKL
EMBL:DAAA02003882 EMBL:DAAA02003883 EMBL:DAAA02003884
IPI:IPI00689135 RefSeq:NP_001193007.1 UniGene:Bt.32571
ProteinModelPortal:E1BCT7 Ensembl:ENSBTAT00000007859 GeneID:541270
KEGG:bta:541270 NextBio:20879105 Uniprot:E1BCT7
Length = 1336
Score = 186 (70.5 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 56/228 (24%), Positives = 101/228 (44%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
V W+ E + TGA++G +WN G E + H V +++ + + W+++
Sbjct: 125 VRWTP-EGRRLVTGASSGEFTLWN-GLTFNF--ETILQAHDSPVRAMTWSHNDM-WMLTA 179
Query: 117 SQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
G ++ + + K+F ++ E++R+ F+P + FA+ S++GT++ WD R C
Sbjct: 180 DHGGYVKYWQSN-MNNVKMFQAHKEAIREASFSP-TDNKFATCSDDGTVRIWDFLR---C 234
Query: 177 FYQ--FTAHSGPIFACDWHPEHAWLATASRD--KTIKVWDLSIKPSLEYSINTIASVSRI 232
+ H + DWHP + + S+D + IK WD SL +V +
Sbjct: 235 HEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEV 294
Query: 233 KWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAW 280
K + L + D ++DIR L F HK + +AW
Sbjct: 295 KLNLNGNWLLTASR---DHLCKLFDIRNLKEELQVFRGHKKEATAVAW 339
Score = 166 (63.5 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 49/200 (24%), Positives = 89/200 (44%)
Query: 35 EFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFN 94
+F+ H R+ + + C D W + + +G+ + + + +
Sbjct: 230 DFLRCHEERILRGHGADVKCVD--WHPTK-GLVVSGSKDSQQPI-KFWDPKTGQSLATLH 285
Query: 95 DHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSP 153
HK TV +V + + NWL++ S+D +LFDIR +E ++F + + V ++P
Sbjct: 286 AHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHE 344
Query: 154 YAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
FAS +G++ W V ++ AH G I++ WHP L + S D T K W
Sbjct: 345 GLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTR 404
Query: 214 SI---KPSLEYSINTIASVS 230
+ K Y++N + +S
Sbjct: 405 NRPGDKMRDRYNLNLLPGMS 424
>UNIPROTKB|F1PV59 [details] [associations]
symbol:WDR33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR008160
Pfam:PF01391 GeneTree:ENSGT00540000070914 KO:K15542 OMA:TVMEVKL
EMBL:AAEX03011835 RefSeq:XP_003639747.1 ProteinModelPortal:F1PV59
Ensembl:ENSCAFT00000006945 GeneID:100856093 KEGG:cfa:100856093
Uniprot:F1PV59
Length = 1336
Score = 186 (70.5 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 56/228 (24%), Positives = 101/228 (44%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
V W+ E + TGA++G +WN G E + H V +++ + + W+++
Sbjct: 125 VRWTP-EGRRLVTGASSGEFTLWN-GLTFNF--ETILQAHDSPVRAMTWSHNDM-WMLTA 179
Query: 117 SQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
G ++ + + K+F ++ E++R+ F+P + FA+ S++GT++ WD R C
Sbjct: 180 DHGGYVKYWQSN-MNNVKMFQAHKEAIREASFSP-TDNKFATCSDDGTVRIWDFLR---C 234
Query: 177 FYQ--FTAHSGPIFACDWHPEHAWLATASRD--KTIKVWDLSIKPSLEYSINTIASVSRI 232
+ H + DWHP + + S+D + IK WD SL +V +
Sbjct: 235 HEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEV 294
Query: 233 KWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAW 280
K + L + D ++DIR L F HK + +AW
Sbjct: 295 KLNLNGNWLLTASR---DHLCKLFDIRNLKEELQVFRGHKKEATAVAW 339
Score = 166 (63.5 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 49/200 (24%), Positives = 89/200 (44%)
Query: 35 EFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFN 94
+F+ H R+ + + C D W + + +G+ + + + +
Sbjct: 230 DFLRCHEERILRGHGADVKCVD--WHPTK-GLVVSGSKDSQQPI-KFWDPKTGQSLATLH 285
Query: 95 DHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSP 153
HK TV +V + + NWL++ S+D +LFDIR +E ++F + + V ++P
Sbjct: 286 AHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHE 344
Query: 154 YAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
FAS +G++ W V ++ AH G I++ WHP L + S D T K W
Sbjct: 345 GLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTR 404
Query: 214 SI---KPSLEYSINTIASVS 230
+ K Y++N + +S
Sbjct: 405 NRPGDKMRDRYNLNLLPGMS 424
>UNIPROTKB|Q9C0J8 [details] [associations]
symbol:WDR33 "pre-mRNA 3' end processing protein WDR33"
species:9606 "Homo sapiens" [GO:0005581 "collagen" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006301 "postreplication repair" evidence=NAS]
[GO:0007283 "spermatogenesis" evidence=NAS] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 GO:GO:0007283
EMBL:CH471103 GO:GO:0005581 InterPro:IPR008160 Pfam:PF01391
GO:GO:0006301 KO:K15542 EMBL:AC006011 EMBL:AB044749 EMBL:AK002156
EMBL:AK223319 EMBL:BC005401 EMBL:BC013990 EMBL:BC068484
EMBL:AL834365 IPI:IPI00106567 IPI:IPI00385811 IPI:IPI00432450
RefSeq:NP_001006623.1 RefSeq:NP_001006624.1 RefSeq:NP_060853.3
UniGene:Hs.554831 ProteinModelPortal:Q9C0J8 SMR:Q9C0J8
IntAct:Q9C0J8 PhosphoSite:Q9C0J8 DMDM:209572695 PaxDb:Q9C0J8
PRIDE:Q9C0J8 Ensembl:ENST00000322313 Ensembl:ENST00000393006
Ensembl:ENST00000409658 GeneID:55339 KEGG:hsa:55339 UCSC:uc002tpg.2
UCSC:uc002tpi.2 CTD:55339 GeneCards:GC02M128458 HGNC:HGNC:25651
HPA:HPA026897 neXtProt:NX_Q9C0J8 PharmGKB:PA134943440
HOGENOM:HOG000126810 HOVERGEN:HBG062379 InParanoid:Q9C0J8
OMA:TVMEVKL OrthoDB:EOG4V6ZG7 PhylomeDB:Q9C0J8 ChiTaRS:WDR33
GenomeRNAi:55339 NextBio:59651 ArrayExpress:Q9C0J8 Bgee:Q9C0J8
CleanEx:HS_WDR33 Genevestigator:Q9C0J8 GermOnline:ENSG00000136709
Uniprot:Q9C0J8
Length = 1336
Score = 186 (70.5 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 56/228 (24%), Positives = 101/228 (44%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
V W+ E + TGA++G +WN G E + H V +++ + + W+++
Sbjct: 125 VRWTP-EGRRLVTGASSGEFTLWN-GLTFNF--ETILQAHDSPVRAMTWSHNDM-WMLTA 179
Query: 117 SQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
G ++ + + K+F ++ E++R+ F+P + FA+ S++GT++ WD R C
Sbjct: 180 DHGGYVKYWQSN-MNNVKMFQAHKEAIREASFSP-TDNKFATCSDDGTVRIWDFLR---C 234
Query: 177 FYQ--FTAHSGPIFACDWHPEHAWLATASRD--KTIKVWDLSIKPSLEYSINTIASVSRI 232
+ H + DWHP + + S+D + IK WD SL +V +
Sbjct: 235 HEERILRGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEV 294
Query: 233 KWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAW 280
K + L + D ++DIR L F HK + +AW
Sbjct: 295 KLNLNGNWLLTASR---DHLCKLFDIRNLKEELQVFRGHKKEATAVAW 339
Score = 166 (63.5 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 49/200 (24%), Positives = 89/200 (44%)
Query: 35 EFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFN 94
+F+ H R+ + + C D W + + +G+ + + + +
Sbjct: 230 DFLRCHEERILRGHGADVKCVD--WHPTK-GLVVSGSKDSQQPI-KFWDPKTGQSLATLH 285
Query: 95 DHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPHSP 153
HK TV +V + + NWL++ S+D +LFDIR +E ++F + + V ++P
Sbjct: 286 AHKNTVMEVKLN-LNGNWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHE 344
Query: 154 YAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
FAS +G++ W V ++ AH G I++ WHP L + S D T K W
Sbjct: 345 GLFASGGSDGSLLFWHVGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTR 404
Query: 214 SI---KPSLEYSINTIASVS 230
+ K Y++N + +S
Sbjct: 405 NRPGDKMRDRYNLNLLPGMS 424
>SGD|S000000399 [details] [associations]
symbol:MSI1 "Subunit of chromatin assembly factor I (CAF-1)"
species:4932 "Saccharomyces cerevisiae" [GO:0033186 "CAF-1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0006335 "DNA
replication-dependent nucleosome assembly" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000399 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936 EMBL:Z21487
GO:GO:0006335 GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 EMBL:M27300 EMBL:Z36064 EMBL:AY692834
PIR:S07865 RefSeq:NP_009754.1 ProteinModelPortal:P13712 SMR:P13712
DIP:DIP-338N IntAct:P13712 MINT:MINT-386252 STRING:P13712
PaxDb:P13712 PeptideAtlas:P13712 EnsemblFungi:YBR195C GeneID:852494
KEGG:sce:YBR195C CYGD:YBR195c OMA:MPDVTKT OrthoDB:EOG44TSHP
NextBio:971486 Genevestigator:P13712 GermOnline:YBR195C
Uniprot:P13712
Length = 422
Score = 179 (68.1 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 60/238 (25%), Positives = 104/238 (43%)
Query: 30 LIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQ 89
+I+D E ++T + +IN +AW+ +E + + +NG V VW++ Q S
Sbjct: 186 VIQDVEAMDTSSA----DIN---EATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENP 238
Query: 90 ----ERV-FNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTES-- 142
V N VN V++ + + ++ + L D+R ++ K+ SN E
Sbjct: 239 IIDLPLVSINSDGTAVNDVTWMPTHDSLFAACTEGNAVSLLDLRTKKE-KL-QSNREKHD 296
Query: 143 --VRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEH-AWL 199
V FN + AS NG + WD+R K H + +W P L
Sbjct: 297 GGVNSCRFNYKNSLILASADSNGRLNLWDIRNMNKSPIATMEHGTSVSTLEWSPNFDTVL 356
Query: 200 ATASR-DKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVW 256
ATA + D +K+WD S + ++ + V+ I W + + CS+ D+SV++W
Sbjct: 357 ATAGQEDGLVKLWDTSCEETIFTHGGHMLGVNDISWDAHDPWLM--CSVANDNSVHIW 412
>UNIPROTKB|G3V1X0 [details] [associations]
symbol:POC1B "POC1 centriolar protein homolog B"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:CH471054
EMBL:AC010201 EMBL:AC025034 UniGene:Hs.25130 KO:K16482 CTD:282809
UniGene:Hs.604487 GeneID:282809 KEGG:hsa:282809 HGNC:HGNC:30836
ChiTaRS:POC1B GenomeRNAi:282809 NextBio:93521 RefSeq:NP_001186706.1
ProteinModelPortal:G3V1X0 SMR:G3V1X0 Ensembl:ENST00000549035
ArrayExpress:G3V1X0 Bgee:G3V1X0 Uniprot:G3V1X0
Length = 436
Score = 179 (68.1 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 57/217 (26%), Positives = 104/217 (47%)
Query: 77 VVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLF--DIRCQESTK 134
++WN +R+ + + HK V V F N L S S+D T+RL+ D R + S
Sbjct: 1 MLWNFKPHARAYR---YVGHKDVVTSVQFS-PHGNLLASASRDRTVRLWIPDKRGKFSE- 55
Query: 135 IFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHP 194
F ++T VR V+F+ + A+ SE+ +I+ W + R ++ Y H+ + + P
Sbjct: 56 -FKAHTAPVRSVDFSADGQF-LATASEDKSIKVWSMYR-QRFLYSLYRHTHWVRCAKFSP 112
Query: 195 EHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
+ + + S DKTIK+WD + K + +++ + + + P +AS D +V
Sbjct: 113 DGRLIVSCSEDKTIKIWDTTNKQCVNNFSDSVGFANFVDFNPSGTC-IASAGS--DQTVK 169
Query: 255 VWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
VWD+R + L + H V+ +++ I +S
Sbjct: 170 VWDVRVNKL-LQHYQVHSGGVNCISFHPSGNYLITAS 205
Score = 159 (61.0 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 48/195 (24%), Positives = 94/195 (48%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
N +A+ + + V +W + R K F H V V F + +L + S+D ++++
Sbjct: 31 NLLASASRDRTVRLWIPDK--RGKFSE-FKAHTAPVRSVDFS-ADGQFLATASEDKSIKV 86
Query: 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHS 184
+ + Q + +T VR +F+P S SE+ TI+ WD ++C F+
Sbjct: 87 WSMYRQRFLYSLYRHTHWVRCAKFSPDGRL-IVSCSEDKTIKIWDTTN-KQCVNNFSDSV 144
Query: 185 GPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE-YSINTIASVSRIKWRPQRKFHLA 243
G D++P +A+A D+T+KVWD+ + L+ Y +++ V+ I + P + +
Sbjct: 145 GFANFVDFNPSGTCIASAGSDQTVKVWDVRVNKLLQHYQVHS-GGVNCISFHPSGNYLIT 203
Query: 244 SCSLVVDSSVNVWDI 258
+ S D ++ + D+
Sbjct: 204 ASS---DGTLKILDL 215
>ZFIN|ZDB-GENE-040426-2787 [details] [associations]
symbol:plrg1 "pleiotropic regulator 1"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043518 "negative regulation of DNA
damage response, signal transduction by p53 class mediator"
evidence=IGI;IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2787 GO:GO:0043066
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0043518
GeneTree:ENSGT00700000104496 EMBL:AL935184 IPI:IPI00993121
ProteinModelPortal:F1R5Z8 Ensembl:ENSDART00000125834
ArrayExpress:F1R5Z8 Bgee:F1R5Z8 Uniprot:F1R5Z8
Length = 519
Score = 180 (68.4 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 56/207 (27%), Positives = 91/207 (43%)
Query: 88 KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVE 147
K RV + H V ++ + W ++GS D T++++D+ + + +VR V
Sbjct: 199 KLYRVISGHLGWVRSIAVE-PGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVA 257
Query: 148 FNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKT 207
+ SPY F S E+ ++ WD+ K + H ++ D HP L T SRD T
Sbjct: 258 VSNRSPYLF-SCGEDKQVKCWDLEY-NKVIRHYHGHLSAVYDLDLHPTIDVLVTCSRDAT 315
Query: 208 IKVWDLSIKPS---LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIP 264
+VWD+ K + L NT+A+V PQ + S D+++ +WD+
Sbjct: 316 ARVWDIRTKANVHTLSGHTNTVATVKCQSAEPQ-VVTVGSH----DTTIRLWDLVAGKTR 370
Query: 265 LASFTEHKDVVSGLAWRGDPQLFIASS 291
A+ T HK V L F + S
Sbjct: 371 -ATLTNHKKSVRALVLHPRQYTFASGS 396
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 178 (67.7 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 47/163 (28%), Positives = 78/163 (47%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
++WS H+ATG N + R + H VN V H + S+ + +
Sbjct: 178 LSWSPHVAGHLATGRDLTTYTKNN----KALQPVRTYTHHSSIVNDVQHHPLHSSLIGTV 233
Query: 117 SQDGTMRLFDIRCQESTKIFHS----NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR 172
S D T+++ D R E+T+ + + +++ + FNP + A+ S + TI WD+R
Sbjct: 234 SDDITLQILDTRVAETTRAAATAEGQHRDAINAIAFNPAAETVLATGSADKTIGLWDLRN 293
Query: 173 PEKCFYQFTAHSGPIFACDWHP-EHAWLATASRDKTIKVWDLS 214
+ + H+ + + WHP E A LA+AS D+ I WDLS
Sbjct: 294 LKTKLHTLENHTDSVTSISWHPFEEAVLASASYDRKIMFWDLS 336
Score = 141 (54.7 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 51/170 (30%), Positives = 79/170 (46%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYA 155
HK+ +S+ + L +G +D T + + + + + ++ V DV+ +P
Sbjct: 171 HKQEGFGLSWSPHVAGHLATG-RDLTTYTKNNKALQPVRTYTHHSSIVNDVQHHPLHSSL 229
Query: 156 FASVSENGTIQQWDVRRPEKCFYQFTA---HSGPIFACDWHPE-HAWLATASRDKTIKVW 211
+VS++ T+Q D R E TA H I A ++P LAT S DKTI +W
Sbjct: 230 IGTVSDDITLQILDTRVAETTRAAATAEGQHRDAINAIAFNPAAETVLATGSADKTIGLW 289
Query: 212 DL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
DL ++K L N SV+ I W P + LAS S D + WD+ R
Sbjct: 290 DLRNLKTKLHTLENHTDSVTSISWHPFEEAVLASASY--DRKIMFWDLSR 337
Score = 124 (48.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 34/135 (25%), Positives = 62/135 (45%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKI--FHSNTESVRDVEFNPHSP 153
H+ +N ++F+ L +GS D T+ L+D+R TK+ ++T+SV + ++P
Sbjct: 260 HRDAINAIAFNPAAETVLATGSADKTIGLWDLR-NLKTKLHTLENHTDSVTSISWHPFEE 318
Query: 154 YAFASVSENGTIQQWDVRR-------------PEKCFYQFTAHSGPIFACDWHPEHAW-L 199
AS S + I WD+ R P + + H+ I W+ W L
Sbjct: 319 AVLASASYDRKIMFWDLSRAGEEQTPEDAQDGPPELLFMHGGHTNRISDFSWNLNDPWVL 378
Query: 200 ATASRDKTIKVWDLS 214
+A+ D ++VW ++
Sbjct: 379 CSAAEDNLLQVWKVA 393
>ASPGD|ASPL0000032162 [details] [associations]
symbol:AN8468 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001305 InterPro:IPR018391 SMART:SM00564 InterPro:IPR011044
SUPFAM:SSF50969 EMBL:AACD01000153 HOGENOM:HOG000234485
RefSeq:XP_681737.1 ProteinModelPortal:Q5ATB2
EnsemblFungi:CADANIAT00002953 GeneID:2868693 KEGG:ani:AN8468.2
OMA:VTMGEVE OrthoDB:EOG41K2M8 Uniprot:Q5ATB2
Length = 1364
Score = 185 (70.2 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 66/249 (26%), Positives = 116/249 (46%)
Query: 13 KADNGLAQPSRNVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGAT 72
+ +G+ + FL FV +N + + L + + +S E I
Sbjct: 666 RLQSGIQDDKDSELSKFLYDARRFV-LNNRHLAETAPLQLYSSGLMFS--PEGSITRRIF 722
Query: 73 NGAVVVWN-LGQISR--SKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC 129
N + W+ L ++ + S +++ +H V V F + L+SGS D T++++D
Sbjct: 723 NYNLSGWSQLPKVEQTWSAEQQTLENHLGPVESVVFS-PDGKQLVSGSYDDTVKIWDPAT 781
Query: 130 QESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFA 189
E + ++ +V + F+P AS S + TI WD E F H I++
Sbjct: 782 GELLQTLDGHSGTVESLAFSPDGKL-LASGSYDNTIDLWDSATGE-LLQTFEGHPHSIWS 839
Query: 190 CDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHLASCSLV 248
+ P+ LA+AS D TIK+WDL+ L+ ++++ + SV + + P K LAS SL
Sbjct: 840 VAFAPDGKELASASDDSTIKIWDLATG-ELQQTLDSHSQSVRSVAFSPDGKL-LASSSL- 896
Query: 249 VDSSVNVWD 257
DS++ VW+
Sbjct: 897 -DSTIKVWN 904
Score = 183 (69.5 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 61/240 (25%), Positives = 112/240 (46%)
Query: 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNW 112
S VA+S + +A+ +++ + +WN + + ++ F H + V+F +
Sbjct: 962 SVRSVAFSP-DGKQLASSSSDTTIKLWNS---TTGELQQTFKGHDLWIRAVAFS-PDGKH 1016
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR 172
L+SGS D T++L+D+ E + ++ SV V F+P AS S + TI+ WD
Sbjct: 1017 LVSGSDDNTIKLWDLATSELQQSLEDHSRSVHAVAFSPDDKQ-LASSSLDSTIKLWDSAT 1075
Query: 173 PEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIAS-VSR 231
E HS + + + P+ LA+ S D TIK+W+ + L+ ++ + V
Sbjct: 1076 GE-LQRTLEGHSQGVRSVTFSPDGKLLASNSYDGTIKLWN-PLTGELQQTLTGRSDWVDS 1133
Query: 232 IKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+ + P K LAS DS++ +WD + L + H D + + + D +L + S
Sbjct: 1134 VAFSPDGK-QLASG--YYDSTIKLWDSATGEL-LQTLEGHSDRIQSVVFSPDGKLLASGS 1189
Score = 181 (68.8 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 68/242 (28%), Positives = 114/242 (47%)
Query: 53 SCNDVAWSCIEENHIATGATNGAVVVWN--LGQISRSKQERVFNDHKRTVNKVSFHYVES 110
S VA+S + +A+ + + + VWN G++ +S + R V V+F +
Sbjct: 878 SVRSVAFSP-DGKLLASSSLDSTIKVWNPATGELQQSLEGR-----SGWVKSVAFS-PDG 930
Query: 111 NWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDV 170
L SGS+ T++L++ E + +++SVR V F+P AS S + TI+ W+
Sbjct: 931 KKLASGSEKNTVKLWNPATGELLQTLEGHSQSVRSVAFSPDGKQ-LASSSSDTTIKLWNS 989
Query: 171 RRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SV 229
E F H I A + P+ L + S D TIK+WDL+ L+ S+ + SV
Sbjct: 990 TTGE-LQQTFKGHDLWIRAVAFSPDGKHLVSGSDDNTIKLWDLATS-ELQQSLEDHSRSV 1047
Query: 230 SRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIA 289
+ + P K LAS SL DS++ +WD + + H V + + D +L +
Sbjct: 1048 HAVAFSPDDK-QLASSSL--DSTIKLWDSATGELQ-RTLEGHSQGVRSVTFSPDGKLLAS 1103
Query: 290 SS 291
+S
Sbjct: 1104 NS 1105
Score = 133 (51.9 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 50/194 (25%), Positives = 92/194 (47%)
Query: 67 IATGATNGAVVVWN--LGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
+A+ + +G + +WN G++ ++ R +D V+ V+F + L SG D T++L
Sbjct: 1101 LASNSYDGTIKLWNPLTGELQQTLTGR--SDW---VDSVAFS-PDGKQLASGYYDSTIKL 1154
Query: 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHS 184
+D E + +++ ++ V F+P AS S + T + WD E F HS
Sbjct: 1155 WDSATGELLQTLEGHSDRIQSVVFSPDGKL-LASGSYDQTAKLWDPATGE-LLQIFEGHS 1212
Query: 185 GPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTI-ASVSRIKWRPQRKFHLA 243
+ + + P+ LA++S +TIK+WD + L ++N S + + P LA
Sbjct: 1213 KWVESVAFSPDGKLLASSSYGETIKLWD-PVTGELLQTLNDPDESAGSVAFSPDGN-RLA 1270
Query: 244 SCSLVVDSSVNVWD 257
S + D+ + WD
Sbjct: 1271 SVD-IFDTKI--WD 1281
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 43/154 (27%), Positives = 68/154 (44%)
Query: 143 VRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATA 202
V V F+P S S + T++ WD E HSG + + + P+ LA+
Sbjct: 753 VESVVFSPDGKQ-LVSGSYDDTVKIWDPATGE-LLQTLDGHSGTVESLAFSPDGKLLASG 810
Query: 203 SRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY 262
S D TI +WD + L+ S+ + + P K LAS S DS++ +WD+
Sbjct: 811 SYDNTIDLWDSATGELLQTFEGHPHSIWSVAFAPDGK-ELASAS--DDSTIKIWDLATGE 867
Query: 263 IPLASFTEHKDVVSGLAWRGDPQLFIASSRVSII 296
+ + H V +A+ D +L +SS S I
Sbjct: 868 LQ-QTLDSHSQSVRSVAFSPDGKLLASSSLDSTI 900
>UNIPROTKB|Q6PJI9 [details] [associations]
symbol:WDR59 "WD repeat-containing protein 59" species:9606
"Homo sapiens" [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006575 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50908
SMART:SM00320 SMART:SM00591 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
Gene3D:3.10.110.10 InterPro:IPR016135 OMA:TGGWNIA EMBL:AK022332
EMBL:AK091316 EMBL:AF370390 EMBL:BC004519 EMBL:BC014887
EMBL:AB067510 IPI:IPI00012257 IPI:IPI00242841 IPI:IPI00644331
IPI:IPI00646489 RefSeq:NP_085058.3 UniGene:Hs.280951
ProteinModelPortal:Q6PJI9 SMR:Q6PJI9 IntAct:Q6PJI9 STRING:Q6PJI9
PhosphoSite:Q6PJI9 DMDM:134035358 PaxDb:Q6PJI9 PRIDE:Q6PJI9
Ensembl:ENST00000262144 GeneID:79726 KEGG:hsa:79726 UCSC:uc002fdf.1
UCSC:uc002fdg.1 CTD:79726 GeneCards:GC16M074908 H-InvDB:HIX0013239
HGNC:HGNC:25706 HPA:HPA041084 neXtProt:NX_Q6PJI9
PharmGKB:PA142670593 HOGENOM:HOG000004834 HOVERGEN:HBG092820
InParanoid:Q6PJI9 OrthoDB:EOG4CNQQ9 GenomeRNAi:79726 NextBio:69094
Bgee:Q6PJI9 CleanEx:HS_WDR59 Genevestigator:Q6PJI9 Uniprot:Q6PJI9
Length = 974
Score = 183 (69.5 bits), Expect = 5.3e-11, P = 5.3e-11
Identities = 51/194 (26%), Positives = 93/194 (47%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYA 155
H R ++ + + E + L++ S D + ++DI+ + S V++N +
Sbjct: 104 HTRVISDLDWAVFEPDLLVTSSVDTYIYIWDIKDTRKPTVALSAVAGASQVKWNKKNANC 163
Query: 156 FASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHP--EHAWLATASRDKTIKVWDL 213
A+ S +G ++ WD R+P AH I DWHP EH LAT+S+D ++K WD
Sbjct: 164 LAT-SHDGDVRIWDKRKPSTAVEYLAAHLSKIHGLDWHPDSEHI-LATSSQDNSVKFWDY 221
Query: 214 SIKPSLEYSINTIASVSRIKWRPQ-RKFHLASCSLVV-----DSSVNVWDIRRPYIPLAS 267
+P +Y +N + + W+ + F +++V ++S+ +W++ P+ +
Sbjct: 222 R-QPR-KY-LNILPCQVPV-WKARYTPFSNGLVTVMVPQLRRENSLLLWNVFDLNTPVHT 277
Query: 268 FTEHKDVVSGLAWR 281
F H DVV WR
Sbjct: 278 FVGHDDVVLEFQWR 291
Score = 150 (57.9 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 51/205 (24%), Positives = 91/205 (44%)
Query: 93 FNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHS 152
F D + T +S + + ++SG + + D + KI + + V++NPH
Sbjct: 14 FRDSQATA--MSVDCLGQHAVLSGRRFLYIVNLDAPFEGHRKISRQSKWDIGAVQWNPHD 71
Query: 153 PYAF---ASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHP-EHAWLATASRDKTI 208
+A AS ++ + +W E H+ I DW E L T+S D I
Sbjct: 72 SFAHYFAASSNQRVDLYKWKDGSGE-VGTTLQGHTRVISDLDWAVFEPDLLVTSSVDTYI 130
Query: 209 KVWDL--SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266
+WD+ + KP++ +++ +A S++KW + LA+ D V +WD R+P +
Sbjct: 131 YIWDIKDTRKPTV--ALSAVAGASQVKWNKKNANCLATSH---DGDVRIWDKRKPSTAVE 185
Query: 267 SFTEHKDVVSGLAWRGDPQLFIASS 291
H + GL W D + +A+S
Sbjct: 186 YLAAHLSKIHGLDWHPDSEHILATS 210
Score = 130 (50.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 41/216 (18%), Positives = 103/216 (47%)
Query: 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLI 114
+D+ W+ E + + T + + + +W+ I +++ V ++V ++ +N L
Sbjct: 109 SDLDWAVFEPDLLVTSSVDTYIYIWD---IKDTRKPTVALSAVAGASQVKWNKKNANCLA 165
Query: 115 SGSQDGTMRLFDIRCQESTKIFH--SNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR 172
+ S DG +R++D R + ST + + ++ + ++++P S + A+ S++ +++ WD R+
Sbjct: 166 T-SHDGDVRIWDKR-KPSTAVEYLAAHLSKIHGLDWHPDSEHILATSSQDNSVKFWDYRQ 223
Query: 173 PEKCFYQFTAHSGPIFACDWHPEHAWLATAS-----RDKTIKVWDL-SIKPSLEYSINTI 226
P K + P++ + P L T R+ ++ +W++ + + +
Sbjct: 224 PRK-YLNILPCQVPVWKARYTPFSNGLVTVMVPQLRRENSLLLWNVFDLNTPVHTFVGHD 282
Query: 227 ASVSRIKWRPQRK----FHLASCSLVVDSSVNVWDI 258
V +WR Q++ + L + S D ++ +W +
Sbjct: 283 DVVLEFQWRKQKEGSKDYQLVTWSR--DQTLRMWRV 316
>UNIPROTKB|F1N575 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966
GO:GO:0004402 GO:GO:0030914 GO:GO:0033276
GeneTree:ENSGT00700000104377 OMA:YVDSEGP EMBL:DAAA02061261
EMBL:DAAA02061262 IPI:IPI00905134 Ensembl:ENSBTAT00000048510
ArrayExpress:F1N575 Uniprot:F1N575
Length = 585
Score = 180 (68.4 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 55/213 (25%), Positives = 96/213 (45%)
Query: 91 RVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNP 150
+V H V F +S+ L+S S+D ++R +D+ +T ++ + V D++ +P
Sbjct: 332 KVLRGHCGPVYSTRF-LADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISP 390
Query: 151 HSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKV 210
HS Y FAS S + T + W R + H + +HP +LAT S DKT+++
Sbjct: 391 HSLY-FASASHDRTARLWSFDRTYPLRI-YAGHLADVDCVKFHPNSNYLATGSTDKTVRL 448
Query: 211 WDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTE 270
W S+ V + + P K+ LAS D + +WD+ +
Sbjct: 449 WSTQQGNSVRLFTGHRGPVLSLAFSPNGKY-LASAG--EDQRLKLWDLASGTL-YKELRG 504
Query: 271 HKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIK 303
H D ++ L + D L +AS+ + R +I+
Sbjct: 505 HTDNITSLTFSPDSSL-VASASMDNSVRVWDIR 536
Score = 174 (66.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 49/181 (27%), Positives = 87/181 (48%)
Query: 79 WNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHS 138
W+LG + + ++ H V + S + S S D T RL+ +I+
Sbjct: 365 WDLGSFTNTV---LYQGHAYPVWDLDIS-PHSLYFASASHDRTARLWSFDRTYPLRIYAG 420
Query: 139 NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAW 198
+ V V+F+P+S Y A+ S + T++ W ++ FT H GP+ + + P +
Sbjct: 421 HLADVDCVKFHPNSNY-LATGSTDKTVRLWSTQQGNSVRL-FTGHRGPVLSLAFSPNGKY 478
Query: 199 LATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
LA+A D+ +K+WDL+ + +++ + + P +AS S+ D+SV VWDI
Sbjct: 479 LASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSL-VASASM--DNSVRVWDI 535
Query: 259 R 259
R
Sbjct: 536 R 536
Score = 126 (49.4 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 29/107 (27%), Positives = 56/107 (52%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
N++ATG+T+ V +W+ Q R+F H+ V ++F +L S +D ++L
Sbjct: 435 NYLATGSTDKTVRLWSTQQ---GNSVRLFTGHRGPVLSLAFS-PNGKYLASAGEDQRLKL 490
Query: 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR 171
+D+ K +T+++ + F+P S AS S + +++ WD+R
Sbjct: 491 WDLASGTLYKELRGHTDNITSLTFSPDSSLV-ASASMDNSVRVWDIR 536
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 179 (68.1 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 62/268 (23%), Positives = 123/268 (45%)
Query: 34 TEFVETHNLRVG-KNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNL-GQISRSKQER 91
T+ V H +R G ++ N + W+ + +ATG+ +G +W G ++ +
Sbjct: 220 TQLVLRHCIREGGHDVPSNKDVTSLDWNS-DGTLLATGSYDGFARIWTEDGNLAST---- 274
Query: 92 VFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPH 151
HK + + ++ + N+++S D T ++D E+ + F ++ DV++ +
Sbjct: 275 -LGQHKGPIFALKWNK-KGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN 332
Query: 152 SPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVW 211
+ +A S + + RP K F H+ + A W P LA+ S D T+K+W
Sbjct: 333 TTFASCSTDMCIHVCRLGCDRPVKTFQ---GHTNEVNAIKWDPSGMLLASCSDDMTLKIW 389
Query: 212 DLSIKPSLEYSINTIAS-VSRIKW--------RPQRKFHLASCSLVVDSSVNVWDIRRPY 262
+ + + + + + + IKW P LAS S DS+V +WD+ R
Sbjct: 390 SMK-QDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASF--DSTVRLWDVERG- 445
Query: 263 IPLASFTEHKDVVSGLAWRGDPQLFIAS 290
+ + + T+H++ V +A+ D + ++AS
Sbjct: 446 VCIHTLTKHQEPVYSVAFSPDGK-YLAS 472
Score = 162 (62.1 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 52/214 (24%), Positives = 97/214 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV W A+ +T+ + V LG + + F H VN + + S L++
Sbjct: 326 DVDWQ--NNTTFASCSTDMCIHVCRLGC---DRPVKTFQGHTNEVNAIKWD--PSGMLLA 378
Query: 116 G-SQDGTMRLFDIRCQESTKIFHSNTESVRDVEF--------NPHSPYAFASVSENGTIQ 166
S D T++++ ++ ++++ + +++ NP+S AS S + T++
Sbjct: 379 SCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVR 438
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTI 226
WDV R C + T H P+++ + P+ +LA+ S DK + +W+ SL +S
Sbjct: 439 LWDVERGV-CIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQ-SGSLVHSYRGT 496
Query: 227 ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
+ + W + AS S D SV V D+R+
Sbjct: 497 GGIFEVCWNARGDKVGASAS---DGSVCVLDLRK 527
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 55/215 (25%), Positives = 91/215 (42%)
Query: 58 AWSCIEENHIATGATNGAVVVWNLGQISRSKQERVF-------NDHKRTVNK--VSFHYV 108
AW+ + + +A+G+ + +WNL + S ++ H NK S +
Sbjct: 189 AWNPVSDL-LASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWN 247
Query: 109 ESNWLIS-GSQDGTMRLF-DIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQ 166
L++ GS DG R++ + ST H + +++N Y ++ + TI
Sbjct: 248 SDGTLLATGSYDGFARIWTEDGNLASTLGQHKGP--IFALKWNKKGNYILSAGVDKTTII 305
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINT 225
WD E QF HS P DW + A+ S D I V L +P + +T
Sbjct: 306 -WDAHTGE-AKQQFPFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHT 362
Query: 226 IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
V+ IKW P LASCS D ++ +W +++
Sbjct: 363 -NEVNAIKWDPSGML-LASCS--DDMTLKIWSMKQ 393
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 179 (68.1 bits), Expect = 5.9e-11, P = 5.9e-11
Identities = 62/268 (23%), Positives = 123/268 (45%)
Query: 34 TEFVETHNLRVG-KNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNL-GQISRSKQER 91
T+ V H +R G ++ N + W+ + +ATG+ +G +W G ++ +
Sbjct: 220 TQLVLRHCIREGGHDVPSNKDVTSLDWNS-DGTLLATGSYDGFARIWTEDGNLAST---- 274
Query: 92 VFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPH 151
HK + + ++ + N+++S D T ++D E+ + F ++ DV++ +
Sbjct: 275 -LGQHKGPIFALKWNK-KGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN 332
Query: 152 SPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVW 211
+ +A S + + RP K F H+ + A W P LA+ S D T+K+W
Sbjct: 333 TTFASCSTDMCIHVCRLGCDRPVKTFQ---GHTNEVNAIKWDPSGMLLASCSDDMTLKIW 389
Query: 212 DLSIKPSLEYSINTIAS-VSRIKW--------RPQRKFHLASCSLVVDSSVNVWDIRRPY 262
+ + + + + + + IKW P LAS S DS+V +WD+ R
Sbjct: 390 SMK-QDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASF--DSTVRLWDVERG- 445
Query: 263 IPLASFTEHKDVVSGLAWRGDPQLFIAS 290
+ + + T+H++ V +A+ D + ++AS
Sbjct: 446 VCIHTLTKHQEPVYSVAFSPDGK-YLAS 472
Score = 162 (62.1 bits), Expect = 5.1e-09, P = 5.1e-09
Identities = 52/214 (24%), Positives = 97/214 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV W A+ +T+ + V LG + + F H VN + + S L++
Sbjct: 326 DVDWQ--NNTTFASCSTDMCIHVCRLGC---DRPVKTFQGHTNEVNAIKWD--PSGMLLA 378
Query: 116 G-SQDGTMRLFDIRCQESTKIFHSNTESVRDVEF--------NPHSPYAFASVSENGTIQ 166
S D T++++ ++ ++++ + +++ NP+S AS S + T++
Sbjct: 379 SCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVR 438
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTI 226
WDV R C + T H P+++ + P+ +LA+ S DK + +W+ SL +S
Sbjct: 439 LWDVERGV-CIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQ-SGSLVHSYRGT 496
Query: 227 ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
+ + W + AS S D SV V D+R+
Sbjct: 497 GGIFEVCWNARGDKVGASAS---DGSVCVLDLRK 527
Score = 121 (47.7 bits), Expect = 0.00020, P = 0.00020
Identities = 55/215 (25%), Positives = 91/215 (42%)
Query: 58 AWSCIEENHIATGATNGAVVVWNLGQISRSKQERVF-------NDHKRTVNK--VSFHYV 108
AW+ + + +A+G+ + +WNL + S ++ H NK S +
Sbjct: 189 AWNPVSDL-LASGSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWN 247
Query: 109 ESNWLIS-GSQDGTMRLF-DIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQ 166
L++ GS DG R++ + ST H + +++N Y ++ + TI
Sbjct: 248 SDGTLLATGSYDGFARIWTEDGNLASTLGQHKGP--IFALKWNKKGNYILSAGVDKTTII 305
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINT 225
WD E QF HS P DW + A+ S D I V L +P + +T
Sbjct: 306 -WDAHTGE-AKQQFPFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHT 362
Query: 226 IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
V+ IKW P LASCS D ++ +W +++
Sbjct: 363 -NEVNAIKWDPSGML-LASCS--DDMTLKIWSMKQ 393
>TAIR|locus:2122133 [details] [associations]
symbol:AT4G35370 "AT4G35370" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K14791 IPI:IPI00522472
RefSeq:NP_195263.4 UniGene:At.54614 ProteinModelPortal:F4JN04
SMR:F4JN04 PRIDE:F4JN04 EnsemblPlants:AT4G35370.1 GeneID:829690
KEGG:ath:AT4G35370 OMA:FRNIVAS Uniprot:F4JN04
Length = 433
Score = 177 (67.4 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 46/162 (28%), Positives = 88/162 (54%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
D+AW+ N +A+G+ + V VW+ ++ K + H++ V+ V+++ L+S
Sbjct: 221 DLAWNKEFRNIVASGSEDKKVKVWD---VATGKCKVTMEHHEKKVHAVAWNNYTPEVLLS 277
Query: 116 GSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEK 175
GS+D T+ L D R ++ + S V + ++PHS ++F ++GT++ +D R +
Sbjct: 278 GSRDRTVVLKDGRDPSNSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDL 337
Query: 176 C-FYQFTAHSGPIFACDWHPEHA--WLATASRDKTIKVWDLS 214
+ AH + + ++ HA LAT S D+++K+WDLS
Sbjct: 338 SPSFIIHAHDSEVSSISYNI-HAPNLLATGSADESVKLWDLS 378
Score = 128 (50.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 54/248 (21%), Positives = 108/248 (43%)
Query: 24 NVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAW-SCI-----EENHIATGATNGAVV 77
N ++++ +++E + N + + L C AW C + N +A G ++
Sbjct: 139 NYLEVYVYEESENIYLRNDMIISELPL---CT--AWLDCPLKGGGKGNFVAIGTMESSIE 193
Query: 78 VWNLGQISRSKQ---ERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTK 134
+W+L + N H V ++++ N + SGS+D ++++D+ +
Sbjct: 194 IWDLDLVCTCATLCTTGTDNSHTGPVIDLAWNKEFRNIVASGSEDKKVKVWDVATGKCKV 253
Query: 135 IFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSG-PIFACDWH 193
+ + V V +N ++P S S + T+ D R P +++ + A D H
Sbjct: 254 TMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVLKDGRDPSNSGLKWSTEAKVEKLAWDPH 313
Query: 194 PEHAWLATASRDKTIKVWDL---SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVD 250
EH+++ + +D T+K +D + PS + + VS I + LA+ S D
Sbjct: 314 SEHSFVVSL-KDGTVKGFDTRASDLSPSFIIHAHD-SEVSSISYNIHAPNLLATGS--AD 369
Query: 251 SSVNVWDI 258
SV +WD+
Sbjct: 370 ESVKLWDL 377
>WB|WBGene00007972 [details] [associations]
symbol:prp-4 species:6239 "Caenorhabditis elegans"
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0009790 "embryo development" evidence=IMP] [GO:0001703
"gastrulation with mouth forming first" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 EMBL:Z80215
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0016477
GO:GO:0008406 GO:GO:0002119 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR027106 PANTHER:PTHR19846
GO:GO:0001703 InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615
KO:K12662 GeneTree:ENSGT00690000101787 OMA:CKIWDLR PIR:T19776
RefSeq:NP_492363.1 HSSP:O43172 ProteinModelPortal:Q93339 SMR:Q93339
DIP:DIP-26822N IntAct:Q93339 MINT:MINT-1102466 STRING:Q93339
PaxDb:Q93339 EnsemblMetazoa:C36B1.5.1 EnsemblMetazoa:C36B1.5.2
GeneID:183250 KEGG:cel:CELE_C36B1.5 UCSC:C36B1.5.1 CTD:183250
WormBase:C36B1.5 InParanoid:Q93339 NextBio:920460 Uniprot:Q93339
Length = 496
Score = 178 (67.7 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 53/208 (25%), Positives = 100/208 (48%)
Query: 66 HIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLF 125
++ + + +G V++W+L Q S + H + V+KV+FH + L + D T R++
Sbjct: 268 NVVSCSYDGTVLLWSLSQESPIGE---LEQHPQRVSKVAFH-PNGHHLATACFDSTWRMY 323
Query: 126 DIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSE-NGTIQQWDVRRPEKCFYQFTAHS 184
D+ ++ +++SV DV F+P A + G + WD+R +C H+
Sbjct: 324 DLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRV--WDMRTG-RCIMFLDGHT 380
Query: 185 GPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASV-SRIKWRPQRKFHLA 243
I + +W P + T S D ++KVWDL ++ + Y++ SV +R++ ++ L
Sbjct: 381 KEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNT-YTMPAHTSVVTRVRADAAGQY-LV 438
Query: 244 SCSLVVDSSVNVWDIRRPYIPLASFTEH 271
S S D ++ +W + PL H
Sbjct: 439 SASF--DCTLKMWSTTG-WQPLRQLQGH 463
Score = 160 (61.4 bits), Expect = 7.7e-09, P = 7.7e-09
Identities = 47/204 (23%), Positives = 89/204 (43%)
Query: 63 EENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFH---YVESNW----LIS 115
+ HI T +G+V VW Q + QE F H FH + ++++ ++S
Sbjct: 215 DSEHIVTAGWSGSVAVWKREQCA---QEIKFIGHSSQAGCARFHPGAFTQNDYSSLNVVS 271
Query: 116 GSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEK 175
S DGT+ L+ + + + + V V F+P+ + A+ + T + +D+ ++
Sbjct: 272 CSYDGTVLLWSLSQESPIGELEQHPQRVSKVAFHPNGHH-LATACFDSTWRMYDLTTKKE 330
Query: 176 CFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWR 235
YQ HS + +HP+ + T D +VWD+ + + + ++W
Sbjct: 331 LLYQ-EGHSKSVADVAFHPDGSVALTGGHDCYGRVWDMRTGRCIMFLDGHTKEIHSVEWM 389
Query: 236 PQRKFHLASCSLVVDSSVNVWDIR 259
P + S D+S+ VWD+R
Sbjct: 390 PNGYEMITGSS---DNSMKVWDLR 410
Score = 121 (47.7 bits), Expect = 0.00018, P = 0.00018
Identities = 40/162 (24%), Positives = 79/162 (48%)
Query: 53 SCNDVAWSCIEENHIA-TGATNGAVVVWNLGQISRSKQERVFND-HKRTVNKVSFHYVES 110
S DVA+ + +A TG + VW++ R+ + +F D H + ++ V ++ +
Sbjct: 340 SVADVAFH--PDGSVALTGGHDCYGRVWDM----RTGRCIMFLDGHTKEIHSVE--WMPN 391
Query: 111 NW-LISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
+ +I+GS D +M+++D+R + +T ++T V V + Y S S + T++ W
Sbjct: 392 GYEMITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAGQY-LVSASFDCTLKMWS 450
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVW 211
+ Q H I D P+ W+ +++ D+T K+W
Sbjct: 451 TTGWQP-LRQLQGHDTRILCVDISPDGQWMCSSAFDRTFKLW 491
>POMBASE|SPBP22H7.07 [details] [associations]
symbol:prp5 "WD repeat protein Prp5" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=IDA] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBP22H7.07
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0007049 EMBL:AB004535 GO:GO:0045292 HOGENOM:HOG000207595
KO:K12862 OMA:HKKTVRA OrthoDB:EOG4QZBVP EMBL:AF251148
RefSeq:NP_595604.1 ProteinModelPortal:O13615 IntAct:O13615
STRING:O13615 EnsemblFungi:SPBP22H7.07.1 GeneID:3361260
KEGG:spo:SPBP22H7.07 NextBio:20811358 Uniprot:O13615
Length = 473
Score = 177 (67.4 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 54/208 (25%), Positives = 95/208 (45%)
Query: 91 RVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNP 150
RV + H V V + W +G+ D T++++D+ + +VR + +P
Sbjct: 157 RVISGHLGWVRCVDVE-PGNQWFCTGAGDRTIKIWDLASGVLKLTLTGHIATVRGLAVSP 215
Query: 151 HSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKV 210
PY F S E+ ++ WD+ K + H ++A HP L TA RD +V
Sbjct: 216 RHPYLF-SCGEDKMVKCWDLET-NKVIRHYHGHLSGVYALKLHPTLDVLVTAGRDAVARV 273
Query: 211 WDLSIKPS---LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLAS 267
WD+ + + L +T+AS++ ++ PQ + + S+ DS++ +WD+ L +
Sbjct: 274 WDMRTRQNVHVLSGHKSTVASLAVQEFDPQ----VVTGSM--DSTIRLWDLAAGKT-LTT 326
Query: 268 FTEHKDVVSGLAWRGDPQLFIASSRVSI 295
T HK V L+ D F + S +I
Sbjct: 327 LTHHKKTVRALSLHPDEFTFASGSSDNI 354
>UNIPROTKB|E1C8E9 [details] [associations]
symbol:TAF5L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA] [GO:0030914 "STAGA complex" evidence=IEA] [GO:0033276
"transcription factor TFTC complex" evidence=IEA] [GO:0043966
"histone H3 acetylation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR007582 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0003713 GO:GO:0043966 GO:GO:0004402
GO:GO:0030914 GO:GO:0033276 GeneTree:ENSGT00700000104377
OMA:YVDSEGP EMBL:AADN02035649 EMBL:AADN02035650 IPI:IPI00584483
ProteinModelPortal:E1C8E9 Ensembl:ENSGALT00000018081 Uniprot:E1C8E9
Length = 560
Score = 178 (67.7 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 46/153 (30%), Positives = 77/153 (50%)
Query: 110 SNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
S + S S D T RL+ +I+ + V V+F+P+S Y A+ S + T++ W
Sbjct: 396 SLYFASASHDRTARLWSFDRTYPLRIYAGHLLDVDCVKFHPNSNY-LATGSTDKTVRLWS 454
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASV 229
++ FT H GP+ A + P +LA+A D+ +K+WDL+ + ++
Sbjct: 455 TQQGNSVRL-FTGHRGPVLALAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNI 513
Query: 230 SRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY 262
+ + + P +AS S+ D+SV VWDIR Y
Sbjct: 514 TSLTFSPDSSL-IASASM--DNSVRVWDIRNTY 543
Score = 175 (66.7 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 58/222 (26%), Positives = 101/222 (45%)
Query: 85 SRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVR 144
S + ++ H V F +S+ L+S S+D ++R +D+R +T ++ + V
Sbjct: 330 SAGTEMKILRGHCGPVYSTRF-LSDSSGLLSCSEDMSIRYWDLRSFTNTVLYQGHAYPVW 388
Query: 145 DVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACD---WHPEHAWLAT 201
D++ +P S Y FAS S + T + W R Y ++G + D +HP +LAT
Sbjct: 389 DLDISPCSLY-FASASHDRTARLWSFDRT----YPLRIYAGHLLDVDCVKFHPNSNYLAT 443
Query: 202 ASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRP 261
S DKT+++W S+ V + + P K+ LAS D + +WD+
Sbjct: 444 GSTDKTVRLWSTQQGNSVRLFTGHRGPVLALAFSPNGKY-LASAG--EDQRLKLWDLASG 500
Query: 262 YIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIK 303
+ H D ++ L + D L IAS+ + R +I+
Sbjct: 501 TL-YKELRGHTDNITSLTFSPDSSL-IASASMDNSVRVWDIR 540
Score = 128 (50.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 36/136 (26%), Positives = 67/136 (49%)
Query: 36 FVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFND 95
F T+ LR+ L+ C V + N++ATG+T+ V +W+ Q R+F
Sbjct: 413 FDRTYPLRIYAGHLLDVDC--VKFHP-NSNYLATGSTDKTVRLWSTQQ---GNSVRLFTG 466
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYA 155
H+ V ++F +L S +D ++L+D+ K +T+++ + F+P S
Sbjct: 467 HRGPVLALAFS-PNGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSPDSSL- 524
Query: 156 FASVSENGTIQQWDVR 171
AS S + +++ WD+R
Sbjct: 525 IASASMDNSVRVWDIR 540
>CGD|CAL0005039 [details] [associations]
symbol:orf19.3467 species:5476 "Candida albicans" [GO:0030126
"COPI vesicle coat" evidence=IEA] [GO:0032511 "late endosome to
vacuole transport via multivesicular body sorting pathway"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006692 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 CGD:CAL0005039
GO:GO:0006886 GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 EMBL:AACQ01000155
EMBL:AACQ01000154 InterPro:IPR016453 PIRSF:PIRSF005567
RefSeq:XP_712507.1 RefSeq:XP_712537.1 ProteinModelPortal:Q59S73
STRING:Q59S73 GeneID:3645845 GeneID:3645870 KEGG:cal:CaO19.10971
KEGG:cal:CaO19.3467 Uniprot:Q59S73
Length = 939
Score = 181 (68.8 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 66/271 (24%), Positives = 120/271 (44%)
Query: 64 ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMR 123
E I T NG + +W+ S K +V + V F NW++ GS D +R
Sbjct: 25 EPWILTTLYNGKIEIWSYATNSLVKSIQVT---ELPVRAGKF-IARKNWIVVGSDDFQIR 80
Query: 124 LFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAH 183
+++ E F ++ + +R + +P PY S S++ TI+ W+ K F H
Sbjct: 81 VYNYNTGEKVTQFEAHPDYIRSIAVHPSKPYILTS-SDDLTIKLWNWDHNWKLEQTFEGH 139
Query: 184 SGPIFACDWHPEHA-WLATASRDKTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQR-KF 240
+ + +++P+ A+A D+T+K+W L S +P+ + V+ + + PQ K
Sbjct: 140 QHYVMSVNFNPKDPNTFASACLDRTVKIWSLGSSQPNFTLIAHEAKGVNYVDYYPQADKP 199
Query: 241 HLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAK 300
+L + S D ++ VWD + +A+ H VS + + + ++ S I R
Sbjct: 200 YLITSS--DDKTIKVWDYQTKSC-VATLEGHLSNVSFAIFHPELPIIVSGSEDGTI-RFW 255
Query: 301 NIKIFIASSRVSI-IPRAENIKIFITSSRVL 330
N F ++ + RA I I + S V+
Sbjct: 256 NSNTFKLEKSINYSLERAWCIGI-LPKSNVI 285
>DICTYBASE|DDB_G0278285 [details] [associations]
symbol:copB2 "coatomer protein complex beta 2 subunit
(beta prime)" species:44689 "Dictyostelium discoideum" [GO:0030117
"membrane coat" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=ISS]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0278285 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
GenomeReviews:CM000152_GR GO:GO:0005198 EMBL:AAFI02000023
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0030126
HSSP:P63005 InterPro:IPR016453 PIRSF:PIRSF005567 OMA:LRNKAFG
RefSeq:XP_642264.1 ProteinModelPortal:Q54YD8 STRING:Q54YD8
EnsemblProtists:DDB0233798 GeneID:8621473 KEGG:ddi:DDB_G0278285
ProtClustDB:CLSZ2729111 Uniprot:Q54YD8
Length = 1005
Score = 181 (68.8 bits), Expect = 9.3e-11, P = 9.3e-11
Identities = 59/233 (25%), Positives = 106/233 (45%)
Query: 64 ENHIATGATNGAVVVWNLGQISRSKQERVF-NDHKRTVNKVSFHYVESNWLISGSQDGTM 122
E I +G V +WN + K V N+ RT ++ + W+++GS D +
Sbjct: 27 EPWILASLYDGNVYIWNYETQNMVKSFEVSPNNPVRTARFIA----KKQWIVTGSDDTYI 82
Query: 123 RLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA 182
R+++ E K F ++ + +R + +P PY +S S++ I+ WD + F
Sbjct: 83 RVYNYNTMEKIKSFEAHADYIRCIIVHPTLPYILSS-SDDMFIKLWDYEKGWSNTQVFEG 141
Query: 183 HSGPIFACDWHPEHA-WLATASRDKTIKVWDL-SIKP--SLEYSINTIASVSRIKWRPQR 238
HS + + W+P+ ATAS DKT+KVW + S P +LE I SV ++
Sbjct: 142 HSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHPHFTLEGHEKGINSVEYFSGG-EK 200
Query: 239 KFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+ ++ D V +WD + + + H + VS + + + L ++ S
Sbjct: 201 PYLISGAD---DKLVKIWDYQSKTC-VQTLEGHSNNVSVVCYHPELPLILSGS 249
Score = 124 (48.7 bits), Expect = 0.00022, P = 0.00022
Identities = 30/148 (20%), Positives = 67/148 (45%)
Query: 91 RVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEF-- 148
+VF H V ++++ ++N + S D T++++ I + + + VE+
Sbjct: 137 QVFEGHSHYVMSIAWNPKDTNQFATASLDKTVKVWSINSPHPHFTLEGHEKGINSVEYFS 196
Query: 149 NPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTI 208
PY + + ++ WD + + C HS + +HPE + + S D T+
Sbjct: 197 GGEKPYLISGADDK-LVKIWDYQS-KTCVQTLEGHSNNVSVVCYHPELPLILSGSEDGTV 254
Query: 209 KVWDLS---IKPSLEYSINTIASVSRIK 233
K+W S ++ +L Y + + S++ ++
Sbjct: 255 KLWHSSTYRLERTLNYGMGFVWSMNFLR 282
Score = 122 (48.0 bits), Expect = 0.00036, P = 0.00036
Identities = 29/113 (25%), Positives = 57/113 (50%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVS-FHYVESNWLIS 115
+AW+ + N AT + + V VW+ I+ H++ +N V F E +LIS
Sbjct: 149 IAWNPKDTNQFATASLDKTVKVWS---INSPHPHFTLEGHEKGINSVEYFSGGEKPYLIS 205
Query: 116 GSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQW 168
G+ D ++++D + + + ++ +V V ++P P + SE+GT++ W
Sbjct: 206 GADDKLVKIWDYQSKTCVQTLEGHSNNVSVVCYHPELPLILSG-SEDGTVKLW 257
>FB|FBgn0263933 [details] [associations]
symbol:ebi "ebi" species:7227 "Drosophila melanogaster"
[GO:0042058 "regulation of epidermal growth factor receptor
signaling pathway" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005525 "GTP binding" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0051726 "regulation of cell
cycle" evidence=IMP] [GO:0007173 "epidermal growth factor receptor
signaling pathway" evidence=TAS] [GO:0030162 "regulation of
proteolysis" evidence=TAS] [GO:0042676 "compound eye cone cell fate
commitment" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0017053 "transcriptional repressor complex"
evidence=IGI;IPI] [GO:0042461 "photoreceptor cell development"
evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0031065 "positive regulation of histone deacetylation"
evidence=IDA] [GO:0070491 "repressing transcription factor binding"
evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IPI] [GO:0035220 "wing disc
development" evidence=IGI;IMP] [GO:0045747 "positive regulation of
Notch signaling pathway" evidence=IGI;IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0045572 "positive regulation of
imaginal disc growth" evidence=IGI;IMP] [GO:0022416 "chaeta
development" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005525 GO:GO:0017053 GO:GO:0007173 EMBL:AE014134
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0007601 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0030162 GO:GO:0007219 GO:GO:0045747
GO:GO:0003682 GO:GO:0000122 GO:GO:0022416 GO:GO:0035220
GO:GO:0007049 InterPro:IPR013720 Pfam:PF08513 GO:GO:0045572
GO:GO:0005700 GO:GO:0042461 GO:GO:0042058 GO:GO:0031065
GO:GO:0042676 EMBL:AF146345 EMBL:AY061326 RefSeq:NP_477329.1
UniGene:Dm.3639 ProteinModelPortal:Q95RJ9 SMR:Q95RJ9 IntAct:Q95RJ9
MINT:MINT-6540401 STRING:Q95RJ9 PaxDb:Q95RJ9
EnsemblMetazoa:FBtr0078055 GeneID:33212 KEGG:dme:Dmel_CG4063
CTD:33212 FlyBase:FBgn0263933 GeneTree:ENSGT00690000102024
InParanoid:Q95RJ9 KO:K04508 OMA:NRDRCCH OrthoDB:EOG4SF7NC
PhylomeDB:Q95RJ9 GenomeRNAi:33212 NextBio:782461 Bgee:Q95RJ9
GermOnline:CG4063 Uniprot:Q95RJ9
Length = 700
Score = 179 (68.1 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 55/247 (22%), Positives = 111/247 (44%)
Query: 45 GKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNL-GQISRSKQERVFNDHKRTVNKV 103
G + N + W+C + + +ATG+ +G +W G+++ + HK + +
Sbjct: 404 GAEVPSNKDVTSLDWNC-DGSLLATGSYDGYARIWKTDGRLAST-----LGQHKGPIFAL 457
Query: 104 SFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENG 163
++ N+++S D T ++D + T+ F ++ DV++ + +A S +
Sbjct: 458 KWNKC-GNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTDQRI 516
Query: 164 TIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI 223
+ + V P K F H+ + A W P+ LA+ S D T+K+W ++ + + +
Sbjct: 517 HVCRLGVNEPIKTF---KGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMN-RDRCCHDL 572
Query: 224 NTIAS-VSRIKWRP------QRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVS 276
+ + IKW P +L S DS+V +WD+ R + + T+H + V
Sbjct: 573 QAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSC-IHTLTKHTEPVY 631
Query: 277 GLAWRGD 283
+A+ D
Sbjct: 632 SVAFSPD 638
Score = 152 (58.6 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 50/213 (23%), Positives = 94/213 (44%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV W + A+ +T+ + V LG ++ + F H VN + + + L S
Sbjct: 498 DVDWQTNQA--FASCSTDQRIHVCRLGV---NEPIKTFKGHTNEVNAIKW-CPQGQLLAS 551
Query: 116 GSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSP--------YAFASVSENGTIQQ 167
S D T++++ + ++++ + ++++P P AS S + T++
Sbjct: 552 CSDDMTLKIWSMNRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRL 611
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA 227
WDV R C + T H+ P+++ + P+ LA+ S DK + +W L +S
Sbjct: 612 WDVERGS-CIHTLTKHTEPVYSVAFSPDGKHLASGSFDKCVHIWSTQTG-QLVHSYKGTG 669
Query: 228 SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
+ + W + AS S D SV V D+R+
Sbjct: 670 GIFEVCWNSKGTKVGASAS---DGSVFVLDLRK 699
Score = 120 (47.3 bits), Expect = 0.00038, P = 0.00038
Identities = 55/224 (24%), Positives = 100/224 (44%)
Query: 83 QISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDI-------------RC 129
+I SK RV H+ V +++ + L SGS D T R++D+ C
Sbjct: 342 EIPESKA-RVLRGHESEVFICAWN-PSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHC 399
Query: 130 -QESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIF 188
Q+ SN + V +++N A+ S +G + W + + H GPIF
Sbjct: 400 IQKGGAEVPSNKD-VTSLDWNCDGSL-LATGSYDGYARIW--KTDGRLASTLGQHKGPIF 455
Query: 189 ACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTIASVSRIKWRPQRKFHLASCSL 247
A W+ ++ +A DKT +WD S + + +++ ++ ++ + W+ + F ASCS
Sbjct: 456 ALKWNKCGNYILSAGVDKTTIIWDASTGQCTQQFAFHSAPALD-VDWQTNQAF--ASCS- 511
Query: 248 VVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
D ++V + P+ +F H + V+ + W QL + S
Sbjct: 512 -TDQRIHVCRLGVNE-PIKTFKGHTNEVNAIKWCPQGQLLASCS 553
>FB|FBgn0010356 [details] [associations]
symbol:Taf5 "TBP-associated factor 5" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0005669 "transcription factor TFIID complex"
evidence=ISS;IDA;IPI] [GO:0001075 "RNA polymerase II core promoter
sequence-specific DNA binding transcription factor activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=ISS] [GO:0000124 "SAGA complex"
evidence=IPI] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 EMBL:AE013599
GO:GO:0022008 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0000124 GO:GO:0005669 GO:GO:0051123
GeneTree:ENSGT00700000104377 KO:K03130 EMBL:U06460 EMBL:AY051960
PIR:S33263 RefSeq:NP_476957.1 UniGene:Dm.19905
ProteinModelPortal:P49846 SMR:P49846 DIP:DIP-48906N STRING:P49846
PaxDb:P49846 PRIDE:P49846 EnsemblMetazoa:FBtr0088240 GeneID:47900
KEGG:dme:Dmel_CG7704 CTD:6877 FlyBase:FBgn0010356 InParanoid:P49846
OMA:ERQNNQI OrthoDB:EOG4F7M11 PhylomeDB:P49846 GenomeRNAi:47900
NextBio:839215 Bgee:P49846 GermOnline:CG7704 Uniprot:P49846
Length = 704
Score = 179 (68.1 bits), Expect = 9.5e-11, P = 9.5e-11
Identities = 54/209 (25%), Positives = 94/209 (44%)
Query: 82 GQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTE 141
G+++RS H V + +F E N L+S S+D T+RL+ + + +
Sbjct: 440 GEVTRSLM-----GHTGPVYRCAFA-PEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVY 493
Query: 142 SVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLAT 201
V DV F PH Y F S S + T + W + F H + +HP ++AT
Sbjct: 494 PVWDVRFAPHG-YYFVSCSYDKTARLW-ATDSNQALRVFVGHLSDVDCVQFHPNSNYVAT 551
Query: 202 ASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRP 261
S D+T+++WD S+ SVS + + ++ LAS S VD ++ +WD+
Sbjct: 552 GSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRY-LASGS--VDHNIIIWDLSNG 608
Query: 262 YIPLASFTEHKDVVSGLAWRGDPQLFIAS 290
+ + + H V+ + + D + A+
Sbjct: 609 SL-VTTLLRHTSTVTTITFSRDGTVLAAA 636
Score = 135 (52.6 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 55/214 (25%), Positives = 89/214 (41%)
Query: 117 SQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
S D +R+ D R E T+ +T V F P S SE+ TI+ W + C
Sbjct: 427 SADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLL-SCSEDSTIRLWSLLT-WSC 484
Query: 177 FYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRP 236
+ H P++ + P + + S DKT ++W +L + ++ V +++ P
Sbjct: 485 VVTYRGHVYPVWDVRFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHP 544
Query: 237 QRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSII 296
+ S D +V +WD + T HK VS LA+ + ++AS V
Sbjct: 545 NSNYVATGSS---DRTVRLWDNMTGQ-SVRLMTGHKGSVSSLAFSACGR-YLASGSVD-- 597
Query: 297 PRAKNIKIFIAS--SRVSIIPRAENIKIFITSSR 328
NI I+ S S V+ + R + IT SR
Sbjct: 598 ---HNIIIWDLSNGSLVTTLLRHTSTVTTITFSR 628
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 39/136 (28%), Positives = 61/136 (44%)
Query: 91 RVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNP 150
RVF H V+ V FH SN++ +GS D T+RL+D +S ++ + SV + F+
Sbjct: 528 RVFVGHLSDVDCVQFH-PNSNYVATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSA 586
Query: 151 HSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKV 210
Y AS S + I WD+ H+ + + + LA A D + +
Sbjct: 587 CGRY-LASGSVDHNIIIWDLSNGS-LVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTL 644
Query: 211 WDLSIKPSLEYSINTI 226
WD K + +Y N I
Sbjct: 645 WDFH-KVTEDYISNHI 659
>GENEDB_PFALCIPARUM|PFC0100c [details] [associations]
symbol:PFC0100c "regulatory protein, putative"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 178 (67.7 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 53/197 (26%), Positives = 88/197 (44%)
Query: 88 KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR-CQ-ESTKIFHSNTESVRD 145
K RV H VN V + + W +GS D ++++D+ C+ + T H N S+RD
Sbjct: 277 KLYRVILGHSGWVNCVDVD-ISNEWFATGSNDRLIKIWDLASCKLKLTLTGHIN--SIRD 333
Query: 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRD 205
++ + +PY F S E+ ++ WD+ K + H ++ HP L + RD
Sbjct: 334 IKISKKNPYLF-SCGEDNRVKCWDLEY-NKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRD 391
Query: 206 KTIKVWDLSIKPS---LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY 262
++VWD+ K S L T+ S+ PQ + S S D + +WD+
Sbjct: 392 AVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQ----VVSGSQ--DKMIRLWDLNNGK 445
Query: 263 IPLASFTEHKDVVSGLA 279
+ S T HK + L+
Sbjct: 446 CRI-SLTHHKKSIRSLS 461
Score = 136 (52.9 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 48/208 (23%), Positives = 92/208 (44%)
Query: 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNW 112
+C DV I ATG+ + + +W+L K + H ++ + ++ +
Sbjct: 290 NCVDVD---ISNEWFATGSNDRLIKIWDLASC---KLKLTLTGHINSIRDIKISK-KNPY 342
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR 172
L S +D ++ +D+ + + +H + V + +P S S + ++ WD+R
Sbjct: 343 LFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHP-SLDLLMSGGRDAVVRVWDIRT 401
Query: 173 PEKCFYQFTAHSGPIFA-CDWHPEHAWLATASRDKTIKVWDLS---IKPSLEYSINTIAS 228
F + H+G + + C E + + S+DK I++WDL+ + SL + +I S
Sbjct: 402 KSSVFV-LSGHTGTVMSICSQSVEPQ-VVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRS 459
Query: 229 VSRIKWRPQRKFHLASCSLVVDSSVNVW 256
+S P F + CS D+ V VW
Sbjct: 460 LSI---HP---FEYSFCSCGTDN-VKVW 480
Score = 118 (46.6 bits), Expect = 0.00052, P = 0.00052
Identities = 39/149 (26%), Positives = 65/149 (43%)
Query: 173 PEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLS---IKPSLEYSINTIASV 229
P K + HSG + D + W AT S D+ IK+WDL+ +K +L IN+I +
Sbjct: 275 PYKLYRVILGHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDI 334
Query: 230 SRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIA 289
K P +L SC D+ V WD+ + + + H V L+ L ++
Sbjct: 335 KISKKNP----YLFSCG--EDNRVKCWDLEYNKV-IRDYHGHLSGVYCLSLHPSLDLLMS 387
Query: 290 SSRVSIIP----RAKNIKIFIASSRVSII 314
R +++ R K+ +F+ S +
Sbjct: 388 GGRDAVVRVWDIRTKS-SVFVLSGHTGTV 415
>UNIPROTKB|O97334 [details] [associations]
symbol:PFC0100c "Regulatory protein, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
EMBL:AL844502 HOGENOM:HOG000207595 KO:K12862 RefSeq:XP_001351097.1
ProteinModelPortal:O97334 IntAct:O97334 MINT:MINT-1755911
EnsemblProtists:PFC0100c:mRNA GeneID:814338 KEGG:pfa:PFC0100c
EuPathDB:PlasmoDB:PF3D7_0302000 OMA:GHINSIR ProtClustDB:CLSZ2733686
Uniprot:O97334
Length = 600
Score = 178 (67.7 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 53/197 (26%), Positives = 88/197 (44%)
Query: 88 KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR-CQ-ESTKIFHSNTESVRD 145
K RV H VN V + + W +GS D ++++D+ C+ + T H N S+RD
Sbjct: 277 KLYRVILGHSGWVNCVDVD-ISNEWFATGSNDRLIKIWDLASCKLKLTLTGHIN--SIRD 333
Query: 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRD 205
++ + +PY F S E+ ++ WD+ K + H ++ HP L + RD
Sbjct: 334 IKISKKNPYLF-SCGEDNRVKCWDLEY-NKVIRDYHGHLSGVYCLSLHPSLDLLMSGGRD 391
Query: 206 KTIKVWDLSIKPS---LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPY 262
++VWD+ K S L T+ S+ PQ + S S D + +WD+
Sbjct: 392 AVVRVWDIRTKSSVFVLSGHTGTVMSICSQSVEPQ----VVSGSQ--DKMIRLWDLNNGK 445
Query: 263 IPLASFTEHKDVVSGLA 279
+ S T HK + L+
Sbjct: 446 CRI-SLTHHKKSIRSLS 461
Score = 136 (52.9 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 48/208 (23%), Positives = 92/208 (44%)
Query: 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNW 112
+C DV I ATG+ + + +W+L K + H ++ + ++ +
Sbjct: 290 NCVDVD---ISNEWFATGSNDRLIKIWDLASC---KLKLTLTGHINSIRDIKISK-KNPY 342
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR 172
L S +D ++ +D+ + + +H + V + +P S S + ++ WD+R
Sbjct: 343 LFSCGEDNRVKCWDLEYNKVIRDYHGHLSGVYCLSLHP-SLDLLMSGGRDAVVRVWDIRT 401
Query: 173 PEKCFYQFTAHSGPIFA-CDWHPEHAWLATASRDKTIKVWDLS---IKPSLEYSINTIAS 228
F + H+G + + C E + + S+DK I++WDL+ + SL + +I S
Sbjct: 402 KSSVFV-LSGHTGTVMSICSQSVEPQ-VVSGSQDKMIRLWDLNNGKCRISLTHHKKSIRS 459
Query: 229 VSRIKWRPQRKFHLASCSLVVDSSVNVW 256
+S P F + CS D+ V VW
Sbjct: 460 LSI---HP---FEYSFCSCGTDN-VKVW 480
Score = 118 (46.6 bits), Expect = 0.00052, P = 0.00052
Identities = 39/149 (26%), Positives = 65/149 (43%)
Query: 173 PEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLS---IKPSLEYSINTIASV 229
P K + HSG + D + W AT S D+ IK+WDL+ +K +L IN+I +
Sbjct: 275 PYKLYRVILGHSGWVNCVDVDISNEWFATGSNDRLIKIWDLASCKLKLTLTGHINSIRDI 334
Query: 230 SRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIA 289
K P +L SC D+ V WD+ + + + H V L+ L ++
Sbjct: 335 KISKKNP----YLFSCG--EDNRVKCWDLEYNKV-IRDYHGHLSGVYCLSLHPSLDLLMS 387
Query: 290 SSRVSIIP----RAKNIKIFIASSRVSII 314
R +++ R K+ +F+ S +
Sbjct: 388 GGRDAVVRVWDIRTKS-SVFVLSGHTGTV 415
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 177 (67.4 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 62/268 (23%), Positives = 123/268 (45%)
Query: 34 TEFVETHNLRVG-KNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNL-GQISRSKQER 91
T+ V H +R G ++ N + W+ + +ATG+ +G +W G ++ +
Sbjct: 216 TQLVLRHCIREGGHDVPSNKDVTSLDWNS-DGTLLATGSYDGFARIWTEDGNLAST---- 270
Query: 92 VFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPH 151
HK + + ++ + N+++S D T ++D E+ + F ++ DV++ +
Sbjct: 271 -LGQHKGPIFALKWNK-KGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN 328
Query: 152 SPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVW 211
+ +A S + + RP K F H+ + A W P LA+ S D T+K+W
Sbjct: 329 TTFASCSTDMCIHVCRLGCDRPVKTFQ---GHTNEVNAIKWDPSGMLLASCSDDMTLKIW 385
Query: 212 DLSIKPSLEYSINTIAS-VSRIKW--------RPQRKFHLASCSLVVDSSVNVWDIRRPY 262
+ + + + + + + IKW P LAS S DS+V +WD+ R
Sbjct: 386 SMK-QDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASF--DSTVRLWDVDRG- 441
Query: 263 IPLASFTEHKDVVSGLAWRGDPQLFIAS 290
+ + + T+H++ V +A+ D + ++AS
Sbjct: 442 VCIHTLTKHQEPVYSVAFSPDGK-YLAS 468
Score = 157 (60.3 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 51/214 (23%), Positives = 97/214 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV W A+ +T+ + V LG + + F H VN + + S L++
Sbjct: 322 DVDWQ--NNTTFASCSTDMCIHVCRLGC---DRPVKTFQGHTNEVNAIKWD--PSGMLLA 374
Query: 116 G-SQDGTMRLFDIRCQESTKIFHSNTESVRDVEF--------NPHSPYAFASVSENGTIQ 166
S D T++++ ++ ++++ + +++ NP+S AS S + T++
Sbjct: 375 SCSDDMTLKIWSMKQDTCVHDLQAHSKEIYTIKWSPTGPGTSNPNSNIMLASASFDSTVR 434
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTI 226
WDV R C + T H P+++ + P+ +LA+ S DK + +W+ +L +S
Sbjct: 435 LWDVDRGV-CIHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQ-SGTLVHSYRGT 492
Query: 227 ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
+ + W + AS S D SV V D+R+
Sbjct: 493 GGIFEVCWNARGDKVGASAS---DGSVCVLDLRK 523
Score = 125 (49.1 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 56/215 (26%), Positives = 92/215 (42%)
Query: 58 AWSCIEENHIATGATNGAVVVWNLGQISRSKQERVF-------NDHKRTVNK--VSFHYV 108
AW+ + + +A+G+ + +WNL + S S ++ H NK S +
Sbjct: 185 AWNPVSDL-LASGSGDSTARIWNLNENSNSGSTQLVLRHCIREGGHDVPSNKDVTSLDWN 243
Query: 109 ESNWLIS-GSQDGTMRLF-DIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQ 166
L++ GS DG R++ + ST H + +++N Y ++ + TI
Sbjct: 244 SDGTLLATGSYDGFARIWTEDGNLASTLGQHKGP--IFALKWNKKGNYILSAGVDKTTII 301
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINT 225
WD E QF HS P DW + A+ S D I V L +P + +T
Sbjct: 302 -WDAHTGE-AKQQFPFHSAPALDVDWQ-NNTTFASCSTDMCIHVCRLGCDRPVKTFQGHT 358
Query: 226 IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
V+ IKW P LASCS D ++ +W +++
Sbjct: 359 -NEVNAIKWDPSGML-LASCS--DDMTLKIWSMKQ 389
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 155 (59.6 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 43/160 (26%), Positives = 73/160 (45%)
Query: 117 SQDGTMRLFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRP 173
+ D + ++D R ++K HS +T V + FNP+S + A+ S + T+ WD+R
Sbjct: 2 ADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 61
Query: 174 EKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSI-------------KPSL 219
+ + F +H IF W P + LA++ D+ + VWDLS P L
Sbjct: 62 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 121
Query: 220 EYSINT-IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
+ A +S W P + + CS+ D+ + VW +
Sbjct: 122 LFIHGGHTAKISDFSWNPNEPWVI--CSVSEDNIMQVWQM 159
Score = 136 (52.9 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 36/159 (22%), Positives = 71/159 (44%)
Query: 71 ATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR-C 129
A + +++W+ + SK + H VN +SF+ L +GS D T+ L+D+R
Sbjct: 2 ADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL 61
Query: 130 QESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-------------PEKC 176
+ F S+ + + V+++PH+ AS + + WD+ + P +
Sbjct: 62 KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPEL 121
Query: 177 FYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
+ H+ I W+P W + + S D ++VW ++
Sbjct: 122 LFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 160
Score = 119 (46.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 30/106 (28%), Positives = 53/106 (50%)
Query: 159 VSENGTIQQWDVR--RPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDL-S 214
V+++ + WD R K + AH+ + ++P + LAT S DKT+ +WDL +
Sbjct: 1 VADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 60
Query: 215 IKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
+K L + + +++W P + LAS D +NVWD+ +
Sbjct: 61 LKLKLHSFESHKDEIFQVQWSPHNETILASSG--TDRRLNVWDLSK 104
Score = 112 (44.5 bits), Expect = 0.00015, P = 0.00015
Identities = 29/91 (31%), Positives = 47/91 (51%)
Query: 205 DKTIKVWDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
D+ + +WD + KPS +T A V+ + + P +F LA+ S D +V +WD+R
Sbjct: 4 DQKLMIWDTRSNNTSKPSHSVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVALWDLRN 60
Query: 261 PYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+ L SF HKD + + W + +ASS
Sbjct: 61 LKLKLHSFESHKDEIFQVQWSPHNETILASS 91
>UNIPROTKB|G3V4I9 [details] [associations]
symbol:NEDD1 "Protein NEDD1" species:9606 "Homo sapiens"
[GO:0000242 "pericentriolar material" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0045177
"apical part of cell" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0045177
GO:GO:0005932 GO:GO:0000242 GO:GO:0000922 EMBL:AC007564
EMBL:AC013417 HGNC:HGNC:7723 ProteinModelPortal:G3V4I9 SMR:G3V4I9
Ensembl:ENST00000553609 ArrayExpress:G3V4I9 Bgee:G3V4I9
Uniprot:G3V4I9
Length = 160
Score = 155 (59.6 bits), Expect = 9.9e-11, P = 9.9e-11
Identities = 44/155 (28%), Positives = 76/155 (49%)
Query: 66 HIATGATNGAVVVWNLGQISRSKQ-ERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
++ +G N V +W+L +SK+ R DHK V V++++ + ++ SGS G + L
Sbjct: 2 YLVSGGLNNTVNIWDL----KSKRVHRSLKDHKDQVTCVTYNWNDC-YIASGSLSGEIIL 56
Query: 125 FDIRCQ-ESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQF-TA 182
+ ST H + +SVR ++++ SVS+NG + WDV + ++ F +
Sbjct: 57 HSVTTNLSSTPFGHGSNQSVRHLKYSLFKKSLLGSVSDNGIVTLWDVNS-QSPYHNFDSV 115
Query: 183 HSGPIFACDWHPEHAWL-ATASRDKTIKVWDLSIK 216
H P + P + L T DK I ++D S K
Sbjct: 116 HKAPASGICFSPVNELLFVTIGLDKRIILYDTSSK 150
>POMBASE|SPCC16A11.02 [details] [associations]
symbol:utp13 "U3 snoRNP-associated protein Utp13
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=ISO] [GO:0030490 "maturation of
SSU-rRNA" evidence=ISO] [GO:0030515 "snoRNA binding" evidence=ISO]
[GO:0032040 "small-subunit processome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR013934
InterPro:IPR015943 Pfam:PF00400 Pfam:PF08625 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPCC16A11.02 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0032040 GO:GO:0030490 GO:GO:0005732 HOGENOM:HOG000188765
KO:K14555 OMA:HHFRGSP PIR:T41075 RefSeq:NP_587989.2
ProteinModelPortal:Q9USN3 STRING:Q9USN3 EnsemblFungi:SPCC16A11.02.1
GeneID:2539337 KEGG:spo:SPCC16A11.02 OrthoDB:EOG4DZ53K
NextBio:20800502 Uniprot:Q9USN3
Length = 777
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 66/265 (24%), Positives = 120/265 (45%)
Query: 67 IATGATNGAVVVWNLG-QISRSKQERVFNDHKRTVNKVSFHYVESN----WLISGSQDGT 121
+ATGA + V +WNL + + K VF H +V V+ ++ N +L S SQD T
Sbjct: 379 LATGAKDNTVRLWNLNIEDNVYKCIHVFTGHTASVTAVALGPLDVNGYPTFLASSSQDRT 438
Query: 122 MRLFDIRCQESTKIFHSN---TESVRDVEFNP----HSPYAFASVSENGTIQQWDVRRPE 174
++ F++ Q + F + T D + N AS S++ TI+ WD E
Sbjct: 439 LKRFNLGSQLNKSDFSNRAVWTIKAHDRDVNAIQVSKDGRIIASASQDKTIKLWDSSTGE 498
Query: 175 KCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKW 234
H ++AC ++P LA+ S D+TI++W++ + ++ ++ ++ +
Sbjct: 499 VVGV-LRGHRRGVWACSFNPFSRQLASGSGDRTIRIWNVDTQQCVQTLEGHTGAILKLIY 557
Query: 235 RPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVS 294
Q + S + D V VW + +A+ H+D V LA R D L ++ +
Sbjct: 558 ISQGT-QVVSAA--ADGLVKVWSLSSGEC-VATLDNHEDRVWALASRFDGSLLVSGGADA 613
Query: 295 IIPRAKNI-KIFIASSRVSIIPRAE 318
++ K++ + +IA + R E
Sbjct: 614 VVSVWKDVTEEYIAKQAEELERRVE 638
Score = 165 (63.1 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 59/235 (25%), Positives = 102/235 (43%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLI-SGSQDGTMRLF 125
+ATG G V VW+ I+ + F H ++ + F ++ W++ SG+ D +RL+
Sbjct: 118 LATGGAEGLVKVWD---IAGAYVTHSFRGHGGVISALCFGKHQNTWVLASGADDSRVRLW 174
Query: 126 DIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSG 185
D+ S +F ++ +R + F P + + S + T+Q W++++ HS
Sbjct: 175 DLNSSRSMAVFEGHSSVIRGLTFEPTGSFLLSG-SRDKTVQVWNIKKRSAVRTIPVFHS- 232
Query: 186 PIFACDW---HPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSR--IKWRPQRKF 240
+ A W PE L TA I WD L+ ++T S + I+ P +
Sbjct: 233 -VEAIGWVNGQPEEKILYTAGEGNLILAWDWKSGSRLDPGVDTTHSETNAIIQVVPFSEN 291
Query: 241 HLASCSLVVDSSVNVWDIRR-P---YIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
L S V S +++ +R P +I + D V AW GD L + S+
Sbjct: 292 TLLS----VHSDLSLLLRKRVPGEGFITIKKLNGSFDEVIDCAWIGDDHLAVCSN 342
>ASPGD|ASPL0000062261 [details] [associations]
symbol:AN0310 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:BN001308 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:AACD01000006 HOGENOM:HOG000212580 KO:K14791
OMA:RGVAKET OrthoDB:EOG4DNJCV RefSeq:XP_657914.1
ProteinModelPortal:Q5BGM0 STRING:Q5BGM0
EnsemblFungi:CADANIAT00002402 GeneID:2876087 KEGG:ani:AN0310.2
Uniprot:Q5BGM0
Length = 535
Score = 176 (67.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 54/204 (26%), Positives = 101/204 (49%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
N +A+G+ + V +W+L + +K + + H V + +H ES L++GS D T+
Sbjct: 279 NLLASGSADRTVKLWDL---NTAKSAKSYTHHTDKVCSLDWHPKESTVLLTGSYDRTIVA 335
Query: 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR----PE--KCFY 178
D+R +S + + + V +V ++ H P F + ++ G + ++D+R P+ K +
Sbjct: 336 ADMRAPDSKARWGVDAD-VENVRWDIHDPNYFYATTDAGMVYRYDIRNVPATPKDSKPVW 394
Query: 179 QFTAHSGPIFACDWHPE-HAWLATASRDKTIKVWDL-SIKPSLEYSINT-IASVSRIKWR 235
AH + + D +P +LAT S DK +K+W++ + KPS+ S + V +
Sbjct: 395 SLQAHDSSVSSFDINPAIPGFLATGSTDKQVKLWNVENDKPSMVVSRKLEVGKVFSTTFA 454
Query: 236 PQRK--FHLASCSLVVDSSVNVWD 257
P + F LA +V +WD
Sbjct: 455 PDAEVGFRLAVAGS--KGTVQIWD 476
>TAIR|locus:2179300 [details] [associations]
symbol:TAF5 "AT5G25150" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000394 "RNA
splicing, via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007131 "reciprocal meiotic recombination" evidence=RCA]
[GO:0033044 "regulation of chromosome organization" evidence=RCA]
[GO:0042138 "meiotic DNA double-strand break formation"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR007582 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494
PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0003743 KO:K03130 HOGENOM:HOG000212424 OMA:CATISED
EMBL:AY463620 IPI:IPI00525851 RefSeq:NP_197897.3 UniGene:At.43447
ProteinModelPortal:Q6S7B0 SMR:Q6S7B0 IntAct:Q6S7B0 STRING:Q6S7B0
PaxDb:Q6S7B0 PRIDE:Q6S7B0 EnsemblPlants:AT5G25150.1 GeneID:832586
KEGG:ath:AT5G25150 TAIR:At5g25150 InParanoid:Q6S7B0
PhylomeDB:Q6S7B0 ProtClustDB:CLSN2681648 ArrayExpress:Q6S7B0
Genevestigator:Q6S7B0 Uniprot:Q6S7B0
Length = 669
Score = 176 (67.0 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 57/237 (24%), Positives = 102/237 (43%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYA 155
H V +F ++++S S D T+RL+ + + + + V D +F+P Y
Sbjct: 417 HSGPVYSATFS-PPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHY- 474
Query: 156 FASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSI 215
FAS S + T + W + R + H + WHP ++AT S DKT+++WD+
Sbjct: 475 FASCSHDRTARIWSMDRIQPLRIM-AGHLSDVDCVQWHPNCNYIATGSSDKTVRLWDVQT 533
Query: 216 KPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIR--RPYIPLASFTEHKD 273
+ I + V + P ++ +AS D ++ +WD+ R PL H
Sbjct: 534 GECVRIFIGHRSMVLSLAMSPDGRY-MASGD--EDGTIMMWDLSTARCITPLMG---HNS 587
Query: 274 VVSGLAWRGDPQLFIASSR---VSIIPRAKNIKIFIASSRVSIIPRAENIKIFITSS 327
V L++ G+ L + S V + + K+ A + R +++ F T S
Sbjct: 588 CVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFPTKS 644
Score = 42 (19.8 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 13/52 (25%), Positives = 28/52 (53%)
Query: 36 FVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRS 87
FV THN LN C+ ++ + + +A G ++ ++ VW++ +I ++
Sbjct: 348 FVNTHN-------GLN--CSSISH---DGSLVAGGFSDSSIKVWDMAKIGQA 387
>UNIPROTKB|Q5JKX0 [details] [associations]
symbol:B1147A04.35 "cDNA clone:J013000B23, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0001700
"embryonic development via the syncytial blastoderm" evidence=ISS]
[GO:0005623 "cell" evidence=ISS] [GO:0009909 "regulation of flower
development" evidence=ISS;IDA] [GO:0031124 "mRNA 3'-end processing"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001700 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009793 GO:GO:0005623 GO:GO:0009909
GO:GO:0031124 GO:GO:0080008 EMBL:AP003735 EMBL:AK111493
STRING:Q5JKX0 EnsemblPlants:LOC_Os01g72220.1 OMA:FACAISD
Uniprot:Q5JKX0
Length = 527
Score = 175 (66.7 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 55/225 (24%), Positives = 99/225 (44%)
Query: 59 WSCIEENHIATGATNGAVVVW--NLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
WS EN + TG GA+ W N+ + +K H+ +V +SF + + S
Sbjct: 15 WSN-NENWMVTGDDGGAIKYWQSNMNNVKVNKTA-----HRESVRDLSFCRTDLKFC-SC 67
Query: 117 SQDGTMRLFDI-RCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEK 175
S D T++++D RCQE + + V+ V+++P + S ++ ++ WD + +
Sbjct: 68 SDDTTVKVWDFARCQEERSLTGHGWD-VKSVDWHP-TKSLLVSGGKDYLVKLWDAKSGRE 125
Query: 176 CFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWR 235
F H + W+ W+ TAS+D+ IK++D+ LE V+ + W
Sbjct: 126 -LRSFHGHKNIVQCVKWNQNGNWVLTASKDQIIKLYDIRSMKELESFRGHNKDVTALAWH 184
Query: 236 PQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAW 280
P + + S S D ++ W + + H + V LAW
Sbjct: 185 PFHEEYFVSGSY--DGAIFHWLVGHETPQIEINNAHDNSVWDLAW 227
Score = 152 (58.6 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 39/147 (26%), Positives = 69/147 (46%)
Query: 67 IATGATNGAVVVWNLGQISRSKQE-RVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLF 125
+ +G + V +W+ ++S +E R F+ HK V V ++ NW+++ S+D ++L+
Sbjct: 106 LVSGGKDYLVKLWD----AKSGRELRSFHGHKNIVQCVKWNQ-NGNWVLTASKDQIIKLY 160
Query: 126 DIRCQESTKIFHSNTESVRDVEFNP-HSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHS 184
DIR + + F + + V + ++P H Y F S S +G I W V AH
Sbjct: 161 DIRSMKELESFRGHNKDVTALAWHPFHEEY-FVSGSYDGAIFHWLVGHETPQIEINNAHD 219
Query: 185 GPIFACDWHPEHAWLATASRDKTIKVW 211
++ WHP L + D + W
Sbjct: 220 NSVWDLAWHPVGYLLCSGGNDHATRFW 246
>UNIPROTKB|G4NFB8 [details] [associations]
symbol:MGG_04235 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0043581 "mycelium development" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0043581 EMBL:CM001236
RefSeq:XP_003719579.1 EnsemblFungi:MGG_04235T0 GeneID:2677570
KEGG:mgr:MGG_04235 Uniprot:G4NFB8
Length = 1428
Score = 183 (69.5 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 59/209 (28%), Positives = 93/209 (44%)
Query: 53 SCNDVAWSCIE--ENHIATGATNGAVVVWNL----GQISR--SKQERV-FNDHKRTVNKV 103
S DV W+ + T NG + +++ G I R + + + + R VN +
Sbjct: 105 SIKDVKWASSSGGAQSLYTACGNGKIFHYDITRSFGAIGRPGAALDTITIREDTRQVNAL 164
Query: 104 SFHYVESNWLISGSQDGTMRLFDIRCQEST-------KIFHSN--TESVRDVEFNPHSPY 154
+ +WL+SGSQDG +R FD R S + H+ + VR V+++P +
Sbjct: 165 DVNPHRDSWLLSGSQDGFVRCFDTRDPISINRGGLTFRQIHAGKCNDGVRHVKWSPKEGF 224
Query: 155 AFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACD---WHPEHAWLATASRDKTIKVW 211
FA +++G + +WD R K + AH AC WH + LA+A D + VW
Sbjct: 225 CFACGTDSGVVMKWDSRMSAKPVLRLNAHEANR-ACTTVAWHHDGEHLASAGTDSKLHVW 283
Query: 212 DLSI----KPSLEYSINTIASVSRIKWRP 236
D S K + SI A + + WRP
Sbjct: 284 DASPGADKKQKPKLSITLPAPAAAMTWRP 312
Score = 42 (19.8 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 253 VNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIA 289
V++WD RP +P L W L+ A
Sbjct: 345 VHLWDFARPTMPYREVDRFDVSPMSLLWLDSDLLWTA 381
>UNIPROTKB|G5EHW5 [details] [associations]
symbol:MGCH7_ch7g282 "Uncharacterized protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0030437 "ascospore formation" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009405 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0030437
EMBL:CM000230 EMBL:CM001237 RefSeq:XP_003721234.1
ProteinModelPortal:G5EHW5 EnsemblFungi:MGG_02569T0 GeneID:2682739
KEGG:mgr:MGG_02569 Uniprot:G5EHW5
Length = 1671
Score = 181 (68.8 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 51/163 (31%), Positives = 73/163 (44%)
Query: 56 DVAWSCIEENHIATGAT-NGAVVVWNLGQISRSKQ---ERVFNDHKRTVNKVSFHYVESN 111
DV WS +T N +VWNL S E H R + ++F +
Sbjct: 86 DVQWSPFAARDYWVASTANHRCLVWNLNFRDDSASGPIEHSLQGHSRAITDINFSAHHPD 145
Query: 112 WLISGSQDGTMRLFDIRC-QESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDV 170
L++ S DG + +D+R Q+ + F T V+F+ P+ AS S + + WD
Sbjct: 146 LLVTCSVDGYVHNWDLRRPQQPAESFCDWTAGATQVKFSRQDPHMLAS-SHDRLLHIWDE 204
Query: 171 RRPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWD 212
RRP + AHS I+ DW+ A L T S DK+IK WD
Sbjct: 205 RRPVEPVKTIMAHSSKIYGIDWNRTRASALVTCSLDKSIKFWD 247
Score = 130 (50.8 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 32/133 (24%), Positives = 61/133 (45%)
Query: 132 STKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIF 188
S I HS ++ ++ D+ F+ H P + S +G + WD+RRP++ F +
Sbjct: 120 SGPIEHSLQGHSRAITDINFSAHHPDLLVTCSVDGYVHNWDLRRPQQPAESFCDWTAGAT 179
Query: 189 ACDWHPEHAWLATASRDKTIKVWD--LSIKPSLEYSINTIASVSRIKWRPQRKFHLASCS 246
+ + + +S D+ + +WD ++P ++ + + I W R L +CS
Sbjct: 180 QVKFSRQDPHMLASSHDRLLHIWDERRPVEPVKTIMAHS-SKIYGIDWNRTRASALVTCS 238
Query: 247 LVVDSSVNVWDIR 259
L D S+ WD +
Sbjct: 239 L--DKSIKFWDYK 249
>DICTYBASE|DDB_G0282189 [details] [associations]
symbol:tupA "transcriptional repressor TUP1"
species:44689 "Dictyostelium discoideum" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0282189 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GenomeReviews:CM000152_GR eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 EMBL:AAFI02000046
HSSP:P16649 KO:K06666 InterPro:IPR013890 Pfam:PF08581
ProDom:PD010558 EMBL:AF079369 RefSeq:XP_640309.1
ProteinModelPortal:O76734 SMR:O76734 STRING:O76734 PRIDE:O76734
EnsemblProtists:DDB0214909 GeneID:8623485 KEGG:ddi:DDB_G0282189
OMA:HNSVVCC ProtClustDB:CLSZ2729020 Uniprot:O76734
Length = 579
Score = 175 (66.7 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 74/324 (22%), Positives = 138/324 (42%)
Query: 32 KDTEFVETHNLRVGKNINL----NFSCNDVAWSCI----EENHIATGATNGAVVVWNLGQ 83
K T+++ +N V N+N+ N N V C+ + ++ATG A +
Sbjct: 254 KGTDWLVGYNPSVQTNLNIDLLHNLQHNSVV-CCVNFSNDGKYLATGCNRSAQIY----D 308
Query: 84 ISRSKQERVFNDHKRT-----VNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHS 138
+ K+ F D + V F + N+L +G++D T++++DI ++ F+
Sbjct: 309 VDTGKKVHAFVDESEKDGDLYIRSVCFS-PDGNYLATGAEDKTVKVWDIHTKKIQHTFYG 367
Query: 139 NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP---IFACDWHPE 195
+ + ++++ + S S + + WD+ + + F GP + + P+
Sbjct: 368 HELDIYSLDYSSDGRF-IVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPD 426
Query: 196 HAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNV 255
+A S D +++WD LE + SV + + P K LAS SL D S+ +
Sbjct: 427 GRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGK-SLASGSL--DKSLKL 483
Query: 256 WDI---RRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSII----PRAKNIKIFIAS 308
WD+ R A+F HKD V +A+ D I+ S+ + PR + +
Sbjct: 484 WDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQG 543
Query: 309 SRVSII-----PRAENIKIFITSS 327
+ S+I P+ + +F T S
Sbjct: 544 HKNSVISVALSPKNNSHGVFATGS 567
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 37/119 (31%), Positives = 64/119 (53%)
Query: 53 SCNDVAWSCIEENHIATGATNGAVVVWNL-GQISRSKQERVFNDHKRTVNKVSFHYVESN 111
S VA+S + +A+G+ + ++ +W+L G SRS+ FN HK V V+F + +
Sbjct: 459 SVYSVAFSP-DGKSLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFS-PDGS 516
Query: 112 WLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNP--HSPYAFASVSENGTIQQW 168
WLISGS+D +++ +D R + + + SV V +P +S FA+ S + + W
Sbjct: 517 WLISGSKDRSVQFWDPRNGTTHMMLQGHKNSVISVALSPKNNSHGVFATGSGDFRSRLW 575
>ASPGD|ASPL0000076931 [details] [associations]
symbol:AN8701 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006575 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50089 PROSITE:PS50294
PROSITE:PS50908 SMART:SM00184 SMART:SM00320 SMART:SM00591
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0046872 GO:GO:0008270
eggNOG:COG2319 EMBL:AACD01000160 EMBL:BN001303 OrthoDB:EOG43BQX2
RefSeq:XP_681970.1 ProteinModelPortal:Q5ASM9
EnsemblFungi:CADANIAT00006369 GeneID:2868536 KEGG:ani:AN8701.2
HOGENOM:HOG000202249 OMA:ITSWEVA Uniprot:Q5ASM9
Length = 1462
Score = 179 (68.1 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 68/244 (27%), Positives = 101/244 (41%)
Query: 56 DVAWSCIE-ENHIATGATNGAVVVWNLGQIS-RSKQERVFNDHKRTVNKVSFHYVESNWL 113
DV WS ++ +N +VWNL S ++ E V + H R + ++F + L
Sbjct: 76 DVQWSPFAARDYWVVSTSNQKALVWNLAMRSYQNSIEHVLHAHTRAITDINFSAHHPDIL 135
Query: 114 ISGSQDGTMRLFDIRCQESTKIFHSNT-ESVRDVEFNPHSPYAFASVSENGTIQQWDVRR 172
+ + D + +D+R I S+ V++N +P AS S + ++ WD R
Sbjct: 136 ATCAVDSFVHCWDLRATSRPAISFSDWFAGATQVKWNRQNPNVIAS-SHDRYLRIWDKRM 194
Query: 173 PEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSIKPSL-EYSINTIASVS 230
AH I+ DW+ LAT S DKTIK WD +++ + E I T V
Sbjct: 195 GAYPIRSIVAHDTKIYGVDWNRVRPGALATCSLDKTIKFWDYTVEDDVPEKVIKTPFPVW 254
Query: 231 RIK-----W----RPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWR 281
R + W PQR + L +V D P+ SF HK V WR
Sbjct: 255 RARNTPFGWGVLAMPQRGN--SDLHLYSRRAVEGADPDNHLAPVHSFPGHKGQVKEFLWR 312
Query: 282 --GD 283
GD
Sbjct: 313 ARGD 316
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 174 (66.3 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 63/267 (23%), Positives = 118/267 (44%)
Query: 34 TEFVETHNLRVG-KNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNL-GQISRSKQER 91
T+ V H +R G ++ N + W+ +ATG+ +G +W G ++ +
Sbjct: 270 TQLVLRHCIREGGHDVPSNKDVTSLDWNT-NGTLLATGSYDGFARIWTEDGNLAST---- 324
Query: 92 VFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPH 151
HK + + ++ + N+++S D T ++D E+ + F ++ DV++ +
Sbjct: 325 -LGQHKGPIFALKWNR-KGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN 382
Query: 152 SPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVW 211
+ +A S + + RP K F H+ + A W P LA+ S D T+K+W
Sbjct: 383 TTFASCSTDMCIHVCRLGCDRPVKTFQ---GHTNEVNAIKWDPSGMLLASCSDDMTLKIW 439
Query: 212 DLSIKPSLEYSINTIASVSRIKW--------RPQRKFHLASCSLVVDSSVNVWDIRRPYI 263
+ + + + IKW P LAS S DS+V +WDI R +
Sbjct: 440 SMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASF--DSTVRLWDIERG-V 496
Query: 264 PLASFTEHKDVVSGLAWRGDPQLFIAS 290
+ T+H++ V +A+ D + ++AS
Sbjct: 497 CTHTLTKHQEPVYSVAFSPDGK-YLAS 522
Score = 155 (59.6 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 50/214 (23%), Positives = 97/214 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV W A+ +T+ + V LG + + F H VN + + S L++
Sbjct: 376 DVDWQ--NNTTFASCSTDMCIHVCRLGC---DRPVKTFQGHTNEVNAIKWD--PSGMLLA 428
Query: 116 G-SQDGTMRLFDIRCQESTKIFHSNTESVRDVEF--------NPHSPYAFASVSENGTIQ 166
S D T++++ ++ + ++ + + +++ NP+S AS S + T++
Sbjct: 429 SCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVR 488
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTI 226
WD+ R C + T H P+++ + P+ +LA+ S DK + +W+ +L +S
Sbjct: 489 LWDIERGV-CTHTLTKHQEPVYSVAFSPDGKYLASGSFDKCVHIWNTQ-SGNLVHSYRGT 546
Query: 227 ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
+ + W + AS S D SV V D+R+
Sbjct: 547 GGIFEVCWNARGDKVGASAS---DGSVCVLDLRK 577
Score = 120 (47.3 bits), Expect = 0.00029, P = 0.00029
Identities = 61/244 (25%), Positives = 105/244 (43%)
Query: 63 EENHIATGATNGAVVVWNLGQIS-RSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGT 121
EEN A N A + G++ S + V H+ V +++ V S+ L SGS D T
Sbjct: 198 EENR-AHSVNNHAKPMEIDGEVEIPSSKATVLRGHESEVFICAWNPV-SDLLASGSGDST 255
Query: 122 MRLFDIRCQE---STKIF--HSNTESVRDVEFNPH--------SPYAFASVSENGTIQQW 168
R++++ ST++ H E DV N + A+ S +G + W
Sbjct: 256 ARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIW 315
Query: 169 DVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTIA 227
H GPIFA W+ + ++ +A DKT +WD + ++ ++
Sbjct: 316 T--EDGNLASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAP 373
Query: 228 SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQ-L 286
++ + W+ F ASCS D ++V + P+ +F H + V+ + W DP +
Sbjct: 374 ALD-VDWQNNTTF--ASCS--TDMCIHVCRLGCDR-PVKTFQGHTNEVNAIKW--DPSGM 425
Query: 287 FIAS 290
+AS
Sbjct: 426 LLAS 429
>POMBASE|SPAC57A10.05c [details] [associations]
symbol:pof1 "F-box/WD repeat protein protein Pof1"
species:4896 "Schizosaccharomyces pombe" [GO:0005634 "nucleus"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0019005 "SCF ubiquitin ligase complex"
evidence=IDA] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IPI] [GO:0071276 "cellular
response to cadmium ion" evidence=IEP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 PomBase:SPAC57A10.05c
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0071276 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0019005 GO:GO:0042787
HOGENOM:HOG000166480 KO:K10259 OrthoDB:EOG496313 EMBL:AB032410
PIR:T38932 RefSeq:NP_593310.1 ProteinModelPortal:P87053
IntAct:P87053 STRING:P87053 EnsemblFungi:SPAC57A10.05c.1
GeneID:2542914 KEGG:spo:SPAC57A10.05c NextBio:20803951
Uniprot:P87053
Length = 605
Score = 174 (66.3 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 58/222 (26%), Positives = 98/222 (44%)
Query: 41 NLRVGKNINLNFSCNDVAWSCIE--ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKR 98
N R G+ + S + C++ N +A+G+ + + +WNL +Q + H
Sbjct: 258 NWRHGRCRQVVLSGHSDGVMCLQLVRNILASGSYDATIRLWNLATF---QQVALLEGHSS 314
Query: 99 TVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFAS 158
V + F + LISGS D T+R+++ R E I H +T+SV + F+ S
Sbjct: 315 GVTCLQFDQCK---LISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTFDST---LLVS 368
Query: 159 VSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPS 218
S + T++ W ++ + H+GP+ + + + + S D TIK+W L
Sbjct: 369 GSADCTVKLWHFSGGKRITLR--GHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTC 426
Query: 219 LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
L I V + R F SCSL D ++ WDI +
Sbjct: 427 LHTFSAHIGPVQSLALADSRLF---SCSL--DGTIKQWDIEK 463
Score = 119 (46.9 bits), Expect = 0.00040, P = 0.00040
Identities = 48/200 (24%), Positives = 85/200 (42%)
Query: 60 SCIEENH--IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGS 117
+C++ + + +G+ + + +WN S+ + + H +V ++F +S L+SGS
Sbjct: 317 TCLQFDQCKLISGSMDKTIRIWNY---RTSECISILHGHTDSVLCLTF---DSTLLVSGS 370
Query: 118 QDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCF 177
D T++L+ + + +T V V + S++ TI+ W + C
Sbjct: 371 ADCTVKLWHFSGGKRITL-RGHTGPVNSVRIIRDRGLVLSG-SDDSTIKIWSLET-NTCL 427
Query: 178 YQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQ 237
+ F+AH GP+ + L + S D TIK WD+ K + I V W
Sbjct: 428 HTFSAHIGPVQSLALADSR--LFSCSLDGTIKQWDIEKKKCVHTLFGHIEGV----WEIA 481
Query: 238 RKFHLASCSLVVDSSVNVWD 257
HL S D V VW+
Sbjct: 482 AD-HLRLISGAHDGVVKVWE 500
>UNIPROTKB|Q3B7M6 [details] [associations]
symbol:NEDD1 "Protein NEDD1" species:9913 "Bos taurus"
[GO:0045177 "apical part of cell" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0000242
"pericentriolar material" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0051301 GO:GO:0007067 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0045177 GO:GO:0005932 GO:GO:0000242 GO:GO:0000922
EMBL:BC107541 IPI:IPI00708143 RefSeq:NP_001030410.1
UniGene:Bt.41689 ProteinModelPortal:Q3B7M6 STRING:Q3B7M6
Ensembl:ENSBTAT00000002464 GeneID:519463 KEGG:bta:519463 CTD:121441
GeneTree:ENSGT00390000001561 HOGENOM:HOG000034642
HOVERGEN:HBG055623 InParanoid:Q3B7M6 KO:K16547 OMA:FSPIRDD
OrthoDB:EOG4NZTSQ NextBio:20872882 Uniprot:Q3B7M6
Length = 659
Score = 174 (66.3 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 58/233 (24%), Positives = 110/233 (47%)
Query: 60 SCIEEN----HIATGATNGAVVVWNLGQISRSKQ-ERVFNDHKRTVNKVSFHYVESNWLI 114
+C+ N ++ +G N V +W+L +SK+ R DHK V V++++ + ++
Sbjct: 81 TCVSLNSTSMYLVSGGLNNTVNIWDL----KSKRVHRSLKDHKDEVTCVTYNWNDC-YIA 135
Query: 115 SGSQDGTMRLFDIRCQ-ESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRP 173
SGS G + L + ST H + +S+R ++++ SVS+NG + WDV
Sbjct: 136 SGSLSGEIILHSVTTNLSSTPFGHGSNQSIRHLKYSLFKKSLLGSVSDNGIVTLWDVNS- 194
Query: 174 EKCFYQF-TAHSGPIFACDWHPEHAWL-ATASRDKTIKVWDLSIKPSLEYSINTIASVSR 231
+ ++ F + H P + P + L T DK I ++D S K L ++ A ++
Sbjct: 195 QSPYHNFDSTHKAPASGICFSPVNELLFVTVGLDKRIILYDTSSK-KLVKTLVADAPLTA 253
Query: 232 IKWRPQRKFHLASCSLVVDSS---VNVWDIRRPYIPLASFTEHKDVVSGLAWR 281
+ + P +L + SS + +D+R P+ + + HK V +A++
Sbjct: 254 VDFMPD------GATLAIGSSRGKIYQYDLRMLKSPIKTISAHKTSVQCIAFQ 300
>MGI|MGI:97293 [details] [associations]
symbol:Nedd1 "neural precursor cell expressed, developmentally
down-regulated gene 1" species:10090 "Mus musculus" [GO:0000242
"pericentriolar material" evidence=IDA] [GO:0000922 "spindle pole"
evidence=IDA] [GO:0000924 "gamma-tubulin ring complex, centrosomal"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005814 "centriole"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IDA] [GO:0007019 "microtubule
depolymerization" evidence=ISO] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0031109
"microtubule polymerization or depolymerization" evidence=ISO]
[GO:0045177 "apical part of cell" evidence=IDA] [GO:0051301 "cell
division" evidence=IEA] [GO:0070201 "regulation of establishment of
protein localization" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:97293 GO:GO:0051301
GO:GO:0007067 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0045177
GO:GO:0005932 GO:GO:0000922 GO:GO:0007019 GO:GO:0070201 CTD:121441
GeneTree:ENSGT00390000001561 HOGENOM:HOG000034642
HOVERGEN:HBG055623 KO:K16547 OMA:FSPIRDD OrthoDB:EOG4NZTSQ
EMBL:D10712 EMBL:AK048393 EMBL:AK085355 EMBL:AK090040 EMBL:AK010591
EMBL:AK153746 EMBL:BC052430 EMBL:BC066870 IPI:IPI00110438
IPI:IPI00656324 PIR:I60167 RefSeq:NP_032708.2 UniGene:Mm.2998
ProteinModelPortal:P33215 SMR:P33215 IntAct:P33215 STRING:P33215
PhosphoSite:P33215 PaxDb:P33215 PRIDE:P33215
Ensembl:ENSMUST00000020163 GeneID:17997 KEGG:mmu:17997
UCSC:uc007gud.2 UCSC:uc007gue.2 InParanoid:P33215 NextBio:292991
Bgee:P33215 Genevestigator:P33215 GermOnline:ENSMUSG00000019988
GO:GO:0000924 Uniprot:P33215
Length = 660
Score = 174 (66.3 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 60/242 (24%), Positives = 114/242 (47%)
Query: 60 SCIEEN----HIATGATNGAVVVWNLGQISRSKQ-ERVFNDHKRTVNKVSFHYVESNWLI 114
+C++ N ++A+G N V +W+L +SK+ R DHK V V++++ + ++
Sbjct: 81 TCVDLNSTSMYLASGGLNNTVNIWDL----KSKRLHRSLKDHKCEVTCVAYNWNDC-YIA 135
Query: 115 SGSQDGTMRLFDIRCQESTKIF-HSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRP 173
SGS G + L + S+ F H + + +R ++++ SVS+NG + WDV
Sbjct: 136 SGSLSGEIILHSVTTNTSSTPFGHGSKQPIRHIKYSLFRKSLLGSVSDNGVVTLWDVNS- 194
Query: 174 EKCFYQF-TAHSGPIFACDWHPEHAWL-ATASRDKTIKVWDLSIKPSLEYSINTIASVSR 231
+ ++ F + H P + P + L T DK I ++D S K L ++ ++
Sbjct: 195 QSSYHTFDSTHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSK-KLVKTLVADTPLTA 253
Query: 232 IKWRPQRKFHLASCSLVVDSS---VNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFI 288
+ + P +L + SS + +D+R P+ + + HK V +A++ L
Sbjct: 254 VDFMPD------GATLAIGSSRGKIYQYDLRMLKSPVKTISAHKTSVQCIAFQYSTSLTK 307
Query: 289 AS 290
AS
Sbjct: 308 AS 309
>MGI|MGI:2442115 [details] [associations]
symbol:Wdr59 "WD repeat domain 59" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006575 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50908 SMART:SM00320 SMART:SM00591
MGI:MGI:2442115 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GeneTree:ENSGT00650000093352
OMA:TGGWNIA CTD:79726 HOVERGEN:HBG092820 EMBL:EF011622
EMBL:AK173301 EMBL:AK030644 EMBL:AK040807 EMBL:AK052262
EMBL:AK136303 EMBL:AK170910 EMBL:BC066082 IPI:IPI00263940
IPI:IPI00469939 IPI:IPI00955111 RefSeq:NP_001164213.1
RefSeq:NP_001164214.1 RefSeq:NP_795897.2 UniGene:Mm.247294
ProteinModelPortal:Q8C0M0 SMR:Q8C0M0 PhosphoSite:Q8C0M0
PRIDE:Q8C0M0 Ensembl:ENSMUST00000038193 GeneID:319481
KEGG:mmu:319481 UCSC:uc009nmi.2 UCSC:uc009nmj.2 NextBio:394820
Bgee:Q8C0M0 CleanEx:MM_WDR59 Genevestigator:Q8C0M0 Uniprot:Q8C0M0
Length = 992
Score = 176 (67.0 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 50/194 (25%), Positives = 92/194 (47%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYA 155
H R ++ + + E + L++ S D + ++DI+ + S V++N +
Sbjct: 104 HTRVISDLDWAVFEPDLLVTSSVDTYIYIWDIKDTRKPTVALSAVAGASQVKWNKKNANY 163
Query: 156 FASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHP--EHAWLATASRDKTIKVWDL 213
A+ S +G ++ WD R+P AH I DWHP EH + AT+S+D ++K WD
Sbjct: 164 LAT-SHDGDVRIWDKRKPSTAVEYLAAHLSKIHGLDWHPDSEHIF-ATSSQDNSVKFWDY 221
Query: 214 SIKPSLEYSINTIASVSRIKWRPQ-RKFHLASCSLVV-----DSSVNVWDIRRPYIPLAS 267
+P +Y +N + + W+ + F +++V ++S+ +W+ P+ +
Sbjct: 222 R-QPR-KY-LNILPCQVPV-WKARYTPFSNGLVTVMVPQLRRENSLLLWNASDLNAPVHT 277
Query: 268 FTEHKDVVSGLAWR 281
F H DVV WR
Sbjct: 278 FVGHDDVVLEFQWR 291
Score = 154 (59.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 52/207 (25%), Positives = 93/207 (44%)
Query: 93 FNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHS 152
F D + T +S + + ++SG + + D + KI + + V++NPH
Sbjct: 14 FRDSQATA--MSVDCLGQHAVLSGRRFLYIVNLDAPFEGHRKISRQSKWDIGAVQWNPHD 71
Query: 153 PYAF---ASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHP-EHAWLATASRDKTI 208
+A AS ++ + +W E H+ I DW E L T+S D I
Sbjct: 72 SFAHYFAASSNQRVDLYKWKDGSGE-VGTTLQGHTRVISDLDWAVFEPDLLVTSSVDTYI 130
Query: 209 KVWDL--SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266
+WD+ + KP++ +++ +A S++KW + +LA+ D V +WD R+P +
Sbjct: 131 YIWDIKDTRKPTV--ALSAVAGASQVKWNKKNANYLATSH---DGDVRIWDKRKPSTAVE 185
Query: 267 SFTEHKDVVSGLAWRGDPQ-LFIASSR 292
H + GL W D + +F SS+
Sbjct: 186 YLAAHLSKIHGLDWHPDSEHIFATSSQ 212
Score = 141 (54.7 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 45/219 (20%), Positives = 106/219 (48%)
Query: 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLI 114
+D+ W+ E + + T + + + +W+ I +++ V ++V ++ +N+L
Sbjct: 109 SDLDWAVFEPDLLVTSSVDTYIYIWD---IKDTRKPTVALSAVAGASQVKWNKKNANYLA 165
Query: 115 SGSQDGTMRLFDIRCQESTKIFH--SNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR 172
+ S DG +R++D R + ST + + ++ + ++++P S + FA+ S++ +++ WD R+
Sbjct: 166 T-SHDGDVRIWDKR-KPSTAVEYLAAHLSKIHGLDWHPDSEHIFATSSQDNSVKFWDYRQ 223
Query: 173 PEKCFYQFTAHSGPIFACDWHPEHAWLATAS-----RDKTIKVWDLSIKPSLEYSINTIA 227
P K + P++ + P L T R+ ++ +W+ S L ++T
Sbjct: 224 PRK-YLNILPCQVPVWKARYTPFSNGLVTVMVPQLRRENSLLLWNAS---DLNAPVHTFV 279
Query: 228 S----VSRIKWRPQRK----FHLASCSLVVDSSVNVWDI 258
V +WR Q++ + L + S D ++ +W +
Sbjct: 280 GHDDVVLEFQWRRQKEGSKDYQLVTWSR--DQTLRMWRV 316
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 150 (57.9 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 42/153 (27%), Positives = 70/153 (45%)
Query: 124 LFDIRCQESTKIFHS---NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQF 180
++D R ++K HS +T V + FNP+S + A+ S + T+ WD+R + + F
Sbjct: 2 IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF 61
Query: 181 TAHSGPIFACDWHPEHAW-LATASRDKTIKVWDLSI-------------KPSLEYSINT- 225
+H IF W P + LA++ D+ + VWDLS P L +
Sbjct: 62 ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH 121
Query: 226 IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
A +S W P + + CS+ D+ + VW +
Sbjct: 122 TAKISDFSWNPNEPWVI--CSVSEDNIMQVWQM 152
Score = 134 (52.2 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 35/153 (22%), Positives = 68/153 (44%)
Query: 77 VVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR-CQESTKI 135
++W+ + SK + H VN +SF+ L +GS D T+ L+D+R +
Sbjct: 1 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHS 60
Query: 136 FHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-------------PEKCFYQFTA 182
F S+ + + V+++PH+ AS + + WD+ + P + +
Sbjct: 61 FESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGG 120
Query: 183 HSGPIFACDWHPEHAW-LATASRDKTIKVWDLS 214
H+ I W+P W + + S D ++VW ++
Sbjct: 121 HTAKISDFSWNPNEPWVICSVSEDNIMQVWQMA 153
Score = 115 (45.5 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 29/97 (29%), Positives = 48/97 (49%)
Query: 168 WDVR--RPEKCFYQFTAHSGPIFACDWHPEHAW-LATASRDKTIKVWDL-SIKPSLEYSI 223
WD R K + AH+ + ++P + LAT S DKT+ +WDL ++K L
Sbjct: 3 WDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE 62
Query: 224 NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
+ + +++W P + LAS D +NVWD+ +
Sbjct: 63 SHKDEIFQVQWSPHNETILASSG--TDRRLNVWDLSK 97
Score = 105 (42.0 bits), Expect = 0.00093, P = 0.00093
Identities = 28/86 (32%), Positives = 44/86 (51%)
Query: 210 VWDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPL 265
+WD + KPS +T A V+ + + P +F LA+ S D +V +WD+R + L
Sbjct: 2 IWDTRSNNTSKPSHSVDAHT-AEVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKL 58
Query: 266 ASFTEHKDVVSGLAWRGDPQLFIASS 291
SF HKD + + W + +ASS
Sbjct: 59 HSFESHKDEIFQVQWSPHNETILASS 84
>MGI|MGI:1337100 [details] [associations]
symbol:Wdr1 "WD repeat domain 1" species:10090 "Mus
musculus" [GO:0003779 "actin binding" evidence=ISA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007605 "sensory perception of sound" evidence=ISA] [GO:0015629
"actin cytoskeleton" evidence=ISA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1337100 GO:GO:0005737
GO:GO:0003779 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0015629 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007605 HOVERGEN:HBG000780 CTD:9948
OrthoDB:EOG4WH8KB OMA:LKDQKKC ChiTaRS:WDR1 EMBL:AF020055
IPI:IPI00314748 RefSeq:NP_035845.1 UniGene:Mm.2654
UniGene:Mm.406120 ProteinModelPortal:O88342 SMR:O88342
STRING:O88342 PhosphoSite:O88342 REPRODUCTION-2DPAGE:IPI00314748
REPRODUCTION-2DPAGE:O88342 UCD-2DPAGE:O88342 PaxDb:O88342
PRIDE:O88342 Ensembl:ENSMUST00000005234 GeneID:22388 KEGG:mmu:22388
InParanoid:O88342 NextBio:302759 Bgee:O88342 CleanEx:MM_WDR1
Genevestigator:O88342 GermOnline:ENSMUSG00000005103 Uniprot:O88342
Length = 606
Score = 173 (66.0 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 64/231 (27%), Positives = 93/231 (40%)
Query: 56 DVAWSCIEENHIATGATN---GAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNW 112
D+AW+ + G GAV +W+ G S E H + +N V
Sbjct: 107 DIAWTEDSKRIAVVGEGREKFGAVFLWDTGS---SVGE--ITGHNKVINSVDIKQTRPYR 161
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR 172
L +GS D F+ + ++ V V F+P FA+ S +G I +D +
Sbjct: 162 LATGSDDNCAAFFEGPPFKFKFTIGDHSRFVNCVRFSPDGN-RFATASADGQIFIYDGKT 220
Query: 173 PEK-CFY-QFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL---SIKPSLEYSINTIA 227
EK C + AH G I+A W P+ L +AS DKT K+WD+ S+ + N +
Sbjct: 221 GEKVCALGESKAHDGGIYAISWSPDSTHLLSASGDKTSKIWDVNVNSVVSTFPMGSNVLD 280
Query: 228 SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGL 278
W+ K HL S SL +N D P PL H + L
Sbjct: 281 QQLGCLWQ---KDHLLSISL--SGYINYLDKNNPSKPLRVIKGHSKSIQCL 326
>CGD|CAL0000650 [details] [associations]
symbol:orf19.2307 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005847 "mRNA cleavage and
polyadenylation specificity factor complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:2000045 "regulation of G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0006379
"mRNA cleavage" evidence=IEA] [GO:0006378 "mRNA polyadenylation"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0000650 GO:GO:0005634 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397 EMBL:AACQ01000114
EMBL:AACQ01000113 RefSeq:XP_713912.1 RefSeq:XP_713970.1
ProteinModelPortal:Q59WJ4 STRING:Q59WJ4 GeneID:3644356
GeneID:3644415 KEGG:cal:CaO19.2307 KEGG:cal:CaO19.9843 KO:K15542
Uniprot:Q59WJ4
Length = 543
Score = 172 (65.6 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 55/249 (22%), Positives = 111/249 (44%)
Query: 37 VETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDH 96
++T + + N + + N V W+ E + + +G +WN G E + H
Sbjct: 122 LQTKFVHLSSN-KVKHTINTVKWTP-EGRRLLVASHSGEFTLWN-GMTFNF--ETIMQAH 176
Query: 97 KRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIF-HSNTESVRDVEFNPHSPYA 155
+ + + + WL+SG Q+GT++ + I H+N VRD+ F+P+
Sbjct: 177 ESPILTMKYSN-HDEWLLSGDQNGTVKYWQPNFNNVNNISAHAN--GVRDIAFSPNDS-K 232
Query: 156 FASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSI 215
F + ++ I+ W+ ++ + H + + DWHP + + S+D +K+WD
Sbjct: 233 FLTCGDDSAIKIWNFNNGKE-ERTLSGHHWEVKSADWHPNLGLIVSGSKDNLVKLWD--- 288
Query: 216 KPSLEYSINTIA----SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEH 271
P ++T+ +V++ +++P L + S+ D S ++D+R L
Sbjct: 289 -PRSANCVSTLHGFKHTVNKTRFQPNGTARLLA-SVSRDRSCRIFDLRTMKDMLVIRDSE 346
Query: 272 KDVVSGLAW 280
D+ S +AW
Sbjct: 347 TDL-SCVAW 354
Score = 133 (51.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 38/150 (25%), Positives = 67/150 (44%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
D+A+S + + G + A+ +WN + K+ER + H V +H ++S
Sbjct: 223 DIAFSPNDSKFLTCG-DDSAIKIWNF---NNGKEERTLSGHHWEVKSADWH-PNLGLIVS 277
Query: 116 GSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPH-SPYAFASVSENGTIQQWDVRRPE 174
GS+D ++L+D R H +V F P+ + ASVS + + + +D+R +
Sbjct: 278 GSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDLRTMK 337
Query: 175 KCFYQFTAHSGPIFAC-DWHPEHAWLATAS 203
S +C WHP HA + T +
Sbjct: 338 DMLV--IRDSETDLSCVAWHPIHASMVTTA 365
Score = 48 (22.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 17/66 (25%), Positives = 27/66 (40%)
Query: 224 NTIASVSRIKWRPQRKFHLAS--------CSLVVDSSVNVWDIRRPYIPLA-SFTEHKDV 274
NTI +V +I + ++ H C+ D + W RP P+A + D
Sbjct: 403 NTIDAVQKIPYAHEKAIHAVEYHPLGHLLCTAGSDKTARFWSRARPNDPMAWKDAVYTDS 462
Query: 275 VSGLAW 280
+G AW
Sbjct: 463 KAG-AW 467
>UNIPROTKB|Q59WJ4 [details] [associations]
symbol:PFS2 "Polyadenylation factor subunit 2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0000650 GO:GO:0005634
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0006397
EMBL:AACQ01000114 EMBL:AACQ01000113 RefSeq:XP_713912.1
RefSeq:XP_713970.1 ProteinModelPortal:Q59WJ4 STRING:Q59WJ4
GeneID:3644356 GeneID:3644415 KEGG:cal:CaO19.2307
KEGG:cal:CaO19.9843 KO:K15542 Uniprot:Q59WJ4
Length = 543
Score = 172 (65.6 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 55/249 (22%), Positives = 111/249 (44%)
Query: 37 VETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDH 96
++T + + N + + N V W+ E + + +G +WN G E + H
Sbjct: 122 LQTKFVHLSSN-KVKHTINTVKWTP-EGRRLLVASHSGEFTLWN-GMTFNF--ETIMQAH 176
Query: 97 KRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIF-HSNTESVRDVEFNPHSPYA 155
+ + + + WL+SG Q+GT++ + I H+N VRD+ F+P+
Sbjct: 177 ESPILTMKYSN-HDEWLLSGDQNGTVKYWQPNFNNVNNISAHAN--GVRDIAFSPNDS-K 232
Query: 156 FASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSI 215
F + ++ I+ W+ ++ + H + + DWHP + + S+D +K+WD
Sbjct: 233 FLTCGDDSAIKIWNFNNGKE-ERTLSGHHWEVKSADWHPNLGLIVSGSKDNLVKLWD--- 288
Query: 216 KPSLEYSINTIA----SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEH 271
P ++T+ +V++ +++P L + S+ D S ++D+R L
Sbjct: 289 -PRSANCVSTLHGFKHTVNKTRFQPNGTARLLA-SVSRDRSCRIFDLRTMKDMLVIRDSE 346
Query: 272 KDVVSGLAW 280
D+ S +AW
Sbjct: 347 TDL-SCVAW 354
Score = 133 (51.9 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 38/150 (25%), Positives = 67/150 (44%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
D+A+S + + G + A+ +WN + K+ER + H V +H ++S
Sbjct: 223 DIAFSPNDSKFLTCG-DDSAIKIWNF---NNGKEERTLSGHHWEVKSADWH-PNLGLIVS 277
Query: 116 GSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPH-SPYAFASVSENGTIQQWDVRRPE 174
GS+D ++L+D R H +V F P+ + ASVS + + + +D+R +
Sbjct: 278 GSKDNLVKLWDPRSANCVSTLHGFKHTVNKTRFQPNGTARLLASVSRDRSCRIFDLRTMK 337
Query: 175 KCFYQFTAHSGPIFAC-DWHPEHAWLATAS 203
S +C WHP HA + T +
Sbjct: 338 DMLV--IRDSETDLSCVAWHPIHASMVTTA 365
Score = 48 (22.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 17/66 (25%), Positives = 27/66 (40%)
Query: 224 NTIASVSRIKWRPQRKFHLAS--------CSLVVDSSVNVWDIRRPYIPLA-SFTEHKDV 274
NTI +V +I + ++ H C+ D + W RP P+A + D
Sbjct: 403 NTIDAVQKIPYAHEKAIHAVEYHPLGHLLCTAGSDKTARFWSRARPNDPMAWKDAVYTDS 462
Query: 275 VSGLAW 280
+G AW
Sbjct: 463 KAG-AW 467
>UNIPROTKB|O59894 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:4922 "Komagataella pastoris" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0015031 EMBL:AF021797
ProteinModelPortal:O59894 Uniprot:O59894
Length = 376
Score = 169 (64.5 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 56/212 (26%), Positives = 94/212 (44%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
V WS I++N + + +G+V VW+ G +R+ K +E I
Sbjct: 110 VDWSNIDKNLFCSASWDGSVKVWSPGS-NRNTSLLTLRSLASREEKTG--RIEKP--IPV 164
Query: 117 SQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
Q + + R I + N + V D +F+ H P S + + +Q WD R P
Sbjct: 165 VQPSQVPMSKTR----PNIRNDNNDCVYDAKFSFHDPNIIMSCNSDSHLQLWDTRLPNPL 220
Query: 177 FYQFTAHSG-PIFACDWHPEHAWL-ATASRDKTIKVWDLS-IKPSLEY----SINTIA-- 227
F F AH+G +CD++ ++ A+A DK KVWD I+P++ ++N
Sbjct: 221 FMDFVAHNGLEALSCDFNRYRPFVVASAGVDKLAKVWDTRMIQPNVHSRPPRALNKFMGH 280
Query: 228 --SVSRIKWRPQRKFHLASCSLVVDSSVNVWD 257
++ ++ W P L +CS D +V VW+
Sbjct: 281 EFAIRKLAWSPHGPTQLLTCSY--DMTVRVWN 310
Score = 141 (54.7 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 49/201 (24%), Positives = 82/201 (40%)
Query: 69 TGATNGAVVVWNLGQISRSK-QERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDI 127
TG + V Q+ SK + + ND+ V F + + N ++S + D ++L+D
Sbjct: 155 TGRIEKPIPVVQPSQVPMSKTRPNIRNDNNDCVYDAKFSFHDPNIIMSCNSDSHLQLWDT 214
Query: 128 RCQESTK---IFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR--------RPEKC 176
R + H+ E++ +FN + P+ AS + + WD R RP +
Sbjct: 215 RLPNPLFMDFVAHNGLEAL-SCDFNRYRPFVVASAGVDKLAKVWDTRMIQPNVHSRPPRA 273
Query: 177 FYQFTAHSGPIFACDWHPEH-AWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWR 235
+F H I W P L T S D T++VW+ S PS + + S+
Sbjct: 274 LNKFMGHEFAIRKLAWSPHGPTQLLTCSYDMTVRVWNDS--PSPTSRVGLLDGASQPHAP 331
Query: 236 PQRKFHLASCSLVVDSSVNVW 256
P K A V+ ++W
Sbjct: 332 PCSKIFSAHTEFVMGCDWSLW 352
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 58/257 (22%), Positives = 105/257 (40%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
VAWS ENH+ T + +G V +++ + F +H+R V V + ++ N S
Sbjct: 66 VAWSETNENHVLTSSGDGCVSLFDT--TLKDYPVMKFTEHQREVFSVDWSNIDKNLFCSA 123
Query: 117 SQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNP-HSPYAFASVSENGTIQ-QWDVRRPE 174
S DG+++++ +T + + + R+ + P S+ + + ++R
Sbjct: 124 SWDGSVKVWSPGSNRNTSLLTLRSLASREEKTGRIEKPIPVVQPSQVPMSKTRPNIRNDN 183
Query: 175 K-CFY--QFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI---NTIAS 228
C Y +F+ H I + + + D +++WD + L N + +
Sbjct: 184 NDCVYDAKFSFHDPNI-----------IMSCNSDSHLQLWDTRLPNPLFMDFVAHNGLEA 232
Query: 229 VSRIKWRPQRKFHLASCSLVVDSSVNVWDIR--------RPYIPLASFTEHKDVVSGLAW 280
+S + R F +AS VD VWD R RP L F H+ + LAW
Sbjct: 233 LS-CDFNRYRPFVVASAG--VDKLAKVWDTRMIQPNVHSRPPRALNKFMGHEFAIRKLAW 289
Query: 281 --RGDPQLFIASSRVSI 295
G QL S +++
Sbjct: 290 SPHGPTQLLTCSYDMTV 306
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 172 (65.6 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 63/267 (23%), Positives = 117/267 (43%)
Query: 34 TEFVETHNLRVG-KNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNL-GQISRSKQER 91
T+ V H +R G ++ N + W+ +ATG+ +G +W G ++ +
Sbjct: 262 TQLVLRHCIREGGHDVPSNKDVTSLDWNT-NGTLLATGSYDGFARIWTEDGNLAST---- 316
Query: 92 VFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPH 151
HK + + ++ + N+++S D T ++D E+ + F ++ DV++ +
Sbjct: 317 -LGQHKGPIFALKWNR-KGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNN 374
Query: 152 SPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVW 211
+A S + + RP K F H+ + A W P LA+ S D T+K+W
Sbjct: 375 MTFASCSTDMCIHVCRLGCDRPVKTFQ---GHTNEVNAIKWDPSGMLLASCSDDMTLKIW 431
Query: 212 DLSIKPSLEYSINTIASVSRIKW--------RPQRKFHLASCSLVVDSSVNVWDIRRPYI 263
+ + + + IKW P LAS S DS+V +WDI R +
Sbjct: 432 SMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASF--DSTVRLWDIERG-V 488
Query: 264 PLASFTEHKDVVSGLAWRGDPQLFIAS 290
+ T+H++ V +A+ D + ++AS
Sbjct: 489 CTHTLTKHQEPVYSVAFSPDGR-YLAS 514
Score = 153 (58.9 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 50/214 (23%), Positives = 97/214 (45%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV W A+ +T+ + V LG + + F H VN + + S L++
Sbjct: 368 DVDWQ--NNMTFASCSTDMCIHVCRLGC---DRPVKTFQGHTNEVNAIKWD--PSGMLLA 420
Query: 116 G-SQDGTMRLFDIRCQESTKIFHSNTESVRDVEF--------NPHSPYAFASVSENGTIQ 166
S D T++++ ++ + ++ + + +++ NP+S AS S + T++
Sbjct: 421 SCSDDMTLKIWSMKQEVCIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVR 480
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTI 226
WD+ R C + T H P+++ + P+ +LA+ S DK + +W+ +L +S
Sbjct: 481 LWDIERGV-CTHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQ-SGNLVHSYRGT 538
Query: 227 ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
+ + W + AS S D SV V D+R+
Sbjct: 539 GGIFEVCWNARGDKVGASAS---DGSVCVLDLRK 569
Score = 120 (47.3 bits), Expect = 0.00029, P = 0.00029
Identities = 61/244 (25%), Positives = 105/244 (43%)
Query: 63 EENHIATGATNGAVVVWNLGQIS-RSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGT 121
EEN A N A + G++ S + V H+ V +++ V S+ L SGS D T
Sbjct: 190 EENR-AHSVNNHAKPMEIDGEVDIPSSKATVLRGHESEVFICAWNPV-SDLLASGSGDST 247
Query: 122 MRLFDIRCQE---STKIF--HSNTESVRDVEFNPH--------SPYAFASVSENGTIQQW 168
R++++ ST++ H E DV N + A+ S +G + W
Sbjct: 248 ARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKDVTSLDWNTNGTLLATGSYDGFARIW 307
Query: 169 DVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTIA 227
H GPIFA W+ + ++ +A DKT +WD + ++ ++
Sbjct: 308 T--EDGNLASTLGQHKGPIFALKWNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAP 365
Query: 228 SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQ-L 286
++ + W+ F ASCS D ++V + P+ +F H + V+ + W DP +
Sbjct: 366 ALD-VDWQNNMTF--ASCS--TDMCIHVCRLGCDR-PVKTFQGHTNEVNAIKW--DPSGM 417
Query: 287 FIAS 290
+AS
Sbjct: 418 LLAS 421
>MGI|MGI:1913835 [details] [associations]
symbol:Snrnp40 "small nuclear ribonucleoprotein 40 (U5)"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1913835 GO:GO:0005737
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006397 GO:GO:0071013 HOGENOM:HOG000091644 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 CTD:9410
HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0 EMBL:AK002371 EMBL:AK169605
EMBL:BC058365 IPI:IPI00461621 RefSeq:NP_079921.2 UniGene:Mm.423019
ProteinModelPortal:Q6PE01 SMR:Q6PE01 STRING:Q6PE01
PhosphoSite:Q6PE01 PaxDb:Q6PE01 PRIDE:Q6PE01
Ensembl:ENSMUST00000105994 GeneID:66585 KEGG:mmu:66585
UCSC:uc008uzf.1 InParanoid:Q6PE01 NextBio:322070 Bgee:Q6PE01
Genevestigator:Q6PE01 Uniprot:Q6PE01
Length = 358
Score = 168 (64.2 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 45/187 (24%), Positives = 93/187 (49%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ TG+ +G V +W++ + ++ + N ++ V V+F+ S+ +ISG D ++++D
Sbjct: 168 VCTGSDDGTVKLWDIRK--KAAVQTFQNTYQ--VLAVTFNDT-SDQIISGGIDNDIKVWD 222
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR--RP-EKC--FYQFT 181
+R + T + +SV + + Y ++ +N T++ WDVR P E+C +Q
Sbjct: 223 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVKIFQGN 281
Query: 182 AHSGP--IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRK 239
H+ + C W P+ + +A S D+ + VWD + + L S++ + + P
Sbjct: 282 VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRVLYKLPGHAGSINEVAFHPDEP 341
Query: 240 FHLASCS 246
L++ S
Sbjct: 342 IILSASS 348
Score = 153 (58.9 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 48/200 (24%), Positives = 90/200 (45%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHY-VESNWLISGSQDGTMRLF 125
+A+ + +++WN+ H V + HY + + L S S D T+ ++
Sbjct: 82 LASAGFDRLILLWNV--YGDCDNYATLKGHSGAV--MELHYNTDGSMLFSASTDKTVAVW 137
Query: 126 DIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSG 185
D E K +T V P + S++GT++ WD+R+ K Q ++
Sbjct: 138 DSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK--KAAVQTFQNTY 195
Query: 186 PIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHLAS 244
+ A ++ + + D IKVWDL + L Y++ A SV+ + + + L++
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLLSN 254
Query: 245 CSLVVDSSVNVWDIRRPYIP 264
+D++V VWD+R P+ P
Sbjct: 255 A---MDNTVRVWDVR-PFAP 270
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 37/157 (23%), Positives = 71/157 (45%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
+ I +G + + VW+L Q +K H +V +S E ++L+S + D T+R+
Sbjct: 207 DQIISGGIDNDIKVWDLRQ---NKLTYTMRGHADSVTGLSLSS-EGSYLLSNAMDNTVRV 262
Query: 125 FDIRC----QESTKIFHSNTESVRD----VEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
+D+R + KIF N + ++P A+ S + + WD +
Sbjct: 263 WDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGS-KIAAGSADRFVYVWDTTS-RRV 320
Query: 177 FYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
Y+ H+G I +HP+ + +AS DK + + ++
Sbjct: 321 LYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 171 (65.3 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 54/213 (25%), Positives = 98/213 (46%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV W N A+ +T+ + V LGQ + + F H VN + + N L S
Sbjct: 313 DVDWQ--SNNTFASCSTDMCIHVCKLGQ---DRPIKTFQGHTNEVNAIKWDPT-GNLLAS 366
Query: 116 GSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNP-----HSPYA---FASVSENGTIQQ 167
S D T++++ ++ ++ + + ++++P ++P A AS S + T++
Sbjct: 367 CSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRL 426
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA 227
WDV R C + T H P+++ + P+ +LA+ S DK + +W+ +L +S
Sbjct: 427 WDVDRGI-CIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTG-ALVHSYRGTG 484
Query: 228 SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
+ + W AS S D SV V D+R+
Sbjct: 485 GIFEVCWNAAGDKVGASAS---DGSVCVLDLRK 514
Score = 126 (49.4 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 59/238 (24%), Positives = 103/238 (43%)
Query: 63 EENHIATGATNGAVVVWNLGQIS-RSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGT 121
EEN T A N ++ G + S + V H+ V +++ V S+ L SGS D T
Sbjct: 134 EENGAHTIANNHTDMMEVDGDVEIPSNKAVVLRGHESEVFICAWNPV-SDLLASGSGDST 192
Query: 122 MRLFDIRCQESTK------IFHSNTESVRDVEFNPH--------SPYAFASVSENGTIQQ 167
R++++ + ST + H E +DV N A+ S +G +
Sbjct: 193 ARIWNLS-ENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARI 251
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTI 226
W + H GPIFA W+ + ++ +A DKT +WD + ++ ++
Sbjct: 252 WT--KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSA 309
Query: 227 ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDP 284
++ + W+ F ASCS D ++V + + P+ +F H + V+ + W DP
Sbjct: 310 PALD-VDWQSNNTF--ASCS--TDMCIHVCKLGQDR-PIKTFQGHTNEVNAIKW--DP 359
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 171 (65.3 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 54/213 (25%), Positives = 98/213 (46%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV W N A+ +T+ + V LGQ + + F H VN + + N L S
Sbjct: 313 DVDWQ--SNNTFASCSTDMCIHVCKLGQ---DRPIKTFQGHTNEVNAIKWDPT-GNLLAS 366
Query: 116 GSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNP-----HSPYA---FASVSENGTIQQ 167
S D T++++ ++ ++ + + ++++P ++P A AS S + T++
Sbjct: 367 CSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRL 426
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA 227
WDV R C + T H P+++ + P+ +LA+ S DK + +W+ +L +S
Sbjct: 427 WDVDRGI-CIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTG-ALVHSYRGTG 484
Query: 228 SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
+ + W AS S D SV V D+R+
Sbjct: 485 GIFEVCWNAAGDKVGASAS---DGSVCVLDLRK 514
Score = 124 (48.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 58/237 (24%), Positives = 102/237 (43%)
Query: 63 EENHIATGATNGAVVVWNLGQISRSKQERV-FNDHKRTVNKVSFHYVESNWLISGSQDGT 121
EEN T A N ++ G + + V H+ V +++ V S+ L SGS D T
Sbjct: 134 EENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV-SDLLASGSGDST 192
Query: 122 MRLFDIR---CQESTKIF--HSNTESVRDVEFNPH--------SPYAFASVSENGTIQQW 168
R++++ ST++ H E +DV N A+ S +G + W
Sbjct: 193 ARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW 252
Query: 169 DVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTIA 227
+ H GPIFA W+ + ++ +A DKT +WD + ++ ++
Sbjct: 253 T--KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAP 310
Query: 228 SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDP 284
++ + W+ F ASCS D ++V + + P+ +F H + V+ + W DP
Sbjct: 311 ALD-VDWQSNNTF--ASCS--TDMCIHVCKLGQDR-PIKTFQGHTNEVNAIKW--DP 359
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 171 (65.3 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 54/213 (25%), Positives = 98/213 (46%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV W N A+ +T+ + V LGQ + + F H VN + + N L S
Sbjct: 313 DVDWQ--SNNTFASCSTDMCIHVCKLGQ---DRPIKTFQGHTNEVNAIKWDPT-GNLLAS 366
Query: 116 GSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNP-----HSPYA---FASVSENGTIQQ 167
S D T++++ ++ ++ + + ++++P ++P A AS S + T++
Sbjct: 367 CSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRL 426
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA 227
WDV R C + T H P+++ + P+ +LA+ S DK + +W+ +L +S
Sbjct: 427 WDVDRGI-CIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTG-ALVHSYRGTG 484
Query: 228 SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
+ + W AS S D SV V D+R+
Sbjct: 485 GIFEVCWNAAGDKVGASAS---DGSVCVLDLRK 514
Score = 124 (48.7 bits), Expect = 8.9e-05, P = 8.9e-05
Identities = 58/237 (24%), Positives = 102/237 (43%)
Query: 63 EENHIATGATNGAVVVWNLGQISRSKQERV-FNDHKRTVNKVSFHYVESNWLISGSQDGT 121
EEN T A N ++ G + + V H+ V +++ V S+ L SGS D T
Sbjct: 134 EENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV-SDLLASGSGDST 192
Query: 122 MRLFDIR---CQESTKIF--HSNTESVRDVEFNPH--------SPYAFASVSENGTIQQW 168
R++++ ST++ H E +DV N A+ S +G + W
Sbjct: 193 ARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW 252
Query: 169 DVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTIA 227
+ H GPIFA W+ + ++ +A DKT +WD + ++ ++
Sbjct: 253 T--KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAP 310
Query: 228 SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDP 284
++ + W+ F ASCS D ++V + + P+ +F H + V+ + W DP
Sbjct: 311 ALD-VDWQSNNTF--ASCS--TDMCIHVCKLGQDR-PIKTFQGHTNEVNAIKW--DP 359
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 171 (65.3 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 54/213 (25%), Positives = 98/213 (46%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV W N A+ +T+ + V LGQ + + F H VN + + N L S
Sbjct: 313 DVDWQ--SNNTFASCSTDMCIHVCKLGQ---DRPIKTFQGHTNEVNAIKWDPT-GNLLAS 366
Query: 116 GSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNP-----HSPYA---FASVSENGTIQQ 167
S D T++++ ++ ++ + + ++++P ++P A AS S + T++
Sbjct: 367 CSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRL 426
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA 227
WDV R C + T H P+++ + P+ +LA+ S DK + +W+ +L +S
Sbjct: 427 WDVDRGI-CIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTG-ALVHSYRGTG 484
Query: 228 SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
+ + W AS S D SV V D+R+
Sbjct: 485 GIFEVCWNAAGDKVGASAS---DGSVCVLDLRK 514
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 58/238 (24%), Positives = 102/238 (42%)
Query: 63 EENHIATGATNGAVVVWNLGQISRSKQERV-FNDHKRTVNKVSFHYVESNWLISGSQDGT 121
EEN T A N ++ G + + V H+ V +++ V S+ L SGS D T
Sbjct: 134 EENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV-SDLLASGSGDST 192
Query: 122 MRLFDIRCQESTK------IFHSNTESVRDVEFNPH--------SPYAFASVSENGTIQQ 167
R++++ + ST + H E +DV N A+ S +G +
Sbjct: 193 ARIWNLS-ENSTSGPTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARI 251
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSI-KPSLEYSINTI 226
W + H GPIFA W+ + ++ +A DKT +WD + ++ ++
Sbjct: 252 WT--KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSA 309
Query: 227 ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDP 284
++ + W+ F ASCS D ++V + + P+ +F H + V+ + W DP
Sbjct: 310 PALD-VDWQSNNTF--ASCS--TDMCIHVCKLGQDR-PIKTFQGHTNEVNAIKW--DP 359
>UNIPROTKB|O93277 [details] [associations]
symbol:WDR1 "WD repeat-containing protein 1" species:9031
"Gallus gallus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AF020054 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000162559 HOVERGEN:HBG000780 CTD:9948 IPI:IPI00581678
RefSeq:NP_001004402.1 UniGene:Gga.2409 ProteinModelPortal:O93277
STRING:O93277 PRIDE:O93277 GeneID:422842 KEGG:gga:422842
NextBio:20825413 Uniprot:O93277
Length = 609
Score = 172 (65.6 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 65/231 (28%), Positives = 93/231 (40%)
Query: 56 DVAWSCIEENHIATGATN---GAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNW 112
D+AW+ + G GAV +W+ G S E H + +N V
Sbjct: 109 DLAWTEDSKRIAVVGEGREKFGAVFLWDSGS---SVGE--ITGHNKVINSVDIKQTRPYR 163
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR 172
L +GS D F+ + +T V V F+P FA+ S +G I +D +
Sbjct: 164 LATGSDDNCAAFFEGPPFKFKFTLSDHTRFVNCVRFSPDGN-RFATASADGQIFIYDGKT 222
Query: 173 PEK-CFYQF-TAHSGPIFACDWHPEHAWLATASRDKTIKVWDL---SIKPSLEYSINTIA 227
EK C AH G I+A W P+ + L +AS DKT K+WD+ S+ + N +
Sbjct: 223 GEKVCALGGGKAHDGGIYAISWSPDSSQLLSASGDKTAKIWDVGANSVVSTFNMGSNVLD 282
Query: 228 SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGL 278
W+ K HL S SL +N D P PL H + L
Sbjct: 283 QQLGCLWQ---KDHLLSLSL--SGYINYLDKNNPDKPLRVIKGHSKSIQCL 328
>UNIPROTKB|E1BHK9 [details] [associations]
symbol:E1BHK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0033276 "transcription factor TFTC complex" evidence=IEA]
[GO:0030914 "STAGA complex" evidence=IEA] [GO:0004402 "histone
acetyltransferase activity" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR007582
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04494 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00700000104377 EMBL:DAAA02074871 IPI:IPI00726849
ProteinModelPortal:E1BHK9 Ensembl:ENSBTAT00000028149 OMA:RTATERK
Uniprot:E1BHK9
Length = 586
Score = 159 (61.0 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 55/219 (25%), Positives = 98/219 (44%)
Query: 86 RSKQER-VFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVR 144
R+ ER V H V F +S+ L+S S+D ++R +D+ +T ++ + V
Sbjct: 327 RTATERKVLLGHCGPVYSTRF-LPDSSALLSCSEDTSIRYWDLESFTNTVLYQGHAYPVW 385
Query: 145 DVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASR 204
D++ +PHS + FAS S + T + W R + H + +HP +LAT S
Sbjct: 386 DLDISPHSLF-FASASYDHTARLWSFDRTYPLRI-YAGHLAGVDCVKFHPNSNYLATGST 443
Query: 205 DKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIP 264
DKT+++W S+ V + + P ++ L S D + +WD+ +
Sbjct: 444 DKTVRLWSAQQGNSVRLFTGHCGPVRCLAFSPNGQY-LVSAG--EDQLLKLWDLASGTL- 499
Query: 265 LASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIK 303
H D ++ + + D + IAS+ + R +IK
Sbjct: 500 YKDLHGHTDDITSVTFSLDSSV-IASASMDNSVRIWDIK 537
Score = 154 (59.3 bits), Expect = 4.8e-08, P = 4.8e-08
Identities = 37/136 (27%), Positives = 69/136 (50%)
Query: 81 LGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNT 140
L R+ R++ H V+ V FH SN+L +GS D T+RL+ + S ++F +
Sbjct: 407 LWSFDRTYPLRIYAGHLAGVDCVKFH-PNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHC 465
Query: 141 ESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLA 200
VR + F+P+ Y S E+ ++ WD+ + H+ I + + + + +A
Sbjct: 466 GPVRCLAFSPNGQY-LVSAGEDQLLKLWDLASGT-LYKDLHGHTDDITSVTFSLDSSVIA 523
Query: 201 TASRDKTIKVWDLSIK 216
+AS D ++++WD+ K
Sbjct: 524 SASMDNSVRIWDIKSK 539
Score = 122 (48.0 bits), Expect = 0.00018, P = 0.00018
Identities = 29/107 (27%), Positives = 55/107 (51%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
N++ATG+T+ V +W+ Q R+F H V ++F +L+S +D ++L
Sbjct: 436 NYLATGSTDKTVRLWSAQQ---GNSVRLFTGHCGPVRCLAFS-PNGQYLVSAGEDQLLKL 491
Query: 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR 171
+D+ K H +T+ + V F+ S AS S + +++ WD++
Sbjct: 492 WDLASGTLYKDLHGHTDDITSVTFSLDSS-VIASASMDNSVRIWDIK 537
Score = 55 (24.4 bits), Expect = 4.8e-10, Sum P(2) = 4.8e-10
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVN 101
+ATG N ++ +W+L +SK ++ H +N
Sbjct: 283 LATGLNNSSIKLWSLTSKFKSKPHQIDVSHIHLIN 317
>TAIR|locus:2117169 [details] [associations]
symbol:AT4G18900 "AT4G18900" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 KO:K14791 IPI:IPI00537780
RefSeq:NP_567565.1 UniGene:At.50695 ProteinModelPortal:F4JSB9
SMR:F4JSB9 PRIDE:F4JSB9 EnsemblPlants:AT4G18900.1 GeneID:827624
KEGG:ath:AT4G18900 OMA:GFDVRQA PhylomeDB:F4JSB9 Uniprot:F4JSB9
Length = 461
Score = 170 (64.9 bits), Expect = 4.9e-10, P = 4.9e-10
Identities = 59/214 (27%), Positives = 101/214 (47%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
+AW+ N +A+ + + V VW+ ++ + H + V V++++ L+SG
Sbjct: 239 LAWNKEFRNILASASADKKVKVWD---VATGTCKITMEHHTKEVQAVAWNHYAPEVLLSG 295
Query: 117 SQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
S D T+ L D R + S V + ++PHS ++F E+GT++ +DVR+
Sbjct: 296 SFDQTVVLKDGRQPSHSGFKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGFDVRQASIS 355
Query: 177 FYQFTAHSGPIFACDWHPEHAW-----------LATASRDKTIKVWDLSI-KPSLEYSIN 224
+ S P F + H E A LAT S+D+T+K+WDLS +PS + N
Sbjct: 356 ----ASESNPSFTINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHN 411
Query: 225 TIAS-VSRIKWRPQRKFHLASCSLVVDSSVNVWD 257
A + I + P F LA ++ + +WD
Sbjct: 412 PNAGGLFFIAFSPDNPFLLAMGGVM--GELKLWD 443
>CGD|CAL0005164 [details] [associations]
symbol:SOF1 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030686 "90S preribosome"
evidence=IEA] [GO:0032040 "small-subunit processome" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005819 "spindle"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005164 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HOGENOM:HOG000210082 KO:K11806
InterPro:IPR007287 Pfam:PF04158 EMBL:AACQ01000051 EMBL:AACQ01000050
RefSeq:XP_717685.1 RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9
STRING:Q5A7Q9 GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 169 (64.5 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 51/188 (27%), Positives = 88/188 (46%)
Query: 72 TNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQE 131
T GA + L ++RSK + V V F+ E+N + S D ++ L+DIR
Sbjct: 196 TGGATI--QLWDVNRSKHISDLSWGADNVGTVKFNQTETNIIASSGSDNSIVLYDIRT-- 251
Query: 132 STKIFHSNTESVRD--VEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFA 189
+T + H S+R+ + +NP + FA+ +E+ +D+R +K + H G I
Sbjct: 252 NTPV-HKVVTSLRNNCITWNPMEAFNFATGNEDHNGYLYDMRNLQKTLKVYKGHVGAIMD 310
Query: 190 CDWHPEHAWLATASRDKTIKVWD-LSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLV 248
D+ P L T S DKTI++W L + Y + V +K+ K+ ++
Sbjct: 311 VDFAPTGQELVTGSYDKTIRLWKTLDGRSKDVYHTKRMQKVFSVKYSTDSKYIISGSD-- 368
Query: 249 VDSSVNVW 256
D+++ VW
Sbjct: 369 -DTNLRVW 375
>UNIPROTKB|Q5A7Q9 [details] [associations]
symbol:SOF1 "Putative uncharacterized protein SOF1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0005164 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000210082 KO:K11806 InterPro:IPR007287 Pfam:PF04158
EMBL:AACQ01000051 EMBL:AACQ01000050 RefSeq:XP_717685.1
RefSeq:XP_717779.1 ProteinModelPortal:Q5A7Q9 STRING:Q5A7Q9
GeneID:3640585 GeneID:3640619 KEGG:cal:CaO19.12862
KEGG:cal:CaO19.5407 Uniprot:Q5A7Q9
Length = 436
Score = 169 (64.5 bits), Expect = 5.6e-10, P = 5.6e-10
Identities = 51/188 (27%), Positives = 88/188 (46%)
Query: 72 TNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQE 131
T GA + L ++RSK + V V F+ E+N + S D ++ L+DIR
Sbjct: 196 TGGATI--QLWDVNRSKHISDLSWGADNVGTVKFNQTETNIIASSGSDNSIVLYDIRT-- 251
Query: 132 STKIFHSNTESVRD--VEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFA 189
+T + H S+R+ + +NP + FA+ +E+ +D+R +K + H G I
Sbjct: 252 NTPV-HKVVTSLRNNCITWNPMEAFNFATGNEDHNGYLYDMRNLQKTLKVYKGHVGAIMD 310
Query: 190 CDWHPEHAWLATASRDKTIKVWD-LSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLV 248
D+ P L T S DKTI++W L + Y + V +K+ K+ ++
Sbjct: 311 VDFAPTGQELVTGSYDKTIRLWKTLDGRSKDVYHTKRMQKVFSVKYSTDSKYIISGSD-- 368
Query: 249 VDSSVNVW 256
D+++ VW
Sbjct: 369 -DTNLRVW 375
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 170 (64.9 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 53/213 (24%), Positives = 95/213 (44%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
DV W N A+ +T+ + V LGQ + + F H VN + + N L S
Sbjct: 313 DVDWQ--SNNTFASCSTDMCIHVCKLGQ---DRPIKTFQGHTNEVNAIKWDPT-GNLLAS 366
Query: 116 GSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSP--------YAFASVSENGTIQQ 167
S D T++++ ++ ++ + + ++++P P AS S + T++
Sbjct: 367 CSDDMTLKIWSMKQDNCVHDLQAHNKEIYTIKWSPTGPGTSNPNANLMLASASFDSTVRL 426
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA 227
WDV R C + T H P+++ + P+ +LA+ S DK + +W+ +L +S
Sbjct: 427 WDVDRGI-CIHTLTKHQEPVYSVAFSPDGRYLASGSFDKCVHIWNTQTG-ALVHSYRGTG 484
Query: 228 SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
+ + W AS S D SV V D+R+
Sbjct: 485 GIFEVCWNAAGDKVGASAS---DGSVCVLDLRK 514
Score = 122 (48.0 bits), Expect = 0.00015, P = 0.00015
Identities = 59/236 (25%), Positives = 98/236 (41%)
Query: 63 EENHIATGATNGAVVVWNLGQISRSKQERV-FNDHKRTVNKVSFHYVESNWLISGSQDGT 121
EEN T A N ++ G + + V H+ V +++ V S+ L SGS D T
Sbjct: 134 EENGAHTIANNHTDMMEVDGDVEIPPNKAVVLRGHESEVFICAWNPV-SDLLASGSGDST 192
Query: 122 MRLFDIR---CQESTKIF--HSNTESVRDVEFNPH--------SPYAFASVSENGTIQQW 168
R++++ ST++ H E +DV N A+ S +G + W
Sbjct: 193 ARIWNLSENSTSGSTQLVLRHCIREGGQDVPSNKDVTSLDWNSEGTLLATGSYDGFARIW 252
Query: 169 DVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIAS 228
+ H GPIFA W+ + ++ +A DKT +WD + + A
Sbjct: 253 T--KDGNLASTLGQHKGPIFALKWNKKGNFILSAGVDKTTIIWDAHTGEAKQLFPFHSAP 310
Query: 229 VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDP 284
+ W+ F ASCS D ++V + + P+ +F H + V+ + W DP
Sbjct: 311 ALDVDWQSNNTF--ASCS--TDMCIHVCKLGQDR-PIKTFQGHTNEVNAIKW--DP 359
>UNIPROTKB|F1MLP7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
OMA:HAGSVNE GeneTree:ENSGT00690000101787 IPI:IPI00687479
UniGene:Bt.59135 EMBL:DAAA02006263 ProteinModelPortal:F1MLP7
Ensembl:ENSBTAT00000022372 Uniprot:F1MLP7
Length = 358
Score = 167 (63.8 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 45/187 (24%), Positives = 93/187 (49%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ TG+ +G V +W++ + ++ + N ++ V V+F+ S+ +ISG D ++++D
Sbjct: 168 VCTGSDDGTVKLWDIRK--KAAIQTFQNTYQ--VLAVTFNDT-SDQIISGGIDNDIKVWD 222
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR--RP-EKC--FYQFT 181
+R + T + +SV + + Y ++ +N T++ WDVR P E+C +Q
Sbjct: 223 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVKIFQGN 281
Query: 182 AHSGP--IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRK 239
H+ + C W P+ + +A S D+ + VWD + + L S++ + + P
Sbjct: 282 VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEP 341
Query: 240 FHLASCS 246
L++ S
Sbjct: 342 IILSASS 348
Score = 153 (58.9 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 48/200 (24%), Positives = 90/200 (45%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHY-VESNWLISGSQDGTMRLF 125
+A+ + +++WN+ H V + HY + + L S S D T+ ++
Sbjct: 82 LASAGFDRLILLWNV--YGDCDNYATLKGHSGAV--MELHYNTDGSMLFSASTDKTVAVW 137
Query: 126 DIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSG 185
D E K +T V P + S++GT++ WD+R+ K Q ++
Sbjct: 138 DSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK--KAAIQTFQNTY 195
Query: 186 PIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHLAS 244
+ A ++ + + D IKVWDL + L Y++ A SV+ + + + L++
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLLSN 254
Query: 245 CSLVVDSSVNVWDIRRPYIP 264
+D++V VWD+R P+ P
Sbjct: 255 A---MDNTVRVWDVR-PFAP 270
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 37/157 (23%), Positives = 71/157 (45%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
+ I +G + + VW+L Q +K H +V +S E ++L+S + D T+R+
Sbjct: 207 DQIISGGIDNDIKVWDLRQ---NKLTYTMRGHADSVTGLSLSS-EGSYLLSNAMDNTVRV 262
Query: 125 FDIRC----QESTKIFHSNTESVRD----VEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
+D+R + KIF N + ++P A+ S + + WD +
Sbjct: 263 WDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGS-KIAAGSADRFVYVWDTTS-RRI 320
Query: 177 FYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
Y+ H+G I +HP+ + +AS DK + + ++
Sbjct: 321 LYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
>UNIPROTKB|F1SVA6 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 KO:K12857
OMA:HAGSVNE GeneTree:ENSGT00690000101787 EMBL:FP565415
RefSeq:XP_003356314.1 ProteinModelPortal:F1SVA6
Ensembl:ENSSSCT00000003991 GeneID:100624754 KEGG:ssc:100624754
Uniprot:F1SVA6
Length = 358
Score = 167 (63.8 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 45/187 (24%), Positives = 93/187 (49%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ TG+ +G V +W++ + ++ + N ++ V V+F+ S+ +ISG D ++++D
Sbjct: 168 VCTGSDDGTVKLWDIRK--KAAIQTFQNTYQ--VLAVTFNDT-SDQIISGGIDNDIKVWD 222
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR--RP-EKC--FYQFT 181
+R + T + +SV + + Y ++ +N T++ WDVR P E+C +Q
Sbjct: 223 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVKIFQGN 281
Query: 182 AHSGP--IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRK 239
H+ + C W P+ + +A S D+ + VWD + + L S++ + + P
Sbjct: 282 VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEP 341
Query: 240 FHLASCS 246
L++ S
Sbjct: 342 IILSASS 348
Score = 153 (58.9 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 48/200 (24%), Positives = 90/200 (45%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHY-VESNWLISGSQDGTMRLF 125
+A+ + +++WN+ H V + HY + + L S S D T+ ++
Sbjct: 82 LASAGFDRLILLWNV--YGDCDNYATLKGHSGAV--MELHYNTDGSMLFSASTDKTVAVW 137
Query: 126 DIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSG 185
D E K +T V P + S++GT++ WD+R+ K Q ++
Sbjct: 138 DSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK--KAAIQTFQNTY 195
Query: 186 PIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHLAS 244
+ A ++ + + D IKVWDL + L Y++ A SV+ + + + L++
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLLSN 254
Query: 245 CSLVVDSSVNVWDIRRPYIP 264
+D++V VWD+R P+ P
Sbjct: 255 A---MDNTVRVWDVR-PFAP 270
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 37/157 (23%), Positives = 71/157 (45%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
+ I +G + + VW+L Q +K H +V +S E ++L+S + D T+R+
Sbjct: 207 DQIISGGIDNDIKVWDLRQ---NKLTYTMRGHADSVTGLSLSS-EGSYLLSNAMDNTVRV 262
Query: 125 FDIRC----QESTKIFHSNTESVRD----VEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
+D+R + KIF N + ++P A+ S + + WD +
Sbjct: 263 WDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGS-KIAAGSADRFVYVWDTTS-RRI 320
Query: 177 FYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
Y+ H+G I +HP+ + +AS DK + + ++
Sbjct: 321 LYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
>UNIPROTKB|Q2HJH6 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9913 "Bos taurus" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681
HOGENOM:HOG000091644 KO:K12857 EMBL:BC105383 IPI:IPI00687479
RefSeq:NP_001039847.1 UniGene:Bt.59135 ProteinModelPortal:Q2HJH6
STRING:Q2HJH6 PRIDE:Q2HJH6 GeneID:534645 KEGG:bta:534645 CTD:9410
HOVERGEN:HBG105197 InParanoid:Q2HJH6 OrthoDB:EOG4JM7Q0
NextBio:20876486 Uniprot:Q2HJH6
Length = 358
Score = 167 (63.8 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 45/187 (24%), Positives = 93/187 (49%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ TG+ +G V +W++ + ++ + N ++ V V+F+ S+ +ISG D ++++D
Sbjct: 168 VCTGSDDGTVKLWDIRK--KAAIQTFQNTYQ--VLAVTFNDT-SDQIISGGIDNDIKVWD 222
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR--RP-EKC--FYQFT 181
+R + T + +SV + + Y ++ +N T++ WDVR P E+C +Q
Sbjct: 223 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVRIFQGN 281
Query: 182 AHSGP--IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRK 239
H+ + C W P+ + +A S D+ + VWD + + L S++ + + P
Sbjct: 282 VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEP 341
Query: 240 FHLASCS 246
L++ S
Sbjct: 342 IILSASS 348
Score = 153 (58.9 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 48/200 (24%), Positives = 90/200 (45%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHY-VESNWLISGSQDGTMRLF 125
+A+ + +++WN+ H V + HY + + L S S D T+ ++
Sbjct: 82 LASAGFDRLILLWNV--YGDCDNYATLKGHSGAV--MELHYNTDGSMLFSASTDKTVAVW 137
Query: 126 DIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSG 185
D E K +T V P + S++GT++ WD+R+ K Q ++
Sbjct: 138 DSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK--KAAIQTFQNTY 195
Query: 186 PIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHLAS 244
+ A ++ + + D IKVWDL + L Y++ A SV+ + + + L++
Sbjct: 196 QVLAVTFNDTSDQIISGGIDNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLLSN 254
Query: 245 CSLVVDSSVNVWDIRRPYIP 264
+D++V VWD+R P+ P
Sbjct: 255 A---MDNTVRVWDVR-PFAP 270
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 36/157 (22%), Positives = 71/157 (45%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
+ I +G + + VW+L Q +K H +V +S E ++L+S + D T+R+
Sbjct: 207 DQIISGGIDNDIKVWDLRQ---NKLTYTMRGHADSVTGLSLSS-EGSYLLSNAMDNTVRV 262
Query: 125 FDIRC----QESTKIFHSNTESVRD----VEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
+D+R + +IF N + ++P A+ S + + WD +
Sbjct: 263 WDVRPFAPKERCVRIFQGNVHNFEKNLLRCSWSPDGS-KIAAGSADRFVYVWDTTS-RRI 320
Query: 177 FYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
Y+ H+G I +HP+ + +AS DK + + ++
Sbjct: 321 LYKLPGHAGSINEVAFHPDEPIILSASSDKRLYMGEI 357
>UNIPROTKB|F1NUK8 [details] [associations]
symbol:SNRNP40 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013 OMA:HAGSVNE
GeneTree:ENSGT00690000101787 EMBL:AADN02051366 EMBL:AADN02051367
EMBL:AADN02051368 EMBL:AADN02051369 EMBL:AADN02051370
EMBL:AADN02051371 EMBL:AADN02051372 EMBL:AADN02051373
IPI:IPI00593723 Ensembl:ENSGALT00000041219 ArrayExpress:F1NUK8
Uniprot:F1NUK8
Length = 384
Score = 167 (63.8 bits), Expect = 7.2e-10, P = 7.2e-10
Identities = 46/187 (24%), Positives = 94/187 (50%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ TG+ +G V +W++ + ++ + N ++ V V+F+ S+ +ISG D ++++D
Sbjct: 194 VCTGSDDGTVKLWDIRK--KAAVQTFQNTYQ--VLAVTFNDT-SDQIISGGIDNDIKVWD 248
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR--RP-EKC--FYQFT 181
+R + T + +SV + + Y ++ +N T++ WDVR P E+C +Q
Sbjct: 249 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN-TVRIWDVRPFAPKERCVKIFQGN 307
Query: 182 AHSGP--IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRK 239
H+ + C W P+ + +A S D+ + VWD + + L SV+ + + P+
Sbjct: 308 VHNFEKNLLRCSWSPDGSKIAGGSADRFVYVWDTTSRRILYKLPGHAGSVNELAFHPEEP 367
Query: 240 FHLASCS 246
L++ S
Sbjct: 368 IILSASS 374
Score = 156 (60.0 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 48/202 (23%), Positives = 91/202 (45%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHY-VESNWLISGSQDGTMR 123
N +A+ + +++WN+ H V + HY + + L S S D T+
Sbjct: 106 NTLASAGFDRLILLWNV--YGDCDNYATLKGHSGAV--MELHYNTDGSMLFSASTDKTVA 161
Query: 124 LFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAH 183
++D E K +T V P + S++GT++ WD+R+ K Q +
Sbjct: 162 VWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK--KAAVQTFQN 219
Query: 184 SGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHL 242
+ + A ++ + + D IKVWDL + L Y++ A SV+ + + + L
Sbjct: 220 TYQVLAVTFNDTSDQIISGGIDNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLL 278
Query: 243 ASCSLVVDSSVNVWDIRRPYIP 264
++ +D++V +WD+R P+ P
Sbjct: 279 SNA---MDNTVRIWDVR-PFAP 296
Score = 122 (48.0 bits), Expect = 9.3e-05, P = 9.3e-05
Identities = 37/157 (23%), Positives = 70/157 (44%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
+ I +G + + VW+L Q +K H +V +S E ++L+S + D T+R+
Sbjct: 233 DQIISGGIDNDIKVWDLRQ---NKLTYTMRGHADSVTGLSLSS-EGSYLLSNAMDNTVRI 288
Query: 125 FDIRC----QESTKIFHSNTESVRD----VEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
+D+R + KIF N + ++P A S + + WD +
Sbjct: 289 WDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGS-KIAGGSADRFVYVWDTTS-RRI 346
Query: 177 FYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
Y+ H+G + +HPE + +AS DK + + ++
Sbjct: 347 LYKLPGHAGSVNELAFHPEEPIILSASSDKRLYMGEI 383
>WB|WBGene00010685 [details] [associations]
symbol:aipl-1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0007015 "actin
filament organization" evidence=IGI] [GO:0032880 "regulation of
protein localization" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0007015 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000003 GO:GO:0032880
GeneTree:ENSGT00390000009416 HOGENOM:HOG000162559 OMA:LKDQKKC
HSSP:Q11176 EMBL:Z81099 PIR:T23497 RefSeq:NP_506733.1
ProteinModelPortal:O17939 SMR:O17939 STRING:O17939 PaxDb:O17939
EnsemblMetazoa:K08F9.2.1 EnsemblMetazoa:K08F9.2.2 GeneID:180022
KEGG:cel:CELE_K08F9.2 UCSC:K08F9.2.1 CTD:180022 WormBase:K08F9.2
InParanoid:O17939 NextBio:907784 Uniprot:O17939
Length = 600
Score = 170 (64.9 bits), Expect = 7.8e-10, P = 7.8e-10
Identities = 49/172 (28%), Positives = 81/172 (47%)
Query: 56 DVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
D+AW + A G G ++ + + RT+N V F +IS
Sbjct: 108 DIAWDSESKRIAAVG--EGKERFGHVFLLDTTTSNGSLTGQSRTMNSVDFKPTRPFRIIS 165
Query: 116 GSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEK 175
GS D T+ +F+ + F + + V+ +N + FAS +GT+ ++ EK
Sbjct: 166 GSDDNTVAIFEGPPFKFKHTFDHHKKFVQSTRYN-NDGSLFASTGSDGTVVLYNGVDGEK 224
Query: 176 CFY----QFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI 223
+ AH+G IFA W P+ + +ATAS DK++K+WD+S + LE +I
Sbjct: 225 VGVLEDAKGVAHTGSIFALAWSPDQSRIATASADKSVKIWDVSAR-KLERTI 275
>ASPGD|ASPL0000041012 [details] [associations]
symbol:AN9085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001306
HOGENOM:HOG000091644 OMA:HAGSVNE ProteinModelPortal:C8VH61
EnsemblFungi:CADANIAT00009529 Uniprot:C8VH61
Length = 359
Score = 166 (63.5 bits), Expect = 7.9e-10, P = 7.9e-10
Identities = 50/200 (25%), Positives = 95/200 (47%)
Query: 66 HIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLF 125
HIA+G+ + ++++WN + + + + HK + + + +S + S S D T+ +
Sbjct: 80 HIASGSMDRSILLWNT--YGQCENYGILSGHKGAILDLQWSR-DSKTIFSASADMTLASW 136
Query: 126 DIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSG 185
DI + + + + E + VE + S S++GT+ WD R+ E Y T
Sbjct: 137 DIESGQRIRRYIGHEEVINSVEISKRGQEMLVSASDDGTMGIWDPRQKEAIDYLETEL-- 194
Query: 186 PIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI-NTIASVSRIKWRPQRKFHLAS 244
PI A + + D I VWD+ K ++ YS+ + +++ ++ P + L++
Sbjct: 195 PITAVAQSEAGNEVFSGGIDNAIHVWDIR-KKAIVYSMAGHMDTITSLEVSPDSQTLLSN 253
Query: 245 CSLVVDSSVNVWDIRRPYIP 264
DS+V WDIR P+ P
Sbjct: 254 S---FDSTVRTWDIR-PFAP 269
>UNIPROTKB|B3KVK2 [details] [associations]
symbol:GNB1 "cDNA FLJ16663 fis, clone THYMU2005759, highly
similar to Guanine nucleotide-binding proteinG(I)/G(S)/G(T) subunit
beta 1" species:9606 "Homo sapiens" [GO:0001917 "photoreceptor
inner segment" evidence=IEA] [GO:0005834 "heterotrimeric G-protein
complex" evidence=IEA] [GO:0007200 "phospholipase C-activating
G-protein coupled receptor signaling pathway" evidence=IEA]
[GO:0007204 "elevation of cytosolic calcium ion concentration"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0010659 "cardiac muscle cell apoptotic process" evidence=IEA]
[GO:0030425 "dendrite" evidence=IEA] [GO:0042622 "photoreceptor
outer segment membrane" evidence=IEA] [GO:0044297 "cell body"
evidence=IEA] [GO:0050909 "sensory perception of taste"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0071456 "cellular response to hypoxia"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0060041 GO:GO:0007204 GO:GO:0007200 GO:GO:0001750
EMBL:AL109917 EMBL:AL031282 GO:GO:0050909 GO:GO:0005834
HOVERGEN:HBG000188 UniGene:Hs.430425 HGNC:HGNC:4396 ChiTaRS:GNB1
EMBL:AK122949 IPI:IPI00642117 ProteinModelPortal:B3KVK2 SMR:B3KVK2
STRING:B3KVK2 PRIDE:B3KVK2 Ensembl:ENST00000455156
OrthoDB:EOG4GHZR3 ArrayExpress:B3KVK2 Bgee:B3KVK2 Uniprot:B3KVK2
Length = 240
Score = 159 (61.0 bits), Expect = 8.6e-10, P = 8.6e-10
Identities = 53/196 (27%), Positives = 86/196 (43%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSF-HYVESNWLISGSQDGTMR 123
N++A G + ++NL +R RV + +S +++ N +++ S D T
Sbjct: 10 NYVACGGLDNICSIYNLK--TREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCA 67
Query: 124 LFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAH 183
L+DI + T F +T V + P + F S + + + + WDVR C FT H
Sbjct: 68 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRL-FVSGACDASAKLWDVREG-MCRQTFTGH 125
Query: 184 SGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSL-EYSI-NTIASVSRIKWRPQRKFH 241
I A + P AT S D T +++DL L YS N I ++ + + +
Sbjct: 126 ESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLL 185
Query: 242 LASCSLVVDSSVNVWD 257
LA D + NVWD
Sbjct: 186 LAGYD---DFNCNVWD 198
Score = 112 (44.5 bits), Expect = 0.00047, P = 0.00047
Identities = 35/147 (23%), Positives = 62/147 (42%)
Query: 69 TGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR 128
+GA + + +W++ + +Q F H+ +N + F + N +GS D T RLFD+R
Sbjct: 101 SGACDASAKLWDVRE-GMCRQ--TFTGHESDINAICF-FPNGNAFATGSDDATCRLFDLR 156
Query: 129 C-QESTKIFHSNTE-SVRDVEFNPHSPYAFASVSE-NGTIQQWDVRRPEKCFYQFTAHSG 185
QE H N + V F+ A + N + WD + ++ H
Sbjct: 157 ADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNV--WDALKADRAGV-LAGHDN 213
Query: 186 PIFACDWHPEHAWLATASRDKTIKVWD 212
+ + +AT S D +K+W+
Sbjct: 214 RVSCLGVTDDGMAVATGSWDSFLKIWN 240
>FB|FBgn0030365 [details] [associations]
symbol:Tango4 "Transport and Golgi organization 4"
species:7227 "Drosophila melanogaster" [GO:0003674
"molecular_function" evidence=ND] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:AE014298 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0009306 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 GO:GO:0007030 HSSP:P16649
GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK EMBL:AY051707
RefSeq:NP_572778.1 UniGene:Dm.4503 SMR:Q9VYQ9 MINT:MINT-757865
STRING:Q9VYQ9 EnsemblMetazoa:FBtr0073622 GeneID:32168
KEGG:dme:Dmel_CG1796 UCSC:CG1796-RA CTD:32168 FlyBase:FBgn0030365
InParanoid:Q9VYQ9 OrthoDB:EOG4C2FRR GenomeRNAi:32168 NextBio:777227
Uniprot:Q9VYQ9
Length = 482
Score = 168 (64.2 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 53/207 (25%), Positives = 93/207 (44%)
Query: 88 KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVE 147
K RV + H V ++ + W +G+ D ++++D+ + + +VR V
Sbjct: 163 KLSRVISGHLGWVRCIAVE-PGNEWFATGAGDRVIKIWDLASGKLKLSLTGHVSTVRGVA 221
Query: 148 FNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKT 207
+ PY F S E+ ++ WD+ K + H +++ HP LAT+ RD T
Sbjct: 222 VSTKHPYLF-SCGEDRQVKCWDLEY-NKVIRHYHGHLSAVYSLALHPTIDVLATSGRDST 279
Query: 208 IKVWDLSIKPS---LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIP 264
++WD+ K + L NT+ASV PQ + + S DS+V +WD+
Sbjct: 280 ARIWDMRTKANVHTLTGHTNTVASVVAQATNPQ----IITGSH--DSTVRLWDLAAGK-S 332
Query: 265 LASFTEHKDVVSGLAWRGDPQLFIASS 291
+ + T HK V + P L++ +S
Sbjct: 333 VCTLTNHKKSVRSIVLH--PSLYMFAS 357
Score = 129 (50.5 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 41/179 (22%), Positives = 77/179 (43%)
Query: 68 ATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDI 127
ATGA + + +W+L K + H TV V+ + +L S +D ++ +D+
Sbjct: 188 ATGAGDRVIKIWDLAS---GKLKLSLTGHVSTVRGVAVS-TKHPYLFSCGEDRQVKCWDL 243
Query: 128 RCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPI 187
+ + +H + +V + +P A+ + T + WD+R + T H+ +
Sbjct: 244 EYNKVIRHYHGHLSAVYSLALHPTID-VLATSGRDSTARIWDMRTKANV-HTLTGHTNTV 301
Query: 188 FACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCS 246
+ + + T S D T+++WDL+ S+ N SV I P + AS S
Sbjct: 302 ASVVAQATNPQIITGSHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHPSL-YMFASAS 359
>FB|FBgn0036354 [details] [associations]
symbol:Poc1 "Proteome of centrioles 1" species:7227
"Drosophila melanogaster" [GO:0051297 "centrosome organization"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:AE014296 GO:GO:0051297 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GeneTree:ENSGT00700000104282 KO:K16482 EMBL:AY069349
RefSeq:NP_648640.1 UniGene:Dm.2164 ProteinModelPortal:Q9VU65
SMR:Q9VU65 STRING:Q9VU65 PaxDb:Q9VU65 PRIDE:Q9VU65
EnsemblMetazoa:FBtr0075863 GeneID:39502 KEGG:dme:Dmel_CG10191
UCSC:CG10191-RA CTD:39502 FlyBase:FBgn0036354 InParanoid:Q9VU65
OMA:PIYTLTG OrthoDB:EOG4DZ09Q PhylomeDB:Q9VU65 GenomeRNAi:39502
NextBio:813979 Bgee:Q9VU65 Uniprot:Q9VU65
Length = 391
Score = 166 (63.5 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 60/255 (23%), Positives = 111/255 (43%)
Query: 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLI 114
N VAWS + N +A+ + V +W ++ E F H + V V F + ++
Sbjct: 64 NGVAWSP-KGNLVASAGHDRTVKIWE-PKLRGVSGE--FVAHSKAVRSVDFDST-GHLML 118
Query: 115 SGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPE 174
+ S D + +++ + ++ F VR +F+P+ A+ S++ +++ +DV E
Sbjct: 119 TASDDKSAKIWRVARRQFVSSFAQQNNWVRSAKFSPNGKLV-ATASDDKSVRIYDVDSGE 177
Query: 175 KCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKW 234
C FT WHP LA A IK++D+S L+ + A V+ + +
Sbjct: 178 -CVRTFTEERAAPRQLAWHPWGNMLAVALGCNRIKIFDVSGSQLLQLYVVHSAPVNDVAF 236
Query: 235 RPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIAS-SRV 293
P F L+ D ++ + D+ P+ + T H D V+ +A+ D F S
Sbjct: 237 HPSGHFLLSGSD---DRTIRILDLLEGR-PIYTLTGHTDAVNAVAFSRDGDKFATGGSDR 292
Query: 294 SIIPRAKNIKIFIAS 308
++ N+ + AS
Sbjct: 293 QLLVWQSNLHTYDAS 307
Score = 158 (60.7 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 47/225 (20%), Positives = 111/225 (49%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
IAT +T+ V++WNL Q +R + F H VN V++ + N + S D T+++++
Sbjct: 33 IATSSTDSTVILWNLNQAARCIR---FASHSAPVNGVAWS-PKGNLVASAGHDRTVKIWE 88
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
+ + + F +++++VR V+F+ + + + S++ + + W V R + F +
Sbjct: 89 PKLRGVSGEFVAHSKAVRSVDFDS-TGHLMLTASDDKSAKIWRVAR-RQFVSSFAQQNNW 146
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCS 246
+ + + P +ATAS DK+++++D+ + A+ ++ W P ++ + +
Sbjct: 147 VRSAKFSPNGKLVATASDDKSVRIYDVDSGECVRTFTEERAAPRQLAWHPWG--NMLAVA 204
Query: 247 LVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
L + + ++D+ + L + H V+ +A+ ++ S
Sbjct: 205 LGCNR-IKIFDVSGSQL-LQLYVVHSAPVNDVAFHPSGHFLLSGS 247
Score = 128 (50.1 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 35/158 (22%), Positives = 75/158 (47%)
Query: 136 FHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE 195
F ++ + + F P A+ S + T+ W++ + +C +F +HS P+ W P+
Sbjct: 14 FTGHSGGITQLRFGPDGAQ-IATSSTDSTVILWNLNQAARCI-RFASHSAPVNGVAWSPK 71
Query: 196 HAWLATASRDKTIKVWDLSIKP-SLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
+A+A D+T+K+W+ ++ S E+ ++ A V + + L + D S
Sbjct: 72 GNLVASAGHDRTVKIWEPKLRGVSGEFVAHSKA-VRSVDFDSTGHLMLTASD---DKSAK 127
Query: 255 VWDI-RRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+W + RR ++ +SF + + V + + +L +S
Sbjct: 128 IWRVARRQFV--SSFAQQNNWVRSAKFSPNGKLVATAS 163
>WB|WBGene00004767 [details] [associations]
symbol:sel-10 species:6239 "Caenorhabditis elegans"
[GO:0008593 "regulation of Notch signaling pathway" evidence=IGI]
[GO:0030424 "axon" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR001810 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00646
PROSITE:PS50082 PROSITE:PS50181 PROSITE:PS50294 SMART:SM00256
SMART:SM00320 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660
GO:GO:0045746 GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 169 (64.5 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 52/220 (23%), Positives = 105/220 (47%)
Query: 66 HIATGATNGAVVVWNL--GQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMR 123
+I +G+T+ V VW+ G + + Q H TV ++ + + L++GS+D T+R
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSLLHTLQ-----GHTSTVRCMA---MAGSILVTGSRDTTLR 361
Query: 124 LFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAH 183
++D+ H + +VR V+F+ + S + T++ W+ +C T H
Sbjct: 362 VWDVESGRHLATLHGHHAAVRCVQFDGTT---VVSGGYDFTVKIWNAHTG-RCIRTLTGH 417
Query: 184 SGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFH-L 242
+ +++ + E + + + S D +I+VWD + +P + + + + + Q + + L
Sbjct: 418 NNRVYSLLFESERSIVCSGSLDTSIRVWDFT-RPEGQECVALLQGHTSLTSGMQLRGNIL 476
Query: 243 ASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRG 282
SC+ DS V VWDI + + H+ ++ L W G
Sbjct: 477 VSCN--ADSHVRVWDIHEGTC-VHMLSGHRSAITSLQWFG 513
>UNIPROTKB|Q93794 [details] [associations]
symbol:sel-10 "F-box/WD repeat-containing protein sel-10"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0030424 "axon" evidence=IDA] [GO:0046660 "female
sex differentiation" evidence=IMP] [GO:0045746 "negative regulation
of Notch signaling pathway" evidence=IGI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR001810 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00646 PROSITE:PS50082 PROSITE:PS50181
PROSITE:PS50294 SMART:SM00256 SMART:SM00320 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030424 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 SUPFAM:SSF81383 GO:GO:0046660 GO:GO:0045746
GeneTree:ENSGT00690000101849 KO:K10260 OMA:EECLHTL
HOGENOM:HOG000236264 EMBL:Z79757 EMBL:AF020788 PIR:T22703
RefSeq:NP_001023975.1 RefSeq:NP_506421.1 UniGene:Cel.2743
ProteinModelPortal:Q93794 SMR:Q93794 IntAct:Q93794 MINT:MINT-115740
STRING:Q93794 PRIDE:Q93794 EnsemblMetazoa:F55B12.3a GeneID:179878
KEGG:cel:CELE_F55B12.3 UCSC:F55B12.3b.1 CTD:179878
WormBase:F55B12.3a WormBase:F55B12.3b InParanoid:Q93794
NextBio:907238 Uniprot:Q93794
Length = 587
Score = 169 (64.5 bits), Expect = 9.7e-10, P = 9.7e-10
Identities = 52/220 (23%), Positives = 105/220 (47%)
Query: 66 HIATGATNGAVVVWNL--GQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMR 123
+I +G+T+ V VW+ G + + Q H TV ++ + + L++GS+D T+R
Sbjct: 310 YIVSGSTDRTVKVWSTVDGSLLHTLQ-----GHTSTVRCMA---MAGSILVTGSRDTTLR 361
Query: 124 LFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAH 183
++D+ H + +VR V+F+ + S + T++ W+ +C T H
Sbjct: 362 VWDVESGRHLATLHGHHAAVRCVQFDGTT---VVSGGYDFTVKIWNAHTG-RCIRTLTGH 417
Query: 184 SGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFH-L 242
+ +++ + E + + + S D +I+VWD + +P + + + + + Q + + L
Sbjct: 418 NNRVYSLLFESERSIVCSGSLDTSIRVWDFT-RPEGQECVALLQGHTSLTSGMQLRGNIL 476
Query: 243 ASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRG 282
SC+ DS V VWDI + + H+ ++ L W G
Sbjct: 477 VSCN--ADSHVRVWDIHEGTC-VHMLSGHRSAITSLQWFG 513
>MGI|MGI:1858197 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1, PRL1 homolog
(Arabidopsis)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1858197 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB EMBL:AF044334 EMBL:AK075993 EMBL:AK076007
EMBL:AK077197 EMBL:BC006750 EMBL:BC052895 IPI:IPI00331172
RefSeq:NP_058064.2 UniGene:Mm.286349 ProteinModelPortal:Q922V4
SMR:Q922V4 STRING:Q922V4 PhosphoSite:Q922V4 PaxDb:Q922V4
PRIDE:Q922V4 Ensembl:ENSMUST00000150268 GeneID:53317 KEGG:mmu:53317
UCSC:uc008ppi.1 InParanoid:Q922V4 NextBio:310109 Bgee:Q922V4
Genevestigator:Q922V4 GermOnline:ENSMUSG00000027998 Uniprot:Q922V4
Length = 513
Score = 168 (64.2 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 54/207 (26%), Positives = 93/207 (44%)
Query: 88 KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVE 147
K RV + H V ++ + W ++GS D T++++D+ + + +VR V
Sbjct: 194 KLYRVISGHLGWVRCIAVE-PGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI 252
Query: 148 FNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKT 207
+ SPY F S E+ ++ WD+ K + H ++ D HP L T SRD T
Sbjct: 253 VSTRSPYLF-SCGEDKQVKCWDLEY-NKVIRHYHGHLSAVYGLDLHPTLDVLVTCSRDST 310
Query: 208 IKVWDLSIKPS---LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIP 264
++WD+ K S L N +A+V PQ + + S D+++ +WD+
Sbjct: 311 ARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQ----IITGSH--DTTIRLWDLVAGKTR 364
Query: 265 LASFTEHKDVVSGLAWRGDPQLFIASS 291
+ + T HK V + P L+ +S
Sbjct: 365 V-TLTNHKKSVRAVVLH--PLLYTFAS 388
>UNIPROTKB|Q96DI7 [details] [associations]
symbol:SNRNP40 "U5 small nuclear ribonucleoprotein 40 kDa
protein" species:9606 "Homo sapiens" [GO:0005732 "small nucleolar
ribonucleoprotein complex" evidence=NAS] [GO:0000375 "RNA splicing,
via transesterification reactions" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC;TAS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0005682 "U5 snRNP"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] Reactome:REACT_71 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005654
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Reactome:REACT_1675 GO:GO:0005682 GO:GO:0000398 GO:GO:0071013
HOGENOM:HOG000091644 KO:K12857 GO:GO:0005732 EMBL:AL451070
EMBL:AC114495 CTD:9410 HOVERGEN:HBG105197 OrthoDB:EOG4JM7Q0
EMBL:AF090988 EMBL:BC001494 EMBL:AF083383 IPI:IPI00940685
RefSeq:NP_004805.2 UniGene:Hs.33962 ProteinModelPortal:Q96DI7
SMR:Q96DI7 IntAct:Q96DI7 MINT:MINT-1410013 STRING:Q96DI7
PhosphoSite:Q96DI7 DMDM:67462075 PaxDb:Q96DI7 PeptideAtlas:Q96DI7
PRIDE:Q96DI7 DNASU:9410 Ensembl:ENST00000263694 GeneID:9410
KEGG:hsa:9410 UCSC:uc001bso.3 GeneCards:GC01M031732 HGNC:HGNC:30857
HPA:HPA026527 HPA:HPA027345 MIM:607797 neXtProt:NX_Q96DI7
PharmGKB:PA164726132 InParanoid:Q96DI7 PhylomeDB:Q96DI7
ChiTaRS:SNRNP40 GenomeRNAi:9410 NextBio:35252 ArrayExpress:Q96DI7
Bgee:Q96DI7 CleanEx:HS_SNRNP40 Genevestigator:Q96DI7
GermOnline:ENSG00000060688 Uniprot:Q96DI7
Length = 357
Score = 165 (63.1 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 44/187 (23%), Positives = 93/187 (49%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ TG+ +G V +W++ + ++ + N ++ V V+F+ S+ +ISG D ++++D
Sbjct: 167 VCTGSDDGTVKLWDIRK--KAAIQTFQNTYQ--VLAVTFNDT-SDQIISGGIDNDIKVWD 221
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR--RP-EKC--FYQFT 181
+R + T + +SV + + Y ++ +N T++ WDVR P E+C +Q
Sbjct: 222 LRQNKLTYTMRGHADSVTGLSLSSEGSYLLSNAMDN-TVRVWDVRPFAPKERCVKIFQGN 280
Query: 182 AHSGP--IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRK 239
H+ + C W P+ + +A S D+ + VWD + + L S++ + + P
Sbjct: 281 VHNFEKNLLRCSWSPDGSKIAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEP 340
Query: 240 FHLASCS 246
+++ S
Sbjct: 341 IIISASS 347
Score = 153 (58.9 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 48/200 (24%), Positives = 90/200 (45%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHY-VESNWLISGSQDGTMRLF 125
+A+ + +++WN+ H V + HY + + L S S D T+ ++
Sbjct: 81 LASAGFDRLILLWNV--YGDCDNYATLKGHSGAV--MELHYNTDGSMLFSASTDKTVAVW 136
Query: 126 DIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSG 185
D E K +T V P + S++GT++ WD+R+ K Q ++
Sbjct: 137 DSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK--KAAIQTFQNTY 194
Query: 186 PIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKFHLAS 244
+ A ++ + + D IKVWDL + L Y++ A SV+ + + + L++
Sbjct: 195 QVLAVTFNDTSDQIISGGIDNDIKVWDLR-QNKLTYTMRGHADSVTGLSLSSEGSYLLSN 253
Query: 245 CSLVVDSSVNVWDIRRPYIP 264
+D++V VWD+R P+ P
Sbjct: 254 A---MDNTVRVWDVR-PFAP 269
Score = 120 (47.3 bits), Expect = 0.00014, P = 0.00014
Identities = 37/157 (23%), Positives = 71/157 (45%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
+ I +G + + VW+L Q +K H +V +S E ++L+S + D T+R+
Sbjct: 206 DQIISGGIDNDIKVWDLRQ---NKLTYTMRGHADSVTGLSLSS-EGSYLLSNAMDNTVRV 261
Query: 125 FDIRC----QESTKIFHSNTESVRD----VEFNPHSPYAFASVSENGTIQQWDVRRPEKC 176
+D+R + KIF N + ++P A+ S + + WD +
Sbjct: 262 WDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGS-KIAAGSADRFVYVWDTTS-RRI 319
Query: 177 FYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
Y+ H+G I +HP+ + +AS DK + + ++
Sbjct: 320 LYKLPGHAGSINEVAFHPDEPIIISASSDKRLYMGEI 356
>UNIPROTKB|E1BVN5 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
CTD:5356 GeneTree:ENSGT00700000104496 KO:K12862 OMA:ITAEADK
EMBL:AADN02016546 IPI:IPI00576149 RefSeq:XP_420368.2
UniGene:Gga.9982 ProteinModelPortal:E1BVN5
Ensembl:ENSGALT00000015067 GeneID:422401 KEGG:gga:422401
NextBio:20825038 Uniprot:E1BVN5
Length = 516
Score = 168 (64.2 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 51/191 (26%), Positives = 87/191 (45%)
Query: 88 KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVE 147
K RV + H V ++ + W ++GS D T++++D+ + + +VR V
Sbjct: 197 KLYRVISGHLGWVRCIAVE-PGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI 255
Query: 148 FNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKT 207
+ SPY F S E+ ++ WD+ K + H ++ D HP L T SRD T
Sbjct: 256 VSARSPYLF-SCGEDKQVKCWDLEY-NKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDST 313
Query: 208 IKVWDLSIKPS---LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIP 264
++WD+ K S L N +A+V PQ + + S D+++ +WD+
Sbjct: 314 ARIWDVRTKASVHTLSGHTNAVATVKCQAAEPQ----VVTGSH--DTTIRLWDLVAGKTR 367
Query: 265 LASFTEHKDVV 275
+ + T HK V
Sbjct: 368 V-TLTNHKKSV 377
>UNIPROTKB|Q8NHV4 [details] [associations]
symbol:NEDD1 "Protein NEDD1" species:9606 "Homo sapiens"
[GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005813 "centrosome" evidence=IDA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005829 GO:GO:0005813 Reactome:REACT_115566
GO:GO:0000086 GO:GO:0051301 GO:GO:0007067 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
EMBL:CH471054 CTD:121441 HOGENOM:HOG000034642 HOVERGEN:HBG055623
KO:K16547 OrthoDB:EOG4NZTSQ EMBL:AK093221 EMBL:AK303656
EMBL:AK315821 EMBL:AC007564 EMBL:AC013417 EMBL:BC027605
IPI:IPI00169345 IPI:IPI00789363 RefSeq:NP_001128647.1
RefSeq:NP_001128648.1 RefSeq:NP_001128649.1 RefSeq:NP_690869.1
UniGene:Hs.740471 ProteinModelPortal:Q8NHV4 SMR:Q8NHV4
DIP:DIP-48838N IntAct:Q8NHV4 STRING:Q8NHV4 PhosphoSite:Q8NHV4
DMDM:74762597 PaxDb:Q8NHV4 PRIDE:Q8NHV4 DNASU:121441
Ensembl:ENST00000266742 Ensembl:ENST00000411739
Ensembl:ENST00000429527 Ensembl:ENST00000457368 GeneID:121441
KEGG:hsa:121441 UCSC:uc001teu.4 GeneCards:GC12P097301
HGNC:HGNC:7723 HPA:HPA038591 MIM:600372 neXtProt:NX_Q8NHV4
PharmGKB:PA31531 InParanoid:Q8NHV4 PhylomeDB:Q8NHV4
GenomeRNAi:121441 NextBio:80736 ArrayExpress:Q8NHV4 Bgee:Q8NHV4
CleanEx:HS_NEDD1 Genevestigator:Q8NHV4 GermOnline:ENSG00000139350
Uniprot:Q8NHV4
Length = 660
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 58/233 (24%), Positives = 109/233 (46%)
Query: 60 SCIEEN----HIATGATNGAVVVWNLGQISRSKQ-ERVFNDHKRTVNKVSFHYVESNWLI 114
+C+ N ++ +G N V +W+L +SK+ R DHK V V++++ + ++
Sbjct: 81 TCVNLNSTSMYLVSGGLNNTVNIWDL----KSKRVHRSLKDHKDQVTCVTYNWNDC-YIA 135
Query: 115 SGSQDGTMRLFDIRCQ-ESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRP 173
SGS G + L + ST H + +SVR ++++ SVS+NG + WDV
Sbjct: 136 SGSLSGEIILHSVTTNLSSTPFGHGSNQSVRHLKYSLFKKSLLGSVSDNGIVTLWDVNS- 194
Query: 174 EKCFYQF-TAHSGPIFACDWHPEHAWL-ATASRDKTIKVWDLSIKPSLEYSINTIASVSR 231
+ ++ F + H P + P + L T DK I ++D S K L ++ ++
Sbjct: 195 QSPYHNFDSVHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSK-KLVKTLVADTPLTA 253
Query: 232 IKWRPQRKFHLASCSLVVDSS---VNVWDIRRPYIPLASFTEHKDVVSGLAWR 281
+ + P +L + SS + +D+R P+ + + HK V +A++
Sbjct: 254 VDFMPD------GATLAIGSSRGKIYQYDLRMLKSPVKTISAHKTSVQCIAFQ 300
>UNIPROTKB|G3V3F1 [details] [associations]
symbol:NEDD1 "Neural cell expressed, developmentally
down-regulated 1, isoform CRA_c" species:9606 "Homo sapiens"
[GO:0000242 "pericentriolar material" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005814 "centriole" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0045177
"apical part of cell" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0045177
EMBL:CH471054 GO:GO:0005932 GO:GO:0000242 GO:GO:0000922 CTD:121441
KO:K16547 OMA:FSPIRDD EMBL:AC007564 EMBL:AC013417
RefSeq:NP_001128647.1 UniGene:Hs.740471 GeneID:121441
KEGG:hsa:121441 HGNC:HGNC:7723 GenomeRNAi:121441 NextBio:80736
ProteinModelPortal:G3V3F1 SMR:G3V3F1 PRIDE:G3V3F1
Ensembl:ENST00000557644 ArrayExpress:G3V3F1 Bgee:G3V3F1
Uniprot:G3V3F1
Length = 667
Score = 169 (64.5 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 58/233 (24%), Positives = 109/233 (46%)
Query: 60 SCIEEN----HIATGATNGAVVVWNLGQISRSKQ-ERVFNDHKRTVNKVSFHYVESNWLI 114
+C+ N ++ +G N V +W+L +SK+ R DHK V V++++ + ++
Sbjct: 88 TCVNLNSTSMYLVSGGLNNTVNIWDL----KSKRVHRSLKDHKDQVTCVTYNWNDC-YIA 142
Query: 115 SGSQDGTMRLFDIRCQ-ESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRP 173
SGS G + L + ST H + +SVR ++++ SVS+NG + WDV
Sbjct: 143 SGSLSGEIILHSVTTNLSSTPFGHGSNQSVRHLKYSLFKKSLLGSVSDNGIVTLWDVNS- 201
Query: 174 EKCFYQF-TAHSGPIFACDWHPEHAWL-ATASRDKTIKVWDLSIKPSLEYSINTIASVSR 231
+ ++ F + H P + P + L T DK I ++D S K L ++ ++
Sbjct: 202 QSPYHNFDSVHKAPASGICFSPVNELLFVTIGLDKRIILYDTSSK-KLVKTLVADTPLTA 260
Query: 232 IKWRPQRKFHLASCSLVVDSS---VNVWDIRRPYIPLASFTEHKDVVSGLAWR 281
+ + P +L + SS + +D+R P+ + + HK V +A++
Sbjct: 261 VDFMPD------GATLAIGSSRGKIYQYDLRMLKSPVKTISAHKTSVQCIAFQ 307
>ZFIN|ZDB-GENE-040426-2044 [details] [associations]
symbol:cdc20 "cell division cycle 20 homolog"
species:7955 "Danio rerio" [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-2044 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 HSSP:P16649 KO:K03363 CTD:991 HOVERGEN:HBG001024
EMBL:BC054907 IPI:IPI00611755 RefSeq:NP_998245.1 UniGene:Dr.105018
ProteinModelPortal:Q7SYD7 STRING:Q7SYD7 GeneID:406353
KEGG:dre:406353 InParanoid:Q7SYD7 NextBio:20817971
ArrayExpress:Q7SYD7 Uniprot:Q7SYD7
Length = 496
Score = 167 (63.8 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 51/233 (21%), Positives = 110/233 (47%)
Query: 31 IKDTEFVETHNLRV--GKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSK 88
+K + ++ ++ R+ +I +F N + W +N +A G N V +W+ G+
Sbjct: 163 VKKSRYISSYPERILDAPDIRNDFYLNLMDWG--RQNVLAVGLAN-QVYLWDAGEGDIVL 219
Query: 89 QERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEF 148
+++ +D++ + VS+ + N+L G+ D + L+D++ Q+ + ++ V + +
Sbjct: 220 LKKMEDDNEY-ICSVSWSK-DGNFLAIGTSDCKVELWDVQYQKRLRSMDGHSARVGCLSW 277
Query: 149 NPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTI 208
N H +S S +G I Q DVR + + F H+ + W P+ +LA+ D +
Sbjct: 278 NDH---ILSSGSRSGLIHQHDVRVADHHIFTFGGHTQEVCGLTWSPDGRYLASGGNDNMM 334
Query: 209 KVWDLSIKPSLEYSINTIA----SVSRIKWRPQRKFHLASCSLVVDSSVNVWD 257
+W ++ S +I+ ++ +V + W P + AS D + +W+
Sbjct: 335 YIWPMTTG-SENQAIHALSEHQGAVKALAWCPWQPNIPASGGGTSDRHIRIWN 386
Score = 146 (56.5 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 54/227 (23%), Positives = 99/227 (43%)
Query: 52 FSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESN 111
+ C+ V+WS + N +A G ++ V +W+ + K+ R + H V +S++ +
Sbjct: 229 YICS-VSWSK-DGNFLAIGTSDCKVELWD---VQYQKRLRSMDGHSARVGCLSWN---DH 280
Query: 112 WLISGSQDGTMRLFDIRCQESTKI-FHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDV 170
L SGS+ G + D+R + F +T+ V + ++P Y AS + + W +
Sbjct: 281 ILSSGSRSGLIHQHDVRVADHHIFTFGGHTQEVCGLTWSPDGRY-LASGGNDNMMYIWPM 339
Query: 171 RR--PEKCFYQFTAHSGPIFA---CDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINT 225
+ + + H G + A C W P + D+ I++W+ S + S++T
Sbjct: 340 TTGSENQAIHALSEHQGAVKALAWCPWQPNIPASGGGTSDRHIRIWNASSGSCIS-SLDT 398
Query: 226 IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHK 272
+ VS + + P K L S V +W Y A TEH+
Sbjct: 399 CSQVSSLVFAPNYK-ELVSGHGFAHDKVVIWK----YPSFAKVTEHE 440
>WB|WBGene00006810 [details] [associations]
symbol:unc-78 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040017 "positive regulation of locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IMP] [GO:0030240 "skeletal
muscle thin filament assembly" evidence=IMP] [GO:0040012
"regulation of locomotion" evidence=IGI;IMP] [GO:0030836 "positive
regulation of actin filament depolymerization" evidence=IDA]
[GO:0030837 "negative regulation of actin filament polymerization"
evidence=IDA] [GO:0051016 "barbed-end actin filament capping"
evidence=ISS] [GO:0016528 "sarcoplasm" evidence=IDA] [GO:0042643
"actomyosin, actin part" evidence=IDA] [GO:0003779 "actin binding"
evidence=ISS] [GO:0051015 "actin filament binding" evidence=IDA]
[GO:0030016 "myofibril" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 GO:GO:0040010
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0040011 GO:GO:0040017 GO:GO:0051015 GO:GO:0030016
GO:GO:0030240 GO:GO:0042643 GO:GO:0030163 GO:GO:0051016
GeneTree:ENSGT00390000009416 HOGENOM:HOG000162559 OMA:QTTHILK
EMBL:FO080344 GO:GO:0030836 GO:GO:0016528 EMBL:AF324437 PIR:T15410
RefSeq:NP_001024356.1 RefSeq:NP_001024357.1 UniGene:Cel.7803
PDB:1NR0 PDB:1PEV PDBsum:1NR0 PDBsum:1PEV ProteinModelPortal:Q11176
SMR:Q11176 World-2DPAGE:0011:Q11176 PaxDb:Q11176 PRIDE:Q11176
EnsemblMetazoa:C04F6.4a.1 EnsemblMetazoa:C04F6.4a.2 GeneID:180631
KEGG:cel:CELE_C04F6.4 UCSC:C04F6.4a CTD:180631 WormBase:C04F6.4a
WormBase:C04F6.4b InParanoid:Q11176 EvolutionaryTrace:Q11176
NextBio:910190 Uniprot:Q11176
Length = 611
Score = 154 (59.3 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 48/168 (28%), Positives = 77/168 (45%)
Query: 56 DVAWSCIEENHIATGATN---GAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNW 112
D++W + A G G V +++ G + + R +N V F
Sbjct: 108 DISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGN-----LTGQARAMNSVDFKPSRPFR 162
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQW---D 169
+ISGS D T+ +F+ + F +T+ V V +NP FAS +GTI + D
Sbjct: 163 IISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSL-FASTGGDGTIVLYNGVD 221
Query: 170 VRRP---EKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLS 214
+ E + AHSG +F W P+ +A+AS DKTIK+W+++
Sbjct: 222 GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVA 269
Score = 57 (25.1 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 227 ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRP 261
A V+ + W P LA+ SL D+SV VW++ +P
Sbjct: 537 AKVACVSWSPDN-VRLATGSL--DNSVIVWNMNKP 568
Score = 39 (18.8 bits), Expect = 9.2e-08, Sum P(2) = 9.2e-08
Identities = 12/51 (23%), Positives = 22/51 (43%)
Query: 250 DSSVNVWDIRRPYIPLASFTE-HKDVVSGLAWRGDPQLFIAS--SRVSIIP 297
+ +N WDI I F + H +++G+ LF S + ++P
Sbjct: 345 EGHINSWDISTG-ISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVP 394
>UNIPROTKB|G4MNI3 [details] [associations]
symbol:MGG_05616 "Pre-mRNA-splicing factor prp46"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:CM001231 KO:K12862 RefSeq:XP_003710501.1
ProteinModelPortal:G4MNI3 EnsemblFungi:MGG_05616T0 GeneID:2675862
KEGG:mgr:MGG_05616 Uniprot:G4MNI3
Length = 510
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 51/208 (24%), Positives = 90/208 (43%)
Query: 88 KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVE 147
K RV + H V ++ ++ W SG+ D T++++D+ + +VR +
Sbjct: 192 KLMRVISGHLGWVRALAVE-PDNKWFASGAGDRTIKIWDLASGRLRLTLTGHISTVRGLA 250
Query: 148 FNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKT 207
+P PY F S +E+ ++ WD+ K + H ++ HP L T RD
Sbjct: 251 VSPRHPYLF-SCAEDKMVKCWDLET-NKVIRHYHGHLSGVYTLALHPTLDVLVTGGRDGV 308
Query: 208 IKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLAS 267
+VWD+ + ++ +VS + + + + + SL DS+V +WD+ +
Sbjct: 309 ARVWDMRTRSNIHVLSGHTGTVSELVCQ-EADPQVITGSL--DSTVRMWDLAAGKT-MGV 364
Query: 268 FTEHKDVVSGLAWRGDPQLFIASSRVSI 295
T HK V LA F + S SI
Sbjct: 365 LTHHKKGVRALATHPTEFTFASGSAGSI 392
Score = 127 (49.8 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 39/147 (26%), Positives = 75/147 (51%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+ TG +G VW++ +RS V + H TV+++ + +I+GS D T+R++D
Sbjct: 300 LVTGGRDGVARVWDMR--TRSNIH-VLSGHTGTVSELVCQEADPQ-VITGSLDSTVRMWD 355
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQ-FTAHSG 185
+ ++ + + + VR + +P + + FAS S G+I+QW + PE F Q F H+
Sbjct: 356 LAAGKTMGVLTHHKKGVRALATHP-TEFTFASGSA-GSIKQW--KCPEGAFMQNFEGHNS 411
Query: 186 PIFACDWHPEHAWLATASRDKTIKVWD 212
I + ++ + + A ++ WD
Sbjct: 412 IINTLSVNDQNVFFSGADNG-SMSFWD 437
>UNIPROTKB|Q5AZD9 [details] [associations]
symbol:AN6341.2 "Coronin" species:227321 "Aspergillus
nidulans FGSC A4" [GO:0005826 "actomyosin contractile ring"
evidence=ISS] [GO:0005885 "Arp2/3 protein complex" evidence=ISS]
[GO:0030479 "actin cortical patch" evidence=ISS] [GO:0034316
"negative regulation of Arp2/3 complex-mediated actin nucleation"
evidence=ISS] [GO:0051015 "actin filament binding" evidence=ISS]
[GO:0051666 "actin cortical patch localization" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051015 GO:GO:0030479 EMBL:AACD01000107 GO:GO:0005826
GO:GO:0051666 GO:GO:0034316 GO:GO:0005885 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OrthoDB:EOG4TJ02B RefSeq:XP_663945.1
ProteinModelPortal:Q5AZD9 STRING:Q5AZD9 GeneID:2871240
KEGG:ani:AN6341.2 Uniprot:Q5AZD9
Length = 595
Score = 168 (64.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 76/275 (27%), Positives = 121/275 (44%)
Query: 41 NLRVGKNI-NLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSK-QERV--FNDH 96
NLRV +N + N + + + N A G GA V L + R K ER+ F H
Sbjct: 11 NLRVSRNAWDTNLVKANPKYLSV--NWEAGGG--GAFAVIPLEE--RGKLPERIPLFRGH 64
Query: 97 KRTVNKVSFHYVESNWLISGSQDGTMRLF----------DIRCQESTKI-----FHSNTE 141
V ++ + + SGS DG + L+ D+ + + + +
Sbjct: 65 TAVVLDTDWNPFNDDLIASGSDDGRVFLWRVPEGFTLSPDVDADDIQDVAPVGKLSGHPK 124
Query: 142 SVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACD-WHPEHAWLA 200
V V FNP + A+ S + T++ WD+ E + T + G I W + L
Sbjct: 125 KVGHVLFNPAAENILATASGDYTVKIWDI---EAGASKLTLNVGDIVQSQSWSANGSLLV 181
Query: 201 TASRDKTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQR-KFHLASCSLVVDSSVNVWDI 258
T SRDK ++VWD+ +P+ E +T A SR W +R +F S + D + +WDI
Sbjct: 182 TTSRDKKLRVWDVRQERPAHEGQGHTGAKNSRSVWLGERDRFATTGFSKMSDRQLALWDI 241
Query: 259 RRPYIPLASFTEHKDVVSGLA---WRGDPQ-LFIA 289
R P +P+ F + D +SG+ W Q L++A
Sbjct: 242 RSPQLPIDGF-KTLDSISGVCMPFWDDGTQCLYLA 275
>UNIPROTKB|Q2KID6 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9913 "Bos
taurus" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0008380 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0071013 EMBL:BC112677
IPI:IPI00704198 RefSeq:NP_001039827.1 UniGene:Bt.74313
ProteinModelPortal:Q2KID6 STRING:Q2KID6 PRIDE:Q2KID6
Ensembl:ENSBTAT00000029844 GeneID:533951 KEGG:bta:533951 CTD:5356
GeneTree:ENSGT00700000104496 HOGENOM:HOG000207595
HOVERGEN:HBG053621 InParanoid:Q2KID6 KO:K12862 OMA:ITAEADK
OrthoDB:EOG4M65HB NextBio:20876207 Uniprot:Q2KID6
Length = 513
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 51/191 (26%), Positives = 87/191 (45%)
Query: 88 KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVE 147
K RV + H V ++ + W ++GS D T++++D+ + + +VR V
Sbjct: 194 KLYRVISGHLGWVRCIAVE-PGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI 252
Query: 148 FNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKT 207
+ SPY F S E+ ++ WD+ K + H ++ D HP L T SRD T
Sbjct: 253 VSTRSPYLF-SCGEDKQVKCWDLEY-NKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDST 310
Query: 208 IKVWDLSIKPS---LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIP 264
++WD+ K S L N +A+V PQ + + S D+++ +WD+
Sbjct: 311 ARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQ----IITGSH--DTTIRLWDLVAGKTR 364
Query: 265 LASFTEHKDVV 275
+ + T HK V
Sbjct: 365 V-TLTNHKKSV 374
>UNIPROTKB|O43660 [details] [associations]
symbol:PLRG1 "Pleiotropic regulator 1" species:9606 "Homo
sapiens" [GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0004871 "signal transducer activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0003714 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0004871
EMBL:CH471056 GO:GO:0000398 GO:GO:0071013 CTD:5356
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF044333 EMBL:AK002108 EMBL:BC020786 EMBL:BC106004
IPI:IPI00002624 IPI:IPI00382756 RefSeq:NP_001188493.1
RefSeq:NP_002660.1 UniGene:Hs.249996 ProteinModelPortal:O43660
SMR:O43660 IntAct:O43660 MINT:MINT-2999551 STRING:O43660
PhosphoSite:O43660 PaxDb:O43660 PRIDE:O43660
Ensembl:ENST00000302078 Ensembl:ENST00000499023 GeneID:5356
KEGG:hsa:5356 UCSC:uc003iny.3 UCSC:uc003inz.3 GeneCards:GC04M155457
HGNC:HGNC:9089 HPA:HPA035932 MIM:605961 neXtProt:NX_O43660
PharmGKB:PA33416 PhylomeDB:O43660 GenomeRNAi:5356 NextBio:20762
ArrayExpress:O43660 Bgee:O43660 CleanEx:HS_PLRG1
Genevestigator:O43660 GermOnline:ENSG00000171566 Uniprot:O43660
Length = 514
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 51/191 (26%), Positives = 87/191 (45%)
Query: 88 KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVE 147
K RV + H V ++ + W ++GS D T++++D+ + + +VR V
Sbjct: 195 KLYRVISGHLGWVRCIAVE-PGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI 253
Query: 148 FNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKT 207
+ SPY F S E+ ++ WD+ K + H ++ D HP L T SRD T
Sbjct: 254 VSTRSPYLF-SCGEDKQVKCWDLEY-NKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDST 311
Query: 208 IKVWDLSIKPS---LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIP 264
++WD+ K S L N +A+V PQ + + S D+++ +WD+
Sbjct: 312 ARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQ----IITGSH--DTTIRLWDLVAGKTR 365
Query: 265 LASFTEHKDVV 275
+ + T HK V
Sbjct: 366 V-TLTNHKKSV 375
>RGD|621047 [details] [associations]
symbol:Plrg1 "pleiotropic regulator 1" species:10116 "Rattus
norvegicus" [GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:621047 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016607
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006397
GO:GO:0071013 CTD:5356 GeneTree:ENSGT00700000104496
HOGENOM:HOG000207595 HOVERGEN:HBG053621 KO:K12862 OrthoDB:EOG4M65HB
EMBL:AF128241 EMBL:BC087742 IPI:IPI00203832 RefSeq:NP_068525.1
UniGene:Rn.44181 ProteinModelPortal:Q9WUC8 STRING:Q9WUC8
PRIDE:Q9WUC8 Ensembl:ENSRNOT00000009113 GeneID:60376 KEGG:rno:60376
UCSC:RGD:621047 InParanoid:Q9WUC8 NextBio:612055
Genevestigator:Q9WUC8 GermOnline:ENSRNOG00000006655 Uniprot:Q9WUC8
Length = 514
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 51/191 (26%), Positives = 87/191 (45%)
Query: 88 KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVE 147
K RV + H V ++ + W ++GS D T++++D+ + + +VR V
Sbjct: 195 KLYRVISGHLGWVRCIAVE-PGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI 253
Query: 148 FNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKT 207
+ SPY F S E+ ++ WD+ K + H ++ D HP L T SRD T
Sbjct: 254 VSTRSPYLF-SCGEDKQVKCWDLEY-NKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDST 311
Query: 208 IKVWDLSIKPS---LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIP 264
++WD+ K S L N +A+V PQ + + S D+++ +WD+
Sbjct: 312 ARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQ----IITGSH--DTTIRLWDLVAGKTR 365
Query: 265 LASFTEHKDVV 275
+ + T HK V
Sbjct: 366 V-TLTNHKKSV 375
>UNIPROTKB|E2QYT6 [details] [associations]
symbol:PLRG1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0071013
GeneTree:ENSGT00700000104496 OMA:ITAEADK EMBL:AAEX03010065
Ensembl:ENSCAFT00000013353 Uniprot:E2QYT6
Length = 515
Score = 167 (63.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 51/191 (26%), Positives = 87/191 (45%)
Query: 88 KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVE 147
K RV + H V ++ + W ++GS D T++++D+ + + +VR V
Sbjct: 196 KLYRVISGHLGWVRCIAVE-PGNQWFVTGSADRTIKIWDLASGKLKLSLTGHISTVRGVI 254
Query: 148 FNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKT 207
+ SPY F S E+ ++ WD+ K + H ++ D HP L T SRD T
Sbjct: 255 VSTRSPYLF-SCGEDKQVKCWDLEY-NKVIRHYHGHLSAVYGLDLHPTIDVLVTCSRDST 312
Query: 208 IKVWDLSIKPS---LEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIP 264
++WD+ K S L N +A+V PQ + + S D+++ +WD+
Sbjct: 313 ARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQ----IITGSH--DTTIRLWDLVAGKTR 366
Query: 265 LASFTEHKDVV 275
+ + T HK V
Sbjct: 367 V-TLTNHKKSV 376
>UNIPROTKB|Q2KJH4 [details] [associations]
symbol:WDR1 "WD repeat-containing protein 1" species:9913
"Bos taurus" [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 InterPro:IPR011045 SUPFAM:SSF50974
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
HOGENOM:HOG000162559 HOVERGEN:HBG000780 EMBL:BC105341
IPI:IPI00716638 RefSeq:NP_001039811.1 UniGene:Bt.59546
ProteinModelPortal:Q2KJH4 STRING:Q2KJH4 PRIDE:Q2KJH4 GeneID:533223
KEGG:bta:533223 CTD:9948 OrthoDB:EOG4WH8KB NextBio:20875962
Uniprot:Q2KJH4
Length = 606
Score = 168 (64.2 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 63/231 (27%), Positives = 96/231 (41%)
Query: 56 DVAWSCIEENHIATGATN---GAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNW 112
D+AW+ + G GAV +W+ G S E H + +N V
Sbjct: 107 DIAWTEDSKRIAVVGEGREKFGAVFLWDSGS---SVGE--ITGHNKVINSVDIKQSRPYR 161
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR 172
L++GS D F+ + + V V F+P FA+ S +G I +D +
Sbjct: 162 LVTGSDDNCAAFFEGPPFKFKFTISDHGRFVNCVRFSPDGN-RFATASADGQIFIYDGKT 220
Query: 173 PEK-CFYQFT-AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE-YSI--NTIA 227
EK C + AH G I+A W P+ L +AS DKT K+WD+++ + +++ N +
Sbjct: 221 GEKVCALGGSKAHDGGIYAISWSPDSTHLLSASGDKTSKIWDVNVNSVVNTFTMGSNVLD 280
Query: 228 SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGL 278
W+ K HL S SL +N D P PL H + L
Sbjct: 281 QQLGCLWQ---KDHLLSISL--SGYINYLDKNNPSKPLRVIKGHSKSIQCL 326
>ASPGD|ASPL0000000923 [details] [associations]
symbol:AN6341 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0030479 "actin
cortical patch" evidence=IEA] [GO:0030139 "endocytic vesicle"
evidence=IEA] [GO:0035838 "growing cell tip" evidence=IEA]
[GO:0005826 "actomyosin contractile ring" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001301 HOGENOM:HOG000166356
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 OMA:LQDRRIA
ProteinModelPortal:C8V0Z9 EnsemblFungi:CADANIAT00006644
Uniprot:C8V0Z9
Length = 611
Score = 168 (64.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 76/275 (27%), Positives = 121/275 (44%)
Query: 41 NLRVGKNI-NLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSK-QERV--FNDH 96
NLRV +N + N + + + N A G GA V L + R K ER+ F H
Sbjct: 27 NLRVSRNAWDTNLVKANPKYLSV--NWEAGGG--GAFAVIPLEE--RGKLPERIPLFRGH 80
Query: 97 KRTVNKVSFHYVESNWLISGSQDGTMRLF----------DIRCQESTKI-----FHSNTE 141
V ++ + + SGS DG + L+ D+ + + + +
Sbjct: 81 TAVVLDTDWNPFNDDLIASGSDDGRVFLWRVPEGFTLSPDVDADDIQDVAPVGKLSGHPK 140
Query: 142 SVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACD-WHPEHAWLA 200
V V FNP + A+ S + T++ WD+ E + T + G I W + L
Sbjct: 141 KVGHVLFNPAAENILATASGDYTVKIWDI---EAGASKLTLNVGDIVQSQSWSANGSLLV 197
Query: 201 TASRDKTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQR-KFHLASCSLVVDSSVNVWDI 258
T SRDK ++VWD+ +P+ E +T A SR W +R +F S + D + +WDI
Sbjct: 198 TTSRDKKLRVWDVRQERPAHEGQGHTGAKNSRSVWLGERDRFATTGFSKMSDRQLALWDI 257
Query: 259 RRPYIPLASFTEHKDVVSGLA---WRGDPQ-LFIA 289
R P +P+ F + D +SG+ W Q L++A
Sbjct: 258 RSPQLPIDGF-KTLDSISGVCMPFWDDGTQCLYLA 291
>TAIR|locus:2016214 [details] [associations]
symbol:AT1G79990 species:3702 "Arabidopsis thaliana"
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006692 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04053 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002684 GO:GO:0005829 GO:GO:0006886
GO:GO:0030117 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005198 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR019185
Pfam:PF09801 IPI:IPI00537842 RefSeq:NP_178116.5 UniGene:At.22078
ProteinModelPortal:F4HQE6 SMR:F4HQE6 PRIDE:F4HQE6
EnsemblPlants:AT1G79990.1 GeneID:844339 KEGG:ath:AT1G79990
OMA:EHAVRES Uniprot:F4HQE6
Length = 1135
Score = 171 (65.3 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 53/231 (22%), Positives = 106/231 (45%)
Query: 64 ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMR 123
E I +G + +WN + K F+ + V F W+++G+ D +R
Sbjct: 242 EPWILASLYSGTLCIWNYQTQTMVKS---FDVTELPVRSAKF-IARKQWVVAGADDMFIR 297
Query: 124 LFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAH 183
+++ + K+F ++ + +R V +P PY +S S++ I+ WD + C F H
Sbjct: 298 VYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSS-SDDMLIKLWDWEKGWLCTQIFEGH 356
Query: 184 SGPIFACDWHPEHA-WLATASRDKTIKVWDLSIKPSLEYSINT-IASVSRIKW-RPQRKF 240
S + ++P+ A+AS D+TIK+W+L P ++++ + V+ + + K
Sbjct: 357 SHYVMQVTFNPKDTNTFASASLDRTIKIWNLG-SPDPNFTLDAHLKGVNCVDYFTGGDKP 415
Query: 241 HLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+L + S D + VWD + + + H VS +++ + + I S
Sbjct: 416 YLITGS--DDHTAKVWDYQTKSC-VQTLEGHTHNVSAVSFHPELPIIITGS 463
Score = 144 (55.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 33/148 (22%), Positives = 72/148 (48%)
Query: 91 RVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEF-- 148
++F H V +V+F+ ++N S S D T++++++ + ++ + V V++
Sbjct: 351 QIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFT 410
Query: 149 NPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTI 208
PY S++ T + WD + + C H+ + A +HPE + T S D T+
Sbjct: 411 GGDKPYLITG-SDDHTAKVWDYQT-KSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTV 468
Query: 209 KVWDLS---IKPSLEYSINTIASVSRIK 233
++W + ++ +L Y + + ++ IK
Sbjct: 469 RIWHATTYRLENTLNYGLERVWAIGHIK 496
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 165 (63.1 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 42/142 (29%), Positives = 68/142 (47%)
Query: 136 FHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-PEK-CFYQFT-AHSGPIFACDW 192
F +T SV D++++P FAS S + +I+ WD+R P K C T AH G + +W
Sbjct: 251 FMGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINW 310
Query: 193 HPEHAWLATASRDKTIKVWDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLV 248
+L + D +K+WDL S P + + +A ++ ++W PQ A+
Sbjct: 311 SRREPFLLSGGDDGALKIWDLRQFKSGSPVATFKQH-VAPITSVEWHPQDSGVFAASG-- 367
Query: 249 VDSSVNVWDIRRPYIPLASFTE 270
D+ + WD+ P A TE
Sbjct: 368 ADNQITQWDLAVERDPEAGDTE 389
Score = 145 (56.1 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 41/166 (24%), Positives = 73/166 (43%)
Query: 59 WSCIEENHIATGATNGAVVVWN-LGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGS 117
WS + TG + +W S +R F H R+V + + E S S
Sbjct: 216 WSPRVSGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFMGHTRSVEDLQWSPTEDTVFASCS 275
Query: 118 QDGTMRLFDIRCQESTKIFHSNTES----VRDVEFNPHSPYAFASVSENGTIQQWDVR-- 171
D ++R++DIR S + T + V + ++ P+ + ++G ++ WD+R
Sbjct: 276 ADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINWSRREPFLLSG-GDDGALKIWDLRQF 334
Query: 172 RPEKCFYQFTAHSGPIFACDWHPEHAWLATAS-RDKTIKVWDLSIK 216
+ F H PI + +WHP+ + + AS D I WDL+++
Sbjct: 335 KSGSPVATFKQHVAPITSVEWHPQDSGVFAASGADNQITQWDLAVE 380
Score = 125 (49.1 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 33/129 (25%), Positives = 64/129 (49%)
Query: 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQI-SRSKQERVFNDHKRTVNKVSFHYVESN 111
S D+ WS E+ A+ + + ++ +W++ S++ + H VN +++ E
Sbjct: 257 SVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINWSRREP- 315
Query: 112 WLISGSQDGTMRLFDIRCQES---TKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQW 168
+L+SG DG ++++D+R +S F + + VE++P FA+ + I QW
Sbjct: 316 FLLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPITSVEWHPQDSGVFAASGADNQITQW 375
Query: 169 DV---RRPE 174
D+ R PE
Sbjct: 376 DLAVERDPE 384
Score = 123 (48.4 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 32/119 (26%), Positives = 57/119 (47%)
Query: 180 FTAHSGPIFACDWHP-EHAWLATASRDKTIKVWDLSIKPSLEYSINTIAS----VSRIKW 234
F H+ + W P E A+ S D +I++WD+ PS + T ++ V+ I W
Sbjct: 251 FMGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNVINW 310
Query: 235 RPQRKFHLASCSLVVDSSVNVWDIR--RPYIPLASFTEHKDVVSGLAWRG-DPQLFIAS 290
+ F L+ D ++ +WD+R + P+A+F +H ++ + W D +F AS
Sbjct: 311 SRREPFLLSGGD---DGALKIWDLRQFKSGSPVATFKQHVAPITSVEWHPQDSGVFAAS 366
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 165 (63.1 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 45/150 (30%), Positives = 71/150 (47%)
Query: 136 FHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR-PEKCFYQFT--AHSGPIFACDW 192
F +T SV D++++P FAS S + +I+ WD+R P K T AH+G + W
Sbjct: 256 FVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISW 315
Query: 193 HPEHAWLATASRDKTIKVWDL----SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLV 248
+ +L + D +KVWDL S P + + +A V+ ++W PQ A+
Sbjct: 316 SRQEPFLLSGGDDGALKVWDLRQFKSGSPVATFKQH-VAPVTSVEWHPQDSGVFAASG-- 372
Query: 249 VDSSVNVWDIRRPYIPLASFTEHKDVVSGL 278
D+ + WD+ P A TE + GL
Sbjct: 373 ADNQITQWDLAVERDPEAGDTETDPGLVGL 402
Score = 145 (56.1 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 41/168 (24%), Positives = 75/168 (44%)
Query: 59 WSCIEENHIATGATNGAVVVWN-LGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGS 117
WS + TG + +W S +R F H R+V + + E S S
Sbjct: 221 WSPRVPGRLLTGDCQKNIHLWTPTDSGSWHVDQRPFVGHTRSVEDLQWSPTEDTVFASCS 280
Query: 118 QDGTMRLFDIR------CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR 171
D ++R++DIR C +T H+ +V + ++ P+ + ++G ++ WD+R
Sbjct: 281 ADASIRIWDIRAAPSKACMLTTPAAHNGDVNV--ISWSRQEPFLLSG-GDDGALKVWDLR 337
Query: 172 --RPEKCFYQFTAHSGPIFACDWHPEHAWLATAS-RDKTIKVWDLSIK 216
+ F H P+ + +WHP+ + + AS D I WDL+++
Sbjct: 338 QFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQWDLAVE 385
Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 36/119 (30%), Positives = 57/119 (47%)
Query: 180 FTAHSGPIFACDWHP-EHAWLATASRDKTIKVWDLSIKPSLEYSINTIAS----VSRIKW 234
F H+ + W P E A+ S D +I++WD+ PS + T A+ V+ I W
Sbjct: 256 FVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISW 315
Query: 235 RPQRKFHLASCSLVVDSSVNVWDIR--RPYIPLASFTEHKDVVSGLAWRG-DPQLFIAS 290
Q F L+ D ++ VWD+R + P+A+F +H V+ + W D +F AS
Sbjct: 316 SRQEPFLLSGGD---DGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAAS 371
Score = 126 (49.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 36/130 (27%), Positives = 65/130 (50%)
Query: 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFND--HKRTVNKVSFHYVES 110
S D+ WS E+ A+ + + ++ +W++ + + SK + H VN +S+ E
Sbjct: 262 SVEDLQWSPTEDTVFASCSADASIRIWDI-RAAPSKACMLTTPAAHNGDVNVISWSRQEP 320
Query: 111 NWLISGSQDGTMRLFDIRCQES---TKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQ 167
+L+SG DG ++++D+R +S F + V VE++P FA+ + I Q
Sbjct: 321 -FLLSGGDDGALKVWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADNQITQ 379
Query: 168 WDV---RRPE 174
WD+ R PE
Sbjct: 380 WDLAVERDPE 389
Score = 116 (45.9 bits), Expect = 0.00056, P = 0.00056
Identities = 36/121 (29%), Positives = 50/121 (41%)
Query: 175 KCFYQFTAHSGPIFACDWHPE-HAWLATASRDKTIKVWDLSIKPSLEYS----INTIASV 229
K + F+ H G FA DW P L T K I +W + S + SV
Sbjct: 204 KPIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDSGSWHVDQRPFVGHTRSV 263
Query: 230 SRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTE---HKDVVSGLAW-RGDPQ 285
++W P ASCS D+S+ +WDIR T H V+ ++W R +P
Sbjct: 264 EDLQWSPTEDTVFASCS--ADASIRIWDIRAAPSKACMLTTPAAHNGDVNVISWSRQEPF 321
Query: 286 L 286
L
Sbjct: 322 L 322
>UNIPROTKB|O75083 [details] [associations]
symbol:WDR1 "WD repeat-containing protein 1" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007605 "sensory
perception of sound" evidence=TAS] [GO:0002576 "platelet
degranulation" evidence=TAS] [GO:0005576 "extracellular region"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0007596
"blood coagulation" evidence=TAS] [GO:0030168 "platelet activation"
evidence=TAS] Reactome:REACT_604 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0005576
GO:GO:0030168 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005856 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0002576 GO:GO:0007605 EMBL:AC005674
HOVERGEN:HBG000780 CTD:9948 EMBL:AF020056 EMBL:AF020260
EMBL:AB010427 EMBL:AK291614 EMBL:AC093664 EMBL:BC000201
EMBL:BC002489 EMBL:BC030541 EMBL:AL050108 EMBL:AL110208
IPI:IPI00746165 IPI:IPI00903292 PIR:T13152 RefSeq:NP_005103.2
RefSeq:NP_059830.1 UniGene:Hs.128548 ProteinModelPortal:O75083
SMR:O75083 IntAct:O75083 STRING:O75083 PhosphoSite:O75083
OGP:O75083 REPRODUCTION-2DPAGE:IPI00746165
REPRODUCTION-2DPAGE:O75083 UCD-2DPAGE:O75083 PaxDb:O75083
PRIDE:O75083 Ensembl:ENST00000382451 Ensembl:ENST00000382452
Ensembl:ENST00000499869 Ensembl:ENST00000502702 GeneID:9948
KEGG:hsa:9948 UCSC:uc021xlv.1 UCSC:uc021xlw.1 GeneCards:GC04M010075
HGNC:HGNC:12754 HPA:CAB020804 MIM:604734 neXtProt:NX_O75083
PharmGKB:PA37358 OMA:LKDQKKC ChiTaRS:WDR1 GenomeRNAi:9948
NextBio:37534 ArrayExpress:O75083 Bgee:O75083 CleanEx:HS_WDR1
Genevestigator:O75083 GermOnline:ENSG00000071127 Uniprot:O75083
Length = 606
Score = 167 (63.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 63/229 (27%), Positives = 95/229 (41%)
Query: 56 DVAWSCIEENHIATGATN---GAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNW 112
D+AW+ + G GAV +W+ G S E H + +N V
Sbjct: 107 DIAWTEDSKRIAVVGEGREKFGAVFLWDSGS---SVGE--ITGHNKVINSVDIKQSRPYR 161
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR 172
L +GS D F+ + ++ V V F+P FA+ S +G I +D +
Sbjct: 162 LATGSDDNCAAFFEGPPFKFKFTIGDHSRFVNCVRFSPDGN-RFATASADGQIYIYDGKT 220
Query: 173 PEK-CFYQFT-AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLE-YSINTIASV 229
EK C + AH G I+A W P+ L +AS DKT K+WD+S+ + + + +
Sbjct: 221 GEKVCALGGSKAHDGGIYAISWSPDSTHLLSASGDKTSKIWDVSVNSVVSTFPMGSTVLD 280
Query: 230 SRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGL 278
++ Q K HL S SL +N D P PL H + L
Sbjct: 281 QQLGCLWQ-KDHLLSVSL--SGYINYLDRNNPSKPLHVIKGHSKSIQCL 326
>RGD|1305789 [details] [associations]
symbol:Wdr1 "WD repeat domain 1" species:10116 "Rattus
norvegicus" [GO:0003779 "actin binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1305789 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005856 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00390000009416
HOGENOM:HOG000162559 HOVERGEN:HBG000780 CTD:9948 OrthoDB:EOG4WH8KB
EMBL:AY986483 EMBL:BC085864 IPI:IPI00215349 RefSeq:NP_001014157.1
UniGene:Rn.3168 HSSP:Q11176 ProteinModelPortal:Q5RKI0 STRING:Q5RKI0
PhosphoSite:Q5RKI0 World-2DPAGE:0004:Q5RKI0 PRIDE:Q5RKI0
Ensembl:ENSRNOT00000024012 GeneID:360950 KEGG:rno:360950
InParanoid:Q5RKI0 NextBio:674693 Genevestigator:Q5RKI0
Uniprot:Q5RKI0
Length = 606
Score = 167 (63.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 64/231 (27%), Positives = 93/231 (40%)
Query: 56 DVAWSCIEENHIATGATN---GAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNW 112
D+AW+ + G GAV +W+ G S E H + +N V
Sbjct: 107 DIAWTEDSKRIAVVGEGREKFGAVFLWDTGS---SVGE--ITGHNKVINSVDIKQNRPYR 161
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR 172
L +GS D F+ + ++ V V F+P FA+ S +G I +D +
Sbjct: 162 LATGSDDNCAAFFEGPPFKFKFTIGDHSRFVNCVRFSPDGN-RFATASADGQIFIYDGKT 220
Query: 173 PEK-CFYQFT-AHSGPIFACDWHPEHAWLATASRDKTIKVWDL---SIKPSLEYSINTIA 227
EK C + AH G I+A W P+ L +AS DKT K+WD+ S+ + N +
Sbjct: 221 GEKVCALGGSKAHDGGIYAISWSPDSTHLLSASGDKTSKIWDVNVNSVVSTFPMGSNVLD 280
Query: 228 SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGL 278
W+ K HL S SL +N D P PL H + L
Sbjct: 281 QQLGCLWQ---KDHLLSISL--SGYINYLDKNNPSKPLRVIKGHSKSIQCL 326
>UNIPROTKB|Q3MHE2 [details] [associations]
symbol:PRPF4 "U4/U6 small nuclear ribonucleoprotein Prp4"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0071001 "U4/U6 snRNP" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR003648 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SMART:SM00500 GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016607 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006397 GO:GO:0005681 GO:GO:0015030
InterPro:IPR027106 PANTHER:PTHR19846 HSSP:P63005 GO:GO:0071001
InterPro:IPR014906 Pfam:PF08799 HOGENOM:HOG000157615 KO:K12662
EMBL:BC105270 IPI:IPI00688145 RefSeq:NP_001029502.1
UniGene:Bt.16360 ProteinModelPortal:Q3MHE2 SMR:Q3MHE2 STRING:Q3MHE2
PRIDE:Q3MHE2 Ensembl:ENSBTAT00000006004 GeneID:508735
KEGG:bta:508735 CTD:9128 GeneTree:ENSGT00690000101787
HOVERGEN:HBG030892 InParanoid:Q3MHE2 OMA:CKIWDLR OrthoDB:EOG45DWP9
NextBio:20868661 Uniprot:Q3MHE2
Length = 521
Score = 166 (63.5 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 70/274 (25%), Positives = 117/274 (42%)
Query: 27 KIFLIKDTEFVET---HNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQ 83
K++ + D + T HN VG + F ++ ++A+ A +G+V +W+L
Sbjct: 255 KLWSVPDCNLLHTLRGHNTNVGAIV---FHPKSTVSLDQKDVNLASCAADGSVKLWSLDS 311
Query: 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTES- 142
+ H V +V++H +L + D + RL+D+ QE +I H S
Sbjct: 312 ---DEPVADIEGHTVRVARVTWH-PSGRFLGTTCYDRSWRLWDLEAQE--EILHQEGHSM 365
Query: 143 -VRDVEFNPHSPYA-FASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLA 200
V D+ F+ A + G + WD+R +C H I+ ++ P +A
Sbjct: 366 GVYDIAFHQDGSLAGTGGLDAFGRV--WDLRTG-RCIMFLEGHLKEIYGINFSPNGYHIA 422
Query: 201 TASRDKTIKVWDLSIKPSLEYSINTIAS-VSRIKWRP-QRKFHLASCSLVVDSSVNVWDI 258
T S D T KVWDL + + Y+I + V+ +K+ P F L D++ +W
Sbjct: 423 TGSGDNTCKVWDLRQRRCV-YTIPAHQNLVTGVKFEPIHGNFLLTGA---YDNTAKIWT- 477
Query: 259 RRP-YIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
P + PL + H+ V GL D QL S
Sbjct: 478 -HPGWSPLKTLAGHEGKVMGLDISSDGQLIATCS 510
>DICTYBASE|DDB_G0275045 [details] [associations]
symbol:gpbB "Guanine nucleotide-binding protein
subunit beta-like protein" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0275045 GO:GO:0045335
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GenomeReviews:CM000151_GR EMBL:AAFI02000013 KO:K14753 OMA:IRVWQVM
EMBL:U27537 RefSeq:XP_643839.1 ProteinModelPortal:P46800 SMR:P46800
IntAct:P46800 STRING:P46800 SWISS-2DPAGE:P46800 PRIDE:P46800
EnsemblProtists:DDB0185122 GeneID:8619886 KEGG:ddi:DDB_G0275045
Uniprot:P46800
Length = 329
Score = 162 (62.1 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 43/192 (22%), Positives = 100/192 (52%)
Query: 69 TGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDI- 127
+G+ + + +W+ I++ R+F H + V V+F ++ +ISGS+D T+++++
Sbjct: 87 SGSWDNTLRLWD---ITKGVSTRLFKGHTQDVMSVAFSS-DNRQIISGSRDATIKVWNTL 142
Query: 128 -RCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGP 186
C+ + + ++ + V + F+P++P S S + ++ WD++ KC + T H+G
Sbjct: 143 GECKFTLEGPEAHQDWVSCIRFSPNTP-TIVSGSWDNKVKIWDIKS-FKCNHTLTDHTGY 200
Query: 187 IFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCS 246
+ P+ + A+ +D +W+LS L Y + +++ + + P K+ L++ +
Sbjct: 201 VNTVTISPDGSLCASGGKDTFACLWELSSGKPL-YKLEARNTINALAFSPN-KYWLSAAT 258
Query: 247 LVVDSSVNVWDI 258
D + +WD+
Sbjct: 259 ---DDKIIIWDL 267
Score = 152 (58.6 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 50/181 (27%), Positives = 80/181 (44%)
Query: 42 LRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNL---GQISRSKQERVFNDHKR 98
L VG + N +A S + I + + + V+VW L S K R H
Sbjct: 12 LEVGSLVGHNGFVTSIAVSPENPDTIISSSRDKTVMVWQLTPTDATSPGKAHRSLKGHSH 71
Query: 99 TVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFAS 158
V V + + + +SGS D T+RL+DI ST++F +T+ V V F+ + +
Sbjct: 72 FVQDVVISH-DGQFALSGSWDNTLRLWDITKGVSTRLFKGHTQDVMSVAFSSDNRQIISG 130
Query: 159 VSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDW------HPEHAWLATASRDKTIKVWD 212
S + TI+ W+ +C +FT GP DW P + + S D +K+WD
Sbjct: 131 -SRDATIKVWNTLG--EC--KFTLE-GPEAHQDWVSCIRFSPNTPTIVSGSWDNKVKIWD 184
Query: 213 L 213
+
Sbjct: 185 I 185
Score = 116 (45.9 bits), Expect = 0.00033, P = 0.00033
Identities = 43/164 (26%), Positives = 76/164 (46%)
Query: 57 VAWSCIEENHIATGATNGAVVVWN-LGQISRSKQERVFNDHKRTVNKVSFHYVESNWLIS 115
VA+S + I +G+ + + VWN LG+ + + H+ V+ + F + ++S
Sbjct: 118 VAFSS-DNRQIISGSRDATIKVWNTLGECKFTLEGP--EAHQDWVSCIRFS-PNTPTIVS 173
Query: 116 GSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEK 175
GS D ++++DI+ + +T V V +P AS ++ W++ K
Sbjct: 174 GSWDNKVKIWDIKSFKCNHTLTDHTGYVNTVTISPDGSLC-ASGGKDTFACLWELSSG-K 231
Query: 176 CFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSL 219
Y+ A + I A + P WL+ A+ DK I +WDL K L
Sbjct: 232 PLYKLEARN-TINALAFSPNKYWLSAATDDKII-IWDLLTKQVL 273
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 169 (64.5 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 57/228 (25%), Positives = 105/228 (46%)
Query: 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNW 112
S N +A+S + + + T + +G + VW+ I+ F +H +V V F
Sbjct: 347 STNSLAYSP-DGSRVVTASEDGKIKVWD---ITSGFCLATFEEHTSSVTAVQFAK-RGQV 401
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNTESVRD--VEFNPHSPYAFASVSENGTIQQWDV 170
+ S S DGT+R +D+ + + F + TE ++ + +P A +N I W V
Sbjct: 402 MFSSSLDGTVRAWDLIRYRNFRTF-TGTERIQFNCLAVDPSGEVVCAGSLDNFDIHVWSV 460
Query: 171 RRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVS 230
+ + + H GP+ + E++ LA+AS DKTI++W + + I + V
Sbjct: 461 QTGQ-LLDALSGHEGPVSCLSFSQENSVLASASWDKTIRIWSIFGRSQQVEPIEVYSDVL 519
Query: 231 RIKWRPQRKFHLASCSLVVDSSV-NVWDIRRPYIPLASFTEHKDVVSG 277
+ RP K +A +L S+ N+ D ++ + + KD++SG
Sbjct: 520 ALSMRPDGK-EVAVSTLKGQISIFNIEDAKQ----VGNIDCRKDIISG 562
>POMBASE|SPCC18.05c [details] [associations]
symbol:SPCC18.05c "notchless-like protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=ISS] [GO:0043234 "protein complex"
evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 PomBase:SPCC18.05c GO:GO:0043234
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CU329672 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0042254 HSSP:P16649 PRINTS:PR00319
HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972 Pfam:PF08154
PIR:T41148 RefSeq:NP_588384.1 ProteinModelPortal:O74855
STRING:O74855 EnsemblFungi:SPCC18.05c.1 GeneID:2539380
KEGG:spo:SPCC18.05c OMA:KAVRIWR OrthoDB:EOG4PP1R9 NextBio:20800545
Uniprot:O74855
Length = 502
Score = 165 (63.1 bits), Expect = 2.1e-09, P = 2.1e-09
Identities = 51/203 (25%), Positives = 90/203 (44%)
Query: 64 ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMR 123
E+H+ T AV + + ++R N H T+ F S+ L++GS D T R
Sbjct: 105 EDHLTLLYTPQAV--FRVRAVTRCTAS--MNGHDGTIISAQFSPSTSSRLVTGSGDFTAR 160
Query: 124 LFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAH 183
L+D Q +T V V + P + A+ S + TI+ WD ++ H
Sbjct: 161 LWDCDTQTPIATMKGHTNWVSCVAWAPDASI-IATGSMDNTIRFWDPKKGSPIGDALRRH 219
Query: 184 SGPIFACDWHPEHA-------WLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRP 236
+ PI A W P H LA+ S+D T+++W++ ++ L A ++ ++W
Sbjct: 220 TKPIMALCWQPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWGG 279
Query: 237 QRKFHLASCSLVVDSSVNVWDIR 259
Q + +S D ++ +WD +
Sbjct: 280 QNWIYSSS----YDKTIRIWDAK 298
Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 35/154 (22%), Positives = 78/154 (50%)
Query: 60 SCIEEN--HIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGS 117
+C++++ + + + + +++W+ Q S +K + H++ VN SF + + + S
Sbjct: 352 ACLKQSGERLVSASDDLQLILWD-PQKS-TKPITKMHGHQKVVNHASFS-PDGRCIATAS 408
Query: 118 QDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCF 177
D ++RL+D + + + +V ++ S +S S++ T++ WDVR +K
Sbjct: 409 FDSSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSS-SQDTTLKVWDVRS-KKMK 466
Query: 178 YQFTAHSGPIFACDWHPEHAWLATASRDKTIKVW 211
+ H +FA DW P+ +A+ DK +++W
Sbjct: 467 FDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 39/148 (26%), Positives = 69/148 (46%)
Query: 113 LISGSQDGTMRLFDIRCQESTKIF---HSNTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
L+S S D + L+D Q+STK H + + V F+P A+ S + +++ WD
Sbjct: 361 LVSASDDLQLILWDP--QKSTKPITKMHGHQKVVNHASFSPDGR-CIATASFDSSVRLWD 417
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI-NTIAS 228
+ K H ++ C W + L ++S+D T+KVWD+ K +++ +
Sbjct: 418 -GKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSK-KMKFDLPGHEDQ 475
Query: 229 VSRIKWRPQRKFHLASCSLVVDSSVNVW 256
V + W P + +AS D +V +W
Sbjct: 476 VFAVDWSPDGQ-RVASGG--ADKAVRIW 500
Score = 115 (45.5 bits), Expect = 0.00087, P = 0.00087
Identities = 30/128 (23%), Positives = 57/128 (44%)
Query: 158 SVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKP 217
S S++ + WD ++ K + H + + P+ +ATAS D ++++WD
Sbjct: 363 SASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGK 422
Query: 218 SLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSG 277
L +A+V + W + ++S D+++ VWD+R + H+D V
Sbjct: 423 FLATLRGHVAAVYQCAWSTDSRLLVSSSQ---DTTLKVWDVRSKKMKF-DLPGHEDQVFA 478
Query: 278 LAWRGDPQ 285
+ W D Q
Sbjct: 479 VDWSPDGQ 486
>ASPGD|ASPL0000037495 [details] [associations]
symbol:cdhA species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008054 "cyclin catabolic
process" evidence=IMP] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0030996 "cell cycle arrest in response to nitrogen starvation"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IEA] [GO:0000750 "pheromone-dependent signal
transduction involved in conjugation with cellular fusion"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001306 EMBL:AACD01000051
HOGENOM:HOG000195514 KO:K03364 OrthoDB:EOG43FM5B OMA:PMATANL
RefSeq:XP_660569.1 ProteinModelPortal:Q5B915 STRING:Q5B915
EnsemblFungi:CADANIAT00010116 GeneID:2874026 KEGG:ani:AN2965.2
Uniprot:Q5B915
Length = 592
Score = 166 (63.5 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 65/233 (27%), Positives = 98/233 (42%)
Query: 51 NFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVES 110
+F N V W N + G N +V +WN Q R + D TV VS+
Sbjct: 287 DFYLNLVDWG--SSNVLGVGLGN-SVYMWN-SQTGRVTKLCELKDD--TVTSVSW-IQRG 339
Query: 111 NWLISGSQDGTMRLFDI-RCQE-STKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQW 168
L G+ G ++++D RC+ T I H+N V + +N H S S + I
Sbjct: 340 THLSIGTGKGMVQIWDAERCRRLRTMIGHTNR--VGALAWNDH---ILTSGSRDRHIFHR 394
Query: 169 DVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD-LSIKPSLEYSINTIA 227
DVR P++ + + H + W+ E LA+ D + VWD L+ P +S +T A
Sbjct: 395 DVRSPDQYLRRLSGHKQEVCGLRWNTEDGQLASGGNDNKLLVWDKLNETPLYRFSDHT-A 453
Query: 228 SVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAW 280
+V I W P + LAS D ++ W+ L + V LAW
Sbjct: 454 AVKAITWSPHQHHLLASGGGTADRTIKFWNTATG--SLIKEVDTGSQVCNLAW 504
>ASPGD|ASPL0000055088 [details] [associations]
symbol:AN10058 species:162425 "Emericella nidulans"
[GO:0000027 "ribosomal large subunit assembly" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:BN001308 InterPro:IPR020472
PRINTS:PR00320 PRINTS:PR00319 HOGENOM:HOG000091641 OMA:HFTCKGH
InterPro:IPR012972 Pfam:PF08154 ProteinModelPortal:C8VTS6
EnsemblFungi:CADANIAT00002342 Uniprot:C8VTS6
Length = 518
Score = 165 (63.1 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 57/225 (25%), Positives = 103/225 (45%)
Query: 96 HKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKI--FHSNTESVRDVEFNPHSP 153
H + SF V S+ ++SGS D T R++D C T + +T V V ++P+
Sbjct: 147 HGEAILATSFSPVSSSTMVSGSGDSTARIWD--CDTGTPLHTLKGHTSWVLAVSYSPNGA 204
Query: 154 YAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAW------LATASRDKT 207
A+ S + T++ WD ++ + H I + W P H LA+AS+D T
Sbjct: 205 M-IATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPRLASASKDST 263
Query: 208 IKVWD-LSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266
+++WD +S + + S + SV+ ++W K + +S D ++ VW+ + + +
Sbjct: 264 VRIWDVISKRADIVLSGHK-GSVTCVRWGGTGKIYTSSH----DRTIKVWNSQTGTL-IQ 317
Query: 267 SFTEHKDVVSGLAWRGDPQLFIA-SSRVSIIPRAKNIKIFIASSR 310
+ + H V+ LA D L A +P + K+ +A R
Sbjct: 318 TLSAHAHRVNHLALSTDFILRTAYHDHTGKVPESDADKVAMAKKR 362
Score = 148 (57.2 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 43/169 (25%), Positives = 75/169 (44%)
Query: 128 RCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPI 187
RC S + E++ F+P S S S + T + WD + H+ +
Sbjct: 139 RCSASIA---GHGEAILATSFSPVSSSTMVSGSGDSTARIWDCDTGTP-LHTLKGHTSWV 194
Query: 188 FACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINT-IASVSRIKWRP---QRKFHLA 243
A + P A +AT S D T+++WD +L + + ++ + W P Q+ H
Sbjct: 195 LAVSYSPNGAMIATGSMDNTVRIWDAKKGQALGAPLKGHVKWITSLAWEPYHLQQSGHPR 254
Query: 244 SCSLVVDSSVNVWDI--RRPYIPLASFTEHKDVVSGLAWRGDPQLFIAS 290
S DS+V +WD+ +R I L+ HK V+ + W G +++ +S
Sbjct: 255 LASASKDSTVRIWDVISKRADIVLSG---HKGSVTCVRWGGTGKIYTSS 300
>UNIPROTKB|F1NNQ9 [details] [associations]
symbol:PRPF4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0015030 "Cajal
body" evidence=IEA] [GO:0071001 "U4/U6 snRNP" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR003648
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SMART:SM00500 GO:GO:0008380 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0015030 InterPro:IPR027106
PANTHER:PTHR19846 GO:GO:0071001 InterPro:IPR014906 Pfam:PF08799
GeneTree:ENSGT00690000101787 OMA:CKIWDLR EMBL:AADN02026938
EMBL:AADN02026937 IPI:IPI00576508 Ensembl:ENSGALT00000014388
Uniprot:F1NNQ9
Length = 521
Score = 165 (63.1 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 67/271 (24%), Positives = 119/271 (43%)
Query: 27 KIFLIKDTEFVETHNLRVGKNINLN-FSCNDVAWSCIEEN--HIATGATNGAVVVWNLGQ 83
K++ + D V H LR G + N+ + A +++ ++A+ A +G+V +W+L
Sbjct: 255 KLWSVPDCNLV--HTLR-GHSTNVGAIVFHPKATVSLDKKDVNLASCAADGSVKLWSL-- 309
Query: 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV 143
+ H V +V +H +L + D + RL+D+ QE +++ V
Sbjct: 310 -ESDEPVADIEGHSMRVARVMWH-PSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGV 367
Query: 144 RDVEFNPHSPYA-FASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATA 202
D+ F+ A + G + WD+R +C H I+ ++ P +AT
Sbjct: 368 YDIAFHTDGSLAGTGGLDAFGRV--WDLRTG-RCIMFLEGHLKEIYGLNFSPNGYHVATG 424
Query: 203 SRDKTIKVWDLSIKPSLEYSINTIAS-VSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRP 261
S D T KVWDL + + Y+I + V+ +K+ P L + + D++ +W P
Sbjct: 425 SGDNTCKVWDLRQRKCI-YTIPAHQNLVTGVKFEPNHGNFLLTGAY--DNTAKIWT--HP 479
Query: 262 -YIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+ PL + H+ V GL D QL S
Sbjct: 480 GWSPLKTLAGHEGKVMGLDISLDGQLIATCS 510
>WB|WBGene00015974 [details] [associations]
symbol:C18E3.5 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0018991 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649 HOGENOM:HOG000091644
OMA:HAGSVNE EMBL:FO080611 GeneTree:ENSGT00690000101787
RefSeq:NP_491325.1 ProteinModelPortal:O02097 SMR:O02097
STRING:O02097 PaxDb:O02097 EnsemblMetazoa:C18E3.5.1
EnsemblMetazoa:C18E3.5.2 GeneID:172015 KEGG:cel:CELE_C18E3.5
UCSC:C18E3.5 CTD:172015 WormBase:C18E3.5 InParanoid:O02097
NextBio:873669 Uniprot:O02097
Length = 331
Score = 161 (61.7 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 52/204 (25%), Positives = 96/204 (47%)
Query: 67 IATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFD 126
+A+ + + +WN+ + V HK + +V F+ +S+ L+S D T+R++D
Sbjct: 51 LASAGYDQQIFLWNV--FGECENFAVLKGHKGAIMEVKFN-ADSSHLVSAGTDKTVRVWD 107
Query: 127 IRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEK-----CFYQFT 181
+ + F S+T+ V V+ N P S S++GT+ D+R E C YQ T
Sbjct: 108 METGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMRSKEAAKKFICKYQQT 167
Query: 182 AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIA-SVSRIKWRPQRKF 240
A + A + + D IKVWD+ ++ + Y ++ +++ + F
Sbjct: 168 AVTFNDAADN-------VICGGIDNQIKVWDM-LRNDVRYVLSGHRDTITSLSVSHNGNF 219
Query: 241 HLASCSLVVDSSVNVWDIRRPYIP 264
L++ +D S+ WDIR P++P
Sbjct: 220 LLSNS---MDCSLMSWDIR-PFVP 239
Score = 121 (47.7 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 47/196 (23%), Positives = 84/196 (42%)
Query: 33 DTEFVETHNLRVGKNINLNFSCN----DVAWSCIEENHIATGATNGAVVVWNLGQISRSK 88
D V H++R K F C V ++ +N I G N + VW++ R+
Sbjct: 142 DDGTVMVHDMR-SKEAAKKFICKYQQTAVTFNDAADNVICGGIDN-QIKVWDM---LRND 196
Query: 89 QERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR----CQESTKIF----HSNT 140
V + H+ T+ +S + N+L+S S D ++ +DIR Q + H+
Sbjct: 197 VRYVLSGHRDTITSLSVSH-NGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFE 255
Query: 141 ESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLA 200
+++ ++P Y A S + + W+ + C Y+ H G + HP L
Sbjct: 256 KNLLKCGWSPRDNYITAG-SADRFVYVWNAKS-RACVYKLPGHLGSVNCTALHPTQQILL 313
Query: 201 TASRDKTIKVWDLSIK 216
+A DKTI + +L ++
Sbjct: 314 SAGSDKTIFLGELDLE 329
Score = 119 (46.9 bits), Expect = 0.00015, P = 0.00015
Identities = 48/205 (23%), Positives = 84/205 (40%)
Query: 63 EENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTM 122
+ +H+ + T+ V VW++ R F H VN V + + S S DGT+
Sbjct: 90 DSSHLVSAGTDKTVRVWDM---ETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTV 146
Query: 123 RLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTA 182
+ D+R +E+ K F + V FN + +N I+ WD+ R + Y +
Sbjct: 147 MVHDMRSKEAAKKFICKYQQTA-VTFNDAADNVICGGIDN-QIKVWDMLRND-VRYVLSG 203
Query: 183 HSGPIFACDWHPEHAWLATASRDKTIKVWDLS-IKPS----LEY---SINTIASVSRIKW 234
H I + +L + S D ++ WD+ P+ Y S N ++ + W
Sbjct: 204 HRDTITSLSVSHNGNFLLSNSMDCSLMSWDIRPFVPAQRLVARYQGASHNFEKNLLKCGW 263
Query: 235 RPQRKFHLASCSLVVDSSVNVWDIR 259
P+ + A + D V VW+ +
Sbjct: 264 SPRDNYITAGSA---DRFVYVWNAK 285
WARNING: HSPs involving 793 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.133 0.414 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 330 330 0.00089 116 3 11 22 0.36 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1043
No. of states in DFA: 621 (66 KB)
Total size of DFA: 259 KB (2136 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.98u 0.12s 26.10t Elapsed: 00:00:01
Total cpu time: 26.06u 0.12s 26.18t Elapsed: 00:00:02
Start: Thu Aug 15 17:04:16 2013 End: Thu Aug 15 17:04:18 2013
WARNINGS ISSUED: 2