BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6258
(136 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54001|P4HA1_RAT Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1
PE=2 SV=2
Length = 534
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 62 GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
GN+ L ++DV GGAT+FP + +V+P+KG+AVFWYN A+ DY H+ CPV
Sbjct: 447 GNRIATWLFY-MSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPV 505
Query: 122 ALGNKW 127
+GNKW
Sbjct: 506 LVGNKW 511
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 2 NRAEMSSVELTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVAL 61
NR ++DV GGAT+FP + +V+P+KG+AVFW+N A+ DY H+ CPV +
Sbjct: 448 NRIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLV 507
Query: 62 GNKW 65
GNKW
Sbjct: 508 GNKW 511
>sp|Q5RAG8|P4HA1_PONAB Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2
SV=1
Length = 534
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 62 GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
GN+ L ++DV GGAT+FP + +V+P+KG+AVFWYN A+ DY H+ CPV
Sbjct: 447 GNRIATWLFY-MSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPV 505
Query: 122 ALGNKW 127
+GNKW
Sbjct: 506 LVGNKW 511
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 2 NRAEMSSVELTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVAL 61
NR ++DV GGAT+FP + +V+P+KG+AVFW+N A+ DY H+ CPV +
Sbjct: 448 NRIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLV 507
Query: 62 GNKW 65
GNKW
Sbjct: 508 GNKW 511
>sp|Q60715|P4HA1_MOUSE Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2
SV=2
Length = 534
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 62 GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
GN+ L ++DV GGAT+FP + +V+P+KG+AVFWYN A+ DY H+ CPV
Sbjct: 447 GNRIATWLFY-MSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPV 505
Query: 122 ALGNKW 127
+GNKW
Sbjct: 506 LVGNKW 511
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 2 NRAEMSSVELTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVAL 61
NR ++DV GGAT+FP + +V+P+KG+AVFW+N A+ DY H+ CPV +
Sbjct: 448 NRIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLV 507
Query: 62 GNKW 65
GNKW
Sbjct: 508 GNKW 511
>sp|P13674|P4HA1_HUMAN Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1
SV=2
Length = 534
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 62 GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
GN+ L ++DV GGAT+FP + +V+P+KG+AVFWYN A+ DY H+ CPV
Sbjct: 447 GNRIATWLFY-MSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPV 505
Query: 122 ALGNKW 127
+GNKW
Sbjct: 506 LVGNKW 511
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 2 NRAEMSSVELTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVAL 61
NR ++DV GGAT+FP + +V+P+KG+AVFW+N A+ DY H+ CPV +
Sbjct: 448 NRIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLV 507
Query: 62 GNKW 65
GNKW
Sbjct: 508 GNKW 511
>sp|O15460|P4HA2_HUMAN Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1
SV=1
Length = 535
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 69 LLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 127
L+ ++DVE GGAT+FP L ++P+KG+AVFWYN + DYR H+ CPV +G KW
Sbjct: 454 FLNYMSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKW 512
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 11 LTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKW 65
++DVE GGAT+FP L ++P+KG+AVFW+N + DY H+ CPV +G KW
Sbjct: 458 MSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKW 512
>sp|Q1RMU3|P4HA1_BOVIN Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1
SV=1
Length = 534
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 62 GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
GN+ L ++DV GGAT+FP + +V+P+KG+AVFWYN A+ DY H+ CPV
Sbjct: 447 GNRIATWLFY-MSDVLAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPV 505
Query: 122 ALGNKW 127
+GNKW
Sbjct: 506 LVGNKW 511
Score = 70.1 bits (170), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 2 NRAEMSSVELTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVAL 61
NR ++DV GGAT+FP + +V+P+KG+AVFW+N A+ DY H+ CPV +
Sbjct: 448 NRIATWLFYMSDVLAGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLV 507
Query: 62 GNKW 65
GNKW
Sbjct: 508 GNKW 511
>sp|Q60716|P4HA2_MOUSE Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2
SV=1
Length = 537
Score = 72.8 bits (177), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 69 LLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 127
L+ ++DVE GGAT+FP L ++P+KG+AVFWYN + DYR H+ CPV +G KW
Sbjct: 456 FLNYMSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKW 514
Score = 66.6 bits (161), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 11 LTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKW 65
++DVE GGAT+FP L ++P+KG+AVFW+N + DY H+ CPV +G KW
Sbjct: 460 MSDVEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKW 514
>sp|Q5ZLK5|P4HA2_CHICK Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2
SV=1
Length = 534
Score = 72.4 bits (176), Expect = 8e-13, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 62 GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
GN+ L + ++DVE GGAT+FP ++P+KG+AVFWYN + DYR H+ CPV
Sbjct: 447 GNRLATFL-NYMSDVEAGGATVFPDFGAAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPV 505
Query: 122 ALGNKW 127
+G KW
Sbjct: 506 LVGCKW 511
Score = 65.9 bits (159), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 11 LTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKW 65
++DVE GGAT+FP ++P+KG+AVFW+N + DY H+ CPV +G KW
Sbjct: 457 MSDVEAGGATVFPDFGAAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPVLVGCKW 511
>sp|P16924|P4HA1_CHICK Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1
SV=1
Length = 516
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 62 GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
GN+ L ++DV GGAT+FP + +V+P+KG+AVFWYN + DY H+ CPV
Sbjct: 429 GNRIATWLFY-MSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFPSGEGDYSTRHAACPV 487
Query: 122 ALGNKW 127
+GNKW
Sbjct: 488 LVGNKW 493
Score = 68.9 bits (167), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 2 NRAEMSSVELTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVAL 61
NR ++DV GGAT+FP + +V+P+KG+AVFW+N + DY H+ CPV +
Sbjct: 430 NRIATWLFYMSDVSAGGATVFPEVGASVWPKKGTAVFWYNLFPSGEGDYSTRHAACPVLV 489
Query: 62 GNKW 65
GNKW
Sbjct: 490 GNKW 493
>sp|Q20065|P4HA2_CAEEL Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans
GN=phy-2 PE=1 SV=1
Length = 539
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 62 GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
GN+ +L ++ E GGAT+F L VFP K A+FWYN + D R H+ CPV
Sbjct: 437 GNRIATVLFY-MSQPERGGATVFNHLGTAVFPSKNDALFWYNLRRDGEGDLRTRHAACPV 495
Query: 122 ALGNKW 127
LG KW
Sbjct: 496 LLGVKW 501
Score = 55.1 bits (131), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 33/64 (51%)
Query: 2 NRAEMSSVELTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVAL 61
NR ++ E GGAT+F L VFP K A+FW+N + D H+ CPV L
Sbjct: 438 NRIATVLFYMSQPERGGATVFNHLGTAVFPSKNDALFWYNLRRDGEGDLRTRHAACPVLL 497
Query: 62 GNKW 65
G KW
Sbjct: 498 GVKW 501
>sp|Q6W3E9|P4HA3_RAT Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus GN=P4ha3
PE=2 SV=1
Length = 544
Score = 55.5 bits (132), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 62 GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
GN+ L++ L+ VE GGAT F N +V K +A+FW+N H + D H+GCPV
Sbjct: 457 GNRAATLMIY-LSSVEAGGATAFIYGNFSVPVVKNAALFWWNLHRSGEGDDDTLHAGCPV 515
Query: 122 ALGNKW 127
+G+KW
Sbjct: 516 LVGDKW 521
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 2 NRAEMSSVELTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVAL 61
NRA + L+ VE GGAT F N +V K +A+FW N H + D H+GCPV +
Sbjct: 458 NRAATLMIYLSSVEAGGATAFIYGNFSVPVVKNAALFWWNLHRSGEGDDDTLHAGCPVLV 517
Query: 62 GNKW 65
G+KW
Sbjct: 518 GDKW 521
>sp|Q7Z4N8|P4HA3_HUMAN Prolyl 4-hydroxylase subunit alpha-3 OS=Homo sapiens GN=P4HA3 PE=1
SV=1
Length = 544
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 62 GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
GN+ ++ L+ VE GGAT F NL+V + +A+FW+N H + D H+GCPV
Sbjct: 457 GNRVATFMIY-LSSVEAGGATAFIYANLSVPVVRNAALFWWNLHRSGEGDSDTLHAGCPV 515
Query: 122 ALGNKW 127
+G+KW
Sbjct: 516 LVGDKW 521
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 2 NRAEMSSVELTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVAL 61
NR + L+ VE GGAT F NL+V + +A+FW N H + D H+GCPV +
Sbjct: 458 NRVATFMIYLSSVEAGGATAFIYANLSVPVVRNAALFWWNLHRSGEGDSDTLHAGCPVLV 517
Query: 62 GNKW 65
G+KW
Sbjct: 518 GDKW 521
>sp|Q6W3F0|P4HA3_MOUSE Prolyl 4-hydroxylase subunit alpha-3 OS=Mus musculus GN=P4ha3 PE=2
SV=1
Length = 542
Score = 53.9 bits (128), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 62 GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
GN+ ++ L+ VE GGAT F N +V K +A+FW+N H + D H+GCPV
Sbjct: 455 GNRVATFMIY-LSSVEAGGATAFIYGNFSVPVVKNAALFWWNLHRSGEGDGDTLHAGCPV 513
Query: 122 ALGNKW 127
+G+KW
Sbjct: 514 LVGDKW 519
Score = 53.1 bits (126), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 2 NRAEMSSVELTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVAL 61
NR + L+ VE GGAT F N +V K +A+FW N H + D H+GCPV +
Sbjct: 456 NRVATFMIYLSSVEAGGATAFIYGNFSVPVVKNAALFWWNLHRSGEGDGDTLHAGCPVLV 515
Query: 62 GNKW 65
G+KW
Sbjct: 516 GDKW 519
>sp|Q75UG4|P4HA3_BOVIN Prolyl 4-hydroxylase subunit alpha-3 OS=Bos taurus GN=P4HA3 PE=2
SV=1
Length = 544
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 62 GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
GN+ ++ L+ VE GGAT F N +V K +A+FW+N H + D H+ CPV
Sbjct: 457 GNRVATFMIY-LSSVEAGGATAFIYGNFSVPVVKNAALFWWNLHRSGEGDGDTLHAACPV 515
Query: 122 ALGNKW 127
+G+KW
Sbjct: 516 LVGDKW 521
Score = 50.4 bits (119), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 2 NRAEMSSVELTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVAL 61
NR + L+ VE GGAT F N +V K +A+FW N H + D H+ CPV +
Sbjct: 458 NRVATFMIYLSSVEAGGATAFIYGNFSVPVVKNAALFWWNLHRSGEGDGDTLHAACPVLV 517
Query: 62 GNKW 65
G+KW
Sbjct: 518 GDKW 521
>sp|Q10576|P4HA1_CAEEL Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans
GN=dpy-18 PE=1 SV=2
Length = 559
Score = 47.0 bits (110), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 62 GNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121
GN+ +L ++ GG T+F T+ P K A+FWYN + + H+ CPV
Sbjct: 440 GNRIATVLFY-MSQPSHGGGTVFTEAKSTILPTKNDALFWYNLYKQGDGNPDTRHAACPV 498
Query: 122 ALGNKW 127
+G KW
Sbjct: 499 LVGIKW 504
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 17 GGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKW 65
GG T+F T+ P K A+FW+N + + H+ CPV +G KW
Sbjct: 456 GGGTVFTEAKSTILPTKNDALFWYNLYKQGDGNPDTRHAACPVLVGIKW 504
>sp|Q8BG58|P4HTM_MOUSE Transmembrane prolyl 4-hydroxylase OS=Mus musculus GN=P4htm PE=2
SV=1
Length = 503
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 88 NLTVFPEKGSAVFWYN------AHANTLLDYRMYHSGCPVALGNKW 127
NL V P++G+AVFWYN + DY + H GC V G KW
Sbjct: 409 NLRVKPQQGTAVFWYNYLPDGQGWVGEVDDYSL-HGGCLVTRGTKW 453
Score = 38.1 bits (87), Expect = 0.018, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 26 NLTVFPEKGSAVFWHNAHANTL-----LDYWMYHSGCPVALGNKW 65
NL V P++G+AVFW+N + +D + H GC V G KW
Sbjct: 409 NLRVKPQQGTAVFWYNYLPDGQGWVGEVDDYSLHGGCLVTRGTKW 453
>sp|Q9NXG6|P4HTM_HUMAN Transmembrane prolyl 4-hydroxylase OS=Homo sapiens GN=P4HTM PE=1
SV=2
Length = 502
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 88 NLTVFPEKGSAVFWYN------AHANTLLDYRMYHSGCPVALGNKW 127
NL V P++G+AVFWYN + DY + H GC V G KW
Sbjct: 408 NLRVKPQQGTAVFWYNYLPDGQGWVGDVDDYSL-HGGCLVTRGTKW 452
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 26 NLTVFPEKGSAVFWHNAHANTL-----LDYWMYHSGCPVALGNKW 65
NL V P++G+AVFW+N + +D + H GC V G KW
Sbjct: 408 NLRVKPQQGTAVFWYNYLPDGQGWVGDVDDYSLHGGCLVTRGTKW 452
>sp|Q5UP57|P4H_MIMIV Putative prolyl 4-hydroxylase OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L593 PE=1 SV=1
Length = 242
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 17 GGATIFPSLNLTVFPEKGSA-VFWHNAHANTLLDYWMYHSGCPVALGNKW 65
G T FP+LN P+ G A VF+ A+ + + H+G PV G KW
Sbjct: 181 DGHTYFPNLNQKFKPKTGDALVFYPLANNSNKCHPYSLHAGMPVTSGEKW 230
Score = 32.7 bits (73), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 79 GGATIFPSLNLTVFPEKGSAVFWY--NAHANTLLDYRMYHSGCPVALGNKW 127
G T FP+LN P+ G A+ +Y ++N Y + H+G PV G KW
Sbjct: 181 DGHTYFPNLNQKFKPKTGDALVFYPLANNSNKCHPYSL-HAGMPVTSGEKW 230
>sp|Q3BNC0|ANMK_XANC5 Anhydro-N-acetylmuramic acid kinase OS=Xanthomonas campestris pv.
vesicatoria (strain 85-10) GN=anmK PE=3 SV=1
Length = 377
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 26 NLTVFPEKGSAVFWHNAHANTLLDYW-MYHSGCPVALGNKWGKLLLSGLTDVEL 78
NLT+ P G+ + + AN LLD W H G P + G SG D L
Sbjct: 183 NLTLIPRDGAVLGFDTGPANALLDSWCQRHHGTPF---DAEGAFAASGRVDAVL 233
>sp|Q5H5K4|ANMK_XANOR Anhydro-N-acetylmuramic acid kinase OS=Xanthomonas oryzae pv.
oryzae (strain KACC10331 / KXO85) GN=anmK PE=3 SV=1
Length = 377
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 26 NLTVFPEKGSAVFWHNAHANTLLDYW-MYHSGCPVALGNKWGKLLLSGLTD 75
NLT+ P G+ + + AN LLD W H G P + G SG D
Sbjct: 183 NLTLIPRDGAVLGFDTGPANALLDSWCQRHHGTPF---DAEGAFAASGRVD 230
>sp|Q2P894|ANMK_XANOM Anhydro-N-acetylmuramic acid kinase OS=Xanthomonas oryzae pv.
oryzae (strain MAFF 311018) GN=anmK PE=3 SV=1
Length = 377
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 26 NLTVFPEKGSAVFWHNAHANTLLDYW-MYHSGCPVALGNKWGKLLLSGLTD 75
NLT+ P G+ + + AN LLD W H G P + G SG D
Sbjct: 183 NLTLIPRDGAVLGFDTGPANALLDSWCQRHHGTPF---DAEGAFAASGRVD 230
>sp|Q8P473|ANMK_XANCP Anhydro-N-acetylmuramic acid kinase OS=Xanthomonas campestris pv.
campestris (strain ATCC 33913 / NCPPB 528 / LMG 568)
GN=anmK PE=3 SV=1
Length = 377
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 26 NLTVFPEKGSAVFWHNAHANTLLDYW-MYHSGCP 58
NLT+ P G+ + + AN LLD W H G P
Sbjct: 183 NLTLIPRDGAVLGFDTGPANALLDSWCQQHRGTP 216
>sp|Q4UPQ7|ANMK_XANC8 Anhydro-N-acetylmuramic acid kinase OS=Xanthomonas campestris pv.
campestris (strain 8004) GN=anmK PE=3 SV=1
Length = 377
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 26 NLTVFPEKGSAVFWHNAHANTLLDYW-MYHSGCP 58
NLT+ P G+ + + AN LLD W H G P
Sbjct: 183 NLTLIPRDGAVLGFDTGPANALLDSWCQQHRGTP 216
>sp|Q9LV33|BGL44_ARATH Beta-glucosidase 44 OS=Arabidopsis thaliana GN=BGLU44 PE=2 SV=1
Length = 512
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 11/52 (21%)
Query: 29 VFPEKGSAVFWHN-AHANTLLDYW----------MYHSGCPVALGNKWGKLL 69
+FPE V W A+ N L+DY +YH P+AL NK+ LL
Sbjct: 123 IFPEGSGKVNWKGVAYYNRLIDYMVQKGITPYANLYHYDLPLALENKYKGLL 174
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 11/52 (21%)
Query: 91 VFPEKGSAVFWYN-AHANTLLDY----------RMYHSGCPVALGNKWGKLL 131
+FPE V W A+ N L+DY +YH P+AL NK+ LL
Sbjct: 123 IFPEGSGKVNWKGVAYYNRLIDYMVQKGITPYANLYHYDLPLALENKYKGLL 174
>sp|Q6YFQ2|CX6B2_HUMAN Cytochrome c oxidase subunit 6B2 OS=Homo sapiens GN=COX6B2 PE=2
SV=1
Length = 88
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 9/25 (36%), Positives = 17/25 (68%)
Query: 112 YRMYHSGCPVALGNKWGKLLLSGVF 136
+R+YHS CP++ W + + +G+F
Sbjct: 60 FRVYHSLCPISWVESWNEQIKNGIF 84
>sp|O74405|SET11_SCHPO Ribosomal N-lysine methyltransferase set11 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=set11 PE=1 SV=1
Length = 381
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 1 MNRAEMSSVELTDVELGGATIFPSLNLTVFPEKGSAVFWHNA-HANTLL 48
M+ + E++ V+ GA + PSL +V P+ GS V +N + NT+L
Sbjct: 1 MSNKQNIESEVSWVKSKGAFVHPSLEFSVIPDAGSCVLANNDINENTVL 49
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,590,312
Number of Sequences: 539616
Number of extensions: 1945375
Number of successful extensions: 3083
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3031
Number of HSP's gapped (non-prelim): 52
length of query: 136
length of database: 191,569,459
effective HSP length: 101
effective length of query: 35
effective length of database: 137,068,243
effective search space: 4797388505
effective search space used: 4797388505
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)