RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy624
(69 letters)
>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 270
Score = 30.3 bits (68), Expect = 0.009
Identities = 6/26 (23%), Positives = 16/26 (61%)
Query: 42 RIGKQASDNRILGTPDYLAPELLLGQ 67
+ + + ++GTP+++APE+ +
Sbjct: 163 TLKRASFAKAVIGTPEFMAPEMYEEK 188
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 293
Score = 29.0 bits (64), Expect = 0.030
Identities = 7/35 (20%), Positives = 15/35 (42%)
Query: 35 FRTPKSVRIGKQASDNRILGTPDYLAPELLLGQDH 69
+R P + + + GT Y++ LG++
Sbjct: 156 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQ 190
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 271
Score = 28.4 bits (63), Expect = 0.043
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 44 GKQASDNRILGTPDYLAPELLLGQDH 69
++ N++ GT Y+APELL ++
Sbjct: 157 NRERLLNKMCGTLPYVAPELLKRREF 182
>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 263
Score = 27.6 bits (61), Expect = 0.080
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 42 RIGKQASDNRILGTPDYLAPELLLGQDH 69
+ + GT DYL PE++ G+ H
Sbjct: 154 VHAPSSRRTTLCGTLDYLPPEMIEGRMH 181
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 309
Score = 26.9 bits (59), Expect = 0.14
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 48 SDNRILGTPDYLAPELLLGQDH 69
N +GTP ++APE++L D
Sbjct: 167 PANSFVGTPYWMAPEVILAMDE 188
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 26.7 bits (58), Expect = 0.18
Identities = 6/35 (17%), Positives = 14/35 (40%)
Query: 35 FRTPKSVRIGKQASDNRILGTPDYLAPELLLGQDH 69
+R ++ + + + GT Y + LG +
Sbjct: 156 YRDARTHQHIPYRENKNLTGTARYASINTHLGIEQ 190
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein
kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 322
Score = 26.2 bits (57), Expect = 0.30
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 50 NRILGTPDYLAPELLLGQDH 69
N +GT Y++PE L G +
Sbjct: 161 NSFVGTRSYMSPERLQGTHY 180
>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId:
9606]}
Length = 276
Score = 26.1 bits (57), Expect = 0.34
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 50 NRILGTPDYLAPELLLGQDH 69
++ G+ ++APE++ QD
Sbjct: 164 EQLSGSILWMAPEVIRMQDK 183
>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 303
Score = 25.6 bits (55), Expect = 0.51
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 46 QASDNRILGTPDYLAPELLLGQDH 69
+ N +GT Y+APE+L +
Sbjct: 166 DIAPNHRVGTKRYMAPEVLDDSIN 189
>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic
domain {Mycobacterium tuberculosis [TaxId: 1773]}
Length = 277
Score = 25.1 bits (54), Expect = 0.84
Identities = 7/20 (35%), Positives = 10/20 (50%)
Query: 50 NRILGTPDYLAPELLLGQDH 69
++GT YL+PE G
Sbjct: 172 AAVIGTAQYLSPEQARGDSV 191
>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo
sapiens) [TaxId: 9606]}
Length = 277
Score = 24.7 bits (53), Expect = 0.96
Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Query: 16 DPMSPVSPIATPHPAKKIPFRTPKSVRIGKQA--SDNRILGTPDYLAPELLLGQDH 69
D + + T H AK F K++R + + + APE +
Sbjct: 132 DLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKF 187
>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein
kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 273
Score = 24.7 bits (53), Expect = 1.0
Identities = 6/28 (21%), Positives = 9/28 (32%)
Query: 42 RIGKQASDNRILGTPDYLAPELLLGQDH 69
+ K GT Y PE + +
Sbjct: 159 ALLKDTVYTDFDGTRVYSPPEWIRYHRY 186
>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 258
Score = 24.3 bits (52), Expect = 1.4
Identities = 7/46 (15%), Positives = 13/46 (28%)
Query: 24 IATPHPAKKIPFRTPKSVRIGKQASDNRILGTPDYLAPELLLGQDH 69
+ K F + V + S + PE+L+
Sbjct: 133 VNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 178
>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 307
Score = 23.5 bits (50), Expect = 2.6
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 50 NRILGTPDYLAPELLLGQDH 69
+ GTP Y+APE+L + +
Sbjct: 167 STACGTPGYVAPEVLAQKPY 186
>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein
kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 288
Score = 23.4 bits (50), Expect = 2.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 44 GKQASDNRILGTPDYLAPELLLGQDH 69
KQA N +GT Y++PELL +
Sbjct: 162 SKQARANSFVGTAQYVSPELLTEKSA 187
>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human
(Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 23.2 bits (49), Expect = 3.1
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 40 SVRIGKQASDNRILGTPDYLAPELLLGQDH 69
+ +I I GTP+++APE++ +
Sbjct: 164 AHKIDFGNEFKNIFGTPEFVAPEIVNYEPL 193
>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare
(Aplysia californica), twk43 [TaxId: 6500]}
Length = 352
Score = 23.1 bits (49), Expect = 3.4
Identities = 4/30 (13%), Positives = 12/30 (40%)
Query: 40 SVRIGKQASDNRILGTPDYLAPELLLGQDH 69
+ ++ T ++ APE++ +
Sbjct: 176 ATKLNPDEIVKVTTATAEFAAPEIVDREPV 205
>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo
sapiens) [TaxId: 9606]}
Length = 320
Score = 22.8 bits (48), Expect = 4.4
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 45 KQASDNRILGTPDYLAPELLLGQDH 69
A N GTPDY+APE+LLGQ +
Sbjct: 156 GDAKTNTFCGTPDYIAPEILLGQKY 180
>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 317
Score = 22.8 bits (48), Expect = 5.0
Identities = 4/25 (16%), Positives = 10/25 (40%)
Query: 45 KQASDNRILGTPDYLAPELLLGQDH 69
K+ ++A E +L + +
Sbjct: 166 KEYHAEGGKVPIKWMALESILHRIY 190
>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo
sapiens) [TaxId: 9606]}
Length = 273
Score = 22.8 bits (48), Expect = 5.3
Identities = 5/40 (12%), Positives = 13/40 (32%)
Query: 30 AKKIPFRTPKSVRIGKQASDNRILGTPDYLAPELLLGQDH 69
K F + + ++ ++APE + +
Sbjct: 147 VKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 186
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2,
mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 335
Score = 22.7 bits (48), Expect = 5.4
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 40 SVRIGKQASDNRILGTPDYLAPELLLGQDH 69
+ S TP Y+APE+L + +
Sbjct: 161 AKETTSHNSLTTPCYTPYYVAPEVLGPEKY 190
>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo
sapiens) [TaxId: 9606]}
Length = 263
Score = 22.3 bits (47), Expect = 5.9
Identities = 2/18 (11%), Positives = 6/18 (33%)
Query: 52 ILGTPDYLAPELLLGQDH 69
+ +PE+ +
Sbjct: 162 TKFPVKWASPEVFSFSRY 179
>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 269
Score = 22.3 bits (47), Expect = 7.1
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 50 NRILGTPDYLAPELLLGQDH 69
+GTP Y++PE + +
Sbjct: 172 KAFVGTPYYMSPEQMNRMSY 191
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 293
Score = 22.3 bits (47), Expect = 7.1
Identities = 9/46 (19%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 24 IATPHPAKKIPFRTPKSVRIGKQASDNRILGTPDYLAPELLLGQDH 69
+ K F + +Q+ + ++GTP ++APE++ + +
Sbjct: 149 LGMDGSVKLTDFGFCAQITP-EQSKRSTMVGTPYWMAPEVVTRKAY 193
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.316 0.136 0.421
Gapped
Lambda K H
0.267 0.0523 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 259,584
Number of extensions: 9368
Number of successful extensions: 70
Number of sequences better than 10.0: 1
Number of HSP's gapped: 70
Number of HSP's successfully gapped: 27
Length of query: 69
Length of database: 2,407,596
Length adjustment: 37
Effective length of query: 32
Effective length of database: 1,899,586
Effective search space: 60786752
Effective search space used: 60786752
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.4 bits)