Query psy6234
Match_columns 260
No_of_seqs 154 out of 544
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 21:13:17 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6234.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6234hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ut1_A Lethal(3)malignant brai 100.0 1.6E-80 5.4E-85 565.3 23.5 230 3-259 32-270 (324)
2 1oz2_A Lethal(3)malignant brai 100.0 3.7E-79 1.3E-83 558.4 23.8 230 3-259 37-275 (331)
3 3h6z_A Polycomb protein SFMBT; 100.0 3E-79 1E-83 576.9 17.9 254 3-260 32-291 (447)
4 3feo_A MBT domain-containing p 100.0 3.4E-76 1.1E-80 555.7 23.0 240 1-260 36-278 (437)
5 3f70_A Lethal(3)malignant brai 100.0 4.6E-76 1.6E-80 556.4 22.0 243 1-260 34-282 (456)
6 3feo_A MBT domain-containing p 100.0 4.6E-72 1.6E-76 527.5 20.7 220 6-260 154-386 (437)
7 3f70_A Lethal(3)malignant brai 100.0 8.2E-71 2.8E-75 520.6 21.7 226 6-260 152-390 (456)
8 3h6z_A Polycomb protein SFMBT; 100.0 7.2E-70 2.5E-74 513.0 17.2 229 4-260 153-400 (447)
9 2biv_A SCML2 protein, sex COMB 100.0 5.9E-66 2E-70 452.2 21.3 181 4-196 59-242 (243)
10 2r58_A Polycomb protein SCM; M 100.0 1.5E-64 5.1E-69 447.5 21.5 185 4-200 31-218 (265)
11 3ut1_A Lethal(3)malignant brai 100.0 2E-61 6.7E-66 439.7 19.3 178 5-199 141-321 (324)
12 1oz2_A Lethal(3)malignant brai 100.0 6.8E-61 2.3E-65 437.8 20.1 179 5-200 146-327 (331)
13 2biv_A SCML2 protein, sex COMB 100.0 3.9E-55 1.3E-59 383.6 17.4 181 69-260 6-195 (243)
14 2r58_A Polycomb protein SCM; M 100.0 1.5E-47 5.2E-52 338.7 17.5 156 94-260 3-167 (265)
15 1wjr_A KIAA1617 protein; MBT d 100.0 2.3E-39 7.7E-44 257.2 8.0 115 4-128 8-126 (127)
16 1wjq_A KIAA1798 protein; MBT d 100.0 2.6E-32 8.9E-37 209.5 9.1 86 113-201 2-89 (107)
17 1wjr_A KIAA1617 protein; MBT d 100.0 1.7E-31 5.7E-36 212.0 6.0 105 123-237 7-126 (127)
18 1wjq_A KIAA1798 protein; MBT d 100.0 2.7E-29 9.1E-34 192.8 8.4 77 6-94 12-88 (107)
19 2eqm_A PHD finger protein 20-l 99.9 2.1E-22 7.3E-27 149.8 7.0 72 122-193 14-87 (88)
20 2eqm_A PHD finger protein 20-l 99.8 3.4E-20 1.2E-24 137.9 7.6 70 6-87 18-87 (88)
21 3sd4_A PHD finger protein 20; 99.8 7.6E-20 2.6E-24 130.3 7.2 57 123-181 8-68 (69)
22 3sd4_A PHD finger protein 20; 99.7 5.8E-18 2E-22 120.5 7.1 57 5-75 10-68 (69)
23 3h8z_A FragIle X mental retard 97.6 0.0014 4.8E-08 51.3 12.7 104 10-174 4-112 (128)
24 3h8z_A FragIle X mental retard 97.0 0.0016 5.5E-08 51.0 7.1 59 7-76 60-118 (128)
25 3dlm_A Histone-lysine N-methyl 96.1 0.11 3.8E-06 43.7 12.9 139 5-181 66-209 (213)
26 2eko_A Histone acetyltransfera 95.2 0.033 1.1E-06 40.6 5.4 59 125-183 7-73 (87)
27 2f5k_A MORF-related gene 15 is 94.3 0.092 3.2E-06 39.3 5.9 47 125-174 20-72 (102)
28 2lcc_A AT-rich interactive dom 94.1 0.087 3E-06 37.3 5.1 51 126-176 4-61 (76)
29 2eko_A Histone acetyltransfera 92.8 0.31 1E-05 35.4 6.5 67 5-81 7-77 (87)
30 1wgs_A MYST histone acetyltran 91.7 0.46 1.6E-05 37.2 6.7 53 125-179 10-70 (133)
31 2ro0_A Histone acetyltransfera 91.5 0.72 2.5E-05 33.7 7.2 51 125-178 21-77 (92)
32 3p8d_A Medulloblastoma antigen 91.4 0.53 1.8E-05 32.4 5.9 37 126-164 5-42 (67)
33 3qii_A PHD finger protein 20; 91.3 0.47 1.6E-05 34.2 5.8 38 125-164 19-57 (85)
34 4hcz_A PHD finger protein 1; p 90.8 1.3 4.6E-05 29.4 7.2 45 126-173 2-48 (58)
35 3m9q_A Protein MALE-specific l 90.6 0.55 1.9E-05 35.0 5.8 50 125-174 17-79 (101)
36 2f5k_A MORF-related gene 15 is 90.4 0.55 1.9E-05 35.0 5.7 47 6-67 21-71 (102)
37 2lcc_A AT-rich interactive dom 90.0 0.59 2E-05 32.9 5.3 55 5-70 3-61 (76)
38 2xk0_A Polycomb protein PCL; t 89.8 2.1 7.3E-05 29.3 7.7 47 124-173 12-58 (69)
39 2rnz_A Histone acetyltransfera 89.7 1.7 5.7E-05 31.9 7.7 50 126-178 24-79 (94)
40 2ro0_A Histone acetyltransfera 89.7 1.5 5E-05 32.1 7.4 53 5-72 21-77 (92)
41 3oa6_A MALE-specific lethal 3 89.3 0.87 3E-05 34.4 6.0 51 124-174 16-79 (110)
42 1wgs_A MYST histone acetyltran 88.3 1.2 4E-05 34.8 6.4 53 6-72 11-69 (133)
43 2lrq_A Protein MRG15, NUA4 com 87.9 0.094 3.2E-06 37.9 0.0 47 125-174 10-62 (85)
44 2equ_A PHD finger protein 20-l 88.0 1.2 4.2E-05 31.1 5.8 38 125-164 7-45 (74)
45 3m9q_A Protein MALE-specific l 86.7 2.3 7.7E-05 31.6 6.9 55 3-67 15-78 (101)
46 2e5q_A PHD finger protein 19; 85.9 1.6 5.5E-05 29.4 5.1 46 125-173 5-52 (63)
47 2rnz_A Histone acetyltransfera 85.7 2.9 9.9E-05 30.6 6.9 53 5-72 23-79 (94)
48 4hcz_A PHD finger protein 1; p 85.3 4.4 0.00015 26.9 6.9 45 7-68 3-49 (58)
49 2m0o_A PHD finger protein 1; t 84.0 3.2 0.00011 29.1 6.1 47 125-174 24-72 (79)
50 2kfw_A FKBP-type peptidyl-prol 83.5 2.1 7.3E-05 35.4 6.1 34 127-163 89-122 (196)
51 2e5p_A Protein PHF1, PHD finge 83.5 3.5 0.00012 28.1 5.9 46 125-173 7-54 (68)
52 2xk0_A Polycomb protein PCL; t 83.1 4.5 0.00015 27.7 6.4 46 6-68 14-59 (69)
53 3oa6_A MALE-specific lethal 3 82.8 3.2 0.00011 31.2 6.2 52 7-68 19-79 (110)
54 4dt4_A FKBP-type 16 kDa peptid 82.8 4 0.00014 32.9 7.3 34 127-162 112-145 (169)
55 2k8i_A SLYD, peptidyl-prolyl C 82.6 2.9 0.0001 33.8 6.5 33 127-162 89-121 (171)
56 3dlm_A Histone-lysine N-methyl 80.8 5.1 0.00017 33.6 7.3 52 7-75 158-209 (213)
57 3m9p_A MALE-specific lethal 3 80.3 4.2 0.00014 30.6 6.1 49 125-173 17-78 (110)
58 2eqj_A Metal-response element- 79.9 6.9 0.00024 26.6 6.4 46 125-173 11-58 (66)
59 2lrq_A Protein MRG15, NUA4 com 80.4 0.39 1.3E-05 34.6 0.0 47 6-67 11-61 (85)
60 2m0o_A PHD finger protein 1; t 78.3 5 0.00017 28.1 5.4 45 7-68 26-72 (79)
61 2e5q_A PHD finger protein 19; 76.7 6.8 0.00023 26.3 5.5 46 6-68 6-53 (63)
62 3m9p_A MALE-specific lethal 3 76.3 7.1 0.00024 29.3 6.3 51 6-66 18-77 (110)
63 2jz2_A SSL0352 protein; SH3-li 75.1 14 0.00046 24.9 6.7 46 128-173 2-47 (66)
64 1g5v_A SurviVal motor neuron p 70.2 13 0.00045 26.6 6.3 40 124-164 7-48 (88)
65 4a4f_A SurviVal of motor neuro 69.4 19 0.00065 23.8 6.6 40 124-164 5-46 (64)
66 1mhn_A SurviVal motor neuron p 69.0 17 0.00058 23.6 6.2 38 126-164 2-41 (59)
67 2k3y_A Chromatin modification- 67.6 10 0.00035 29.6 5.6 27 125-154 7-33 (136)
68 2e5p_A Protein PHF1, PHD finge 66.7 27 0.00093 23.7 6.9 52 6-76 8-61 (68)
69 2k3y_A Chromatin modification- 64.8 17 0.00059 28.2 6.4 31 1-44 3-33 (136)
70 1qp2_A Protein (PSAE protein); 60.3 6.6 0.00023 27.0 2.8 35 8-55 2-43 (70)
71 2ldm_A Uncharacterized protein 61.3 2.3 7.9E-05 30.3 0.0 37 126-164 5-42 (81)
72 3e9g_A Chromatin modification- 55.6 37 0.0013 26.1 6.6 31 1-44 1-31 (130)
73 3e9g_A Chromatin modification- 55.3 27 0.00092 26.9 5.8 26 126-154 6-31 (130)
74 2eqj_A Metal-response element- 54.3 48 0.0016 22.4 6.6 45 7-68 13-59 (66)
75 2equ_A PHD finger protein 20-l 54.2 30 0.001 23.9 5.5 38 6-55 8-46 (74)
76 3s6w_A Tudor domain-containing 51.2 37 0.0013 21.4 5.3 37 127-164 1-39 (54)
77 2bud_A Males-absent on the fir 48.7 73 0.0025 23.0 7.3 35 33-69 28-69 (92)
78 3cgm_A SLYD, peptidyl-prolyl C 48.1 29 0.001 27.3 5.3 35 127-163 84-118 (158)
79 3mea_A SAGA-associated factor 47.8 34 0.0012 27.8 5.7 39 126-165 115-156 (180)
80 2kr7_A FKBP-type peptidyl-prol 45.5 40 0.0014 26.2 5.7 35 127-163 93-127 (151)
81 2jz2_A SSL0352 protein; SH3-li 45.2 39 0.0013 22.7 4.6 38 8-55 2-39 (66)
82 1g5v_A SurviVal motor neuron p 45.1 67 0.0023 22.8 6.3 41 6-57 9-51 (88)
83 1ix5_A FKBP; ppiase, isomerase 40.9 19 0.00067 28.0 3.2 30 127-163 103-132 (151)
84 1mhn_A SurviVal motor neuron p 40.3 72 0.0024 20.4 6.5 40 6-56 2-43 (59)
85 3qii_A PHD finger protein 20; 39.3 85 0.0029 22.2 6.0 37 6-54 20-57 (85)
86 2bud_A Males-absent on the fir 36.2 69 0.0024 23.1 5.2 43 131-175 18-69 (92)
87 3p8d_A Medulloblastoma antigen 35.2 1E+02 0.0035 20.8 6.0 37 6-54 5-42 (67)
88 2d9t_A Tudor domain-containing 34.6 1.1E+02 0.0037 20.9 6.2 39 125-164 7-47 (78)
89 4dt4_A FKBP-type 16 kDa peptid 32.6 79 0.0027 25.2 5.6 34 7-52 112-145 (169)
90 3pr9_A FKBP-type peptidyl-prol 30.5 45 0.0015 26.2 3.8 28 128-162 103-130 (157)
91 2lcd_A AT-rich interactive dom 36.5 11 0.00037 28.5 0.0 38 125-164 54-92 (118)
92 4a4f_A SurviVal of motor neuro 30.4 1.1E+02 0.0039 19.8 6.3 39 7-56 8-48 (64)
93 3cgm_A SLYD, peptidyl-prolyl C 29.2 1E+02 0.0034 24.1 5.6 34 7-52 84-117 (158)
94 3mea_A SAGA-associated factor 28.3 1.3E+02 0.0045 24.3 6.2 41 5-56 114-157 (180)
95 4he6_A Peptidase family U32; u 28.2 34 0.0012 23.9 2.4 18 124-141 26-43 (89)
96 2l1t_A Uncharacterized protein 26.6 99 0.0034 23.0 4.7 39 125-163 10-50 (109)
97 2kr7_A FKBP-type peptidyl-prol 25.9 1.4E+02 0.0048 22.9 5.9 34 7-52 93-126 (151)
98 2e6z_A Transcription elongatio 24.6 1.1E+02 0.0036 19.8 4.2 37 125-163 5-41 (59)
99 2fhd_A RAD9 homolog, DNA repai 24.4 82 0.0028 24.8 4.1 25 140-164 18-48 (153)
100 3pnw_C Tudor domain-containing 23.5 1.8E+02 0.0061 19.8 5.7 39 125-164 15-55 (77)
101 2d9t_A Tudor domain-containing 22.8 1.8E+02 0.0063 19.7 6.1 39 7-56 9-49 (78)
102 2b9s_B DNA topoisomerase I-lik 22.6 15 0.00053 24.5 -0.3 19 173-192 22-40 (62)
103 2k8i_A SLYD, peptidyl-prolyl C 22.5 1.1E+02 0.0037 24.3 4.7 33 7-52 89-121 (171)
104 1jb0_E Photosystem 1 reaction 21.9 39 0.0013 23.3 1.6 34 8-54 1-42 (75)
105 4fu6_A PC4 and SFRS1-interacti 20.1 1.1E+02 0.0037 23.7 4.1 52 6-75 21-79 (153)
106 1ri0_A Hepatoma-derived growth 20.1 2.1E+02 0.007 20.9 5.5 54 5-76 17-77 (110)
No 1
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=100.00 E-value=1.6e-80 Score=565.27 Aligned_cols=230 Identities=32% Similarity=0.578 Sum_probs=207.1
Q ss_pred ccccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEEcccCCCCCCCeeeeCCCCCeecccchhccC
Q psy6234 3 DCWENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRYEGFGEDSSKDFWVNLCSSMVHPVGWCATRG 82 (260)
Q Consensus 3 ~~~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvGw~~~~g 82 (260)
..++.|++|||||++|+ .||+.||||||++|+|+||+|||||++ +++|||||++|++|||||||++||
T Consensus 32 ~~~~~F~~GMKLE~~D~----------~~~~~~~vAtV~~v~G~rl~l~~dg~~--~~~dFW~~~~S~~IhPvGwc~~~g 99 (324)
T 3ut1_A 32 YNKNGFKVGMKLEGVDP----------EHQSVYCVLTVAEVCGYRIKLHFDGYS--DCYDFWVNADALDIHPVGWCEKTG 99 (324)
T ss_dssp SSCCCCCTTCEEEEEET----------TEEEEEEEEEEEEEETTEEEEEETTSC--GGGCEEEETTCSSEECTTHHHHHT
T ss_pred CcCCcccCCCEEEEecC----------CCCCcEEEEEEEEEECCEEEEEECCCC--CCCCEEEeCCCCCeeccchhHhcC
Confidence 45799999999999987 378899999999999999999999996 478999999999999999999999
Q ss_pred CCCCCCCCCCCCcCcHHHHHHHHhcCCCCCCcccccccc-ccccCCCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEE
Q psy6234 83 KPLIPPRTIETKYSDWKDFLVKRLTGARTLPSNFYHKVQ-ESVKSRFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVH 161 (260)
Q Consensus 83 ~~L~pP~~~~~~~~~W~~~L~~~~~~~~~~P~~~f~~~~-~~~~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~ 161 (260)
+.|+||++|+.+.|+|.+||++ +++.+||.++|+..+ ....+.|++||||||+|++|+.+||||||++|+|+|++|+
T Consensus 100 ~~L~pP~g~~~~~f~W~~yL~~--~~a~~aP~~lF~~~~~~~~~~~F~vGMKLEavDp~~p~~icvATV~~V~g~~l~v~ 177 (324)
T 3ut1_A 100 HKLHPPKGYKEEEFNWQTYLKT--CKAQAAPKSLFENQNITVIPSGFRVGMKLEAVDKKNPSFICVATVTDMVDNRFLVH 177 (324)
T ss_dssp CCEECCTTCCTTTCCHHHHHHH--TTCCBCCGGGCTTTTCCCCCCSCCTTCEEEEEETTEEEEEEEEEEEEEETTEEEEE
T ss_pred eeccCCCCCcCCCCCHHHHHHH--hCcccCChHHcccCCCccCccccccCCEEEEecCCCCCcEEEEEEEEEECCEEEEE
Confidence 9999999999999999999987 799999999998643 3346899999999999999999999999999999999999
Q ss_pred Eec--CCCCEEEEcCCCCceechhhhhcCCcccCCCCCcc-ccccc-c----CCCCCCccccCCCCCCCcCCCCCCCCCC
Q psy6234 162 YYD--DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTD-RCAKG-I----RDRDDATEDLFPLSVGTAGTKLSPGTGQ 233 (260)
Q Consensus 162 ~~~--~~~~~w~~~~S~~I~PvGw~~~~g~~L~pP~~y~~-~~~~~-~----~~~~~a~~~~f~~~~~~~~~~~~~~~~~ 233 (260)
||| +.+|||||++|++|||||||++||++|+||+||.. ..+.| . .+..+||.++|+. .+
T Consensus 178 ~Dg~~~~~d~w~~~~Sp~I~PVGWCe~~g~~L~pP~gy~~~~~f~W~~YL~~t~a~aaP~~~F~~-------------~~ 244 (324)
T 3ut1_A 178 FDNWDESYDYWCEASSPHIHPVGWCKEHRRTLITPPGYPNVKHFSWDKYLEETNSLPAPARAFKV-------------KP 244 (324)
T ss_dssp ETTSCGGGCEEECTTCTTEECTTHHHHTTCCEECCTTC--CCSCCHHHHHHHTTCCBCCGGGCCC-------------CC
T ss_pred ECCCCCcCCEEEECCCCCcccCcHHHhcCCCCCCCCCCCCCCcccHHHHHHhhCCCCCCHHHhcc-------------cc
Confidence 999 67899999999999999999999999999999985 33332 2 2456788888863 35
Q ss_pred CCCCCCCCEEEEecCCCCCCceeeee
Q psy6234 234 TGGFVVGMKLESVDPLNLSDIWKRQQ 259 (260)
Q Consensus 234 ~~~F~~GMKLEaVDp~~p~~IcvATv 259 (260)
.|+|++||||||||++||.+||||||
T Consensus 245 ~~~F~~gmkLEAvD~~~p~licvATV 270 (324)
T 3ut1_A 245 PHGFQKKMKLEVVDKRNPMFIRVATV 270 (324)
T ss_dssp CCCCCTTCEEEEECSSSTTCEEEEEE
T ss_pred cccCCCCCeeeccCCCCCCceeEEEE
Confidence 69999999999999999999999998
No 2
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=100.00 E-value=3.7e-79 Score=558.42 Aligned_cols=230 Identities=30% Similarity=0.568 Sum_probs=208.1
Q ss_pred ccccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEEcccCCCCCCCeeeeCCCCCeecccchhccC
Q psy6234 3 DCWENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRYEGFGEDSSKDFWVNLCSSMVHPVGWCATRG 82 (260)
Q Consensus 3 ~~~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvGw~~~~g 82 (260)
..++.|++|||||++|+ .||+++|||||++|||+||+|||||++ +++|||||++|++|||||||+++|
T Consensus 37 ~~~~~f~~GmklE~~D~----------~~~~~~~vAtV~~v~G~rl~l~~dg~~--~~~dFW~~~~S~~IhPvGwc~~~g 104 (331)
T 1oz2_A 37 HNKNGFKLGMKLEGIDP----------QHPSMYFILTVAEVCGYRLRLHFDGYS--ECHDFWVNANSPDIHPAGWFEKTG 104 (331)
T ss_dssp CSCCCCCTTCEEEEEET----------TEEEEEEEEEEEEEETTEEEEEETTSC--GGGCEEEETTCTTEECTTHHHHHT
T ss_pred CCccccCCCCEEEEEeC----------CCCCcEEEEEEEEecCCEEEEEECCCC--CCCCEEEcCCCCCcccCchHHhcC
Confidence 34789999999999987 378999999999999999999999996 478999999999999999999999
Q ss_pred CCCCCCCCCCCCcCcHHHHHHHHhcCCCCCCcccccccc-ccccCCCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEE
Q psy6234 83 KPLIPPRTIETKYSDWKDFLVKRLTGARTLPSNFYHKVQ-ESVKSRFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVH 161 (260)
Q Consensus 83 ~~L~pP~~~~~~~~~W~~~L~~~~~~~~~~P~~~f~~~~-~~~~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~ 161 (260)
+.|+||.+|..+.|+|.+||++ +++.+||.++|+... ....++|++||||||+|++|+.+||||||++|+|+|++|+
T Consensus 105 ~~L~pP~~~~~~~f~W~~yL~~--t~a~~aP~~lF~~~~~~~~~~~F~vGmKLEavD~~np~~icvATV~~v~g~r~~v~ 182 (331)
T 1oz2_A 105 HKLQPPKGYKEEEFSWSQYLRS--TRAQAAPKHLFVSQSHSPPPLGFQVGMKLEAVDRMNPSLVCVASVTDVVDSRFLVH 182 (331)
T ss_dssp CCEECCTTCCGGGCCHHHHHHH--HTCCBCCGGGCSCSSCSCCCTTCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEE
T ss_pred CcccCccccccccCcHHHHHHh--cCCCCCChHHhcccCCCCCccccccccEEEeccCCCCCcEEEEEEEEeeCCEEEEE
Confidence 9999999999999999999986 799999999998643 3457899999999999999999999999999999999999
Q ss_pred Eec--CCCCEEEEcCCCCceechhhhhcCCcccCCCCCcc-ccccc-c----CCCCCCccccCCCCCCCcCCCCCCCCCC
Q psy6234 162 YYD--DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTD-RCAKG-I----RDRDDATEDLFPLSVGTAGTKLSPGTGQ 233 (260)
Q Consensus 162 ~~~--~~~~~w~~~~S~~I~PvGw~~~~g~~L~pP~~y~~-~~~~~-~----~~~~~a~~~~f~~~~~~~~~~~~~~~~~ 233 (260)
||| +.+|||||++|++|||||||++||++|+||.||.. ..+.| . .++.+||.++|+. .+
T Consensus 183 ~Dg~~~~~D~w~~~~S~~I~PVGwc~~~g~~L~pP~gy~~~~~f~W~~yL~~~ga~~aP~~~F~~-------------~~ 249 (331)
T 1oz2_A 183 FDNWDDTYDYWCDPSSPYIHPVGWCQKQGKPLTPPQDYPDPDNFCWEKYLEETGASAVPTWAFKV-------------RP 249 (331)
T ss_dssp ETTSCGGGCEEECTTCTTEECTTHHHHHTCCEECSTTCSSGGGCCHHHHHHHHTCCBCCGGGCCC-------------CC
T ss_pred eCCCCCccCEEEecCCCCccCCchHHhcCCCCCCCCCCCcCCcccHHHHHHhcCCCcCCHHHccc-------------cc
Confidence 999 67899999999999999999999999999999974 22322 2 2456788888864 24
Q ss_pred CCCCCCCCEEEEecCCCCCCceeeee
Q psy6234 234 TGGFVVGMKLESVDPLNLSDIWKRQQ 259 (260)
Q Consensus 234 ~~~F~~GMKLEaVDp~~p~~IcvATv 259 (260)
.|+|++||||||||++||.+||||||
T Consensus 250 ~~~F~~gmKLEavD~~~p~~ic~AtV 275 (331)
T 1oz2_A 250 PHSFLVNMKLEAVDRRNPALIRVASV 275 (331)
T ss_dssp CCCCCTTCEEEEECSSSTTCEEEEEE
T ss_pred ccccccCceeEeecccCCCcEEeeEE
Confidence 69999999999999999999999999
No 3
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=100.00 E-value=3e-79 Score=576.93 Aligned_cols=254 Identities=60% Similarity=1.049 Sum_probs=215.9
Q ss_pred ccccCcccccEEEEEeCCCCCCCCC-CCCCCCcEEEEEEEEEeCCEEEEEEcccCCCCCCCeeeeCCCCCeecccchhcc
Q psy6234 3 DCWENISVGMKVEVENTDTDTPSGN-HDNYPDSFWVASVTQIAGYKALLRYEGFGEDSSKDFWVNLCSSMVHPVGWCATR 81 (260)
Q Consensus 3 ~~~~~~~~GmklEv~~~~~~~~~~~-~~~~p~~~wvA~V~~~~G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvGw~~~~ 81 (260)
++|++|++||||||+|++++.++.+ .+++|++||||||+++|||||||||+|+++| ++|||||++|++|||||||+++
T Consensus 32 ~~~~~~~~GMklEv~~~~~~~~~~~~~~~~p~~~WvAtV~~~~G~rLlLry~G~~~d-~~DFW~~~~S~~ihPvGWc~~~ 110 (447)
T 3h6z_A 32 EVWDNLGVGMKVEVENTDCDSIEVIQPGQTPTSFWVATILEIKGYKALMSYEGFDTD-SHDFWVNLCNAEVHSVGWCATR 110 (447)
T ss_dssp HHHTTCCTTCEEEEC----------------CCBEEEEEEEEETTEEEEEETTCSSG-GGCEEEETTTSSCBCTTHHHHH
T ss_pred cchhhcCCCCEEEEecCCcccccccccccCCCcEEEEEEhhhcccEEEEEEccCCCC-CCCccccCCCCceecCchHhhc
Confidence 5789999999999999877654422 2357899999999999999999999999754 5999999999999999999999
Q ss_pred CCCCCCCCCCCCCcCcHHHHHHHHhcCCCCCCccccccccccccCCCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEE
Q psy6234 82 GKPLIPPRTIETKYSDWKDFLVKRLTGARTLPSNFYHKVQESVKSRFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVH 161 (260)
Q Consensus 82 g~~L~pP~~~~~~~~~W~~~L~~~~~~~~~~P~~~f~~~~~~~~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~ 161 (260)
|+.|+||.+|++++++|++||+++++|+.++|.++|++...+..+.|++|||||++|++|+++||||||++|+|+|++|+
T Consensus 111 g~~L~PP~~i~~~~~dW~~~L~~~l~ga~~~P~~lf~~~~~~~~~~F~~GmkLE~vD~~~~~~i~vAtV~~v~g~rl~l~ 190 (447)
T 3h6z_A 111 GKPLIPPRTIEHKYKDWKDFLVGRLSGARTLPSNFYNKINDSLQSRFRLGLNLECVDKDRISQVRLATVTKIVGDRLFLR 190 (447)
T ss_dssp TCCBCCCGGGGGGCSCCHHHHHHHHTTCCCSCTTHHHHHHHHTSCSSCTTCEEEEECTTCTTEEEEEEEEEEETTEEEEE
T ss_pred CceecCCccccccccCHHHHHHHHhcCCcCCCHHHhhhcccccccccCCCCEEEEEcCCCCccEEEEEEEEEECCcEEEE
Confidence 99999999999999999999999999999999999998777778999999999999999999999999999999999999
Q ss_pred EecCCCCEEEEcCCCCceechhhhhcCCcccCCCCCcccccccc-----CCCCCCccccCCCCCCCcCCCCCCCCCCCCC
Q psy6234 162 YYDDDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGI-----RDRDDATEDLFPLSVGTAGTKLSPGTGQTGG 236 (260)
Q Consensus 162 ~~~~~~~~w~~~~S~~I~PvGw~~~~g~~L~pP~~y~~~~~~~~-----~~~~~a~~~~f~~~~~~~~~~~~~~~~~~~~ 236 (260)
|+|++++||||++||+|||||||++||++|+||++|.++...+. ....+||.++|+.+... .........|+
T Consensus 191 ~~d~~~dfwc~~~Sp~I~PVGW~~~~g~~L~pP~~y~~~~~~~~~~ll~~~~~~ap~~LF~~~~~~---~~~~~~~~~~~ 267 (447)
T 3h6z_A 191 YFDSDDGFWCHEDSPIIHPVGWATTVGHNLAAPQDYLERMLAGREAMIEVHEDDATIELFKMNFTF---DEYYSDGKTNS 267 (447)
T ss_dssp ETTCSCEEEEETTCTTEECTTHHHHHTCEEECCHHHHHHHHTTTTTCCCCCTTBCCGGGSCCSSCT---HHHHTSCCCCC
T ss_pred EECCCCCEEEeCCCCCccccchHHhcCccccCChhhhccchhHHHHHHhhcccCCCHHHccCcccc---ccccccccccc
Confidence 98888899999999999999999999999999999987654331 23467899999864211 00012457899
Q ss_pred CCCCCEEEEecCCCCCCceeeeeC
Q psy6234 237 FVVGMKLESVDPLNLSDIWKRQQH 260 (260)
Q Consensus 237 F~~GMKLEaVDp~~p~~IcvATv~ 260 (260)
|++|||||||||++|..||||||.
T Consensus 268 F~~GMKLEavDp~~~~~icvATV~ 291 (447)
T 3h6z_A 268 FVEGMKLEAVDPLNLSSICPATVM 291 (447)
T ss_dssp CCTTCEEEEEETTEEEEEEEEEEE
T ss_pred cccccEEEeeccCCCCcEEEEEEE
Confidence 999999999999999999999993
No 4
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens}
Probab=100.00 E-value=3.4e-76 Score=555.65 Aligned_cols=240 Identities=48% Similarity=0.904 Sum_probs=209.6
Q ss_pred CCccccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEEcccCCCCCCCeeeeCCCCCeecccchhc
Q psy6234 1 MSDCWENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRYEGFGEDSSKDFWVNLCSSMVHPVGWCAT 80 (260)
Q Consensus 1 ~~~~~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvGw~~~ 80 (260)
|+.+|+.|++||||||+|++...+ ...||||+|+++|||||||||+|+++|+++|||||++|++|||||||++
T Consensus 36 ~~~~~~~~~~GmklEv~~~~~~~~-------~~~yWvA~V~~~~G~rllLry~G~~~d~~~DFW~~~~s~~ihpvGwc~~ 108 (437)
T 3feo_A 36 MGTCWGDISENVRVEVPNTDCSLP-------TKVFWIAGIVKLAGYNALLRYEGFENDSGLDFWCNICGSDIHPVGWCAA 108 (437)
T ss_dssp TTTSCTTCCTTCEEEEECSCC-----------CCEEEEEEEEEETTEEEEEETTCTTCCTTCEEEETTSTTCEETTHHHH
T ss_pred ccccccccCCCCEEEEecCCCCCC-------cCceEEEEEeeecceEEEEEecccCCCCCCCcceeCCCccccccccHhh
Confidence 467899999999999999864311 2579999999999999999999999888999999999999999999999
Q ss_pred cCCCCCCCCCCCCCcCcHHHHHHHHhcCCCCCCccccccccccccCCCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEE
Q psy6234 81 RGKPLIPPRTIETKYSDWKDFLVKRLTGARTLPSNFYHKVQESVKSRFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQV 160 (260)
Q Consensus 81 ~g~~L~pP~~~~~~~~~W~~~L~~~~~~~~~~P~~~f~~~~~~~~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v 160 (260)
+|+.|+||.+|+++++||++||+++++|+.++|.++|++...+..+.|++|||||++|+.+++.+|||||++|+|+||+|
T Consensus 109 ~~~~l~PP~~i~~~~~~W~~yL~~~ltga~t~P~~~f~~~~~~~~~~F~~GmkLEv~d~~~~~~~~vAtV~~v~G~rl~L 188 (437)
T 3feo_A 109 SGKPLVPPRTIQHKYTNWKAFLVKRLTGAKTLPPDFSQKVSESMQYPFKPCMRVEVVDKRHLCRTRVAVVESVIGGRLRL 188 (437)
T ss_dssp HTCCBCCCGGGTTTCSCHHHHHHHHHTTCCCCCTTHHHHHHHHTCCSCCTTEEEEEEETTEEEEEEEEEEEEEETTEEEE
T ss_pred cCCEecCCcccccccccHHHHHHHHhhcCccCChhHhhccccccCCCCCCCCEEEEecCCCCcceEEEEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999887777889999999999999999999999999999999999
Q ss_pred EEec---CCCCEEEEcCCCCceechhhhhcCCcccCCCCCccccccccCCCCCCccccCCCCCCCcCCCCCCCCCCCCCC
Q psy6234 161 HYYD---DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGIRDRDDATEDLFPLSVGTAGTKLSPGTGQTGGF 237 (260)
Q Consensus 161 ~~~~---~~~~~w~~~~S~~I~PvGw~~~~g~~L~pP~~y~~~~~~~~~~~~~a~~~~f~~~~~~~~~~~~~~~~~~~~F 237 (260)
+|+| .++|||||++|++|||||||++||++|+||..|..... ..+||.++|++.... ....|.|
T Consensus 189 ry~g~~d~~~dFW~~~~S~~IhPvGWc~~~g~~L~pP~~~~~~~g-----a~~aP~~lF~~~~~~--------~~~~~~F 255 (437)
T 3feo_A 189 VYEESEDRTDDFWCHMHSPLIHHIGWSRSIGHRFKRSDITKKQDG-----HFDTPPHLFAKVKEV--------DQSGEWF 255 (437)
T ss_dssp EESSCSSTTCEEEEETTCTTEECTTHHHHHTCCBC---------C-----CEECCGGGSCCCCCC--------CCSSSCC
T ss_pred EEeCCCCCCCCeEEeCCCCCccccchHHhcCCcccCchhhhhccc-----ccCCCHHHhcccccc--------CCCcccc
Confidence 9998 35799999999999999999999999999977754322 246899999864321 3345789
Q ss_pred CCCCEEEEecCCCCCCceeeeeC
Q psy6234 238 VVGMKLESVDPLNLSDIWKRQQH 260 (260)
Q Consensus 238 ~~GMKLEaVDp~~p~~IcvATv~ 260 (260)
++|||||||||+||.+||||||.
T Consensus 256 ~~GMKLEavDp~~p~~icvATV~ 278 (437)
T 3feo_A 256 KEGMKLEAIDPLNLSTICVATIR 278 (437)
T ss_dssp CTTCEEEEEETTEEEEEEEEEEE
T ss_pred ccCCEEEEEcCCCCceEEEEEEE
Confidence 99999999999999999999993
No 5
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A
Probab=100.00 E-value=4.6e-76 Score=556.39 Aligned_cols=243 Identities=49% Similarity=0.834 Sum_probs=194.7
Q ss_pred CCccccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEEcccCCCCCCCeeeeCCCCCeecccchhc
Q psy6234 1 MSDCWENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRYEGFGEDSSKDFWVNLCSSMVHPVGWCAT 80 (260)
Q Consensus 1 ~~~~~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvGw~~~ 80 (260)
++.+|++|++||||||+|++... .++.||||||+++|||||||||+|+++|+++||||+++|++|||||||++
T Consensus 34 ~~~~~~~~~~GmklEv~d~~~~~-------~~~~~WvAtV~~~~G~rL~Lry~G~~~d~~~DFW~~~~s~~ihPvGWc~~ 106 (456)
T 3f70_A 34 LYDQWEDVMKGMKVEVLNSDAVL-------PSRVYWIASVIQTAGYRVLLRYEGFENDASHDFWCNLGTVDVHPIGWCAI 106 (456)
T ss_dssp TGGGGGGCCTTCEEEEECCSCCC---------CCEEEEEEEEEETTEEEEEETTCTTCCTTCEEEETTSTTEECTTHHHH
T ss_pred ccCccccccCCCEEEEecCCCCC-------CccceEEEEEeeecceeEEEEecccCCCCcCCcceeCCCCceeecccHHh
Confidence 35679999999999999875321 23679999999999999999999998888999999999999999999999
Q ss_pred cCCCCCCCCCCCCCcCcHHHHHHHHhcCCCCCCccccccccccccCCCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEE
Q psy6234 81 RGKPLIPPRTIETKYSDWKDFLVKRLTGARTLPSNFYHKVQESVKSRFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQV 160 (260)
Q Consensus 81 ~g~~L~pP~~~~~~~~~W~~~L~~~~~~~~~~P~~~f~~~~~~~~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v 160 (260)
+|+.|+||.+|+.++++|.+||+++++|+.++|.+||++...+..+.|++||||||+|+.+++.||||||++|+|+|++|
T Consensus 107 ~g~~L~PP~~i~~~~~~W~~~L~k~l~ga~~~P~~f~~~~~~~~~~~F~~GmkLE~vD~~~~~~~~vAtV~~v~g~rl~l 186 (456)
T 3f70_A 107 NSKILVPPRTIHAKFTDWKGYLMKRLVGSRTLPVDFHIKMVESMKYPFRQGMRLEVVDKSQVSRTRMAVVDTVIGGRLRL 186 (456)
T ss_dssp TTCCBCCCTTTGGGCSCHHHHHHHHHTTCCBCCTTHHHHHHHHTSCSSCTTCEEEEECTTCTTCEEEEEEEEEETTEEEE
T ss_pred cCcEecCCcccccCcccHHHHHHHHhccCccCCHHHhhccccccCCCCCCCCEEEEECCCCCcceEEEEEEEEECCEEEE
Confidence 99999999999999999999999999999999999998877777899999999999999999999999999999999999
Q ss_pred EEec--CCCCEEEEcCCCCceechhhhhcCCcccCCCCCccccc--cccCCCCCCccccCCCCCCCcCCCCCCCCCCCCC
Q psy6234 161 HYYD--DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCA--KGIRDRDDATEDLFPLSVGTAGTKLSPGTGQTGG 236 (260)
Q Consensus 161 ~~~~--~~~~~w~~~~S~~I~PvGw~~~~g~~L~pP~~y~~~~~--~~~~~~~~a~~~~f~~~~~~~~~~~~~~~~~~~~ 236 (260)
+|+| +.+|||||++||+|||||||++||++|+||..+..-.. .......++|.++|++.. ....|+
T Consensus 187 ~~~~~~~~~dfWc~~~Sp~IhPVGW~~~~G~~L~pP~~~~dw~~~~~~~~~~~~ap~~lF~~~~----------~~~~~~ 256 (456)
T 3f70_A 187 LYEDGDSDDDFWCHMWSPLIHPVGWSRRVGHGIKMSERRSDMAHHPTFRKIYCDAVPYLFKKVR----------AVYTEG 256 (456)
T ss_dssp EECC----CCEEEETTCTTEEETTHHHHHTC--------------------------------C----------EEECCS
T ss_pred EEcCCCCCCceEEeCCCCCeeccccHhhcCCccCCCccchhHHHHHHhhcccccCCHHHhcccc----------cccccc
Confidence 9998 67899999999999999999999999999974322100 001123568899997632 234555
Q ss_pred --CCCCCEEEEecCCCCCCceeeeeC
Q psy6234 237 --FVVGMKLESVDPLNLSDIWKRQQH 260 (260)
Q Consensus 237 --F~~GMKLEaVDp~~p~~IcvATv~ 260 (260)
|++|||||||||+|+..||||||.
T Consensus 257 ~~Fk~GMKLEavDP~~~~~icvATV~ 282 (456)
T 3f70_A 257 GWFEEGMKLEAIDPLNLGNICVATVC 282 (456)
T ss_dssp CCCCTTCEEEEEETTEEEEEEEEEEE
T ss_pred ccccCCCEEEEEcCCCCCcEEEEEEE
Confidence 999999999999999999999993
No 6
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens}
Probab=100.00 E-value=4.6e-72 Score=527.49 Aligned_cols=220 Identities=29% Similarity=0.409 Sum_probs=188.1
Q ss_pred cCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEEcccCCCCCCCeeeeCCCCCeecccchhccCCCC
Q psy6234 6 ENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRYEGFGEDSSKDFWVNLCSSMVHPVGWCATRGKPL 85 (260)
Q Consensus 6 ~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvGw~~~~g~~L 85 (260)
+.|++||||||+|++ +|+.+|||+|++|||+||+|||+|++ |+++|||||++|++|||||||+++|++|
T Consensus 154 ~~F~~GmkLEv~d~~----------~~~~~~vAtV~~v~G~rl~Lry~g~~-d~~~dFW~~~~S~~IhPvGWc~~~g~~L 222 (437)
T 3feo_A 154 YPFKPCMRVEVVDKR----------HLCRTRVAVVESVIGGRLRLVYEESE-DRTDDFWCHMHSPLIHHIGWSRSIGHRF 222 (437)
T ss_dssp CSCCTTEEEEEEETT----------EEEEEEEEEEEEEETTEEEEEESSCS-STTCEEEEETTCTTEECTTHHHHHTCCB
T ss_pred CCCCCCCEEEEecCC----------CCcceEEEEEEEEECCEEEEEEeCCC-CCCCCeEEeCCCCCccccchHHhcCCcc
Confidence 579999999999873 78899999999999999999999985 5688999999999999999999999999
Q ss_pred CCCCCCCCCcCcHHHHHHHHhcCCCCCCccccccccccc--cCCCCCCcEEEEecCCCCCceEEEEEEeEeC-CeEEEEE
Q psy6234 86 IPPRTIETKYSDWKDFLVKRLTGARTLPSNFYHKVQESV--KSRFRVDMNLEVVDKKRISQVKVATIEKIVG-KRLQVHY 162 (260)
Q Consensus 86 ~pP~~~~~~~~~W~~~L~~~~~~~~~~P~~~f~~~~~~~--~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g-~rl~v~~ 162 (260)
+||..++ +++|+.++|.++|++..... .+.|++||||||+||+|+++||||||++|+| +|++|+|
T Consensus 223 ~pP~~~~------------~~~ga~~aP~~lF~~~~~~~~~~~~F~~GMKLEavDp~~p~~icvATV~~v~~~g~l~l~~ 290 (437)
T 3feo_A 223 KRSDITK------------KQDGHFDTPPHLFAKVKEVDQSGEWFKEGMKLEAIDPLNLSTICVATIRKVLADGFLMIGI 290 (437)
T ss_dssp C---------------------CCEECCGGGSCCCCCCCCSSSCCCTTCEEEEEETTEEEEEEEEEEEEECGGGEEEEEE
T ss_pred cCchhhh------------hcccccCCCHHHhccccccCCCccccccCCEEEEEcCCCCceEEEEEEEEEccCCEEEEEe
Confidence 9996542 35789999999998765433 4669999999999999999999999999995 6888999
Q ss_pred ec----CCCCEEE-EcCCCCceechhhhhcCCcccCCCCCcccccccc-----CCCCCCccccCCCCCCCcCCCCCCCCC
Q psy6234 163 YD----DDDGFCC-HQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGI-----RDRDDATEDLFPLSVGTAGTKLSPGTG 232 (260)
Q Consensus 163 ~~----~~~~~w~-~~~S~~I~PvGw~~~~g~~L~pP~~y~~~~~~~~-----~~~~~a~~~~f~~~~~~~~~~~~~~~~ 232 (260)
|| +.+|||| |++||+|||||||++||++|+||+||....+.|. ....+||.++|++ ..
T Consensus 291 Dg~~~~~~~d~~~~h~~Sp~I~PVGwc~~ng~~L~pP~g~~~~~f~W~~yL~~t~~~~aP~~lF~~------------~~ 358 (437)
T 3feo_A 291 DGSEAADGSDWFCYHATSPSIFPVGFCEINMIELTPPRGYTKLPFKWFDYLRETGSIAAPVKLFNK------------DV 358 (437)
T ss_dssp TTCCC-CCTTCEEEETTCTTEECTTHHHHHTCCEECCTTCCSSSCCHHHHHHHHTCCBCCGGGGCC------------CC
T ss_pred CCCCCCCCCCeEEeeCCCCCcccchhHhhcCccccCCCCcccCcchHHHHHHhhCCccCCHHHcCC------------CC
Confidence 99 2359999 9999999999999999999999999988654332 2456788899975 34
Q ss_pred CCCCCCCCCEEEEecCCCCCCceeeeeC
Q psy6234 233 QTGGFVVGMKLESVDPLNLSDIWKRQQH 260 (260)
Q Consensus 233 ~~~~F~~GMKLEaVDp~~p~~IcvATv~ 260 (260)
+.|+|++|||||||||+||.+||||||.
T Consensus 359 ~~~~F~~GMKLEAvD~~np~~IcvATV~ 386 (437)
T 3feo_A 359 PNHGFRVGMKLEAVDLMEPRLICVATVT 386 (437)
T ss_dssp CCCCCCTTCEEEEECTTSTTCEEEEEEE
T ss_pred ccccCccCCEEEeecCCCCCcEEEEEEe
Confidence 6799999999999999999999999983
No 7
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A
Probab=100.00 E-value=8.2e-71 Score=520.57 Aligned_cols=226 Identities=25% Similarity=0.359 Sum_probs=168.7
Q ss_pred cCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEEcccCCCCCCCeeeeCCCCCeecccchhccCCCC
Q psy6234 6 ENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRYEGFGEDSSKDFWVNLCSSMVHPVGWCATRGKPL 85 (260)
Q Consensus 6 ~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvGw~~~~g~~L 85 (260)
+.|++|||||++|+. +|..+|||||.+|+|+|++|||+|++ +++|||||++|++|||||||+++|+.|
T Consensus 152 ~~F~~GmkLE~vD~~----------~~~~~~vAtV~~v~g~rl~l~~~~~~--~~~dfWc~~~Sp~IhPVGW~~~~G~~L 219 (456)
T 3f70_A 152 YPFRQGMRLEVVDKS----------QVSRTRMAVVDTVIGGRLRLLYEDGD--SDDDFWCHMWSPLIHPVGWSRRVGHGI 219 (456)
T ss_dssp CSSCTTCEEEEECTT----------CTTCEEEEEEEEEETTEEEEEECC------CCEEEETTCTTEEETTHHHHHTC--
T ss_pred CCCCCCCEEEEECCC----------CCcceEEEEEEEEECCEEEEEEcCCC--CCCceEEeCCCCCeeccccHhhcCCcc
Confidence 469999999999873 78999999999999999999999985 578999999999999999999999999
Q ss_pred CCCCCCCCCcCcHHHHHHHHhcCCCCCCccccccccccccCC--CCCCcEEEEecCCCCCceEEEEEEeEe-CCeEEEEE
Q psy6234 86 IPPRTIETKYSDWKDFLVKRLTGARTLPSNFYHKVQESVKSR--FRVDMNLEVVDKKRISQVKVATIEKIV-GKRLQVHY 162 (260)
Q Consensus 86 ~pP~~~~~~~~~W~~~L~~~~~~~~~~P~~~f~~~~~~~~~~--F~vGmkLEavD~~~~~~i~vAtV~~v~-g~rl~v~~ 162 (260)
+||. ..++|.+++++ .+++.++|.++|++......+. |++||||||+||++++.||||||++|+ |++++|+|
T Consensus 220 ~pP~----~~~dw~~~~~~-~~~~~~ap~~lF~~~~~~~~~~~~Fk~GMKLEavDP~~~~~icvATV~~V~~~~~l~l~~ 294 (456)
T 3f70_A 220 KMSE----RRSDMAHHPTF-RKIYCDAVPYLFKKVRAVYTEGGWFEEGMKLEAIDPLNLGNICVATVCKVLLDGYLMICV 294 (456)
T ss_dssp -----------------------------------CEEECCSCCCCTTCEEEEEETTEEEEEEEEEEEEECSTTEEEEEE
T ss_pred CCCc----cchhHHHHHHh-hcccccCCHHHhccccccccccccccCCCEEEEEcCCCCCcEEEEEEEEEecCCEEEEEe
Confidence 9997 45889988865 4788999999999876666776 999999999999999999999999999 67888999
Q ss_pred ec-C---CC-CEEEEcCCCCceechhhhhcCCcccCCCCCcccccccc-C----CCCCCccccCCCCCCCcCCCCCCCCC
Q psy6234 163 YD-D---DD-GFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGI-R----DRDDATEDLFPLSVGTAGTKLSPGTG 232 (260)
Q Consensus 163 ~~-~---~~-~~w~~~~S~~I~PvGw~~~~g~~L~pP~~y~~~~~~~~-~----~~~~a~~~~f~~~~~~~~~~~~~~~~ 232 (260)
|| + .+ +||||++|++|||||||++||++|+||+||..+.+.|. | +..+||.++|+. ..
T Consensus 295 Dg~~~~~~~d~f~~h~~Sp~I~PVGwce~ng~~L~pP~gy~~~~f~W~~yL~~~~~~~aP~~lF~~------------~~ 362 (456)
T 3f70_A 295 DGGPSTDGLDWFCYHASSHAIFPATFCQKNDIELTPPKGYEAQTFNWENYLEKTKSKAAPSRLFNM------------DC 362 (456)
T ss_dssp C--------CCEEEETTCTTEECTTHHHHTTCCEECCTTCCSSSCCHHHHHHHHTCCBCCGGGSCC------------CC
T ss_pred cCCCccCCCCcEEEeCCCCCccccchHHHcCccccCCcccccccccHHHHHHhhCCccCCHHHhCc------------CC
Confidence 98 1 23 49999999999999999999999999999998655432 2 457888899975 33
Q ss_pred CCCCCCCCCEEEEecCCCCCCceeeeeC
Q psy6234 233 QTGGFVVGMKLESVDPLNLSDIWKRQQH 260 (260)
Q Consensus 233 ~~~~F~~GMKLEaVDp~~p~~IcvATv~ 260 (260)
+.|+|++|||||||||+||.+||||||.
T Consensus 363 ~~~~F~~GMKLEAvD~~np~~icvATV~ 390 (456)
T 3f70_A 363 PNHGFKVGMKLEAVDLMEPRLICVATVK 390 (456)
T ss_dssp CCCCCCTTCEEEEECTTSTTCEEEEEEE
T ss_pred CccccccCCEEEeecCCCCCcEEEEEEE
Confidence 5689999999999999999999999983
No 8
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=100.00 E-value=7.2e-70 Score=513.03 Aligned_cols=229 Identities=23% Similarity=0.375 Sum_probs=198.5
Q ss_pred cccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEEcccCCCCCCCeeeeCCCCCeecccchhccCC
Q psy6234 4 CWENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRYEGFGEDSSKDFWVNLCSSMVHPVGWCATRGK 83 (260)
Q Consensus 4 ~~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvGw~~~~g~ 83 (260)
..+.|++|||||++|+ .||+.+|||||++|+|+|++|+|+|. ++|||||++|++|||||||+++|+
T Consensus 153 ~~~~F~~GmkLE~vD~----------~~~~~i~vAtV~~v~g~rl~l~~~d~----~~dfwc~~~Sp~I~PVGW~~~~g~ 218 (447)
T 3h6z_A 153 LQSRFRLGLNLECVDK----------DRISQVRLATVTKIVGDRLFLRYFDS----DDGFWCHEDSPIIHPVGWATTVGH 218 (447)
T ss_dssp TSCSSCTTCEEEEECT----------TCTTEEEEEEEEEEETTEEEEEETTC----SCEEEEETTCTTEECTTHHHHHTC
T ss_pred cccccCCCCEEEEEcC----------CCCccEEEEEEEEEECCcEEEEEECC----CCCEEEeCCCCCccccchHHhcCc
Confidence 3578999999999987 38899999999999999999999653 579999999999999999999999
Q ss_pred CCCCCCCCCCCcCcHHHHHHHHhcCCCCCCccccccc-------cccccCCCCCCcEEEEecCCCCCceEEEEEEeEeCC
Q psy6234 84 PLIPPRTIETKYSDWKDFLVKRLTGARTLPSNFYHKV-------QESVKSRFRVDMNLEVVDKKRISQVKVATIEKIVGK 156 (260)
Q Consensus 84 ~L~pP~~~~~~~~~W~~~L~~~~~~~~~~P~~~f~~~-------~~~~~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~ 156 (260)
.|+||.+|..+.++|.++|.+ ..+.++|.++|+.. .+...++|++||||||+||++++.||||||++|+++
T Consensus 219 ~L~pP~~y~~~~~~~~~~ll~--~~~~~ap~~LF~~~~~~~~~~~~~~~~~F~~GMKLEavDp~~~~~icvATV~~V~~~ 296 (447)
T 3h6z_A 219 NLAAPQDYLERMLAGREAMIE--VHEDDATIELFKMNFTFDEYYSDGKTNSFVEGMKLEAVDPLNLSSICPATVMAVLKF 296 (447)
T ss_dssp EEECCHHHHHHHHTTTTTCCC--CCTTBCCGGGSCCSSCTHHHHTSCCCCCCCTTCEEEEEETTEEEEEEEEEEEEECST
T ss_pred cccCChhhhccchhHHHHHHh--hcccCCCHHHccCccccccccccccccccccccEEEeeccCCCCcEEEEEEEEeccC
Confidence 999999998776777666655 45678999999864 245678999999999999999999999999999965
Q ss_pred -eEEEEEec-C----CC-CEEEEcCCCCceechhhhhcCCcccCCCCCccccccc-c----CCCCCCccccCCCCCCCcC
Q psy6234 157 -RLQVHYYD-D----DD-GFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKG-I----RDRDDATEDLFPLSVGTAG 224 (260)
Q Consensus 157 -rl~v~~~~-~----~~-~~w~~~~S~~I~PvGw~~~~g~~L~pP~~y~~~~~~~-~----~~~~~a~~~~f~~~~~~~~ 224 (260)
+++|+||| + .+ .||||++|++|||||||++||++|+||+||....+.| . .+..+||.++|++
T Consensus 297 ~~~~v~~Dg~~~~~~~~d~f~~~~~S~~I~PvGwce~ng~~L~pP~gy~~~~f~W~~yl~~~~a~~aP~~lF~~------ 370 (447)
T 3h6z_A 297 GYMMIRIDSYQPDASGSDWFCYHEKSPCIFPAGFCSVNNISVTPPNGYDSRTFTWEGYLSDTGAVAAGQHLFHD------ 370 (447)
T ss_dssp TEEEEEETTSCTTCTTTTCEEEETTCTTEECTTHHHHTTCCCCCCTTCCTTTCCHHHHHHHHTCCBCCGGGSCC------
T ss_pred CEEEEEECCCCcccCCCccEEEeCCCCCcCccchHHhcCccCCCCCCccccCCcHHHHHHhhCCCcCcHHHcCC------
Confidence 67899998 1 23 4899999999999999999999999999998765543 2 2457788899975
Q ss_pred CCCCCCCCCCCCCCCCCEEEEecCCCCCCceeeeeC
Q psy6234 225 TKLSPGTGQTGGFVVGMKLESVDPLNLSDIWKRQQH 260 (260)
Q Consensus 225 ~~~~~~~~~~~~F~~GMKLEaVDp~~p~~IcvATv~ 260 (260)
..+.|+|++|||||||||+||.+||||||.
T Consensus 371 ------~~~~~~F~~gmkLEAvD~~np~~icvATV~ 400 (447)
T 3h6z_A 371 ------IIPDHGFEVGMSLECADLMDPRLVCVATVA 400 (447)
T ss_dssp ------CCCCCCCCTTCEEEEECTTSTTCEEEEEEE
T ss_pred ------CCCCCccccCCEEEeecCCCCCcEEEEEEe
Confidence 335799999999999999999999999983
No 9
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=100.00 E-value=5.9e-66 Score=452.24 Aligned_cols=181 Identities=31% Similarity=0.555 Sum_probs=170.0
Q ss_pred cccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEEcccCCCCCCCeeeeCCCCCeecccchhccCC
Q psy6234 4 CWENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRYEGFGEDSSKDFWVNLCSSMVHPVGWCATRGK 83 (260)
Q Consensus 4 ~~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvGw~~~~g~ 83 (260)
.++.|++|||||++|+ .||+.+|||||++++|+||+|||||++ +++||||+++|++|||||||+++|+
T Consensus 59 ~~~~f~vGmKLEa~D~----------~~~~~~~vATV~~v~g~~l~l~~dG~d--~~~DfW~~~~S~~I~PvGwc~~~g~ 126 (243)
T 2biv_A 59 PVNDFKVGMKLEARDP----------RNATSVCIATVIGITGARLRLRLDGSD--NRNDFWRLVDSPDIQPVGTCEKEGD 126 (243)
T ss_dssp CCCCCCTTCEEEEEET----------TEEEEEEEEEEEEEETTEEEEEETTSC--SSSCEEEETTCTTEECTTHHHHTTC
T ss_pred CcccccCCCEEEEecC----------CCCCcEEEEEEEEEeCCEEEEEECCCC--CCCCEeecCCCCccccChhHHhcCC
Confidence 4689999999999987 378899999999999999999999985 5789999999999999999999999
Q ss_pred CCCCCCCCCCCcCcHHHHHHHHhcCCCCCCcccccccc-ccccCCCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEEE
Q psy6234 84 PLIPPRTIETKYSDWKDFLVKRLTGARTLPSNFYHKVQ-ESVKSRFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVHY 162 (260)
Q Consensus 84 ~L~pP~~~~~~~~~W~~~L~~~~~~~~~~P~~~f~~~~-~~~~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~~ 162 (260)
.|+||.+|+.++|+|.+||+++++|+.+||.++|+... .+..+.|++||||||+|++|+.+||||||++|.|+||+|||
T Consensus 127 ~L~pP~g~~~~~f~W~~yL~~tl~ga~~aP~~lF~~~~~~~~~~~F~~GmKLEavD~~~p~~icvATV~~v~g~rl~v~f 206 (243)
T 2biv_A 127 LLQPPLGYQMNTSSWPMFLLKTLNGSEMASATLFKKEPPKPPLNNFKVGMKLEAIDKKNPYLICPATIGDVKGDEVHITF 206 (243)
T ss_dssp CCCCCTTCSSCGGGHHHHHHHHHTTCCBCCGGGSCCCCCCCSSCCCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEEE
T ss_pred ccCCCcccccccchHHHHHHHhccCCccCCHHHhccCCCCCccccccCCCEEEEEccCCCCeEEEEEEEEecCCEEEEEE
Confidence 99999999999999999999988899999999998653 34568999999999999999999999999999999999999
Q ss_pred ec--CCCCEEEEcCCCCceechhhhhcCCcccCCCC
Q psy6234 163 YD--DDDGFCCHQDSPLIHPVGWARRTGHLISAPPL 196 (260)
Q Consensus 163 ~~--~~~~~w~~~~S~~I~PvGw~~~~g~~L~pP~~ 196 (260)
|| +.+|||||++||+|||||||++||++|+||..
T Consensus 207 Dgw~~~~D~W~~~dSp~I~PvGWc~~~g~~L~pP~~ 242 (243)
T 2biv_A 207 DGWSGAFDYWCKYDSRDIFPAGWCRLTGDVLQPPGT 242 (243)
T ss_dssp TTSCGGGCEEEETTCTTEECTTHHHHHTCCBCCCCC
T ss_pred CCCCCcCCEEEeCCCCCeecCchHHhhCCCCCCcCC
Confidence 99 67899999999999999999999999999963
No 10
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=100.00 E-value=1.5e-64 Score=447.52 Aligned_cols=185 Identities=28% Similarity=0.484 Sum_probs=172.0
Q ss_pred cccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEEcccCCCCCCCeeeeCCCCCeecccchhccCC
Q psy6234 4 CWENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRYEGFGEDSSKDFWVNLCSSMVHPVGWCATRGK 83 (260)
Q Consensus 4 ~~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvGw~~~~g~ 83 (260)
.++.|++|||||++|+ .+++.+|||||++|+|+||+|||||++ +++|||||++|++|||||||+++|+
T Consensus 31 ~~~~F~vGMKLEavDp----------~~~~~icvATV~~v~g~~l~l~~DG~d--~~~DfW~~~~S~~I~PvGwc~~~g~ 98 (265)
T 2r58_A 31 PNNDFKIGMKLEALDP----------RNVTSTCIATVVGVLGSRLRLRLDGSD--SQNDFWRLVDSTEIHAIGHCEKNGG 98 (265)
T ss_dssp CCCCCCTTCEEEEEET----------TEEEEEEEEEEEEEETTEEEEEETTSC--SSCCEEEETTCTTEECTTHHHHTTC
T ss_pred CccccccCCEeEEecC----------CCCCCEEEEEEEEEeCCEEEEEeCCCC--CcCCEeEeCCCCCeeccccHHhcCC
Confidence 3689999999999987 378899999999999999999999985 5789999999999999999999999
Q ss_pred CCCCCCCCCCCcCcHHHHHHHHhcCCCCCCcccccccc-ccccCCCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEEE
Q psy6234 84 PLIPPRTIETKYSDWKDFLVKRLTGARTLPSNFYHKVQ-ESVKSRFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVHY 162 (260)
Q Consensus 84 ~L~pP~~~~~~~~~W~~~L~~~~~~~~~~P~~~f~~~~-~~~~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~~ 162 (260)
.|+||.+|+.+.|+|.+||+++++|+.++|.++|+... .+..+.|++||||||+|++|+.+||||||++|.|+||+|||
T Consensus 99 ~L~pP~g~~~~~f~W~~yL~ktl~ga~~aP~~lF~~~~~~~~~~~F~vGMKLEavD~~np~~icvATV~~v~g~rl~v~f 178 (265)
T 2r58_A 99 MLQPPLGFCMNASSWPGYLCKILNNAMVAPEEIFQPEPPEPEENLFKVGQKLEAVDKKNPQLICCATVDAIKDDQIHVTF 178 (265)
T ss_dssp CCCCCTTCSSCGGGHHHHHHHHHTTCCBCCGGGSCCCCCCCSSCCCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEEE
T ss_pred cccCccccccCcCCHHHHHHHhhcCCccCCHHHhcccCCCCcccccccCcEEEeccCCCCCCEEEEEEEEecCCEEEEEe
Confidence 99999999999999999999988899999999998643 34567999999999999999999999999999999999999
Q ss_pred ec--CCCCEEEEcCCCCceechhhhhcCCcccCCCCCccc
Q psy6234 163 YD--DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDR 200 (260)
Q Consensus 163 ~~--~~~~~w~~~~S~~I~PvGw~~~~g~~L~pP~~y~~~ 200 (260)
|| +.+|||||++|++|||||||+++||+|+||.+|...
T Consensus 179 DGw~~~~D~W~~~~Sp~I~PvGWc~~~g~~L~pP~~~~~~ 218 (265)
T 2r58_A 179 DGWRGAFDYWCNYRSRDIFPAGWCARSCHPMQPPGHKSRM 218 (265)
T ss_dssp TTSCGGGCEEEETTCTTEECTTHHHHHTCCCBCCCCCC--
T ss_pred CCCCCcCCEEEECCCCCeecCchHHhcCCcCCCCCCcCcC
Confidence 99 668999999999999999999999999999988654
No 11
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=100.00 E-value=2e-61 Score=439.70 Aligned_cols=178 Identities=31% Similarity=0.596 Sum_probs=163.9
Q ss_pred ccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEEcccCCCCCCCeeeeCCCCCeecccchhccCCC
Q psy6234 5 WENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRYEGFGEDSSKDFWVNLCSSMVHPVGWCATRGKP 84 (260)
Q Consensus 5 ~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvGw~~~~g~~ 84 (260)
.+.|++|||||++|+ .||+.+|||||++|+|+||+|||||++ +++|||||++|++|||||||+++|+.
T Consensus 141 ~~~F~vGMKLEavDp----------~~p~~icvATV~~V~g~~l~v~~Dg~~--~~~d~w~~~~Sp~I~PVGWCe~~g~~ 208 (324)
T 3ut1_A 141 PSGFRVGMKLEAVDK----------KNPSFICVATVTDMVDNRFLVHFDNWD--ESYDYWCEASSPHIHPVGWCKEHRRT 208 (324)
T ss_dssp CCSCCTTCEEEEEET----------TEEEEEEEEEEEEEETTEEEEEETTSC--GGGCEEECTTCTTEECTTHHHHTTCC
T ss_pred ccccccCCEEEEecC----------CCCCcEEEEEEEEEECCEEEEEECCCC--CcCCEEEECCCCCcccCcHHHhcCCC
Confidence 478999999999987 378999999999999999999999995 57999999999999999999999999
Q ss_pred CCCCCCCCC-CcCcHHHHHHHHhcCCCCCCccccccccccccCCCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEEEe
Q psy6234 85 LIPPRTIET-KYSDWKDFLVKRLTGARTLPSNFYHKVQESVKSRFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVHYY 163 (260)
Q Consensus 85 L~pP~~~~~-~~~~W~~~L~~~~~~~~~~P~~~f~~~~~~~~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~~~ 163 (260)
|+||.+|.. +.|+|.+||++ +|+.+||.++|+.. ..+.|++||||||+|++||.+||||||++|.|+||+||||
T Consensus 209 L~pP~gy~~~~~f~W~~YL~~--t~a~aaP~~~F~~~---~~~~F~~gmkLEAvD~~~p~licvATV~~v~g~~l~v~fD 283 (324)
T 3ut1_A 209 LITPPGYPNVKHFSWDKYLEE--TNSLPAPARAFKVK---PPHGFQKKMKLEVVDKRNPMFIRVATVADTDDHRVKVHFD 283 (324)
T ss_dssp EECCTTC--CCSCCHHHHHHH--TTCCBCCGGGCCCC---CCCCCCTTCEEEEECSSSTTCEEEEEEEEECSSEEEEEET
T ss_pred CCCCCCCCCCCcccHHHHHHh--hCCCCCCHHHhccc---ccccCCCCCeeeccCCCCCCceeEEEEEEecCCEEEEEeC
Confidence 999999986 78999999998 79999999999753 3589999999999999999999999999999999999999
Q ss_pred c--CCCCEEEEcCCCCceechhhhhcCCcccCCCCCcc
Q psy6234 164 D--DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTD 199 (260)
Q Consensus 164 ~--~~~~~w~~~~S~~I~PvGw~~~~g~~L~pP~~y~~ 199 (260)
| +.+|||||++||+|||||||+++||+||||.++.+
T Consensus 284 gw~~~~d~w~~~~S~dI~PvGWC~~~g~~LqpP~~~~~ 321 (324)
T 3ut1_A 284 GWNNCYDYWIDADSPDIHPVGWCSKTGHPLQPPLSPLE 321 (324)
T ss_dssp TSCGGGCEEEETTCTTEECTTHHHHHTCCCBCSCC---
T ss_pred CCCCCCCEEEeCCCCCeeceehHhhcCCCCcCcCCCcc
Confidence 9 67899999999999999999999999999999865
No 12
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=100.00 E-value=6.8e-61 Score=437.82 Aligned_cols=179 Identities=32% Similarity=0.648 Sum_probs=167.5
Q ss_pred ccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEEcccCCCCCCCeeeeCCCCCeecccchhccCCC
Q psy6234 5 WENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRYEGFGEDSSKDFWVNLCSSMVHPVGWCATRGKP 84 (260)
Q Consensus 5 ~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvGw~~~~g~~ 84 (260)
.+.|++|||||++|+ .||+.+|||||++|+|+|++|||||++ +++||||+++|++|||||||+++|++
T Consensus 146 ~~~F~vGmKLEavD~----------~np~~icvATV~~v~g~r~~v~~Dg~~--~~~D~w~~~~S~~I~PVGwc~~~g~~ 213 (331)
T 1oz2_A 146 PLGFQVGMKLEAVDR----------MNPSLVCVASVTDVVDSRFLVHFDNWD--DTYDYWCDPSSPYIHPVGWCQKQGKP 213 (331)
T ss_dssp CTTCCTTCEEEEECT----------TSTTCEEEEEEEEEETTEEEEEETTSC--GGGCEEECTTCTTEECTTHHHHHTCC
T ss_pred ccccccccEEEeccC----------CCCCcEEEEEEEEeeCCEEEEEeCCCC--CccCEEEecCCCCccCCchHHhcCCC
Confidence 478999999999986 388999999999999999999999996 57999999999999999999999999
Q ss_pred CCCCCCCCC-CcCcHHHHHHHHhcCCCCCCccccccccccccCCCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEEEe
Q psy6234 85 LIPPRTIET-KYSDWKDFLVKRLTGARTLPSNFYHKVQESVKSRFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVHYY 163 (260)
Q Consensus 85 L~pP~~~~~-~~~~W~~~L~~~~~~~~~~P~~~f~~~~~~~~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~~~ 163 (260)
|+||.+|.. +.|+|.+||++ +|+.+||+++|+.. ..+.|++||||||+|++|+.+||||||++|.|++|+|+||
T Consensus 214 L~pP~gy~~~~~f~W~~yL~~--~ga~~aP~~~F~~~---~~~~F~~gmKLEavD~~~p~~ic~AtV~~v~~~~l~v~fD 288 (331)
T 1oz2_A 214 LTPPQDYPDPDNFCWEKYLEE--TGASAVPTWAFKVR---PPHSFLVNMKLEAVDRRNPALIRVASVEDVEDHRIKIHFD 288 (331)
T ss_dssp EECSTTCSSGGGCCHHHHHHH--HTCCBCCGGGCCCC---CCCCCCTTCEEEEECSSSTTCEEEEEEEEECSSEEEEEET
T ss_pred CCCCCCCCcCCcccHHHHHHh--cCCCcCCHHHcccc---cccccccCceeEeecccCCCcEEeeEEEEEcCCEEEEEeC
Confidence 999999974 67999999988 79999999999753 2589999999999999999999999999999999999999
Q ss_pred c--CCCCEEEEcCCCCceechhhhhcCCcccCCCCCccc
Q psy6234 164 D--DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDR 200 (260)
Q Consensus 164 ~--~~~~~w~~~~S~~I~PvGw~~~~g~~L~pP~~y~~~ 200 (260)
| +.+|||||++|++|||||||++|||+|+||.+|...
T Consensus 289 gw~~~~d~w~~~dS~~I~PvGWc~~~g~~L~pP~~~~~~ 327 (331)
T 1oz2_A 289 GWSHGYDFWIDADHPDIHPAGWCSKTGHPLQPPLGPREP 327 (331)
T ss_dssp TBCGGGCEEEETTCTTEECTTHHHHHTCCCBCCCCTTCT
T ss_pred CCCCcCCEEEECCCCCccccchHHhcCCCCCCcCCCCcC
Confidence 9 678999999999999999999999999999998653
No 13
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=100.00 E-value=3.9e-55 Score=383.64 Aligned_cols=181 Identities=26% Similarity=0.359 Sum_probs=138.3
Q ss_pred CCCeecccchhccCCCCCCCCCCCCCcCcHHHHHHHHhcCCCCCCccccccccccccCCCCCCcEEEEecCCCCCceEEE
Q psy6234 69 SSMVHPVGWCATRGKPLIPPRTIETKYSDWKDFLVKRLTGARTLPSNFYHKVQESVKSRFRVDMNLEVVDKKRISQVKVA 148 (260)
Q Consensus 69 s~~ihPvGw~~~~g~~L~pP~~~~~~~~~W~~~L~~~~~~~~~~P~~~f~~~~~~~~~~F~vGmkLEavD~~~~~~i~vA 148 (260)
+.+.-|||||+++++.|.||+++..+.|+|.+||++ +++.+||.++|++...+..+.|++||||||+|++|+..||||
T Consensus 6 ~~~~~~v~w~~~~~~~~~pp~~~~~~~f~W~~yL~~--t~~~aaP~~lF~~~~~~~~~~f~vGmKLEa~D~~~~~~~~vA 83 (243)
T 2biv_A 6 NEDSMDVKKENQEKTPQSSTSSVQRDDFHWEEYLKE--TGSISAPSECFRQSQIPPVNDFKVGMKLEARDPRNATSVCIA 83 (243)
T ss_dssp --------------------------CCCHHHHHHH--HTCCBCCGGGSSSCSSCCCCCCCTTCEEEEEETTEEEEEEEE
T ss_pred cCCccccceeecCCccCCCCCccccCCCCHHHHHHH--cCCccCCHHHHcCCCCCCcccccCCCEEEEecCCCCCcEEEE
Confidence 456679999999999999999999999999999988 799999999999776677899999999999999999999999
Q ss_pred EEEeEeCCeEEEEEec--CCCCEEEEcCCCCceechhhhhcCCcccCCCCCcccccccc-------CCCCCCccccCCCC
Q psy6234 149 TIEKIVGKRLQVHYYD--DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGI-------RDRDDATEDLFPLS 219 (260)
Q Consensus 149 tV~~v~g~rl~v~~~~--~~~~~w~~~~S~~I~PvGw~~~~g~~L~pP~~y~~~~~~~~-------~~~~~a~~~~f~~~ 219 (260)
||++|.|+|++|+||| +.+||||+++|++|||||||++||++|+||.+|....+.|. -++..||.++|+..
T Consensus 84 TV~~v~g~~l~l~~dG~d~~~DfW~~~~S~~I~PvGwc~~~g~~L~pP~g~~~~~f~W~~yL~~tl~ga~~aP~~lF~~~ 163 (243)
T 2biv_A 84 TVIGITGARLRLRLDGSDNRNDFWRLVDSPDIQPVGTCEKEGDLLQPPLGYQMNTSSWPMFLLKTLNGSEMASATLFKKE 163 (243)
T ss_dssp EEEEEETTEEEEEETTSCSSSCEEEETTCTTEECTTHHHHTTCCCCCCTTCSSCGGGHHHHHHHHHTTCCBCCGGGSCCC
T ss_pred EEEEEeCCEEEEEECCCCCCCCEeecCCCCccccChhHHhcCCccCCCcccccccchHHHHHHHhccCCccCCHHHhccC
Confidence 9999999999999999 56899999999999999999999999999999986544331 14567899999763
Q ss_pred CCCcCCCCCCCCCCCCCCCCCCEEEEecCCCCCCceeeeeC
Q psy6234 220 VGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDIWKRQQH 260 (260)
Q Consensus 220 ~~~~~~~~~~~~~~~~~F~~GMKLEaVDp~~p~~IcvATv~ 260 (260)
. .....|+|++||||||||++||.+||||||.
T Consensus 164 ~---------~~~~~~~F~~GmKLEavD~~~p~~icvATV~ 195 (243)
T 2biv_A 164 P---------PKPPLNNFKVGMKLEAIDKKNPYLICPATIG 195 (243)
T ss_dssp C---------CCCSSCCCCTTCEEEEECTTSTTCEEEEEEE
T ss_pred C---------CCCccccccCCCEEEEEccCCCCeEEEEEEE
Confidence 2 2345789999999999999999999999993
No 14
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=100.00 E-value=1.5e-47 Score=338.71 Aligned_cols=156 Identities=24% Similarity=0.399 Sum_probs=137.9
Q ss_pred CcCcHHHHHHHHhcCCCCCCccccccccccccCCCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEEEec--CCCCEEE
Q psy6234 94 KYSDWKDFLVKRLTGARTLPSNFYHKVQESVKSRFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVHYYD--DDDGFCC 171 (260)
Q Consensus 94 ~~~~W~~~L~~~~~~~~~~P~~~f~~~~~~~~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~~~~--~~~~~w~ 171 (260)
..|+|.+||++ +++.+||.++|++...+..+.|++||||||+|++|+..||||||++|+|.||+|+||| +.+||||
T Consensus 3 ~~f~W~~yL~~--~~a~~aP~~~Fk~~~~~~~~~F~vGMKLEavDp~~~~~icvATV~~v~g~~l~l~~DG~d~~~DfW~ 80 (265)
T 2r58_A 3 MAFDWDAYLEE--TGSEAAPAKCFKQAQNPPNNDFKIGMKLEALDPRNVTSTCIATVVGVLGSRLRLRLDGSDSQNDFWR 80 (265)
T ss_dssp -CCCHHHHHHH--TTCCBCCGGGSSSCSSCCCCCCCTTCEEEEEETTEEEEEEEEEEEEEETTEEEEEETTSCSSCCEEE
T ss_pred ccccHHHHHHh--cCCccCCHHHhcCCCCCCccccccCCEeEEecCCCCCCEEEEEEEEEeCCEEEEEeCCCCCcCCEeE
Confidence 45899999988 7999999999998776778999999999999999999999999999999999999998 5789999
Q ss_pred EcCCCCceechhhhhcCCcccCCCCCccccccc-cC------CCCCCccccCCCCCCCcCCCCCCCCCCCCCCCCCCEEE
Q psy6234 172 HQDSPLIHPVGWARRTGHLISAPPLYTDRCAKG-IR------DRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLE 244 (260)
Q Consensus 172 ~~~S~~I~PvGw~~~~g~~L~pP~~y~~~~~~~-~~------~~~~a~~~~f~~~~~~~~~~~~~~~~~~~~F~~GMKLE 244 (260)
|++|++|||||||++||++|+||.||..+.+.| .| .+..||.++|.... .....++|++|||||
T Consensus 81 ~~~S~~I~PvGwc~~~g~~L~pP~g~~~~~f~W~~yL~ktl~ga~~aP~~lF~~~~---------~~~~~~~F~vGMKLE 151 (265)
T 2r58_A 81 LVDSTEIHAIGHCEKNGGMLQPPLGFCMNASSWPGYLCKILNNAMVAPEEIFQPEP---------PEPEENLFKVGQKLE 151 (265)
T ss_dssp ETTCTTEECTTHHHHTTCCCCCCTTCSSCGGGHHHHHHHHHTTCCBCCGGGSCCCC---------CCCSSCCCCTTCEEE
T ss_pred eCCCCCeeccccHHhcCCcccCccccccCcCCHHHHHHHhhcCCccCCHHHhcccC---------CCCcccccccCcEEE
Confidence 999999999999999999999999998654433 11 45678999997532 244678999999999
Q ss_pred EecCCCCCCceeeeeC
Q psy6234 245 SVDPLNLSDIWKRQQH 260 (260)
Q Consensus 245 aVDp~~p~~IcvATv~ 260 (260)
|||++||.+||||||.
T Consensus 152 avD~~np~~icvATV~ 167 (265)
T 2r58_A 152 AVDKKNPQLICCATVD 167 (265)
T ss_dssp EECTTSTTCEEEEEEE
T ss_pred eccCCCCCCEEEEEEE
Confidence 9999999999999993
No 15
>1wjr_A KIAA1617 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=100.00 E-value=2.3e-39 Score=257.25 Aligned_cols=115 Identities=29% Similarity=0.513 Sum_probs=105.9
Q ss_pred cccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEEcccCCCCCCCeeeeCCCCCeecccchhccCC
Q psy6234 4 CWENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRYEGFGEDSSKDFWVNLCSSMVHPVGWCATRGK 83 (260)
Q Consensus 4 ~~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvGw~~~~g~ 83 (260)
-++.|++|||||++|+ .+|..+|||||++++|+||+|||||+++++++||||+++|++|||||||+++|+
T Consensus 8 p~~~f~~GmKLEa~D~----------~~p~~~~vAtV~~v~g~rl~l~~dG~~~~~~~D~W~~~~s~~I~PvGWc~~~g~ 77 (127)
T 1wjr_A 8 PIDLITVGSLIELQDS----------QNPFQYWIVSVIENVGGRLRLRYVGLEDTESYDQWLFYLDYRLRPVGWCQENKY 77 (127)
T ss_dssp HHHHCCTTCEEEEECS----------SCSSCEEEEECCCEETTEEEECBTTCSSCCSSCEEEETTCSSCBCTTTHHHHCC
T ss_pred chhhccCCCEeEEecC----------CCCCcEEEEEEeeeeCCEEEEEecCCCCCCCCCEeEeCCCCCccccCcHHhhCC
Confidence 4688999999999987 378999999999999999999999998777899999999999999999999999
Q ss_pred CCCCCCCCCC--CcCcHHHHHHHHhcCC--CCCCccccccccccccCCC
Q psy6234 84 PLIPPRTIET--KYSDWKDFLVKRLTGA--RTLPSNFYHKVQESVKSRF 128 (260)
Q Consensus 84 ~L~pP~~~~~--~~~~W~~~L~~~~~~~--~~~P~~~f~~~~~~~~~~F 128 (260)
+|+||.+|.. +.++|++||+++++++ .++|.++|+..+....|.|
T Consensus 78 ~L~pP~~~~~~~~~~~W~~yL~~~l~~a~~~~~P~~lFk~~~~~~~h~~ 126 (127)
T 1wjr_A 78 RMDPPSEIYPLKMASEWKCTLEKSLIDAAKFPLPMEVFKDHADLSGPSS 126 (127)
T ss_dssp CBCCCTTTTTTSCHHHHHHHHHHHHHHHHHSCCCGGGGCCCCCCCCCCC
T ss_pred ccCCcccccCCCCcCCHHHHHHHHhcccccccCCHHHhCCCCCCCCCCC
Confidence 9999999985 4699999999988888 8999999998877777877
No 16
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=99.97 E-value=2.6e-32 Score=209.47 Aligned_cols=86 Identities=33% Similarity=0.485 Sum_probs=78.9
Q ss_pred CccccccccccccCCCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEEEec--CCCCEEEEcCCCCceechhhhhcCCc
Q psy6234 113 PSNFYHKVQESVKSRFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVHYYD--DDDGFCCHQDSPLIHPVGWARRTGHL 190 (260)
Q Consensus 113 P~~~f~~~~~~~~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~~~~--~~~~~w~~~~S~~I~PvGw~~~~g~~ 190 (260)
+.++|+.. +.+.|++||||||+|++|+.+||||||++|.|+||+||||| +.+|||||++|++|||||||+++|++
T Consensus 2 s~~~f~~~---p~~~F~~GMKLEAvD~~~p~~icvATV~~v~g~rl~v~fDGw~~~~D~W~~~dSpdIhPVGWc~~~g~~ 78 (107)
T 1wjq_A 2 SSGSSGVK---PPHGFQKKMKLEVVDKRNPMFIRVATVADTDDHRVKVHFDGWNNCYDYWIDADSPDIHPVGWCSKTGHP 78 (107)
T ss_dssp CCSCCCCC---CSSSCCSSCEEEEECTTCTTCEEEEEEEEECSSCEEEECSSSCGGGCEEECTTCSSCEETTHHHHHTCC
T ss_pred cccccccC---CcccCCCCCEEEEEcCCCCCcEEeEEEEEecCCEEEEEeCCCCCcCCEEEECCCCCcccCcHHHhcCCC
Confidence 35778753 35889999999999999999999999999999999999999 67999999999999999999999999
Q ss_pred ccCCCCCcccc
Q psy6234 191 ISAPPLYTDRC 201 (260)
Q Consensus 191 L~pP~~y~~~~ 201 (260)
|+||.+|....
T Consensus 79 LqpP~~~~~~~ 89 (107)
T 1wjq_A 79 LQPPLSPLELM 89 (107)
T ss_dssp CBCCSCTTTTC
T ss_pred CCCCCCcCccc
Confidence 99999998754
No 17
>1wjr_A KIAA1617 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=99.97 E-value=1.7e-31 Score=212.00 Aligned_cols=105 Identities=15% Similarity=0.121 Sum_probs=88.8
Q ss_pred cccCCCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEEEec--C--CCCEEEEcCCCCceechhhhhcCCcccCCCCCc
Q psy6234 123 SVKSRFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVHYYD--D--DDGFCCHQDSPLIHPVGWARRTGHLISAPPLYT 198 (260)
Q Consensus 123 ~~~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~~~~--~--~~~~w~~~~S~~I~PvGw~~~~g~~L~pP~~y~ 198 (260)
++.+.|++||||||+|++|+.+||||||++|+|+|++|+||| + .+||||+++|++|||||||+++|++|+||.+|.
T Consensus 7 ~p~~~f~~GmKLEa~D~~~p~~~~vAtV~~v~g~rl~l~~dG~~~~~~~D~W~~~~s~~I~PvGWc~~~g~~L~pP~~~~ 86 (127)
T 1wjr_A 7 GPIDLITVGSLIELQDSQNPFQYWIVSVIENVGGRLRLRYVGLEDTESYDQWLFYLDYRLRPVGWCQENKYRMDPPSEIY 86 (127)
T ss_dssp SHHHHCCTTCEEEEECSSCSSCEEEEECCCEETTEEEECBTTCSSCCSSCEEEETTCSSCBCTTTHHHHCCCBCCCTTTT
T ss_pred CchhhccCCCEeEEecCCCCCcEEEEEEeeeeCCEEEEEecCCCCCCCCCEeEeCCCCCccccCcHHhhCCccCCccccc
Confidence 455789999999999999999999999999999999999999 3 589999999999999999999999999999997
Q ss_pred cc--cccc-cC-----C-C--CCCccccCCCCCCCcCCCCCCCCCCCCCC
Q psy6234 199 DR--CAKG-IR-----D-R--DDATEDLFPLSVGTAGTKLSPGTGQTGGF 237 (260)
Q Consensus 199 ~~--~~~~-~~-----~-~--~~a~~~~f~~~~~~~~~~~~~~~~~~~~F 237 (260)
.. .+.| .| . + ..+|.++|+.. +..+.|+|
T Consensus 87 ~~~~~~~W~~yL~~~l~~a~~~~~P~~lFk~~----------~~~~~h~~ 126 (127)
T 1wjr_A 87 PLKMASEWKCTLEKSLIDAAKFPLPMEVFKDH----------ADLSGPSS 126 (127)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHSCCCGGGGCCC----------CCCCCCCC
T ss_pred CCCCcCCHHHHHHHHhcccccccCCHHHhCCC----------CCCCCCCC
Confidence 43 2222 21 1 2 57899999864 24567877
No 18
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=99.96 E-value=2.7e-29 Score=192.76 Aligned_cols=77 Identities=30% Similarity=0.638 Sum_probs=71.8
Q ss_pred cCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEEcccCCCCCCCeeeeCCCCCeecccchhccCCCC
Q psy6234 6 ENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRYEGFGEDSSKDFWVNLCSSMVHPVGWCATRGKPL 85 (260)
Q Consensus 6 ~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvGw~~~~g~~L 85 (260)
..|++|||||++|+ .||..+|||||++|.|+||+||||||+ +++||||+++|++|||||||+++|++|
T Consensus 12 ~~F~~GMKLEAvD~----------~~p~~icvATV~~v~g~rl~v~fDGw~--~~~D~W~~~dSpdIhPVGWc~~~g~~L 79 (107)
T 1wjq_A 12 HGFQKKMKLEVVDK----------RNPMFIRVATVADTDDHRVKVHFDGWN--NCYDYWIDADSPDIHPVGWCSKTGHPL 79 (107)
T ss_dssp SSCCSSCEEEEECT----------TCTTCEEEEEEEEECSSCEEEECSSSC--GGGCEEECTTCSSCEETTHHHHHTCCC
T ss_pred ccCCCCCEEEEEcC----------CCCCcEEeEEEEEecCCEEEEEeCCCC--CcCCEEEECCCCCcccCcHHHhcCCCC
Confidence 57999999999987 388999999999999999999999996 479999999999999999999999999
Q ss_pred CCCCCCCCC
Q psy6234 86 IPPRTIETK 94 (260)
Q Consensus 86 ~pP~~~~~~ 94 (260)
+||.++.+.
T Consensus 80 qpP~~~~~~ 88 (107)
T 1wjq_A 80 QPPLSPLEL 88 (107)
T ss_dssp BCCSCTTTT
T ss_pred CCCCCcCcc
Confidence 999998754
No 19
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=99.86 E-value=2.1e-22 Score=149.83 Aligned_cols=72 Identities=13% Similarity=0.039 Sum_probs=67.3
Q ss_pred ccccCCCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEEEec--CCCCEEEEcCCCCceechhhhhcCCcccC
Q psy6234 122 ESVKSRFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVHYYD--DDDGFCCHQDSPLIHPVGWARRTGHLISA 193 (260)
Q Consensus 122 ~~~~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~~~~--~~~~~w~~~~S~~I~PvGw~~~~g~~L~p 193 (260)
....+.|++||||||+|+.++..+|+|||+++.|.||+|||+| +.+||||+++|++|||+|||...+..|+.
T Consensus 14 ~~~~~~F~vGmkLEA~D~~~~~~~a~i~~v~~~~~~v~VHfdGW~~~yDeWv~~dS~~I~P~g~~~~~~~~l~~ 87 (88)
T 2eqm_A 14 NRPGITFEIGARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYWDSNRLRPLERPALRKEGLKD 87 (88)
T ss_dssp SCSSCCCCSSCEEEEECTTSCEEEEEEEEEETTTTEEEEEESSSTTTEEEEEETTSCCEECCCCCCTTCTTCCC
T ss_pred CCCcCcCCCCCEEEEEcCCCCeeEEEEEEEeccCCEEEEEECCCCCcccEEeeCCCCcEeccccccccccccCC
Confidence 3456899999999999999999999999999999999999999 78999999999999999999999999874
No 20
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=99.81 E-value=3.4e-20 Score=137.92 Aligned_cols=70 Identities=17% Similarity=0.134 Sum_probs=63.4
Q ss_pred cCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEEcccCCCCCCCeeeeCCCCCeecccchhccCCCC
Q psy6234 6 ENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRYEGFGEDSSKDFWVNLCSSMVHPVGWCATRGKPL 85 (260)
Q Consensus 6 ~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvGw~~~~g~~L 85 (260)
+.|++|||||++|.. +|...++|+|+++.|+|++|||+||. .++||||+++|++|||+|||+.++..|
T Consensus 18 ~~F~vGmkLEA~D~~----------~~~~~a~i~~v~~~~~~v~VHfdGW~--~~yDeWv~~dS~~I~P~g~~~~~~~~l 85 (88)
T 2eqm_A 18 ITFEIGARLEALDYL----------QKWYPSRIEKIDYEEGKMLVHFERWS--HRYDEWIYWDSNRLRPLERPALRKEGL 85 (88)
T ss_dssp CCCCSSCEEEEECTT----------SCEEEEEEEEEETTTTEEEEEESSST--TTEEEEEETTSCCEECCCCCCTTCTTC
T ss_pred CcCCCCCEEEEEcCC----------CCeeEEEEEEEeccCCEEEEEECCCC--CcccEEeeCCCCcEecccccccccccc
Confidence 579999999999762 66778899999999999999999996 589999999999999999999999988
Q ss_pred CC
Q psy6234 86 IP 87 (260)
Q Consensus 86 ~p 87 (260)
+.
T Consensus 86 ~~ 87 (88)
T 2eqm_A 86 KD 87 (88)
T ss_dssp CC
T ss_pred CC
Confidence 74
No 21
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=99.80 E-value=7.6e-20 Score=130.30 Aligned_cols=57 Identities=25% Similarity=0.290 Sum_probs=53.0
Q ss_pred cccCCCCCCcEEEEecCCCCCceEEEEEEeE--eCCeEEEEEec--CCCCEEEEcCCCCceec
Q psy6234 123 SVKSRFRVDMNLEVVDKKRISQVKVATIEKI--VGKRLQVHYYD--DDDGFCCHQDSPLIHPV 181 (260)
Q Consensus 123 ~~~~~F~vGmkLEavD~~~~~~i~vAtV~~v--~g~rl~v~~~~--~~~~~w~~~~S~~I~Pv 181 (260)
+..+.|++||||||+|+.++. |+|||++| .|+|++|||+| +.+||||+++|++||||
T Consensus 8 ~~~~~F~vGmkLEa~d~~~p~--~~AtV~~v~~~~~~~~VhfdGw~~~~D~W~~~dS~~i~Pv 68 (69)
T 3sd4_A 8 RRGISFEVGAQLEARDRLKNW--YPAHIEDIDYEEGKVLIHFKRWNHRYDEWFCWDSPYLRPL 68 (69)
T ss_dssp CTTCCCSTTCEEEEECTTSCE--EEEEEEEEETTTTEEEEEETTSCGGGCEEEETTCTTEECC
T ss_pred CCCCCcCCCCEEEEEECCCCc--cccEEEEEeccCCEEEEEeCCCCCCCCEEEcCCCCCeeEC
Confidence 456889999999999999997 99999998 79999999999 67899999999999997
No 22
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=99.73 E-value=5.8e-18 Score=120.50 Aligned_cols=57 Identities=19% Similarity=0.297 Sum_probs=50.7
Q ss_pred ccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEE--eCCEEEEEEcccCCCCCCCeeeeCCCCCeecc
Q psy6234 5 WENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQI--AGYKALLRYEGFGEDSSKDFWVNLCSSMVHPV 75 (260)
Q Consensus 5 ~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~--~G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPv 75 (260)
-..|++|||||++|+. +|. |+|||++| .|+|++|||+||+ +++||||+++|++||||
T Consensus 10 ~~~F~vGmkLEa~d~~----------~p~--~~AtV~~v~~~~~~~~VhfdGw~--~~~D~W~~~dS~~i~Pv 68 (69)
T 3sd4_A 10 GISFEVGAQLEARDRL----------KNW--YPAHIEDIDYEEGKVLIHFKRWN--HRYDEWFCWDSPYLRPL 68 (69)
T ss_dssp TCCCSTTCEEEEECTT----------SCE--EEEEEEEEETTTTEEEEEETTSC--GGGCEEEETTCTTEECC
T ss_pred CCCcCCCCEEEEEECC----------CCc--cccEEEEEeccCCEEEEEeCCCC--CCCCEEEcCCCCCeeEC
Confidence 3579999999999762 554 99999998 8999999999996 57999999999999998
No 23
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=97.60 E-value=0.0014 Score=51.33 Aligned_cols=104 Identities=18% Similarity=0.263 Sum_probs=69.7
Q ss_pred cccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEEcccCCCCCCCeeeeCCCCCeecccchhccCCCCCCCC
Q psy6234 10 VGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRYEGFGEDSSKDFWVNLCSSMVHPVGWCATRGKPLIPPR 89 (260)
Q Consensus 10 ~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvGw~~~~g~~L~pP~ 89 (260)
.+|.+||... + ..+.-|+|..+-..-++++|++. |- .+...|+- ...|.||.
T Consensus 4 ~~~~VEV~~~-----------~-G~~y~a~V~~v~~d~~~V~f~n~--------w~---~~~~vp~~-----~vRlpP~~ 55 (128)
T 3h8z_A 4 QGLPVEVRGS-----------N-GAFYKGFVKDVHEDSVTIFFENN--------WQ---SERQIPFG-----DVRLPPPA 55 (128)
T ss_dssp TTCEEEEECT-----------T-SCEEEEEEEEECSSEEEEEETTC--------TT---CCEEEEGG-----GEECCCCC
T ss_pred cccEEEEecC-----------C-CCEEEEEEEEEeCCcEEEEEccc--------cC---cceEechh-----hEEcCCCc
Confidence 5899999853 2 56889999999889999999541 21 01111111 11122221
Q ss_pred CCCCCcCcHHHHHHHHhcCCCCCCccccccccccccCCCCCCcEEEEecCCC---CCceEEEEEEeEeCCeEEEEEec--
Q psy6234 90 TIETKYSDWKDFLVKRLTGARTLPSNFYHKVQESVKSRFRVDMNLEVVDKKR---ISQVKVATIEKIVGKRLQVHYYD-- 164 (260)
Q Consensus 90 ~~~~~~~~W~~~L~~~~~~~~~~P~~~f~~~~~~~~~~F~vGmkLEavD~~~---~~~i~vAtV~~v~g~rl~v~~~~-- 164 (260)
. ....|.+|+++|+..+.| +..-|+|+|+++.|+.+.|.|++
T Consensus 56 ~---------------------------------~~~~f~~gd~VEV~~~~~d~ep~gWw~a~I~~~kg~f~~V~y~~~~ 102 (128)
T 3h8z_A 56 D---------------------------------YNKEITEGDEVEVYSRANEQEPCGWWLARVRMMKGDFYVIEYAACD 102 (128)
T ss_dssp -------------------------------------CCCTTCEEEEEECC---CCCEEEEEEEEEEETTEEEEEETTC-
T ss_pred c---------------------------------cccCCCCCCEEEEEecCCCCCcCccEEEEEEEeeCCEEEEEEcCCC
Confidence 0 013599999999999864 56789999999999999999998
Q ss_pred CCCCEEEEcC
Q psy6234 165 DDDGFCCHQD 174 (260)
Q Consensus 165 ~~~~~w~~~~ 174 (260)
+.++-|+..+
T Consensus 103 ~~~~EiV~~~ 112 (128)
T 3h8z_A 103 ATYNEIVTLE 112 (128)
T ss_dssp ---CEEECGG
T ss_pred CCcceEEehh
Confidence 5678888744
No 24
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=97.04 E-value=0.0016 Score=50.99 Aligned_cols=59 Identities=24% Similarity=0.405 Sum_probs=44.5
Q ss_pred CcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEEcccCCCCCCCeeeeCCCCCeeccc
Q psy6234 7 NISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRYEGFGEDSSKDFWVNLCSSMVHPVG 76 (260)
Q Consensus 7 ~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvG 76 (260)
.|++|+++||..+..+ ..|..-|.|+|.++-|....+.|+|++ .+++=|+. ..+|.|+.
T Consensus 60 ~f~~gd~VEV~~~~~d-------~ep~gWw~a~I~~~kg~f~~V~y~~~~--~~~~EiV~--~~rlR~~n 118 (128)
T 3h8z_A 60 EITEGDEVEVYSRANE-------QEPCGWWLARVRMMKGDFYVIEYAACD--ATYNEIVT--LERLRPVN 118 (128)
T ss_dssp CCCTTCEEEEEECC----------CCCEEEEEEEEEEETTEEEEEETTC------CEEEC--GGGEEECC
T ss_pred CCCCCCEEEEEecCCC-------CCcCccEEEEEEEeeCCEEEEEEcCCC--CCcceEEe--hhheEeCC
Confidence 5899999999976422 357789999999999999999999996 47888887 45666654
No 25
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=96.14 E-value=0.11 Score=43.73 Aligned_cols=139 Identities=13% Similarity=0.187 Sum_probs=94.9
Q ss_pred ccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEe----CCEEEEEEcccCCCCCCCeeeeCCCCCeecccchhc
Q psy6234 5 WENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIA----GYKALLRYEGFGEDSSKDFWVNLCSSMVHPVGWCAT 80 (260)
Q Consensus 5 ~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~----G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvGw~~~ 80 (260)
...+.+|-++=+.-.+ .+...|....|.+.- .+|.|+=||. .+.-|| ..+.||+|=-+++
T Consensus 66 ~~~l~vG~RVVA~~~~---------~~~~~fY~GiVaE~p~~~N~~RyLVFFDD-----G~~~Yv--~~~~V~~Vc~~s~ 129 (213)
T 3dlm_A 66 ADKLYVGSRVVAKYKD---------GNQVWLYAGIVAETPNVKNKLRFLIFFDD-----GYASYV--TQSELYPICRPLK 129 (213)
T ss_dssp GGGCCTTCEEEEEEEC---------SSCEEEEEEEEEECCCTTTTSCEEEEETT-----SCEEEE--CGGGEEEBSSCCS
T ss_pred ccEEeEEEEEEEEecC---------CCCcceeeeEEEECCccCCCceEEEEEeC-----CCccee--cCceEEEEEEccc
Confidence 3467889998887553 234568888888875 6799999964 344555 4567888765554
Q ss_pred cCCCCCCCCCCCCCcCc-HHHHHHHHhcCCCCCCccccccccccccCCCCCCcEEEEecCCCCCceEEEEEEeEeCCeEE
Q psy6234 81 RGKPLIPPRTIETKYSD-WKDFLVKRLTGARTLPSNFYHKVQESVKSRFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQ 159 (260)
Q Consensus 81 ~g~~L~pP~~~~~~~~~-W~~~L~~~~~~~~~~P~~~f~~~~~~~~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~ 159 (260)
+-..-.++.. ..+ .++||++ -| +.+--++++||++.+ .....-+-|||.+|.+..+.
T Consensus 130 ~vW~di~~~~----~r~FIk~YL~~-------yP--------~rpmv~~~~GQ~i~~---E~~g~w~~~~V~~vD~SLv~ 187 (213)
T 3dlm_A 130 KTWEDIEDIS----CRDFIEEYVTA-------YP--------NRPMVLLKSGQLIKT---EWEGTWWKSRVEEVDGSLVR 187 (213)
T ss_dssp SGGGGCSCHH----HHHHHHHHHHH-------TT--------CCCCCCCCTTCEEEE---EETTEEEEEEEEEEETTEEE
T ss_pred chhhhcCcch----hHHHHHHHHHh-------CC--------CCceEEcCCCCEEEE---EecCcEEEEEEEEEcceeEE
Confidence 4333222210 011 4556543 11 122345899999888 23467789999999999999
Q ss_pred EEEecCCCCEEEEcCCCCceec
Q psy6234 160 VHYYDDDDGFCCHQDSPLIHPV 181 (260)
Q Consensus 160 v~~~~~~~~~w~~~~S~~I~Pv 181 (260)
|+|.+++..-|+.-.|.+|.|.
T Consensus 188 v~f~~dkr~EWIYRGS~Rl~pl 209 (213)
T 3dlm_A 188 ILFLDDKRCEWIYRGSTRLEPM 209 (213)
T ss_dssp EEETTTTEEEEEETTCTTBCC-
T ss_pred EEEcCCCeeEEEEcCCccchhc
Confidence 9999988889999999999986
No 26
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.25 E-value=0.033 Score=40.60 Aligned_cols=59 Identities=15% Similarity=0.171 Sum_probs=47.2
Q ss_pred cCCCCCCcEEEEecCC--CCCceEEEEEEeEeC----CeEEEEEec--CCCCEEEEcCCCCceechh
Q psy6234 125 KSRFRVDMNLEVVDKK--RISQVKVATIEKIVG----KRLQVHYYD--DDDGFCCHQDSPLIHPVGW 183 (260)
Q Consensus 125 ~~~F~vGmkLEavD~~--~~~~i~vAtV~~v~g----~rl~v~~~~--~~~~~w~~~~S~~I~PvGw 183 (260)
...|.+|.||.+.... ....++.|+|.++-. ..|.|||.| ...|-|+..+.-++-.+.|
T Consensus 7 ~~~~~vG~kv~v~~~~~~~~~~~y~AkIl~i~~~~~~~~YyVHY~g~NkRlDEWV~~~rl~~~~~~~ 73 (87)
T 2eko_A 7 GGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNRRLDEWVTHERLDLKKIQF 73 (87)
T ss_dssp SCSCCTTCEEEBCEECTTCCEECCEEEEEEECCSSSCCCEEEEECSSCSCCCEEECTTTBCGGGCCC
T ss_pred cccccCCCEEEEEEcccCCCCeEEEEEEEEEEEcCCCcEEEEEeCCCCcccccccCHhHcccccccC
Confidence 4679999999999852 456889999998874 369999999 5689999998877765543
No 27
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=94.28 E-value=0.092 Score=39.31 Aligned_cols=47 Identities=13% Similarity=0.109 Sum_probs=38.9
Q ss_pred cCCCCCCcEEEEecCCCCCceEEEEEEeEe----CCeEEEEEec--CCCCEEEEcC
Q psy6234 125 KSRFRVDMNLEVVDKKRISQVKVATIEKIV----GKRLQVHYYD--DDDGFCCHQD 174 (260)
Q Consensus 125 ~~~F~vGmkLEavD~~~~~~i~vAtV~~v~----g~rl~v~~~~--~~~~~w~~~~ 174 (260)
...|.+|.++.+.+ -..++.|.|+++. +..|.|||.| ...|-|+..+
T Consensus 20 ~~~f~vGekVl~~~---~~~~YeAkIl~v~~~~~~~~Y~VHY~GwNkR~DEWV~~~ 72 (102)
T 2f5k_A 20 KPKFQEGERVLCFH---GPLLYEAKCVKVAIKDKQVKYFIHYSGWNKNWDEWVPES 72 (102)
T ss_dssp SCSCCTTCEEEEES---SSSEEEEEEEEEEEETTEEEEEEEETTSCGGGCEEEEGG
T ss_pred CcccCCCCEEEEEE---CCEEEEEEEEEEEEcCCCcEEEEEeCCcCCCceeeccHh
Confidence 45799999999988 3689999999887 2368999999 5679999853
No 28
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=94.07 E-value=0.087 Score=37.30 Aligned_cols=51 Identities=16% Similarity=0.123 Sum_probs=40.3
Q ss_pred CCCCCCcEEEEecCC-CCCceEEEEEEeEeCC----eEEEEEec--CCCCEEEEcCCC
Q psy6234 126 SRFRVDMNLEVVDKK-RISQVKVATIEKIVGK----RLQVHYYD--DDDGFCCHQDSP 176 (260)
Q Consensus 126 ~~F~vGmkLEavD~~-~~~~i~vAtV~~v~g~----rl~v~~~~--~~~~~w~~~~S~ 176 (260)
..|.+|.++.+.... ....+..|.|.++-.. .+.|||.| ...|-|+..++-
T Consensus 4 ~~~~vGekV~~~~~d~k~~~~y~AkIl~i~~~~~~~~Y~VHY~gwnkr~DEWV~~~ri 61 (76)
T 2lcc_A 4 EPCLTGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGWNVRYDEWVKADRI 61 (76)
T ss_dssp CCSSTTCEEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEETTSCCSSCEEEEGGGE
T ss_pred cccCCCCEEEEEeCCCCCCCEEEEEEEEEEccCCceEEEEEeCCcCCCceEecChhhc
Confidence 469999999999874 2357899999987732 58999999 678999987653
No 29
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.85 E-value=0.31 Score=35.37 Aligned_cols=67 Identities=16% Similarity=0.219 Sum_probs=49.5
Q ss_pred ccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeC----CEEEEEEcccCCCCCCCeeeeCCCCCeecccchhc
Q psy6234 5 WENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAG----YKALLRYEGFGEDSSKDFWVNLCSSMVHPVGWCAT 80 (260)
Q Consensus 5 ~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G----~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvGw~~~ 80 (260)
-..|++|.+|.|...... .-..+.-|+|+++-. ....+||.|+. ...|=|+..+.-++..+.|-..
T Consensus 7 ~~~~~vG~kv~v~~~~~~--------~~~~~y~AkIl~i~~~~~~~~YyVHY~g~N--kRlDEWV~~~rl~~~~~~~p~~ 76 (87)
T 2eko_A 7 GGEIIEGCRLPVLRRNQD--------NEDEWPLAEILSVKDISGRKLFYVHYIDFN--RRLDEWVTHERLDLKKIQFPKK 76 (87)
T ss_dssp SCSCCTTCEEEBCEECTT--------CCEECCEEEEEEECCSSSCCCEEEEECSSC--SCCCEEECTTTBCGGGCCCCCC
T ss_pred cccccCCCEEEEEEcccC--------CCCeEEEEEEEEEEEcCCCcEEEEEeCCCC--cccccccCHhHcccccccCCCC
Confidence 467999999999752100 113467899999873 46889999996 6899999998888877776543
Q ss_pred c
Q psy6234 81 R 81 (260)
Q Consensus 81 ~ 81 (260)
.
T Consensus 77 ~ 77 (87)
T 2eko_A 77 E 77 (87)
T ss_dssp S
T ss_pred C
Confidence 3
No 30
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=91.69 E-value=0.46 Score=37.15 Aligned_cols=53 Identities=11% Similarity=0.068 Sum_probs=42.3
Q ss_pred cCCCCCCcEEEEecCCCCCceEEEEEEeEe-----C-CeEEEEEec--CCCCEEEEcCCCCce
Q psy6234 125 KSRFRVDMNLEVVDKKRISQVKVATIEKIV-----G-KRLQVHYYD--DDDGFCCHQDSPLIH 179 (260)
Q Consensus 125 ~~~F~vGmkLEavD~~~~~~i~vAtV~~v~-----g-~rl~v~~~~--~~~~~w~~~~S~~I~ 179 (260)
...|.+|.++-+.+. ...++.|+|+++. | ..|.|||.| ...|-|+..+.-.+-
T Consensus 10 ~~~~~vGe~v~~~~~--d~~~y~AkIl~i~~~~~~~~~~YyVHY~gwNkR~DEWV~~~ri~~~ 70 (133)
T 1wgs_A 10 EVTVEIGETYLCRRP--DSTWHSAEVIQSRVNDQEGREEFYVHYVGFNRRLDEWVDKNRLALT 70 (133)
T ss_dssp CCCCCTTSEEEEEET--TTEEEEEEEEEEEEETTTTEEEEEEECTTTCSSCCEEECTTTSCCT
T ss_pred ccccCCCCEEEEEeC--CCCEEEEEEEEEEeccCCCceEEEEeccCcCCCceeecChhhcccc
Confidence 346999999999986 3589999999877 2 258999999 678999998766543
No 31
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=91.52 E-value=0.72 Score=33.72 Aligned_cols=51 Identities=16% Similarity=0.105 Sum_probs=41.0
Q ss_pred cCCCCCCcEEEEecCCCCCceEEEEEEeEeC----CeEEEEEec--CCCCEEEEcCCCCc
Q psy6234 125 KSRFRVDMNLEVVDKKRISQVKVATIEKIVG----KRLQVHYYD--DDDGFCCHQDSPLI 178 (260)
Q Consensus 125 ~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g----~rl~v~~~~--~~~~~w~~~~S~~I 178 (260)
...|.+|.++-+.. -..++.|+|+++-. ..|.|||.| ...|-|+..+.-.+
T Consensus 21 ~~~~~vG~kv~v~~---~~~~y~AkIl~ir~~~~~~~YyVHY~g~NkRlDEWV~~~rl~l 77 (92)
T 2ro0_A 21 VDDIIIKCQCWVQK---NDEERLAEILSINTRKAPPKFYVHYVNYNKRLDEWITTDRINL 77 (92)
T ss_dssp TTSCCTTCEEEEEE---TTEEEEEEEEEEECSSSSCEEEEEETTSCTTSCEEEEGGGEET
T ss_pred cccccCCCEEEEEE---CCEEEEEEEEEEEEcCCCcEEEEEeCCcCcccccccCHhHccc
Confidence 35799999999985 46899999998873 468999999 56899999765433
No 32
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=91.36 E-value=0.53 Score=32.39 Aligned_cols=37 Identities=16% Similarity=0.268 Sum_probs=32.9
Q ss_pred CCCCCCcEEEEecCCCCCceEEEEEEeEeCC-eEEEEEec
Q psy6234 126 SRFRVDMNLEVVDKKRISQVKVATIEKIVGK-RLQVHYYD 164 (260)
Q Consensus 126 ~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~-rl~v~~~~ 164 (260)
..|++|.++-|.= .-....+|+|++|.+. .+.|.|++
T Consensus 5 ~~~~vGd~vmArW--~D~~yYpA~I~si~~~~~Y~V~F~d 42 (67)
T 3p8d_A 5 SEFQINEQVLACW--SDCRFYPAKVTAVNKDGTYTVKFYD 42 (67)
T ss_dssp CCCCTTCEEEEEC--TTSCEEEEEEEEECTTSEEEEEETT
T ss_pred cccccCCEEEEEc--CCCCEeeEEEEEECCCCeEEEEEeC
Confidence 4799999999994 7789999999999985 78999987
No 33
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=91.31 E-value=0.47 Score=34.19 Aligned_cols=38 Identities=16% Similarity=0.262 Sum_probs=32.5
Q ss_pred cCCCCCCcEEEEecCCCCCceEEEEEEeEeCC-eEEEEEec
Q psy6234 125 KSRFRVDMNLEVVDKKRISQVKVATIEKIVGK-RLQVHYYD 164 (260)
Q Consensus 125 ~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~-rl~v~~~~ 164 (260)
...|++|.++.|.= .-..+.+|+|++|.+. .|.|.|+|
T Consensus 19 ~~~f~vGd~VlArW--~D~~yYPAkI~sV~~~~~YtV~F~D 57 (85)
T 3qii_A 19 SSEFQINEQVLACW--SDCRFYPAKVTAVNKDGTYTVKFYD 57 (85)
T ss_dssp --CCCTTCEEEEEC--TTSCEEEEEEEEECTTSEEEEEETT
T ss_pred CcccccCCEEEEEe--CCCCEeeEEEEEECCCCeEEEEEeC
Confidence 35799999999987 6689999999999985 78999987
No 34
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=90.81 E-value=1.3 Score=29.37 Aligned_cols=45 Identities=18% Similarity=0.158 Sum_probs=34.4
Q ss_pred CCCCCCcEEEEecCCCCCceEEEEEEeEeCC--eEEEEEecCCCCEEEEc
Q psy6234 126 SRFRVDMNLEVVDKKRISQVKVATIEKIVGK--RLQVHYYDDDDGFCCHQ 173 (260)
Q Consensus 126 ~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~--rl~v~~~~~~~~~w~~~ 173 (260)
.+|++|..+=|-... ++++++||++|... +.+|+|.|.+ .+|+..
T Consensus 2 ~~f~~GedVLarwsD--G~fYlGtI~~V~~~~~~clV~F~D~s-~~W~~~ 48 (58)
T 4hcz_A 2 PRLWEGQDVLARWTD--GLLYLGTIKKVDSAREVCLVQFEDDS-QFLVLW 48 (58)
T ss_dssp CSCCTTCEEEEECTT--SCEEEEEEEEEETTTTEEEEEETTSC-EEEEEG
T ss_pred CccccCCEEEEEecC--CCEEeEEEEEEecCCCEEEEEEcCCC-eEEEEh
Confidence 468999887665444 89999999998854 7899997733 577764
No 35
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=90.58 E-value=0.55 Score=34.98 Aligned_cols=50 Identities=4% Similarity=0.078 Sum_probs=39.6
Q ss_pred cCCCCCCcEEEEecC--CCCCceEEEEEEeEeC---------CeEEEEEec--CCCCEEEEcC
Q psy6234 125 KSRFRVDMNLEVVDK--KRISQVKVATIEKIVG---------KRLQVHYYD--DDDGFCCHQD 174 (260)
Q Consensus 125 ~~~F~vGmkLEavD~--~~~~~i~vAtV~~v~g---------~rl~v~~~~--~~~~~w~~~~ 174 (260)
...|++|.++-+..+ ..-..++-|.|++|.. ..|+|||.| .+.|-|+-.+
T Consensus 17 ~~~f~~GEkVLc~h~d~~kg~~lYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn~rwDEWV~ed 79 (101)
T 3m9q_A 17 TPLFHKGEIVLCYEPDKSKARVLYTSKVLNVFERRNEHGLRFYEYKIHFQGWRPSYDRAVRAT 79 (101)
T ss_dssp CCCCCTTCEEEEECCCTTSCCCEEEEEEEEEEEEECTTSCEEEEEEEEETTSCGGGCEEECGG
T ss_pred CCcccCCCEEEEEecCCCCCCcceEeEEEEEEecCCccccCceEEEEEeCCCCcCceeecCHH
Confidence 457999999999884 3345789999999874 268999999 5678998754
No 36
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=90.40 E-value=0.55 Score=35.03 Aligned_cols=47 Identities=21% Similarity=0.354 Sum_probs=38.2
Q ss_pred cCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEe----CCEEEEEEcccCCCCCCCeeeeC
Q psy6234 6 ENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIA----GYKALLRYEGFGEDSSKDFWVNL 67 (260)
Q Consensus 6 ~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~----G~rl~lr~~G~~~d~~~dfW~~~ 67 (260)
..|++|.++.+... ....-|+|+++. +...+|||.||. .+.|=|+..
T Consensus 21 ~~f~vGekVl~~~~-------------~~~YeAkIl~v~~~~~~~~Y~VHY~GwN--kR~DEWV~~ 71 (102)
T 2f5k_A 21 PKFQEGERVLCFHG-------------PLLYEAKCVKVAIKDKQVKYFIHYSGWN--KNWDEWVPE 71 (102)
T ss_dssp CSCCTTCEEEEESS-------------SSEEEEEEEEEEEETTEEEEEEEETTSC--GGGCEEEEG
T ss_pred cccCCCCEEEEEEC-------------CEEEEEEEEEEEEcCCCcEEEEEeCCcC--CCceeeccH
Confidence 56999999999742 358899999987 446899999996 478999883
No 37
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=89.97 E-value=0.59 Score=32.90 Aligned_cols=55 Identities=25% Similarity=0.337 Sum_probs=41.0
Q ss_pred ccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEe---C-CEEEEEEcccCCCCCCCeeeeCCCC
Q psy6234 5 WENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIA---G-YKALLRYEGFGEDSSKDFWVNLCSS 70 (260)
Q Consensus 5 ~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~---G-~rl~lr~~G~~~d~~~dfW~~~~s~ 70 (260)
.+.|++|.++.+...+. ......-|+|+++- | ...++||.|+. .+.|=|+..+.-
T Consensus 3 ~~~~~vGekV~~~~~d~---------k~~~~y~AkIl~i~~~~~~~~Y~VHY~gwn--kr~DEWV~~~ri 61 (76)
T 2lcc_A 3 MEPCLTGTKVKVKYGRG---------KTQKIYEASIKSTEIDDGEVLYLVHYYGWN--VRYDEWVKADRI 61 (76)
T ss_dssp CCCSSTTCEEEEEEEET---------TEEEEEEEEEEEEEEETTEEEEEEEETTSC--CSSCEEEEGGGE
T ss_pred ccccCCCCEEEEEeCCC---------CCCCEEEEEEEEEEccCCceEEEEEeCCcC--CCceEecChhhc
Confidence 46799999999986420 11357899999987 2 24789999996 578999986543
No 38
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=89.79 E-value=2.1 Score=29.35 Aligned_cols=47 Identities=9% Similarity=0.157 Sum_probs=37.5
Q ss_pred ccCCCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEEEecCCCCEEEEc
Q psy6234 124 VKSRFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVHYYDDDDGFCCHQ 173 (260)
Q Consensus 124 ~~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~~~~~~~~~w~~~ 173 (260)
+...|.+|+-+=+- .+-++++.+||++...++.+|+|+|.+ .+||..
T Consensus 12 pa~~~~~geDVL~r--w~DG~fYLGtIVd~~~~~ClV~FeD~S-~~Wv~~ 58 (69)
T 2xk0_A 12 PAVTYALQEDVFIK--CNDGRFYLGTIIDQTSDQYLIRFDDQS-EQWCEP 58 (69)
T ss_dssp CCCCCCTTCEEEEE--CTTSCEEEEEEEEECSSCEEEEETTCC-EEEECT
T ss_pred cccccccCCeEEEE--ecCCCEEEEEEEecCCceEEEEecCCc-ceeeeH
Confidence 34789999987665 444999999999999999999998733 578764
No 39
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=89.74 E-value=1.7 Score=31.89 Aligned_cols=50 Identities=16% Similarity=0.119 Sum_probs=40.6
Q ss_pred CCCCCCcEEEEecCCCCCceEEEEEEeEeC----CeEEEEEec--CCCCEEEEcCCCCc
Q psy6234 126 SRFRVDMNLEVVDKKRISQVKVATIEKIVG----KRLQVHYYD--DDDGFCCHQDSPLI 178 (260)
Q Consensus 126 ~~F~vGmkLEavD~~~~~~i~vAtV~~v~g----~rl~v~~~~--~~~~~w~~~~S~~I 178 (260)
..|.+|.++=+.. -..++.|+|+++-. ..|.|||.| ...|-|+..+.-++
T Consensus 24 ~~~~vG~kv~v~~---~~~~yeAeIl~ir~~~g~~~YYVHY~g~NkRlDEWV~~~RI~l 79 (94)
T 2rnz_A 24 DDIIIKCQCWVQK---NDEERLAEILSINTRKAPPKFYVHYVNYNKRLDEWITTDRINL 79 (94)
T ss_dssp GGCCTTEEEEEEC---SSCEEEEEEEEEECSSSSCEEEEECTTSCSTTCEEEETTTBCS
T ss_pred ccccCCCEEEEEE---CCEEEEEEEEEEEEcCCCcEEEEEeCCcCcccccccCHHHccc
Confidence 4699999999985 46899999998873 368999999 56899999866543
No 40
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=89.71 E-value=1.5 Score=32.07 Aligned_cols=53 Identities=17% Similarity=0.255 Sum_probs=41.7
Q ss_pred ccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEe----CCEEEEEEcccCCCCCCCeeeeCCCCCe
Q psy6234 5 WENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIA----GYKALLRYEGFGEDSSKDFWVNLCSSMV 72 (260)
Q Consensus 5 ~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~----G~rl~lr~~G~~~d~~~dfW~~~~s~~i 72 (260)
-..|.+|.++-+.. + ..+.-|+|+++. +....+||.|+. .+.|=|+..+.-++
T Consensus 21 ~~~~~vG~kv~v~~-~------------~~~y~AkIl~ir~~~~~~~YyVHY~g~N--kRlDEWV~~~rl~l 77 (92)
T 2ro0_A 21 VDDIIIKCQCWVQK-N------------DEERLAEILSINTRKAPPKFYVHYVNYN--KRLDEWITTDRINL 77 (92)
T ss_dssp TTSCCTTCEEEEEE-T------------TEEEEEEEEEEECSSSSCEEEEEETTSC--TTSCEEEEGGGEET
T ss_pred cccccCCCEEEEEE-C------------CEEEEEEEEEEEEcCCCcEEEEEeCCcC--cccccccCHhHccc
Confidence 35689999999984 2 358899999987 367899999996 68899998765433
No 41
>3oa6_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3ob9_A*
Probab=89.29 E-value=0.87 Score=34.41 Aligned_cols=51 Identities=12% Similarity=0.176 Sum_probs=40.0
Q ss_pred ccCCCCCCcEEEEecCCC--CCceEEEEEEeEe---CC------eEEEEEec--CCCCEEEEcC
Q psy6234 124 VKSRFRVDMNLEVVDKKR--ISQVKVATIEKIV---GK------RLQVHYYD--DDDGFCCHQD 174 (260)
Q Consensus 124 ~~~~F~vGmkLEavD~~~--~~~i~vAtV~~v~---g~------rl~v~~~~--~~~~~w~~~~ 174 (260)
++..|.+|.+|=+..+.. ..+++-|.|++|. +. .|+|||.| ...|-|+..+
T Consensus 16 ~k~~F~~gEkVLc~h~d~~kg~llYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn~~WDEWV~~d 79 (110)
T 3oa6_A 16 MKFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWNRSWDRWAAED 79 (110)
T ss_dssp --CCSCTTCEEEEECSCTTSCCCEEEEEEEEEEEEECTTCCEEEEEEEEETTSCGGGCEEEEGG
T ss_pred CCcccCCCCEEEEEecCCCCCcccEEEEEEEEEeccCCcCCcccEEEEEECCcCcchhhccChh
Confidence 456899999999988665 4589999999885 11 49999999 6789999765
No 42
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=88.26 E-value=1.2 Score=34.81 Aligned_cols=53 Identities=23% Similarity=0.372 Sum_probs=41.6
Q ss_pred cCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEe-----C-CEEEEEEcccCCCCCCCeeeeCCCCCe
Q psy6234 6 ENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIA-----G-YKALLRYEGFGEDSSKDFWVNLCSSMV 72 (260)
Q Consensus 6 ~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~-----G-~rl~lr~~G~~~d~~~dfW~~~~s~~i 72 (260)
..|.+|.++.+...+ ..+.-|+|+++. | ....|||.||. .+.|=|+..+.-++
T Consensus 11 ~~~~vGe~v~~~~~d------------~~~y~AkIl~i~~~~~~~~~~YyVHY~gwN--kR~DEWV~~~ri~~ 69 (133)
T 1wgs_A 11 VTVEIGETYLCRRPD------------STWHSAEVIQSRVNDQEGREEFYVHYVGFN--RRLDEWVDKNRLAL 69 (133)
T ss_dssp CCCCTTSEEEEEETT------------TEEEEEEEEEEEEETTTTEEEEEEECTTTC--SSCCEEECTTTSCC
T ss_pred cccCCCCEEEEEeCC------------CCEEEEEEEEEEeccCCCceEEEEeccCcC--CCceeecChhhccc
Confidence 468999999998642 358899999976 2 45889999996 58999998866543
No 43
>2lrq_A Protein MRG15, NUA4 complex subunit EAF3 homolog; epigenetics, LID complex, transcription; NMR {Drosophila melanogaster}
Probab=87.91 E-value=0.094 Score=37.94 Aligned_cols=47 Identities=11% Similarity=0.047 Sum_probs=37.3
Q ss_pred cCCCCCCcEEEEecCCCCCceEEEEEEeEe----CCeEEEEEec--CCCCEEEEcC
Q psy6234 125 KSRFRVDMNLEVVDKKRISQVKVATIEKIV----GKRLQVHYYD--DDDGFCCHQD 174 (260)
Q Consensus 125 ~~~F~vGmkLEavD~~~~~~i~vAtV~~v~----g~rl~v~~~~--~~~~~w~~~~ 174 (260)
+..|.+|.++.+.+. ..++.|.|.++- ...|.|||.| ...|-|+..+
T Consensus 10 ~~~~~~Gekv~~~~~---~~~y~AkIl~i~~~~~~~~YyVHY~GwNkR~DEWV~~~ 62 (85)
T 2lrq_A 10 NTLFVDGERVLCFHG---PLIYEAKVLKTKPDATPVEYYIHYAGWSKNWDEWVPEN 62 (85)
Confidence 457999999999884 366999999887 2368999998 5678898854
No 44
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.04 E-value=1.2 Score=31.09 Aligned_cols=38 Identities=21% Similarity=0.201 Sum_probs=32.6
Q ss_pred cCCCCCCcEEEEecCCCCCceEEEEEEeEeC-CeEEEEEec
Q psy6234 125 KSRFRVDMNLEVVDKKRISQVKVATIEKIVG-KRLQVHYYD 164 (260)
Q Consensus 125 ~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g-~rl~v~~~~ 164 (260)
...|++|.++.|.=. -...+.|+|.++.+ +.+.|.|++
T Consensus 7 ~~~~kvGd~clA~ws--Dg~~Y~A~I~~v~~~~~~~V~f~D 45 (74)
T 2equ_A 7 GFDFKAGEEVLARWT--DCRYYPAKIEAINKEGTFTVQFYD 45 (74)
T ss_dssp CCCCCTTCEEEEECS--SSSEEEEEEEEESTTSSEEEEETT
T ss_pred CCCCCCCCEEEEECC--CCCEEEEEEEEECCCCEEEEEEec
Confidence 357999999999965 57899999999987 678999976
No 45
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=86.71 E-value=2.3 Score=31.60 Aligned_cols=55 Identities=18% Similarity=0.199 Sum_probs=40.4
Q ss_pred ccccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeC---------CEEEEEEcccCCCCCCCeeeeC
Q psy6234 3 DCWENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAG---------YKALLRYEGFGEDSSKDFWVNL 67 (260)
Q Consensus 3 ~~~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G---------~rl~lr~~G~~~d~~~dfW~~~ 67 (260)
+--..|++|.++-+...|.. .-..+.-|+|+++-. ...+|||.||. .+.|=|+..
T Consensus 15 ~~~~~f~~GEkVLc~h~d~~--------kg~~lYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn--~rwDEWV~e 78 (101)
T 3m9q_A 15 DETPLFHKGEIVLCYEPDKS--------KARVLYTSKVLNVFERRNEHGLRFYEYKIHFQGWR--PSYDRAVRA 78 (101)
T ss_dssp CCCCCCCTTCEEEEECCCTT--------SCCCEEEEEEEEEEEEECTTSCEEEEEEEEETTSC--GGGCEEECG
T ss_pred cCCCcccCCCEEEEEecCCC--------CCCcceEeEEEEEEecCCccccCceEEEEEeCCCC--cCceeecCH
Confidence 44567999999999864321 124578899999863 36889999996 478899754
No 46
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=85.93 E-value=1.6 Score=29.36 Aligned_cols=46 Identities=9% Similarity=0.071 Sum_probs=34.2
Q ss_pred cCCCCCCcEEEEecCCCCCceEEEEEEeEe--CCeEEEEEecCCCCEEEEc
Q psy6234 125 KSRFRVDMNLEVVDKKRISQVKVATIEKIV--GKRLQVHYYDDDDGFCCHQ 173 (260)
Q Consensus 125 ~~~F~vGmkLEavD~~~~~~i~vAtV~~v~--g~rl~v~~~~~~~~~w~~~ 173 (260)
..+|++|+-+=| ...-.+++++||++|. ..+.+|+|.|+ ..||.+.
T Consensus 5 ~~~f~eGqdVLa--rWsDGlfYlgtV~kV~~~~~~ClV~FeD~-s~~wv~~ 52 (63)
T 2e5q_A 5 SSGLTEGQYVLC--RWTDGLYYLGKIKRVSSSKQSCLVTFEDN-SKYWVLW 52 (63)
T ss_dssp CCCCCTTCEEEE--ECTTSCEEEEEECCCCSTTSEEEEEETTS-CEEEEEG
T ss_pred ccceecCCEEEE--EecCCCEEEEEEEEEecCCCEEEEEEccC-ceeEEEe
Confidence 357999998744 3445899999999999 45788888763 3577764
No 47
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=85.75 E-value=2.9 Score=30.60 Aligned_cols=53 Identities=17% Similarity=0.255 Sum_probs=41.7
Q ss_pred ccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEe----CCEEEEEEcccCCCCCCCeeeeCCCCCe
Q psy6234 5 WENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIA----GYKALLRYEGFGEDSSKDFWVNLCSSMV 72 (260)
Q Consensus 5 ~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~----G~rl~lr~~G~~~d~~~dfW~~~~s~~i 72 (260)
-..|++|.++-|.. + ..+.-|+|+++. +....+||.|+. ...|=|+..+.-++
T Consensus 23 ~~~~~vG~kv~v~~-~------------~~~yeAeIl~ir~~~g~~~YYVHY~g~N--kRlDEWV~~~RI~l 79 (94)
T 2rnz_A 23 VDDIIIKCQCWVQK-N------------DEERLAEILSINTRKAPPKFYVHYVNYN--KRLDEWITTDRINL 79 (94)
T ss_dssp GGGCCTTEEEEEEC-S------------SCEEEEEEEEEECSSSSCEEEEECTTSC--STTCEEEETTTBCS
T ss_pred cccccCCCEEEEEE-C------------CEEEEEEEEEEEEcCCCcEEEEEeCCcC--cccccccCHHHccc
Confidence 35689999999973 1 357899999987 357889999995 68899998876544
No 48
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=85.33 E-value=4.4 Score=26.86 Aligned_cols=45 Identities=18% Similarity=0.298 Sum_probs=35.5
Q ss_pred CcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEe--CCEEEEEEcccCCCCCCCeeeeCC
Q psy6234 7 NISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIA--GYKALLRYEGFGEDSSKDFWVNLC 68 (260)
Q Consensus 7 ~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~--G~rl~lr~~G~~~d~~~dfW~~~~ 68 (260)
.|++|..+-+.-.| ..|..+||++|- +.+-+++|+. ...||+...
T Consensus 3 ~f~~GedVLarwsD------------G~fYlGtI~~V~~~~~~clV~F~D-----~s~~W~~~k 49 (58)
T 4hcz_A 3 RLWEGQDVLARWTD------------GLLYLGTIKKVDSAREVCLVQFED-----DSQFLVLWK 49 (58)
T ss_dssp SCCTTCEEEEECTT------------SCEEEEEEEEEETTTTEEEEEETT-----SCEEEEEGG
T ss_pred ccccCCEEEEEecC------------CCEEeEEEEEEecCCCEEEEEEcC-----CCeEEEEhH
Confidence 58899999987654 469999999986 5689999964 347998754
No 49
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=84.00 E-value=3.2 Score=29.12 Aligned_cols=47 Identities=17% Similarity=0.185 Sum_probs=35.9
Q ss_pred cCCCCCCcEEEEecCCCCCceEEEEEEeEe--CCeEEEEEecCCCCEEEEcC
Q psy6234 125 KSRFRVDMNLEVVDKKRISQVKVATIEKIV--GKRLQVHYYDDDDGFCCHQD 174 (260)
Q Consensus 125 ~~~F~vGmkLEavD~~~~~~i~vAtV~~v~--g~rl~v~~~~~~~~~w~~~~ 174 (260)
..+|.+|+-+= -..+-++++.+||++|. +.+.+|+|+|. ..||+...
T Consensus 24 ~~~f~eGeDVL--arwsDGlfYLGTI~kV~~~~e~ClV~F~D~-S~~W~~~k 72 (79)
T 2m0o_A 24 RPRLWEGQDVL--ARWTDGLLYLGTIKKVDSAREVCLVQFEDD-SQFLVLWK 72 (79)
T ss_dssp CCCCCTTCEEE--BCCTTSCCCEEEEEEEETTTTEEEEEETTS-CEEEEETT
T ss_pred cceeccCCEEE--EEecCCCEEeEEEEEeccCCCEEEEEEcCC-CeEEEEee
Confidence 46799998654 44556899999999998 56899999773 35888753
No 50
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=83.55 E-value=2.1 Score=35.43 Aligned_cols=34 Identities=12% Similarity=0.097 Sum_probs=27.9
Q ss_pred CCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEEEe
Q psy6234 127 RFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVHYY 163 (260)
Q Consensus 127 ~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~~~ 163 (260)
..++||++++.++.- ..+++|++|.+.++.|-|.
T Consensus 89 ~~~~G~~~~~~~~~G---~~~~~V~~v~~~~V~vD~N 122 (196)
T 2kfw_A 89 ELQVGMRFLAETDQG---PVPVEITAVEDDHVVVDGN 122 (196)
T ss_dssp CCCTTCEEEEEETTE---EEEEEBCCCCSSSEEECCC
T ss_pred CcccCCEEEEECCCC---cEEEEEEEEcCCEEEEeCC
Confidence 478999999987764 5789999999998887553
No 51
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=83.46 E-value=3.5 Score=28.14 Aligned_cols=46 Identities=17% Similarity=0.125 Sum_probs=34.3
Q ss_pred cCCCCCCcEEEEecCCCCCceEEEEEEeEeC--CeEEEEEecCCCCEEEEc
Q psy6234 125 KSRFRVDMNLEVVDKKRISQVKVATIEKIVG--KRLQVHYYDDDDGFCCHQ 173 (260)
Q Consensus 125 ~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g--~rl~v~~~~~~~~~w~~~ 173 (260)
..+|++|+-+=|-. .-.+++++||++|.. .+.+|+|.|+ ..||...
T Consensus 7 ~~~f~eGqdVLarW--sDGlfYlGtV~kV~~~~~~ClV~FeD~-s~~wv~~ 54 (68)
T 2e5p_A 7 GPRLWEGQDVLARW--TDGLLYLGTIKKVDSAREVCLVQFEDD-SQFLVLW 54 (68)
T ss_dssp CCCCCTTCEEEEEC--TTSSEEEEEEEEEETTTTEEEEEETTT-EEEEEET
T ss_pred CcccccCCEEEEEe--cCCcEEEeEEEEEecCCcEEEEEEccC-Ceeeeee
Confidence 35799999874433 348999999999994 5788888763 3577765
No 52
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=83.08 E-value=4.5 Score=27.73 Aligned_cols=46 Identities=13% Similarity=0.354 Sum_probs=36.6
Q ss_pred cCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEEcccCCCCCCCeeeeCC
Q psy6234 6 ENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRYEGFGEDSSKDFWVNLC 68 (260)
Q Consensus 6 ~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~~G~~~d~~~dfW~~~~ 68 (260)
..|++|.-+-+.-.| ..|..+||++..-.+-++||+. ...||+...
T Consensus 14 ~~~~~geDVL~rw~D------------G~fYLGtIVd~~~~~ClV~FeD-----~S~~Wv~~k 59 (69)
T 2xk0_A 14 VTYALQEDVFIKCND------------GRFYLGTIIDQTSDQYLIRFDD-----QSEQWCEPD 59 (69)
T ss_dssp CCCCTTCEEEEECTT------------SCEEEEEEEEECSSCEEEEETT-----CCEEEECTT
T ss_pred cccccCCeEEEEecC------------CCEEEEEEEecCCceEEEEecC-----CcceeeeHH
Confidence 467888888876442 6799999999999999999965 357998654
No 53
>3oa6_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3ob9_A*
Probab=82.80 E-value=3.2 Score=31.23 Aligned_cols=52 Identities=19% Similarity=0.308 Sum_probs=38.5
Q ss_pred CcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEe---C------CEEEEEEcccCCCCCCCeeeeCC
Q psy6234 7 NISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIA---G------YKALLRYEGFGEDSSKDFWVNLC 68 (260)
Q Consensus 7 ~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~---G------~rl~lr~~G~~~d~~~dfW~~~~ 68 (260)
.|++|.+|-+...+.. ....++=|.|+++- + ..-+|||.||. .+.|=|+..+
T Consensus 19 ~F~~gEkVLc~h~d~~--------kg~llYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn--~~WDEWV~~d 79 (110)
T 3oa6_A 19 KFHSGEKVLCFEPDPT--------KARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWN--RSWDRWAAED 79 (110)
T ss_dssp CSCTTCEEEEECSCTT--------SCCCEEEEEEEEEEEEECTTCCEEEEEEEEETTSC--GGGCEEEEGG
T ss_pred ccCCCCEEEEEecCCC--------CCcccEEEEEEEEEeccCCcCCcccEEEEEECCcC--cchhhccChh
Confidence 5999999999865411 23468899999985 1 25889999997 4789998643
No 54
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=82.78 E-value=4 Score=32.93 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=28.2
Q ss_pred CCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEEE
Q psy6234 127 RFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVHY 162 (260)
Q Consensus 127 ~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~~ 162 (260)
..++||.+++.++. ....+++|++|.++++.|-|
T Consensus 112 ~~~~G~~~~~~~~~--G~~~~~~V~~v~~~~V~vD~ 145 (169)
T 4dt4_A 112 EPEIGAIMLFTAMD--GSEMPGVIREINGDSITVDF 145 (169)
T ss_dssp CCCTTCEEEEECTT--SCEEEEEEEEEETTEEEEEC
T ss_pred CCCCCcEEEEECCC--CCEEEEEEEEEcCCEEEEeC
Confidence 47899999998865 56788999999999887744
No 55
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=82.63 E-value=2.9 Score=33.78 Aligned_cols=33 Identities=12% Similarity=0.130 Sum_probs=27.5
Q ss_pred CCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEEE
Q psy6234 127 RFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVHY 162 (260)
Q Consensus 127 ~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~~ 162 (260)
..++||.+++.++.- . .+++|++|.+.++.|-|
T Consensus 89 ~~~~G~~~~~~~~~G--~-~~~~V~~v~~~~V~vD~ 121 (171)
T 2k8i_A 89 ELQVGMRFLAETDQG--P-VPVEITAVEDDHVVVDG 121 (171)
T ss_dssp CCCTTCEEEEEETTE--E-EEEEEEEECSSEEEEES
T ss_pred CccCCcEEEEECCCC--c-EEEEEEEEcCCEEEEeC
Confidence 578999999988765 3 69999999999887754
No 56
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=80.83 E-value=5.1 Score=33.62 Aligned_cols=52 Identities=15% Similarity=0.372 Sum_probs=43.0
Q ss_pred CcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEEcccCCCCCCCeeeeCCCCCeecc
Q psy6234 7 NISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRYEGFGEDSSKDFWVNLCSSMVHPV 75 (260)
Q Consensus 7 ~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPv 75 (260)
.+++||.+.+.-. ...|-|+|+++=+..+.++|++ +...=|+.-.|++|.|+
T Consensus 158 ~~~~GQ~i~~E~~-------------g~w~~~~V~~vD~SLv~v~f~~----dkr~EWIYRGS~Rl~pl 209 (213)
T 3dlm_A 158 LLKSGQLIKTEWE-------------GTWWKSRVEEVDGSLVRILFLD----DKRCEWIYRGSTRLEPM 209 (213)
T ss_dssp CCCTTCEEEEEET-------------TEEEEEEEEEEETTEEEEEETT----TTEEEEEETTCTTBCC-
T ss_pred EcCCCCEEEEEec-------------CcEEEEEEEEEcceeEEEEEcC----CCeeEEEEcCCccchhc
Confidence 4678999998532 4588999999999999999976 24568999999999986
No 57
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=80.35 E-value=4.2 Score=30.60 Aligned_cols=49 Identities=10% Similarity=0.129 Sum_probs=36.9
Q ss_pred cCCCCCCcEEEEecCC--CCCceEEEEEEeEeC---------CeEEEEEec--CCCCEEEEc
Q psy6234 125 KSRFRVDMNLEVVDKK--RISQVKVATIEKIVG---------KRLQVHYYD--DDDGFCCHQ 173 (260)
Q Consensus 125 ~~~F~vGmkLEavD~~--~~~~i~vAtV~~v~g---------~rl~v~~~~--~~~~~w~~~ 173 (260)
...|.+|.+|=+.... ....++-|.|++|.. ..|+|||.| ...|-|+..
T Consensus 17 ~~~F~~GEkVLc~hgd~~k~~~lYeAKIl~v~~~~~~~g~~~~~Y~VHY~GWn~~wDEWV~e 78 (110)
T 3m9p_A 17 KFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWNRSWDRWAAE 78 (110)
T ss_dssp -CCSCTTCEEEEECSCTTSCCCEEEEEEEEEEEEECTTCCEEEEEEEEETTSCGGGCEEEEG
T ss_pred CCcccCCCEEEEEcCCCCCCCCceeeEEEEEEeccCcccccceEEEEEECCCCcchhhccCH
Confidence 4579999999887542 235799999998862 258999999 567889864
No 58
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=79.87 E-value=6.9 Score=26.63 Aligned_cols=46 Identities=13% Similarity=0.011 Sum_probs=35.5
Q ss_pred cCCCCCCcEEEEecCCCCCceEEEEEEeEeC--CeEEEEEecCCCCEEEEc
Q psy6234 125 KSRFRVDMNLEVVDKKRISQVKVATIEKIVG--KRLQVHYYDDDDGFCCHQ 173 (260)
Q Consensus 125 ~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g--~rl~v~~~~~~~~~w~~~ 173 (260)
...|++|.-+=|.- .-++..+|||++|.. +..+|+|.|. ..||...
T Consensus 11 ~~~f~vGddVLA~w--tDGl~Y~gtI~~V~~~~gtC~V~F~D~-s~~w~~~ 58 (66)
T 2eqj_A 11 ACKFEEGQDVLARW--SDGLFYLGTIKKINILKQSCFIIFEDS-SKSWVLW 58 (66)
T ss_dssp CCCSCTTCEEEEEC--TTSCEEEEEEEEEETTTTEEEEEETTT-EEEEEET
T ss_pred cccccCCCEEEEEE--ccCcEEEeEEEEEccCCcEEEEEEccC-CEEEEEe
Confidence 45799999887776 458999999999995 5788888763 2466653
No 59
>2lrq_A Protein MRG15, NUA4 complex subunit EAF3 homolog; epigenetics, LID complex, transcription; NMR {Drosophila melanogaster}
Probab=80.36 E-value=0.39 Score=34.60 Aligned_cols=47 Identities=19% Similarity=0.242 Sum_probs=35.8
Q ss_pred cCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEe----CCEEEEEEcccCCCCCCCeeeeC
Q psy6234 6 ENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIA----GYKALLRYEGFGEDSSKDFWVNL 67 (260)
Q Consensus 6 ~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~----G~rl~lr~~G~~~d~~~dfW~~~ 67 (260)
..|++|.++.+... ....-|+|+++- +....+||.||. .+.|=|+..
T Consensus 11 ~~~~~Gekv~~~~~-------------~~~y~AkIl~i~~~~~~~~YyVHY~GwN--kR~DEWV~~ 61 (85)
T 2lrq_A 11 TLFVDGERVLCFHG-------------PLIYEAKVLKTKPDATPVEYYIHYAGWS--KNWDEWVPE 61 (85)
Confidence 35888999988742 235789999886 356889999996 578999874
No 60
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=78.26 E-value=5 Score=28.12 Aligned_cols=45 Identities=18% Similarity=0.298 Sum_probs=35.2
Q ss_pred CcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEe--CCEEEEEEcccCCCCCCCeeeeCC
Q psy6234 7 NISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIA--GYKALLRYEGFGEDSSKDFWVNLC 68 (260)
Q Consensus 7 ~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~--G~rl~lr~~G~~~d~~~dfW~~~~ 68 (260)
.|++|.-|-+...| ..|..+||++|- +.+-+++|+. ...||+...
T Consensus 26 ~f~eGeDVLarwsD------------GlfYLGTI~kV~~~~e~ClV~F~D-----~S~~W~~~k 72 (79)
T 2m0o_A 26 RLWEGQDVLARWTD------------GLLYLGTIKKVDSAREVCLVQFED-----DSQFLVLWK 72 (79)
T ss_dssp CCCTTCEEEBCCTT------------SCCCEEEEEEEETTTTEEEEEETT-----SCEEEEETT
T ss_pred eeccCCEEEEEecC------------CCEEeEEEEEeccCCCEEEEEEcC-----CCeEEEEee
Confidence 57888888776544 468999999887 8899999964 357999764
No 61
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=76.74 E-value=6.8 Score=26.28 Aligned_cols=46 Identities=17% Similarity=0.432 Sum_probs=36.6
Q ss_pred cCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEe--CCEEEEEEcccCCCCCCCeeeeCC
Q psy6234 6 ENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIA--GYKALLRYEGFGEDSSKDFWVNLC 68 (260)
Q Consensus 6 ~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~--G~rl~lr~~G~~~d~~~dfW~~~~ 68 (260)
..|++|.-+-+.-.| ..|..++|.+|- +.+-+++|.. ...||....
T Consensus 6 ~~f~eGqdVLarWsD------------GlfYlgtV~kV~~~~~~ClV~FeD-----~s~~wv~~k 53 (63)
T 2e5q_A 6 SGLTEGQYVLCRWTD------------GLYYLGKIKRVSSSKQSCLVTFED-----NSKYWVLWK 53 (63)
T ss_dssp CCCCTTCEEEEECTT------------SCEEEEEECCCCSTTSEEEEEETT-----SCEEEEEGG
T ss_pred cceecCCEEEEEecC------------CCEEEEEEEEEecCCCEEEEEEcc-----CceeEEEee
Confidence 578999999888664 459999999998 7788999954 357998653
No 62
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=76.31 E-value=7.1 Score=29.34 Aligned_cols=51 Identities=20% Similarity=0.315 Sum_probs=37.1
Q ss_pred cCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeC---------CEEEEEEcccCCCCCCCeeee
Q psy6234 6 ENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAG---------YKALLRYEGFGEDSSKDFWVN 66 (260)
Q Consensus 6 ~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G---------~rl~lr~~G~~~d~~~dfW~~ 66 (260)
..|++|.+|-+...+. | ....+.-|.|+++.. ...+|||.||. .+.|=|+.
T Consensus 18 ~~F~~GEkVLc~hgd~---~-----k~~~lYeAKIl~v~~~~~~~g~~~~~Y~VHY~GWn--~~wDEWV~ 77 (110)
T 3m9p_A 18 FKFHSGEKVLCFEPDP---T-----KARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWN--RSWDRWAA 77 (110)
T ss_dssp CCSCTTCEEEEECSCT---T-----SCCCEEEEEEEEEEEEECTTCCEEEEEEEEETTSC--GGGCEEEE
T ss_pred CcccCCCEEEEEcCCC---C-----CCCCceeeEEEEEEeccCcccccceEEEEEECCCC--cchhhccC
Confidence 4689999999874321 1 113578899999862 36889999996 47889985
No 63
>2jz2_A SSL0352 protein; SH3-like, synechocystis SP. PCC 6803, targe PSI, protein structure initiative, northeast structural GEN consortium, NESG; NMR {Synechocystis SP} PDB: 3c4s_A
Probab=75.14 E-value=14 Score=24.93 Aligned_cols=46 Identities=4% Similarity=-0.030 Sum_probs=39.8
Q ss_pred CCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEEEecCCCCEEEEc
Q psy6234 128 FRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVHYYDDDDGFCCHQ 173 (260)
Q Consensus 128 F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~~~~~~~~~w~~~ 173 (260)
+-+||-+-+.|+.++.--.-..|.+|.+++.-|.|.|..-|-.+-.
T Consensus 2 ilPG~~V~V~np~~~Yy~y~G~VQRvsdgkaaVLFEGGnWDKLVTf 47 (66)
T 2jz2_A 2 IFPGATVRVTNVDDTYYRFEGLVQRVSDGKAAVLFENGNWDKLVTF 47 (66)
T ss_dssp CCTTCEEEECCTTSTTBTCEEEEEEEETTEEEEEEESSSCEEEEEE
T ss_pred ccCCCEEEEeCCCCcccceeEEEEEecCCcEEEEecCCCceeEEEE
Confidence 4689999999999999999999999999999999999665554443
No 64
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=70.21 E-value=13 Score=26.61 Aligned_cols=40 Identities=18% Similarity=0.097 Sum_probs=32.2
Q ss_pred ccCCCCCCcEEEEecCCCCCceEEEEEEeEeC--CeEEEEEec
Q psy6234 124 VKSRFRVDMNLEVVDKKRISQVKVATIEKIVG--KRLQVHYYD 164 (260)
Q Consensus 124 ~~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g--~rl~v~~~~ 164 (260)
+.+.+++|+.+-|.=..+ ...+.|+|.++.+ +.+.|.|.|
T Consensus 7 ~~~~~kvGd~C~A~ys~D-g~wYrA~I~~i~~~~~~~~V~fiD 48 (88)
T 1g5v_A 7 SLQQWKVGDKCSAIWSED-GCIYPATIASIDFKRETCVVVYTG 48 (88)
T ss_dssp --CCCCSSCEEEEECTTT-CCEEEEEEEEEETTTTEEEEEETT
T ss_pred ccCCCCCCCEEEEEECCC-CCEEEEEEEEecCCCCEEEEEEec
Confidence 345799999999986433 6799999999996 789999987
No 65
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=69.41 E-value=19 Score=23.84 Aligned_cols=40 Identities=18% Similarity=0.126 Sum_probs=32.6
Q ss_pred ccCCCCCCcEEEEecCCCCCceEEEEEEeEeC--CeEEEEEec
Q psy6234 124 VKSRFRVDMNLEVVDKKRISQVKVATIEKIVG--KRLQVHYYD 164 (260)
Q Consensus 124 ~~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g--~rl~v~~~~ 164 (260)
....+++|+..-|.=..+ ....-|+|.++.+ +.+.|.|.+
T Consensus 5 ~~~~~~vGd~c~A~~s~D-g~wYrA~I~~v~~~~~~~~V~fvd 46 (64)
T 4a4f_A 5 PTHSWKVGDKCMAVWSED-GQCYEAEIEEIDEENGTAAITFAG 46 (64)
T ss_dssp CSSCCCTTCEEEEECTTT-SSEEEEEEEEEETTTTEEEEEETT
T ss_pred cCCCCCCCCEEEEEECCC-CCEEEEEEEEEcCCCCEEEEEEEe
Confidence 346789999999886433 5799999999996 589999977
No 66
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=69.02 E-value=17 Score=23.59 Aligned_cols=38 Identities=18% Similarity=0.129 Sum_probs=31.1
Q ss_pred CCCCCCcEEEEecCCCCCceEEEEEEeEeC--CeEEEEEec
Q psy6234 126 SRFRVDMNLEVVDKKRISQVKVATIEKIVG--KRLQVHYYD 164 (260)
Q Consensus 126 ~~F~vGmkLEavD~~~~~~i~vAtV~~v~g--~rl~v~~~~ 164 (260)
+.|++|+..-|.=..+ ...+-|+|+++.+ +.+.|.|.|
T Consensus 2 ~~~~~G~~c~A~~s~D-g~wYrA~I~~i~~~~~~~~V~f~D 41 (59)
T 1mhn_A 2 QQWKVGDKCSAIWSED-GCIYPATIASIDFKRETCVVVYTG 41 (59)
T ss_dssp CCCCTTCEEEEECTTT-SCEEEEEEEEEETTTTEEEEEETT
T ss_pred CcCCcCCEEEEEECCC-CCEEEEEEEEEcCCCCEEEEEEEc
Confidence 4689999988885433 5789999999985 789999977
No 67
>2k3y_A Chromatin modification-related protein EAF3; dimethylated histone H3K36, EAF3-H3K36ME2 fusion, chromo barrel domain, histone deacetylase; HET: M2L; NMR {Saccharomyces cerevisiae}
Probab=67.63 E-value=10 Score=29.55 Aligned_cols=27 Identities=19% Similarity=0.128 Sum_probs=22.2
Q ss_pred cCCCCCCcEEEEecCCCCCceEEEEEEeEe
Q psy6234 125 KSRFRVDMNLEVVDKKRISQVKVATIEKIV 154 (260)
Q Consensus 125 ~~~F~vGmkLEavD~~~~~~i~vAtV~~v~ 154 (260)
+..|.+|.++=+.. . .+++-|.|+++.
T Consensus 7 ~~~f~~gekvl~~h--g-~llYeAKVl~v~ 33 (136)
T 2k3y_A 7 EQEFALGGRVLAFH--G-PLMYEAKILKIW 33 (136)
T ss_dssp GGSCCTTSEEEEEC--S-SCEEEEEEEEEE
T ss_pred ccccCCCCEEEEEE--C-CeeEEEEEEEEE
Confidence 35799999999988 2 459999999877
No 68
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.72 E-value=27 Score=23.70 Aligned_cols=52 Identities=17% Similarity=0.307 Sum_probs=39.4
Q ss_pred cCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEe--CCEEEEEEcccCCCCCCCeeeeCCCCCeeccc
Q psy6234 6 ENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIA--GYKALLRYEGFGEDSSKDFWVNLCSSMVHPVG 76 (260)
Q Consensus 6 ~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~--G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvG 76 (260)
..|++|.-|-+.-.| ..|..+||.+|- ..+-+++|.. ...||.... +|++.+
T Consensus 8 ~~f~eGqdVLarWsD------------GlfYlGtV~kV~~~~~~ClV~FeD-----~s~~wv~~k--di~~~~ 61 (68)
T 2e5p_A 8 PRLWEGQDVLARWTD------------GLLYLGTIKKVDSAREVCLVQFED-----DSQFLVLWK--DISPAA 61 (68)
T ss_dssp CCCCTTCEEEEECTT------------SSEEEEEEEEEETTTTEEEEEETT-----TEEEEEETT--TEECCC
T ss_pred cccccCCEEEEEecC------------CcEEEeEEEEEecCCcEEEEEEcc-----CCeeeeeee--cccccc
Confidence 568999999887654 469999999998 6789999954 347998764 445444
No 69
>2k3y_A Chromatin modification-related protein EAF3; dimethylated histone H3K36, EAF3-H3K36ME2 fusion, chromo barrel domain, histone deacetylase; HET: M2L; NMR {Saccharomyces cerevisiae}
Probab=64.83 E-value=17 Score=28.23 Aligned_cols=31 Identities=19% Similarity=0.202 Sum_probs=23.4
Q ss_pred CCccccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEe
Q psy6234 1 MSDCWENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIA 44 (260)
Q Consensus 1 ~~~~~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~ 44 (260)
|.++=..|++|.++-+..- ..++-|.|+++-
T Consensus 3 ~~~~~~~f~~gekvl~~hg-------------~llYeAKVl~v~ 33 (136)
T 2k3y_A 3 MVDLEQEFALGGRVLAFHG-------------PLMYEAKILKIW 33 (136)
T ss_dssp CCGGGGSCCTTSEEEEECS-------------SCEEEEEEEEEE
T ss_pred ccccccccCCCCEEEEEEC-------------CeeEEEEEEEEE
Confidence 4455567999999998742 248999999876
No 70
>1qp2_A Protein (PSAE protein); mainly beta, roll, pleckstrin topology, SH3-like, electron T; NMR {Nostoc SP} SCOP: b.34.4.2 PDB: 1qp3_A
Probab=60.31 E-value=6.6 Score=26.96 Aligned_cols=35 Identities=26% Similarity=0.609 Sum_probs=24.7
Q ss_pred cccccEEEEEeCCCCCCCCCCCCCCCcEE---EEEEEEEeCCE----EEEEEccc
Q psy6234 8 ISVGMKVEVENTDTDTPSGNHDNYPDSFW---VASVTQIAGYK----ALLRYEGF 55 (260)
Q Consensus 8 ~~~GmklEv~~~~~~~~~~~~~~~p~~~w---vA~V~~~~G~r----l~lr~~G~ 55 (260)
++.|+++-+..+ .+|| +.+|..+-.+. +.+||++.
T Consensus 2 i~rGs~VrIlr~-------------eSywy~~vG~V~~Vd~~~~~ypV~VrFekv 43 (70)
T 1qp2_A 2 VQRGSKVRILRP-------------ESYWFQDVGTVASVDQSGIKYPVIVRFEKV 43 (70)
T ss_dssp CCTTCEEEECCT-------------TSTTTTCEEEEEEECCSSCSCSEEEECSSC
T ss_pred cCCCCEEEEcCc-------------cceeecceeEEEEEeCCCcEeeEEEEeccc
Confidence 688999998744 4566 55666665333 99999984
No 71
>2ldm_A Uncharacterized protein; PHF20, tudor domain, epigenetics, methylated P53, transcript factor, transcription-protein binding complex; HET: M2L; NMR {Homo sapiens}
Probab=61.35 E-value=2.3 Score=30.27 Aligned_cols=37 Identities=19% Similarity=0.267 Sum_probs=30.2
Q ss_pred CCCCCCcEEEEecCCCCCceEEEEEEeEeC-CeEEEEEec
Q psy6234 126 SRFRVDMNLEVVDKKRISQVKVATIEKIVG-KRLQVHYYD 164 (260)
Q Consensus 126 ~~F~vGmkLEavD~~~~~~i~vAtV~~v~g-~rl~v~~~~ 164 (260)
..|++|.++-|.=. -...++|+|+++.+ +.+.|.|++
T Consensus 5 ~~~kvGd~clAkws--Dg~wY~A~I~~v~~~~~y~V~F~D 42 (81)
T 2ldm_A 5 SEFQINEQVLASWS--DSRFYPAKVTAVNKDGTYTVKFYD 42 (81)
Confidence 46999999999644 56899999999976 468888876
No 72
>3e9g_A Chromatin modification-related protein EAF3; chromatin remodeling, chromo domain, transcription factor, transcription regulation; 2.50A {Saccharomyces cerevisiae} PDB: 2k3x_A 3e9f_A*
Probab=55.61 E-value=37 Score=26.14 Aligned_cols=31 Identities=16% Similarity=0.166 Sum_probs=19.9
Q ss_pred CCccccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEe
Q psy6234 1 MSDCWENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIA 44 (260)
Q Consensus 1 ~~~~~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~ 44 (260)
|.+.-..|++|-++-+... ..+.-|.|+++-
T Consensus 1 ~~~~~p~f~~gE~VlcfHg-------------~~~YeAKIl~i~ 31 (130)
T 3e9g_A 1 MVDLEQEFALGGRCLAFHG-------------PLMYEAKILKIW 31 (130)
T ss_dssp ------CCCTTCEEEEEET-------------TEEEEEEEEEEE
T ss_pred CCCccccccCCCEEEEEeC-------------CcceeeEEEEee
Confidence 5556678999999998853 237889999884
No 73
>3e9g_A Chromatin modification-related protein EAF3; chromatin remodeling, chromo domain, transcription factor, transcription regulation; 2.50A {Saccharomyces cerevisiae} PDB: 2k3x_A 3e9f_A*
Probab=55.34 E-value=27 Score=26.88 Aligned_cols=26 Identities=19% Similarity=0.061 Sum_probs=20.9
Q ss_pred CCCCCCcEEEEecCCCCCceEEEEEEeEe
Q psy6234 126 SRFRVDMNLEVVDKKRISQVKVATIEKIV 154 (260)
Q Consensus 126 ~~F~vGmkLEavD~~~~~~i~vAtV~~v~ 154 (260)
..|++|-++-+.+-- +++-|.|++|.
T Consensus 6 p~f~~gE~VlcfHg~---~~YeAKIl~i~ 31 (130)
T 3e9g_A 6 QEFALGGRCLAFHGP---LMYEAKILKIW 31 (130)
T ss_dssp -CCCTTCEEEEEETT---EEEEEEEEEEE
T ss_pred ccccCCCEEEEEeCC---cceeeEEEEee
Confidence 479999999998873 48999999884
No 74
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=54.28 E-value=48 Score=22.45 Aligned_cols=45 Identities=20% Similarity=0.356 Sum_probs=35.4
Q ss_pred CcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeC--CEEEEEEcccCCCCCCCeeeeCC
Q psy6234 7 NISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAG--YKALLRYEGFGEDSSKDFWVNLC 68 (260)
Q Consensus 7 ~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G--~rl~lr~~G~~~d~~~dfW~~~~ 68 (260)
.|++|.-+-+.-.| ..+..|+|++|-. +.-+++|.. ...||..-.
T Consensus 13 ~f~vGddVLA~wtD------------Gl~Y~gtI~~V~~~~gtC~V~F~D-----~s~~w~~~k 59 (66)
T 2eqj_A 13 KFEEGQDVLARWSD------------GLFYLGTIKKINILKQSCFIIFED-----SSKSWVLWK 59 (66)
T ss_dssp CSCTTCEEEEECTT------------SCEEEEEEEEEETTTTEEEEEETT-----TEEEEEETT
T ss_pred cccCCCEEEEEEcc------------CcEEEeEEEEEccCCcEEEEEEcc-----CCEEEEEee
Confidence 58999999888654 4599999999994 789999954 346997653
No 75
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=54.15 E-value=30 Score=23.85 Aligned_cols=38 Identities=16% Similarity=0.134 Sum_probs=31.0
Q ss_pred cCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeC-CEEEEEEccc
Q psy6234 6 ENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAG-YKALLRYEGF 55 (260)
Q Consensus 6 ~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G-~rl~lr~~G~ 55 (260)
..+++|.++.+.=.| ..+.-|+|.++.+ +...+.|+++
T Consensus 8 ~~~kvGd~clA~wsD------------g~~Y~A~I~~v~~~~~~~V~f~Dy 46 (74)
T 2equ_A 8 FDFKAGEEVLARWTD------------CRYYPAKIEAINKEGTFTVQFYDG 46 (74)
T ss_dssp CCCCTTCEEEEECSS------------SSEEEEEEEEESTTSSEEEEETTS
T ss_pred CCCCCCCEEEEECCC------------CCEEEEEEEEECCCCEEEEEEecC
Confidence 368999999998432 3589999999986 6789999876
No 76
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=51.24 E-value=37 Score=21.41 Aligned_cols=37 Identities=11% Similarity=0.082 Sum_probs=28.2
Q ss_pred CCCCCcEEEEecCCCCCceEEEEEEeEeC--CeEEEEEec
Q psy6234 127 RFRVDMNLEVVDKKRISQVKVATIEKIVG--KRLQVHYYD 164 (260)
Q Consensus 127 ~F~vGmkLEavD~~~~~~i~vAtV~~v~g--~rl~v~~~~ 164 (260)
.|++|+..-|.=..+ ....-|+|.++.+ +.+.|.|.|
T Consensus 1 ~wk~G~~c~A~~s~D-g~wYrA~I~~i~~~~~~~~V~fvD 39 (54)
T 3s6w_A 1 MWKPGDECFALYWED-NKFYRAEVEALHSSGMTAVVKFID 39 (54)
T ss_dssp CCCTTCEEEEEETTT-TEEEEEEEEEC--CCSEEEEEETT
T ss_pred CCCCCCEEEEEECCC-CCEEEEEEEEEeCCCCEEEEEEEc
Confidence 378999998886433 4689999999974 578999977
No 77
>2bud_A Males-absent on the first protein; transferase, MOF, HAT, acetyl-transfer, dosage compensation complex, DCC, royal family; NMR {Drosophila melanogaster} SCOP: b.34.13.3
Probab=48.75 E-value=73 Score=22.96 Aligned_cols=35 Identities=20% Similarity=0.242 Sum_probs=27.6
Q ss_pred CcEEEEEEEEEe-------CCEEEEEEcccCCCCCCCeeeeCCC
Q psy6234 33 DSFWVASVTQIA-------GYKALLRYEGFGEDSSKDFWVNLCS 69 (260)
Q Consensus 33 ~~~wvA~V~~~~-------G~rl~lr~~G~~~d~~~dfW~~~~s 69 (260)
..+.-|+|+++- +....+||.|+. ...|=|+..+.
T Consensus 28 g~~yeAeIl~ir~~~~~~~~~~YYVHY~g~N--kRlDEWV~~~R 69 (92)
T 2bud_A 28 GTVHRGQVLQSRTTENAAAPDEYYVHYVGLN--RRLDGWVGRHR 69 (92)
T ss_dssp SCEEEEEEEEEECTTTCSSCCEEEEECSSSC--TTTCEEEETTT
T ss_pred CCEEEEEEEEEeeccCCCCCcEEEEEeCCcc--cccccccCHHH
Confidence 357889999976 246889999995 57899997754
No 78
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=48.13 E-value=29 Score=27.30 Aligned_cols=35 Identities=11% Similarity=0.155 Sum_probs=28.7
Q ss_pred CCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEEEe
Q psy6234 127 RFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVHYY 163 (260)
Q Consensus 127 ~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~~~ 163 (260)
..++||.+++.++. ....+++|++|.+.++.|-|.
T Consensus 84 ~~~~G~~~~~~~~~--G~~~~~~V~~v~~~~v~vD~N 118 (158)
T 3cgm_A 84 EVVPGAQFYAQDME--GNPMPLTVVAVEGEEVTVDFN 118 (158)
T ss_dssp CCCTTCEEEEEETT--TEEEEEEEEEEETTEEEEECS
T ss_pred CCccCCEEEEECCC--CCEEEEEEEEECCCEEEEeCC
Confidence 57899999998766 366789999999998887553
No 79
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, nucleus, transcription, transcription regulation, chromosomal protein, DNA-binding; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=47.85 E-value=34 Score=27.80 Aligned_cols=39 Identities=13% Similarity=0.059 Sum_probs=33.5
Q ss_pred CCCCCCcEEEEecCCCCCceEEEEEEeEeC---CeEEEEEecC
Q psy6234 126 SRFRVDMNLEVVDKKRISQVKVATIEKIVG---KRLQVHYYDD 165 (260)
Q Consensus 126 ~~F~vGmkLEavD~~~~~~i~vAtV~~v~g---~rl~v~~~~~ 165 (260)
..|..|.++=|+=|. ..+++.|+|...-. +.++|.|+|+
T Consensus 115 ~~f~~G~~VLAlYP~-TT~FY~A~V~~~p~~~~~~y~L~FEdd 156 (180)
T 3mea_A 115 ALFQKEQLVLALYPQ-TTCFYRALIHAPPQRPQDDYSVLFEDT 156 (180)
T ss_dssp GSCCTTCEEEEECTT-SSEEEEEEEEECCSSTTCCEEEEEBCT
T ss_pred ccCCCCCEEEEeCCC-CceeeEEEEecCCCCCCCcEEEEEcCC
Confidence 459999999999988 68899999998754 5799999984
No 80
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=45.49 E-value=40 Score=26.19 Aligned_cols=35 Identities=17% Similarity=0.195 Sum_probs=28.8
Q ss_pred CCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEEEe
Q psy6234 127 RFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVHYY 163 (260)
Q Consensus 127 ~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~~~ 163 (260)
..++||.+++.++.- ...+++|++|.++++.|-|.
T Consensus 93 ~~~~G~~~~~~~~~G--~~~~~~V~~v~~~~v~vD~N 127 (151)
T 2kr7_A 93 ELEKGMSVFGQTEDN--QTIQAIIKDFSATHVMVDYN 127 (151)
T ss_dssp CCCTTCEEEEEETTT--EEEEEEEEEECSSEEEEEEC
T ss_pred CCccCCEEEEECCCC--CEEEEEEEEECCCEEEEECC
Confidence 578999999988764 56789999999999887653
No 81
>2jz2_A SSL0352 protein; SH3-like, synechocystis SP. PCC 6803, targe PSI, protein structure initiative, northeast structural GEN consortium, NESG; NMR {Synechocystis SP} PDB: 3c4s_A
Probab=45.19 E-value=39 Score=22.68 Aligned_cols=38 Identities=26% Similarity=0.209 Sum_probs=31.7
Q ss_pred cccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEEccc
Q psy6234 8 ISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRYEGF 55 (260)
Q Consensus 8 ~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~~G~ 55 (260)
|-+||.+-|.|++ ++.--.-..|-.+.++++-+-|+|-
T Consensus 2 ilPG~~V~V~np~----------~~Yy~y~G~VQRvsdgkaaVLFEGG 39 (66)
T 2jz2_A 2 IFPGATVRVTNVD----------DTYYRFEGLVQRVSDGKAAVLFENG 39 (66)
T ss_dssp CCTTCEEEECCTT----------STTBTCEEEEEEEETTEEEEEEESS
T ss_pred ccCCCEEEEeCCC----------CcccceeEEEEEecCCcEEEEecCC
Confidence 5689999998873 5566677888999999999999994
No 82
>1g5v_A SurviVal motor neuron protein 1; mRNA processing, translation; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=45.10 E-value=67 Score=22.78 Aligned_cols=41 Identities=22% Similarity=0.408 Sum_probs=32.6
Q ss_pred cCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeC--CEEEEEEcccCC
Q psy6234 6 ENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAG--YKALLRYEGFGE 57 (260)
Q Consensus 6 ~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G--~rl~lr~~G~~~ 57 (260)
..+++|+.+-+.-.. | ..+.-|+|..+.+ +.+.+.|.+|+.
T Consensus 9 ~~~kvGd~C~A~ys~-D----------g~wYrA~I~~i~~~~~~~~V~fiDYGN 51 (88)
T 1g5v_A 9 QQWKVGDKCSAIWSE-D----------GCIYPATIASIDFKRETCVVVYTGYGN 51 (88)
T ss_dssp CCCCSSCEEEEECTT-T----------CCEEEEEEEEEETTTTEEEEEETTTCC
T ss_pred CCCCCCCEEEEEECC-C----------CCEEEEEEEEecCCCCEEEEEEecCCC
Confidence 467899999987421 1 3588999999985 899999999973
No 83
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=40.87 E-value=19 Score=28.03 Aligned_cols=30 Identities=13% Similarity=0.155 Sum_probs=25.2
Q ss_pred CCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEEEe
Q psy6234 127 RFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVHYY 163 (260)
Q Consensus 127 ~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~~~ 163 (260)
..++||.+++.+ .+++|++|.++++.|-|.
T Consensus 103 ~~~~G~~~~~~~-------~~~~V~~v~~~~v~vD~N 132 (151)
T 1ix5_A 103 EPEEGMVILAEG-------IPATITEVTDNEVTLDFN 132 (151)
T ss_dssp CCCTTEEEESSS-------CEEEEEEEETTEEEEECC
T ss_pred cccccCEEEECC-------eEEEEEEEcCCEEEEeCC
Confidence 478999999766 689999999999888664
No 84
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=40.25 E-value=72 Score=20.44 Aligned_cols=40 Identities=20% Similarity=0.348 Sum_probs=31.4
Q ss_pred cCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeC--CEEEEEEcccC
Q psy6234 6 ENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAG--YKALLRYEGFG 56 (260)
Q Consensus 6 ~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G--~rl~lr~~G~~ 56 (260)
..+++|...-+.-.. + ..+.-|+|.++.+ +...++|.+|+
T Consensus 2 ~~~~~G~~c~A~~s~----------D-g~wYrA~I~~i~~~~~~~~V~f~DYG 43 (59)
T 1mhn_A 2 QQWKVGDKCSAIWSE----------D-GCIYPATIASIDFKRETCVVVYTGYG 43 (59)
T ss_dssp CCCCTTCEEEEECTT----------T-SCEEEEEEEEEETTTTEEEEEETTTT
T ss_pred CcCCcCCEEEEEECC----------C-CCEEEEEEEEEcCCCCEEEEEEEcCC
Confidence 357899999887321 1 3588899999984 89999999987
No 85
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=39.29 E-value=85 Score=22.25 Aligned_cols=37 Identities=16% Similarity=0.191 Sum_probs=29.4
Q ss_pred cCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeC-CEEEEEEcc
Q psy6234 6 ENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAG-YKALLRYEG 54 (260)
Q Consensus 6 ~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G-~rl~lr~~G 54 (260)
-.|++|.++.+.=.| ..|..|+|..+.| +...+.|++
T Consensus 20 ~~f~vGd~VlArW~D------------~~yYPAkI~sV~~~~~YtV~F~D 57 (85)
T 3qii_A 20 SEFQINEQVLACWSD------------CRFYPAKVTAVNKDGTYTVKFYD 57 (85)
T ss_dssp -CCCTTCEEEEECTT------------SCEEEEEEEEECTTSEEEEEETT
T ss_pred cccccCCEEEEEeCC------------CCEeeEEEEEECCCCeEEEEEeC
Confidence 468999999997532 4599999999998 567888875
No 86
>2bud_A Males-absent on the first protein; transferase, MOF, HAT, acetyl-transfer, dosage compensation complex, DCC, royal family; NMR {Drosophila melanogaster} SCOP: b.34.13.3
Probab=36.16 E-value=69 Score=23.07 Aligned_cols=43 Identities=12% Similarity=-0.001 Sum_probs=30.3
Q ss_pred CcEEEEecCCCCCceEEEEEEeEeC-------CeEEEEEec--CCCCEEEEcCC
Q psy6234 131 DMNLEVVDKKRISQVKVATIEKIVG-------KRLQVHYYD--DDDGFCCHQDS 175 (260)
Q Consensus 131 GmkLEavD~~~~~~i~vAtV~~v~g-------~rl~v~~~~--~~~~~w~~~~S 175 (260)
|-++=+... -..++.|.|.++-- ..|.|||.| ...|-|+..+.
T Consensus 18 ~e~vlc~~~--dg~~yeAeIl~ir~~~~~~~~~~YYVHY~g~NkRlDEWV~~~R 69 (92)
T 2bud_A 18 DKIYFIRRE--DGTVHRGQVLQSRTTENAAAPDEYYVHYVGLNRRLDGWVGRHR 69 (92)
T ss_dssp TSCEEEECT--TSCEEEEEEEEEECTTTCSSCCEEEEECSSSCTTTCEEEETTT
T ss_pred CCEEEEEeC--CCCEEEEEEEEEeeccCCCCCcEEEEEeCCcccccccccCHHH
Confidence 334444442 35788999998762 268999999 56799998765
No 87
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=35.24 E-value=1e+02 Score=20.77 Aligned_cols=37 Identities=16% Similarity=0.191 Sum_probs=29.7
Q ss_pred cCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeC-CEEEEEEcc
Q psy6234 6 ENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAG-YKALLRYEG 54 (260)
Q Consensus 6 ~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G-~rl~lr~~G 54 (260)
..|++|.++.+.=.| ..|..|+|..+.| +...+.|++
T Consensus 5 ~~~~vGd~vmArW~D------------~~yYpA~I~si~~~~~Y~V~F~d 42 (67)
T 3p8d_A 5 SEFQINEQVLACWSD------------CRFYPAKVTAVNKDGTYTVKFYD 42 (67)
T ss_dssp CCCCTTCEEEEECTT------------SCEEEEEEEEECTTSEEEEEETT
T ss_pred cccccCCEEEEEcCC------------CCEeeEEEEEECCCCeEEEEEeC
Confidence 368999999998532 4599999999998 467788876
No 88
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=34.62 E-value=1.1e+02 Score=20.89 Aligned_cols=39 Identities=10% Similarity=0.057 Sum_probs=31.2
Q ss_pred cCCCCCCcEEEEecCCCCCceEEEEEEeEeC--CeEEEEEec
Q psy6234 125 KSRFRVDMNLEVVDKKRISQVKVATIEKIVG--KRLQVHYYD 164 (260)
Q Consensus 125 ~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g--~rl~v~~~~ 164 (260)
...+++|+.+-|.=..+ ...+-|+|+++.+ +.+.|.|.|
T Consensus 7 ~~~~~~G~~c~A~~s~D-g~wYRA~I~~i~~~~~~~~V~fiD 47 (78)
T 2d9t_A 7 GKVWKPGDECFALYWED-NKFYRAEVEALHSSGMTAVVKFTD 47 (78)
T ss_dssp CCCCCTTCEEEEECTTT-CCEEEEEEEEECSSSSEEEEEETT
T ss_pred ccCCCcCCEEEEEECCC-CCEEEEEEEEEeCCCCEEEEEEEc
Confidence 35689999988875433 5789999999986 689999977
No 89
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=32.62 E-value=79 Score=25.15 Aligned_cols=34 Identities=15% Similarity=0.196 Sum_probs=26.3
Q ss_pred CcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEE
Q psy6234 7 NISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRY 52 (260)
Q Consensus 7 ~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~ 52 (260)
.+++||.+++.+.+ ...-.++|+++-+.++.|=|
T Consensus 112 ~~~~G~~~~~~~~~------------G~~~~~~V~~v~~~~V~vD~ 145 (169)
T 4dt4_A 112 EPEIGAIMLFTAMD------------GSEMPGVIREINGDSITVDF 145 (169)
T ss_dssp CCCTTCEEEEECTT------------SCEEEEEEEEEETTEEEEEC
T ss_pred CCCCCcEEEEECCC------------CCEEEEEEEEEcCCEEEEeC
Confidence 47899999998642 23568899999999887744
No 90
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=30.54 E-value=45 Score=26.20 Aligned_cols=28 Identities=14% Similarity=0.148 Sum_probs=22.5
Q ss_pred CCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEEE
Q psy6234 128 FRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVHY 162 (260)
Q Consensus 128 F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~~ 162 (260)
.++||.+++-.+ .++|++|.++++.|-|
T Consensus 103 ~~~G~~~~~~~~-------~~~V~~v~~~~V~vD~ 130 (157)
T 3pr9_A 103 PIKGLTITIDGI-------PGKIVSINSGRVLVDF 130 (157)
T ss_dssp CCTTCEEEETTE-------EEEEEEEETTEEEEEC
T ss_pred cCCCcEEEecCC-------CeEEEEEcCCEEEEEC
Confidence 578999998432 5899999999888755
No 91
>2lcd_A AT-rich interactive domain-containing protein 4A; tudor domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=36.54 E-value=11 Score=28.53 Aligned_cols=38 Identities=24% Similarity=0.272 Sum_probs=32.6
Q ss_pred cCCCCCCcEEEEecCCCCCceEEEEEEeEeCC-eEEEEEec
Q psy6234 125 KSRFRVDMNLEVVDKKRISQVKVATIEKIVGK-RLQVHYYD 164 (260)
Q Consensus 125 ~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~-rl~v~~~~ 164 (260)
+...++|..+|+..+.+ .+.-|+|.++.+. .|.|.|||
T Consensus 54 kG~l~vG~~ve~~~~~~--~~~~~~I~~i~D~S~YtVVFdD 92 (118)
T 2lcd_A 54 KGPLRVGAIVETRTSDG--SFQEAIISKLTDASWYTVVFDD 92 (118)
Confidence 56789999999999854 8888999999976 78999987
No 92
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=30.35 E-value=1.1e+02 Score=19.84 Aligned_cols=39 Identities=21% Similarity=0.331 Sum_probs=31.3
Q ss_pred CcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeC--CEEEEEEcccC
Q psy6234 7 NISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAG--YKALLRYEGFG 56 (260)
Q Consensus 7 ~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G--~rl~lr~~G~~ 56 (260)
.+++|+..-+.-.. + ..+.-|+|.++.+ +.+.+.|.+|+
T Consensus 8 ~~~vGd~c~A~~s~----------D-g~wYrA~I~~v~~~~~~~~V~fvdYG 48 (64)
T 4a4f_A 8 SWKVGDKCMAVWSE----------D-GQCYEAEIEEIDEENGTAAITFAGYG 48 (64)
T ss_dssp CCCTTCEEEEECTT----------T-SSEEEEEEEEEETTTTEEEEEETTTT
T ss_pred CCCCCCEEEEEECC----------C-CCEEEEEEEEEcCCCCEEEEEEEecC
Confidence 57899999987421 1 3588999999996 78999999996
No 93
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=29.19 E-value=1e+02 Score=24.09 Aligned_cols=34 Identities=9% Similarity=0.233 Sum_probs=26.6
Q ss_pred CcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEE
Q psy6234 7 NISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRY 52 (260)
Q Consensus 7 ~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~ 52 (260)
.+++||.+++.+.+ ...-.++|+++-|.++.+=|
T Consensus 84 ~~~~G~~~~~~~~~------------G~~~~~~V~~v~~~~v~vD~ 117 (158)
T 3cgm_A 84 EVVPGAQFYAQDME------------GNPMPLTVVAVEGEEVTVDF 117 (158)
T ss_dssp CCCTTCEEEEEETT------------TEEEEEEEEEEETTEEEEEC
T ss_pred CCccCCEEEEECCC------------CCEEEEEEEEECCCEEEEeC
Confidence 58899999988642 23557899999999887655
No 94
>3mea_A SAGA-associated factor 29 homolog; structural genomics consortium, SGC, nucleus, transcription, transcription regulation, chromosomal protein, DNA-binding; HET: M3L; 1.26A {Homo sapiens} PDB: 3meu_A* 3met_A* 3me9_A* 3mev_A* 3lx7_A 3mew_A
Probab=28.27 E-value=1.3e+02 Score=24.29 Aligned_cols=41 Identities=12% Similarity=-0.021 Sum_probs=32.5
Q ss_pred ccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEe---CCEEEEEEcccC
Q psy6234 5 WENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIA---GYKALLRYEGFG 56 (260)
Q Consensus 5 ~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~---G~rl~lr~~G~~ 56 (260)
+..|..|.+|-++-++. ..|.-|+|+..- .+..+|+|+|.+
T Consensus 114 ~~~f~~G~~VLAlYP~T-----------T~FY~A~V~~~p~~~~~~y~L~FEdde 157 (180)
T 3mea_A 114 EALFQKEQLVLALYPQT-----------TCFYRALIHAPPQRPQDDYSVLFEDTS 157 (180)
T ss_dssp GGSCCTTCEEEEECTTS-----------SEEEEEEEEECCSSTTCCEEEEEBCTT
T ss_pred cccCCCCCEEEEeCCCC-----------ceeeEEEEecCCCCCCCcEEEEEcCCC
Confidence 45799999999997641 469999999974 256889999954
No 95
>4he6_A Peptidase family U32; ultra-tight crystal packing, unknown function; 1.10A {Geobacillus thermoleovorans} PDB: 4he5_A
Probab=28.18 E-value=34 Score=23.92 Aligned_cols=18 Identities=17% Similarity=0.270 Sum_probs=15.7
Q ss_pred ccCCCCCCcEEEEecCCC
Q psy6234 124 VKSRFRVDMNLEVVDKKR 141 (260)
Q Consensus 124 ~~~~F~vGmkLEavD~~~ 141 (260)
.+++|.+|+.||.+-|.-
T Consensus 26 ~rN~f~~GD~iEi~~P~g 43 (89)
T 4he6_A 26 QRNHFRPGDEVEFFGPEI 43 (89)
T ss_dssp ESSCBCTTCEEEEESTTS
T ss_pred EcCCcCCCCEEEEEcCCC
Confidence 368999999999999864
No 96
>2l1t_A Uncharacterized protein; putative C-DI-GMP binding, GSU3033, PILZ, structural genomic biology, protein structure initiative; NMR {Geobacter sulfurreducens}
Probab=26.59 E-value=99 Score=22.98 Aligned_cols=39 Identities=10% Similarity=0.072 Sum_probs=30.4
Q ss_pred cCCCCCCcEEEEecCCCCCceE--EEEEEeEeCCeEEEEEe
Q psy6234 125 KSRFRVDMNLEVVDKKRISQVK--VATIEKIVGKRLQVHYY 163 (260)
Q Consensus 125 ~~~F~vGmkLEavD~~~~~~i~--vAtV~~v~g~rl~v~~~ 163 (260)
..-|.+|||+|+-=|+...... =|-|+++-++.+.|...
T Consensus 10 ~~yF~~gqrv~V~ipL~~~~~F~dwAiIt~~~~dli~lqLs 50 (109)
T 2l1t_A 10 GRYFEQLQKVNLTVRLGDTGSFDGTAAITSLKGSLAWLELF 50 (109)
T ss_dssp GGTCCTTCEEEEEEEETTTEEEEEEEEEEEEETTEEEECCS
T ss_pred HHhcCCCcEEEEEEEcCCCCeEcCceEEEEecCCEEEEEee
Confidence 3569999999998887755443 48899999998888543
No 97
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=25.85 E-value=1.4e+02 Score=22.92 Aligned_cols=34 Identities=18% Similarity=0.308 Sum_probs=26.8
Q ss_pred CcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEE
Q psy6234 7 NISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRY 52 (260)
Q Consensus 7 ~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~ 52 (260)
.+++||.+++.+.+ ...-.++|+++-+.++.|=|
T Consensus 93 ~~~~G~~~~~~~~~------------G~~~~~~V~~v~~~~v~vD~ 126 (151)
T 2kr7_A 93 ELEKGMSVFGQTED------------NQTIQAIIKDFSATHVMVDY 126 (151)
T ss_dssp CCCTTCEEEEEETT------------TEEEEEEEEEECSSEEEEEE
T ss_pred CCccCCEEEEECCC------------CCEEEEEEEEECCCEEEEEC
Confidence 57899999998653 23457899999999988766
No 98
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.57 E-value=1.1e+02 Score=19.80 Aligned_cols=37 Identities=19% Similarity=0.168 Sum_probs=28.8
Q ss_pred cCCCCCCcEEEEecCCCCCceEEEEEEeEeCCeEEEEEe
Q psy6234 125 KSRFRVDMNLEVVDKKRISQVKVATIEKIVGKRLQVHYY 163 (260)
Q Consensus 125 ~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g~rl~v~~~ 163 (260)
...|++|..+|+++= |..=-.|+|.++.+.++.|...
T Consensus 5 ~~~f~~GD~V~V~~G--pf~g~~G~V~evd~e~v~V~v~ 41 (59)
T 2e6z_A 5 SSGFQPGDNVEVCEG--ELINLQGKILSVDGNKITIMPK 41 (59)
T ss_dssp CSSCCTTSEEEECSS--TTTTCEEEECCCBTTEEEEEEC
T ss_pred cccCCCCCEEEEeec--CCCCCEEEEEEEeCCEEEEEEE
Confidence 457999999999983 2344578999999998887764
No 99
>2fhd_A RAD9 homolog, DNA repair protein RHP9/CRB2; tamdem tudor domains, cell cycle; HET: DNA MSE PO4; 2.40A {Schizosaccharomyces pombe}
Probab=24.43 E-value=82 Score=24.76 Aligned_cols=25 Identities=24% Similarity=0.069 Sum_probs=20.0
Q ss_pred CCCCceEEEEEEeEe------CCeEEEEEec
Q psy6234 140 KRISQVKVATIEKIV------GKRLQVHYYD 164 (260)
Q Consensus 140 ~~~~~i~vAtV~~v~------g~rl~v~~~~ 164 (260)
-.|+.+.|||.+... ..||+|+|||
T Consensus 18 G~p~~YYPATcvg~~~~~~~~~~~y~VrFdD 48 (153)
T 2fhd_A 18 GYPSFYYPATLVAPVHSAVTSSIMYKVQFDD 48 (153)
T ss_dssp SSSCCEEEEEEEEEECCSSCCBCEEEEEETT
T ss_pred CCcccccceEEEccCCCcccCCeEEEEEEcC
Confidence 346889999998776 3489999988
No 100
>3pnw_C Tudor domain-containing protein 3; FAB, structural genomics consortium, antibody, SGC, protein immune system complex; 2.05A {Homo sapiens}
Probab=23.47 E-value=1.8e+02 Score=19.77 Aligned_cols=39 Identities=10% Similarity=0.076 Sum_probs=31.1
Q ss_pred cCCCCCCcEEEEecCCCCCceEEEEEEeEeC--CeEEEEEec
Q psy6234 125 KSRFRVDMNLEVVDKKRISQVKVATIEKIVG--KRLQVHYYD 164 (260)
Q Consensus 125 ~~~F~vGmkLEavD~~~~~~i~vAtV~~v~g--~rl~v~~~~ 164 (260)
...+++|+..-|.=..+ ...+-|+|+++.+ +.+.|.|.|
T Consensus 15 ~~~~kvGd~C~A~ys~D-g~wYRA~I~~i~~~~~~~~V~fvD 55 (77)
T 3pnw_C 15 AKMWKPGDECFALYWED-NKFYRAEVEALHSSGMTAVVKFID 55 (77)
T ss_dssp HTTCCTTCEEEEEETTT-TEEEEEEEEEECTTSSEEEEEETT
T ss_pred cCCCCcCCEEEEEECCC-CCEEEEEEEEEeCCCCEEEEEEEc
Confidence 35689999999986433 5789999999984 578899977
No 101
>2d9t_A Tudor domain-containing protein 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.34.9.1
Probab=22.83 E-value=1.8e+02 Score=19.68 Aligned_cols=39 Identities=15% Similarity=0.279 Sum_probs=30.5
Q ss_pred CcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeC--CEEEEEEcccC
Q psy6234 7 NISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAG--YKALLRYEGFG 56 (260)
Q Consensus 7 ~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G--~rl~lr~~G~~ 56 (260)
.+++|..+-+.-.. + ..+.=|+|+++.+ ..+.++|.+|+
T Consensus 9 ~~~~G~~c~A~~s~----------D-g~wYRA~I~~i~~~~~~~~V~fiDYG 49 (78)
T 2d9t_A 9 VWKPGDECFALYWE----------D-NKFYRAEVEALHSSGMTAVVKFTDYG 49 (78)
T ss_dssp CCCTTCEEEEECTT----------T-CCEEEEEEEEECSSSSEEEEEETTTT
T ss_pred CCCcCCEEEEEECC----------C-CCEEEEEEEEEeCCCCEEEEEEEcCC
Confidence 57889988887321 1 3588899999985 88999999987
No 102
>2b9s_B DNA topoisomerase I-like protein; vanadate complex, isomerase/DNA complex; HET: DNA; 2.27A {Leishmania donovani}
Probab=22.63 E-value=15 Score=24.52 Aligned_cols=19 Identities=26% Similarity=0.387 Sum_probs=15.1
Q ss_pred cCCCCceechhhhhcCCccc
Q psy6234 173 QDSPLIHPVGWARRTGHLIS 192 (260)
Q Consensus 173 ~~S~~I~PvGw~~~~g~~L~ 192 (260)
|..|+|. |.||.+++.|+.
T Consensus 22 YlDPRIt-vaWcKr~~VPie 40 (62)
T 2b9s_B 22 YIDPRII-CSWAKAQDVPIN 40 (62)
T ss_dssp TSCHHHH-HHHHHHTTCCGG
T ss_pred ccCchhh-hhhhhhcCCCHH
Confidence 4566666 889999999875
No 103
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=22.46 E-value=1.1e+02 Score=24.25 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=25.3
Q ss_pred CcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEeCCEEEEEE
Q psy6234 7 NISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIAGYKALLRY 52 (260)
Q Consensus 7 ~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~G~rl~lr~ 52 (260)
.+++||.|++.+.+ .. -.++|+++-+.++.|=|
T Consensus 89 ~~~~G~~~~~~~~~------------G~-~~~~V~~v~~~~V~vD~ 121 (171)
T 2k8i_A 89 ELQVGMRFLAETDQ------------GP-VPVEITAVEDDHVVVDG 121 (171)
T ss_dssp CCCTTCEEEEEETT------------EE-EEEEEEEECSSEEEEES
T ss_pred CccCCcEEEEECCC------------Cc-EEEEEEEEcCCEEEEeC
Confidence 57899999988652 23 48899999998877644
No 104
>1jb0_E Photosystem 1 reaction centre subunit IV; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: b.34.4.2 PDB: 3pcq_E*
Probab=21.94 E-value=39 Score=23.26 Aligned_cols=34 Identities=38% Similarity=0.788 Sum_probs=21.7
Q ss_pred cccccEEEEEeCCCCCCCCCCCCCCCcEE------EEEEEEE--eCCEEEEEEcc
Q psy6234 8 ISVGMKVEVENTDTDTPSGNHDNYPDSFW------VASVTQI--AGYKALLRYEG 54 (260)
Q Consensus 8 ~~~GmklEv~~~~~~~~~~~~~~~p~~~w------vA~V~~~--~G~rl~lr~~G 54 (260)
++.|.|+-+. .|.+|| ||+|-+- +-|-+.+||+-
T Consensus 1 i~RGskVrIl-------------R~ESYWyn~vGtVasVD~s~gi~YPV~VRFdk 42 (75)
T 1jb0_E 1 VQRGSKVKIL-------------RPESYWYNEVGTVASVDQTPGVKYPVIVRFDK 42 (75)
T ss_dssp CCTTCEEEEC-------------CTTCTTBTCEEEEEEECCCTTCSCCEEEECSS
T ss_pred CCCCCEEEEc-------------cccceeecCcceEEEEecCCCccccEEEEEee
Confidence 4567777765 356677 4555553 34558999975
No 105
>4fu6_A PC4 and SFRS1-interacting protein; structural genomics consortium, SGC, transcription; 2.10A {Homo sapiens} PDB: 2b8a_A 2nlu_A
Probab=20.12 E-value=1.1e+02 Score=23.67 Aligned_cols=52 Identities=13% Similarity=0.192 Sum_probs=37.1
Q ss_pred cCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEe-------CCEEEEEEcccCCCCCCCeeeeCCCCCeecc
Q psy6234 6 ENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIA-------GYKALLRYEGFGEDSSKDFWVNLCSSMVHPV 75 (260)
Q Consensus 6 ~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~-------G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPv 75 (260)
..|++|..|=+.-.+ ...|+|.|+... .+.++++|.|.. .-.|+... .|.|.
T Consensus 21 ~~f~~GdlVwaK~~g------------~p~WPa~V~~~~~~~~~~~~~~~~V~FfG~~----~~awv~~~--~l~~f 79 (153)
T 4fu6_A 21 RDFKPGDLIFAKMKG------------YPHWPARVDEVPDGAVKPPTNKLPIFFFGTH----ETAFLGPK--DIFPY 79 (153)
T ss_dssp GGCCTTCEEEECCTT------------SCCEEEEECCCC---CCCCTTCEEEEETTTC----CEEEECGG--GEEEH
T ss_pred cCCCCCCEEEEeCCC------------CCCCCEEEeEchhhccCCCCCEEEEEecCCC----CeEEeCHH--HccCh
Confidence 468899998876432 358999997653 457899999942 35787664 57776
No 106
>1ri0_A Hepatoma-derived growth factor; HDGF, HATH domain, PWWP domain, heparin-binding, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.9.2 PDB: 2b8a_A 2nlu_A
Probab=20.05 E-value=2.1e+02 Score=20.86 Aligned_cols=54 Identities=13% Similarity=0.169 Sum_probs=38.4
Q ss_pred ccCcccccEEEEEeCCCCCCCCCCCCCCCcEEEEEEEEEe-------CCEEEEEEcccCCCCCCCeeeeCCCCCeeccc
Q psy6234 5 WENISVGMKVEVENTDTDTPSGNHDNYPDSFWVASVTQIA-------GYKALLRYEGFGEDSSKDFWVNLCSSMVHPVG 76 (260)
Q Consensus 5 ~~~~~~GmklEv~~~~~~~~~~~~~~~p~~~wvA~V~~~~-------G~rl~lr~~G~~~d~~~dfW~~~~s~~ihPvG 76 (260)
-..|++|..|=+.-.+ ...|+|.|+.+- .+.++++|.|.. .--|+.. ..|.|..
T Consensus 17 ~~~~~~GdlVwaK~kG------------yP~WPa~V~~~p~~~~k~~~~~~~V~FFGt~----~~awv~~--~~l~pf~ 77 (110)
T 1ri0_A 17 QKEYKCGDLVFAKMKG------------YPHWPARIDEMPEAAVKSTANKYQVFFFGTH----ETAFLGP--KDLFPYE 77 (110)
T ss_dssp SSSCCTTCEEEEEETT------------EEEEEEEEECCCSSSSCCCSSCEEEEETTTT----EEEEECS--TTEECHH
T ss_pred cCCCCCCCEEEEEeCC------------CCCCCEEEecccHhhcCCCCCEEEEEEecCC----CEEEECH--HHccchh
Confidence 4578889988876542 468999999753 467899999842 2346654 5788875
Done!