Query psy6218
Match_columns 533
No_of_seqs 260 out of 1284
Neff 5.4
Searched_HMMs 29240
Date Fri Aug 16 20:43:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6218.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6218hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j0a_A Beta-1,3-N-acetylglucos 100.0 7.1E-30 2.4E-34 257.9 14.4 188 331-527 10-214 (280)
2 2j0a_A Beta-1,3-N-acetylglucos 98.8 1.2E-09 4.1E-14 110.1 2.9 82 7-90 121-213 (280)
3 1qg8_A Protein (spore coat pol 54.4 29 0.00099 32.0 7.3 106 405-513 80-199 (255)
4 4fix_A UDP-galactofuranosyl tr 45.8 25 0.00085 39.0 6.1 108 403-519 258-406 (657)
5 4hg6_A Cellulose synthase subu 37.7 56 0.0019 36.8 7.5 111 404-524 229-362 (802)
6 2d7i_A Polypeptide N-acetylgal 31.6 1.3E+02 0.0045 32.2 8.9 100 415-519 196-327 (570)
7 2z86_A Chondroitin synthase; G 24.3 70 0.0024 34.2 5.1 34 406-441 167-200 (625)
8 2ffu_A Ppgalnact-2, polypeptid 17.2 85 0.0029 32.7 3.8 26 415-440 146-171 (501)
9 1xhb_A Polypeptide N-acetylgal 15.9 40 0.0014 34.8 0.8 26 415-440 114-139 (472)
10 3bcv_A Putative glycosyltransf 14.3 91 0.0031 28.2 2.7 27 415-441 84-110 (240)
No 1
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=99.96 E-value=7.1e-30 Score=257.90 Aligned_cols=188 Identities=19% Similarity=0.242 Sum_probs=136.8
Q ss_pred CCCceEEEEEEcCCCChHHHHHHHHHhhhccCCCcEEEEecCCCCCCCCCCCCC-----cEEecCCCCC--C-CchHHHH
Q psy6218 331 SESGLLFVGVMTANSYLNTRATSVYDTWARDIPGRVAFFTSESSTLPAARPDLP-----LVKLRGVDDS--Y-PPQKKSF 402 (533)
Q Consensus 331 ~~~~~LlI~V~Tsp~~~~tRr~AIR~TWgr~~~~rvvFfsg~~~~i~~~d~~lp-----vV~L~~~dD~--Y-nlt~Kt~ 402 (533)
....+|+|+|+|+++++.+|+++|++||+++++..+.||++..+ +.++ .+...++.+. + +++.|+.
T Consensus 10 ~~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~~~fifsd~~d------~~l~~~~~~~~~~~~~~~~~~~~~l~~K~~ 83 (280)
T 2j0a_A 10 LQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQQTFIFTDSPD------ERLQERLGPHLVVTQCSAEHSHPALSCKMA 83 (280)
T ss_dssp CCGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGGGEEEEESSCC------HHHHHHHGGGEEECCC-------CCCHHHH
T ss_pred CCcccEEEEEECcHHHHHHHHHHHHHHHhccCCCceEEEcCCCc------ccccccccccceeccccccccccchHHHHH
Confidence 35679999999999999999999999999999645555776553 2222 1222233222 2 4688988
Q ss_pred HHHHHHHHHhCCCCceEEEEcCCccccHHHHHHHHhcCCCCCCeEEEeecCCCcc---cccc--ccCCCCCCCccCCCce
Q psy6218 403 LMLQYMWERYGDKYEWFMRADDDLYVRGERLARMLRSVDSSKPQFIGQAGRGNQE---EFGL--LSLEYDENFCMGGPGV 477 (533)
Q Consensus 403 ~~L~~l~e~~~~~~dWFlKvDDDTYVnvdNL~~~L~~~dpseplYiG~~~~~~~~---ey~~--~~~~~~~~Y~sGGAGY 477 (533)
..+++.++ +++|||+|+||||||+++||+++|+.+||++++|+|++....+. ++.. .......+||+||+||
T Consensus 84 ~~~~~~l~---~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~~~~~~~~~~~~~~~~~y~~GGaG~ 160 (280)
T 2j0a_A 84 AEFDAFLV---SGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIHASELQSKQRTKLVRFWFATGGAGF 160 (280)
T ss_dssp HHHHHHHH---HTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-------------------CCEECGGGCE
T ss_pred HHHHHHhC---CCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCccccccccCccccccccccCcccCCCEE
Confidence 77776542 48999999999999999999999999999999999998754321 1100 0011246899999999
Q ss_pred eeCHHHHHHHHHhHHHhhc----cCCCCchhHHHHHHHHhccCCceeecCCCcc
Q psy6218 478 IMSRATLALVAPHIKYCLK----NLYTTHEDVELGRCVQKFAGIPCTWSYEVSI 527 (533)
Q Consensus 478 VLSr~aLrkL~~~~~~C~~----~~~~~~EDV~LG~CL~~~lGV~~t~s~e~~~ 527 (533)
|||++++++|++....|.- ......||++||+|+++.+||+++++..+++
T Consensus 161 vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~ 214 (280)
T 2j0a_A 161 CINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHS 214 (280)
T ss_dssp EEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCC
T ss_pred EECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccC
Confidence 9999999999987655521 1234579999999999338999999988775
No 2
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=98.81 E-value=1.2e-09 Score=110.08 Aligned_cols=82 Identities=13% Similarity=0.092 Sum_probs=57.5
Q ss_pred ccceeeccCCCCCcchhcc-c----CCccCCCcccCCCceeeeHHHHHHhcccHHHHHhhccCC------CCccccchhh
Q psy6218 7 RDKSFYTHGGRGNQEEFGL-L----SLEYDENFCMGGPGVIMSRATLALVAPHIKYCLKNLYTT------HEDVELGRCV 75 (533)
Q Consensus 7 ~~~~~~g~~~~g~~~~~~~-~----~~~~~~~yC~~g~G~~~Sr~~l~~~~p~l~~C~~~~~s~------~~D~~lGRCi 75 (533)
++++|||....++|.+... + .......||+||+|++|||+++++|.++.+.| +.++. .+|++||+|+
T Consensus 121 ~~~~YiG~~~~~~~~~~~~~~~~~~~~~~~~~y~~GGaG~vlSr~~l~~l~~~~~~~--~~~~~~~~~~~~dD~~lG~Cl 198 (280)
T 2j0a_A 121 DRDVYVGKPSLNRPIHASELQSKQRTKLVRFWFATGGAGFCINRQLALKMVPWASGS--HFVDTSALIRLPDDCTVGYII 198 (280)
T ss_dssp TSCCEEECEEC-------------------CCEECGGGCEEEEHHHHHHHHHHHTTC--TTSCCTTTTTSCHHHHHHHHH
T ss_pred CCCEEEEEeccCccccccccCccccccccccCcccCCCEEEECHHHHHHHHHhhccc--ccccccccCCCCccHHHHHHH
Confidence 4699999976655432100 0 01124579999999999999999999998888 33333 3599999999
Q ss_pred hhhcCCccccccccc
Q psy6218 76 QKFAGIPFLSSRNRR 90 (533)
Q Consensus 76 ~~~~~~~C~~~~~~~ 90 (533)
.+.+||.|+.+..|.
T Consensus 199 ~~~lGV~~~~~~~Fh 213 (280)
T 2j0a_A 199 ECKLGGRLQPSPLFH 213 (280)
T ss_dssp HHTTCCCEEECTTCC
T ss_pred HhcCCCCceeccccc
Confidence 999999999994443
No 3
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=54.36 E-value=29 Score=31.99 Aligned_cols=106 Identities=16% Similarity=0.097 Sum_probs=60.6
Q ss_pred HHHHHHHhCCCCceEEEEcCCccccHHHHHHHHhcCC--CCCCeEEEeecC----CCcccccc-ccC-----CCCCCCcc
Q psy6218 405 LQYMWERYGDKYEWFMRADDDLYVRGERLARMLRSVD--SSKPQFIGQAGR----GNQEEFGL-LSL-----EYDENFCM 472 (533)
Q Consensus 405 L~~l~e~~~~~~dWFlKvDDDTYVnvdNL~~~L~~~d--pseplYiG~~~~----~~~~ey~~-~~~-----~~~~~Y~s 472 (533)
+....+.. +.+|++..|+|.++..+.|..+++.++ |.-.+..|.... ........ ..+ .....+.
T Consensus 80 ~N~gi~~a--~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 156 (255)
T 1qg8_A 80 INQAIEMA--EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETVRPAAQVTWNAPCAI- 156 (255)
T ss_dssp HHHHHHHC--CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEEECCCSCBSCCTTTS-
T ss_pred HHHHHHHc--CCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhccCchHHHHHhhcCCC-
Confidence 44444543 689999999999998888877776553 444555554321 11000000 000 0112333
Q ss_pred CCCceeeCHHHHHHHHHhHHHhh--ccCCCCchhHHHHHHHHh
Q psy6218 473 GGPGVIMSRATLALVAPHIKYCL--KNLYTTHEDVELGRCVQK 513 (533)
Q Consensus 473 GGAGYVLSr~aLrkL~~~~~~C~--~~~~~~~EDV~LG~CL~~ 513 (533)
.|++.++.+++++++-..+.... ...+...||..+..-+..
T Consensus 157 ~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~ 199 (255)
T 1qg8_A 157 DHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNH 199 (255)
T ss_dssp CGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTT
T ss_pred ccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHH
Confidence 45889999999999863220000 011246799988877765
No 4
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=45.80 E-value=25 Score=38.99 Aligned_cols=108 Identities=17% Similarity=0.239 Sum_probs=64.3
Q ss_pred HHHHHHHHHhCCCCceEEEEcCCccccHHHHHHHHhcCCC-CCCeEEE-eecCCCcc-------------c---------
Q psy6218 403 LMLQYMWERYGDKYEWFMRADDDLYVRGERLARMLRSVDS-SKPQFIG-QAGRGNQE-------------E--------- 458 (533)
Q Consensus 403 ~~L~~l~e~~~~~~dWFlKvDDDTYVnvdNL~~~L~~~dp-seplYiG-~~~~~~~~-------------e--------- 458 (533)
.+++++.... +++|+++.|||+.+..+-|..+++.++. .+...+| ........ .
T Consensus 258 ~Gl~~A~g~~--~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 335 (657)
T 4fix_A 258 RVMYEALKNT--DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHA 335 (657)
T ss_dssp HHHHHHHHHC--CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTC
T ss_pred HHHHHHHhcC--CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccccccc
Confidence 3566665432 6899999999999998888888775432 2233444 22110000 0
Q ss_pred -----ccc--c----------cCCCCCCCccCCCceeeCHHHHHHHHHhHHHhhccCCCCchhHHHHHHHHhccCCce
Q psy6218 459 -----FGL--L----------SLEYDENFCMGGPGVIMSRATLALVAPHIKYCLKNLYTTHEDVELGRCVQKFAGIPC 519 (533)
Q Consensus 459 -----y~~--~----------~~~~~~~Y~sGGAGYVLSr~aLrkL~~~~~~C~~~~~~~~EDV~LG~CL~~~lGV~~ 519 (533)
+.. + .......|+ +|++.++.+++++++--- . ..+...||+.++.=+.+ .|...
T Consensus 336 ~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~-~g~~~lirr~v~~~vGgf-d----~~F~~~ED~Dl~lR~~~-~G~ki 406 (657)
T 4fix_A 336 EYDHDFAEYPLNDNNSRSKLLHRRIDVDYN-GWWTCMIPRQVAEELGQP-L----PLFIKWDDADYGLRAAE-HGYPT 406 (657)
T ss_dssp CSCEETTTSCSSCSSHHHHGGGBCCCCSBC-CTTEEEEEHHHHHHHCSC-C----SCSSSSHHHHHHHHHHH-TTCCE
T ss_pred cccccccccccccccccccccccceecccc-chhHhHhhHHHHHHhCCC-h----hHhccCcHHHHHHHHHH-cCCeE
Confidence 000 0 000122344 569999999999987521 1 12456699999887776 57654
No 5
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=37.72 E-value=56 Score=36.85 Aligned_cols=111 Identities=19% Similarity=0.112 Sum_probs=67.6
Q ss_pred HHHHHHHHhCCCCceEEEEcCCccccHHHHHHHHhcC--CCCCCeEEEeecCCCcc--------------cccccc----
Q psy6218 404 MLQYMWERYGDKYEWFMRADDDLYVRGERLARMLRSV--DSSKPQFIGQAGRGNQE--------------EFGLLS---- 463 (533)
Q Consensus 404 ~L~~l~e~~~~~~dWFlKvDDDTYVnvdNL~~~L~~~--dpseplYiG~~~~~~~~--------------ey~~~~---- 463 (533)
.+....+.. +.+|++..|+|+.+..+.|.++++.+ +|+-.+..|.......+ ++...+
T Consensus 229 alN~gl~~a--~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (802)
T 4hg6_A 229 NMSAALERL--KGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIH 306 (802)
T ss_dssp HHHHHHHHC--CCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHH
T ss_pred HHHHHHHhc--CCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHH
Confidence 355555554 68999999999999999888888866 45444444433211110 000000
Q ss_pred ---CCCCCCCccCCCceeeCHHHHHHHHHhHHHhhccCCCCchhHHHHHHHHhccCCceeecCC
Q psy6218 464 ---LEYDENFCMGGPGVIMSRATLALVAPHIKYCLKNLYTTHEDVELGRCVQKFAGIPCTWSYE 524 (533)
Q Consensus 464 ---~~~~~~Y~sGGAGYVLSr~aLrkL~~~~~~C~~~~~~~~EDV~LG~CL~~~lGV~~t~s~e 524 (533)
......++. |++.++.+++++++--. . .....||..++.-+.+ .|.......+
T Consensus 307 ~~~~~~~~~~~~-G~~~~~Rr~al~~vGgf-~-----~~~~~ED~~l~~rl~~-~G~ri~~~~~ 362 (802)
T 4hg6_A 307 RGLDRWGGAFFC-GSAAVLRRRALDEAGGF-A-----GETITEDAETALEIHS-RGWKSLYIDR 362 (802)
T ss_dssp HHHHHTTCCCCC-SSSEEEEHHHHHHHTTC-C-----CSSSSHHHHHHHHHHT-TTCCEEECCC
T ss_pred hhHhhcCCceec-ccchhhhHHHHHHcCCc-C-----CCCcchHHHHHHHHHH-cCCeEEEecC
Confidence 001123443 58899999999987421 1 1134699999988887 6766544443
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=31.62 E-value=1.3e+02 Score=32.18 Aligned_cols=100 Identities=10% Similarity=-0.022 Sum_probs=54.6
Q ss_pred CCceEEEEcCCccccHHHHHHHHhcCCCCCCeEEEeecC---C------------Ccccc------cccc--C-------
Q psy6218 415 KYEWFMRADDDLYVRGERLARMLRSVDSSKPQFIGQAGR---G------------NQEEF------GLLS--L------- 464 (533)
Q Consensus 415 ~~dWFlKvDDDTYVnvdNL~~~L~~~dpseplYiG~~~~---~------------~~~ey------~~~~--~------- 464 (533)
+.+|+++.|+|+.+..+-|..+++.+.......+|-... . ....+ .... .
T Consensus 196 ~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (570)
T 2d7i_A 196 TGDVITFLDSHCEANVNWLPPLLDRIARNRKTIVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIPIPPELQKADP 275 (570)
T ss_dssp CSSEEEECCSSEEECTTCSHHHHHHHHHCTTEEEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEECCCTTTCCSST
T ss_pred CCCEEEEEcCCccccccHHHHHHHHHHhCCCEEEeeeeeccCCCchhhccccCCcccccccccccccccccchhhhccCC
Confidence 679999999999998776666666443222333332100 0 00000 0000 0
Q ss_pred --CCCCCCccCCCceeeCHHHHHHHHHhHHHhhccCCCCchhHHHHHHHHhccCCce
Q psy6218 465 --EYDENFCMGGPGVIMSRATLALVAPHIKYCLKNLYTTHEDVELGRCVQKFAGIPC 519 (533)
Q Consensus 465 --~~~~~Y~sGGAGYVLSr~aLrkL~~~~~~C~~~~~~~~EDV~LG~CL~~~lGV~~ 519 (533)
....+++. |+.+++++++++++--. +.- ......||+.+..=+.. .|...
T Consensus 276 ~~~~~~~~~~-g~~~~irr~~~~~iGgf-De~--~~~~g~ED~dl~~Rl~~-~G~~i 327 (570)
T 2d7i_A 276 SDPFESPVMA-GGLFAVDRKWFWELGGY-DPG--LEIWGGEQYEISFKVWM-CGGRM 327 (570)
T ss_dssp TSCEECSSCC-SSSEEEEHHHHHHTTSS-CTT--CCSSSSHHHHHHHHHHH-TTCEE
T ss_pred Ccceeccccc-ceEEEEEHHHHHhcCCC-CCc--ccccCcchHHHHHHHHh-CCCeE
Confidence 00123344 47899999999988531 111 01122799999877776 57553
No 7
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=24.34 E-value=70 Score=34.21 Aligned_cols=34 Identities=12% Similarity=0.090 Sum_probs=25.9
Q ss_pred HHHHHHhCCCCceEEEEcCCccccHHHHHHHHhcCC
Q psy6218 406 QYMWERYGDKYEWFMRADDDLYVRGERLARMLRSVD 441 (533)
Q Consensus 406 ~~l~e~~~~~~dWFlKvDDDTYVnvdNL~~~L~~~d 441 (533)
....+.. +.+|++..|+|+.+..+-|..+++.+.
T Consensus 167 N~g~~~a--~g~~v~~lD~D~~~~~~~l~~~~~~~~ 200 (625)
T 2z86_A 167 NLGLRAA--KYNYVAILDCDMAPNPLWVQSYMELLA 200 (625)
T ss_dssp HHHHHHC--CSSEEEEECTTEEECTTHHHHHHHHHH
T ss_pred HHHHHhC--CcCEEEEECCCCCCCHHHHHHHHHHHh
Confidence 3444433 689999999999998888888777553
No 8
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=17.24 E-value=85 Score=32.74 Aligned_cols=26 Identities=15% Similarity=0.106 Sum_probs=22.0
Q ss_pred CCceEEEEcCCccccHHHHHHHHhcC
Q psy6218 415 KYEWFMRADDDLYVRGERLARMLRSV 440 (533)
Q Consensus 415 ~~dWFlKvDDDTYVnvdNL~~~L~~~ 440 (533)
+.+|+++.|+|+.+..+-|..+++.+
T Consensus 146 ~gd~i~flD~D~~~~p~~L~~ll~~~ 171 (501)
T 2ffu_A 146 QAKVLTFLDSHCECNEHWLEPLLERV 171 (501)
T ss_dssp CSSEEEECCSSEEECTTCHHHHHHHH
T ss_pred CCCEEEEECCCcccCccHHHHHHHHH
Confidence 68999999999999887777777654
No 9
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=15.89 E-value=40 Score=34.83 Aligned_cols=26 Identities=12% Similarity=0.060 Sum_probs=21.9
Q ss_pred CCceEEEEcCCccccHHHHHHHHhcC
Q psy6218 415 KYEWFMRADDDLYVRGERLARMLRSV 440 (533)
Q Consensus 415 ~~dWFlKvDDDTYVnvdNL~~~L~~~ 440 (533)
+.+|+++.|+|+.+..+-|..+++.+
T Consensus 114 ~gd~i~flD~D~~~~p~~L~~ll~~~ 139 (472)
T 1xhb_A 114 RGQVITFLDAHCECTAGWLEPLLARI 139 (472)
T ss_dssp CSSEEEEEESSEEECTTCHHHHHHHH
T ss_pred cCCeEEEECCCeEeCccHHHHHHHHH
Confidence 68999999999999887777777654
No 10
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=14.33 E-value=91 Score=28.15 Aligned_cols=27 Identities=22% Similarity=0.278 Sum_probs=22.8
Q ss_pred CCceEEEEcCCccccHHHHHHHHhcCC
Q psy6218 415 KYEWFMRADDDLYVRGERLARMLRSVD 441 (533)
Q Consensus 415 ~~dWFlKvDDDTYVnvdNL~~~L~~~d 441 (533)
+.+|+++.|+|.++..+.|..+++.+.
T Consensus 84 ~g~~i~~lD~Dd~~~~~~l~~l~~~~~ 110 (240)
T 3bcv_A 84 TGEYVAFCDSDDYVDSDMYMTMYNVAQ 110 (240)
T ss_dssp CSSEEEECCTTCCCCTTHHHHHHHHHH
T ss_pred CCCEEEEECCCCcCCHHHHHHHHHHHH
Confidence 679999999999998888887777553
Done!