Query psy6242
Match_columns 541
No_of_seqs 431 out of 1904
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 21:23:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6242.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6242hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qww_A SET and MYND domain-con 100.0 6.4E-48 2.2E-52 410.3 14.3 344 55-447 8-377 (433)
2 3n71_A Histone lysine methyltr 100.0 1.1E-47 3.9E-52 414.5 16.4 341 55-447 8-388 (490)
3 3qwp_A SET and MYND domain-con 100.0 3.4E-46 1.2E-50 397.3 8.3 337 56-447 7-366 (429)
4 3rq4_A Histone-lysine N-methyl 99.3 1.2E-12 4E-17 127.3 2.2 74 236-319 154-238 (247)
5 2d8q_A BLU protein, zinc finge 99.0 6.7E-11 2.3E-15 92.2 2.8 43 10-52 13-55 (70)
6 2dj8_A Protein CBFA2T1; zinc f 99.0 7.4E-11 2.5E-15 89.4 2.8 48 5-52 8-55 (60)
7 2od1_A Protein CBFA2T1; zinc f 98.9 2E-10 6.9E-15 86.9 1.6 43 10-52 11-53 (60)
8 3s8p_A Histone-lysine N-methyl 98.9 3.1E-10 1.1E-14 111.4 3.3 74 233-316 180-264 (273)
9 2jw6_A Deformed epidermal auto 98.9 2.9E-10 9.9E-15 83.5 2.0 43 10-52 7-49 (52)
10 2odd_A Protein CBFA2T1; MYND z 98.9 3.1E-10 1.1E-14 87.2 1.8 43 10-52 15-57 (64)
11 1n3j_A A612L, histone H3 lysin 98.7 3E-09 1E-13 92.3 2.3 48 247-294 58-112 (119)
12 2w5y_A Histone-lysine N-methyl 98.5 7.7E-08 2.7E-12 90.2 4.2 51 253-312 124-183 (192)
13 2odd_A Protein CBFA2T1; MYND z 98.3 3.9E-08 1.3E-12 75.3 -1.0 58 72-145 2-60 (64)
14 3smt_A Histone-lysine N-methyl 98.2 1.1E-06 3.8E-11 94.3 5.2 82 223-310 237-329 (497)
15 3ope_A Probable histone-lysine 98.1 1.6E-06 5.4E-11 83.3 4.6 51 253-312 146-205 (222)
16 3f9x_A Histone-lysine N-methyl 98.1 1.1E-06 3.7E-11 80.5 2.8 49 254-302 108-165 (166)
17 3ooi_A Histone-lysine N-methyl 98.0 2.1E-06 7.1E-11 83.0 3.9 51 252-312 164-223 (232)
18 3qxy_A N-lysine methyltransfer 98.0 2.7E-06 9.2E-11 90.4 5.1 80 223-309 183-277 (449)
19 3h6l_A Histone-lysine N-methyl 97.8 7.8E-06 2.7E-10 81.0 4.0 50 253-312 190-248 (278)
20 1ml9_A Histone H3 methyltransf 97.8 9.1E-06 3.1E-10 81.7 3.8 60 253-312 220-293 (302)
21 3qww_A SET and MYND domain-con 97.8 3.6E-06 1.2E-10 89.0 0.7 48 5-52 42-91 (433)
22 3hna_A Histone-lysine N-methyl 97.8 4.3E-06 1.5E-10 83.3 0.6 52 253-312 216-280 (287)
23 3qwp_A SET and MYND domain-con 97.7 5.7E-06 2E-10 87.4 -0.3 48 5-52 40-89 (429)
24 2h21_A Ribulose-1,5 bisphospha 97.6 4E-05 1.4E-09 81.1 5.5 82 224-310 159-257 (440)
25 2f69_A Histone-lysine N-methyl 97.6 3.5E-05 1.2E-09 75.6 4.0 42 253-294 186-237 (261)
26 2r3a_A Histone-lysine N-methyl 97.5 5.2E-05 1.8E-09 75.9 4.5 39 253-291 215-266 (300)
27 1mvh_A Cryptic LOCI regulator 97.5 5.7E-05 2E-09 75.6 4.2 40 253-292 213-265 (299)
28 3n71_A Histone lysine methyltr 97.5 1.6E-05 5.5E-10 85.3 -0.3 47 6-52 43-91 (490)
29 3bo5_A Histone-lysine N-methyl 97.5 7.9E-05 2.7E-09 74.3 4.7 42 252-293 204-255 (290)
30 2dj8_A Protein CBFA2T1; zinc f 97.4 2.3E-05 8E-10 58.9 0.1 43 96-145 15-58 (60)
31 1h3i_A Histone H3 lysine 4 spe 97.3 0.00012 4.1E-09 73.2 3.3 40 253-292 240-289 (293)
32 2jw6_A Deformed epidermal auto 97.2 8.4E-05 2.9E-09 54.0 1.5 40 97-143 10-50 (52)
33 2od1_A Protein CBFA2T1; zinc f 97.2 4.4E-05 1.5E-09 57.3 -0.7 42 97-145 14-56 (60)
34 2d8q_A BLU protein, zinc finge 97.1 7.9E-05 2.7E-09 57.7 0.1 43 97-146 16-59 (70)
35 2qpw_A PR domain zinc finger p 96.9 0.0007 2.4E-08 60.5 4.2 39 254-293 100-147 (149)
36 2yqq_A Zinc finger HIT domain- 92.5 0.062 2.1E-06 39.2 2.3 38 10-52 10-47 (56)
37 1x4s_A Protein FON, zinc finge 92.5 0.021 7.2E-07 42.0 -0.2 38 97-142 12-49 (59)
38 2yqq_A Zinc finger HIT domain- 92.1 0.037 1.3E-06 40.3 0.7 36 97-143 13-48 (56)
39 3db5_A PR domain zinc finger p 88.9 0.3 1E-05 43.4 3.9 38 254-292 98-144 (151)
40 1x4s_A Protein FON, zinc finge 88.8 0.099 3.4E-06 38.4 0.5 31 12-43 11-45 (59)
41 1n3j_A A612L, histone H3 lysin 85.5 0.29 9.9E-06 41.4 1.7 35 55-90 5-39 (119)
42 3ep0_A PR domain zinc finger p 85.3 0.64 2.2E-05 42.1 3.9 37 255-292 103-148 (170)
43 3ope_A Probable histone-lysine 75.6 1.1 3.7E-05 42.4 1.9 35 55-89 75-109 (222)
44 3dal_A PR domain zinc finger p 74.7 1.9 6.4E-05 39.9 3.3 37 254-291 132-177 (196)
45 3f9x_A Histone-lysine N-methyl 69.0 1.4 4.6E-05 39.4 0.9 34 55-88 31-64 (166)
46 3ooi_A Histone-lysine N-methyl 68.4 2.8 9.7E-05 39.7 3.1 34 55-88 93-126 (232)
47 3ihx_A PR domain zinc finger p 67.0 3.4 0.00012 36.5 3.1 37 254-291 97-142 (152)
48 2lur_A Kalata; beta hairpin, p 62.4 1 3.5E-05 26.8 -0.8 7 476-482 17-23 (29)
49 3ray_A PR domain-containing pr 58.0 6.6 0.00023 37.2 3.4 38 254-292 141-187 (237)
50 2w5y_A Histone-lysine N-methyl 56.7 3.4 0.00012 38.0 1.2 34 55-88 53-86 (192)
51 3h6l_A Histone-lysine N-methyl 49.9 5.2 0.00018 39.0 1.3 34 55-88 118-151 (278)
52 3zyq_A Hepatocyte growth facto 47.3 27 0.00092 32.7 5.8 40 443-486 156-195 (226)
53 3hna_A Histone-lysine N-methyl 44.4 6.3 0.00022 38.6 0.9 34 55-88 148-181 (287)
54 1z60_A TFIIH basal transcripti 36.0 14 0.00046 27.1 1.4 31 97-130 16-46 (59)
55 1pft_A TFIIB, PFTFIIBN; N-term 35.6 18 0.00062 25.1 1.9 31 326-364 5-36 (50)
56 3smt_A Histone-lysine N-methyl 33.6 9.3 0.00032 40.4 0.2 41 41-83 81-122 (497)
57 3bo5_A Histone-lysine N-methyl 31.8 12 0.00042 36.5 0.7 33 55-87 127-159 (290)
58 1dvp_A HRS, hepatocyte growth 31.7 33 0.0011 31.8 3.7 39 444-486 154-192 (220)
59 1wfp_A Zinc finger (AN1-like) 31.2 36 0.0012 25.9 3.1 25 97-125 26-50 (74)
60 1wfh_A Zinc finger (AN1-like) 30.2 34 0.0012 25.3 2.7 25 97-125 16-40 (64)
61 1mvh_A Cryptic LOCI regulator 30.0 18 0.0006 35.6 1.5 34 55-88 138-171 (299)
62 1ml9_A Histone H3 methyltransf 29.3 19 0.00064 35.4 1.5 34 55-88 134-167 (302)
63 3h0g_L DNA-directed RNA polyme 28.6 34 0.0012 25.3 2.4 26 453-478 21-46 (63)
64 1x4w_A Hypothetical protein FL 28.4 25 0.00085 26.3 1.7 27 9-37 12-44 (67)
65 2f69_A Histone-lysine N-methyl 28.1 17 0.00058 35.0 1.0 34 55-88 110-145 (261)
66 1dl6_A Transcription factor II 27.8 32 0.0011 24.9 2.2 37 320-364 5-42 (58)
67 1wg2_A Zinc finger (AN1-like) 27.5 27 0.00094 25.9 1.8 25 97-125 16-40 (64)
68 1vfy_A Phosphatidylinositol-3- 26.3 37 0.0013 25.6 2.4 32 97-130 12-43 (73)
69 1wff_A Riken cDNA 2810002D23 p 26.0 61 0.0021 25.4 3.6 26 97-125 26-51 (85)
70 1h3i_A Histone H3 lysine 4 spe 25.1 20 0.0007 34.8 1.0 34 55-88 164-199 (293)
71 3s8p_A Histone-lysine N-methyl 23.9 21 0.00071 34.6 0.7 23 61-83 143-165 (273)
72 2ct7_A Ring finger protein 31; 23.7 26 0.00088 27.4 1.1 35 113-149 43-78 (86)
73 1y02_A CARP2, FYVE-ring finger 23.3 27 0.00094 29.3 1.3 33 96-130 19-51 (120)
74 1weo_A Cellulose synthase, cat 22.5 58 0.002 25.7 2.9 34 451-485 14-49 (93)
75 1vq8_Z 50S ribosomal protein L 22.4 20 0.00069 28.1 0.2 31 325-363 26-56 (83)
76 2r3a_A Histone-lysine N-methyl 22.2 34 0.0012 33.5 1.9 33 56-88 142-175 (300)
77 2con_A RUH-035 protein, NIN on 21.2 39 0.0013 26.2 1.6 23 97-121 16-38 (79)
78 1lv3_A Hypothetical protein YA 20.8 38 0.0013 25.4 1.4 35 11-46 8-42 (68)
79 1wvo_A Sialic acid synthase; a 20.5 32 0.0011 26.5 1.0 22 63-84 4-25 (79)
80 3na7_A HP0958; flagellar bioge 20.2 1E+02 0.0035 29.2 4.8 34 444-477 189-229 (256)
No 1
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=100.00 E-value=6.4e-48 Score=410.28 Aligned_cols=344 Identities=18% Similarity=0.232 Sum_probs=260.3
Q ss_pred CccccCCcccchhhccccCCCCCccccccCCeeeccccCCCCcccccccCCCCCCCCCCcCCCCCCcc-ccChhhhcccc
Q psy6242 55 PYEIKSSPLLGRYLQATLDLHPGDRIARESPLIVGPKLALAEPICLGCHKPLNPNLADNARCPRCFWP-ACSARCSGLSD 133 (541)
Q Consensus 55 ~~~i~~s~~~GR~l~A~~~i~~Ge~I~~e~plv~~p~~~~~~~~C~~C~~~~~~~~~~~~~C~~C~~~-yCS~~C~~~~~ 133 (541)
.+++..+|.+||+++|+++|++|++|+.|.|++.++.......+|.+|++... .+.+|++|+++ |||++|+..+|
T Consensus 8 ~ve~~~~~~~GRgl~A~r~i~~Ge~Il~e~P~a~~~~~~~~~~~C~~C~~~~~----~~~~C~~C~~~~yCs~~Cq~~~w 83 (433)
T 3qww_A 8 GLERFCSAGKGRGLRALRPFHVGDLLFSCPAYACVLTVGERGHHCECCFARKE----GLSKCGRCKQAFYCDVECQKEDW 83 (433)
T ss_dssp TEEEEECTTSCEEEEESSCBCTTCEEEEEECSEEEECGGGTTTBCTTTCCBCS----SCEECTTTSCCEESSHHHHHHHH
T ss_pred cEEEeecCCCcCeEEECCCCCCCCEEEecCCceEEecccccCCcCCcccccCC----CCCCCCCCcceeecChhhhhhhh
Confidence 67788999999999999999999999999999988876666699999999754 37899999997 99999999654
Q ss_pred CCCCHhhhhhhhhcchhhhccCccchhcHHHHHHHHHhcCCh-----hhHHHHHHhhhhhccCCCCchhHHHHHHHHHHH
Q psy6242 134 AHTHAPECAILKLGCETLLAYNDYKYEAILPLRCLILQRRSP-----KKYQELKDMEAHMSKRGPGTEVYEEIDSIVKYL 208 (541)
Q Consensus 134 ~~~H~~EC~~l~~~~~~~~~~~~~~~~~~l~lR~l~~~~~~~-----~~~~~v~~L~sh~~~~~~~~~~~~~~~~i~~~L 208 (541)
.+|+.||..++.++... .+...+++++|+++....++ +.+..|..|++|.+++ .+ +....+...+..|
T Consensus 84 -~~Hk~eC~~l~~~~~~~----~p~~~~rl~~Ril~~~~~~~~~~~~~~~~~~~~L~sh~~~~-~~-~~~~~~~~~~~~l 156 (433)
T 3qww_A 84 -PLHKLECSSMVVLGENW----NPSETVRLTARILAKQKIHPERTPSEKLLAVREFESHLDKL-DN-EKKDLIQSDIAAL 156 (433)
T ss_dssp -HHHTTTHHHHHHSSTTC----CCCHHHHHHHHHHHHHHHCCSCCGGGSSCCGGGCCCCGGGC-CH-HHHHHHHHHHHHH
T ss_pred -hHHHHHHHHHHHhCccC----CCcHHHHHHHHHHHHhhhccccCchhhhhhHHHHHhhhhcc-Ch-HHHHHHHHHHHHH
Confidence 79999999999875421 13456899999988753332 2345678999999987 43 2222222223344
Q ss_pred HHHHhhhCCCCCCCcCCHHHHHHHHhhhhcccccc-C----CceeEEecccccccCCCCCCceeeeeCCeEEEEe-----
Q psy6242 209 RSNFLEKLPGDVLDDTSAKCLHWICGVIEVNGVDI-G----RYTQGLYSVICLMEHNCLPNAKHSNMMQSKLFVF----- 278 (541)
Q Consensus 209 ~~~~~~~l~~~~l~~~~~~~i~~i~~~l~~Naf~i-~----~~g~glYp~~Sl~NHSC~PN~~~~f~~~~~i~vr----- 278 (541)
..+| +. .+..++.++|..+++++++|+|+| + ..|+||||.+|+|||||.||+.+.|++. .++||
T Consensus 157 ~~~~----~~-~~~~~~~~~i~~~~~~~~~N~f~i~~~~~~~~g~gl~p~~s~~NHsC~PN~~~~~~~~-~~~~~a~r~I 230 (433)
T 3qww_A 157 HQFY----SK-YLEFPDHSSLVVLFAQVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGT-LAEVRAVQEI 230 (433)
T ss_dssp HHHH----TT-TCCCCCHHHHHHHHHHHHHHCEEEECTTCCEEEEEECTTGGGSEECSSCSEEEEEETT-EEEEEESSCB
T ss_pred HHHH----hc-ccCCCCHHHHHHHHHHHcCCceecccCCccceeEEecccccccCCCCCCCceEEEcCC-EEEEEeccCc
Confidence 4544 11 122358899999999999999999 2 4589999999999999999999999986 67776
Q ss_pred -cCCeeeeeccCCCCChHHHHHHHhcCCCeEEeccCCCCCCccccccccccccccCCCCCceeeecCCCCCCCCCcccCc
Q psy6242 279 -RDTHISTMYTNALWGTQPRREHLAITKYFNCSCERCSDPTELGTYFSAMKCLNEHKDQGDCWILPVNPLDNDSDWTCGS 357 (541)
Q Consensus 279 -~GeEItisY~d~~~~~~~Rr~~L~~~y~F~C~C~rC~~~~e~~~~l~~~~C~~~~~~~C~g~~lp~~~~~~~~~w~C~~ 357 (541)
+||||||||++..+|+.+||+.|+++|+|+|.|+||.++++.+.. +.. |. .+
T Consensus 231 ~~Geel~i~Y~~~~~~~~~R~~~L~~~~~F~C~C~~C~~~~~d~~~-----~~~-----~~---~~-------------- 283 (433)
T 3qww_A 231 HPGDEVFTSYIDLLYPTEDRNDRLRDSYFFTCECRECTTKDKDKAK-----VEV-----RK---LS-------------- 283 (433)
T ss_dssp CTTCEEEECCSCTTSCHHHHHHHHHHHHSCCCCSHHHHHCTTHHHH-----TCB-----CC---CS--------------
T ss_pred CCCCEEEEeecCCcCCHHHHHHHHhCcCCEEeECCCCCCCCcchhh-----hhh-----hh---cC--------------
Confidence 999999999999999999999999999999999999999874322 222 11 01
Q ss_pred CcCccCHHHHHHHHHHHHHHHHHHHhc--CCC----HHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHhcCCCCccccC
Q psy6242 358 CSARLNARDVHLVTSQLGEQVDKLVQE--NPN----VKSLEEMLTKLEAMFHPHHYHCYAVKHSLIQLYGTQPGYAYTQL 431 (541)
Q Consensus 358 C~~~~~~~~v~~~l~~~~~~~~~~~~~--~~~----~~~le~~l~~~~~~Lhp~h~~~~~~~~~L~~ly~~~~~~~~~~~ 431 (541)
.....+.+..++..+.+.++.+-.. .++ ...+++.|+..+++|+|+|+.++.+...|+.+|...+.|.-.
T Consensus 284 --~~~~~e~v~~~~~~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA-- 359 (433)
T 3qww_A 284 --SPPQAEAIRDMVRYARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGA-- 359 (433)
T ss_dssp --SCCCHHHHHHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHH--
T ss_pred --CCccHHHHHHHHHHHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHH--
Confidence 1112355666665555555554111 122 334667788889999999999999999999999998887522
Q ss_pred CHHHHHhhcce---eeccc
Q psy6242 432 SSSLLERKISY---VMSPN 447 (541)
Q Consensus 432 ~~~~l~rk~~~---~~~Pg 447 (541)
....++-+.+ ++||.
T Consensus 360 -~~~~~~aL~i~~~~lG~~ 377 (433)
T 3qww_A 360 -LKYGQKIIKPYSKHYPVY 377 (433)
T ss_dssp -HHHHHHHHHHHHHHSCSS
T ss_pred -HHHHHHHHHHHHHHcCCC
Confidence 3455555555 66654
No 2
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=100.00 E-value=1.1e-47 Score=414.46 Aligned_cols=341 Identities=21% Similarity=0.304 Sum_probs=266.2
Q ss_pred CccccCCcccchhhccccCCCCCccccccCCeeeccccCCCCcccccccCCCCCCCCCCcCCCCCCcc-ccChhhhcccc
Q psy6242 55 PYEIKSSPLLGRYLQATLDLHPGDRIARESPLIVGPKLALAEPICLGCHKPLNPNLADNARCPRCFWP-ACSARCSGLSD 133 (541)
Q Consensus 55 ~~~i~~s~~~GR~l~A~~~i~~Ge~I~~e~plv~~p~~~~~~~~C~~C~~~~~~~~~~~~~C~~C~~~-yCS~~C~~~~~ 133 (541)
.+++..++.+||+++|+++|++|++|+.|.|++.++.......+|.+|++... .+.+|++|+++ |||++|+..+|
T Consensus 8 ~v~v~~~~~~GR~lvAtr~i~~Ge~Il~e~P~~~v~~~~~~~~~C~~C~~~~~----~~~~C~~C~~~~yCs~~Cq~~~w 83 (490)
T 3n71_A 8 NVEVFTSEGKGRGLKATKEFWAADVIFAERAYSAVVFDSLINFVCHTCFKRQE----KLHRCGQCKFAHYCDRTCQKDAW 83 (490)
T ss_dssp TEEEEECSSSCEEEEESSCBCTTCEEEEECCSEEEECGGGTTTBCTTTCCBCS----CCEECTTTSCCEESSHHHHHHHH
T ss_pred ceEEEecCCCCceEEeccCCCCCCEEEecCCceEEecccccCCcCCCCCCCCC----CCCCCCCCCCcCcCCHHHhhhhh
Confidence 67888999999999999999999999999999876655555599999999653 37899999998 99999999655
Q ss_pred CCCCHhhhhhhhhcchhhhccCccchhcHHHHHHHHHhcCCh-----hhHHHHHHhhhhhccCCCCchhHHHHH-HHHHH
Q psy6242 134 AHTHAPECAILKLGCETLLAYNDYKYEAILPLRCLILQRRSP-----KKYQELKDMEAHMSKRGPGTEVYEEID-SIVKY 207 (541)
Q Consensus 134 ~~~H~~EC~~l~~~~~~~~~~~~~~~~~~l~lR~l~~~~~~~-----~~~~~v~~L~sh~~~~~~~~~~~~~~~-~i~~~ 207 (541)
.+|+.||..++.++. .+...+++++|+|+....++ +.|..+.+|++|.+++ .+ +.++.+. .++.+
T Consensus 84 -~~Hk~eC~~~~~~~~------~p~~~~rl~lRiL~~~~~~~~~~~~~~~~~~~~L~sh~~~~-~~-~~~~~~~~~~~~~ 154 (490)
T 3n71_A 84 -LNHKNECAAIKKYGK------VPNENIRLAARIMWRVEREGTGLTEGCLVSVDDLQNHVEHF-GE-EEQKELRVDVDTF 154 (490)
T ss_dssp -HHHHHHHHHHHHHTS------CCCHHHHHHHHHHHHHHHTTSSBCTTCSSBGGGSCCCGGGC-CH-HHHHHHHHHHHHH
T ss_pred -hHHHHHhHHHHhcCc------CCCHHHHHHHHHHHHhhccCccCcchhhhHHHHHHhhhhhc-Cc-hHHHHHHHHHHHH
Confidence 499999999988752 23457889999998765443 3366789999999988 54 3344444 45555
Q ss_pred HHHHHhhhCCCCCCCcCCHHHHHHHHhhhhcccccc-C-----CceeEEecccccccCCCCCCceeeeeCCe--------
Q psy6242 208 LRSNFLEKLPGDVLDDTSAKCLHWICGVIEVNGVDI-G-----RYTQGLYSVICLMEHNCLPNAKHSNMMQS-------- 273 (541)
Q Consensus 208 L~~~~~~~l~~~~l~~~~~~~i~~i~~~l~~Naf~i-~-----~~g~glYp~~Sl~NHSC~PN~~~~f~~~~-------- 273 (541)
+. +| +. ....++.++|..+++++++|+|+| + ..|.||||.+|+|||||.||+.++|+++.
T Consensus 155 ~~-~~----~~-~~~~~~~~~l~~~~~~~~~N~f~i~~~~g~~~~g~gl~p~~s~~NHSC~PN~~~~~~~~~~~~~~~~~ 228 (490)
T 3n71_A 155 LQ-YW----PP-QSQQFSMQYISHIFGVINCNGFTLSDQRGLQAVGVGIFPNLGLVNHDCWPNCTVIFNNGNHEAVKSMF 228 (490)
T ss_dssp HH-HS----CT-TSCCCCHHHHHHHHHHHHTTEEEEECTTSCSEEEEEECTTGGGCEECSSCSEEEEEECCCCSSSCCCG
T ss_pred HH-Hc----cc-cccCCCHHHHHHHHHHHhccCcccccCCCCccceEEEchhhhhcccCCCCCeeEEecCCccccccccc
Confidence 43 23 32 123478999999999999999999 2 35899999999999999999999998752
Q ss_pred ----EEEEe------cCCeeeeeccCCCCChHHHHHHHhcCCCeEEeccCCCCCCccccccccccccccCCCCCceeeec
Q psy6242 274 ----KLFVF------RDTHISTMYTNALWGTQPRREHLAITKYFNCSCERCSDPTELGTYFSAMKCLNEHKDQGDCWILP 343 (541)
Q Consensus 274 ----~i~vr------~GeEItisY~d~~~~~~~Rr~~L~~~y~F~C~C~rC~~~~e~~~~l~~~~C~~~~~~~C~g~~lp 343 (541)
.|+|| +||||||||+|.++++.+||+.|+++|+|+|.|+||.++++.+.+++. + . |
T Consensus 229 ~~~~~~~v~A~rdI~~GEEltisY~~~~~~~~~R~~~L~~~~~F~C~C~~C~~~~~~~~~~~~-~--~-----~------ 294 (490)
T 3n71_A 229 HTQMRIELRALGKISEGEELTVSYIDFLHLSEERRRQLKKQYYFDCSCEHCQKGLKDDLFLAA-K--E-----D------ 294 (490)
T ss_dssp GGSCEEEEEESSCBCTTCBCEECSSCSCSCHHHHHHHHHHHHSSCCCCHHHHHTTTHHHHTCB-C--S-----S------
T ss_pred cccceEEEEECCCCCCCCEEEEeecCCCCCHHHHHHHHHCCCCeEeeCCCCCCCCcccchhhc-c--c-----C------
Confidence 67776 999999999999999999999999999999999999999986654432 1 0 1
Q ss_pred CCCCCCCCCcccCcCcCccCHHHHHHHHHHHHHHHHHHH--hcCCCHH----HHHHHHHHhhcccCCCChhHHHHHHHHH
Q psy6242 344 VNPLDNDSDWTCGSCSARLNARDVHLVTSQLGEQVDKLV--QENPNVK----SLEEMLTKLEAMFHPHHYHCYAVKHSLI 417 (541)
Q Consensus 344 ~~~~~~~~~w~C~~C~~~~~~~~v~~~l~~~~~~~~~~~--~~~~~~~----~le~~l~~~~~~Lhp~h~~~~~~~~~L~ 417 (541)
...+.+.+..+++.++..++.+. ...+..+ .+++.|+..+++|+++|+.++.+...|+
T Consensus 295 ----------------~~~s~e~v~~~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa 358 (490)
T 3n71_A 295 ----------------PKPSQEVVKEMIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIAS 358 (490)
T ss_dssp ----------------SCCCHHHHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHH
T ss_pred ----------------CCCCHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 12345667777777766655541 1223333 3567888899999999999999999999
Q ss_pred HHHhcCCCCccccCCHHHHHhhcce---eeccc
Q psy6242 418 QLYGTQPGYAYTQLSSSLLERKISY---VMSPN 447 (541)
Q Consensus 418 ~ly~~~~~~~~~~~~~~~l~rk~~~---~~~Pg 447 (541)
.+|...+.|.-. ....++-+.+ ++||.
T Consensus 359 ~~y~~~g~~~eA---~~~~~~aL~i~~~~lG~~ 388 (490)
T 3n71_A 359 EVLSYLQAYEEA---SHYARRMVDGYMKLYHHN 388 (490)
T ss_dssp HHHHHTTCHHHH---HHHHHHHHHHHHHHSCTT
T ss_pred HHHHHhcCHHHH---HHHHHHHHHHHHHHcCCC
Confidence 999998887422 3455555555 67766
No 3
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=100.00 E-value=3.4e-46 Score=397.32 Aligned_cols=337 Identities=18% Similarity=0.237 Sum_probs=245.9
Q ss_pred ccccCCcccchhhccccCCCCCccccccCCeeeccccCCCCcccccccCCCCCCCCCCcCCCCCCcc-ccChhhhccccC
Q psy6242 56 YEIKSSPLLGRYLQATLDLHPGDRIARESPLIVGPKLALAEPICLGCHKPLNPNLADNARCPRCFWP-ACSARCSGLSDA 134 (541)
Q Consensus 56 ~~i~~s~~~GR~l~A~~~i~~Ge~I~~e~plv~~p~~~~~~~~C~~C~~~~~~~~~~~~~C~~C~~~-yCS~~C~~~~~~ 134 (541)
++...++.+||+++|+++|++|++|+.|.|++.++.......+|.+|+++.. .+.+|++|+++ |||++|++.+|.
T Consensus 7 i~~~~~~~~GR~l~Atr~i~~Ge~Il~e~P~~~~~~~~~~~~~C~~C~~~~~----~~~~C~~C~~~~yCs~~Cq~~~w~ 82 (429)
T 3qwp_A 7 VEKFATANRGNGLRAVTPLRPGELLFRSDPLAYTVCKGSRGVVCDRCLLGKE----KLMRCSQCRVAKYCSAKCQKKAWP 82 (429)
T ss_dssp EEEEECSSSSEEEEESSCBCTTCEEEEECCSEEEECGGGBTTBCTTTCCBCS----SCEECTTTSCCEESSHHHHHHTHH
T ss_pred eeecccCCCCCeEEeCCCCCCCCEEEecCCceeeeccccCCCcCcCCCCcCC----CCCcCCCCCCcccCChhhhhhhhh
Confidence 4445589999999999999999999999999999887655699999998754 37899999997 999999996554
Q ss_pred CCCHhhhhhhhhcchhhhccCccchhcHHHHHHHHHhc-C---ChhhHHHHHHhhhhhccCCCCchhHHHHHHHHHHHHH
Q psy6242 135 HTHAPECAILKLGCETLLAYNDYKYEAILPLRCLILQR-R---SPKKYQELKDMEAHMSKRGPGTEVYEEIDSIVKYLRS 210 (541)
Q Consensus 135 ~~H~~EC~~l~~~~~~~~~~~~~~~~~~l~lR~l~~~~-~---~~~~~~~v~~L~sh~~~~~~~~~~~~~~~~i~~~L~~ 210 (541)
+|+.||..++.+...+ +...+++++|+++... . .++.|..+.+|++|.+++ .. +..+.+..++..+..
T Consensus 83 -~Hk~eC~~~~~~~~~~-----~~~~~rl~~rill~~~~~~~~~~~~~~~~~~L~sh~~~~-~~-~~~~~~~~~~~~~~~ 154 (429)
T 3qwp_A 83 -DHKRECKCLKSCKPRY-----PPDSVRLLGRVVFKLMDGAPSESEKLYSFYDLESNINKL-TE-DRKEGLRQLVMTFQH 154 (429)
T ss_dssp -HHHHHHHHHHHTTTCC-----CCHHHHHHHHHHHHHHHSCCCGGGSSSCGGGCCCCGGGC-CH-HHHHHHHHHHHHHHH
T ss_pred -hhHHhhhhHHhcCccC-----CChHHHHHHHHHHHHhcCCCCchhhhhhHHHHhhChhhc-Ch-hHHHHHHHHHHHHHH
Confidence 9999999999875422 2345778888877532 2 224566889999999987 32 222222233333333
Q ss_pred HHhhhCCCCCCCcCCHHHHHHHHhhhhcccccc-C----CceeEEecccccccCCCCCCceeeeeCCeEEEEe------c
Q psy6242 211 NFLEKLPGDVLDDTSAKCLHWICGVIEVNGVDI-G----RYTQGLYSVICLMEHNCLPNAKHSNMMQSKLFVF------R 279 (541)
Q Consensus 211 ~~~~~l~~~~l~~~~~~~i~~i~~~l~~Naf~i-~----~~g~glYp~~Sl~NHSC~PN~~~~f~~~~~i~vr------~ 279 (541)
++...++. .....+.++++++++++.+|+|+| + ..|.||||.+|+|||||.||+.++|++. +++|| +
T Consensus 155 ~l~~~~~~-~~~~~~~~~~~~~~~~~~~N~f~i~~~~~~~~g~~l~~~~s~~NHsC~PN~~~~~~~~-~~~~~a~r~I~~ 232 (429)
T 3qwp_A 155 FMREEIQD-ASQLPPAFDLFEAFAKVICNSFTICNAEMQEVGVGLYPSISLLNHSCDPNCSIVFNGP-HLLLRAVRDIEV 232 (429)
T ss_dssp HTTTTCCS-GGGSCTTCCHHHHHHHHHHHCEEEECTTSCEEEEEECTTGGGCEECSSCSEEEEEETT-EEEEEECSCBCT
T ss_pred HHhhhcCc-cccCCCHHHHHHHHHHHHhcCccccccccccceEEEchhhHhhCcCCCCCeEEEEeCC-EEEEEEeeeECC
Confidence 33122221 001234567999999999999999 2 3589999999999999999999999985 67776 9
Q ss_pred CCeeeeeccCCCCChHHHHHHHhcCCCeEEeccCCCCCCccccccccccccccCCCCCceeeecCCCCCCCCCcccCcCc
Q psy6242 280 DTHISTMYTNALWGTQPRREHLAITKYFNCSCERCSDPTELGTYFSAMKCLNEHKDQGDCWILPVNPLDNDSDWTCGSCS 359 (541)
Q Consensus 280 GeEItisY~d~~~~~~~Rr~~L~~~y~F~C~C~rC~~~~e~~~~l~~~~C~~~~~~~C~g~~lp~~~~~~~~~w~C~~C~ 359 (541)
||||||||++..+++.+||+.|+++|+|+|.|+||.++++.+.++++ . +..|.|
T Consensus 233 GeEl~isY~~~~~~~~~R~~~L~~~~~F~C~C~~C~~~~~~~~~~~~------------------~----~~~~~~---- 286 (429)
T 3qwp_A 233 GEELTICYLDMLMTSEERRKQLRDQYCFECDCFRCQTQDKDADMLTG------------------D----EQVWKE---- 286 (429)
T ss_dssp TCEEEECCSCSSCCHHHHHHHHHHHHCCCCCSHHHHHTTTHHHHTCS------------------C----HHHHHH----
T ss_pred CCEEEEEecCCCCCHHHHHHHHhccCCeEeeCCCCCCCccccccccc------------------c----hhhhHH----
Confidence 99999999999999999999999999999999999998864433221 1 113432
Q ss_pred CccCHHHHHHHHHHHHHHHHHHHhcCCC----HHHHHHHHHHhhcccCCCChhHHHHHHHHHHHHhcCCCCccccCCHHH
Q psy6242 360 ARLNARDVHLVTSQLGEQVDKLVQENPN----VKSLEEMLTKLEAMFHPHHYHCYAVKHSLIQLYGTQPGYAYTQLSSSL 435 (541)
Q Consensus 360 ~~~~~~~v~~~l~~~~~~~~~~~~~~~~----~~~le~~l~~~~~~Lhp~h~~~~~~~~~L~~ly~~~~~~~~~~~~~~~ 435 (541)
+..++ ..++++-.+ +. .+.+++.|+.++++|+|+|+.++.+...|+.+|...+.|.-. .+.
T Consensus 287 -------~~~ll----~~ie~~~~~-g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA---~~~ 351 (429)
T 3qwp_A 287 -------VQESL----KKIEELKAH-WKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEA---LFY 351 (429)
T ss_dssp -------HHHHH----HHHHHHHHT-TCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHH---HHH
T ss_pred -------HHHHH----HHHHHHHhh-ccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhccHHHH---HHH
Confidence 11222 222222111 22 334567777788999999999999999999999987777422 234
Q ss_pred HHhhcce---eeccc
Q psy6242 436 LERKISY---VMSPN 447 (541)
Q Consensus 436 l~rk~~~---~~~Pg 447 (541)
.++-+.+ ++||.
T Consensus 352 ~~~~L~i~~~~lg~~ 366 (429)
T 3qwp_A 352 GTRTMEPYRIFFPGS 366 (429)
T ss_dssp HHHHHHHHHHHSCSS
T ss_pred HHHHHHhHHHHcCCC
Confidence 4554444 55554
No 4
>3rq4_A Histone-lysine N-methyltransferase SUV420H2; suppressor, variegation 4-20 homolog 2, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.80A {Homo sapiens}
Probab=99.25 E-value=1.2e-12 Score=127.27 Aligned_cols=74 Identities=22% Similarity=0.446 Sum_probs=61.0
Q ss_pred hhcccccc----CCceeEEecc-cccccCCCCCCceeeeeCCeEEEEe------cCCeeeeeccCCCCChHHHHHHHhcC
Q psy6242 236 IEVNGVDI----GRYTQGLYSV-ICLMEHNCLPNAKHSNMMQSKLFVF------RDTHISTMYTNALWGTQPRREHLAIT 304 (541)
Q Consensus 236 l~~Naf~i----~~~g~glYp~-~Sl~NHSC~PN~~~~f~~~~~i~vr------~GeEItisY~d~~~~~~~Rr~~L~~~ 304 (541)
...|.|.+ .....++|+. ++++||||.||+.+.+.++.+|.|+ +|||||++|++.+++.
T Consensus 154 ~~~n~f~i~~~~~~~~~~l~~~~ar~iNHSC~PN~~~~~~~~~~i~v~A~rdI~~GEElt~~Y~~~~~~~---------- 223 (247)
T 3rq4_A 154 AGENDFSIMYSTRKRSAQLWLGPAAFINHDCKPNCKFVPADGNAACVKVLRDIEPGDEVTCFYGEGFFGE---------- 223 (247)
T ss_dssp TTTSCTTEEEETTTTEEEEEESGGGGCEECSSCSEEEEEETTTEEEEEESSCBCTTCBCEECCCTTSSSG----------
T ss_pred ccCCcEEEEecCCcccceeecchhhhcCCCCCCCEEEEEeCCCEEEEEECCcCCCCCEEEEecCchhcCC----------
Confidence 34788888 2457899987 8899999999998887655567665 9999999999998854
Q ss_pred CCeEEeccCCCCCCc
Q psy6242 305 KYFNCSCERCSDPTE 319 (541)
Q Consensus 305 y~F~C~C~rC~~~~e 319 (541)
+.|.|.|.+|.++.+
T Consensus 224 ~~f~C~C~~C~~~~~ 238 (247)
T 3rq4_A 224 KNEHCECHTCERKGE 238 (247)
T ss_dssp GGTTCCCHHHHHHTC
T ss_pred CCCEEECCCCCCCCC
Confidence 689999999988765
No 5
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A
Probab=99.04 E-value=6.7e-11 Score=92.23 Aligned_cols=43 Identities=37% Similarity=0.840 Sum_probs=40.9
Q ss_pred ccccccccccCCcCCCCccCcccccCCchhhhhcccccccCCC
Q psy6242 10 EELMRCAVCRETALHKCSACKEVAYCGKQHQKEHWKLHKPKCK 52 (541)
Q Consensus 10 ~~~~~C~~C~~~~~~~Cs~C~~v~YCs~~hQ~~~w~~Hk~~C~ 52 (541)
.....|..|++++.++|++|+.++|||++||+.||+.||..|.
T Consensus 13 ~~~~~C~~C~~~~~~~Cs~Ck~v~YCs~eCQ~~~W~~HK~~C~ 55 (70)
T 2d8q_A 13 PERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEKHGKTCV 55 (70)
T ss_dssp CCCCBCSSSCCBCCCBCTTTSCCBCSCHHHHHHTHHHHHHHCC
T ss_pred CCCCcCCCCCCcccccCCCCCCEeeCCHHHhHHHHHHHHHHHH
Confidence 5567999999999999999999999999999999999999997
No 6
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=99.03 E-value=7.4e-11 Score=89.36 Aligned_cols=48 Identities=29% Similarity=0.727 Sum_probs=43.1
Q ss_pred cccccccccccccccCCcCCCCccCcccccCCchhhhhcccccccCCC
Q psy6242 5 IEIEDEELMRCAVCRETALHKCSACKEVAYCGKQHQKEHWKLHKPKCK 52 (541)
Q Consensus 5 ~~~~~~~~~~C~~C~~~~~~~Cs~C~~v~YCs~~hQ~~~w~~Hk~~C~ 52 (541)
++-.....+.|..|+++++++|++|+.++|||++||+.||+.||..|.
T Consensus 8 ~~~~~~~~~~C~~C~~~~~~~Cs~C~~v~YCs~~CQ~~~W~~Hk~~C~ 55 (60)
T 2dj8_A 8 INQQEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICS 55 (60)
T ss_dssp CCCCCCCSCCCSSSCSCCCEECTTTSCCEESSHHHHHHTHHHHTTTSC
T ss_pred cCcCCCCCcccccCCCCCcccCCCCCCEeeeCHHHHHHHHHHHHHHHH
Confidence 333345678999999999999999999999999999999999999997
No 7
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=98.93 E-value=2e-10 Score=86.92 Aligned_cols=43 Identities=30% Similarity=0.745 Sum_probs=40.8
Q ss_pred ccccccccccCCcCCCCccCcccccCCchhhhhcccccccCCC
Q psy6242 10 EELMRCAVCRETALHKCSACKEVAYCGKQHQKEHWKLHKPKCK 52 (541)
Q Consensus 10 ~~~~~C~~C~~~~~~~Cs~C~~v~YCs~~hQ~~~w~~Hk~~C~ 52 (541)
.....|..|+.+++++|++|+.++|||++||+.||+.||..|.
T Consensus 11 ~~~~~C~~C~~~~~~~Cs~C~~v~YCs~~CQ~~dW~~Hk~~C~ 53 (60)
T 2od1_A 11 DSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICG 53 (60)
T ss_dssp CCSSCCTTTSSCCCEECTTTSCCEESSHHHHHHHHHHHTTTSS
T ss_pred CCCCccccCCCcccccCCCCCCeeecCHHHHHHHHHHHhHHHc
Confidence 4578999999999999999999999999999999999999997
No 8
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=98.93 E-value=3.1e-10 Score=111.42 Aligned_cols=74 Identities=20% Similarity=0.370 Sum_probs=56.3
Q ss_pred HhhhhccccccC----CceeEEe-cccccccCCCCCCceeeeeCCeEEEEe------cCCeeeeeccCCCCChHHHHHHH
Q psy6242 233 CGVIEVNGVDIG----RYTQGLY-SVICLMEHNCLPNAKHSNMMQSKLFVF------RDTHISTMYTNALWGTQPRREHL 301 (541)
Q Consensus 233 ~~~l~~Naf~i~----~~g~glY-p~~Sl~NHSC~PN~~~~f~~~~~i~vr------~GeEItisY~d~~~~~~~Rr~~L 301 (541)
+.....|.|.|+ ....++| ..++++||||.||+.+.+.+..+|.|+ +|||||++|++.+++.
T Consensus 180 ~~~~~~~dF~i~~s~~~~~a~~~g~~arfiNHSC~PN~~~~~~~~~~i~i~A~RdI~~GEELt~~Y~~~~~~~------- 252 (273)
T 3s8p_A 180 LLRHGENDFSVMYSTRKNCAQLWLGPAAFINHDCRPNCKFVSTGRDTACVKALRDIEPGEEISCYYGDGFFGE------- 252 (273)
T ss_dssp HCCTTTSCTTEEEETTTTEEEEEESGGGGCEECSSCSEEEEEEETTEEEEEESSCBCTTCBCEECCCTTTTSG-------
T ss_pred HhhhcccccceeccccccccceecchHHhhCCCCCCCeEEEEcCCCEEEEEECceeCCCCEEEEecCchhcCC-------
Confidence 334457788871 2223454 567899999999999998876566664 9999999999998764
Q ss_pred hcCCCeEEeccCCCC
Q psy6242 302 AITKYFNCSCERCSD 316 (541)
Q Consensus 302 ~~~y~F~C~C~rC~~ 316 (541)
+.|.|.|.+|.-
T Consensus 253 ---~~f~C~C~~c~c 264 (273)
T 3s8p_A 253 ---NNEFCECYTCER 264 (273)
T ss_dssp ---GGTTCCCHHHHH
T ss_pred ---CCeEEECCCCcC
Confidence 479999999963
No 9
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=98.91 E-value=2.9e-10 Score=83.55 Aligned_cols=43 Identities=30% Similarity=0.813 Sum_probs=38.1
Q ss_pred ccccccccccCCcCCCCccCcccccCCchhhhhcccccccCCC
Q psy6242 10 EELMRCAVCRETALHKCSACKEVAYCGKQHQKEHWKLHKPKCK 52 (541)
Q Consensus 10 ~~~~~C~~C~~~~~~~Cs~C~~v~YCs~~hQ~~~w~~Hk~~C~ 52 (541)
.....|..|+.+++++|++|+.++|||++||+.||+.||..|.
T Consensus 7 ~~~~~C~~C~~~~~~~C~~C~~~~YCs~~CQ~~~W~~Hk~~C~ 49 (52)
T 2jw6_A 7 RKEQSCVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHICG 49 (52)
T ss_dssp ----CCSSSSSSCSEECTTTCSSEESSHHHHHHHTTTGGGTTT
T ss_pred ccCCcCCCCCCCCcCcCCCCCCEeecCHHHHHHHHHHHCHHHc
Confidence 3467999999999999999999999999999999999999996
No 10
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens}
Probab=98.90 E-value=3.1e-10 Score=87.17 Aligned_cols=43 Identities=30% Similarity=0.745 Sum_probs=41.0
Q ss_pred ccccccccccCCcCCCCccCcccccCCchhhhhcccccccCCC
Q psy6242 10 EELMRCAVCRETALHKCSACKEVAYCGKQHQKEHWKLHKPKCK 52 (541)
Q Consensus 10 ~~~~~C~~C~~~~~~~Cs~C~~v~YCs~~hQ~~~w~~Hk~~C~ 52 (541)
+....|..|+.+++++|++|+.++|||++||+.||+.||..|.
T Consensus 15 ~~~~~C~~C~~~~~~~Cs~C~~~~YCs~~CQ~~~W~~Hk~~C~ 57 (64)
T 2odd_A 15 DSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHICG 57 (64)
T ss_dssp CCSSSCTTTSSCCCEEETTTSCCEESSHHHHHHHHHHHTTTTT
T ss_pred CCCCcCccccCCCcccCCCCCChhhCCHHHHHHHHHHHhHHHh
Confidence 4678999999999999999999999999999999999999997
No 11
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=98.72 E-value=3e-09 Score=92.28 Aligned_cols=48 Identities=19% Similarity=0.347 Sum_probs=40.5
Q ss_pred eeEEecccccccCCCCCCceeeeeCC-eEEEEe------cCCeeeeeccCCCCCh
Q psy6242 247 TQGLYSVICLMEHNCLPNAKHSNMMQ-SKLFVF------RDTHISTMYTNALWGT 294 (541)
Q Consensus 247 g~glYp~~Sl~NHSC~PN~~~~f~~~-~~i~vr------~GeEItisY~d~~~~~ 294 (541)
+..+++.++++||||.||+...+..+ .++.++ +|||||++|++.+|+.
T Consensus 58 ~~~~~~~~~~~NHsc~pN~~~~~~~~~~~~~~~A~rdI~~GeElt~~Y~~~~~~~ 112 (119)
T 1n3j_A 58 SAMALGFGAIFNHSKDPNARHELTAGLKRMRIFTIKPIAIGEEITISYGDDYWLS 112 (119)
T ss_dssp EEEESSSHHHHHSCSSCCCEEEECSSSSCEEEEECSCBCSSEEECCCCCCCCCCC
T ss_pred cccccCceeeeccCCCCCeeEEEECCCeEEEEEEccccCCCCEEEEecCchhhcC
Confidence 46788999999999999999998743 345543 9999999999999876
No 12
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=98.47 E-value=7.7e-08 Score=90.22 Aligned_cols=51 Identities=20% Similarity=0.448 Sum_probs=35.1
Q ss_pred ccccccCCCCCCceeee---eCCeEEEEe------cCCeeeeeccCCCCChHHHHHHHhcCCCeEEecc
Q psy6242 253 VICLMEHNCLPNAKHSN---MMQSKLFVF------RDTHISTMYTNALWGTQPRREHLAITKYFNCSCE 312 (541)
Q Consensus 253 ~~Sl~NHSC~PN~~~~f---~~~~~i~vr------~GeEItisY~d~~~~~~~Rr~~L~~~y~F~C~C~ 312 (541)
.+.++||||.||+...+ ++..+|.++ +|||||++|.+..+.. .+.|.|.|.
T Consensus 124 ~arfiNHSC~PN~~~~~~~~~g~~~i~i~A~rdI~~GEELt~dY~~~~~~~---------~~~~~C~Cg 183 (192)
T 2w5y_A 124 AARFINHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFPIEDA---------SNKLPCNCG 183 (192)
T ss_dssp GGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCEEEECCCC----------------CCBCCCC
T ss_pred hhHhhccCCCCCEEEEEEEECCcEEEEEEECcccCCCCEEEEEcCCchhcC---------CCCceeECC
Confidence 46789999999999753 333455554 9999999999887642 368999994
No 13
>2odd_A Protein CBFA2T1; MYND zinc finger, cross-braced topology, poly-proline, proline-tryptophan interaction, metal binding protein; NMR {Homo sapiens}
Probab=98.34 E-value=3.9e-08 Score=75.35 Aligned_cols=58 Identities=16% Similarity=0.319 Sum_probs=36.7
Q ss_pred cCCCCCccccccCCeeeccccCCCCcccccccCCCCCCCCCCcCCCCCCcc-ccChhhhccccCCCCHhhhhhhh
Q psy6242 72 LDLHPGDRIARESPLIVGPKLALAEPICLGCHKPLNPNLADNARCPRCFWP-ACSARCSGLSDAHTHAPECAILK 145 (541)
Q Consensus 72 ~~i~~Ge~I~~e~plv~~p~~~~~~~~C~~C~~~~~~~~~~~~~C~~C~~~-yCS~~C~~~~~~~~H~~EC~~l~ 145 (541)
++|++|++|+.+.|. ...|..|.+.. +.+|++|+.+ |||.+|+..+|. .|+.+|..+.
T Consensus 2 ~~~~~G~~il~~~~~---------~~~C~~C~~~~------~~~Cs~C~~~~YCs~~CQ~~~W~-~Hk~~C~~~~ 60 (64)
T 2odd_A 2 NLYFQGENLYFQGDS---------SESCWNCGRKA------SETCSGCNTARYCGSFCQHKDWE-KHHHICGQTL 60 (64)
T ss_dssp -------------CC---------SSSCTTTSSCC------CEEETTTSCCEESSHHHHHHHHH-HHTTTTTSSC
T ss_pred CcCCCCCEEeeCCCC---------CCcCccccCCC------cccCCCCCChhhCCHHHHHHHHH-HHhHHHhccc
Confidence 578999999999882 27899999842 6899999998 999999996665 7999998654
No 14
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=98.17 E-value=1.1e-06 Score=94.34 Aligned_cols=82 Identities=13% Similarity=0.133 Sum_probs=63.9
Q ss_pred cCCHHHHHHHHhhhhcccccc-C----CceeEEecccccccCCCCCCceeeeeCCeEEEEe------cCCeeeeeccCCC
Q psy6242 223 DTSAKCLHWICGVIEVNGVDI-G----RYTQGLYSVICLMEHNCLPNAKHSNMMQSKLFVF------RDTHISTMYTNAL 291 (541)
Q Consensus 223 ~~~~~~i~~i~~~l~~Naf~i-~----~~g~glYp~~Sl~NHSC~PN~~~~f~~~~~i~vr------~GeEItisY~d~~ 291 (541)
.++.+.+...++++.+++|.+ . ..+.+|+|.+.|+||||.||.......+..+.++ +||||+|||++.
T Consensus 237 ~~t~e~f~wA~~~v~SRa~~~~~~~g~~~~~~LvP~~Dm~NH~~~~~~~~~~~~~~~~~~~a~~~i~~Geei~isYG~~- 315 (497)
T 3smt_A 237 SFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDMCNHTNGLITTGYNLEDDRCECVALQDFRAGEQIYIFYGTR- 315 (497)
T ss_dssp CCCHHHHHHHHHHHHHHCEEEECTTSSSEEEEECTTGGGCEECSCSEEEEEETTTTEEEEEESSCBCTTCEEEECCCSC-
T ss_pred ccCHHHHHHhhheEecccccccCcccccccceeechHHhhcCCCcccceeeeccCCeEEEEeCCccCCCCEEEEeCCCC-
Confidence 478999999999999999998 2 2367999999999999999755443333344443 999999999985
Q ss_pred CChHHHHHHHhcCCCeEEe
Q psy6242 292 WGTQPRREHLAITKYFNCS 310 (541)
Q Consensus 292 ~~~~~Rr~~L~~~y~F~C~ 310 (541)
+ ...|...|||.+.
T Consensus 316 -~----n~~Ll~~YGFv~~ 329 (497)
T 3smt_A 316 -S----NAEFVIHSGFFFD 329 (497)
T ss_dssp -C----HHHHHHHHSCCCT
T ss_pred -C----hHHHHHHCCCCCC
Confidence 2 3567778999954
No 15
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=98.11 E-value=1.6e-06 Score=83.34 Aligned_cols=51 Identities=18% Similarity=0.374 Sum_probs=37.8
Q ss_pred ccccccCCCCCCceeee--eC-CeEEEEe------cCCeeeeeccCCCCChHHHHHHHhcCCCeEEecc
Q psy6242 253 VICLMEHNCLPNAKHSN--MM-QSKLFVF------RDTHISTMYTNALWGTQPRREHLAITKYFNCSCE 312 (541)
Q Consensus 253 ~~Sl~NHSC~PN~~~~f--~~-~~~i~vr------~GeEItisY~d~~~~~~~Rr~~L~~~y~F~C~C~ 312 (541)
.+.++||||.||+.+.. .+ ..+|.|+ +|||||++|.+..++. ...|.|.|-
T Consensus 146 ~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~---------~~~~~C~CG 205 (222)
T 3ope_A 146 EARFINHSCDPNCEMQKWSVNGVYRIGLYALKDMPAGTELTYDYNFHSFNV---------EKQQLCKCG 205 (222)
T ss_dssp GGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECTTSSBCCC---------SCCCBCCCC
T ss_pred cceeeccCCCCCeEeEEEEECCeEEEEEEECCccCCCCEEEEECCCcccCC---------cCCCEeeCC
Confidence 35588999999998765 22 2455553 9999999999887754 246888776
No 16
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=98.09 E-value=1.1e-06 Score=80.54 Aligned_cols=49 Identities=12% Similarity=0.080 Sum_probs=36.5
Q ss_pred cccccCCCCCCceeee--eCC-eEEEEe------cCCeeeeeccCCCCChHHHHHHHh
Q psy6242 254 ICLMEHNCLPNAKHSN--MMQ-SKLFVF------RDTHISTMYTNALWGTQPRREHLA 302 (541)
Q Consensus 254 ~Sl~NHSC~PN~~~~f--~~~-~~i~vr------~GeEItisY~d~~~~~~~Rr~~L~ 302 (541)
+.++||||.||+.... .++ .+|.+. +|||||++|.+.......|...|+
T Consensus 108 aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~~~~~~~~L~ 165 (166)
T 3f9x_A 108 GRLINHSKCGNCQTKLHDIDGVPHLILIASRDIAAGEELLFDYGDRSKASIEAHPWLK 165 (166)
T ss_dssp GGGCEECTTCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCCCCCHHHHHHCGGGG
T ss_pred hheeecCCCCCeeEEEEEECCeeEEEEEECCcCCCCCEEEEEcCCChhhHhhhCchhc
Confidence 5679999999987653 333 345443 999999999998877777666664
No 17
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=98.04 E-value=2.1e-06 Score=83.05 Aligned_cols=51 Identities=22% Similarity=0.419 Sum_probs=37.7
Q ss_pred cccccccCCCCCCceeee---eCCeEEEEe------cCCeeeeeccCCCCChHHHHHHHhcCCCeEEecc
Q psy6242 252 SVICLMEHNCLPNAKHSN---MMQSKLFVF------RDTHISTMYTNALWGTQPRREHLAITKYFNCSCE 312 (541)
Q Consensus 252 p~~Sl~NHSC~PN~~~~f---~~~~~i~vr------~GeEItisY~d~~~~~~~Rr~~L~~~y~F~C~C~ 312 (541)
-.+.++||||.||+...+ .+..+|.|+ +|||||++|...+++. ..|.|.|.
T Consensus 164 n~aRfiNHSC~PN~~~~~~~~~~~~~i~~~A~RdI~~GEELT~dY~~~~~~~----------~~~~C~CG 223 (232)
T 3ooi_A 164 NYARFMNHCCQPNCETQKWSVNGDTRVGLFALSDIKAGTELTFNYNLECLGN----------GKTVCKCG 223 (232)
T ss_dssp CGGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTCSTTC----------TTCBCCCC
T ss_pred cccccccccCCCCeEEEEEEECCceEEEEEECCccCCCCEEEEECCCCcCCC----------CCcEeECC
Confidence 345689999999998754 233455553 9999999999877642 35899885
No 18
>3qxy_A N-lysine methyltransferase SETD6; epigenetics, protein lysine methyltransferase, transferase, network VIA methyllysine signaling; HET: SAM; 2.09A {Homo sapiens} PDB: 3rc0_A*
Probab=98.04 E-value=2.7e-06 Score=90.36 Aligned_cols=80 Identities=13% Similarity=0.038 Sum_probs=65.9
Q ss_pred cCCHHHHHHHHhhhhcccccc---C------CceeEEecccccccCCCCCCceeeeeCCeEEEEe------cCCeeeeec
Q psy6242 223 DTSAKCLHWICGVIEVNGVDI---G------RYTQGLYSVICLMEHNCLPNAKHSNMMQSKLFVF------RDTHISTMY 287 (541)
Q Consensus 223 ~~~~~~i~~i~~~l~~Naf~i---~------~~g~glYp~~Sl~NHSC~PN~~~~f~~~~~i~vr------~GeEItisY 287 (541)
.++.+.+....+.+..-+|.+ + ..+.+|.|.+.|+||||.||+.+.|+++ .++++ +||||+|||
T Consensus 183 ~~t~e~f~wA~~~v~SRsf~~~~~~~~~~~~~~~~~LvP~~D~~NH~~~~~~~~~~~~~-~~~~~a~~~i~~Geei~~~Y 261 (449)
T 3qxy_A 183 VRSLELYHQLVALVMAYSFQEPLEEEEDEKEPNSPVMVPAADILNHLANHNANLEYSAN-CLRMVATQPIPKGHEIFNTY 261 (449)
T ss_dssp GCCHHHHHHHHHHHHHHCBCCCCC-----CCCCCCBBCTTGGGCEECSSCSEEEEECSS-EEEEEESSCBCTTCEEEECC
T ss_pred cCcHHHHHHHHHHHHHHhcccccCcccccccCCceeEeecHHHhcCCCCCCeEEEEeCC-eEEEEECCCcCCCchhhccC
Confidence 368888888899999999987 1 3478999999999999999999999876 45554 999999999
Q ss_pred cCCCCChHHHHHHHhcCCCeEE
Q psy6242 288 TNALWGTQPRREHLAITKYFNC 309 (541)
Q Consensus 288 ~d~~~~~~~Rr~~L~~~y~F~C 309 (541)
++.. ...|...|||..
T Consensus 262 G~~~------n~~ll~~YGF~~ 277 (449)
T 3qxy_A 262 GQMA------NWQLIHMYGFVE 277 (449)
T ss_dssp SSCC------HHHHHHHHSCCC
T ss_pred CCCC------HHHHHHhCCCCC
Confidence 9832 356777899985
No 19
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=97.85 E-value=7.8e-06 Score=80.96 Aligned_cols=50 Identities=22% Similarity=0.465 Sum_probs=35.7
Q ss_pred ccccccCCCCCCceeee--eC-CeEEEEe------cCCeeeeeccCCCCChHHHHHHHhcCCCeEEecc
Q psy6242 253 VICLMEHNCLPNAKHSN--MM-QSKLFVF------RDTHISTMYTNALWGTQPRREHLAITKYFNCSCE 312 (541)
Q Consensus 253 ~~Sl~NHSC~PN~~~~f--~~-~~~i~vr------~GeEItisY~d~~~~~~~Rr~~L~~~y~F~C~C~ 312 (541)
.+.++||||.||+.... .+ ..+|.|. +|||||++|....++. ..|.|.|-
T Consensus 190 ~aRFiNHSC~PN~~~~~~~v~g~~ri~~fA~RdI~~GEELT~dY~~~~~~~----------~~~~C~CG 248 (278)
T 3h6l_A 190 CSRFMNHSCEPNCETQKWTVNGQLRVGFFTTKLVPSGSELTFDYQFQRYGK----------EAQKCFCG 248 (278)
T ss_dssp GGGGCEECSSCSEEEEEEEETTEEEEEEEESSCBCTTCBCEECCTTTEECS----------SCEECCCC
T ss_pred hhhhcccCCCCCceeEEEEeCCceEEEEEECCccCCCCEEEEecCCCcCCC----------CCcEeECC
Confidence 45689999999976543 33 2445443 9999999998765532 46888886
No 20
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=97.81 E-value=9.1e-06 Score=81.69 Aligned_cols=60 Identities=23% Similarity=0.422 Sum_probs=28.0
Q ss_pred ccccccCCCCCCceeeee-CC------eEEEEe------cCCeeeeeccCCCCChHH-HHHHHhcCCCeEEecc
Q psy6242 253 VICLMEHNCLPNAKHSNM-MQ------SKLFVF------RDTHISTMYTNALWGTQP-RREHLAITKYFNCSCE 312 (541)
Q Consensus 253 ~~Sl~NHSC~PN~~~~f~-~~------~~i~vr------~GeEItisY~d~~~~~~~-Rr~~L~~~y~F~C~C~ 312 (541)
.+.++||||.||+.+... ++ .+|.+. +|||||++|.+.++.... .....+....|.|.|-
T Consensus 220 ~arfiNHSC~PN~~~~~~~~~~~~~~~~~i~~~A~rdI~~GeELt~dY~~~~~~~~~~~~~~~k~~~~~~C~CG 293 (302)
T 1ml9_A 220 PTRFINHSCDPNMAIFARVGDHADKHIHDLALFAIKDIPKGTELTFDYVNGLTGLESDAHDPSKISEMTKCLCG 293 (302)
T ss_dssp GGGGCEECSSCSEEEEEEESSGGGGGGCEEEEEESSCBCTTCEEEECTTC------------------------
T ss_pred HHHhcccCCCCCeeEEEEEeccCCCCceEEEEEECCCcCCCCEEEEEECCCccccccccccccccCCCcEeeCC
Confidence 466899999999986532 11 245543 999999999988775432 2222223346888883
No 21
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=97.80 E-value=3.6e-06 Score=89.01 Aligned_cols=48 Identities=38% Similarity=0.796 Sum_probs=42.5
Q ss_pred cccccccccccccccCC--cCCCCccCcccccCCchhhhhcccccccCCC
Q psy6242 5 IEIEDEELMRCAVCRET--ALHKCSACKEVAYCGKQHQKEHWKLHKPKCK 52 (541)
Q Consensus 5 ~~~~~~~~~~C~~C~~~--~~~~Cs~C~~v~YCs~~hQ~~~w~~Hk~~C~ 52 (541)
++........|..|+++ +..+|++|+.+.|||++||+.||+.||..|.
T Consensus 42 ~~~~~~~~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~ 91 (433)
T 3qww_A 42 VLTVGERGHHCECCFARKEGLSKCGRCKQAFYCDVECQKEDWPLHKLECS 91 (433)
T ss_dssp EECGGGTTTBCTTTCCBCSSCEECTTTSCCEESSHHHHHHHHHHHTTTHH
T ss_pred EecccccCCcCCcccccCCCCCCCCCCcceeecChhhhhhhhhHHHHHHH
Confidence 34455678899999975 7889999999999999999999999999996
No 22
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=97.77 E-value=4.3e-06 Score=83.33 Aligned_cols=52 Identities=25% Similarity=0.605 Sum_probs=35.8
Q ss_pred ccccccCCCCCCceee--eeCC-----eEEEEe------cCCeeeeeccCCCCChHHHHHHHhcCCCeEEecc
Q psy6242 253 VICLMEHNCLPNAKHS--NMMQ-----SKLFVF------RDTHISTMYTNALWGTQPRREHLAITKYFNCSCE 312 (541)
Q Consensus 253 ~~Sl~NHSC~PN~~~~--f~~~-----~~i~vr------~GeEItisY~d~~~~~~~Rr~~L~~~y~F~C~C~ 312 (541)
.+.++||||.||+... +... .+|.+. +|||||++|.+.+|... .+.|.|.|-
T Consensus 216 ~aRFiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~RdI~~GEELT~dYg~~~~~~~--------~~~~~C~CG 280 (287)
T 3hna_A 216 VSRFINHHCEPNLVPVRVFMAHQDLRFPRIAFFSTRLIEAGEQLGFDYGERFWDIK--------GKLFSCRCG 280 (287)
T ss_dssp GGGGCEECSSCSEEEEEEESSCCCTTCCEEEEEESSCBCTTCBCEECCCHHHHHHH--------TTTCCCCCC
T ss_pred chheeeecCCCCceeEEEEEecCCCCceeEEEEEcceeCCCCeEEEeCCCcccccC--------CCcCEeeCC
Confidence 3457899999999753 3221 255543 99999999997554321 247999884
No 23
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=97.66 E-value=5.7e-06 Score=87.39 Aligned_cols=48 Identities=31% Similarity=0.682 Sum_probs=42.5
Q ss_pred cccccccccccccccCC--cCCCCccCcccccCCchhhhhcccccccCCC
Q psy6242 5 IEIEDEELMRCAVCRET--ALHKCSACKEVAYCGKQHQKEHWKLHKPKCK 52 (541)
Q Consensus 5 ~~~~~~~~~~C~~C~~~--~~~~Cs~C~~v~YCs~~hQ~~~w~~Hk~~C~ 52 (541)
+|........|..|+++ +..+|++|+.+.|||++||+.||+.||.+|.
T Consensus 40 ~~~~~~~~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~ 89 (429)
T 3qwp_A 40 TVCKGSRGVVCDRCLLGKEKLMRCSQCRVAKYCSAKCQKKAWPDHKRECK 89 (429)
T ss_dssp EECGGGBTTBCTTTCCBCSSCEECTTTSCCEESSHHHHHHTHHHHHHHHH
T ss_pred eeccccCCCcCcCCCCcCCCCCcCCCCCCcccCChhhhhhhhhhhHHhhh
Confidence 44455678899999974 7789999999999999999999999999996
No 24
>2h21_A Ribulose-1,5 bisphosphate carboxylase/oxygenase; SET domain, protein lysine methyltransferase, transferase; HET: SAM; 2.45A {Pisum sativum} SCOP: a.166.1.1 b.85.7.3 PDB: 2h23_A* 2h2e_A* 2h2j_A* 1p0y_A* 1ozv_A* 1mlv_A*
Probab=97.62 E-value=4e-05 Score=81.12 Aligned_cols=82 Identities=10% Similarity=0.072 Sum_probs=60.3
Q ss_pred CCHHHHHHHHhhhhcccccc-CCceeEEecccccccCCCCCCc---eeeeeC-------CeEEEEe------cCCeeeee
Q psy6242 224 TSAKCLHWICGVIEVNGVDI-GRYTQGLYSVICLMEHNCLPNA---KHSNMM-------QSKLFVF------RDTHISTM 286 (541)
Q Consensus 224 ~~~~~i~~i~~~l~~Naf~i-~~~g~glYp~~Sl~NHSC~PN~---~~~f~~-------~~~i~vr------~GeEItis 286 (541)
++.+.+....+++.+.+|.+ +..+.+|.|.+-|+|||+.||+ .+.+++ +..++++ +||||+||
T Consensus 159 ~t~~~f~wA~~~v~SRaf~~~~~~~~~LvP~~D~~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~l~a~~~i~~Geei~~s 238 (440)
T 2h21_A 159 VTLDDFFWAFGILRSRAFSRLRNENLVVVPMADLINHSAGVTTEDHAYEVKGAAGLFSWDYLFSLKSPLSVKAGEQVYIQ 238 (440)
T ss_dssp CCHHHHHHHHHHHHHHCBCCC---CCBCCSSTTSCEECTTCCCCCCEEEC----------CEEEEEESSCBCTTSBCEEC
T ss_pred CCHHHHHHHHHHhcccceeccCCCceEEeechHhhcCCCCcccccceeeecCcccccCCCceEEEEECCCCCCCCEEEEe
Confidence 58889999999999999987 3456899999999999999975 333222 2345554 99999999
Q ss_pred ccCCCCChHHHHHHHhcCCCeEEe
Q psy6242 287 YTNALWGTQPRREHLAITKYFNCS 310 (541)
Q Consensus 287 Y~d~~~~~~~Rr~~L~~~y~F~C~ 310 (541)
|++.. + ...|...|||...
T Consensus 239 YG~~~-~----N~~LL~~YGFv~~ 257 (440)
T 2h21_A 239 YDLNK-S----NAELALDYGFIEP 257 (440)
T ss_dssp SCTTC-C----HHHHHHHSSCCCS
T ss_pred CCCCC-C----HHHHHHhCCCCcC
Confidence 99763 1 3456667999754
No 25
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=97.58 E-value=3.5e-05 Score=75.62 Aligned_cols=42 Identities=12% Similarity=0.118 Sum_probs=30.8
Q ss_pred ccccccCCCCCCceeeee-C-C-eEE-EE---e---cCCeeeeeccCCCCCh
Q psy6242 253 VICLMEHNCLPNAKHSNM-M-Q-SKL-FV---F---RDTHISTMYTNALWGT 294 (541)
Q Consensus 253 ~~Sl~NHSC~PN~~~~f~-~-~-~~i-~v---r---~GeEItisY~d~~~~~ 294 (541)
.+.++||||.||+...+. . . .++ .+ | +|||||++|.....+.
T Consensus 186 ~aRfiNHSC~PN~~~~~~~~~~~~~~i~i~A~RdI~~GEELt~dYg~~~~~~ 237 (261)
T 2f69_A 186 LGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHSPP 237 (261)
T ss_dssp CGGGCEECSSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEECCCCCSCCC
T ss_pred ceeeEeeCCCCCeEEEEEEcCCCCcEEEEEECcccCCCCEEEEEcCCccccc
Confidence 356899999999998872 1 1 233 44 3 9999999998777643
No 26
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=97.53 E-value=5.2e-05 Score=75.89 Aligned_cols=39 Identities=18% Similarity=0.244 Sum_probs=29.2
Q ss_pred ccccccCCCCCCceee--e-eC----CeEEEEe------cCCeeeeeccCCC
Q psy6242 253 VICLMEHNCLPNAKHS--N-MM----QSKLFVF------RDTHISTMYTNAL 291 (541)
Q Consensus 253 ~~Sl~NHSC~PN~~~~--f-~~----~~~i~vr------~GeEItisY~d~~ 291 (541)
.+.++||||.||+... + ++ ..+|.+. +|||||++|.+..
T Consensus 215 ~aRfiNHSC~PN~~~~~v~~~~~d~~~~~i~~~A~rdI~~GEELt~dY~~~~ 266 (300)
T 2r3a_A 215 VSHFVNHSCDPNLQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQMKG 266 (300)
T ss_dssp GGGGCEECSSCSEEEEEEESSCCCTTSCEEEEEESSCBCTTCEEEECGGGSS
T ss_pred hHHheecCCCCCEEEEEEEeccCCCCceEEEEEEccCCCCCCEEEEECCCCc
Confidence 5678999999999874 2 21 1355443 9999999998774
No 27
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=97.49 E-value=5.7e-05 Score=75.62 Aligned_cols=40 Identities=23% Similarity=0.203 Sum_probs=30.1
Q ss_pred ccccccCCCCCCceee--eeC-----CeEEEEe------cCCeeeeeccCCCC
Q psy6242 253 VICLMEHNCLPNAKHS--NMM-----QSKLFVF------RDTHISTMYTNALW 292 (541)
Q Consensus 253 ~~Sl~NHSC~PN~~~~--f~~-----~~~i~vr------~GeEItisY~d~~~ 292 (541)
.+.++||||.||+.+. +.. ..+|.++ +|||||++|.+..+
T Consensus 213 ~aRfiNHSC~PN~~~~~v~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~ 265 (299)
T 1mvh_A 213 VSRFFNHSCSPNIAIYSAVRNHGFRTIYDLAFFAIKDIQPLEELTFDYAGAKD 265 (299)
T ss_dssp GGGGCEECSSCSEEEEEEESCTTCTTSCEEEEEESSCBCTTCBCEECCCTTSS
T ss_pred hhheEeecCCCCeEEEEEEeecCCCCceEEEEEEccCcCCCCEEEEEcCCccc
Confidence 4568999999999863 321 1355543 99999999998877
No 28
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=97.46 E-value=1.6e-05 Score=85.32 Aligned_cols=47 Identities=32% Similarity=0.750 Sum_probs=41.4
Q ss_pred ccccccccccccccCC--cCCCCccCcccccCCchhhhhcccccccCCC
Q psy6242 6 EIEDEELMRCAVCRET--ALHKCSACKEVAYCGKQHQKEHWKLHKPKCK 52 (541)
Q Consensus 6 ~~~~~~~~~C~~C~~~--~~~~Cs~C~~v~YCs~~hQ~~~w~~Hk~~C~ 52 (541)
+........|..|+++ +..+|++|+.+.|||++||+.||+.||.+|.
T Consensus 43 ~~~~~~~~~C~~C~~~~~~~~~C~~C~~~~yCs~~Cq~~~w~~Hk~eC~ 91 (490)
T 3n71_A 43 VFDSLINFVCHTCFKRQEKLHRCGQCKFAHYCDRTCQKDAWLNHKNECA 91 (490)
T ss_dssp ECGGGTTTBCTTTCCBCSCCEECTTTSCCEESSHHHHHHHHHHHHHHHH
T ss_pred ecccccCCcCCCCCCCCCCCCCCCCCCCcCcCCHHHhhhhhhHHHHHhH
Confidence 3445678899999774 6789999999999999999999999999996
No 29
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=97.45 E-value=7.9e-05 Score=74.29 Aligned_cols=42 Identities=21% Similarity=0.338 Sum_probs=31.9
Q ss_pred cccccccCCCCCCceeee---eCC-eEEEEe------cCCeeeeeccCCCCC
Q psy6242 252 SVICLMEHNCLPNAKHSN---MMQ-SKLFVF------RDTHISTMYTNALWG 293 (541)
Q Consensus 252 p~~Sl~NHSC~PN~~~~f---~~~-~~i~vr------~GeEItisY~d~~~~ 293 (541)
-.+.++||||.||+.+.. ++. .+|.++ +|||||++|.+.+|.
T Consensus 204 N~arfiNHSC~PN~~~~~~~~~~~~~~i~~~A~rdI~~GEELt~dY~~~~~~ 255 (290)
T 3bo5_A 204 NIGRFLNHSCEPNLLMIPVRIDSMVPKLALFAAKDIVPEEELSYDYSGRYLN 255 (290)
T ss_dssp CGGGGCEECSSCSEEEEEEESSSSSCEEEEEESSCBCTTCEEEECTTSCTTC
T ss_pred CchheeeecCCCCEEEEEEEeCCCceEEEEEEccccCCCCEEEEECCCcccc
Confidence 345689999999998753 331 355553 999999999998875
No 30
>2dj8_A Protein CBFA2T1; zinc finger MYND domain, protein MTG8, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=97.40 E-value=2.3e-05 Score=58.86 Aligned_cols=43 Identities=19% Similarity=0.431 Sum_probs=35.8
Q ss_pred CcccccccCCCCCCCCCCcCCCCCCcc-ccChhhhccccCCCCHhhhhhhh
Q psy6242 96 EPICLGCHKPLNPNLADNARCPRCFWP-ACSARCSGLSDAHTHAPECAILK 145 (541)
Q Consensus 96 ~~~C~~C~~~~~~~~~~~~~C~~C~~~-yCS~~C~~~~~~~~H~~EC~~l~ 145 (541)
...|..|.+.. +.+|.+|..+ |||.+||.++|. .|+.||..++
T Consensus 15 ~~~C~~C~~~~------~~~Cs~C~~v~YCs~~CQ~~~W~-~Hk~~C~~~~ 58 (60)
T 2dj8_A 15 SESCWNCGRKA------SETCSGCNTARYCGSFCQHKDWE-KHHHICSGPS 58 (60)
T ss_dssp SCCCSSSCSCC------CEECTTTSCCEESSHHHHHHTHH-HHTTTSCCSS
T ss_pred CcccccCCCCC------cccCCCCCCEeeeCHHHHHHHHH-HHHHHHHhcc
Confidence 37899999832 6899999998 999999996665 7999998754
No 31
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=97.25 E-value=0.00012 Score=73.19 Aligned_cols=40 Identities=13% Similarity=0.136 Sum_probs=29.2
Q ss_pred ccccccCCCCCCceeeee-C-C-eEE-EE---e---cCCeeeeeccCCCC
Q psy6242 253 VICLMEHNCLPNAKHSNM-M-Q-SKL-FV---F---RDTHISTMYTNALW 292 (541)
Q Consensus 253 ~~Sl~NHSC~PN~~~~f~-~-~-~~i-~v---r---~GeEItisY~d~~~ 292 (541)
.+.++||||.||+...+. . . .++ .| | +|||||++|.....
T Consensus 240 ~ar~iNHsc~pN~~~~~~~~~~~~~~~~~~a~r~I~~geElt~~Yg~~~~ 289 (293)
T 1h3i_A 240 LGHKANHSFTPNCIYDMFVHPRFGPIKCIRTLRAVEADEELTVAYGYDHS 289 (293)
T ss_dssp CGGGSEEESSCSEEEEEEEETTTEEEEEEEESSCBCTTCEEEEEEETTBC
T ss_pred ceeeeccCCCCCeEEEEEEcCCCCcEEEEEECCccCCCCEEEEecCCCCC
Confidence 355889999999999872 1 1 233 34 3 99999999976553
No 32
>2jw6_A Deformed epidermal autoregulatory factor 1 homolo; zinc binding domain, transcription, alternative splicing, DI mutation, DNA-binding; NMR {Homo sapiens} SCOP: g.85.1.1
Probab=97.24 E-value=8.4e-05 Score=54.00 Aligned_cols=40 Identities=23% Similarity=0.528 Sum_probs=33.0
Q ss_pred cccccccCCCCCCCCCCcCCCCCCcc-ccChhhhccccCCCCHhhhhh
Q psy6242 97 PICLGCHKPLNPNLADNARCPRCFWP-ACSARCSGLSDAHTHAPECAI 143 (541)
Q Consensus 97 ~~C~~C~~~~~~~~~~~~~C~~C~~~-yCS~~C~~~~~~~~H~~EC~~ 143 (541)
..|..|.+.. +.+|++|..+ |||.+||...|. .|+.+|..
T Consensus 10 ~~C~~C~~~~------~~~C~~C~~~~YCs~~CQ~~~W~-~Hk~~C~~ 50 (52)
T 2jw6_A 10 QSCVNCGREA------MSECTGCHKVNYCSTFCQRKDWK-DHQHICGQ 50 (52)
T ss_dssp -CCSSSSSSC------SEECTTTCSSEESSHHHHHHHTT-TGGGTTTC
T ss_pred CcCCCCCCCC------cCcCCCCCCEeecCHHHHHHHHH-HHCHHHcc
Confidence 7899998852 6899999998 999999996655 69999973
No 33
>2od1_A Protein CBFA2T1; zinc finger, cross-braced topology, metal binding protein; NMR {Homo sapiens}
Probab=97.17 E-value=4.4e-05 Score=57.33 Aligned_cols=42 Identities=19% Similarity=0.446 Sum_probs=35.1
Q ss_pred cccccccCCCCCCCCCCcCCCCCCcc-ccChhhhccccCCCCHhhhhhhh
Q psy6242 97 PICLGCHKPLNPNLADNARCPRCFWP-ACSARCSGLSDAHTHAPECAILK 145 (541)
Q Consensus 97 ~~C~~C~~~~~~~~~~~~~C~~C~~~-yCS~~C~~~~~~~~H~~EC~~l~ 145 (541)
..|..|.+.. +.+|.+|+.+ |||.+|+...|. .|+.+|..+.
T Consensus 14 ~~C~~C~~~~------~~~Cs~C~~v~YCs~~CQ~~dW~-~Hk~~C~~~~ 56 (60)
T 2od1_A 14 ESCWNCGRKA------SETCSGCNTARYCGSFCQHKDWE-KHHHICGQTL 56 (60)
T ss_dssp SCCTTTSSCC------CEECTTTSCCEESSHHHHHHHHH-HHTTTSSCSS
T ss_pred CccccCCCcc------cccCCCCCCeeecCHHHHHHHHH-HHhHHHcccc
Confidence 7899998842 6899999998 999999996655 7999998644
No 34
>2d8q_A BLU protein, zinc finger MYND domain containing protein 10; zmynd10, ZF-MYND, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.1 PDB: 2dan_A
Probab=97.09 E-value=7.9e-05 Score=57.73 Aligned_cols=43 Identities=26% Similarity=0.582 Sum_probs=36.1
Q ss_pred cccccccCCCCCCCCCCcCCCCCCcc-ccChhhhccccCCCCHhhhhhhhh
Q psy6242 97 PICLGCHKPLNPNLADNARCPRCFWP-ACSARCSGLSDAHTHAPECAILKL 146 (541)
Q Consensus 97 ~~C~~C~~~~~~~~~~~~~C~~C~~~-yCS~~C~~~~~~~~H~~EC~~l~~ 146 (541)
..|..|.+.. +.+|.+|..+ |||.+||...|.. |+.+|..+..
T Consensus 16 ~~C~~C~~~~------~~~Cs~Ck~v~YCs~eCQ~~~W~~-HK~~C~~~~~ 59 (70)
T 2d8q_A 16 PRCAYCSAEA------SKRCSRCQNEWYCCRECQVKHWEK-HGKTCVLAAQ 59 (70)
T ss_dssp CBCSSSCCBC------CCBCTTTSCCBCSCHHHHHHTHHH-HHHHCCCCCC
T ss_pred CcCCCCCCcc------cccCCCCCCEeeCCHHHhHHHHHH-HHHHHHHHHH
Confidence 7999998842 5899999998 9999999966655 9999997654
No 35
>2qpw_A PR domain zinc finger protein 2; methyltransferase, activator, alternative initiation, alternative splicing, DNA-binding, metal-binding, nucleus; 1.79A {Homo sapiens} PDB: 2jv0_A*
Probab=96.86 E-value=0.0007 Score=60.52 Aligned_cols=39 Identities=8% Similarity=0.077 Sum_probs=30.7
Q ss_pred cccccCCCCC---CceeeeeCCeEEEEe------cCCeeeeeccCCCCC
Q psy6242 254 ICLMEHNCLP---NAKHSNMMQSKLFVF------RDTHISTMYTNALWG 293 (541)
Q Consensus 254 ~Sl~NHSC~P---N~~~~f~~~~~i~vr------~GeEItisY~d~~~~ 293 (541)
+-++||||.| |+...-.+ .+|.++ +|||||+.|.+..+|
T Consensus 100 ~RfINhSc~p~eqNl~~~~~~-~~I~~~A~RdI~~GEEL~~dY~~~~~~ 147 (149)
T 2qpw_A 100 LRYVNWACSGEEQNLFPLEIN-RAIYYKTLKPIAPGEELLVWYNGEDNP 147 (149)
T ss_dssp GGGCEECBTTBTCCEEEEEET-TEEEEEESSCBCTTCBCEECCCCCCCC
T ss_pred eeeeeccCChhhcCEEEEEEC-CEEEEEEccCCCCCCEEEEccCCccCC
Confidence 4579999999 99875444 366553 999999999988765
No 36
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.51 E-value=0.062 Score=39.18 Aligned_cols=38 Identities=29% Similarity=0.773 Sum_probs=30.5
Q ss_pred ccccccccccCCcCCCCccCcccccCCchhhhhcccccccCCC
Q psy6242 10 EELMRCAVCRETALHKCSACKEVAYCGKQHQKEHWKLHKPKCK 52 (541)
Q Consensus 10 ~~~~~C~~C~~~~~~~Cs~C~~v~YCs~~hQ~~~w~~Hk~~C~ 52 (541)
....+|.+|+.++.-+|.+|. +.|||.++.+.|-. .|.
T Consensus 10 ~~~~~C~vC~~~~kY~CPrC~-~~yCSl~C~k~Hk~----~C~ 47 (56)
T 2yqq_A 10 CSTVVCVICLEKPKYRCPACR-VPYCSVVCFRKHKE----QCN 47 (56)
T ss_dssp CCCCCCTTTCSCCSEECTTTC-CEESSHHHHHHHHH----HCC
T ss_pred CCCCccCcCcCCCeeeCCCCC-CCeeCHHHHHHHHh----hCc
Confidence 345589999998888999996 78999999766554 385
No 37
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=92.49 E-value=0.021 Score=41.96 Aligned_cols=38 Identities=39% Similarity=0.714 Sum_probs=28.1
Q ss_pred cccccccCCCCCCCCCCcCCCCCCccccChhhhccccCCCCHhhhh
Q psy6242 97 PICLGCHKPLNPNLADNARCPRCFWPACSARCSGLSDAHTHAPECA 142 (541)
Q Consensus 97 ~~C~~C~~~~~~~~~~~~~C~~C~~~yCS~~C~~~~~~~~H~~EC~ 142 (541)
..|..|...... ...+.|++|+..|||-.|.+ .|+ +|.
T Consensus 12 ~~C~vC~~~~~~--~akY~CPrC~~rYCSl~C~k-----~Hk-~Cs 49 (59)
T 1x4s_A 12 GPCGFCPAGEVQ--PARYTCPRCNAPYCSLRCYR-----THG-TCA 49 (59)
T ss_dssp EEECSSCTTCCE--EECEECTTTCCEESSHHHHH-----HHC-CGG
T ss_pred CcCcCCCCCcCC--CccccCcCCCCCccChHHHH-----HHh-HhC
Confidence 689999852110 12689999999999999987 455 664
No 38
>2yqq_A Zinc finger HIT domain-containing protein 3; structure genomics, ZF-HIT domain, TRIP-3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=92.08 E-value=0.037 Score=40.33 Aligned_cols=36 Identities=33% Similarity=0.794 Sum_probs=29.0
Q ss_pred cccccccCCCCCCCCCCcCCCCCCccccChhhhccccCCCCHhhhhh
Q psy6242 97 PICLGCHKPLNPNLADNARCPRCFWPACSARCSGLSDAHTHAPECAI 143 (541)
Q Consensus 97 ~~C~~C~~~~~~~~~~~~~C~~C~~~yCS~~C~~~~~~~~H~~EC~~ 143 (541)
..|..|.. .. .+.|++|+..|||-.|.+ .|+.+|.-
T Consensus 13 ~~C~vC~~-~~-----kY~CPrC~~~yCSl~C~k-----~Hk~~C~~ 48 (56)
T 2yqq_A 13 VVCVICLE-KP-----KYRCPACRVPYCSVVCFR-----KHKEQCNP 48 (56)
T ss_dssp CCCTTTCS-CC-----SEECTTTCCEESSHHHHH-----HHHHHCCC
T ss_pred CccCcCcC-CC-----eeeCCCCCCCeeCHHHHH-----HHHhhCcC
Confidence 57999988 32 589999999999999977 67666653
No 39
>3db5_A PR domain zinc finger protein 4; methyltransferase, PRDM4, structural genomics, structural GE consortium, SGC, DNA-binding, metal-binding, nucleus; 2.15A {Homo sapiens}
Probab=88.93 E-value=0.3 Score=43.37 Aligned_cols=38 Identities=11% Similarity=0.097 Sum_probs=27.5
Q ss_pred cccccCCCCC---CceeeeeCCeEEEEe------cCCeeeeeccCCCC
Q psy6242 254 ICLMEHNCLP---NAKHSNMMQSKLFVF------RDTHISTMYTNALW 292 (541)
Q Consensus 254 ~Sl~NHSC~P---N~~~~f~~~~~i~vr------~GeEItisY~d~~~ 292 (541)
+.++||+|.+ |+...-.++ +|.++ +||||++-|.+.++
T Consensus 98 mR~Vn~A~~~~eqNl~a~q~~~-~I~~~a~rdI~pGeELlv~Yg~~y~ 144 (151)
T 3db5_A 98 MMFVRKARNREEQNLVAYPHDG-KIFFCTSQDIPPENELLFYYSRDYA 144 (151)
T ss_dssp GGGCEECSSTTTCCEEEEEETT-EEEEEESSCBCTTCBCEEEECC---
T ss_pred eeEEEecCCcccCceEEEEECC-EEEEEEccccCCCCEEEEecCHHHH
Confidence 4578999965 988766654 56544 99999999998875
No 40
>1x4s_A Protein FON, zinc finger HIT domain containing protein 2; structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.85.1.2
Probab=88.85 E-value=0.099 Score=38.38 Aligned_cols=31 Identities=26% Similarity=0.688 Sum_probs=26.4
Q ss_pred ccccccccC----CcCCCCccCcccccCCchhhhhc
Q psy6242 12 LMRCAVCRE----TALHKCSACKEVAYCGKQHQKEH 43 (541)
Q Consensus 12 ~~~C~~C~~----~~~~~Cs~C~~v~YCs~~hQ~~~ 43 (541)
..+|.+|+. ++.-+|.+|. +.|||..+.+.|
T Consensus 11 ~~~C~vC~~~~~~~akY~CPrC~-~rYCSl~C~k~H 45 (59)
T 1x4s_A 11 AGPCGFCPAGEVQPARYTCPRCN-APYCSLRCYRTH 45 (59)
T ss_dssp CEEECSSCTTCCEEECEECTTTC-CEESSHHHHHHH
T ss_pred CCcCcCCCCCcCCCccccCcCCC-CCccChHHHHHH
Confidence 468999984 5788999997 779999999865
No 41
>1n3j_A A612L, histone H3 lysine methyltransferase; beta barrel, homodimer; NMR {Paramecium bursaria chlorella virus 1} SCOP: b.85.7.2 PDB: 2g46_A* 3kma_A 3kmj_A 3kmt_A*
Probab=85.54 E-value=0.29 Score=41.40 Aligned_cols=35 Identities=29% Similarity=0.277 Sum_probs=28.9
Q ss_pred CccccCCcccchhhccccCCCCCccccccCCeeecc
Q psy6242 55 PYEIKSSPLLGRYLQATLDLHPGDRIARESPLIVGP 90 (541)
Q Consensus 55 ~~~i~~s~~~GR~l~A~~~i~~Ge~I~~e~plv~~p 90 (541)
.+++..++.+|+|++|+++|++|++|. |.+-.+.+
T Consensus 5 ~~~v~~s~~~G~GvfA~~~I~~G~~I~-ey~g~vi~ 39 (119)
T 1n3j_A 5 RVIVKKSPLGGYGVFARKSFEKGELVE-ECLCIVRH 39 (119)
T ss_dssp SEEEECSCSSCCEEEECCCBCSCEEEC-CCCCEEEC
T ss_pred CEEEEECCCceeEEEECCcCCCCCEEE-EeeEEEEC
Confidence 577889999999999999999999998 55544443
No 42
>3ep0_A PR domain zinc finger protein 12; PR domain-containing protein 12, structural genomics, structural genomics consortium, SGC, DNA-binding; 2.10A {Homo sapiens}
Probab=85.25 E-value=0.64 Score=42.07 Aligned_cols=37 Identities=14% Similarity=0.112 Sum_probs=26.7
Q ss_pred ccccCCCC---CCceeeeeCCeEEEEe------cCCeeeeeccCCCC
Q psy6242 255 CLMEHNCL---PNAKHSNMMQSKLFVF------RDTHISTMYTNALW 292 (541)
Q Consensus 255 Sl~NHSC~---PN~~~~f~~~~~i~vr------~GeEItisY~d~~~ 292 (541)
-++||+|. +|+...-.++ +|.++ +||||++-|.+.+.
T Consensus 103 R~Vn~A~~~~eqNl~a~q~~~-~I~~~a~RdI~pGeELlvwYg~~y~ 148 (170)
T 3ep0_A 103 TYIKCARNEQEQNLEVVQIGT-SIFYKAIEMIPPDQELLVWYGNSHN 148 (170)
T ss_dssp GGCEECSSTTTCCEEEEEETT-EEEEEESSCBCTTCBCEEEECC---
T ss_pred eeEEecCCcccCCeeeEEECC-EEEEEECcCcCCCCEEEEeeCHHHH
Confidence 46799997 8987665553 56544 99999999998763
No 43
>3ope_A Probable histone-lysine N-methyltransferase ASH1L; SET, nucleus; HET: SAM; 2.90A {Homo sapiens}
Probab=75.60 E-value=1.1 Score=42.38 Aligned_cols=35 Identities=17% Similarity=0.034 Sum_probs=30.4
Q ss_pred CccccCCcccchhhccccCCCCCccccccCCeeec
Q psy6242 55 PYEIKSSPLLGRYLQATLDLHPGDRIARESPLIVG 89 (541)
Q Consensus 55 ~~~i~~s~~~GR~l~A~~~i~~Ge~I~~e~plv~~ 89 (541)
.+++..++.+|+|++|+++|++|++|......++.
T Consensus 75 ~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi~ 109 (222)
T 3ope_A 75 CLERFRAEEKGWGIRTKEPLKAGQFIIEYLGEVVS 109 (222)
T ss_dssp CCEEEECTTSSEEEECSSCBCTTCEEEECCSEEEC
T ss_pred cEEEEEcCCCceEEEECceECCCCEEEEecceecC
Confidence 47888899999999999999999999887776653
No 44
>3dal_A PR domain zinc finger protein 1; methyltransferase, PRDM1, structural genomics, structural genomics consortium, SGC, DNA-binding, metal-binding; 1.65A {Homo sapiens}
Probab=74.71 E-value=1.9 Score=39.87 Aligned_cols=37 Identities=5% Similarity=0.166 Sum_probs=28.1
Q ss_pred cccccCCCC---CCceeeeeCCeEEEEe------cCCeeeeeccCCC
Q psy6242 254 ICLMEHNCL---PNAKHSNMMQSKLFVF------RDTHISTMYTNAL 291 (541)
Q Consensus 254 ~Sl~NHSC~---PN~~~~f~~~~~i~vr------~GeEItisY~d~~ 291 (541)
+-++||+|. +|+...-.++ +|.++ +||||++-|.+.+
T Consensus 132 mRfVn~A~~~~eqNl~a~q~~~-~I~y~a~RdI~pGeELlvwYg~~Y 177 (196)
T 3dal_A 132 MRYVNPAHSPREQNLAACQNGM-NIYFYTIKPIPANQELLVWYCRDF 177 (196)
T ss_dssp GGGCEECSSTTTCCEEEEEETT-EEEEEESSCBCTTCBCEEEECHHH
T ss_pred EEeEEecCCcccCCcEEEEECC-EEEEEECcccCCCCEEEEecCHHH
Confidence 457899997 7987766553 56544 9999999998654
No 45
>3f9x_A Histone-lysine N-methyltransferase SETD8; methyltransferase, SET, lysine, alternative splicing, cell cycle, cell division, chromatin regulator, chromosomal protein, coiled coil; HET: MLY SAH; 1.25A {Homo sapiens} PDB: 3f9w_A* 3f9y_A* 3f9z_A* 1zkk_A* 4ij8_A* 2bqz_A*
Probab=69.02 E-value=1.4 Score=39.40 Aligned_cols=34 Identities=21% Similarity=0.136 Sum_probs=30.2
Q ss_pred CccccCCcccchhhccccCCCCCccccccCCeee
Q psy6242 55 PYEIKSSPLLGRYLQATLDLHPGDRIARESPLIV 88 (541)
Q Consensus 55 ~~~i~~s~~~GR~l~A~~~i~~Ge~I~~e~plv~ 88 (541)
.+++..++.+|+|++|+++|++|++|......++
T Consensus 31 ~l~v~~~~~kG~Gl~A~~~I~~G~~I~ey~Gevi 64 (166)
T 3f9x_A 31 GMKIDLIDGKGRGVIATKQFSRGDFVVEYHGDLI 64 (166)
T ss_dssp TEEEEEETTTEEEEEESSCBCTTCEEEECCSEEE
T ss_pred CeEEEECCCceeEEEECCCcCCCCEEEEeeceEc
Confidence 7889999999999999999999999987766554
No 46
>3ooi_A Histone-lysine N-methyltransferase, H3 lysine-36 lysine-20 specific; SET domain, S-adenosyl-L methionine; HET: SAM; 1.75A {Homo sapiens}
Probab=68.35 E-value=2.8 Score=39.72 Aligned_cols=34 Identities=18% Similarity=0.182 Sum_probs=29.3
Q ss_pred CccccCCcccchhhccccCCCCCccccccCCeee
Q psy6242 55 PYEIKSSPLLGRYLQATLDLHPGDRIARESPLIV 88 (541)
Q Consensus 55 ~~~i~~s~~~GR~l~A~~~i~~Ge~I~~e~plv~ 88 (541)
.++|..++.+|+|++|+++|++|++|......++
T Consensus 93 ~lev~~t~~kG~Gl~A~~~I~~G~~I~ey~Gevi 126 (232)
T 3ooi_A 93 EVEIFRTLQRGWGLRTKTDIKKGEFVNEYVGELI 126 (232)
T ss_dssp CEEEEECSSSSEEEEESSCBCTTCEEEECCEEEE
T ss_pred cEEEEEcCCceeEEEECceecCCceeeEeeeecc
Confidence 6888899999999999999999999977655544
No 47
>3ihx_A PR domain zinc finger protein 10; PRDM10, methyltransferase, structural genomics, structural G consortium, SGC, DNA-binding, metal-binding, nucleus; 2.50A {Homo sapiens}
Probab=66.97 E-value=3.4 Score=36.48 Aligned_cols=37 Identities=5% Similarity=0.095 Sum_probs=28.3
Q ss_pred cccccCCCC---CCceeeeeCCeEEEEe------cCCeeeeeccCCC
Q psy6242 254 ICLMEHNCL---PNAKHSNMMQSKLFVF------RDTHISTMYTNAL 291 (541)
Q Consensus 254 ~Sl~NHSC~---PN~~~~f~~~~~i~vr------~GeEItisY~d~~ 291 (541)
+.++||+|. +|+...-.++ +|.++ +||||++-|.+.+
T Consensus 97 mr~vn~a~~~~eqNl~a~q~~~-~I~~~~~r~I~pGeELlv~Y~~~y 142 (152)
T 3ihx_A 97 MMFVRPAQNHLEQNLVAYQYGH-HVYYTTIKNVEPKQELKVWYAASY 142 (152)
T ss_dssp GGGCCBCCSTTTCCEEEEECSS-SEEEEESSCBCTTCBCCEEECHHH
T ss_pred eeeeeccCCccCCCcEEEEeCC-eEEEEEeeecCCCCEEEEechHHH
Confidence 467999998 7888766553 45443 9999999998654
No 48
>2lur_A Kalata; beta hairpin, plant protein; NMR {Synthetic}
Probab=62.42 E-value=1 Score=26.79 Aligned_cols=7 Identities=57% Similarity=2.019 Sum_probs=6.1
Q ss_pred CCCCccc
Q psy6242 476 CFWPACS 482 (541)
Q Consensus 476 C~wplC~ 482 (541)
|.||+|+
T Consensus 17 cswpvcg 23 (29)
T 2lur_A 17 CSWPVCG 23 (29)
T ss_dssp EETTEEE
T ss_pred ecCcccc
Confidence 7899996
No 49
>3ray_A PR domain-containing protein 11; structural genomics consortium, SGC, histone methylation, Zn transcriptional regulation, chromatin, transcription; 1.73A {Homo sapiens}
Probab=58.00 E-value=6.6 Score=37.24 Aligned_cols=38 Identities=5% Similarity=0.059 Sum_probs=28.8
Q ss_pred cccccCCCC---CCceeeeeCCeEEEEe------cCCeeeeeccCCCC
Q psy6242 254 ICLMEHNCL---PNAKHSNMMQSKLFVF------RDTHISTMYTNALW 292 (541)
Q Consensus 254 ~Sl~NHSC~---PN~~~~f~~~~~i~vr------~GeEItisY~d~~~ 292 (541)
+.++||+|. +|+...-.++ +|.++ +||||++-|.+.++
T Consensus 141 mRfVn~Ar~~~EqNL~A~q~~~-~Iyy~a~RdI~pGeELlVwYg~~Y~ 187 (237)
T 3ray_A 141 MRYVVISREEREQNLLAFQHSE-RIYFRACRDIRPGEWLRVWYSEDYM 187 (237)
T ss_dssp GGGCEECCCTTTCCEEEEEETT-EEEEEESSCBCTTCBCEEEECHHHH
T ss_pred eeEEEcCCCcccccceeEEeCC-EEEEEEccccCCCCEEEEeeCHHHH
Confidence 347899996 6887766654 56554 99999999997763
No 50
>2w5y_A Histone-lysine N-methyltransferase HRX; transcription regulation, chromosomal rearrangement, protein lysine methyltransferase, proto-oncogene; HET: SAH; 2.00A {Homo sapiens} PDB: 2w5z_A*
Probab=56.69 E-value=3.4 Score=38.01 Aligned_cols=34 Identities=18% Similarity=0.325 Sum_probs=28.5
Q ss_pred CccccCCcccchhhccccCCCCCccccccCCeee
Q psy6242 55 PYEIKSSPLLGRYLQATLDLHPGDRIARESPLIV 88 (541)
Q Consensus 55 ~~~i~~s~~~GR~l~A~~~i~~Ge~I~~e~plv~ 88 (541)
.++|..++.+|+|++|+++|++|++|..-..-++
T Consensus 53 ~l~V~~s~~~G~GlfA~~~I~~G~~I~EY~Gevi 86 (192)
T 2w5y_A 53 AVGVYRSPIHGRGLFCKRNIDAGEMVIEYAGNVI 86 (192)
T ss_dssp HEEEEECSSSSEEEEESSCBCTTCEEEECCSEEE
T ss_pred cEEEEEcCCceeEEEECcccCCCCEEEEeeeeEe
Confidence 5778888999999999999999999986555443
No 51
>3h6l_A Histone-lysine N-methyltransferase SETD2; SET domain-containing protein 2, S-adenos methionine, structural genomics, structural genomics consor SGC; HET: SAM; 1.99A {Homo sapiens} PDB: 4fmu_A* 4h12_A*
Probab=49.89 E-value=5.2 Score=39.02 Aligned_cols=34 Identities=18% Similarity=0.103 Sum_probs=29.8
Q ss_pred CccccCCcccchhhccccCCCCCccccccCCeee
Q psy6242 55 PYEIKSSPLLGRYLQATLDLHPGDRIARESPLIV 88 (541)
Q Consensus 55 ~~~i~~s~~~GR~l~A~~~i~~Ge~I~~e~plv~ 88 (541)
.++|..++.+|+|++|+++|++|++|......++
T Consensus 118 ~leV~~t~~kG~Gl~A~~~I~~G~~I~EY~Gevi 151 (278)
T 3h6l_A 118 DVEVILTEKKGWGLRAAKDLPSNTFVLEYCGEVL 151 (278)
T ss_dssp CEEEEECSSSCEEEEESSCBCTTCEEEECCCEEE
T ss_pred CEEEEEcCCCceEEEeCCccCCCCEeEEeeeeec
Confidence 6788889999999999999999999987766554
No 52
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=47.26 E-value=27 Score=32.68 Aligned_cols=40 Identities=23% Similarity=0.498 Sum_probs=29.5
Q ss_pred eeccccccCcccccccccccCCCCCCCCCCCCCCCCCccccccC
Q psy6242 443 VMSPNLKATDEPICLGCHKPLNPNLADNARCPRCFWPACSARCS 486 (541)
Q Consensus 443 ~~~Pg~~~~~~~~c~ec~~~l~~~~~~~~~C~~C~wplC~~~C~ 486 (541)
...|.|. .+..|..|..+..... ..+-|..||.-+|+ .|.
T Consensus 156 ~~~p~W~--~~~~C~~C~~~F~~~~-RrhHCR~CG~v~C~-~Cs 195 (226)
T 3zyq_A 156 ERAPDWV--DAEECHRCRVQFGVMT-RKHHCRACGQIFCG-KCS 195 (226)
T ss_dssp CCCCCCC--CCSBCTTTCCBCBTTB-CCEECTTTCCEECT-TTC
T ss_pred ccccccc--cCCCCcCcCCCCCccc-cccccCCCcCEeCh-hhc
Confidence 4467776 4568999998776432 24679999999996 585
No 53
>3hna_A Histone-lysine N-methyltransferase, H3 lysine-9 specific 5; EHMT1, structural genomics, SGC, structural genomics consortium, alternative splicing, ANK repeat; HET: MLZ SAH; 1.50A {Homo sapiens} PDB: 2rfi_A* 2igq_A* 3mo0_A* 3mo2_A* 3mo5_A* 3sw9_A* 3swc_A* 4h4h_A* 4i51_A* 3fpd_A* 3k5k_A* 3nni_A* 3rjw_A* 2o8j_A*
Probab=44.43 E-value=6.3 Score=38.58 Aligned_cols=34 Identities=12% Similarity=0.221 Sum_probs=29.0
Q ss_pred CccccCCcccchhhccccCCCCCccccccCCeee
Q psy6242 55 PYEIKSSPLLGRYLQATLDLHPGDRIARESPLIV 88 (541)
Q Consensus 55 ~~~i~~s~~~GR~l~A~~~i~~Ge~I~~e~plv~ 88 (541)
.+++..++.+|+|++|+++|++|++|......++
T Consensus 148 ~l~v~~t~~kG~Gv~A~~~I~~G~~I~eY~Gevi 181 (287)
T 3hna_A 148 RLQLYRTRDMGWGVRSLQDIPPGTFVCEYVGELI 181 (287)
T ss_dssp CEEEEECSSSSEEEEESSCBCTTCEEEEECEEEE
T ss_pred cEEEEEcCCCceEEEeCcccCCCCEEEEeeeEEc
Confidence 6777888999999999999999999987665554
No 54
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=36.05 E-value=14 Score=27.06 Aligned_cols=31 Identities=26% Similarity=0.614 Sum_probs=23.7
Q ss_pred cccccccCCCCCCCCCCcCCCCCCccccChhhhc
Q psy6242 97 PICLGCHKPLNPNLADNARCPRCFWPACSARCSG 130 (541)
Q Consensus 97 ~~C~~C~~~~~~~~~~~~~C~~C~~~yCS~~C~~ 130 (541)
..|.+|..+... ...++|++|+..||- +|-.
T Consensus 16 ~~C~~C~~~~~~--~~~y~C~~C~~~FC~-dCD~ 46 (59)
T 1z60_A 16 RFCYGCQGELKD--QHVYVCAVCQNVFCV-DCDV 46 (59)
T ss_dssp CEETTTTEECTT--SEEECCTTTTCCBCH-HHHH
T ss_pred CcccccCcccCC--CccEECCccCcCccc-chhH
Confidence 579999998853 223789999999994 5744
No 55
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=35.56 E-value=18 Score=25.07 Aligned_cols=31 Identities=13% Similarity=0.429 Sum_probs=17.1
Q ss_pred cccccccCCCCCce-eeecCCCCCCCCCcccCcCcCccCH
Q psy6242 326 AMKCLNEHKDQGDC-WILPVNPLDNDSDWTCGSCSARLNA 364 (541)
Q Consensus 326 ~~~C~~~~~~~C~g-~~lp~~~~~~~~~w~C~~C~~~~~~ 364 (541)
.+.||. |++ .+.. ++ ....+.|..||..+..
T Consensus 5 ~~~CP~-----C~~~~l~~-d~--~~gelvC~~CG~v~~e 36 (50)
T 1pft_A 5 QKVCPA-----CESAELIY-DP--ERGEIVCAKCGYVIEE 36 (50)
T ss_dssp CCSCTT-----TSCCCEEE-ET--TTTEEEESSSCCBCCC
T ss_pred cEeCcC-----CCCcceEE-cC--CCCeEECcccCCcccc
Confidence 356776 765 3322 11 1345777777776653
No 56
>3smt_A Histone-lysine N-methyltransferase SETD3; histone methyltransferase, histone modification, LYSI translational modification, structural genomics; HET: SAM; 2.04A {Homo sapiens}
Probab=33.57 E-value=9.3 Score=40.44 Aligned_cols=41 Identities=17% Similarity=0.178 Sum_probs=30.8
Q ss_pred hhcccc-cccCCCCCCccccCCcccchhhccccCCCCCcccccc
Q psy6242 41 KEHWKL-HKPKCKKLPYEIKSSPLLGRYLQATLDLHPGDRIARE 83 (541)
Q Consensus 41 ~~~w~~-Hk~~C~~~~~~i~~s~~~GR~l~A~~~i~~Ge~I~~e 83 (541)
-..|-. |.-... .+++...+..|||++|+++|++|++|+.-
T Consensus 81 ll~W~~~~G~~~~--~v~i~~~~~~GrGl~A~~dI~~ge~ll~I 122 (497)
T 3smt_A 81 LMKWASENGASVE--GFEMVNFKEEGFGLRATRDIKAEELFLWV 122 (497)
T ss_dssp HHHHHHHTTCCCT--TEEEEEETTTEEEEEESSCBCTTCEEEEE
T ss_pred HHHHHHHCCCCcc--ceEEEEcCCCccEEEEcccCCCCCEEEEc
Confidence 346755 444444 67777778899999999999999987643
No 57
>3bo5_A Histone-lysine N-methyltransferase setmar; SET domain, chromati regulator, DNA damage, DNA repair, DNA-binding, nucleus, ST genomics; HET: SAH; 1.59A {Homo sapiens}
Probab=31.81 E-value=12 Score=36.54 Aligned_cols=33 Identities=9% Similarity=0.059 Sum_probs=27.1
Q ss_pred CccccCCcccchhhccccCCCCCccccccCCee
Q psy6242 55 PYEIKSSPLLGRYLQATLDLHPGDRIARESPLI 87 (541)
Q Consensus 55 ~~~i~~s~~~GR~l~A~~~i~~Ge~I~~e~plv 87 (541)
.++|..++.+|+|++|+++|++|++|..-..-+
T Consensus 127 ~l~V~~s~~~G~Gl~A~~~I~~G~~I~EY~Gev 159 (290)
T 3bo5_A 127 HFQVFKTHKKGWGLRTLEFIPKGRFVCEYAGEV 159 (290)
T ss_dssp CEEEEECSSSSEEEEESSCBCTTCEEEECCEEE
T ss_pred cEEEEEcCCCcceEeECCccCCCCEEEEEeeEE
Confidence 567778899999999999999999987544333
No 58
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=31.69 E-value=33 Score=31.84 Aligned_cols=39 Identities=23% Similarity=0.588 Sum_probs=28.7
Q ss_pred eccccccCcccccccccccCCCCCCCCCCCCCCCCCccccccC
Q psy6242 444 MSPNLKATDEPICLGCHKPLNPNLADNARCPRCFWPACSARCS 486 (541)
Q Consensus 444 ~~Pg~~~~~~~~c~ec~~~l~~~~~~~~~C~~C~wplC~~~C~ 486 (541)
..|.|. ....|..|..+..... ..+.|..||.-+|+ .|.
T Consensus 154 ~~~~W~--~~~~C~~C~~~F~~~~-rrhhCr~CG~v~C~-~Cs 192 (220)
T 1dvp_A 154 TAPNWA--DGRVCHRCRVEFTFTN-RKHHCRNCGQVFCG-QCT 192 (220)
T ss_dssp CCCCCC--CCSBCTTTCCBCCSSS-CCEECTTTCCEECS-TTS
T ss_pred ccccCC--CCCccCCCCCccCCcc-cccccCCcCCEECh-HHh
Confidence 367776 4578999988765432 24679999999997 585
No 59
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=31.25 E-value=36 Score=25.95 Aligned_cols=25 Identities=32% Similarity=0.786 Sum_probs=20.6
Q ss_pred cccccccCCCCCCCCCCcCCCCCCccccC
Q psy6242 97 PICLGCHKPLNPNLADNARCPRCFWPACS 125 (541)
Q Consensus 97 ~~C~~C~~~~~~~~~~~~~C~~C~~~yCS 125 (541)
..|..|-+.+.- ..+.| +|+..||+
T Consensus 26 ~RC~~C~kkvgL---~~f~C-rCg~~FCs 50 (74)
T 1wfp_A 26 TRCLSCNKKVGV---TGFKC-RCGSTFCG 50 (74)
T ss_dssp CBCSSSCCBCTT---TCEEC-TTSCEECT
T ss_pred ccchhhcCcccc---cceEe-ccCCEecc
Confidence 789999988763 24789 89999997
No 60
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=30.25 E-value=34 Score=25.33 Aligned_cols=25 Identities=28% Similarity=0.574 Sum_probs=20.3
Q ss_pred cccccccCCCCCCCCCCcCCCCCCccccC
Q psy6242 97 PICLGCHKPLNPNLADNARCPRCFWPACS 125 (541)
Q Consensus 97 ~~C~~C~~~~~~~~~~~~~C~~C~~~yCS 125 (541)
..|..|-+.+.- ..+.| +|+..||+
T Consensus 16 ~rC~~C~kkvgl---~~f~C-rCg~~FC~ 40 (64)
T 1wfh_A 16 NRCTVCRKRVGL---TGFMC-RCGTTFCG 40 (64)
T ss_dssp CCCTTTCCCCCT---TCEEC-SSSCEECT
T ss_pred CcChhhCCccCc---cCEEe-ecCCEecc
Confidence 789999988652 24789 79999997
No 61
>1mvh_A Cryptic LOCI regulator 4; lysine methyltransferase, CLR4, SET-domain; 2.30A {Schizosaccharomyces pombe} SCOP: b.85.7.1 PDB: 1mvx_A
Probab=29.97 E-value=18 Score=35.57 Aligned_cols=34 Identities=18% Similarity=0.063 Sum_probs=27.8
Q ss_pred CccccCCcccchhhccccCCCCCccccccCCeee
Q psy6242 55 PYEIKSSPLLGRYLQATLDLHPGDRIARESPLIV 88 (541)
Q Consensus 55 ~~~i~~s~~~GR~l~A~~~i~~Ge~I~~e~plv~ 88 (541)
.++|..++.+|+|++|+++|++|++|..-..-++
T Consensus 138 ~l~v~~t~~~G~Gv~A~~~I~kG~~I~EY~Gevi 171 (299)
T 1mvh_A 138 PLEIFKTKEKGWGVRSLRFAPAGTFITCYLGEVI 171 (299)
T ss_dssp CEEEEECSSSSEEEEESSCBCTTCEEEECCCEEE
T ss_pred cEEEEEcCCCcceEeeCceeCCCCEEEEeeeEEC
Confidence 5677788899999999999999999976554443
No 62
>1ml9_A Histone H3 methyltransferase DIM-5; adoMet-dependent methyltransferase histone H3 lysine- 9 methylation; 1.98A {Neurospora crassa} SCOP: b.85.7.1 PDB: 1peg_A*
Probab=29.25 E-value=19 Score=35.41 Aligned_cols=34 Identities=18% Similarity=0.253 Sum_probs=28.0
Q ss_pred CccccCCcccchhhccccCCCCCccccccCCeee
Q psy6242 55 PYEIKSSPLLGRYLQATLDLHPGDRIARESPLIV 88 (541)
Q Consensus 55 ~~~i~~s~~~GR~l~A~~~i~~Ge~I~~e~plv~ 88 (541)
.++|..++.+|+|++|.++|++|++|..-..-++
T Consensus 134 ~l~v~~t~~kG~Gv~A~~~I~~G~~I~EY~Gevi 167 (302)
T 1ml9_A 134 PLQIFRTKDRGWGVKCPVNIKRGQFVDRYLGEII 167 (302)
T ss_dssp CEEEEECSSSCEEEECSSCBCTTCEEEECCCEEE
T ss_pred ceEEEEcCCCceEEEECCeeCCCCEEEEEeeEEe
Confidence 5677888899999999999999999876554443
No 63
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=28.64 E-value=34 Score=25.30 Aligned_cols=26 Identities=19% Similarity=0.400 Sum_probs=17.9
Q ss_pred ccccccccccCCCCCCCCCCCCCCCC
Q psy6242 453 EPICLGCHKPLNPNLADNARCPRCFW 478 (541)
Q Consensus 453 ~~~c~ec~~~l~~~~~~~~~C~~C~w 478 (541)
.-+|.+|...+.....+..+|+.||.
T Consensus 21 ~Y~C~~Cg~~~~l~~~~~iRC~~CG~ 46 (63)
T 3h0g_L 21 IYLCADCGARNTIQAKEVIRCRECGH 46 (63)
T ss_dssp CCBCSSSCCBCCCCSSSCCCCSSSCC
T ss_pred EEECCCCCCeeecCCCCceECCCCCc
Confidence 35677887776655444578888885
No 64
>1x4w_A Hypothetical protein FLJ13222; ZF-AN1 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.37 E-value=25 Score=26.34 Aligned_cols=27 Identities=30% Similarity=0.735 Sum_probs=21.0
Q ss_pred cccccccccccCC-cC-----CCCccCcccccCCc
Q psy6242 9 DEELMRCAVCRET-AL-----HKCSACKEVAYCGK 37 (541)
Q Consensus 9 ~~~~~~C~~C~~~-~~-----~~Cs~C~~v~YCs~ 37 (541)
...+++|..|++. .+ ..| +|..+ ||+.
T Consensus 12 ~~~~~rC~~C~kk~gL~~~egf~C-rCg~~-FC~~ 44 (67)
T 1x4w_A 12 QKSRRRCFQCQTKLELVQQELGSC-RCGYV-FCML 44 (67)
T ss_dssp CSCTTBCSSSCCBCCHHHHHHHCC-SSSCC-CCTT
T ss_pred CccCCcchhhCCeecccccCceEe-cCCCE-ehhc
Confidence 3567899999987 22 589 99887 8887
No 65
>2f69_A Histone-lysine N-methyltransferase, H3 lysine-4 specific SET7; SET domain, protein lysine methyltransferase, enzyme- peptide-adohcy complex; HET: MLZ SAH; 1.30A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 3m53_A* 3m55_A* 3m54_A* 3m56_A* 3m58_A* 3m57_A* 3m59_A* 3m5a_A* 1xqh_A* 4e47_A* 1n6a_A* 1o9s_A* 3cbp_A* 3cbm_A* 3cbo_A* 3os5_A*
Probab=28.15 E-value=17 Score=34.95 Aligned_cols=34 Identities=12% Similarity=0.118 Sum_probs=26.7
Q ss_pred CccccCCccc--chhhccccCCCCCccccccCCeee
Q psy6242 55 PYEIKSSPLL--GRYLQATLDLHPGDRIARESPLIV 88 (541)
Q Consensus 55 ~~~i~~s~~~--GR~l~A~~~i~~Ge~I~~e~plv~ 88 (541)
.+.+..++.. |++++|+++|++|++|......++
T Consensus 110 ~~~v~~S~i~~kG~GvfA~~~I~~G~~I~eY~Gevi 145 (261)
T 2f69_A 110 RVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRI 145 (261)
T ss_dssp TEEEEECSSTTCCEEEEESSCBCTTCEEEEECCEEE
T ss_pred eEEEEecCCCCCceEEEECcccCCCCEEEEEeeEEe
Confidence 4566767655 999999999999999977655543
No 66
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=27.76 E-value=32 Score=24.87 Aligned_cols=37 Identities=14% Similarity=0.257 Sum_probs=23.9
Q ss_pred cccccccccccccCCCCCce-eeecCCCCCCCCCcccCcCcCccCH
Q psy6242 320 LGTYFSAMKCLNEHKDQGDC-WILPVNPLDNDSDWTCGSCSARLNA 364 (541)
Q Consensus 320 ~~~~l~~~~C~~~~~~~C~g-~~lp~~~~~~~~~w~C~~C~~~~~~ 364 (541)
.+.++..++||. |++ .+.- + .....+.|..||.++..
T Consensus 5 ~~~ll~~~~Cp~-----C~~~~lv~-D--~~~ge~vC~~CGlVl~e 42 (58)
T 1dl6_A 5 RLDALPRVTCPN-----HPDAILVE-D--YRAGDMICPECGLVVGD 42 (58)
T ss_dssp SCCCCSCCSBTT-----BSSSCCEE-C--SSSCCEECTTTCCEECC
T ss_pred hhhccccccCcC-----CCCCceeE-e--CCCCeEEeCCCCCEEec
Confidence 345666778998 875 3322 2 13467899999988753
No 67
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=27.48 E-value=27 Score=25.86 Aligned_cols=25 Identities=24% Similarity=0.680 Sum_probs=20.4
Q ss_pred cccccccCCCCCCCCCCcCCCCCCccccC
Q psy6242 97 PICLGCHKPLNPNLADNARCPRCFWPACS 125 (541)
Q Consensus 97 ~~C~~C~~~~~~~~~~~~~C~~C~~~yCS 125 (541)
..|..|-+.+.- ..+.| +|+..||+
T Consensus 16 ~rC~~C~kkvgl---~~f~C-rCg~~FC~ 40 (64)
T 1wg2_A 16 NRCFSCNKKVGV---MGFKC-KCGSTFCG 40 (64)
T ss_dssp CSCTTTCCCCTT---SCEEC-TTSCEECS
T ss_pred CcChhhCCcccc---cCeEe-ecCCEecc
Confidence 789999988652 14789 89999997
No 68
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=26.32 E-value=37 Score=25.60 Aligned_cols=32 Identities=22% Similarity=0.436 Sum_probs=23.6
Q ss_pred cccccccCCCCCCCCCCcCCCCCCccccChhhhc
Q psy6242 97 PICLGCHKPLNPNLADNARCPRCFWPACSARCSG 130 (541)
Q Consensus 97 ~~C~~C~~~~~~~~~~~~~C~~C~~~yCS~~C~~ 130 (541)
..|..|.+..... .....|..||.+||+ +|..
T Consensus 12 ~~C~~C~~~F~~~-~RrHHCR~CG~v~C~-~Cs~ 43 (73)
T 1vfy_A 12 DACMICSKKFSLL-NRKHHCRSCGGVFCQ-EHSS 43 (73)
T ss_dssp SBCTTTCCBCBTT-BCCEECTTTCCEECG-GGSC
T ss_pred CcccCCCCccCCc-cccccCCCCCEEEcc-cccC
Confidence 5899999877532 234579999999997 4754
No 69
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=25.96 E-value=61 Score=25.42 Aligned_cols=26 Identities=27% Similarity=0.512 Sum_probs=20.5
Q ss_pred cccccccCCCCCCCCCCcCCCCCCccccC
Q psy6242 97 PICLGCHKPLNPNLADNARCPRCFWPACS 125 (541)
Q Consensus 97 ~~C~~C~~~~~~~~~~~~~C~~C~~~yCS 125 (541)
..|..|-+.+.- ...+.|. |+..||+
T Consensus 26 ~rC~~C~kkvgl--~~~f~Cr-Cg~~FC~ 51 (85)
T 1wff_A 26 KHCFLCGKKTGL--ATSFECR-CGNNFCA 51 (85)
T ss_dssp CBCSSSCCBCSS--SSCEECT-TCCEECT
T ss_pred ccchhhCCeecc--cCCeEcC-CCCEecc
Confidence 799999988762 1257894 9999997
No 70
>1h3i_A Histone H3 lysine 4 specific methyltransferase; 2.1A {Homo sapiens} SCOP: b.76.2.1 b.85.7.1 PDB: 1mt6_A* 1n6c_A* 1muf_A
Probab=25.15 E-value=20 Score=34.80 Aligned_cols=34 Identities=9% Similarity=0.057 Sum_probs=25.4
Q ss_pred CccccCCcccc--hhhccccCCCCCccccccCCeee
Q psy6242 55 PYEIKSSPLLG--RYLQATLDLHPGDRIARESPLIV 88 (541)
Q Consensus 55 ~~~i~~s~~~G--R~l~A~~~i~~Ge~I~~e~plv~ 88 (541)
.+.+..|+..| ++|+|+++|++|++|......++
T Consensus 164 ~~~v~~S~i~GkG~Gvfa~~~I~~G~~I~ey~Ge~i 199 (293)
T 1h3i_A 164 RVYVAESLISSAGEGLFSKVAVGPNTVMSFYNGVRI 199 (293)
T ss_dssp TEEEEECSSSSSSEEEEESSCBCTTCEEEEECCEEE
T ss_pred eEEEeeeecCCCcceEEECCcCCCCCEEEEeccEEc
Confidence 34556666655 99999999999999976555443
No 71
>3s8p_A Histone-lysine N-methyltransferase SUV420H1; SET domain, histone methyltransferase, transcription regulat histone lysine, SAM, methylation, nucleus; HET: MSE SAM; 1.85A {Homo sapiens}
Probab=23.91 E-value=21 Score=34.57 Aligned_cols=23 Identities=26% Similarity=0.199 Sum_probs=19.7
Q ss_pred CcccchhhccccCCCCCcccccc
Q psy6242 61 SPLLGRYLQATLDLHPGDRIARE 83 (541)
Q Consensus 61 s~~~GR~l~A~~~i~~Ge~I~~e 83 (541)
++.+|+|++|+++|++|+.|..-
T Consensus 143 ~e~~G~GlfA~~~I~kGe~I~EY 165 (273)
T 3s8p_A 143 SEQNGAKIVATKEWKRNDKIELL 165 (273)
T ss_dssp TCSSEEEEEESSCBCTTCEEEEE
T ss_pred ecCCCceEEECCccCCCCEEEEE
Confidence 45689999999999999998743
No 72
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=23.72 E-value=26 Score=27.39 Aligned_cols=35 Identities=26% Similarity=0.545 Sum_probs=26.6
Q ss_pred CcCCCCCCccccChhhhccccCCCCHh-hhhhhhhcch
Q psy6242 113 NARCPRCFWPACSARCSGLSDAHTHAP-ECAILKLGCE 149 (541)
Q Consensus 113 ~~~C~~C~~~yCS~~C~~~~~~~~H~~-EC~~l~~~~~ 149 (541)
.+.|+.|+..||. .|.. .|...|.. -|..++.|..
T Consensus 43 ~v~C~~C~~~FC~-~C~~-~w~~~H~~~sC~~~~~w~~ 78 (86)
T 2ct7_A 43 EATCPQCHQTFCV-RCKR-QWEEQHRGRSCEDFQNWKR 78 (86)
T ss_dssp CEECTTTCCEECS-SSCS-BCCTTTTTSCHHHHHHHHH
T ss_pred ceEeCCCCCcccc-ccCC-chhhcCCCCChHHHHHHHH
Confidence 4789999999996 5986 55455754 5998888764
No 73
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=23.28 E-value=27 Score=29.31 Aligned_cols=33 Identities=30% Similarity=0.667 Sum_probs=24.0
Q ss_pred CcccccccCCCCCCCCCCcCCCCCCccccChhhhc
Q psy6242 96 EPICLGCHKPLNPNLADNARCPRCFWPACSARCSG 130 (541)
Q Consensus 96 ~~~C~~C~~~~~~~~~~~~~C~~C~~~yCS~~C~~ 130 (541)
...|..|....... .....|..||.+||+ .|..
T Consensus 19 ~~~C~~C~~~Fs~~-~RkHHCR~CG~ifC~-~Cs~ 51 (120)
T 1y02_A 19 EPSCKSCGAHFANT-ARKQTCLDCKKNFCM-TCSS 51 (120)
T ss_dssp -CCCTTTCCCCSSG-GGCEECTTTCCEECG-GGEE
T ss_pred cCcccCcCCccccc-cccccCCCCCCeeCH-HHhC
Confidence 37899998877531 224579999999997 5865
No 74
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=22.54 E-value=58 Score=25.72 Aligned_cols=34 Identities=26% Similarity=0.703 Sum_probs=21.9
Q ss_pred CcccccccccccCCCCCCC--CCCCCCCCCCcccccc
Q psy6242 451 TDEPICLGCHKPLNPNLAD--NARCPRCFWPACSARC 485 (541)
Q Consensus 451 ~~~~~c~ec~~~l~~~~~~--~~~C~~C~wplC~~~C 485 (541)
..+++|--|=-.+-.+..+ ..-|..|++|||.+ |
T Consensus 14 ~~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrp-C 49 (93)
T 1weo_A 14 LDGQFCEICGDQIGLTVEGDLFVACNECGFPACRP-C 49 (93)
T ss_dssp CSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHH-H
T ss_pred cCCCccccccCccccCCCCCEEEeeeccCChhhHH-H
Confidence 4567776665444333322 35699999999953 6
No 75
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=22.44 E-value=20 Score=28.06 Aligned_cols=31 Identities=16% Similarity=0.374 Sum_probs=20.2
Q ss_pred ccccccccCCCCCceeeecCCCCCCCCCcccCcCcCccC
Q psy6242 325 SAMKCLNEHKDQGDCWILPVNPLDNDSDWTCGSCSARLN 363 (541)
Q Consensus 325 ~~~~C~~~~~~~C~g~~lp~~~~~~~~~w~C~~C~~~~~ 363 (541)
..+.|+. |++..+-.. ....|.|..|+..+.
T Consensus 26 ~~y~Cp~-----CG~~~v~r~---atGiW~C~~Cg~~~a 56 (83)
T 1vq8_Z 26 EDHACPN-----CGEDRVDRQ---GTGIWQCSYCDYKFT 56 (83)
T ss_dssp SCEECSS-----SCCEEEEEE---ETTEEEETTTCCEEE
T ss_pred ccCcCCC-----CCCcceecc---CCCeEECCCCCCEec
Confidence 3567887 885432111 135899999999854
No 76
>2r3a_A Histone-lysine N-methyltransferase SUV39H2; histone H3-K9 methyltransferase 2, H3 lysine-9 specific 2, alternative splicing, cell cycle; HET: SAM; 2.00A {Homo sapiens}
Probab=22.18 E-value=34 Score=33.49 Aligned_cols=33 Identities=9% Similarity=-0.045 Sum_probs=24.6
Q ss_pred ccccC-CcccchhhccccCCCCCccccccCCeee
Q psy6242 56 YEIKS-SPLLGRYLQATLDLHPGDRIARESPLIV 88 (541)
Q Consensus 56 ~~i~~-s~~~GR~l~A~~~i~~Ge~I~~e~plv~ 88 (541)
+++.. ++.+|+|++|.++|++|++|..-..-++
T Consensus 142 l~vfrt~~~kG~Gl~A~~~I~~G~~I~EY~Gevi 175 (300)
T 2r3a_A 142 LCIFRTSNGRGWGVKTLVKIKRMSFVMEYVGEVI 175 (300)
T ss_dssp EEEEECSSSCCEEEEESSCBCTTCEEEEECCEEE
T ss_pred EEEEEeCCCceEEEEeCccccCCCEeEEEeeEEe
Confidence 34443 4579999999999999999876554443
No 77
>2con_A RUH-035 protein, NIN one binding protein; ribosome, RNA binding protein, unknown function, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.15.1
Probab=21.19 E-value=39 Score=26.17 Aligned_cols=23 Identities=26% Similarity=0.537 Sum_probs=18.1
Q ss_pred cccccccCCCCCCCCCCcCCCCCCc
Q psy6242 97 PICLGCHKPLNPNLADNARCPRCFW 121 (541)
Q Consensus 97 ~~C~~C~~~~~~~~~~~~~C~~C~~ 121 (541)
..|+.||..... ....-|+.|+.
T Consensus 16 LrC~aCf~~t~~--~~k~FCp~CGn 38 (79)
T 2con_A 16 LRCHGCFKTTSD--MNRVFCGHCGN 38 (79)
T ss_dssp EECSSSCCEESC--SSCCSCSSSCC
T ss_pred eEecccceECCC--cccccccccCc
Confidence 689999998764 34678999985
No 78
>1lv3_A Hypothetical protein YACG; zinc finger, rubredoxin knuckle, C4 tetrahedral Zn+2, antiparallel beta strand and alpha helix, NESG project; NMR {Escherichia coli} SCOP: g.39.1.9
Probab=20.75 E-value=38 Score=25.44 Aligned_cols=35 Identities=17% Similarity=0.300 Sum_probs=23.5
Q ss_pred cccccccccCCcCCCCccCcccccCCchhhhhcccc
Q psy6242 11 ELMRCAVCRETALHKCSACKEVAYCGKQHQKEHWKL 46 (541)
Q Consensus 11 ~~~~C~~C~~~~~~~Cs~C~~v~YCs~~hQ~~~w~~ 46 (541)
....|.+||++..-+ ..=..+-|||+.|+..|--.
T Consensus 8 ~~~~CP~Cgkp~~W~-~~~~~rPFCSeRCr~iDLg~ 42 (68)
T 1lv3_A 8 ITVNCPTCGKTVVWG-EISPFRPFCSKRCQLIDLGE 42 (68)
T ss_dssp CEEECTTTCCEEECS-SSSSCCSSSSHHHHHHHHSC
T ss_pred CcCcCCCCCCccccc-ccCCCCcccCHHHHhhhHHH
Confidence 346799999874311 01235679999999987653
No 79
>1wvo_A Sialic acid synthase; antifreeze protein like domain, N-acetylneuraminic acid phosphate synthase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.51 E-value=32 Score=26.52 Aligned_cols=22 Identities=9% Similarity=0.071 Sum_probs=18.2
Q ss_pred ccchhhccccCCCCCccccccC
Q psy6242 63 LLGRYLQATLDLHPGDRIARES 84 (541)
Q Consensus 63 ~~GR~l~A~~~i~~Ge~I~~e~ 84 (541)
..+|.++|.++|++|++|-.+.
T Consensus 4 ~~rrslvA~rdI~~Gevit~~d 25 (79)
T 1wvo_A 4 GSSGSVVAKVKIPEGTILTMDM 25 (79)
T ss_dssp CCCCEEEESSCBCTTCBCCGGG
T ss_pred cccEEEEEeCccCCCCCcCHHH
Confidence 4578899999999999986653
No 80
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=20.19 E-value=1e+02 Score=29.17 Aligned_cols=34 Identities=26% Similarity=0.596 Sum_probs=25.8
Q ss_pred eccccccCcccccccccccCCCCC-------CCCCCCCCCC
Q psy6242 444 MSPNLKATDEPICLGCHKPLNPNL-------ADNARCPRCF 477 (541)
Q Consensus 444 ~~Pg~~~~~~~~c~ec~~~l~~~~-------~~~~~C~~C~ 477 (541)
=|+|.....+-.|.|||-.|++.. .+-.+|+.||
T Consensus 189 ~g~avv~v~~~~C~GC~~~lppq~~~~i~~~~~Iv~Cp~Cg 229 (256)
T 3na7_A 189 KNTSIVTIKKQACGGCFIRLNDKIYTEVLTSGDMITCPYCG 229 (256)
T ss_dssp GGGSEEECBTTBCTTTCCBCCHHHHHHHHHSSSCEECTTTC
T ss_pred CCceEEEeeCCccCCCCeeeCHHHHHHHHCCCCEEECCCCC
Confidence 477777788899999999887421 1236899999
Done!