Query psy6236
Match_columns 358
No_of_seqs 170 out of 503
Neff 6.8
Searched_HMMs 29240
Date Fri Aug 16 21:15:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6236.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6236hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3h6z_A Polycomb protein SFMBT; 100.0 1.3E-88 4.6E-93 680.8 25.4 332 1-355 41-413 (447)
2 3f70_A Lethal(3)malignant brai 100.0 2.9E-87 1E-91 672.5 28.3 328 1-355 45-403 (456)
3 3feo_A MBT domain-containing p 100.0 1E-84 3.5E-89 652.1 26.1 319 1-355 47-399 (437)
4 3ut1_A Lethal(3)malignant brai 100.0 2.3E-79 8E-84 592.4 23.9 236 1-355 41-284 (324)
5 1oz2_A Lethal(3)malignant brai 100.0 7.8E-78 2.7E-82 584.0 25.3 236 1-355 46-289 (331)
6 3feo_A MBT domain-containing p 100.0 2.2E-62 7.4E-67 490.7 18.8 252 1-285 160-433 (437)
7 3h6z_A Polycomb protein SFMBT; 100.0 6.3E-61 2.2E-65 480.5 19.9 260 1-285 161-447 (447)
8 3f70_A Lethal(3)malignant brai 100.0 5.5E-59 1.9E-63 467.5 20.0 254 1-286 158-438 (456)
9 2biv_A SCML2 protein, sex COMB 100.0 3.2E-55 1.1E-59 408.0 18.2 193 44-355 6-208 (243)
10 2biv_A SCML2 protein, sex COMB 100.0 2E-53 6.7E-58 396.0 19.1 167 1-285 67-242 (243)
11 2r58_A Polycomb protein SCM; M 100.0 7.2E-53 2.4E-57 395.9 19.3 169 1-287 39-216 (265)
12 3ut1_A Lethal(3)malignant brai 100.0 7.2E-53 2.5E-57 407.3 17.2 165 1-287 148-320 (324)
13 1oz2_A Lethal(3)malignant brai 100.0 7E-52 2.4E-56 402.0 18.7 165 1-287 153-325 (331)
14 2r58_A Polycomb protein SCM; M 100.0 3.2E-48 1.1E-52 364.4 19.1 162 75-355 14-180 (265)
15 1wjr_A KIAA1617 protein; MBT d 100.0 1.4E-32 4.6E-37 231.6 7.9 111 102-319 8-126 (127)
16 1wjq_A KIAA1798 protein; MBT d 99.9 3.4E-28 1.2E-32 198.0 9.9 78 103-289 11-88 (107)
17 1wjr_A KIAA1617 protein; MBT d 99.9 1.4E-27 4.9E-32 201.0 6.3 89 1-89 16-119 (127)
18 1wjq_A KIAA1798 protein; MBT d 99.9 1.1E-26 3.9E-31 189.0 7.6 70 1-70 18-89 (107)
19 2eqm_A PHD finger protein 20-l 99.7 3.5E-18 1.2E-22 134.9 8.9 38 240-282 50-87 (88)
20 3sd4_A PHD finger protein 20; 99.7 3.8E-17 1.3E-21 123.4 8.6 32 98-131 5-36 (69)
21 2eqm_A PHD finger protein 20-l 99.7 4.1E-17 1.4E-21 128.7 5.9 62 1-62 24-87 (88)
22 3sd4_A PHD finger protein 20; 99.5 7.3E-15 2.5E-19 110.8 6.0 48 1-50 17-68 (69)
23 3h8z_A FragIle X mental retard 96.8 0.011 3.9E-07 49.1 10.7 94 1-144 6-102 (128)
24 3h8z_A FragIle X mental retard 95.9 0.063 2.2E-06 44.6 10.2 39 317-355 59-100 (128)
25 2w0t_A Lethal(3)malignant brai 85.7 0.2 7E-06 33.4 0.6 31 202-232 2-32 (43)
26 2f5k_A MORF-related gene 15 is 82.6 2.9 9.8E-05 33.1 6.2 39 102-143 19-61 (102)
27 2m0o_A PHD finger protein 1; t 73.8 6 0.00021 29.5 5.2 38 5-43 33-72 (79)
28 2xk0_A Polycomb protein PCL; t 71.4 6.3 0.00022 28.8 4.7 34 9-43 26-59 (69)
29 2eko_A Histone acetyltransfera 60.7 10 0.00035 29.0 4.3 31 103-133 7-39 (87)
30 2lcc_A AT-rich interactive dom 56.0 13 0.00044 27.6 4.1 41 103-143 3-48 (76)
31 2k8i_A SLYD, peptidyl-prolyl C 51.8 20 0.00067 30.7 5.2 34 104-140 88-121 (171)
32 2e5q_A PHD finger protein 19; 51.7 17 0.00059 25.9 3.9 34 8-42 17-52 (63)
33 2e5p_A Protein PHF1, PHD finge 51.3 29 0.001 25.1 5.1 35 8-43 19-55 (68)
34 2kfw_A FKBP-type peptidyl-prol 51.0 14 0.00047 32.5 4.1 33 105-140 89-121 (196)
35 1wgs_A MYST histone acetyltran 49.6 30 0.001 28.4 5.8 28 103-132 10-37 (133)
36 3oa6_A MALE-specific lethal 3 48.9 19 0.00066 28.7 4.3 32 101-132 15-48 (110)
37 4hcz_A PHD finger protein 1; p 48.6 51 0.0017 23.2 5.8 35 8-43 13-49 (58)
38 3cgm_A SLYD, peptidyl-prolyl C 48.0 25 0.00087 29.5 5.2 35 104-140 83-117 (158)
39 4dt4_A FKBP-type 16 kDa peptid 47.5 32 0.0011 29.3 5.9 34 105-140 112-145 (169)
40 2equ_A PHD finger protein 20-l 44.9 65 0.0022 23.6 6.4 39 103-143 7-46 (74)
41 2ro0_A Histone acetyltransfera 44.7 47 0.0016 25.5 5.8 45 103-155 21-65 (92)
42 3m9q_A Protein MALE-specific l 44.0 76 0.0026 24.8 7.0 42 102-143 16-68 (101)
43 2kfw_A FKBP-type peptidyl-prol 40.0 15 0.00053 32.1 2.7 63 278-354 60-122 (196)
44 2eko_A Histone acetyltransfera 38.2 52 0.0018 25.0 5.0 53 2-54 15-75 (87)
45 2lrq_A Protein MRG15, NUA4 com 43.4 7.1 0.00024 29.7 0.0 45 103-155 10-54 (85)
46 2eqj_A Metal-response element- 36.8 48 0.0016 23.9 4.4 32 10-42 25-58 (66)
47 3p8d_A Medulloblastoma antigen 36.8 93 0.0032 22.4 6.0 37 104-142 5-42 (67)
48 1ix5_A FKBP; ppiase, isomerase 34.0 37 0.0013 28.1 4.0 42 305-355 92-133 (151)
49 2equ_A PHD finger protein 20-l 33.6 79 0.0027 23.1 5.3 38 316-355 7-45 (74)
50 3qii_A PHD finger protein 20; 33.6 76 0.0026 24.1 5.2 38 316-355 19-57 (85)
51 3qii_A PHD finger protein 20; 32.9 1E+02 0.0035 23.3 5.9 37 103-141 19-56 (85)
52 4dt4_A FKBP-type 16 kDa peptid 32.9 69 0.0024 27.2 5.6 45 305-354 102-146 (169)
53 2kr7_A FKBP-type peptidyl-prol 32.3 62 0.0021 26.7 5.2 45 305-355 84-128 (151)
54 2l1t_A Uncharacterized protein 31.5 44 0.0015 26.6 3.8 37 317-353 11-49 (109)
55 3p8d_A Medulloblastoma antigen 31.1 1.1E+02 0.0038 22.0 5.6 36 318-355 6-42 (67)
56 2k8i_A SLYD, peptidyl-prolyl C 30.7 41 0.0014 28.6 3.8 44 305-354 79-122 (171)
57 2f5k_A MORF-related gene 15 is 29.7 1E+02 0.0034 24.1 5.6 36 316-354 20-59 (102)
58 3cgm_A SLYD, peptidyl-prolyl C 26.4 78 0.0027 26.4 4.8 46 305-355 74-119 (158)
59 2rnz_A Histone acetyltransfera 25.0 1E+02 0.0036 23.7 4.8 45 103-155 23-67 (94)
60 2kr7_A FKBP-type peptidyl-prol 24.6 1E+02 0.0034 25.4 5.1 34 105-140 93-126 (151)
61 3m9p_A MALE-specific lethal 3 24.0 1.9E+02 0.0066 22.8 6.3 42 102-143 16-68 (110)
62 1ix5_A FKBP; ppiase, isomerase 23.9 58 0.002 26.9 3.5 29 105-140 103-131 (151)
63 3pr9_A FKBP-type peptidyl-prol 22.4 79 0.0027 26.4 4.0 41 305-354 91-131 (157)
64 3m9q_A Protein MALE-specific l 22.3 75 0.0026 24.8 3.6 36 8-43 33-79 (101)
65 3dlm_A Histone-lysine N-methyl 21.9 1.2E+02 0.0042 26.8 5.2 44 102-148 155-203 (213)
66 1wgs_A MYST histone acetyltran 20.6 1.7E+02 0.0058 23.8 5.6 37 12-48 26-70 (133)
67 2ro0_A Histone acetyltransfera 20.2 2.8E+02 0.0097 21.0 6.4 36 316-354 21-60 (92)
No 1
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=100.00 E-value=1.3e-88 Score=680.77 Aligned_cols=332 Identities=25% Similarity=0.386 Sum_probs=283.4
Q ss_pred CEEEEecC-----------CCCCCEEEEEEEEEeCCeEEEEEeC---CCCCEEEeCCCCCeeccchhhhcCccccCCCCC
Q psy6236 1 MNLEVVDK-----------KRISQVKVATIEKIVGKRLQVHYYD---DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLY 66 (358)
Q Consensus 1 MkLE~id~-----------~~~~~~~vAtV~~v~G~rl~l~~~~---~~~dfW~~~~S~~IhPVGWc~~ng~~L~pP~~y 66 (358)
||||++|+ .++..+|||||+++||+||||||+| +++|||||++|++|||||||++||+.|+||.++
T Consensus 41 MklEv~~~~~~~~~~~~~~~~p~~~WvAtV~~~~G~rLlLry~G~~~d~~DFW~~~~S~~ihPvGWc~~~g~~L~PP~~i 120 (447)
T 3h6z_A 41 MKVEVENTDCDSIEVIQPGQTPTSFWVATILEIKGYKALMSYEGFDTDSHDFWVNLCNAEVHSVGWCATRGKPLIPPRTI 120 (447)
T ss_dssp CEEEEC----------------CCBEEEEEEEEETTEEEEEETTCSSGGGCEEEETTTSSCBCTTHHHHHTCCBCCCGGG
T ss_pred CEEEEecCCcccccccccccCCCcEEEEEEhhhcccEEEEEEccCCCCCCCccccCCCCceecCchHhhcCceecCCccc
Confidence 99999873 4788999999999999999999986 458999999999999999999999999999999
Q ss_pred Cccccccc-------cCccchhhhcCCCCcCCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEe
Q psy6236 67 TDRCAKGI-------RDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEE 139 (358)
Q Consensus 67 ~~~~~~~~-------~~~~~ap~~lF~~~~~~~~~~~~p~~~~~~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~ 139 (358)
.++.++|. .++..+|.++|++... ...+.|++||||||+|++|+.+||||||++|+|+|++++
T Consensus 121 ~~~~~dW~~~L~~~l~ga~~~P~~lf~~~~~----------~~~~~F~~GmkLE~vD~~~~~~i~vAtV~~v~g~rl~l~ 190 (447)
T 3h6z_A 121 EHKYKDWKDFLVGRLSGARTLPSNFYNKIND----------SLQSRFRLGLNLECVDKDRISQVRLATVTKIVGDRLFLR 190 (447)
T ss_dssp GGGCSCCHHHHHHHHTTCCCSCTTHHHHHHH----------HTSCSSCTTCEEEEECTTCTTEEEEEEEEEEETTEEEEE
T ss_pred cccccCHHHHHHHHhcCCcCCCHHHhhhccc----------ccccccCCCCEEEEEcCCCCccEEEEEEEEEECCcEEEE
Confidence 88877773 4667788888865321 135789999999999999999999999999999999998
Q ss_pred e-----cceeeccCC----CCccccCCCCcCCCccCCCCCCCccccCCCCCCcCccccccccCCCCCccccccCCc----
Q psy6236 140 L-----DEGMYYEDP----TGMSKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKDGM---- 206 (358)
Q Consensus 140 ~-----d~w~~~~sp----~gwa~~~~~~~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~---- 206 (358)
+ |.|+++.|| +|||+++|+.|+||.. +... ....|+.++... ...-+..+|++..
T Consensus 191 ~~d~~~dfwc~~~Sp~I~PVGW~~~~g~~L~pP~~--------y~~~--~~~~~~~ll~~~--~~~ap~~LF~~~~~~~~ 258 (447)
T 3h6z_A 191 YFDSDDGFWCHEDSPIIHPVGWATTVGHNLAAPQD--------YLER--MLAGREAMIEVH--EDDATIELFKMNFTFDE 258 (447)
T ss_dssp ETTCSCEEEEETTCTTEECTTHHHHHTCEEECCHH--------HHHH--HHTTTTTCCCCC--TTBCCGGGSCCSSCTHH
T ss_pred EECCCCCEEEeCCCCCccccchHHhcCccccCChh--------hhcc--chhHHHHHHhhc--ccCCCHHHccCcccccc
Confidence 8 479999996 8999999999999932 2211 111233333211 1112333677653
Q ss_pred ---cccccCceecccccccccCCc----eeeeeEeecCceEEEEEcCCCCCCCCCcceEEEecCCCCcccchhhhhcCCC
Q psy6236 207 ---AVCEKCGAMGVKHAFYTRERR----FCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGIN 279 (358)
Q Consensus 207 ---~~~~~~~~~Gmk~~~~~~~~~----~atv~~v~~~~~~~v~~D~~~~~~~~~~d~~~~h~~Sp~I~PvGwc~~~g~~ 279 (358)
....|.|++|||+|++|+.+. +|||++|++++||+|+|||++++.+ ..|+||+|++|++|||||||++||++
T Consensus 259 ~~~~~~~~~F~~GMKLEavDp~~~~~icvATV~~V~~~~~~~v~~Dg~~~~~~-~~d~f~~~~~S~~I~PvGwce~ng~~ 337 (447)
T 3h6z_A 259 YYSDGKTNSFVEGMKLEAVDPLNLSSICPATVMAVLKFGYMMIRIDSYQPDAS-GSDWFCYHEKSPCIFPAGFCSVNNIS 337 (447)
T ss_dssp HHTSCCCCCCCTTCEEEEEETTEEEEEEEEEEEEECSTTEEEEEETTSCTTCT-TTTCEEEETTCTTEECTTHHHHTTCC
T ss_pred ccccccccccccccEEEeeccCCCCcEEEEEEEEeccCCEEEEEECCCCcccC-CCccEEEeCCCCCcCccchHHhcCcc
Confidence 467899999999999999997 6999999999999999999976433 57889899999999999999999999
Q ss_pred CCCCCCCcccccCHhHHHhhcCCCCCCccccCCCCCCCCCCCCCeeeeecCCCCCCcceeEEEeEecceEEEEeCC
Q psy6236 280 LTPPKGYTHATFSWEQYCRDTNSIPAPPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQNP 355 (358)
Q Consensus 280 L~pP~gy~~~~F~W~~YL~~~~a~~aP~~~F~~~~~~~~F~~gmkLEavd~~~p~~icvAtV~~v~g~~~~i~~~~ 355 (358)
|+||+||..+.|+|++||+++++++||.+||++..+.++|++||||||||++||.+||||||++|.|++|+||||-
T Consensus 338 L~pP~gy~~~~f~W~~yl~~~~a~~aP~~lF~~~~~~~~F~~gmkLEAvD~~np~~icvATV~~v~~~~~~i~fDg 413 (447)
T 3h6z_A 338 VTPPNGYDSRTFTWEGYLSDTGAVAAGQHLFHDIIPDHGFEVGMSLECADLMDPRLVCVATVARVVGRLLKVHFDG 413 (447)
T ss_dssp CCCCTTCCTTTCCHHHHHHHHTCCBCCGGGSCCCCCCCCCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEECTT
T ss_pred CCCCCCccccCCcHHHHHHhhCCCcCcHHHcCCCCCCCccccCCEEEeecCCCCCcEEEEEEeEecCCEEEEEeCC
Confidence 9999999999999999999999999999999998788999999999999999999999999999999999999995
No 2
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A
Probab=100.00 E-value=2.9e-87 Score=672.52 Aligned_cols=328 Identities=25% Similarity=0.351 Sum_probs=266.7
Q ss_pred CEEEEecCCCC---CCEEEEEEEEEeCCeEEEEEeC----CCCCEEEeCCCCCeeccchhhhcCccccCCCCCCcccccc
Q psy6236 1 MNLEVVDKKRI---SQVKVATIEKIVGKRLQVHYYD----DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKG 73 (358)
Q Consensus 1 MkLE~id~~~~---~~~~vAtV~~v~G~rl~l~~~~----~~~dfW~~~~S~~IhPVGWc~~ng~~L~pP~~y~~~~~~~ 73 (358)
||||++|+.+. ..+|||||+++||+||||||+| +++||||+++|++|||||||+++|+.|+||.+|.++.++|
T Consensus 45 mklEv~d~~~~~~~~~~WvAtV~~~~G~rL~Lry~G~~~d~~~DFW~~~~s~~ihPvGWc~~~g~~L~PP~~i~~~~~~W 124 (456)
T 3f70_A 45 MKVEVLNSDAVLPSRVYWIASVIQTAGYRVLLRYEGFENDASHDFWCNLGTVDVHPIGWCAINSKILVPPRTIHAKFTDW 124 (456)
T ss_dssp CEEEEECCSCCC--CCEEEEEEEEEETTEEEEEETTCTTCCTTCEEEETTSTTEECTTHHHHTTCCBCCCTTTGGGCSCH
T ss_pred CEEEEecCCCCCCccceEEEEEeeecceeEEEEecccCCCCcCCcceeCCCCceeecccHHhcCcEecCCcccccCcccH
Confidence 99999999874 5799999999999999999986 4789999999999999999999999999999999887777
Q ss_pred c-------cCccchhhhcCCCCcCCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEeec-----
Q psy6236 74 I-------RDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELD----- 141 (358)
Q Consensus 74 ~-------~~~~~ap~~lF~~~~~~~~~~~~p~~~~~~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~d----- 141 (358)
. .++..+|.++|++... ...+.|++||||||+|+.|+..||||||++|+|+|++++++
T Consensus 125 ~~~L~k~l~ga~~~P~~f~~~~~~----------~~~~~F~~GmkLE~vD~~~~~~~~vAtV~~v~g~rl~l~~~~~~~~ 194 (456)
T 3f70_A 125 KGYLMKRLVGSRTLPVDFHIKMVE----------SMKYPFRQGMRLEVVDKSQVSRTRMAVVDTVIGGRLRLLYEDGDSD 194 (456)
T ss_dssp HHHHHHHHTTCCBCCTTHHHHHHH----------HTSCSSCTTCEEEEECTTCTTCEEEEEEEEEETTEEEEEECC----
T ss_pred HHHHHHHhccCccCCHHHhhcccc----------ccCCCCCCCCEEEEECCCCCcceEEEEEEEEECCEEEEEEcCCCCC
Confidence 2 4667788887764321 12578999999999999999999999999999999999997
Q ss_pred --ceeeccCC----CCccccCCCCcCCCccCCCCCCCccccCCCCCCcCccccccccCCCCCccccccCCccccccC--c
Q psy6236 142 --EGMYYEDP----TGMSKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKDGMAVCEKC--G 213 (358)
Q Consensus 142 --~w~~~~sp----~gwa~~~~~~~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~--~ 213 (358)
.|+++.|| +|||..+|+.++||... .+|+..+........-+..+|++...+..|. |
T Consensus 195 ~dfWc~~~Sp~IhPVGW~~~~G~~L~pP~~~---------------~dw~~~~~~~~~~~~ap~~lF~~~~~~~~~~~~F 259 (456)
T 3f70_A 195 DDFWCHMWSPLIHPVGWSRRVGHGIKMSERR---------------SDMAHHPTFRKIYCDAVPYLFKKVRAVYTEGGWF 259 (456)
T ss_dssp CCEEEETTCTTEEETTHHHHHTC-----------------------------------------------CEEECCSCCC
T ss_pred CceEEeCCCCCeeccccHhhcCCccCCCccc---------------hhHHHHHHhhcccccCCHHHhccccccccccccc
Confidence 47888887 89999999999998310 3444433322222222333788888888988 9
Q ss_pred eecccccccccCCc----eeeeeEeecCceEEEEEcCCCCCCCCCcceEEEecCCCCcccchhhhhcCCCCCCCCCCccc
Q psy6236 214 AMGVKHAFYTRERR----FCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKGYTHA 289 (358)
Q Consensus 214 ~~Gmk~~~~~~~~~----~atv~~v~~~~~~~v~~D~~~~~~~~~~d~~~~h~~Sp~I~PvGwc~~~g~~L~pP~gy~~~ 289 (358)
++|||+|++|+.+. +|||++|++++||+|+|||++.+ +..|+||||++|++|||||||++||++|+||+||..+
T Consensus 260 k~GMKLEavDP~~~~~icvATV~~V~~~~~l~l~~Dg~~~~--~~~d~f~~h~~Sp~I~PVGwce~ng~~L~pP~gy~~~ 337 (456)
T 3f70_A 260 EEGMKLEAIDPLNLGNICVATVCKVLLDGYLMICVDGGPST--DGLDWFCYHASSHAIFPATFCQKNDIELTPPKGYEAQ 337 (456)
T ss_dssp CTTCEEEEEETTEEEEEEEEEEEEECSTTEEEEEEC----------CCEEEETTCTTEECTTHHHHTTCCEECCTTCCSS
T ss_pred cCCCEEEEEcCCCCCcEEEEEEEEEecCCEEEEEecCCCcc--CCCCcEEEeCCCCCccccchHHHcCccccCCcccccc
Confidence 99999999999996 69999999999999999999652 2457788899999999999999999999999999999
Q ss_pred ccCHhHHHhhcCCCCCCccccCCCCCCCCCCCCCeeeeecCCCCCCcceeEEEeEecceEEEEeCC
Q psy6236 290 TFSWEQYCRDTNSIPAPPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQNP 355 (358)
Q Consensus 290 ~F~W~~YL~~~~a~~aP~~~F~~~~~~~~F~~gmkLEavd~~~p~~icvAtV~~v~g~~~~i~~~~ 355 (358)
.|+|++||+++++++||.+||++..+.++|++||||||||++||.+||||||++|.|++|+|+||-
T Consensus 338 ~f~W~~yL~~~~~~~aP~~lF~~~~~~~~F~~GMKLEAvD~~np~~icvATV~~v~~~~l~i~fDg 403 (456)
T 3f70_A 338 TFNWENYLEKTKSKAAPSRLFNMDCPNHGFKVGMKLEAVDLMEPRLICVATVKRVVHRLLSIHFDG 403 (456)
T ss_dssp SCCHHHHHHHHTCCBCCGGGSCCCCCCCCCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEEETT
T ss_pred cccHHHHHHhhCCccCCHHHhCcCCCccccccCCEEEeecCCCCCcEEEEEEEEecCCEEEEEeCC
Confidence 999999999999999999999998788999999999999999999999999999999999999995
No 3
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens}
Probab=100.00 E-value=1e-84 Score=652.13 Aligned_cols=319 Identities=25% Similarity=0.363 Sum_probs=276.9
Q ss_pred CEEEEecCCCC---CCEEEEEEEEEeCCeEEEEEeC----CCCCEEEeCCCCCeeccchhhhcCccccCCCCCCcccccc
Q psy6236 1 MNLEVVDKKRI---SQVKVATIEKIVGKRLQVHYYD----DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKG 73 (358)
Q Consensus 1 MkLE~id~~~~---~~~~vAtV~~v~G~rl~l~~~~----~~~dfW~~~~S~~IhPVGWc~~ng~~L~pP~~y~~~~~~~ 73 (358)
||||++|+.+. ..+|||||+++||+||||||+| +++|||||+.|++|||||||+++|+.|+||.++.++..+|
T Consensus 47 mklEv~~~~~~~~~~~yWvA~V~~~~G~rllLry~G~~~d~~~DFW~~~~s~~ihpvGwc~~~~~~l~PP~~i~~~~~~W 126 (437)
T 3feo_A 47 VRVEVPNTDCSLPTKVFWIAGIVKLAGYNALLRYEGFENDSGLDFWCNICGSDIHPVGWCAASGKPLVPPRTIQHKYTNW 126 (437)
T ss_dssp CEEEEECSCC----CCEEEEEEEEEETTEEEEEETTCTTCCTTCEEEETTSTTCEETTHHHHHTCCBCCCGGGTTTCSCH
T ss_pred CEEEEecCCCCCCcCceEEEEEeeecceEEEEEecccCCCCCCCcceeCCCccccccccHhhcCCEecCCcccccccccH
Confidence 99999999884 5799999999999999999975 4689999999999999999999999999999999888777
Q ss_pred c-------cCccchhhhcCCCCcCCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEeec-----
Q psy6236 74 I-------RDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELD----- 141 (358)
Q Consensus 74 ~-------~~~~~ap~~lF~~~~~~~~~~~~p~~~~~~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~d----- 141 (358)
. +++..+|.++|++... ...+.|++|||||++|+.++..+|||||++|+|+|++++++
T Consensus 127 ~~yL~~~ltga~t~P~~~f~~~~~----------~~~~~F~~GmkLEv~d~~~~~~~~vAtV~~v~G~rl~Lry~g~~d~ 196 (437)
T 3feo_A 127 KAFLVKRLTGAKTLPPDFSQKVSE----------SMQYPFKPCMRVEVVDKRHLCRTRVAVVESVIGGRLRLVYEESEDR 196 (437)
T ss_dssp HHHHHHHHTTCCCCCTTHHHHHHH----------HTCCSCCTTEEEEEEETTEEEEEEEEEEEEEETTEEEEEESSCSST
T ss_pred HHHHHHHhhcCccCChhHhhcccc----------ccCCCCCCCCEEEEecCCCCcceEEEEEEEEECCEEEEEEeCCCCC
Confidence 2 4678889999865321 13578999999999999999999999999999999999995
Q ss_pred ---ceeeccCC----CCccccCCCCcCCCccCCCCCCCccccCCCCCCcCccccccccCCCCCccc--cccCCcc--ccc
Q psy6236 142 ---EGMYYEDP----TGMSKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIP--IQKDGMA--VCE 210 (358)
Q Consensus 142 ---~w~~~~sp----~gwa~~~~~~~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~k~~~~--~~~ 210 (358)
+|+++.|| +|||+++|+.++||.. |+.+. ....+| +++.... ...
T Consensus 197 ~~dFW~~~~S~~IhPvGWc~~~g~~L~pP~~--------~~~~~----------------ga~~aP~~lF~~~~~~~~~~ 252 (437)
T 3feo_A 197 TDDFWCHMHSPLIHHIGWSRSIGHRFKRSDI--------TKKQD----------------GHFDTPPHLFAKVKEVDQSG 252 (437)
T ss_dssp TCEEEEETTCTTEECTTHHHHHTCCBC---------------------------------CCEECCGGGSCCCCCCCCSS
T ss_pred CCCeEEeCCCCCccccchHHhcCCcccCchh--------hhhcc----------------cccCCCHHHhccccccCCCc
Confidence 58888886 8999999999999822 11110 001122 4554433 446
Q ss_pred cCceecccccccccCCc----eeeeeEeecCceEEEEEcCCCCCCCCCcceEEEecCCCCcccchhhhhcCCCCCCCCCC
Q psy6236 211 KCGAMGVKHAFYTRERR----FCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKGY 286 (358)
Q Consensus 211 ~~~~~Gmk~~~~~~~~~----~atv~~v~~~~~~~v~~D~~~~~~~~~~d~~~~h~~Sp~I~PvGwc~~~g~~L~pP~gy 286 (358)
|.|++|||+|++|+.+. +|||++|++++||+|+|||++.. +.+||||+|++||+|||||||++||++|+||+||
T Consensus 253 ~~F~~GMKLEavDp~~p~~icvATV~~v~~~g~l~l~~Dg~~~~--~~~d~~~~h~~Sp~I~PVGwc~~ng~~L~pP~g~ 330 (437)
T 3feo_A 253 EWFKEGMKLEAIDPLNLSTICVATIRKVLADGFLMIGIDGSEAA--DGSDWFCYHATSPSIFPVGFCEINMIELTPPRGY 330 (437)
T ss_dssp SCCCTTCEEEEEETTEEEEEEEEEEEEECGGGEEEEEETTCCC---CCTTCEEEETTCTTEECTTHHHHHTCCEECCTTC
T ss_pred cccccCCEEEEEcCCCCceEEEEEEEEEccCCEEEEEeCCCCCC--CCCCeEEeeCCCCCcccchhHhhcCccccCCCCc
Confidence 88999999999999997 69999999999999999999752 2469999999999999999999999999999999
Q ss_pred cccccCHhHHHhhcCCCCCCccccCCCCCCCCCCCCCeeeeecCCCCCCcceeEEEeEecceEEEEeCC
Q psy6236 287 THATFSWEQYCRDTNSIPAPPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQNP 355 (358)
Q Consensus 287 ~~~~F~W~~YL~~~~a~~aP~~~F~~~~~~~~F~~gmkLEavd~~~p~~icvAtV~~v~g~~~~i~~~~ 355 (358)
....|+|++||+++++++||.+||++.++.|+|++||||||||++||.+||||||++|.|++|+|+||-
T Consensus 331 ~~~~f~W~~yL~~t~~~~aP~~lF~~~~~~~~F~~GMKLEAvD~~np~~IcvATV~~v~~~~l~v~fDg 399 (437)
T 3feo_A 331 TKLPFKWFDYLRETGSIAAPVKLFNKDVPNHGFRVGMKLEAVDLMEPRLICVATVTRIIHRLLRIHFDG 399 (437)
T ss_dssp CSSSCCHHHHHHHHTCCBCCGGGGCCCCCCCCCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEEETT
T ss_pred ccCcchHHHHHHhhCCccCCHHHcCCCCccccCccCCEEEeecCCCCCcEEEEEEeEEcCCEEEEEECC
Confidence 988999999999999999999999998888999999999999999999999999999999999999995
No 4
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=100.00 E-value=2.3e-79 Score=592.39 Aligned_cols=236 Identities=33% Similarity=0.512 Sum_probs=215.2
Q ss_pred CEEEEecCCCCCCEEEEEEEEEeCCeEEEEEeC--CCCCEEEeCCCCCeeccchhhhcCccccCCCCCCccccccc----
Q psy6236 1 MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYD--DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGI---- 74 (358)
Q Consensus 1 MkLE~id~~~~~~~~vAtV~~v~G~rl~l~~~~--~~~dfW~~~~S~~IhPVGWc~~ng~~L~pP~~y~~~~~~~~---- 74 (358)
||||++|++|++.||||||++|+|+||+|||+| +++|||||++|++|||||||++||+.|+||+||.++.++|.
T Consensus 41 MKLE~~D~~~~~~~~vAtV~~v~G~rl~l~~dg~~~~~dFW~~~~S~~IhPvGwc~~~g~~L~pP~g~~~~~f~W~~yL~ 120 (324)
T 3ut1_A 41 MKLEGVDPEHQSVYCVLTVAEVCGYRIKLHFDGYSDCYDFWVNADALDIHPVGWCEKTGHKLHPPKGYKEEEFNWQTYLK 120 (324)
T ss_dssp CEEEEEETTEEEEEEEEEEEEEETTEEEEEETTSCGGGCEEEETTCSSEECTTHHHHHTCCEECCTTCCTTTCCHHHHHH
T ss_pred CEEEEecCCCCCcEEEEEEEEEECCEEEEEECCCCCCCCEEEeCCCCCeeccchhHhcCeeccCCCCCcCCCCCHHHHHH
Confidence 999999999999999999999999999999986 67999999999999999999999999999999999888873
Q ss_pred -cCccchhhhcCCCCcCCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEeecceeeccCCCCcc
Q psy6236 75 -RDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGMS 153 (358)
Q Consensus 75 -~~~~~ap~~lF~~~~~~~~~~~~p~~~~~~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~d~w~~~~sp~gwa 153 (358)
+++..||.+||++... ....++|++||||||+||+||.+||||||++|.|
T Consensus 121 ~~~a~~aP~~lF~~~~~---------~~~~~~F~vGMKLEavDp~~p~~icvATV~~V~g-------------------- 171 (324)
T 3ut1_A 121 TCKAQAAPKSLFENQNI---------TVIPSGFRVGMKLEAVDKKNPSFICVATVTDMVD-------------------- 171 (324)
T ss_dssp HTTCCBCCGGGCTTTTC---------CCCCCSCCTTCEEEEEETTEEEEEEEEEEEEEET--------------------
T ss_pred HhCcccCChHHcccCCC---------ccCccccccCCEEEEecCCCCCcEEEEEEEEEEC--------------------
Confidence 4688999999986421 1135899999999999999999999999999643
Q ss_pred ccCCCCcCCCccCCCCCCCccccCCCCCCcCccccccccCCCCCccccccCCccccccCceecccccccccCCceeeeeE
Q psy6236 154 KISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSLAQ 233 (358)
Q Consensus 154 ~~~~~~~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~Gmk~~~~~~~~~~atv~~ 233 (358)
T Consensus 172 -------------------------------------------------------------------------------- 171 (324)
T 3ut1_A 172 -------------------------------------------------------------------------------- 171 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecCceEEEEEcCCCCCCCCCcceEEEecCCCCcccchhhhhcCCCCCCCCCCcc-cccCHhHHHhhcCCCCCCccccCC
Q psy6236 234 VLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKGYTH-ATFSWEQYCRDTNSIPAPPELFNQ 312 (358)
Q Consensus 234 v~~~~~~~v~~D~~~~~~~~~~d~~~~h~~Sp~I~PvGwc~~~g~~L~pP~gy~~-~~F~W~~YL~~~~a~~aP~~~F~~ 312 (358)
+ +|+|+||||++ .+|||| |++|++|||||||++||++|+||+||+. +.|+|++||++++|++||.++|++
T Consensus 172 ---~-~l~v~~Dg~~~----~~d~w~-~~~Sp~I~PVGWCe~~g~~L~pP~gy~~~~~f~W~~YL~~t~a~aaP~~~F~~ 242 (324)
T 3ut1_A 172 ---N-RFLVHFDNWDE----SYDYWC-EASSPHIHPVGWCKEHRRTLITPPGYPNVKHFSWDKYLEETNSLPAPARAFKV 242 (324)
T ss_dssp ---T-EEEEEETTSCG----GGCEEE-CTTCTTEECTTHHHHTTCCEECCTTC--CCSCCHHHHHHHTTCCBCCGGGCCC
T ss_pred ---C-EEEEEECCCCC----cCCEEE-ECCCCCcccCcHHHhcCCCCCCCCCCCCCCcccHHHHHHhhCCCCCCHHHhcc
Confidence 3 37788888865 589998 9999999999999999999999999985 799999999999999999999998
Q ss_pred CCCCCCCCCCCeeeeecCCCCCCcceeEEEeEecceEEEEeCC
Q psy6236 313 KINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQNP 355 (358)
Q Consensus 313 ~~~~~~F~~gmkLEavd~~~p~~icvAtV~~v~g~~~~i~~~~ 355 (358)
. +.|+|++||||||||++||.+||||||++|+|++|+|+||-
T Consensus 243 ~-~~~~F~~gmkLEAvD~~~p~licvATV~~v~g~~l~v~fDg 284 (324)
T 3ut1_A 243 K-PPHGFQKKMKLEVVDKRNPMFIRVATVADTDDHRVKVHFDG 284 (324)
T ss_dssp C-CCCCCCTTCEEEEECSSSTTCEEEEEEEEECSSEEEEEETT
T ss_pred c-ccccCCCCCeeeccCCCCCCceeEEEEEEecCCEEEEEeCC
Confidence 6 57999999999999999999999999999999999999995
No 5
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=100.00 E-value=7.8e-78 Score=584.01 Aligned_cols=236 Identities=30% Similarity=0.529 Sum_probs=216.8
Q ss_pred CEEEEecCCCCCCEEEEEEEEEeCCeEEEEEeC--CCCCEEEeCCCCCeeccchhhhcCccccCCCCCCccccccc----
Q psy6236 1 MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYD--DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGI---- 74 (358)
Q Consensus 1 MkLE~id~~~~~~~~vAtV~~v~G~rl~l~~~~--~~~dfW~~~~S~~IhPVGWc~~ng~~L~pP~~y~~~~~~~~---- 74 (358)
||||++|+++++.+|||||++|+|+||+|||+| +++|||||++|++|||||||++||+.|+||.+|.++.++|.
T Consensus 46 mklE~~D~~~~~~~~vAtV~~v~G~rl~l~~dg~~~~~dFW~~~~S~~IhPvGwc~~~g~~L~pP~~~~~~~f~W~~yL~ 125 (331)
T 1oz2_A 46 MKLEGIDPQHPSMYFILTVAEVCGYRLRLHFDGYSECHDFWVNANSPDIHPAGWFEKTGHKLQPPKGYKEEEFSWSQYLR 125 (331)
T ss_dssp CEEEEEETTEEEEEEEEEEEEEETTEEEEEETTSCGGGCEEEETTCTTEECTTHHHHHTCCEECCTTCCGGGCCHHHHHH
T ss_pred CEEEEEeCCCCCcEEEEEEEEecCCEEEEEECCCCCCCCEEEcCCCCCcccCchHHhcCCcccCccccccccCcHHHHHH
Confidence 999999999999999999999999999999986 67899999999999999999999999999999998888873
Q ss_pred -cCccchhhhcCCCCcCCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEeecceeeccCCCCcc
Q psy6236 75 -RDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGMS 153 (358)
Q Consensus 75 -~~~~~ap~~lF~~~~~~~~~~~~p~~~~~~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~d~w~~~~sp~gwa 153 (358)
+++..||.+||++... ....++|++||||||+|++||.+||||||++|.
T Consensus 126 ~t~a~~aP~~lF~~~~~---------~~~~~~F~vGmKLEavD~~np~~icvATV~~v~--------------------- 175 (331)
T 1oz2_A 126 STRAQAAPKHLFVSQSH---------SPPPLGFQVGMKLEAVDRMNPSLVCVASVTDVV--------------------- 175 (331)
T ss_dssp HHTCCBCCGGGCSCSSC---------SCCCTTCCTTCEEEEECTTSTTCEEEEEEEEEE---------------------
T ss_pred hcCCCCCChHHhcccCC---------CCCccccccccEEEeccCCCCCcEEEEEEEEee---------------------
Confidence 4788999999986422 124689999999999999999999999999954
Q ss_pred ccCCCCcCCCccCCCCCCCccccCCCCCCcCccccccccCCCCCccccccCCccccccCceecccccccccCCceeeeeE
Q psy6236 154 KISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSLAQ 233 (358)
Q Consensus 154 ~~~~~~~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~Gmk~~~~~~~~~~atv~~ 233 (358)
T Consensus 176 -------------------------------------------------------------------------------- 175 (331)
T 1oz2_A 176 -------------------------------------------------------------------------------- 175 (331)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecCceEEEEEcCCCCCCCCCcceEEEecCCCCcccchhhhhcCCCCCCCCCCc-ccccCHhHHHhhcCCCCCCccccCC
Q psy6236 234 VLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKGYT-HATFSWEQYCRDTNSIPAPPELFNQ 312 (358)
Q Consensus 234 v~~~~~~~v~~D~~~~~~~~~~d~~~~h~~Sp~I~PvGwc~~~g~~L~pP~gy~-~~~F~W~~YL~~~~a~~aP~~~F~~ 312 (358)
+++ |+|+||||++ .+|||| |++|++|||||||++||++|+||.||. .+.|+|++||+++++++||.++|+.
T Consensus 176 --g~r-~~v~~Dg~~~----~~D~w~-~~~S~~I~PVGwc~~~g~~L~pP~gy~~~~~f~W~~yL~~~ga~~aP~~~F~~ 247 (331)
T 1oz2_A 176 --DSR-FLVHFDNWDD----TYDYWC-DPSSPYIHPVGWCQKQGKPLTPPQDYPDPDNFCWEKYLEETGASAVPTWAFKV 247 (331)
T ss_dssp --TTE-EEEEETTSCG----GGCEEE-CTTCTTEECTTHHHHHTCCEECSTTCSSGGGCCHHHHHHHHTCCBCCGGGCCC
T ss_pred --CCE-EEEEeCCCCC----ccCEEE-ecCCCCccCCchHHhcCCCCCCCCCCCcCCcccHHHHHHhcCCCcCCHHHccc
Confidence 343 6688888875 689998 999999999999999999999999997 4789999999999999999999998
Q ss_pred CCCCCCCCCCCeeeeecCCCCCCcceeEEEeEecceEEEEeCC
Q psy6236 313 KINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQNP 355 (358)
Q Consensus 313 ~~~~~~F~~gmkLEavd~~~p~~icvAtV~~v~g~~~~i~~~~ 355 (358)
. +.|+|++||||||||++||.+||||||++|.|++|+|+||-
T Consensus 248 ~-~~~~F~~gmKLEavD~~~p~~ic~AtV~~v~~~~l~v~fDg 289 (331)
T 1oz2_A 248 R-PPHSFLVNMKLEAVDRRNPALIRVASVEDVEDHRIKIHFDG 289 (331)
T ss_dssp C-CCCCCCTTCEEEEECSSSTTCEEEEEEEEECSSEEEEEETT
T ss_pred c-cccccccCceeEeecccCCCcEEeeEEEEEcCCEEEEEeCC
Confidence 6 46999999999999999999999999999999999999994
No 6
>3feo_A MBT domain-containing protein 1; MBTL1, structural genomics, structural genomics consortium, metal-binding, nucleus, zinc-finger; 2.50A {Homo sapiens}
Probab=100.00 E-value=2.2e-62 Score=490.71 Aligned_cols=252 Identities=27% Similarity=0.483 Sum_probs=204.4
Q ss_pred CEEEEecCCCCCCEEEEEEEEEeCCeEEEEEeC---CCCCEEEeCCCCCeeccchhhhcCccccCCCCCCccccccccCc
Q psy6236 1 MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYD---DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGIRDR 77 (358)
Q Consensus 1 MkLE~id~~~~~~~~vAtV~~v~G~rl~l~~~~---~~~dfW~~~~S~~IhPVGWc~~ng~~L~pP~~y~~~~~~~~~~~ 77 (358)
||||++|+.+++.+|||||++|+|+||+|||+| +++|||||++|++|||||||++||+.|+||..|+. .+++
T Consensus 160 mkLEv~d~~~~~~~~vAtV~~v~G~rl~Lry~g~~d~~~dFW~~~~S~~IhPvGWc~~~g~~L~pP~~~~~-----~~ga 234 (437)
T 3feo_A 160 MRVEVVDKRHLCRTRVAVVESVIGGRLRLVYEESEDRTDDFWCHMHSPLIHHIGWSRSIGHRFKRSDITKK-----QDGH 234 (437)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEETTEEEEEESSCSSTTCEEEEETTCTTEECTTHHHHHTCCBC--------------CC
T ss_pred CEEEEecCCCCcceEEEEEEEEECCEEEEEEeCCCCCCCCeEEeCCCCCccccchHHhcCCcccCchhhhh-----cccc
Confidence 899999999999999999999999999999986 46899999999999999999999999999987754 3456
Q ss_pred cchhhhcCCCCcCCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCeEEEEEEEecc-eeeEEeeccee----------ec
Q psy6236 78 DDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEG-YMMLEELDEGM----------YY 146 (358)
Q Consensus 78 ~~ap~~lF~~~~~~~~~~~~p~~~~~~~F~vGmKLEavD~~np~~icvATV~~v~G-~~l~~~~d~w~----------~~ 146 (358)
..||.+||++.... ....+.|++||||||+||+||.+||||||++|+| ++++|+||+|- .+
T Consensus 235 ~~aP~~lF~~~~~~--------~~~~~~F~~GMKLEavDp~~p~~icvATV~~v~~~g~l~l~~Dg~~~~~~~d~~~~h~ 306 (437)
T 3feo_A 235 FDTPPHLFAKVKEV--------DQSGEWFKEGMKLEAIDPLNLSTICVATIRKVLADGFLMIGIDGSEAADGSDWFCYHA 306 (437)
T ss_dssp EECCGGGSCCCCCC--------CCSSSCCCTTCEEEEEETTEEEEEEEEEEEEECGGGEEEEEETTCCC-CCTTCEEEET
T ss_pred cCCCHHHhcccccc--------CCCccccccCCEEEEEcCCCCceEEEEEEEEEccCCEEEEEeCCCCCCCCCCeEEeeC
Confidence 78999999875321 1124779999999999999999999999999994 78889998752 23
Q ss_pred cCC----CCccccCCCCcCCCccCCCCCCCccccCCCCCCcCccccccccCCCCCccccccCCccccccCceeccccccc
Q psy6236 147 EDP----TGMSKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFY 222 (358)
Q Consensus 147 ~sp----~gwa~~~~~~~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~Gmk~~~~ 222 (358)
.|| +|||+++|+.|+||.... ...++|+..+...++ ..-|..+|+. ....|.|++|||+|++
T Consensus 307 ~Sp~I~PVGwc~~ng~~L~pP~g~~-----------~~~f~W~~yL~~t~~-~~aP~~lF~~--~~~~~~F~~GMKLEAv 372 (437)
T 3feo_A 307 TSPSIFPVGFCEINMIELTPPRGYT-----------KLPFKWFDYLRETGS-IAAPVKLFNK--DVPNHGFRVGMKLEAV 372 (437)
T ss_dssp TCTTEECTTHHHHHTCCEECCTTCC-----------SSSCCHHHHHHHHTC-CBCCGGGGCC--CCCCCCCCTTCEEEEE
T ss_pred CCCCcccchhHhhcCccccCCCCcc-----------cCcchHHHHHHhhCC-ccCCHHHcCC--CCccccCccCCEEEee
Confidence 465 899999999999983321 123678877664322 1122337775 3578999999999999
Q ss_pred ccCCc----eeeeeEeecCceEEEEEcCCCCCCCCCcceEEEecCCCCcccchhhhhcCCCCCCCCC
Q psy6236 223 TRERR----FCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKG 285 (358)
Q Consensus 223 ~~~~~----~atv~~v~~~~~~~v~~D~~~~~~~~~~d~~~~h~~Sp~I~PvGwc~~~g~~L~pP~g 285 (358)
++.++ +|||++|++ +||+|+||||++ .+|+|| |++|++|||||||++||++|+||.|
T Consensus 373 D~~np~~IcvATV~~v~~-~~l~v~fDgw~~----~~d~w~-~~~S~~I~PvGwC~~~g~~L~pP~g 433 (437)
T 3feo_A 373 DLMEPRLICVATVTRIIH-RLLRIHFDGWEE----EYDQWV-DCESPDLYPVGWCQLTGYQLQPPAS 433 (437)
T ss_dssp CTTSTTCEEEEEEEEEET-TEEEEEETTSCG----GGCEEE-ETTCTTEECTTHHHHHTCCEECCC-
T ss_pred cCCCCCcEEEEEEeEEcC-CEEEEEECCCCC----cCCeEE-eCCCCCcccCcHHHhcCCCCcCCCC
Confidence 99996 699999996 589999999986 578996 9999999999999999999999998
No 7
>3h6z_A Polycomb protein SFMBT; MBT, MBR repeat, aromatic CAGE, chromatin regulator, DNA-BIN metal-binding, nucleus, repressor, transcription; HET: MLZ SUC; 2.80A {Drosophila melanogaster}
Probab=100.00 E-value=6.3e-61 Score=480.54 Aligned_cols=260 Identities=35% Similarity=0.577 Sum_probs=214.0
Q ss_pred CEEEEecCCCCCCEEEEEEEEEeCCeEEEEEeCCCCCEEEeCCCCCeeccchhhhcCccccCCCCCCccccccc-----c
Q psy6236 1 MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYDDDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGI-----R 75 (358)
Q Consensus 1 MkLE~id~~~~~~~~vAtV~~v~G~rl~l~~~~~~~dfW~~~~S~~IhPVGWc~~ng~~L~pP~~y~~~~~~~~-----~ 75 (358)
||||++|++|++.||||||++|+|+|++|+|+|+++|||||++|++|||||||++||+.|+||.+|..+...|+ .
T Consensus 161 mkLE~vD~~~~~~i~vAtV~~v~g~rl~l~~~d~~~dfwc~~~Sp~I~PVGW~~~~g~~L~pP~~y~~~~~~~~~~ll~~ 240 (447)
T 3h6z_A 161 LNLECVDKDRISQVRLATVTKIVGDRLFLRYFDSDDGFWCHEDSPIIHPVGWATTVGHNLAAPQDYLERMLAGREAMIEV 240 (447)
T ss_dssp CEEEEECTTCTTEEEEEEEEEEETTEEEEEETTCSCEEEEETTCTTEECTTHHHHHTCEEECCHHHHHHHHTTTTTCCCC
T ss_pred CEEEEEcCCCCccEEEEEEEEEECCcEEEEEECCCCCEEEeCCCCCccccchHHhcCccccCChhhhccchhHHHHHHhh
Confidence 99999999999999999999999999999998888999999999999999999999999999999987665542 2
Q ss_pred CccchhhhcCCCCcCCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCeEEEEEEEecc-eeeEEeeccee--------e-
Q psy6236 76 DRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEG-YMMLEELDEGM--------Y- 145 (358)
Q Consensus 76 ~~~~ap~~lF~~~~~~~~~~~~p~~~~~~~F~vGmKLEavD~~np~~icvATV~~v~G-~~l~~~~d~w~--------~- 145 (358)
...+||.+||+.....+. .......|+|++|||||||||+|+.+||||||++|.| ++++|++|+|. |
T Consensus 241 ~~~~ap~~LF~~~~~~~~---~~~~~~~~~F~~GMKLEavDp~~~~~icvATV~~V~~~~~~~v~~Dg~~~~~~~~d~f~ 317 (447)
T 3h6z_A 241 HEDDATIELFKMNFTFDE---YYSDGKTNSFVEGMKLEAVDPLNLSSICPATVMAVLKFGYMMIRIDSYQPDASGSDWFC 317 (447)
T ss_dssp CTTBCCGGGSCCSSCTHH---HHTSCCCCCCCTTCEEEEEETTEEEEEEEEEEEEECSTTEEEEEETTSCTTCTTTTCEE
T ss_pred cccCCCHHHccCcccccc---ccccccccccccccEEEeeccCCCCcEEEEEEEEeccCCEEEEEECCCCcccCCCccEE
Confidence 456899999986432100 0011247899999999999999999999999999975 67899999863 2
Q ss_pred --ccC----CCCccccCCCCcCCCccCCCCCCCccccCCCCCCcCccccccccCCCCCccc--cccCCccccccCceecc
Q psy6236 146 --YED----PTGMSKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIP--IQKDGMAVCEKCGAMGV 217 (358)
Q Consensus 146 --~~s----p~gwa~~~~~~~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~k~~~~~~~~~~~~Gm 217 (358)
..| |+|||+.+|+.|+||.... ...+.|...+... ...++| +|+... ..|.|++||
T Consensus 318 ~~~~S~~I~PvGwce~ng~~L~pP~gy~-----------~~~f~W~~yl~~~---~a~~aP~~lF~~~~--~~~~F~~gm 381 (447)
T 3h6z_A 318 YHEKSPCIFPAGFCSVNNISVTPPNGYD-----------SRTFTWEGYLSDT---GAVAAGQHLFHDII--PDHGFEVGM 381 (447)
T ss_dssp EETTCTTEECTTHHHHTTCCCCCCTTCC-----------TTTCCHHHHHHHH---TCCBCCGGGSCCCC--CCCCCCTTC
T ss_pred EeCCCCCcCccchHHhcCccCCCCCCcc-----------ccCCcHHHHHHhh---CCCcCcHHHcCCCC--CCCccccCC
Confidence 244 4899999999999983221 1225666655433 223333 666543 579999999
Q ss_pred cccccccCCc----eeeeeEeecCceEEEEEcCCCCCCCCCcceEEEecCCCCcccchhhhhcCCCCCCCCC
Q psy6236 218 KHAFYTRERR----FCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKG 285 (358)
Q Consensus 218 k~~~~~~~~~----~atv~~v~~~~~~~v~~D~~~~~~~~~~d~~~~h~~Sp~I~PvGwc~~~g~~L~pP~g 285 (358)
|||++++-++ +|||++|.+ ++++|+||||++ .+|+|+ +.+|++|||||||+++|++|+||+.
T Consensus 382 kLEAvD~~np~~icvATV~~v~~-~~~~i~fDgw~~----~~d~w~-~~~S~dI~PvGWC~~~g~~L~~P~~ 447 (447)
T 3h6z_A 382 SLECADLMDPRLVCVATVARVVG-RLLKVHFDGWTD----EYDQWL-DCESADIYPVGWCVLVNHKLEGPPR 447 (447)
T ss_dssp EEEEECTTSTTCEEEEEEEEEET-TEEEEECTTSCG----GGCEEE-ETTCTTEECTTHHHHHTCCEECCCC
T ss_pred EEEeecCCCCCcEEEEEEeEecC-CEEEEEeCCCCC----cCCEEE-ecCCCCccccchhhhcCCCCCCCCC
Confidence 9999999996 699999985 669999999987 678997 9999999999999999999999973
No 8
>3f70_A Lethal(3)malignant brain tumor-like 2 protein; MBT, chromatin regulator, metal-binding, nucleus, transcript transcription regulation, zinc-finger; HET: MLZ; 2.10A {Homo sapiens} PDB: 3dbb_A* 3cey_A
Probab=100.00 E-value=5.5e-59 Score=467.51 Aligned_cols=254 Identities=31% Similarity=0.517 Sum_probs=185.9
Q ss_pred CEEEEecCCCCCCEEEEEEEEEeCCeEEEEEeC--CCCCEEEeCCCCCeeccchhhhcCccccCCCCCCccc--cccccC
Q psy6236 1 MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYD--DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRC--AKGIRD 76 (358)
Q Consensus 1 MkLE~id~~~~~~~~vAtV~~v~G~rl~l~~~~--~~~dfW~~~~S~~IhPVGWc~~ng~~L~pP~~y~~~~--~~~~~~ 76 (358)
||||++|+.+++.+|||||++|+|+|++|+|+| +++|||||++|++|||||||++||+.|+||..+.+-. .....+
T Consensus 158 mkLE~vD~~~~~~~~vAtV~~v~g~rl~l~~~~~~~~~dfWc~~~Sp~IhPVGW~~~~G~~L~pP~~~~dw~~~~~~~~~ 237 (456)
T 3f70_A 158 MRLEVVDKSQVSRTRMAVVDTVIGGRLRLLYEDGDSDDDFWCHMWSPLIHPVGWSRRVGHGIKMSERRSDMAHHPTFRKI 237 (456)
T ss_dssp CEEEEECTTCTTCEEEEEEEEEETTEEEEEECC----CCEEEETTCTTEEETTHHHHHTC--------------------
T ss_pred CEEEEECCCCCcceEEEEEEEEECCEEEEEEcCCCCCCceEEeCCCCCeeccccHhhcCCccCCCccchhHHHHHHhhcc
Confidence 999999999999999999999999999999986 6789999999999999999999999999997432210 011235
Q ss_pred ccchhhhcCCCCcCCCCCCCCCCCCCCCC--CCCCcEEEEecCCCCCCeEEEEEEEec-ceeeEEeeccee-------e-
Q psy6236 77 RDDATEDLFPLSVGTAGTKLSPGTGQTGG--FVVGMKLESVDPLNLSDICVATVMKME-GYMMLEELDEGM-------Y- 145 (358)
Q Consensus 77 ~~~ap~~lF~~~~~~~~~~~~p~~~~~~~--F~vGmKLEavD~~np~~icvATV~~v~-G~~l~~~~d~w~-------~- 145 (358)
+.+||.+||++.... ..++ |++|||||||||+|+..||||||++|. |++++|++|+|- |
T Consensus 238 ~~~ap~~lF~~~~~~----------~~~~~~Fk~GMKLEavDP~~~~~icvATV~~V~~~~~l~l~~Dg~~~~~~~d~f~ 307 (456)
T 3f70_A 238 YCDAVPYLFKKVRAV----------YTEGGWFEEGMKLEAIDPLNLGNICVATVCKVLLDGYLMICVDGGPSTDGLDWFC 307 (456)
T ss_dssp ------------CEE----------ECCSCCCCTTCEEEEEETTEEEEEEEEEEEEECSTTEEEEEEC--------CCEE
T ss_pred cccCCHHHhcccccc----------ccccccccCCCEEEEEcCCCCCcEEEEEEEEEecCCEEEEEecCCCccCCCCcEE
Confidence 678999999864321 2344 999999999999999999999999998 688999999652 2
Q ss_pred --ccC----CCCccccCCCCcCCCccCCCCCCCccccCCCCCCcCccccccccCCCCCccc--cccCCccccccCceecc
Q psy6236 146 --YED----PTGMSKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIP--IQKDGMAVCEKCGAMGV 217 (358)
Q Consensus 146 --~~s----p~gwa~~~~~~~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~k~~~~~~~~~~~~Gm 217 (358)
..| |+|||..+|+.|+||..-. ..-+.|...+... ...++| +|+. ....|.|++||
T Consensus 308 ~h~~Sp~I~PVGwce~ng~~L~pP~gy~-----------~~~f~W~~yL~~~---~~~~aP~~lF~~--~~~~~~F~~GM 371 (456)
T 3f70_A 308 YHASSHAIFPATFCQKNDIELTPPKGYE-----------AQTFNWENYLEKT---KSKAAPSRLFNM--DCPNHGFKVGM 371 (456)
T ss_dssp EETTCTTEECTTHHHHTTCCEECCTTCC-----------SSSCCHHHHHHHH---TCCBCCGGGSCC--CCCCCCCCTTC
T ss_pred EeCCCCCccccchHHHcCccccCCcccc-----------cccccHHHHHHhh---CCccCCHHHhCc--CCCccccccCC
Confidence 245 4899999999999982211 1125666655433 223333 6654 23578999999
Q ss_pred cccccccCCc----eeeeeEeecCceEEEEEcCCCCCCCCCcceEEEecCCCCcccchhhhhcCCCCCCCCCC
Q psy6236 218 KHAFYTRERR----FCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKGY 286 (358)
Q Consensus 218 k~~~~~~~~~----~atv~~v~~~~~~~v~~D~~~~~~~~~~d~~~~h~~Sp~I~PvGwc~~~g~~L~pP~gy 286 (358)
|||++++.+. +|||++|.+ ++++|+||||+. .+|+|+ +.+|++|||||||++||++|+||.+.
T Consensus 372 KLEAvD~~np~~icvATV~~v~~-~~l~i~fDgw~~----~~d~w~-~~~S~~I~PvGwCe~~g~~L~pP~~~ 438 (456)
T 3f70_A 372 KLEAVDLMEPRLICVATVKRVVH-RLLSIHFDGWDS----EYDQWV-DCESPDIYPVGWCELTGYQLQPPVAA 438 (456)
T ss_dssp EEEEECTTSTTCEEEEEEEEEET-TEEEEEETTSCG----GGCEEE-ETTCTTEECTTHHHHHTCCEECSSSS
T ss_pred EEEeecCCCCCcEEEEEEEEecC-CEEEEEeCCCCC----CCCeEe-ecCCCCcccccHHHhcCCCCCCcCCC
Confidence 9999999996 699999994 589999999986 678997 89999999999999999999999984
No 9
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=100.00 E-value=3.2e-55 Score=408.05 Aligned_cols=193 Identities=24% Similarity=0.244 Sum_probs=148.8
Q ss_pred CCCeeccchhhhcCccccCCCCCCccccccc-----cCccchhhhcCCCCcCCCCCCCCCCCCCCCCCCCCcEEEEecCC
Q psy6236 44 SPLIHPVGWARRTGHLISAPPLYTDRCAKGI-----RDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPL 118 (358)
Q Consensus 44 S~~IhPVGWc~~ng~~L~pP~~y~~~~~~~~-----~~~~~ap~~lF~~~~~~~~~~~~p~~~~~~~F~vGmKLEavD~~ 118 (358)
+.+.-|||||++|+..|.||++|....++|. +++.+||.+||++... ...++|++||||||+|++
T Consensus 6 ~~~~~~v~w~~~~~~~~~pp~~~~~~~f~W~~yL~~t~~~aaP~~lF~~~~~----------~~~~~f~vGmKLEa~D~~ 75 (243)
T 2biv_A 6 NEDSMDVKKENQEKTPQSSTSSVQRDDFHWEEYLKETGSISAPSECFRQSQI----------PPVNDFKVGMKLEARDPR 75 (243)
T ss_dssp --------------------------CCCHHHHHHHHTCCBCCGGGSSSCSS----------CCCCCCCTTCEEEEEETT
T ss_pred cCCccccceeecCCccCCCCCccccCCCCHHHHHHHcCCccCCHHHHcCCCC----------CCcccccCCCEEEEecCC
Confidence 4456799999999999999999999888883 4788999999986421 246899999999999999
Q ss_pred CCCCeEEEEEEEecceeeEEeecceeeccCCCCccccCCCCcCCCccCCCCCCCccccCCCCCCcCccccccccCCCCCc
Q psy6236 119 NLSDICVATVMKMEGYMMLEELDEGMYYEDPTGMSKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNV 198 (358)
Q Consensus 119 np~~icvATV~~v~G~~l~~~~d~w~~~~sp~gwa~~~~~~~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 198 (358)
|+.+||||||++|.|+|
T Consensus 76 ~~~~~~vATV~~v~g~~--------------------------------------------------------------- 92 (243)
T 2biv_A 76 NATSVCIATVIGITGAR--------------------------------------------------------------- 92 (243)
T ss_dssp EEEEEEEEEEEEEETTE---------------------------------------------------------------
T ss_pred CCCcEEEEEEEEEeCCE---------------------------------------------------------------
Confidence 99999999999975544
Q ss_pred cccccCCccccccCceecccccccccCCceeeeeEeecCceEEEEEcCCCCCCCCCcceEEEecCCCCcccchhhhhcCC
Q psy6236 199 IPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGI 278 (358)
Q Consensus 199 ~~~~k~~~~~~~~~~~~Gmk~~~~~~~~~~atv~~v~~~~~~~v~~D~~~~~~~~~~d~~~~h~~Sp~I~PvGwc~~~g~ 278 (358)
++|+|||+++ .+|||| |.+|++|||||||++||+
T Consensus 93 -----------------------------------------l~l~~dG~d~----~~DfW~-~~~S~~I~PvGwc~~~g~ 126 (243)
T 2biv_A 93 -----------------------------------------LRLRLDGSDN----RNDFWR-LVDSPDIQPVGTCEKEGD 126 (243)
T ss_dssp -----------------------------------------EEEEETTSCS----SSCEEE-ETTCTTEECTTHHHHTTC
T ss_pred -----------------------------------------EEEEECCCCC----CCCEee-cCCCCccccChhHHhcCC
Confidence 6677777764 578997 999999999999999999
Q ss_pred CCCCCCCCcccccCHhHHHhhc--CCCCCCccccCCCC---CCCCCCCCCeeeeecCCCCCCcceeEEEeEecceEEEEe
Q psy6236 279 NLTPPKGYTHATFSWEQYCRDT--NSIPAPPELFNQKI---NGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQ 353 (358)
Q Consensus 279 ~L~pP~gy~~~~F~W~~YL~~~--~a~~aP~~~F~~~~---~~~~F~~gmkLEavd~~~p~~icvAtV~~v~g~~~~i~~ 353 (358)
.|+||.||..+.|+|.+||+++ ||++||.++|+... +.++|++||||||||++||.+||||||++|.|++|+|+|
T Consensus 127 ~L~pP~g~~~~~f~W~~yL~~tl~ga~~aP~~lF~~~~~~~~~~~F~~GmKLEavD~~~p~~icvATV~~v~g~rl~v~f 206 (243)
T 2biv_A 127 LLQPPLGYQMNTSSWPMFLLKTLNGSEMASATLFKKEPPKPPLNNFKVGMKLEAIDKKNPYLICPATIGDVKGDEVHITF 206 (243)
T ss_dssp CCCCCTTCSSCGGGHHHHHHHHHTTCCBCCGGGSCCCCCCCSSCCCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEEE
T ss_pred ccCCCcccccccchHHHHHHHhccCCccCCHHHhccCCCCCccccccCCCEEEEEccCCCCeEEEEEEEEecCCEEEEEE
Confidence 9999999999999999999995 99999999998763 348999999999999999999999999999999999999
Q ss_pred CC
Q psy6236 354 NP 355 (358)
Q Consensus 354 ~~ 355 (358)
|-
T Consensus 207 Dg 208 (243)
T 2biv_A 207 DG 208 (243)
T ss_dssp TT
T ss_pred CC
Confidence 95
No 10
>2biv_A SCML2 protein, sex COMB on midleg-like protein 2; MBT, malignant brain tumor, transcription factor; 1.7A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 PDB: 1oi1_A 2vyt_A* 2p0k_A
Probab=100.00 E-value=2e-53 Score=396.01 Aligned_cols=167 Identities=31% Similarity=0.493 Sum_probs=149.0
Q ss_pred CEEEEecCCCCCCEEEEEEEEEeCCeEEEEEeC--CCCCEEEeCCCCCeeccchhhhcCccccCCCCCCccccccc----
Q psy6236 1 MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYD--DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGI---- 74 (358)
Q Consensus 1 MkLE~id~~~~~~~~vAtV~~v~G~rl~l~~~~--~~~dfW~~~~S~~IhPVGWc~~ng~~L~pP~~y~~~~~~~~---- 74 (358)
|||||+|++|++.||||||++|+|+||+|||+| +++||||+++|++|||||||++||+.|+||.+|..+.++|.
T Consensus 67 mKLEa~D~~~~~~~~vATV~~v~g~~l~l~~dG~d~~~DfW~~~~S~~I~PvGwc~~~g~~L~pP~g~~~~~f~W~~yL~ 146 (243)
T 2biv_A 67 MKLEARDPRNATSVCIATVIGITGARLRLRLDGSDNRNDFWRLVDSPDIQPVGTCEKEGDLLQPPLGYQMNTSSWPMFLL 146 (243)
T ss_dssp CEEEEEETTEEEEEEEEEEEEEETTEEEEEETTSCSSSCEEEETTCTTEECTTHHHHTTCCCCCCTTCSSCGGGHHHHHH
T ss_pred CEEEEecCCCCCcEEEEEEEEEeCCEEEEEECCCCCCCCEeecCCCCccccChhHHhcCCccCCCcccccccchHHHHHH
Confidence 999999999999999999999999999999986 56899999999999999999999999999999998777773
Q ss_pred ---cCccchhhhcCCCCcCCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEeecceeeccCCCC
Q psy6236 75 ---RDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTG 151 (358)
Q Consensus 75 ---~~~~~ap~~lF~~~~~~~~~~~~p~~~~~~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~d~w~~~~sp~g 151 (358)
.++..||.++|+.... ....++|++||||||+|++||.+||||||++|.|+|
T Consensus 147 ~tl~ga~~aP~~lF~~~~~---------~~~~~~F~~GmKLEavD~~~p~~icvATV~~v~g~r---------------- 201 (243)
T 2biv_A 147 KTLNGSEMASATLFKKEPP---------KPPLNNFKVGMKLEAIDKKNPYLICPATIGDVKGDE---------------- 201 (243)
T ss_dssp HHHTTCCBCCGGGSCCCCC---------CCSSCCCCTTCEEEEECTTSTTCEEEEEEEEEETTE----------------
T ss_pred HhccCCccCCHHHhccCCC---------CCccccccCCCEEEEEccCCCCeEEEEEEEEecCCE----------------
Confidence 3788999999986532 124689999999999999999999999999975544
Q ss_pred ccccCCCCcCCCccCCCCCCCccccCCCCCCcCccccccccCCCCCccccccCCccccccCceecccccccccCCceeee
Q psy6236 152 MSKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSL 231 (358)
Q Consensus 152 wa~~~~~~~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~Gmk~~~~~~~~~~atv 231 (358)
T Consensus 202 -------------------------------------------------------------------------------- 201 (243)
T 2biv_A 202 -------------------------------------------------------------------------------- 201 (243)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEeecCceEEEEEcCCCCCCCCCcceEEEecCCCCcccchhhhhcCCCCCCCCC
Q psy6236 232 AQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKG 285 (358)
Q Consensus 232 ~~v~~~~~~~v~~D~~~~~~~~~~d~~~~h~~Sp~I~PvGwc~~~g~~L~pP~g 285 (358)
++|+||||++ .+|||| |.+||+|||||||+++|++|+||..
T Consensus 202 --------l~v~fDgw~~----~~D~W~-~~dSp~I~PvGWc~~~g~~L~pP~~ 242 (243)
T 2biv_A 202 --------VHITFDGWSG----AFDYWC-KYDSRDIFPAGWCRLTGDVLQPPGT 242 (243)
T ss_dssp --------EEEEETTSCG----GGCEEE-ETTCTTEECTTHHHHHTCCBCCCCC
T ss_pred --------EEEEECCCCC----cCCEEE-eCCCCCeecCchHHhhCCCCCCcCC
Confidence 4567777765 689998 9999999999999999999999964
No 11
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=100.00 E-value=7.2e-53 Score=395.92 Aligned_cols=169 Identities=26% Similarity=0.452 Sum_probs=150.7
Q ss_pred CEEEEecCCCCCCEEEEEEEEEeCCeEEEEEeC--CCCCEEEeCCCCCeeccchhhhcCccccCCCCCCccccccc----
Q psy6236 1 MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYD--DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGI---- 74 (358)
Q Consensus 1 MkLE~id~~~~~~~~vAtV~~v~G~rl~l~~~~--~~~dfW~~~~S~~IhPVGWc~~ng~~L~pP~~y~~~~~~~~---- 74 (358)
|||||+|+++++.||||||++|+|+||+|||+| +.+|||||++|++|||||||++||+.|+||.+|..+.++|.
T Consensus 39 MKLEavDp~~~~~icvATV~~v~g~~l~l~~DG~d~~~DfW~~~~S~~I~PvGwc~~~g~~L~pP~g~~~~~f~W~~yL~ 118 (265)
T 2r58_A 39 MKLEALDPRNVTSTCIATVVGVLGSRLRLRLDGSDSQNDFWRLVDSTEIHAIGHCEKNGGMLQPPLGFCMNASSWPGYLC 118 (265)
T ss_dssp CEEEEEETTEEEEEEEEEEEEEETTEEEEEETTSCSSCCEEEETTCTTEECTTHHHHTTCCCCCCTTCSSCGGGHHHHHH
T ss_pred CEeEEecCCCCCCEEEEEEEEEeCCEEEEEeCCCCCcCCEeEeCCCCCeeccccHHhcCCcccCccccccCcCCHHHHHH
Confidence 999999999999999999999999999999986 67899999999999999999999999999999998877773
Q ss_pred ---cCccchhhhcCCCCcCCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEeecceeeccCCCC
Q psy6236 75 ---RDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTG 151 (358)
Q Consensus 75 ---~~~~~ap~~lF~~~~~~~~~~~~p~~~~~~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~d~w~~~~sp~g 151 (358)
.++..||.++|+.... ....++|++||||||+|++||.+||||||++|+|+|
T Consensus 119 ktl~ga~~aP~~lF~~~~~---------~~~~~~F~vGMKLEavD~~np~~icvATV~~v~g~r---------------- 173 (265)
T 2r58_A 119 KILNNAMVAPEEIFQPEPP---------EPEENLFKVGQKLEAVDKKNPQLICCATVDAIKDDQ---------------- 173 (265)
T ss_dssp HHHTTCCBCCGGGSCCCCC---------CCSSCCCCTTCEEEEECTTSTTCEEEEEEEEEETTE----------------
T ss_pred HhhcCCccCCHHHhcccCC---------CCcccccccCcEEEeccCCCCCCEEEEEEEEecCCE----------------
Confidence 3788999999986421 124689999999999999999999999999986655
Q ss_pred ccccCCCCcCCCccCCCCCCCccccCCCCCCcCccccccccCCCCCccccccCCccccccCceecccccccccCCceeee
Q psy6236 152 MSKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSL 231 (358)
Q Consensus 152 wa~~~~~~~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~Gmk~~~~~~~~~~atv 231 (358)
T Consensus 174 -------------------------------------------------------------------------------- 173 (265)
T 2r58_A 174 -------------------------------------------------------------------------------- 173 (265)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEeecCceEEEEEcCCCCCCCCCcceEEEecCCCCcccchhhhhcCCCCCCCCCCc
Q psy6236 232 AQVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKGYT 287 (358)
Q Consensus 232 ~~v~~~~~~~v~~D~~~~~~~~~~d~~~~h~~Sp~I~PvGwc~~~g~~L~pP~gy~ 287 (358)
|+|+||||++ .+|||| +.+|++|||||||+++|++|+||.++.
T Consensus 174 --------l~v~fDGw~~----~~D~W~-~~~Sp~I~PvGWc~~~g~~L~pP~~~~ 216 (265)
T 2r58_A 174 --------IHVTFDGWRG----AFDYWC-NYRSRDIFPAGWCARSCHPMQPPGHKS 216 (265)
T ss_dssp --------EEEEETTSCG----GGCEEE-ETTCTTEECTTHHHHHTCCCBCCCCCC
T ss_pred --------EEEEeCCCCC----cCCEEE-ECCCCCeecCchHHhcCCcCCCCCCcC
Confidence 5566666654 579998 899999999999999999999999876
No 12
>3ut1_A Lethal(3)malignant brain tumor-like protein 3; chromatin modification, transcription repression, MBT repeat structural genomics; HET: EPE; 2.05A {Homo sapiens} PDB: 4fl6_A* 1wjs_A
Probab=100.00 E-value=7.2e-53 Score=407.33 Aligned_cols=165 Identities=32% Similarity=0.518 Sum_probs=145.7
Q ss_pred CEEEEecCCCCCCEEEEEEEEEeCCeEEEEEeC--CCCCEEEeCCCCCeeccchhhhcCccccCCCCCCc-cccccc---
Q psy6236 1 MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYD--DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTD-RCAKGI--- 74 (358)
Q Consensus 1 MkLE~id~~~~~~~~vAtV~~v~G~rl~l~~~~--~~~dfW~~~~S~~IhPVGWc~~ng~~L~pP~~y~~-~~~~~~--- 74 (358)
|||||+||+|++.||||||++|+|+||+|||+| +.+|||||++|++|||||||++||+.|+||.||.. +.++|.
T Consensus 148 MKLEavDp~~p~~icvATV~~V~g~~l~v~~Dg~~~~~d~w~~~~Sp~I~PVGWCe~~g~~L~pP~gy~~~~~f~W~~YL 227 (324)
T 3ut1_A 148 MKLEAVDKKNPSFICVATVTDMVDNRFLVHFDNWDESYDYWCEASSPHIHPVGWCKEHRRTLITPPGYPNVKHFSWDKYL 227 (324)
T ss_dssp CEEEEEETTEEEEEEEEEEEEEETTEEEEEETTSCGGGCEEECTTCTTEECTTHHHHTTCCEECCTTC--CCSCCHHHHH
T ss_pred CEEEEecCCCCCcEEEEEEEEEECCEEEEEECCCCCcCCEEEECCCCCcccCcHHHhcCCCCCCCCCCCCCCcccHHHHH
Confidence 999999999999999999999999999999986 67999999999999999999999999999999986 567773
Q ss_pred --cCccchhhhcCCCCcCCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEeecceeeccCCCCc
Q psy6236 75 --RDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGM 152 (358)
Q Consensus 75 --~~~~~ap~~lF~~~~~~~~~~~~p~~~~~~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~d~w~~~~sp~gw 152 (358)
+++.+||+++|+.. ..++|++||||||||++||.+||||||++|+|+|++
T Consensus 228 ~~t~a~aaP~~~F~~~-------------~~~~F~~gmkLEAvD~~~p~licvATV~~v~g~~l~--------------- 279 (324)
T 3ut1_A 228 EETNSLPAPARAFKVK-------------PPHGFQKKMKLEVVDKRNPMFIRVATVADTDDHRVK--------------- 279 (324)
T ss_dssp HHTTCCBCCGGGCCCC-------------CCCCCCTTCEEEEECSSSTTCEEEEEEEEECSSEEE---------------
T ss_pred HhhCCCCCCHHHhccc-------------ccccCCCCCeeeccCCCCCCceeEEEEEEecCCEEE---------------
Confidence 57889999999842 258999999999999999999999999998776655
Q ss_pred cccCCCCcCCCccCCCCCCCccccCCCCCCcCccccccccCCCCCccccccCCccccccCceecccccccccCCceeeee
Q psy6236 153 SKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSLA 232 (358)
Q Consensus 153 a~~~~~~~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~Gmk~~~~~~~~~~atv~ 232 (358)
T Consensus 280 -------------------------------------------------------------------------------- 279 (324)
T 3ut1_A 280 -------------------------------------------------------------------------------- 279 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeecCceEEEEEcCCCCCCCCCcceEEEecCCCCcccchhhhhcCCCCCCCCCCc
Q psy6236 233 QVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKGYT 287 (358)
Q Consensus 233 ~v~~~~~~~v~~D~~~~~~~~~~d~~~~h~~Sp~I~PvGwc~~~g~~L~pP~gy~ 287 (358)
|+||||++ .+|+|| +.+|++|||||||+++|++|+||.++.
T Consensus 280 ---------v~fDgw~~----~~d~w~-~~~S~dI~PvGWC~~~g~~LqpP~~~~ 320 (324)
T 3ut1_A 280 ---------VHFDGWNN----CYDYWI-DADSPDIHPVGWCSKTGHPLQPPLSPL 320 (324)
T ss_dssp ---------EEETTSCG----GGCEEE-ETTCTTEECTTHHHHHTCCCBCSCC--
T ss_pred ---------EEeCCCCC----CCCEEE-eCCCCCeeceehHhhcCCCCcCcCCCc
Confidence 55555554 578997 999999999999999999999999986
No 13
>1oz2_A Lethal(3)malignant brain tumor-like protein; propeller, transcription repressor, three malignant brain TU repeats, transcription; HET: MES; 1.55A {Homo sapiens} SCOP: b.34.9.3 b.34.9.3 b.34.9.3 PDB: 1oyx_A* 1oz3_A* 3oq5_A* 2rhi_A* 2rhx_A* 2rjd_A 2rjc_A 2rje_A* 2rjf_A* 3uwn_A* 2pqw_A* 3p8h_A* 2rhu_A* 2rhy_A* 2rhz_A* 2ri3_A* 2ri2_A* 2ri5_A*
Probab=100.00 E-value=7e-52 Score=401.96 Aligned_cols=165 Identities=33% Similarity=0.556 Sum_probs=148.2
Q ss_pred CEEEEecCCCCCCEEEEEEEEEeCCeEEEEEeC--CCCCEEEeCCCCCeeccchhhhcCccccCCCCCCc-cccccc---
Q psy6236 1 MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYD--DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTD-RCAKGI--- 74 (358)
Q Consensus 1 MkLE~id~~~~~~~~vAtV~~v~G~rl~l~~~~--~~~dfW~~~~S~~IhPVGWc~~ng~~L~pP~~y~~-~~~~~~--- 74 (358)
|||||+|++|++.||||||++|+|+||+|||+| +++|||||++|++|||||||++||+.|+||.+|.. +.+.|.
T Consensus 153 mKLEavD~~np~~icvATV~~v~g~r~~v~~Dg~~~~~D~w~~~~S~~I~PVGwc~~~g~~L~pP~gy~~~~~f~W~~yL 232 (331)
T 1oz2_A 153 MKLEAVDRMNPSLVCVASVTDVVDSRFLVHFDNWDDTYDYWCDPSSPYIHPVGWCQKQGKPLTPPQDYPDPDNFCWEKYL 232 (331)
T ss_dssp CEEEEECTTSTTCEEEEEEEEEETTEEEEEETTSCGGGCEEECTTCTTEECTTHHHHHTCCEECSTTCSSGGGCCHHHHH
T ss_pred cEEEeccCCCCCcEEEEEEEEeeCCEEEEEeCCCCCccCEEEecCCCCccCCchHHhcCCCCCCCCCCCcCCcccHHHHH
Confidence 999999999999999999999999999999987 67999999999999999999999999999999975 456663
Q ss_pred --cCccchhhhcCCCCcCCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEeecceeeccCCCCc
Q psy6236 75 --RDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGM 152 (358)
Q Consensus 75 --~~~~~ap~~lF~~~~~~~~~~~~p~~~~~~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~d~w~~~~sp~gw 152 (358)
+++.+||+++|+.. ..|+|++||||||||++||.+||||||++|.|++
T Consensus 233 ~~~ga~~aP~~~F~~~-------------~~~~F~~gmKLEavD~~~p~~ic~AtV~~v~~~~----------------- 282 (331)
T 1oz2_A 233 EETGASAVPTWAFKVR-------------PPHSFLVNMKLEAVDRRNPALIRVASVEDVEDHR----------------- 282 (331)
T ss_dssp HHHTCCBCCGGGCCCC-------------CCCCCCTTCEEEEECSSSTTCEEEEEEEEECSSE-----------------
T ss_pred HhcCCCcCCHHHcccc-------------cccccccCceeEeecccCCCcEEeeEEEEEcCCE-----------------
Confidence 47889999999753 2589999999999999999999999999975544
Q ss_pred cccCCCCcCCCccCCCCCCCccccCCCCCCcCccccccccCCCCCccccccCCccccccCceecccccccccCCceeeee
Q psy6236 153 SKISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSLA 232 (358)
Q Consensus 153 a~~~~~~~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~Gmk~~~~~~~~~~atv~ 232 (358)
T Consensus 283 -------------------------------------------------------------------------------- 282 (331)
T 1oz2_A 283 -------------------------------------------------------------------------------- 282 (331)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EeecCceEEEEEcCCCCCCCCCcceEEEecCCCCcccchhhhhcCCCCCCCCCCc
Q psy6236 233 QVLNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKGYT 287 (358)
Q Consensus 233 ~v~~~~~~~v~~D~~~~~~~~~~d~~~~h~~Sp~I~PvGwc~~~g~~L~pP~gy~ 287 (358)
|+|+||||+. .+|||| |.+|++|||||||+++|++|+||.++.
T Consensus 283 -------l~v~fDgw~~----~~d~w~-~~dS~~I~PvGWc~~~g~~L~pP~~~~ 325 (331)
T 1oz2_A 283 -------IKIHFDGWSH----GYDFWI-DADHPDIHPAGWCSKTGHPLQPPLGPR 325 (331)
T ss_dssp -------EEEEETTBCG----GGCEEE-ETTCTTEECTTHHHHHTCCCBCCCCTT
T ss_pred -------EEEEeCCCCC----cCCEEE-ECCCCCccccchHHhcCCCCCCcCCCC
Confidence 5566666654 578997 999999999999999999999999986
No 14
>2r58_A Polycomb protein SCM; MBT repeat, sex COMB on midleg, DI-methyl lysine, regulator, developmental protein, metal-binding, nucleus; HET: MLY; 2.00A {Drosophila melanogaster} PDB: 2r57_A* 2r5a_A* 2r5m_A*
Probab=100.00 E-value=3.2e-48 Score=364.36 Aligned_cols=162 Identities=24% Similarity=0.377 Sum_probs=145.2
Q ss_pred cCccchhhhcCCCCcCCCCCCCCCCCCCCCCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEeecceeeccCCCCccc
Q psy6236 75 RDRDDATEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGMSK 154 (358)
Q Consensus 75 ~~~~~ap~~lF~~~~~~~~~~~~p~~~~~~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~d~w~~~~sp~gwa~ 154 (358)
+++.+||.+||++... ...++|++||||||+|++|+.+||||||++|.|+
T Consensus 14 ~~a~~aP~~~Fk~~~~----------~~~~~F~vGMKLEavDp~~~~~icvATV~~v~g~-------------------- 63 (265)
T 2r58_A 14 TGSEAAPAKCFKQAQN----------PPNNDFKIGMKLEALDPRNVTSTCIATVVGVLGS-------------------- 63 (265)
T ss_dssp TTCCBCCGGGSSSCSS----------CCCCCCCTTCEEEEEETTEEEEEEEEEEEEEETT--------------------
T ss_pred cCCccCCHHHhcCCCC----------CCccccccCCEeEEecCCCCCCEEEEEEEEEeCC--------------------
Confidence 4678999999987531 2478999999999999999999999999996443
Q ss_pred cCCCCcCCCccCCCCCCCccccCCCCCCcCccccccccCCCCCccccccCCccccccCceecccccccccCCceeeeeEe
Q psy6236 155 ISNTATQPAVNSHHGPNRKIKPVKHPGLKLQTPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSLAQV 234 (358)
Q Consensus 155 ~~~~~~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~Gmk~~~~~~~~~~atv~~v 234 (358)
T Consensus 64 -------------------------------------------------------------------------------- 63 (265)
T 2r58_A 64 -------------------------------------------------------------------------------- 63 (265)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecCceEEEEEcCCCCCCCCCcceEEEecCCCCcccchhhhhcCCCCCCCCCCcccccCHhHHHhhc--CCCCCCccccCC
Q psy6236 235 LNDRFMMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTPPKGYTHATFSWEQYCRDT--NSIPAPPELFNQ 312 (358)
Q Consensus 235 ~~~~~~~v~~D~~~~~~~~~~d~~~~h~~Sp~I~PvGwc~~~g~~L~pP~gy~~~~F~W~~YL~~~--~a~~aP~~~F~~ 312 (358)
+++|+|||++. .+|||| |++|++|||||||++||++|+||.||..+.|+|.+||+++ +|++||.++|+.
T Consensus 64 ----~l~l~~DG~d~----~~DfW~-~~~S~~I~PvGwc~~~g~~L~pP~g~~~~~f~W~~yL~ktl~ga~~aP~~lF~~ 134 (265)
T 2r58_A 64 ----RLRLRLDGSDS----QNDFWR-LVDSTEIHAIGHCEKNGGMLQPPLGFCMNASSWPGYLCKILNNAMVAPEEIFQP 134 (265)
T ss_dssp ----EEEEEETTSCS----SCCEEE-ETTCTTEECTTHHHHTTCCCCCCTTCSSCGGGHHHHHHHHHTTCCBCCGGGSCC
T ss_pred ----EEEEEeCCCCC----cCCEeE-eCCCCCeeccccHHhcCCcccCccccccCcCCHHHHHHHhhcCCccCCHHHhcc
Confidence 36788888865 578997 9999999999999999999999999999999999999995 999999999997
Q ss_pred CCC---CCCCCCCCeeeeecCCCCCCcceeEEEeEecceEEEEeCC
Q psy6236 313 KIN---GEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQNP 355 (358)
Q Consensus 313 ~~~---~~~F~~gmkLEavd~~~p~~icvAtV~~v~g~~~~i~~~~ 355 (358)
..+ .++|++||||||||++||.+||||||++|+|++|+|+||-
T Consensus 135 ~~~~~~~~~F~vGMKLEavD~~np~~icvATV~~v~g~rl~v~fDG 180 (265)
T 2r58_A 135 EPPEPEENLFKVGQKLEAVDKKNPQLICCATVDAIKDDQIHVTFDG 180 (265)
T ss_dssp CCCCCSSCCCCTTCEEEEECTTSTTCEEEEEEEEEETTEEEEEETT
T ss_pred cCCCCcccccccCcEEEeccCCCCCCEEEEEEEEecCCEEEEEeCC
Confidence 643 4799999999999999999999999999999999999994
No 15
>1wjr_A KIAA1617 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=99.97 E-value=1.4e-32 Score=231.64 Aligned_cols=111 Identities=16% Similarity=0.266 Sum_probs=94.6
Q ss_pred CCCCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEeecceeeccCCCCccccCCCCcCCCccCCCCCCCccccCCCCC
Q psy6236 102 QTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGMSKISNTATQPAVNSHHGPNRKIKPVKHPG 181 (358)
Q Consensus 102 ~~~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~d~w~~~~sp~gwa~~~~~~~~p~~~~~~~~~~~i~~~~~~~ 181 (358)
+.++|++||||||+|++||.+||||||++++|+|++|+|||
T Consensus 8 p~~~f~~GmKLEa~D~~~p~~~~vAtV~~v~g~rl~l~~dG--------------------------------------- 48 (127)
T 1wjr_A 8 PIDLITVGSLIELQDSQNPFQYWIVSVIENVGGRLRLRYVG--------------------------------------- 48 (127)
T ss_dssp HHHHCCTTCEEEEECSSCSSCEEEEECCCEETTEEEECBTT---------------------------------------
T ss_pred chhhccCCCEeEEecCCCCCcEEEEEEeeeeCCEEEEEecC---------------------------------------
Confidence 35789999999999999999999999999887776655555
Q ss_pred CcCccccccccCCCCCccccccCCccccccCceecccccccccCCceeeeeEeecCceEEEEEcCCCCCCCCCcceEEEe
Q psy6236 182 LKLQTPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYH 261 (358)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~Gmk~~~~~~~~~~atv~~v~~~~~~~v~~D~~~~~~~~~~d~~~~h 261 (358)
|+++ +.+|||| +
T Consensus 49 -----------------------------------------------------------------~~~~--~~~D~W~-~ 60 (127)
T 1wjr_A 49 -----------------------------------------------------------------LEDT--ESYDQWL-F 60 (127)
T ss_dssp -----------------------------------------------------------------CSSC--CSSCEEE-E
T ss_pred -----------------------------------------------------------------CCCC--CCCCEeE-e
Confidence 4431 2579997 8
Q ss_pred cCCCCcccchhhhhcCCCCCCCCCCcc--cccCHhHHHhh--cCC--CCCCccccCCCC--CCCCC
Q psy6236 262 MSSPYIFAPGFCAAHGINLTPPKGYTH--ATFSWEQYCRD--TNS--IPAPPELFNQKI--NGEAL 319 (358)
Q Consensus 262 ~~Sp~I~PvGwc~~~g~~L~pP~gy~~--~~F~W~~YL~~--~~a--~~aP~~~F~~~~--~~~~F 319 (358)
.+|++|||||||+++|++|+||.+|.. ..|+|.+||++ ++| .+||.++|+..+ +.|+|
T Consensus 61 ~~s~~I~PvGWc~~~g~~L~pP~~~~~~~~~~~W~~yL~~~l~~a~~~~~P~~lFk~~~~~~~h~~ 126 (127)
T 1wjr_A 61 YLDYRLRPVGWCQENKYRMDPPSEIYPLKMASEWKCTLEKSLIDAAKFPLPMEVFKDHADLSGPSS 126 (127)
T ss_dssp TTCSSCBCTTTHHHHCCCBCCCTTTTTTSCHHHHHHHHHHHHHHHHHSCCCGGGGCCCCCCCCCCC
T ss_pred CCCCCccccCcHHhhCCccCCcccccCCCCcCCHHHHHHHHhcccccccCCHHHhCCCCCCCCCCC
Confidence 999999999999999999999999984 57999999999 566 899999999874 34666
No 16
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=99.95 E-value=3.4e-28 Score=198.03 Aligned_cols=78 Identities=31% Similarity=0.451 Sum_probs=68.6
Q ss_pred CCCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEeecceeeccCCCCccccCCCCcCCCccCCCCCCCccccCCCCCC
Q psy6236 103 TGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGMSKISNTATQPAVNSHHGPNRKIKPVKHPGL 182 (358)
Q Consensus 103 ~~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~d~w~~~~sp~gwa~~~~~~~~p~~~~~~~~~~~i~~~~~~~~ 182 (358)
.++|++||||||+|++||.+||||||++|.|+|
T Consensus 11 ~~~F~~GMKLEAvD~~~p~~icvATV~~v~g~r----------------------------------------------- 43 (107)
T 1wjq_A 11 PHGFQKKMKLEVVDKRNPMFIRVATVADTDDHR----------------------------------------------- 43 (107)
T ss_dssp SSSCCSSCEEEEECTTCTTCEEEEEEEEECSSC-----------------------------------------------
T ss_pred cccCCCCCEEEEEcCCCCCcEEeEEEEEecCCE-----------------------------------------------
Confidence 689999999999999999999999999976655
Q ss_pred cCccccccccCCCCCccccccCCccccccCceecccccccccCCceeeeeEeecCceEEEEEcCCCCCCCCCcceEEEec
Q psy6236 183 KLQTPIAYQKDTDPNVIPIQKDGMAVCEKCGAMGVKHAFYTRERRFCSLAQVLNDRFMMIRVNSYDEDTNGGLDWFCYHM 262 (358)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~Gmk~~~~~~~~~~atv~~v~~~~~~~v~~D~~~~~~~~~~d~~~~h~ 262 (358)
|+|+||||+. .+|||| +.
T Consensus 44 ---------------------------------------------------------l~v~fDGw~~----~~D~W~-~~ 61 (107)
T 1wjq_A 44 ---------------------------------------------------------VKVHFDGWNN----CYDYWI-DA 61 (107)
T ss_dssp ---------------------------------------------------------EEEECSSSCG----GGCEEE-CT
T ss_pred ---------------------------------------------------------EEEEeCCCCC----cCCEEE-EC
Confidence 4555556654 588997 99
Q ss_pred CCCCcccchhhhhcCCCCCCCCCCccc
Q psy6236 263 SSPYIFAPGFCAAHGINLTPPKGYTHA 289 (358)
Q Consensus 263 ~Sp~I~PvGwc~~~g~~L~pP~gy~~~ 289 (358)
+|++|||||||+++|++|+||.+|...
T Consensus 62 dSpdIhPVGWc~~~g~~LqpP~~~~~~ 88 (107)
T 1wjq_A 62 DSPDIHPVGWCSKTGHPLQPPLSPLEL 88 (107)
T ss_dssp TCSSCEETTHHHHHTCCCBCCSCTTTT
T ss_pred CCCCcccCcHHHhcCCCCCCCCCcCcc
Confidence 999999999999999999999999843
No 17
>1wjr_A KIAA1617 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=99.94 E-value=1.4e-27 Score=200.97 Aligned_cols=89 Identities=18% Similarity=0.199 Sum_probs=79.0
Q ss_pred CEEEEecCCCCCCEEEEEEEEEeCCeEEEEEeC--C--CCCEEEeCCCCCeeccchhhhcCccccCCCCCCcc--ccccc
Q psy6236 1 MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYD--D--DDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDR--CAKGI 74 (358)
Q Consensus 1 MkLE~id~~~~~~~~vAtV~~v~G~rl~l~~~~--~--~~dfW~~~~S~~IhPVGWc~~ng~~L~pP~~y~~~--~~~~~ 74 (358)
|||||+|+++++.||||||++|+|+||+|||+| + ++||||+++|++|||||||+++|+.|+||.+|... .+.|.
T Consensus 16 mKLEa~D~~~p~~~~vAtV~~v~g~rl~l~~dG~~~~~~~D~W~~~~s~~I~PvGWc~~~g~~L~pP~~~~~~~~~~~W~ 95 (127)
T 1wjr_A 16 SLIELQDSQNPFQYWIVSVIENVGGRLRLRYVGLEDTESYDQWLFYLDYRLRPVGWCQENKYRMDPPSEIYPLKMASEWK 95 (127)
T ss_dssp CEEEEECSSCSSCEEEEECCCEETTEEEECBTTCSSCCSSCEEEETTCSSCBCTTTHHHHCCCBCCCTTTTTTSCHHHHH
T ss_pred CEeEEecCCCCCcEEEEEEeeeeCCEEEEEecCCCCCCCCCEeEeCCCCCccccCcHHhhCCccCCcccccCCCCcCCHH
Confidence 999999999999999999999999999999986 3 68999999999999999999999999999999853 35562
Q ss_pred -------cCc--cchhhhcCCCCc
Q psy6236 75 -------RDR--DDATEDLFPLSV 89 (358)
Q Consensus 75 -------~~~--~~ap~~lF~~~~ 89 (358)
.++ ..||.++|+...
T Consensus 96 ~yL~~~l~~a~~~~~P~~lFk~~~ 119 (127)
T 1wjr_A 96 CTLEKSLIDAAKFPLPMEVFKDHA 119 (127)
T ss_dssp HHHHHHHHHHHHSCCCGGGGCCCC
T ss_pred HHHHHHhcccccccCCHHHhCCCC
Confidence 233 678999998764
No 18
>1wjq_A KIAA1798 protein; MBT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.9.3
Probab=99.93 E-value=1.1e-26 Score=189.01 Aligned_cols=70 Identities=37% Similarity=0.609 Sum_probs=67.3
Q ss_pred CEEEEecCCCCCCEEEEEEEEEeCCeEEEEEeC--CCCCEEEeCCCCCeeccchhhhcCccccCCCCCCccc
Q psy6236 1 MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYD--DDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRC 70 (358)
Q Consensus 1 MkLE~id~~~~~~~~vAtV~~v~G~rl~l~~~~--~~~dfW~~~~S~~IhPVGWc~~ng~~L~pP~~y~~~~ 70 (358)
|||||+|++|++.+|||||++|.|+||+|||+| +.+|||||++|++|||||||+++|+.|+||.+|.+..
T Consensus 18 MKLEAvD~~~p~~icvATV~~v~g~rl~v~fDGw~~~~D~W~~~dSpdIhPVGWc~~~g~~LqpP~~~~~~~ 89 (107)
T 1wjq_A 18 MKLEVVDKRNPMFIRVATVADTDDHRVKVHFDGWNNCYDYWIDADSPDIHPVGWCSKTGHPLQPPLSPLELM 89 (107)
T ss_dssp CEEEEECTTCTTCEEEEEEEEECSSCEEEECSSSCGGGCEEECTTCSSCEETTHHHHHTCCCBCCSCTTTTC
T ss_pred CEEEEEcCCCCCcEEeEEEEEecCCEEEEEeCCCCCcCCEEEECCCCCcccCcHHHhcCCCCCCCCCcCccc
Confidence 999999999999999999999999999999986 6799999999999999999999999999999998764
No 19
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=99.74 E-value=3.5e-18 Score=134.86 Aligned_cols=38 Identities=13% Similarity=0.069 Sum_probs=32.9
Q ss_pred EEEEEcCCCCCCCCCcceEEEecCCCCcccchhhhhcCCCCCC
Q psy6236 240 MMIRVNSYDEDTNGGLDWFCYHMSSPYIFAPGFCAAHGINLTP 282 (358)
Q Consensus 240 ~~v~~D~~~~~~~~~~d~~~~h~~Sp~I~PvGwc~~~g~~L~p 282 (358)
++||||||+. .+|+|| ..+|+.|||+|||...+..|+.
T Consensus 50 v~VHfdGW~~----~yDeWv-~~dS~~I~P~g~~~~~~~~l~~ 87 (88)
T 2eqm_A 50 MLVHFERWSH----RYDEWI-YWDSNRLRPLERPALRKEGLKD 87 (88)
T ss_dssp EEEEESSSTT----TEEEEE-ETTSCCEECCCCCCTTCTTCCC
T ss_pred EEEEECCCCC----cccEEe-eCCCCcEeccccccccccccCC
Confidence 5677777765 689998 8999999999999999999874
No 20
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=99.70 E-value=3.8e-17 Score=123.42 Aligned_cols=32 Identities=28% Similarity=0.320 Sum_probs=28.2
Q ss_pred CCCCCCCCCCCCcEEEEecCCCCCCeEEEEEEEe
Q psy6236 98 PGTGQTGGFVVGMKLESVDPLNLSDICVATVMKM 131 (358)
Q Consensus 98 p~~~~~~~F~vGmKLEavD~~np~~icvATV~~v 131 (358)
|.....++|++||||||+|+++|. |+|||++|
T Consensus 5 p~~~~~~~F~vGmkLEa~d~~~p~--~~AtV~~v 36 (69)
T 3sd4_A 5 PPNRRGISFEVGAQLEARDRLKNW--YPAHIEDI 36 (69)
T ss_dssp CCCCTTCCCSTTCEEEEECTTSCE--EEEEEEEE
T ss_pred CCCCCCCCcCCCCEEEEEECCCCc--cccEEEEE
Confidence 444568899999999999999997 99999995
No 21
>2eqm_A PHD finger protein 20-like 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2jtf_A
Probab=99.67 E-value=4.1e-17 Score=128.73 Aligned_cols=62 Identities=13% Similarity=0.011 Sum_probs=59.2
Q ss_pred CEEEEecCCCCCCEEEEEEEEEeCCeEEEEEeC--CCCCEEEeCCCCCeeccchhhhcCccccC
Q psy6236 1 MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYD--DDDGFCCHQDSPLIHPVGWARRTGHLISA 62 (358)
Q Consensus 1 MkLE~id~~~~~~~~vAtV~~v~G~rl~l~~~~--~~~dfW~~~~S~~IhPVGWc~~ng~~L~p 62 (358)
|||||+|+.++..+|+|+|+++.|++|+|||+| +.+||||+++|++|||+|||+..+..|+.
T Consensus 24 mkLEA~D~~~~~~~a~i~~v~~~~~~v~VHfdGW~~~yDeWv~~dS~~I~P~g~~~~~~~~l~~ 87 (88)
T 2eqm_A 24 ARLEALDYLQKWYPSRIEKIDYEEGKMLVHFERWSHRYDEWIYWDSNRLRPLERPALRKEGLKD 87 (88)
T ss_dssp CEEEEECTTSCEEEEEEEEEETTTTEEEEEESSSTTTEEEEEETTSCCEECCCCCCTTCTTCCC
T ss_pred CEEEEEcCCCCeeEEEEEEEeccCCEEEEEECCCCCcccEEeeCCCCcEeccccccccccccCC
Confidence 999999999999999999999999999999987 78999999999999999999999999874
No 22
>3sd4_A PHD finger protein 20; tudor domain, transcription; 1.93A {Homo sapiens} PDB: 3q1j_A
Probab=99.53 E-value=7.3e-15 Score=110.82 Aligned_cols=48 Identities=25% Similarity=0.306 Sum_probs=45.7
Q ss_pred CEEEEecCCCCCCEEEEEEEEE--eCCeEEEEEeC--CCCCEEEeCCCCCeecc
Q psy6236 1 MNLEVVDKKRISQVKVATIEKI--VGKRLQVHYYD--DDDGFCCHQDSPLIHPV 50 (358)
Q Consensus 1 MkLE~id~~~~~~~~vAtV~~v--~G~rl~l~~~~--~~~dfW~~~~S~~IhPV 50 (358)
|||||+|+.++. |+|||++| .|+|++|||+| +.+||||+++|++||||
T Consensus 17 mkLEa~d~~~p~--~~AtV~~v~~~~~~~~VhfdGw~~~~D~W~~~dS~~i~Pv 68 (69)
T 3sd4_A 17 AQLEARDRLKNW--YPAHIEDIDYEEGKVLIHFKRWNHRYDEWFCWDSPYLRPL 68 (69)
T ss_dssp CEEEEECTTSCE--EEEEEEEEETTTTEEEEEETTSCGGGCEEEETTCTTEECC
T ss_pred CEEEEEECCCCc--cccEEEEEeccCCEEEEEeCCCCCCCCEEEcCCCCCeeEC
Confidence 999999999997 99999998 89999999987 67999999999999998
No 23
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=96.79 E-value=0.011 Score=49.11 Aligned_cols=94 Identities=14% Similarity=0.154 Sum_probs=62.2
Q ss_pred CEEEEecCCCCCCEEEEEEEEEeCCeEEEEEeCCCCCEEEeCCCCCeeccchhhhcCccccCCCCCCccccccccCccch
Q psy6236 1 MNLEVVDKKRISQVKVATIEKIVGKRLQVHYYDDDDGFCCHQDSPLIHPVGWARRTGHLISAPPLYTDRCAKGIRDRDDA 80 (358)
Q Consensus 1 MkLE~id~~~~~~~~vAtV~~v~G~rl~l~~~~~~~dfW~~~~S~~IhPVGWc~~ng~~L~pP~~y~~~~~~~~~~~~~a 80 (358)
|.+|+-+.. +.+.-|+|.++...-++|.|+++ |- -....|. . .+++|
T Consensus 6 ~~VEV~~~~--G~~y~a~V~~v~~d~~~V~f~n~----w~---~~~~vp~-----~--~vRlp----------------- 52 (128)
T 3h8z_A 6 LPVEVRGSN--GAFYKGFVKDVHEDSVTIFFENN----WQ---SERQIPF-----G--DVRLP----------------- 52 (128)
T ss_dssp CEEEEECTT--SCEEEEEEEEECSSEEEEEETTC----TT---CCEEEEG-----G--GEECC-----------------
T ss_pred cEEEEecCC--CCEEEEEEEEEeCCcEEEEEccc----cC---cceEech-----h--hEEcC-----------------
Confidence 678999843 78999999999888999999532 00 0001110 0 00000
Q ss_pred hhhcCCCCcCCCCCCCCCCCCCCCCCCCCcEEEEecCC---CCCCeEEEEEEEecceeeEEeeccee
Q psy6236 81 TEDLFPLSVGTAGTKLSPGTGQTGGFVVGMKLESVDPL---NLSDICVATVMKMEGYMMLEELDEGM 144 (358)
Q Consensus 81 p~~lF~~~~~~~~~~~~p~~~~~~~F~vGmKLEavD~~---np~~icvATV~~v~G~~l~~~~d~w~ 144 (358)
|.......|.+|+++|+-..- +|..=|.|+|+++.|....+++++|-
T Consensus 53 -----------------P~~~~~~~f~~gd~VEV~~~~~d~ep~gWw~a~I~~~kg~f~~V~y~~~~ 102 (128)
T 3h8z_A 53 -----------------PPADYNKEITEGDEVEVYSRANEQEPCGWWLARVRMMKGDFYVIEYAACD 102 (128)
T ss_dssp -----------------CCC----CCCTTCEEEEEECC---CCCEEEEEEEEEEETTEEEEEETTC-
T ss_pred -----------------CCcccccCCCCCCEEEEEecCCCCCcCccEEEEEEEeeCCEEEEEEcCCC
Confidence 001123479999999998765 45567899999999999999998763
No 24
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=95.89 E-value=0.063 Score=44.56 Aligned_cols=39 Identities=3% Similarity=-0.033 Sum_probs=32.0
Q ss_pred CCCCCCCeeeeecCCCCCCcc---eeEEEeEecceEEEEeCC
Q psy6236 317 EALLTLTKEKCFDLTGGKAGP---SIKIAHLITCLNKIVQNP 355 (358)
Q Consensus 317 ~~F~~gmkLEavd~~~p~~ic---vAtV~~v~g~~~~i~~~~ 355 (358)
..|.+|+++|+-...|....| .|+|+.++|.+..|.|+-
T Consensus 59 ~~f~~gd~VEV~~~~~d~ep~gWw~a~I~~~kg~f~~V~y~~ 100 (128)
T 3h8z_A 59 KEITEGDEVEVYSRANEQEPCGWWLARVRMMKGDFYVIEYAA 100 (128)
T ss_dssp -CCCTTCEEEEEECC---CCCEEEEEEEEEEETTEEEEEETT
T ss_pred cCCCCCCEEEEEecCCCCCcCccEEEEEEEeeCCEEEEEEcC
Confidence 469999999999998777777 899999999999999764
No 25
>2w0t_A Lethal(3)malignant brain tumor-like 2 protein; zinc, YACG, LMBL2, nucleus, zinc-finger, RNA binding, MBT repeats, PCG proteins, polymorphism; NMR {Homo sapiens}
Probab=85.67 E-value=0.2 Score=33.44 Aligned_cols=31 Identities=42% Similarity=1.011 Sum_probs=27.0
Q ss_pred ccCCccccccCceecccccccccCCceeeee
Q psy6236 202 QKDGMAVCEKCGAMGVKHAFYTRERRFCSLA 232 (358)
Q Consensus 202 ~k~~~~~~~~~~~~Gmk~~~~~~~~~~atv~ 232 (358)
.++.++.|+.|+++|.+..++.++.|||+++
T Consensus 2 ~~~~~~~CE~CG~~g~~~~F~~ksKRFCS~~ 32 (43)
T 2w0t_A 2 SGSEPAVCEMCGIVGTREAFFSKTKRFCSVS 32 (43)
T ss_dssp CSCCEEECTTTCCEEETTTSCTTTSSSSSHH
T ss_pred CCCceehhhhhcCcchhhhhccCCcceechh
Confidence 3567889999999999999999999998753
No 26
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=82.58 E-value=2.9 Score=33.13 Aligned_cols=39 Identities=10% Similarity=0.008 Sum_probs=28.9
Q ss_pred CCCCCCCCcEEEEecCCCCCCeEEEEEEEec----ceeeEEeecce
Q psy6236 102 QTGGFVVGMKLESVDPLNLSDICVATVMKME----GYMMLEELDEG 143 (358)
Q Consensus 102 ~~~~F~vGmKLEavD~~np~~icvATV~~v~----G~~l~~~~d~w 143 (358)
....|.+|.++.+.+ ...+..|.|+++. +..-.|||.||
T Consensus 19 ~~~~f~vGekVl~~~---~~~~YeAkIl~v~~~~~~~~Y~VHY~Gw 61 (102)
T 2f5k_A 19 PKPKFQEGERVLCFH---GPLLYEAKCVKVAIKDKQVKYFIHYSGW 61 (102)
T ss_dssp CSCSCCTTCEEEEES---SSSEEEEEEEEEEEETTEEEEEEEETTS
T ss_pred CCcccCCCCEEEEEE---CCEEEEEEEEEEEEcCCCcEEEEEeCCc
Confidence 345799999999988 3679999999976 23444555544
No 27
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=73.84 E-value=6 Score=29.51 Aligned_cols=38 Identities=21% Similarity=0.216 Sum_probs=28.6
Q ss_pred EecCCCCCCEEEEEEEEEe--CCeEEEEEeCCCCCEEEeCC
Q psy6236 5 VVDKKRISQVKVATIEKIV--GKRLQVHYYDDDDGFCCHQD 43 (358)
Q Consensus 5 ~id~~~~~~~~vAtV~~v~--G~rl~l~~~~~~~dfW~~~~ 43 (358)
|+-..+-+.+..+||++|- +.+.+|+|+| +..||+...
T Consensus 33 VLarwsDGlfYLGTI~kV~~~~e~ClV~F~D-~S~~W~~~k 72 (79)
T 2m0o_A 33 VLARWTDGLLYLGTIKKVDSAREVCLVQFED-DSQFLVLWK 72 (79)
T ss_dssp EEBCCTTSCCCEEEEEEEETTTTEEEEEETT-SCEEEEETT
T ss_pred EEEEecCCCEEeEEEEEeccCCCEEEEEEcC-CCeEEEEee
Confidence 3444556789999999998 5678899854 447999864
No 28
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=71.40 E-value=6.3 Score=28.79 Aligned_cols=34 Identities=15% Similarity=0.229 Sum_probs=27.3
Q ss_pred CCCCCEEEEEEEEEeCCeEEEEEeCCCCCEEEeCC
Q psy6236 9 KRISQVKVATIEKIVGKRLQVHYYDDDDGFCCHQD 43 (358)
Q Consensus 9 ~~~~~~~vAtV~~v~G~rl~l~~~~~~~dfW~~~~ 43 (358)
-+-+.+..+||++..-++.+|+|+| +..|||.-.
T Consensus 26 w~DG~fYLGtIVd~~~~~ClV~FeD-~S~~Wv~~k 59 (69)
T 2xk0_A 26 CNDGRFYLGTIIDQTSDQYLIRFDD-QSEQWCEPD 59 (69)
T ss_dssp CTTSCEEEEEEEEECSSCEEEEETT-CCEEEECTT
T ss_pred ecCCCEEEEEEEecCCceEEEEecC-CcceeeeHH
Confidence 4447899999999999999999965 447998753
No 29
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.68 E-value=10 Score=29.03 Aligned_cols=31 Identities=16% Similarity=0.299 Sum_probs=24.9
Q ss_pred CCCCCCCcEEEEecCC--CCCCeEEEEEEEecc
Q psy6236 103 TGGFVVGMKLESVDPL--NLSDICVATVMKMEG 133 (358)
Q Consensus 103 ~~~F~vGmKLEavD~~--np~~icvATV~~v~G 133 (358)
...|++|.|+.+.... ....+..|+|.++..
T Consensus 7 ~~~~~vG~kv~v~~~~~~~~~~~y~AkIl~i~~ 39 (87)
T 2eko_A 7 GGEIIEGCRLPVLRRNQDNEDEWPLAEILSVKD 39 (87)
T ss_dssp SCSCCTTCEEEBCEECTTCCEECCEEEEEEECC
T ss_pred cccccCCCEEEEEEcccCCCCeEEEEEEEEEEE
Confidence 5679999999998753 445789999999754
No 30
>2lcc_A AT-rich interactive domain-containing protein 4A; chromobarrel domain, RBBP1, transcription; NMR {Homo sapiens}
Probab=56.04 E-value=13 Score=27.61 Aligned_cols=41 Identities=15% Similarity=0.026 Sum_probs=28.1
Q ss_pred CCCCCCCcEEEEecCCC-CCCeEEEEEEEecc----eeeEEeecce
Q psy6236 103 TGGFVVGMKLESVDPLN-LSDICVATVMKMEG----YMMLEELDEG 143 (358)
Q Consensus 103 ~~~F~vGmKLEavD~~n-p~~icvATV~~v~G----~~l~~~~d~w 143 (358)
...|.+|.|+.+....+ ...+..|.|+++.. ..-.|||.||
T Consensus 3 ~~~~~vGekV~~~~~d~k~~~~y~AkIl~i~~~~~~~~Y~VHY~gw 48 (76)
T 2lcc_A 3 MEPCLTGTKVKVKYGRGKTQKIYEASIKSTEIDDGEVLYLVHYYGW 48 (76)
T ss_dssp CCCSSTTCEEEEEEEETTEEEEEEEEEEEEEEETTEEEEEEEETTS
T ss_pred ccccCCCCEEEEEeCCCCCCCEEEEEEEEEEccCCceEEEEEeCCc
Confidence 45799999999987631 24789999998753 1234555543
No 31
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=51.76 E-value=20 Score=30.69 Aligned_cols=34 Identities=12% Similarity=0.138 Sum_probs=27.2
Q ss_pred CCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEee
Q psy6236 104 GGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEEL 140 (358)
Q Consensus 104 ~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~ 140 (358)
...++||.+++.++.- . .+++|+++.+..+.+-+
T Consensus 88 ~~~~~G~~~~~~~~~G--~-~~~~V~~v~~~~V~vD~ 121 (171)
T 2k8i_A 88 DELQVGMRFLAETDQG--P-VPVEITAVEDDHVVVDG 121 (171)
T ss_dssp SCCCTTCEEEEEETTE--E-EEEEEEEECSSEEEEES
T ss_pred cCccCCcEEEEECCCC--c-EEEEEEEEcCCEEEEeC
Confidence 3588999999988765 2 59999999988877544
No 32
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.73 E-value=17 Score=25.92 Aligned_cols=34 Identities=9% Similarity=0.116 Sum_probs=25.2
Q ss_pred CCCCCCEEEEEEEEEe--CCeEEEEEeCCCCCEEEeC
Q psy6236 8 KKRISQVKVATIEKIV--GKRLQVHYYDDDDGFCCHQ 42 (358)
Q Consensus 8 ~~~~~~~~vAtV~~v~--G~rl~l~~~~~~~dfW~~~ 42 (358)
.-.-..+.++||++|- +.+-+|+|.| +..||.+-
T Consensus 17 rWsDGlfYlgtV~kV~~~~~~ClV~FeD-~s~~wv~~ 52 (63)
T 2e5q_A 17 RWTDGLYYLGKIKRVSSSKQSCLVTFED-NSKYWVLW 52 (63)
T ss_dssp ECTTSCEEEEEECCCCSTTSEEEEEETT-SCEEEEEG
T ss_pred EecCCCEEEEEEEEEecCCCEEEEEEcc-CceeEEEe
Confidence 3345689999999999 4568888854 44788864
No 33
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=51.34 E-value=29 Score=25.10 Aligned_cols=35 Identities=20% Similarity=0.201 Sum_probs=25.9
Q ss_pred CCCCCCEEEEEEEEEeC--CeEEEEEeCCCCCEEEeCC
Q psy6236 8 KKRISQVKVATIEKIVG--KRLQVHYYDDDDGFCCHQD 43 (358)
Q Consensus 8 ~~~~~~~~vAtV~~v~G--~rl~l~~~~~~~dfW~~~~ 43 (358)
...-..+..+||.+|-. .+-+|+|.| +..||....
T Consensus 19 rWsDGlfYlGtV~kV~~~~~~ClV~FeD-~s~~wv~~k 55 (68)
T 2e5p_A 19 RWTDGLLYLGTIKKVDSAREVCLVQFED-DSQFLVLWK 55 (68)
T ss_dssp ECTTSSEEEEEEEEEETTTTEEEEEETT-TEEEEEETT
T ss_pred EecCCcEEEeEEEEEecCCcEEEEEEcc-CCeeeeeee
Confidence 34447899999999994 468888854 446898763
No 34
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=50.96 E-value=14 Score=32.48 Aligned_cols=33 Identities=12% Similarity=0.122 Sum_probs=26.2
Q ss_pred CCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEee
Q psy6236 105 GFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEEL 140 (358)
Q Consensus 105 ~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~ 140 (358)
.+++||.+++.++.- ..+++|++|.+..+.+.|
T Consensus 89 ~~~~G~~~~~~~~~G---~~~~~V~~v~~~~V~vD~ 121 (196)
T 2kfw_A 89 ELQVGMRFLAETDQG---PVPVEITAVEDDHVVVDG 121 (196)
T ss_dssp CCCTTCEEEEEETTE---EEEEEBCCCCSSSEEECC
T ss_pred CcccCCEEEEECCCC---cEEEEEEEEcCCEEEEeC
Confidence 588999999987764 578999999887777543
No 35
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=49.60 E-value=30 Score=28.38 Aligned_cols=28 Identities=18% Similarity=0.085 Sum_probs=23.2
Q ss_pred CCCCCCCcEEEEecCCCCCCeEEEEEEEec
Q psy6236 103 TGGFVVGMKLESVDPLNLSDICVATVMKME 132 (358)
Q Consensus 103 ~~~F~vGmKLEavD~~np~~icvATV~~v~ 132 (358)
...|.+|.++-+.+. ...+..|+|+++.
T Consensus 10 ~~~~~vGe~v~~~~~--d~~~y~AkIl~i~ 37 (133)
T 1wgs_A 10 EVTVEIGETYLCRRP--DSTWHSAEVIQSR 37 (133)
T ss_dssp CCCCCTTSEEEEEET--TTEEEEEEEEEEE
T ss_pred ccccCCCCEEEEEeC--CCCEEEEEEEEEE
Confidence 457999999999975 3479999999865
No 36
>3oa6_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3ob9_A*
Probab=48.90 E-value=19 Score=28.71 Aligned_cols=32 Identities=19% Similarity=0.184 Sum_probs=24.1
Q ss_pred CCCCCCCCCcEEEEecCCC--CCCeEEEEEEEec
Q psy6236 101 GQTGGFVVGMKLESVDPLN--LSDICVATVMKME 132 (358)
Q Consensus 101 ~~~~~F~vGmKLEavD~~n--p~~icvATV~~v~ 132 (358)
+..-.|.+|.|+=+-.+-. ..+|.-|.|+++.
T Consensus 15 ~~k~~F~~gEkVLc~h~d~~kg~llYeAKIl~v~ 48 (110)
T 3oa6_A 15 GMKFKFHSGEKVLCFEPDPTKARVLYDAKIVDVI 48 (110)
T ss_dssp ---CCSCTTCEEEEECSCTTSCCCEEEEEEEEEE
T ss_pred CCCcccCCCCEEEEEecCCCCCcccEEEEEEEEE
Confidence 3456899999999977665 4589999999873
No 37
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=48.60 E-value=51 Score=23.19 Aligned_cols=35 Identities=20% Similarity=0.186 Sum_probs=26.2
Q ss_pred CCCCCCEEEEEEEEEeCC--eEEEEEeCCCCCEEEeCC
Q psy6236 8 KKRISQVKVATIEKIVGK--RLQVHYYDDDDGFCCHQD 43 (358)
Q Consensus 8 ~~~~~~~~vAtV~~v~G~--rl~l~~~~~~~dfW~~~~ 43 (358)
.-.-..+.++||++|-.. +.+|+|+| ...||+.-.
T Consensus 13 rwsDG~fYlGtI~~V~~~~~~clV~F~D-~s~~W~~~k 49 (58)
T 4hcz_A 13 RWTDGLLYLGTIKKVDSAREVCLVQFED-DSQFLVLWK 49 (58)
T ss_dssp ECTTSCEEEEEEEEEETTTTEEEEEETT-SCEEEEEGG
T ss_pred EecCCCEEeEEEEEEecCCCEEEEEEcC-CCeEEEEhH
Confidence 344578999999998855 78888865 347998753
No 38
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=48.00 E-value=25 Score=29.52 Aligned_cols=35 Identities=20% Similarity=0.198 Sum_probs=27.4
Q ss_pred CCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEee
Q psy6236 104 GGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEEL 140 (358)
Q Consensus 104 ~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~ 140 (358)
...++||.+++.++.. ...+++|+++.|..+.+.+
T Consensus 83 ~~~~~G~~~~~~~~~G--~~~~~~V~~v~~~~v~vD~ 117 (158)
T 3cgm_A 83 AEVVPGAQFYAQDMEG--NPMPLTVVAVEGEEVTVDF 117 (158)
T ss_dssp SCCCTTCEEEEEETTT--EEEEEEEEEEETTEEEEEC
T ss_pred CCCccCCEEEEECCCC--CEEEEEEEEECCCEEEEeC
Confidence 3688999999987653 5678999999988777544
No 39
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=47.47 E-value=32 Score=29.30 Aligned_cols=34 Identities=6% Similarity=-0.004 Sum_probs=27.0
Q ss_pred CCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEee
Q psy6236 105 GFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEEL 140 (358)
Q Consensus 105 ~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~ 140 (358)
..++||.+++.++. ..-.+++|+++.+..+.+-+
T Consensus 112 ~~~~G~~~~~~~~~--G~~~~~~V~~v~~~~V~vD~ 145 (169)
T 4dt4_A 112 EPEIGAIMLFTAMD--GSEMPGVIREINGDSITVDF 145 (169)
T ss_dssp CCCTTCEEEEECTT--SCEEEEEEEEEETTEEEEEC
T ss_pred CCCCCcEEEEECCC--CCEEEEEEEEEcCCEEEEeC
Confidence 47899999998764 35678999999988777544
No 40
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=44.91 E-value=65 Score=23.61 Aligned_cols=39 Identities=10% Similarity=0.005 Sum_probs=31.2
Q ss_pred CCCCCCCcEEEEecCCCCCCeEEEEEEEecc-eeeEEeecce
Q psy6236 103 TGGFVVGMKLESVDPLNLSDICVATVMKMEG-YMMLEELDEG 143 (358)
Q Consensus 103 ~~~F~vGmKLEavD~~np~~icvATV~~v~G-~~l~~~~d~w 143 (358)
...|++|.++.|.=. -.....|+|.++.+ ....|.|+.+
T Consensus 7 ~~~~kvGd~clA~ws--Dg~~Y~A~I~~v~~~~~~~V~f~Dy 46 (74)
T 2equ_A 7 GFDFKAGEEVLARWT--DCRYYPAKIEAINKEGTFTVQFYDG 46 (74)
T ss_dssp CCCCCTTCEEEEECS--SSSEEEEEEEEESTTSSEEEEETTS
T ss_pred CCCCCCCCEEEEECC--CCCEEEEEEEEECCCCEEEEEEecC
Confidence 457999999999954 46899999999976 5566777654
No 41
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=44.71 E-value=47 Score=25.49 Aligned_cols=45 Identities=7% Similarity=0.071 Sum_probs=30.0
Q ss_pred CCCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEeecceeeccCCCCcccc
Q psy6236 103 TGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGMSKI 155 (358)
Q Consensus 103 ~~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~d~w~~~~sp~gwa~~ 155 (358)
...|.+|.|+-+.. ...+..|+|+++.-. -..+.||.+..||-++
T Consensus 21 ~~~~~vG~kv~v~~---~~~~y~AkIl~ir~~-----~~~~~YyVHY~g~NkR 65 (92)
T 2ro0_A 21 VDDIIIKCQCWVQK---NDEERLAEILSINTR-----KAPPKFYVHYVNYNKR 65 (92)
T ss_dssp TTSCCTTCEEEEEE---TTEEEEEEEEEEECS-----SSSCEEEEEETTSCTT
T ss_pred cccccCCCEEEEEE---CCEEEEEEEEEEEEc-----CCCcEEEEEeCCcCcc
Confidence 46799999999985 458999999987531 1134455555455333
No 42
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=43.97 E-value=76 Score=24.78 Aligned_cols=42 Identities=14% Similarity=0.108 Sum_probs=30.0
Q ss_pred CCCCCCCCcEEEEecC--CCCCCeEEEEEEEecc---------eeeEEeecce
Q psy6236 102 QTGGFVVGMKLESVDP--LNLSDICVATVMKMEG---------YMMLEELDEG 143 (358)
Q Consensus 102 ~~~~F~vGmKLEavD~--~np~~icvATV~~v~G---------~~l~~~~d~w 143 (358)
....|.+|.++-+..+ -.-.++.-|.|+++.. ..-.|||.||
T Consensus 16 ~~~~f~~GEkVLc~h~d~~kg~~lYeAKIl~v~~~~~~~~~~~~~Y~VHY~GW 68 (101)
T 3m9q_A 16 ETPLFHKGEIVLCYEPDKSKARVLYTSKVLNVFERRNEHGLRFYEYKIHFQGW 68 (101)
T ss_dssp CCCCCCTTCEEEEECCCTTSCCCEEEEEEEEEEEEECTTSCEEEEEEEEETTS
T ss_pred CCCcccCCCEEEEEecCCCCCCcceEeEEEEEEecCCccccCceEEEEEeCCC
Confidence 3567999999999763 3345799999999853 2344666665
No 43
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=40.02 E-value=15 Score=32.12 Aligned_cols=63 Identities=11% Similarity=0.076 Sum_probs=42.2
Q ss_pred CCCCCCCCCcccccCHhHHHhhcCCCCCCccccCCCCCCCCCCCCCeeeeecCCCCCCcceeEEEeEecceEEEEeC
Q psy6236 278 INLTPPKGYTHATFSWEQYCRDTNSIPAPPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQN 354 (358)
Q Consensus 278 ~~L~pP~gy~~~~F~W~~YL~~~~a~~aP~~~F~~~~~~~~F~~gmkLEavd~~~p~~icvAtV~~v~g~~~~i~~~ 354 (358)
+.+.|+.+|-... ...-...|.+.|... ...++||.+++.+... ..+++|++|.+..+.|.||
T Consensus 60 v~Ippe~aYGe~~--------~~lV~~vp~~~f~~~---~~~~~G~~~~~~~~~G---~~~~~V~~v~~~~V~vD~N 122 (196)
T 2kfw_A 60 VAVGANDAYGQYD--------ENLVQRVPKDVFMGV---DELQVGMRFLAETDQG---PVPVEITAVEDDHVVVDGN 122 (196)
T ss_dssp EECSTTTTSSCCC--------TTTCEEECGGGCCCS---SCCCTTCEEEEEETTE---EEEEEBCCCCSSSEEECCC
T ss_pred EEeCcHHhcCCCC--------hhhEEEEEHHHCCCc---cCcccCCEEEEECCCC---cEEEEEEEEcCCEEEEeCC
Confidence 4566777775321 011223466666432 3589999999887654 4689999999999988776
No 44
>2eko_A Histone acetyltransferase htatip; chromo domain, histone tail, chromatin organization modifier, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=38.21 E-value=52 Score=25.00 Aligned_cols=53 Identities=17% Similarity=0.235 Sum_probs=37.4
Q ss_pred EEEEecC--CCCCCEEEEEEEEEeC----CeEEEEEeC--CCCCEEEeCCCCCeeccchhh
Q psy6236 2 NLEVVDK--KRISQVKVATIEKIVG----KRLQVHYYD--DDDGFCCHQDSPLIHPVGWAR 54 (358)
Q Consensus 2 kLE~id~--~~~~~~~vAtV~~v~G----~rl~l~~~~--~~~dfW~~~~S~~IhPVGWc~ 54 (358)
||.+..+ .....+..|+|+++-. ..+.|||.| ...|=|+..+.-++-.+-|-.
T Consensus 15 kv~v~~~~~~~~~~~y~AkIl~i~~~~~~~~YyVHY~g~NkRlDEWV~~~rl~~~~~~~p~ 75 (87)
T 2eko_A 15 RLPVLRRNQDNEDEWPLAEILSVKDISGRKLFYVHYIDFNRRLDEWVTHERLDLKKIQFPK 75 (87)
T ss_dssp EEEBCEECTTCCEECCEEEEEEECCSSSCCCEEEEECSSCSCCCEEECTTTBCGGGCCCCC
T ss_pred EEEEEEcccCCCCeEEEEEEEEEEEcCCCcEEEEEeCCCCcccccccCHhHcccccccCCC
Confidence 3444442 2344678899999874 369999986 678999999888776554443
No 45
>2lrq_A Protein MRG15, NUA4 complex subunit EAF3 homolog; epigenetics, LID complex, transcription; NMR {Drosophila melanogaster}
Probab=43.45 E-value=7.1 Score=29.72 Aligned_cols=45 Identities=27% Similarity=0.197 Sum_probs=29.3
Q ss_pred CCCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEeecceeeccCCCCcccc
Q psy6236 103 TGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGMSKI 155 (358)
Q Consensus 103 ~~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~d~w~~~~sp~gwa~~ 155 (358)
...|.+|.|+.+.+. ..+..|.|+++.-.. ..+.||.+..||.++
T Consensus 10 ~~~~~~Gekv~~~~~---~~~y~AkIl~i~~~~-----~~~~YyVHY~GwNkR 54 (85)
T 2lrq_A 10 NTLFVDGERVLCFHG---PLIYEAKVLKTKPDA-----TPVEYYIHYAGWSKN 54 (85)
Confidence 457999999999873 357999999875210 124455555555444
No 46
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=36.82 E-value=48 Score=23.95 Aligned_cols=32 Identities=16% Similarity=0.003 Sum_probs=24.1
Q ss_pred CCCCEEEEEEEEEeC--CeEEEEEeCCCCCEEEeC
Q psy6236 10 RISQVKVATIEKIVG--KRLQVHYYDDDDGFCCHQ 42 (358)
Q Consensus 10 ~~~~~~vAtV~~v~G--~rl~l~~~~~~~dfW~~~ 42 (358)
.-..+..|+|++|-. +.-+|+|+|+ ..||..-
T Consensus 25 tDGl~Y~gtI~~V~~~~gtC~V~F~D~-s~~w~~~ 58 (66)
T 2eqj_A 25 SDGLFYLGTIKKINILKQSCFIIFEDS-SKSWVLW 58 (66)
T ss_dssp TTSCEEEEEEEEEETTTTEEEEEETTT-EEEEEET
T ss_pred ccCcEEEeEEEEEccCCcEEEEEEccC-CEEEEEe
Confidence 345799999999996 5788888653 4688764
No 47
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=36.79 E-value=93 Score=22.43 Aligned_cols=37 Identities=8% Similarity=0.001 Sum_probs=30.2
Q ss_pred CCCCCCcEEEEecCCCCCCeEEEEEEEecc-eeeEEeecc
Q psy6236 104 GGFVVGMKLESVDPLNLSDICVATVMKMEG-YMMLEELDE 142 (358)
Q Consensus 104 ~~F~vGmKLEavD~~np~~icvATV~~v~G-~~l~~~~d~ 142 (358)
..|++|.++-|.= .-....+|+|+++.| ..-.+.|++
T Consensus 5 ~~~~vGd~vmArW--~D~~yYpA~I~si~~~~~Y~V~F~d 42 (67)
T 3p8d_A 5 SEFQINEQVLACW--SDCRFYPAKVTAVNKDGTYTVKFYD 42 (67)
T ss_dssp CCCCTTCEEEEEC--TTSCEEEEEEEEECTTSEEEEEETT
T ss_pred cccccCCEEEEEc--CCCCEeeEEEEEECCCCeEEEEEeC
Confidence 4799999999983 667999999999988 456667763
No 48
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=34.00 E-value=37 Score=28.13 Aligned_cols=42 Identities=10% Similarity=-0.082 Sum_probs=31.3
Q ss_pred CCccccCCCCCCCCCCCCCeeeeecCCCCCCcceeEEEeEecceEEEEeCC
Q psy6236 305 APPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQNP 355 (358)
Q Consensus 305 aP~~~F~~~~~~~~F~~gmkLEavd~~~p~~icvAtV~~v~g~~~~i~~~~ 355 (358)
.|...|... .-..++||.+++-+ .+++|++|.+..+.|.||.
T Consensus 92 v~~~~f~~~--~~~~~~G~~~~~~~-------~~~~V~~v~~~~v~vD~NH 133 (151)
T 1ix5_A 92 IPRDAFKEA--DFEPEEGMVILAEG-------IPATITEVTDNEVTLDFNH 133 (151)
T ss_dssp EETHHHHTS--TTCCCTTEEEESSS-------CEEEEEEEETTEEEEECCC
T ss_pred EEHHHcCcc--CCcccccCEEEECC-------eEEEEEEEcCCEEEEeCCC
Confidence 344455431 13588999999776 6899999999999998874
No 49
>2equ_A PHD finger protein 20-like 1; tudor domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=33.61 E-value=79 Score=23.13 Aligned_cols=38 Identities=8% Similarity=-0.236 Sum_probs=31.1
Q ss_pred CCCCCCCCeeeeecCCCCCCcceeEEEeEec-ceEEEEeCC
Q psy6236 316 GEALLTLTKEKCFDLTGGKAGPSIKIAHLIT-CLNKIVQNP 355 (358)
Q Consensus 316 ~~~F~~gmkLEavd~~~p~~icvAtV~~v~g-~~~~i~~~~ 355 (358)
...|++|.++.|.=- + .....|+|++|.+ +...|.|+-
T Consensus 7 ~~~~kvGd~clA~ws-D-g~~Y~A~I~~v~~~~~~~V~f~D 45 (74)
T 2equ_A 7 GFDFKAGEEVLARWT-D-CRYYPAKIEAINKEGTFTVQFYD 45 (74)
T ss_dssp CCCCCTTCEEEEECS-S-SSEEEEEEEEESTTSSEEEEETT
T ss_pred CCCCCCCCEEEEECC-C-CCEEEEEEEEECCCCEEEEEEec
Confidence 357999999999955 3 6889999999987 677888763
No 50
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=33.58 E-value=76 Score=24.06 Aligned_cols=38 Identities=3% Similarity=-0.216 Sum_probs=30.4
Q ss_pred CCCCCCCCeeeeecCCCCCCcceeEEEeEec-ceEEEEeCC
Q psy6236 316 GEALLTLTKEKCFDLTGGKAGPSIKIAHLIT-CLNKIVQNP 355 (358)
Q Consensus 316 ~~~F~~gmkLEavd~~~p~~icvAtV~~v~g-~~~~i~~~~ 355 (358)
...|++|.++.|-= .-..-.+|+|++|.+ +...|.|+-
T Consensus 19 ~~~f~vGd~VlArW--~D~~yYPAkI~sV~~~~~YtV~F~D 57 (85)
T 3qii_A 19 SSEFQINEQVLACW--SDCRFYPAKVTAVNKDGTYTVKFYD 57 (85)
T ss_dssp --CCCTTCEEEEEC--TTSCEEEEEEEEECTTSEEEEEETT
T ss_pred CcccccCCEEEEEe--CCCCEeeEEEEEECCCCeEEEEEeC
Confidence 46899999999987 446789999999998 577788775
No 51
>3qii_A PHD finger protein 20; tudor domain, structural genomics, structural GE consortium, SGC, transcription regulator; 2.30A {Homo sapiens}
Probab=32.93 E-value=1e+02 Score=23.31 Aligned_cols=37 Identities=8% Similarity=-0.010 Sum_probs=29.1
Q ss_pred CCCCCCCcEEEEecCCCCCCeEEEEEEEecc-eeeEEeec
Q psy6236 103 TGGFVVGMKLESVDPLNLSDICVATVMKMEG-YMMLEELD 141 (358)
Q Consensus 103 ~~~F~vGmKLEavD~~np~~icvATV~~v~G-~~l~~~~d 141 (358)
...|++|.++.|.= .-....+|+|+.+.| ..-.|.|+
T Consensus 19 ~~~f~vGd~VlArW--~D~~yYPAkI~sV~~~~~YtV~F~ 56 (85)
T 3qii_A 19 SSEFQINEQVLACW--SDCRFYPAKVTAVNKDGTYTVKFY 56 (85)
T ss_dssp --CCCTTCEEEEEC--TTSCEEEEEEEEECTTSEEEEEET
T ss_pred CcccccCCEEEEEe--CCCCEeeEEEEEECCCCeEEEEEe
Confidence 46799999999985 667899999999988 45556665
No 52
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=32.92 E-value=69 Score=27.20 Aligned_cols=45 Identities=9% Similarity=-0.161 Sum_probs=33.8
Q ss_pred CCccccCCCCCCCCCCCCCeeeeecCCCCCCcceeEEEeEecceEEEEeC
Q psy6236 305 APPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQN 354 (358)
Q Consensus 305 aP~~~F~~~~~~~~F~~gmkLEavd~~~p~~icvAtV~~v~g~~~~i~~~ 354 (358)
.|.+.|... ...++||.+++-++.. ...+++|++|.+..+.|-+|
T Consensus 102 vp~~~f~~~---~~~~~G~~~~~~~~~G--~~~~~~V~~v~~~~V~vD~N 146 (169)
T 4dt4_A 102 FSRREFMDA---GEPEIGAIMLFTAMDG--SEMPGVIREINGDSITVDFN 146 (169)
T ss_dssp EEGGGGTTT---CCCCTTCEEEEECTTS--CEEEEEEEEEETTEEEEECS
T ss_pred eCHHHCCCc---CCCCCCcEEEEECCCC--CEEEEEEEEEcCCEEEEeCC
Confidence 455556532 3578999999977543 34679999999999988776
No 53
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=32.32 E-value=62 Score=26.72 Aligned_cols=45 Identities=13% Similarity=-0.011 Sum_probs=34.3
Q ss_pred CCccccCCCCCCCCCCCCCeeeeecCCCCCCcceeEEEeEecceEEEEeCC
Q psy6236 305 APPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQNP 355 (358)
Q Consensus 305 aP~~~F~~~~~~~~F~~gmkLEavd~~~p~~icvAtV~~v~g~~~~i~~~~ 355 (358)
.|.+.| . ....++||.+++-+... ...+++|++|.+..+.|-+|.
T Consensus 84 v~~~~f-~---~~~~~~G~~~~~~~~~G--~~~~~~V~~v~~~~v~vD~NH 128 (151)
T 2kr7_A 84 VPRDQF-E---GIELEKGMSVFGQTEDN--QTIQAIIKDFSATHVMVDYNH 128 (151)
T ss_dssp EEGGGG-T---TSCCCTTCEEEEEETTT--EEEEEEEEEECSSEEEEEECC
T ss_pred EcHHHc-C---CCCCccCCEEEEECCCC--CEEEEEEEEECCCEEEEECCC
Confidence 455566 1 23689999999887755 345899999999999998874
No 54
>2l1t_A Uncharacterized protein; putative C-DI-GMP binding, GSU3033, PILZ, structural genomic biology, protein structure initiative; NMR {Geobacter sulfurreducens}
Probab=31.47 E-value=44 Score=26.57 Aligned_cols=37 Identities=16% Similarity=0.041 Sum_probs=29.1
Q ss_pred CCCCCCCeeeeecCCCCCC--cceeEEEeEecceEEEEe
Q psy6236 317 EALLTLTKEKCFDLTGGKA--GPSIKIAHLITCLNKIVQ 353 (358)
Q Consensus 317 ~~F~~gmkLEavd~~~p~~--icvAtV~~v~g~~~~i~~ 353 (358)
.-|++|||.|+-=+....- =-=|-|+++.+.+|+|.+
T Consensus 11 ~yF~~gqrv~V~ipL~~~~~F~dwAiIt~~~~dli~lqL 49 (109)
T 2l1t_A 11 RYFEQLQKVNLTVRLGDTGSFDGTAAITSLKGSLAWLEL 49 (109)
T ss_dssp GTCCTTCEEEEEEEETTTEEEEEEEEEEEEETTEEEECC
T ss_pred HhcCCCcEEEEEEEcCCCCeEcCceEEEEecCCEEEEEe
Confidence 5799999999876655432 234999999999999865
No 55
>3p8d_A Medulloblastoma antigen MU-MB-50.72; tudor domain, lysine-methylated P53 binding, histone binding binding; 2.00A {Homo sapiens}
Probab=31.15 E-value=1.1e+02 Score=21.99 Aligned_cols=36 Identities=3% Similarity=-0.234 Sum_probs=30.5
Q ss_pred CCCCCCeeeeecCCCCCCcceeEEEeEec-ceEEEEeCC
Q psy6236 318 ALLTLTKEKCFDLTGGKAGPSIKIAHLIT-CLNKIVQNP 355 (358)
Q Consensus 318 ~F~~gmkLEavd~~~p~~icvAtV~~v~g-~~~~i~~~~ 355 (358)
.|++|.++-|.= .-..-.+|+|++|.+ ....|.|+-
T Consensus 6 ~~~vGd~vmArW--~D~~yYpA~I~si~~~~~Y~V~F~d 42 (67)
T 3p8d_A 6 EFQINEQVLACW--SDCRFYPAKVTAVNKDGTYTVKFYD 42 (67)
T ss_dssp CCCTTCEEEEEC--TTSCEEEEEEEEECTTSEEEEEETT
T ss_pred ccccCCEEEEEc--CCCCEeeEEEEEECCCCeEEEEEeC
Confidence 699999999985 556889999999998 477888875
No 56
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=30.71 E-value=41 Score=28.59 Aligned_cols=44 Identities=14% Similarity=0.050 Sum_probs=34.4
Q ss_pred CCccccCCCCCCCCCCCCCeeeeecCCCCCCcceeEEEeEecceEEEEeC
Q psy6236 305 APPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQN 354 (358)
Q Consensus 305 aP~~~F~~~~~~~~F~~gmkLEavd~~~p~~icvAtV~~v~g~~~~i~~~ 354 (358)
.|.+.|.. ....++||.+++-++... .+++|++|.+..+.|-||
T Consensus 79 v~~~~f~~---~~~~~~G~~~~~~~~~G~---~~~~V~~v~~~~V~vD~N 122 (171)
T 2k8i_A 79 VPKDVFMG---VDELQVGMRFLAETDQGP---VPVEITAVEDDHVVVDGN 122 (171)
T ss_dssp EEGGGGTT---SSCCCTTCEEEEEETTEE---EEEEEEEECSSEEEEESC
T ss_pred eeHHHCCc---ccCccCCcEEEEECCCCc---EEEEEEEEcCCEEEEeCC
Confidence 45556643 236899999999887662 589999999999998877
No 57
>2f5k_A MORF-related gene 15 isoform 1; beta barrel, gene regulation; 2.20A {Homo sapiens} SCOP: b.34.13.3 PDB: 2efi_A
Probab=29.73 E-value=1e+02 Score=24.12 Aligned_cols=36 Identities=14% Similarity=0.061 Sum_probs=30.1
Q ss_pred CCCCCCCCeeeeecCCCCCCcceeEEEeEe----cceEEEEeC
Q psy6236 316 GEALLTLTKEKCFDLTGGKAGPSIKIAHLI----TCLNKIVQN 354 (358)
Q Consensus 316 ~~~F~~gmkLEavd~~~p~~icvAtV~~v~----g~~~~i~~~ 354 (358)
...|++|.|+.+-. ......|+|.+|. +....|||.
T Consensus 20 ~~~f~vGekVl~~~---~~~~YeAkIl~v~~~~~~~~Y~VHY~ 59 (102)
T 2f5k_A 20 KPKFQEGERVLCFH---GPLLYEAKCVKVAIKDKQVKYFIHYS 59 (102)
T ss_dssp SCSCCTTCEEEEES---SSSEEEEEEEEEEEETTEEEEEEEET
T ss_pred CcccCCCCEEEEEE---CCEEEEEEEEEEEEcCCCcEEEEEeC
Confidence 35799999999987 3688999999998 557888886
No 58
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=26.37 E-value=78 Score=26.43 Aligned_cols=46 Identities=11% Similarity=0.085 Sum_probs=34.0
Q ss_pred CCccccCCCCCCCCCCCCCeeeeecCCCCCCcceeEEEeEecceEEEEeCC
Q psy6236 305 APPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQNP 355 (358)
Q Consensus 305 aP~~~F~~~~~~~~F~~gmkLEavd~~~p~~icvAtV~~v~g~~~~i~~~~ 355 (358)
.|.+.|.. ....++||.++.-++.. ..-+++|++|.+..+.|-+|-
T Consensus 74 v~~~~f~~---~~~~~~G~~~~~~~~~G--~~~~~~V~~v~~~~v~vD~NH 119 (158)
T 3cgm_A 74 VPLSAFPE---DAEVVPGAQFYAQDMEG--NPMPLTVVAVEGEEVTVDFNH 119 (158)
T ss_dssp EEGGGSCT---TSCCCTTCEEEEEETTT--EEEEEEEEEEETTEEEEECSC
T ss_pred EEHHHCCC---CCCCccCCEEEEECCCC--CEEEEEEEEECCCEEEEeCCc
Confidence 45555642 13689999999877654 345799999999999988873
No 59
>2rnz_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=25.00 E-value=1e+02 Score=23.67 Aligned_cols=45 Identities=7% Similarity=0.071 Sum_probs=31.1
Q ss_pred CCCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEeecceeeccCCCCcccc
Q psy6236 103 TGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELDEGMYYEDPTGMSKI 155 (358)
Q Consensus 103 ~~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~d~w~~~~sp~gwa~~ 155 (358)
...|++|.|+=+.. -..+..|+|+++.-. -..+.||....||-++
T Consensus 23 ~~~~~vG~kv~v~~---~~~~yeAeIl~ir~~-----~g~~~YYVHY~g~NkR 67 (94)
T 2rnz_A 23 VDDIIIKCQCWVQK---NDEERLAEILSINTR-----KAPPKFYVHYVNYNKR 67 (94)
T ss_dssp GGGCCTTEEEEEEC---SSCEEEEEEEEEECS-----SSSCEEEEECTTSCST
T ss_pred cccccCCCEEEEEE---CCEEEEEEEEEEEEc-----CCCcEEEEEeCCcCcc
Confidence 35699999999985 458999999997531 1235566666666444
No 60
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=24.64 E-value=1e+02 Score=25.42 Aligned_cols=34 Identities=12% Similarity=0.107 Sum_probs=27.1
Q ss_pred CCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEee
Q psy6236 105 GFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEEL 140 (358)
Q Consensus 105 ~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~ 140 (358)
..++||.+++.++.- ...+++|+++.+..+.+-+
T Consensus 93 ~~~~G~~~~~~~~~G--~~~~~~V~~v~~~~v~vD~ 126 (151)
T 2kr7_A 93 ELEKGMSVFGQTEDN--QTIQAIIKDFSATHVMVDY 126 (151)
T ss_dssp CCCTTCEEEEEETTT--EEEEEEEEEECSSEEEEEE
T ss_pred CCccCCEEEEECCCC--CEEEEEEEEECCCEEEEEC
Confidence 578999999987764 3568999999988877544
No 61
>3m9p_A MALE-specific lethal 3 homolog; chromodomain, MSL3, histone H4 tail, DNA backbone recognitio methyllysine recognition, H4K20ME1; HET: DNA MLZ; 2.35A {Homo sapiens} PDB: 3oa6_A* 3ob9_A*
Probab=24.02 E-value=1.9e+02 Score=22.85 Aligned_cols=42 Identities=14% Similarity=0.064 Sum_probs=28.1
Q ss_pred CCCCCCCCcEEEEecC--CCCCCeEEEEEEEecc---------eeeEEeecce
Q psy6236 102 QTGGFVVGMKLESVDP--LNLSDICVATVMKMEG---------YMMLEELDEG 143 (358)
Q Consensus 102 ~~~~F~vGmKLEavD~--~np~~icvATV~~v~G---------~~l~~~~d~w 143 (358)
....|.+|.++=+... -...++.-|.|+++.. ..-.|||.||
T Consensus 16 ~~~~F~~GEkVLc~hgd~~k~~~lYeAKIl~v~~~~~~~g~~~~~Y~VHY~GW 68 (110)
T 3m9p_A 16 MKFKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGW 68 (110)
T ss_dssp --CCSCTTCEEEEECSCTTSCCCEEEEEEEEEEEEECTTCCEEEEEEEEETTS
T ss_pred CCCcccCCCEEEEEcCCCCCCCCceeeEEEEEEeccCcccccceEEEEEECCC
Confidence 4567999999988643 1225799999999842 2345666665
No 62
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=23.89 E-value=58 Score=26.90 Aligned_cols=29 Identities=14% Similarity=0.074 Sum_probs=24.1
Q ss_pred CCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEee
Q psy6236 105 GFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEEL 140 (358)
Q Consensus 105 ~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~ 140 (358)
..++||.+++.+ .+++|+++.|..+.+.|
T Consensus 103 ~~~~G~~~~~~~-------~~~~V~~v~~~~v~vD~ 131 (151)
T 1ix5_A 103 EPEEGMVILAEG-------IPATITEVTDNEVTLDF 131 (151)
T ss_dssp CCCTTEEEESSS-------CEEEEEEEETTEEEEEC
T ss_pred cccccCEEEECC-------eEEEEEEEcCCEEEEeC
Confidence 588999999877 58899999998877554
No 63
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=22.38 E-value=79 Score=26.41 Aligned_cols=41 Identities=15% Similarity=0.037 Sum_probs=29.1
Q ss_pred CCccccCCCCCCCCCCCCCeeeeecCCCCCCcceeEEEeEecceEEEEeC
Q psy6236 305 APPELFNQKINGEALLTLTKEKCFDLTGGKAGPSIKIAHLITCLNKIVQN 354 (358)
Q Consensus 305 aP~~~F~~~~~~~~F~~gmkLEavd~~~p~~icvAtV~~v~g~~~~i~~~ 354 (358)
.|.+.|... .-..++||.+++-+. .++|++|.+..+.|-+|
T Consensus 91 v~~~~f~~~--~~~~~~G~~~~~~~~-------~~~V~~v~~~~V~vD~N 131 (157)
T 3pr9_A 91 IPLSEFTKR--GIKPIKGLTITIDGI-------PGKIVSINSGRVLVDFN 131 (157)
T ss_dssp EEHHHHHHT--TCCCCTTCEEEETTE-------EEEEEEEETTEEEEECS
T ss_pred cCHHHCCcc--cCCcCCCcEEEecCC-------CeEEEEEcCCEEEEECC
Confidence 344455432 124678999998432 58999999999998876
No 64
>3m9q_A Protein MALE-specific lethal-3; chromodomain, MSL3, methyllysine recognition, aromatic CAGE, complex, transcription upregulation; 1.29A {Drosophila melanogaster} SCOP: b.34.13.0
Probab=22.32 E-value=75 Score=24.82 Aligned_cols=36 Identities=6% Similarity=0.142 Sum_probs=24.9
Q ss_pred CCCCCCEEEEEEEEEeC---------CeEEEEEeC--CCCCEEEeCC
Q psy6236 8 KKRISQVKVATIEKIVG---------KRLQVHYYD--DDDGFCCHQD 43 (358)
Q Consensus 8 ~~~~~~~~vAtV~~v~G---------~rl~l~~~~--~~~dfW~~~~ 43 (358)
+.....+.-|.|++|-. ..++|||.| ...|=|+..+
T Consensus 33 ~~kg~~lYeAKIl~v~~~~~~~~~~~~~Y~VHY~GWn~rwDEWV~ed 79 (101)
T 3m9q_A 33 KSKARVLYTSKVLNVFERRNEHGLRFYEYKIHFQGWRPSYDRAVRAT 79 (101)
T ss_dssp TTSCCCEEEEEEEEEEEEECTTSCEEEEEEEEETTSCGGGCEEECGG
T ss_pred CCCCCcceEeEEEEEEecCCccccCceEEEEEeCCCCcCceeecCHH
Confidence 34456788999999874 258888866 5566776543
No 65
>3dlm_A Histone-lysine N-methyltransferase setdb1; setdb1_human, structural genomics, structural genomics consortium, SGC, alternative splicing; 1.77A {Homo sapiens}
Probab=21.94 E-value=1.2e+02 Score=26.82 Aligned_cols=44 Identities=11% Similarity=0.021 Sum_probs=35.0
Q ss_pred CCCCCCCCcEEEEecCCCCCCeEEEEEEEecceeeEEeec-----ceeeccC
Q psy6236 102 QTGGFVVGMKLESVDPLNLSDICVATVMKMEGYMMLEELD-----EGMYYED 148 (358)
Q Consensus 102 ~~~~F~vGmKLEavD~~np~~icvATV~~v~G~~l~~~~d-----~w~~~~s 148 (358)
+.-.+++||.+.+- ....-+-|||+++++-++.+.|+ +|+|=-|
T Consensus 155 pmv~~~~GQ~i~~E---~~g~w~~~~V~~vD~SLv~v~f~~dkr~EWIYRGS 203 (213)
T 3dlm_A 155 PMVLLKSGQLIKTE---WEGTWWKSRVEEVDGSLVRILFLDDKRCEWIYRGS 203 (213)
T ss_dssp CCCCCCTTCEEEEE---ETTEEEEEEEEEEETTEEEEEETTTTEEEEEETTC
T ss_pred ceEEcCCCCEEEEE---ecCcEEEEEEEEEcceeEEEEEcCCCeeEEEEcCC
Confidence 35679999998882 22456789999999999999996 6988665
No 66
>1wgs_A MYST histone acetyltransferase 1; tudor domain, MYST family, struct genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.34.13.3
Probab=20.63 E-value=1.7e+02 Score=23.75 Aligned_cols=37 Identities=16% Similarity=0.176 Sum_probs=28.8
Q ss_pred CCEEEEEEEEEe-----CC-eEEEEEeC--CCCCEEEeCCCCCee
Q psy6236 12 SQVKVATIEKIV-----GK-RLQVHYYD--DDDGFCCHQDSPLIH 48 (358)
Q Consensus 12 ~~~~vAtV~~v~-----G~-rl~l~~~~--~~~dfW~~~~S~~Ih 48 (358)
..+..|.|+++. |. .+.|||.| ...|=|+..+.-.+-
T Consensus 26 ~~~y~AkIl~i~~~~~~~~~~YyVHY~gwNkR~DEWV~~~ri~~~ 70 (133)
T 1wgs_A 26 STWHSAEVIQSRVNDQEGREEFYVHYVGFNRRLDEWVDKNRLALT 70 (133)
T ss_dssp TEEEEEEEEEEEEETTTTEEEEEEECTTTCSSCCEEECTTTSCCT
T ss_pred CCEEEEEEEEEEeccCCCceEEEEeccCcCCCceeecChhhcccc
Confidence 478899999977 22 59999976 678999998776543
No 67
>2ro0_A Histone acetyltransferase ESA1; HAT, chromodomain, tudor domain, RNA binding, activator, chromatin regulator, transcription; NMR {Saccharomyces cerevisiae}
Probab=20.24 E-value=2.8e+02 Score=20.98 Aligned_cols=36 Identities=6% Similarity=-0.147 Sum_probs=29.5
Q ss_pred CCCCCCCCeeeeecCCCCCCcceeEEEeEec----ceEEEEeC
Q psy6236 316 GEALLTLTKEKCFDLTGGKAGPSIKIAHLIT----CLNKIVQN 354 (358)
Q Consensus 316 ~~~F~~gmkLEavd~~~p~~icvAtV~~v~g----~~~~i~~~ 354 (358)
...|.+|.|+-|-. ......|+|.++.. ....|||.
T Consensus 21 ~~~~~vG~kv~v~~---~~~~y~AkIl~ir~~~~~~~YyVHY~ 60 (92)
T 2ro0_A 21 VDDIIIKCQCWVQK---NDEERLAEILSINTRKAPPKFYVHYV 60 (92)
T ss_dssp TTSCCTTCEEEEEE---TTEEEEEEEEEEECSSSSCEEEEEET
T ss_pred cccccCCCEEEEEE---CCEEEEEEEEEEEEcCCCcEEEEEeC
Confidence 35799999999985 35889999999874 57888885
Done!