RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy6213
(330 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 85.2 bits (209), Expect = 2e-19
Identities = 36/179 (20%), Positives = 75/179 (41%), Gaps = 24/179 (13%)
Query: 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVES-- 110
+ + IA+ + + V VW ++ + + +H+ V +S+ S
Sbjct: 144 EWVRMVRPNQDGTLIASCSNDQTVRVWV---VATKECKAELREHRHVVECISWAPESSYS 200
Query: 111 -----------------NWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSP 153
+L+SGS+D T++++D+ + VR V F+
Sbjct: 201 SISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGK 260
Query: 154 YAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
+ S +++ T++ WD + +C AH + + D+H ++ T S D+T+KVW+
Sbjct: 261 F-ILSCADDKTLRVWDYKNK-RCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 317
Score = 74.4 bits (181), Expect = 1e-15
Identities = 37/206 (17%), Positives = 76/206 (36%), Gaps = 24/206 (11%)
Query: 71 ATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQ 130
+ + ++ + F H+ V V + + + S S D T+R++ + +
Sbjct: 117 VSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQ-DGTLIASCSNDQTVRVWVVATK 175
Query: 131 ESTKIFHSNTESVRDVEFNPHSPYA-------------------FASVSENGTIQQWDVR 171
E + V + + P S Y+ S S + TI+ WDV
Sbjct: 176 ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVS 235
Query: 172 RPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSR 231
C H + +H ++ + + DKT++VWD K ++ V+
Sbjct: 236 TG-MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTS 294
Query: 232 IKWRPQRKFHLASCSLVVDSSVNVWD 257
+ + ++ + S+ D +V VW+
Sbjct: 295 LDFHKTAP-YVVTGSV--DQTVKVWE 317
Score = 73.2 bits (178), Expect = 3e-15
Identities = 55/298 (18%), Positives = 104/298 (34%), Gaps = 71/298 (23%)
Query: 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYV------ 108
V + + + + + + + VW+ ER H +V +SF +
Sbjct: 21 TRVIFHP-VFSVMVSASEDATIKVWDY---ETGDFERTLKGHTDSVQDISFDHSGKLLAS 76
Query: 109 -----------------------------------ESNWLISGSQDGTMRLFDIRCQEST 133
+ ++S S+D T+++++++
Sbjct: 77 CSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV 136
Query: 134 KIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWH 193
K F + E VR V N AS S + T++ W V +C + H + W
Sbjct: 137 KTFTGHREWVRMVRPNQDGTL-IASCSNDQTVRVWVVATK-ECKAELREHRHVVECISWA 194
Query: 194 PEHAWLA--------------------TASRDKTIKVWDLSIKPSLEYSINTIASVSRIK 233
PE ++ + + SRDKTIK+WD+S L + V +
Sbjct: 195 PESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVL 254
Query: 234 WRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+ KF + SC+ D ++ VWD + + + H+ V+ L + + S
Sbjct: 255 FHSGGKF-ILSCAD--DKTLRVWDYKNKR-CMKTLNAHEHFVTSLDFHKTAPYVVTGS 308
Score = 67.8 bits (164), Expect = 2e-13
Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 7/213 (3%)
Query: 84 ISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESV 143
I R ++ + H+ V +V FH + ++S S+D T++++D + + +T+SV
Sbjct: 4 IPRPPEKYALSGHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSV 62
Query: 144 RDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATAS 203
+D+ F+ + + +C H + + P + +AS
Sbjct: 63 QDISFDHSGKLLA--SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS 120
Query: 204 RDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYI 263
RDKTIK+W++ ++ V ++ +ASCS D +V VW +
Sbjct: 121 RDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTL-IASCSN--DQTVRVWVVATKE- 176
Query: 264 PLASFTEHKDVVSGLAWRGDPQLFIASSRVSII 296
A EH+ VV ++W + S
Sbjct: 177 CKAELREHRHVVECISWAPESSYSSISEATGSE 209
Score = 54.0 bits (128), Expect = 7e-09
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 168 WDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLS 214
W R PEK Y + H P+ +HP + + +AS D TIKVWD
Sbjct: 3 WIPRPPEK--YALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYE 47
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 79.1 bits (193), Expect = 4e-17
Identities = 35/183 (19%), Positives = 66/183 (36%), Gaps = 25/183 (13%)
Query: 53 SCNDVAWSCIEENHIATGATNGAVVVWNLG----QISRSKQERVFNDHKRTVNKVSFHYV 108
VA S + +IA G+ + AV VW+ + HK +V V F
Sbjct: 206 GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR- 264
Query: 109 ESNWLISGSQDGTMRLFDIRCQESTKIFHS------------NTESVRDVEFNPHSPYAF 156
+ ++SGS D +++L++++ + + + + V V + Y
Sbjct: 265 DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEY-I 323
Query: 157 ASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACD------WHPEHAWLATASRDKTIKV 210
S S++ + WD + H + + PE+ AT S D ++
Sbjct: 324 LSGSKDRGVLFWDKKSG-NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARI 382
Query: 211 WDL 213
W
Sbjct: 383 WKY 385
Score = 71.4 bits (173), Expect = 2e-14
Identities = 27/180 (15%), Positives = 61/180 (33%), Gaps = 28/180 (15%)
Query: 105 FHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSN-------TESVRDVEFNPHSPYAFA 157
+ ++ +GS D +R++D + S +SV V F
Sbjct: 212 VSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQS-VV 270
Query: 158 SVSENGTIQQWDVRRPEKCFYQFTAHS-----------GPIFACDWHPEHAWLATASRDK 206
S S + +++ W+++ T +S + + ++ + S+D+
Sbjct: 271 SGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDR 330
Query: 207 TIKVWDLSIKPSL------EYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
+ WD L S+ ++A + P+ A+ S D +W ++
Sbjct: 331 GVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNV-FATGSG--DCKARIWKYKK 387
Score = 60.2 bits (144), Expect = 7e-11
Identities = 40/260 (15%), Positives = 83/260 (31%), Gaps = 26/260 (10%)
Query: 38 ETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHK 97
+ NL + + + V +S + +ATGA + + ++ V
Sbjct: 108 DPENLNTSSSPSSDLYIRSVCFSP-DGKFLATGAED-----RLIRIWDIENRKIVMILQG 161
Query: 98 RTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFA 157
+ S Y S + + S + V V +P A
Sbjct: 162 HEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIA 221
Query: 158 SVSENGTIQQWDVRRPEKCF------YQFTAHSGPIFACDWHPEHAWLATASRDKTIKVW 211
+ S + ++ WD T H +++ + + + + S D+++K+W
Sbjct: 222 AGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 281
Query: 212 DLSIKPSLEYSINTIASVSRIKWRPQRKF-----------HLASCSLVVDSSVNVWDIRR 260
+L + S + + + + F ++ S S D V WD +
Sbjct: 282 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSK--DRGVLFWDKKS 339
Query: 261 PYIPLASFTEHKDVVSGLAW 280
PL H++ V +A
Sbjct: 340 GN-PLLMLQGHRNSVISVAV 358
Score = 54.4 bits (129), Expect = 7e-09
Identities = 54/256 (21%), Positives = 98/256 (38%), Gaps = 32/256 (12%)
Query: 66 HIATGATNGAVVVWNLGQISRSKQE-RVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
TN +++N E DH V V F + +L +G + T ++
Sbjct: 30 DALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSN-DGEYLATGC-NKTTQV 87
Query: 125 FDIRCQE------------------STKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQ 166
+ + +T S+ +R V F+P + A+ +E+ I+
Sbjct: 88 YRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKF-LATGAEDRLIR 146
Query: 167 QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTI 226
WD K H I++ D+ P L + S D+T+++WDL +++
Sbjct: 147 IWD-IENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQC-SLTLSIE 204
Query: 227 ASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYI------PLASFTEHKDVVSGLAW 280
V+ + P ++A+ SL D +V VWD ++ S T HKD V + +
Sbjct: 205 DGVTTVAVSPGDGKYIAAGSL--DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVF 262
Query: 281 RGDPQLFIASSRVSII 296
D Q ++ S +
Sbjct: 263 TRDGQSVVSGSLDRSV 278
Score = 53.3 bits (126), Expect = 1e-08
Identities = 27/163 (16%), Positives = 58/163 (35%), Gaps = 16/163 (9%)
Query: 24 NVFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQ 83
+++ + VE + S V ++ + + +G+ + +V +WNL
Sbjct: 227 RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQN 285
Query: 84 ISRS---------KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTK 134
+ E + HK V V+ +++SGS+D + +D +
Sbjct: 286 ANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLL 344
Query: 135 IFHSNTESVRDVEFNPHSPYA-----FASVSENGTIQQWDVRR 172
+ + SV V S FA+ S + + W ++
Sbjct: 345 MLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387
Score = 35.2 bits (79), Expect = 0.008
Identities = 11/72 (15%), Positives = 28/72 (38%), Gaps = 4/72 (5%)
Query: 146 VEFNPHSPYAFASVSENGTIQQWD---VRRPEKCFYQFTAHSGPIFACDWHPEHAWLATA 202
++ + S N ++ R + ++ H+ + + + +LAT
Sbjct: 21 LDLDSQSVPDALKKQTNDYYILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATG 80
Query: 203 SRDKTIKVWDLS 214
+KT +V+ +S
Sbjct: 81 C-NKTTQVYRVS 91
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 74.9 bits (182), Expect = 9e-16
Identities = 30/174 (17%), Positives = 66/174 (37%), Gaps = 14/174 (8%)
Query: 50 LNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVE 109
L N V + H+ +G+ + ++ VW++ H+ + +
Sbjct: 173 LQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDV---ETGNCIHTLTGHQSLTSGMELK--- 226
Query: 110 SNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
N L+SG+ D T++++DI+ + + + V + + S++GT++ WD
Sbjct: 227 DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWD 286
Query: 170 VRRPEK----CFYQFTAHSGPIFACDWHPEHAWLATASRDKT----IKVWDLSI 215
++ E + G ++ A SR+ T + V D +
Sbjct: 287 LKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 340
Score = 54.0 bits (128), Expect = 7e-09
Identities = 46/276 (16%), Positives = 95/276 (34%), Gaps = 53/276 (19%)
Query: 55 NDVAWSCIE--ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFH------ 106
+D +C++ N I +G+ + + VW+ K R H V
Sbjct: 16 DDHVITCLQFCGNRIVSGSDDNTLKVWSA---VTGKCLRTLVGHTGGVWSSQMRDNIIIS 72
Query: 107 -------------------------------YVESNWLISGSQDGTMRLFDIRCQESTKI 135
++ ++SGS+D T+R++DI + +
Sbjct: 73 GSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHV 132
Query: 136 FHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPE 195
+ +VR + S + + ++ WD C + H+ +++ +
Sbjct: 133 LMGHVAAVR---CVQYDGRRVVSGAYDFMVKVWDPETE-TCLHTLQGHTNRVYSLQFDGI 188
Query: 196 HAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNV 255
H + + S D +I+VWD+ + + S ++ + L S DS+V +
Sbjct: 189 H--VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN---ILVSG--NADSTVKI 241
Query: 256 WDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
WDI+ +K + + + I SS
Sbjct: 242 WDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSS 277
Score = 50.6 bits (119), Expect = 1e-07
Identities = 43/215 (20%), Positives = 77/215 (35%), Gaps = 21/215 (9%)
Query: 79 WNLGQISRSKQERVFNDHKRTVNK-VSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFH 137
W G++ K +V H V + F N ++SGS D T++++ + +
Sbjct: 1 WRRGEL---KSPKVLKGHDDHVITCLQFC---GNRIVSGSDDNTLKVWSAVTGKCLRTLV 54
Query: 138 SNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHA 197
+T V + + T + V E T + H
Sbjct: 55 GHTGGVWSSQMRDNIII------SGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEK 108
Query: 198 WLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWD 257
+ + SRD T++VWD+ L + +A+V +++ +R A D V VWD
Sbjct: 109 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAY-----DFMVKVWD 163
Query: 258 IRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSR 292
L + H + V L + D ++ S
Sbjct: 164 P-ETETCLHTLQGHTNRVYSLQF--DGIHVVSGSL 195
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 74.4 bits (181), Expect = 1e-15
Identities = 28/154 (18%), Positives = 53/154 (34%), Gaps = 5/154 (3%)
Query: 105 FHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGT 164
++ +SG+ D + +L+D+R + F + + + F P+ FA+ S++ T
Sbjct: 191 SLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA-FATGSDDAT 249
Query: 165 IQ-QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSI 223
+ E Y I + + L D VWD
Sbjct: 250 CRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLA 309
Query: 224 NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWD 257
VS + +A+ S DS + +W+
Sbjct: 310 GHDNRVSCLGVTDDGM-AVATGSW--DSFLKIWN 340
Score = 70.5 bits (171), Expect = 3e-14
Identities = 45/190 (23%), Positives = 72/190 (37%), Gaps = 8/190 (4%)
Query: 105 FHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGT 164
+++ N +++ S D T L+DI + T F +T V + P + F S + + +
Sbjct: 149 CRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRL-FVSGACDAS 207
Query: 165 IQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKV--WDLSIKPSLEYS 222
+ WDVR C FT H I A + P AT S D T ++ +
Sbjct: 208 AKLWDVREG-MCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSH 266
Query: 223 INTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRG 282
N I ++ + + + LA D + NVWD + H + VS L
Sbjct: 267 DNIICGITSVSFSKSGRLLLAGYD---DFNCNVWDALKAD-RAGVLAGHDNRVSCLGVTD 322
Query: 283 DPQLFIASSR 292
D S
Sbjct: 323 DGMAVATGSW 332
Score = 63.2 bits (152), Expect = 7e-12
Identities = 36/210 (17%), Positives = 72/210 (34%), Gaps = 6/210 (2%)
Query: 88 KQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVE 147
+ R H + + + +S L+S SQDG + ++D + V
Sbjct: 46 RTRRTLRGHLAKIYAMHWGT-DSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCA 104
Query: 148 FNPHSPYAFASVSEN-GTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDK 206
+ P Y +N +I R + A +C + + T+S D
Sbjct: 105 YAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDT 164
Query: 207 TIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLA 266
T +WD+ V + P + ++ D+S +WD+R +
Sbjct: 165 TCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGAC---DASAKLWDVREG-MCRQ 220
Query: 267 SFTEHKDVVSGLAWRGDPQLFIASSRVSII 296
+FT H+ ++ + + + F S +
Sbjct: 221 TFTGHESDINAICFFPNGNAFATGSDDATC 250
Score = 40.9 bits (94), Expect = 1e-04
Identities = 16/101 (15%), Positives = 29/101 (28%)
Query: 171 RRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVS 230
R + H I+A W + L +AS+D + +WD + + V
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVM 101
Query: 231 RIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEH 271
+ P + + S N+ H
Sbjct: 102 TCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGH 142
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 66.0 bits (159), Expect = 6e-13
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 19/172 (11%)
Query: 49 NLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYV 108
L V ++ +I + + + + VWN S + R N HKR + + +
Sbjct: 133 VLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNT---STCEFVRTLNGHKRGIACLQYR-- 187
Query: 109 ESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQW 168
++SGS D T+RL+DI C ++ + E VR S + +G I+ W
Sbjct: 188 -DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR---CIRFDNKRIVSGAYDGKIKVW 243
Query: 169 DVRRPE--------KCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
D+ C HSG +F + + ++S D TI +WD
Sbjct: 244 DLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEF--QIVSSSHDDTILIWD 293
Score = 57.2 bits (136), Expect = 6e-10
Identities = 38/272 (13%), Positives = 81/272 (29%), Gaps = 58/272 (21%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYV---------------- 108
I +G + + +W+ + + +R+ H +V + +
Sbjct: 26 QKIVSGLRDNTIKIWD---KNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDV 82
Query: 109 ---------------------ESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVE 147
+ +++ S+D ++ ++D+ + V
Sbjct: 83 NTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVN 142
Query: 148 FNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKT 207
S S + TI+ W+ + H I + + + S D T
Sbjct: 143 VVDFDDKYIVSASGDRTIKVWNTSTC-EFVRTLNGHKRGIACLQYRDR--LVVSGSSDNT 199
Query: 208 IKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIR-------- 259
I++WD+ + + R R + S D + VWD+
Sbjct: 200 IRLWDIE-----CGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAP 254
Query: 260 RPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+ L + EH V L + D ++SS
Sbjct: 255 AGTLCLRTLVEHSGRVFRLQF--DEFQIVSSS 284
Score = 55.6 bits (132), Expect = 2e-09
Identities = 38/213 (17%), Positives = 76/213 (35%), Gaps = 23/213 (10%)
Query: 54 CNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWL 113
C V + T + + ++ VW++ + RV H+ VN V F ++
Sbjct: 95 CEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDD---KYI 151
Query: 114 ISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRP 173
+S S D T+++++ E + + + + + S S + TI+ WD+
Sbjct: 152 VSASGDRTIKVWNTSTCEFVRTLNGHKRGIA---CLQYRDRLVVSGSSDNTIRLWDIE-- 206
Query: 174 EKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTI------- 226
++ + + + D IKVWDL T+
Sbjct: 207 -CGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVE 265
Query: 227 --ASVSRIKWRPQRKFHLASCSLVVDSSVNVWD 257
V R+++ + S S D ++ +WD
Sbjct: 266 HSGRVFRLQFDEF---QIVSSSH--DDTILIWD 293
Score = 51.8 bits (122), Expect = 3e-08
Identities = 29/193 (15%), Positives = 69/193 (35%), Gaps = 12/193 (6%)
Query: 91 RVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNP 150
++ + V + + ++SG +D T++++D E +I +T SV ++++
Sbjct: 9 HCRSETSKGVYCLQYD---DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDE 65
Query: 151 HSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKV 210
+ V T + + T S+D++I V
Sbjct: 66 RVII------TGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAV 119
Query: 211 WDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTE 270
WD++ + + + + ++ S S D ++ VW+ + +
Sbjct: 120 WDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASG--DRTIKVWNTSTCE-FVRTLNG 176
Query: 271 HKDVVSGLAWRGD 283
HK ++ L +R
Sbjct: 177 HKRGIACLQYRDR 189
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 61.0 bits (146), Expect = 4e-11
Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 3/79 (3%)
Query: 136 FHS-NTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPE-KCFYQFTAHSGPIFACDWH 193
+HS E + +N A N + ++ + ++ H+G + DW
Sbjct: 2 YHSFLVEPISCHAWNKDRTQ-IAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWA 60
Query: 194 PEHAWLATASRDKTIKVWD 212
P+ + T D+ VW
Sbjct: 61 PDSNRIVTCGTDRNAYVWT 79
Score = 59.9 bits (143), Expect = 1e-10
Identities = 28/191 (14%), Positives = 56/191 (29%), Gaps = 7/191 (3%)
Query: 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLI 114
+ AW+ + IA N V ++ ++ Q +H V V + +SN ++
Sbjct: 11 SCHAWNK-DRTQIAICPNNHEVHIYEK-SGNKWVQVHELKEHNGQVTGVDWAP-DSNRIV 67
Query: 115 SGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVS-ENGTIQQWDV--- 170
+ D ++ ++ + + +V + I
Sbjct: 68 TCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE 127
Query: 171 RRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVS 230
C + + + DWHP LA S D +++ IK E T
Sbjct: 128 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSK 187
Query: 231 RIKWRPQRKFH 241
+
Sbjct: 188 MPFGELMFESS 198
Score = 50.2 bits (118), Expect = 1e-07
Identities = 13/164 (7%), Positives = 43/164 (26%), Gaps = 6/164 (3%)
Query: 100 VNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKI--FHSNTESVRDVEFNPHSPYAFA 157
++ +++ + + + + +++ + ++ + V V++ P S
Sbjct: 10 ISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNR-IV 67
Query: 158 SVSENGTIQQWDVRRPE-KCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL-SI 215
+ + W ++ K + W P A S + I +
Sbjct: 68 TCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQE 127
Query: 216 KPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIR 259
S + + + D ++
Sbjct: 128 NDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAY 171
Score = 45.2 bits (105), Expect = 5e-06
Identities = 14/165 (8%), Positives = 37/165 (22%), Gaps = 22/165 (13%)
Query: 59 WSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQ 118
+ +A + + V + + + ++ + L++
Sbjct: 208 CFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLA-----VTFITESSLVAAGH 262
Query: 119 DGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR-----RP 173
D LF F + + + ++ Q D +
Sbjct: 263 DCFPVLFTYDSAAGKLSFGGRLDVPKQS--------SQRGLTARERFQNLDKKASSEGSA 314
Query: 174 EKCFYQFTAHSGPIFACDWHPEHAW----LATASRDKTIKVWDLS 214
+ H + T D + +WD+
Sbjct: 315 AAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 359
Score = 45.2 bits (105), Expect = 6e-06
Identities = 12/84 (14%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 181 TAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINT--IASVSRIKWRPQR 238
+ PI W+ + +A + + +++ S ++ V+ + W P
Sbjct: 4 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDS 63
Query: 239 KFHLASCSLVVDSSVNVWDIRRPY 262
+ +C D + VW ++
Sbjct: 64 N-RIVTCG--TDRNAYVWTLKGRT 84
Score = 39.5 bits (90), Expect = 4e-04
Identities = 27/193 (13%), Positives = 56/193 (29%), Gaps = 8/193 (4%)
Query: 78 VWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFH 137
++ + + V+ V F + + S D T+ L D + +
Sbjct: 182 TPWGSKMPFGELMFESSSSCGWVHGVCFSANG-SRVAWVSHDSTVCLADADKKMAVATLA 240
Query: 138 SNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHA 197
S T + V F S A + +D F A
Sbjct: 241 SETLPLLAVTFITESSLVAAGHDCFPVLFTYD---SAAGKLSFGGRLDVPKQSSQRGLTA 297
Query: 198 WLATASRDKTIKVWDLSIKPSLEYSI--NTIASVSRIKWRPQRKFHLASCSLVVDSSVNV 255
+ DK + + S+ N+++ +S + + + + D +++
Sbjct: 298 RERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGM--DGGMSI 355
Query: 256 WDIRRPYIPLASF 268
WD+R L
Sbjct: 356 WDVRSLESALKDL 368
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 60.6 bits (145), Expect = 4e-11
Identities = 16/121 (13%), Positives = 39/121 (32%), Gaps = 5/121 (4%)
Query: 93 FNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHS 152
+D + + + + L + + H + ++F
Sbjct: 220 QHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCV--LSLKFAYCG 277
Query: 153 PYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
+ F S ++ + W F + S + +CD + ++ T S DK V++
Sbjct: 278 KW-FVSTGKDNLLNAWRTPYGASIFQ--SKESSSVLSCDISVDDKYIVTGSGDKKATVYE 334
Query: 213 L 213
+
Sbjct: 335 V 335
Score = 52.5 bits (124), Expect = 2e-08
Identities = 21/208 (10%), Positives = 56/208 (26%), Gaps = 8/208 (3%)
Query: 51 NFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVES 110
+ + A + + + + ++ +
Sbjct: 136 ELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDG 195
Query: 111 NWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDV 170
L +G D T+R + H T + + + P + + + +
Sbjct: 196 TKLWTGGLDNTVR-SWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESS---NVEVL 251
Query: 171 RRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVS 230
+ YQ H + + + W + +D + W + + +SV
Sbjct: 252 HVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTP-YGASIFQSKESSSVL 310
Query: 231 RIKWRPQRKFHLASCSLVVDSSVNVWDI 258
K ++ + S D V+++
Sbjct: 311 SCDISVDDK-YIVTGSG--DKKATVYEV 335
Score = 40.6 bits (93), Expect = 2e-04
Identities = 30/239 (12%), Positives = 67/239 (28%), Gaps = 11/239 (4%)
Query: 55 NDVAWSCIEENHIATGATNGAVVVWNL--GQISRSKQERVFNDHKRTVNKVSFHYVESNW 112
V S H+ TG G V VW++ + + + +
Sbjct: 55 CAVTISN-PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLL-PDGCT 111
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR 172
LI G + T+ ++D+ + + +
Sbjct: 112 LIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLH 171
Query: 173 PEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRI 232
+ QF H+ D + L T D T++ WD + + + + +
Sbjct: 172 NQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWD-LREGRQLQQHDFTSQIFSL 230
Query: 233 KWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
+ P ++ ++V + H+ V L + + F+++
Sbjct: 231 GYCPTGEWLAVGMESSNVEVLHVNKPDKYQ-----LHLHESCVLSLKFAYCGKWFVSTG 284
Score = 37.1 bits (84), Expect = 0.002
Identities = 13/76 (17%), Positives = 24/76 (31%), Gaps = 6/76 (7%)
Query: 140 TESVRDVEFNPHSPYAFASVSENGTIQQWDVRRP----EKCFYQFTAHSGPIFACDWHPE 195
E V V + + + + G ++ WD+ P I +C P+
Sbjct: 51 GEVVCAVTISNPTRH-VYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPD 108
Query: 196 HAWLATASRDKTIKVW 211
L T+ +W
Sbjct: 109 GCTLIVGGEASTLSIW 124
Score = 35.2 bits (79), Expect = 0.008
Identities = 10/57 (17%), Positives = 16/57 (28%), Gaps = 3/57 (5%)
Query: 158 SVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLS 214
+ I R + H + A + T +KVWD+S
Sbjct: 27 PFPPDALIGPGIPRHARQINT--LNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDIS 80
Score = 34.8 bits (78), Expect = 0.012
Identities = 14/120 (11%), Positives = 30/120 (25%), Gaps = 8/120 (6%)
Query: 177 FYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRP 236
++Q S P ++ + + + ++N V +
Sbjct: 2 YFQGAMGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLNHGEVVCAVTISN 61
Query: 237 QRKFHLASCSLVVDSSVNVWDIRRPY----IPLASFTEHKDVVSGLAWRGDPQLFIASSR 292
+ H+ + V VWDI P + + + D I
Sbjct: 62 PTR-HVYTGG---KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE 117
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 58.4 bits (139), Expect = 2e-10
Identities = 20/108 (18%), Positives = 34/108 (31%), Gaps = 1/108 (0%)
Query: 105 FHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGT 164
V L+ Q ++ + S S + + A+ S +
Sbjct: 179 AGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTN 238
Query: 165 IQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
I + V+RP K AH + W L ++ D IK W+
Sbjct: 239 IFIYSVKRPMKIIKALNAHKDGVNNLLWETPS-TLVSSGADACIKRWN 285
Score = 43.0 bits (99), Expect = 3e-05
Identities = 15/77 (19%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 51 NFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVES 110
+ IEE+ +ATG+ + + ++++ K + N HK VN + +
Sbjct: 214 KPAEKGANEEEIEEDLVATGSLDTNIFIYSVK--RPMKIIKALNAHKDGVNNLLWE--TP 269
Query: 111 NWLISGSQDGTMRLFDI 127
+ L+S D ++ +++
Sbjct: 270 STLVSSGADACIKRWNV 286
Score = 41.5 bits (95), Expect = 6e-05
Identities = 10/41 (24%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Query: 174 EKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLS 214
++ + H+ I A +P L + S D I W S
Sbjct: 3 DEVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSS 39
Score = 40.7 bits (93), Expect = 1e-04
Identities = 31/261 (11%), Positives = 77/261 (29%), Gaps = 29/261 (11%)
Query: 60 SCIEENHIATGATNGAVVVWNLGQISRSKQERV----FNDHKRTVNKVSFHYVESNWLIS 115
+ + N + +G+ +G ++ W+ + + + + + + ++ N +
Sbjct: 17 TALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITK 76
Query: 116 GSQDGTMRLFDIR-----------------CQESTKIFHSNTESVRDVEFNPHSPYAFAS 158
++ + I S + + Y
Sbjct: 77 HEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVG 136
Query: 159 VSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPS 218
+ E TIQ + + E F T P ++A I ++DL +
Sbjct: 137 LEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREV 196
Query: 219 LEYSINTIASVSRIKWRPQRKFHLASCSLV--------VDSSVNVWDIRRPYIPLASFTE 270
S + + +D+++ ++ ++RP + +
Sbjct: 197 KTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNA 256
Query: 271 HKDVVSGLAWRGDPQLFIASS 291
HKD V+ L W L + +
Sbjct: 257 HKDGVNNLLWETPSTLVSSGA 277
Score = 40.3 bits (92), Expect = 2e-04
Identities = 12/79 (15%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 93 FNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR-CQESTKIFHSNTESVRDVEFNPH 151
K + +E + + +GS D + ++ ++ + K +++ + V ++ +
Sbjct: 210 AISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP 269
Query: 152 SPYAFASVSENGTIQQWDV 170
S S + I++W+V
Sbjct: 270 S--TLVSSGADACIKRWNV 286
Score = 39.2 bits (89), Expect = 4e-04
Identities = 20/167 (11%), Positives = 54/167 (32%), Gaps = 10/167 (5%)
Query: 91 RVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNP 150
+ + H + + ++ + LISGS DG + + + + ++ + ++ +
Sbjct: 7 KTISGHNKGITALTVNP-----LISGSYDGRIMEWSS-----SSMHQDHSNLIVSLDNSK 56
Query: 151 HSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKV 210
Y+ S + + +A++ A + + + + IK
Sbjct: 57 AQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKS 116
Query: 211 WDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWD 257
L+ S +V + + F L+ + D +
Sbjct: 117 VRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRA 163
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 55.7 bits (132), Expect = 2e-09
Identities = 21/158 (13%), Positives = 51/158 (32%), Gaps = 5/158 (3%)
Query: 89 QERVFNDHKRTVNK-VSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVE 147
Q H +V + F N++I+G+ D +R++D ++ + V ++
Sbjct: 4 QRTTLRGHMTSVITCLQFE---DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALK 60
Query: 148 FNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKT 207
+ S ++ + ++ + + ++ T SRD T
Sbjct: 61 YAHGGILVSGS-TDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNT 119
Query: 208 IKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASC 245
+ VW L + S+ + + +
Sbjct: 120 LHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVL 157
Score = 46.0 bits (107), Expect = 3e-06
Identities = 11/93 (11%), Positives = 32/93 (34%), Gaps = 2/93 (2%)
Query: 122 MRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFT 181
+ + ++ F + ++ + S S SEN +++R +
Sbjct: 263 GSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSEN-QFNIYNLRSGKLVHANIL 321
Query: 182 AHSGPIFACDWHPEHAWLATASRDKTIKVWDLS 214
+ I++ ++ + +A +D + L
Sbjct: 322 KDADQIWSVNFKGKTL-VAAVEKDGQSFLEILD 353
Score = 43.7 bits (101), Expect = 2e-05
Identities = 28/146 (19%), Positives = 60/146 (41%), Gaps = 8/146 (5%)
Query: 59 WSCI--EENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISG 116
+C+ E+N++ TGA + + V++ K + H V + + L+SG
Sbjct: 16 ITCLQFEDNYVITGADDKMIRVYDS---INKKFLLQLSGHDGGVWALKYA--HGGILVSG 70
Query: 117 SQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAF-ASVSENGTIQQWDVRRPEK 175
S D T+R++DI+ T +F + +VR ++ + + + S + T+ W + +
Sbjct: 71 STDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESS 130
Query: 176 CFYQFTAHSGPIFACDWHPEHAWLAT 201
H P+ ++
Sbjct: 131 VPDHGEEHDYPLVFHTPEENPYFVGV 156
Score = 41.0 bits (94), Expect = 1e-04
Identities = 11/105 (10%), Positives = 39/105 (37%), Gaps = 3/105 (2%)
Query: 156 FASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSI 215
+ +++ I+ +D +K Q + H G ++A + ++ ++
Sbjct: 26 VITGADDKMIRVYDSIN-KKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKG 84
Query: 216 KPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
+ + + + ++ + S D++++VW + +
Sbjct: 85 CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSR--DNTLHVWKLPK 127
Score = 39.1 bits (89), Expect = 5e-04
Identities = 27/233 (11%), Positives = 65/233 (27%), Gaps = 12/233 (5%)
Query: 59 WSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQ 118
W +E+ + + V H +V N ++SGS
Sbjct: 123 WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVR---TVSGHGNIVVSGSY 179
Query: 119 DGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFY 178
D T+ ++D+ + I +T+ + ++ +R +
Sbjct: 180 DNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCI------SASMDTTIRIWDLENG 233
Query: 179 QFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQR 238
+ A + S + ++S I
Sbjct: 234 ELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVS 293
Query: 239 KFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
L S S ++ N++++R + A+ + D + + ++G +
Sbjct: 294 DNILVSGS---ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAVEK 343
Score = 33.7 bits (75), Expect = 0.026
Identities = 9/95 (9%), Positives = 28/95 (29%), Gaps = 3/95 (3%)
Query: 164 TIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL-SIKPSLEYS 222
+F+ H + A + + + +++L S K
Sbjct: 261 ADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANI 320
Query: 223 INTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWD 257
+ + + ++ + +A+ S + + D
Sbjct: 321 LKDADQIWSVNFKGKTL--VAAVEKDGQSFLEILD 353
Score = 30.2 bits (66), Expect = 0.29
Identities = 9/51 (17%), Positives = 18/51 (35%), Gaps = 3/51 (5%)
Query: 241 HLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASS 291
++ + + D + V+D L + H V L + L S+
Sbjct: 25 YVITGAD--DKMIRVYDSINKK-FLLQLSGHDGGVWALKYAHGGILVSGST 72
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 54.5 bits (129), Expect = 6e-09
Identities = 36/294 (12%), Positives = 78/294 (26%), Gaps = 41/294 (13%)
Query: 61 CIEENHIATGATNGAVVVWN---------LGQISRSKQERVFNDHKRTVNKVSFHYVESN 111
+ + + +G + VW+ + + H + + E
Sbjct: 21 SACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELC 80
Query: 112 WLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYA--------------FA 157
+ + S G + + I ++ TK + D + HS +A
Sbjct: 81 LVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLV 140
Query: 158 SVSENGTIQQWDVRRPEKCFYQFTAHSGP-----------------IFACDWHPEHAWLA 200
+ GT W T + P + D +A
Sbjct: 141 ATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIA 199
Query: 201 TASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRR 260
T + T+++ +LS L + + ++ KF L + N +
Sbjct: 200 TGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCIT 259
Query: 261 PYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIKIFIASSRVSII 314
Y V + + F SS V + + + ++ +
Sbjct: 260 LYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKL 313
Score = 47.2 bits (110), Expect = 1e-06
Identities = 15/92 (16%), Positives = 30/92 (32%), Gaps = 16/92 (17%)
Query: 182 AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSI------------KPSLEYSINTIASV 229
AH IF+ + + S D +KVWD + + ++ + +
Sbjct: 12 AHDADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69
Query: 230 SRIKWRPQRKFHLASCSLVVDSSVNVWDIRRP 261
I+ +A+ S + + I R
Sbjct: 70 QAIERDAFELCLVATTSF--SGDLLFYRITRE 99
Score = 41.8 bits (96), Expect = 8e-05
Identities = 29/278 (10%), Positives = 79/278 (28%), Gaps = 56/278 (20%)
Query: 53 SCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFND-------HKRTVNKVSF 105
+ E +AT + +G ++ + + + +K+ K + + +
Sbjct: 68 VLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKW 127
Query: 106 H----YVESNWLISGSQDGTMRLFDI------------------RCQESTKIFHSNTESV 143
+ S+ L++ GT ++ Q + + + ++
Sbjct: 128 GASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFA 187
Query: 144 RDVEFNPHSPYAFASVSENGTIQ-----QWDVRRPEKCFYQFTAHSGPIFACDWHPEHAW 198
V+ + A+ NGT+Q + + +S I + + P+ +
Sbjct: 188 TSVDISERG--LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSL 245
Query: 199 LATASRDKTIKVW----------------DLSIKPSLEYSINTIASVSRIKWRPQRKFHL 242
LA A + + + V + + +
Sbjct: 246 LAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLC 305
Query: 243 ASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAW 280
++ D + WD++ + + H D +
Sbjct: 306 SAGW---DGKLRFWDVKT-KERITTLNMHCDDIEIEED 339
Score = 39.1 bits (89), Expect = 5e-04
Identities = 35/292 (11%), Positives = 83/292 (28%), Gaps = 43/292 (14%)
Query: 25 VFKIFLIKDTEFVETHNLRVGKNINLNFSCNDVAWS----CIEENHIATGATNGAVVVWN 80
++I +T+ V L + + S + W + + + G +W
Sbjct: 93 FYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWK 152
Query: 81 LGQISRSKQERVFN---------------DHKRTVNKVSFHYVESNWLISGSQDGTMRLF 125
+ N + V E + +G +GT+++
Sbjct: 153 FHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDIS--ERGLIATGFNNGTVQIS 210
Query: 126 DIRCQESTKIFHS------NTESVRDVEFNPHSPYAFASVSENGTI--QQWDVR------ 171
++ F S N+ S+R V+F+P + N ++
Sbjct: 211 ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIG 270
Query: 172 ------RPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINT 225
+ AHS + + ++ L +A D ++ WD+ K +
Sbjct: 271 SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMH 330
Query: 226 IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSG 277
+ + SL +V +++ + ++ +
Sbjct: 331 CDDIEIEEDIL--AVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCV 380
Score = 33.3 bits (74), Expect = 0.037
Identities = 22/127 (17%), Positives = 45/127 (35%), Gaps = 14/127 (11%)
Query: 85 SRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVR 144
S+ H V +SF+ L S DG +R +D++ +E + + + +
Sbjct: 277 HSSQASLGEFAHSSWVMSLSFND-SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIE 335
Query: 145 DVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASR 204
E S++E G +DV+ +K + + L
Sbjct: 336 IEEDILAVDEHGDSLAEPGV---FDVKFLKKG----------WRSGMGADLNESLCCVCL 382
Query: 205 DKTIKVW 211
D++I+ +
Sbjct: 383 DRSIRWF 389
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 51.0 bits (120), Expect = 7e-08
Identities = 16/176 (9%), Positives = 46/176 (26%), Gaps = 15/176 (8%)
Query: 59 WSCIEENHIATGATNGAVVVWNLGQIS----RSKQERVFNDHKRTVNKVSFHY-----VE 109
+ ++ + + ++ + V + N
Sbjct: 185 AFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEA 244
Query: 110 SNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWD 169
+ ++ + + I ++ + V + + E G + ++D
Sbjct: 245 GEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYD 304
Query: 170 VRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINT 225
V+ + T + + + D I + L KP E ++ T
Sbjct: 305 VKTRKV-----TEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLE-KPEDERTVET 354
Score = 39.8 bits (91), Expect = 3e-04
Identities = 19/213 (8%), Positives = 49/213 (23%), Gaps = 3/213 (1%)
Query: 55 NDVAWSCIEENHIATGATNGAVV-VWNL--GQISRSKQERVFNDHKRTVNKVSFHYVESN 111
V + G G + +++ G+ + ++ F V ++
Sbjct: 46 RYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVAND 105
Query: 112 WLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR 171
+ D + + + T S P
Sbjct: 106 RFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYD 165
Query: 172 RPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSR 231
+ + T + +A + + L S D + ++ +
Sbjct: 166 MEGRKIFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPL 225
Query: 232 IKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIP 264
I P + ++ D+ + P
Sbjct: 226 IPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSP 258
Score = 30.6 bits (67), Expect = 0.26
Identities = 10/71 (14%), Positives = 16/71 (22%), Gaps = 6/71 (8%)
Query: 146 VEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRD 205
+F+P A VS G DV I +
Sbjct: 8 EDFSPLDGDLIAFVS-RGQAFIQDVSGTYV---LKVPEPLRIRYVRRGGDTKVAFIHGTR 63
Query: 206 --KTIKVWDLS 214
+ ++D
Sbjct: 64 EGDFLGIYDYR 74
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 50.0 bits (117), Expect = 2e-07
Identities = 12/111 (10%), Positives = 32/111 (28%), Gaps = 1/111 (0%)
Query: 105 FHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGT 164
+ S+ + + + + A+ S + +
Sbjct: 188 SNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNS 247
Query: 165 IQQWDVRRP-EKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLS 214
+ W++ +P + AH+ + +A +D IK W++
Sbjct: 248 VIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNVP 298
Score = 43.8 bits (101), Expect = 1e-05
Identities = 24/134 (17%), Positives = 46/134 (34%), Gaps = 7/134 (5%)
Query: 128 RCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPI 187
K E N + S +T H+ +
Sbjct: 168 ASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKV 227
Query: 188 FACDWHPEHAWLATASRDKTIKVWDL---SIKPSLEYSINTIASVSRIKWRPQRKFHLAS 244
W P++ LAT S D ++ VW++ S P + + ++SV+ + W + + S
Sbjct: 228 ACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNET--TIVS 285
Query: 245 CSLVVDSSVNVWDI 258
DS++ W++
Sbjct: 286 AGQ--DSNIKFWNV 297
Score = 43.8 bits (101), Expect = 1e-05
Identities = 9/40 (22%), Positives = 14/40 (35%)
Query: 175 KCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLS 214
H+ I A + L +A + I WD+S
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDIS 42
Score = 43.4 bits (100), Expect = 2e-05
Identities = 15/153 (9%), Positives = 40/153 (26%), Gaps = 2/153 (1%)
Query: 90 ERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIF-HSNTESVRDVEF 148
++V H + + +S + L S +G + +DI S ++F + + ++
Sbjct: 5 DQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKT 63
Query: 149 NPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTI 208
S ++ + + S + A
Sbjct: 64 TSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIA 123
Query: 209 KVWDLSIKPSLEYSINTIASVSRIKWRPQRKFH 241
+ ++ ++S K
Sbjct: 124 IYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQ 156
Score = 36.5 bits (82), Expect = 0.003
Identities = 10/80 (12%), Positives = 27/80 (33%), Gaps = 3/80 (3%)
Query: 93 FNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRC--QESTKIFHSNTESVRDVEFNP 150
++ L +GS D ++ ++++ I ++ S +
Sbjct: 219 SWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWL 278
Query: 151 HSPYAFASVSENGTIQQWDV 170
+ S ++ I+ W+V
Sbjct: 279 NETT-IVSAGQDSNIKFWNV 297
Score = 33.0 bits (73), Expect = 0.035
Identities = 27/277 (9%), Positives = 74/277 (26%), Gaps = 44/277 (15%)
Query: 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFND-HKRTVNKVSFHYVESNWL 113
++ S + + + G + W++ S RVF D H + + +
Sbjct: 16 TALSSSA-DGKTLFSADAEGHINSWDI---STGISNRVFPDVHATMITGIKTTSKGDLFT 71
Query: 114 ISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRR- 172
+S + +S+K + S + +
Sbjct: 72 VSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLT 131
Query: 173 ------------------------------------PEKCFYQFTAHSGPIFACDWHPEH 196
+ H I + +
Sbjct: 132 EVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNG 191
Query: 197 AWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVW 256
A+L + + + + ++ L ++ + +++ ++ + +D+SV VW
Sbjct: 192 AFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVW 251
Query: 257 DIRRPYIP--LASFTEHKDVVSGLAWRGDPQLFIASS 291
++ +P + V+ + W + + A
Sbjct: 252 NMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQ 288
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 49.5 bits (116), Expect = 2e-07
Identities = 30/191 (15%), Positives = 51/191 (26%), Gaps = 23/191 (12%)
Query: 54 CNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWL 113
N + + + G N V + L + K + V+ E
Sbjct: 150 KNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGY 209
Query: 114 ISGSQDGTMRLFD---------------IRCQESTKIFHSNTESVRDVEFNPHSPYAFAS 158
S DG + + RC + V +EF+P + +
Sbjct: 210 ACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKF-LYT 268
Query: 159 VSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVW-----DL 213
+G I W+++ K F L A+ D T K +
Sbjct: 269 AGSDGIISCWNLQT-RKKIKNFAKF-NEDSVVKIACSDNILCLATSDDTFKTNAAIDQTI 326
Query: 214 SIKPSLEYSIN 224
+ S Y I
Sbjct: 327 ELNASSIYIIF 337
Score = 49.1 bits (115), Expect = 3e-07
Identities = 16/124 (12%), Positives = 35/124 (28%), Gaps = 4/124 (3%)
Query: 91 RVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQEST---KIFHSNTESVRDVE 147
++ K ++ + + L+ S DG++ ++ Q +
Sbjct: 5 QIEQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCN 63
Query: 148 FNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKT 207
F ++ + G I + D+ + L AS D
Sbjct: 64 FIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGL 123
Query: 208 IKVW 211
I+V
Sbjct: 124 IEVI 127
Score = 48.3 bits (113), Expect = 6e-07
Identities = 10/79 (12%), Positives = 21/79 (26%), Gaps = 3/79 (3%)
Query: 182 AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSI---KPSLEYSINTIASVSRIKWRPQR 238
A I P + L S D ++ V+ I L S+ + +
Sbjct: 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNT 68
Query: 239 KFHLASCSLVVDSSVNVWD 257
+ ++ +
Sbjct: 69 DLQIYVGTVQGEILKVDLI 87
Score = 47.2 bits (110), Expect = 1e-06
Identities = 31/298 (10%), Positives = 80/298 (26%), Gaps = 26/298 (8%)
Query: 55 NDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLI 114
+D+ ++ + + +G++ V+ +++ +K + +F +
Sbjct: 15 SDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIY 73
Query: 115 SGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPE 174
G+ G + D+ S + +N ++ + + S +G I+ D R
Sbjct: 74 VGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYG 133
Query: 175 KCFYQFTAHSGPIFACDWHPEHAW-----LATASRDKTIKVWDL-SIKPSLEYSINTIAS 228
+ L + ++ + L + +
Sbjct: 134 DGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLK 193
Query: 229 VSRIKWRPQRKFHLASCSLVVDSSVNVWDIR--------------RPYIPLASFTEHKDV 274
K +D V V R + T
Sbjct: 194 YQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYP 253
Query: 275 VSGLAWRGDPQLFIASS-----RVSIIPRAKNIKIFIASSRVSIIPRAENIKIFITSS 327
V+ + + + + + K IK F + S++ A + I ++
Sbjct: 254 VNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIACSDNILCLAT 311
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 46.7 bits (110), Expect = 2e-06
Identities = 24/241 (9%), Positives = 62/241 (25%), Gaps = 19/241 (7%)
Query: 79 WNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWL-ISGSQDGTMRLFDIRCQESTKIFH 137
+ + ++ S + V + + + N ++ G + L D E +
Sbjct: 2 FGMKEMRESWK--VHVAPEDRPTQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLD 59
Query: 138 SNTESVRDVEFNPHSPYAFASVSENGTIQQWDV----RRPEKCFYQFTAHSGPIFACDWH 193
+ +V + Y F +G + D+ + +
Sbjct: 60 TG-YAVHISRLSASGRYLFVI-GRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEG 117
Query: 194 PEHAWL-ATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLASCS-----L 247
E + A A + D + + ++ P+ + S
Sbjct: 118 WEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEF 177
Query: 248 VV----DSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSIIPRAKNIK 303
+V + + D + + + G + FI ++ + K
Sbjct: 178 IVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTK 237
Query: 304 I 304
Sbjct: 238 E 238
Score = 40.2 bits (93), Expect = 3e-04
Identities = 20/189 (10%), Positives = 56/189 (29%), Gaps = 14/189 (7%)
Query: 36 FVETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNL--GQISRSKQERVF 93
++ + ++ ++ + S ++ +G V + +L + + + ++
Sbjct: 46 LIDGSTYEIKTVLDTGYAVHISRLS-ASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG 104
Query: 94 NDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHS- 152
++ + + + + + D E KI + + + E++P
Sbjct: 105 SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPR 164
Query: 153 ----------PYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATA 202
P +V E G I D + + H + TA
Sbjct: 165 VAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITA 224
Query: 203 SRDKTIKVW 211
+ + V
Sbjct: 225 ANARNKLVV 233
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 43.8 bits (101), Expect = 1e-05
Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 1/77 (1%)
Query: 51 NFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVES 110
A S ++ AT + + VW++ S+ Q+ + + +V +
Sbjct: 250 PVQGGIFALSWLDSQKFATVGADATIRVWDVTT-SKCVQKWTLDKQQLGNQQVGVVATGN 308
Query: 111 NWLISGSQDGTMRLFDI 127
+IS S DGT+ +++
Sbjct: 309 GRIISLSLDGTLNFYEL 325
Score = 43.0 bits (99), Expect = 2e-05
Identities = 22/209 (10%), Positives = 53/209 (25%), Gaps = 7/209 (3%)
Query: 55 NDVAWSCIEENHIATGATNGAVVVW---NLGQISRSKQERVFNDHKRTVNKVSFHYVESN 111
+D++W G V+ + G + + + +
Sbjct: 119 SDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTV 178
Query: 112 WLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR 171
F + T + + + +
Sbjct: 179 GDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG 238
Query: 172 RPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL-SIKPSLEYSINT-IASV 229
K + AT D TI+VWD+ + K +++++
Sbjct: 239 EFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGN 298
Query: 230 SRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
++ + S SL D ++N +++
Sbjct: 299 QQVGVVATGNGRIISLSL--DGTLNFYEL 325
Score = 38.7 bits (88), Expect = 6e-04
Identities = 17/160 (10%), Positives = 34/160 (21%), Gaps = 11/160 (6%)
Query: 65 NHIATGATNGAVV-VWNLGQISRSKQERVFNDHKRTVNKVSFHYVES-NWLISGSQDGTM 122
N IA A V + G + V V F ++ +L SG + G +
Sbjct: 30 NAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKV 89
Query: 123 RLFDIR--------CQESTKIFHSNTESVRDVEFNPHSP-YAFASVSENGTIQQWDVRRP 173
++ F + D+ ++ +
Sbjct: 90 IVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSG 149
Query: 174 EKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
T D ++ +
Sbjct: 150 NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQG 189
Score = 34.9 bits (78), Expect = 0.012
Identities = 29/254 (11%), Positives = 71/254 (27%), Gaps = 19/254 (7%)
Query: 54 CNDVAWSCIEE-NHIATGATNGAVVVWNLG-----QISRSKQERVFNDHKRTVNKVSFHY 107
V +S I+ ++ +G +G V+VW + F ++ +S+ +
Sbjct: 66 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDF 125
Query: 108 VESNWLISGSQ-DGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQ 166
+ G D S +++ + P +V ++G++
Sbjct: 126 EGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVV 185
Query: 167 QWDVRRPEKCFYQFT--AHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSIN 224
+ + T + ++ P+ I
Sbjct: 186 FYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIE 245
Query: 225 TIASVSRIKWRPQRKF---HLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVS----G 277
+ A+ D+++ VWD+ + +T K + G
Sbjct: 246 DDQEPVQGGIFALSWLDSQKFATVGA--DATIRVWDVTTSK-CVQKWTLDKQQLGNQQVG 302
Query: 278 LAWRGDPQLFIASS 291
+ G+ ++ S
Sbjct: 303 VVATGNGRIISLSL 316
Score = 31.0 bits (68), Expect = 0.18
Identities = 13/116 (11%), Positives = 36/116 (31%), Gaps = 10/116 (8%)
Query: 183 HSGPIFACDWHPEHAWLATASRDKTI----KVWDLSIKPSLEYSINTIASVSRIKWRPQR 238
+ P +A D + P ++++ + + V+ +K+ P +
Sbjct: 16 QRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIK 75
Query: 239 K-FHLASCS-----LVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFI 288
+L S +V + + + F +S ++W + +
Sbjct: 76 GSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLC 131
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 43.7 bits (101), Expect = 2e-05
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 8/86 (9%)
Query: 176 CFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLS---IKPSLEYSINTIASVSRI 232
+ AHSG +F W P+ +A+AS DKTIK+W+++ ++ ++ I
Sbjct: 230 DSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGI 289
Query: 233 KWRPQRKFHLASCSLVVDSSVNVWDI 258
W Q L S S + +N +
Sbjct: 290 IWTKQ---ALVSISA--NGFINFVNP 310
Score = 43.4 bits (100), Expect = 2e-05
Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 4/60 (6%)
Query: 156 FASVSENGTIQQWDVR--RPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
AS S + TI+ W+V + EK T W + L + S + I +
Sbjct: 253 IASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA--LVSISANGFINFVNP 310
Score = 41.0 bits (94), Expect = 1e-04
Identities = 7/50 (14%), Positives = 15/50 (30%), Gaps = 1/50 (2%)
Query: 162 NGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVW 211
++ V +T HS P + A+ +++W
Sbjct: 37 GTSVYTVPVGSL-TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIW 85
Score = 40.7 bits (93), Expect = 2e-04
Identities = 12/64 (18%), Positives = 24/64 (37%)
Query: 106 HYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTI 165
+ + S S D T++++++ + K T + A S+S NG I
Sbjct: 246 WSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFI 305
Query: 166 QQWD 169
+
Sbjct: 306 NFVN 309
Score = 38.7 bits (88), Expect = 6e-04
Identities = 11/77 (14%), Positives = 27/77 (35%), Gaps = 3/77 (3%)
Query: 51 NFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVES 110
+ + IA+ + + + +WN ++ K E+ R ++
Sbjct: 237 HSGSVFGLTWSPDGTKIASASADKTIKIWN---VATLKVEKTIPVGTRIEDQQLGIIWTK 293
Query: 111 NWLISGSQDGTMRLFDI 127
L+S S +G + +
Sbjct: 294 QALVSISANGFINFVNP 310
Score = 38.0 bits (86), Expect = 0.001
Identities = 12/134 (8%), Positives = 29/134 (21%), Gaps = 5/134 (3%)
Query: 65 NHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRL 124
+ I +V + ++ +H + SG G +R+
Sbjct: 30 DKIQY-CNGTSVYTVP---VGSLTDTEIYTEHSHQTTVAKTSP-SGYYCASGDVHGNVRI 84
Query: 125 FDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHS 184
+D S + + S + G + V +
Sbjct: 85 WDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTG 144
Query: 185 GPIFACDWHPEHAW 198
+ +
Sbjct: 145 QARAMNSVDFKPSR 158
Score = 30.3 bits (66), Expect = 0.34
Identities = 6/52 (11%), Positives = 13/52 (25%), Gaps = 4/52 (7%)
Query: 241 HLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSR 292
+ C+ +SV + +TEH + +
Sbjct: 31 KIQYCN---GTSVYTVPVGSL-TDTEIYTEHSHQTTVAKTSPSGYYCASGDV 78
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 42.5 bits (98), Expect = 3e-05
Identities = 15/142 (10%), Positives = 49/142 (34%), Gaps = 6/142 (4%)
Query: 111 NWLISGSQDGTMRLFDIRCQESTKIF--HSNTESVRDVEFNPHSPYAFASVSENGTIQQW 168
+++++ ++ + + D K+ + P A+A+V+++ ++ +
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 169 DVRRPE----KCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSIN 224
D+ E +F P+ LA +++ ++P+ +
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121
Query: 225 TIASVSRIKWRPQRKFHLASCS 246
R + R+ + + +
Sbjct: 122 AETLSRRKAFEAPRQITMLAWA 143
Score = 38.6 bits (88), Expect = 7e-04
Identities = 17/194 (8%), Positives = 46/194 (23%), Gaps = 6/194 (3%)
Query: 64 ENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMR 123
++I A +VV + +++ K + D T + ++ ++
Sbjct: 1 RDYILAPARPDKLVVIDTEKMAVDKVITI-ADAGPTPMVPMVAPGGRIAYATVNKSESLV 59
Query: 124 LFDIR-----CQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFY 178
D+ + +S+ +P S +P +
Sbjct: 60 KIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVAL 119
Query: 179 QFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINTIASVSRIKWRPQR 238
A + + LA A + + + + W +
Sbjct: 120 YDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAET 179
Query: 239 KFHLASCSLVVDSS 252
++
Sbjct: 180 YAQPDVLAVWNQHE 193
Score = 38.2 bits (87), Expect = 9e-04
Identities = 10/178 (5%), Positives = 38/178 (21%), Gaps = 7/178 (3%)
Query: 38 ETHNLRVGKNINLNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHK 97
+ L ++ + + E ++
Sbjct: 136 QITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESS 195
Query: 98 RTVNKVSF-HYVESNWLISGSQDGTMRLFDIRCQESTKI-FHSNTESVRDVEFNPHSPYA 155
+ + + + + + D+ E NP A
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA 255
Query: 156 FASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
F ++ +D+ + + ++ + + + + + +D
Sbjct: 256 F---GAYNVLESFDLEKNASI--KRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDA 308
Score = 31.7 bits (70), Expect = 0.10
Identities = 9/65 (13%), Positives = 23/65 (35%), Gaps = 6/65 (9%)
Query: 198 WLATASRDKTIKVWDLSIKPSLEYSI---NTIASVSRIKWRPQRKFHLASCSLVVDSSVN 254
++ +R + V D K +++ I + + P + A+ + S+
Sbjct: 3 YILAPARPDKLVVIDTE-KMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK--SESLV 59
Query: 255 VWDIR 259
D+
Sbjct: 60 KIDLV 64
Score = 30.5 bits (67), Expect = 0.28
Identities = 13/125 (10%), Positives = 29/125 (23%), Gaps = 7/125 (5%)
Query: 51 NFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVES 110
+ + + A ++ +L + R + +
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLE--TGEMAMREVRIMDVFYFSTAVNP--- 250
Query: 111 NWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDV 170
+ + FD+ S K S V + + G + +D
Sbjct: 251 AKTRAFGAYNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLG-GALGDLAAYDA 308
Query: 171 RRPEK 175
EK
Sbjct: 309 ETLEK 313
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 39.5 bits (90), Expect = 3e-04
Identities = 8/85 (9%), Positives = 23/85 (27%), Gaps = 1/85 (1%)
Query: 114 ISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVRRP 173
I+ S+ + + D+ + T + +P + + + + + D
Sbjct: 6 IANSESDNISVIDVTSNKVTATI-PVGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN 64
Query: 174 EKCFYQFTAHSGPIFACDWHPEHAW 198
S A + +
Sbjct: 65 NVIATVPAGSSPQGVAVSPDGKQVY 89
Score = 34.8 bits (78), Expect = 0.012
Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 1/63 (1%)
Query: 152 SPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVW 211
S +A+ + SE+ I DV K S P+ A + + +
Sbjct: 1 STFAYIANSESDNISVIDVTSN-KVTATIPVGSNPMGAVISPDGTKVYVANAHSNDVSII 59
Query: 212 DLS 214
D +
Sbjct: 60 DTA 62
Score = 29.5 bits (64), Expect = 0.55
Identities = 4/31 (12%), Positives = 9/31 (29%)
Query: 141 ESVRDVEFNPHSPYAFASVSENGTIQQWDVR 171
+ P + ++S T+ D
Sbjct: 244 PDPAGIAVTPDGKKVYVALSFCNTVSVIDTA 274
Score = 28.3 bits (61), Expect = 1.4
Identities = 10/121 (8%), Positives = 27/121 (22%), Gaps = 2/121 (1%)
Query: 95 DHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPY 154
R+ ++ + ++ ++ + D +
Sbjct: 155 SVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKA 214
Query: 155 AFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWL-ATASRDKTIKVWDL 213
+V + K + P P+ + S T+ V D
Sbjct: 215 YVTNVDKYFNTVSMIDTGTNKITARIPVGPDP-AGIAVTPDGKKVYVALSFCNTVSVIDT 273
Query: 214 S 214
+
Sbjct: 274 A 274
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 39.0 bits (89), Expect = 5e-04
Identities = 9/109 (8%), Positives = 26/109 (23%), Gaps = 6/109 (5%)
Query: 110 SNWLISGSQDGTMRLFDIRCQESTK-IFHSNTESVRDVEFNPHSPYAFASVSENGTIQQW 168
++I + + + D+ K + P + A+ + G I
Sbjct: 8 HEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGI 67
Query: 169 DVRRPE-----KCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWD 212
D+ + +++ P+ +
Sbjct: 68 DLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDH 116
Score = 39.0 bits (89), Expect = 6e-04
Identities = 4/103 (3%), Positives = 25/103 (24%), Gaps = 3/103 (2%)
Query: 112 WLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR 171
+ D++ ++ ++ + ++D++
Sbjct: 222 DPATADLLYGYLSVDLKTGKTHTQEFADLTE-LYFTGLRSPKDPNQIYGVLNRLAKYDLK 280
Query: 172 RPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLS 214
+ + + + + + L + V++
Sbjct: 281 QRKLI--KAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPD 321
Score = 36.3 bits (82), Expect = 0.004
Identities = 8/112 (7%), Positives = 25/112 (22%), Gaps = 9/112 (8%)
Query: 192 WHPEHAWLATASRDKTIKVWDL-SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVD 250
H ++ + + V D+ S + P + +
Sbjct: 4 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH--Y 61
Query: 251 SSVNVWDI-----RRPYIPLASFTEHKDVVSGLAW-RGDPQLFIASSRVSII 296
+ D+ + E + A +++ + +
Sbjct: 62 GDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRL 113
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 37.3 bits (85), Expect = 0.002
Identities = 15/191 (7%), Positives = 38/191 (19%), Gaps = 15/191 (7%)
Query: 113 LISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSP-----YAFASVSENGTIQQ 167
G++ + + D + + + V ++ +
Sbjct: 41 GSHGTRTDVVEIIDNTTLDHAGEIVIPAKHAQHVPSPYNTAFSADGKRLYVANITPAASV 100
Query: 168 WDVR-RPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLS---IKPSLEYSI 223
+ +K + + + + + A K + V +
Sbjct: 101 TVIDAVSKKMLSEIDTAACVLAYPA--GDDRFTALCESGKALTVTLDANGKEAKRTMSDA 158
Query: 224 NTIASVSRIKWRPQR-KFHLASCSLVVDSSVNVWDIRRPYI-PLASFTEHKDVVSGLAWR 281
R K + +V D ++ D WR
Sbjct: 159 FIDVDKDPAFVNASRYKGDYLFTTY--GGNVRSADFSGDKPAFGKPWSLLTDAERAEGWR 216
Query: 282 GDPQLFIASSR 292
A
Sbjct: 217 PGGMQQTAVQA 227
Score = 31.9 bits (71), Expect = 0.10
Identities = 17/127 (13%), Positives = 29/127 (22%), Gaps = 17/127 (13%)
Query: 179 QFTAHSGPIFACDWHPEHAWLATA----------SRDKTIKVWDLS---IKPSLEYSINT 225
Q GP FA P+ A +R +++ D + +
Sbjct: 13 QIDGGFGPGFA--IAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHAGEIVIPAKH 70
Query: 226 IASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQ 285
V + + +V I +E LA+
Sbjct: 71 AQHVPSPYNTAFSADGKRLYVANITPAASVTVIDAV--SKKMLSEIDTAACVLAYPAGDD 128
Query: 286 LFIASSR 292
F A
Sbjct: 129 RFTALCE 135
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 33.0 bits (74), Expect = 0.042
Identities = 17/141 (12%), Positives = 33/141 (23%), Gaps = 5/141 (3%)
Query: 154 YAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDL 213
++ + G I D +K +L RD I + DL
Sbjct: 33 LFSVTLRDAGQIALVDGDS-KKIVKVIDTGYAV-HISRMSASGRYLLVIGRDARIDMIDL 90
Query: 214 -SIKPSLEYSINTIASVSRIKWRPQRKF--HLASCSLVVDSSVNVWDIRRPYIPLASFTE 270
+ +P+ I ++ + + + D T
Sbjct: 91 WAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTR 150
Query: 271 HKDVVSGLAWRGDPQLFIASS 291
V + I +S
Sbjct: 151 GMTVDTQTYHPEPRVAAIIAS 171
Score = 29.9 bits (66), Expect = 0.44
Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 8/94 (8%)
Query: 157 ASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLA-------TASRDKTIK 209
S+S GT + + K + G HP+ + L A +++
Sbjct: 276 GSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVA 335
Query: 210 VWDLSIKPSLEYSINTIASVSRIKWRPQRKFHLA 243
V+DL +Y + IA + + +R
Sbjct: 336 VFDLK-NLDAKYQVLPIAEWADLGEGAKRVVQPE 368
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 32.1 bits (71), Expect = 0.091
Identities = 8/66 (12%), Positives = 21/66 (31%), Gaps = 4/66 (6%)
Query: 151 HSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSGPIFACDWHP--EHAWLATASRDKTI 208
+ + + + D + E+ I + + + A ++ DKT+
Sbjct: 268 DQRDEWRHKTASRFVVVLDAKTGER--LAKFEMGHEIDSINVSQDEKPLLYALSTGDKTL 325
Query: 209 KVWDLS 214
+ D
Sbjct: 326 YIHDAE 331
Score = 28.2 bits (61), Expect = 1.6
Identities = 18/190 (9%), Positives = 42/190 (22%), Gaps = 8/190 (4%)
Query: 110 SNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPH----SPYAFASVSENGTI 165
+ + G + + +FD T V P +P + +
Sbjct: 68 FSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSP 127
Query: 166 QQWDVRRPEKCFYQFTAHSGPIFACDWHPEHAWLATASRDKTIKVWDLSIKPSLEYSINT 225
+ P + RD ++ + + E +
Sbjct: 128 APAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTE 187
Query: 226 IASVSRIKWRPQRKFHLASCSLVV---DSSVNVWDIRRPYI-PLASFTEHKDVVSGLAWR 281
+ + + LV ++ D+ L + + WR
Sbjct: 188 VFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWR 247
Query: 282 GDPQLFIASS 291
+A
Sbjct: 248 PGGWQQVAYH 257
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 31.7 bits (70), Expect = 0.11
Identities = 6/79 (7%), Positives = 25/79 (31%), Gaps = 2/79 (2%)
Query: 114 ISGSQDGTMRLFDIRCQESTKI--FHSNTESVRDVEFNPHSPYAFASVSENGTIQQWDVR 171
I+ + + ++++ + + + V+ + +P Y + V + + +
Sbjct: 8 IASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIA 67
Query: 172 RPEKCFYQFTAHSGPIFAC 190
+ + P
Sbjct: 68 PDDGALTFAAESALPGSLT 86
Score = 31.0 bits (68), Expect = 0.21
Identities = 8/63 (12%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Query: 154 YAFASVSENGTIQQWDVRRPEK-CFYQFTAHSGPIFACDWHPEHAWLATASR-DKTIKVW 211
+ + E+ I W++ Q G + P+ +L R + + +
Sbjct: 5 TVYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAY 64
Query: 212 DLS 214
++
Sbjct: 65 RIA 67
Score = 28.6 bits (62), Expect = 1.1
Identities = 9/60 (15%), Positives = 23/60 (38%), Gaps = 4/60 (6%)
Query: 201 TASRDKTIKVWDLSIKPSLEY--SINTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDI 258
+ + I VW+L+ + +L ++ V + P +++ + V + I
Sbjct: 9 ASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVR--PEFRVLAYRI 66
Score = 27.5 bits (59), Expect = 2.7
Identities = 13/124 (10%), Positives = 31/124 (25%), Gaps = 3/124 (2%)
Query: 50 LNFSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVE 109
+ F N+ C+ E + + N+ + R +
Sbjct: 182 MVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDG 241
Query: 110 SNWLISGSQDGT--MRLFDIRCQESTKIFHSNTE-SVRDVEFNPHSPYAFASVSENGTIQ 166
+ + +K TE R + Y A+ ++ I
Sbjct: 242 RHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHIS 301
Query: 167 QWDV 170
+++
Sbjct: 302 VYEI 305
Score = 27.5 bits (59), Expect = 2.7
Identities = 12/133 (9%), Positives = 30/133 (22%), Gaps = 4/133 (3%)
Query: 69 TGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVSFHYVESNWLISGSQDGTMRLFDIR 128
+ + VWNL +V D V + + + + + + I
Sbjct: 9 ASPESQQIHVWNLNHEGALTLTQVV-DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIA 67
Query: 129 CQESTKIFHSNTE---SVRDVEFNPHSPYAFASVSENGTIQQWDVRRPEKCFYQFTAHSG 185
+ F + + S+ + + + F G + +
Sbjct: 68 PDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL 127
Query: 186 PIFACDWHPEHAW 198
Sbjct: 128 DGCHSANISPDNR 140
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 29.9 bits (66), Expect = 0.35
Identities = 13/165 (7%), Positives = 26/165 (15%), Gaps = 33/165 (20%)
Query: 149 NPHSPYAFASVSENGTIQQWDVRRPEKCFYQ-FTAHSGPIFACDWHPEHAWLATA----- 202
+ GT + W + + A A
Sbjct: 30 ISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSLAV--AGHSGSDFALASTSFA 87
Query: 203 -----SRDKTIKVWDL-------SIKPSLEYSINTIASVSRIKWRPQRKFHLASCSLVVD 250
R ++V+D I+ + V I L
Sbjct: 88 RSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFG--S 145
Query: 251 SSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGDPQLFIASSRVSI 295
S+ + ++
Sbjct: 146 SAAAGLS-----------VPGASDDQLTKSASCFHIHPGAAATHY 179
Score = 27.6 bits (60), Expect = 2.2
Identities = 8/122 (6%), Positives = 27/122 (22%), Gaps = 8/122 (6%)
Query: 57 VAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTVNKVS------FHYVES 110
+ W+ GA + + ++ F +
Sbjct: 225 LVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVE 284
Query: 111 NWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPH-SPYAFASVSENGTIQQWD 169
+ + +++ SN + + +A+ + + +D
Sbjct: 285 HSRSCLAAAENTSSVTASVGQTSGPI-SNGHDSDAIIAAQDGASDNYANSAGTEVLDIYD 343
Query: 170 VR 171
Sbjct: 344 AA 345
>d1kqfb1 d.58.1.5 (B:2-245) Formate dehydrogenase N, iron-sulfur
(beta) subunit {Escherichia coli [TaxId: 562]}
Length = 244
Score = 28.3 bits (62), Expect = 1.1
Identities = 12/68 (17%), Positives = 21/68 (30%), Gaps = 2/68 (2%)
Query: 43 RVGKNINLN--FSCNDVAWSCIEENHIATGATNGAVVVWNLGQISRSKQERVFNDHKRTV 100
V K I+++ C +C E N I + V N +S +
Sbjct: 28 EVAKLIDVSTCIGCKACQVACSEWNDIRDEVGHCVGVYDNPADLSAKSWTVMRFSETEQN 87
Query: 101 NKVSFHYV 108
K+ +
Sbjct: 88 GKLEWLIR 95
>d1k9vf_ c.23.16.1 (F:) GAT subunit, HisH, (or domain) of
imidazoleglycerolphosphate synthase HisF {Thermotoga
maritima [TaxId: 2336]}
Length = 200
Score = 28.0 bits (61), Expect = 1.4
Identities = 15/93 (16%), Positives = 30/93 (32%), Gaps = 2/93 (2%)
Query: 105 FHYVESNWLISGSQDGTMRLFDIRCQESTKIFHSNTESVRDVEFNPHSPYAFASVSENGT 164
E + G + ++ ++ S ++ H V + P+ Y F
Sbjct: 88 QLLFEESEEAPGVKGLSLIEGNVVKLRSRRLPHMGWNEVIFKDTFPNGYYYFVHTYRAVC 147
Query: 165 IQQWDVRRPEKCFYQFTA--HSGPIFACDWHPE 195
++ + E F + G I +HPE
Sbjct: 148 EEEHVLGTTEYDGEIFPSAVRKGRILGFQFHPE 180
>d2fkba1 d.113.1.2 (A:8-168) Hypothetical protein YfcD {Escherichia
coli [TaxId: 562]}
Length = 161
Score = 25.9 bits (56), Expect = 4.5
Identities = 15/70 (21%), Positives = 21/70 (30%)
Query: 224 NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRGD 283
IA SR + R Q H A+ +V D + RR G+ +
Sbjct: 13 EVIAQASREQMRAQCLRHRATYIVVHDGMGKILVQRRTETKDFLPGMLDATAGGVVQADE 72
Query: 284 PQLFIASSRV 293
L A
Sbjct: 73 QLLESARREA 82
>d2o5fa1 d.113.1.2 (A:7-168) Hypothetical protein DR0079
{Deinococcus radiodurans str. R1 (Deinococcus
radiodurans R1) [TaxId: 243230]}
Length = 162
Score = 25.6 bits (55), Expect = 6.2
Identities = 8/59 (13%), Positives = 16/59 (27%)
Query: 224 NTIASVSRIKWRPQRKFHLASCSLVVDSSVNVWDIRRPYIPLASFTEHKDVVSGLAWRG 282
+ + R + + + + +S +W RR V G G
Sbjct: 11 EVVGQILRTDPALRWERVRVVNAFLRNSQGQLWIPRRSPSKSLFPNALDVSVGGAVQSG 69
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.133 0.414
Gapped
Lambda K H
0.267 0.0373 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,226,688
Number of extensions: 54320
Number of successful extensions: 410
Number of sequences better than 10.0: 1
Number of HSP's gapped: 274
Number of HSP's successfully gapped: 136
Length of query: 330
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 244
Effective length of database: 1,226,816
Effective search space: 299343104
Effective search space used: 299343104
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.2 bits)