Query psy6235
Match_columns 76
No_of_seqs 116 out of 466
Neff 4.3
Searched_HMMs 29240
Date Fri Aug 16 21:14:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6235.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6235hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1mdy_A Protein (MYOD BHLH doma 99.6 1.2E-15 4.2E-20 93.6 5.0 44 32-75 7-50 (68)
2 2ql2_B Neurod1, neurogenic dif 99.6 1.5E-15 5.2E-20 91.1 4.6 39 37-75 2-41 (60)
3 2lfh_A DNA-binding protein inh 99.3 6.2E-14 2.1E-18 86.9 -1.0 36 40-75 17-53 (68)
4 4aya_A DNA-binding protein inh 99.1 2.2E-11 7.6E-16 79.6 2.9 42 34-75 21-64 (97)
5 1hlo_A Protein (transcription 98.9 6.5E-10 2.2E-14 68.6 3.7 42 34-75 9-50 (80)
6 1nkp_B MAX protein, MYC proto- 98.9 1.3E-09 4.4E-14 67.4 3.3 39 37-75 2-40 (83)
7 3u5v_A Protein MAX, transcript 98.8 4.1E-10 1.4E-14 70.0 0.5 39 36-74 4-44 (76)
8 1nkp_A C-MYC, MYC proto-oncoge 98.6 2.8E-08 9.7E-13 62.7 3.9 42 34-75 3-45 (88)
9 1nlw_A MAD protein, MAX dimeri 98.4 4.5E-07 1.5E-11 56.5 4.8 37 38-74 2-39 (80)
10 1an4_A Protein (upstream stimu 98.2 1.4E-06 4.6E-11 51.5 3.4 39 37-75 5-47 (65)
11 1am9_A Srebp-1A, protein (ster 98.0 4.8E-06 1.6E-10 51.6 3.2 40 34-74 3-42 (82)
12 4h10_B Circadian locomoter out 97.4 0.00013 4.5E-09 44.8 3.7 40 34-74 5-44 (71)
13 4h10_A ARYL hydrocarbon recept 97.4 0.00012 4.3E-09 44.8 3.0 42 33-74 5-48 (73)
14 1a0a_A BHLH, protein (phosphat 97.1 0.00046 1.6E-08 41.0 3.5 38 37-74 2-44 (63)
15 4ati_A MITF, microphthalmia-as 97.1 0.00037 1.3E-08 45.7 3.2 41 34-74 24-66 (118)
16 4f3l_A Mclock, circadian locom 96.4 0.0017 5.7E-08 47.4 2.7 41 33-74 8-48 (361)
17 4f3l_B BMAL1B; BHLH, PAS, circ 93.2 0.03 1E-06 41.4 1.4 41 34-74 10-52 (387)
18 3muj_A Transcription factor CO 69.8 3.2 0.00011 28.2 2.7 25 50-74 94-120 (138)
19 4ath_A MITF, microphthalmia-as 62.5 6.7 0.00023 24.4 2.9 24 51-74 6-31 (83)
20 1faf_A Large T antigen; J doma 49.7 12 0.00041 21.8 2.5 17 47-63 50-66 (79)
21 2guz_A Mitochondrial import in 45.4 15 0.0005 20.9 2.3 16 47-62 52-67 (71)
22 1iur_A KIAA0730 protein; DNAJ 43.9 24 0.00081 21.2 3.2 22 46-67 57-78 (88)
23 2dn9_A DNAJ homolog subfamily 35.9 24 0.00083 19.9 2.2 16 46-61 47-62 (79)
24 2dmx_A DNAJ homolog subfamily 35.4 24 0.00083 20.6 2.2 15 47-61 51-65 (92)
25 2ctr_A DNAJ homolog subfamily 34.5 26 0.00088 20.5 2.2 16 46-61 46-61 (88)
26 2cug_A Mkiaa0962 protein; DNAJ 34.0 26 0.0009 20.4 2.2 16 46-61 56-71 (88)
27 2ej7_A HCG3 gene; HCG3 protein 31.9 24 0.00083 20.1 1.8 15 47-61 51-65 (82)
28 2ctp_A DNAJ homolog subfamily 30.8 28 0.00095 19.7 1.9 16 46-61 46-61 (78)
29 2ys8_A RAB-related GTP-binding 28.8 41 0.0014 19.8 2.5 17 47-63 67-83 (90)
30 2o37_A Protein SIS1; HSP40, J- 27.6 31 0.0011 20.3 1.7 15 47-61 46-60 (92)
31 1wjz_A 1700030A21RIK protein; 27.4 32 0.0011 20.0 1.8 15 47-61 63-77 (94)
32 1hdj_A Human HSP40, HDJ-1; mol 26.2 28 0.00096 19.6 1.3 16 46-61 42-57 (77)
33 2och_A Hypothetical protein DN 25.9 39 0.0013 18.8 1.9 15 47-61 46-60 (73)
34 2lgw_A DNAJ homolog subfamily 25.7 44 0.0015 20.2 2.2 15 47-61 44-58 (99)
35 1gk7_A Vimentin; intermediate 25.0 56 0.0019 17.3 2.3 16 43-58 2-17 (39)
36 2qsa_A DNAJ homolog DNJ-2; J-d 24.9 46 0.0016 20.0 2.2 16 46-61 59-74 (109)
37 1gh6_A Large T antigen; tumor 23.3 36 0.0012 21.3 1.6 16 47-62 47-62 (114)
38 2yua_A Williams-beuren syndrom 22.9 35 0.0012 20.3 1.4 16 46-61 57-72 (99)
39 2ctw_A DNAJ homolog subfamily 22.6 45 0.0015 20.3 1.9 16 46-61 57-72 (109)
40 1d8b_A SGS1 RECQ helicase; fiv 21.8 48 0.0016 20.5 1.9 12 51-62 4-15 (81)
41 2ctq_A DNAJ homolog subfamily 21.6 58 0.002 19.8 2.2 16 46-61 60-75 (112)
42 2a9s_A Competence/damage-induc 21.4 58 0.002 21.9 2.4 23 41-63 144-166 (171)
No 1
>1mdy_A Protein (MYOD BHLH domain); protein-DNA complex, transcription/DNA complex; HET: DNA; 2.80A {Mus musculus} SCOP: a.38.1.1 PDB: 1mdy_B*
Probab=99.59 E-value=1.2e-15 Score=93.62 Aligned_cols=44 Identities=27% Similarity=0.456 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCccc
Q psy6235 32 KEKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSKTI 75 (76)
Q Consensus 32 ~~~~~rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~p~~KLSKi~ 75 (76)
.....+|.++|+|||.||++||.||+.||.+||..|++|||||.
T Consensus 7 ~~~~~rR~~aN~rER~R~~~iN~af~~LR~~iP~~~~~KlSKi~ 50 (68)
T 1mdy_A 7 TTNADRRKAATMRERRRLSKVNEAFETLKRSTSSNPNQRLPKVE 50 (68)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSCTTSCCCHHH
T ss_pred CCchhhhhHhhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHH
Confidence 45678999999999999999999999999999998888999974
No 2
>2ql2_B Neurod1, neurogenic differentiation factor 1; basic-helix-loop-helix; HET: DNA; 2.50A {Mus musculus}
Probab=99.58 E-value=1.5e-15 Score=91.08 Aligned_cols=39 Identities=44% Similarity=0.616 Sum_probs=36.4
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhhCCCCC-CCCCCccc
Q psy6235 37 RREIANSNERRRMQSINAGFQSLRTLLPHHE-GEKLSKTI 75 (76)
Q Consensus 37 rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~p-~~KLSKi~ 75 (76)
+|.++|+|||.||++||.||+.||.+||..| ++|||||.
T Consensus 2 rR~~~N~rER~R~~~iN~af~~LR~~lP~~~~~~klSKi~ 41 (60)
T 2ql2_B 2 RRMKANARERNRMHGLNAALDNLRKVVPCYSKTQKLSKIE 41 (60)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCSSSCCCHHH
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHccCCCCcCcCCHHH
Confidence 7899999999999999999999999999987 57999984
No 3
>2lfh_A DNA-binding protein inhibitor ID-3; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=99.33 E-value=6.2e-14 Score=86.91 Aligned_cols=36 Identities=22% Similarity=0.296 Sum_probs=33.2
Q ss_pred HHhHHHHHHHHHHHHHHHHHHhhCCCCCC-CCCCccc
Q psy6235 40 IANSNERRRMQSINAGFQSLRTLLPHHEG-EKLSKTI 75 (76)
Q Consensus 40 ~aN~RER~Rm~~lN~AF~~LR~~lP~~p~-~KLSKi~ 75 (76)
.||+|||.||++||.||+.||.+||+.|. +|||||.
T Consensus 17 ~a~erER~Rm~~lN~aF~~LR~~VP~~p~~kKLSKiE 53 (68)
T 2lfh_A 17 PAAEEPLSLLDDMNHCYSRLRELVPGVPRGTQLSQVE 53 (68)
T ss_dssp CCBCCCSCSSSHHHHHHHHHHHHCCCCCTTCCCCHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHCCCCCCCCCccHHH
Confidence 57899999999999999999999999985 6999984
No 4
>4aya_A DNA-binding protein inhibitor ID-2; cell cycle; 2.10A {Homo sapiens}
Probab=99.12 E-value=2.2e-11 Score=79.60 Aligned_cols=42 Identities=21% Similarity=0.297 Sum_probs=29.9
Q ss_pred HHHHHHHH-hHHHHHHHHHHHHHHHHHHhhCCCCC-CCCCCccc
Q psy6235 34 KRIRREIA-NSNERRRMQSINAGFQSLRTLLPHHE-GEKLSKTI 75 (76)
Q Consensus 34 ~~~rR~~a-N~RER~Rm~~lN~AF~~LR~~lP~~p-~~KLSKi~ 75 (76)
....|.++ ..+||.||++||.||+.||.+||+.| ++|||||.
T Consensus 21 ~~i~R~k~~~~~~r~Rm~~lN~AF~~LR~~vP~~p~~kKLSKIE 64 (97)
T 4aya_A 21 LGISRSKTPVDDPMSLLYNMNDCYSKLKELVPSIPQNKKVSKME 64 (97)
T ss_dssp ----------CCHHHHHHHHHHHHHHHHHHCTTSCSSSCCCHHH
T ss_pred HHHHHHhcccccHHHHHHHHHHHHHHHHHHCCCCCCCCcccHHH
Confidence 33344433 46679999999999999999999987 56999984
No 5
>1hlo_A Protein (transcription factor MAX); transcriptional regulation, DNA binding, complex (transcription factor MAX/DNA), transcription/DNA complex; HET: DNA; 2.80A {Homo sapiens} SCOP: a.38.1.1
Probab=98.93 E-value=6.5e-10 Score=68.57 Aligned_cols=42 Identities=36% Similarity=0.507 Sum_probs=38.2
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCccc
Q psy6235 34 KRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSKTI 75 (76)
Q Consensus 34 ~~~rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~p~~KLSKi~ 75 (76)
...+|...|.+||.|+..||.+|+.|+.+||..++.|+||+.
T Consensus 9 ~~~~R~~hn~~Er~RR~~in~~f~~Lr~lvP~~~~~k~sK~~ 50 (80)
T 1hlo_A 9 DADKRAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQ 50 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGTTSCCCHHH
T ss_pred hHHHHHHhhHHHHHHHHHHHHHHHHHHHHCcCCCCCCccHHH
Confidence 356889999999999999999999999999998888999864
No 6
>1nkp_B MAX protein, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1 PDB: 1an2_A* 1r05_A 1nlw_B
Probab=98.86 E-value=1.3e-09 Score=67.42 Aligned_cols=39 Identities=38% Similarity=0.579 Sum_probs=36.1
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCccc
Q psy6235 37 RREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSKTI 75 (76)
Q Consensus 37 rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~p~~KLSKi~ 75 (76)
+|...|.+||.|+..||.+|+.|+.+||..++.|+||+.
T Consensus 2 rR~~hn~~Er~RR~~in~~f~~Lr~lvP~~~~~k~sK~~ 40 (83)
T 1nkp_B 2 KRAHHNALERKRRDHIKDSFHSLRDSVPSLQGEKASRAQ 40 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSGGGTTSCCCHHH
T ss_pred hhhHhhhHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH
Confidence 688999999999999999999999999998888999863
No 7
>3u5v_A Protein MAX, transcription factor E2-alpha chimer; basic helix-loop-helix (BHLH); 1.70A {Mus musculus} PDB: 2ql2_A*
Probab=98.84 E-value=4.1e-10 Score=70.04 Aligned_cols=39 Identities=28% Similarity=0.394 Sum_probs=29.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHhhCCC-CCCCCC-Ccc
Q psy6235 36 IRREIANSNERRRMQSINAGFQSLRTLLPH-HEGEKL-SKT 74 (76)
Q Consensus 36 ~rR~~aN~RER~Rm~~lN~AF~~LR~~lP~-~p~~KL-SKi 74 (76)
.+|...|++||.|+..||.+|+.||.+||. .+++|. ||+
T Consensus 4 ~rR~~hN~~ER~Rr~~IN~~f~~Lr~~vP~~~~~~K~~sK~ 44 (76)
T 3u5v_A 4 DKRAHHNALERKRRRDINEAFRELGRMCQMHLKSDKAQTKL 44 (76)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
T ss_pred hHHhhchHHHhhhHHHHHHHHHHHHHHcCCCCCccccccHH
Confidence 578899999999999999999999999995 555554 786
No 8
>1nkp_A C-MYC, MYC proto-oncogene protein; transcription, DNA, BHLHZ, heterodimer, transcription/DNA complex; 1.80A {Homo sapiens} SCOP: a.38.1.1
Probab=98.62 E-value=2.8e-08 Score=62.74 Aligned_cols=42 Identities=31% Similarity=0.502 Sum_probs=37.4
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhhCCCCC-CCCCCccc
Q psy6235 34 KRIRREIANSNERRRMQSINAGFQSLRTLLPHHE-GEKLSKTI 75 (76)
Q Consensus 34 ~~~rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~p-~~KLSKi~ 75 (76)
...+|...|..||.|...||.+|+.|+.+||..+ +.|+||+.
T Consensus 3 d~~~R~~Hn~~ER~RR~~ln~~f~~Lr~~vP~~~~~~K~sK~~ 45 (88)
T 1nkp_A 3 MNVKRRTHNVLERQRRNELKRSFFALRDQIPELENNEKAPKVV 45 (88)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCGGGTTCTTCCHHH
T ss_pred ChhhhhhhhHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH
Confidence 3457999999999999999999999999999986 57999863
No 9
>1nlw_A MAD protein, MAX dimerizer; transcription factor, DNA, BHLHZ, transcription/DNA complex; 2.00A {Homo sapiens} SCOP: a.38.1.1
Probab=98.38 E-value=4.5e-07 Score=56.46 Aligned_cols=37 Identities=19% Similarity=0.339 Sum_probs=33.8
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHhhCCCCC-CCCCCcc
Q psy6235 38 REIANSNERRRMQSINAGFQSLRTLLPHHE-GEKLSKT 74 (76)
Q Consensus 38 R~~aN~RER~Rm~~lN~AF~~LR~~lP~~p-~~KLSKi 74 (76)
|...|..||.|...||.+|+.|+.+||..+ ..|+||+
T Consensus 2 R~~HN~~ER~RR~~lk~~f~~Lr~~vP~~~~~~k~sk~ 39 (80)
T 1nlw_A 2 RSTHNEMEKNRRAHLRLSLEKLKGLVPLGPDSSRHTTL 39 (80)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSSCCCSSSCCCTTH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence 678899999999999999999999999986 4699986
No 10
>1an4_A Protein (upstream stimulatory factor); protein-DNA complex, double helix, overhanging base, transcription/DNA complex; HET: DNA; 2.90A {Homo sapiens} SCOP: a.38.1.1
Probab=98.17 E-value=1.4e-06 Score=51.49 Aligned_cols=39 Identities=33% Similarity=0.343 Sum_probs=33.2
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhhCCCCCC----CCCCccc
Q psy6235 37 RREIANSNERRRMQSINAGFQSLRTLLPHHEG----EKLSKTI 75 (76)
Q Consensus 37 rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~p~----~KLSKi~ 75 (76)
+|...|..||.|...||.+|++|+.+||.... .|+||+.
T Consensus 5 rr~~H~~~Er~RR~~in~~~~~L~~lvP~~~~~~~~~k~~Ka~ 47 (65)
T 1an4_A 5 RRAQHNEVERRRRDKINNWIVQLSKIIPDSSMESTKSGQSKGG 47 (65)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHHHSCCCCCCSSTTCCCTTT
T ss_pred HHHhhchHHHHHHHHHHHHHHHHHHHCcCcccccccCCCCHHH
Confidence 56678999999999999999999999998753 2788864
No 11
>1am9_A Srebp-1A, protein (sterol regulatory element binding protein 1A); basic-helix-loop- helix-leucine zipper, transcription factor; HET: DNA; 2.30A {Homo sapiens} SCOP: a.38.1.1 PDB: 1ukl_C
Probab=97.97 E-value=4.8e-06 Score=51.59 Aligned_cols=40 Identities=30% Similarity=0.363 Sum_probs=34.3
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCcc
Q psy6235 34 KRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSKT 74 (76)
Q Consensus 34 ~~~rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~p~~KLSKi 74 (76)
...+|...|..||.|...||.+|..|+.+||.. +.|++|+
T Consensus 3 ~~~rr~~H~~~ErrRR~~in~~f~~L~~lvP~~-~~k~~Ka 42 (82)
T 1am9_A 3 RGEKRTAHNAIEKRYRSSINDKIIELKDLVVGT-EAKLNKS 42 (82)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS-SCCCCHH
T ss_pred hhHHHHhhhhHHHHHHHHHHHHHHHHHHhccCC-CCCCCHH
Confidence 356788999999999999999999999999973 4577775
No 12
>4h10_B Circadian locomoter output cycles protein kaput; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens}
Probab=97.43 E-value=0.00013 Score=44.81 Aligned_cols=40 Identities=25% Similarity=0.477 Sum_probs=33.8
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCcc
Q psy6235 34 KRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSKT 74 (76)
Q Consensus 34 ~~~rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~p~~KLSKi 74 (76)
...+|..-|.-||+|-..||..|.+|+.+||. +..|++|.
T Consensus 5 ~~~kR~~Hn~iErrRRd~IN~~i~eL~~LvP~-~~~K~dK~ 44 (71)
T 4h10_B 5 DKAKRVSRNKSEKKRRDQFNVLIKELGSMLPG-NARKMDKS 44 (71)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSS-CCSCCCHH
T ss_pred hhHHhhhhhHHHhhHHHHHHHHHHHHHHhCCC-CCCCCcHH
Confidence 45688889999999999999999999999994 23477764
No 13
>4h10_A ARYL hydrocarbon receptor nuclear translocator-LI 1; BHLH, circadian transcription, transcription-DNA complex; 2.40A {Homo sapiens}
Probab=97.36 E-value=0.00012 Score=44.84 Aligned_cols=42 Identities=29% Similarity=0.374 Sum_probs=35.2
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHhhCCCC--CCCCCCcc
Q psy6235 33 EKRIRREIANSNERRRMQSINAGFQSLRTLLPHH--EGEKLSKT 74 (76)
Q Consensus 33 ~~~~rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~--p~~KLSKi 74 (76)
....+|...|.-||+|-..||..|++|+.+||.. +..||+|+
T Consensus 5 k~~~rR~~H~~~ERrRR~rIN~~l~eL~~LvP~~~~~~~KldKa 48 (73)
T 4h10_A 5 RIKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 48 (73)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHTCSSCCCHH
T ss_pred HHHHHHHhcchHHHHHHHHHHHHHHHHHHHccccccccccccHH
Confidence 3456778889999999999999999999999974 24588875
No 14
>1a0a_A BHLH, protein (phosphate system positive regulatory protein PHO4); transcription factor, basic helix loop helix; HET: DNA; 2.80A {Saccharomyces cerevisiae} SCOP: a.38.1.1
Probab=97.10 E-value=0.00046 Score=40.96 Aligned_cols=38 Identities=24% Similarity=0.365 Sum_probs=30.9
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHhhCCCCC-----CCCCCcc
Q psy6235 37 RREIANSNERRRMQSINAGFQSLRTLLPHHE-----GEKLSKT 74 (76)
Q Consensus 37 rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~p-----~~KLSKi 74 (76)
+|..-+.=||.|...||.+|++|+.+||... ..|+||.
T Consensus 2 kr~~H~~aEr~RR~rIn~~~~~L~~LlP~~~~~~~~~~k~sKa 44 (63)
T 1a0a_A 2 KRESHKHAEQARRNRLAVALHELASLIPAEWKQQNVSAAPSKA 44 (63)
T ss_dssp CTTGGGGGTHHHHHHHHHHHHHHHHTSCHHHHTSSCCCCSCTT
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHCCCcccccccCCcccHH
Confidence 3455677799999999999999999999742 3588886
No 15
>4ati_A MITF, microphthalmia-associated transcription factor; DNA-binding protein-DNA complex, melanoma; 2.60A {Mus musculus} PDB: 4atk_A
Probab=97.07 E-value=0.00037 Score=45.73 Aligned_cols=41 Identities=32% Similarity=0.450 Sum_probs=29.5
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhhCCCCC--CCCCCcc
Q psy6235 34 KRIRREIANSNERRRMQSINAGFQSLRTLLPHHE--GEKLSKT 74 (76)
Q Consensus 34 ~~~rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~p--~~KLSKi 74 (76)
...+|...|.-||.|-..||..|..|+.+||... +.|++|.
T Consensus 24 ~~~kr~~Hn~~ERrRR~~In~~~~~L~~lvP~~~~~~~k~~Ka 66 (118)
T 4ati_A 24 ERQKKDNHNLIERRRRFNINDRIKELGTLIPKSNDPDMRWNKG 66 (118)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHSCCC----CCCCHH
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCccccCCHH
Confidence 4457778899999999999999999999999864 3488875
No 16
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=96.40 E-value=0.0017 Score=47.37 Aligned_cols=41 Identities=24% Similarity=0.475 Sum_probs=26.2
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCcc
Q psy6235 33 EKRIRREIANSNERRRMQSINAGFQSLRTLLPHHEGEKLSKT 74 (76)
Q Consensus 33 ~~~~rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~p~~KLSKi 74 (76)
....+|...|.-||+|-..+|..|.+|+.+|| ....||.|+
T Consensus 8 ~~~~~~~~~~~~e~~rr~~~n~~~~~l~~~~p-~~~~~~dk~ 48 (361)
T 4f3l_A 8 KDKAKRVSRNKSEKKRRDQFNVLIKELGSMLP-GNARKMDKS 48 (361)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHTCC-SSSCCCCHH
T ss_pred ccchhhhhhhHHHHHHHHHHHHHHHHHHHhCC-CCCCCcCHH
Confidence 35667888899999999999999999999999 334588775
No 17
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=93.18 E-value=0.03 Score=41.36 Aligned_cols=41 Identities=29% Similarity=0.404 Sum_probs=33.4
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHhhCCCCC--CCCCCcc
Q psy6235 34 KRIRREIANSNERRRMQSINAGFQSLRTLLPHHE--GEKLSKT 74 (76)
Q Consensus 34 ~~~rR~~aN~RER~Rm~~lN~AF~~LR~~lP~~p--~~KLSKi 74 (76)
.+.+|...|.-||+|-..+|..|.+|+.+||... ..||.|+
T Consensus 10 ~~~~~~~~~~~ek~rR~~~n~~~~~L~~l~p~~~~~~~k~dk~ 52 (387)
T 4f3l_B 10 IKNAREAHSQIEKRRRDKMNSFIDELASLVPTCNAMSRKLDKL 52 (387)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCSSCCCHH
T ss_pred hhhhcccccchhhcchHHHHHHHHHHHHhcCCCCccccccCHH
Confidence 4556778889999999999999999999999753 3477765
No 18
>3muj_A Transcription factor COE3; immunoglobulin like fold, helix-loop-helix, structural genom consortium, SGC, DNA binding protein; 1.92A {Homo sapiens} PDB: 3mqi_A
Probab=69.78 E-value=3.2 Score=28.19 Aligned_cols=25 Identities=44% Similarity=0.876 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHhhCCCCCC--CCCCcc
Q psy6235 50 QSINAGFQSLRTLLPHHEG--EKLSKT 74 (76)
Q Consensus 50 ~~lN~AF~~LR~~lP~~p~--~KLSKi 74 (76)
-.|+-+|++|.+.||.+|+ ++|-|.
T Consensus 94 PtId~gfqrl~k~~pr~pgdpe~lpk~ 120 (138)
T 3muj_A 94 PTIDYGFQRLQKVIPRHPGDPERLPKE 120 (138)
T ss_dssp CCHHHHHHHHHHHSCCCTTCCSSCCHH
T ss_pred CccccchhhhccccCCCCCChhhhhHH
Confidence 3689999999999999985 488763
No 19
>4ath_A MITF, microphthalmia-associated transcription factor; DNA binding protein, melanoma; HET: MSE; 1.95A {Mus musculus}
Probab=62.47 E-value=6.7 Score=24.45 Aligned_cols=24 Identities=29% Similarity=0.479 Sum_probs=19.3
Q ss_pred HHHHHHHHHHhhCCCCC--CCCCCcc
Q psy6235 51 SINAGFQSLRTLLPHHE--GEKLSKT 74 (76)
Q Consensus 51 ~lN~AF~~LR~~lP~~p--~~KLSKi 74 (76)
+||..+.+|..+||... .-|++|-
T Consensus 6 nIN~~I~EL~~LiP~~~~~~~k~nKg 31 (83)
T 4ath_A 6 NINDRIKELGTLIPKSNDPDMRWNKG 31 (83)
T ss_dssp HHHHHHHHHHHHSCCCCCTTCCCSHH
T ss_pred hHHHhhhhhhccCCCCCCcccCcchH
Confidence 69999999999999863 3377763
No 20
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=49.72 E-value=12 Score=21.85 Aligned_cols=17 Identities=24% Similarity=0.354 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHHHHhhC
Q psy6235 47 RRMQSINAGFQSLRTLL 63 (76)
Q Consensus 47 ~Rm~~lN~AF~~LR~~l 63 (76)
.+++.||.||+.|...+
T Consensus 50 ~~f~~i~~AYe~L~~~~ 66 (79)
T 1faf_A 50 ALMQELNSLWGTFKTEV 66 (79)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHH
Confidence 47999999999998743
No 21
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=45.38 E-value=15 Score=20.94 Aligned_cols=16 Identities=19% Similarity=-0.010 Sum_probs=13.8
Q ss_pred HHHHHHHHHHHHHHhh
Q psy6235 47 RRMQSINAGFQSLRTL 62 (76)
Q Consensus 47 ~Rm~~lN~AF~~LR~~ 62 (76)
.+++.||.|++.|.+.
T Consensus 52 ~~f~~i~~Aye~L~~~ 67 (71)
T 2guz_A 52 FLATKINEAKDFLEKR 67 (71)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhh
Confidence 3899999999999874
No 22
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=43.90 E-value=24 Score=21.20 Aligned_cols=22 Identities=5% Similarity=0.057 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHhhCCCCC
Q psy6235 46 RRRMQSINAGFQSLRTLLPHHE 67 (76)
Q Consensus 46 R~Rm~~lN~AF~~LR~~lP~~p 67 (76)
-.+++.||.||+.|.+..+-.+
T Consensus 57 ~~~F~~I~~AYevL~~~~~r~~ 78 (88)
T 1iur_A 57 NEVFKHLQNEINRLEKQAFLDQ 78 (88)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSS
T ss_pred HHHHHHHHHHHHHHHhhccccc
Confidence 3589999999999999887644
No 23
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.90 E-value=24 Score=19.93 Aligned_cols=16 Identities=6% Similarity=0.426 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHh
Q psy6235 46 RRRMQSINAGFQSLRT 61 (76)
Q Consensus 46 R~Rm~~lN~AF~~LR~ 61 (76)
..+++.||.||+.|..
T Consensus 47 ~~~f~~i~~Ay~~L~d 62 (79)
T 2dn9_A 47 KEKFSQLAEAYEVLSD 62 (79)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHCC
Confidence 3578999999999975
No 24
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.38 E-value=24 Score=20.63 Aligned_cols=15 Identities=7% Similarity=0.457 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHh
Q psy6235 47 RRMQSINAGFQSLRT 61 (76)
Q Consensus 47 ~Rm~~lN~AF~~LR~ 61 (76)
.+++.||.||+.|..
T Consensus 51 ~~f~~i~~Ay~~L~d 65 (92)
T 2dmx_A 51 KKFKLVSEAYEVLSD 65 (92)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHCC
Confidence 478999999999975
No 25
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.46 E-value=26 Score=20.46 Aligned_cols=16 Identities=13% Similarity=0.461 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHh
Q psy6235 46 RRRMQSINAGFQSLRT 61 (76)
Q Consensus 46 R~Rm~~lN~AF~~LR~ 61 (76)
..+++.||.||+.|..
T Consensus 46 ~~~f~~i~~Ay~~L~d 61 (88)
T 2ctr_A 46 EAKFREIAEAYETLSD 61 (88)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHCC
Confidence 4589999999999975
No 26
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=34.01 E-value=26 Score=20.41 Aligned_cols=16 Identities=19% Similarity=0.397 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHHh
Q psy6235 46 RRRMQSINAGFQSLRT 61 (76)
Q Consensus 46 R~Rm~~lN~AF~~LR~ 61 (76)
..+++.||.||+.|..
T Consensus 56 ~~~f~~i~~Ay~~L~d 71 (88)
T 2cug_A 56 EDRFIQISKAYEILSN 71 (88)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHCC
Confidence 4589999999999975
No 27
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.88 E-value=24 Score=20.08 Aligned_cols=15 Identities=20% Similarity=0.570 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHh
Q psy6235 47 RRMQSINAGFQSLRT 61 (76)
Q Consensus 47 ~Rm~~lN~AF~~LR~ 61 (76)
.+++.||.||+.|..
T Consensus 51 ~~f~~i~~Ay~~L~d 65 (82)
T 2ej7_A 51 RRFKQVAEAYEVLSD 65 (82)
T ss_dssp HHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHCC
Confidence 479999999999965
No 28
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.82 E-value=28 Score=19.67 Aligned_cols=16 Identities=13% Similarity=0.366 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHHHHHh
Q psy6235 46 RRRMQSINAGFQSLRT 61 (76)
Q Consensus 46 R~Rm~~lN~AF~~LR~ 61 (76)
..+++.||.||+.|..
T Consensus 46 ~~~f~~i~~Ay~~L~d 61 (78)
T 2ctp_A 46 TEAFKAIGTAYAVLSN 61 (78)
T ss_dssp HHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHCC
Confidence 3578999999999864
No 29
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.76 E-value=41 Score=19.80 Aligned_cols=17 Identities=6% Similarity=0.081 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHhhC
Q psy6235 47 RRMQSINAGFQSLRTLL 63 (76)
Q Consensus 47 ~Rm~~lN~AF~~LR~~l 63 (76)
.+++.||.||+.|.+-.
T Consensus 67 ~~f~~i~~Ay~~L~d~~ 83 (90)
T 2ys8_A 67 DAFKAVVNARTALLKNI 83 (90)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCcc
Confidence 46999999999998754
No 30
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=27.62 E-value=31 Score=20.33 Aligned_cols=15 Identities=20% Similarity=0.512 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHh
Q psy6235 47 RRMQSINAGFQSLRT 61 (76)
Q Consensus 47 ~Rm~~lN~AF~~LR~ 61 (76)
.+++.||.||+.|.+
T Consensus 46 ~~f~~i~~Ay~~L~d 60 (92)
T 2o37_A 46 EKFKEISEAFEILND 60 (92)
T ss_dssp HHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHCC
Confidence 389999999999864
No 31
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=27.42 E-value=32 Score=20.02 Aligned_cols=15 Identities=13% Similarity=0.388 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHh
Q psy6235 47 RRMQSINAGFQSLRT 61 (76)
Q Consensus 47 ~Rm~~lN~AF~~LR~ 61 (76)
.+++.||.||+.|..
T Consensus 63 ~~f~~i~~Ay~~L~d 77 (94)
T 1wjz_A 63 QKFIEIDQAWKILGN 77 (94)
T ss_dssp HHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHCC
Confidence 589999999999964
No 32
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=26.24 E-value=28 Score=19.60 Aligned_cols=16 Identities=13% Similarity=0.414 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHHHHHh
Q psy6235 46 RRRMQSINAGFQSLRT 61 (76)
Q Consensus 46 R~Rm~~lN~AF~~LR~ 61 (76)
..+++.||.||+.|..
T Consensus 42 ~~~f~~i~~Ay~~L~d 57 (77)
T 1hdj_A 42 EEKFKEIAEAYDVLSD 57 (77)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHCC
Confidence 3579999999998854
No 33
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=25.92 E-value=39 Score=18.85 Aligned_cols=15 Identities=13% Similarity=0.445 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHh
Q psy6235 47 RRMQSINAGFQSLRT 61 (76)
Q Consensus 47 ~Rm~~lN~AF~~LR~ 61 (76)
.+++.||.||+.|..
T Consensus 46 ~~f~~i~~Ay~~L~d 60 (73)
T 2och_A 46 EQFKQISQAYEVLSD 60 (73)
T ss_dssp HHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHCC
Confidence 478999999999864
No 34
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=25.68 E-value=44 Score=20.16 Aligned_cols=15 Identities=7% Similarity=0.481 Sum_probs=12.9
Q ss_pred HHHHHHHHHHHHHHh
Q psy6235 47 RRMQSINAGFQSLRT 61 (76)
Q Consensus 47 ~Rm~~lN~AF~~LR~ 61 (76)
.+++.||.||+.|.+
T Consensus 44 ~~f~~I~~AY~vL~d 58 (99)
T 2lgw_A 44 KKFKEVAEAYEVLSD 58 (99)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHCC
Confidence 478999999999864
No 35
>1gk7_A Vimentin; intermediate filament, heptad repeat; 1.4A {Homo sapiens} SCOP: h.1.20.1 PDB: 3g1e_A
Probab=25.05 E-value=56 Score=17.27 Aligned_cols=16 Identities=38% Similarity=0.613 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHH
Q psy6235 43 SNERRRMQSINAGFQS 58 (76)
Q Consensus 43 ~RER~Rm~~lN~AF~~ 58 (76)
..|+.=|+.||+-|..
T Consensus 2 ~~EKe~mq~LNdrlAs 17 (39)
T 1gk7_A 2 SNEKVELQELNDRFAN 17 (39)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHH
Confidence 4677889999987754
No 36
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=24.92 E-value=46 Score=20.05 Aligned_cols=16 Identities=19% Similarity=0.571 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHHHHh
Q psy6235 46 RRRMQSINAGFQSLRT 61 (76)
Q Consensus 46 R~Rm~~lN~AF~~LR~ 61 (76)
..+++.||.||+.|..
T Consensus 59 ~~~f~~i~~AY~~L~d 74 (109)
T 2qsa_A 59 EERFRVIATAYETLKD 74 (109)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHCC
Confidence 3589999999999975
No 37
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=23.33 E-value=36 Score=21.34 Aligned_cols=16 Identities=13% Similarity=0.355 Sum_probs=13.7
Q ss_pred HHHHHHHHHHHHHHhh
Q psy6235 47 RRMQSINAGFQSLRTL 62 (76)
Q Consensus 47 ~Rm~~lN~AF~~LR~~ 62 (76)
.+++.||.||+.|..-
T Consensus 47 e~f~~I~~AYevL~d~ 62 (114)
T 1gh6_A 47 EKMKKMNTLYKKMEDG 62 (114)
T ss_dssp TTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCH
Confidence 4899999999999754
No 38
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.93 E-value=35 Score=20.33 Aligned_cols=16 Identities=19% Similarity=0.380 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHh
Q psy6235 46 RRRMQSINAGFQSLRT 61 (76)
Q Consensus 46 R~Rm~~lN~AF~~LR~ 61 (76)
..+++.||.||+.|..
T Consensus 57 ~~~f~~i~~Ay~~L~d 72 (99)
T 2yua_A 57 AERFTRISQAYVVLGS 72 (99)
T ss_dssp HHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHCC
Confidence 4579999999998864
No 39
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=22.57 E-value=45 Score=20.29 Aligned_cols=16 Identities=19% Similarity=0.310 Sum_probs=13.5
Q ss_pred HHHHHHHHHHHHHHHh
Q psy6235 46 RRRMQSINAGFQSLRT 61 (76)
Q Consensus 46 R~Rm~~lN~AF~~LR~ 61 (76)
..+++.||.||+.|.+
T Consensus 57 ~~~f~~i~~Ay~vL~d 72 (109)
T 2ctw_A 57 ADKFKEINNAHAILTD 72 (109)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHcC
Confidence 4589999999999864
No 40
>1d8b_A SGS1 RECQ helicase; five helices, three-helical bundle flanked by two helices, DNA binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.60.8.1
Probab=21.81 E-value=48 Score=20.47 Aligned_cols=12 Identities=25% Similarity=0.595 Sum_probs=10.0
Q ss_pred HHHHHHHHHHhh
Q psy6235 51 SINAGFQSLRTL 62 (76)
Q Consensus 51 ~lN~AF~~LR~~ 62 (76)
.|+.||++||+.
T Consensus 4 ~l~~ay~~Lr~~ 15 (81)
T 1d8b_A 4 NLRMTYERLREL 15 (81)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 688999999874
No 41
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.56 E-value=58 Score=19.82 Aligned_cols=16 Identities=13% Similarity=0.150 Sum_probs=13.4
Q ss_pred HHHHHHHHHHHHHHHh
Q psy6235 46 RRRMQSINAGFQSLRT 61 (76)
Q Consensus 46 R~Rm~~lN~AF~~LR~ 61 (76)
..+++.||.||+.|..
T Consensus 60 ~~~f~~i~~Ay~vL~d 75 (112)
T 2ctq_A 60 VETFQKLQKAKEILTN 75 (112)
T ss_dssp HHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHCC
Confidence 4588999999999964
No 42
>2a9s_A Competence/damage-inducible protein CINA; APC5759, ATC1417, MCSG, protei structure initiative; 1.75A {Agrobacterium tumefaciens} SCOP: c.51.5.1
Probab=21.44 E-value=58 Score=21.95 Aligned_cols=23 Identities=13% Similarity=0.209 Sum_probs=20.3
Q ss_pred HhHHHHHHHHHHHHHHHHHHhhC
Q psy6235 41 ANSNERRRMQSINAGFQSLRTLL 63 (76)
Q Consensus 41 aN~RER~Rm~~lN~AF~~LR~~l 63 (76)
...|+..|.+.++.|++.|++.|
T Consensus 144 ~g~R~~ir~~a~~~AL~~L~~~L 166 (171)
T 2a9s_A 144 DIGRTEIRLATVRTALEMLIALN 166 (171)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHH
Confidence 35799999999999999999876
Done!