BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6235
(76 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q01664|TFAP4_HUMAN Transcription factor AP-4 OS=Homo sapiens GN=TFAP4 PE=1 SV=2
Length = 338
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/51 (80%), Positives = 46/51 (90%), Gaps = 2/51 (3%)
Query: 26 LTPCT--DKEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSKT 74
LTP T D+E+RIRREIANSNERRRMQSINAGFQSL+TL+PH +GEKLSK
Sbjct: 36 LTPETQRDQERRIRREIANSNERRRMQSINAGFQSLKTLIPHTDGEKLSKA 86
>sp|P34474|HLH11_CAEEL Helix-loop-helix protein 11 OS=Caenorhabditis elegans GN=hlh-11
PE=4 SV=3
Length = 431
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 36/43 (83%)
Query: 31 DKEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSK 73
D+ R+RR+IAN NERRRMQSINAGF +LR LLP EGEKLSK
Sbjct: 107 DRRSRMRRQIANCNERRRMQSINAGFLALRALLPRKEGEKLSK 149
>sp|B6VQA1|DIMM_DROME Protein dimmed OS=Drosophila melanogaster GN=dimm PE=1 SV=1
Length = 390
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 32 KEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGE-KLSK 73
KE+ +RR +N ER RM S+N FQSLR ++PH E E +LSK
Sbjct: 152 KERNMRRLESNERERMRMHSLNDAFQSLREVIPHVEMERRLSK 194
>sp|Q10574|LIN32_CAEEL Protein lin-32 OS=Caenorhabditis elegans GN=lin-32 PE=1 SV=2
Length = 142
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 35 RIRREIANSNERRRMQSINAGFQSLRTLLPHHE-GEKLSK 73
R+RR AN ERRRM ++N + LR +LP + G+KLSK
Sbjct: 71 RMRRSAANERERRRMNTLNVAYDELREVLPEIDSGKKLSK 110
>sp|O13126|ATO7B_XENLA Protein atonal homolog 7-B OS=Xenopus laevis GN=atoh7-b PE=1 SV=1
Length = 138
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 14 ENESPPRGPSH--LLTPC--TDKEKRI-----RREIANSNERRRMQSINAGFQSLRTLLP 64
+++SP G SH +PC + R+ RR AN+ ERRRMQ +N F SLR ++P
Sbjct: 2 KSDSPVHGESHTECQSPCPLSCMPARLEGSTKRRLAANARERRRMQGLNTAFDSLRKVVP 61
Query: 65 HH-EGEKLSK 73
E +KLSK
Sbjct: 62 QWGEDKKLSK 71
>sp|Q8MIE7|TWST1_NOMCO Twist-related protein 1 OS=Nomascus concolor GN=TWIST1 PE=3 SV=1
Length = 204
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 28 PCTDKEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSK 73
P + +E + +R +AN ER+R QS+N F +LR ++P +KLSK
Sbjct: 102 PQSYEELQTQRVMANVRERQRTQSLNEAFAALRKIIPTLPSDKLSK 147
>sp|O13125|ATO7A_XENLA Protein atonal homolog 7-A OS=Xenopus laevis GN=atoh7-a PE=1 SV=1
Length = 138
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 37 RREIANSNERRRMQSINAGFQSLRTLLPHH-EGEKLSK 73
RR AN+ ERRRMQ +N F SLR ++P E ++LSK
Sbjct: 34 RRLAANARERRRMQGLNTAFDSLRKVVPQWGEDKQLSK 71
>sp|Q8MIB9|TWST1_PONPY Twist-related protein 1 OS=Pongo pygmaeus GN=TWIST1 PE=3 SV=1
Length = 203
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 28 PCTDKEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSK 73
P + +E + +R +AN ER+R QS+N F +LR ++P +KLSK
Sbjct: 101 PQSYEELQTQRVMANVRERQRTQSLNEAFAALRKIIPTLPSDKLSK 146
>sp|Q7JGP2|TWST1_MACTO Twist-related protein 1 OS=Macaca tonkeana GN=TWIST1 PE=3 SV=1
Length = 201
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 28 PCTDKEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSK 73
P + +E + +R +AN ER+R QS+N F +LR ++P +KLSK
Sbjct: 99 PQSYEELQTQRVMANVRERQRTQSLNEAFAALRKIIPTLPSDKLSK 144
>sp|Q15672|TWST1_HUMAN Twist-related protein 1 OS=Homo sapiens GN=TWIST1 PE=1 SV=1
Length = 202
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 28 PCTDKEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSK 73
P + +E + +R +AN ER+R QS+N F +LR ++P +KLSK
Sbjct: 100 PQSYEELQTQRVMANVRERQRTQSLNEAFAALRKIIPTLPSDKLSK 145
>sp|Q8MIH8|TWST1_CEBCA Twist-related protein 1 OS=Cebus capucinus GN=TWIST1 PE=3 SV=1
Length = 207
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 28 PCTDKEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSK 73
P + +E + +R +AN ER+R QS+N F +LR ++P +KLSK
Sbjct: 105 PQSYEELQTQRVMANVRERQRTQSLNEAFAALRKIIPTLPSDKLSK 150
>sp|Q4ZHW1|PTF1A_XENLA Pancreas transcription factor 1 subunit alpha OS=Xenopus laevis
GN=ptf1a PE=2 SV=1
Length = 270
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 30 TDKEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEK-LSKT 74
+D E + R+ AN ERRRMQSIN F+ LR+ +P EK LSK
Sbjct: 113 SDAEMQQLRQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKV 158
>sp|Q8MIB5|TWST1_SAGOE Twist-related protein 1 OS=Saguinus oedipus GN=TWIST1 PE=3 SV=1
Length = 203
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 28 PCTDKEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSK 73
P + +E + +R +AN ER+R QS+N F +LR ++P +KLSK
Sbjct: 101 PQSYEELQTQRVMANVRERQRTQSLNEAFAALRKIIPTLPSDKLSK 146
>sp|P26687|TWST1_MOUSE Twist-related protein 1 OS=Mus musculus GN=Twist1 PE=1 SV=1
Length = 206
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 28 PCTDKEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSK 73
P + +E + +R +AN ER+R QS+N F +LR ++P +KLSK
Sbjct: 104 PQSYEELQTQRVMANVRERQRTQSLNEAFAALRKIIPTLPSDKLSK 149
>sp|Q8MID5|TWST1_MICMU Twist-related protein 1 OS=Microcebus murinus GN=TWIST1 PE=3 SV=1
Length = 199
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 28 PCTDKEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSK 73
P + +E + +R +AN ER+R QS+N F +LR ++P +KLSK
Sbjct: 97 PQSYEELQTQRVMANVRERQRTQSLNEAFAALRKIIPTLPSDKLSK 142
>sp|Q8MIF3|TWST1_EULFU Twist-related protein 1 OS=Eulemur fulvus fulvus GN=TWIST1 PE=3
SV=1
Length = 198
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 28 PCTDKEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSK 73
P + +E + +R +AN ER+R QS+N F +LR ++P +KLSK
Sbjct: 96 PQSYEELQTQRVMANVRERQRTQSLNEAFAALRKIIPTLPSDKLSK 141
>sp|Q90YI8|TAL1_TAKRU T-cell acute lymphocytic leukemia protein 1 OS=Takifugu rubripes
GN=tal1 PE=2 SV=1
Length = 371
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 31 DKEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGE-KLSK 73
D+ K +RR NS ER R Q++N F LR L+P H + KLSK
Sbjct: 199 DEAKIVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSK 242
>sp|O57598|ATOH7_CHICK Protein atonal homolog 7 OS=Gallus gallus GN=ATOH7 PE=1 SV=2
Length = 151
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 12 GSENESPPRGPSHLLTPCTDK---EKRIRREIANSNERRRMQSINAGFQSLRTLLPHH-E 67
G E++ R S + C+ + RR AN+ ERRRMQ +N F LR ++P +
Sbjct: 12 GVESDIQCRSGSGCVVKCSTERMESAAKRRLAANARERRRMQGLNTAFDRLRKVVPQWGQ 71
Query: 68 GEKLSK 73
+KLSK
Sbjct: 72 DKKLSK 77
>sp|P13903|TWIST_XENLA Twist-related protein OS=Xenopus laevis GN=twist1 PE=2 SV=1
Length = 166
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 27 TPCTDKEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSK 73
+P + +E + +R +AN ER+R QS+N F SLR ++P +KLSK
Sbjct: 63 SPQSFEELQSQRVMANVRERQRTQSLNEAFSSLRKIIPTLPSDKLSK 109
>sp|O96642|TWIST_BRABE Twist-related protein OS=Branchiostoma belcheri GN=TWIST PE=2 SV=1
Length = 196
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 37 RREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSK 73
+R +AN ER+R QS+N F SLR ++P +KLSK
Sbjct: 96 QRVLANVRERQRTQSLNEAFSSLRKIIPTLPSDKLSK 132
>sp|P48987|ATO_DROME Protein atonal OS=Drosophila melanogaster GN=ato PE=2 SV=2
Length = 312
Score = 38.5 bits (88), Expect = 0.014, Method: Composition-based stats.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 34 KRIRREIANSNERRRMQSINAGFQSLRTLLP 64
KR RR AN+ ERRRMQ++N F LR LP
Sbjct: 253 KRKRRLAANARERRRMQNLNQAFDRLRQYLP 283
>sp|O73823|TAL1_XENLA T-cell acute lymphocytic leukemia protein 1 OS=Xenopus laevis
GN=tal1 PE=2 SV=1
Length = 394
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 32 KEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGE-KLSK 73
+ K +RR NS ER R Q++N F LR L+P H + KLSK
Sbjct: 258 QPKVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSK 300
>sp|Q8MI06|TWST1_GORGO Twist-related protein 1 OS=Gorilla gorilla gorilla GN=TWIST1 PE=3
SV=1
Length = 203
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 28 PCTDKEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSK 73
P + +E + +R +AN ER+R QS+N F +LR ++P +KLSK
Sbjct: 101 PQSCEELQTQRVMANVRERQRTQSLNEPFAALRKIIPTLPSDKLSK 146
>sp|P17542|TAL1_HUMAN T-cell acute lymphocytic leukemia protein 1 OS=Homo sapiens GN=TAL1
PE=1 SV=2
Length = 331
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 34 KRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGE-KLSK 73
K +RR NS ER R Q++N F LR L+P H + KLSK
Sbjct: 185 KVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSK 225
>sp|P22091|TAL1_MOUSE T-cell acute lymphocytic leukemia protein 1 homolog OS=Mus musculus
GN=Tal1 PE=1 SV=1
Length = 329
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 34 KRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGE-KLSK 73
K +RR NS ER R Q++N F LR L+P H + KLSK
Sbjct: 185 KVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSK 225
>sp|Q7RTS3|PTF1A_HUMAN Pancreas transcription factor 1 subunit alpha OS=Homo sapiens
GN=PTF1A PE=1 SV=1
Length = 328
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 30 TDKEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEK-LSKT 74
++ E + R+ AN ERRRMQSIN F+ LR+ +P EK LSK
Sbjct: 157 SEAELQQLRQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKV 202
>sp|Q64305|PTF1A_RAT Pancreas transcription factor 1 subunit alpha OS=Rattus norvegicus
GN=Ptf1a PE=1 SV=1
Length = 326
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 30 TDKEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEK-LSKT 74
++ E + R+ AN ERRRMQSIN F+ LR+ +P EK LSK
Sbjct: 156 SEAELQQLRQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKV 201
>sp|P24899|TAL1_CHICK T-cell acute lymphocytic leukemia protein 1 homolog OS=Gallus
gallus GN=TAL1 PE=2 SV=1
Length = 311
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 34 KRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGE-KLSK 73
K +RR NS ER R Q++N F LR L+P H + KLSK
Sbjct: 177 KVVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSK 217
>sp|Q7ZSX3|PTF1A_DANRE Pancreas transcription factor 1 subunit alpha OS=Danio rerio
GN=ptf1a PE=2 SV=1
Length = 265
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 38 REIANSNERRRMQSINAGFQSLRTLLPHHEGEK-LSKT 74
R+ AN ERRRMQSIN F+ LR+ +P EK LSK
Sbjct: 117 RQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKV 154
>sp|Q60539|TCF15_MESAU Transcription factor 15 OS=Mesocricetus auratus GN=TCF15 PE=2 SV=1
Length = 195
Score = 37.0 bits (84), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 37 RREIANSNERRRMQSINAGFQSLRTLLPHHEGE-KLSK 73
+R+ AN+ ER R QS+N F +LRTL+P + KLSK
Sbjct: 71 QRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSK 108
>sp|Q12870|TCF15_HUMAN Transcription factor 15 OS=Homo sapiens GN=TCF15 PE=2 SV=3
Length = 199
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 37 RREIANSNERRRMQSINAGFQSLRTLLPHHEGE-KLSK 73
+R+ AN+ ER R QS+N F +LRTL+P + KLSK
Sbjct: 73 QRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSK 110
>sp|Q8AW52|ATOH7_DANRE Protein atonal homolog 7 OS=Danio rerio GN=atoh7 PE=1 SV=1
Length = 134
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 37 RREIANSNERRRMQSINAGFQSLRTLLPHH-EGEKLSK 73
RR AN+ ER+RMQ +N F LR ++P + +KLSK
Sbjct: 29 RRMAANARERKRMQGLNTAFDRLRKVVPQWGQDKKLSK 66
>sp|P79782|TCF15_CHICK Transcription factor 15 OS=Gallus gallus GN=TCF15 PE=2 SV=2
Length = 183
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 37 RREIANSNERRRMQSINAGFQSLRTLLPHHEGE-KLSK 73
+R+ AN+ ER R QS+N F +LRTL+P + KLSK
Sbjct: 62 QRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSK 99
>sp|O93507|TAL1_DANRE T-cell acute lymphocytic leukemia protein 1 homolog OS=Danio rerio
GN=tal1 PE=1 SV=1
Length = 324
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 34 KRIRREIANSNERRRMQSINAGFQSLRTLLPHH-EGEKLSK 73
K +RR NS ER R Q++N F LR L+P H +KLSK
Sbjct: 183 KIVRRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSK 223
>sp|Q8MI03|TWST1_PANTR Twist-related protein 1 OS=Pan troglodytes GN=TWIST1 PE=3 SV=1
Length = 201
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 28 PCTDKEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSK 73
P + +E + +R +AN ER+R QS+N F +L ++P +KLSK
Sbjct: 101 PQSYEELQTQRVMANVRERQRTQSLNEAFAALPKIIPTLPSDKLSK 146
>sp|Q9QX98|PTF1A_MOUSE Pancreas transcription factor 1 subunit alpha OS=Mus musculus
GN=Ptf1a PE=1 SV=1
Length = 324
Score = 36.6 bits (83), Expect = 0.044, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 30 TDKEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEK-LSK 73
++ E + R+ AN ERRRMQSIN F+ LR+ +P EK LSK
Sbjct: 154 SEAELQQLRQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSK 198
>sp|Q8I1G0|TWIST_DROER Protein twist OS=Drosophila erecta GN=twi PE=3 SV=1
Length = 490
Score = 36.6 bits (83), Expect = 0.045, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 37 RREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSK 73
+R +AN ER+R QS+N F+SL+ ++P +KLSK
Sbjct: 363 QRVMANVRERQRTQSLNDAFKSLQQIIPTLPSDKLSK 399
>sp|P10627|TWIST_DROME Protein twist OS=Drosophila melanogaster GN=twi PE=1 SV=2
Length = 490
Score = 36.6 bits (83), Expect = 0.046, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 37 RREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSK 73
+R +AN ER+R QS+N F+SL+ ++P +KLSK
Sbjct: 363 QRVMANVRERQRTQSLNDAFKSLQQIIPTLPSDKLSK 399
>sp|Q60756|TCF15_MOUSE Transcription factor 15 OS=Mus musculus GN=Tcf15 PE=1 SV=2
Length = 195
Score = 36.6 bits (83), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
Query: 37 RREIANSNERRRMQSINAGFQSLRTLLPHHEGE-KLSK 73
+R+ AN+ ER R QS+N F +LRTL+P + KLSK
Sbjct: 71 QRQAANARERDRTQSVNTAFTALRTLIPTEPVDRKLSK 108
>sp|Q8MIH1|TWST1_CALJA Twist-related protein 1 OS=Callithrix jacchus GN=TWIST1 PE=3 SV=1
Length = 203
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 28 PCTDKEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSK 73
P + +E + +R +AN R+R QS+N F +LR ++P +KLSK
Sbjct: 101 PQSYEELQTQRVMANVRGRQRTQSLNEAFAALRKIIPTLPSDKLSK 146
>sp|P97831|TWST2_RAT Twist-related protein 2 OS=Rattus norvegicus GN=Twist2 PE=2 SV=2
Length = 160
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 9 SNLGSENESP---PRGPSHLLTPCTDKEKRIRREIANSNERRRMQSINAGFQSLRTLLPH 65
S SE+ SP RG + + +E + +R +AN ER+R QS+N F +LR ++P
Sbjct: 36 SKKSSEDGSPTPGKRGKKGSPSAQSFEELQSQRILANVRERQRTQSLNEAFAALRKIIPT 95
Query: 66 HEGEKLSK 73
+KLSK
Sbjct: 96 LPSDKLSK 103
>sp|Q8WVJ9|TWST2_HUMAN Twist-related protein 2 OS=Homo sapiens GN=TWIST2 PE=1 SV=1
Length = 160
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 9 SNLGSENESP---PRGPSHLLTPCTDKEKRIRREIANSNERRRMQSINAGFQSLRTLLPH 65
S SE+ SP RG + + +E + +R +AN ER+R QS+N F +LR ++P
Sbjct: 36 SKKSSEDGSPTPGKRGKKGSPSAQSFEELQSQRILANVRERQRTQSLNEAFAALRKIIPT 95
Query: 66 HEGEKLSK 73
+KLSK
Sbjct: 96 LPSDKLSK 103
>sp|Q9D030|TWST2_MOUSE Twist-related protein 2 OS=Mus musculus GN=Twist2 PE=1 SV=1
Length = 160
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 9 SNLGSENESP---PRGPSHLLTPCTDKEKRIRREIANSNERRRMQSINAGFQSLRTLLPH 65
S SE+ SP RG + + +E + +R +AN ER+R QS+N F +LR ++P
Sbjct: 36 SKKSSEDGSPTPGKRGKKGSPSAQSFEELQSQRILANVRERQRTQSLNEAFAALRKIIPT 95
Query: 66 HEGEKLSK 73
+KLSK
Sbjct: 96 LPSDKLSK 103
>sp|P57102|HAND2_DANRE Heart- and neural crest derivatives-expressed protein 2 OS=Danio
rerio GN=hand2 PE=2 SV=1
Length = 208
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 37 RREIANSNERRRMQSINAGFQSLRTLLPHHEGE-KLSK 73
RR AN ERRR QSIN+ F LR +P+ + KLSK
Sbjct: 91 RRPTANRKERRRTQSINSAFAELRECIPNVPADTKLSK 128
>sp|Q62414|NDF2_MOUSE Neurogenic differentiation factor 2 OS=Mus musculus GN=Neurod2 PE=1
SV=3
Length = 383
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 35 RIRREIANSNERRRMQSINAGFQSLRTLLP-HHEGEKLSK 73
++RR+ AN+ ER RM +NA +LR ++P + + +KLSK
Sbjct: 121 KLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSK 160
>sp|Q9GNV2|TWIST_PODCA Twist-related protein OS=Podocoryne carnea GN=TWIST PE=2 SV=1
Length = 199
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 34 KRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSK 73
++ R IAN ER+R Q++N F +LR ++P +KLSK
Sbjct: 49 QKTHRVIANIRERQRTQALNQSFSTLRKIIPTLPSDKLSK 88
>sp|Q63689|NDF2_RAT Neurogenic differentiation factor 2 OS=Rattus norvegicus GN=Neurod2
PE=1 SV=2
Length = 382
Score = 35.8 bits (81), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 35 RIRREIANSNERRRMQSINAGFQSLRTLLP-HHEGEKLSK 73
++RR+ AN+ ER RM +NA +LR ++P + + +KLSK
Sbjct: 120 KLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSK 159
>sp|Q15784|NDF2_HUMAN Neurogenic differentiation factor 2 OS=Homo sapiens GN=NEUROD2 PE=2
SV=2
Length = 382
Score = 35.8 bits (81), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 35 RIRREIANSNERRRMQSINAGFQSLRTLLP-HHEGEKLSK 73
++RR+ AN+ ER RM +NA +LR ++P + + +KLSK
Sbjct: 120 KLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSK 159
>sp|Q90690|HAND2_CHICK Heart- and neural crest derivatives-expressed protein 2 OS=Gallus
gallus GN=HAND2 PE=2 SV=1
Length = 216
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 37 RREIANSNERRRMQSINAGFQSLRTLLPHHEGE-KLSK 73
RR AN ERRR QSIN+ F LR +P+ + KLSK
Sbjct: 99 RRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSK 136
>sp|P61295|HAND2_RAT Heart- and neural crest derivatives-expressed protein 2 OS=Rattus
norvegicus GN=Hand2 PE=2 SV=1
Length = 217
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 37 RREIANSNERRRMQSINAGFQSLRTLLPHHEGE-KLSK 73
RR AN ERRR QSIN+ F LR +P+ + KLSK
Sbjct: 100 RRGTANRKERRRTQSINSAFAELRECIPNVPADTKLSK 137
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,337,340
Number of Sequences: 539616
Number of extensions: 839921
Number of successful extensions: 2494
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2333
Number of HSP's gapped (non-prelim): 174
length of query: 76
length of database: 191,569,459
effective HSP length: 47
effective length of query: 29
effective length of database: 166,207,507
effective search space: 4820017703
effective search space used: 4820017703
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)