BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6259
(227 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5RAG8|P4HA1_PONAB Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2
SV=1
Length = 534
Score = 147 bits (371), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 129/230 (56%), Gaps = 19/230 (8%)
Query: 3 YPLACQGN-LSVPEDIKSNLKCFYESYN-NTFLKIGPLKVEELYLDPRVVKIHDAIYDSE 60
Y + C+G + + + L C Y N N + P K E+ + PR+++ HD I D+E
Sbjct: 289 YEMLCRGEGIKMTPRRQKKLFCRYHDGNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAE 348
Query: 61 INRIIELSKGKVERGKVVN--YGDTIYVDTRLSKVYFLYPEIFGDHPFLYKIQTRIQDMT 118
I + +L+K ++ R + N GD V R+SK +L ++P + +I RIQD+T
Sbjct: 349 IEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGY---ENPVVSRINMRIQDLT 405
Query: 119 NLVIGREERYKGPLQINNYGLGGHYDLHCDATPRDEGLW--------RLASFMFYLTDVE 170
L + E LQ+ NYG+GG Y+ H D +DE R+A+++FY++DV
Sbjct: 406 GLDVSTAEE----LQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVS 461
Query: 171 LGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 220
GGAT+FP + +V+P+KG+AVFWYN A+ DY H+ CPV +GNKW
Sbjct: 462 AGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKW 511
>sp|P13674|P4HA1_HUMAN Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1
SV=2
Length = 534
Score = 147 bits (371), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 129/230 (56%), Gaps = 19/230 (8%)
Query: 3 YPLACQGN-LSVPEDIKSNLKCFYESYN-NTFLKIGPLKVEELYLDPRVVKIHDAIYDSE 60
Y + C+G + + + L C Y N N + P K E+ + PR+++ HD I D+E
Sbjct: 289 YEMLCRGEGIKMTPRRQKKLFCRYHDGNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAE 348
Query: 61 INRIIELSKGKVERGKVVN--YGDTIYVDTRLSKVYFLYPEIFGDHPFLYKIQTRIQDMT 118
I + +L+K ++ R + N GD V R+SK +L ++P + +I RIQD+T
Sbjct: 349 IEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGY---ENPVVSRINMRIQDLT 405
Query: 119 NLVIGREERYKGPLQINNYGLGGHYDLHCDATPRDEGLW--------RLASFMFYLTDVE 170
L + E LQ+ NYG+GG Y+ H D +DE R+A+++FY++DV
Sbjct: 406 GLDVSTAEE----LQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVS 461
Query: 171 LGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 220
GGAT+FP + +V+P+KG+AVFWYN A+ DY H+ CPV +GNKW
Sbjct: 462 AGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKW 511
>sp|Q1RMU3|P4HA1_BOVIN Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1
SV=1
Length = 534
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 129/230 (56%), Gaps = 19/230 (8%)
Query: 3 YPLACQGN-LSVPEDIKSNLKCFYESYN-NTFLKIGPLKVEELYLDPRVVKIHDAIYDSE 60
Y + C+G + + + L C Y N N + P K E+ + PR+++ HD I D+E
Sbjct: 289 YEMLCRGEGIKMTPRRQKKLFCRYHDGNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAE 348
Query: 61 INRIIELSKGKVERGKVVN--YGDTIYVDTRLSKVYFLYPEIFGDHPFLYKIQTRIQDMT 118
I + +L+K ++ R + N GD V R+SK +L ++P + +I RIQD+T
Sbjct: 349 IEVVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGY---ENPVVSRINMRIQDLT 405
Query: 119 NLVIGREERYKGPLQINNYGLGGHYDLHCDATPRDEGLW--------RLASFMFYLTDVE 170
L + E LQ+ NYG+GG Y+ H D +DE R+A+++FY++DV
Sbjct: 406 GLDVSTAEE----LQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVL 461
Query: 171 LGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 220
GGAT+FP + +V+P+KG+AVFWYN A+ DY H+ CPV +GNKW
Sbjct: 462 AGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKW 511
>sp|Q60715|P4HA1_MOUSE Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2
SV=2
Length = 534
Score = 144 bits (362), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 127/230 (55%), Gaps = 19/230 (8%)
Query: 3 YPLACQGN-LSVPEDIKSNLKCFYESYN-NTFLKIGPLKVEELYLDPRVVKIHDAIYDSE 60
Y + C+G + + + L C Y N N + P K E+ + PR+++ HD I D+E
Sbjct: 289 YEMLCRGEGIKMTPRRQKRLFCRYHDGNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAE 348
Query: 61 INRIIELSKGKVERGKVVN--YGDTIYVDTRLSKVYFLYPEIFGDHPFLYKIQTRIQDMT 118
I + +L+K ++ R + N G V R+SK +L + P + +I RIQD+T
Sbjct: 349 IEIVKDLAKPRLRRATISNPVTGALETVHYRISKSAWLSGY---EDPVVSRINMRIQDLT 405
Query: 119 NLVIGREERYKGPLQINNYGLGGHYDLHCDATPRDEGLW--------RLASFMFYLTDVE 170
L + E LQ+ NYG+GG Y+ H D +DE R+A+++FY++DV
Sbjct: 406 GLDVSTAEE----LQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVS 461
Query: 171 LGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 220
GGAT+FP + +V+P+KG+AVFWYN A+ DY H+ CPV +GNKW
Sbjct: 462 AGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKW 511
>sp|Q20065|P4HA2_CAEEL Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans
GN=phy-2 PE=1 SV=1
Length = 539
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 124/231 (53%), Gaps = 19/231 (8%)
Query: 1 EIYPLACQGNLS-VPEDIKSNLKCFYESYNNTFLKIGPLKVEELYLDPRVVKIHDAIYDS 59
+ Y C+G + V K+ L+C+ + + FLK+ P+KVE L DP V + I+DS
Sbjct: 279 DAYEALCRGEIPPVEPKWKNKLRCYLKR-DKPFLKLAPIKVEILRFDPLAVLFKNVIHDS 337
Query: 60 EINRIIELSKGKVERGKVVN--YGDTIYVDTRLSKVYFLYPEIFGDHPFLYKIQTRIQDM 117
EI I EL+ K++R V N G+ + R+SK +L ++ P + ++ RI+D
Sbjct: 338 EIEVIKELASPKLKRATVQNSKTGELEHATYRISKSAWLKGDL---DPVIDRVNRRIEDF 394
Query: 118 TNLVIGREERYKGPLQINNYGLGGHYDLHCDATPRDEGLW--------RLASFMFYLTDV 169
TNL E LQ+ NYGLGGHYD H D ++E R+A+ +FY++
Sbjct: 395 TNLNQATSEE----LQVANYGLGGHYDPHFDFARKEEKNAFKTLNTGNRIATVLFYMSQP 450
Query: 170 ELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 220
E GGAT+F L VFP K A+FWYN + D R H+ CPV LG KW
Sbjct: 451 ERGGATVFNHLGTAVFPSKNDALFWYNLRRDGEGDLRTRHAACPVLLGVKW 501
>sp|P16924|P4HA1_CHICK Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1
SV=1
Length = 516
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 127/230 (55%), Gaps = 19/230 (8%)
Query: 3 YPLACQGN-LSVPEDIKSNLKC-FYESYNNTFLKIGPLKVEELYLDPRVVKIHDAIYDSE 60
Y + C+G L + + L C +Y+ N +GP+K E+ + PR+V+ D I D E
Sbjct: 271 YEMLCRGEGLKMTPRRQKRLFCRYYDGNRNPRYILGPVKQEDEWDKPRIVRFLDIISDEE 330
Query: 61 INRIIELSKGKVERGKVVN--YGDTIYVDTRLSKVYFLYPEIFGDHPFLYKIQTRIQDMT 118
I + EL+K ++ R V + G R+SK +L + P + +I TRIQD+T
Sbjct: 331 IETVKELAKPRLSRATVHDPETGKLTTAHYRVSKSAWLSGY---ESPVVSRINTRIQDLT 387
Query: 119 NLVIGREERYKGPLQINNYGLGGHYDLHCDATPRDEGLW--------RLASFMFYLTDVE 170
L + E LQ+ NYG+GG Y+ H D +DE R+A+++FY++DV
Sbjct: 388 GLDVSTAEE----LQVANYGVGGQYEPHFDFGRKDEPDAFKELGTGNRIATWLFYMSDVS 443
Query: 171 LGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 220
GGAT+FP + +V+P+KG+AVFWYN + DY H+ CPV +GNKW
Sbjct: 444 AGGATVFPEVGASVWPKKGTAVFWYNLFPSGEGDYSTRHAACPVLVGNKW 493
>sp|P54001|P4HA1_RAT Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1
PE=2 SV=2
Length = 534
Score = 142 bits (358), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 126/230 (54%), Gaps = 19/230 (8%)
Query: 3 YPLACQGN-LSVPEDIKSNLKCFYESYN-NTFLKIGPLKVEELYLDPRVVKIHDAIYDSE 60
Y + C+G + + + L C Y N N + P K E+ + PR+++ HD I D+E
Sbjct: 289 YEMLCRGEGIKMTPRRQKRLFCRYHDGNRNPKFILAPAKQEDEWDKPRIIRFHDIISDAE 348
Query: 61 INRIIELSKGKVERGKVVN--YGDTIYVDTRLSKVYFLYPEIFGDHPFLYKIQTRIQDMT 118
I + +L+K ++ R V + G R+SK +L + P + +I RIQD+T
Sbjct: 349 IEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGY---EDPVVSRINMRIQDLT 405
Query: 119 NLVIGREERYKGPLQINNYGLGGHYDLHCDATPRDEGLW--------RLASFMFYLTDVE 170
L + E LQ+ NYG+GG Y+ H D +DE R+A+++FY++DV
Sbjct: 406 GLDVSTAEE----LQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVS 461
Query: 171 LGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 220
GGAT+FP + +V+P+KG+AVFWYN A+ DY H+ CPV +GNKW
Sbjct: 462 AGGATVFPEVGASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKW 511
>sp|Q5ZLK5|P4HA2_CHICK Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2
SV=1
Length = 534
Score = 141 bits (355), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 126/231 (54%), Gaps = 19/231 (8%)
Query: 1 EIYPLACQGN-LSVPEDIKSNLKCFYESYN-NTFLKIGPLKVEELYLDPRVVKIHDAIYD 58
+IY C+G + + + L C Y N N L I P K E+ + P +V+ +D + D
Sbjct: 289 DIYEALCRGEGVKMTPRRQKRLFCRYHDGNRNPHLLIAPFKEEDEWDSPHIVRYYDVMSD 348
Query: 59 SEINRIIELSKGKVERGKVVN--YGDTIYVDTRLSKVYFLYPEIFGDHPFLYKIQTRIQD 116
EI +I +L+K K+ R V + G R+SK +L + D P + K+ R+Q
Sbjct: 349 EEIEKIKQLAKPKLARATVRDPKTGVLTVASYRVSKSSWLEED---DDPVVAKVNQRMQQ 405
Query: 117 MTNLVIGREERYKGPLQINNYGLGGHYDLHCD-------ATPRDEGLWRLASFMFYLTDV 169
+T L + E LQ+ NYG+GG Y+ H D +T + EG RLA+F+ Y++DV
Sbjct: 406 ITGLTVKTAEL----LQVANYGMGGQYEPHFDFSRRPFDSTLKSEGN-RLATFLNYMSDV 460
Query: 170 ELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 220
E GGAT+FP ++P+KG+AVFWYN + DYR H+ CPV +G KW
Sbjct: 461 EAGGATVFPDFGAAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPVLVGCKW 511
>sp|O15460|P4HA2_HUMAN Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1
SV=1
Length = 535
Score = 136 bits (342), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 124/232 (53%), Gaps = 19/232 (8%)
Query: 1 EIYPLACQGN-LSVPEDIKSNLKCFYESYNNT-FLKIGPLKVEELYLDPRVVKIHDAIYD 58
++Y C+G + + + L C Y N L I P K E+ + P +V+ +D + D
Sbjct: 288 DVYESLCRGEGVKLTPRRQKRLFCRYHHGNRAPQLLIAPFKEEDEWDSPHIVRYYDVMSD 347
Query: 59 SEINRIIELSKGKVERGKVVN--YGDTIYVDTRLSKVYFLYPEIFGDHPFLYKIQTRIQD 116
EI RI E++K K+ R V + G R+SK +L + D P + ++ R+Q
Sbjct: 348 EEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEED---DDPVVARVNRRMQH 404
Query: 117 MTNLVIGREERYKGPLQINNYGLGGHYDLHCDATPRDEGLW--------RLASFMFYLTD 168
+T L + E LQ+ NYG+GG Y+ H D + DE R+A+F+ Y++D
Sbjct: 405 ITGLTVKTAEL----LQVANYGVGGQYEPHFDFSRNDERDTFKHLGTGNRVATFLNYMSD 460
Query: 169 VELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 220
VE GGAT+FP L ++P+KG+AVFWYN + DYR H+ CPV +G KW
Sbjct: 461 VEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKW 512
>sp|Q60716|P4HA2_MOUSE Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2
SV=1
Length = 537
Score = 135 bits (341), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 125/232 (53%), Gaps = 19/232 (8%)
Query: 1 EIYPLACQGN-LSVPEDIKSNLKCFYESYNNT-FLKIGPLKVEELYLDPRVVKIHDAIYD 58
++Y C+G + + + L C Y N L I P K E+ + P +V+ +D + D
Sbjct: 290 DVYESLCRGEGVKLTPRRQKKLFCRYHHGNRVPQLLIAPFKEEDEWDSPHIVRYYDVMSD 349
Query: 59 SEINRIIELSKGKVERGKVVN--YGDTIYVDTRLSKVYFLYPEIFGDHPFLYKIQTRIQD 116
EI RI E++K K+ R V + G R+SK +L + D P + ++ R+Q
Sbjct: 350 EEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEED---DDPVVARVNRRMQH 406
Query: 117 MTNLVIGREERYKGPLQINNYGLGGHYDLHCD-ATPRDEGLW-------RLASFMFYLTD 168
+T L + E LQ+ NYG+GG Y+ H D + DE + R+A+F+ Y++D
Sbjct: 407 ITGLTVKTAEL----LQVANYGMGGQYEPHFDFSRSDDEDAFKRLGTGNRVATFLNYMSD 462
Query: 169 VELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 220
VE GGAT+FP L ++P+KG+AVFWYN + DYR H+ CPV +G KW
Sbjct: 463 VEAGGATVFPDLGAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKW 514
>sp|Q7Z4N8|P4HA3_HUMAN Prolyl 4-hydroxylase subunit alpha-3 OS=Homo sapiens GN=P4HA3 PE=1
SV=1
Length = 544
Score = 128 bits (322), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 118/208 (56%), Gaps = 12/208 (5%)
Query: 20 NLKCFYESYNNTFLKIGPLKVEELYLDPRVVKIHDAIYDSEINRIIELSKGKVERGKVVN 79
+L C YE+ +N +L + P++ E ++L+P + HD + DSE +I EL++ ++R V +
Sbjct: 319 SLYCSYETNSNAYLLLQPIRKEVIHLEPYIALYHDFVSDSEAQKIRELAEPWLQRSVVAS 378
Query: 80 YGDTIYVDTRLSKVYFLYPEIFGDHPFLYKIQTRIQDMTNLVIGREERYKGPLQINNYGL 139
+ V+ R+SK +L + P L + RI +T L + Y LQ+ NYG+
Sbjct: 379 GEKQLQVEYRISKSAWLKDTV---DPKLVTLNHRIAALTGLDV--RPPYAEYLQVVNYGI 433
Query: 140 GGHYDLHCD-ATPRDEGLWRL------ASFMFYLTDVELGGATIFPSLNLTVFPEKGSAV 192
GGHY+ H D AT L+R+ A+FM YL+ VE GGAT F NL+V + +A+
Sbjct: 434 GGHYEPHFDHATSPSSPLYRMKSGNRVATFMIYLSSVEAGGATAFIYANLSVPVVRNAAL 493
Query: 193 FWYNAHANTLLDYRMYHSGCPVALGNKW 220
FW+N H + D H+GCPV +G+KW
Sbjct: 494 FWWNLHRSGEGDSDTLHAGCPVLVGDKW 521
>sp|Q6W3F0|P4HA3_MOUSE Prolyl 4-hydroxylase subunit alpha-3 OS=Mus musculus GN=P4ha3 PE=2
SV=1
Length = 542
Score = 122 bits (307), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 120/222 (54%), Gaps = 13/222 (5%)
Query: 7 CQGNLSVPEDIK-SNLKCFYESYNNTFLKIGPLKVEELYLDPRVVKIHDAIYDSEINRII 65
CQ S P + +L C YE+ ++ +L + P + E ++L P + HD + D E +I
Sbjct: 303 CQTLGSQPTHYQIPSLYCSYETNSSPYLLLQPARKEVVHLRPLIALYHDFVSDEEAQKIR 362
Query: 66 ELSKGKVERGKVVNYGDTIYVDTRLSKVYFLYPEIFGDHPFLYKIQTRIQDMTNLVIGRE 125
EL++ ++R V + + V+ R+SK +L + P L + RI +T L I +
Sbjct: 363 ELAEPWLQRSVVASGEKQLQVEYRISKSAWLKDTV---DPMLVTLDHRIAALTGLDI--Q 417
Query: 126 ERYKGPLQINNYGLGGHYDLHCD-ATPRDEGLWRL------ASFMFYLTDVELGGATIFP 178
Y LQ+ NYG+GGHY+ H D AT L+R+ A+FM YL+ VE GGAT F
Sbjct: 418 PPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMKSGNRVATFMIYLSSVEAGGATAFI 477
Query: 179 SLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 220
N +V K +A+FW+N H + D H+GCPV +G+KW
Sbjct: 478 YGNFSVPVVKNAALFWWNLHRSGEGDGDTLHAGCPVLVGDKW 519
>sp|Q75UG4|P4HA3_BOVIN Prolyl 4-hydroxylase subunit alpha-3 OS=Bos taurus GN=P4HA3 PE=2
SV=1
Length = 544
Score = 120 bits (302), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 121/222 (54%), Gaps = 13/222 (5%)
Query: 7 CQGNLSVPEDIK-SNLKCFYESYNNTFLKIGPLKVEELYLDPRVVKIHDAIYDSEINRII 65
CQ S P + +L C YE+ ++ +L + P++ E ++L+P VV HD + D+E I
Sbjct: 305 CQTLGSQPTHYRIPSLYCSYETSSSPYLLLQPVRKEVIHLEPYVVLYHDFVSDAEAQTIR 364
Query: 66 ELSKGKVERGKVVNYGDTIYVDTRLSKVYFLYPEIFGDHPFLYKIQTRIQDMTNLVIGRE 125
L++ ++R V + + V+ R+SK +L + P L + RI +T L + +
Sbjct: 365 GLAEPWLQRSVVASGEKQLPVEYRISKSAWLKDTV---DPVLVTLDHRIAALTGLDV--Q 419
Query: 126 ERYKGPLQINNYGLGGHYDLHCD-ATPRDEGLWRL------ASFMFYLTDVELGGATIFP 178
Y LQ+ NYG+GGHY+ H D AT L+R+ A+FM YL+ VE GGAT F
Sbjct: 420 PPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYRMNSGNRVATFMIYLSSVEAGGATAFI 479
Query: 179 SLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 220
N +V K +A+FW+N H + D H+ CPV +G+KW
Sbjct: 480 YGNFSVPVVKNAALFWWNLHRSGEGDGDTLHAACPVLVGDKW 521
>sp|Q6W3E9|P4HA3_RAT Prolyl 4-hydroxylase subunit alpha-3 OS=Rattus norvegicus GN=P4ha3
PE=2 SV=1
Length = 544
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 118/222 (53%), Gaps = 13/222 (5%)
Query: 7 CQGNLSVPEDIK-SNLKCFYESYNNTFLKIGPLKVEELYLDPRVVKIHDAIYDSEINRII 65
CQ S P + +L C YE+ ++ +L + P + E ++L P V HD + D E +I
Sbjct: 305 CQTLGSQPTHYQIPSLYCSYETNSSPYLLLQPARKEVIHLRPLVALYHDFVSDEEAQKIR 364
Query: 66 ELSKGKVERGKVVNYGDTIYVDTRLSKVYFLYPEIFGDHPFLYKIQTRIQDMTNLVIGRE 125
EL++ ++R V + + V+ R+SK +L + P L + RI +T L I +
Sbjct: 365 ELAEPWLQRSVVASGEKQLQVEYRISKSAWLKDTV---DPVLVTLDRRIAALTGLDI--Q 419
Query: 126 ERYKGPLQINNYGLGGHYDLHCD-ATPRDEGLW------RLASFMFYLTDVELGGATIFP 178
Y LQ+ NYG+GGHY+ H D AT L+ R A+ M YL+ VE GGAT F
Sbjct: 420 PPYAEYLQVVNYGIGGHYEPHFDHATSPSSPLYKMKSGNRAATLMIYLSSVEAGGATAFI 479
Query: 179 SLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 220
N +V K +A+FW+N H + D H+GCPV +G+KW
Sbjct: 480 YGNFSVPVVKNAALFWWNLHRSGEGDDDTLHAGCPVLVGDKW 521
>sp|Q10576|P4HA1_CAEEL Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans
GN=dpy-18 PE=1 SV=2
Length = 559
Score = 117 bits (292), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 112/229 (48%), Gaps = 18/229 (7%)
Query: 2 IYPLACQGNLSVPEDIKSNLKCFYESYNNTFLKIGPLKVEELYLDPRVVKIHDAIYDSEI 61
+Y C+ + V + S L C+Y+ + FL P+KVE +P V D I D E+
Sbjct: 284 MYEALCRNEVPVSQKDISRLYCYYKR-DRPFLVYAPIKVEIKRFNPLAVLFKDVISDDEV 342
Query: 62 NRIIELSKGKVERGKVVN--YGDTIYVDTRLSKVYFLYPEIFGDHPFLYKIQTRIQDMTN 119
I EL+K K+ R V + G + R+SK +L E GD + + RI MTN
Sbjct: 343 AAIQELAKPKLARATVHDSVTGKLVTATYRISKSAWL-KEWEGD--VVETVNKRIGYMTN 399
Query: 120 LVIGREERYKGPLQINNYGLGGHYDLHCDATPRDEGLW--------RLASFMFYLTDVEL 171
L + E LQI NYG+GGHYD H D ++E R+A+ +FY++
Sbjct: 400 LEMETAEE----LQIANYGIGGHYDPHFDHAKKEESKSFESLGTGNRIATVLFYMSQPSH 455
Query: 172 GGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKW 220
GG T+F T+ P K A+FWYN + + H+ CPV +G KW
Sbjct: 456 GGGTVFTEAKSTILPTKNDALFWYNLYKQGDGNPDTRHAACPVLVGIKW 504
>sp|Q8BG58|P4HTM_MOUSE Transmembrane prolyl 4-hydroxylase OS=Mus musculus GN=P4htm PE=2
SV=1
Length = 503
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 66/170 (38%), Gaps = 53/170 (31%)
Query: 102 GDHPFLYKIQTRIQDMTNLVIGREERYKGPLQINNYGLGGHYDLHCDATP---------- 151
G H + I+ R+ +T L E + PLQ+ YG GGHY H D+ P
Sbjct: 286 GAHHVMRAIRQRVLRLTRLSPEIVE-FSEPLQVVRYGEGGHYHAHVDSGPVYPETICSHT 344
Query: 152 --------RDEGLWRLASFMFYLTDVELGGATIFPSL----------------------- 180
E R + +FYL +V GG T+FP
Sbjct: 345 KLVANESVPFETSCRYMTVLFYLNNVTGGGETVFPVADNRTYDEMSLIQDDVDLRDTRRH 404
Query: 181 ----NLTVFPEKGSAVFWYN------AHANTLLDYRMYHSGCPVALGNKW 220
NL V P++G+AVFWYN + DY + H GC V G KW
Sbjct: 405 CDKGNLRVKPQQGTAVFWYNYLPDGQGWVGEVDDYSL-HGGCLVTRGTKW 453
>sp|Q9NXG6|P4HTM_HUMAN Transmembrane prolyl 4-hydroxylase OS=Homo sapiens GN=P4HTM PE=1
SV=2
Length = 502
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 65/170 (38%), Gaps = 53/170 (31%)
Query: 102 GDHPFLYKIQTRIQDMTNLVIGREERYKGPLQINNYGLGGHYDLHCDATP---------- 151
G H + I+ R+ +T L E PLQ+ YG GGHY H D+ P
Sbjct: 285 GAHHIMRAIRQRVLRLTRLSPEIVE-LSEPLQVVRYGEGGHYHAHVDSGPVYPETICSHT 343
Query: 152 --------RDEGLWRLASFMFYLTDVELGGATIFPSL----------------------- 180
E R + +FYL +V GG T+FP
Sbjct: 344 KLVANESVPFETSCRYMTVLFYLNNVTGGGETVFPVADNRTYDEMSLIQDDVDLRDTRRH 403
Query: 181 ----NLTVFPEKGSAVFWYN------AHANTLLDYRMYHSGCPVALGNKW 220
NL V P++G+AVFWYN + DY + H GC V G KW
Sbjct: 404 CDKGNLRVKPQQGTAVFWYNYLPDGQGWVGDVDDYSL-HGGCLVTRGTKW 452
>sp|Q5UP57|P4H_MIMIV Putative prolyl 4-hydroxylase OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L593 PE=1 SV=1
Length = 242
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 17/188 (9%)
Query: 40 VEELYLDPRVVKIHDAIYDSEINRIIELSKGKVERGKVVNYGDTIYVDTRLSKVYFLYPE 99
+++ Y P V +++ I ++ I++ + GK+ +V++ D + R S+ +
Sbjct: 53 IDDPYNKPFV--LNNLINPTKCQEIMQFANGKLFDSQVLSGTDK---NIRNSQQMW---- 103
Query: 100 IFGDHPFLYKIQTRIQDMTNLVIGREERYKGPLQINNYGLGGHYDLHCDATPR-----DE 154
I ++P + I I N+ E + + N H+D CD++ + +
Sbjct: 104 ISKNNPMVKPIFENICRQFNVPFDNAEDLQVVRYLPNQYYNEHHDSCCDSSKQCSEFIER 163
Query: 155 GLWRLASFMFYLTDVELGGATIFPSLNLTVFPEKGSAVFWY--NAHANTLLDYRMYHSGC 212
G R+ + + YL + G T FP+LN P+ G A+ +Y ++N Y + H+G
Sbjct: 164 GGQRILTVLIYLNNEFSDGHTYFPNLNQKFKPKTGDALVFYPLANNSNKCHPYSL-HAGM 222
Query: 213 PVALGNKW 220
PV G KW
Sbjct: 223 PVTSGEKW 230
>sp|O35684|NEUS_MOUSE Neuroserpin OS=Mus musculus GN=Serpini1 PE=1 SV=1
Length = 410
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 90 LSKVYFLYPEIFGDHPFLYKIQTRIQDMTNLVIGR 124
+S++ LYP++ DHPFLY I+ R + L +GR
Sbjct: 360 ISRMAVLYPQVIVDHPFLYLIRNRKSGII-LFMGR 393
>sp|Q9J5D0|MP44_FOWPN Probable metalloendopeptidase G1-type OS=Fowlpox virus (strain
NVSL) GN=FPV081 PE=3 SV=1
Length = 626
Score = 32.7 bits (73), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Query: 156 LWRLASF--MFYLTDVELGGATIFPSLNLTVFPEK 188
+W+L S ++YLT ++LG + F T+FPEK
Sbjct: 550 MWKLKSLGLIYYLTSIKLGISNTFYIFAFTIFPEK 584
>sp|P59663|MASZ_SHIFL Malate synthase G OS=Shigella flexneri GN=glcB PE=3 SV=2
Length = 723
Score = 31.6 bits (70), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 56 IYDSEINRIIELSKGKVERGKVVNYGDTIYVDTRLSKVYFLYPEIFGDH--PFLYKIQTR 113
I+DSE N I E V G + Y + ++R VY + P++ G F K+ TR
Sbjct: 349 IWDSEGNEIPEGILDGVMTGAIALYDLKVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTR 408
Query: 114 IQDMTNLV 121
I+ M +
Sbjct: 409 IETMLGMA 416
>sp|P37330|MASZ_ECOLI Malate synthase G OS=Escherichia coli (strain K12) GN=glcB PE=1
SV=3
Length = 723
Score = 31.6 bits (70), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 56 IYDSEINRIIELSKGKVERGKVVNYGDTIYVDTRLSKVYFLYPEIFGDH--PFLYKIQTR 113
I+DSE N I E V G + Y + ++R VY + P++ G F K+ TR
Sbjct: 349 IWDSEGNEIPEGILDGVMTGAIALYDLKVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTR 408
Query: 114 IQDMTNLV 121
I+ M +
Sbjct: 409 IETMLGMA 416
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.143 0.443
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,574,862
Number of Sequences: 539616
Number of extensions: 3772092
Number of successful extensions: 7691
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 7624
Number of HSP's gapped (non-prelim): 29
length of query: 227
length of database: 191,569,459
effective HSP length: 113
effective length of query: 114
effective length of database: 130,592,851
effective search space: 14887585014
effective search space used: 14887585014
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)