Query psy6259
Match_columns 227
No_of_seqs 121 out of 1174
Neff 7.9
Searched_HMMs 29240
Date Fri Aug 16 21:47:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6259.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6259hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2jig_A Prolyl-4 hydroxylase; h 100.0 1.6E-51 5.6E-56 343.1 19.7 187 33-226 6-215 (224)
2 3itq_A Prolyl 4-hydroxylase, a 100.0 1.2E-50 3.9E-55 335.6 11.3 178 38-226 30-210 (216)
3 3dkq_A PKHD-type hydroxylase S 100.0 1.1E-34 3.8E-39 243.5 8.8 168 42-226 14-193 (243)
4 2hbt_A EGL nine homolog 1; pro 99.9 6.4E-25 2.2E-29 185.0 15.9 165 47-226 26-211 (247)
5 3kt7_A PKHD-type hydroxylase T 99.3 3.5E-11 1.2E-15 110.9 14.8 158 50-226 37-226 (633)
6 2rg4_A Uncharacterized protein 98.9 7.1E-09 2.4E-13 85.2 11.1 79 130-224 103-203 (216)
7 2a1x_A Phytanoyl-COA dioxygena 98.0 5E-05 1.7E-09 64.8 11.5 164 42-225 30-251 (308)
8 2fct_A Syringomycin biosynthes 97.8 1.4E-05 4.9E-10 68.4 4.4 161 43-223 18-255 (313)
9 2iuw_A Alkylated repair protei 97.7 0.0015 5E-08 54.1 15.6 161 48-224 41-226 (238)
10 2rdq_A 1-deoxypentalenic acid 97.7 6.1E-05 2.1E-09 63.5 6.1 77 140-226 134-250 (288)
11 3s57_A Alpha-ketoglutarate-dep 97.6 0.0019 6.6E-08 52.1 14.1 166 43-224 6-199 (204)
12 3emr_A ECTD; double stranded b 97.6 4.1E-05 1.4E-09 65.9 4.2 158 41-223 41-263 (310)
13 3nnf_A CURA; non-HAEM Fe(II)/a 97.6 4.9E-05 1.7E-09 64.6 4.0 142 30-178 17-176 (344)
14 3gja_A CYTC3; halogenase, beta 97.4 7.9E-05 2.7E-09 64.3 3.2 159 43-223 20-257 (319)
15 2opw_A Phyhd1 protein; double- 96.9 0.0022 7.5E-08 53.9 7.0 75 140-223 150-261 (291)
16 3tht_A Alkylated DNA repair pr 96.8 0.012 4E-07 51.3 11.0 134 43-196 107-260 (345)
17 3i3q_A Alpha-ketoglutarate-dep 95.3 0.16 5.5E-06 41.0 10.4 101 106-224 85-199 (211)
18 1dcs_A Deacetoxycephalosporin 81.8 8.2 0.00028 32.5 9.2 85 129-224 156-263 (311)
19 1w9y_A 1-aminocyclopropane-1-c 79.2 7.5 0.00026 32.9 8.1 83 131-224 156-249 (319)
20 3pl0_A Uncharacterized protein 74.1 6.9 0.00024 32.2 6.3 51 157-216 171-226 (254)
21 1gp6_A Leucoanthocyanidin diox 71.4 28 0.00096 29.7 9.8 83 130-224 210-303 (356)
22 1nx8_A CARC, carbapenem syntha 67.4 4.9 0.00017 32.8 4.0 38 181-226 231-270 (273)
23 3dqy_A Toluene 1,2-dioxygenase 66.6 11 0.00038 26.0 5.2 49 161-218 3-53 (106)
24 2wbq_A L-arginine beta-hydroxy 58.9 7 0.00024 33.4 3.5 38 181-226 296-337 (358)
25 2og5_A Putative oxygenase; non 58.8 6.4 0.00022 33.7 3.2 38 181-226 291-332 (357)
26 3o2g_A Gamma-butyrobetaine dio 56.3 8.8 0.0003 33.4 3.7 38 181-226 328-368 (388)
27 1otj_A Alpha-ketoglutarate-dep 56.0 8.2 0.00028 31.7 3.3 38 181-226 235-273 (283)
28 2qpz_A Naphthalene 1,2-dioxyge 55.6 22 0.00076 24.2 5.1 49 160-218 4-55 (103)
29 1vm9_A Toluene-4-monooxygenase 54.0 23 0.00078 24.6 5.0 48 162-218 4-55 (111)
30 4aiv_A Probable nitrite reduct 53.7 33 0.0011 24.4 5.9 52 157-217 7-62 (119)
31 2i7f_A Ferredoxin component of 52.4 34 0.0012 23.5 5.7 49 160-217 4-55 (108)
32 1ds1_A Clavaminate synthase 1; 51.6 10 0.00035 31.8 3.3 38 181-226 259-300 (324)
33 1otj_A Alpha-ketoglutarate-dep 49.1 14 0.0005 30.1 3.8 35 143-179 96-130 (283)
34 3pvj_A Alpha-ketoglutarate-dep 47.8 13 0.00044 30.6 3.3 37 141-179 92-128 (277)
35 3oox_A Putative 2OG-Fe(II) oxy 47.3 95 0.0033 25.7 8.7 82 130-223 169-266 (312)
36 3gce_A Ferredoxin component of 46.3 23 0.00079 25.1 4.1 49 160-217 11-61 (121)
37 1oih_A Putative alkylsulfatase 44.1 17 0.00057 30.1 3.4 38 140-179 102-139 (301)
38 3eat_X Pyoverdine biosynthesis 43.7 20 0.00068 29.7 3.8 38 181-226 241-279 (293)
39 3r1j_A Alpha-ketoglutarate-dep 42.9 16 0.00055 30.6 3.1 37 141-179 98-134 (301)
40 2de6_D Ferredoxin component of 40.8 37 0.0013 23.7 4.4 49 160-217 5-56 (115)
41 2q4a_A Clavaminate synthase-li 40.8 14 0.00046 31.1 2.4 35 181-224 293-327 (330)
42 2dbn_A Hypothetical protein YB 40.7 8.5 0.00029 34.4 1.1 61 156-225 296-401 (461)
43 1oih_A Putative alkylsulfatase 39.4 18 0.00063 29.8 3.0 38 181-226 244-282 (301)
44 1odm_A Isopenicillin N synthas 39.4 1E+02 0.0036 25.7 7.8 97 115-224 161-284 (331)
45 1nx8_A CARC, carbapenem syntha 39.1 20 0.0007 29.0 3.2 37 141-179 96-134 (273)
46 2q4a_A Clavaminate synthase-li 39.0 19 0.00064 30.2 3.0 38 140-179 114-151 (330)
47 1fqt_A Rieske-type ferredoxin 38.1 50 0.0017 22.8 4.7 49 160-217 6-56 (112)
48 1rie_A Rieske iron-sulfur prot 38.0 36 0.0012 24.5 4.0 21 188-217 62-82 (129)
49 3azc_A Cytochrome B6-F complex 44.0 6.9 0.00023 28.9 0.0 53 157-218 14-72 (133)
50 4b29_A Dimethylsulfoniopropion 37.2 79 0.0027 25.2 6.2 76 128-227 128-206 (217)
51 3rcq_A Aspartyl/asparaginyl be 37.1 1.1E+02 0.0039 23.8 7.1 77 130-223 102-178 (197)
52 3eat_X Pyoverdine biosynthesis 36.7 30 0.001 28.6 3.8 36 142-179 108-145 (293)
53 1rfs_A Rieske protein; iron-su 35.6 17 0.00059 26.7 2.0 44 165-217 28-77 (139)
54 2ozj_A Cupin 2, conserved barr 34.5 91 0.0031 21.0 5.7 68 132-223 40-107 (114)
55 3o2g_A Gamma-butyrobetaine dio 34.4 33 0.0011 29.6 3.9 36 142-179 199-234 (388)
56 3c0d_A Putative nitrite reduct 34.0 52 0.0018 23.1 4.3 50 160-218 6-59 (119)
57 3rns_A Cupin 2 conserved barre 33.9 1.2E+02 0.0043 23.5 7.0 72 132-226 155-226 (227)
58 3lwc_A Uncharacterized protein 33.6 91 0.0031 21.8 5.6 50 132-196 42-91 (119)
59 2wbq_A L-arginine beta-hydroxy 33.2 35 0.0012 28.9 3.8 36 141-179 163-198 (358)
60 2jo6_A Nitrite reductase [NAD( 32.8 62 0.0021 22.3 4.5 49 160-217 7-60 (113)
61 3gcf_A Terminal oxygenase comp 30.6 62 0.0021 28.3 4.9 52 157-218 32-86 (394)
62 3gkq_A Terminal oxygenase comp 30.5 61 0.0021 28.3 4.8 52 157-218 29-83 (389)
63 2og5_A Putative oxygenase; non 29.4 42 0.0014 28.5 3.6 37 141-179 174-210 (357)
64 2jza_A Nitrite reductase [NAD( 27.9 71 0.0024 22.8 4.2 49 160-217 4-57 (130)
65 2pp6_A Gifsy-2 prophage ATP-bi 26.9 39 0.0013 23.7 2.4 12 184-195 62-73 (102)
66 4aay_B AROB; oxidoreductase, r 25.8 78 0.0027 24.2 4.3 46 163-217 54-113 (175)
67 2opw_A Phyhd1 protein; double- 25.4 39 0.0013 27.4 2.6 27 43-70 12-38 (291)
68 2zyl_A Possible oxidoreductase 24.8 98 0.0034 26.6 5.2 52 158-218 24-78 (386)
69 1g8k_B Arsenite oxidase; molyb 24.4 1.2E+02 0.0042 21.7 4.9 45 163-216 11-69 (133)
70 3d89_A Rieske domain-containin 24.0 27 0.00093 26.0 1.3 51 158-218 15-68 (157)
71 3pvj_A Alpha-ketoglutarate-dep 23.5 45 0.0015 27.3 2.6 29 181-217 233-261 (277)
72 2de6_A Terminal oxygenase comp 22.8 99 0.0034 26.5 4.8 52 157-218 26-80 (392)
73 1z01_A 2-OXO-1,2-dihydroquinol 22.6 1.1E+02 0.0037 26.8 5.1 51 158-218 42-95 (446)
74 3gke_A DDMC; rieske cluster, n 22.1 80 0.0027 26.7 4.0 51 158-218 7-60 (349)
75 3r1j_A Alpha-ketoglutarate-dep 21.9 51 0.0017 27.4 2.7 28 181-216 237-264 (301)
76 1wgk_A Riken cDNA 2900073H19 p 20.8 1.2E+02 0.0043 21.2 4.2 36 162-216 74-113 (114)
No 1
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=100.00 E-value=1.6e-51 Score=343.13 Aligned_cols=187 Identities=27% Similarity=0.426 Sum_probs=172.9
Q ss_pred eeeCceEEEEeccCCcEEEEccCCCHHHHHHHHHHccCCeeecEEeecCCc--eeeeeeeeEEEEeCCCCCCCcHHHHHH
Q psy6259 33 LKIGPLKVEELYLDPRVVKIHDAIYDSEINRIIELSKGKVERGKVVNYGDT--IYVDTRLSKVYFLYPEIFGDHPFLYKI 110 (227)
Q Consensus 33 l~~~P~k~e~ls~~p~I~~~~~fls~~Ec~~li~~~~~~~~~s~~~~~~~~--~~~~~R~s~~~~l~~~~~~~~~~~~~i 110 (227)
..++|.|+|+||++|+|++++||||++||++|++++++.+++|++.++.++ ..+..|+|+.+|++. .+++++++|
T Consensus 6 ~~~~~~k~e~ls~~P~i~~~~~fLs~~Ec~~li~~~~~~~~~s~v~~~~~g~~~~~~~R~s~~~~l~~---~~~~~~~~i 82 (224)
T 2jig_A 6 KEEWRGEVVHLSWSPRAFLLKNFLSDEECDYIVEKARPKMVKSSVVDNESGKSVDSEIRTSTGTWFAK---GEDSVISKI 82 (224)
T ss_dssp -CCCCCCEEEEETTTTEEEETTCSCHHHHHHHHHHHGGGCEECEEEETTTTEEEECSSBCSEEEECCT---TCSHHHHHH
T ss_pred ccccCcceEEEeCCCCEEEEcccCCHHHHHHHHHHhhccCeeeeeecCCCCcccccCCEEEeeeEecC---CCCHHHHHH
Confidence 457899999999999999999999999999999999999999999877544 667899999999987 568999999
Q ss_pred HHHHHhccCCCcccccccCCceEEEEeCCCCcceeeeeCCCCC------CCCceEEEEEEeecCCCCCceeeeCCC----
Q psy6259 111 QTRIQDMTNLVIGREERYKGPLQINNYGLGGHYDLHCDATPRD------EGLWRLASFMFYLTDVELGGATIFPSL---- 180 (227)
Q Consensus 111 ~~ri~~~~g~~~~~~~~~~e~~~v~rY~~G~~y~~H~D~~~~~------~~~~R~~T~liYLnd~~~GGeT~Fp~~---- 180 (227)
.+||.+++|++.. .+|.+||+||++|++|++|+|.+... ..++|++|+++||||+++||||+||.+
T Consensus 83 ~~ri~~~~gl~~~----~~e~~qv~rY~~G~~y~~H~D~~~~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~~ 158 (224)
T 2jig_A 83 EKRVAQVTMIPLE----NHEGLQVLHYHDGQKYEPHYDYFHDPVNAGPEHGGQRVVTMLMYLTTVEEGGETVLPNAEQKV 158 (224)
T ss_dssp HHHHHHHHTCCGG----GBCCCEEEEEETTCCEEEECCSSCCTTSSSCCCCSCEEEEEEEECSCCSEECCEEETTSSSCC
T ss_pred HHHHHHHhCCCcc----cccceEEEecCCCccccCcccCCCCccccccccCCCeEEEEEEEecCCCCCCceeCCCccccc
Confidence 9999999999887 89999999999999999999997643 247999999999999999999999987
Q ss_pred -----------ceEEecccccEEEEEecCCCCCCCCccccccCCCccCeEEEEEecC
Q psy6259 181 -----------NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWGKLLLS 226 (227)
Q Consensus 181 -----------~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~ 226 (227)
+++|+|++|+||+|+|+.+||.+|++++|+||||++|+||+++.|+
T Consensus 159 ~~~~~~~c~~~~~~V~P~~G~al~f~~~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi 215 (224)
T 2jig_A 159 TGDGWSECAKRGLAVKPIKGDALMFYSLKPDGSNDPASLHGSCPTLKGDKWSATKWI 215 (224)
T ss_dssp CSTTSCTTGGGSEEECCCTTCEEEEESBCTTSCBCGGGCEEECCEEESEEEEEEEEE
T ss_pred ccccccccccCceEEecccCcEEEEEeeCCCCCCCCCCcccCCccccceEEEEEEeE
Confidence 5899999999999999999999999999999999999999999997
No 2
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=100.00 E-value=1.2e-50 Score=335.63 Aligned_cols=178 Identities=33% Similarity=0.488 Sum_probs=160.6
Q ss_pred eEEEEeccCCcEEEEccCCCHHHHHHHHHHccCCeeecEEeecCCceeeeeeeeEEEEeCCCCCCCcHHHHHHHHHHHhc
Q psy6259 38 LKVEELYLDPRVVKIHDAIYDSEINRIIELSKGKVERGKVVNYGDTIYVDTRLSKVYFLYPEIFGDHPFLYKIQTRIQDM 117 (227)
Q Consensus 38 ~k~e~ls~~p~I~~~~~fls~~Ec~~li~~~~~~~~~s~~~~~~~~~~~~~R~s~~~~l~~~~~~~~~~~~~i~~ri~~~ 117 (227)
+++++++.+|+|++++||||++||++|++++++.+++|++... ...++.|+|+.+|++. ++++++|++||.++
T Consensus 30 v~v~~l~~~P~i~~~~~fLs~~Ec~~Li~~a~~~l~~s~v~~~--~~~~~~RtS~~~wl~~-----~~~v~~i~~Ri~~~ 102 (216)
T 3itq_A 30 IQIISKFEEPLIVVLGNVLSDEECDELIELSKSKLARSKVGSS--RDVNDIRTSSGAFLDD-----NELTAKIEKRISSI 102 (216)
T ss_dssp EEEEEEETTTTEEEEESCSCHHHHHHHHHHHHHHHC----------CCCCGGGTTCEECCC-----CHHHHHHHHHHHHH
T ss_pred EEEEEeeCCCCEEEECCcCCHHHHHHHHHHhhcccccceeccC--CccCCcEeeeeEEeCC-----cHHHHHHHHHHHHh
Confidence 5788999999999999999999999999999988999988322 2456889999999975 78999999999999
Q ss_pred cCCCcccccccCCceEEEEeCCCCcceeeeeCCCCCC---CCceEEEEEEeecCCCCCceeeeCCCceEEecccccEEEE
Q psy6259 118 TNLVIGREERYKGPLQINNYGLGGHYDLHCDATPRDE---GLWRLASFMFYLTDVELGGATIFPSLNLTVFPEKGSAVFW 194 (227)
Q Consensus 118 ~g~~~~~~~~~~e~~~v~rY~~G~~y~~H~D~~~~~~---~~~R~~T~liYLnd~~~GGeT~Fp~~~~~v~P~~G~al~f 194 (227)
+|++.. ..|.+|+++|++||+|++|+|.+.... .++|++|+++||||+++||||+||.++++|+|++|+||+|
T Consensus 103 ~gl~~~----~~E~lqv~~Y~~G~~y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~~~~V~P~~G~al~f 178 (216)
T 3itq_A 103 MNVPAS----HGEGLHILNYEVDQQYKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKLNLSVHPRKGMAVYF 178 (216)
T ss_dssp HTSCGG----GBCCCEEEEECBTCCEEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETTTTEEECCCTTCEEEE
T ss_pred cCceec----cccceeEEEeCCCCccccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecCCCCEEecCCCeEEEE
Confidence 999887 899999999999999999999987532 4799999999999999999999999999999999999999
Q ss_pred EecCCCCCCCCccccccCCCccCeEEEEEecC
Q psy6259 195 YNAHANTLLDYRMYHSGCPVALGNKWGKLLLS 226 (227)
Q Consensus 195 ~~~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~ 226 (227)
+|+.+||.+|++++|+||||++|+||++++|+
T Consensus 179 ~~~~~~g~~d~~~lH~~~PV~~G~K~v~~~W~ 210 (216)
T 3itq_A 179 EYFYQDQSLNELTLHGGAPVTKGEKWIATQWV 210 (216)
T ss_dssp ECCCSSHHHHHTTCEEECCEEESCEEEEEEEE
T ss_pred eccCCCCCCCCccccccceeccccEEEEEeeE
Confidence 99999999999999999999999999999997
No 3
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=100.00 E-value=1.1e-34 Score=243.45 Aligned_cols=168 Identities=17% Similarity=0.204 Sum_probs=134.4
Q ss_pred EeccCCcEEEEccCCCHHHHHHHHHHcc-CCeeecEEeecCCceeeeeeeeEEEEeCCCCCCCcHHHHHHHHHHHhccCC
Q psy6259 42 ELYLDPRVVKIHDAIYDSEINRIIELSK-GKVERGKVVNYGDTIYVDTRLSKVYFLYPEIFGDHPFLYKIQTRIQDMTNL 120 (227)
Q Consensus 42 ~ls~~p~I~~~~~fls~~Ec~~li~~~~-~~~~~s~~~~~~~~~~~~~R~s~~~~l~~~~~~~~~~~~~i~~ri~~~~g~ 120 (227)
-+..++.+++++||||++||++|+++++ ..+.++.+..+. ....+|.+ .|+.. ++++++.|.++|.++++.
T Consensus 14 ~~~~~~~i~~i~dvLs~~Ec~~li~~~e~~~~~dg~~t~g~--~~~~vr~n--~~l~~----d~~~~~~l~~~i~~~l~~ 85 (243)
T 3dkq_A 14 NLYFQGMLIEIPNVFSKQEVSHLREQLDARRWIDGNQTSGA--MATTRKRN--QQLDK----DDPVAVALGQQIMDRLLA 85 (243)
T ss_dssp CCCCBTTBEEECCSSCHHHHHHHHHHHHTSCCEEECCCSSB--SSCCCEEE--EECCT----TCHHHHHHHHHHHHHHHT
T ss_pred ccccCCCEEEECCCCCHHHHHHHHHHHhhCCCccCcccCCC--ccccceee--eEECC----CCHHHHHHHHHHHHHHcc
Confidence 4567788999999999999999999996 456655543221 22344554 45665 578999999999998776
Q ss_pred Cccc----ccccCCceEEEEeCCCCcceeeeeCCCCCCC---CceEEEEEEeecC--CCCCceeeeCCC--ceEEecccc
Q psy6259 121 VIGR----EERYKGPLQINNYGLGGHYDLHCDATPRDEG---LWRLASFMFYLTD--VELGGATIFPSL--NLTVFPEKG 189 (227)
Q Consensus 121 ~~~~----~~~~~e~~~v~rY~~G~~y~~H~D~~~~~~~---~~R~~T~liYLnd--~~~GGeT~Fp~~--~~~v~P~~G 189 (227)
.... .....+.+|++||++|++|++|+|.+..... .+|.+|+++|||| +++||||+|+.. ..+|+|++|
T Consensus 86 ~~~f~~~~L~~~~e~~~~~rY~~G~~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G 165 (243)
T 3dkq_A 86 HPQFVSAALPLQFYPPLFNRYQGGETFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAG 165 (243)
T ss_dssp CHHHHHHHCEEEEEEEEEEEECTTCEEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTT
T ss_pred CcchhhcccccccccceEEEECCCCeeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCC
Confidence 5210 0115778999999999999999999865321 2679999999999 669999999975 589999999
Q ss_pred cEEEEEecCCCCCCCCccccccCCCccCeEEEEEecC
Q psy6259 190 SAVFWYNAHANTLLDYRMYHSGCPVALGNKWGKLLLS 226 (227)
Q Consensus 190 ~al~f~~~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~ 226 (227)
++|+|++ .++|+||||++|+||+++.|+
T Consensus 166 ~~v~F~s---------~~lH~v~pV~~G~R~~~~~Wi 193 (243)
T 3dkq_A 166 SLVLYPS---------SSLHQVTPVLSGERTAAFMWL 193 (243)
T ss_dssp CEEEEET---------TSEEEECCEEEECEEEEEEEE
T ss_pred EEEEECC---------CCeEcCccccccCEEEEEEeh
Confidence 9999997 489999999999999999997
No 4
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=99.93 E-value=6.4e-25 Score=185.03 Aligned_cols=165 Identities=16% Similarity=0.178 Sum_probs=120.3
Q ss_pred CcEEEEccCCCHHHHHHHHHHccC-----CeeecEEeecCCceeeeeeeeEEEEeCCCCCCCcHHHHHHHHHHHhc----
Q psy6259 47 PRVVKIHDAIYDSEINRIIELSKG-----KVERGKVVNYGDTIYVDTRLSKVYFLYPEIFGDHPFLYKIQTRIQDM---- 117 (227)
Q Consensus 47 p~I~~~~~fls~~Ec~~li~~~~~-----~~~~s~~~~~~~~~~~~~R~s~~~~l~~~~~~~~~~~~~i~~ri~~~---- 117 (227)
+.+++++|||+++||++|++.++. .++++.+.....+.....|.+...|++... ...+.+..+.++|.++
T Consensus 26 ~g~~Vid~fLs~ee~~~L~~~~~~~~~~g~~~~a~i~~~~~~~~~~iR~d~i~wl~~~~-~~~~~~~~l~~~i~~l~~~l 104 (247)
T 2hbt_A 26 HGICVVDDFLGKETGQQIGDEVRALHDTGKFTDGQLVSQKSDSSKDIRGDKITWIEGKE-PGCETIGLLMSSMDDLIRHC 104 (247)
T ss_dssp TSEEEESSSSCHHHHHHHHHHHHHHHHTTCSCSCCEEECCSSSTTCEECCEEEEECSCS-TTCHHHHHHHHHHHHHHHHT
T ss_pred CCEEEECCCCCHHHHHHHHHHHHhhhhcCCccccccccccccccccccccceeeecccc-cchhHHHHHHHHHHHHHHHH
Confidence 345799999999999999988863 477777765222255688999999998721 0122222233333332
Q ss_pred ---cCCCcccccccCCceEEEEeCC-CCcceeeeeCCCCCCCCceEEEEEEeecCC----CCCceeee-CCC---ceEEe
Q psy6259 118 ---TNLVIGREERYKGPLQINNYGL-GGHYDLHCDATPRDEGLWRLASFMFYLTDV----ELGGATIF-PSL---NLTVF 185 (227)
Q Consensus 118 ---~g~~~~~~~~~~e~~~v~rY~~-G~~y~~H~D~~~~~~~~~R~~T~liYLnd~----~~GGeT~F-p~~---~~~v~ 185 (227)
+|+..- ...+.+|+++|.+ |++|++|.|... ..+|.+|+++|||+. +.||+|.| +.. ...|.
T Consensus 105 n~~lGl~~i---~~~~e~~~~~Y~~~G~~y~~H~D~~~---~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~ 178 (247)
T 2hbt_A 105 NGKLGSYKI---NGRTKAMVACYPGNGTGYVRHVDNPN---GDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIE 178 (247)
T ss_dssp TTTSTTCCE---EEECCEEEEEECSSSCCEEEECSSCS---CCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEEC
T ss_pred hhhcCcccc---cccceEEEEEecCCCCcccccccCCC---CCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEE
Confidence 222110 0136699999996 999999999932 368999999999984 46999985 443 37899
Q ss_pred cccccEEEEEecCCCCCCCCccccccCCCccCeEEEEEecC
Q psy6259 186 PEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWGKLLLS 226 (227)
Q Consensus 186 P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G~K~i~~~W~ 226 (227)
|+.|++|+|.+. .+++|+++|+ .|.||+++.|+
T Consensus 179 P~~grlv~F~s~-------~~~~H~V~p~-~~~R~sit~W~ 211 (247)
T 2hbt_A 179 PKFDRLLFFWSD-------RRNPHEVQPA-YATRYAITVWY 211 (247)
T ss_dssp CBTTEEEEEECS-------TTCCEEECCB-SSCEEEEEEEE
T ss_pred cCCCEEEEEecC-------CCceeeeccC-CCEEEEEEEEE
Confidence 999999999973 3489999995 68999999997
No 5
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=99.30 E-value=3.5e-11 Score=110.94 Aligned_cols=158 Identities=19% Similarity=0.185 Sum_probs=102.4
Q ss_pred EEEccCCCHHHHHHHHHHcc--CCeeecEEeecCCceeeeeeeeEEEEeC---CCCCCCcHHHHH---------HHHHHH
Q psy6259 50 VKIHDAIYDSEINRIIELSK--GKVERGKVVNYGDTIYVDTRLSKVYFLY---PEIFGDHPFLYK---------IQTRIQ 115 (227)
Q Consensus 50 ~~~~~fls~~Ec~~li~~~~--~~~~~s~~~~~~~~~~~~~R~s~~~~l~---~~~~~~~~~~~~---------i~~ri~ 115 (227)
++++|||+++..+.|.+-+. -.+..... ...+-.++.+.+-++ .+.....+.+.+ +..-|.
T Consensus 37 ~VIdnfl~d~lle~V~~Efp~~i~f~~Ket-----DlYk~~QsgdLanl~~l~~e~l~~lp~l~~Lr~~L~S~~Fr~~Ls 111 (633)
T 3kt7_A 37 GTIHELVNDDLLRAVRKEIETEIHFTKKET-----DIYRVNQSGDLANLSGLDWDDLSRLPNLFKLRQILYSKQYRDFFG 111 (633)
T ss_dssp EEESSCBCHHHHHHHHHHHHHHCCCEEEEC-----SSEEEEECCCTTCTTSCCTTCCTTCHHHHHHHHHHTSHHHHHHHH
T ss_pred EEECCCCCHHHHHHHHHHhhhccCcccccc-----cccceeccccccccccCChhhhccChHHHHHHHHHhcHHHHHHHH
Confidence 58999999999999988774 23322110 000011111000000 000011133333 334455
Q ss_pred hccCC-CcccccccCCceEEEEeCCCCcceeeeeCCCCCCCCceEEEEEEeecCC------CCCceeeeCCC--------
Q psy6259 116 DMTNL-VIGREERYKGPLQINNYGLGGHYDLHCDATPRDEGLWRLASFMFYLTDV------ELGGATIFPSL-------- 180 (227)
Q Consensus 116 ~~~g~-~~~~~~~~~e~~~v~rY~~G~~y~~H~D~~~~~~~~~R~~T~liYLnd~------~~GGeT~Fp~~-------- 180 (227)
+++|+ +.. +..-++++.+|.+|+||.+|.|.. +.|.+|+++|||+. +.||++++...
T Consensus 112 ~iTGi~~Ls---g~~~D~~~a~Y~~G~fL~~H~D~~-----~~RrvS~VLYLN~pd~~W~~e~GGeL~Lyd~d~~~~P~~ 183 (633)
T 3kt7_A 112 YVTKAGKLS---GSKTDMSINTYTKGCHLLTHDDVI-----GSRRISFILYLPDPDRKWKSHYGGGLRLFPSILPNVPHS 183 (633)
T ss_dssp HHHTCCCCC---SSCCCEEEEEECTTCEEEEECCCC-----TTEEEEEEEECSCTTSCCCGGGBCCEEECCEEETTEECS
T ss_pred HHhCCcccC---CCceeEEEEEeCCCCeeeecCCCC-----CCeEEEEEEEcCCCCCCCCccCCceEEEecCCCcCCCCC
Confidence 67887 331 123458999999999999999964 45999999999983 36999986442
Q ss_pred --ceEEecccccEEEEEecCCCCCCCCccccccCCCc-cCeEEEEEecC
Q psy6259 181 --NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVA-LGNKWGKLLLS 226 (227)
Q Consensus 181 --~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~-~G~K~i~~~W~ 226 (227)
..+|.|..|+++||...- ..++|++.||. ...|+.+++||
T Consensus 184 d~~~~I~P~fNrLV~F~vsp------~~S~H~V~eV~~~~~RlSItGWF 226 (633)
T 3kt7_A 184 DPSAKLVPQFNQIAFFKVLP------GFSFHDXEEVKVDKHRLSIQGWY 226 (633)
T ss_dssp SCSEEECCCTTEEEEEECCT------TTCCEEECCBCSSCCEEEEEEEE
T ss_pred CceEEEecCCCeEEEEEcCC------CCCcCCCCccCCCCCEEEEEEEe
Confidence 347999999999999830 15999999998 55899999997
No 6
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=98.93 E-value=7.1e-09 Score=85.19 Aligned_cols=79 Identities=18% Similarity=0.133 Sum_probs=66.5
Q ss_pred CceEEEEeCCCCcceeeeeCCCCCCCCceEEEEEEeecCCCCCceeeeCCC--------------------c-eEEeccc
Q psy6259 130 GPLQINNYGLGGHYDLHCDATPRDEGLWRLASFMFYLTDVELGGATIFPSL--------------------N-LTVFPEK 188 (227)
Q Consensus 130 e~~~v~rY~~G~~y~~H~D~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~--------------------~-~~v~P~~ 188 (227)
...-+++|.+|+++++|.+ .++.+|.++|||.++.||++.|..- . ..|+|+.
T Consensus 103 ~~~W~~~~~~G~~~~~H~H-------~~~~lSgV~Yl~~p~~~G~L~f~~p~~~~~~~~~~~~~~~~~~~~~~~~i~P~~ 175 (216)
T 2rg4_A 103 EDIWINILPEGGVHGSHIH-------PHSVISGTTYVAMPEGTSALKLEDPRLPFMMAAPTRRKGAREELRTFRSVAPKV 175 (216)
T ss_dssp EEEEEEEECTTCCEEEECC-------TTCSEEEEEEEECCSCSCCEEEECTTGGGCSSSCCCCCCSCGGGCSEEEECCCT
T ss_pred eeEEEEEcCCCCcccCccC-------CCCeEEEEEEEECCCCCccEEEeCCccccccccCcccccCcccCCCeeEecCCC
Confidence 3466789999999999998 3578999999999889999999542 1 3799999
Q ss_pred ccEEEEEecCCCCCCCCccccccCCCcc-CeEEEEEe
Q psy6259 189 GSAVFWYNAHANTLLDYRMYHSGCPVAL-GNKWGKLL 224 (227)
Q Consensus 189 G~al~f~~~~~~g~~d~~~~H~g~pV~~-G~K~i~~~ 224 (227)
|++|+|++ ...|++.|..+ +.|+++..
T Consensus 176 G~lvlFpS---------~l~H~V~p~~~~~~RiSIsF 203 (216)
T 2rg4_A 176 GDVLLWES---------WLRHEVPMNMAEEDRISVSF 203 (216)
T ss_dssp TEEEEEET---------TSCEEECCCCSSSCEEEEEE
T ss_pred CeEEEECC---------CCEEeccCCCCCCCEEEEEE
Confidence 99999998 59999999886 58887764
No 7
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=98.01 E-value=5e-05 Score=64.81 Aligned_cols=164 Identities=16% Similarity=0.105 Sum_probs=90.0
Q ss_pred EeccCCcEEEEccCCCHHHHHHHHHHccCCee-----ecEE-----eecCCc-eeeeeeeeEE-EEeCCCCCCCcHHHH-
Q psy6259 42 ELYLDPRVVKIHDAIYDSEINRIIELSKGKVE-----RGKV-----VNYGDT-IYVDTRLSKV-YFLYPEIFGDHPFLY- 108 (227)
Q Consensus 42 ~ls~~p~I~~~~~fls~~Ec~~li~~~~~~~~-----~s~~-----~~~~~~-~~~~~R~s~~-~~l~~~~~~~~~~~~- 108 (227)
.+..+.+ ++++++|+++||+++.+.++..+. +... ...... .......... .| ..++.+.
T Consensus 30 ~f~~dGy-vvl~~~l~~e~v~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 102 (308)
T 2a1x_A 30 FYEENGF-LVIKNLVPDADIQRFRNEFEKICRKEVKPLGLTVMRDVTISKSEYAPSEKMITKVQDF------QEDKELFR 102 (308)
T ss_dssp HHHHHSE-EEETTCSCHHHHHHHHHHHHHHHTTSCCCSSCEEECCEEECCCE-----EECCEEECC------TTSHHHHH
T ss_pred HHHhCCE-EEccCCCCHHHHHHHHHHHHHHHhccccCCCccccccccccccccCchHHHHhhhhhh------hhCHHHHH
Confidence 4555666 599999999999999887653111 1100 000000 0000001111 12 1234332
Q ss_pred -----HHHHHHHhccCCCcccccccCCceEEEEeC-CCCc---ceeeeeCCCCCC-CCceEEEEEEeecCCC-CCceeee
Q psy6259 109 -----KIQTRIQDMTNLVIGREERYKGPLQINNYG-LGGH---YDLHCDATPRDE-GLWRLASFMFYLTDVE-LGGATIF 177 (227)
Q Consensus 109 -----~i~~ri~~~~g~~~~~~~~~~e~~~v~rY~-~G~~---y~~H~D~~~~~~-~~~R~~T~liYLnd~~-~GGeT~F 177 (227)
+|...+.+++|-++. ......+.+.. .|+. ..||.|...-.. ...+.+|+.|+|.|+. ++|.|.|
T Consensus 103 l~~~p~l~~~~~~llG~~~~----~~~~~~~~k~P~~g~~~~~~~wHqD~~~~~~~p~~~~v~~wiaL~D~~~enG~l~~ 178 (308)
T 2a1x_A 103 YCTLPEILKYVECFTGPNIM----AMHTMLINKPPDSGKKTSRHPLHQDLHYFPFRPSDLIVCAWTAMEHISRNNGCLVV 178 (308)
T ss_dssp HHHCHHHHHHHHHHHCSSEE----EEEEEEEEECCC--------CCBCGGGGCCEECGGGEEEEEEESSCBCTTBTCEEE
T ss_pred HHhCHHHHHHHHHhcCCCcc----eecceEEEcCCCCCCCccCCCCccCCccccCCCCCCeEEEEEEeeccCCCCCcEEE
Confidence 244455566774432 22222333332 2332 479999853221 1247899999999975 5676754
Q ss_pred -CC--------------------------------CceEEecccccEEEEEecCCCCCCCCccccccCCCcc-CeEEEEE
Q psy6259 178 -PS--------------------------------LNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVAL-GNKWGKL 223 (227)
Q Consensus 178 -p~--------------------------------~~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~-G~K~i~~ 223 (227)
|. ..+.+.-++|++|||.. +++|++.|..+ ..|++++
T Consensus 179 vPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~aGd~vlf~~---------~~~H~s~~N~s~~~R~~~~ 249 (308)
T 2a1x_A 179 LPGTHKGSLKPHDYPKWEGGVNKMFHGIQDYEENKARVHLVMEKGDTVFFHP---------LLIHGSGQNKTQGFRKAIS 249 (308)
T ss_dssp CTTGGGSCCCCCCC-----------CCCCC-CCCSCCEEECBCTTCEEEECT---------TCCEEECCBCSSSCEEEEE
T ss_pred EcCCCCCccccccccccccCccccccCCccccccCCeEEccCCCccEEEECC---------CccccCCCCCCCCceEEEE
Confidence 21 12456779999999977 69999999876 4777766
Q ss_pred ec
Q psy6259 224 LL 225 (227)
Q Consensus 224 ~W 225 (227)
.-
T Consensus 250 ~~ 251 (308)
T 2a1x_A 250 CH 251 (308)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 8
>2fct_A Syringomycin biosynthesis enzyme 2; mononuclear iron, cupin, halogenase, biosynthetic protein; HET: DSU AKG; 1.60A {Pseudomonas syringae PV} SCOP: b.82.2.9 PDB: 2fcu_A* 2fcv_A*
Probab=97.80 E-value=1.4e-05 Score=68.35 Aligned_cols=161 Identities=15% Similarity=0.114 Sum_probs=88.4
Q ss_pred eccCCcEEEEccCCCHHHHHHHHHHccCCeee--cEEeecCCcee-eeeeeeEEEEeCCCCCCCcHHH------HHHHHH
Q psy6259 43 LYLDPRVVKIHDAIYDSEINRIIELSKGKVER--GKVVNYGDTIY-VDTRLSKVYFLYPEIFGDHPFL------YKIQTR 113 (227)
Q Consensus 43 ls~~p~I~~~~~fls~~Ec~~li~~~~~~~~~--s~~~~~~~~~~-~~~R~s~~~~l~~~~~~~~~~~------~~i~~r 113 (227)
+..+.+ ++++++|+++||+++.+.+...+.. ..+........ ...|.....+. ..+.+ ..|...
T Consensus 18 f~~dGy-vvl~~~l~~e~v~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~p~l~~~ 90 (313)
T 2fct_A 18 FEKNGF-IGPFDAYSPEEMKETWKRTRLRLLDRSAAAYQDLDAISGGTNIANYDRHL------DDDFLASHICRPEICDR 90 (313)
T ss_dssp HHHHSE-EEEEESSCHHHHHHHHHHHHHHHTCCTTCSCCCCCC----CGGGGBCGGG------TCHHHHHHTTCHHHHHH
T ss_pred HHhCCE-EECCCCCCHHHHHHHHHHHHHHHhcccccccccccccCCccchhcccccc------ccHHHHHHHcChHHHHH
Confidence 445666 5999999999999998665422211 01111100000 00011100010 12222 234555
Q ss_pred HHhccCCCcccccccCCceEEEEeCCCCcceeeeeCCCCCCCC----------c--eEEEEEEeecCCC-CCceeee-CC
Q psy6259 114 IQDMTNLVIGREERYKGPLQINNYGLGGHYDLHCDATPRDEGL----------W--RLASFMFYLTDVE-LGGATIF-PS 179 (227)
Q Consensus 114 i~~~~g~~~~~~~~~~e~~~v~rY~~G~~y~~H~D~~~~~~~~----------~--R~~T~liYLnd~~-~GGeT~F-p~ 179 (227)
+.+++|-++. .....-+.+...++...||.|...-...+ . +.+|+.|+|.|+. +.|.|.| |.
T Consensus 91 ~~~llG~~~~----~~~~~~~~k~Pg~~~~~wHqD~~~~~~~g~p~~~~p~~~~~~~~l~~wiaL~D~~~enG~l~~vPG 166 (313)
T 2fct_A 91 VESILGPNVL----CWRTEFFPKYPGDEGTDWHQADTFANASGKPQIIWPENEEFGGTITVWTAFTDANIANGCLQFIPG 166 (313)
T ss_dssp HHHHHCSCEE----EEEEEEEEECTTCCEECCBCCSSSCTTTSSCSEECCTTSCCCSCEEEEEESSCBCTTBTCEEEETT
T ss_pred HHHHcCCCeE----eeeeeEEEeCCCCCCCCccccccccccCCCccccccccccccCeEEEEEEeccCCccCCCEEEEcC
Confidence 5667774432 22222233333234468999985421111 1 6899999999975 4566654 21
Q ss_pred C---------------------------------------------------ceEEecccccEEEEEecCCCCCCCCccc
Q psy6259 180 L---------------------------------------------------NLTVFPEKGSAVFWYNAHANTLLDYRMY 208 (227)
Q Consensus 180 ~---------------------------------------------------~~~v~P~~G~al~f~~~~~~g~~d~~~~ 208 (227)
. .+.+.-++|++|||.. +++
T Consensus 167 SH~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~aGd~v~f~~---------~l~ 237 (313)
T 2fct_A 167 TQNSMNYDETKRMTYEPDANNSVVKDGVRRGFFGYDYRQLQIDENWKPDEASAVPMQMKAGQFIIFWS---------TLM 237 (313)
T ss_dssp CTTSCCBCTTSCCCCCTTTCSSCEETTEEEEBTTBCGGGGBSSTTCCCCGGGCEEECBCTTEEEEEET---------TSE
T ss_pred CCcCCccccccccccChhhhhhhhhccccccccccchhhhccccccCCccCceeEeeeCCceEEEEeC---------Cce
Confidence 0 1456679999999987 699
Q ss_pred cccCCCc--cC-eEEEEE
Q psy6259 209 HSGCPVA--LG-NKWGKL 223 (227)
Q Consensus 209 H~g~pV~--~G-~K~i~~ 223 (227)
|++.|.. ++ .|+++.
T Consensus 238 H~s~~N~~ss~~~R~a~~ 255 (313)
T 2fct_A 238 HASYPHSGESQEMRMGFA 255 (313)
T ss_dssp EEECCBCSSSSSCEEEEE
T ss_pred eeCCCCCCCCCCceEEEE
Confidence 9999998 44 666654
No 9
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=97.74 E-value=0.0015 Score=54.08 Aligned_cols=161 Identities=17% Similarity=0.083 Sum_probs=92.6
Q ss_pred cEEEEccCCCHHHHHHHHHHcc--CCeeecEEeecCCceeeeeeeeEEEEeCCCCC-----------CCcHHHHHHHHHH
Q psy6259 48 RVVKIHDAIYDSEINRIIELSK--GKVERGKVVNYGDTIYVDTRLSKVYFLYPEIF-----------GDHPFLYKIQTRI 114 (227)
Q Consensus 48 ~I~~~~~fls~~Ec~~li~~~~--~~~~~s~~~~~~~~~~~~~R~s~~~~l~~~~~-----------~~~~~~~~i~~ri 114 (227)
.+.++++||+++|.++|.+... ..+.......... .....|. .+|...... .-.+.+..|.+++
T Consensus 41 gl~~~~~fl~~~e~~~Ll~~l~~~~~w~~~~~~~~g~-~~~~~R~--~~~~g~~~Y~Ys~~~~~~~p~wp~~l~~l~~~~ 117 (238)
T 2iuw_A 41 RVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDI-TYQQPRL--TAWYGELPYTYSRITMEPNPHWHPVLRTLKNRI 117 (238)
T ss_dssp EEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEESSSC-EEECSSE--EEEEECCCTTSCHHHHCCBSSCCHHHHHHHHHH
T ss_pred cEEEECCCCCHHHHHHHHHHHHHhCCCccCceecCCc-ccccCCe--eEEcCCCccccCCcccCCCCCCCHHHHHHHHHH
Confidence 5899999999999999988763 2343332221111 1111122 124331000 1235677788888
Q ss_pred HhccCCCcccccccCCceEEEEeCCCC-cceeeeeCCCCCCCCceEEEEEE--------eecCCC-CCceeeeCCCceEE
Q psy6259 115 QDMTNLVIGREERYKGPLQINNYGLGG-HYDLHCDATPRDEGLWRLASFMF--------YLTDVE-LGGATIFPSLNLTV 184 (227)
Q Consensus 115 ~~~~g~~~~~~~~~~e~~~v~rY~~G~-~y~~H~D~~~~~~~~~R~~T~li--------YLnd~~-~GGeT~Fp~~~~~v 184 (227)
++++|.. .....|..|..|+ .-.||.|.......+..++|+.+ .-.+.. ++|.. -....++|
T Consensus 118 ~~~~g~~-------~n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IaslSLG~~~~f~f~~~~~~~~~~~~-~~~~~~~i 189 (238)
T 2iuw_A 118 EENTGHT-------FNSLLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKPPPEENGDY-TYVERVKI 189 (238)
T ss_dssp HHHHSCC-------CCEEEEEEECSTTCCEEEECCCCGGGCSSCCEEEEEEESCEEEEEEECCC---------CCCEEEE
T ss_pred HHHhCCC-------CCEEEEEEECCCCCceeCCcCChhhcCCCCcEEEEECCCCEEEEEeccCCccccCcc-cCCceEEE
Confidence 8877653 3456888999997 99999998543212345555442 111111 11110 01234689
Q ss_pred ecccccEEEEEecCCCCCCCCccccccCCCc--cCeEEEEEe
Q psy6259 185 FPEKGSAVFWYNAHANTLLDYRMYHSGCPVA--LGNKWGKLL 224 (227)
Q Consensus 185 ~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~--~G~K~i~~~ 224 (227)
.-..|++|++.-.. .....|++.+.. .+.|+.+|.
T Consensus 190 ~L~~gsllvM~G~~-----r~~w~H~I~~~~~~~~~RIsLTf 226 (238)
T 2iuw_A 190 PLDHGTLLIMEGAT-----QADWQHRVPKEYHSREPRVNLTF 226 (238)
T ss_dssp EECTTCEEEEEETH-----HHHEEEEECCCSSCCCCEEEEEE
T ss_pred EcCCCCEEEEChhh-----hCccEecCCCcCCCCCCEEEEEe
Confidence 99999999998632 113469988763 678887764
No 10
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=97.66 E-value=6.1e-05 Score=63.49 Aligned_cols=77 Identities=14% Similarity=0.035 Sum_probs=56.1
Q ss_pred CCcceeeeeCCCCCCCCceEEEEEEeecCCC-CCceeee-CCC----------------------------------ceE
Q psy6259 140 GGHYDLHCDATPRDEGLWRLASFMFYLTDVE-LGGATIF-PSL----------------------------------NLT 183 (227)
Q Consensus 140 G~~y~~H~D~~~~~~~~~R~~T~liYLnd~~-~GGeT~F-p~~----------------------------------~~~ 183 (227)
|....||.|..... ...+.+|+.|+|.|+. +.|.|.| |.. .+.
T Consensus 134 g~~~~wHqD~~~~~-~~~~~v~~wiaL~d~~~enG~l~vvPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 212 (288)
T 2rdq_A 134 HYLTPFHQDGFYIG-PNQDFRTFWIPLIRTTRESGGVALADGSHRRGKRDHVLNESFRRFGHPVRGIPPTEVSEDEHLLH 212 (288)
T ss_dssp TTSCCSBCHHHHSC-SCCCCEEEEEESSCCCTTTCEEEEETTTTSSCCCCCEEEEEEEETTEEEEECCGGGSCTTSCEEC
T ss_pred CCCcCccccccccC-CCCCeEEEEEECCCCCccCCcEEEEeCCccccccccccchhhhccCcccccCCCccccccCceee
Confidence 45678999985432 2447899999999975 5676654 321 023
Q ss_pred EecccccEEEEEecCCCCCCCCccccccCCCccC----eEEEEEecC
Q psy6259 184 VFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALG----NKWGKLLLS 226 (227)
Q Consensus 184 v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G----~K~i~~~W~ 226 (227)
+.-++|++|||.. +++|++.|..+. .||++..|+
T Consensus 213 ~~~~aGdv~lf~~---------~~~H~s~~N~s~~~R~~R~s~~~~~ 250 (288)
T 2rdq_A 213 SPMEPGDILLFHA---------HMCHKSIPNLSKDPRLMRMSMDTRV 250 (288)
T ss_dssp CCCCTTCEEEEET---------TCCEEEECCCCCTTCCCEEEEEEEE
T ss_pred cccCCCCEEEEeC---------CceecCCCCCCCCccceEEEEEEEE
Confidence 4558999999987 699999999886 368887775
No 11
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=97.61 E-value=0.0019 Score=52.09 Aligned_cols=166 Identities=16% Similarity=0.049 Sum_probs=94.9
Q ss_pred eccCCcEEEEccCCCHHHHHHHHHHcc--CCe---eecEEeecCCceeeeeeeeEEEEeCCCC------------CCCcH
Q psy6259 43 LYLDPRVVKIHDAIYDSEINRIIELSK--GKV---ERGKVVNYGDTIYVDTRLSKVYFLYPEI------------FGDHP 105 (227)
Q Consensus 43 ls~~p~I~~~~~fls~~Ec~~li~~~~--~~~---~~s~~~~~~~~~~~~~R~s~~~~l~~~~------------~~~~~ 105 (227)
+-.....+.+++||+++|+++|.+... ..+ +...+.-.+ .....-|. .+|..+.. ..-.+
T Consensus 6 ~~~~~~~~~~~~~l~~~~a~~l~~~l~~~~~w~~~~~~~~~~~g-k~~~~pR~--~~wyg~~~~~Y~Ysg~~~~~~pwp~ 82 (204)
T 3s57_A 6 IRAEGLDSSYTVLFGKAEADEIFQELEKEVEYFTGALARVQVFG-KWHSVPRK--QATYGDAGLTYTFSGLTLSPKPWIP 82 (204)
T ss_dssp EEETTEEEEEEECSCHHHHHHHHHHHHHHCCCCCGGGGEEEETT-EEEECSSE--EEEEECTTCCEEETTEEECCEECCH
T ss_pred eeeCCceEEecCcCCHHHHHHHHHHHHHhCCCCCcccceEEECC-eEeccCcE--EEEECCCCCCcccCCCcccCCCCCH
Confidence 445666788999999999999987652 344 222222111 01111121 12322200 01157
Q ss_pred HHHHHHHHHHhccCCCcccccccCCceEEEEeCCCC-cceeeeeCCCCCCCCceEEEEEE--------eecCCCCCceee
Q psy6259 106 FLYKIQTRIQDMTNLVIGREERYKGPLQINNYGLGG-HYDLHCDATPRDEGLWRLASFMF--------YLTDVELGGATI 176 (227)
Q Consensus 106 ~~~~i~~ri~~~~g~~~~~~~~~~e~~~v~rY~~G~-~y~~H~D~~~~~~~~~R~~T~li--------YLnd~~~GGeT~ 176 (227)
.+..|.+++++++|..+ ....+..|..|+ .-.+|.|....-..+.-++|+.+ --.+..+.|...
T Consensus 83 ~L~~l~~~~~~~~g~~~-------n~~LvN~Y~~G~d~i~~H~D~~~~~~~~~~IasvSLG~~~~f~~~~~~~~~~~~~~ 155 (204)
T 3s57_A 83 VLERIRDHVSGVTGQTF-------NFVLINRYKDGSDHICEHRDDERELAPGSPIASVSFGASRDFVFRHKDSRGKSPSR 155 (204)
T ss_dssp HHHHHHHHHHHHHCCCC-------SEEEEEEESSTTCCEEEECCCCTTBCTTCCEEEEEEESCEEEEEEEGGGCSSSCSC
T ss_pred HHHHHHHHHHHHhCCCC-------ceeEEEEECCCCCcccceecChhhccCCCcEEEEECCCceEEEEEEcCCCcccccc
Confidence 88899999988888643 346788999999 89999998643212334444332 211111111111
Q ss_pred eCCCceEEecccccEEEEEecCCCCCCCCccccccCCCc--cCeEEEEEe
Q psy6259 177 FPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVA--LGNKWGKLL 224 (227)
Q Consensus 177 Fp~~~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~--~G~K~i~~~ 224 (227)
....+.|.-..|+++++.... .....|++-+.. .|.|+.+|.
T Consensus 156 -~~~~~~~~L~~GsllvM~g~~-----q~~w~H~Ip~~~~~~~~RislTF 199 (204)
T 3s57_A 156 -RVAVVRLPLAHGSLLMMNHPT-----NTHWYHSLPVRKKVLAPRVNLTF 199 (204)
T ss_dssp -CCCCEEEEECTTEEEEEETTH-----HHHEEEEECCCTTCCSCEEEEEE
T ss_pred -CCceEEEECCCCCEEEECchh-----hheeEeeccccCCCCCCEEEEEe
Confidence 012468999999999997521 112457776654 278887774
No 12
>3emr_A ECTD; double stranded beta helix, oxidoreductase; HET: MSE; 1.85A {Virgibacillus salexigens}
Probab=97.60 E-value=4.1e-05 Score=65.87 Aligned_cols=158 Identities=13% Similarity=0.152 Sum_probs=89.4
Q ss_pred EEeccCCcEEEEccCCCHHHHHHHHHHccCCeee-------cEEeecCCceeeeeeeeEEEEeCCCCCCCcHHHHH----
Q psy6259 41 EELYLDPRVVKIHDAIYDSEINRIIELSKGKVER-------GKVVNYGDTIYVDTRLSKVYFLYPEIFGDHPFLYK---- 109 (227)
Q Consensus 41 e~ls~~p~I~~~~~fls~~Ec~~li~~~~~~~~~-------s~~~~~~~~~~~~~R~s~~~~l~~~~~~~~~~~~~---- 109 (227)
+.+..+.+ ++++++|+++||+.|.+.++..+.. ..+....+ ...|. ...+.. .++.+..
T Consensus 41 ~~f~~dGy-vvi~~~ls~eev~~lr~~i~~~~~~~~~~~~~~~~~~~~~---~~~r~--~~~~~~----~~~~f~~l~~~ 110 (310)
T 3emr_A 41 DSYEKNGF-LQIKNFFSEDEVIDMQKAIFELQDSIKDVASDKVIREPES---NDIRS--IFHVHQ----DDNYFQDVAND 110 (310)
T ss_dssp HHHHHHSE-EEETTCSCHHHHHHHHHHHHHHHHHTTTCCCTTEEECTTT---CCEEE--EECHHH----HCHHHHHHHTC
T ss_pred HHHHhCCE-EEccCCCCHHHHHHHHHHHHHHHhcccccCCccceecCCC---cceeE--Eeehhh----ccHHHHHHHhC
Confidence 34555777 5899999999999999887532211 11211111 01221 111111 2233332
Q ss_pred --HHHHHHhccCCCcccccccCCceEEEEeC---CCCcceeeeeCCCCC----CCCceEEEEEEeecCCC-CCceeee-C
Q psy6259 110 --IQTRIQDMTNLVIGREERYKGPLQINNYG---LGGHYDLHCDATPRD----EGLWRLASFMFYLTDVE-LGGATIF-P 178 (227)
Q Consensus 110 --i~~ri~~~~g~~~~~~~~~~e~~~v~rY~---~G~~y~~H~D~~~~~----~~~~R~~T~liYLnd~~-~GGeT~F-p 178 (227)
|...+.+++|-++. .... + +.+. .|+...||.|...-. ....+.+++.|+|.|+. +.|.|.| |
T Consensus 111 p~l~~i~~~llG~~~~----l~~s-~-~~~k~p~~g~~~~wHqD~~~~~~~~g~P~~~~v~~wiaL~D~t~enG~l~viP 184 (310)
T 3emr_A 111 KRILDIVRHLLGSDVY----VHQS-R-INYKPGFKGKEFDWHSDFETWHVEDGMPRMRAISVSIALSDNYSFNGPLMLIP 184 (310)
T ss_dssp HHHHHHHHHHHTSCEE----EEEE-E-EECCCTTCCCCEEEECHHHHHHHHHCCCSSCEEEEEEESSCBCSSSCCCEECT
T ss_pred hHHHHHHHHHcCCceE----EEee-E-EEEcCCCCCCCCCcCCCCccccccCCCcccceEEEEEEecCCCCcCCCEEEEe
Confidence 33444456665432 1111 1 2333 256789999974211 01357899999999975 4566665 3
Q ss_pred CC------------------------------------------ceEEecccccEEEEEecCCCCCCCCccccccCCCcc
Q psy6259 179 SL------------------------------------------NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVAL 216 (227)
Q Consensus 179 ~~------------------------------------------~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~ 216 (227)
.. -+.+.-++|++|||.. +++|++.+-.+
T Consensus 185 GSH~~~~~~~g~~p~~~~~~~l~~~~~g~p~~~~~~~~~~~~~~~v~~~~~aGdvl~f~~---------~~~H~s~~N~S 255 (310)
T 3emr_A 185 GSHNYFVSCVGETPDNNYKESLKKQKLGVPDEESLRELTRIGGGISVPTGKAGSVTLFES---------NTMHGSTSNIT 255 (310)
T ss_dssp TGGGEEEECCC-----------------CCCHHHHHHHHHHHTSCBCCCBSTTCEEEEET---------TCCEEECCCCS
T ss_pred CCCCCcccccccccccccccccccccccCCCHHHHHHHHhccCceEEeeeCCceEEEEeC---------CceecCCCCCC
Confidence 21 1223447899999987 69999999877
Q ss_pred C-eEEEEE
Q psy6259 217 G-NKWGKL 223 (227)
Q Consensus 217 G-~K~i~~ 223 (227)
. .|+++.
T Consensus 256 ~~~R~~l~ 263 (310)
T 3emr_A 256 PYPRNNLF 263 (310)
T ss_dssp SCCCCEEE
T ss_pred CCCeEEEE
Confidence 5 555543
No 13
>3nnf_A CURA; non-HAEM Fe(II)/alpha-ketoglutarate-dependent enzymes, catal cryptic chlorination, biosynthetic protein; HET: AKG; 2.20A {Lyngbya majuscula} PDB: 3nnj_A 3nnl_A* 3nnm_A
Probab=97.56 E-value=4.9e-05 Score=64.61 Aligned_cols=142 Identities=10% Similarity=-0.047 Sum_probs=73.6
Q ss_pred ccceeeCceEEEEec-------cCCcEEEEccCCCHHHHHHHHHHccCCeeecEEeecCC----ceeeeeeeeEEEEeCC
Q psy6259 30 NTFLKIGPLKVEELY-------LDPRVVKIHDAIYDSEINRIIELSKGKVERGKVVNYGD----TIYVDTRLSKVYFLYP 98 (227)
Q Consensus 30 ~~~l~~~P~k~e~ls-------~~p~I~~~~~fls~~Ec~~li~~~~~~~~~s~~~~~~~----~~~~~~R~s~~~~l~~ 98 (227)
+-++..+|+--+++. .+.| +++.+++|++|++.|++..+.-.+++.+..... ......|+..-.. ..
T Consensus 17 ~~~~~~~~l~~~qve~~~~~fE~eGY-Lvlk~vFs~eEv~~l~~el~~~~~d~~~~k~~~~i~~~~s~~lrs~~H~~-~~ 94 (344)
T 3nnf_A 17 NLYFQSNAMNREQVEQLKQEYEEKGY-CQIKKIFDFSAIKTIQKTLDQAKQESQISKEKVTLKLGGIDDIDTNDHAY-DL 94 (344)
T ss_dssp --------CCSHHHHHHHHHHHHHSE-EEETTCSCHHHHHHHHHHHHHHHHHCCCCSHHHHHHTTSCCCCBCSEEEE-CS
T ss_pred ceeeccCcCCHHHHHHHHhhhccCce-EEEcCCCCHHHHHHHHHHHHHHhhchhhhcccceecCCCccchhcccccc-hh
Confidence 445555665544443 3667 599999999999999988864333322221110 0112344322111 11
Q ss_pred CC-CCCcHHHHHHHHHHHhccCCCcccccccCCceEEEEeCCCC-cceeeeeCCCCC--CCCceEEEEEEeecCCC--CC
Q psy6259 99 EI-FGDHPFLYKIQTRIQDMTNLVIGREERYKGPLQINNYGLGG-HYDLHCDATPRD--EGLWRLASFMFYLTDVE--LG 172 (227)
Q Consensus 99 ~~-~~~~~~~~~i~~ri~~~~g~~~~~~~~~~e~~~v~rY~~G~-~y~~H~D~~~~~--~~~~R~~T~liYLnd~~--~G 172 (227)
-. .....+.+++...+..++|-+. ..-.-+...+++|+ -|.||.|...-. ...+|-+|+-|=|.+.. ++
T Consensus 95 f~~h~~s~l~~rll~vl~~LlG~el-----~i~qs~~fe~kPG~KGFpWH~D~~~F~~~~~eD~a~S~WIpLd~i~~e~n 169 (344)
T 3nnf_A 95 VKYDFVSSFIQEKLALLNYITGKNL-----MIMHNALFSVEPNHKGLPWHVGVGSFSFTKTEDFGASIWIPLDKITKEHR 169 (344)
T ss_dssp SCHHHHHHHHGGGHHHHHHHHTSCE-----EEEEEEEEEECBTCCBSCSBCTTTTTTTBCTTSCEEEEEEESSCBCTTTB
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCce-----eeeecceEeeCCCCCCCCceecccccccccCCCCeEEEEEECCCCCccCC
Confidence 00 0011233444444455666654 23334556788876 599999954222 23568999999999865 34
Q ss_pred ceee-eC
Q psy6259 173 GATI-FP 178 (227)
Q Consensus 173 GeT~-Fp 178 (227)
|... -|
T Consensus 170 GGM~~VP 176 (344)
T 3nnf_A 170 GGMQYVS 176 (344)
T ss_dssp CSEEEEC
T ss_pred CceEEec
Confidence 5444 46
No 14
>3gja_A CYTC3; halogenase, beta barrel, biosynthetic protein; 2.20A {Streptomyces} PDB: 3gjb_A*
Probab=97.38 E-value=7.9e-05 Score=64.30 Aligned_cols=159 Identities=13% Similarity=0.052 Sum_probs=86.8
Q ss_pred eccCCcEEEEccCCCHHHHHHHHHHccCCeee--cEEeecCCceeeeeeeeEEEEeCCCCCCCcHHHHH------HHHHH
Q psy6259 43 LYLDPRVVKIHDAIYDSEINRIIELSKGKVER--GKVVNYGDTIYVDTRLSKVYFLYPEIFGDHPFLYK------IQTRI 114 (227)
Q Consensus 43 ls~~p~I~~~~~fls~~Ec~~li~~~~~~~~~--s~~~~~~~~~~~~~R~s~~~~l~~~~~~~~~~~~~------i~~ri 114 (227)
+..+.+ ++++++|+++|++++.+.++..+.. ..+.....+ ...|... ++. ..++.+.. |...+
T Consensus 20 f~~~Gy-v~i~~~l~~~~v~~l~~~i~~~l~~~~~~~~~~~~g--~~~~~~~--~~~----~~~~~f~~l~~~p~l~~~~ 90 (319)
T 3gja_A 20 FERDGY-IGPVKIFEPEEMTRRWNIIRRQLLDRSLAIYPDSNG--KANISNY--DRH----LDIDLLAEHIMRPEIVDRV 90 (319)
T ss_dssp HHHHSE-EEEEESSCHHHHHHHHHHHHHHHHCCTTCSSCSCSS--HHHHTTT--TGG----GTCHHHHHHHHCHHHHHHH
T ss_pred HHHCCE-EECcCCCCHHHHHHHHHHHHHHhhcCccccccCCCc--cchhhhh--hhc----ccCHHHHHHHcChHHHHHH
Confidence 445666 5899999999999998777543221 111111011 0111110 111 11233332 44455
Q ss_pred HhccCCCcccccccCCceEEEEeCCCCcceeeeeCCCCCCC---------C------ceEEEEEEeecCCC-CCceeee-
Q psy6259 115 QDMTNLVIGREERYKGPLQINNYGLGGHYDLHCDATPRDEG---------L------WRLASFMFYLTDVE-LGGATIF- 177 (227)
Q Consensus 115 ~~~~g~~~~~~~~~~e~~~v~rY~~G~~y~~H~D~~~~~~~---------~------~R~~T~liYLnd~~-~GGeT~F- 177 (227)
.+++|-++. .....-+.+..-++...||.|...-... . .+.+++.|+|.|+. +.|.|.|
T Consensus 91 ~~llG~~~~----~~~s~~~~k~Pg~~~~~wHqD~~y~~~~g~p~~~~P~~~~~p~~~~~v~~wiaL~d~t~enG~l~vv 166 (319)
T 3gja_A 91 GSLIGRNLL----CWRSEFFPKYQGDEGTDWHQAATFAHATGKPQIIWPSDEGRPAFIGTITVWTAFTHSTEQNGCLQLM 166 (319)
T ss_dssp HHHHCSSEE----EEEEEEEEECTTCCCEEEEEECCBCTTTCCBSEECCCCSSSCEECCCEEEEEESSCBCTTTTCEEEC
T ss_pred HHHcCCceE----EeeeeEeecCCCCCCCCcccCCcccccCCCccccCccccccccccceEEEEEEeccCCCcCcCEEEE
Confidence 566775432 2222223333322337999997532111 1 13599999999975 4566654
Q ss_pred CCC---------------------------------------------------ceEEecccccEEEEEecCCCCCCCCc
Q psy6259 178 PSL---------------------------------------------------NLTVFPEKGSAVFWYNAHANTLLDYR 206 (227)
Q Consensus 178 p~~---------------------------------------------------~~~v~P~~G~al~f~~~~~~g~~d~~ 206 (227)
|.. .+.+.-++|++|||.. +
T Consensus 167 PGSH~~~~~~~~~~~~~~~~~~~~~~~~g~~~~f~~~d~~~l~~~~~~~~~~~~~v~~~~~aGd~v~f~~---------~ 237 (319)
T 3gja_A 167 PGTHTSMNYDESKGMDYDADAINQREKDGIKRGFFGYDYRSLQKDPDWKPDESQAYPMVLKPGEAVIFWS---------N 237 (319)
T ss_dssp SCC---CEECCC------------------------------------------CCBCCBCTTEEEEEET---------T
T ss_pred eCCccCcccCcccccccCchhhhhhccccccccccccchhhhccccccccccCceeEeeECCCeEEEEcC---------C
Confidence 221 0123456899999987 6
Q ss_pred cccccCCCc--cC-eEEEEE
Q psy6259 207 MYHSGCPVA--LG-NKWGKL 223 (227)
Q Consensus 207 ~~H~g~pV~--~G-~K~i~~ 223 (227)
++|++.|-. ++ .|++++
T Consensus 238 ~~H~s~~N~~ts~~~R~a~~ 257 (319)
T 3gja_A 238 TMHASLPHTGSKTDYRMGFA 257 (319)
T ss_dssp SCEEECCCCSCTTCCEEEEE
T ss_pred ccccCCCCCCCCCCcEEEEE
Confidence 999999998 54 666554
No 15
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=96.85 E-value=0.0022 Score=53.93 Aligned_cols=75 Identities=17% Similarity=0.169 Sum_probs=53.7
Q ss_pred CCcceeeeeCCCCCCCCc-eEEEEEEeecCCC-CCceeee-CCC---------------------------------ceE
Q psy6259 140 GGHYDLHCDATPRDEGLW-RLASFMFYLTDVE-LGGATIF-PSL---------------------------------NLT 183 (227)
Q Consensus 140 G~~y~~H~D~~~~~~~~~-R~~T~liYLnd~~-~GGeT~F-p~~---------------------------------~~~ 183 (227)
|+...||.|...-..... +.+|+.|+|.|+. ++|.|.| |.. .+.
T Consensus 150 ~~~~~wHqD~~~~~~~p~~~~~~~wi~L~d~~~~nG~l~~vPGSH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 229 (291)
T 2opw_A 150 GGEVSPHQDASFLYTEPLGRVLGVWIAVEDATLENGCLWFIPGSHTSGVSRRMVRAPVGSAPGTSFLGSEPARDNSLFVP 229 (291)
T ss_dssp BCCEEEECGGGTSCEESSSCEEEEEEESSCBCTTTTCEEEETTCSSSCCSEEEEECC----CCEEEEECCCCCCGGGCEE
T ss_pred CCCcCCeeCCcccccCCCCceEEEEEEcccCCCCCCCEEEECCccCCCcccccccCCCCCCCcceeeccccCCCcCCeee
Confidence 455899999864322233 7899999999975 5666754 211 244
Q ss_pred EecccccEEEEEecCCCCCCCCccccccCCCccC-eEEEEE
Q psy6259 184 VFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALG-NKWGKL 223 (227)
Q Consensus 184 v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G-~K~i~~ 223 (227)
+.-++|++|||.. +++|++.|..+. .|++++
T Consensus 230 ~~~~aGd~~~f~~---------~~~H~s~~N~s~~~R~~~~ 261 (291)
T 2opw_A 230 TPVQRGALVLIHG---------EVVHKSKQNLSDRSRQAYT 261 (291)
T ss_dssp ECBCTTCEEEEET---------TCEEEECCBCSSSCCCEEE
T ss_pred cccCCCcEEEEcC---------CceecCCCCCCCCceEEEE
Confidence 6779999999987 699999998875 555544
No 16
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=96.75 E-value=0.012 Score=51.29 Aligned_cols=134 Identities=12% Similarity=0.101 Sum_probs=72.8
Q ss_pred eccCCcEEEEccCCCHHHHHHHHHHccCCeeecEEeecC--Cc-----eeeeeeeeEE------EEeCCCCCCCcHHHHH
Q psy6259 43 LYLDPRVVKIHDAIYDSEINRIIELSKGKVERGKVVNYG--DT-----IYVDTRLSKV------YFLYPEIFGDHPFLYK 109 (227)
Q Consensus 43 ls~~p~I~~~~~fls~~Ec~~li~~~~~~~~~s~~~~~~--~~-----~~~~~R~s~~------~~l~~~~~~~~~~~~~ 109 (227)
...-|.|.++++|||++|.+.|++...-...+....+.. .+ --..++-+.. .| +. .-.+.+..
T Consensus 107 ~~lp~Gl~~~p~fis~~Ee~~Ll~~i~w~~~~~~~~~~~~l~~Rr~~~yG~~Y~Ys~~~~~~~~p~-p~---~~P~~L~~ 182 (345)
T 3tht_A 107 QALPPGLMVVEEIISSEEEKMLLESVDWTEDTDNQNSQKSLKHRRVKHFGYEFHYENNNVDKDKPL-SG---GLPDICES 182 (345)
T ss_dssp CSCCTTEEEETTCSCHHHHHHHHTTCC----------------CEEECCC----------------------CCCHHHHH
T ss_pred ccCCCceEEEcCcCCHHHHHHHHHhcccCCccccccCcccccCceEEEECCcccccccccccCCCC-Cc---CcCHHHHH
Confidence 445677999999999999999987764211111111000 00 0011111111 11 11 12345677
Q ss_pred HHHHHHh--ccCCCcccccccCCceEEEEeCCCCcceeeeeCCCCCCCCceEEEEEEeecCCCCCceeeeC-----CCce
Q psy6259 110 IQTRIQD--MTNLVIGREERYKGPLQINNYGLGGHYDLHCDATPRDEGLWRLASFMFYLTDVELGGATIFP-----SLNL 182 (227)
Q Consensus 110 i~~ri~~--~~g~~~~~~~~~~e~~~v~rY~~G~~y~~H~D~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp-----~~~~ 182 (227)
|.+|+.+ +.+. ......+..|.+|+.-.||.|..... +..++|+.+ |+..+|- ...+
T Consensus 183 l~~r~~~~~~~~~-------~~n~~lvN~Y~~G~~I~~H~D~~~~~--~~~I~slSL-------G~~~~f~f~~~~~~~~ 246 (345)
T 3tht_A 183 FLEKWLRKGYIKH-------KPDQMTINQYEPGQGIPAHIDTHSAF--EDEIVSLSL-------GSEIVMDFKHPDGIAV 246 (345)
T ss_dssp HHHHHHHHTSCSS-------CCSEEEEEEECTTCCEEEECCCTTTB--CSCEEEEEE-------SSCEEEEEECTTSCEE
T ss_pred HHHHHHhcccCCC-------CCCEEEEEEecCCCCEeeccCCchhc--CCeEEEEEC-------CCceeEEEccCCCceE
Confidence 7788754 3333 33457888899999999999996542 345555542 3333321 1146
Q ss_pred EEecccccEEEEEe
Q psy6259 183 TVFPEKGSAVFWYN 196 (227)
Q Consensus 183 ~v~P~~G~al~f~~ 196 (227)
+|.-..|+++++.-
T Consensus 247 ~l~L~~gsLlvM~G 260 (345)
T 3tht_A 247 PVMLPRRSLLVMTG 260 (345)
T ss_dssp EEEECTTEEEEECT
T ss_pred EEEcCCCcEEEECh
Confidence 78888999999864
No 17
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=95.30 E-value=0.16 Score=40.98 Aligned_cols=101 Identities=20% Similarity=0.234 Sum_probs=66.8
Q ss_pred HHHHHHHHHHhccCCCcccccccCCceEEEEeCCCCcceeeeeCCCCCCCCceEEEEEEeecCCCCCceeeeC-------
Q psy6259 106 FLYKIQTRIQDMTNLVIGREERYKGPLQINNYGLGGHYDLHCDATPRDEGLWRLASFMFYLTDVELGGATIFP------- 178 (227)
Q Consensus 106 ~~~~i~~ri~~~~g~~~~~~~~~~e~~~v~rY~~G~~y~~H~D~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp------- 178 (227)
.+..+.+++.+.+|+..- ..+...+..|.+|+.-.+|.|..... -+..++|+.+ |++..|-
T Consensus 85 ~L~~l~~~~~~~~g~~~~----~pn~~LvN~Y~~G~~i~~H~D~~e~~-~~~pI~svSL-------G~~~~f~f~~~~~~ 152 (211)
T 3i3q_A 85 SFHNLCQRAATAAGYPDF----QPDACLINRYAPGAKLSLHQDKDEPD-LRAPIVSVSL-------GLPAIFQFGGLKRN 152 (211)
T ss_dssp HHHHHHHHHHHHTTCTTC----CCCEEEEEEECTTCCEEEECCCCCSC-TTSCEEEEEE-------ESCEEEEECCSSTT
T ss_pred HHHHHHHHHHHhcCCCCc----CCCEEEEEEEcCCCCcccccCCCccc-cCCCEEEEEC-------CCCeEEEEecccCC
Confidence 678888888887776321 23557888899999999999953211 1344666553 3333331
Q ss_pred CCceEEecccccEEEEEecCCCCCCCCccccccCCCcc-------CeEEEEEe
Q psy6259 179 SLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVAL-------GNKWGKLL 224 (227)
Q Consensus 179 ~~~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~-------G~K~i~~~ 224 (227)
....+|.-+.|+++++.... . ...|++.++.. +.|+.+|.
T Consensus 153 ~~~~~i~L~~GsllvM~G~~-----r-~~~H~I~~~~~~~~p~~~~~RIsLTF 199 (211)
T 3i3q_A 153 DPLKRLLLEHGDVVVWGGES-----R-LFYHGIQPLKAGFHPLTIDCRYNLTF 199 (211)
T ss_dssp SCCEEEEECTTCEEEECGGG-----T-TCCEEECCCCCCCBTTTBTCEEEEEE
T ss_pred CceEEEECCCCCEEEECchH-----H-ceEeccCcccCCcCCCCCCCEEEEEe
Confidence 12467999999999996432 2 35799888876 45777764
No 18
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=81.75 E-value=8.2 Score=32.49 Aligned_cols=85 Identities=6% Similarity=-0.046 Sum_probs=51.4
Q ss_pred CCceEEEEeCC-------C--C-cceeeeeCCCCCCCCceEEEEEEeecCCCCCc---eeeeCCC-ceEEecccccEEEE
Q psy6259 129 KGPLQINNYGL-------G--G-HYDLHCDATPRDEGLWRLASFMFYLTDVELGG---ATIFPSL-NLTVFPEKGSAVFW 194 (227)
Q Consensus 129 ~e~~~v~rY~~-------G--~-~y~~H~D~~~~~~~~~R~~T~liYLnd~~~GG---eT~Fp~~-~~~v~P~~G~al~f 194 (227)
...+++.+|.+ | + ...+|.|... +|+|+. |...|| -=+.... =+.|+|..|.+||-
T Consensus 156 ~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~--------lTlL~q--d~~v~G~~~LqV~~~g~W~~V~p~pg~lvVN 225 (311)
T 1dcs_A 156 EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSM--------VTLIQQ--TPCANGFVSLQAEVGGAFTDLPYRPDAVLVF 225 (311)
T ss_dssp CCEEEEEEECC-----------CCEEEEEECSS--------EEEEEE--ECCTTCCCCEEEEETTEEEECCCCTTCEEEE
T ss_pred chhhheecCCCCCcccccCccccccccccCCCe--------EEEEec--CCCCCCceeEEEEeCCEEEeCcCCCCeEEEE
Confidence 45678999974 2 1 2789999753 677754 423455 2233322 26899999998883
Q ss_pred Ee----cCCCCCCCCccccccCCCc-----cCeEEEEEe
Q psy6259 195 YN----AHANTLLDYRMYHSGCPVA-----LGNKWGKLL 224 (227)
Q Consensus 195 ~~----~~~~g~~d~~~~H~g~pV~-----~G~K~i~~~ 224 (227)
-- .+.+|.. ..+.|++.... ...||.+..
T Consensus 226 iGD~l~~~TnG~~-kS~~HRVv~~~~~~~~~~~R~Si~~ 263 (311)
T 1dcs_A 226 CGAIATLVTGGQV-KAPRHHVAAPRRDQIAGSSRTSSVF 263 (311)
T ss_dssp ECHHHHHHTTSCS-CCCCEEECCC----CTTCCEEEEEE
T ss_pred HHHHHHHHhCCcc-cCCCceEeCCCcccCCCCCeEEEEE
Confidence 21 1223433 36899997654 457887654
No 19
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=79.20 E-value=7.5 Score=32.90 Aligned_cols=83 Identities=17% Similarity=0.137 Sum_probs=52.9
Q ss_pred ceEEEEeCCC------CcceeeeeCCCCCCCCceEEEEEEeecCCCCCceeeeCCC-ceEEecccccEEEEEe----cCC
Q psy6259 131 PLQINNYGLG------GHYDLHCDATPRDEGLWRLASFMFYLTDVELGGATIFPSL-NLTVFPEKGSAVFWYN----AHA 199 (227)
Q Consensus 131 ~~~v~rY~~G------~~y~~H~D~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~-~~~v~P~~G~al~f~~----~~~ 199 (227)
.+++.+|.+. ....+|.|... +|+| +.|...||-=+..+. =+.|+|..|..||--- .+.
T Consensus 156 ~lrl~~YPp~~~~~~~~g~~~HtD~g~--------lTlL--~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~S 225 (319)
T 1w9y_A 156 GTKVSNYPPCPKPDLIKGLRAHTDAGG--------IILL--FQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVIT 225 (319)
T ss_dssp EEEEEECCCCSCGGGGSSCCCBCCSSS--------EEEE--EESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHT
T ss_pred eeEEEecCCCcccccccccccccCCCc--------eEEE--EecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHh
Confidence 4788899753 23678888643 6777 455445665555432 2689999999888321 112
Q ss_pred CCCCCCccccccCCCccCeEEEEEe
Q psy6259 200 NTLLDYRMYHSGCPVALGNKWGKLL 224 (227)
Q Consensus 200 ~g~~d~~~~H~g~pV~~G~K~i~~~ 224 (227)
+|.. ..+.|++.....+.||.+..
T Consensus 226 nG~~-kS~~HRVv~~~~~~R~Sia~ 249 (319)
T 1w9y_A 226 NGKY-KSVMHRVIAQKDGARMSLAS 249 (319)
T ss_dssp TTSS-CCCCEEECCCSSSCCEEEEE
T ss_pred CCee-ecccceecCCCCCCceEEEE
Confidence 3332 36899998766678887653
No 20
>3pl0_A Uncharacterized protein; quorum sensing, biofilm formation, double-stranded beta-HELI structural genomics; HET: MSE; 1.91A {Methylibium petroleiphilum}
Probab=74.08 E-value=6.9 Score=32.23 Aligned_cols=51 Identities=16% Similarity=0.139 Sum_probs=31.1
Q ss_pred ceEEEEEEeecCCCCCceeee-CCCc---eEEe-cccccEEEEEecCCCCCCCCccccccCCCcc
Q psy6259 157 WRLASFMFYLTDVELGGATIF-PSLN---LTVF-PEKGSAVFWYNAHANTLLDYRMYHSGCPVAL 216 (227)
Q Consensus 157 ~R~~T~liYLnd~~~GGeT~F-p~~~---~~v~-P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~ 216 (227)
.-+++++|--+.+ +||+|.. ...+ ..+. -+.|+++++. |.+.+|.+.||..
T Consensus 171 d~v~v~lv~R~Ni-~GGet~I~~~~~~~~~~~~l~~p~d~llv~--------D~~~~H~vTpI~~ 226 (254)
T 3pl0_A 171 DFVAVVFIGRQGV-RGGETRVFDAAGPQGVRFTLEQPWTVLLLD--------DQQVIHESTPLLP 226 (254)
T ss_dssp SEEEEEEEEEESE-EECCEEEEETTSSEEEEECCCSTTCEEEEE--------TTTEEEEECCEEE
T ss_pred CEEEEEEecCCcc-ccceEEEEcCCCCccceeEecCCCcEEEEe--------CCcccCCCCcccc
Confidence 3455555555544 4999874 3321 1222 2667776665 5689999999875
No 21
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=71.38 E-value=28 Score=29.74 Aligned_cols=83 Identities=17% Similarity=0.129 Sum_probs=52.3
Q ss_pred CceEEEEeCCC------CcceeeeeCCCCCCCCceEEEEEEeecCCCCCceeeeCCC-ceEEecccccEEEEEe----cC
Q psy6259 130 GPLQINNYGLG------GHYDLHCDATPRDEGLWRLASFMFYLTDVELGGATIFPSL-NLTVFPEKGSAVFWYN----AH 198 (227)
Q Consensus 130 e~~~v~rY~~G------~~y~~H~D~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~-~~~v~P~~G~al~f~~----~~ 198 (227)
..+++.+|.+. -...+|.|... +|+|+. |. .||-=++... =+.|+|..|.+||--- .+
T Consensus 210 ~~lrl~~YPp~~~~~~~~g~~~HtD~g~--------lTlL~q--d~-v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~ 278 (356)
T 1gp6_A 210 LQMKINYYPKCPQPELALGVEAHTDVSA--------LTFILH--NM-VPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEIL 278 (356)
T ss_dssp EEEEEEEECCCSSTTTCCSEEEECCCSS--------EEEEEE--CS-CCCEEEEETTEEEECCCCTTCEEEEECHHHHHH
T ss_pred ceeeeeecCCCCCcccccCcCCccCCCe--------EEEEEE--cC-CCCeEEecCCcEEECcCCCCeEEEEeccHHHHh
Confidence 35788899752 23678998743 677744 43 4665455432 2689999999888432 12
Q ss_pred CCCCCCCccccccCCCccCeEEEEEe
Q psy6259 199 ANTLLDYRMYHSGCPVALGNKWGKLL 224 (227)
Q Consensus 199 ~~g~~d~~~~H~g~pV~~G~K~i~~~ 224 (227)
.+|.. ..+.|++..-....||.+..
T Consensus 279 TnG~~-kS~~HRVv~~~~~~R~Sia~ 303 (356)
T 1gp6_A 279 SNGKY-KSILHRGLVNKEKVRISWAV 303 (356)
T ss_dssp TTTSS-CCCCEEECCCSSCCEEEEEE
T ss_pred cCCEe-eccCceecCCCCCCEEEEEE
Confidence 23332 36899998655568887653
No 22
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=67.44 E-value=4.9 Score=32.80 Aligned_cols=38 Identities=16% Similarity=-0.039 Sum_probs=32.4
Q ss_pred ceEEecccccEEEEEecCCCCCCCCccccccCCCcc--CeEEEEEecC
Q psy6259 181 NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVAL--GNKWGKLLLS 226 (227)
Q Consensus 181 ~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~--G~K~i~~~W~ 226 (227)
.+.++=++|++|||.|. +++|+..+-.. +.|+..+.|+
T Consensus 231 ~~~~~w~~GD~~i~DN~--------~vlH~R~~f~~~~~~R~l~R~~i 270 (273)
T 1nx8_A 231 YYKHFWEDGDLLIMDNR--------RVIHEREEFNDDDIVRRLYRGQT 270 (273)
T ss_dssp EEEECCCTTCEEEEETT--------TEEEEECCCCCTTCEEEEEEEEE
T ss_pred EEEeEecCCCEEEEECC--------eeeeccccCCCCCCCeEEEEeec
Confidence 57889999999999996 79999999864 4788888875
No 23
>3dqy_A Toluene 1,2-dioxygenase system ferredoxin subunit; rieske, iron-sulfur cluster, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport; 1.20A {Pseudomonas putida} SCOP: b.33.1.0 PDB: 4emj_B*
Probab=66.55 E-value=11 Score=25.99 Aligned_cols=49 Identities=12% Similarity=0.158 Sum_probs=35.2
Q ss_pred EEEEeecCCCCCceeeeCC--CceEEecccccEEEEEecCCCCCCCCccccccCCCccCe
Q psy6259 161 SFMFYLTDVELGGATIFPS--LNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGN 218 (227)
Q Consensus 161 T~liYLnd~~~GGeT~Fp~--~~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G~ 218 (227)
..+.-++|..+|+...|.. ..+.|.-..|.+..|.| ...|.++|+..|.
T Consensus 3 ~~v~~~~~l~~g~~~~~~~~g~~i~v~r~~g~~~A~~~---------~CpH~g~~L~~g~ 53 (106)
T 3dqy_A 3 TYILRQGDLPPGEMQRYEGGPEPVMVCNVDGEFFAVQD---------TCTHGDWALSDGY 53 (106)
T ss_dssp EEEEEGGGSCTTCEEEECCSSSCEEEEEETTEEEEEES---------BCSSSSCBGGGSE
T ss_pred EEEEEHHHCCCCCEEEEEECCEEEEEEEECCEEEEEeC---------cCCCCCCCCcCcE
Confidence 3455677877777666653 34555557888888888 6999999998763
No 24
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=58.85 E-value=7 Score=33.38 Aligned_cols=38 Identities=21% Similarity=0.319 Sum_probs=31.7
Q ss_pred ceEEecccccEEEEEecCCCCCCCCccccccCCCc---cC-eEEEEEecC
Q psy6259 181 NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVA---LG-NKWGKLLLS 226 (227)
Q Consensus 181 ~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~---~G-~K~i~~~W~ 226 (227)
.+.++=++|+++||.|. +++|+-.+-. .| .|+....|+
T Consensus 296 ~~~~~w~pGDv~i~DNr--------~vlH~R~~f~~~~~~~~R~L~R~~i 337 (358)
T 2wbq_A 296 LYELVLDQGDVAFIDNR--------RAVHGRRAFQPRYDGRDRWLKRINI 337 (358)
T ss_dssp CEEEECCTTCEEEEETT--------TEEEEECCCCCCCSSCCCEEEEEEE
T ss_pred ceEEeecCCCEEEEeCc--------ccccCCCCCCCCCCCCCceEEEEEE
Confidence 57899999999999996 7999988865 24 788888875
No 25
>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A*
Probab=58.82 E-value=6.4 Score=33.73 Aligned_cols=38 Identities=13% Similarity=0.084 Sum_probs=31.8
Q ss_pred ceEEecccccEEEEEecCCCCCCCCccccccCCCcc----CeEEEEEecC
Q psy6259 181 NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVAL----GNKWGKLLLS 226 (227)
Q Consensus 181 ~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~----G~K~i~~~W~ 226 (227)
.+.++=++|+++||.|. +++|+-.+... +.|+....|+
T Consensus 291 ~~~~~w~pGDivi~DN~--------~vlH~R~~f~d~~~~~~R~L~R~~i 332 (357)
T 2og5_A 291 AVTHRLLPGELAIVDNR--------VTVHGRTEFTPRYDGTDRWLQRTFV 332 (357)
T ss_dssp CEEECCCTTCEEEEETT--------TEEEEECCCCCCCSSCSCEEEEEEE
T ss_pred eEEEeeCCCCEEEEeCC--------ccccCCCCCCCCCCCCCcEEEEEEE
Confidence 47889999999999996 79999888753 4789888885
No 26
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=56.32 E-value=8.8 Score=33.38 Aligned_cols=38 Identities=13% Similarity=0.109 Sum_probs=32.3
Q ss_pred ceEEecccccEEEEEecCCCCCCCCccccccCCCcc--C-eEEEEEecC
Q psy6259 181 NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVAL--G-NKWGKLLLS 226 (227)
Q Consensus 181 ~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~--G-~K~i~~~W~ 226 (227)
.+.++=++|+++||.|. +++|+..+-.. | .|+....|+
T Consensus 328 ~~~~~~~pGd~vi~DNr--------~~lH~R~~f~~~~~~~R~L~r~yi 368 (388)
T 3o2g_A 328 KFTFKMNPGDVITFDNW--------RLLHGRRSYEAGTEISRHLEGAYA 368 (388)
T ss_dssp CEEECCCTTCEEEEETT--------TEEEEECCCCCCSSCSCEEEEEEE
T ss_pred EEEEEcCCCcEEEEeCc--------EEeeCCCCcCCCCCCCEEEEEEEE
Confidence 48899999999999996 79999988774 4 788888875
No 27
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=56.04 E-value=8.2 Score=31.66 Aligned_cols=38 Identities=11% Similarity=-0.025 Sum_probs=31.2
Q ss_pred ceEEecccccEEEEEecCCCCCCCCccccccCCCcc-CeEEEEEecC
Q psy6259 181 NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVAL-GNKWGKLLLS 226 (227)
Q Consensus 181 ~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~-G~K~i~~~W~ 226 (227)
.+.++=++|+++||.|. +++|+..+-.. +.|+....|+
T Consensus 235 ~~~~~w~~GDv~i~DN~--------~~lH~r~~f~~~~~R~l~R~~i 273 (283)
T 1otj_A 235 QVRWRWQPNDIAIWDNR--------VTQHYANADYLPQRRIMHRATI 273 (283)
T ss_dssp EEEECCCTTCEEEEETT--------SEEEEECCCCTTSCEEEEEEEE
T ss_pred EEEeeEcCCCEEEEECc--------ceeecccCCCCCCceEEEEEEE
Confidence 47788899999999996 79999998764 5787777764
No 28
>2qpz_A Naphthalene 1,2-dioxygenase system ferredoxin subunit; rieske ferredoxin, 2Fe-2S, aromatic hydrocarbons catabolism, electron transport, iron; 1.85A {Pseudomonas putida}
Probab=55.61 E-value=22 Score=24.22 Aligned_cols=49 Identities=16% Similarity=-0.010 Sum_probs=32.8
Q ss_pred EEEEEeecCCCCCceeeeCCC--ceE-EecccccEEEEEecCCCCCCCCccccccCCCccCe
Q psy6259 160 ASFMFYLTDVELGGATIFPSL--NLT-VFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGN 218 (227)
Q Consensus 160 ~T~liYLnd~~~GGeT~Fp~~--~~~-v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G~ 218 (227)
+..+.-++|..+|+...|... .+. ++ ..|....|.| ...|.++|+..|.
T Consensus 4 w~~v~~~~~l~~g~~~~~~~~g~~i~v~r-~~g~~~A~~~---------~CpH~g~~L~~g~ 55 (103)
T 2qpz_A 4 WIEAVALSDILEGDVLGVTVEGKELALYE-VEGEIYATDN---------LCTHGSARMSDGY 55 (103)
T ss_dssp EEEEEETTSCCTTCEEEEEETTEEEEEEE-ETTEEEEEES---------BCSSSSCBGGGSE
T ss_pred cEEEEEHHHcCCCCEEEEEECCEEEEEEE-ECCEEEEECC---------cCCCCCCCCCCCe
Confidence 344556777777665555322 333 45 7888888887 6999999988764
No 29
>1vm9_A Toluene-4-monooxygenase system protein C; structural genomics, CESG, protein structure initiative, PSI, ferredoxin, FES, [2Fe-2S] cluster; 1.48A {Pseudomonas mendocina} SCOP: b.33.1.1 PDB: 2q3w_A 1sjg_A
Probab=53.98 E-value=23 Score=24.56 Aligned_cols=48 Identities=17% Similarity=0.156 Sum_probs=32.9
Q ss_pred EEEeecCCCCCceeeeCC-C--ceE-EecccccEEEEEecCCCCCCCCccccccCCCccCe
Q psy6259 162 FMFYLTDVELGGATIFPS-L--NLT-VFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGN 218 (227)
Q Consensus 162 ~liYLnd~~~GGeT~Fp~-~--~~~-v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G~ 218 (227)
.+.-++|..+|+...|.. . .+. ++-..|.+..|.| ...|.|+|+..|.
T Consensus 4 ~v~~~~~l~~g~~~~~~~~~g~~v~v~r~~~g~~~A~~~---------~CpH~g~~L~~g~ 55 (111)
T 1vm9_A 4 KICSLDDIWVGEMETFETSDGTEVLIVNSEEHGVKAYQA---------MCPHQEILLSEGS 55 (111)
T ss_dssp EEEEGGGSCTTCEEEEECTTCCEEEEEEETTTEEEEEES---------BCSSSSCBGGGSE
T ss_pred EEEEHHHCCCCCeEEEEEcCCCEEEEEEeCCCeEEEEeC---------cCCCCCcCCCCce
Confidence 455677777776555543 2 333 4555888888888 6999999998763
No 30
>4aiv_A Probable nitrite reductase [NAD(P)H] small subuni; oxidoreductase, nitrite metabolism; 2.00A {Mycobacterium tuberculosis}
Probab=53.71 E-value=33 Score=24.37 Aligned_cols=52 Identities=13% Similarity=-0.064 Sum_probs=36.3
Q ss_pred ceEEEEEEeecCCCCCceeeeCC---CceE-EecccccEEEEEecCCCCCCCCccccccCCCccC
Q psy6259 157 WRLASFMFYLTDVELGGATIFPS---LNLT-VFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALG 217 (227)
Q Consensus 157 ~R~~T~liYLnd~~~GGeT~Fp~---~~~~-v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G 217 (227)
.+.+.-+.-++|...|+...+.. ..+. ++...|.+-.+.| ...|.+.|+.+|
T Consensus 7 ~~~W~~Vc~~~dL~~g~~~~~~~~~G~~v~l~r~~dG~v~A~~n---------~CpH~ga~L~~~ 62 (119)
T 4aiv_A 7 IQVWTTACAYDHLIPGRGVGVLLDDGSQVALFRLDDGSVHAVGN---------VDPFSGAAVMSR 62 (119)
T ss_dssp EEEEEEEEEGGGSCTTCCEEEECTTSCEEEEEECTTSCEEEEES---------BCTTTCCBCGGG
T ss_pred ccceeEeeEHHHcCCCCceEEEEcCCcEEEEEEcCCCeEEEEEC---------CCCCCCCccccC
Confidence 45688888999988775444322 2344 4556777777777 699999998775
No 31
>2i7f_A Ferredoxin component of dioxygenase; rieske ferredoxin, oxidoreductase; HET: CIT; 1.90A {Sphingobium yanoikuyae}
Probab=52.43 E-value=34 Score=23.50 Aligned_cols=49 Identities=16% Similarity=0.119 Sum_probs=33.9
Q ss_pred EEEEEeecCCCCCceeeeCCC--c-eEEecccccEEEEEecCCCCCCCCccccccCCCccC
Q psy6259 160 ASFMFYLTDVELGGATIFPSL--N-LTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALG 217 (227)
Q Consensus 160 ~T~liYLnd~~~GGeT~Fp~~--~-~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G 217 (227)
+..+.-++|..+|+...|... . +.|.-..|.+..|.| ...|.++|+..|
T Consensus 4 w~~v~~~~~l~~g~~~~~~~~g~~~v~v~r~~g~~~A~~~---------~CpH~g~~L~~g 55 (108)
T 2i7f_A 4 KLRLCQVASVKDGEPVAVYQEKMPALAVYNVDGEVFVTDN---------LCTHGNAMLTDG 55 (108)
T ss_dssp EEEEEEGGGCBTTBCEEECCTTSSCEEEEEETTEEEEEES---------BCSSSSCBGGGS
T ss_pred cEEEEEHhHcCCCCeEEEEECCeeEEEEEEECCEEEEEeC---------cCCCCCCCCCCC
Confidence 455667788877776666432 3 443333788888877 699999999876
No 32
>1ds1_A Clavaminate synthase 1; oxygenase, trifunctional enzyme, oxidoreductase,lyase; HET: AKG; 1.08A {Streptomyces clavuligerus} SCOP: b.82.2.2 PDB: 1drt_A* 1ds0_A 1dry_A* 1gvg_A*
Probab=51.63 E-value=10 Score=31.83 Aligned_cols=38 Identities=24% Similarity=0.407 Sum_probs=31.8
Q ss_pred ceEEecccccEEEEEecCCCCCCCCccccccCCCcc---C-eEEEEEecC
Q psy6259 181 NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVAL---G-NKWGKLLLS 226 (227)
Q Consensus 181 ~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~---G-~K~i~~~W~ 226 (227)
.+.++=++|+++||.|. +++|+-.+... | .|+....|+
T Consensus 259 ~~~~~w~~GDv~i~DN~--------~~lH~R~~f~~~~~~~~R~L~R~~v 300 (324)
T 1ds1_A 259 TEAVYLEPGDLLIVDNF--------RTTHARTPFSPRWDGKDRWLHRVYI 300 (324)
T ss_dssp CEEECCCTTCEEEEETT--------TEEEEECCCCCCCSSCCCEEEEEEE
T ss_pred cEEEeeCCCCEEEEeCC--------ceeecCCccCCCCCCCCcEEEEEEE
Confidence 57899999999999996 79999888764 3 788888875
No 33
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=49.15 E-value=14 Score=30.11 Aligned_cols=35 Identities=20% Similarity=0.150 Sum_probs=25.3
Q ss_pred ceeeeeCCCCCCCCceEEEEEEeecCCCCCceeeeCC
Q psy6259 143 YDLHCDATPRDEGLWRLASFMFYLTDVELGGATIFPS 179 (227)
Q Consensus 143 y~~H~D~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~ 179 (227)
-.||.|..... ..-..+++.-+.-+.+||+|.|-+
T Consensus 96 ~~wHtD~sy~~--~pp~~~~L~c~~~p~~GG~T~~~d 130 (283)
T 1otj_A 96 DNWHTDVTFIE--TPPAGAILAAKELPSTGGDTLWTS 130 (283)
T ss_dssp CSCBCTTTTSS--SCEEEEEEEEEECCSSCCCEEEEE
T ss_pred CCcEeeccCcc--CCCceEEEEEEecCCCCCcceeee
Confidence 35999998753 334566666666677899999976
No 34
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=47.80 E-value=13 Score=30.65 Aligned_cols=37 Identities=22% Similarity=0.134 Sum_probs=26.7
Q ss_pred CcceeeeeCCCCCCCCceEEEEEEeecCCCCCceeeeCC
Q psy6259 141 GHYDLHCDATPRDEGLWRLASFMFYLTDVELGGATIFPS 179 (227)
Q Consensus 141 ~~y~~H~D~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~ 179 (227)
+...||.|..... ..-.++++.-+.-+..||+|.|-+
T Consensus 92 ~~~~wH~D~sy~~--~pp~~~~l~~~~~p~~GG~T~~~d 128 (277)
T 3pvj_A 92 DNAVWHTDVTFLP--TPALGAVLSAKQLPAYGGDTLWAS 128 (277)
T ss_dssp GGSSCBCTTTTSS--SCCCEEEEEEEECCSSCCCEEEEE
T ss_pred cCCCceeeCCCcC--CCCceEEEEeeccCCCCCCcEeee
Confidence 4577999997654 233466666666677899999965
No 35
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=47.29 E-value=95 Score=25.71 Aligned_cols=82 Identities=17% Similarity=0.146 Sum_probs=48.7
Q ss_pred CceEEEEeCCC------CcceeeeeCCCCCCCCceEEEEEEeecCCCCCceeee-CCC-ceEEecccccEEEEEe----c
Q psy6259 130 GPLQINNYGLG------GHYDLHCDATPRDEGLWRLASFMFYLTDVELGGATIF-PSL-NLTVFPEKGSAVFWYN----A 197 (227)
Q Consensus 130 e~~~v~rY~~G------~~y~~H~D~~~~~~~~~R~~T~liYLnd~~~GGeT~F-p~~-~~~v~P~~G~al~f~~----~ 197 (227)
..+++.+|.+- -...+|.|... +|+| +.|. .||-=+. +.. =+.|+|..|.+||--- .
T Consensus 169 ~~lr~~~Ypp~~~~~~~~g~~~HtD~g~--------lTlL--~qd~-v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~ 237 (312)
T 3oox_A 169 SVLRLLHYPPIPKDATGVRAGAHGDINT--------ITLL--LGAE-EGGLEVLDRDGQWLPINPPPGCLVINIGDMLER 237 (312)
T ss_dssp CEEEEEEECCCSSCCC--CEEEECCCSS--------EEEE--ECCT-TSCEEEECTTSCEEECCCCSSCEEEEECHHHHH
T ss_pred ceeeeEecCCCCCCcCCcCccceecCce--------EEEE--eEcC-cCceEEECCCCcEEECCCCCCeEEEEhHHHHHH
Confidence 45788899762 23568888743 6777 4553 4554443 332 2689999999888321 1
Q ss_pred CCCCCCCCccccccCCCc----cCeEEEEE
Q psy6259 198 HANTLLDYRMYHSGCPVA----LGNKWGKL 223 (227)
Q Consensus 198 ~~~g~~d~~~~H~g~pV~----~G~K~i~~ 223 (227)
+.+|.. ..+.|++.... ...||.+.
T Consensus 238 ~TnG~~-kS~~HRVv~~~~~~~~~~R~Sia 266 (312)
T 3oox_A 238 LTNNVL-PSTVHRVVNPPPERRGVPRYSTP 266 (312)
T ss_dssp HTTTSS-CCCCEEECCCCGGGTTSCEEECC
T ss_pred HhCCee-cCCCceEeCCCccCCCCCEEEEE
Confidence 223333 36889986432 23577653
No 36
>3gce_A Ferredoxin component of carbazole 1,9A- dioxygenase; rieske ferredoxin, 2Fe-2S, electron transfer, oxidoreductase; 2.00A {Nocardioides aromaticivorans}
Probab=46.28 E-value=23 Score=25.13 Aligned_cols=49 Identities=18% Similarity=0.143 Sum_probs=35.0
Q ss_pred EEEEEeecCCCCCceeeeCC--CceEEecccccEEEEEecCCCCCCCCccccccCCCccC
Q psy6259 160 ASFMFYLTDVELGGATIFPS--LNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALG 217 (227)
Q Consensus 160 ~T~liYLnd~~~GGeT~Fp~--~~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G 217 (227)
+..+.-++|..+|+...|.. ..+.|.-..|.+..|.| ...|.|+|+..|
T Consensus 11 w~~v~~~~el~~g~~~~~~~~g~~v~v~r~~g~~~A~~n---------~CpH~g~~L~~G 61 (121)
T 3gce_A 11 PVRVATLDQLKPGVPTAFDVDGDEVMVVRDGDSVYAISN---------LCSHAEAYLDMG 61 (121)
T ss_dssp CEEEEEGGGSCTTCCEEEEETTEEEEEEEETTEEEEEES---------BCSSSSCBGGGS
T ss_pred cEEEEEHHHCCCCCEEEEEECCEEEEEEEECCEEEEEeC---------cCCCCCCCCCCC
Confidence 55677788888877666543 23444335788888887 699999999877
No 37
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=44.11 E-value=17 Score=30.12 Aligned_cols=38 Identities=21% Similarity=0.260 Sum_probs=26.9
Q ss_pred CCcceeeeeCCCCCCCCceEEEEEEeecCCCCCceeeeCC
Q psy6259 140 GGHYDLHCDATPRDEGLWRLASFMFYLTDVELGGATIFPS 179 (227)
Q Consensus 140 G~~y~~H~D~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~ 179 (227)
+....||.|..... ..-..+++.-+.-+.+||+|.|-+
T Consensus 102 ~~~~~wHtD~sy~~--~pP~~~~L~c~~~p~~GG~T~~ad 139 (301)
T 1oih_A 102 QRANSWHTDVTFVE--AYPKASILRSVVAPASGGDTVWAN 139 (301)
T ss_dssp -CCCSCBCTTTTSS--SCCSEEEEEEEECCSSCCCEEEEE
T ss_pred CcCcCCEecccCcC--CCCceEEEEEeecCCCCCcccccc
Confidence 34567999998754 333466666666777899999976
No 38
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=43.68 E-value=20 Score=29.71 Aligned_cols=38 Identities=11% Similarity=-0.066 Sum_probs=29.0
Q ss_pred ceEEecccccEEEEEecCCCCCCCCccccccCCCccC-eEEEEEecC
Q psy6259 181 NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALG-NKWGKLLLS 226 (227)
Q Consensus 181 ~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G-~K~i~~~W~ 226 (227)
.++.+=++|+++||.|. +++|...+-..+ .|+.-+.|+
T Consensus 241 ~~~~~w~~GDlviwDNr--------~vlH~r~~~~~~~~R~l~R~~i 279 (293)
T 3eat_X 241 HYAHRWRSDDLVIADNL--------TLLHGREAFAHRAPRHLRRVHI 279 (293)
T ss_dssp EEEECCCTTCEEEEETT--------TEEEEECCBSSCCCEEEEEEEE
T ss_pred EEEEEcCCCCEEEEeCC--------ceEEcccCCCCCCceEEEEEEE
Confidence 57788899999999996 799998876544 466555553
No 39
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=42.95 E-value=16 Score=30.55 Aligned_cols=37 Identities=27% Similarity=0.269 Sum_probs=26.3
Q ss_pred CcceeeeeCCCCCCCCceEEEEEEeecCCCCCceeeeCC
Q psy6259 141 GHYDLHCDATPRDEGLWRLASFMFYLTDVELGGATIFPS 179 (227)
Q Consensus 141 ~~y~~H~D~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~ 179 (227)
....||.|..... ..-.++++.-+.-+..||+|.|-+
T Consensus 98 ~~~~wH~D~s~~~--~pp~~~~l~~~~~p~~GG~T~fad 134 (301)
T 3r1j_A 98 KATRWHTDVTFAA--NYPAASILRAVTLPSYGGSTLWAS 134 (301)
T ss_dssp -CCSCBCTTTTSS--SCCSEEEEEEEECCSSCCCEEEEE
T ss_pred CCCCCccccCCcc--CCCceeEEEEeecCCCCCCCeeEc
Confidence 4567999998764 233466666666677899999965
No 40
>2de6_D Ferredoxin component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Pseudomonas resinovorans} PDB: 2de5_D 1vck_A 2de7_D*
Probab=40.84 E-value=37 Score=23.73 Aligned_cols=49 Identities=12% Similarity=0.009 Sum_probs=31.9
Q ss_pred EEEEEeecCCCCCceeeeCC--C-ceEEecccccEEEEEecCCCCCCCCccccccCCCccC
Q psy6259 160 ASFMFYLTDVELGGATIFPS--L-NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALG 217 (227)
Q Consensus 160 ~T~liYLnd~~~GGeT~Fp~--~-~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G 217 (227)
+..+.-++|..+|+...|.. . .+.|.-..|.+..|.| ...|.++|+..|
T Consensus 5 w~~v~~~~el~~g~~~~~~~~g~~~v~v~r~~g~~~A~~n---------~CpH~g~~L~~g 56 (115)
T 2de6_D 5 WLKVCAASDMQPGTIRRVNRVGAAPLAVYRVGDQFYATED---------TCTHGIASLSEG 56 (115)
T ss_dssp CEEEEEGGGCCTTEEEEEEETTEEEEEEEEETTEEEEEES---------BCTTSSCBGGGS
T ss_pred eEEeEEHHHCCCCCeEEEEECCccEEEEEEECCEEEEEeC---------CCCCCCCCCcCC
Confidence 34566677777776555532 2 2333223777777777 699999999876
No 41
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=40.77 E-value=14 Score=31.08 Aligned_cols=35 Identities=17% Similarity=0.058 Sum_probs=27.7
Q ss_pred ceEEecccccEEEEEecCCCCCCCCccccccCCCccCeEEEEEe
Q psy6259 181 NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGNKWGKLL 224 (227)
Q Consensus 181 ~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G~K~i~~~ 224 (227)
.+.++=++|+++||.|. +++|+..+- .|.+.++..
T Consensus 293 ~~~~~w~~GDv~i~DN~--------~~lH~R~~f-~g~rR~l~r 327 (330)
T 2q4a_A 293 CVAVPWQRGDVLLIDNW--------AVLHSRRPF-DPPRRVLAS 327 (330)
T ss_dssp CBCCCCCTTCEEEEETT--------TEEEEECCE-ESCCEEEEE
T ss_pred EeecCCCCCCEEEEecc--------cccccCCCC-CCCceEEEe
Confidence 46788899999999996 799999995 675555543
No 42
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=40.71 E-value=8.5 Score=34.45 Aligned_cols=61 Identities=28% Similarity=0.461 Sum_probs=44.0
Q ss_pred CceEEEEEEeecCC--CCCceeeeCCC-----------------------------------------ceEEe--ccccc
Q psy6259 156 LWRLASFMFYLTDV--ELGGATIFPSL-----------------------------------------NLTVF--PEKGS 190 (227)
Q Consensus 156 ~~R~~T~liYLnd~--~~GGeT~Fp~~-----------------------------------------~~~v~--P~~G~ 190 (227)
..|.+.=.+-|++. .+||--+.|.. .+... -+.|+
T Consensus 296 ~FR~fQGwlaLS~~gP~eGtL~v~P~~~atAY~LLRpFf~~~~d~~~~Ga~pg~~q~~~~~~HP~L~~~mv~iP~vePGD 375 (461)
T 2dbn_A 296 VFRTFQGWTALSDMLPGQGLLHVVPIPEAMAYVLLRPLLDDVPEDELCGVAPGRVLPVSEQWHPLLIEALTSIPKLEAGD 375 (461)
T ss_dssp SCCSEEEEEESSCBCTTSSCEEECSCTTHHHHHHHGGGSTTSCTTCCTTCCTTSCEECCTTTCHHHHTTCEECCCBCTTC
T ss_pred ccceeeeehhccCCCCCCCcEEEeechhhHHHHhhhhhhccCCcccccCCCCCcccCCCcccCCcccCceeeCCCCCCCC
Confidence 46777778888875 46776667620 23344 47899
Q ss_pred EEEEEecCCCCCCCCccccccCCCccCeEEEEEec
Q psy6259 191 AVFWYNAHANTLLDYRMYHSGCPVALGNKWGKLLL 225 (227)
Q Consensus 191 al~f~~~~~~g~~d~~~~H~g~pV~~G~K~i~~~W 225 (227)
.|+|.+ ++.|++.++..|..+..++.
T Consensus 376 ~V~WH~---------D~iH~V~~~h~g~~~s~V~Y 401 (461)
T 2dbn_A 376 SVWWHC---------DVIHSVAPVENQQGWGNVMY 401 (461)
T ss_dssp EEEEET---------TCCEEECCBSSCCSCCCEEE
T ss_pred EEEEcC---------CCccccccCCCCCcceeEEE
Confidence 999998 69999999999877655543
No 43
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=39.45 E-value=18 Score=29.82 Aligned_cols=38 Identities=13% Similarity=0.032 Sum_probs=29.6
Q ss_pred ceEEecccccEEEEEecCCCCCCCCccccccCCCccC-eEEEEEecC
Q psy6259 181 NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALG-NKWGKLLLS 226 (227)
Q Consensus 181 ~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G-~K~i~~~W~ 226 (227)
.+.++=++|+++||.|. +++|+..+-..+ .|+.-..|+
T Consensus 244 ~~~~~w~~GDvvi~DNr--------~~lH~r~~f~~~~~R~l~R~~i 282 (301)
T 1oih_A 244 TVRWRWEAGDVAIWDNR--------ATQHYAVDDYGTQPRIVRRVTL 282 (301)
T ss_dssp EEEECCCTTCEEEEETT--------SEEEEECCCCTTSCCEEEEEEE
T ss_pred eEEEEEcCCCEEEEEcc--------ceeecccCCCCCCceEEEEEEE
Confidence 57888899999999996 689998886643 666666554
No 44
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=39.43 E-value=1e+02 Score=25.73 Aligned_cols=97 Identities=6% Similarity=-0.080 Sum_probs=55.6
Q ss_pred HhccCCCcccc----cccCCceE--EEEeC------C-------C---CcceeeeeCCCCCCCCceEEEEEEeecCCCCC
Q psy6259 115 QDMTNLVIGRE----ERYKGPLQ--INNYG------L-------G---GHYDLHCDATPRDEGLWRLASFMFYLTDVELG 172 (227)
Q Consensus 115 ~~~~g~~~~~~----~~~~e~~~--v~rY~------~-------G---~~y~~H~D~~~~~~~~~R~~T~liYLnd~~~G 172 (227)
...+|++.... ......++ +.+|. + . -...+|.|... +|+|+. |. .|
T Consensus 161 a~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~--------lTlL~q--d~-v~ 229 (331)
T 1odm_A 161 ALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSL--------ITVLYQ--SN-VQ 229 (331)
T ss_dssp HHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSS--------EEEEEE--CS-SC
T ss_pred HHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCe--------EEEEee--CC-CC
Confidence 33467654421 01234578 99997 4 1 13678888743 677754 43 45
Q ss_pred ceeee-CCCceEEecccccEEEEEe----cCCCCCCCCccccccCCCccCeEEEEEe
Q psy6259 173 GATIF-PSLNLTVFPEKGSAVFWYN----AHANTLLDYRMYHSGCPVALGNKWGKLL 224 (227)
Q Consensus 173 GeT~F-p~~~~~v~P~~G~al~f~~----~~~~g~~d~~~~H~g~pV~~G~K~i~~~ 224 (227)
|-=+. ++.=+.|+|..|.+||--- .+.+|.. ..+.|++... ...||.+..
T Consensus 230 GLQV~~~~gWi~V~p~pgalvVNiGD~l~~~TnG~~-kS~~HRVv~~-~~~R~Sia~ 284 (331)
T 1odm_A 230 NLQVETAAGYQDIEADDTGYLINCGSYMAHLTNNYY-KAPIHRVKWV-NAERQSLPF 284 (331)
T ss_dssp CEEEEETTEEEECCCCTTSEEEEECHHHHHHTTTSS-CCCCEEEECC-CSCEEEEEE
T ss_pred CEEEEcCCCeEECCCCCCeEEEEccHHHHHHhCCEe-eCCCceeCCC-CCCEEEEEE
Confidence 64445 2223679999999888321 1223332 3688998532 457887653
No 45
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=39.12 E-value=20 Score=28.96 Aligned_cols=37 Identities=19% Similarity=0.141 Sum_probs=25.1
Q ss_pred CcceeeeeCCCCCCCCceEEEEEEeecCCC--CCceeeeCC
Q psy6259 141 GHYDLHCDATPRDEGLWRLASFMFYLTDVE--LGGATIFPS 179 (227)
Q Consensus 141 ~~y~~H~D~~~~~~~~~R~~T~liYLnd~~--~GGeT~Fp~ 179 (227)
....||.|..... ..-..+++.=+.-+. +||+|.|-+
T Consensus 96 ~~~~~HtD~sy~~--~pp~~~~L~c~~~p~~~~GG~T~~~d 134 (273)
T 1nx8_A 96 GQLPFHADGGLLL--SQVDQVFLYAAEIKNVKFRGATTVCD 134 (273)
T ss_dssp SCEEEECTTTTTT--CCCCEEEEEEEEEESCSSSSCEEEEE
T ss_pred cCCCCcCCCCCcc--CCCeeEEEEeEeCCCCCCCCcchhhh
Confidence 4567999997653 222455555556566 899999976
No 46
>2q4a_A Clavaminate synthase-like protein AT3G21360; ensemble refinement, refinement methodology development, AT3 structural genomics; 2.39A {Arabidopsis thaliana} SCOP: b.82.2.8 PDB: 1y0z_A
Probab=39.01 E-value=19 Score=30.17 Aligned_cols=38 Identities=13% Similarity=0.186 Sum_probs=26.6
Q ss_pred CCcceeeeeCCCCCCCCceEEEEEEeecCCCCCceeeeCC
Q psy6259 140 GGHYDLHCDATPRDEGLWRLASFMFYLTDVELGGATIFPS 179 (227)
Q Consensus 140 G~~y~~H~D~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~ 179 (227)
+....||.|..... ..-..+++.-+.-+.+||+|.|-+
T Consensus 114 ~~~~~~HtD~sy~~--~pP~~~~L~c~~~p~~GG~T~~ad 151 (330)
T 2q4a_A 114 DQKIPFHHEMAQVR--EFPSKLFFYCEIEPKCGGETPIVL 151 (330)
T ss_dssp TSCEEEECTTTTST--TCCSEEEEEEEECCSEECCCCEEE
T ss_pred ccccccccccCCCC--CCCceEEEECcCCCCcCCceeeec
Confidence 45677999987654 222456666666677899999876
No 47
>1fqt_A Rieske-type ferredoxin of biphenyl dioxygenase; 2Fe-2S cluster, beta sandwich, oxido; 1.60A {Burkholderia xenovorans} SCOP: b.33.1.1 PDB: 2e4q_A 2e4p_A 2yvj_B*
Probab=38.06 E-value=50 Score=22.78 Aligned_cols=49 Identities=20% Similarity=0.161 Sum_probs=32.4
Q ss_pred EEEEEeecCCCCCceeeeCCC--ceEEecccccEEEEEecCCCCCCCCccccccCCCccC
Q psy6259 160 ASFMFYLTDVELGGATIFPSL--NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALG 217 (227)
Q Consensus 160 ~T~liYLnd~~~GGeT~Fp~~--~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G 217 (227)
+..+.-++|..+|+...|... .+.|.-..|.+..|.| ...|.++|+..|
T Consensus 6 w~~v~~~~~l~~g~~~~~~~~g~~i~v~r~~g~~~A~~n---------~CpH~g~~L~~g 56 (112)
T 1fqt_A 6 FTRVCDRRDVPEGEALKVESGGTSVAIFNVDGELFATQD---------RCTHGDWSLSDG 56 (112)
T ss_dssp CEEEEEGGGSCTTCEEEEEETTEEEEEEEETTEEEEEES---------BCTTSSCBSSTT
T ss_pred eEEeEeHHHCCCCCeEEEEECCEEEEEEEECCEEEEEEC---------CCCCCCcCCCCC
Confidence 345566777777665555322 3333223788888877 699999998877
No 48
>1rie_A Rieske iron-sulfur protein; oxidoreductase, cytochrome BC1 complex, histidine ligands, rieske iron-sulfur cluster, electron transport; 1.50A {Bos taurus} SCOP: b.33.1.1
Probab=37.99 E-value=36 Score=24.52 Aligned_cols=21 Identities=24% Similarity=0.218 Sum_probs=17.9
Q ss_pred cccEEEEEecCCCCCCCCccccccCCCccC
Q psy6259 188 KGSAVFWYNAHANTLLDYRMYHSGCPVALG 217 (227)
Q Consensus 188 ~G~al~f~~~~~~g~~d~~~~H~g~pV~~G 217 (227)
.|....|.| .+.|.|||+..|
T Consensus 62 ~g~~~a~~~---------~C~H~g~~l~~g 82 (129)
T 1rie_A 62 KPEWVILIG---------VCTHLGCVPIAN 82 (129)
T ss_dssp STTEEEEEC---------CCTTTSCCCEET
T ss_pred CCeEEEEEC---------ccCCCCeecccc
Confidence 788888888 699999999776
No 49
>3azc_A Cytochrome B6-F complex iron-sulfur subunit; rieske, thermosynechococcus elongatu photosynthesis, electron transport; 2.00A {Thermosynechococcus elongatus}
Probab=44.01 E-value=6.9 Score=28.88 Aligned_cols=53 Identities=15% Similarity=0.081 Sum_probs=37.4
Q ss_pred ceEEEEEEeecCCCCCceeeeCC----CceEEeccccc--EEEEEecCCCCCCCCccccccCCCccCe
Q psy6259 157 WRLASFMFYLTDVELGGATIFPS----LNLTVFPEKGS--AVFWYNAHANTLLDYRMYHSGCPVALGN 218 (227)
Q Consensus 157 ~R~~T~liYLnd~~~GGeT~Fp~----~~~~v~P~~G~--al~f~~~~~~g~~d~~~~H~g~pV~~G~ 218 (227)
..-+++.-||.|...|+...+.. ..+.|+-..|. +..|.| .+.|.++|+..|.
T Consensus 14 g~~v~~~~~~~~l~~g~~~~v~~l~g~~~vlv~~~~G~~~v~A~~n---------~CpH~g~~L~~g~ 72 (133)
T 3azc_A 14 GNDIKVSEYLAKHLPGDRSLAQGIKGDPTYVIVTEDHQIANYGLNA---------VCTHLGCVVPWNV 72 (133)
Confidence 45577888899988888766652 23455556676 666666 6999999997663
No 50
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=37.25 E-value=79 Score=25.21 Aligned_cols=76 Identities=20% Similarity=0.241 Sum_probs=45.1
Q ss_pred cCCce--EEEEeCCCCcceeeeeCCCCCCCCceEEEEEEeecCCCCCceeeeCCC-ceEEecccccEEEEEecCCCCCCC
Q psy6259 128 YKGPL--QINNYGLGGHYDLHCDATPRDEGLWRLASFMFYLTDVELGGATIFPSL-NLTVFPEKGSAVFWYNAHANTLLD 204 (227)
Q Consensus 128 ~~e~~--~v~rY~~G~~y~~H~D~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~-~~~v~P~~G~al~f~~~~~~g~~d 204 (227)
..+.+ -+....+|..|.+|.-... -+..++ -|+.+|--. +-.+....|++++.+.
T Consensus 128 ~s~~l~lG~v~l~PG~~yP~HsHp~E------Eiy~VL--------sG~~e~~v~~g~~~~l~pGd~v~ips-------- 185 (217)
T 4b29_A 128 LTQSLRVTVGYWGPGLDYGWHEHLPE------ELYSVV--------SGRALFHLRNAPDLMLEPGQTRFHPA-------- 185 (217)
T ss_dssp ECSSCEEEEEEECSSCEEEEEECSSE------EEEEEE--------EECEEEEETTSCCEEECTTCEEEECT--------
T ss_pred CCCeEEEEEEEECCCCcCCCCCCCCc------eEEEEE--------eCCEEEEECCCCEEecCCCCEEEcCC--------
Confidence 34444 4456789999999986422 222222 233333222 4456778899999887
Q ss_pred CccccccCCCccCeEEEEEecCC
Q psy6259 205 YRMYHSGCPVALGNKWGKLLLSG 227 (227)
Q Consensus 205 ~~~~H~g~pV~~G~K~i~~~W~~ 227 (227)
...|+.. ..+..=.++..|.|
T Consensus 186 -gv~Ha~r-t~dePllalwvW~G 206 (217)
T 4b29_A 186 -NAPHAMT-TLTDPILTLVLWRG 206 (217)
T ss_dssp -TCCEEEE-CCSSCEEEEEEEES
T ss_pred -CCceeEE-ECCccEEEEEEEeC
Confidence 5788886 33344455666654
No 51
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=37.13 E-value=1.1e+02 Score=23.81 Aligned_cols=77 Identities=17% Similarity=0.050 Sum_probs=49.1
Q ss_pred CceEEEEeCCCCcceeeeeCCCCCCCCceEEEEEEeecCCCCCceeeeCCCceEEecccccEEEEEecCCCCCCCCcccc
Q psy6259 130 GPLQINNYGLGGHYDLHCDATPRDEGLWRLASFMFYLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYH 209 (227)
Q Consensus 130 e~~~v~rY~~G~~y~~H~D~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~v~P~~G~al~f~~~~~~g~~d~~~~H 209 (227)
....+.+-.+|.+-.+|+|... -.+++-+=|--+.+| ..|--.+....=+.|.+++|.. ...|
T Consensus 102 ~~a~fs~L~pG~~I~pH~g~~n------~~lR~HL~L~~p~~~--~~i~V~~~~~~w~eGe~~~fDd---------s~~H 164 (197)
T 3rcq_A 102 GQIKYSIMHPGTHVWPHTGPTN------CRLRMHLGLVIPKEG--CKIRCANETKTWEEGKVLIFDD---------SFEH 164 (197)
T ss_dssp CEEEEEEECTTEEEEEECCSCT------TEEEEEEEEECCSSS--EEEEETTEEECCCBTCEEEECT---------TSCE
T ss_pred ceEEEEEeCCCCCcCCeeCCCC------CeEEEEEEEEeCCCC--cEEEECCEEEEeeCCcEEEEcC---------CeEE
Confidence 3578889999999999999642 234444444433321 1222224455557899999976 5778
Q ss_pred ccCCCccCeEEEEE
Q psy6259 210 SGCPVALGNKWGKL 223 (227)
Q Consensus 210 ~g~pV~~G~K~i~~ 223 (227)
++---..+.|.++.
T Consensus 165 ev~N~~d~~RvvL~ 178 (197)
T 3rcq_A 165 EVWQDASSFRLIFI 178 (197)
T ss_dssp EEEECSSSCEEEEE
T ss_pred EEEECCCCCEEEEE
Confidence 77666667777654
No 52
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=36.74 E-value=30 Score=28.62 Aligned_cols=36 Identities=22% Similarity=0.163 Sum_probs=23.8
Q ss_pred cceeeeeCCCCCCCCceEEEEEEeecCCC--CCceeeeCC
Q psy6259 142 HYDLHCDATPRDEGLWRLASFMFYLTDVE--LGGATIFPS 179 (227)
Q Consensus 142 ~y~~H~D~~~~~~~~~R~~T~liYLnd~~--~GGeT~Fp~ 179 (227)
...||.|..... ..-.++++.-+.-+. .||+|.|-+
T Consensus 108 ~~~wHtD~sy~~--~pp~~~~L~c~~~p~~~~GG~T~~~d 145 (293)
T 3eat_X 108 YVPLHWDGMYLE--TVPEFQVFHCVDAPGDSDGGRTTFSS 145 (293)
T ss_dssp CEEEECTTTTSS--EEEEEEEEEEEECCSCCSBCCEEEEE
T ss_pred CccceECCCCcC--CCCceEEEEeEeCCCCCCCCceEEee
Confidence 456999998653 233455555555454 799999965
No 53
>1rfs_A Rieske protein; iron-sulfur protein, electron transport; 1.83A {Spinacia oleracea} SCOP: b.33.1.1 PDB: 1q90_C*
Probab=35.64 E-value=17 Score=26.71 Aligned_cols=44 Identities=20% Similarity=0.246 Sum_probs=28.7
Q ss_pred eecCCCCCceeeeCCC----ceEEecccccE--EEEEecCCCCCCCCccccccCCCccC
Q psy6259 165 YLTDVELGGATIFPSL----NLTVFPEKGSA--VFWYNAHANTLLDYRMYHSGCPVALG 217 (227)
Q Consensus 165 YLnd~~~GGeT~Fp~~----~~~v~P~~G~a--l~f~~~~~~g~~d~~~~H~g~pV~~G 217 (227)
+++|..+||...+... .+.|+-..|.+ ..|.| .+.|.++|+..|
T Consensus 28 ~~~dlp~g~~~~~~~~~g~~~ilv~~~~G~i~~~A~~n---------~CpH~g~~L~~g 77 (139)
T 1rfs_A 28 WLKTHAPGDRTLTQGLKGDPTYLVVESDKTLATFGINA---------VCTHLGCVVPFN 77 (139)
T ss_dssp HHHHSCTTCEEEEECGGGCEEEEEBCTTSSBCSEEEEC---------BCTTTCCBCCEE
T ss_pred hHhhCCCCccEEEEecCCCeEEEEEeCCCcEEEEEEeC---------cCCCCCCCCccC
Confidence 3666777776555421 24556667776 66666 699999999754
No 54
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=34.55 E-value=91 Score=20.96 Aligned_cols=68 Identities=7% Similarity=-0.092 Sum_probs=38.8
Q ss_pred eEEEEeCCCCcceeeeeCCCCCCCCceEEEEEEeecCCCCCceeeeCCCceEEecccccEEEEEecCCCCCCCCcccccc
Q psy6259 132 LQINNYGLGGHYDLHCDATPRDEGLWRLASFMFYLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSG 211 (227)
Q Consensus 132 ~~v~rY~~G~~y~~H~D~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g 211 (227)
+.+..+.+|..+.+|.-. ..-+..++ -|+..+--.+-.+.-++|++++++. ...|..
T Consensus 40 ~~~~~~~~g~~~~~H~h~------~~e~~~vl--------~G~~~~~i~~~~~~l~~Gd~i~i~~---------~~~H~~ 96 (114)
T 2ozj_A 40 ISLFSFADGESVSEEEYF------GDTLYLIL--------QGEAVITFDDQKIDLVPEDVLMVPA---------HKIHAI 96 (114)
T ss_dssp EEEEEEETTSSCCCBCCS------SCEEEEEE--------EEEEEEEETTEEEEECTTCEEEECT---------TCCBEE
T ss_pred EEEEEECCCCccccEECC------CCeEEEEE--------eCEEEEEECCEEEEecCCCEEEECC---------CCcEEE
Confidence 444556788877777421 11222222 2333333234567788999999987 577776
Q ss_pred CCCccCeEEEEE
Q psy6259 212 CPVALGNKWGKL 223 (227)
Q Consensus 212 ~pV~~G~K~i~~ 223 (227)
... .+.++++.
T Consensus 97 ~~~-~~~~~~~i 107 (114)
T 2ozj_A 97 AGK-GRFKMLQI 107 (114)
T ss_dssp EEE-EEEEEEEE
T ss_pred EeC-CCcEEEEE
Confidence 653 45555544
No 55
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=34.44 E-value=33 Score=29.65 Aligned_cols=36 Identities=11% Similarity=0.132 Sum_probs=25.9
Q ss_pred cceeeeeCCCCCCCCceEEEEEEeecCCCCCceeeeCC
Q psy6259 142 HYDLHCDATPRDEGLWRLASFMFYLTDVELGGATIFPS 179 (227)
Q Consensus 142 ~y~~H~D~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~ 179 (227)
...||.|..... ..-.+++|.-+.-+.+||+|.|-+
T Consensus 199 ~l~~HtD~sy~~--~pp~~~~L~c~~~~~~GG~T~~~d 234 (388)
T 3o2g_A 199 KLSFHTDYPALH--HPPGVQLLHCIKQTVTGGDSEIVD 234 (388)
T ss_dssp CEEEECSCTTSS--SCCSEEEEEEEECCSSSCCEEEEE
T ss_pred CcccccCCCccC--CCCcEEEEEEEecCCCCCcCeeec
Confidence 356999997654 223456777777777999999965
No 56
>3c0d_A Putative nitrite reductase NADPH (small subunit) oxidoreductase protein; NESG, VPR162, Q87HB1, XRAY, structure; 2.40A {Vibrio parahaemolyticus rimd 2210633} SCOP: b.33.1.3
Probab=33.99 E-value=52 Score=23.09 Aligned_cols=50 Identities=6% Similarity=-0.138 Sum_probs=34.1
Q ss_pred EEEEEeecCCCCCceeeeCC--CceE-EecccccEEEEEecCCCCCCCCccccccC-CCccCe
Q psy6259 160 ASFMFYLTDVELGGATIFPS--LNLT-VFPEKGSAVFWYNAHANTLLDYRMYHSGC-PVALGN 218 (227)
Q Consensus 160 ~T~liYLnd~~~GGeT~Fp~--~~~~-v~P~~G~al~f~~~~~~g~~d~~~~H~g~-pV~~G~ 218 (227)
+..+.-++|..+|+...|.. ..+. ++-..|.+..|.| ...|.++ |+..|.
T Consensus 6 w~~v~~~~el~~g~~~~~~~~g~~v~v~r~~~G~~~A~~n---------~CpH~g~~~L~~G~ 59 (119)
T 3c0d_A 6 KVKLCQLDDLMPFIGATVLIEGERVALFYIPDSGVYAVQD---------WDPIGKAYVMSRGI 59 (119)
T ss_dssp EEEEEEGGGSCBTCCEEEEETTEEEEEEEETTTEEEEEES---------EETTTTEECGGGSE
T ss_pred cEEEEEHHHCCCCCeEEEEECCeEEEEEEecCCeEEEEeC---------CCCCCCCccCCCeE
Confidence 55667788887776555532 2333 3445788888887 6999999 787763
No 57
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=33.92 E-value=1.2e+02 Score=23.54 Aligned_cols=72 Identities=15% Similarity=0.090 Sum_probs=44.0
Q ss_pred eEEEEeCCCCcceeeeeCCCCCCCCceEEEEEEeecCCCCCceeeeCCCceEEecccccEEEEEecCCCCCCCCcccccc
Q psy6259 132 LQINNYGLGGHYDLHCDATPRDEGLWRLASFMFYLTDVELGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSG 211 (227)
Q Consensus 132 ~~v~rY~~G~~y~~H~D~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g 211 (227)
+.+..+.+|+...+|.-. ..-.+.++ -|+..+--.+-...-++|++++++. ...|+.
T Consensus 155 ~~~~~~~~G~~~~~H~H~------~~e~~~Vl--------~G~~~~~i~g~~~~l~~Gd~i~ip~---------~~~H~~ 211 (227)
T 3rns_A 155 MTIMSFWKGESLDPHKAP------GDALVTVL--------DGEGKYYVDGKPFIVKKGESAVLPA---------NIPHAV 211 (227)
T ss_dssp EEEEEECTTCEEEEECCS------SEEEEEEE--------EEEEEEEETTEEEEEETTEEEEECT---------TSCEEE
T ss_pred EEEEEECCCCccCCEECC------CcEEEEEE--------eEEEEEEECCEEEEECCCCEEEECC---------CCcEEE
Confidence 344567888888887521 11122222 3333433334567788999999987 477876
Q ss_pred CCCccCeEEEEEecC
Q psy6259 212 CPVALGNKWGKLLLS 226 (227)
Q Consensus 212 ~pV~~G~K~i~~~W~ 226 (227)
.......|++++.+.
T Consensus 212 ~~~~~~~~~ll~~v~ 226 (227)
T 3rns_A 212 EAETENFKMLLILVK 226 (227)
T ss_dssp ECCSSCEEEEEEEEC
T ss_pred EeCCCCEEEEEEEEe
Confidence 552456888887763
No 58
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=33.57 E-value=91 Score=21.81 Aligned_cols=50 Identities=14% Similarity=0.104 Sum_probs=30.3
Q ss_pred eEEEEeCCCCcceeeeeCCCCCCCCceEEEEEEeecCCCCCceeeeCCCceEEecccccEEEEEe
Q psy6259 132 LQINNYGLGGHYDLHCDATPRDEGLWRLASFMFYLTDVELGGATIFPSLNLTVFPEKGSAVFWYN 196 (227)
Q Consensus 132 ~~v~rY~~G~~y~~H~D~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~~~~~v~P~~G~al~f~~ 196 (227)
..+.+..+|+.+.+|.+. .-.+.++ +| +..+-..+-.+.-++|++++++.
T Consensus 42 ~~~~~~~pG~~~~~H~~~-------~E~~~Vl-------~G-~~~~~~~g~~~~l~~GD~v~ip~ 91 (119)
T 3lwc_A 42 IGYGRYAPGQSLTETMAV-------DDVMIVL-------EG-RLSVSTDGETVTAGPGEIVYMPK 91 (119)
T ss_dssp EEEEEECTTCEEEEECSS-------EEEEEEE-------EE-EEEEEETTEEEEECTTCEEEECT
T ss_pred EEEEEECCCCCcCccCCC-------CEEEEEE-------eC-EEEEEECCEEEEECCCCEEEECC
Confidence 456778899999999621 1122222 23 22222234567778999999987
No 59
>2wbq_A L-arginine beta-hydroxylase; oxidoreductase, non-heme Fe(II) hydroxylase, cbeta- hydroxylation, L-arginine oxygenase, NRPS, viomycin; HET: ZZU; 1.10A {Streptomyces vinaceus} PDB: 2wbp_A* 2wbo_A*
Probab=33.20 E-value=35 Score=28.87 Aligned_cols=36 Identities=14% Similarity=0.077 Sum_probs=23.9
Q ss_pred CcceeeeeCCCCCCCCceEEEEEEeecCCCCCceeeeCC
Q psy6259 141 GHYDLHCDATPRDEGLWRLASFMFYLTDVELGGATIFPS 179 (227)
Q Consensus 141 ~~y~~H~D~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~ 179 (227)
+...||.|..... ..-.+++|.-|.-+. ||+|.|-+
T Consensus 163 ~~l~~HtD~sy~~--~pp~~~~L~cl~~p~-gG~T~~ad 198 (358)
T 2wbq_A 163 QELGWHTEDAFSP--YRADYVGLLSLRNPD-GVATTLAG 198 (358)
T ss_dssp SCEEEECTTTTCT--TCCSEEEEEEEECTT-CCEEEEEE
T ss_pred CCccccccCCCCC--CCCCeEEEEeEecCC-CCCceEEe
Confidence 3467999987654 222355665566666 99999865
No 60
>2jo6_A Nitrite reductase [NAD(P)H] small subunit; all beta, ISP domain, rieske iron-sulfur protein, 3-layer sandwich, structural genomics, PSI-2; NMR {Escherichia coli} SCOP: b.33.1.3
Probab=32.83 E-value=62 Score=22.29 Aligned_cols=49 Identities=8% Similarity=-0.126 Sum_probs=32.2
Q ss_pred EEEEEeecCCCCCceeeeCCC--ceE-Eecccc-cEEEEEecCCCCCCCCccccccC-CCccC
Q psy6259 160 ASFMFYLTDVELGGATIFPSL--NLT-VFPEKG-SAVFWYNAHANTLLDYRMYHSGC-PVALG 217 (227)
Q Consensus 160 ~T~liYLnd~~~GGeT~Fp~~--~~~-v~P~~G-~al~f~~~~~~g~~d~~~~H~g~-pV~~G 217 (227)
+..+.-++|..+|+...|... .+. ++-..| ++..|.| ...|.++ |+..|
T Consensus 7 w~~v~~~~el~~g~~~~~~~~g~~i~v~r~~~g~~~~A~~n---------~CpH~g~~~L~~G 60 (113)
T 2jo6_A 7 WKDICKIDDILPETGVCALLGDEQVAIFRPYHSDQVFAISN---------IDPFFESSVLSRG 60 (113)
T ss_dssp CEEEEETTTSCTTEEEEEEETTEEEEEEECSSSSCCEEEES---------SCSSSCCSCSTTS
T ss_pred heEEeeHHHCCCCCeEEEEECCEEEEEEEECCCCEEEEEeC---------cCCCCCCcccCCe
Confidence 455667778777765555322 333 344577 5777777 6999999 78766
No 61
>3gcf_A Terminal oxygenase component of carbazole 1,9A- dioxygenase; rieske oxygenase, 2Fe-2S, electron transfer, oxidoreductase; 2.30A {Nocardioides aromaticivorans}
Probab=30.63 E-value=62 Score=28.26 Aligned_cols=52 Identities=13% Similarity=0.043 Sum_probs=36.6
Q ss_pred ceEEEEEEeecCCCCCceeeeCCC--ceE-EecccccEEEEEecCCCCCCCCccccccCCCccCe
Q psy6259 157 WRLASFMFYLTDVELGGATIFPSL--NLT-VFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGN 218 (227)
Q Consensus 157 ~R~~T~liYLnd~~~GGeT~Fp~~--~~~-v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G~ 218 (227)
.+.+..+...+++.+|+-..+.-. .+. ++ ..|.+-.|.| .+.|+|+|+..|.
T Consensus 32 ~~~W~~V~~~~ELp~G~~~~v~i~G~~VvV~R-~dG~v~A~~N---------~CpHRGa~Ls~G~ 86 (394)
T 3gcf_A 32 DNHWHPAAFDHELAEGEFVAVTMLGEKVLLTR-AKGEVKAIAD---------GCAHRGVPFSKEP 86 (394)
T ss_dssp ESEEEEEEEGGGCCBTCEEEEEETTEEEEEEE-ETTEEEEEES---------SCTTTCCCGGGSC
T ss_pred cccCEEEEEHHHCCCCCeEEEEECCEEEEEEE-eCCeEEEeeC---------cCCCCCCCCcCCc
Confidence 356677777888777655554332 333 45 7888888888 6999999998763
No 62
>3gkq_A Terminal oxygenase component of carbazole 1,9A- dioxygenase; rieske nonheme iron oxygenase, electron transfer, putidaredoxin-type ferredoxin; 2.10A {Sphingomonas}
Probab=30.47 E-value=61 Score=28.27 Aligned_cols=52 Identities=12% Similarity=-0.035 Sum_probs=36.3
Q ss_pred ceEEEEEEeecCCCCCceeeeCCC--ce-EEecccccEEEEEecCCCCCCCCccccccCCCccCe
Q psy6259 157 WRLASFMFYLTDVELGGATIFPSL--NL-TVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGN 218 (227)
Q Consensus 157 ~R~~T~liYLnd~~~GGeT~Fp~~--~~-~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G~ 218 (227)
.+.+..+...+++.+|+-..+.-. .+ -++ ..|.+-.|.| .+.|+|+|+..|.
T Consensus 29 ~~~W~~V~~~~ELp~G~~~~v~i~G~~VvV~R-~dG~v~A~~N---------~CpHRGa~Ls~G~ 83 (389)
T 3gkq_A 29 RNHWYPVRLSAEVAEASPVPVQLLGEKVLLNR-VDGVVHAIAD---------RCLHRGVTLSDKV 83 (389)
T ss_dssp SSEEEEEEEGGGSCBTCCEEEEETTEEEEEEE-ETTEEEEEES---------SCTTTCCCGGGGC
T ss_pred cCccEEEEEHHHCCCCCeEEEEECCEEEEEEE-eCCeEEEeCC---------cCCCCCCCccCCc
Confidence 455677777777776655544322 23 345 7888889888 6999999998763
No 63
>2og5_A Putative oxygenase; non-ribosomal peptide synthesis, iron(II)/alpha-ketoglutarat dependent hydroxylase, jelly-roll fold; 1.45A {Streptomyces coelicolor} PDB: 2og6_A 2og7_A*
Probab=29.39 E-value=42 Score=28.50 Aligned_cols=37 Identities=11% Similarity=0.060 Sum_probs=25.1
Q ss_pred CcceeeeeCCCCCCCCceEEEEEEeecCCCCCceeeeCC
Q psy6259 141 GHYDLHCDATPRDEGLWRLASFMFYLTDVELGGATIFPS 179 (227)
Q Consensus 141 ~~y~~H~D~~~~~~~~~R~~T~liYLnd~~~GGeT~Fp~ 179 (227)
....||.|..... ..-.+++|.-|.-+.+||+|.|-+
T Consensus 174 ~~l~~HtD~sy~~--~pP~~~~L~cl~~~~~GG~t~~~~ 210 (357)
T 2og5_A 174 TLLTFHNENAFHE--HRPDFVMLLCLRADPTGRAGLRTA 210 (357)
T ss_dssp SCEEEECTTTTCT--TCCSEEEEEEEECCTTSCCCEEEE
T ss_pred ccccccccCCCCC--CCCCeEEEEEEccCCCCCccEEEe
Confidence 3456999987653 233466666677778899987643
No 64
>2jza_A Nitrite reductase [NAD(P)H] small subunit; ISP domain, rieske iron-sulfur protein, 3-layer beta- sandwich; NMR {Pectobacterium atrosepticum SCRI1043} SCOP: b.33.1.3
Probab=27.90 E-value=71 Score=22.79 Aligned_cols=49 Identities=12% Similarity=0.031 Sum_probs=31.2
Q ss_pred EEEEEeecCCCCCceeeeCCC--ceE-Eecccc-cEEEEEecCCCCCCCCccccccCC-CccC
Q psy6259 160 ASFMFYLTDVELGGATIFPSL--NLT-VFPEKG-SAVFWYNAHANTLLDYRMYHSGCP-VALG 217 (227)
Q Consensus 160 ~T~liYLnd~~~GGeT~Fp~~--~~~-v~P~~G-~al~f~~~~~~g~~d~~~~H~g~p-V~~G 217 (227)
+..+.-++|..+|+...|.-. .+. ++-..| .+..|.| ...|.|++ +..|
T Consensus 4 w~~v~~~~el~~g~~~~~~~~g~~i~v~r~~~g~~v~A~~n---------~CpH~g~~~L~~G 57 (130)
T 2jza_A 4 WTTVCKLDDILPGTGVCALVEQQQIAVFRPRNDEQVYAISN---------IDPFAQASVLSRG 57 (130)
T ss_dssp EEEEEETTTSCTTBCCEEEETTEEEEEEBCSSSSCCEEEBC---------CCTTTSSGGGTSS
T ss_pred eEEEEEHHHCCCCCeEEEEECCcEEEEEEECCCCEEEEEeC---------cCCCCCCCcCCCc
Confidence 455667788777765554322 333 333456 6777776 69999994 7766
No 65
>2pp6_A Gifsy-2 prophage ATP-binding sugar transporter-LI protein; beta barrel, 4 helix bundle, structural genomics, PSI-2; 2.70A {Salmonella typhimurium LT2} SCOP: b.106.1.2
Probab=26.94 E-value=39 Score=23.67 Aligned_cols=12 Identities=33% Similarity=0.628 Sum_probs=10.5
Q ss_pred EecccccEEEEE
Q psy6259 184 VFPEKGSAVFWY 195 (227)
Q Consensus 184 v~P~~G~al~f~ 195 (227)
.+|++|+.++|.
T Consensus 62 YrP~r~D~Vv~~ 73 (102)
T 2pp6_A 62 VIPRRGDRVVLR 73 (102)
T ss_dssp CCCCTTCEEEET
T ss_pred cccCCCCEEEEc
Confidence 789999999984
No 66
>4aay_B AROB; oxidoreductase, rieske, iron sulfur, molybdopterin; HET: MGD; 2.70A {Rhizobium species}
Probab=25.82 E-value=78 Score=24.15 Aligned_cols=46 Identities=13% Similarity=0.128 Sum_probs=29.6
Q ss_pred EEeecCCCCCceeeeCCC----ceE-Eec---------ccccEEEEEecCCCCCCCCccccccCCCccC
Q psy6259 163 MFYLTDVELGGATIFPSL----NLT-VFP---------EKGSAVFWYNAHANTLLDYRMYHSGCPVALG 217 (227)
Q Consensus 163 liYLnd~~~GGeT~Fp~~----~~~-v~P---------~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G 217 (227)
+.-++|..+|+...|... .+. ++- ..|....|.| .+.|.++|+..|
T Consensus 54 v~~~~dL~~g~~~~v~~~~~~~pv~v~R~g~~~~~~r~~~G~v~A~~n---------~CpH~G~~L~~g 113 (175)
T 4aay_B 54 LANISELTLNEPLDVAYPDEDAAGVLLKLGTRVEGGVGPDGDIVGFST---------ICPHKGFPLSYS 113 (175)
T ss_dssp EEEGGGCBBTBCEEEESSSTTSEEEEEECSSCCTTCBTTTTCEEEEEC---------BCTTTCCBCEEE
T ss_pred EEEHHHCCCCCEEEEEECCCCCEEEEEEcccccccccCCCCEEEEEeC---------CCCCCCCCCccC
Confidence 455667666666555421 133 232 3688888887 699999999754
No 67
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=25.38 E-value=39 Score=27.42 Aligned_cols=27 Identities=7% Similarity=-0.039 Sum_probs=21.4
Q ss_pred eccCCcEEEEccCCCHHHHHHHHHHccC
Q psy6259 43 LYLDPRVVKIHDAIYDSEINRIIELSKG 70 (227)
Q Consensus 43 ls~~p~I~~~~~fls~~Ec~~li~~~~~ 70 (227)
+..+.+ +++++||+++||+++.+.++.
T Consensus 12 f~~dGy-vvl~~~l~~e~v~~l~~~~~~ 38 (291)
T 2opw_A 12 FQQDGF-LVLEGFLSAEECVAMQQRIGE 38 (291)
T ss_dssp HHHHSE-EEETTSSCHHHHHHHHHHHHH
T ss_pred HHhCCE-EEecCCCCHHHHHHHHHHHHH
Confidence 344556 599999999999999887753
No 68
>2zyl_A Possible oxidoreductase; KSHA, cholesterol, rieske; 2.30A {Mycobacterium tuberculosis}
Probab=24.84 E-value=98 Score=26.55 Aligned_cols=52 Identities=15% Similarity=0.053 Sum_probs=36.9
Q ss_pred eEEEEEEeecCCCCCceeeeCCC--ce-EEecccccEEEEEecCCCCCCCCccccccCCCccCe
Q psy6259 158 RLASFMFYLTDVELGGATIFPSL--NL-TVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGN 218 (227)
Q Consensus 158 R~~T~liYLnd~~~GGeT~Fp~~--~~-~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G~ 218 (227)
|.+..+...+++.+|.-..+.-. .+ -++-..|.+-.|.| .+.|.|+|+..|.
T Consensus 24 ~~W~~v~~~~el~~g~~~~~~~~g~~vvl~R~~~G~v~a~~n---------~CpHrga~L~~g~ 78 (386)
T 2zyl_A 24 RGWHCLGVAKDYLEGKPHGVEAFGTKLVVFADSHGDLKVLDG---------YCRHMGGDLSEGT 78 (386)
T ss_dssp SEEEEEEEGGGGCSSSCEEEEETTEEEEEEECTTSCEEEEES---------BCTTTCCBGGGSE
T ss_pred cceEEEEEHHHCCCCCeEEEEECCeEEEEEECCCCCEEEEcC---------cCCCCCCCCCCCc
Confidence 45677777888777655444433 23 35667888888888 6999999998763
No 69
>1g8k_B Arsenite oxidase; molybdopterin, [3Fe-4S] cluster, [2Fe-2S] rieske, oxidoreductase; HET: MGD; 1.64A {Alcaligenes faecalis} SCOP: b.33.1.1 PDB: 1g8j_B*
Probab=24.38 E-value=1.2e+02 Score=21.66 Aligned_cols=45 Identities=16% Similarity=0.172 Sum_probs=29.3
Q ss_pred EEeecCCCCCceeeeCC----CceE-Eecc---------cccEEEEEecCCCCCCCCccccccCCCcc
Q psy6259 163 MFYLTDVELGGATIFPS----LNLT-VFPE---------KGSAVFWYNAHANTLLDYRMYHSGCPVAL 216 (227)
Q Consensus 163 liYLnd~~~GGeT~Fp~----~~~~-v~P~---------~G~al~f~~~~~~g~~d~~~~H~g~pV~~ 216 (227)
+.-++|..+|+...|.. ..+. ++-. .|....|.| .+.|.++|+..
T Consensus 11 v~~~~dl~~g~~~~~~~~~~g~~v~v~r~~~~~~~~~~~~g~~~A~~n---------~CpH~g~~L~~ 69 (133)
T 1g8k_B 11 VSVAKNLAANEPVSFTYPDTSSPCVAVKLGAPVPGGVGPDDDIVAYSV---------LCTHMGCPTSY 69 (133)
T ss_dssp EEEGGGCCBTCCEEEECSSTTSEEEEEECSSCCTTCBTTTTCEEEEEC---------BCTTTCCBCEE
T ss_pred EEEHHHCCCCCeEEEEecCCCceEEEEEccccccccccCCCEEEEEeC---------cCCCCCCCCCc
Confidence 44577777776655532 2233 3432 788888887 59999999853
No 70
>3d89_A Rieske domain-containing protein; CAsp target, rieske ferredoxin, [2Fe-2S] cluster, protein ST initiative, PSI; 2.07A {Mus musculus}
Probab=23.97 E-value=27 Score=25.96 Aligned_cols=51 Identities=22% Similarity=0.225 Sum_probs=34.2
Q ss_pred eEEEEEEeecCCCCCceeeeCC--CceE-EecccccEEEEEecCCCCCCCCccccccCCCccCe
Q psy6259 158 RLASFMFYLTDVELGGATIFPS--LNLT-VFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGN 218 (227)
Q Consensus 158 R~~T~liYLnd~~~GGeT~Fp~--~~~~-v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G~ 218 (227)
+.+..+..++|..+|+...+.. ..+. ++ ..|.+..|.| .+.|.|+|+..|.
T Consensus 15 ~~W~~v~~~~el~~g~~~~~~~~g~~i~v~r-~~G~v~A~~n---------~CpH~g~~L~~G~ 68 (157)
T 3d89_A 15 YTSVCVGREEDIRKSERMTAVVHDREVVIFY-HKGEYHAMDI---------RCYHSGGPLHLGE 68 (157)
T ss_dssp CSCEEEEEHHHHHHHSEEEEEETTEEEEEEE-ETTEEEEEES---------BCTTTCCBGGGSE
T ss_pred CceEEEEEHHHCCCCCeEEEEECCEEEEEEE-ECCEEEEEeC---------CCCCCCCCCcCCE
Confidence 3456667777776655444432 2333 44 6888888887 6999999998874
No 71
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=23.53 E-value=45 Score=27.29 Aligned_cols=29 Identities=14% Similarity=0.095 Sum_probs=23.3
Q ss_pred ceEEecccccEEEEEecCCCCCCCCccccccCCCccC
Q psy6259 181 NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALG 217 (227)
Q Consensus 181 ~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G 217 (227)
.++.+=++|+++||.|. +++|...+-..+
T Consensus 233 ~~r~~W~~GDlviwDNr--------~~lH~a~~d~~~ 261 (277)
T 3pvj_A 233 SIRWRWQENDVAFWDNR--------VTQHFAVDDYRP 261 (277)
T ss_dssp EEEECCCTTCEEEEETT--------SEEEEECCCCTT
T ss_pred EEEEeeCCCCEEEEeCC--------ceeeeccCCCCC
Confidence 46788899999999996 689988765543
No 72
>2de6_A Terminal oxygenase component of carbazole; electron transfer complex, rieske non-heme iron oxygenase system, terminal oxygenase; 1.80A {Janthinobacterium} SCOP: b.33.1.2 d.129.3.3 PDB: 1ww9_A 2de5_A 2de7_A*
Probab=22.80 E-value=99 Score=26.48 Aligned_cols=52 Identities=15% Similarity=0.176 Sum_probs=35.7
Q ss_pred ceEEEEEEeecCCCCCceeeeCCC--ce-EEecccccEEEEEecCCCCCCCCccccccCCCccCe
Q psy6259 157 WRLASFMFYLTDVELGGATIFPSL--NL-TVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGN 218 (227)
Q Consensus 157 ~R~~T~liYLnd~~~GGeT~Fp~~--~~-~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G~ 218 (227)
.+.+..+...+++.+|.-..+.-. .+ -++ ..|.+-.|.| .+.|.|+|+..|.
T Consensus 26 ~~~W~~v~~~~el~~g~~~~~~~~g~~vvl~R-~~G~v~a~~n---------~CpHrga~L~~g~ 80 (392)
T 2de6_A 26 RNHWYPVMFSKEINEGEPKTLKLLGENLLVNR-IDGKLYCLKD---------RCLHRGVQLSVKV 80 (392)
T ss_dssp SSEEEEEEEGGGSCBTCCEEEEETTEEEEEEE-ETTEEEEEES---------SCTTTCCCGGGGC
T ss_pred ccccEEEEEHHHCCCCCeEEEEECCEEEEEEE-eCCEEEEEeC---------cCCCCCCCCcCCc
Confidence 345677777888776554444322 33 345 6888888888 6999999987763
No 73
>1z01_A 2-OXO-1,2-dihydroquinoline 8-monooxygenase, oxygenase component; rieske center, oxygen binding/activation, substrate bound complex; 1.80A {Pseudomonas putida} SCOP: b.33.1.2 d.129.3.3 PDB: 1z02_A 1z03_A*
Probab=22.57 E-value=1.1e+02 Score=26.81 Aligned_cols=51 Identities=8% Similarity=0.010 Sum_probs=33.6
Q ss_pred eEEEEEEeecCCCCCceeeeCCC--ceE-EecccccEEEEEecCCCCCCCCccccccCCCccCe
Q psy6259 158 RLASFMFYLTDVELGGATIFPSL--NLT-VFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGN 218 (227)
Q Consensus 158 R~~T~liYLnd~~~GGeT~Fp~~--~~~-v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G~ 218 (227)
+.+..+...+++.+|.-..+.-. .+. ++ ..|.+..|.| .+.|.|+|+..|.
T Consensus 42 ~~W~~v~~~~el~~g~~~~~~~~g~~vvl~r-~~G~v~a~~n---------~CpHrga~L~~g~ 95 (446)
T 1z01_A 42 NHWYPALFTHELEEDQVQGIQICGVPIVLRR-VNGKVFALKD---------QCLHRGVRLSEKP 95 (446)
T ss_dssp SEEEEEEEGGGSCBTCEEEEEETTEEEEEEE-ETTEEEEEES---------SCTTTCCCGGGSC
T ss_pred hceEEEEEHHHCCCCCeEEEEECCEEEEEEE-eCCEEEEEeC---------cCCCCcCCCCCCc
Confidence 34556666677665443333222 233 45 7899999988 6999999998774
No 74
>3gke_A DDMC; rieske cluster, non-heme mononuclear iron, oxygenase, oxidoreductase; 1.75A {Stenotrophomonas maltophilia} PDB: 3gb4_A 3gl0_A* 3gl2_A* 3gob_A* 3gte_A 3gts_A*
Probab=22.09 E-value=80 Score=26.69 Aligned_cols=51 Identities=12% Similarity=-0.065 Sum_probs=34.4
Q ss_pred eEEEEEEeecCCCCCceeeeCCC--ce-EEecccccEEEEEecCCCCCCCCccccccCCCccCe
Q psy6259 158 RLASFMFYLTDVELGGATIFPSL--NL-TVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVALGN 218 (227)
Q Consensus 158 R~~T~liYLnd~~~GGeT~Fp~~--~~-~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~G~ 218 (227)
+.+..+...+++ .|.-..+.-. .+ -++-..|.+..|.| .+.|.|+|+..|.
T Consensus 7 ~~W~~v~~~~el-~g~~~~~~~~g~~vvv~R~~~G~v~a~~n---------~CpHrg~~L~~G~ 60 (349)
T 3gke_A 7 NAWYVAALPEEL-SEKPLGRTILDTPLALYRQPDGVVAALLD---------ICPHRFAPLSDGI 60 (349)
T ss_dssp SSCEEEECGGGC-CSSCEEEEETTEEEEEEECTTSCEEEEES---------SCTTTCCCGGGCE
T ss_pred cccEEEEEHHHC-CCCeEEEEECCEEEEEEEcCCCcEEEEeC---------cCCCCCcCCccCC
Confidence 345566667777 5554444322 23 35557899999988 6999999998773
No 75
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=21.92 E-value=51 Score=27.42 Aligned_cols=28 Identities=14% Similarity=0.087 Sum_probs=22.1
Q ss_pred ceEEecccccEEEEEecCCCCCCCCccccccCCCcc
Q psy6259 181 NLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVAL 216 (227)
Q Consensus 181 ~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~ 216 (227)
.++.+=++|+++||.|. +++|....-..
T Consensus 237 ~~r~~W~~GDlviwDNr--------~~lH~a~~d~~ 264 (301)
T 3r1j_A 237 TVRWSWAPGDVAMWDNR--------ATQHRAIDDYD 264 (301)
T ss_dssp EEEECCCTTCEEEEETT--------SEEEEECCCST
T ss_pred EEEeeeCCCCEEEEEcC--------ceeecccCCCC
Confidence 46778899999999996 68888765443
No 76
>1wgk_A Riken cDNA 2900073H19 protein; THis domain, ubiqutin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.3.3 PDB: 1xo3_A
Probab=20.82 E-value=1.2e+02 Score=21.25 Aligned_cols=36 Identities=8% Similarity=0.213 Sum_probs=23.2
Q ss_pred EEEeecCCC----CCceeeeCCCceEEecccccEEEEEecCCCCCCCCccccccCCCcc
Q psy6259 162 FMFYLTDVE----LGGATIFPSLNLTVFPEKGSAVFWYNAHANTLLDYRMYHSGCPVAL 216 (227)
Q Consensus 162 ~liYLnd~~----~GGeT~Fp~~~~~v~P~~G~al~f~~~~~~g~~d~~~~H~g~pV~~ 216 (227)
+++|.|+.. .|-+|.. +.|+.|.|-. .+|.|+..-+
T Consensus 74 i~VlVN~~di~~l~gldt~L---------~dGDeV~iip----------~vaGG~~~~~ 113 (114)
T 1wgk_A 74 ILVLINDADWELLGELDYQL---------QDQDSILFIS----------TLHGGSGPSS 113 (114)
T ss_dssp EEEEESSSBHHHHCTTTCBC---------CSSEEEEEEE----------CSCCCCCSCC
T ss_pred eEEEECCeeeeccCCcCcCC---------CCCCEEEEeC----------CCCCCCCcCC
Confidence 689999864 3445544 4566666665 6788776543
Done!