BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy6224
         (82 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P19967|CYB5R_DROME Cytochrome b5-related protein OS=Drosophila melanogaster
           GN=Cyt-b5-r PE=2 SV=2
          Length = 436

 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 45/78 (57%), Positives = 58/78 (74%), Gaps = 1/78 (1%)

Query: 1   MMGWGSFLFAVIGVNAAHHHPDIFHQGDTPREDRDWGINQIDAVRSRPDER-NQFIVLTT 59
           M    SF F +IG+NAAHH P+I+H+GD  REDRDWG+ Q+D +  R D + +QF+VLT 
Sbjct: 311 MTSIASFSFCLIGLNAAHHDPEIYHEGDANREDRDWGLFQVDTIIDRGDLKWSQFLVLTH 370

Query: 60  FGEHTLHHLFPTIDHCFL 77
           FG+H LHHLFPT+DH  L
Sbjct: 371 FGDHVLHHLFPTLDHGLL 388


>sp|Q7MZ92|FADB_PHOLL Fatty acid oxidation complex subunit alpha OS=Photorhabdus
           luminescens subsp. laumondii (strain TT01) GN=fadB PE=3
           SV=1
          Length = 728

 Score = 30.0 bits (66), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)

Query: 3   GWG---SFLFAVIGVNAAHHHPDIFHQGDTPREDRDW 36
           GW    ++L  VIG++ AHH   +  QG   R  RD+
Sbjct: 532 GWPMGPAYLIDVIGLDTAHHSQSVMAQGFPDRMHRDY 568


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.328    0.143    0.491 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,559,838
Number of Sequences: 539616
Number of extensions: 1162831
Number of successful extensions: 3314
Number of sequences better than 100.0: 2
Number of HSP's better than 100.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 3312
Number of HSP's gapped (non-prelim): 2
length of query: 82
length of database: 191,569,459
effective HSP length: 53
effective length of query: 29
effective length of database: 162,969,811
effective search space: 4726124519
effective search space used: 4726124519
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)