BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy623
(69 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q29503|UB2R2_RABIT Ubiquitin-conjugating enzyme E2 R2 OS=Oryctolagus cuniculus
GN=UBE2R2 PE=2 SV=1
Length = 238
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 51/62 (82%)
Query: 1 MAQVPTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKV 60
MAQ +S+ +AL +E KSLQEEPVEGFR+ LV++ +L+ WEVAIFGPP+TLY+GGYFK
Sbjct: 1 MAQQQMTSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKA 60
Query: 61 CV 62
+
Sbjct: 61 HI 62
>sp|Q6ZWZ2|UB2R2_MOUSE Ubiquitin-conjugating enzyme E2 R2 OS=Mus musculus GN=Ube2r2 PE=2
SV=1
Length = 238
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 51/62 (82%)
Query: 1 MAQVPTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKV 60
MAQ +S+ +AL +E KSLQEEPVEGFR+ LV++ +L+ WEVAIFGPP+TLY+GGYFK
Sbjct: 1 MAQQQMTSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKA 60
Query: 61 CV 62
+
Sbjct: 61 HI 62
>sp|Q712K3|UB2R2_HUMAN Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens GN=UBE2R2 PE=1
SV=1
Length = 238
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/62 (62%), Positives = 51/62 (82%)
Query: 1 MAQVPTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKV 60
MAQ +S+ +AL +E KSLQEEPVEGFR+ LV++ +L+ WEVAIFGPP+TLY+GGYFK
Sbjct: 1 MAQQQMTSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKA 60
Query: 61 CV 62
+
Sbjct: 61 HI 62
>sp|Q8CFI2|UB2R1_MOUSE Ubiquitin-conjugating enzyme E2 R1 OS=Mus musculus GN=Cdc34 PE=1
SV=1
Length = 235
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 47/60 (78%)
Query: 1 MAQVPTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKV 60
MA+ S+ +AL +E K LQEEPVEGFRV LV++ +L+ WEVAIFGPP+T Y+GGYFK
Sbjct: 1 MARPLVPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKA 60
>sp|P49427|UB2R1_HUMAN Ubiquitin-conjugating enzyme E2 R1 OS=Homo sapiens GN=CDC34 PE=1
SV=2
Length = 236
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 47/60 (78%)
Query: 1 MAQVPTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKV 60
MA+ S+ +AL +E K LQEEPVEGFRV LV++ +L+ WEVAIFGPP+T Y+GGYFK
Sbjct: 1 MARPLVPSSQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKA 60
>sp|Q9Y818|UBC15_SCHPO Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc15 PE=3 SV=1
Length = 167
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%)
Query: 4 VPTSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
+P+S++ + L + K +Q+ P +GF V LV+D ++FEWEV I GP DTLY+GG+F +
Sbjct: 1 MPSSASEQLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATL 59
>sp|Q4R5Y8|UB2G1_MACFA Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis
GN=UBE2G1 PE=2 SV=1
Length = 170
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 13 LSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCVVWYK 66
L + L + PVEGF L++D++L+ WEV I GPPDTLY+GG FK + + K
Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPK 63
>sp|P62255|UB2G1_RAT Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1
PE=2 SV=3
Length = 170
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 13 LSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCVVWYK 66
L + L + PVEGF L++D++L+ WEV I GPPDTLY+GG FK + + K
Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPK 63
>sp|P62254|UB2G1_MOUSE Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2
SV=3
Length = 170
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 13 LSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCVVWYK 66
L + L + PVEGF L++D++L+ WEV I GPPDTLY+GG FK + + K
Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPK 63
>sp|P62253|UB2G1_HUMAN Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1
SV=3
Length = 170
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 13 LSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCVVWYK 66
L + L + PVEGF L++D++L+ WEV I GPPDTLY+GG FK + + K
Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPK 63
>sp|P25869|UBC_ASFM2 Ubiquitin-conjugating enzyme E2 OS=African swine fever virus
(isolate Tick/Malawi/Lil 20-1/1983) GN=UBC PE=2 SV=1
Length = 213
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 13 LSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCVVW 64
L EYK+L P E F++ VN+DNL EW+V + GPPDTLY+GG FK +V+
Sbjct: 6 LLAEYKNLIVNPSEHFKIS-VNEDNLTEWDVILKGPPDTLYEGGLFKAKIVF 56
>sp|P34477|UBC7_CAEEL Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis
elegans GN=ubc-7 PE=1 SV=1
Length = 164
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 13 LSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
L + ++ PV+GF LV+D+++++WEV + GPPDTLY+GG+FK +
Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAIL 57
>sp|Q42540|UBC7_ARATH Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7
PE=2 SV=1
Length = 166
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 22 EEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCVVW 64
+ PV+GF LV++ N+FEW V I GPPDTLY+GG+F + +
Sbjct: 18 KHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTF 60
>sp|Q42541|UBC13_ARATH Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana
GN=UBC13 PE=2 SV=1
Length = 166
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 29/37 (78%)
Query: 22 EEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYF 58
+ PV+GF LV++ N+FEW V I GPPDTLY+GG+F
Sbjct: 18 KHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFF 54
>sp|P42747|UBC14_ARATH Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis thaliana
GN=UBC14 PE=2 SV=1
Length = 167
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 22 EEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
++PV+GF LV++ N+F+W V+I GPPDTLY+GG+F +
Sbjct: 19 KKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIM 59
>sp|P27949|UBC_ASFB7 Ubiquitin-conjugating enzyme E2 OS=African swine fever virus
(strain Badajoz 1971 Vero-adapted) GN=UBC PE=2 SV=1
Length = 215
Score = 56.2 bits (134), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 11 RALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCVVW 64
R L EY+ L E P E F++ VN++N+ EW+V + GPPDTLY+GG FK V +
Sbjct: 4 RFLIAEYRHLIENPSENFKIS-VNENNITEWDVILRGPPDTLYEGGLFKAKVAF 56
>sp|P0C8G5|UBC_ASFWA Ubiquitin-conjugating enzyme E2 OS=African swine fever virus
(isolate Warthog/Namibia/Wart80/1980) GN=UBC PE=2 SV=1
Length = 221
Score = 55.8 bits (133), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 11 RALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCVVW 64
R L EY+ L E P E F++ VN++++ EW+V + GPPDTLY+GG FK V +
Sbjct: 4 RFLMAEYRHLIENPSENFKIS-VNENDMTEWDVILRGPPDTLYEGGLFKAKVAF 56
>sp|P0C8G4|UBC_ASFP4 Ubiquitin-conjugating enzyme E2 OS=African swine fever virus
(isolate Tick/South Africa/Pretoriuskop Pr4/1996)
GN=UBC PE=2 SV=1
Length = 217
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 11 RALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFK 59
R L EY+ L E P E F+V VN++N+ EW+V + GP DTLY+GG FK
Sbjct: 4 RFLMAEYRHLTENPSENFKVS-VNENNMTEWDVILKGPADTLYEGGLFK 51
>sp|P25868|UBC7_WHEAT Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum GN=UBC7
PE=2 SV=1
Length = 168
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 24 PVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
P GF++ V+D N+FEW+V I GPP+TLY GGYF +
Sbjct: 23 PSMGFQLGFVDDSNVFEWQVTIIGPPETLYDGGYFNAIM 61
>sp|P0C8G3|UBC_ASFK5 Ubiquitin-conjugating enzyme E2 OS=African swine fever virus
(isolate Pig/Kenya/KEN-50/1950) GN=UBC PE=2 SV=1
Length = 218
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 11 RALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCVVW 64
R L EY++L E P E F+V VN++NL EW+V + GP DT Y+GG FK + +
Sbjct: 4 RFLLTEYRNLTENPSEHFKVS-VNENNLTEWDVILKGPSDTFYEGGLFKAKITF 56
>sp|Q9UTN8|UBC14_SCHPO Ubiquitin-conjugating enzyme E2 14 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc14 PE=3 SV=1
Length = 155
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 13 LSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
L+ EY L+E P+ RV LV DDNLF W GP D++Y GG F +
Sbjct: 12 LTKEYSDLREHPIPDIRVNLV-DDNLFHWACTALGPSDSVYAGGKFHFSL 60
>sp|Q17QG5|UB2G2_BOVIN Ubiquitin-conjugating enzyme E2 G2 OS=Bos taurus GN=UBE2G2 PE=2
SV=1
Length = 165
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
+AL+ L EYK L P EG +N++N FEWE I GP DT ++ G F +
Sbjct: 2 AGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAIL 58
>sp|Q5RF84|UB2G2_PONAB Ubiquitin-conjugating enzyme E2 G2 OS=Pongo abelii GN=UBE2G2 PE=2
SV=1
Length = 165
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
+AL+ L EYK L P EG +N++N FEWE I GP DT ++ G F +
Sbjct: 2 AGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAIL 58
>sp|P60605|UB2G2_MOUSE Ubiquitin-conjugating enzyme E2 G2 OS=Mus musculus GN=Ube2g2 PE=1
SV=1
Length = 165
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
+AL+ L EYK L P EG +N++N FEWE I GP DT ++ G F +
Sbjct: 2 AGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAIL 58
>sp|P60604|UB2G2_HUMAN Ubiquitin-conjugating enzyme E2 G2 OS=Homo sapiens GN=UBE2G2 PE=1
SV=1
Length = 165
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%)
Query: 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
+AL+ L EYK L P EG +N++N FEWE I GP DT ++ G F +
Sbjct: 2 AGTALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAIL 58
>sp|D3ZDK2|UB2D1_RAT Ubiquitin-conjugating enzyme E2 D1 OS=Rattus norvegicus GN=Ube2d1
PE=1 SV=1
Length = 147
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 9 ALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
AL+ + E LQ +P V DD LF W+ I GPPD+ YQGG F + V
Sbjct: 2 ALKRIQKELSDLQRDPPAHCSAGPVGDD-LFHWQATIMGPPDSAYQGGVFFLTV 54
>sp|P61080|UB2D1_MOUSE Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2
SV=1
Length = 147
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 9 ALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
AL+ + E LQ +P V DD LF W+ I GPPD+ YQGG F + V
Sbjct: 2 ALKRIQKELSDLQRDPPAHCSAGPVGDD-LFHWQATIMGPPDSAYQGGVFFLTV 54
>sp|P51668|UB2D1_HUMAN Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1
SV=1
Length = 147
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 9 ALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
AL+ + E LQ +P V DD LF W+ I GPPD+ YQGG F + V
Sbjct: 2 ALKRIQKELSDLQRDPPAHCSAGPVGDD-LFHWQATIMGPPDSAYQGGVFFLTV 54
>sp|Q2TA10|UB2D1_BOVIN Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2
SV=1
Length = 147
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 9 ALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
AL+ + E LQ +P V DD LF W+ I GPPD+ YQGG F + V
Sbjct: 2 ALKRIQKELSDLQRDPPAHCSAGPVGDD-LFHWQATIMGPPDSAYQGGVFFLTV 54
>sp|Q6FQK7|UBC6_CANGA Ubiquitin-conjugating enzyme E2 6 OS=Candida glabrata (strain
ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=UBC6 PE=3 SV=1
Length = 246
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYF 58
T A + L+ EYK + E P F + N++N+ EW I GPPDT Y GG +
Sbjct: 3 TKQAQKRLTKEYKMMVENP-PPFIIARPNEENILEWHYVISGPPDTPYDGGQY 54
>sp|P25153|UBCD6_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=UbcD6 PE=2 SV=2
Length = 151
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
++ A R L ++K LQE+P G D+N+ W IFGP DT ++ G FK+ +
Sbjct: 2 STPARRRLMRDFKRLQEDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTI 57
>sp|P52478|UBC1_CAEEL Ubiquitin-conjugating enzyme E2 1 OS=Caenorhabditis elegans
GN=ubc-1 PE=1 SV=1
Length = 192
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
T+ + R L ++K LQE+P G +DN+ WE IFGP +T ++ G FK+ +
Sbjct: 2 TTPSRRRLMRDFKKLQEDPPAGVS-GAPTEDNILTWEAIIFGPQETPFEDGTFKLSL 57
>sp|P25867|UBCD1_DROME Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster
GN=eff PE=2 SV=1
Length = 147
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 9 ALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
AL+ ++ E + L +P V DD LF W+ I GPPD+ YQGG F + +
Sbjct: 2 ALKRINKELQDLGRDPPAQCSAGPVGDD-LFHWQATIMGPPDSPYQGGVFFLTI 54
>sp|P42746|UBC3_ARATH Ubiquitin-conjugating enzyme E2 3 OS=Arabidopsis thaliana GN=UBC3
PE=2 SV=1
Length = 150
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
T+ A + L ++K LQ++P G D+N+ W IFGP DT + GG FK+ +
Sbjct: 2 TTPAKKRLMWDFKRLQKDPPVGIS-GAPQDNNIMHWNALIFGPEDTPWDGGTFKLTL 57
>sp|O42646|UBC6_SCHPO Ubiquitin-conjugating enzyme E2 6 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ubc6 PE=2 SV=1
Length = 227
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYF 58
+ A + L EY +LQ+ PVE K + N+ EW I GPPDT Y+GG +
Sbjct: 3 SKGAYKRLMKEYLALQKNPVELVDAKPATE-NILEWHYIITGPPDTPYEGGQY 54
>sp|P42745|UBC2_ARATH Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana GN=UBC2
PE=2 SV=1
Length = 152
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
++ A + L ++K LQ++P G D+N+ W IFGP DT + GG FK+ +
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSL 57
>sp|P25865|UBC1_ARATH Ubiquitin-conjugating enzyme E2 1 OS=Arabidopsis thaliana GN=UBC1
PE=1 SV=1
Length = 152
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
++ A + L ++K LQ++P G D+N+ W IFGP DT + GG FK+ +
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSL 57
>sp|P25866|UBC2_WHEAT Ubiquitin-conjugating enzyme E2 2 OS=Triticum aestivum GN=UBC2
PE=1 SV=1
Length = 152
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
++ A + L ++K LQ++P G +D+N+ W IFGP DT + GG FK+ +
Sbjct: 2 STPARKRLMRDFKRLQQDPPAGIS-GAPHDNNITLWNAVIFGPDDTPWDGGTFKLTL 57
>sp|P35130|UBC2_MEDSA Ubiquitin-conjugating enzyme E2 2 OS=Medicago sativa GN=UBC2 PE=2
SV=1
Length = 152
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
++ A + L ++K LQ +P G D+N+ W IFGP DT + GG FK+ +
Sbjct: 2 STPARKRLMRDFKRLQHDPPAGIS-GAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSL 57
>sp|Q553F3|UBC2_DICDI Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum
GN=ubc2 PE=3 SV=2
Length = 151
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
+++A R L ++K LQ +P G + ++N+ W+ IFGP D++++G FK+ +
Sbjct: 2 STAARRRLMRDFKRLQSDPPAGISGAPL-ENNILMWQAVIFGPDDSIWEGATFKLSL 57
>sp|P23566|UBC2_SCHPO Ubiquitin-conjugating enzyme E2 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rhp6 PE=1 SV=3
Length = 151
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
+++A R L ++K +Q++P G V+D N+ W I GP DT ++ G FK+ +
Sbjct: 2 STTARRRLMRDFKRMQQDPPAGVSASPVSD-NVMLWNAVIIGPADTPFEDGTFKLVL 57
>sp|Q9C9Y7|UBC12_ARATH Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis
thaliana GN=UBC12 PE=2 SV=1
Length = 149
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 9 ALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
A + +S E + +Q P V ++++F W+ I GP D+ Y GG F V +
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSI 55
>sp|Q8LGF7|PEX4_ARATH Protein PEROXIN-4 OS=Arabidopsis thaliana GN=PEX4 PE=1 SV=1
Length = 157
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 16 EYKSLQEEPVEGFRVKLVNDD-NLFEWEVAIFGPPDTLYQGGYFKV 60
EYK +Q E V ++L+ DD N+F+W I GP +T Y+GG F++
Sbjct: 11 EYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQL 56
>sp|O00102|UBC7_SCHPO Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ubc7 PE=2 SV=2
Length = 166
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 9 ALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
ALR L EYK L E +G N+D+ F W+ I GP T ++GG + +
Sbjct: 6 ALRRLMKEYKELTENGPDGITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATL 59
>sp|P33296|UBC6_YEAST Ubiquitin-conjugating enzyme E2 6 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBC6 PE=1 SV=1
Length = 250
Score = 42.4 bits (98), Expect = 9e-04, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYF 58
T A + L+ EYK + E P + + N+DN+ EW I GP DT Y+GG +
Sbjct: 3 TKQAHKRLTKEYKLMVENP-PPYILARPNEDNILEWHYIITGPADTPYKGGQY 54
>sp|Q4WLA7|UBC2_ASPFU Ubiquitin-conjugating enzyme E2 2 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=ubc2 PE=3 SV=1
Length = 151
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
++SA R L ++K +Q +P G V D N+ W I GP DT ++ G F++ +
Sbjct: 2 STSARRRLMRDFKRMQTDPPAGVSASPVAD-NVMTWNAVIIGPADTPFEDGTFRLVM 57
>sp|Q9Y2X8|UB2D4_HUMAN Ubiquitin-conjugating enzyme E2 D4 OS=Homo sapiens GN=UBE2D4 PE=1
SV=1
Length = 147
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 9 ALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
AL+ + E LQ +P V DD LF W+ I GP D+ YQGG F + +
Sbjct: 2 ALKRIQKELTDLQRDPPAQCSAGPVGDD-LFHWQATIMGPNDSPYQGGVFFLTI 54
>sp|Q96UP5|UBC2_EMENI Ubiquitin-conjugating enzyme E2 2 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=uvsJ PE=3 SV=1
Length = 151
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
++SA R L ++K +Q +P G V D N+ W I GP DT ++ G F++ +
Sbjct: 2 STSARRRLMRDFKRMQTDPPAGVSASPVAD-NVMTWNAVIIGPADTPFEDGTFRLVM 57
>sp|P35129|UBC2_CAEEL Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans
GN=let-70 PE=1 SV=1
Length = 147
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 9 ALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
AL+ + E + L +P V DD LF W+ I GPP++ YQGG F + +
Sbjct: 2 ALKRIQKELQDLGRDPPAQCSAGPVGDD-LFHWQATIMGPPESPYQGGVFFLTI 54
>sp|Q6C093|UBC2_YARLI Ubiquitin-conjugating enzyme E2 2 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=UBC2 PE=3 SV=1
Length = 151
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 6 TSSALRALSMEYKSLQEEPVEGFRVKLVNDDNLFEWEVAIFGPPDTLYQGGYFKVCV 62
+++A R L ++K +Q++P +G V D N+ W I GP +T ++ G F++ +
Sbjct: 2 STTARRRLMRDFKRMQQDPPQGVSASPVAD-NVLTWNAVIIGPAETPFEDGTFRMVL 57
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,447,432
Number of Sequences: 539616
Number of extensions: 875465
Number of successful extensions: 1564
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 139
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 1413
Number of HSP's gapped (non-prelim): 205
length of query: 69
length of database: 191,569,459
effective HSP length: 41
effective length of query: 28
effective length of database: 169,445,203
effective search space: 4744465684
effective search space used: 4744465684
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)