BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6222
(863 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 182 bits (462), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 121/391 (30%), Positives = 192/391 (49%), Gaps = 25/391 (6%)
Query: 304 ALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRD 363
AL++ V+ + IG+LD++GFE + + E CIN E +Q +N H+FK E
Sbjct: 422 ALHSTVKQHS--FIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMK 479
Query: 364 ENIHSDVEVDYVDNVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRL 422
E I + +D+ DN PCI+LI + + G+L +LD EC + +G+ +T+ K+ H + L
Sbjct: 480 EQIPWTL-IDFYDNQPCINLIEA-KMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCAL 537
Query: 423 FDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSE 482
F+ + + F I+HFA +V Y FLE NKD V ++ + V K + F LF E
Sbjct: 538 FEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVL-KSSKKFKLLPELFQDE 596
Query: 483 LKALYSLETVPRG-ISFRISPTSHSDLLNGD---EPVSTLTQDFHTRLDNLLRSLVHARP 538
KA+ P G + +P + G E T+ F L L+ +L P
Sbjct: 597 EKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTP 656
Query: 539 HFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAP 598
H+VRC+K N + FD ++Q+R+ VLET+ + A G+P R ++ F +RYR+L
Sbjct: 657 HYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLM- 715
Query: 599 FCKLRRTEDRLTEDCLLILQCVEEEHMKSPLLTQSEVSTSWVIGKRHIFLSEGIRQQLEM 658
+ +D L++ ++ K+ L + GK IF G LE
Sbjct: 716 -----KQKDVLSD---------RKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEK 761
Query: 659 LRSDTRHRAAVLIQAVWRGTYARKRWPLLRR 689
+R+D A + IQ RG RK++ +RR
Sbjct: 762 IRADKLRAACIRIQKTIRGWLMRKKYMRMRR 792
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 189/381 (49%), Gaps = 29/381 (7%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDYVD 376
IG+LD++GFE + + E CIN E +Q +N H+FK E E I + +D+ D
Sbjct: 433 IGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKEQIPWTL-IDFYD 491
Query: 377 NVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPVDARCFTI 435
N PCI+LI + + G+L +LD EC + +G+ +T+ K+ H + LF+ + + F I
Sbjct: 492 NQPCINLIEA-KMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFEKPRLSNKAFII 550
Query: 436 QHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRG 495
+HFA +V Y FLE NKD V ++ + V K + F LF E KA+ P G
Sbjct: 551 KHFADKVEYQCEGFLEKNKDTVYEEQIKVL-KSSKKFKLLPELFQDEEKAISPTSATPSG 609
Query: 496 -ISFRISPTSHSDLLNGD---EPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKANSSET 551
+ +P + G E T+ F L L+ +L PH+VRC+K N +
Sbjct: 610 RVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYVRCIKPNDFKF 669
Query: 552 SGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTEDRLT- 610
FD ++Q+R+ VLET+ + A G+P R ++ F +RYR+L + +D L+
Sbjct: 670 PFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLM------KQKDVLSD 723
Query: 611 --EDCLLILQCVEEEHMKSPLLTQSEVSTSWVIGKRHIFLSEGIRQQLEMLRSDTRHRAA 668
+ C +L+ + +L + + + GK IF G LE +R+D A
Sbjct: 724 RKQTCKNVLEKL--------ILDKDK----YQFGKTKIFFRAGQVAYLEKIRADKLRAAC 771
Query: 669 VLIQAVWRGTYARKRWPLLRR 689
+ IQ RG RK++ +RR
Sbjct: 772 IRIQKTIRGWLMRKKYMRMRR 792
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 179/364 (49%), Gaps = 25/364 (6%)
Query: 304 ALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRD 363
AL++ V+ + IG+LD++GFE + + E CIN E +Q +N H+FK E
Sbjct: 422 ALHSTVKQHS--FIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMK 479
Query: 364 ENIHSDVEVDYVDNVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRL 422
E I + +D+ DN PCI+LI + + G+L +LD EC + +G+ +T+ K+ H + L
Sbjct: 480 EQIPWTL-IDFYDNQPCINLIEA-KMGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCAL 537
Query: 423 FDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSE 482
F+ + + F I+HFA +V Y FLE NKD V ++ + V K + F LF E
Sbjct: 538 FEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVL-KSSKKFKLLPELFQDE 596
Query: 483 LKALYSLETVPRG-ISFRISPTSHSDLLNGD---EPVSTLTQDFHTRLDNLLRSLVHARP 538
KA+ P G + +P + G E T+ F L L+ +L P
Sbjct: 597 EKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTP 656
Query: 539 HFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAP 598
H+VRC+K N + FD ++Q+R+ VLET+ + A G+P R ++ F +RYR+L
Sbjct: 657 HYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLM- 715
Query: 599 FCKLRRTEDRLTEDCLLILQCVEEEHMKSPLLTQSEVSTSWVIGKRHIFLSEGIRQQLEM 658
+ +D L++ ++ K+ L + GK IF G LE
Sbjct: 716 -----KQKDVLSD---------RKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEK 761
Query: 659 LRSD 662
+R+D
Sbjct: 762 IRAD 765
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
Length = 697
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 202/484 (41%), Gaps = 95/484 (19%)
Query: 132 VEDAARFQAWKACLGVLGIPFMDXXXXXXXXXXX---GNVQFVDKSSSSGNNGTVTEVGV 188
++D+ F+ + LG+ D GN+ F + ++ GT T V V
Sbjct: 240 IDDSGEFKIIVKAMETLGLKESDQNSIWRILAAILHIGNITFAE--AAEQRTGTTT-VKV 296
Query: 189 NGESTLNSVASLLGVPSASL-----FRGITTRTHNARGQLVKSLCDANMSNMTRDCLAKA 243
+ +L + AS L SL +R I+T R +++ D N + +RD LAKA
Sbjct: 297 SDTKSLAAAASCLKTDQQSLSIALCYRSISTGV-GKRCEVISVPMDCNQAAYSRDALAKA 355
Query: 244 LYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQADVASQHASTVGTAGSKSSKSMA 303
LY R +V + N++ + ++ +G
Sbjct: 356 LYERLFNWLVSKINTI---------------------INCTTEKGPVIG----------- 383
Query: 304 ALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRD 363
ILD++GFE + + E L IN C E +Q + KS E
Sbjct: 384 ---------------ILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVR 428
Query: 364 ENIHSDVEVDYVDNVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRL 422
E I ++Y +N P +LI GL+S+LD C + + T +T+L + Q NP L
Sbjct: 429 EGIEWK-NIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFEKNPHL 487
Query: 423 -----FDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATH 477
+ + CF ++H+AG V YD FL+ NKD + DL+S
Sbjct: 488 QSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQS---------- 537
Query: 478 LFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHAR 537
S + + +G+ PT D + P + +Q F ++ L+ +L+
Sbjct: 538 ----------SSDPLVQGL---FPPTRPED--SKKRPETAGSQ-FRNAMNALITTLLACS 581
Query: 538 PHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLA 597
PH+VRC+K+N ++ +G D V Q+R L +LE V + G+ R+ + F RY++L
Sbjct: 582 PHYVRCIKSNDNKQAGVIDEDRVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKML- 640
Query: 598 PFCK 601
CK
Sbjct: 641 --CK 642
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|B Chain B, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|C Chain C, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|D Chain D, Motor Domain Of Myoe, A Class-I Myosin
Length = 697
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 201/484 (41%), Gaps = 95/484 (19%)
Query: 132 VEDAARFQAWKACLGVLGIPFMDXXXXXXXXXXX---GNVQFVDKSSSSGNNGTVTEVGV 188
++D+ F+ + LG+ D GN+ F + ++ GT T V V
Sbjct: 240 IDDSGEFKIIVKAMETLGLKESDQNSIWRILAAILHIGNITFAE--AAEQRTGTTT-VKV 296
Query: 189 NGESTLNSVASLLGVPSASL-----FRGITTRTHNARGQLVKSLCDANMSNMTRDCLAKA 243
+ +L + AS L SL +R I+T R ++ D N + +RD LAKA
Sbjct: 297 SDTKSLAAAASCLKTDQQSLSIALCYRSISTGV-GKRCSVISVPMDCNQAAYSRDALAKA 355
Query: 244 LYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQADVASQHASTVGTAGSKSSKSMA 303
LY R +V + N++ + ++ +G
Sbjct: 356 LYERLFNWLVSKINTI---------------------INCTTEKGPVIG----------- 383
Query: 304 ALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRD 363
ILD++GFE + + E L IN C E +Q + KS E
Sbjct: 384 ---------------ILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQEEYVR 428
Query: 364 ENIHSDVEVDYVDNVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRL 422
E I ++Y +N P +LI GL+S+LD C + + T +T+L + Q NP L
Sbjct: 429 EGIEWK-NIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFEKNPHL 487
Query: 423 -----FDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATH 477
+ + CF ++H+AG V YD FL+ NKD + DL+S
Sbjct: 488 QSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQS---------- 537
Query: 478 LFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHAR 537
S + + +G+ PT D + P + +Q F ++ L+ +L+
Sbjct: 538 ----------SSDPLVQGL---FPPTRPED--SKKRPETAGSQ-FRNAMNALITTLLACS 581
Query: 538 PHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLA 597
PH+VRC+K+N ++ +G D V Q+R L +LE V + G+ R+ + F RY++L
Sbjct: 582 PHYVRCIKSNDNKQAGVIDEDRVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKML- 640
Query: 598 PFCK 601
CK
Sbjct: 641 --CK 642
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 130/509 (25%), Positives = 203/509 (39%), Gaps = 91/509 (17%)
Query: 189 NGESTLNSVASLLGVPSASLFRGITTRTHNARGQLVKSLCDANMSNMTRDCLAKALYCRT 248
+G + VA LLGV + L + + + V + + + LAK+LY R
Sbjct: 378 DGTAEAEKVAFLLGVNAGDLLKCLLKPKIKVGTEYVTQGRNKDQVTNSIAALAKSLYDRM 437
Query: 249 VATIVRRANSLKRXXXXXXXXXXDSNESVHNQADVASQHASTVGTAGSKSSKSMAALNNA 308
+VRR N T +K+ +
Sbjct: 438 FNWLVRRVNQ----------------------------------TLDTKAKRQFF----- 458
Query: 309 VRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHS 368
IG+LD+ GFE + E LCIN E +Q F+N HMF E + E I
Sbjct: 459 --------IGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKKEGIVW 510
Query: 369 DVEVDY-VDNVPCIDLISSLRTGLLSMLDVECSLRGTAET-YLGKVKAQHR-HNPRLFDP 425
+ +D+ +D CI+LI G+LS+L+ EC ++T + K+ H NP P
Sbjct: 511 EF-IDFGLDLQACIELIEK-PMGILSILEEECMFPKASDTSFKNKLYDNHLGKNPMFGKP 568
Query: 426 KPVDARC----FTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGS 481
KP A C F + H+AG V Y + +L+ NKD + +++V + S
Sbjct: 569 KPPKAGCAEAHFCLHHYAGSVSYSIAGWLDKNKDPINENVVELLQ-------------NS 615
Query: 482 ELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFV 541
+ + L T PR I T++ L+ L+++L PHFV
Sbjct: 616 KEPIVKMLFTPPR-----ILTPGGKKKKGKSAAFQTISSVHKESLNKLMKNLYSTHPHFV 670
Query: 542 RCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCK 601
RC+ N +T G D V+ Q+R VLE + + G+P+R+ + F RY +LAP
Sbjct: 671 RCIIPNELKTPGLIDAALVLHQLRCNGVLEGIRICRKGFPNRIIYSEFKQRYSILAPNAV 730
Query: 602 LRRTEDR--LTEDCLLILQCVEEEHMKSPLLTQSEVSTSWVIGKRHIFLSEGIRQQLEML 659
D +T+ L LQ E+ +G +F G+ LE +
Sbjct: 731 PSGFADGKVVTDKALSALQLDPNEYR---------------LGNTKVFFKAGVLGMLEDM 775
Query: 660 RSDTRHRAAVLIQAVWRGTYARKRWPLLR 688
R + + + QA RG RK + L+
Sbjct: 776 RDERLSKIISMFQAHIRGYLMRKAYKKLQ 804
>pdb|2W4A|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 840
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 141/605 (23%), Positives = 232/605 (38%), Gaps = 115/605 (19%)
Query: 107 VKLHLESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGIPFMDXXXXXX---XXX 163
+ + L + P + Y+ G+ ++D A + + +LG +
Sbjct: 297 IDMLLITTNPYDYHYVSQGEITVPSIDDQEELMATDSAIDILGFSADEKTAIYKLTGAVM 356
Query: 164 XXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQL 223
GN++F K TEV + A L+G+ SA L + + +
Sbjct: 357 HYGNLKFKQKQREEQAEPDGTEVA-------DKAAYLMGLNSAELLKALCYPRVKVGNEF 409
Query: 224 VKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQADV 283
V + + + LAKA+Y + +V R N Q D
Sbjct: 410 VTKGQTVSQVHNSVGALAKAVYEKMFLWMVIRIN---------------------QQLDT 448
Query: 284 ASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAE 343
+ IG+LD+ GFE + E LCIN E
Sbjct: 449 --------------------------KQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNE 482
Query: 344 TMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLRTGLLSMLDVECSL- 401
+Q F+N HMF E + E I + +D+ +D CI+LI G+ S+L+ EC
Sbjct: 483 KLQQFFNHHMFVLEQEEYKKEGIEWEF-IDFGMDLAACIELIEK-PMGIFSILEEECMFP 540
Query: 402 RGTAETYLGKVKAQHRHNPRLFD-PKPVDARC---FTIQHFAGRVLYDTSDFLETNKDVV 457
+ T ++ K+ QH F PKP + F++ H+AG V Y+ S +LE NKD +
Sbjct: 541 KATDTSFKNKLYDQHLGKSNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEKNKDPL 600
Query: 458 PDDLVSVFHK---QTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEP 514
+ ++ ++ K +T FAT+ +E SF+
Sbjct: 601 NETVIGLYQKSSVKTLALLFATYGGEAEGGGGKKGGKKKGS-SFQ--------------- 644
Query: 515 VSTLTQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVN 574
T++ F L+ L+ +L PHFVRC+ N ++T G + V+ Q+R VLE +
Sbjct: 645 --TVSALFRENLNKLMANLRSTHPHFVRCIIPNETKTPGAMEHELVLHQLRCNGVLEGIR 702
Query: 575 LMAGGYPHRMRFKAFNARYRLL-------APFCKLRRTEDRLTEDCLLILQCVEEEHMKS 627
+ G+P R+ + F RYR+L F ++ ++L L ++ +H
Sbjct: 703 ICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMDSKKASEKL-------LGSIDVDH--- 752
Query: 628 PLLTQSEVSTSWVIGKRHIFLSEGIRQQLEMLRSDTRHRAAVLIQAVWRGTYARKRWPLL 687
T + G +F G+ LE +R D QA RG R +
Sbjct: 753 ---------TQYRFGHTKVFFKAGLLGLLEEMRDDKLAEIITRTQARCRGFLMRVEY--- 800
Query: 688 RRNLE 692
RR +E
Sbjct: 801 RRMVE 805
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Bef3
pdb|1MND|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Alf4
pdb|1MNE|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mg-Pyrophosphate
pdb|1VOM|A Chain A, Complex Between Dictyostelium Myosin And Mgadp And
Vanadate At 1.9a Resolution
Length = 762
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 129/500 (25%), Positives = 209/500 (41%), Gaps = 95/500 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D F+ + + ++G M
Sbjct: 296 LHLAGPESFNYLN----QSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQMSIFKIIAGI 351
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 352 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 403
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V++ N++
Sbjct: 404 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNV----------------------- 440
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ S+ A+ IG+LD+ GFE K + E LCIN
Sbjct: 441 LCSERAAYF-------------------------IGVLDISGFEIFKVNSFEQLCINYTN 475
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 476 EKLQQFFNHHMFKVEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 534
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 535 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 593
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF P S G ++
Sbjct: 594 QDLELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVA 631
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
Q + +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 632 AQ-YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRK 690
Query: 579 GYPHRMRFKAFNARYRLLAP 598
G+P+R+ + F RY LLAP
Sbjct: 691 GFPNRIIYADFVKRYYLLAP 710
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 175/369 (47%), Gaps = 34/369 (9%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-V 375
+GILD+ GFE + + E LCIN E +Q +N MF E + E I +D+ +
Sbjct: 429 LGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTF-LDFGL 487
Query: 376 DNVPCIDLISSLRT--GLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPV-DAR 431
D PCIDLI GLL++LD EC + T ++++ KV + +P+ P+ + D
Sbjct: 488 DLQPCIDLIERPANPPGLLALLDEECWFPKATDKSFVEKVAQEQGGHPKFQRPRHLRDQA 547
Query: 432 CFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKALYSLET 491
F++ H+AG+V Y +++L N D + D++ ++ H+ T T +++ + LE
Sbjct: 548 DFSVLHYAGKVDYKANEWLMKNMDPLNDNVAALLHQSTDRL---TAEIWKDVEGIVGLEQ 604
Query: 492 VPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKANSSET 551
V + T+ Q + L L+ +L + P FVRC+ N +
Sbjct: 605 VSSLGDGPPGGRPRRGMFR------TVGQLYKESLSRLMATLSNTNPSFVRCIVPNHEKR 658
Query: 552 SGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTEDRLTE 611
+GK + V+ Q+R VLE + + G+P+R+ F+ F RY +L P + D +
Sbjct: 659 AGKLEPRLVLDQLRCNGVLEGIRICRQGFPNRILFQEFRQRYEILTPNAIPKGFMDG-KQ 717
Query: 612 DCLLILQCVEEEHMKSPLLTQSEVSTSWVIGKRHIFLSEGIRQQLEMLR------SDTRH 665
C ++Q +E + P L + +G+ IF G+ QLE R SD
Sbjct: 718 ACEKMIQALELD----PNL--------YRVGQSKIFFRAGVLAQLEEERASEQTKSDYLK 765
Query: 666 RAAVLIQAV 674
RA L+Q +
Sbjct: 766 RANELVQWI 774
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/380 (27%), Positives = 184/380 (48%), Gaps = 26/380 (6%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-V 375
+GILD+ GFE + + E LCIN E +Q +N MF E + E I + +D+ +
Sbjct: 460 LGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNF-IDFGL 518
Query: 376 DNVPCIDLISSLRT--GLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPV-DAR 431
D PCI+LI G+L++LD EC + T +++ K+ + ++ + K + D
Sbjct: 519 DLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKT 578
Query: 432 CFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKALYSLET 491
F I H+AG+V Y+ S +L N D + D++ S+ ++ + F L+ ++ + L+
Sbjct: 579 EFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSD--KFVADLW-KDVDRIVGLDQ 635
Query: 492 VPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKANSSET 551
+ + + S + T+ Q + +L L+ +L + P+FVRC+ N +
Sbjct: 636 MAKMTESSLPSASKTK----KGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKR 691
Query: 552 SGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTEDRLTE 611
+GK D V+ Q+R VLE + + G+P+R+ F+ F RY +LA + D +
Sbjct: 692 AGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDG-KQ 750
Query: 612 DCLLILQCVEEEHMKSPLLTQSEVSTSWVIGKRHIFLSEGIRQQLEMLRSDTRHRAAVLI 671
C+L+++ +E + P L + IG+ IF G+ LE R +
Sbjct: 751 ACILMIKALELD----PNL--------YRIGQSKIFFRTGVLAHLEEERDLKITDVIIAF 798
Query: 672 QAVWRGTYARKRWPLLRRNL 691
QA RG ARK + ++ L
Sbjct: 799 QAQCRGYLARKAFAKRQQQL 818
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Alf4
Length = 770
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 208/500 (41%), Gaps = 95/500 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D+ F+ + + ++G M
Sbjct: 296 LHLAGPESFNYLN----QSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGI 351
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 352 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 403
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V++ N++
Sbjct: 404 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL---------------------- 441
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ A +G +LD++GFE K + E LCIN
Sbjct: 442 CQERKAYFIG--------------------------VLDIYGFEIFKVNSFEQLCINYTN 475
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 476 EKLQQFFNHHMFKLEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 534
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 535 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 593
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF P S G ++
Sbjct: 594 QDLELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVA 631
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
Q + +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 632 AQ-YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRK 690
Query: 579 GYPHRMRFKAFNARYRLLAP 598
G+P+R+ + F RY LLAP
Sbjct: 691 GFPNRIIYADFVKRYYLLAP 710
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Befx
Length = 770
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 208/500 (41%), Gaps = 95/500 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D+ F+ + + ++G M
Sbjct: 296 LHLAGPESFNYLN----QSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGI 351
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 352 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 403
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V++ N++
Sbjct: 404 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL---------------------- 441
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ A +G +LD++GFE K + E LCIN
Sbjct: 442 CQERKAYFIG--------------------------VLDIYGFEIFKVNSFEQLCINYTN 475
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 476 EKLQQFFNHHMFKLEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 534
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 535 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 593
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF P S G ++
Sbjct: 594 QDLELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVA 631
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
Q + +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 632 AQ-YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRK 690
Query: 579 GYPHRMRFKAFNARYRLLAP 598
G+P+R+ + F RY LLAP
Sbjct: 691 GFPNRIIYADFVKRYYLLAP 710
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 26/371 (7%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-V 375
+GILD+ GFE + + E LCIN E +Q +N MF E + E I + +D+ +
Sbjct: 460 LGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNF-IDFGL 518
Query: 376 DNVPCIDLISSLRT--GLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPV-DAR 431
D PCI+LI G+L++LD EC + T +++ K+ + ++ + K + D
Sbjct: 519 DLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKT 578
Query: 432 CFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKALYSLET 491
F I H+AG+V Y+ S +L N D + D++ S+ ++ + F L+ ++ + L+
Sbjct: 579 EFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSD--KFVADLW-KDVDRIVGLDQ 635
Query: 492 VPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKANSSET 551
+ + + S + T+ Q + +L L+ +L + P+FVRC+ N +
Sbjct: 636 MAKMTESSLPSASKTK----KGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKR 691
Query: 552 SGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTEDRLTE 611
+GK D V+ Q+R VLE + + G+P+R+ F+ F RY +LA + D +
Sbjct: 692 AGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDG-KQ 750
Query: 612 DCLLILQCVEEEHMKSPLLTQSEVSTSWVIGKRHIFLSEGIRQQLEMLRSDTRHRAAVLI 671
C+L+++ +E + P L + IG+ IF G+ LE R +
Sbjct: 751 ACILMIKALELD----PNL--------YRIGQSKIFFRTGVLAHLEEERDLKITDVIIAF 798
Query: 672 QAVWRGTYARK 682
QA RG ARK
Sbjct: 799 QAQCRGYLARK 809
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 26/371 (7%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-V 375
+GILD+ GFE + + E LCIN E +Q +N MF E + E I + +D+ +
Sbjct: 460 LGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNF-IDFGL 518
Query: 376 DNVPCIDLISSLRT--GLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPV-DAR 431
D PCI+LI G+L++LD EC + T +++ K+ + ++ + K + D
Sbjct: 519 DLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKT 578
Query: 432 CFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKALYSLET 491
F I H+AG+V Y+ S +L N D + D++ S+ ++ + F L+ ++ + L+
Sbjct: 579 EFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSD--KFVADLW-KDVDRIVGLDQ 635
Query: 492 VPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKANSSET 551
+ + + S + T+ Q + +L L+ +L + P+FVRC+ N +
Sbjct: 636 MAKMTESSLPSASKT----KKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKR 691
Query: 552 SGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTEDRLTE 611
+GK D V+ Q+R VLE + + G+P+R+ F+ F RY +LA + D +
Sbjct: 692 AGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDG-KQ 750
Query: 612 DCLLILQCVEEEHMKSPLLTQSEVSTSWVIGKRHIFLSEGIRQQLEMLRSDTRHRAAVLI 671
C+L+++ +E + P L + IG+ IF G+ LE R +
Sbjct: 751 ACILMIKALELD----PNL--------YRIGQSKIFFRTGVLAHLEEERDLKITDVIIAF 798
Query: 672 QAVWRGTYARK 682
QA RG ARK
Sbjct: 799 QAQCRGYLARK 809
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 186/381 (48%), Gaps = 26/381 (6%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-V 375
+GILD+ GFE + + E LCIN E +Q +N MF E + E I + +D+ +
Sbjct: 460 LGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNF-IDFGL 518
Query: 376 DNVPCIDLISSLRT--GLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPV-DAR 431
D PCI+LI G+L++LD EC + T +++ K+ + ++ + K + D
Sbjct: 519 DLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKT 578
Query: 432 CFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKALYSLET 491
F I H+AG+V Y+ S +L N D + D++ S+ ++ + F L+ ++ + L+
Sbjct: 579 EFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSD--KFVADLW-KDVDRIVGLDQ 635
Query: 492 VPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKANSSET 551
+ + + S + G T+ Q + +L L+ +L + P+FVRC+ N +
Sbjct: 636 MAKMTESSLPSASKTK--KG--MFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKR 691
Query: 552 SGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTEDRLTE 611
+GK D V+ Q+R VLE + + G+P+R+ F+ F RY +LA + D +
Sbjct: 692 AGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDG-KQ 750
Query: 612 DCLLILQCVEEEHMKSPLLTQSEVSTSWVIGKRHIFLSEGIRQQLEMLRSDTRHRAAVLI 671
C+L+++ +E + P L + IG+ IF G+ LE R +
Sbjct: 751 ACILMIKALELD----PNL--------YRIGQSKIFFRTGVLAHLEEERDLKITDVIIAF 798
Query: 672 QAVWRGTYARKRWPLLRRNLE 692
QA RG ARK + ++ LE
Sbjct: 799 QAQCRGYLARKAFAKRQQQLE 819
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 132 bits (331), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/371 (28%), Positives = 180/371 (48%), Gaps = 26/371 (7%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-V 375
+GILD+ GFE + + E LCIN E +Q +N MF E + E I + +D+ +
Sbjct: 460 LGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNF-IDFGL 518
Query: 376 DNVPCIDLISSLRT--GLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPV-DAR 431
D PCI+LI G+L++LD EC + T +++ K+ + ++ + K + D
Sbjct: 519 DLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKT 578
Query: 432 CFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKALYSLET 491
F I H+AG+V Y+ S +L N D + D++ S+ ++ + F L+ ++ + L+
Sbjct: 579 EFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSD--KFVADLW-KDVDRIVGLDQ 635
Query: 492 VPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKANSSET 551
+ + + S + T+ Q + +L L+ +L + P+FVRC+ N +
Sbjct: 636 MAKMTESSLPSASKT----KKGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKR 691
Query: 552 SGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTEDRLTE 611
+GK D V+ Q+R VLE + + G+P+R+ F+ F RY +LA + D +
Sbjct: 692 AGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDG-KQ 750
Query: 612 DCLLILQCVEEEHMKSPLLTQSEVSTSWVIGKRHIFLSEGIRQQLEMLRSDTRHRAAVLI 671
C+L+++ +E + P L + IG+ IF G+ LE R +
Sbjct: 751 ACILMIKALELD----PNL--------YRIGQSKIFFRTGVLAHLEEERDLKITDVIIAF 798
Query: 672 QAVWRGTYARK 682
QA RG ARK
Sbjct: 799 QAQCRGYLARK 809
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of
Dictyostellium Myosin Ii
pdb|1FMW|A Chain A, Crystal Structure Of The Mgatp Complex For The Motor
Domain Of Dictyostelium Myosin Ii
Length = 761
Score = 131 bits (329), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 207/500 (41%), Gaps = 95/500 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D+ F+ + + ++G M
Sbjct: 296 LHLAGPESFNYLN----QSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGI 351
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 352 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 403
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V++ N++
Sbjct: 404 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL---------------------- 441
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ A +G +LD+ GFE K + E LCIN
Sbjct: 442 CQERKAYFIG--------------------------VLDISGFEIFKVNSFEQLCINYTN 475
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 476 EKLQQFFNHHMFKVEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 534
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 535 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 593
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF P S G ++
Sbjct: 594 QDLELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVA 631
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
Q + +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 632 AQ-YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRK 690
Query: 579 GYPHRMRFKAFNARYRLLAP 598
G+P+R+ + F RY LLAP
Sbjct: 691 GFPNRIIYADFVKRYYLLAP 710
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
pdb|2Y8I|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 207/500 (41%), Gaps = 95/500 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D+ F+ + + ++G M
Sbjct: 295 LHLAGPESFNYLN----QSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGI 350
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 351 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 402
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V++ N++
Sbjct: 403 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL---------------------- 440
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ A +G +LD+ GFE K + E LCIN
Sbjct: 441 CQERKAYFIG--------------------------VLDISGFEIFKVNSFEQLCINYTN 474
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 475 EKLQQFFNHHMFKLEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 533
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 534 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 592
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF P S G ++
Sbjct: 593 QDLELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVA 630
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
Q + +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 631 AQ-YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNAVLEGIRITRK 689
Query: 579 GYPHRMRFKAFNARYRLLAP 598
G+P+R+ + F RY LLAP
Sbjct: 690 GFPNRIIYADFVKRYYLLAP 709
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 207/500 (41%), Gaps = 95/500 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D F+ + + ++G M
Sbjct: 296 LHLAGPESFNYLN----QSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQMSIFKIIAGI 351
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 352 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 403
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V++ N++
Sbjct: 404 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL---------------------- 441
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ + A +G +LD+ GFE K + E LCIN
Sbjct: 442 CSERKAYFIG--------------------------VLDISGFEIFKVNSFEQLCINYTN 475
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 476 EKLQQFFNHHMFKVEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 534
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 535 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 593
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF P S G ++
Sbjct: 594 QDLELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVA 631
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
Q + +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 632 AQ-YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRK 690
Query: 579 GYPHRMRFKAFNARYRLLAP 598
G+P+R+ + F RY LLAP
Sbjct: 691 GFPNRIIYADFVKRYYLLAP 710
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed
With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A Gtpase
Domain, Determined As Myosin Fusion
Length = 776
Score = 130 bits (328), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 207/500 (41%), Gaps = 95/500 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D+ F+ + + ++G M
Sbjct: 307 LHLAGPESFNYLN----QSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGI 362
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 363 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 414
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V++ N++
Sbjct: 415 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL---------------------- 452
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ A +G +LD+ GFE K + E LCIN
Sbjct: 453 CQERKAYFIG--------------------------VLDISGFEIFKVNSFEQLCINYTN 486
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 487 EKLQQFFNHHMFKLEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 545
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 546 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 604
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF P S G ++
Sbjct: 605 QDLELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVA 642
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
Q + +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 643 AQ-YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRK 701
Query: 579 GYPHRMRFKAFNARYRLLAP 598
G+P+R+ + F RY LLAP
Sbjct: 702 GFPNRIIYADFVKRYYLLAP 721
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYK|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYL|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
Length = 762
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 207/500 (41%), Gaps = 95/500 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D+ F+ + + ++G M
Sbjct: 296 LHLAGPESFNYLN----QSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGI 351
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 352 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 403
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V++ N++
Sbjct: 404 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL---------------------- 441
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ A +G +LD+ GFE K + E LCIN
Sbjct: 442 CQERKAYFIG--------------------------VLDISGFEIFKVNSFEQLCINYTN 475
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 476 EKLQQFFNHHMFKLEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 534
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 535 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 593
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF P S G ++
Sbjct: 594 QDLELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVA 631
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
Q + +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 632 AQ-YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRK 690
Query: 579 GYPHRMRFKAFNARYRLLAP 598
G+P+R+ + F RY LLAP
Sbjct: 691 GFPNRIIYADFVKRYYLLAP 710
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain
From Dictyostelium Discoideum Fused To The Gtpase Domain
Of Dynamin 1 From Rattus Norvegicus
Length = 776
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 207/500 (41%), Gaps = 95/500 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D+ F+ + + ++G M
Sbjct: 307 LHLAGPESFNYLN----QSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGI 362
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 363 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 414
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V++ N++
Sbjct: 415 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL---------------------- 452
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ A +G +LD+ GFE K + E LCIN
Sbjct: 453 CQERKAYFIG--------------------------VLDISGFEIFKVNSFEQLCINYTN 486
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 487 EKLQQFFNHHMFKLEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 545
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 546 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 604
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF P S G ++
Sbjct: 605 QDLELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVA 642
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
Q + +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 643 AQ-YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRK 701
Query: 579 GYPHRMRFKAFNARYRLLAP 598
G+P+R+ + F RY LLAP
Sbjct: 702 GFPNRIIYADFVKRYYLLAP 721
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 207/500 (41%), Gaps = 95/500 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D+ F+ + + ++G M
Sbjct: 296 LHLAGPESFNYLN----QSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGI 351
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 352 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 403
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V++ N++
Sbjct: 404 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL---------------------- 441
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ A +G +LD+ GFE K + E LCIN
Sbjct: 442 CQERKAYFIG--------------------------VLDISGFEIFKVNSFEQLCINYTN 475
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 476 EKLQQFFNHHMFKLEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 534
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 535 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 593
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF P S G ++
Sbjct: 594 QDLELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVA 631
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
Q + +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 632 AQ-YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRK 690
Query: 579 GYPHRMRFKAFNARYRLLAP 598
G+P+R+ + F RY LLAP
Sbjct: 691 GFPNRIIYADFVKRYYLLAP 710
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With M-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D0Y|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O-Nitrophenyl Aminoethyldiphosphate
Beryllium Fluoride.
pdb|1D0Z|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With P-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1A|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1B|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminopropyldiphosphate
Beryllium Trifluoride.
pdb|1D1C|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With N-Methyl-O-Nitrophenyl
Aminoethyldiphosphate Beryllium Trifluoride
Length = 761
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 207/500 (41%), Gaps = 95/500 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D+ F+ + + ++G M
Sbjct: 296 LHLAGPESFNYLN----QSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGI 351
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 352 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 403
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V++ N++
Sbjct: 404 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL---------------------- 441
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ A +G +LD+ GFE K + E LCIN
Sbjct: 442 CQERKAYFIG--------------------------VLDISGFEIFKVNSFEQLCINYTN 475
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 476 EKLQQFFNHHMFKLEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 534
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 535 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 593
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF P S G ++
Sbjct: 594 QDLELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVA 631
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
Q + +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 632 AQ-YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRK 690
Query: 579 GYPHRMRFKAFNARYRLLAP 598
G+P+R+ + F RY LLAP
Sbjct: 691 GFPNRIIYADFVKRYYLLAP 710
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And
Specificity For Myosin Ii
pdb|3BZ7|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ8|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ9|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
Length = 762
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 207/500 (41%), Gaps = 95/500 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D+ F+ + + ++G M
Sbjct: 296 LHLAGPESFNYLN----QSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGI 351
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 352 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 403
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V++ N++
Sbjct: 404 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL---------------------- 441
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ A +G +LD+ GFE K + E LCIN
Sbjct: 442 CQERKAYFIG--------------------------VLDISGFEIFKVNSFEQLCINYTN 475
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 476 EKLQQFFNHHMFKLEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 534
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 535 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 593
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF P S G ++
Sbjct: 594 QDLELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVA 631
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
Q + +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 632 AQ-YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRK 690
Query: 579 GYPHRMRFKAFNARYRLLAP 598
G+P+R+ + F RY LLAP
Sbjct: 691 GFPNRIIYADFVKRYYLLAP 710
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Resveratrol
Length = 788
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 126/498 (25%), Positives = 207/498 (41%), Gaps = 91/498 (18%)
Query: 109 LHLESYTPLNLSYL-QSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXXXX 164
LHL P + +YL QSG V D+ F+ + + ++G M
Sbjct: 307 LHLAG--PESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILH 364
Query: 165 XGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQLV 224
GN++F +K + G + ++ LN+ +++ GV + L + + A LV
Sbjct: 365 LGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLV 416
Query: 225 KSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQADVA 284
+ S+ +RD L KALY R +V++ N++
Sbjct: 417 AQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL----------------------CQ 454
Query: 285 SQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAET 344
+ A +G +LD+ GFE K + E LCIN E
Sbjct: 455 ERKAYFIG--------------------------VLDISGFEIFKVNSFEQLCINYTNEK 488
Query: 345 MQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECSL- 401
+Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 489 LQQFFNHHMFKLEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSVFP 547
Query: 402 RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVPDD 460
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD + D
Sbjct: 548 NATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD 606
Query: 461 LVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQ 520
L F + T LF P S G ++ Q
Sbjct: 607 LELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVAAQ 644
Query: 521 DFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGY 580
+ +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + + G+
Sbjct: 645 -YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGF 703
Query: 581 PHRMRFKAFNARYRLLAP 598
P+R+ + F RY LLAP
Sbjct: 704 PNRIIYADFVKRYYLLAP 721
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentabromopseudilin
pdb|2JJ9|A Chain A, Crystal Structure Of Myosin-2 In Complex With Adp-
Metavanadate
pdb|3MJX|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Blebbistatin
Length = 788
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 126/498 (25%), Positives = 207/498 (41%), Gaps = 91/498 (18%)
Query: 109 LHLESYTPLNLSYL-QSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXXXX 164
LHL P + +YL QSG V D+ F+ + + ++G M
Sbjct: 307 LHLAG--PESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILH 364
Query: 165 XGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQLV 224
GN++F +K + G + ++ LN+ +++ GV + L + + A LV
Sbjct: 365 LGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLV 416
Query: 225 KSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQADVA 284
+ S+ +RD L KALY R +V++ N++
Sbjct: 417 AQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL----------------------CQ 454
Query: 285 SQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAET 344
+ A +G +LD+ GFE K + E LCIN E
Sbjct: 455 ERKAYFIG--------------------------VLDISGFEIFKVNSFEQLCINYTNEK 488
Query: 345 MQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECSL- 401
+Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 489 LQQFFNHHMFKLEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSVFP 547
Query: 402 RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVPDD 460
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD + D
Sbjct: 548 NATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD 606
Query: 461 LVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQ 520
L F + T LF P S G ++ Q
Sbjct: 607 LELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVAAQ 644
Query: 521 DFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGY 580
+ +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + + G+
Sbjct: 645 -YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGF 703
Query: 581 PHRMRFKAFNARYRLLAP 598
P+R+ + F RY LLAP
Sbjct: 704 PNRIIYADFVKRYYLLAP 721
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 207/500 (41%), Gaps = 95/500 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D+ F+ + + ++G M
Sbjct: 295 LHLAGPESFNYLN----QSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGI 350
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 351 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 402
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V++ N++
Sbjct: 403 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL---------------------- 440
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ A +G +LD+ GFE K + E LCIN
Sbjct: 441 CQERKAYFIG--------------------------VLDISGFEIFKVNSFEQLCINYTN 474
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 475 EKLQQFFNHHMFKLEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 533
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 534 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 592
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF P S G ++
Sbjct: 593 QDLELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVA 630
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
Q + +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 631 AQ-YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNVVLEGIRITRK 689
Query: 579 GYPHRMRFKAFNARYRLLAP 598
G+P+R+ + F RY LLAP
Sbjct: 690 GFPNRIIYADFVKRYYLLAP 709
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated
Inhibition Of Myosin Motor Activity
pdb|4AE3|A Chain A, Crystal Structure Of Ammosamide 272:myosin-2 Motor Domain
Complex
Length = 776
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 126/498 (25%), Positives = 207/498 (41%), Gaps = 91/498 (18%)
Query: 109 LHLESYTPLNLSYL-QSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXXXX 164
LHL P + +YL QSG V D+ F+ + + ++G M
Sbjct: 295 LHLAG--PESFNYLNQSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGILH 352
Query: 165 XGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQLV 224
GN++F +K + G + ++ LN+ +++ GV + L + + A LV
Sbjct: 353 LGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRDLV 404
Query: 225 KSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQADVA 284
+ S+ +RD L KALY R +V++ N++
Sbjct: 405 AQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL----------------------CQ 442
Query: 285 SQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAET 344
+ A +G +LD+ GFE K + E LCIN E
Sbjct: 443 ERKAYFIG--------------------------VLDISGFEIFKVNSFEQLCINYTNEK 476
Query: 345 MQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECSL- 401
+Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 477 LQQFFNHHMFKLEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSVFP 535
Query: 402 RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVPDD 460
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD + D
Sbjct: 536 NATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQD 594
Query: 461 LVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQ 520
L F + T LF P S G ++ Q
Sbjct: 595 LELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVAAQ 632
Query: 521 DFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGY 580
+ +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + + G+
Sbjct: 633 -YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRKGF 691
Query: 581 PHRMRFKAFNARYRLLAP 598
P+R+ + F RY LLAP
Sbjct: 692 PNRIIYADFVKRYYLLAP 709
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e
Bound With Mgadp-Alf4
Length = 770
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 207/500 (41%), Gaps = 95/500 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D+ F+ + + ++G M
Sbjct: 296 LHLAGPESFNYLN----QSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGI 351
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 352 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 403
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V++ N++
Sbjct: 404 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL---------------------- 441
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ A +G +LD+ GFE K + E LCIN
Sbjct: 442 CQERKAYFIG--------------------------VLDIEGFEIFKVNSFEQLCINYTN 475
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 476 EKLQQFFNHHMFKLEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 534
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 535 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 593
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF P S G ++
Sbjct: 594 QDLELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVA 631
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
Q + +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 632 AQ-YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRK 690
Query: 579 GYPHRMRFKAFNARYRLLAP 598
G+P+R+ + F RY LLAP
Sbjct: 691 GFPNRIIYADFVKRYYLLAP 710
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
pdb|4DB1|B Chain B, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
Length = 783
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 140/577 (24%), Positives = 225/577 (38%), Gaps = 124/577 (21%)
Query: 115 TPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGIPFMDXXXXXXXXXXX---GNVQFV 171
P + +++ G+T ++DA A VLG + GN++F
Sbjct: 306 NPYDYAFISQGETTVASIDDAEELMATDNAFDVLGFTSEEKNSMYKLTGAIMHFGNMKFK 365
Query: 172 DKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGI------TTRTHNARGQLVK 225
K + +G + A L+G+ SA L +G+ + +GQ V+
Sbjct: 366 LKQREE-------QAEPDGTEEADKSAYLMGLNSADLLKGLCHPRVKVGNEYVTKGQNVQ 418
Query: 226 SLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQADVAS 285
+ A LAKA+Y R +V R N+
Sbjct: 419 QVIYAT------GALAKAVYERMFNWMVTRINA--------------------------- 445
Query: 286 QHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAETM 345
T +K + IG+LD+ GFE + E LCIN E +
Sbjct: 446 -------TLETKQPRQYF-------------IGVLDIAGFEIFDFNSFEQLCINFTNEKL 485
Query: 346 QHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLRTGLLSMLDVECSL-RG 403
Q F+N HMF E + E I +D+ +D CIDLI G++S+L+ EC +
Sbjct: 486 QQFFNHHMFVLEQEEYKKEGIEWTF-IDFGMDLQACIDLIEK-PMGIMSILEEECMFPKA 543
Query: 404 TAETYLGKV------KAQHRHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVV 457
T T+ K+ K+ + PR KP F++ H+AG V Y+ +L+ NKD +
Sbjct: 544 TDMTFKAKLFDNHLGKSANFQKPRNIKGKP--EAHFSLIHYAGIVDYNIIGWLQKNKDPL 601
Query: 458 PDDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGD-EPVS 516
+ +V ++ K S LK L +L G I + VS
Sbjct: 602 NETVVGLYQK-------------SSLKLLSTLFANYAGADAPIEKGKGKAKKGSSFQTVS 648
Query: 517 TLTQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLM 576
L ++ L+ L+ +L PHFVRC+ N +++ G D VM Q+R VLE + +
Sbjct: 649 ALHRE---NLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDNPLVMHQLRCNGVLEGIRIC 705
Query: 577 AGGYPHRMRFKAFNARYRLLAP-------FCKLRRTEDRLTEDCLLILQCVEEEHMKSPL 629
G+P+R+ + F RYR+L P F R+ ++L L ++ +H
Sbjct: 706 RKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKL-------LSSLDIDH----- 753
Query: 630 LTQSEVSTSWVIGKRHIFLSEGIRQQLEMLRSDTRHR 666
+ G +F G+ LE +R + R
Sbjct: 754 -------NQYKFGHTKVFFKAGLLGLLEEMRDERLSR 783
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With
Bound Mgadp-Befx
Length = 770
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 207/500 (41%), Gaps = 95/500 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D+ F+ + + ++G M
Sbjct: 296 LHLAGPESFNYLN----QSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGI 351
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 352 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 403
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V++ N++
Sbjct: 404 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL---------------------- 441
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ A +G +LD+ GFE K + E LCIN
Sbjct: 442 CEERKAYFIG--------------------------VLDIEGFEIFKVNSFEQLCINYTN 475
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 476 EKLQQFFNHHMFKLEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 534
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 535 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 593
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF P S G ++
Sbjct: 594 QDLELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVA 631
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
Q + +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 632 AQ-YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRK 690
Query: 579 GYPHRMRFKAFNARYRLLAP 598
G+P+R+ + F RY LLAP
Sbjct: 691 GFPNRIIYADFVKRYYLLAP 710
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With
Tribromodichloropseudilin
Length = 776
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 127/500 (25%), Positives = 206/500 (41%), Gaps = 95/500 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D+ F+ + + ++G M
Sbjct: 295 LHLAGPESFNYLN----QSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGI 350
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 351 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 402
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V + N++
Sbjct: 403 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVL---------------------- 440
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ A +G +LD+ GFE K + E LCIN
Sbjct: 441 CQERKAYFIG--------------------------VLDISGFEIFKVNSFEQLCINYTN 474
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 475 EKLQQFFNHHMFKLEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 533
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 534 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 592
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF P S G ++
Sbjct: 593 QDLELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVA 630
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
Q + +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 631 AQ-YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRK 689
Query: 579 GYPHRMRFKAFNARYRLLAP 598
G+P+R+ + F RY LLAP
Sbjct: 690 GFPNRIIYADFVKRYYLLAP 709
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 128 bits (321), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 135/585 (23%), Positives = 227/585 (38%), Gaps = 108/585 (18%)
Query: 120 SYLQSGDTRQDDVEDAARFQAWKACLGVLGIPFMDXXXX---XXXXXXXGNVQFVDKSSS 176
S++ G D+++D F+ +LG + G ++F +
Sbjct: 310 SFINQGCLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPRE 369
Query: 177 SGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQLVKSLCDANMSNMT 236
+ +G + VA L G+ + L + + ++V + N +
Sbjct: 370 E-------QAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNS 422
Query: 237 RDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQADVASQHASTVGTAGS 296
LAK+LY R +VRR N T +
Sbjct: 423 VGALAKSLYDRMFNWLVRRVNK----------------------------------TLDT 448
Query: 297 KSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKS 356
K+ ++ IG+LD+ GFE + E LCIN E +Q F+N HMF
Sbjct: 449 KAKRNYY-------------IGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFIL 495
Query: 357 SIESCRDENIHSDVEVDY-VDNVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKA 414
E + E I + +D+ +D CIDLI G+LS+L+ EC + +++ K+
Sbjct: 496 EQEEYKKEGIAWEF-IDFGMDLQMCIDLIEK-PMGILSILEEECMFPKADDKSFQDKLYQ 553
Query: 415 QHRHNPRLFDP--KPVDARC----FTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVF--H 466
H R+F KP F + H+AG V Y + +LE NKD + +++V++
Sbjct: 554 NHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGAS 613
Query: 467 KQTCIFGFATHLFGS-ELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTR 525
K+ + LF + E A + + +F+ H + LN
Sbjct: 614 KEPLV----AELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLN--------------- 654
Query: 526 LDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMR 585
L+++L PHFVRC+ N + G D V+ Q++ VLE + + G+P R+
Sbjct: 655 --KLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLI 712
Query: 586 FKAFNARYRLLAPFCKLRRTED--RLTEDCLLILQCVEEEHMKSPLLTQSEVSTSWVIGK 643
+ F RY +LAP + D ++E L LQ E+ +G
Sbjct: 713 YSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYR---------------LGT 757
Query: 644 RHIFLSEGIRQQLEMLRSDTRHRAAVLIQAVWRGTYARKRWPLLR 688
+F G+ LE +R + + + QA RG RK + L+
Sbjct: 758 TKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQ 802
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 135/585 (23%), Positives = 227/585 (38%), Gaps = 108/585 (18%)
Query: 120 SYLQSGDTRQDDVEDAARFQAWKACLGVLGIPFMDXXXX---XXXXXXXGNVQFVDKSSS 176
S++ G D+++D F+ +LG + G ++F +
Sbjct: 306 SFINQGCLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPRE 365
Query: 177 SGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQLVKSLCDANMSNMT 236
+ +G + VA L G+ + L + + ++V + N +
Sbjct: 366 E-------QAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNS 418
Query: 237 RDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQADVASQHASTVGTAGS 296
LAK+LY R +VRR N T +
Sbjct: 419 VGALAKSLYDRMFNWLVRRVNK----------------------------------TLDT 444
Query: 297 KSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKS 356
K+ ++ IG+LD+ GFE + E LCIN E +Q F+N HMF
Sbjct: 445 KAKRNYY-------------IGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFIL 491
Query: 357 SIESCRDENIHSDVEVDY-VDNVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKA 414
E + E I + +D+ +D CIDLI G+LS+L+ EC + +++ K+
Sbjct: 492 EQEEYKKEGIAWEF-IDFGMDLQMCIDLIEK-PMGILSILEEECMFPKADDKSFQDKLYQ 549
Query: 415 QHRHNPRLFDP--KPVDARC----FTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVF--H 466
H R+F KP F + H+AG V Y + +LE NKD + +++V++
Sbjct: 550 NHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGAS 609
Query: 467 KQTCIFGFATHLFGS-ELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTR 525
K+ + LF + E A + + +F+ H + LN
Sbjct: 610 KEPLV----AELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLN--------------- 650
Query: 526 LDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMR 585
L+++L PHFVRC+ N + G D V+ Q++ VLE + + G+P R+
Sbjct: 651 --KLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLI 708
Query: 586 FKAFNARYRLLAPFCKLRRTED--RLTEDCLLILQCVEEEHMKSPLLTQSEVSTSWVIGK 643
+ F RY +LAP + D ++E L LQ E+ +G
Sbjct: 709 YSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYR---------------LGT 753
Query: 644 RHIFLSEGIRQQLEMLRSDTRHRAAVLIQAVWRGTYARKRWPLLR 688
+F G+ LE +R + + + QA RG RK + L+
Sbjct: 754 TKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQ 798
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 135/585 (23%), Positives = 227/585 (38%), Gaps = 108/585 (18%)
Query: 120 SYLQSGDTRQDDVEDAARFQAWKACLGVLGIPFMDXXXX---XXXXXXXGNVQFVDKSSS 176
S++ G D+++D F+ +LG + G ++F +
Sbjct: 305 SFINQGCLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPRE 364
Query: 177 SGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQLVKSLCDANMSNMT 236
+ +G + VA L G+ + L + + ++V + N +
Sbjct: 365 E-------QAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNS 417
Query: 237 RDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQADVASQHASTVGTAGS 296
LAK+LY R +VRR N T +
Sbjct: 418 VGALAKSLYDRMFNWLVRRVNK----------------------------------TLDT 443
Query: 297 KSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKS 356
K+ ++ IG+LD+ GFE + E LCIN E +Q F+N HMF
Sbjct: 444 KAKRNYY-------------IGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFIL 490
Query: 357 SIESCRDENIHSDVEVDY-VDNVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKA 414
E + E I + +D+ +D CIDLI G+LS+L+ EC + +++ K+
Sbjct: 491 EQEEYKKEGIAWEF-IDFGMDLQMCIDLIEK-PMGILSILEEECMFPKADDKSFQDKLYQ 548
Query: 415 QHRHNPRLFDP--KPVDARC----FTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVF--H 466
H R+F KP F + H+AG V Y + +LE NKD + +++V++
Sbjct: 549 NHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGAS 608
Query: 467 KQTCIFGFATHLFGS-ELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTR 525
K+ + LF + E A + + +F+ H + LN
Sbjct: 609 KEPLV----AELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLN--------------- 649
Query: 526 LDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMR 585
L+++L PHFVRC+ N + G D V+ Q++ VLE + + G+P R+
Sbjct: 650 --KLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLI 707
Query: 586 FKAFNARYRLLAPFCKLRRTED--RLTEDCLLILQCVEEEHMKSPLLTQSEVSTSWVIGK 643
+ F RY +LAP + D ++E L LQ E+ +G
Sbjct: 708 YSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYR---------------LGT 752
Query: 644 RHIFLSEGIRQQLEMLRSDTRHRAAVLIQAVWRGTYARKRWPLLR 688
+F G+ LE +R + + + QA RG RK + L+
Sbjct: 753 TKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQ 797
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 135/585 (23%), Positives = 227/585 (38%), Gaps = 108/585 (18%)
Query: 120 SYLQSGDTRQDDVEDAARFQAWKACLGVLGIPFMDXXXX---XXXXXXXGNVQFVDKSSS 176
S++ G D+++D F+ +LG + G ++F +
Sbjct: 310 SFINQGCLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPRE 369
Query: 177 SGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQLVKSLCDANMSNMT 236
+ +G + VA L G+ + L + + ++V + N +
Sbjct: 370 E-------QAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNS 422
Query: 237 RDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQADVASQHASTVGTAGS 296
LAK+LY R +VRR N T +
Sbjct: 423 VGALAKSLYDRMFNWLVRRVNK----------------------------------TLDT 448
Query: 297 KSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKS 356
K+ ++ IG+LD+ GFE + E LCIN E +Q F+N HMF
Sbjct: 449 KAKRNYY-------------IGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFIL 495
Query: 357 SIESCRDENIHSDVEVDY-VDNVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKA 414
E + E I + +D+ +D CIDLI G+LS+L+ EC + +++ K+
Sbjct: 496 EQEEYKKEGIAWEF-IDFGMDLQMCIDLIEK-PMGILSILEEECMFPKADDKSFQDKLYQ 553
Query: 415 QHRHNPRLFDP--KPVDARC----FTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVF--H 466
H R+F KP F + H+AG V Y + +LE NKD + +++V++
Sbjct: 554 NHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGAS 613
Query: 467 KQTCIFGFATHLFGS-ELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTR 525
K+ + LF + E A + + +F+ H + LN
Sbjct: 614 KEPLV----AELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLN--------------- 654
Query: 526 LDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMR 585
L+++L PHFVRC+ N + G D V+ Q++ VLE + + G+P R+
Sbjct: 655 --KLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLI 712
Query: 586 FKAFNARYRLLAPFCKLRRTED--RLTEDCLLILQCVEEEHMKSPLLTQSEVSTSWVIGK 643
+ F RY +LAP + D ++E L LQ E+ +G
Sbjct: 713 YSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYR---------------LGT 757
Query: 644 RHIFLSEGIRQQLEMLRSDTRHRAAVLIQAVWRGTYARKRWPLLR 688
+F G+ LE +R + + + QA RG RK + L+
Sbjct: 758 TKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQ 802
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 135/585 (23%), Positives = 227/585 (38%), Gaps = 108/585 (18%)
Query: 120 SYLQSGDTRQDDVEDAARFQAWKACLGVLGIPFMDXXXX---XXXXXXXGNVQFVDKSSS 176
S++ G D+++D F+ +LG + G ++F +
Sbjct: 310 SFINQGCLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPRE 369
Query: 177 SGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQLVKSLCDANMSNMT 236
+ +G + VA L G+ + L + + ++V + N +
Sbjct: 370 E-------QAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNS 422
Query: 237 RDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQADVASQHASTVGTAGS 296
LAK+LY R +VRR N T +
Sbjct: 423 VGALAKSLYDRMFNWLVRRVNK----------------------------------TLDT 448
Query: 297 KSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKS 356
K+ ++ IG+LD+ GFE + E LCIN E +Q F+N HMF
Sbjct: 449 KAKRNYY-------------IGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFIL 495
Query: 357 SIESCRDENIHSDVEVDY-VDNVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKA 414
E + E I + +D+ +D CIDLI G+LS+L+ EC + +++ K+
Sbjct: 496 EQEEYKKEGIAWEF-IDFGMDLQMCIDLIEK-PMGILSILEEECMFPKADDKSFQDKLYQ 553
Query: 415 QHRHNPRLFDP--KPVDARC----FTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVF--H 466
H R+F KP F + H+AG V Y + +LE NKD + +++V++
Sbjct: 554 NHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGAS 613
Query: 467 KQTCIFGFATHLFGS-ELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTR 525
K+ + LF + E A + + +F+ H + LN
Sbjct: 614 KEPLV----AELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLN--------------- 654
Query: 526 LDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMR 585
L+++L PHFVRC+ N + G D V+ Q++ VLE + + G+P R+
Sbjct: 655 --KLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLI 712
Query: 586 FKAFNARYRLLAPFCKLRRTED--RLTEDCLLILQCVEEEHMKSPLLTQSEVSTSWVIGK 643
+ F RY +LAP + D ++E L LQ E+ +G
Sbjct: 713 YSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYR---------------LGT 757
Query: 644 RHIFLSEGIRQQLEMLRSDTRHRAAVLIQAVWRGTYARKRWPLLR 688
+F G+ LE +R + + + QA RG RK + L+
Sbjct: 758 TKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQ 802
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 206/500 (41%), Gaps = 95/500 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D F+ + + ++G M
Sbjct: 296 LHLAGPESFNYLN----QSGCVDIKGVSDEEEFKITRQAMDIVGFSQEEQMSIFKIIAGI 351
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 352 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 403
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V++ N++
Sbjct: 404 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL---------------------- 441
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ + A +G +LD+ GFE K + E LCIN
Sbjct: 442 CSERKAYFIG--------------------------VLDISGFEIFKVNSFEQLCINYTN 475
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 476 EKLQQFFNHHMFKVEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 534
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 535 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 593
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF P S G ++
Sbjct: 594 QDLELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVA 631
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
Q + +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 632 AQ-YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRK 690
Query: 579 GYPHRMRFKAFNARYRLLAP 598
G+P+R+ + F RY LAP
Sbjct: 691 GFPNRIIYADFVKRYYDLAP 710
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 207/500 (41%), Gaps = 95/500 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D F+ + + ++G M
Sbjct: 296 LHLAGPESFNYLN----QSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQMSIFKIIAGI 351
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 352 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 403
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V++ N++
Sbjct: 404 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL---------------------- 441
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ + A +G +LD+ GFE K + E LCIN
Sbjct: 442 CSERKAYFIG--------------------------VLDISGFEIFKVNSFEQLCINYTN 475
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 476 EKLQQFFNHHMFKVEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 534
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 535 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 593
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF A +G +F T+
Sbjct: 594 QDLELCFKDSSD--NVVTKLFNDPNIA----SRAKKGANFL-----------------TV 630
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
+ +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 631 AAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEAIRITRK 690
Query: 579 GYPHRMRFKAFNARYRLLAP 598
G+P+R+ + F RY LAP
Sbjct: 691 GFPNRIIYADFVKRYYDLAP 710
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|B Chain B, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|C Chain C, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|D Chain D, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|E Chain E, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|F Chain F, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
Length = 791
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 172/349 (49%), Gaps = 26/349 (7%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-V 375
+GILD+ GFE + + E LCIN E +Q +N MF E + E I + +D+ +
Sbjct: 460 LGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNF-IDFGL 518
Query: 376 DNVPCIDLISSLRT--GLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPV-DAR 431
D PCI+LI G+L++LD EC + T +++ K+ + ++ + K + D
Sbjct: 519 DLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQEQGNHAKFQKSKQLKDKT 578
Query: 432 CFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKALYSLET 491
F I H+AG+V Y+ S +L N D + D++ S+ ++ + F L+ ++ + L+
Sbjct: 579 EFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSD--KFVADLW-KDVDRIVGLDQ 635
Query: 492 VPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKANSSET 551
+ + + S + T+ Q + +L L+ +L + P+FVRC+ N +
Sbjct: 636 MAKMTESSLPSASKTK----KGMFRTVGQLYKEQLTKLMTTLRNTNPNFVRCIIPNHEKR 691
Query: 552 SGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTEDRLTE 611
+GK D V+ Q+R VLE + + G+P+R+ F+ F RY +LA + D +
Sbjct: 692 AGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANAIPKGFMDG-KQ 750
Query: 612 DCLLILQCVEEEHMKSPLLTQSEVSTSWVIGKRHIFLSEGIRQQLEMLR 660
C+L+++ +E + P L + IG+ IF G+ LE R
Sbjct: 751 ACILMIKALELD----PNL--------YRIGQSKIFFRTGVLAHLEEER 787
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N-
Methylanthraniloyl) Nucleotide Bound To Dictyostelium
Discoideum Myosin Motor Domain
Length = 762
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 126/500 (25%), Positives = 207/500 (41%), Gaps = 95/500 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D F+ + + ++G M
Sbjct: 296 LHLAGPESFNYLN----QSGCVDIKGVSDEDEFKITRQAMDIVGFSQEEQMSIFKIIAGI 351
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 352 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 403
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V++ N++
Sbjct: 404 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL---------------------- 441
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ + A +G +LD+ GFE K + E LCIN
Sbjct: 442 CSERKAYFIG--------------------------VLDISGFEIFKVNSFEQLCINYTN 475
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 476 EKLQQFFNHHMFKVEQEKYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 534
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 535 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 593
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF A +G +F T+
Sbjct: 594 QDLELCFKDSSD--NVVTKLFNDPNIA----SRAKKGANFL-----------------TV 630
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
+ +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 631 AAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRK 690
Query: 579 GYPHRMRFKAFNARYRLLAP 598
G+P+R+ + F RY LAP
Sbjct: 691 GFPNRIIYADFVKRYYDLAP 710
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
Length = 1052
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 140/303 (46%), Gaps = 31/303 (10%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDYVD 376
IG+LD+ GFE + + E CIN C E +Q F+N + K E + E + + EV YVD
Sbjct: 452 IGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVN-EVHYVD 510
Query: 377 NVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPV------- 428
N CIDLI + G+L +LD E L + + + + V +H+ + RL P+
Sbjct: 511 NQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRN 570
Query: 429 --DARCFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKAL 486
D F I+HFAG V Y+T+ F+E N D + L S+ + F LF S
Sbjct: 571 IRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD--KFIRELFESSTNNN 628
Query: 487 YSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKA 546
+ +SF ++ F T+L+ LL L F+RC+K
Sbjct: 629 KDTKQKAGKLSF-----------------ISVGNKFKTQLNLLLDKLRSTGASFIRCIKP 671
Query: 547 NSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTE 606
N TS F+ ++ Q++ ++ ++LM GG+P R F Y+ P KL R +
Sbjct: 672 NLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMP-DKLARLD 730
Query: 607 DRL 609
RL
Sbjct: 731 PRL 733
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 58/147 (39%), Gaps = 16/147 (10%)
Query: 121 YLQSGDTRQ---DDVEDAARFQAWKACLGVLGIPFMDXXXXXXXXXXXGNVQFVDKSSSS 177
YL++G + DD D R +G+ +D GN+ F + S+S
Sbjct: 300 YLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTS 359
Query: 178 GNNGTVTEVGVNGEST--LNSVASLLGVPSASLFRGITTRTH-----NARGQLVKSLCDA 230
G + +ST L A LLG+ L +TTR A+G ++K
Sbjct: 360 GG------CNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKV 413
Query: 231 NMSNMTRDCLAKALYCRTVATIVRRAN 257
+N RD LAK +Y +V R N
Sbjct: 414 EQANNARDALAKTVYSHLFDHVVNRVN 440
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
Length = 814
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 140/303 (46%), Gaps = 31/303 (10%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDYVD 376
IG+LD+ GFE + + E CIN C E +Q F+N + K E + E + + EV YVD
Sbjct: 451 IGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVN-EVHYVD 509
Query: 377 NVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPV------- 428
N CIDLI + G+L +LD E L + + + + V +H+ + RL P+
Sbjct: 510 NQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRN 569
Query: 429 --DARCFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKAL 486
D F I+HFAG V Y+T+ F+E N D + L S+ + F LF S
Sbjct: 570 IRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD--KFIRELFESSTNNN 627
Query: 487 YSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKA 546
+ +SF ++ F T+L+ LL L F+RC+K
Sbjct: 628 KDTKQKAGKLSF-----------------ISVGNKFKTQLNLLLDKLRSTGASFIRCIKP 670
Query: 547 NSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTE 606
N TS F+ ++ Q++ ++ ++LM GG+P R F Y+ P KL R +
Sbjct: 671 NLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMP-DKLARLD 729
Query: 607 DRL 609
RL
Sbjct: 730 PRL 732
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 58/147 (39%), Gaps = 16/147 (10%)
Query: 121 YLQSGDTRQ---DDVEDAARFQAWKACLGVLGIPFMDXXXXXXXXXXXGNVQFVDKSSSS 177
YL++G + DD D R +G+ +D GN+ F + S+S
Sbjct: 299 YLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTS 358
Query: 178 GNNGTVTEVGVNGEST--LNSVASLLGVPSASLFRGITTRTH-----NARGQLVKSLCDA 230
G + +ST L A LLG+ L +TTR A+G ++K
Sbjct: 359 GG------CNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKV 412
Query: 231 NMSNMTRDCLAKALYCRTVATIVRRAN 257
+N RD LAK +Y +V R N
Sbjct: 413 EQANNARDALAKTVYSHLFDHVVNRVN 439
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
Length = 814
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 140/303 (46%), Gaps = 31/303 (10%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDYVD 376
IG+LD+ GFE + + E CIN C E +Q F+N + K E + E + + EV YVD
Sbjct: 451 IGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVN-EVHYVD 509
Query: 377 NVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPV------- 428
N CIDLI + G+L +LD E L + + + + V +H+ + RL P+
Sbjct: 510 NQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRN 569
Query: 429 --DARCFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKAL 486
D F I+HFAG V Y+T+ F+E N D + L S+ + F LF S
Sbjct: 570 IRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD--KFIRELFESSTNNN 627
Query: 487 YSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKA 546
+ +SF ++ F T+L+ LL L F+RC+K
Sbjct: 628 KDTKQKAGKLSF-----------------ISVGNKFKTQLNLLLDKLRSTGASFIRCIKP 670
Query: 547 NSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTE 606
N TS F+ ++ Q++ ++ ++LM GG+P R F Y+ P KL R +
Sbjct: 671 NLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMP-DKLARLD 729
Query: 607 DRL 609
RL
Sbjct: 730 PRL 732
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 16/147 (10%)
Query: 121 YLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXXXXXGNVQFVDKSSSS 177
YL++G + ++D F + +G+ +D GN+ F + S+S
Sbjct: 299 YLKAGSLKDPGLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTS 358
Query: 178 GNNGTVTEVGVNGEST--LNSVASLLGVPSASLFRGITTRTH-----NARGQLVKSLCDA 230
G + +ST L A LLG+ L +TTR A+G ++K
Sbjct: 359 GG------CNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKV 412
Query: 231 NMSNMTRDCLAKALYCRTVATIVRRAN 257
+N RD LAK +Y +V R N
Sbjct: 413 EQANNARDALAKTVYSHLFDHVVNRVN 439
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|2VB6|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 788
Score = 125 bits (315), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 140/303 (46%), Gaps = 31/303 (10%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDYVD 376
IG+LD+ GFE + + E CIN C E +Q F+N + K E + E + + EV YVD
Sbjct: 425 IGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVN-EVHYVD 483
Query: 377 NVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPV------- 428
N CIDLI + G+L +LD E L + + + + V +H+ + RL P+
Sbjct: 484 NQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRN 543
Query: 429 --DARCFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKAL 486
D F I+HFAG V Y+T+ F+E N D + L S+ + F LF S
Sbjct: 544 IRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD--KFIRELFESSTNNN 601
Query: 487 YSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKA 546
+ +SF ++ F T+L+ LL L F+RC+K
Sbjct: 602 KDTKQKAGKLSF-----------------ISVGNKFKTQLNLLLDKLRSTGASFIRCIKP 644
Query: 547 NSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTE 606
N TS F+ ++ Q++ ++ ++LM GG+P R F Y+ P KL R +
Sbjct: 645 NLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMP-DKLARLD 703
Query: 607 DRL 609
RL
Sbjct: 704 PRL 706
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 63/161 (39%), Gaps = 19/161 (11%)
Query: 108 KLHLESYTPLNLSYLQSG----DTRQDDVEDAARFQAWKACLGVLGIPFMDXXXXXXXXX 163
+LHL S P N YL G D DD D R +G+ +D
Sbjct: 261 RLHLSS--PDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVL 318
Query: 164 XXGNVQFVDKSSSSGNNGTVTEVGVNGEST--LNSVASLLGVPSASLFRGITTRTH---- 217
GN+ F + S+SG + +ST L A LLG+ L +TTR
Sbjct: 319 HLGNIDFEEAGSTSGG------CNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTA 372
Query: 218 -NARGQLVKSLCDANMSNMTRDCLAKALYCRTVATIVRRAN 257
A+G ++K +N RD LAK +Y +V R N
Sbjct: 373 GGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVN 413
>pdb|2X51|A Chain A, M6 Delta Insert1
Length = 789
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 140/303 (46%), Gaps = 31/303 (10%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDYVD 376
IG+LD+ GFE + + E CIN C E +Q F+N + K E + E + + EV YVD
Sbjct: 426 IGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVN-EVHYVD 484
Query: 377 NVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPV------- 428
N CIDLI + G+L +LD E L + + + + V +H+ + RL P+
Sbjct: 485 NQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRN 544
Query: 429 --DARCFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKAL 486
D F I+HFAG V Y+T+ F+E N D + L S+ + F LF S
Sbjct: 545 IRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD--KFIRELFESSTNNN 602
Query: 487 YSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKA 546
+ +SF ++ F T+L+ LL L F+RC+K
Sbjct: 603 KDTKQKAGKLSF-----------------ISVGNKFKTQLNLLLDKLRSTGASFIRCIKP 645
Query: 547 NSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTE 606
N TS F+ ++ Q++ ++ ++LM GG+P R F Y+ P KL R +
Sbjct: 646 NLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMP-DKLARLD 704
Query: 607 DRL 609
RL
Sbjct: 705 PRL 707
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 63/161 (39%), Gaps = 19/161 (11%)
Query: 108 KLHLESYTPLNLSYLQSG----DTRQDDVEDAARFQAWKACLGVLGIPFMDXXXXXXXXX 163
+LHL S P N YL G D DD D R +G+ +D
Sbjct: 262 RLHLSS--PDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVL 319
Query: 164 XXGNVQFVDKSSSSGNNGTVTEVGVNGEST--LNSVASLLGVPSASLFRGITTRTH---- 217
GN+ F + S+SG + +ST L A LLG+ L +TTR
Sbjct: 320 HLGNIDFEEAGSTSGG------CNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTA 373
Query: 218 -NARGQLVKSLCDANMSNMTRDCLAKALYCRTVATIVRRAN 257
A+G ++K +N RD LAK +Y +V R N
Sbjct: 374 GGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVN 414
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 788
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 140/303 (46%), Gaps = 31/303 (10%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDYVD 376
IG+LD+ GFE + + E CIN C E +Q F+N + K E + E + + EV YVD
Sbjct: 425 IGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVN-EVHYVD 483
Query: 377 NVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPV------- 428
N CIDLI + G+L +LD E L + + + + V +H+ + RL P+
Sbjct: 484 NQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRN 543
Query: 429 --DARCFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKAL 486
D F I+HFAG V Y+T+ F+E N D + L S+ + F LF S
Sbjct: 544 IRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD--KFIRELFESSTNNN 601
Query: 487 YSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKA 546
+ +SF ++ F T+L+ LL L F+RC+K
Sbjct: 602 KDTKQKAGKLSF-----------------ISVGNKFKTQLNLLLDKLRSTGASFIRCIKP 644
Query: 547 NSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTE 606
N TS F+ ++ Q++ ++ ++LM GG+P R F Y+ P KL R +
Sbjct: 645 NLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMP-DKLARLD 703
Query: 607 DRL 609
RL
Sbjct: 704 PRL 706
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 63/161 (39%), Gaps = 19/161 (11%)
Query: 108 KLHLESYTPLNLSYLQSG----DTRQDDVEDAARFQAWKACLGVLGIPFMDXXXXXXXXX 163
+LHL S P N YL G D DD D R +G+ +D
Sbjct: 261 RLHLSS--PDNFRYLNRGGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVL 318
Query: 164 XXGNVQFVDKSSSSGNNGTVTEVGVNGEST--LNSVASLLGVPSASLFRGITTRTH---- 217
GN+ F + S+SG + +ST L A LLG+ L +TTR
Sbjct: 319 HLGNIDFEEAGSTSGG------CNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTA 372
Query: 218 -NARGQLVKSLCDANMSNMTRDCLAKALYCRTVATIVRRAN 257
A+G ++K +N RD LAK +Y +V R N
Sbjct: 373 GGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVN 413
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
Length = 858
Score = 125 bits (314), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 140/303 (46%), Gaps = 31/303 (10%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDYVD 376
IG+LD+ GFE + + E CIN C E +Q F+N + K E + E + + EV YVD
Sbjct: 452 IGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVN-EVHYVD 510
Query: 377 NVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPV------- 428
N CIDLI + G+L +LD E L + + + + V +H+ + RL P+
Sbjct: 511 NQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRN 570
Query: 429 --DARCFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKAL 486
D F I+HFAG V Y+T+ F+E N D + L S+ + F LF S
Sbjct: 571 IRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD--KFIRELFESSTNNN 628
Query: 487 YSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKA 546
+ +SF ++ F T+L+ LL L F+RC+K
Sbjct: 629 KDTKQKAGKLSF-----------------ISVGNKFKTQLNLLLDKLRSTGASFIRCIKP 671
Query: 547 NSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTE 606
N TS F+ ++ Q++ ++ ++LM GG+P R F Y+ P KL R +
Sbjct: 672 NLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMP-DKLARLD 730
Query: 607 DRL 609
RL
Sbjct: 731 PRL 733
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 58/147 (39%), Gaps = 16/147 (10%)
Query: 121 YLQSGDTRQ---DDVEDAARFQAWKACLGVLGIPFMDXXXXXXXXXXXGNVQFVDKSSSS 177
YL++G + DD D R +G+ +D GN+ F + S+S
Sbjct: 300 YLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTS 359
Query: 178 GNNGTVTEVGVNGEST--LNSVASLLGVPSASLFRGITTRTH-----NARGQLVKSLCDA 230
G + +ST L A LLG+ L +TTR A+G ++K
Sbjct: 360 GG------CNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKV 413
Query: 231 NMSNMTRDCLAKALYCRTVATIVRRAN 257
+N RD LAK +Y +V R N
Sbjct: 414 EQANNARDALAKTVYSHLFDHVVNRVN 440
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
Length = 814
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 140/303 (46%), Gaps = 31/303 (10%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDYVD 376
IG+LD+ GFE + + E CIN C E +Q F+N + K E + E + + EV YVD
Sbjct: 451 IGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVN-EVHYVD 509
Query: 377 NVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPV------- 428
N CIDLI + G+L +LD E L + + + + V +H+ + RL P+
Sbjct: 510 NQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRN 569
Query: 429 --DARCFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKAL 486
D F I+HFAG V Y+T+ F+E N D + L S+ + F LF S
Sbjct: 570 IRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD--KFIRELFESSTNNN 627
Query: 487 YSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKA 546
+ +SF ++ F T+L+ LL L F+RC+K
Sbjct: 628 KDTKQKAGKLSF-----------------ISVGNKFKTQLNLLLDKLRSTGASFIRCIKP 670
Query: 547 NSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTE 606
N TS F+ ++ Q++ ++ ++LM GG+P R F Y+ P KL R +
Sbjct: 671 NLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMP-DKLARLD 729
Query: 607 DRL 609
RL
Sbjct: 730 PRL 732
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 58/147 (39%), Gaps = 16/147 (10%)
Query: 121 YLQSGDTRQ---DDVEDAARFQAWKACLGVLGIPFMDXXXXXXXXXXXGNVQFVDKSSSS 177
YL++G + DD D R +G+ +D GN+ F + S+S
Sbjct: 299 YLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTS 358
Query: 178 GNNGTVTEVGVNGEST--LNSVASLLGVPSASLFRGITTRTH-----NARGQLVKSLCDA 230
G + +ST L A LLG+ L +TTR A+G ++K
Sbjct: 359 GG------CNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKV 412
Query: 231 NMSNMTRDCLAKALYCRTVATIVRRAN 257
+N RD LAK +Y +V R N
Sbjct: 413 EQANNARDALAKTVYSHLFDHVVNRVN 439
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State
Length = 786
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 140/303 (46%), Gaps = 31/303 (10%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDYVD 376
IG+LD+ GFE + + E CIN C E +Q F+N + K E + E + + EV YVD
Sbjct: 449 IGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVN-EVHYVD 507
Query: 377 NVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPV------- 428
N CIDLI + G+L +LD E L + + + + V +H+ + RL P+
Sbjct: 508 NQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRN 567
Query: 429 --DARCFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKAL 486
D F I+HFAG V Y+T+ F+E N D + L S+ + F LF S
Sbjct: 568 IRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD--KFIRELFESSTNNN 625
Query: 487 YSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKA 546
+ +SF ++ F T+L+ LL L F+RC+K
Sbjct: 626 KDTKQKAGKLSF-----------------ISVGNKFKTQLNLLLDKLRSTGASFIRCIKP 668
Query: 547 NSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTE 606
N TS F+ ++ Q++ ++ ++LM GG+P R F Y+ P KL R +
Sbjct: 669 NLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMP-DKLARLD 727
Query: 607 DRL 609
RL
Sbjct: 728 PRL 730
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 58/147 (39%), Gaps = 16/147 (10%)
Query: 121 YLQSGDTRQ---DDVEDAARFQAWKACLGVLGIPFMDXXXXXXXXXXXGNVQFVDKSSSS 177
YL++G + DD D R +G+ +D GN+ F + S+S
Sbjct: 297 YLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTS 356
Query: 178 GNNGTVTEVGVNGEST--LNSVASLLGVPSASLFRGITTRTH-----NARGQLVKSLCDA 230
G + +ST L A LLG+ L +TTR A+G ++K
Sbjct: 357 GG------CNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKV 410
Query: 231 NMSNMTRDCLAKALYCRTVATIVRRAN 257
+N RD LAK +Y +V R N
Sbjct: 411 EQANNARDALAKTVYSHLFDHVVNRVN 437
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
pdb|4E7S|B Chain B, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
Length = 798
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 140/303 (46%), Gaps = 31/303 (10%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDYVD 376
IG+LD+ GFE + + E CIN C E +Q F+N + K E + E + + EV YVD
Sbjct: 461 IGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVN-EVHYVD 519
Query: 377 NVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPV------- 428
N CIDLI + G+L +LD E L + + + + V +H+ + RL P+
Sbjct: 520 NQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHEN 579
Query: 429 --DARCFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKAL 486
D F I+HFAG V Y+T+ F+E N D + L S+ + F LF S
Sbjct: 580 IRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD--KFIRELFESSTNNN 637
Query: 487 YSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKA 546
+ +SF ++ F T+L+ LL L F+RC+K
Sbjct: 638 KDTKQKAGKLSF-----------------ISVGNKFKTQLNLLLDKLRSTGASFIRCIKP 680
Query: 547 NSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTE 606
N TS F+ ++ Q++ ++ ++LM GG+P R F Y+ P KL R +
Sbjct: 681 NLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMP-DKLARLD 739
Query: 607 DRL 609
RL
Sbjct: 740 PRL 742
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 58/147 (39%), Gaps = 16/147 (10%)
Query: 121 YLQSGDTRQ---DDVEDAARFQAWKACLGVLGIPFMDXXXXXXXXXXXGNVQFVDKSSSS 177
YL++G + DD D R +G+ +D GN+ F + S+S
Sbjct: 309 YLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTS 368
Query: 178 GNNGTVTEVGVNGEST--LNSVASLLGVPSASLFRGITTRTH-----NARGQLVKSLCDA 230
G + +ST L A LLG+ L +TTR A+G ++K
Sbjct: 369 GG------CNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKV 422
Query: 231 NMSNMTRDCLAKALYCRTVATIVRRAN 257
+N RD LAK +Y +V R N
Sbjct: 423 EQANNARDALAKTVYSHLFDHVVNRVN 449
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 843
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 160/375 (42%), Gaps = 37/375 (9%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-V 375
IG+LD+ GFE + E LCIN E +Q F+N HMF E E I + +D+ +
Sbjct: 459 IGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQEEYXXEGIEWEF-IDFGM 517
Query: 376 DNVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFD-PKPVDARC- 432
D CI+LI G+ S+L+ EC + T ++ + +H F PKP +
Sbjct: 518 DLAACIELIEX-PMGIFSILEEECMFPKATDTSFXNXLYDEHLGKSNNFQKPKPAKGKAE 576
Query: 433 --FTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKALYSLE 490
F++ H+AG V Y+ S +LE N D + + ++ ++ + L L++
Sbjct: 577 AHFSLVHYAGTVDYNISGWLEXNXDPLNETVIGLYQXSSV----------XTLALLFA-- 624
Query: 491 TVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKANSSE 550
T + + VS L F L+ L+ +L PHFVRC+ N +
Sbjct: 625 TYGGEAEGGGGKKGGKKKGSSFQTVSAL---FRENLNXLMANLRSTHPHFVRCIIPNETX 681
Query: 551 TSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTEDRLT 610
T G + V+ Q+R VLE + + G+P R+ + F RYR+L +
Sbjct: 682 TPGAMEHELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYRVL--------NASAIP 733
Query: 611 EDCLLILQCVEEEHMKSPLLTQSEVS-TSWVIGKRHIFLSEGIRQQLEMLRSDTRHRAAV 669
E Q ++ + LL +V T + G +F G+ LE +R D
Sbjct: 734 EG-----QFMDSKKASEKLLGGGDVDHTQYAFGHTXVFFXAGLLGLLEEMRDDXLAEIIT 788
Query: 670 LIQAVWRGTYARKRW 684
QA RG R +
Sbjct: 789 ATQARCRGFLMRVEY 803
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|S Chain S, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 840
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 160/375 (42%), Gaps = 37/375 (9%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-V 375
IG+LD+ GFE + E LCIN E +Q F+N HMF E E I + +D+ +
Sbjct: 456 IGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQEEYXXEGIEWEF-IDFGM 514
Query: 376 DNVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFD-PKPVDARC- 432
D CI+LI G+ S+L+ EC + T ++ + +H F PKP +
Sbjct: 515 DLAACIELIEX-PMGIFSILEEECMFPKATDTSFXNXLYDEHLGKSNNFQKPKPAKGKAE 573
Query: 433 --FTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKALYSLE 490
F++ H+AG V Y+ S +LE N D + + ++ ++ + L L++
Sbjct: 574 AHFSLVHYAGTVDYNISGWLEXNXDPLNETVIGLYQXSSV----------XTLALLFA-- 621
Query: 491 TVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKANSSE 550
T + + VS L F L+ L+ +L PHFVRC+ N +
Sbjct: 622 TYGGEAEGGGGKKGGKKKGSSFQTVSAL---FRENLNXLMANLRSTHPHFVRCIIPNETX 678
Query: 551 TSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTEDRLT 610
T G + V+ Q+R VLE + + G+P R+ + F RYR+L +
Sbjct: 679 TPGAMEHELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYRVL--------NASAIP 730
Query: 611 EDCLLILQCVEEEHMKSPLLTQSEVS-TSWVIGKRHIFLSEGIRQQLEMLRSDTRHRAAV 669
E Q ++ + LL +V T + G +F G+ LE +R D
Sbjct: 731 EG-----QFMDSKKASEKLLGGGDVDHTQYAFGHTXVFFXAGLLGLLEEMRDDXLAEIIT 785
Query: 670 LIQAVWRGTYARKRW 684
QA RG R +
Sbjct: 786 ATQARCRGFLMRVEY 800
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4)
Length = 784
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 140/303 (46%), Gaps = 31/303 (10%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDYVD 376
IG+LD+ GFE + + E CIN C E +Q F+N + K E + E + + EV YVD
Sbjct: 448 IGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVN-EVHYVD 506
Query: 377 NVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPV------- 428
N CIDLI + G+L +LD E L + + + + V +H+ + RL P+
Sbjct: 507 NQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRN 566
Query: 429 --DARCFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKAL 486
D F I+HFAG V Y+T+ F+E N D + L S+ + F LF S
Sbjct: 567 IRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD--KFIRELFESSTNNN 624
Query: 487 YSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKA 546
+ +SF ++ F T+L+ LL L F+RC+K
Sbjct: 625 KDTKQKAGKLSF-----------------ISVGNKFKTQLNLLLDKLRSTGASFIRCIKP 667
Query: 547 NSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTE 606
N TS F+ ++ Q++ ++ ++LM GG+P R F Y+ P KL R +
Sbjct: 668 NLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMP-DKLARLD 726
Query: 607 DRL 609
RL
Sbjct: 727 PRL 729
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 58/147 (39%), Gaps = 16/147 (10%)
Query: 121 YLQSGDTRQ---DDVEDAARFQAWKACLGVLGIPFMDXXXXXXXXXXXGNVQFVDKSSSS 177
YL++G + DD D R +G+ +D GN+ F + S+S
Sbjct: 296 YLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTS 355
Query: 178 GNNGTVTEVGVNGEST--LNSVASLLGVPSASLFRGITTRTH-----NARGQLVKSLCDA 230
G + +ST L A LLG+ L +TTR A+G ++K
Sbjct: 356 GG------CNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKV 409
Query: 231 NMSNMTRDCLAKALYCRTVATIVRRAN 257
+N RD LAK +Y +V R N
Sbjct: 410 EQANNARDALAKTVYSHLFDHVVNRVN 436
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
pdb|4E7Z|B Chain B, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
Length = 798
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/303 (30%), Positives = 140/303 (46%), Gaps = 31/303 (10%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDYVD 376
IG+LD+ GFE + + E CIN C E +Q F+N + K E + E + + EV YVD
Sbjct: 461 IGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGVN-EVHYVD 519
Query: 377 NVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDPKPV------- 428
N CIDLI + G+L +LD E L + + + + V +H+ + RL P+
Sbjct: 520 NQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRN 579
Query: 429 --DARCFTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVFHKQTCIFGFATHLFGSELKAL 486
D F I+HFAG V Y+T+ F+E N D + L S+ + F LF S
Sbjct: 580 IRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRD--KFIRELFESSTNNN 637
Query: 487 YSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCVKA 546
+ +SF ++ F T+L+ LL L F+RC+K
Sbjct: 638 KDTKQKAGKLSF-----------------ISVGNKFKTQLNLLLDKLRSTGASFIRCIKP 680
Query: 547 NSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRRTE 606
N TS F+ ++ Q++ ++ ++LM GG+P R F Y+ P KL R +
Sbjct: 681 NLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMP-DKLARLD 739
Query: 607 DRL 609
RL
Sbjct: 740 PRL 742
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 58/147 (39%), Gaps = 16/147 (10%)
Query: 121 YLQSGDTRQ---DDVEDAARFQAWKACLGVLGIPFMDXXXXXXXXXXXGNVQFVDKSSSS 177
YL++G + DD D R +G+ +D GN+ F + S+S
Sbjct: 309 YLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTS 368
Query: 178 GNNGTVTEVGVNGEST--LNSVASLLGVPSASLFRGITTRTH-----NARGQLVKSLCDA 230
G + +ST L A LLG+ L +TTR A+G ++K
Sbjct: 369 GG------CNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKV 422
Query: 231 NMSNMTRDCLAKALYCRTVATIVRRAN 257
+N RD LAK +Y +V R N
Sbjct: 423 EQANNARDALAKTVYSHLFDHVVNRVN 449
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii
Length = 838
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 168/384 (43%), Gaps = 48/384 (12%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-V 375
IG+LD+ GFE + E LCIN E +Q F+N HMF E + E I + +D+ +
Sbjct: 458 IGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKKEGIQWEF-IDFGM 516
Query: 376 DNVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDP--KPVDARC 432
D CIDLI G+LS+L+ EC + +++ H R+F KP
Sbjct: 517 DLQMCIDLIEK-PMGILSILEEECMFPKADDKSFQDYSYQNHIGKNRMFTKPGKPTRPNQ 575
Query: 433 ----FTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVF--HKQTCIFGFATHLFGS--ELK 484
F + H+AG V Y + +L+ NKD + +++VS+ K+ + LF + E
Sbjct: 576 GHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSKEPLV----AELFRAPDEPA 631
Query: 485 ALYSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCV 544
+ + +F+ H + LN L+++L PHFVRC+
Sbjct: 632 GGAGGKKKKKSSAFQTISAVHRESLN-----------------KLMKNLYSTHPHFVRCI 674
Query: 545 KANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRR 604
N + G D V+ Q++ VLE + + G+P R+ + F RY +LAP +
Sbjct: 675 IPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQG 734
Query: 605 TEDRLTEDCLLILQCVEEEHMKSPLLTQSEVSTSWVIGKRHIFLSEGIRQQLEMLRSDTR 664
D T V E+ + + SE + +G +F G+ LE +R +
Sbjct: 735 FVDGKT---------VSEKILTGLQMDPSE----YRLGTTKVFFKAGVLGNLEEMRDERL 781
Query: 665 HRAAVLIQAVWRGTYARKRWPLLR 688
+ + QA RG RK + L+
Sbjct: 782 SKIISMFQAHIRGYLIRKAYKKLQ 805
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum
Motor Domain S456y Mutant In Complex With
Adp-Orthovanadate
Length = 692
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 197/483 (40%), Gaps = 95/483 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D+ F+ + + ++G M
Sbjct: 295 LHLAGPESFNYLN----QSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGI 350
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 351 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 402
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V++ N++
Sbjct: 403 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL---------------------- 440
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ A +G +LD++GFE K + E LCIN
Sbjct: 441 CQERKAYFIG--------------------------VLDIYGFEIFKVNSFEQLCINYTN 474
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 475 EKLQQFFNHHMFKLEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 533
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 534 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 592
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF P S G ++
Sbjct: 593 QDLELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVA 630
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
Q + +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 631 AQ-YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRK 689
Query: 579 GYP 581
G+P
Sbjct: 690 GFP 692
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 840
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 167/384 (43%), Gaps = 48/384 (12%)
Query: 317 IGILDMFGFEDPKPSQLEHLCINLCAETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-V 375
IG+LD+ GFE + E LCIN E +Q F+N HMF E + E I + +D+ +
Sbjct: 457 IGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQEEYKKEGIQWEF-IDFGM 515
Query: 376 DNVPCIDLISSLRTGLLSMLDVECSL-RGTAETYLGKVKAQHRHNPRLFDP--KPVDARC 432
D CIDLI G+LS+L+ EC + +++ H R+F KP
Sbjct: 516 DLQMCIDLIEK-PMGILSILEEECMFPKADDKSFQDYSYQNHIGKNRMFTKPGKPTRPNQ 574
Query: 433 ----FTIQHFAGRVLYDTSDFLETNKDVVPDDLVSVF--HKQTCIFGFATHLFGS--ELK 484
F + H+AG V Y + +L+ NKD + +++VS+ K+ + LF + E
Sbjct: 575 GHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSKEPLV----AELFRAPDEPA 630
Query: 485 ALYSLETVPRGISFRISPTSHSDLLNGDEPVSTLTQDFHTRLDNLLRSLVHARPHFVRCV 544
+ + +F+ H + LN L+ +L PHFVRC+
Sbjct: 631 GGAGGKKKKKSSAFQTISAVHRESLN-----------------KLMCNLRRTNPHFVRCI 673
Query: 545 KANSSETSGKFDRGTVMRQIRSLQVLETVNLMAGGYPHRMRFKAFNARYRLLAPFCKLRR 604
N + G D V+ Q++ VLE + + G+P R+ + F RY +LAP +
Sbjct: 674 IPNLEKDPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQG 733
Query: 605 TEDRLTEDCLLILQCVEEEHMKSPLLTQSEVSTSWVIGKRHIFLSEGIRQQLEMLRSDTR 664
D T V E+ + + SE + +G +F G+ LE +R +
Sbjct: 734 FVDGKT---------VSEKILTGLQMDPSE----YRLGTTKVFFKAGVLGNLEEMRDERL 780
Query: 665 HRAAVLIQAVWRGTYARKRWPLLR 688
+ + QA RG RK + L+
Sbjct: 781 SKIISMFQAHIRGYLIRKAYKKLQ 804
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentachlorocarbazole
Length = 695
Score = 116 bits (290), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 120/486 (24%), Positives = 198/486 (40%), Gaps = 95/486 (19%)
Query: 109 LHL---ESYTPLNLSYLQSGDTRQDDVEDAARFQAWKACLGVLGI---PFMDXXXXXXXX 162
LHL ES+ LN QSG V D+ F+ + + ++G M
Sbjct: 295 LHLAGPESFNYLN----QSGCVDIKGVSDSEEFKITRQAMDIVGFSQEEQMSIFKIIAGI 350
Query: 163 XXXGNVQFVDKSSSSGNNGTVTEVGVNGESTLNSVASLLGVPSASLFRGITTRTHNARGQ 222
GN++F +K + G + ++ LN+ +++ GV + L + + A
Sbjct: 351 LHLGNIKF-EKGAGEG-------AVLKDKTALNAASTVFGVNPSVLEKALMEPRILAGRD 402
Query: 223 LVKSLCDANMSNMTRDCLAKALYCRTVATIVRRANSLKRXXXXXXXXXXDSNESVHNQAD 282
LV + S+ +RD L KALY R +V + N++
Sbjct: 403 LVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVL---------------------- 440
Query: 283 VASQHASTVGTAGSKSSKSMAALNNAVRHATDGSIGILDMFGFEDPKPSQLEHLCINLCA 342
+ A +G +LD+ GFE K + E LCIN
Sbjct: 441 CQERKAYFIG--------------------------VLDISGFEIFKVNSFEQLCINYTN 474
Query: 343 ETMQHFYNTHMFKSSIESCRDENIHSDVEVDY-VDNVPCIDLISSLR-TGLLSMLDVECS 400
E +Q F+N HMFK E E I+ +D+ +D+ IDLI + G+L++LD +
Sbjct: 475 EKLQQFFNHHMFKLEQEEYLKEKINWTF-IDFGLDSQATIDLIDGRQPPGILALLDEQSV 533
Query: 401 L-RGTAETYLGKVKAQH-RHNPRLFDPKPVDARCFTIQHFAGRVLYDTSDFLETNKDVVP 458
T T + K+ + + N + +P+ F + H+AG+V+Y+ D+LE NKD +
Sbjct: 534 FPNATDNTLITKLHSHFSKKNAKYEEPR-FSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQ 592
Query: 459 DDLVSVFHKQTCIFGFATHLFGSELKALYSLETVPRGISFRISPTSHSDLLNGDEPVSTL 518
DL F + T LF P S G ++
Sbjct: 593 QDLELCFKDSSD--NVVTKLFN--------------------DPNIASRAKKGANFITVA 630
Query: 519 TQDFHTRLDNLLRSLVHARPHFVRCVKANSSETSGKFDRGTVMRQIRSLQVLETVNLMAG 578
Q + +L +L+ +L PHFVRC+ N+ + K + V+ Q+R VLE + +
Sbjct: 631 AQ-YKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNGVLEGIRITRK 689
Query: 579 GYPHRM 584
G+P+R+
Sbjct: 690 GFPNRI 695
>pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant
pdb|3L1C|B Chain B, Kinesin-14 Protein Ncd, T436s Mutant
Length = 383
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 288 ASTVGTAGSKSSKSMAALNNAVRHATD-----GSIGILDMFGFEDPKPS 331
AST G S S ++ L RHA GSI ++D+ G E PK S
Sbjct: 251 ASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSESPKTS 299
>pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster
Length = 420
Score = 29.6 bits (65), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 288 ASTVGTAGSKSSKSMAALNNAVRHATD-----GSIGILDMFGFEDPKPS 331
AST G S S ++ L RHA GSI ++D+ G E PK S
Sbjct: 262 ASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSESPKTS 310
>pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL
Structure Of The Kinesin Motor Protein, Ncd
pdb|1N6M|B Chain B, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL
Structure Of The Kinesin Motor Protein, Ncd
Length = 409
Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 288 ASTVGTAGSKSSKSMAALNNAVRHATD-----GSIGILDMFGFEDPKPS 331
AST G S S ++ L RHA GSI ++D+ G E PK S
Sbjct: 251 ASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSESPKTS 299
>pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule
Motor Protein Ncd Reveals Variable Dimer Conformations
pdb|1CZ7|B Chain B, The Crystal Structure Of A Minus-End Directed Microtubule
Motor Protein Ncd Reveals Variable Dimer Conformations
pdb|1CZ7|C Chain C, The Crystal Structure Of A Minus-End Directed Microtubule
Motor Protein Ncd Reveals Variable Dimer Conformations
pdb|1CZ7|D Chain D, The Crystal Structure Of A Minus-End Directed Microtubule
Motor Protein Ncd Reveals Variable Dimer Conformations
Length = 406
Score = 29.6 bits (65), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 288 ASTVGTAGSKSSKSMAALNNAVRHATD-----GSIGILDMFGFEDPKPS 331
AST G S S ++ L RHA GSI ++D+ G E PK S
Sbjct: 248 ASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSESPKTS 296
>pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d
pdb|3U06|B Chain B, Crystal Structure Of The Kinesin-14 Ncdg347d
Length = 412
Score = 29.6 bits (65), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 288 ASTVGTAGSKSSKSMAALNNAVRHATD-----GSIGILDMFGFEDPKPS 331
AST G S S ++ L RHA GSI ++D+ G E PK S
Sbjct: 254 ASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSESPKTS 302
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.133 0.400
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,577,288
Number of Sequences: 62578
Number of extensions: 898216
Number of successful extensions: 2114
Number of sequences better than 100.0: 65
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1852
Number of HSP's gapped (non-prelim): 164
length of query: 863
length of database: 14,973,337
effective HSP length: 107
effective length of query: 756
effective length of database: 8,277,491
effective search space: 6257783196
effective search space used: 6257783196
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)