RPS-BLAST 2.2.26 [Sep-21-2011]

Database: pdb70 
           27,921 sequences; 6,701,793 total letters

Searching..................................................done

Query= psy6232
         (100 letters)



>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase;
           transferase; 3.10A {Arabidospis thaliana}
          Length = 979

 Score = 25.4 bits (56), Expect = 4.5
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 3   GLRNDDPCFFQNSIPDYLFFVSPS 26
           G    D C +Q+   DY F V+ S
Sbjct: 610 GTATPDHCVYQSDYADYYFKVTKS 633


  Database: pdb70
    Posted date:  Sep 4, 2012  3:40 AM
  Number of letters in database: 6,701,793
  Number of sequences in database:  27,921
  
Lambda     K      H
   0.328    0.141    0.490 

Gapped
Lambda     K      H
   0.267   0.0720    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,567,690
Number of extensions: 75869
Number of successful extensions: 143
Number of sequences better than 10.0: 1
Number of HSP's gapped: 143
Number of HSP's successfully gapped: 4
Length of query: 100
Length of database: 6,701,793
Length adjustment: 66
Effective length of query: 34
Effective length of database: 4,859,007
Effective search space: 165206238
Effective search space used: 165206238
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 51 (23.4 bits)