BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6230
(699 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VLM8|SYAC_DROME Alanine--tRNA ligase, cytoplasmic OS=Drosophila melanogaster
GN=Aats-ala PE=2 SV=1
Length = 966
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 206/371 (55%), Positives = 271/371 (73%), Gaps = 1/371 (0%)
Query: 329 RRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAE 388
RR M NH+ATH LNH L VLG + +QKGSLV P++LRFDF +K AMT +QV K E
Sbjct: 596 RRWLTMKNHSATHALNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKAAMTIEQVSKTEQL 655
Query: 389 VIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAG 448
+V P+YAK LA AKKI+GLR++FDE YPDPVRV+ G PV++LE P+S+AG
Sbjct: 656 TKEMVYKNVPIYAKESKLALAKKIRGLRSVFDEVYPDPVRVISFGVPVDELEQNPDSEAG 715
Query: 449 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVL 508
+TSVEFCGGTHL + H+ DF ISSEEAIAKGIRRIVAL+G EA KA+KK++ E E++
Sbjct: 716 EQTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALKKSEAFEQEIV 775
Query: 509 NVKNTLSNPNTA-DSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQ 567
+K T+ N + DSK+ K+I+++TE+I+ AT+PY KK+++RNLLK +KK+LD+ ER
Sbjct: 776 RLKATIDNDKSGKDSKSHVKEIVELTEQISHATIPYVKKDEMRNLLKGLKKTLDDKERAL 835
Query: 568 KAAHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISVD 627
+AA + V++R K+L E +VE L+A +NTKALDAALKQV++ P AAMF+SVD
Sbjct: 836 RAAVSVTVVERAKTLCEANPNATVLVEQLEAFNNTKALDAALKQVRSQLPDAAAMFLSVD 895
Query: 628 EAAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLS 687
+KKIFCLSSVPK AV GL A +WV++++ +GGKGGGK ESAQASG NYE ++
Sbjct: 896 ADSKKIFCLSSVPKSAVEKGLKANEWVQHVSATLGGKGGGKPESAQASGTNYEKVDEIVQ 955
Query: 688 KARDYASQQLS 698
A +A +LS
Sbjct: 956 LASKFAQSKLS 966
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 146/193 (75%), Gaps = 1/193 (0%)
Query: 88 IPGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFC 147
I GLR++FDE YPDPVRV+ G PV++LE P+S+AG +TSVEFCGGTHL + H+ DF
Sbjct: 679 IRGLRSVFDEVYPDPVRVISFGVPVDELEQNPDSEAGEQTSVEFCGGTHLRRSGHIMDFV 738
Query: 148 ISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTLSNPNTA-DSKALSKKII 206
ISSEEAIAKGIRRIVAL+G EA KA+KK++ E E++ +K T+ N + DSK+ K+I+
Sbjct: 739 ISSEEAIAKGIRRIVALTGPEALKALKKSEAFEQEIVRLKATIDNDKSGKDSKSHVKEIV 798
Query: 207 DITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKAAHASKVLDRVKSLVEERKADK 266
++TE+I+ AT+PY KK+++RNLLK +KK+LD+ ER +AA + V++R K+L E
Sbjct: 799 ELTEQISHATIPYVKKDEMRNLLKGLKKTLDDKERALRAAVSVTVVERAKTLCEANPNAT 858
Query: 267 FIVEILDAGSNTK 279
+VE L+A +NTK
Sbjct: 859 VLVEQLEAFNNTK 871
>sp|P21894|SYAC_BOMMO Alanine--tRNA ligase, cytoplasmic OS=Bombyx mori PE=1 SV=1
Length = 967
Score = 378 bits (970), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/373 (56%), Positives = 267/373 (71%), Gaps = 1/373 (0%)
Query: 327 SARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAE 386
+ RRR +M+NHT TH+LN+ LR VLG ++DQ+GSLV PDRLRFDFTNKG MT Q+K E
Sbjct: 595 TERRRLVMNNHTGTHVLNNVLRKVLGNDSDQRGSLVMPDRLRFDFTNKGPMTIKQIKDTE 654
Query: 387 AEVIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQ 446
E+ I+ K VYA SL++AKKI GLRAMFDE YPDPVRVV VG PVE L P++
Sbjct: 655 NEIKEIIAKNKTVYANYTSLSEAKKINGLRAMFDEHYPDPVRVVSVGVPVEDLIKNPDAP 714
Query: 447 AGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETE 506
G ETSVEFCGG+HL H+G++ I SEE IAKGIRRIVA++G EA KAI K V+E E
Sbjct: 715 TGFETSVEFCGGSHLHRTSHIGEYVIVSEEGIAKGIRRIVAVTGPEAIKAINKLSVLENE 774
Query: 507 VLNVKNTLSNPNTADS-KALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAER 565
V NV N + N + S K +SKKI+D+T EI++A + YWKK++LRN+LK +KK LD+ ER
Sbjct: 775 VNNVANFIKEQNESISHKEVSKKIVDLTNEISQAQISYWKKDELRNMLKNLKKQLDDKER 834
Query: 566 LQKAAHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFIS 625
+KA ++V ++ K L ERK K+IV L A NTKALD ALKQVK P+ AAMF S
Sbjct: 835 AEKAIIITQVTEKAKELCLERKESKYIVSELKAFGNTKALDGALKQVKQFCPNSAAMFFS 894
Query: 626 VDEAAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLV 685
VD+ A KI+CL++VPK V GL A +WV+ + DI+GGKGGGKAESAQASG N +
Sbjct: 895 VDKDADKIYCLAAVPKSDVEKGLLASEWVQSVVDIIGGKGGGKAESAQASGNNPNSLNEA 954
Query: 686 LSKARDYASQQLS 698
+ A +YA +L+
Sbjct: 955 IQIANEYAKSKLN 967
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 109/193 (56%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 88 IPGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFC 147
I GLRAMFDE YPDPVRVV VG PVE L P++ G ETSVEFCGG+HL H+G++
Sbjct: 680 INGLRAMFDEHYPDPVRVVSVGVPVEDLIKNPDAPTGFETSVEFCGGSHLHRTSHIGEYV 739
Query: 148 ISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTLSNPNTADS-KALSKKII 206
I SEE IAKGIRRIVA++G EA KAI K V+E EV NV N + N + S K +SKKI+
Sbjct: 740 IVSEEGIAKGIRRIVAVTGPEAIKAINKLSVLENEVNNVANFIKEQNESISHKEVSKKIV 799
Query: 207 DITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKAAHASKVLDRVKSLVEERKADK 266
D+T EI++A + YWKK++LRN+LK +KK LD+ ER +KA ++V ++ K L ERK K
Sbjct: 800 DLTNEISQAQISYWKKDELRNMLKNLKKQLDDKERAEKAIIITQVTEKAKELCLERKESK 859
Query: 267 FIVEILDAGSNTK 279
+IV L A NTK
Sbjct: 860 YIVSELKAFGNTK 872
>sp|Q5RC02|SYAC_PONAB Alanine--tRNA ligase, cytoplasmic OS=Pongo abelii GN=AARS PE=2 SV=1
Length = 968
Score = 362 bits (930), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 190/370 (51%), Positives = 251/370 (67%), Gaps = 2/370 (0%)
Query: 329 RRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAE 388
RRRPIMSNHTATHILN ALR VLG EADQKGSLVAPDRLRFDFT KGAM+ Q+KKAE
Sbjct: 597 RRRPIMSNHTATHILNFALRSVLG-EADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEI 655
Query: 389 VIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAG 448
+++ KPVY + CSLA AK I+GLRA+FDETYPDPVRVV +G PV +L +P AG
Sbjct: 656 ANEMIEAAKPVYTQDCSLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAG 715
Query: 449 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVL 508
TSVEFCGGTHL + H G F I +EEAIAKGIRRIVA++G EA KA++KA ++ + L
Sbjct: 716 SLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAGSLK-KPL 774
Query: 509 NVKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQK 568
+V TA +K + ++I D+ E +A A +P W+K++LR LK++KK +D+ +R K
Sbjct: 775 SVMEAKVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASK 834
Query: 569 AAHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISVDE 628
A +VL++ K L++ ++ +++G++ KAL+ ALK K +P AAM +VD
Sbjct: 835 ADVQKRVLEKTKQLIDSNPNQPLVILEMESGASAKALNEALKLFKMHSPQTAAMLFTVDN 894
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
A KI CL VP+ A + GL A +WV+ ++ +M GKGGGK SAQA+G N L
Sbjct: 895 EAGKITCLCQVPQNAANRGLKASEWVQQVSGLMDGKGGGKDVSAQATGKNVGCLQEALQL 954
Query: 689 ARDYASQQLS 698
A +A +L
Sbjct: 955 ATSFAQLRLG 964
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 129/192 (67%), Gaps = 1/192 (0%)
Query: 88 IPGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFC 147
I GLRA+FDETYPDPVRVV +G PV +L +P AG TSVEFCGGTHL + H G F
Sbjct: 679 IQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRNSSHAGAFV 738
Query: 148 ISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTLSNPNTADSKALSKKIID 207
I +EEAIAKGIRRIVA++G EA KA++KA ++ + L+V TA +K + ++I D
Sbjct: 739 IVTEEAIAKGIRRIVAVTGAEAQKALRKAGSLK-KPLSVMEAKVKAQTAPNKDVQREIAD 797
Query: 208 ITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKAAHASKVLDRVKSLVEERKADKF 267
+ E +A A +P W+K++LR LK++KK +D+ +R KA +VL++ K L++
Sbjct: 798 LGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQKRVLEKTKQLIDSNPNQPL 857
Query: 268 IVEILDAGSNTK 279
++ +++G++ K
Sbjct: 858 VILEMESGASAK 869
>sp|Q8CFX8|SYAC_MESAU Alanine--tRNA ligase, cytoplasmic OS=Mesocricetus auratus GN=Aars
PE=2 SV=1
Length = 968
Score = 358 bits (920), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 186/370 (50%), Positives = 250/370 (67%), Gaps = 2/370 (0%)
Query: 329 RRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAE 388
RRRP+MSNHTATHILN ALR VLG EADQKGSLVAPDRLRFDFT KGAM+ Q+K+AE
Sbjct: 597 RRRPVMSNHTATHILNFALRSVLG-EADQKGSLVAPDRLRFDFTAKGAMSTQQIKEAEEI 655
Query: 389 VIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAG 448
V +++ KPVY + C LA AK I+GLRA+FDETYPDPVRVV +G PV +L +P AG
Sbjct: 656 VNAMIEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAG 715
Query: 449 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVL 508
TSVEFCGGTHL + H G F I +EEAIAKGIRRIVA++G EA KA++KA+ + L
Sbjct: 716 SLTSVEFCGGTHLQNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLRRS-L 774
Query: 509 NVKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQK 568
++ TA +K + ++I D+ E +A A +P W+K++ R LK++KK +D+ +R K
Sbjct: 775 SIMEAKVKAQTAPNKDVQREIADLGEALATAVIPQWQKDEQRETLKSLKKVMDDLDRASK 834
Query: 569 AAHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISVDE 628
A +VL++ K L++ ++ +++G++ KAL+ ALK KT +P +AM +VD
Sbjct: 835 ADVQKRVLEKTKQLIDSNPNQPLVILEMESGASAKALNEALKLFKTHSPQTSAMLFTVDN 894
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
A KI CL VP+ A + GL A +WV+ ++ +M GKGGGK SAQA+G N L
Sbjct: 895 EAGKITCLCQVPQNAANRGLKASEWVQQVSGLMDGKGGGKDVSAQATGKNVGCLQEALQL 954
Query: 689 ARDYASQQLS 698
A +A +L
Sbjct: 955 ATSFAQLRLG 964
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 127/192 (66%), Gaps = 1/192 (0%)
Query: 88 IPGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFC 147
I GLRA+FDETYPDPVRVV +G PV +L +P AG TSVEFCGGTHL + H G F
Sbjct: 679 IQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLQNSSHAGAFV 738
Query: 148 ISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTLSNPNTADSKALSKKIID 207
I +EEAIAKGIRRIVA++G EA KA++KA+ + L++ TA +K + ++I D
Sbjct: 739 IVTEEAIAKGIRRIVAVTGAEAQKALRKAESLRRS-LSIMEAKVKAQTAPNKDVQREIAD 797
Query: 208 ITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKAAHASKVLDRVKSLVEERKADKF 267
+ E +A A +P W+K++ R LK++KK +D+ +R KA +VL++ K L++
Sbjct: 798 LGEALATAVIPQWQKDEQRETLKSLKKVMDDLDRASKADVQKRVLEKTKQLIDSNPNQPL 857
Query: 268 IVEILDAGSNTK 279
++ +++G++ K
Sbjct: 858 VILEMESGASAK 869
>sp|Q8BGQ7|SYAC_MOUSE Alanine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Aars PE=1 SV=1
Length = 968
Score = 358 bits (918), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 186/370 (50%), Positives = 251/370 (67%), Gaps = 2/370 (0%)
Query: 329 RRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAE 388
RRRP+MSNHTATHILN ALR VLG EADQKGSLVAPDRLRFDFT KGAM+ Q+KKAE
Sbjct: 597 RRRPVMSNHTATHILNFALRSVLG-EADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEI 655
Query: 389 VIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAG 448
V +++ KPVY + C LA AK I+GLRA+FDETYPDPVRVV +G PV +L +P AG
Sbjct: 656 VNGMIEAAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPCGPAG 715
Query: 449 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVL 508
TSVEFCGGTHL + H G F I +EEAIAKGIRRIVA++G EA KA++K++ ++ + L
Sbjct: 716 SLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKSETLK-KSL 774
Query: 509 NVKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQK 568
+ TA +K + ++I D+ E +A A +P W+K++ R LK++KK +D+ +R K
Sbjct: 775 SAMEAKVKAQTAPNKDVQREIADLGEALATAVIPQWQKDEQRETLKSLKKVMDDLDRASK 834
Query: 569 AAHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISVDE 628
A +VL++ K L++ ++ +++G++ KAL+ ALK KT +P +AM +VD
Sbjct: 835 ADVQKRVLEKTKQLIDSNPNQPLVILEMESGASAKALNEALKLFKTHSPQTSAMLFTVDN 894
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
A KI CL VP+ A + GL A +WV+ ++ +M GKGGGK SAQA+G N L
Sbjct: 895 EAGKITCLCQVPQNAANRGLKASEWVQQVSGLMDGKGGGKDMSAQATGKNVGCLQEALQL 954
Query: 689 ARDYASQQLS 698
A +A +L
Sbjct: 955 ATSFAQLRLG 964
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 128/192 (66%), Gaps = 1/192 (0%)
Query: 88 IPGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFC 147
I GLRA+FDETYPDPVRVV +G PV +L +P AG TSVEFCGGTHL + H G F
Sbjct: 679 IQGLRAVFDETYPDPVRVVSIGVPVSELLDDPCGPAGSLTSVEFCGGTHLRNSSHAGAFV 738
Query: 148 ISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTLSNPNTADSKALSKKIID 207
I +EEAIAKGIRRIVA++G EA KA++K++ ++ + L+ TA +K + ++I D
Sbjct: 739 IVTEEAIAKGIRRIVAVTGAEAQKALRKSETLK-KSLSAMEAKVKAQTAPNKDVQREIAD 797
Query: 208 ITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKAAHASKVLDRVKSLVEERKADKF 267
+ E +A A +P W+K++ R LK++KK +D+ +R KA +VL++ K L++
Sbjct: 798 LGEALATAVIPQWQKDEQRETLKSLKKVMDDLDRASKADVQKRVLEKTKQLIDSNPNQPL 857
Query: 268 IVEILDAGSNTK 279
++ +++G++ K
Sbjct: 858 VILEMESGASAK 869
>sp|P49588|SYAC_HUMAN Alanine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=AARS PE=1 SV=2
Length = 968
Score = 357 bits (915), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 186/370 (50%), Positives = 249/370 (67%), Gaps = 2/370 (0%)
Query: 329 RRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAE 388
RRRPIMSNHTATHILN ALR VLG EADQKGSLVAPDRLRFDFT KGAM+ Q+KKAE
Sbjct: 597 RRRPIMSNHTATHILNFALRSVLG-EADQKGSLVAPDRLRFDFTAKGAMSTQQIKKAEEI 655
Query: 389 VIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAG 448
+++ K VY + C LA AK I+GLRA+FDETYPDPVRVV +G PV +L +P AG
Sbjct: 656 ANEMIEAAKAVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAG 715
Query: 449 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVL 508
TSVEFCGGTHL + H G F I +EEAIAKGIRRIVA++G EA KA++KA+ ++ + L
Sbjct: 716 SLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKAESLK-KCL 774
Query: 509 NVKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQK 568
+V TA +K + ++I D+ E +A A +P W+K++LR LK++KK +D+ +R K
Sbjct: 775 SVMEAKVKAQTAPNKDVQREIADLGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASK 834
Query: 569 AAHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISVDE 628
A +VL++ K ++ ++ +++G++ KAL+ ALK K +P +AM +VD
Sbjct: 835 ADVQKRVLEKTKQFIDSNPNQPLVILEMESGASAKALNEALKLFKMHSPQTSAMLFTVDN 894
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
A KI CL VP+ A + GL A +WV+ ++ +M GKGGGK SAQA+G N L
Sbjct: 895 EAGKITCLCQVPQNAANRGLKASEWVQQVSGLMDGKGGGKDVSAQATGKNVGCLQEALQL 954
Query: 689 ARDYASQQLS 698
A +A +L
Sbjct: 955 ATSFAQLRLG 964
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 129/192 (67%), Gaps = 1/192 (0%)
Query: 88 IPGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFC 147
I GLRA+FDETYPDPVRVV +G PV +L +P AG TSVEFCGGTHL + H G F
Sbjct: 679 IQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRNSSHAGAFV 738
Query: 148 ISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTLSNPNTADSKALSKKIID 207
I +EEAIAKGIRRIVA++G EA KA++KA+ ++ + L+V TA +K + ++I D
Sbjct: 739 IVTEEAIAKGIRRIVAVTGAEAQKALRKAESLK-KCLSVMEAKVKAQTAPNKDVQREIAD 797
Query: 208 ITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKAAHASKVLDRVKSLVEERKADKF 267
+ E +A A +P W+K++LR LK++KK +D+ +R KA +VL++ K ++
Sbjct: 798 LGEALATAVIPQWQKDELRETLKSLKKVMDDLDRASKADVQKRVLEKTKQFIDSNPNQPL 857
Query: 268 IVEILDAGSNTK 279
++ +++G++ K
Sbjct: 858 VILEMESGASAK 869
>sp|P50475|SYAC_RAT Alanine--tRNA ligase, cytoplasmic OS=Rattus norvegicus GN=Aars PE=1
SV=3
Length = 968
Score = 354 bits (909), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 184/370 (49%), Positives = 250/370 (67%), Gaps = 2/370 (0%)
Query: 329 RRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAE 388
RRRP+MSNHTATHILN ALR VLG +ADQKGSLVAPDRLRFDFT KGAM+ +Q+KK E
Sbjct: 597 RRRPVMSNHTATHILNFALRSVLG-DADQKGSLVAPDRLRFDFTAKGAMSTEQIKKTEEI 655
Query: 389 VIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAG 448
V +++ KPVY C LA AK I+GLRA+FDETYPDPVRVV +G PV +L +P AG
Sbjct: 656 VNGMIEAAKPVYTLDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAG 715
Query: 449 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVL 508
TSVEFCGGTHL + H G F I +EEAIAKGIRRIVA++G EA KA++K++ ++ + L
Sbjct: 716 SLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQKALRKSETLK-KSL 774
Query: 509 NVKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQK 568
+ +A +K + K+I D+ E +A A +P W+K++ R LK++KK +D+ +R K
Sbjct: 775 SAMEVKVKAQSAPNKDVQKEIADLGEVLATAVIPQWQKDEQRETLKSLKKVMDDLDRASK 834
Query: 569 AAHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISVDE 628
A +VL++ K L++ ++ +++G++ KAL+ ALK KT +P +AM +VD
Sbjct: 835 ADVQKRVLEKTKQLIDSNPNQPLVILEMESGASAKALNEALKLFKTHSPQTSAMLFTVDN 894
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
A KI CL VP+ A + GL A +WV+ ++ +M GKGGGK SAQA+G N L
Sbjct: 895 EAGKITCLCQVPQNAANRGLKASEWVQQVSGLMDGKGGGKDMSAQATGKNVGCLQEALQL 954
Query: 689 ARDYASQQLS 698
A +A +L
Sbjct: 955 ATSFAQLRLG 964
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 128/192 (66%), Gaps = 1/192 (0%)
Query: 88 IPGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFC 147
I GLRA+FDETYPDPVRVV +G PV +L +P AG TSVEFCGGTHL + H G F
Sbjct: 679 IQGLRAVFDETYPDPVRVVSIGVPVSELLDDPSGPAGSLTSVEFCGGTHLRNSSHAGAFV 738
Query: 148 ISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTLSNPNTADSKALSKKIID 207
I +EEAIAKGIRRIVA++G EA KA++K++ ++ + L+ +A +K + K+I D
Sbjct: 739 IVTEEAIAKGIRRIVAVTGAEAQKALRKSETLK-KSLSAMEVKVKAQSAPNKDVQKEIAD 797
Query: 208 ITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKAAHASKVLDRVKSLVEERKADKF 267
+ E +A A +P W+K++ R LK++KK +D+ +R KA +VL++ K L++
Sbjct: 798 LGEVLATAVIPQWQKDEQRETLKSLKKVMDDLDRASKADVQKRVLEKTKQLIDSNPNQPL 857
Query: 268 IVEILDAGSNTK 279
++ +++G++ K
Sbjct: 858 VILEMESGASAK 869
>sp|O01541|SYAC_CAEEL Alanine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans
GN=aars-2 PE=2 SV=1
Length = 968
Score = 337 bits (865), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 185/371 (49%), Positives = 243/371 (65%), Gaps = 11/371 (2%)
Query: 329 RRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAE 388
R++ IM NHT TH+LN+ALR VL ++DQKGSLVAPDR+RFDFTNK MT QVKKAE
Sbjct: 598 RKQLIMKNHTGTHVLNYALRKVLA-DSDQKGSLVAPDRMRFDFTNKAGMTVQQVKKAEEY 656
Query: 389 VIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAG 448
+++ TK VYAK L +AKK+KGLRAMFDETYPDPVRVV VGTPVEQL P+++ G
Sbjct: 657 AQQLIDTKGQVYAKNSPLGEAKKVKGLRAMFDETYPDPVRVVAVGTPVEQLLQNPDAEEG 716
Query: 449 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVI----- 503
T+VEFCGGTHL H+G I+SEEAIAKGIRRIVAL+G EA +AI +A +
Sbjct: 717 QNTTVEFCGGTHLQNVSHIGRIVIASEEAIAKGIRRIVALTGPEAERAIARADRLTARLE 776
Query: 504 -ETEVLNVKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDE 562
E++ + K+ L N KAL KKI +I +E A LPYW+K+ +R K ++K+LD
Sbjct: 777 EESKHADKKDELL-ANKDKFKALQKKIQEIVDEANGAQLPYWRKDSIREKAKAIQKTLDG 835
Query: 563 AERLQKAAHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAM 622
+ Q+AA A KVL K L + +V + A +N+KA+D ALK +K + A M
Sbjct: 836 YTKAQQAAVAEKVLGEAKELAAVAEQPTVLVHVFAANANSKAIDNALKLLKDTK---AVM 892
Query: 623 FISVDEAAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENA 682
SV+E + K+ CL+ V K VS GL A +WV + ++GGKGGGK +AQ +G N +
Sbjct: 893 AFSVNEDSGKVLCLAKVDKSLVSNGLKANEWVNEVCTVLGGKGGGKDANAQLTGENVDKL 952
Query: 683 PLVLSKARDYA 693
+ A+ +A
Sbjct: 953 DAAVELAQKFA 963
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 139/233 (59%), Gaps = 22/233 (9%)
Query: 68 VAVKKTKKVD-----LTSTPDQVYL----------IPGLRAMFDETYPDPVRVVCVGTPV 112
+ V++ KK + L T QVY + GLRAMFDETYPDPVRVV VGTPV
Sbjct: 645 MTVQQVKKAEEYAQQLIDTKGQVYAKNSPLGEAKKVKGLRAMFDETYPDPVRVVAVGTPV 704
Query: 113 EQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKA 172
EQL P+++ G T+VEFCGGTHL H+G I+SEEAIAKGIRRIVAL+G EA +A
Sbjct: 705 EQLLQNPDAEEGQNTTVEFCGGTHLQNVSHIGRIVIASEEAIAKGIRRIVALTGPEAERA 764
Query: 173 IKKAQVI------ETEVLNVKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLR 226
I +A + E++ + K+ L N KAL KKI +I +E A LPYW+K+ +R
Sbjct: 765 IARADRLTARLEEESKHADKKDELL-ANKDKFKALQKKIQEIVDEANGAQLPYWRKDSIR 823
Query: 227 NLLKTMKKSLDEAERLQKAAHASKVLDRVKSLVEERKADKFIVEILDAGSNTK 279
K ++K+LD + Q+AA A KVL K L + +V + A +N+K
Sbjct: 824 EKAKAIQKTLDGYTKAQQAAVAEKVLGEAKELAAVAEQPTVLVHVFAANANSK 876
>sp|Q5A8K2|SYA_CANAL Alanine--tRNA ligase OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=ALA1 PE=1 SV=1
Length = 969
Score = 217 bits (552), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 132/351 (37%), Positives = 198/351 (56%), Gaps = 13/351 (3%)
Query: 329 RRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAE 388
RR PI +NHT THILN ALR VLG DQKGSLVAP++LRFDF++K A+TA +++K EA
Sbjct: 608 RRWPIRNNHTGTHILNFALREVLGDGVDQKGSLVAPEKLRFDFSHKQAVTAKELEKIEAI 667
Query: 389 VIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAG 448
+ ++ VY K SL AK+I GLRA+F ETYPDPVRVV +G V+ L ++P +
Sbjct: 668 SNKYIKNNDKVYYKDVSLTKAKEINGLRAVFGETYPDPVRVVSIGVSVDDLLADPTNTKW 727
Query: 449 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVL 508
E S+EFCGGTH+A + D I E IAKGIRRIVA++G++A K A E E
Sbjct: 728 HEISIEFCGGTHVAKTGDIKDLVIIEESGIAKGIRRIVAVTGHDAHHVQKVANEFEQE-- 785
Query: 509 NVKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQK 568
+ N S P ++ SK ++ + K ++ K+ L + KS+ + + ++
Sbjct: 786 -IDNASSLPFGVAKESKSK---ELGVALKKLSISVLDKQRLTEKFNKLDKSIKDNLKAKQ 841
Query: 569 AAHASKVLDRVKSLVEERK-ADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFIS-- 625
K LD V + + +++ A F+V + +N KA+ A+ +K + ++
Sbjct: 842 KEETKKTLDVVNNWLNDKENASSFLVAHVPITANAKAITEAINLIKKQDKTKSIYLLTGE 901
Query: 626 VDEAAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASG 676
D+ A + V EA++ G+ A + + +++ +GGK GGK Q G
Sbjct: 902 TDKVAHGCY----VSDEAIAKGINANELAKAVSENIGGKAGGKGNIVQGMG 948
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 104/193 (53%), Gaps = 7/193 (3%)
Query: 88 IPGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFC 147
I GLRA+F ETYPDPVRVV +G V+ L ++P + E S+EFCGGTH+A + D
Sbjct: 691 INGLRAVFGETYPDPVRVVSIGVSVDDLLADPTNTKWHEISIEFCGGTHVAKTGDIKDLV 750
Query: 148 ISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTLSNPNTADSKALSKKIID 207
I E IAKGIRRIVA++G++A K A E E + N S P ++ SK +
Sbjct: 751 IIEESGIAKGIRRIVAVTGHDAHHVQKVANEFEQE---IDNASSLPFGVAKESKSK---E 804
Query: 208 ITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKAAHASKVLDRVKSLVEERK-ADK 266
+ + K ++ K+ L + KS+ + + ++ K LD V + + +++ A
Sbjct: 805 LGVALKKLSISVLDKQRLTEKFNKLDKSIKDNLKAKQKEETKKTLDVVNNWLNDKENASS 864
Query: 267 FIVEILDAGSNTK 279
F+V + +N K
Sbjct: 865 FLVAHVPITANAK 877
>sp|O13914|SYA_SCHPO Alanine--tRNA ligase OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ala1 PE=1 SV=1
Length = 959
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/371 (33%), Positives = 197/371 (53%), Gaps = 13/371 (3%)
Query: 329 RRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAE 388
RR +M+NHT THILN ALR LG DQ+GSLV+ ++LRFDF+ K ++ D++ E
Sbjct: 598 RRWHLMNNHTVTHILNLALRNTLGDGIDQRGSLVSQEKLRFDFSYKSSIPIDKLLLVENY 657
Query: 389 VIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAG 448
++Q VY+K +L+ AK+I GLRA+F E YPDPVRVVC+G ++ L EP+
Sbjct: 658 CNNVIQDNLSVYSKEVALSKAKEINGLRAVFGEVYPDPVRVVCIGVDIDTLLQEPKKPDW 717
Query: 449 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVL 508
+ S+EFCGGTH + + DF I E IAKGIRRIVA++ EA + + A + +
Sbjct: 718 TKYSIEFCGGTHCDKSGEIKDFVILEENGIAKGIRRIVAVTSTEANRVSRLANEFDARIA 777
Query: 509 NVKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQK 568
++ +P A L K +D+++ + A +K ++ + + K + E +
Sbjct: 778 KLEKMPFSP--AKEAELKKISVDLSKLVVAAV----RKHAMKERIAKITKQVQEHVKAIN 831
Query: 569 AAHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISVDE 628
AA +V++ V +E F+V + +N KAL AL K + + ++ D+
Sbjct: 832 AAEQKEVVNVVTEYFKENPDMSFVVAKVPISANPKALSFALTYAKKNLKDKSIYLLASDD 891
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
CL V EA+ LT +W + + +GG+ GGK ++ Q G + PL +
Sbjct: 892 TKVAHACL--VSPEAMKK-LTPQEWSQKVCHSIGGRSGGKGDTCQGVG----DKPLSIDV 944
Query: 689 ARDYASQQLSG 699
A + A + G
Sbjct: 945 AVEEAIEFFQG 955
Score = 109 bits (272), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 142/307 (46%), Gaps = 43/307 (14%)
Query: 39 YLLSVPSMYLLLILYSLINL--NVVSWGTREVAVKKTKKVDLTSTPDQVYLIPGLRAMFD 96
Y S+P LLL+ N+ + +S ++EVA+ K K+++ GLRA+F
Sbjct: 642 YKSSIPIDKLLLVENYCNNVIQDNLSVYSKEVALSKAKEIN------------GLRAVFG 689
Query: 97 ETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAK 156
E YPDPVRVVC+G ++ L EP+ + S+EFCGGTH + + DF I E IAK
Sbjct: 690 EVYPDPVRVVCIGVDIDTLLQEPKKPDWTKYSIEFCGGTHCDKSGEIKDFVILEENGIAK 749
Query: 157 GIRRIVALSGNEATKAIKKAQVIETEVLNVKNTLSNPNTADSKALSKKIIDITEEIAKAT 216
GIRRIVA++ EA + + A + + ++ +P A L K +D+++ + A
Sbjct: 750 GIRRIVAVTSTEANRVSRLANEFDARIAKLEKMPFSP--AKEAELKKISVDLSKLVVAAV 807
Query: 217 LPYWKKEDLRNLLKTMKKSLDEAERLQKAAHASKVLDRVKSLVEERKADKFIVEILDAGS 276
+K ++ + + K + E + AA +V++ V +E F+V + +
Sbjct: 808 ----RKHAMKERIAKITKQVQEHVKAINAAEQKEVVNVVTEYFKENPDMSFVVAKVPISA 863
Query: 277 NTKIPRLRSFEFGLKRQT----SPYHVKSHGYSYIEPCV----------------EICAW 316
N P+ SF ++ S Y + S C+ ++C
Sbjct: 864 N---PKALSFALTYAKKNLKDKSIYLLASDDTKVAHACLVSPEAMKKLTPQEWSQKVCHS 920
Query: 317 TGGRSEG 323
GGRS G
Sbjct: 921 IGGRSGG 927
>sp|Q54Y20|SYAC_DICDI Alanine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum
GN=alaS PE=2 SV=1
Length = 946
Score = 199 bits (507), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 141/380 (37%), Positives = 214/380 (56%), Gaps = 10/380 (2%)
Query: 318 GGRSEGIPGSARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAM 377
G R E RR PIMSNHT+TH++N+AL+ +LG DQ+GS V R RFDF+ A+
Sbjct: 572 GDRVELTVDYTRRSPIMSNHTSTHMVNYALKNILGDGIDQRGSFVDAQRFRFDFSFGRAI 631
Query: 378 TADQVKKAEAEVIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVE 437
T D++ K + V + + V+AK LA AKKI GLRA+F E YPDPVRVV VG PVE
Sbjct: 632 TKDELIKIDQIVNDQIFKQLDVHAKEVGLASAKKINGLRAVFGEVYPDPVRVVSVGVPVE 691
Query: 438 QLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAI 497
QL P + S+EFCGGTHL+ F I+SEE + G+RRIVA++G+EA AI
Sbjct: 692 QLIENPTNPEWANYSIEFCGGTHLSNTKQAELFTITSEETLGAGVRRIVAVTGSEAASAI 751
Query: 498 KKAQVIETEVLNVKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMK 557
+ + +E +N L+K+I+ + + + T+ + +L LK ++
Sbjct: 752 ELNKELEVR-------FNNALKLSGSELAKEIVSLLDLLKVVTISASVRMNLVETLKEVQ 804
Query: 558 KSLDEAERLQKAAHASKVLDRVKSLVEE--RKADKFIVEILDAGSNTKALDAALKQVKTS 615
+ + Q+ A + ++ EE + K V++++ SNT + +K+++T
Sbjct: 805 ALQRKQVKEQETILAQQAQTYLEKTSEELAKSQPKVFVDLVNFNSNTPLITETIKKIQTK 864
Query: 616 APHMAAMFISVDEAAKKIFCLSSVPKEA-VSAGLTAIDWVRYLTDIMGGKGGGKAESAQA 674
+P A M IS DE K+ C+ VPK++ +S LTA WV +T+++GGKGGGK + AQ
Sbjct: 865 SPMTAIMLISPDEEKGKVTCIGIVPKDSEISKTLTANAWVVKVTEVLGGKGGGKVDVAQG 924
Query: 675 SGPNYENAPLVLSKARDYAS 694
G + + +R++A+
Sbjct: 925 VGSKLDKIDEAILVSREFAN 944
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 103/195 (52%), Gaps = 9/195 (4%)
Query: 88 IPGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFC 147
I GLRA+F E YPDPVRVV VG PVEQL P + S+EFCGGTHL+ F
Sbjct: 666 INGLRAVFGEVYPDPVRVVSVGVPVEQLIENPTNPEWANYSIEFCGGTHLSNTKQAELFT 725
Query: 148 ISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTLSNPNTADSKALSKKIID 207
I+SEE + G+RRIVA++G+EA AI+ + +E +N L+K+I+
Sbjct: 726 ITSEETLGAGVRRIVAVTGSEAASAIELNKELEVR-------FNNALKLSGSELAKEIVS 778
Query: 208 ITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKAAHASKVLDRVKSLVEE--RKAD 265
+ + + T+ + +L LK ++ + + Q+ A + ++ EE +
Sbjct: 779 LLDLLKVVTISASVRMNLVETLKEVQALQRKQVKEQETILAQQAQTYLEKTSEELAKSQP 838
Query: 266 KFIVEILDAGSNTKI 280
K V++++ SNT +
Sbjct: 839 KVFVDLVNFNSNTPL 853
>sp|P40825|SYA_YEAST Alanine--tRNA ligase, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=ALA1 PE=1 SV=3
Length = 983
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 170/291 (58%), Gaps = 14/291 (4%)
Query: 329 RRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAE 388
RR PI +NHT THILN AL+ LG + DQKGSLVAP++LRFDF++K A++ +++KK E
Sbjct: 617 RRFPIKNNHTGTHILNFALKETLGNDVDQKGSLVAPEKLRFDFSHKKAVSNEELKKVEDI 676
Query: 389 VIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAG 448
++ V+ K L AK I G+RA+F ETYPDPVRVV VG P+E+L + P ++
Sbjct: 677 CNEQIKENLQVFYKEIPLDLAKSIDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEW 736
Query: 449 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVL 508
+ S+EFCGGTH+ + F I E IAKGIRRIVA++G EA +A + A+ ++
Sbjct: 737 TKYSIEFCGGTHVNKTGDIKYFVILEESGIAKGIRRIVAVTGTEAFEAQRLAEQFAADL- 795
Query: 509 NVKNTLSNPNTADSKALS----KKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAE 564
+ AD S KK+ ++ ++ + ++ K +L+ ++K++ +
Sbjct: 796 ---------DAADKLPFSPIKEKKLKELGVKLGQLSISVITKNELKQKFNKIEKAVKDEV 846
Query: 565 RLQKAAHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTS 615
+ + + LD VK+ E + ++V+ +D N KA+ A+ +K++
Sbjct: 847 KSRAKKENKQTLDEVKTFFETNENAPYLVKFIDISPNAKAITEAINYMKSN 897
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 107/196 (54%), Gaps = 14/196 (7%)
Query: 88 IPGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFC 147
I G+RA+F ETYPDPVRVV VG P+E+L + P ++ + S+EFCGGTH+ + F
Sbjct: 700 IDGVRAVFGETYPDPVRVVSVGKPIEELLANPANEEWTKYSIEFCGGTHVNKTGDIKYFV 759
Query: 148 ISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTLSNPNTADSKALS----K 203
I E IAKGIRRIVA++G EA +A + A+ ++ + AD S K
Sbjct: 760 ILEESGIAKGIRRIVAVTGTEAFEAQRLAEQFAADL----------DAADKLPFSPIKEK 809
Query: 204 KIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKAAHASKVLDRVKSLVEERK 263
K+ ++ ++ + ++ K +L+ ++K++ + + + + LD VK+ E +
Sbjct: 810 KLKELGVKLGQLSISVITKNELKQKFNKIEKAVKDEVKSRAKKENKQTLDEVKTFFETNE 869
Query: 264 ADKFIVEILDAGSNTK 279
++V+ +D N K
Sbjct: 870 NAPYLVKFIDISPNAK 885
>sp|P36428|SYA_ARATH Alanine--tRNA ligase OS=Arabidopsis thaliana GN=ALATS PE=1 SV=3
Length = 1003
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/336 (34%), Positives = 185/336 (55%), Gaps = 12/336 (3%)
Query: 329 RRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAE 388
RR+ I NHT TH+LN+AL+ VLG DQKGS+V P++LRFDF++ + + +++ E+
Sbjct: 638 RRKLIAPNHTCTHMLNYALKEVLGDHIDQKGSIVLPEKLRFDFSHGKPVDPEDLRRIESI 697
Query: 389 VIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAG 448
V + ++ + V++K L++AK+IKGLRA+F E YPDPVRVV +G VE L ++PE+
Sbjct: 698 VNKQIKDELDVFSKEAVLSEAKRIKGLRAVFGEVYPDPVRVVSIGRKVEDLLADPENNEW 757
Query: 449 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVL 508
S EFCGGTH+ F + SEE IAKGIRR+ A++ A A+ A ++E EV
Sbjct: 758 SLLSSEFCGGTHITNTREAKAFALLSEEGIAKGIRRVTAVTTECAFDALNAASLLEREV- 816
Query: 509 NVKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAER--L 566
+ + A+ AL KK+ + + A +P KK D+R + +++ + +A++
Sbjct: 817 ------EDASRAEGSALEKKVSALKSRVDAAIIPAAKKADIRTKIASLQNEVRKAQKKIA 870
Query: 567 QKAAHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISV 626
++ S L + F + LD G + A+ A+ +V M+ M S
Sbjct: 871 EQNLKKSVKLATEAAESAASDGKTFCIIQLDVGLDAAAVREAVSKV-MEKKGMSIMVFST 929
Query: 627 DEAAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMG 662
DE+ K + VP++ S +D +LT +G
Sbjct: 930 DESTNKAVVCAGVPEK--SDQFKPLDVTEWLTTALG 963
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 88/154 (57%), Gaps = 7/154 (4%)
Query: 88 IPGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFC 147
I GLRA+F E YPDPVRVV +G VE L ++PE+ S EFCGGTH+ F
Sbjct: 721 IKGLRAVFGEVYPDPVRVVSIGRKVEDLLADPENNEWSLLSSEFCGGTHITNTREAKAFA 780
Query: 148 ISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTLSNPNTADSKALSKKIID 207
+ SEE IAKGIRR+ A++ A A+ A ++E EV + + A+ AL KK+
Sbjct: 781 LLSEEGIAKGIRRVTAVTTECAFDALNAASLLEREV-------EDASRAEGSALEKKVSA 833
Query: 208 ITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAER 241
+ + A +P KK D+R + +++ + +A++
Sbjct: 834 LKSRVDAAIIPAAKKADIRTKIASLQNEVRKAQK 867
>sp|D3ZX08|SYAM_RAT Alanine--tRNA ligase, mitochondrial OS=Rattus norvegicus GN=Aars2
PE=2 SV=1
Length = 985
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 136/398 (34%), Positives = 206/398 (51%), Gaps = 13/398 (3%)
Query: 303 GYSYIEPCVEICAWTGGRSEGIPGSARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 362
G+ E C G R + A R M HTATH+LN ALR LGP +Q+GS +
Sbjct: 598 GFILHEAMAPECLQVGDRVQLYVDKAWRMGCMVKHTATHLLNWALRQTLGPTTEQRGSHL 657
Query: 363 APDRLRFDFTNKGAMTADQVKKAEAEVIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDET 422
P+RLRFD + +T +Q++ E+ V V KPVY + LA +I GLR++ DE
Sbjct: 658 NPERLRFDVATQTPLTTEQLRTVESYVQEAVGQDKPVYMEEVPLAHTARIPGLRSL-DEV 716
Query: 423 YPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGI 482
YPDPVRVV VG PV Q + P SQA ++TSVE C GTHL VGD I + + KGI
Sbjct: 717 YPDPVRVVSVGVPVAQALA-PASQAALQTSVELCCGTHLLSTGAVGDLVIIGDRQLVKGI 775
Query: 483 RRIVALSGNEATKAIKKAQVI--ETEVLNVKNTLSNPNTADSKALSKKIIDITEEIAKAT 540
R++A++G +A +A + Q + E EV + + + + + ++ LSK I + E A
Sbjct: 776 TRLLAITGEQAQQAREVGQSLSQEVEVASERLSRGSRDLLEAHRLSKDIGRLIEFTESAV 835
Query: 541 LPYWKKEDLRNLLKTMKKSLDEAER-LQKAAHASKVLDRVKSLVEERKADKFIVEILDAG 599
+P W++++ + LK +++ + A R L+K S+ ++ + L++ IV+ + A
Sbjct: 836 IPQWQRQEQQTTLKMLQRRANTAIRKLEK----SQATEKSQELLKRHSEGPLIVDTVSAQ 891
Query: 600 SNTKALDAALKQVKTSAPHMAAMFISVDEAAKKIFCLSSVPKEAVSAGLTAIDWVRYLTD 659
S L ++Q+ AP M+ + +S + + C V + A TA W +
Sbjct: 892 S-LSVLVKVVRQLCKQAPSMSVLLLS-PQPTGSVLCACQVAQGATPT-FTAEAWALAVCS 948
Query: 660 IMGGKGGGKAESAQASGPNYENAPLVLSKARDYASQQL 697
MGGK G AQ +G + + L AR YA QL
Sbjct: 949 HMGGKAWGSPVIAQGTG-HTADLEAALRTARAYALNQL 985
Score = 92.8 bits (229), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 118/212 (55%), Gaps = 10/212 (4%)
Query: 69 AVKKTKKVDLTSTP-DQVYLIPGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMET 127
AV + K V + P IPGLR++ DE YPDPVRVV VG PV Q + P SQA ++T
Sbjct: 687 AVGQDKPVYMEEVPLAHTARIPGLRSL-DEVYPDPVRVVSVGVPVAQALA-PASQAALQT 744
Query: 128 SVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVI--ETEVLN 185
SVE C GTHL VGD I + + KGI R++A++G +A +A + Q + E EV +
Sbjct: 745 SVELCCGTHLLSTGAVGDLVIIGDRQLVKGITRLLAITGEQAQQAREVGQSLSQEVEVAS 804
Query: 186 VKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAER-LQK 244
+ + + + ++ LSK I + E A +P W++++ + LK +++ + A R L+K
Sbjct: 805 ERLSRGSRDLLEAHRLSKDIGRLIEFTESAVIPQWQRQEQQTTLKMLQRRANTAIRKLEK 864
Query: 245 AAHASKVLDRVKSLVEERKADKFIVEILDAGS 276
S+ ++ + L++ IV+ + A S
Sbjct: 865 ----SQATEKSQELLKRHSEGPLIVDTVSAQS 892
>sp|Q14CH7|SYAM_MOUSE Alanine--tRNA ligase, mitochondrial OS=Mus musculus GN=Aars2 PE=2
SV=1
Length = 980
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 195/372 (52%), Gaps = 11/372 (2%)
Query: 328 ARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEA 387
A R M HTATH+L+ ALR LGP +Q+GS + P+RLRFD + +T +Q++ E+
Sbjct: 618 AWRMGCMVKHTATHLLSWALRQTLGPTTEQRGSHLNPERLRFDVATQTLLTTEQLRTVES 677
Query: 388 EVIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQA 447
V +V KPV+ + LA +I GLR++ DE YPDPVRVV VG PV P SQA
Sbjct: 678 YVQEVVGQDKPVFMEEVPLAHTARIPGLRSL-DEVYPDPVRVVSVGVPVAHALG-PASQA 735
Query: 448 GMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEV 507
M TSVE C GTHL VGD I E + KGI R++A++G +A +A + Q + EV
Sbjct: 736 AMHTSVELCCGTHLLSTGAVGDLVIIGERQLVKGITRLLAITGEQAQQAREVGQSLSQEV 795
Query: 508 LNVKNTLSNP--NTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAER 565
LS + ++ LSK I +TE A +P W++++L+ LK +++ + A R
Sbjct: 796 EAASERLSQGSRDLPEAHRLSKDIGRLTEVAESAVIPQWQRQELQTTLKMLQRRANTAIR 855
Query: 566 LQKAAHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFIS 625
+ A+ ++ + L++ IV+ + A S L ++Q+ AP ++ + +S
Sbjct: 856 KLEKGQAT---EKSQELLKRHSEGPLIVDTVSAES-LSVLVKVVRQLCKQAPSISVLLLS 911
Query: 626 VDEAAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLV 685
+ + C V ++A TA W + MGGK G AQ +G + +
Sbjct: 912 -PQPTGSVLCACQVAQDATPT-FTAEAWALAVCSHMGGKAWGSRVVAQGTG-HTADLEAA 968
Query: 686 LSKARDYASQQL 697
L AR YA QL
Sbjct: 969 LGTARAYALSQL 980
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 105/191 (54%), Gaps = 7/191 (3%)
Query: 88 IPGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFC 147
IPGLR++ DE YPDPVRVV VG PV P SQA M TSVE C GTHL VGD
Sbjct: 702 IPGLRSL-DEVYPDPVRVVSVGVPVAHALG-PASQAAMHTSVELCCGTHLLSTGAVGDLV 759
Query: 148 ISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTLSNP--NTADSKALSKKI 205
I E + KGI R++A++G +A +A + Q + EV LS + ++ LSK I
Sbjct: 760 IIGERQLVKGITRLLAITGEQAQQAREVGQSLSQEVEAASERLSQGSRDLPEAHRLSKDI 819
Query: 206 IDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKAAHASKVLDRVKSLVEERKAD 265
+TE A +P W++++L+ LK +++ + A R + A+ ++ + L++
Sbjct: 820 GRLTEVAESAVIPQWQRQELQTTLKMLQRRANTAIRKLEKGQAT---EKSQELLKRHSEG 876
Query: 266 KFIVEILDAGS 276
IV+ + A S
Sbjct: 877 PLIVDTVSAES 887
>sp|Q5AQL1|SYA_EMENI Alanine--tRNA ligase OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=ala1 PE=3 SV=2
Length = 961
Score = 170 bits (431), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 107/327 (32%), Positives = 171/327 (52%), Gaps = 8/327 (2%)
Query: 329 RRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAE 388
RR PI +NHT THILN ALR VLG +QKGSLV+ ++LRFDF++K +T ++ K E
Sbjct: 596 RRWPIRNNHTGTHILNFALRGVLGDGIEQKGSLVSAEKLRFDFSHKSPVTDVELVKIEDL 655
Query: 389 VIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAG 448
+ ++ VY+K L+ A+ I G+RA+F ETYPDPVRVV VG ++++ E
Sbjct: 656 STQYIRRNCLVYSKEVPLSIARNIAGVRAVFGETYPDPVRVVSVGAELDEILKNVEDPRW 715
Query: 449 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVL 508
+ S+EFCGGTH+ + D I E IAKGIRRI+A++G +A + + A+ E +
Sbjct: 716 ADFSIEFCGGTHVQKTGDIKDLVILEESGIAKGIRRIIAVTGEDAHEVQRLAEEFEKRL- 774
Query: 509 NVKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQK 568
N L + +K + K I + E+ + ++ +K R + K + + ++ Q+
Sbjct: 775 ---NHLEAMPSGSAKEQNAKQIQV--ELNQLSISAVQKSRFRERFTQINKKIIDEQKAQQ 829
Query: 569 AAHASKVLDRVKSLVE--ERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISV 626
+ K ++ + S E +++ L +N KA+ L VKT ++
Sbjct: 830 KLESKKAVESITSYFAAPENANKSWLIAKLPISANAKAVSECLTYVKTKLADKMVYVLAS 889
Query: 627 DEAAKKIFCLSSVPKEAVSAGLTAIDW 653
++ VPK G +A +W
Sbjct: 890 SLEDGRVAHGCYVPKAISDQGASASEW 916
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 91/170 (53%), Gaps = 6/170 (3%)
Query: 88 IPGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFC 147
I G+RA+F ETYPDPVRVV VG ++++ E + S+EFCGGTH+ + D
Sbjct: 679 IAGVRAVFGETYPDPVRVVSVGAELDEILKNVEDPRWADFSIEFCGGTHVQKTGDIKDLV 738
Query: 148 ISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTLSNPNTADSKALSKKIID 207
I E IAKGIRRI+A++G +A + + A+ E + N L + +K + K I
Sbjct: 739 ILEESGIAKGIRRIIAVTGEDAHEVQRLAEEFEKRL----NHLEAMPSGSAKEQNAKQIQ 794
Query: 208 ITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKAAHASKVLDRVKS 257
+ E+ + ++ +K R + K + + ++ Q+ + K ++ + S
Sbjct: 795 V--ELNQLSISAVQKSRFRERFTQINKKIIDEQKAQQKLESKKAVESITS 842
>sp|Q5JTZ9|SYAM_HUMAN Alanine--tRNA ligase, mitochondrial OS=Homo sapiens GN=AARS2 PE=1
SV=1
Length = 985
Score = 170 bits (430), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 127/372 (34%), Positives = 196/372 (52%), Gaps = 11/372 (2%)
Query: 328 ARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEA 387
A R M+ HTATH+LN ALR LGP +Q+GS + P++LR D T + +T +Q++ E
Sbjct: 623 AWRLGCMAKHTATHLLNWALRQTLGPGTEQQGSHLNPEQLRLDVTTQTPLTPEQLRAVEN 682
Query: 388 EVIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQA 447
V V + VY + LA ++ GLR++ DE YPDPVRVV VG PV +P SQA
Sbjct: 683 TVQEAVGQDEAVYMEEVPLALTAQVPGLRSL-DEVYPDPVRVVSVGVPVAH-ALDPASQA 740
Query: 448 GMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEV 507
++TSVE C GTHL VGD I + ++KG R++A++G +A +A + Q + EV
Sbjct: 741 ALQTSVELCCGTHLLRTGAVGDLVIIGDRQLSKGTTRLLAVTGEQAQQARELGQSLAQEV 800
Query: 508 LNVKNTLS--NPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAER 565
LS + + A++ LSK I + E + A +P W++ +L +K +++ + A R
Sbjct: 801 KAATERLSLGSRDVAEALRLSKDIGRLIEAVETAVMPQWQRRELLATVKMLQRRANTAIR 860
Query: 566 LQKAAHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFIS 625
+ A+K + + L+E IV+ + A S L ++Q+ AP + + +S
Sbjct: 861 KLQMGQAAK---KTQELLERHSKGPLIVDTVSAES-LSVLVKVVRQLCEQAPSTSVLLLS 916
Query: 626 VDEAAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLV 685
+ K+ C V + A+ TA W + MGGK G AQ +G + +
Sbjct: 917 -PQPMGKVLCACQVAQGAMPT-FTAEAWALAVCSHMGGKAWGSRVVAQGTG-STTDLEAA 973
Query: 686 LSKARDYASQQL 697
LS A+ YA QL
Sbjct: 974 LSIAQTYALSQL 985
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 107/191 (56%), Gaps = 7/191 (3%)
Query: 88 IPGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFC 147
+PGLR++ DE YPDPVRVV VG PV +P SQA ++TSVE C GTHL VGD
Sbjct: 707 VPGLRSL-DEVYPDPVRVVSVGVPVAH-ALDPASQAALQTSVELCCGTHLLRTGAVGDLV 764
Query: 148 ISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTLS--NPNTADSKALSKKI 205
I + ++KG R++A++G +A +A + Q + EV LS + + A++ LSK I
Sbjct: 765 IIGDRQLSKGTTRLLAVTGEQAQQARELGQSLAQEVKAATERLSLGSRDVAEALRLSKDI 824
Query: 206 IDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKAAHASKVLDRVKSLVEERKAD 265
+ E + A +P W++ +L +K +++ + A R + A+K + + L+E
Sbjct: 825 GRLIEAVETAVMPQWQRRELLATVKMLQRRANTAIRKLQMGQAAK---KTQELLERHSKG 881
Query: 266 KFIVEILDAGS 276
IV+ + A S
Sbjct: 882 PLIVDTVSAES 892
>sp|Q7UFH9|SYA_RHOBA Alanine--tRNA ligase OS=Rhodopirellula baltica (strain SH1) GN=alaS
PE=3 SV=1
Length = 945
Score = 152 bits (385), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 120/414 (28%), Positives = 191/414 (46%), Gaps = 70/414 (16%)
Query: 330 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEV 389
R + H+ATHIL+HAL +G A+Q+GS V PDRLRFDFTN A+ + + K E +V
Sbjct: 557 RTALARAHSATHILHHALHTHVGRHAEQQGSKVEPDRLRFDFTNPKAIDDETLVKIEQDV 616
Query: 390 IRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGM 449
+ +V + SLADA++ G +F E YPDP R+V +GT
Sbjct: 617 LGMVGKGDEIRWDTVSLADARE-AGAMMLFGEKYPDPCRMVSMGT--------------- 660
Query: 450 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEV-- 507
S E CGGTHL VG F + EE+++ G RRI AL+G A + ++ Q + EV
Sbjct: 661 -FSRELCGGTHLTNTKQVGSFEVVVEESVSTGTRRIEALTGERAKEHREQTQALLNEVAG 719
Query: 508 -LN-------------------VKNTLSNPNTA--------DSKALSKKIIDITEEIAKA 539
LN +K LS+ A D+KA + DI++ A
Sbjct: 720 KLNCDASVAAAATVALIEEVRRLKKELSSGKAADYPAEFVFDAKAAKAETTDISDYNA-- 777
Query: 540 TLPYWKKEDLRNLLKTMKKSL-DEAERLQK-AAHASKVLDRVKSLVEERK---------- 587
+ +R L + + ++ D RL A SK+++++K + K
Sbjct: 778 -----VRAAVRGLTRRLNVAITDVLSRLDSLLADRSKLVEQLKQVTAGGKISADDLIADG 832
Query: 588 ---ADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISVDEAAKKIFCLSSVPKEAV 644
D ++ G+N + + Q++ + A+ ++ K+ + + ++ V
Sbjct: 833 TKVGDTLLIVAETPGANPNIMRGWIDQIRKKSDTPTAVLLA-SSMNDKVMLVGGLSRDLV 891
Query: 645 SAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSKARDYASQQLS 698
GL A DWV ++GG GGG+ + AQA G + P L +AR+ +++L
Sbjct: 892 DRGLKAGDWVGAAAKVVGGSGGGRPDMAQAGGKDASKLPEALQQARETMTEKLG 945
Score = 63.2 bits (152), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G +F E YPDP R+V +GT S E CGGTHL VG F +
Sbjct: 640 GAMMLFGEKYPDPCRMVSMGT----------------FSRELCGGTHLTNTKQVGSFEVV 683
Query: 150 SEEAIAKGIRRIVALSGNEATKAIKKAQVIETEV 183
EE+++ G RRI AL+G A + ++ Q + EV
Sbjct: 684 VEESVSTGTRRIEALTGERAKEHREQTQALLNEV 717
>sp|Q04QG6|SYA_LEPBJ Alanine--tRNA ligase OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain JB197) GN=alaS PE=3 SV=1
Length = 940
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 191/399 (47%), Gaps = 58/399 (14%)
Query: 327 SARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAE 386
+ARR + +H+ TH+LN ALR +LG QKGS+V+P+ LRFDF++ A+T+ +++K E
Sbjct: 571 AARRERLRFHHSGTHLLNGALRNLLGDHVLQKGSVVSPEYLRFDFSHPSALTSKEIRKIE 630
Query: 387 AEVIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQ 446
+ V ++ PV K + DAKKI G A F E Y D VRVV +G
Sbjct: 631 SWVNESIRKNYPVVTKELPIEDAKKI-GAVATFGEKYGDRVRVVQMG------------- 676
Query: 447 AGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKK--AQVIE 504
+ SVEFCGGTH++ +G F I E + G RRI + G + + A++ E
Sbjct: 677 ---DASVEFCGGTHVSHTGEIGYFFIKKESSPGAGNRRIEGVCGPAVIETFQNRFAELTE 733
Query: 505 T-EVLNVK----------NTLSNPNTADSKALSKKI-----------IDITEEIAKATLP 542
+ + LN+K L N N + +K+ D++EEIA
Sbjct: 734 SVQNLNLKIKSELDNEGSKILVNSNVPGPDEIREKLEKEGATAVTFFRDLSEEIASQI-- 791
Query: 543 YWKKEDLRNLLKTMKKSLDEAERLQKAAHASKVLDRVKSLVEERKADKFIVEILDAGSNT 602
+E LK MKKSL+ + A+ V+++V + + K + I D +
Sbjct: 792 ---EESTSAFLK-MKKSLESRDFENNAS----VIEKVFASSMDTGVGKIVSAIFDD-KDP 842
Query: 603 KALDAALKQVKTSAPHMAAMFIS--VDEAAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDI 660
+L +K ++ + S D A+ I C S + VS G+ D VR + ++
Sbjct: 843 NSLKGLSDNLKVREKNLLVILGSKNADNASVVITCSSQL----VSKGIHCGDLVRTVCEM 898
Query: 661 MGGKGGGKAESAQASGPNYENAPLVLSKARDYASQQLSG 699
+GGKGGGK + AQ G +N +S A A Q L+G
Sbjct: 899 LGGKGGGKPDMAQGGGKEKQNLESAISFAIQLAKQTLTG 937
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 86/212 (40%), Gaps = 59/212 (27%)
Query: 65 TREVAVKKTKKVDLTSTPDQVYLIPGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAG 124
T+E+ ++ KK+ G A F E Y D VRVV +G
Sbjct: 645 TKELPIEDAKKI-------------GAVATFGEKYGDRVRVVQMG--------------- 676
Query: 125 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKK--AQVIET- 181
+ SVEFCGGTH++ +G F I E + G RRI + G + + A++ E+
Sbjct: 677 -DASVEFCGGTHVSHTGEIGYFFIKKESSPGAGNRRIEGVCGPAVIETFQNRFAELTESV 735
Query: 182 EVLNVK----------NTLSNPNTADSKALSKKI-----------IDITEEIAKATLPYW 220
+ LN+K L N N + +K+ D++EEIA
Sbjct: 736 QNLNLKIKSELDNEGSKILVNSNVPGPDEIREKLEKEGATAVTFFRDLSEEIASQI---- 791
Query: 221 KKEDLRNLLKTMKKSLDEAERLQKAAHASKVL 252
+E LK MKKSL+ + A+ KV
Sbjct: 792 -EESTSAFLK-MKKSLESRDFENNASVIEKVF 821
>sp|Q054G6|SYA_LEPBL Alanine--tRNA ligase OS=Leptospira borgpetersenii serovar
Hardjo-bovis (strain L550) GN=alaS PE=3 SV=1
Length = 940
Score = 149 bits (377), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 125/399 (31%), Positives = 191/399 (47%), Gaps = 58/399 (14%)
Query: 327 SARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAE 386
+ARR + +H+ TH+LN ALR +LG QKGS+V+P+ LRFDF++ A+T+ +++K E
Sbjct: 571 AARRERLRFHHSGTHLLNGALRNLLGDHVLQKGSVVSPEYLRFDFSHPSALTSKEIRKIE 630
Query: 387 AEVIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQ 446
+ V ++ PV K + DAKKI G A F E Y D VRVV +G
Sbjct: 631 SWVNESIRKNYPVVTKELPIEDAKKI-GAVATFGEKYGDRVRVVQMG------------- 676
Query: 447 AGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKK--AQVIE 504
+ SVEFCGGTH++ +G F I E + G RRI + G + + A++ E
Sbjct: 677 ---DASVEFCGGTHVSHTGEIGYFFIKKESSPGAGNRRIEGVCGPAVIETFQNRFAELTE 733
Query: 505 T-EVLNVK----------NTLSNPNTADSKALSKKI-----------IDITEEIAKATLP 542
+ + LN+K L N N + +K+ D++EEIA
Sbjct: 734 SVQNLNLKIKSELDNEGSKILVNSNVPGPDEIREKLEKEGATAVTFFRDLSEEIASQI-- 791
Query: 543 YWKKEDLRNLLKTMKKSLDEAERLQKAAHASKVLDRVKSLVEERKADKFIVEILDAGSNT 602
+E LK MKKSL+ + A+ V+++V + + K + I D +
Sbjct: 792 ---EESTSAFLK-MKKSLESRDFENNAS----VIEKVFASSMDTGVGKIVSAIFDD-KDP 842
Query: 603 KALDAALKQVKTSAPHMAAMFIS--VDEAAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDI 660
+L +K ++ + S D A+ I C S + VS G+ D VR + ++
Sbjct: 843 NSLKGLSDNLKVREKNLLVILGSKNADNASVVITCSSQL----VSKGIHCGDLVRTVCEM 898
Query: 661 MGGKGGGKAESAQASGPNYENAPLVLSKARDYASQQLSG 699
+GGKGGGK + AQ G +N +S A A Q L+G
Sbjct: 899 LGGKGGGKPDMAQGGGKEKQNLESAISFAIQLAKQTLTG 937
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 86/212 (40%), Gaps = 59/212 (27%)
Query: 65 TREVAVKKTKKVDLTSTPDQVYLIPGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAG 124
T+E+ ++ KK+ G A F E Y D VRVV +G
Sbjct: 645 TKELPIEDAKKI-------------GAVATFGEKYGDRVRVVQMG--------------- 676
Query: 125 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKK--AQVIET- 181
+ SVEFCGGTH++ +G F I E + G RRI + G + + A++ E+
Sbjct: 677 -DASVEFCGGTHVSHTGEIGYFFIKKESSPGAGNRRIEGVCGPAVIETFQNRFAELTESV 735
Query: 182 EVLNVK----------NTLSNPNTADSKALSKKI-----------IDITEEIAKATLPYW 220
+ LN+K L N N + +K+ D++EEIA
Sbjct: 736 QNLNLKIKSELDNEGSKILVNSNVPGPDEIREKLEKEGATAVTFFRDLSEEIASQI---- 791
Query: 221 KKEDLRNLLKTMKKSLDEAERLQKAAHASKVL 252
+E LK MKKSL+ + A+ KV
Sbjct: 792 -EESTSAFLK-MKKSLESRDFENNASVIEKVF 821
>sp|A5WFW1|SYA_PSYWF Alanine--tRNA ligase OS=Psychrobacter sp. (strain PRwf-1) GN=alaS
PE=3 SV=1
Length = 903
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 114/372 (30%), Positives = 189/372 (50%), Gaps = 39/372 (10%)
Query: 327 SARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAE 386
SA R NH+ATH+L+ ALR VLG QKGSLV+ + LRFDF+ A++ + E
Sbjct: 571 SAIRSASARNHSATHLLHAALRKVLGDSVSQKGSLVSSEMLRFDFSYDNAVSQKDLATIE 630
Query: 387 AEVIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQ 446
V +Q + +L ++ DA KG A+F E Y + VRV+ +GT +E E
Sbjct: 631 RLVNEQIQANVETHIELMNIDDAMA-KGAAALFGEKYGETVRVLTMGT------TEIEDG 683
Query: 447 AGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETE 506
S+E CGG H+ +G F I+SE IA GIRRI AL+G A + I++A +++
Sbjct: 684 IQKPFSIELCGGLHVKRTGDIGLFKITSESGIAAGIRRIEALTGMGALRYIQQA---DSQ 740
Query: 507 VLNVKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERL 566
+ + N L KA ++ D + +A K+ +L ++ + + +
Sbjct: 741 LTALANQL--------KAKRPEVADRVQTMAD------KQRELEKQIERLNQKI------ 780
Query: 567 QKAAHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISV 626
+A A+ ++D V+++ ADK ++ AG + KA+ + +K+ + I V
Sbjct: 781 -ASAQAATLVDNVQTI-----ADKKVLIAQVAGIDGKAMRGLIDDIKSKLQD--TIIILV 832
Query: 627 DEAAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVL 686
E ++ +SV K +++ + A D +R+L D + GKGGGK + AQ P+ + V+
Sbjct: 833 GEKDGQLALAASVSK-SLTGDIKAGDIIRHLADELEGKGGGKPDYAQGGAPSSDKLTGVM 891
Query: 687 SKARDYASQQLS 698
++ + QLS
Sbjct: 892 QALPNWVASQLS 903
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 19/136 (13%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y + VRV+ +GT +E E S+E CGG H+ +G F I+
Sbjct: 657 GAAALFGEKYGETVRVLTMGT------TEIEDGIQKPFSIELCGGLHVKRTGDIGLFKIT 710
Query: 150 SEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTL--SNPNTAD--------SK 199
SE IA GIRRI AL+G A + I++A ++++ + N L P AD +
Sbjct: 711 SESGIAAGIRRIEALTGMGALRYIQQA---DSQLTALANQLKAKRPEVADRVQTMADKQR 767
Query: 200 ALSKKIIDITEEIAKA 215
L K+I + ++IA A
Sbjct: 768 ELEKQIERLNQKIASA 783
>sp|Q8CSA7|SYA_STAES Alanine--tRNA ligase OS=Staphylococcus epidermidis (strain ATCC
12228) GN=alaS PE=3 SV=1
Length = 876
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 176/365 (48%), Gaps = 52/365 (14%)
Query: 330 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEV 389
RR I NH+ATH+L+ AL+ VLG +Q GSLV P+RLRFDF++ G MT +++ E V
Sbjct: 558 RRLIQKNHSATHLLHAALKEVLGDHVNQAGSLVEPERLRFDFSHFGPMTQEEINLVERRV 617
Query: 390 IRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGM 449
+ V + S+ +AK I G A+F E Y D VRVV + P
Sbjct: 618 NEEIWRAIDVRIQEMSIEEAKSI-GAMALFGEKYGDIVRVVNM-APF------------- 662
Query: 450 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN 509
S+E CGG H+ +G F I SE G+RRI AL+G A +++ IET+ N
Sbjct: 663 --SIELCGGIHVNNTAEIGLFKIVSESGTGAGVRRIEALTGKGAFLHLEE---IETQFNN 717
Query: 510 VKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKA 569
+KN L + +K+ + EE + LLK +++ E L+
Sbjct: 718 IKNHLK---VKSDNQVVEKVKQLQEE-------------EKGLLKQLEQRNKEITSLKMG 761
Query: 570 AHASKV--LDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISVD 627
+V ++ +K L E VEI N KA+ + + K+ + + V
Sbjct: 762 NIEEQVELINNLKVLATE-------VEI----PNPKAIRSTMDDFKSKL--QDTIIVLVG 808
Query: 628 EAAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLS 687
+ K+ +++VPK +++ + A D ++ +T I+GGKGGG+ + AQ G E L
Sbjct: 809 QVDGKVSVIATVPK-SLTNQVKAGDLIKNMTPIIGGKGGGRPDMAQGGGTQPEKITEALR 867
Query: 688 KARDY 692
+DY
Sbjct: 868 FIKDY 872
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 19/101 (18%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRVV + P S+E CGG H+ +G F I
Sbjct: 641 GAMALFGEKYGDIVRVVNM-APF---------------SIELCGGIHVNNTAEIGLFKIV 684
Query: 150 SEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTL 190
SE G+RRI AL+G A +++ IET+ N+KN L
Sbjct: 685 SESGTGAGVRRIEALTGKGAFLHLEE---IETQFNNIKNHL 722
>sp|Q5HNT2|SYA_STAEQ Alanine--tRNA ligase OS=Staphylococcus epidermidis (strain ATCC
35984 / RP62A) GN=alaS PE=3 SV=1
Length = 876
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 176/365 (48%), Gaps = 52/365 (14%)
Query: 330 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEV 389
RR I NH+ATH+L+ AL+ VLG +Q GSLV P+RLRFDF++ G MT +++ E V
Sbjct: 558 RRLIQKNHSATHLLHAALKEVLGDHVNQAGSLVEPERLRFDFSHFGPMTQEEINLVERRV 617
Query: 390 IRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGM 449
+ V + S+ +AK I G A+F E Y D VRVV + P
Sbjct: 618 NEEIWRAIDVRIQEMSIEEAKSI-GAMALFGEKYGDIVRVVNM-APF------------- 662
Query: 450 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN 509
S+E CGG H+ +G F I SE G+RRI AL+G A +++ IET+ N
Sbjct: 663 --SIELCGGIHVNNTAEIGLFKIVSESGTGAGVRRIEALTGKGAFLHLEE---IETQFNN 717
Query: 510 VKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKA 569
+KN L + +K+ + EE + LLK +++ E L+
Sbjct: 718 IKNHLK---VKSDNQVVEKVKQLQEE-------------EKGLLKQLEQRNKEITSLKMG 761
Query: 570 AHASKV--LDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISVD 627
+V ++ +K L E VEI N KA+ + + K+ + + V
Sbjct: 762 NIEEQVELINNLKVLATE-------VEI----PNPKAIRSTMDDFKSKL--QDTIIVLVG 808
Query: 628 EAAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLS 687
+ K+ +++VPK +++ + A D ++ +T I+GGKGGG+ + AQ G E L
Sbjct: 809 QVDGKVSVIATVPK-SLTNQVKAGDLIKNMTPIIGGKGGGRPDMAQGGGTQPEKITEALR 867
Query: 688 KARDY 692
+DY
Sbjct: 868 FIKDY 872
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 49/101 (48%), Gaps = 19/101 (18%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRVV + P S+E CGG H+ +G F I
Sbjct: 641 GAMALFGEKYGDIVRVVNM-APF---------------SIELCGGIHVNNTAEIGLFKIV 684
Query: 150 SEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTL 190
SE G+RRI AL+G A +++ IET+ N+KN L
Sbjct: 685 SESGTGAGVRRIEALTGKGAFLHLEE---IETQFNNIKNHL 722
>sp|A1AZL6|SYA_PARDP Alanine--tRNA ligase OS=Paracoccus denitrificans (strain Pd 1222)
GN=alaS PE=3 SV=1
Length = 885
Score = 140 bits (354), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 120/210 (57%), Gaps = 5/210 (2%)
Query: 329 RRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAE 388
RR I +NH+ATH+L+ ALR LG Q+GSL APDRLRFDF++ AMT +++ + E E
Sbjct: 555 RRSAIRANHSATHLLHEALRRALGEHVAQRGSLNAPDRLRFDFSHAKAMTPEELAQVERE 614
Query: 389 VIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAG 448
V ++ PV ++ + DA+ + G +A+F E Y D VRVV +G +L + G
Sbjct: 615 VNDFIRQNSPVETRIMTPDDARAL-GAQALFGEKYGDEVRVVSMG----ELPGSGKGTGG 669
Query: 449 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVL 508
S+E CGGTH+A +G F ++SE A A GIRRI AL+G A +++ E+
Sbjct: 670 QTYSLELCGGTHVARTGDIGMFALTSETASAAGIRRIEALTGQAAMDELRRVDGELNEIA 729
Query: 509 NVKNTLSNPNTADSKALSKKIIDITEEIAK 538
+ + + +AL+ + + E+A+
Sbjct: 730 GIVKAQAGDVVSKVRALADERKALANEVAQ 759
Score = 73.6 bits (179), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 5/134 (3%)
Query: 81 TPDQVYLIPGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMA 140
TPD + G +A+F E Y D VRVV +G +L + G S+E CGGTH+A
Sbjct: 631 TPDDARAL-GAQALFGEKYGDEVRVVSMG----ELPGSGKGTGGQTYSLELCGGTHVART 685
Query: 141 HHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTLSNPNTADSKA 200
+G F ++SE A A GIRRI AL+G A +++ E+ + + + +A
Sbjct: 686 GDIGMFALTSETASAAGIRRIEALTGQAAMDELRRVDGELNEIAGIVKAQAGDVVSKVRA 745
Query: 201 LSKKIIDITEEIAK 214
L+ + + E+A+
Sbjct: 746 LADERKALANEVAQ 759
>sp|P67011|SYA_STAAN Alanine--tRNA ligase OS=Staphylococcus aureus (strain N315) GN=alaS
PE=1 SV=1
Length = 876
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 176/364 (48%), Gaps = 50/364 (13%)
Query: 330 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEV 389
RR I NH+ATH+L+ AL+ VLG +Q GSLV DRLRFDF++ G MT D++ + E V
Sbjct: 558 RRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLV 617
Query: 390 IRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGM 449
+ V + +A AK++ G A+F E Y D VRVV + P
Sbjct: 618 NEEIWKGIDVNIQEMDIASAKEM-GAMALFGEKYGDVVRVVNMA-PF------------- 662
Query: 450 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN 509
S+E CGG H+ +G F I SE G+RRI AL+G A L
Sbjct: 663 --SIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAA-------------FLY 707
Query: 510 VKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKA 569
+++ NT S+ K + E++ + +++ + LLK +++ E L+
Sbjct: 708 LEDIQEKFNTMKSQMKVKSDDQVVEKLTQL------QDEEKALLKQLEQRDKEITSLK-- 759
Query: 570 AHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFIS-VDE 628
+ ++ VEE K +V +D N KA+ + + K+ + S VD+
Sbjct: 760 ------MGNIEDQVEEINGYKVLVTEVDV-PNAKAIRSTMDDFKSKLQDTIIILASNVDD 812
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
K+ +++VPK +++ + A D ++ + I+GGKGGG+ + AQ G EN LS
Sbjct: 813 ---KVSMVATVPK-SLTNNVKAGDLIKQMAPIVGGKGGGRPDMAQGGGTQPENISKSLSF 868
Query: 689 ARDY 692
+DY
Sbjct: 869 IKDY 872
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 16/80 (20%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRVV + P S+E CGG H+ +G F I
Sbjct: 641 GAMALFGEKYGDVVRVVNMA-PF---------------SIELCGGIHVRNTSEIGLFKIV 684
Query: 150 SEEAIAKGIRRIVALSGNEA 169
SE G+RRI AL+G A
Sbjct: 685 SESGTGAGVRRIEALTGKAA 704
>sp|P67010|SYA_STAAM Alanine--tRNA ligase OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=alaS PE=1 SV=1
Length = 876
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 176/364 (48%), Gaps = 50/364 (13%)
Query: 330 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEV 389
RR I NH+ATH+L+ AL+ VLG +Q GSLV DRLRFDF++ G MT D++ + E V
Sbjct: 558 RRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLV 617
Query: 390 IRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGM 449
+ V + +A AK++ G A+F E Y D VRVV + P
Sbjct: 618 NEEIWKGIDVNIQEMDIASAKEM-GAMALFGEKYGDVVRVVNMA-PF------------- 662
Query: 450 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN 509
S+E CGG H+ +G F I SE G+RRI AL+G A L
Sbjct: 663 --SIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAA-------------FLY 707
Query: 510 VKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKA 569
+++ NT S+ K + E++ + +++ + LLK +++ E L+
Sbjct: 708 LEDIQEKFNTMKSQMKVKSDDQVVEKLTQL------QDEEKALLKQLEQRDKEITSLK-- 759
Query: 570 AHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFIS-VDE 628
+ ++ VEE K +V +D N KA+ + + K+ + S VD+
Sbjct: 760 ------MGNIEDQVEEINGYKVLVTEVDV-PNAKAIRSTMDDFKSKLQDTIIILASNVDD 812
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
K+ +++VPK +++ + A D ++ + I+GGKGGG+ + AQ G EN LS
Sbjct: 813 ---KVSMVATVPK-SLTNNVKAGDLIKQMAPIVGGKGGGRPDMAQGGGTQPENISKSLSF 868
Query: 689 ARDY 692
+DY
Sbjct: 869 IKDY 872
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 16/80 (20%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRVV + P S+E CGG H+ +G F I
Sbjct: 641 GAMALFGEKYGDVVRVVNMA-PF---------------SIELCGGIHVRNTSEIGLFKIV 684
Query: 150 SEEAIAKGIRRIVALSGNEA 169
SE G+RRI AL+G A
Sbjct: 685 SESGTGAGVRRIEALTGKAA 704
>sp|A5ITE3|SYA_STAA9 Alanine--tRNA ligase OS=Staphylococcus aureus (strain JH9) GN=alaS
PE=3 SV=1
Length = 876
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 176/364 (48%), Gaps = 50/364 (13%)
Query: 330 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEV 389
RR I NH+ATH+L+ AL+ VLG +Q GSLV DRLRFDF++ G MT D++ + E V
Sbjct: 558 RRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLV 617
Query: 390 IRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGM 449
+ V + +A AK++ G A+F E Y D VRVV + P
Sbjct: 618 NEEIWKGIDVNIQEMDIASAKEM-GAMALFGEKYGDVVRVVNMA-PF------------- 662
Query: 450 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN 509
S+E CGG H+ +G F I SE G+RRI AL+G A L
Sbjct: 663 --SIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAA-------------FLY 707
Query: 510 VKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKA 569
+++ NT S+ K + E++ + +++ + LLK +++ E L+
Sbjct: 708 LEDIQEKFNTMKSQMKVKSDDQVVEKLTQL------QDEEKALLKQLEQRDKEITSLK-- 759
Query: 570 AHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFIS-VDE 628
+ ++ VEE K +V +D N KA+ + + K+ + S VD+
Sbjct: 760 ------MGNIEDQVEEINGYKVLVTEVDV-PNAKAIRSTMDDFKSKLQDTIIILASNVDD 812
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
K+ +++VPK +++ + A D ++ + I+GGKGGG+ + AQ G EN LS
Sbjct: 813 ---KVSMVATVPK-SLTNNVKAGDLIKQMAPIVGGKGGGRPDMAQGGGTQPENISKSLSF 868
Query: 689 ARDY 692
+DY
Sbjct: 869 IKDY 872
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 16/80 (20%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRVV + P S+E CGG H+ +G F I
Sbjct: 641 GAMALFGEKYGDVVRVVNMA-PF---------------SIELCGGIHVRNTSEIGLFKIV 684
Query: 150 SEEAIAKGIRRIVALSGNEA 169
SE G+RRI AL+G A
Sbjct: 685 SESGTGAGVRRIEALTGKAA 704
>sp|A6U287|SYA_STAA2 Alanine--tRNA ligase OS=Staphylococcus aureus (strain JH1) GN=alaS
PE=3 SV=1
Length = 876
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 176/364 (48%), Gaps = 50/364 (13%)
Query: 330 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEV 389
RR I NH+ATH+L+ AL+ VLG +Q GSLV DRLRFDF++ G MT D++ + E V
Sbjct: 558 RRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLV 617
Query: 390 IRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGM 449
+ V + +A AK++ G A+F E Y D VRVV + P
Sbjct: 618 NEEIWKGIDVNIQEMDIASAKEM-GAMALFGEKYGDVVRVVNMA-PF------------- 662
Query: 450 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN 509
S+E CGG H+ +G F I SE G+RRI AL+G A L
Sbjct: 663 --SIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAA-------------FLY 707
Query: 510 VKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKA 569
+++ NT S+ K + E++ + +++ + LLK +++ E L+
Sbjct: 708 LEDIQEKFNTMKSQMKVKSDDQVVEKLTQL------QDEEKALLKQLEQRDKEITSLK-- 759
Query: 570 AHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFIS-VDE 628
+ ++ VEE K +V +D N KA+ + + K+ + S VD+
Sbjct: 760 ------MGNIEDQVEEINGYKVLVTEVDV-PNAKAIRSTMDDFKSKLQDTIIILASNVDD 812
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
K+ +++VPK +++ + A D ++ + I+GGKGGG+ + AQ G EN LS
Sbjct: 813 ---KVSMVATVPK-SLTNNVKAGDLIKQMAPIVGGKGGGRPDMAQGGGTQPENISKSLSF 868
Query: 689 ARDY 692
+DY
Sbjct: 869 IKDY 872
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 16/80 (20%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRVV + P S+E CGG H+ +G F I
Sbjct: 641 GAMALFGEKYGDVVRVVNMA-PF---------------SIELCGGIHVRNTSEIGLFKIV 684
Query: 150 SEEAIAKGIRRIVALSGNEA 169
SE G+RRI AL+G A
Sbjct: 685 SESGTGAGVRRIEALTGKAA 704
>sp|A7X328|SYA_STAA1 Alanine--tRNA ligase OS=Staphylococcus aureus (strain Mu3 / ATCC
700698) GN=alaS PE=3 SV=1
Length = 876
Score = 139 bits (351), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/364 (30%), Positives = 176/364 (48%), Gaps = 50/364 (13%)
Query: 330 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEV 389
RR I NH+ATH+L+ AL+ VLG +Q GSLV DRLRFDF++ G MT D++ + E V
Sbjct: 558 RRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLV 617
Query: 390 IRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGM 449
+ V + +A AK++ G A+F E Y D VRVV + P
Sbjct: 618 NEEIWKGIDVNIQEMDIASAKEM-GAMALFGEKYGDVVRVVNMA-PF------------- 662
Query: 450 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN 509
S+E CGG H+ +G F I SE G+RRI AL+G A L
Sbjct: 663 --SIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAA-------------FLY 707
Query: 510 VKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKA 569
+++ NT S+ K + E++ + +++ + LLK +++ E L+
Sbjct: 708 LEDIQEKFNTMKSQMKVKSDDQVVEKLTQL------QDEEKALLKQLEQRDKEITSLK-- 759
Query: 570 AHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFIS-VDE 628
+ ++ VEE K +V +D N KA+ + + K+ + S VD+
Sbjct: 760 ------MGNIEDQVEEINGYKVLVTEVDV-PNAKAIRSTMDDFKSKLQDTIIILASNVDD 812
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
K+ +++VPK +++ + A D ++ + I+GGKGGG+ + AQ G EN LS
Sbjct: 813 ---KVSMVATVPK-SLTNNVKAGDLIKQMAPIVGGKGGGRPDMAQGGGTQPENISKSLSF 868
Query: 689 ARDY 692
+DY
Sbjct: 869 IKDY 872
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 16/80 (20%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRVV + P S+E CGG H+ +G F I
Sbjct: 641 GAMALFGEKYGDVVRVVNMA-PF---------------SIELCGGIHVRNTSEIGLFKIV 684
Query: 150 SEEAIAKGIRRIVALSGNEA 169
SE G+RRI AL+G A
Sbjct: 685 SESGTGAGVRRIEALTGKAA 704
>sp|Q8Y193|SYA_RALSO Alanine--tRNA ligase OS=Ralstonia solanacearum (strain GMI1000)
GN=alaS PE=3 SV=1
Length = 884
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/371 (29%), Positives = 178/371 (47%), Gaps = 50/371 (13%)
Query: 327 SARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAE 386
+ RR M NH+ATH+++ ALR VLG QKGSLV D+ RFDF++ MT Q+++ E
Sbjct: 564 AVRRARTMRNHSATHLMHKALREVLGAHVQQKGSLVDADKTRFDFSHNTPMTPLQIREVE 623
Query: 387 AEVIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQ 446
A V + A++ DA K G A+F E Y D VRV+ +G
Sbjct: 624 ARVNAEILANASTNAQMMGFDDAVK-SGAMALFGEKYGDEVRVLTIG------------- 669
Query: 447 AGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETE 506
+S E CGGTH+A +G F I E +A GIRR+ A++G+ + Q ++T
Sbjct: 670 ----SSKELCGGTHVARTGDIGLFKIVGESGVAAGIRRVEAITGD---NVLHYLQTLDTR 722
Query: 507 VLNVKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERL 566
+ L A L+++I+ + +++ K+++K L ERL
Sbjct: 723 IGEAAAALR----AQPSELTQRIVQVQDQV-----------------KSLEKEL---ERL 758
Query: 567 QKAAHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISV 626
+ AS+ D + S + K + LD G++ K L + ++K A + SV
Sbjct: 759 KSKLAASQG-DELVSQAVDVAGIKVLAAKLD-GADAKTLRETMDKLKDKLKTAAIVLGSV 816
Query: 627 DEAAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVL 686
+ K+ ++ V +A +A + A + V ++ +GGKGGG+ + AQA G + P L
Sbjct: 817 SDG--KVALIAGVTADA-TARIKAGELVNFVAQQVGGKGGGRPDMAQAGGTEPDKLPQAL 873
Query: 687 SKARDYASQQL 697
+ + Q++
Sbjct: 874 AGVTAWVQQKV 884
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 58/123 (47%), Gaps = 24/123 (19%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRV+ +G+ S E CGGTH+A +G F I
Sbjct: 650 GAMALFGEKYGDEVRVLTIGS-----------------SKELCGGTHVARTGDIGLFKIV 692
Query: 150 SEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTLSNPNTADSKALSKKIIDIT 209
E +A GIRR+ A++G+ + Q ++T + L A L+++I+ +
Sbjct: 693 GESGVAAGIRRVEAITGD---NVLHYLQTLDTRIGEAAAALR----AQPSELTQRIVQVQ 745
Query: 210 EEI 212
+++
Sbjct: 746 DQV 748
>sp|A4XKP4|SYA_CALS8 Alanine--tRNA ligase OS=Caldicellulosiruptor saccharolyticus
(strain ATCC 43494 / DSM 8903) GN=alaS PE=3 SV=1
Length = 881
Score = 139 bits (349), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/371 (29%), Positives = 176/371 (47%), Gaps = 49/371 (13%)
Query: 330 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEV 389
R M NHTATH+L+ +LR +LG A Q GSLV P+RLRFDF + ++ +Q+ + E V
Sbjct: 557 RLATMKNHTATHLLHSSLRRILGEHATQSGSLVEPERLRFDFAHFEPLSEEQIVEIEKMV 616
Query: 390 IRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGM 449
I+Q PV L A K+ G A+FDE Y + VRV+ +G
Sbjct: 617 NDIIQQAIPVEKIQTDLDSAIKM-GATALFDEKYSNIVRVIKIG---------------- 659
Query: 450 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN 509
+ S+E CGGTH+ +G F I SE ++A G+RRI A++GN+ + + Q + ++ N
Sbjct: 660 DFSMELCGGTHVDNTGQIGMFKIISESSVAAGVRRIEAITGNKVYEFMLNNQKVLKDIRN 719
Query: 510 -VKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQK 568
+K + A L ++I + +E+ K L LL + SL E LQ
Sbjct: 720 KLKANSDSEIVAKINQLEERITALEKELEKHKL----------LLVDNELSLLYNEGLQ- 768
Query: 569 AAHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISVDE 628
+ + ++ +++ +T + +V+ A+ +++ +
Sbjct: 769 -------IGEFRLIINKKET-----------HDTDYIRLLTDRVREKDS--KAIVLNLIK 808
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
KK L + KEAV G+ V+ + +++GGKGGG+ + AQ G EN L +
Sbjct: 809 QDKKAIVLMACSKEAVKKGIDCGKTVKDVCEVLGGKGGGRPDFAQGGGNKIENLDLAAQR 868
Query: 689 ARDYASQQLSG 699
A + + G
Sbjct: 869 AIELIKSSIEG 879
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 17/129 (13%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+FDE Y + VRV+ +G + S+E CGGTH+ +G F I
Sbjct: 640 GATALFDEKYSNIVRVIKIG----------------DFSMELCGGTHVDNTGQIGMFKII 683
Query: 150 SEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN-VKNTLSNPNTADSKALSKKIIDI 208
SE ++A G+RRI A++GN+ + + Q + ++ N +K + A L ++I +
Sbjct: 684 SESSVAAGVRRIEAITGNKVYEFMLNNQKVLKDIRNKLKANSDSEIVAKINQLEERITAL 743
Query: 209 TEEIAKATL 217
+E+ K L
Sbjct: 744 EKELEKHKL 752
>sp|Q8NW87|SYA_STAAW Alanine--tRNA ligase OS=Staphylococcus aureus (strain MW2) GN=alaS
PE=3 SV=1
Length = 876
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 177/364 (48%), Gaps = 50/364 (13%)
Query: 330 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEV 389
RR I NH+ATH+L+ AL+ VLG +Q GSLV DRLRFDF++ G MT D++ + E V
Sbjct: 558 RRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLV 617
Query: 390 IRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGM 449
+ V + +A AK++ G A+F E Y D VRVV + P
Sbjct: 618 NEEIWKGIDVNIQEMDIASAKEM-GAMALFGEKYGDVVRVVNMA-PF------------- 662
Query: 450 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN 509
S+E CGG H+ +G F I SE G+RRI AL+G A L
Sbjct: 663 --SIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAA-------------FLY 707
Query: 510 VKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKA 569
+++ NT S+ K + +++ + +++ + LLK +++ E L+
Sbjct: 708 LEDIQEKFNTMKSQLKVKSDDQVVDKLTQL------QDEEKALLKQLEQRDKEITSLK-- 759
Query: 570 AHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFIS-VDE 628
+ +++ VEE K +V +D N KA+ + + K+ + S VD+
Sbjct: 760 ------MGNIENQVEEINGYKVLVTEVDV-PNAKAIRSTMDDFKSKLQDTIIILASNVDD 812
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
K+ +++VPK +++ + A D ++ + I+GGKGGG+ + AQ G EN LS
Sbjct: 813 ---KVSMVATVPK-SLTNNVKAGDLIKQMAPIVGGKGGGRPDMAQGGGTQPENISKSLSF 868
Query: 689 ARDY 692
+DY
Sbjct: 869 IKDY 872
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 16/80 (20%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRVV + P S+E CGG H+ +G F I
Sbjct: 641 GAMALFGEKYGDVVRVVNMA-PF---------------SIELCGGIHVRNTSEIGLFKIV 684
Query: 150 SEEAIAKGIRRIVALSGNEA 169
SE G+RRI AL+G A
Sbjct: 685 SESGTGAGVRRIEALTGKAA 704
>sp|Q6G8V1|SYA_STAAS Alanine--tRNA ligase OS=Staphylococcus aureus (strain MSSA476)
GN=alaS PE=3 SV=1
Length = 876
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 177/364 (48%), Gaps = 50/364 (13%)
Query: 330 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEV 389
RR I NH+ATH+L+ AL+ VLG +Q GSLV DRLRFDF++ G MT D++ + E V
Sbjct: 558 RRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLV 617
Query: 390 IRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGM 449
+ V + +A AK++ G A+F E Y D VRVV + P
Sbjct: 618 NEEIWKGIDVNIQEMDIASAKEM-GAMALFGEKYGDVVRVVNMA-PF------------- 662
Query: 450 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN 509
S+E CGG H+ +G F I SE G+RRI AL+G A L
Sbjct: 663 --SIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAA-------------FLY 707
Query: 510 VKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKA 569
+++ NT S+ K + +++ + +++ + LLK +++ E L+
Sbjct: 708 LEDIQEKFNTMKSQLKVKSDDQVVDKLTQL------QDEEKALLKQLEQRDKEITSLK-- 759
Query: 570 AHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFIS-VDE 628
+ +++ VEE K +V +D N KA+ + + K+ + S VD+
Sbjct: 760 ------MGNIENQVEEINGYKVLVTEVDV-PNAKAIRSTMDDFKSKLQDTIIILASNVDD 812
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
K+ +++VPK +++ + A D ++ + I+GGKGGG+ + AQ G EN LS
Sbjct: 813 ---KVSMVATVPK-SLTNNVKAGDLIKQMAPIVGGKGGGRPDMAQGGGTQPENISKSLSF 868
Query: 689 ARDY 692
+DY
Sbjct: 869 IKDY 872
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 16/80 (20%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRVV + P S+E CGG H+ +G F I
Sbjct: 641 GAMALFGEKYGDVVRVVNMA-PF---------------SIELCGGIHVRNTSEIGLFKIV 684
Query: 150 SEEAIAKGIRRIVALSGNEA 169
SE G+RRI AL+G A
Sbjct: 685 SESGTGAGVRRIEALTGKAA 704
>sp|A8Z4F6|SYA_STAAT Alanine--tRNA ligase OS=Staphylococcus aureus (strain USA300 /
TCH1516) GN=alaS PE=3 SV=1
Length = 877
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 176/364 (48%), Gaps = 50/364 (13%)
Query: 330 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEV 389
RR I NH+ATH+L+ AL+ VLG +Q GSLV DRLRFDF++ G MT D++ + E V
Sbjct: 559 RRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLV 618
Query: 390 IRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGM 449
+ V + +A AK++ G A+F E Y D VRVV + P
Sbjct: 619 NEEIWKGIDVNIQEMDIASAKEM-GAMALFGEKYGDVVRVVNMA-PF------------- 663
Query: 450 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN 509
S+E CGG H+ +G F I SE G+RRI AL+G A L
Sbjct: 664 --SIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAA-------------FLY 708
Query: 510 VKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKA 569
+++ NT S+ K + +++ + +++ + LLK +++ E L+
Sbjct: 709 LEDIQEKFNTMKSQLKVKSDDQVVDKLTQL------QDEEKALLKQLEQRDKEITSLK-- 760
Query: 570 AHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFIS-VDE 628
+ ++ VEE K +V +D N KA+ + + K+ + S VD+
Sbjct: 761 ------MGNIEDQVEEINGYKVLVTEVDV-PNAKAIRSTMDDFKSKLQDTIIILASNVDD 813
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
K+ +++VPK +++ + A D ++ + I+GGKGGG+ + AQ G EN LS
Sbjct: 814 ---KVSMVATVPK-SLTNNVKAGDLIKQMAPIVGGKGGGRPDMAQGGGTQPENISKSLSF 869
Query: 689 ARDY 692
+DY
Sbjct: 870 IKDY 873
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 16/80 (20%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRVV + P S+E CGG H+ +G F I
Sbjct: 642 GAMALFGEKYGDVVRVVNMA-PF---------------SIELCGGIHVRNTSEIGLFKIV 685
Query: 150 SEEAIAKGIRRIVALSGNEA 169
SE G+RRI AL+G A
Sbjct: 686 SESGTGAGVRRIEALTGKAA 705
>sp|B0TZY8|SYA_FRAP2 Alanine--tRNA ligase OS=Francisella philomiragia subsp.
philomiragia (strain ATCC 25017) GN=alaS PE=3 SV=1
Length = 865
Score = 138 bits (348), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/368 (30%), Positives = 179/368 (48%), Gaps = 57/368 (15%)
Query: 330 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEV 389
R +NH+ATH+L+ L+ +LG A+QKGSLV ++LRFDFT+ A++ ++++ E V
Sbjct: 547 RLATAANHSATHLLHKVLKIILGSHAEQKGSLVDDNKLRFDFTHDKAISRVEIEQIETLV 606
Query: 390 IRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGM 449
+ ++ PV S AK + G A+F E Y D VRV+ +G
Sbjct: 607 NQQIRANYPVATIETSQEKAKSL-GAEALFGEKYGDIVRVISMG---------------- 649
Query: 450 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN 509
+ S+E CGGTH+A +G F I SE IA GIRRI A++ N KAIK E ++
Sbjct: 650 DFSIELCGGTHVAYTGDIGLFKIVSESGIASGIRRIEAITAN---KAIKYTFATENKLAA 706
Query: 510 VKN-TLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQK 568
+K T SN DS L K L+++L+ +K E +L+K
Sbjct: 707 IKEITKSN----DSNLLDK---------------------LQSMLEQLKNQEKEIAKLKK 741
Query: 569 AAHASKVLDRVKSLVEERKAD--KFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISV 626
+L S ++E D K I+ L+ G + K L + K+ M A+ ++
Sbjct: 742 -----DILSGANSDIKESSIDGIKLIIANLE-GVDIKTLREKIDDYKSKNDKMVAVLSTI 795
Query: 627 DEAAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVL 686
+ A K+ + V K ++++ + A D + + + GKGGG+ + AQ G N N L
Sbjct: 796 N--ADKVQFVIGVSK-SITSLIKAGDIAKEFSGYIDGKGGGRPDMAQGGGNNSTNIDKAL 852
Query: 687 SKARDYAS 694
S ++ S
Sbjct: 853 SDLENHIS 860
Score = 63.5 bits (153), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 16/82 (19%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRV+ +G + S+E CGGTH+A +G F I
Sbjct: 630 GAEALFGEKYGDIVRVISMG----------------DFSIELCGGTHVAYTGDIGLFKIV 673
Query: 150 SEEAIAKGIRRIVALSGNEATK 171
SE IA GIRRI A++ N+A K
Sbjct: 674 SESGIASGIRRIEAITANKAIK 695
>sp|Q30YS5|SYA_DESDG Alanine--tRNA ligase OS=Desulfovibrio desulfuricans (strain G20)
GN=alaS PE=3 SV=1
Length = 880
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 164/343 (47%), Gaps = 49/343 (14%)
Query: 336 NHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEVIRIVQT 395
NHT THIL+ ALR VLG Q GSLV P+RLRFDFT+ AMT +++ E EV R++ +
Sbjct: 570 NHTCTHILHAALRKVLGDHVKQAGSLVGPERLRFDFTHISAMTPEEILAVENEVNRVILS 629
Query: 396 KKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEF 455
+ ++ + DA + KG A+F E Y VRVV + P E SVE
Sbjct: 630 DIALNSEHMAYDDAVQ-KGAMALFGEKYESEVRVVSI--PGE--------------SVEL 672
Query: 456 CGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTLS 515
CGGTHL G F I+SE +A G+RRI A++G +A + + + EV +
Sbjct: 673 CGGTHLRATGQAGSFYITSESGVAAGVRRIEAVTGWDAVRLFMQQRAELHEVAGLVKGKP 732
Query: 516 NPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKAAHASKV 575
K L K++ +T+KK + E+L A + K
Sbjct: 733 GDIAGRVKTLQKEV------------------------RTLKKDM---EKLAAQAASGKG 765
Query: 576 LDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISVDEAAKKIFC 635
+ + S VEE K + L G+N KAL + V++ A ++VD K+
Sbjct: 766 RNLMDS-VEEVNGVKLLAASL-PGANVKALREVMDDVRSKLTSGVACLVAVD--GDKVHM 821
Query: 636 LSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPN 678
L +V K+ + TA ++ + +GG GGG+ + AQA G +
Sbjct: 822 LIAVSKD-LHDRFTAPALIKDVAARIGGSGGGRPDMAQAGGTD 863
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 71/174 (40%), Gaps = 43/174 (24%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y VRVV + P E SVE CGGTHL G F I+
Sbjct: 647 GAMALFGEKYESEVRVVSI--PGE--------------SVELCGGTHLRATGQAGSFYIT 690
Query: 150 SEEAIAKGIRRIVALSGNEATKAI----------------------KKAQVIETEVLNVK 187
SE +A G+RRI A++G +A + + + ++ EV +K
Sbjct: 691 SESGVAAGVRRIEAVTGWDAVRLFMQQRAELHEVAGLVKGKPGDIAGRVKTLQKEVRTLK 750
Query: 188 NTLSNPNTADSKALSKKIIDITEEIAK-----ATLPYWKKEDLRNLLKTMKKSL 236
+ + + ++D EE+ A+LP + LR ++ ++ L
Sbjct: 751 KDMEKLAAQAASGKGRNLMDSVEEVNGVKLLAASLPGANVKALREVMDDVRSKL 804
>sp|A6QHF9|SYA_STAAE Alanine--tRNA ligase OS=Staphylococcus aureus (strain Newman)
GN=alaS PE=3 SV=1
Length = 876
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 176/364 (48%), Gaps = 50/364 (13%)
Query: 330 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEV 389
RR I NH+ATH+L+ AL+ VLG +Q GSLV DRLRFDF++ G MT D++ + E V
Sbjct: 558 RRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLV 617
Query: 390 IRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGM 449
+ V + +A AK++ G A+F E Y D VRVV + P
Sbjct: 618 NEEIWKGIDVNIQEMDIASAKEM-GAMALFGEKYGDVVRVVNMA-PF------------- 662
Query: 450 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN 509
S+E CGG H+ +G F I SE G+RRI AL+G A L
Sbjct: 663 --SIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAA-------------FLY 707
Query: 510 VKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKA 569
+++ NT S+ K + +++ + +++ + LLK +++ E L+
Sbjct: 708 LEDIQEKFNTMKSQLKVKSDDQVVDKLTQL------QDEEKALLKQLEQRDKEITSLK-- 759
Query: 570 AHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFIS-VDE 628
+ ++ VEE K +V +D N KA+ + + K+ + S VD+
Sbjct: 760 ------MGNIEDQVEEINGYKVLVTEVDV-PNAKAIRSTMDDFKSKLQDTIIILASNVDD 812
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
K+ +++VPK +++ + A D ++ + I+GGKGGG+ + AQ G EN LS
Sbjct: 813 ---KVSMVATVPK-SLTNNVKAGDLIKQMAPIVGGKGGGRPDMAQGGGTQPENISKSLSF 868
Query: 689 ARDY 692
+DY
Sbjct: 869 IKDY 872
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 16/80 (20%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRVV + P S+E CGG H+ +G F I
Sbjct: 641 GAMALFGEKYGDVVRVVNMA-PF---------------SIELCGGIHVRNTSEIGLFKIV 684
Query: 150 SEEAIAKGIRRIVALSGNEA 169
SE G+RRI AL+G A
Sbjct: 685 SESGTGAGVRRIEALTGKAA 704
>sp|Q5HFE4|SYA_STAAC Alanine--tRNA ligase OS=Staphylococcus aureus (strain COL) GN=alaS
PE=3 SV=1
Length = 876
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 176/364 (48%), Gaps = 50/364 (13%)
Query: 330 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEV 389
RR I NH+ATH+L+ AL+ VLG +Q GSLV DRLRFDF++ G MT D++ + E V
Sbjct: 558 RRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLV 617
Query: 390 IRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGM 449
+ V + +A AK++ G A+F E Y D VRVV + P
Sbjct: 618 NEEIWKGIDVNIQEMDIASAKEM-GAMALFGEKYGDVVRVVNMA-PF------------- 662
Query: 450 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN 509
S+E CGG H+ +G F I SE G+RRI AL+G A L
Sbjct: 663 --SIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAA-------------FLY 707
Query: 510 VKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKA 569
+++ NT S+ K + +++ + +++ + LLK +++ E L+
Sbjct: 708 LEDIQEKFNTMKSQLKVKSDDQVVDKLTQL------QDEEKALLKQLEQRDKEITSLK-- 759
Query: 570 AHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFIS-VDE 628
+ ++ VEE K +V +D N KA+ + + K+ + S VD+
Sbjct: 760 ------MGNIEDQVEEINGYKVLVTEVDV-PNAKAIRSTMDDFKSKLQDTIIILASNVDD 812
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
K+ +++VPK +++ + A D ++ + I+GGKGGG+ + AQ G EN LS
Sbjct: 813 ---KVSMVATVPK-SLTNNVKAGDLIKQMAPIVGGKGGGRPDMAQGGGTQPENISKSLSF 868
Query: 689 ARDY 692
+DY
Sbjct: 869 IKDY 872
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 16/80 (20%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRVV + P S+E CGG H+ +G F I
Sbjct: 641 GAMALFGEKYGDVVRVVNMA-PF---------------SIELCGGIHVRNTSEIGLFKIV 684
Query: 150 SEEAIAKGIRRIVALSGNEA 169
SE G+RRI AL+G A
Sbjct: 685 SESGTGAGVRRIEALTGKAA 704
>sp|Q2FXV9|SYA_STAA8 Alanine--tRNA ligase OS=Staphylococcus aureus (strain NCTC 8325)
GN=alaS PE=3 SV=1
Length = 876
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 176/364 (48%), Gaps = 50/364 (13%)
Query: 330 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEV 389
RR I NH+ATH+L+ AL+ VLG +Q GSLV DRLRFDF++ G MT D++ + E V
Sbjct: 558 RRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLV 617
Query: 390 IRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGM 449
+ V + +A AK++ G A+F E Y D VRVV + P
Sbjct: 618 NEEIWKGIDVNIQEMDIASAKEM-GAMALFGEKYGDVVRVVNMA-PF------------- 662
Query: 450 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN 509
S+E CGG H+ +G F I SE G+RRI AL+G A L
Sbjct: 663 --SIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAA-------------FLY 707
Query: 510 VKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKA 569
+++ NT S+ K + +++ + +++ + LLK +++ E L+
Sbjct: 708 LEDIQEKFNTMKSQLKVKSDDQVVDKLTQL------QDEEKALLKQLEQRDKEITSLK-- 759
Query: 570 AHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFIS-VDE 628
+ ++ VEE K +V +D N KA+ + + K+ + S VD+
Sbjct: 760 ------MGNIEDQVEEINGYKVLVTEVDV-PNAKAIRSTMDDFKSKLQDTIIILASNVDD 812
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
K+ +++VPK +++ + A D ++ + I+GGKGGG+ + AQ G EN LS
Sbjct: 813 ---KVSMVATVPK-SLTNNVKAGDLIKQMAPIVGGKGGGRPDMAQGGGTQPENISKSLSF 868
Query: 689 ARDY 692
+DY
Sbjct: 869 IKDY 872
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 16/80 (20%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRVV + P S+E CGG H+ +G F I
Sbjct: 641 GAMALFGEKYGDVVRVVNMA-PF---------------SIELCGGIHVRNTSEIGLFKIV 684
Query: 150 SEEAIAKGIRRIVALSGNEA 169
SE G+RRI AL+G A
Sbjct: 685 SESGTGAGVRRIEALTGKAA 704
>sp|Q2FGA8|SYA_STAA3 Alanine--tRNA ligase OS=Staphylococcus aureus (strain USA300)
GN=alaS PE=3 SV=1
Length = 876
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 176/364 (48%), Gaps = 50/364 (13%)
Query: 330 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEV 389
RR I NH+ATH+L+ AL+ VLG +Q GSLV DRLRFDF++ G MT D++ + E V
Sbjct: 558 RRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLV 617
Query: 390 IRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGM 449
+ V + +A AK++ G A+F E Y D VRVV + P
Sbjct: 618 NEEIWKGIDVNIQEMDIASAKEM-GAMALFGEKYGDVVRVVNMA-PF------------- 662
Query: 450 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN 509
S+E CGG H+ +G F I SE G+RRI AL+G A L
Sbjct: 663 --SIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAA-------------FLY 707
Query: 510 VKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKA 569
+++ NT S+ K + +++ + +++ + LLK +++ E L+
Sbjct: 708 LEDIQEKFNTMKSQLKVKSDDQVVDKLTQL------QDEEKALLKQLEQRDKEITSLK-- 759
Query: 570 AHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFIS-VDE 628
+ ++ VEE K +V +D N KA+ + + K+ + S VD+
Sbjct: 760 ------MGNIEDQVEEINGYKVLVTEVDV-PNAKAIRSTMDDFKSKLQDTIIILASNVDD 812
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
K+ +++VPK +++ + A D ++ + I+GGKGGG+ + AQ G EN LS
Sbjct: 813 ---KVSMVATVPK-SLTNNVKAGDLIKQMAPIVGGKGGGRPDMAQGGGTQPENISKSLSF 868
Query: 689 ARDY 692
+DY
Sbjct: 869 IKDY 872
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 16/80 (20%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRVV + P S+E CGG H+ +G F I
Sbjct: 641 GAMALFGEKYGDVVRVVNMA-PF---------------SIELCGGIHVRNTSEIGLFKIV 684
Query: 150 SEEAIAKGIRRIVALSGNEA 169
SE G+RRI AL+G A
Sbjct: 685 SESGTGAGVRRIEALTGKAA 704
>sp|Q3ILF3|SYA_PSEHT Alanine--tRNA ligase OS=Pseudoalteromonas haloplanktis (strain TAC
125) GN=alaS PE=3 SV=1
Length = 868
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/360 (32%), Positives = 182/360 (50%), Gaps = 51/360 (14%)
Query: 328 ARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEA 387
ARR I NHTATHIL+ LR +LG QKGSLV +RLRFDF++ A+T +++++ E
Sbjct: 546 ARRERIKKNHTATHILHETLRQLLGEHVGQKGSLVQAERLRFDFSHFEAVTKEELREIER 605
Query: 388 EVIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQA 447
V ++ + +L ++ DAK KG A+F E Y D VRVV +G
Sbjct: 606 VVNDEIRCNFALSTELMAIDDAKA-KGAMALFGEKYDDEVRVVTIG-------------- 650
Query: 448 GMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEV 507
+ S+E CGGTH+ A +G F I SE IA G+RRI A++G +A A V E E
Sbjct: 651 --DYSIELCGGTHVERAGDIGLFKIVSESGIAAGVRRIEAVTGADAI-----AYVSEQE- 702
Query: 508 LNVKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQ 567
N ++ ADS ++ +K+ + + K + L + + ++L
Sbjct: 703 -QKLNDVAAVVKADSASVLEKVTALLD----------KSKQLEKQIAQLN------DKLA 745
Query: 568 KAAHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTS-APHMAAMFISV 626
AA AS +LD S+VE I + G+ +KAL + +K + A+ ++
Sbjct: 746 SAAGAS-LLD---SVVEINGIKLLIANV--KGTESKALRGMVDDLKNKIGSGVIALGVAS 799
Query: 627 DEAAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVL 686
D+ K+ ++ V K+ ++ + A + V ++ +GGKGGG+ + AQA G EN L
Sbjct: 800 DD---KVSLIAGVTKD-LTGRVKAGELVNHMASQVGGKGGGRPDMAQAGGSEPENLTAAL 855
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 25/134 (18%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRVV +G + S+E CGGTH+ A +G F I
Sbjct: 631 GAMALFGEKYDDEVRVVTIG----------------DYSIELCGGTHVERAGDIGLFKIV 674
Query: 150 SEEAIAKGIRRIVALSGNEATKAIKK--------AQVIETEVLNVKNTLSNPNTADSKAL 201
SE IA G+RRI A++G +A + + A V++ + +V ++ SK L
Sbjct: 675 SESGIAAGVRRIEAVTGADAIAYVSEQEQKLNDVAAVVKADSASVLEKVT-ALLDKSKQL 733
Query: 202 SKKIIDITEEIAKA 215
K+I + +++A A
Sbjct: 734 EKQIAQLNDKLASA 747
>sp|Q5E7G5|SYA_VIBF1 Alanine--tRNA ligase OS=Vibrio fischeri (strain ATCC 700601 /
ES114) GN=alaS PE=3 SV=1
Length = 859
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 174/369 (47%), Gaps = 63/369 (17%)
Query: 329 RRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAE 388
RR I+ NH+ATH+L+ ALR VLG QKGSLV + LRFDF++ A+ A+++++ E
Sbjct: 554 RRAAIILNHSATHLLHAALRQVLGEHVTQKGSLVKAENLRFDFSHLEAVKAEELRQVERI 613
Query: 389 VIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAG 448
V + ++ + L + DA K KG A+F E Y D VRV+ +G
Sbjct: 614 VNQQIRLNHTIETDLMDI-DAAKEKGAMALFGEKYDDEVRVLSMG--------------- 657
Query: 449 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVL 508
E S E CGG H + +G F I+SE IA GIRRI A++G A AI+ Q + L
Sbjct: 658 -EFSTELCGGIHASSTGDIGLFKITSEGGIAAGIRRIEAVTGEAALDAIEAQQKAADKKL 716
Query: 509 NVKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQK 568
N + +K L K+I + +++A S + A + K
Sbjct: 717 N-------EAASKAKQLEKEIQQLKDKLA---------------------SQESASLINK 748
Query: 569 AAHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISVDE 628
V+E K +V LD G+ KAL + ++K M +V E
Sbjct: 749 --------------VQEIAGTKVLVAQLD-GAENKALRGMVDELKNQIGSGIIMLGNVSE 793
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
K+ ++ V K+ + + A + V + +GGKGGG+ + AQA G + E P L+
Sbjct: 794 G--KVGLIAGVTKDLIGQ-VKAGELVNMVAQQVGGKGGGRPDMAQAGGTDAEALPNALAS 850
Query: 689 ARDYASQQL 697
+ +++L
Sbjct: 851 VEAWLTERL 859
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 76/167 (45%), Gaps = 43/167 (25%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRV+ +G E S E CGG H + +G F I+
Sbjct: 638 GAMALFGEKYDDEVRVLSMG----------------EFSTELCGGIHASSTGDIGLFKIT 681
Query: 150 SEEAIAKGIRRIVALSGNEATKAIK---------------KAQVIETEVLNVKNTLSNPN 194
SE IA GIRRI A++G A AI+ KA+ +E E+ +K+ L++
Sbjct: 682 SEGGIAAGIRRIEAVTGEAALDAIEAQQKAADKKLNEAASKAKQLEKEIQQLKDKLASQE 741
Query: 195 TADSKALSKKIIDITEEIAK-----ATLPYWKKEDLRNLLKTMKKSL 236
+A +I+ +EIA A L + + LR ++ +K +
Sbjct: 742 SA-------SLINKVQEIAGTKVLVAQLDGAENKALRGMVDELKNQI 781
>sp|Q6LMU3|SYA_PHOPR Alanine--tRNA ligase OS=Photobacterium profundum GN=alaS PE=3 SV=2
Length = 873
Score = 137 bits (345), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 179/369 (48%), Gaps = 49/369 (13%)
Query: 329 RRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAE 388
RR I NH+ATH+L+ ALR +LG QKGSLV PD LRFDF+N A+ +Q+++ E
Sbjct: 554 RRTAITLNHSATHLLHSALRNLLGEHVAQKGSLVKPDALRFDFSNLEAVKPEQLREIERV 613
Query: 389 VIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAG 448
V ++ + + + AK+ KG A+F E Y D VRV+ +G
Sbjct: 614 VNEQIRLNHSIDTNIMDIESAKQ-KGAMALFGEKYDDEVRVLSMG--------------- 657
Query: 449 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVL 508
E S E CGG H +G F I+SE IA GIRRI A++G A A+ + + +E
Sbjct: 658 -EFSTELCGGIHAKNTGDIGLFKITSEGGIAAGIRRIEAVTGAAAIDALHAQEALLSETA 716
Query: 509 NVKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQK 568
++ + D+ +++ K+ A L + K+ ++K + + +
Sbjct: 717 SIVKS-------DAASVATKV--------SALLAHSKQ---------LEKDIQQLQDKLA 752
Query: 569 AAHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISVDE 628
A ++ +LD+ K E K ++ LD G++ KAL L ++K + +V
Sbjct: 753 AQESAGLLDQAK----EINGVKVLITQLD-GADNKALRGMLDEIKNKLGSGIVVLGNV-- 805
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
+ K+ + V K+ ++ + A + V + +GGKGGG+ + AQA G + P L
Sbjct: 806 SGDKVGLIVGVTKD-LTGKVKAGELVNMVAQQVGGKGGGRPDMAQAGGTDAAALPAALES 864
Query: 689 ARDYASQQL 697
+ +++L
Sbjct: 865 VTPWLTEKL 873
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 83/178 (46%), Gaps = 32/178 (17%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRV+ +G E S E CGG H +G F I+
Sbjct: 638 GAMALFGEKYDDEVRVLSMG----------------EFSTELCGGIHAKNTGDIGLFKIT 681
Query: 150 SEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN-VKNTLSNPNT------ADSKALS 202
SE IA GIRRI A++G A A+ + + +E + VK+ ++ T A SK L
Sbjct: 682 SEGGIAAGIRRIEAVTGAAAIDALHAQEALLSETASIVKSDAASVATKVSALLAHSKQLE 741
Query: 203 KKIIDITEEIA---KATLPYWKKEDLRNLLKTMKKSLDEAERLQKAAHASKVLDRVKS 257
K I + +++A A L KE N +K + LD A+ KA +LD +K+
Sbjct: 742 KDIQQLQDKLAAQESAGLLDQAKE--INGVKVLITQLDGAD--NKALRG--MLDEIKN 793
>sp|B2SH99|SYA_FRATM Alanine--tRNA ligase OS=Francisella tularensis subsp. mediasiatica
(strain FSC147) GN=alaS PE=3 SV=1
Length = 865
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 180/364 (49%), Gaps = 53/364 (14%)
Query: 330 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEV 389
R +NH+ATH+L+ AL+ VLG A+QKGSLV DRLRFDFT+ A++ ++++ E V
Sbjct: 547 RLATAANHSATHLLHKALKLVLGGHAEQKGSLVDEDRLRFDFTHDKAISRSEIEQIELLV 606
Query: 390 IRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGM 449
+ ++ PV S AK + G A+F E Y D VRV+ +G
Sbjct: 607 NQQIRANYPVTTIEISQQKAKSL-GAEALFGEKYGDIVRVISMG---------------- 649
Query: 450 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN 509
+ S+E CGGTH+A +G F ++SE +IA G+RRI A++ A KAI+ E +++
Sbjct: 650 DFSIELCGGTHVAYTGDIGLFKVTSEGSIASGVRRIEAVT---ADKAIRHTFTNENKIIA 706
Query: 510 VKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKA 569
+K++L KA +ID ++++L+ +K + +L+K
Sbjct: 707 IKDSL--------KANDINLID----------------KIKSMLEQIKNQEKQIAKLKKE 742
Query: 570 AHASKVLDRVKSLVEERKAD-KFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISVDE 628
+ D + E D K +V +D G + K L + K+ + A+ + +
Sbjct: 743 LLSGSSND----IKETNIGDIKVVVANVD-GVDVKTLRNKIDDYKSKNTKVIAVLTTTN- 796
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
A K+ + V A++ + A D + L+ + GKGGG+A+ AQ G N N LS+
Sbjct: 797 -ADKVQFVIGVSN-ALTTLIKAGDIAKELSSHIDGKGGGRADMAQGGGNNSANIDQALSQ 854
Query: 689 ARDY 692
+
Sbjct: 855 VEKF 858
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 22/128 (17%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRV+ +G + S+E CGGTH+A +G F ++
Sbjct: 630 GAEALFGEKYGDIVRVISMG----------------DFSIELCGGTHVAYTGDIGLFKVT 673
Query: 150 SEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTL--SNPNTADS-KALSKKII 206
SE +IA G+RRI A++ A KAI+ E +++ +K++L ++ N D K++ ++I
Sbjct: 674 SEGSIASGVRRIEAVT---ADKAIRHTFTNENKIIAIKDSLKANDINLIDKIKSMLEQIK 730
Query: 207 DITEEIAK 214
+ ++IAK
Sbjct: 731 NQEKQIAK 738
>sp|A9B660|SYA_HERA2 Alanine--tRNA ligase OS=Herpetosiphon aurantiacus (strain ATCC
23779 / DSM 785) GN=alaS PE=3 SV=1
Length = 889
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 78/180 (43%), Positives = 114/180 (63%), Gaps = 3/180 (1%)
Query: 327 SARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAE 386
+ARRR I+ NHTATH+L+ ALR LG A+QKGSLVAP+RLRFDF N+ ++++Q+++ E
Sbjct: 556 AARRRDIVRNHTATHLLHRALRDTLGDHAEQKGSLVAPERLRFDFNNQKGLSSEQLQQIE 615
Query: 387 AEVIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQ 446
+V ++ V A +L A+++ G A+F E Y D VRVV VG S+
Sbjct: 616 DQVNAWIRADSKVEAAEMALPQAREL-GAMALFGEKYGDVVRVVTVGCGNASDHIHTNSE 674
Query: 447 AGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAI-KKAQVIET 505
A + S E CGG H+A +G F I SE ++A G+RRI A++G A + + ++AQ+I T
Sbjct: 675 APV-CSRELCGGVHVARTGEIGFFKIVSEGSVASGVRRIEAVTGRAAAEWVSQQAQLIRT 733
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRVV VG S+A + S E CGG H+A +G F I
Sbjct: 642 GAMALFGEKYGDVVRVVTVGCGNASDHIHTNSEAPV-CSRELCGGVHVARTGEIGFFKIV 700
Query: 150 SEEAIAKGIRRIVALSGNEATKAI-KKAQVIET 181
SE ++A G+RRI A++G A + + ++AQ+I T
Sbjct: 701 SEGSVASGVRRIEAVTGRAAAEWVSQQAQLIRT 733
>sp|Q6GG85|SYA_STAAR Alanine--tRNA ligase OS=Staphylococcus aureus (strain MRSA252)
GN=alaS PE=3 SV=1
Length = 876
Score = 136 bits (343), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 175/364 (48%), Gaps = 50/364 (13%)
Query: 330 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEV 389
RR I NH+ATH+L+ AL+ VLG +Q GSLV DRLRFDF++ G MT D++ + E V
Sbjct: 558 RRDIQKNHSATHLLHAALKSVLGDHVNQAGSLVEADRLRFDFSHFGPMTNDEIDQVERLV 617
Query: 390 IRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGM 449
+ V + + AK++ G A+F E Y D VRVV + P
Sbjct: 618 NEEIWKGIDVNIQEMDIVSAKEM-GAMALFGEKYGDVVRVVNMA-PF------------- 662
Query: 450 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN 509
S+E CGG H+ +G F I SE G+RRI AL+G A L
Sbjct: 663 --SIELCGGIHVRNTSEIGLFKIVSESGTGAGVRRIEALTGKAA-------------FLY 707
Query: 510 VKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKA 569
+++ NT S+ K + +++ + +++ + LLK +++ E L+
Sbjct: 708 LEDIQEKFNTMKSQLKVKSDNQVVDKLTQL------QDEEKALLKQLEQRDKEITSLK-- 759
Query: 570 AHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFIS-VDE 628
+ ++ VEE K +V +D N KA+ + + K+ + S VD+
Sbjct: 760 ------MGNIEDQVEEINGYKVLVTEVDV-PNAKAIRSTMDDFKSKLQDTIIILASNVDD 812
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
K+ +++VPK +++ + A D ++ + I+GGKGGG+ + AQ G EN LS
Sbjct: 813 ---KVSMVATVPK-SLTNNVKAGDLIKQMAPIVGGKGGGRPDMAQGGGTQPENISKSLSF 868
Query: 689 ARDY 692
+DY
Sbjct: 869 IKDY 872
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 37/80 (46%), Gaps = 16/80 (20%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRVV + P S+E CGG H+ +G F I
Sbjct: 641 GAMALFGEKYGDVVRVVNMA-PF---------------SIELCGGIHVRNTSEIGLFKIV 684
Query: 150 SEEAIAKGIRRIVALSGNEA 169
SE G+RRI AL+G A
Sbjct: 685 SESGTGAGVRRIEALTGKAA 704
>sp|Q2SBT9|SYA_HAHCH Alanine--tRNA ligase OS=Hahella chejuensis (strain KCTC 2396)
GN=alaS PE=3 SV=1
Length = 876
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/371 (29%), Positives = 176/371 (47%), Gaps = 49/371 (13%)
Query: 329 RRRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAE 388
+R+ NH+ATH+L+ ALR VLG QKGSLV P+RLRFDF + MT +Q+++ E+
Sbjct: 554 KRKATALNHSATHLLHAALRKVLGDHVAQKGSLVDPERLRFDFAHFEPMTQEQIRQVESI 613
Query: 389 VIRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAG 448
V ++ V ++ + DA + +G A+F E Y D VRV+ +G
Sbjct: 614 VNAQIRANTSVSTEVMGM-DAARERGAMALFGEKYGDTVRVLAMGES------------- 659
Query: 449 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEV- 507
+ S+E CGGTH+ +G F I+SE A G+RRI AL+G A ++ + + ++
Sbjct: 660 -DFSIELCGGTHVERTGDIGMFVIASEAGTAAGVRRIEALTGQPAENWVQSSDALLRDIA 718
Query: 508 LNVKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQ 567
+ VK N TA K +R L++ ++ E ++++
Sbjct: 719 VLVK---GNRETAADK-------------------------VRALIERSRQLEKEVDQVK 750
Query: 568 KAAHASKVLDRVKSLVEERKADKFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISVD 627
+S D S V + K K + LD G + KAL + Q+K + SV+
Sbjct: 751 AKLASSAGSDLAASAV-DVKGLKVLAAKLD-GVDRKALMDTVDQLKNKLGQAVVLLASVE 808
Query: 628 EAAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLS 687
+ I ++ V K A SA + A D V+ + + +GGKGGG+ + AQ G L+
Sbjct: 809 DGKASI--VAGVTK-AESAKVKAGDLVKMVAEQLGGKGGGRPDMAQGGGVELGKLDAALA 865
Query: 688 KARDYASQQLS 698
+ QL
Sbjct: 866 SVNAWVEGQLG 876
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 45/90 (50%), Gaps = 14/90 (15%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRV+ +G + S+E CGGTH+ +G F I+
Sbjct: 638 GAMALFGEKYGDTVRVLAMGES--------------DFSIELCGGTHVERTGDIGMFVIA 683
Query: 150 SEEAIAKGIRRIVALSGNEATKAIKKAQVI 179
SE A G+RRI AL+G A ++ + +
Sbjct: 684 SEAGTAAGVRRIEALTGQPAENWVQSSDAL 713
>sp|A4IZ01|SYA_FRATW Alanine--tRNA ligase OS=Francisella tularensis subsp. tularensis
(strain WY96-3418) GN=alaS PE=3 SV=1
Length = 865
Score = 136 bits (342), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 109/364 (29%), Positives = 180/364 (49%), Gaps = 53/364 (14%)
Query: 330 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEV 389
R +NH+ATH+L+ AL+ VLG A+QKGSLV +RLRFDFT+ A++ ++++ E V
Sbjct: 547 RLATAANHSATHLLHKALKLVLGGHAEQKGSLVDENRLRFDFTHDKAISRSEIEQIELLV 606
Query: 390 IRIVQTKKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGM 449
+ ++ PV S AK + G A+F E Y D VRV+ +G
Sbjct: 607 NQQIRANYPVTTIETSQQKAKSL-GAEALFGEKYGDIVRVISMG---------------- 649
Query: 450 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLN 509
+ S+E CGGTH+A +G F ++SE +IA G+RRI A++ A KAI+ E +++
Sbjct: 650 DFSIELCGGTHVAYTGDIGLFKVTSEGSIASGVRRIEAVT---ADKAIRHTFTNENKIIA 706
Query: 510 VKNTLSNPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKA 569
+K++L KA +ID ++++L+ +K + +L+K
Sbjct: 707 IKDSL--------KANDTNLID----------------KIKSMLEQIKNQEKQIAKLKKE 742
Query: 570 AHASKVLDRVKSLVEERKAD-KFIVEILDAGSNTKALDAALKQVKTSAPHMAAMFISVDE 628
+ D + E D K +V +D G + K L + K+ + A+ + +
Sbjct: 743 LLSGSSND----IKETNIGDIKVVVANVD-GVDVKTLRNKIDDYKSKNTKVIAVLTTTN- 796
Query: 629 AAKKIFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSK 688
A K+ + V A++ + A D + L+ + GKGGG+A+ AQ G N N LS+
Sbjct: 797 -ADKVQFVIGVSN-ALTTLIKAGDIAKELSSHIDGKGGGRADMAQGGGNNSANIDQALSQ 854
Query: 689 ARDY 692
+
Sbjct: 855 VEKF 858
Score = 66.2 bits (160), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 22/128 (17%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRV+ +G + S+E CGGTH+A +G F ++
Sbjct: 630 GAEALFGEKYGDIVRVISMG----------------DFSIELCGGTHVAYTGDIGLFKVT 673
Query: 150 SEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTL--SNPNTADS-KALSKKII 206
SE +IA G+RRI A++ A KAI+ E +++ +K++L ++ N D K++ ++I
Sbjct: 674 SEGSIASGVRRIEAVT---ADKAIRHTFTNENKIIAIKDSLKANDTNLIDKIKSMLEQIK 730
Query: 207 DITEEIAK 214
+ ++IAK
Sbjct: 731 NQEKQIAK 738
>sp|P61700|SYA_DESVH Alanine--tRNA ligase OS=Desulfovibrio vulgaris (strain
Hildenborough / ATCC 29579 / NCIMB 8303) GN=alaS PE=3
SV=1
Length = 879
Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 161/358 (44%), Gaps = 55/358 (15%)
Query: 336 NHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEVIRIVQT 395
NHT TH+L+ ALR VLG Q GSLVAPDRLRFDFT+ MT +++ E EV R++
Sbjct: 569 NHTCTHLLHAALRRVLGDHVKQAGSLVAPDRLRFDFTHIAPMTPEELAAVEREVNRVIMA 628
Query: 396 KKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEF 455
P+ DA K +G A+F E Y D VRVV + + SVE
Sbjct: 629 DIPLETDHMHYDDAVK-RGAMALFGEKYGDEVRVVAIA----------------DESVEL 671
Query: 456 CGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTLS 515
CGGTHL G F I SE +A G+RRI AL+G A A+ AQ E L
Sbjct: 672 CGGTHLRATGQAGLFLIVSESGVAAGVRRIEALTGWNAMHAV-LAQRSEQAQL------- 723
Query: 516 NPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKAAHASKV 575
+A KA +I+ E + K +T++K ++ A + +
Sbjct: 724 ---SAMLKARPGEIVSRVESLQKEN-------------RTLRKDMERAAAQATSGQGRNI 767
Query: 576 LDRVKSLVEERKADKFIVEILDAG---SNTKALDAALKQVKTSAPHMAAMFISVDEAAKK 632
+D + V++L A N KAL + V++ A +VD K
Sbjct: 768 MDEATDVAG--------VKLLAAKVEVPNVKALRDLMDDVRSKLVSGIACLAAVD--GDK 817
Query: 633 IFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSKAR 690
+ + +V K+ + TA ++ + +GG GGG+ + AQA G N +K R
Sbjct: 818 VQLIIAVSKD-LQTRFTAPQLIKDVAAEVGGSGGGRPDMAQAGGTNPAGIDAAFAKLR 874
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 41/84 (48%), Gaps = 16/84 (19%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRVV + + SVE CGGTHL G F I
Sbjct: 646 GAMALFGEKYGDEVRVVAIA----------------DESVELCGGTHLRATGQAGLFLIV 689
Query: 150 SEEAIAKGIRRIVALSGNEATKAI 173
SE +A G+RRI AL+G A A+
Sbjct: 690 SESGVAAGVRRIEALTGWNAMHAV 713
>sp|A1VEQ6|SYA_DESVV Alanine--tRNA ligase OS=Desulfovibrio vulgaris subsp. vulgaris
(strain DP4) GN=alaS PE=3 SV=1
Length = 879
Score = 135 bits (341), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 161/358 (44%), Gaps = 55/358 (15%)
Query: 336 NHTATHILNHALRFVLGPEADQKGSLVAPDRLRFDFTNKGAMTADQVKKAEAEVIRIVQT 395
NHT TH+L+ ALR VLG Q GSLVAPDRLRFDFT+ MT +++ E EV R++
Sbjct: 569 NHTCTHLLHAALRRVLGDHVKQAGSLVAPDRLRFDFTHIAPMTPEELAAVEREVNRVIMA 628
Query: 396 KKPVYAKLCSLADAKKIKGLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEF 455
P+ DA K +G A+F E Y D VRVV + + SVE
Sbjct: 629 DIPLETDHMHYDDAVK-RGAMALFGEKYGDEVRVVAIA----------------DESVEL 671
Query: 456 CGGTHLAMAHHVGDFCISSEEAIAKGIRRIVALSGNEATKAIKKAQVIETEVLNVKNTLS 515
CGGTHL G F I SE +A G+RRI AL+G A A+ AQ E L
Sbjct: 672 CGGTHLRATGQAGLFLIVSESGVAAGVRRIEALTGWNAMHAV-LAQRSEQAQL------- 723
Query: 516 NPNTADSKALSKKIIDITEEIAKATLPYWKKEDLRNLLKTMKKSLDEAERLQKAAHASKV 575
+A KA +I+ E + K +T++K ++ A + +
Sbjct: 724 ---SAMLKARPGEIVSRVESLQKEN-------------RTLRKDMERAAAQATSGQGRNI 767
Query: 576 LDRVKSLVEERKADKFIVEILDAG---SNTKALDAALKQVKTSAPHMAAMFISVDEAAKK 632
+D + V++L A N KAL + V++ A +VD K
Sbjct: 768 MDEATDVAG--------VKLLAAKVEVPNVKALRDLMDDVRSKLVSGIACLAAVD--GDK 817
Query: 633 IFCLSSVPKEAVSAGLTAIDWVRYLTDIMGGKGGGKAESAQASGPNYENAPLVLSKAR 690
+ + +V K+ + TA ++ + +GG GGG+ + AQA G N +K R
Sbjct: 818 VQLIIAVSKD-LQTRFTAPQLIKDVAAEVGGSGGGRPDMAQAGGTNPAGIDAAFAKLR 874
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 41/84 (48%), Gaps = 16/84 (19%)
Query: 90 GLRAMFDETYPDPVRVVCVGTPVEQLESEPESQAGMETSVEFCGGTHLAMAHHVGDFCIS 149
G A+F E Y D VRVV + + SVE CGGTHL G F I
Sbjct: 646 GAMALFGEKYGDEVRVVAIA----------------DESVELCGGTHLRATGQAGLFLIV 689
Query: 150 SEEAIAKGIRRIVALSGNEATKAI 173
SE +A G+RRI AL+G A A+
Sbjct: 690 SESGVAAGVRRIEALTGWNAMHAV 713
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 244,701,645
Number of Sequences: 539616
Number of extensions: 10096595
Number of successful extensions: 41938
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 101
Number of HSP's that attempted gapping in prelim test: 37604
Number of HSP's gapped (non-prelim): 1980
length of query: 699
length of database: 191,569,459
effective HSP length: 125
effective length of query: 574
effective length of database: 124,117,459
effective search space: 71243421466
effective search space used: 71243421466
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)