Query psy6258
Match_columns 136
No_of_seqs 206 out of 1616
Neff 7.2
Searched_HMMs 29240
Date Fri Aug 16 21:45:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6258.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6258hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3itq_A Prolyl 4-hydroxylase, a 99.9 3.2E-28 1.1E-32 185.3 4.3 92 41-135 121-212 (216)
2 2jig_A Prolyl-4 hydroxylase; h 99.9 2.5E-27 8.4E-32 180.1 7.0 94 41-135 108-217 (224)
3 3itq_A Prolyl 4-hydroxylase, a 99.8 1.8E-20 6.3E-25 142.5 4.3 69 2-70 141-209 (216)
4 2jig_A Prolyl-4 hydroxylase; h 99.8 4.1E-20 1.4E-24 140.2 5.6 69 2-70 131-214 (224)
5 3dkq_A PKHD-type hydroxylase S 99.7 1.5E-17 5E-22 128.5 2.8 82 41-134 109-194 (243)
6 3dkq_A PKHD-type hydroxylase S 99.2 2.7E-12 9.2E-17 99.0 2.5 60 2-70 129-192 (243)
7 2hbt_A EGL nine homolog 1; pro 99.0 8.3E-10 2.8E-14 85.0 6.0 76 49-134 129-212 (247)
8 2hbt_A EGL nine homolog 1; pro 98.2 6.7E-07 2.3E-11 68.7 4.0 64 2-74 142-213 (247)
9 2rg4_A Uncharacterized protein 95.8 0.019 6.6E-07 42.7 6.0 73 38-127 105-199 (216)
10 3kt7_A PKHD-type hydroxylase T 94.4 0.062 2.1E-06 46.1 5.8 76 49-134 135-227 (633)
11 2rg4_A Uncharacterized protein 88.7 0.69 2.4E-05 34.2 5.1 55 2-65 123-199 (216)
12 2a1x_A Phytanoyl-COA dioxygena 85.3 1.8 6.2E-05 32.9 6.0 34 89-131 216-250 (308)
13 3kt7_A PKHD-type hydroxylase T 83.7 1.5 5.1E-05 37.7 5.1 69 2-76 146-231 (633)
14 2rdq_A 1-deoxypentalenic acid 66.0 4 0.00014 30.5 2.9 36 89-133 211-250 (288)
15 1nx8_A CARC, carbapenem syntha 65.9 7.2 0.00025 29.0 4.3 42 85-134 228-271 (273)
16 2a1x_A Phytanoyl-COA dioxygena 57.5 21 0.00073 26.7 5.7 62 3-74 158-254 (308)
17 2fct_A Syringomycin biosynthes 55.5 13 0.00046 27.9 4.2 25 89-122 220-244 (313)
18 2opw_A Phyhd1 protein; double- 55.0 7.9 0.00027 28.9 2.8 27 89-124 228-254 (291)
19 1otj_A Alpha-ketoglutarate-dep 51.5 14 0.00048 27.5 3.7 41 85-133 232-273 (283)
20 2q4a_A Clavaminate synthase-li 50.9 12 0.00042 28.6 3.4 36 88-132 293-329 (330)
21 2wbq_A L-arginine beta-hydroxy 49.5 16 0.00055 28.3 3.9 39 88-134 296-338 (358)
22 3nnf_A CURA; non-HAEM Fe(II)/a 48.0 13 0.00044 29.5 3.0 32 94-134 239-274 (344)
23 3o2g_A Gamma-butyrobetaine dio 47.4 20 0.00067 28.4 4.1 42 85-134 325-369 (388)
24 2og5_A Putative oxygenase; non 47.3 16 0.00056 28.4 3.6 39 88-134 291-333 (357)
25 1ds1_A Clavaminate synthase 1; 41.7 23 0.0008 27.0 3.6 39 88-134 259-301 (324)
26 2pp6_A Gifsy-2 prophage ATP-bi 40.4 16 0.00054 24.0 2.1 12 91-102 62-73 (102)
27 3gja_A CYTC3; halogenase, beta 35.1 18 0.00061 27.8 2.0 25 89-122 222-246 (319)
28 3eat_X Pyoverdine biosynthesis 33.2 27 0.00091 26.4 2.7 41 85-133 238-279 (293)
29 3emr_A ECTD; double stranded b 32.0 20 0.00069 27.4 1.9 25 91-124 232-256 (310)
30 1oih_A Putative alkylsulfatase 30.8 39 0.0013 25.4 3.3 41 85-133 241-282 (301)
31 3m05_A Uncharacterized protein 30.5 9.7 0.00033 25.5 -0.2 13 72-84 92-104 (114)
32 2dbn_A Hypothetical protein YB 29.4 18 0.00061 29.9 1.2 34 89-131 365-400 (461)
33 3pvj_A Alpha-ketoglutarate-dep 24.0 37 0.0013 25.4 2.0 28 87-122 232-259 (277)
34 3r1j_A Alpha-ketoglutarate-dep 21.5 44 0.0015 25.4 2.0 27 87-121 236-262 (301)
35 3dqy_A Toluene 1,2-dioxygenase 20.3 1.2E+02 0.0041 18.8 3.7 43 73-124 8-52 (106)
No 1
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=99.94 E-value=3.2e-28 Score=185.33 Aligned_cols=92 Identities=35% Similarity=0.539 Sum_probs=83.0
Q ss_pred ecccCccccccccCcCCccccCcccceeeeeccccccccCcccCCCCceEEecccCeEEEEEecCCCCCCCccceeccCc
Q psy6258 41 NAHANTLLDYWMYHSGCPVALGNKWGKLLLSGLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCP 120 (136)
Q Consensus 41 n~~~~~h~D~~s~H~~~pv~~G~R~aT~l~~yLnd~~~GG~t~Fp~~~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~p 120 (136)
+++|+.|.|++... .+...|+|.+|+++ ||||+++||+|+||+++++|+|++|+||+|+|++++|+.|.+++|++||
T Consensus 121 G~~y~~H~D~~~~~--~~~~~~~R~~T~l~-YLnd~~~GGeT~Fp~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~P 197 (216)
T 3itq_A 121 DQQYKAHYDYFAEH--SRSAANNRISTLVM-YLNDVEEGGETFFPKLNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAP 197 (216)
T ss_dssp TCCEEEECSSCCTT--SGGGGGCEEEEEEE-ECSCCSEECCEEETTTTEEECCCTTCEEEEECCCSSHHHHHTTCEEECC
T ss_pred CCccccccCCCcCC--CcccCCceEEEEEE-ecccCCcCceeEecCCCCEEecCCCeEEEEeccCCCCCCCCccccccce
Confidence 56778889986543 22346899999999 9999999999999999999999999999999999999999999999999
Q ss_pred cccCcEEEEEecccc
Q psy6258 121 VALGNKWGKLLLSGV 135 (136)
Q Consensus 121 v~~G~K~~~~~w~~~ 135 (136)
|.+|+||++|+|+..
T Consensus 198 V~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 198 VTKGEKWIATQWVRR 212 (216)
T ss_dssp EEESCEEEEEEEEES
T ss_pred eccccEEEEEeeEec
Confidence 999999999999863
No 2
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=99.94 E-value=2.5e-27 Score=180.12 Aligned_cols=94 Identities=30% Similarity=0.475 Sum_probs=82.1
Q ss_pred ecccCccccccccCcC-CccccCcccceeeeeccccccccCcccCCCC---------------ceEEecccCeEEEEEec
Q psy6258 41 NAHANTLLDYWMYHSG-CPVALGNKWGKLLLSGLTDVELGGATIFPSL---------------NLTVFPEKGSAVFWYNA 104 (136)
Q Consensus 41 n~~~~~h~D~~s~H~~-~pv~~G~R~aT~l~~yLnd~~~GG~t~Fp~~---------------~~~v~p~~G~al~~~~~ 104 (136)
+++|+.|.|++..... .+...++|.+|+++ ||||+++||||+||.+ +++|+|++|+||+|+|+
T Consensus 108 G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~-YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~V~P~~G~al~f~~~ 186 (224)
T 2jig_A 108 GQKYEPHYDYFHDPVNAGPEHGGQRVVTMLM-YLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLAVKPIKGDALMFYSL 186 (224)
T ss_dssp TCCEEEECCSSCCTTSSSCCCCSCEEEEEEE-ECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEEECCCTTCEEEEESB
T ss_pred CccccCcccCCCCccccccccCCCeEEEEEE-EecCCCCCCceeCCCcccccccccccccccCceEEecccCcEEEEEee
Confidence 5677888998653211 11245789999999 9999999999999997 69999999999999999
Q ss_pred CCCCCCCccceeccCccccCcEEEEEecccc
Q psy6258 105 HANTLLDYRMYHSGCPVALGNKWGKLLLSGV 135 (136)
Q Consensus 105 ~~~~~~d~~~~H~~~pv~~G~K~~~~~w~~~ 135 (136)
+++|+.|.+++|++|||.+|+||++++|+..
T Consensus 187 ~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 187 KPDGSNDPASLHGSCPTLKGDKWSATKWIHV 217 (224)
T ss_dssp CTTSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred CCCCCCCCCCcccCCccccceEEEEEEeEEc
Confidence 9999999999999999999999999999864
No 3
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=99.80 E-value=1.8e-20 Score=142.47 Aligned_cols=69 Identities=41% Similarity=0.635 Sum_probs=66.9
Q ss_pred ccceEEeeeecCCCCCCeeecCCCCceecccccceeEeeecccCccccccccCcCCccccCcccceeee
Q psy6258 2 NRAEMSSVELTDVELGGATIFPSLNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWGKLLL 70 (136)
Q Consensus 2 ~R~~T~~iyLnd~~~GG~T~Fp~l~l~v~p~kG~al~~~n~~~~~h~D~~s~H~~~pv~~G~R~aT~l~ 70 (136)
+|++|+++||||+++||+|.||.++++|+|++|+|++|+|.+.++..|..++|++|||..|.||+...|
T Consensus 141 ~R~~T~l~YLnd~~~GGeT~Fp~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W 209 (216)
T 3itq_A 141 NRISTLVMYLNDVEEGGETFFPKLNLSVHPRKGMAVYFEYFYQDQSLNELTLHGGAPVTKGEKWIATQW 209 (216)
T ss_dssp CEEEEEEEECSCCSEECCEEETTTTEEECCCTTCEEEEECCCSSHHHHHTTCEEECCEEESCEEEEEEE
T ss_pred ceEEEEEEecccCCcCceeEecCCCCEEecCCCeEEEEeccCCCCCCCCccccccceeccccEEEEEee
Confidence 799999999999999999999999999999999999999999999999999999999999999988877
No 4
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=99.80 E-value=4.1e-20 Score=140.19 Aligned_cols=69 Identities=32% Similarity=0.497 Sum_probs=66.1
Q ss_pred ccceEEeeeecCCCCCCeeecCCC---------------CceecccccceeEeeecccCccccccccCcCCccccCcccc
Q psy6258 2 NRAEMSSVELTDVELGGATIFPSL---------------NLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWG 66 (136)
Q Consensus 2 ~R~~T~~iyLnd~~~GG~T~Fp~l---------------~l~v~p~kG~al~~~n~~~~~h~D~~s~H~~~pv~~G~R~a 66 (136)
+|++|+++||||+++||+|.||.+ +++|+|++|+||+|+|.+.+++.|..++|++|||..|.||+
T Consensus 131 ~R~~T~l~YLnd~~~GGeT~Fp~~~~~~~~~~~~~c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~ 210 (224)
T 2jig_A 131 QRVVTMLMYLTTVEEGGETVLPNAEQKVTGDGWSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWS 210 (224)
T ss_dssp CEEEEEEEECSCCSEECCEEETTSSSCCCSTTSCTTGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEE
T ss_pred CeEEEEEEEecCCCCCCceeCCCcccccccccccccccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEE
Confidence 799999999999999999999998 58999999999999999999999999999999999999998
Q ss_pred eeee
Q psy6258 67 KLLL 70 (136)
Q Consensus 67 T~l~ 70 (136)
...|
T Consensus 211 ~~~W 214 (224)
T 2jig_A 211 ATKW 214 (224)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8877
No 5
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=99.67 E-value=1.5e-17 Score=128.47 Aligned_cols=82 Identities=15% Similarity=0.109 Sum_probs=65.0
Q ss_pred ecccCccccccccCcCCccccCcccceeeeecccc--ccccCcccCCCC--ceEEecccCeEEEEEecCCCCCCCcccee
Q psy6258 41 NAHANTLLDYWMYHSGCPVALGNKWGKLLLSGLTD--VELGGATIFPSL--NLTVFPEKGSAVFWYNAHANTLLDYRMYH 116 (136)
Q Consensus 41 n~~~~~h~D~~s~H~~~pv~~G~R~aT~l~~yLnd--~~~GG~t~Fp~~--~~~v~p~~G~al~~~~~~~~~~~d~~~~H 116 (136)
++++..|.|....... ....+|.+|+++ |||| +.+||||+||.. +.+|+|++|+||+|.+ .++|
T Consensus 109 G~~y~~H~D~~~~~~~--~~~~~r~~T~~l-YLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s---------~~lH 176 (243)
T 3dkq_A 109 GETFGYHIDNAIRSTP--DGMIRTDLSATL-FLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS---------SSLH 176 (243)
T ss_dssp TCEEEEECBCSEEEET--TEEEECCEEEEE-ECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET---------TSEE
T ss_pred CCeeccCCCCCCCCCC--CccccceEEEEE-EeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC---------CCeE
Confidence 3455666666433210 012356899999 9999 669999999986 6899999999999975 4899
Q ss_pred ccCccccCcEEEEEeccc
Q psy6258 117 SGCPVALGNKWGKLLLSG 134 (136)
Q Consensus 117 ~~~pv~~G~K~~~~~w~~ 134 (136)
++|||.+|+||+++.|+.
T Consensus 177 ~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 177 QVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp EECCEEEECEEEEEEEEE
T ss_pred cCccccccCEEEEEEehh
Confidence 999999999999999985
No 6
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=99.22 E-value=2.7e-12 Score=98.97 Aligned_cols=60 Identities=17% Similarity=0.246 Sum_probs=54.0
Q ss_pred ccceEEeeeecC--CCCCCeeecCCC--CceecccccceeEeeecccCccccccccCcCCccccCcccceeee
Q psy6258 2 NRAEMSSVELTD--VELGGATIFPSL--NLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWGKLLL 70 (136)
Q Consensus 2 ~R~~T~~iyLnd--~~~GG~T~Fp~l--~l~v~p~kG~al~~~n~~~~~h~D~~s~H~~~pv~~G~R~aT~l~ 70 (136)
+|.+|+++|||| +.+||+|+||.. +.+|+|++|++++|++ .++|++|||..|.||+.+.|
T Consensus 129 ~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s---------~~lH~v~pV~~G~R~~~~~W 192 (243)
T 3dkq_A 129 RTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS---------SSLHQVTPVLSGERTAAFMW 192 (243)
T ss_dssp ECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET---------TSEEEECCEEEECEEEEEEE
T ss_pred cceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC---------CCeEcCccccccCEEEEEEe
Confidence 589999999999 668999999987 5899999999999974 26999999999999988877
No 7
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=98.95 E-value=8.3e-10 Score=85.00 Aligned_cols=76 Identities=17% Similarity=0.207 Sum_probs=59.1
Q ss_pred cccccCcCCccccCcccceeeeecccc----ccccCccc-CCCC---ceEEecccCeEEEEEecCCCCCCCccceeccCc
Q psy6258 49 DYWMYHSGCPVALGNKWGKLLLSGLTD----VELGGATI-FPSL---NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCP 120 (136)
Q Consensus 49 D~~s~H~~~pv~~G~R~aT~l~~yLnd----~~~GG~t~-Fp~~---~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~p 120 (136)
+++..|.+.+ ...+|..|.++ |||+ .+.||+|. ||.. ..+|.|+.|++++|.+ +.++.|+.+|
T Consensus 129 ~~y~~H~D~~-~~~~R~~T~vl-YLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s-------~~~~~H~V~p 199 (247)
T 2hbt_A 129 TGYVRHVDNP-NGDGRCVTCIY-YLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWS-------DRRNPHEVQP 199 (247)
T ss_dssp CCEEEECSSC-SCCSEEEEEEE-ECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEEC-------STTCCEEECC
T ss_pred CcccccccCC-CCCCceEEEEE-EeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEec-------CCCceeeecc
Confidence 3444555553 23578899999 9999 36799986 6654 3799999999999986 3458999999
Q ss_pred cccCcEEEEEeccc
Q psy6258 121 VALGNKWGKLLLSG 134 (136)
Q Consensus 121 v~~G~K~~~~~w~~ 134 (136)
+ .|.+|.++.|+.
T Consensus 200 ~-~~~R~sit~W~~ 212 (247)
T 2hbt_A 200 A-YATRYAITVWYF 212 (247)
T ss_dssp B-SSCEEEEEEEEE
T ss_pred C-CCEEEEEEEEEc
Confidence 5 599999999985
No 8
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=98.24 E-value=6.7e-07 Score=68.68 Aligned_cols=64 Identities=17% Similarity=0.168 Sum_probs=49.9
Q ss_pred ccceEEeeeecCC----CCCCeee-cCCC---CceecccccceeEeeecccCccccccccCcCCccccCcccceeeeecc
Q psy6258 2 NRAEMSSVELTDV----ELGGATI-FPSL---NLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVALGNKWGKLLLSGL 73 (136)
Q Consensus 2 ~R~~T~~iyLnd~----~~GG~T~-Fp~l---~l~v~p~kG~al~~~n~~~~~h~D~~s~H~~~pv~~G~R~aT~l~~yL 73 (136)
+|..|+++|||+. +.||++. ||.. ..+|.|+.|.+++|.+. ..+.|..+| ..+.|++...| |-
T Consensus 142 ~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~-------~~~~H~V~p-~~~~R~sit~W-~~ 212 (247)
T 2hbt_A 142 GRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSD-------RRNPHEVQP-AYATRYAITVW-YF 212 (247)
T ss_dssp SEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECS-------TTCCEEECC-BSSCEEEEEEE-EE
T ss_pred CceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecC-------CCceeeecc-CCCEEEEEEEE-Ec
Confidence 6999999999993 5699985 6654 37899999999999753 236898888 46788877666 54
Q ss_pred c
Q psy6258 74 T 74 (136)
Q Consensus 74 n 74 (136)
.
T Consensus 213 ~ 213 (247)
T 2hbt_A 213 D 213 (247)
T ss_dssp E
T ss_pred C
Confidence 3
No 9
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=95.79 E-value=0.019 Score=42.73 Aligned_cols=73 Identities=16% Similarity=0.123 Sum_probs=52.8
Q ss_pred EeeecccCccccccccCcCCccccCcccceeeeeccccccccCcccC--CCC------------------c-eEEecccC
Q psy6258 38 FWHNAHANTLLDYWMYHSGCPVALGNKWGKLLLSGLTDVELGGATIF--PSL------------------N-LTVFPEKG 96 (136)
Q Consensus 38 ~~~n~~~~~h~D~~s~H~~~pv~~G~R~aT~l~~yLnd~~~GG~t~F--p~~------------------~-~~v~p~~G 96 (136)
.|.+....+ ++...|.. .+++.+..+ ||+..+.||+..| |+. . ..|+|+.|
T Consensus 105 ~W~~~~~~G--~~~~~H~H-----~~~~lSgV~-Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G 176 (216)
T 2rg4_A 105 IWINILPEG--GVHGSHIH-----PHSVISGTT-YVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVG 176 (216)
T ss_dssp EEEEEECTT--CCEEEECC-----TTCSEEEEE-EEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTT
T ss_pred EEEEEcCCC--CcccCccC-----CCCeEEEEE-EEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCC
Confidence 677665554 34445532 356777778 9999889999999 421 1 37999999
Q ss_pred eEEEEEecCCCCCCCccceeccCcccc-CcEE
Q psy6258 97 SAVFWYNAHANTLLDYRMYHSGCPVAL-GNKW 127 (136)
Q Consensus 97 ~al~~~~~~~~~~~d~~~~H~~~pv~~-G~K~ 127 (136)
+.++|.+ ...|+..|..+ ++.+
T Consensus 177 ~lvlFpS---------~l~H~V~p~~~~~~Ri 199 (216)
T 2rg4_A 177 DVLLWES---------WLRHEVPMNMAEEDRI 199 (216)
T ss_dssp EEEEEET---------TSCEEECCCCSSSCEE
T ss_pred eEEEECC---------CCEEeccCCCCCCCEE
Confidence 9999986 58999999876 3444
No 10
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=94.42 E-value=0.062 Score=46.09 Aligned_cols=76 Identities=14% Similarity=0.121 Sum_probs=54.7
Q ss_pred cccccCcCCccccCcccceeeeeccccc------cccCcccCCC----------CceEEecccCeEEEEEecCCCCCCCc
Q psy6258 49 DYWMYHSGCPVALGNKWGKLLLSGLTDV------ELGGATIFPS----------LNLTVFPEKGSAVFWYNAHANTLLDY 112 (136)
Q Consensus 49 D~~s~H~~~pv~~G~R~aT~l~~yLnd~------~~GG~t~Fp~----------~~~~v~p~~G~al~~~~~~~~~~~d~ 112 (136)
++...|.+. .+.|..++++ |||+. +-||+..+=. ...+|.|.-|+.++|..- ..
T Consensus 135 ~fL~~H~D~---~~~RrvS~VL-YLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~vs------p~ 204 (633)
T 3kt7_A 135 CHLLTHDDV---IGSRRISFIL-YLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFFKVL------PG 204 (633)
T ss_dssp CEEEEECCC---CTTEEEEEEE-ECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEEEEECC------TT
T ss_pred CeeeecCCC---CCCeEEEEEE-EcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEEEEEcC------CC
Confidence 344455543 2458888888 99984 3699986522 346799999998888752 02
Q ss_pred cceeccCccc-cCcEEEEEeccc
Q psy6258 113 RMYHSGCPVA-LGNKWGKLLLSG 134 (136)
Q Consensus 113 ~~~H~~~pv~-~G~K~~~~~w~~ 134 (136)
++.|+-.||. ....+..+-|+.
T Consensus 205 ~S~H~V~eV~~~~~RlSItGWF~ 227 (633)
T 3kt7_A 205 FSFHDXEEVKVDKHRLSIQGWYH 227 (633)
T ss_dssp TCCEEECCBCSSCCEEEEEEEEE
T ss_pred CCcCCCCccCCCCCEEEEEEEec
Confidence 7999999998 456889999975
No 11
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=88.67 E-value=0.69 Score=34.16 Aligned_cols=55 Identities=13% Similarity=0.114 Sum_probs=40.5
Q ss_pred ccceEEeeeecCCCCCCeeecCCC--------------------C-ceecccccceeEeeecccCccccccccCcCCccc
Q psy6258 2 NRAEMSSVELTDVELGGATIFPSL--------------------N-LTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVA 60 (136)
Q Consensus 2 ~R~~T~~iyLnd~~~GG~T~Fp~l--------------------~-l~v~p~kG~al~~~n~~~~~h~D~~s~H~~~pv~ 60 (136)
+|..+..+||+..+.||+..|-.- . ..++|+.|+.++|++. ..|.-.|..
T Consensus 123 ~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~G~lvlFpS~---------l~H~V~p~~ 193 (216)
T 2rg4_A 123 HSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKVGDVLLWESW---------LRHEVPMNM 193 (216)
T ss_dssp TCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCTTEEEEEETT---------SCEEECCCC
T ss_pred CCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCCCeEEEECCC---------CEEeccCCC
Confidence 467889999999888999998431 1 2689999999999863 366666644
Q ss_pred c-Cccc
Q psy6258 61 L-GNKW 65 (136)
Q Consensus 61 ~-G~R~ 65 (136)
. +.|+
T Consensus 194 ~~~~Ri 199 (216)
T 2rg4_A 194 AEEDRI 199 (216)
T ss_dssp SSSCEE
T ss_pred CCCCEE
Confidence 3 4564
No 12
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=85.31 E-value=1.8 Score=32.86 Aligned_cols=34 Identities=21% Similarity=0.220 Sum_probs=25.0
Q ss_pred eEEecccCeEEEEEecCCCCCCCccceeccCcccc-CcEEEEEe
Q psy6258 89 LTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVAL-GNKWGKLL 131 (136)
Q Consensus 89 ~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~-G~K~~~~~ 131 (136)
+.+.-++|++++|. .+++|++.|..+ ...++...
T Consensus 216 v~~~~~aGd~vlf~---------~~~~H~s~~N~s~~~R~~~~~ 250 (308)
T 2a1x_A 216 VHLVMEKGDTVFFH---------PLLIHGSGQNKTQGFRKAISC 250 (308)
T ss_dssp EEECBCTTCEEEEC---------TTCCEEECCBCSSSCEEEEEE
T ss_pred EEccCCCccEEEEC---------CCccccCCCCCCCCceEEEEE
Confidence 45666899999986 479999999876 34555443
No 13
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=83.73 E-value=1.5 Score=37.69 Aligned_cols=69 Identities=17% Similarity=0.189 Sum_probs=44.1
Q ss_pred ccceEEeeeecCC------CCCCeeec-CC---------CCceecccccceeEeeecccCccccccccCcCCccc-cCcc
Q psy6258 2 NRAEMSSVELTDV------ELGGATIF-PS---------LNLTVFPEKGSAVFWHNAHANTLLDYWMYHSGCPVA-LGNK 64 (136)
Q Consensus 2 ~R~~T~~iyLnd~------~~GG~T~F-p~---------l~l~v~p~kG~al~~~n~~~~~h~D~~s~H~~~pv~-~G~R 64 (136)
.|..|+++|||+. +.||+..+ +. ...+|.|.-|..++|.... -.+.|.-.+|. ...|
T Consensus 146 ~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~vsp------~~S~H~V~eV~~~~~R 219 (633)
T 3kt7_A 146 SRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHSDPSAKLVPQFNQIAFFKVLP------GFSFHDXEEVKVDKHR 219 (633)
T ss_dssp TEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECSSCSEEECCCTTEEEEEECCT------TTCCEEECCBCSSCCE
T ss_pred CeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCCCceEEEecCCCeEEEEEcCC------CCCcCCCCccCCCCCE
Confidence 4889999999984 35888843 32 3457999999988886531 13567666664 4456
Q ss_pred cceeeeeccccc
Q psy6258 65 WGKLLLSGLTDV 76 (136)
Q Consensus 65 ~aT~l~~yLnd~ 76 (136)
+...-|.+-+..
T Consensus 220 lSItGWF~~p~~ 231 (633)
T 3kt7_A 220 LSIQGWYHIPQV 231 (633)
T ss_dssp EEEEEEEECCCT
T ss_pred EEEEEEeccCCC
Confidence 544444144444
No 14
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=65.95 E-value=4 Score=30.46 Aligned_cols=36 Identities=17% Similarity=0.149 Sum_probs=27.2
Q ss_pred eEEecccCeEEEEEecCCCCCCCccceeccCccccCc----EEEEEecc
Q psy6258 89 LTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGN----KWGKLLLS 133 (136)
Q Consensus 89 ~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~G~----K~~~~~w~ 133 (136)
+.+.-++|++++|.. +++|++.|..+.. .|....|+
T Consensus 211 v~~~~~aGdv~lf~~---------~~~H~s~~N~s~~~R~~R~s~~~~~ 250 (288)
T 2rdq_A 211 LHSPMEPGDILLFHA---------HMCHKSIPNLSKDPRLMRMSMDTRV 250 (288)
T ss_dssp ECCCCCTTCEEEEET---------TCCEEEECCCCCTTCCCEEEEEEEE
T ss_pred eecccCCCCEEEEeC---------CceecCCCCCCCCccceEEEEEEEE
Confidence 345568999999974 7999999998763 56666654
No 15
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=65.87 E-value=7.2 Score=28.95 Aligned_cols=42 Identities=17% Similarity=0.018 Sum_probs=34.1
Q ss_pred CCCceEEecccCeEEEEEecCCCCCCCccceeccCcccc--CcEEEEEeccc
Q psy6258 85 PSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVAL--GNKWGKLLLSG 134 (136)
Q Consensus 85 p~~~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~--G~K~~~~~w~~ 134 (136)
|..-++++=++|+.++|.| .+++|+..+-.. +..+....|+.
T Consensus 228 ~~~~~~~~w~~GD~~i~DN--------~~vlH~R~~f~~~~~~R~l~R~~i~ 271 (273)
T 1nx8_A 228 PRYYYKHFWEDGDLLIMDN--------RRVIHEREEFNDDDIVRRLYRGQTA 271 (273)
T ss_dssp TTTEEEECCCTTCEEEEET--------TTEEEEECCCCCTTCEEEEEEEEEE
T ss_pred CceEEEeEecCCCEEEEEC--------CeeeeccccCCCCCCCeEEEEeecc
Confidence 4456888889999999998 589999999764 47888888764
No 16
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=57.46 E-value=21 Score=26.74 Aligned_cols=62 Identities=16% Similarity=0.215 Sum_probs=36.5
Q ss_pred cceEEeeeecCCCC-CCee-ecCCC--------------------------------CceecccccceeEeeecccCccc
Q psy6258 3 RAEMSSVELTDVEL-GGAT-IFPSL--------------------------------NLTVFPEKGSAVFWHNAHANTLL 48 (136)
Q Consensus 3 R~~T~~iyLnd~~~-GG~T-~Fp~l--------------------------------~l~v~p~kG~al~~~n~~~~~h~ 48 (136)
+..|+.++|.|+.. .|.+ ..|.. -+.+.-++|++++|.
T Consensus 158 ~~v~~wiaL~D~~~enG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~aGd~vlf~-------- 229 (308)
T 2a1x_A 158 LIVCAWTAMEHISRNNGCLVVLPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFH-------- 229 (308)
T ss_dssp GEEEEEEESSCBCTTBTCEEECTTGGGSCCCCCCC-----------CCCCC-CCCSCCEEECBCTTCEEEEC--------
T ss_pred CeEEEEEEeeccCCCCCcEEEEcCCCCCccccccccccccCccccccCCccccccCCeEEccCCCccEEEEC--------
Confidence 46799999999764 4444 33321 123444677777764
Q ss_pred cccccCcCCcccc-Ccccceeeeeccc
Q psy6258 49 DYWMYHSGCPVAL-GNKWGKLLLSGLT 74 (136)
Q Consensus 49 D~~s~H~~~pv~~-G~R~aT~l~~yLn 74 (136)
..+.|++.|..+ ..|.+..+- |..
T Consensus 230 -~~~~H~s~~N~s~~~R~~~~~~-y~~ 254 (308)
T 2a1x_A 230 -PLLIHGSGQNKTQGFRKAISCH-FAS 254 (308)
T ss_dssp -TTCCEEECCBCSSSCEEEEEEE-EEE
T ss_pred -CCccccCCCCCCCCceEEEEEE-EEC
Confidence 346787777544 446665555 544
No 17
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=55.49 E-value=13 Score=27.92 Aligned_cols=25 Identities=12% Similarity=0.436 Sum_probs=21.6
Q ss_pred eEEecccCeEEEEEecCCCCCCCccceeccCccc
Q psy6258 89 LTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVA 122 (136)
Q Consensus 89 ~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~ 122 (136)
+.+.-++|++++|.. +++|++.|..
T Consensus 220 v~~~~~aGd~v~f~~---------~l~H~s~~N~ 244 (313)
T 2fct_A 220 VPMQMKAGQFIIFWS---------TLMHASYPHS 244 (313)
T ss_dssp EEECBCTTEEEEEET---------TSEEEECCBC
T ss_pred eEeeeCCceEEEEeC---------CceeeCCCCC
Confidence 567789999999974 7999999998
No 18
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=55.01 E-value=7.9 Score=28.87 Aligned_cols=27 Identities=11% Similarity=0.101 Sum_probs=21.1
Q ss_pred eEEecccCeEEEEEecCCCCCCCccceeccCccccC
Q psy6258 89 LTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALG 124 (136)
Q Consensus 89 ~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~G 124 (136)
+.+.-++|++++|.. +++|++.|..+.
T Consensus 228 v~~~~~aGd~~~f~~---------~~~H~s~~N~s~ 254 (291)
T 2opw_A 228 VPTPVQRGALVLIHG---------EVVHKSKQNLSD 254 (291)
T ss_dssp EEECBCTTCEEEEET---------TCEEEECCBCSS
T ss_pred eecccCCCcEEEEcC---------CceecCCCCCCC
Confidence 446678999999974 789998888763
No 19
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=51.51 E-value=14 Score=27.51 Aligned_cols=41 Identities=12% Similarity=0.047 Sum_probs=31.9
Q ss_pred CCCceEEecccCeEEEEEecCCCCCCCccceeccCcccc-CcEEEEEecc
Q psy6258 85 PSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVAL-GNKWGKLLLS 133 (136)
Q Consensus 85 p~~~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~-G~K~~~~~w~ 133 (136)
|..-++++=++|+.++|.| .+++|+..+-.. +..+....|+
T Consensus 232 ~~~~~~~~w~~GDv~i~DN--------~~~lH~r~~f~~~~~R~l~R~~i 273 (283)
T 1otj_A 232 PEFQVRWRWQPNDIAIWDN--------RVTQHYANADYLPQRRIMHRATI 273 (283)
T ss_dssp GGGEEEECCCTTCEEEEET--------TSEEEEECCCCTTSCEEEEEEEE
T ss_pred CCcEEEeeEcCCCEEEEEC--------cceeecccCCCCCCceEEEEEEE
Confidence 3345777788999999999 589999998753 5677777765
No 20
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=50.86 E-value=12 Score=28.55 Aligned_cols=36 Identities=19% Similarity=0.158 Sum_probs=27.0
Q ss_pred ceEEecccCeEEEEEecCCCCCCCccceeccCccccCc-EEEEEec
Q psy6258 88 NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGN-KWGKLLL 132 (136)
Q Consensus 88 ~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~G~-K~~~~~w 132 (136)
-++++=++|+.++|.| .+++|+..|- .|. ++...+|
T Consensus 293 ~~~~~w~~GDv~i~DN--------~~~lH~R~~f-~g~rR~l~r~~ 329 (330)
T 2q4a_A 293 CVAVPWQRGDVLLIDN--------WAVLHSRRPF-DPPRRVLASLC 329 (330)
T ss_dssp CBCCCCCTTCEEEEET--------TTEEEEECCE-ESCCEEEEEEB
T ss_pred EeecCCCCCCEEEEec--------ccccccCCCC-CCCceEEEeec
Confidence 4667778999999999 5899999995 564 4444444
No 21
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=49.50 E-value=16 Score=28.32 Aligned_cols=39 Identities=21% Similarity=0.291 Sum_probs=31.4
Q ss_pred ceEEecccCeEEEEEecCCCCCCCccceeccCccc---cC-cEEEEEeccc
Q psy6258 88 NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVA---LG-NKWGKLLLSG 134 (136)
Q Consensus 88 ~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~---~G-~K~~~~~w~~ 134 (136)
.++++=++|+.++|.| .+++|+..+-. .| ..|....|+.
T Consensus 296 ~~~~~w~pGDv~i~DN--------r~vlH~R~~f~~~~~~~~R~L~R~~i~ 338 (358)
T 2wbq_A 296 LYELVLDQGDVAFIDN--------RRAVHGRRAFQPRYDGRDRWLKRINIT 338 (358)
T ss_dssp CEEEECCTTCEEEEET--------TTEEEEECCCCCCCSSCCCEEEEEEEE
T ss_pred ceEEeecCCCEEEEeC--------cccccCCCCCCCCCCCCCceEEEEEEe
Confidence 5788889999999998 58999988865 24 6888877763
No 22
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=48.00 E-value=13 Score=29.47 Aligned_cols=32 Identities=22% Similarity=0.294 Sum_probs=24.0
Q ss_pred ccCeEEEEEecCCCCCCCccceeccCccccCc----EEEEEeccc
Q psy6258 94 EKGSAVFWYNAHANTLLDYRMYHSGCPVALGN----KWGKLLLSG 134 (136)
Q Consensus 94 ~~G~al~~~~~~~~~~~d~~~~H~~~pv~~G~----K~~~~~w~~ 134 (136)
+.|+|++|. .+++|++.|+..+. .-....|++
T Consensus 239 epGDav~F~---------~~tlHga~plgn~~~~rRRAfS~RfvG 274 (344)
T 3nnf_A 239 NLGDAFFFN---------KYVLHQSVPLKPGLHKLRRAFVIRLVD 274 (344)
T ss_dssp CTTCEEEEE---------TTCEEEECCBCTTSCSCEEEEEEEEEE
T ss_pred CCCcEEEEe---------cceeecCCCCCCCCccceeEEEEEEec
Confidence 789999996 58999999888742 245666654
No 23
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=47.35 E-value=20 Score=28.43 Aligned_cols=42 Identities=12% Similarity=0.141 Sum_probs=33.1
Q ss_pred CCCceEEecccCeEEEEEecCCCCCCCccceeccCcccc--C-cEEEEEeccc
Q psy6258 85 PSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVAL--G-NKWGKLLLSG 134 (136)
Q Consensus 85 p~~~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~--G-~K~~~~~w~~ 134 (136)
|...++++=++|+.++|.| .+++|+..+-.. | ..|....|+.
T Consensus 325 p~~~~~~~~~pGd~vi~DN--------r~~lH~R~~f~~~~~~~R~L~r~yi~ 369 (388)
T 3o2g_A 325 KESKFTFKMNPGDVITFDN--------WRLLHGRRSYEAGTEISRHLEGAYAD 369 (388)
T ss_dssp TTTCEEECCCTTCEEEEET--------TTEEEEECCCCCCSSCSCEEEEEEEC
T ss_pred hhhEEEEEcCCCcEEEEeC--------cEEeeCCCCcCCCCCCCEEEEEEEEc
Confidence 3446888889999999998 589999987764 4 6788777763
No 24
>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A*
Probab=47.34 E-value=16 Score=28.39 Aligned_cols=39 Identities=13% Similarity=0.034 Sum_probs=31.6
Q ss_pred ceEEecccCeEEEEEecCCCCCCCccceeccCcccc----CcEEEEEeccc
Q psy6258 88 NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVAL----GNKWGKLLLSG 134 (136)
Q Consensus 88 ~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~----G~K~~~~~w~~ 134 (136)
.++++=++|+.++|.| .+++|+..+... +..|....|+.
T Consensus 291 ~~~~~w~pGDivi~DN--------~~vlH~R~~f~d~~~~~~R~L~R~~i~ 333 (357)
T 2og5_A 291 AVTHRLLPGELAIVDN--------RVTVHGRTEFTPRYDGTDRWLQRTFVL 333 (357)
T ss_dssp CEEECCCTTCEEEEET--------TTEEEEECCCCCCCSSCSCEEEEEEEE
T ss_pred eEEEeeCCCCEEEEeC--------CccccCCCCCCCCCCCCCcEEEEEEEc
Confidence 4788889999999998 589999988752 46888887763
No 25
>1ds1_A Clavaminate synthase 1; oxygenase, trifunctional enzyme, oxidoreductase,lyase; HET: AKG; 1.08A {Streptomyces clavuligerus} SCOP: b.82.2.2 PDB: 1drt_A* 1ds0_A 1dry_A* 1gvg_A*
Probab=41.66 E-value=23 Score=26.96 Aligned_cols=39 Identities=23% Similarity=0.451 Sum_probs=31.2
Q ss_pred ceEEecccCeEEEEEecCCCCCCCccceeccCcccc---C-cEEEEEeccc
Q psy6258 88 NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVAL---G-NKWGKLLLSG 134 (136)
Q Consensus 88 ~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~---G-~K~~~~~w~~ 134 (136)
.++++=++|+.++|.| .+++|+..+... | ..|....|+.
T Consensus 259 ~~~~~w~~GDv~i~DN--------~~~lH~R~~f~~~~~~~~R~L~R~~v~ 301 (324)
T 1ds1_A 259 TEAVYLEPGDLLIVDN--------FRTTHARTPFSPRWDGKDRWLHRVYIR 301 (324)
T ss_dssp CEEECCCTTCEEEEET--------TTEEEEECCCCCCCSSCCCEEEEEEEE
T ss_pred cEEEeeCCCCEEEEeC--------CceeecCCccCCCCCCCCcEEEEEEEe
Confidence 5788889999999998 589999888753 2 6787777763
No 26
>2pp6_A Gifsy-2 prophage ATP-binding sugar transporter-LI protein; beta barrel, 4 helix bundle, structural genomics, PSI-2; 2.70A {Salmonella typhimurium LT2} SCOP: b.106.1.2
Probab=40.43 E-value=16 Score=24.02 Aligned_cols=12 Identities=33% Similarity=0.628 Sum_probs=10.6
Q ss_pred EecccCeEEEEE
Q psy6258 91 VFPEKGSAVFWY 102 (136)
Q Consensus 91 v~p~~G~al~~~ 102 (136)
.+|++|+.++|.
T Consensus 62 YrP~r~D~Vv~~ 73 (102)
T 2pp6_A 62 VIPRRGDRVVLR 73 (102)
T ss_dssp CCCCTTCEEEET
T ss_pred cccCCCCEEEEc
Confidence 799999999984
No 27
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=35.05 E-value=18 Score=27.80 Aligned_cols=25 Identities=20% Similarity=0.454 Sum_probs=20.4
Q ss_pred eEEecccCeEEEEEecCCCCCCCccceeccCccc
Q psy6258 89 LTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVA 122 (136)
Q Consensus 89 ~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~ 122 (136)
+.+.-++|++++|.. +++|++.|..
T Consensus 222 v~~~~~aGd~v~f~~---------~~~H~s~~N~ 246 (319)
T 3gja_A 222 YPMVLKPGEAVIFWS---------NTMHASLPHT 246 (319)
T ss_dssp CBCCBCTTEEEEEET---------TSCEEECCCC
T ss_pred eEeeECCCeEEEEcC---------CccccCCCCC
Confidence 345567899999975 8999999998
No 28
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=33.24 E-value=27 Score=26.44 Aligned_cols=41 Identities=12% Similarity=0.003 Sum_probs=29.2
Q ss_pred CCCceEEecccCeEEEEEecCCCCCCCccceeccCccccC-cEEEEEecc
Q psy6258 85 PSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALG-NKWGKLLLS 133 (136)
Q Consensus 85 p~~~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~G-~K~~~~~w~ 133 (136)
|+.-++.+=++|+.++|.| .+++|+..+-..+ ..+.-..|+
T Consensus 238 p~~~~~~~w~~GDlviwDN--------r~vlH~r~~~~~~~~R~l~R~~i 279 (293)
T 3eat_X 238 PQAHYAHRWRSDDLVIADN--------LTLLHGREAFAHRAPRHLRRVHI 279 (293)
T ss_dssp TTTEEEECCCTTCEEEEET--------TTEEEEECCBSSCCCEEEEEEEE
T ss_pred cccEEEEEcCCCCEEEEeC--------CceEEcccCCCCCCceEEEEEEE
Confidence 4446788888999999998 5899988875433 355544443
No 29
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=31.99 E-value=20 Score=27.39 Aligned_cols=25 Identities=12% Similarity=0.111 Sum_probs=20.0
Q ss_pred EecccCeEEEEEecCCCCCCCccceeccCccccC
Q psy6258 91 VFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALG 124 (136)
Q Consensus 91 v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~G 124 (136)
+.-++|++++|.. +++|++.|..+.
T Consensus 232 ~~~~aGdvl~f~~---------~~~H~s~~N~S~ 256 (310)
T 3emr_A 232 PTGKAGSVTLFES---------NTMHGSTSNITP 256 (310)
T ss_dssp CCBSTTCEEEEET---------TCCEEECCCCSS
T ss_pred eeeCCceEEEEeC---------CceecCCCCCCC
Confidence 4457999999974 799999988764
No 30
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=30.84 E-value=39 Score=25.36 Aligned_cols=41 Identities=12% Similarity=-0.020 Sum_probs=28.8
Q ss_pred CCCceEEecccCeEEEEEecCCCCCCCccceeccCcccc-CcEEEEEecc
Q psy6258 85 PSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVAL-GNKWGKLLLS 133 (136)
Q Consensus 85 p~~~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~-G~K~~~~~w~ 133 (136)
|..-++++=++|+.++|.| .+++|+..+-.. +..+.-..|+
T Consensus 241 ~~~~~~~~w~~GDvvi~DN--------r~~lH~r~~f~~~~~R~l~R~~i 282 (301)
T 1oih_A 241 LENTVRWRWEAGDVAIWDN--------RATQHYAVDDYGTQPRIVRRVTL 282 (301)
T ss_dssp GGGEEEECCCTTCEEEEET--------TSEEEEECCCCTTSCCEEEEEEE
T ss_pred ccceEEEEEcCCCEEEEEc--------cceeecccCCCCCCceEEEEEEE
Confidence 4456778888999999999 478888877653 2455544443
No 31
>3m05_A Uncharacterized protein PEPE_1480; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics; 3.15A {Pediococcus pentosaceus}
Probab=30.49 E-value=9.7 Score=25.46 Aligned_cols=13 Identities=38% Similarity=0.608 Sum_probs=11.0
Q ss_pred ccccccccCcccC
Q psy6258 72 GLTDVELGGATIF 84 (136)
Q Consensus 72 yLnd~~~GG~t~F 84 (136)
|.-+++.||+|+|
T Consensus 92 ~pvev~vGGAtvF 104 (114)
T 3m05_A 92 YPIKVQVGGATVL 104 (114)
T ss_dssp CCEEEEECCEEEE
T ss_pred cceEEEEcceEEE
Confidence 5568889999999
No 32
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=29.45 E-value=18 Score=29.93 Aligned_cols=34 Identities=38% Similarity=0.799 Sum_probs=25.2
Q ss_pred eEEec--ccCeEEEEEecCCCCCCCccceeccCccccCcEEEEEe
Q psy6258 89 LTVFP--EKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWGKLL 131 (136)
Q Consensus 89 ~~v~p--~~G~al~~~~~~~~~~~d~~~~H~~~pv~~G~K~~~~~ 131 (136)
+...| +.||.|+|.. ++.|+..|+..|.++-..+
T Consensus 365 mv~iP~vePGD~V~WH~---------D~iH~V~~~h~g~~~s~V~ 400 (461)
T 2dbn_A 365 LTSIPKLEAGDSVWWHC---------DVIHSVAPVENQQGWGNVM 400 (461)
T ss_dssp CEECCCBCTTCEEEEET---------TCCEEECCBSSCCSCCCEE
T ss_pred eeeCCCCCCCCEEEEcC---------CCccccccCCCCCcceeEE
Confidence 33444 7899999975 7899999998887664443
No 33
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=24.03 E-value=37 Score=25.41 Aligned_cols=28 Identities=14% Similarity=0.153 Sum_probs=22.1
Q ss_pred CceEEecccCeEEEEEecCCCCCCCccceeccCccc
Q psy6258 87 LNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVA 122 (136)
Q Consensus 87 ~~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~ 122 (136)
.-++.+=++|+.++|.| .+++|.+.+-.
T Consensus 232 ~~~r~~W~~GDlviwDN--------r~~lH~a~~d~ 259 (277)
T 3pvj_A 232 FSIRWRWQENDVAFWDN--------RVTQHFAVDDY 259 (277)
T ss_dssp GEEEECCCTTCEEEEET--------TSEEEEECCCC
T ss_pred cEEEEeeCCCCEEEEeC--------CceeeeccCCC
Confidence 35777778999999999 47888887644
No 34
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=21.55 E-value=44 Score=25.45 Aligned_cols=27 Identities=15% Similarity=0.115 Sum_probs=20.4
Q ss_pred CceEEecccCeEEEEEecCCCCCCCccceeccCcc
Q psy6258 87 LNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPV 121 (136)
Q Consensus 87 ~~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv 121 (136)
.-++.+=++|+.++|.| .+++|.+.+-
T Consensus 236 ~~~r~~W~~GDlviwDN--------r~~lH~a~~d 262 (301)
T 3r1j_A 236 NTVRWSWAPGDVAMWDN--------RATQHRAIDD 262 (301)
T ss_dssp GEEEECCCTTCEEEEET--------TSEEEEECCC
T ss_pred eEEEeeeCCCCEEEEEc--------CceeecccCC
Confidence 35777778999999998 4677776543
No 35
>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B*
Probab=20.34 E-value=1.2e+02 Score=18.76 Aligned_cols=43 Identities=14% Similarity=0.106 Sum_probs=24.2
Q ss_pred cccccccCcccCCCC--ceEEecccCeEEEEEecCCCCCCCccceeccCccccC
Q psy6258 73 LTDVELGGATIFPSL--NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALG 124 (136)
Q Consensus 73 Lnd~~~GG~t~Fp~~--~~~v~p~~G~al~~~~~~~~~~~d~~~~H~~~pv~~G 124 (136)
+.|+.+|+...|.-. .+.|.-..|....|.| .=.|.+||+..|
T Consensus 8 ~~~l~~g~~~~~~~~g~~i~v~r~~g~~~A~~~---------~CpH~g~~L~~g 52 (106)
T 3dqy_A 8 QGDLPPGEMQRYEGGPEPVMVCNVDGEFFAVQD---------TCTHGDWALSDG 52 (106)
T ss_dssp GGGSCTTCEEEECCSSSCEEEEEETTEEEEEES---------BCSSSSCBGGGS
T ss_pred HHHCCCCCEEEEEECCEEEEEEEECCEEEEEeC---------cCCCCCCCCcCc
Confidence 456666655544321 2334335565555555 566888888765
Done!