RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy6242
         (541 letters)



>d2dana1 g.85.1.1 (A:8-54) Zinc finger MYND domain-containing
          protein 10, ZMYND10 {Human (Homo sapiens) [TaxId:
          9606]}
          Length = 47

 Score = 55.0 bits (132), Expect = 8e-11
 Identities = 17/47 (36%), Positives = 24/47 (51%)

Query: 5  IEIEDEELMRCAVCRETALHKCSACKEVAYCGKQHQKEHWKLHKPKC 51
          +E    E  RCA C   A  +CS C+   YC ++ Q +HW+ H   C
Sbjct: 1  LEAVAPERPRCAYCSAEASKRCSRCQNEWYCCRECQVKHWEKHGKTC 47


>d2dj8a1 g.85.1.1 (A:8-54) Zinc finger MYND domain-containing
          protein 2, MTG8 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 47

 Score = 53.1 bits (127), Expect = 4e-10
 Identities = 13/44 (29%), Positives = 18/44 (40%)

Query: 8  EDEELMRCAVCRETALHKCSACKEVAYCGKQHQKEHWKLHKPKC 51
          +++    C  C   A   CS C    YCG   Q + W+ H   C
Sbjct: 4  QEDSSESCWNCGRKASETCSGCNTARYCGSFCQHKDWEKHHHIC 47


>d2jw6a1 g.85.1.1 (A:503-540) Zinc finger MYND domain-containing
          protein 2, MTG8 {Human (Homo sapiens) [TaxId: 9606]}
          Length = 38

 Score = 52.7 bits (126), Expect = 5e-10
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 15 CAVCRETALHKCSACKEVAYCGKQHQKEHWKLHKPKC 51
          C  C   A+ +C+ C +V YC    Q++ WK H+  C
Sbjct: 2  CVNCGREAMSECTGCHKVNYCSTFCQRKDWKDHQHIC 38


>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas
           putida [TaxId: 303]}
          Length = 392

 Score = 27.8 bits (61), Expect = 3.7
 Identities = 8/46 (17%), Positives = 12/46 (26%)

Query: 385 NPNVKSLEEMLTKLEAMFHPHHYHCYAVKHSLIQLYGTQPGYAYTQ 430
           NP +  LE  +  LE               +       +PG     
Sbjct: 58  NPTLNLLEARMASLEGGEAGLALASGMGAITSTLWTLLRPGDEVLL 103


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.321    0.135    0.441 

Gapped
Lambda     K      H
   0.267   0.0489    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 2,073,077
Number of extensions: 100499
Number of successful extensions: 388
Number of sequences better than 10.0: 1
Number of HSP's gapped: 388
Number of HSP's successfully gapped: 37
Length of query: 541
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 451
Effective length of database: 1,171,896
Effective search space: 528525096
Effective search space used: 528525096
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.5 bits)