Your job contains 1 sequence.
>psy6263
MPEKIAVPDKDEKVTKGKGEKNPDEMSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMR
DLIRTSTTSMTSVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQDNVEQE
CLKYCLMAKQKDVGDWGHEYVRQLEAEIAEEWATNKYEKPQLLELIEDIIQFDMKHNAEI
QACDLLMEIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEPERSVITNGVLNNYLKFKEY
PRALTLALQLNDEPSVLKIFQLCEDPVVRKQLAYMAGRQQITIELPDEMPDKNDLQIIMT
NSHINDHFHSLARELDIMEPKTPEEVYKTWLENIVLRPTYNLDVPVDSARHNLASTFVNA
FVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYLYTSED
YIKAGALLALGIVNCGVRNECDPALALLSDYVLNDSITLRIGAVLGLGLAYAGTKRQEVV
TLLLPVLTDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSELQDGHYSRF
LPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLVVQEFLHVCS
EHYTPTTSSAKEETSATGTAASATAGGSTESTPAAAANDKKEKKDKEKEKDLSSMQAVAA
LGVAVVALGEEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYS
HDLDEEVAHNAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKG
TVSLSPFHTDRQILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAMYPRWLVTLD
ENQEPVSVSVRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDDYVPLTPVM
EGFVILRKKDKDD
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy6263
(913 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040426-1480 - symbol:psmd2 "proteasome (pro... 1583 4.5e-255 2
UNIPROTKB|Q5R9I6 - symbol:PSMD2 "26S proteasome non-ATPas... 1566 4.6e-253 2
UNIPROTKB|Q13200 - symbol:PSMD2 "26S proteasome non-ATPas... 1565 5.9e-253 2
RGD|1305752 - symbol:Psmd2 "proteasome (prosome, macropai... 1566 7.5e-253 2
UNIPROTKB|P56701 - symbol:PSMD2 "26S proteasome non-ATPas... 1564 7.5e-253 2
UNIPROTKB|I3LEW5 - symbol:PSMD2 "Uncharacterized protein"... 1564 7.5e-253 2
MGI|MGI:1096584 - symbol:Psmd2 "proteasome (prosome, macr... 1562 1.2e-252 2
UNIPROTKB|E2RCP9 - symbol:PSMD2 "Uncharacterized protein"... 1559 2.5e-252 2
FB|FBgn0028695 - symbol:Rpn1 "Regulatory particle non-ATP... 1439 7.9e-238 2
UNIPROTKB|E7EW34 - symbol:PSMD2 "26S proteasome non-ATPas... 1342 2.3e-229 2
UNIPROTKB|E9PCS3 - symbol:PSMD2 "26S proteasome non-ATPas... 1248 2.0e-219 2
WB|WBGene00004458 - symbol:rpn-1 species:6239 "Caenorhabd... 1307 1.7e-213 2
TAIR|locus:2046016 - symbol:RPN1A "26S proteasome regulat... 1274 2.3e-207 2
TAIR|locus:2121358 - symbol:RPN1B "26S proteasome regulat... 1239 4.4e-202 2
DICTYBASE|DDB_G0293752 - symbol:psmD2 "26S proteasome non... 1157 1.7e-191 2
ASPGD|ASPL0000062698 - symbol:AN10020 species:162425 "Eme... 1090 6.5e-188 2
POMBASE|SPBP19A11.03c - symbol:mts4 "19S proteasome regul... 1124 3.6e-187 2
UNIPROTKB|F1P4P8 - symbol:PSMD2 "Uncharacterized protein"... 1564 3.7e-183 2
CGD|CAL0006334 - symbol:RPN1 species:5476 "Candida albica... 999 2.0e-171 2
UNIPROTKB|E1BX02 - symbol:PSMD2 "Uncharacterized protein"... 1564 5.6e-167 2
SGD|S000001069 - symbol:RPN1 "Base subunit of the 19S reg... 750 1.4e-160 3
GENEDB_PFALCIPARUM|PFB0260w - symbol:PFB0260w "proteasome... 681 1.6e-149 3
UNIPROTKB|O96153 - symbol:PFB0260w "Proteasome 26S regula... 681 1.6e-149 3
UNIPROTKB|H9KZ05 - symbol:Gga.48069 "Uncharacterized prot... 600 1.9e-58 1
UNIPROTKB|H7C1H2 - symbol:PSMD2 "26S proteasome non-ATPas... 360 1.0e-53 2
UNIPROTKB|C9JPC0 - symbol:PSMD2 "26S proteasome non-ATPas... 311 2.8e-37 2
UNIPROTKB|F1P4Q5 - symbol:PSMD2 "Uncharacterized protein"... 345 2.2e-30 1
UNIPROTKB|H7C2Q3 - symbol:PSMD2 "26S proteasome non-ATPas... 243 2.0e-19 1
CGD|CAL0003585 - symbol:RPN2 species:5476 "Candida albica... 169 1.0e-09 2
DICTYBASE|DDB_G0287953 - symbol:psmD1 "26S proteasome reg... 146 1.2e-07 3
POMBASE|SPBC17D11.07c - symbol:rpn2 "19S proteasome regul... 152 1.4e-07 3
TAIR|locus:2046402 - symbol:AT2G32730 species:3702 "Arabi... 148 2.5e-07 4
TAIR|locus:2128823 - symbol:AT4G08140 "AT4G08140" species... 125 8.3e-07 1
TAIR|locus:2010672 - symbol:AT1G04810 species:3702 "Arabi... 136 1.2e-06 3
FB|FBgn0028692 - symbol:Rpn2 "Regulatory particle non-ATP... 148 1.4e-06 3
ASPGD|ASPL0000047917 - symbol:AN1700 species:162425 "Emer... 137 2.4e-06 3
UNIPROTKB|J9P4R4 - symbol:PSMD1 "Uncharacterized protein"... 141 4.8e-06 3
UNIPROTKB|F1PX57 - symbol:PSMD1 "Uncharacterized protein"... 141 1.2e-05 3
UNIPROTKB|F1NUT6 - symbol:PSMD1 "26S proteasome non-ATPas... 141 1.2e-05 3
UNIPROTKB|E1C5P3 - symbol:PSMD1 "26S proteasome non-ATPas... 141 1.2e-05 3
UNIPROTKB|A7MBA2 - symbol:PSMD1 "Uncharacterized protein"... 141 1.8e-05 4
ZFIN|ZDB-GENE-040426-810 - symbol:psmd1 "proteasome (pros... 140 1.9e-05 3
UNIPROTKB|Q99460 - symbol:PSMD1 "26S proteasome non-ATPas... 141 2.3e-05 3
UNIPROTKB|Q5R5S4 - symbol:PSMD1 "26S proteasome non-ATPas... 141 2.3e-05 3
UNIPROTKB|Q5F418 - symbol:PSMD1 "26S proteasome non-ATPas... 141 2.4e-05 3
MGI|MGI:1917497 - symbol:Psmd1 "proteasome (prosome, macr... 141 2.9e-05 4
UNIPROTKB|F1LRN6 - symbol:Psmd1 "26S proteasome non-ATPas... 141 3.5e-05 4
UNIPROTKB|G3V8B6 - symbol:Psmd1 "26S proteasome non-ATPas... 141 3.6e-05 4
SGD|S000001337 - symbol:RPN2 "Subunit of the 26S proteaso... 132 4.4e-05 2
RGD|621669 - symbol:Psmd1 "proteasome (prosome, macropain... 137 9.2e-05 4
>ZFIN|ZDB-GENE-040426-1480 [details] [associations]
symbol:psmd2 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 2" species:7955 "Danio rerio" [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] InterPro:IPR016024 InterPro:IPR016643
PIRSF:PIRSF015965 INTERPRO:IPR002015 ZFIN:ZDB-GENE-040426-1480
GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 Pfam:PF01851 CTD:5708 HOGENOM:HOG000176022
HOVERGEN:HBG001842 KO:K03028 PANTHER:PTHR10943:SF1 EMBL:BC056516
IPI:IPI00507875 RefSeq:NP_956840.1 UniGene:Dr.78209
ProteinModelPortal:Q6PHK7 PRIDE:Q6PHK7 GeneID:393518
KEGG:dre:393518 InParanoid:Q6PHK7 NextBio:20814544 Bgee:Q6PHK7
Uniprot:Q6PHK7
Length = 897
Score = 1583 (562.3 bits), Expect = 4.5e-255, Sum P(2) = 4.5e-255
Identities = 318/600 (53%), Positives = 422/600 (70%)
Query: 9 DKDEKVT-KGKGEKNPDEMSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMRDLIRXXX 67
+KD++ K K +K E+SEEDK+LQE+L MLVE++ D LY PALE +R IR
Sbjct: 17 EKDKQPAGKDKDKKEEQELSEEDKQLQEELEMLVERLGEKDTSLYRPALEELRRQIRSST 76
Query: 68 XXXXXVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQDNVEQECLKYCLM 127
VP PLKFLR HY LK+ + MT + K ++SVLAM+ N E+ECLKY L+
Sbjct: 77 TSMTSVPKPLKFLRPHYAKLKDIYQNMTAGENKHFCADVVSVLAMTMSN-ERECLKYRLL 135
Query: 128 AKQKDVGDWGHEYVRQLEAEIAEEWAT----NKYEKPQLLELIEDIIQFDMKHNAEIQAC 183
Q+++ WGHEYVR L E+A+EW +K ++ LL+L+++I+ ++M HNAE +AC
Sbjct: 136 GSQEELASWGHEYVRHLAGEVAKEWQEIEEGDKAQQEVLLKLVKEIVPYNMAHNAEHEAC 195
Query: 184 DLLMEIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEPERSVITNGVLNNYLKFKEYPRA 243
DLLMEI+ L++LD ++D Y +VCLYL++C YV EPE S + LN + KF YP A
Sbjct: 196 DLLMEIERLDMLDSYIDENAYAKVCLYLTSCVSYVPEPENSALLKCALNIFRKFNRYPEA 255
Query: 244 LTLALQLNDEPSVLKIFQLCEDPVVRKQLAYMAGRQQITIELPDEMPDKNDLQIIMTNSH 303
L LAL LND V IF C+D V++KQ+A+M GR + +EL +++ D DL IM+N
Sbjct: 256 LRLALMLNDVELVENIFTSCKDIVIQKQMAFMLGRHGMFLELNEDVEDYEDLTEIMSNVQ 315
Query: 304 INDHFHSLARELDIMEPKTPEEVYKTWLENIVLRPTYNLDVPVDSARHNLASTFVNAFVN 363
+N +F +LARELDIMEPK P+++YKT LEN + + VDSAR NLAS+FVN FVN
Sbjct: 316 LNSNFLALARELDIMEPKVPDDIYKTHLENNRFGGSGS---QVDSARMNLASSFVNGFVN 372
Query: 364 AGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYLYTSEDYIK 423
A F +DKL++ EDGNKW+YKNK HGMLSAAASLG+I LWDVDGGLT IDKYLY+SEDYIK
Sbjct: 373 AAFGQDKLLT-EDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSEDYIK 431
Query: 424 AGALLALGIVNCGVRNECDPALALLSDYVLNDSITLRIXXXXXXXXXXXXTKRQEVVTLL 483
+GALLA GIVN GVRNECDPALALLSDYVL++S +RI + R++V++LL
Sbjct: 432 SGALLACGIVNSGVRNECDPALALLSDYVLHNSNIMRIGAIFGLGLAYAGSNREDVLSLL 491
Query: 484 LPVLTDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSELQDGHYSRFLPL 543
LPV+ D KS+ EV A+A +I VG+ +V S ILQT++E EL+D +R+LPL
Sbjct: 492 LPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQTIMEKSEQELKDT-CARWLPL 550
Query: 544 ALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLVVQEFLHVCSEHY 603
L + +LGK +AI+TTLAAL+V+P+PFRS ++ +CAYAGSG+VL VQ+ LH+CSEH+
Sbjct: 551 GLGLNHLGKGEAIETTLAALQVVPEPFRSFGNTLVDVCAYAGSGNVLKVQQLLHICSEHF 610
Score = 896 (320.5 bits), Expect = 4.5e-255, Sum P(2) = 4.5e-255
Identities = 170/244 (69%), Positives = 206/244 (84%)
Query: 670 EEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAH 729
EEIGSEM+ R FG L RYGE T+RRAVPLA+AL S+SNP LN++D L+K+SHD D EV+H
Sbjct: 653 EEIGSEMALRTFGHLLRYGESTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSH 712
Query: 730 NAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHT 789
N+IF+MGLVG+GTNNARLA MLRQLAQYH K+ +LFMVR+AQGLTH+GKGT++L P+H+
Sbjct: 713 NSIFAMGLVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHS 772
Query: 790 DRQILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAMYPRWLVTLDENQEPVSVS 849
DRQ+++ VA+AGLL VL SFLD KN+ILGKSHY+LY LV AM PR LVT DE P+ VS
Sbjct: 773 DRQLMSQVAVAGLLTVLVSFLDVKNLILGKSHYILYGLVAAMQPRMLVTFDEELRPLPVS 832
Query: 850 VRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDDYVPLTPVMEGFVILRKK 909
VRVGQAVDV+G+AG PK I G THTTPVLLA GERAELAT++++P+TP++EGFVILRK
Sbjct: 833 VRVGQAVDVVGQAGKPKAITGFQTHTTPVLLAHGERAELATEEFIPVTPILEGFVILRKN 892
Query: 910 DKDD 913
D
Sbjct: 893 PNYD 896
Score = 37 (18.1 bits), Expect = 1.1e-91, Sum P(2) = 1.1e-91
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 9 DKDEKVTKGKGEKNPDEM 26
DKD+K K K +K +M
Sbjct: 618 DKDKKDKKDKDKKESADM 635
>UNIPROTKB|Q5R9I6 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9601 "Pongo abelii" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR016024 InterPro:IPR016643
PIRSF:PIRSF015965 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0042176 GO:GO:0022624 Pfam:PF01851 CTD:5708
HOVERGEN:HBG001842 KO:K03028 PANTHER:PTHR10943:SF1 EMBL:CR859401
EMBL:CR859332 RefSeq:NP_001125887.1 UniGene:Pab.19003
ProteinModelPortal:Q5R9I6 PRIDE:Q5R9I6 GeneID:100172819
KEGG:pon:100172819 Uniprot:Q5R9I6
Length = 908
Score = 1566 (556.3 bits), Expect = 4.6e-253, Sum P(2) = 4.6e-253
Identities = 316/596 (53%), Positives = 418/596 (70%)
Query: 13 KVTKGKGEKNPD-EMSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMRDLIRXXXXXXX 71
K + G+K+ + E+SEEDK+LQ++L MLVE++ D LY PALE +R IR
Sbjct: 31 KERRDAGDKDKEQELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMT 90
Query: 72 XVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQDNVEQECLKYCLMAKQK 131
VP PLKFLR HYG LKE E M + K+ IISVLAM+ E+ECLKY L+ Q+
Sbjct: 91 SVPKPLKFLRPHYGKLKEIYENMAPGENKRFAADIISVLAMTMSG-ERECLKYRLVGSQE 149
Query: 132 DVGDWGHEYVRQLEAEIAEEWA----TNKYEKPQLLELIEDIIQFDMKHNAEIQACDLLM 187
++ WGHEYVR L E+A+EW K ++ LL L+++II ++M HNAE +ACDLLM
Sbjct: 150 ELASWGHEYVRHLAGEVAKEWQELDDAEKVQREPLLTLVKEIIPYNMAHNAEHEACDLLM 209
Query: 188 EIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEPERSVITNGVLNNYLKFKEYPRALTLA 247
EI+ +++L+K +D Y +VCLYL++C YV EPE S + L + KF +P AL LA
Sbjct: 210 EIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLA 269
Query: 248 LQLNDEPSVLKIFQLCEDPVVRKQLAYMAGRQQITIELPDEMPDKNDLQIIMTNSHINDH 307
L LND V IF C+D VV+KQ+A+M GR + +EL +++ + DL IM+N +N +
Sbjct: 270 LMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLELSEDVEEYEDLTEIMSNVQLNSN 329
Query: 308 FHSLARELDIMEPKTPEEVYKTWLENIVLRPTYNLDVPVDSARHNLASTFVNAFVNAGFS 367
F +LARELDIMEPK P+++YKT LEN + + VDSAR NLAS+FVN FVNA F
Sbjct: 330 FLALARELDIMEPKVPDDIYKTHLENNRFGGSGS---QVDSARMNLASSFVNGFVNAAFG 386
Query: 368 RDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYLYTSEDYIKAGAL 427
+DKL++ +DGNKW+YKNK HGMLSAAASLG+I LWDVDGGLT IDKYLY+SEDYIK+GAL
Sbjct: 387 QDKLLT-DDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGAL 445
Query: 428 LALGIVNCGVRNECDPALALLSDYVLNDSITLRIXXXXXXXXXXXXTKRQEVVTLLLPVL 487
LA GIVN GVRNECDPALALLSDYVL++S T+R+ + R++V+TLLLPV+
Sbjct: 446 LACGIVNSGVRNECDPALALLSDYVLHNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVM 505
Query: 488 TDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSELQDGHYSRFLPLALAI 547
D KS+ EV A+A +I VG+ +V S ILQT++E +EL+D Y+R+LPL L +
Sbjct: 506 GDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQTIMEKSETELKDT-YARWLPLGLGL 564
Query: 548 TYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLVVQEFLHVCSEHY 603
+LGK +AI+ LAALEV+ +PFRS A ++ +CAYAGSG+VL VQ+ LH+CSEH+
Sbjct: 565 NHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHF 620
Score = 894 (319.8 bits), Expect = 4.6e-253, Sum P(2) = 4.6e-253
Identities = 169/244 (69%), Positives = 208/244 (85%)
Query: 670 EEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAH 729
EEIG+EM+ R FG L RYGEPT+RRAVPLA+AL S+SNP LN++D L+K+SHD D EV++
Sbjct: 664 EEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSY 723
Query: 730 NAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHT 789
N+IF+MG+VG+GTNNARLA MLRQLAQYH K+ +LFMVR+AQGLTH+GKGT++L P+H+
Sbjct: 724 NSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHS 783
Query: 790 DRQILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAMYPRWLVTLDENQEPVSVS 849
DRQ+++ VA+AGLL VL SFLD +NIILGKSHY+LY LV AM PR LVT DE P+ VS
Sbjct: 784 DRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVS 843
Query: 850 VRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDDYVPLTPVMEGFVILRKK 909
VRVGQAVDV+G+AG PKTI G THTTPVLLA GERAELAT++++P+TP++EGFVILRK
Sbjct: 844 VRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRKN 903
Query: 910 DKDD 913
D
Sbjct: 904 PNYD 907
Score = 37 (18.1 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 9 DKDEKVTKGKGEKN-PDEM 26
DKD+K K K +K P +M
Sbjct: 628 DKDKKEKKDKDKKEAPADM 646
>UNIPROTKB|Q13200 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9606 "Homo sapiens" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=TAS]
[GO:0005838 "proteasome regulatory particle" evidence=TAS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR016024 InterPro:IPR016643
PIRSF:PIRSF015965 INTERPRO:IPR002015 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0030234 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
SUPFAM:SSF48371 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0051436 GO:GO:0000216
GO:GO:0042176 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 DrugBank:DB00188
GO:GO:0005838 Pfam:PF01851 CTD:5708 eggNOG:COG5110
HOVERGEN:HBG001842 KO:K03028 OMA:IAQGLTH OrthoDB:EOG483D3X
PANTHER:PTHR10943:SF1 EMBL:D78151 EMBL:BT009736 EMBL:BC002368
EMBL:BC002997 EMBL:BC007897 EMBL:U12596 EMBL:X86446 IPI:IPI00012268
RefSeq:NP_002799.3 UniGene:Hs.518464 ProteinModelPortal:Q13200
SMR:Q13200 IntAct:Q13200 MINT:MINT-1142723 STRING:Q13200
PhosphoSite:Q13200 DMDM:6174930 PaxDb:Q13200 PeptideAtlas:Q13200
PRIDE:Q13200 DNASU:5708 Ensembl:ENST00000310118 GeneID:5708
KEGG:hsa:5708 UCSC:uc003fnn.1 GeneCards:GC03P184016 HGNC:HGNC:9559
HPA:HPA045192 MIM:606223 neXtProt:NX_Q13200 PharmGKB:PA33905
InParanoid:Q13200 PhylomeDB:Q13200 ChiTaRS:PSMD2 GenomeRNAi:5708
NextBio:22178 ArrayExpress:Q13200 Bgee:Q13200 CleanEx:HS_PSMD2
Genevestigator:Q13200 GermOnline:ENSG00000175166 Uniprot:Q13200
Length = 908
Score = 1565 (556.0 bits), Expect = 5.9e-253, Sum P(2) = 5.9e-253
Identities = 315/596 (52%), Positives = 418/596 (70%)
Query: 13 KVTKGKGEKNPD-EMSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMRDLIRXXXXXXX 71
K + G+K+ + E+SEEDK+LQ++L MLVE++ D LY PALE +R IR
Sbjct: 31 KERRDAGDKDKEQELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMT 90
Query: 72 XVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQDNVEQECLKYCLMAKQK 131
VP PLKFLR HYG LKE E M + K+ IISVLAM+ E+ECLKY L+ Q+
Sbjct: 91 SVPKPLKFLRPHYGKLKEIYENMAPGENKRFAADIISVLAMTMSG-ERECLKYRLVGSQE 149
Query: 132 DVGDWGHEYVRQLEAEIAEEWA----TNKYEKPQLLELIEDIIQFDMKHNAEIQACDLLM 187
++ WGHEYVR L E+A+EW K ++ LL L+++I+ ++M HNAE +ACDLLM
Sbjct: 150 ELASWGHEYVRHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAEHEACDLLM 209
Query: 188 EIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEPERSVITNGVLNNYLKFKEYPRALTLA 247
EI+ +++L+K +D Y +VCLYL++C YV EPE S + L + KF +P AL LA
Sbjct: 210 EIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLA 269
Query: 248 LQLNDEPSVLKIFQLCEDPVVRKQLAYMAGRQQITIELPDEMPDKNDLQIIMTNSHINDH 307
L LND V IF C+D VV+KQ+A+M GR + +EL +++ + DL IM+N +N +
Sbjct: 270 LMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLELSEDVEEYEDLTEIMSNVQLNSN 329
Query: 308 FHSLARELDIMEPKTPEEVYKTWLENIVLRPTYNLDVPVDSARHNLASTFVNAFVNAGFS 367
F +LARELDIMEPK P+++YKT LEN + + VDSAR NLAS+FVN FVNA F
Sbjct: 330 FLALARELDIMEPKVPDDIYKTHLENNRFGGSGS---QVDSARMNLASSFVNGFVNAAFG 386
Query: 368 RDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYLYTSEDYIKAGAL 427
+DKL++ +DGNKW+YKNK HGMLSAAASLG+I LWDVDGGLT IDKYLY+SEDYIK+GAL
Sbjct: 387 QDKLLT-DDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGAL 445
Query: 428 LALGIVNCGVRNECDPALALLSDYVLNDSITLRIXXXXXXXXXXXXTKRQEVVTLLLPVL 487
LA GIVN GVRNECDPALALLSDYVL++S T+R+ + R++V+TLLLPV+
Sbjct: 446 LACGIVNSGVRNECDPALALLSDYVLHNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVM 505
Query: 488 TDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSELQDGHYSRFLPLALAI 547
D KS+ EV A+A +I VG+ +V S ILQT++E +EL+D Y+R+LPL L +
Sbjct: 506 GDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQTIMEKSETELKDT-YARWLPLGLGL 564
Query: 548 TYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLVVQEFLHVCSEHY 603
+LGK +AI+ LAALEV+ +PFRS A ++ +CAYAGSG+VL VQ+ LH+CSEH+
Sbjct: 565 NHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHF 620
Score = 894 (319.8 bits), Expect = 5.9e-253, Sum P(2) = 5.9e-253
Identities = 169/244 (69%), Positives = 208/244 (85%)
Query: 670 EEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAH 729
EEIG+EM+ R FG L RYGEPT+RRAVPLA+AL S+SNP LN++D L+K+SHD D EV++
Sbjct: 664 EEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSY 723
Query: 730 NAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHT 789
N+IF+MG+VG+GTNNARLA MLRQLAQYH K+ +LFMVR+AQGLTH+GKGT++L P+H+
Sbjct: 724 NSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHS 783
Query: 790 DRQILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAMYPRWLVTLDENQEPVSVS 849
DRQ+++ VA+AGLL VL SFLD +NIILGKSHY+LY LV AM PR LVT DE P+ VS
Sbjct: 784 DRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVS 843
Query: 850 VRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDDYVPLTPVMEGFVILRKK 909
VRVGQAVDV+G+AG PKTI G THTTPVLLA GERAELAT++++P+TP++EGFVILRK
Sbjct: 844 VRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRKN 903
Query: 910 DKDD 913
D
Sbjct: 904 PNYD 907
Score = 37 (18.1 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 9 DKDEKVTKGKGEKN-PDEM 26
DKD+K K K +K P +M
Sbjct: 628 DKDKKEKKDKDKKEAPADM 646
>RGD|1305752 [details] [associations]
symbol:Psmd2 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 2" species:10116 "Rattus norvegicus" [GO:0022624
"proteasome accessory complex" evidence=ISO;ISS] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 RGD:1305752 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 Pfam:PF01851 CTD:5708 eggNOG:COG5110
GeneTree:ENSGT00550000074983 HOGENOM:HOG000176022
HOVERGEN:HBG001842 KO:K03028 OMA:IAQGLTH OrthoDB:EOG483D3X
PANTHER:PTHR10943:SF1 EMBL:BC099135 IPI:IPI00370456
RefSeq:NP_001026809.1 UniGene:Rn.29909 IntAct:Q4FZT9 STRING:Q4FZT9
PhosphoSite:Q4FZT9 PRIDE:Q4FZT9 Ensembl:ENSRNOT00000002358
GeneID:287984 KEGG:rno:287984 InParanoid:Q4FZT9 NextBio:627355
Genevestigator:Q4FZT9 Uniprot:Q4FZT9
Length = 908
Score = 1566 (556.3 bits), Expect = 7.5e-253, Sum P(2) = 7.5e-253
Identities = 322/612 (52%), Positives = 423/612 (69%)
Query: 2 PEKIAVPDKDEKVTKGK-----GEKNPD-EMSEEDKRLQEDLNMLVEKIKGSDKHLYLPA 55
P A DEK + GK GEK+ + E+SEEDK+LQ++L MLVE++ D LY PA
Sbjct: 16 PSATAPSGADEK-SSGKERRDAGEKDKEQELSEEDKQLQDELEMLVERLGEKDTSLYRPA 74
Query: 56 LESMRDLIRXXXXXXXXVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQD 115
LE +R IR VP PLKFLR HYG LKE E M + K IISVLAM+
Sbjct: 75 LEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKCFAADIISVLAMTMS 134
Query: 116 NVEQECLKYCLMAKQKDVGDWGHEYVRQLEAEIAEEWA----TNKYEKPQLLELIEDIIQ 171
E+ECLKY L+ Q+++ WGHEYVR L E+A+EW K ++ LL L+++I+
Sbjct: 135 G-ERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQELDDAEKAQREPLLTLVKEIVP 193
Query: 172 FDMKHNAEIQACDLLMEIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEPERSVITNGVL 231
++M HNAE +ACDLLMEI+ +++L+K +D Y +VCLYL++C YV EPE S + L
Sbjct: 194 YNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYSKVCLYLTSCVNYVPEPENSALLRCAL 253
Query: 232 NNYLKFKEYPRALTLALQLNDEPSVLKIFQLCEDPVVRKQLAYMAGRQQITIELPDEMPD 291
+ KF +P AL LAL LND V IF C+D VV+KQ+A+M GR + +EL +++ +
Sbjct: 254 GVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLELSEDVEE 313
Query: 292 KNDLQIIMTNSHINDHFHSLARELDIMEPKTPEEVYKTWLENIVLRPTYNLDVPVDSARH 351
DL IM+N +N +F +LARELDIMEPK P+++YKT LEN + + VDSAR
Sbjct: 314 YEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGGSGS---QVDSARM 370
Query: 352 NLASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPI 411
NLAS+FVN FVNA F +DKL++ +DGNKW+YKNK HGMLSAAASLG+I LWDVDGGLT I
Sbjct: 371 NLASSFVNGFVNAAFGQDKLLT-DDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQI 429
Query: 412 DKYLYTSEDYIKAGALLALGIVNCGVRNECDPALALLSDYVLNDSITLRIXXXXXXXXXX 471
DKYLY+SEDYIK+GALLA GIVN GVRNECDPALALLSDYVL++S T+R+
Sbjct: 430 DKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVLHNSNTMRLGSIFGLGLAY 489
Query: 472 XXTKRQEVVTLLLPVLTDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSE 531
+ R++V+TLLLPV+ D KS+ EV A+A +I VG+ +V S ILQT++E +E
Sbjct: 490 AGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQTIMEKSETE 549
Query: 532 LQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLV 591
L+D Y+R+LPL L + +LGK +AI+ LAALEV+ +PFRS A ++ +CAYAGSG+VL
Sbjct: 550 LKDT-YARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLK 608
Query: 592 VQEFLHVCSEHY 603
VQ+ LH+CSEH+
Sbjct: 609 VQQLLHICSEHF 620
Score = 892 (319.1 bits), Expect = 7.5e-253, Sum P(2) = 7.5e-253
Identities = 168/239 (70%), Positives = 207/239 (86%)
Query: 670 EEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAH 729
EEIG+EM+ R FG L RYGEPT+RRAVPLA+AL S+SNP LN++D L+K+SHD D EV++
Sbjct: 664 EEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSY 723
Query: 730 NAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHT 789
N+IF+MG+VG+GTNNARLA MLRQLAQYH K+ +LFMVR+AQGLTH+GKGT++L P+H+
Sbjct: 724 NSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHS 783
Query: 790 DRQILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAMYPRWLVTLDENQEPVSVS 849
DRQ+++ VA+AGLL VL SFLD +NIILGKSHY+LY LV AM PR LVT DE P+ VS
Sbjct: 784 DRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVS 843
Query: 850 VRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDDYVPLTPVMEGFVILRK 908
VRVGQAVDV+G+AG PKTI G THTTPVLLA GERAELAT++++P+TP++EGFVILRK
Sbjct: 844 VRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRK 902
Score = 37 (18.1 bits), Expect = 3.0e-91, Sum P(2) = 3.0e-91
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 9 DKDEKVTKGKGEKN-PDEM 26
DKD+K K K +K P +M
Sbjct: 628 DKDKKEKKDKDKKEAPADM 646
>UNIPROTKB|P56701 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016643
PIRSF:PIRSF015965 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0042176 GO:GO:0022624 Pfam:PF01851
EMBL:BT030686 EMBL:BC105524 IPI:IPI00710615 RefSeq:NP_001094667.1
UniGene:Bt.20443 STRING:P56701 PRIDE:P56701
Ensembl:ENSBTAT00000007436 GeneID:539784 KEGG:bta:539784 CTD:5708
eggNOG:COG5110 GeneTree:ENSGT00550000074983 HOGENOM:HOG000176022
HOVERGEN:HBG001842 InParanoid:P56701 KO:K03028 OMA:IAQGLTH
OrthoDB:EOG483D3X NextBio:20878217 PANTHER:PTHR10943:SF1
Uniprot:P56701
Length = 908
Score = 1564 (555.6 bits), Expect = 7.5e-253, Sum P(2) = 7.5e-253
Identities = 315/596 (52%), Positives = 418/596 (70%)
Query: 13 KVTKGKGEKNPD-EMSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMRDLIRXXXXXXX 71
K + G+K+ + E+SEEDK+LQ++L MLVE++ D LY PALE +R IR
Sbjct: 31 KERRDAGDKDKEQELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMT 90
Query: 72 XVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQDNVEQECLKYCLMAKQK 131
VP PLKFLR HYG LKE E M + K+ IISVLAM+ E+ECLKY L+ Q+
Sbjct: 91 SVPKPLKFLRPHYGKLKEIYENMAPGENKRFAADIISVLAMTMSG-ERECLKYRLVGSQE 149
Query: 132 DVGDWGHEYVRQLEAEIAEEWA----TNKYEKPQLLELIEDIIQFDMKHNAEIQACDLLM 187
++ WGHEYVR L E+A+EW K ++ LL L+++I+ ++M HNAE +ACDLLM
Sbjct: 150 ELASWGHEYVRHLAGEVAKEWQELDDAEKTQREPLLTLVKEIVPYNMAHNAEHEACDLLM 209
Query: 188 EIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEPERSVITNGVLNNYLKFKEYPRALTLA 247
EI+ +++L+K +D Y +VCLYL++C YV EPE S + L + KF +P AL LA
Sbjct: 210 EIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLA 269
Query: 248 LQLNDEPSVLKIFQLCEDPVVRKQLAYMAGRQQITIELPDEMPDKNDLQIIMTNSHINDH 307
L LND V IF C+D VV+KQ+A+M GR + +EL +++ + DL IM+N +N +
Sbjct: 270 LMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLELSEDVEEYEDLTEIMSNVQLNSN 329
Query: 308 FHSLARELDIMEPKTPEEVYKTWLENIVLRPTYNLDVPVDSARHNLASTFVNAFVNAGFS 367
F +LARELDIMEPK P+++YKT LEN + + VDSAR NLAS+FVN FVNA F
Sbjct: 330 FLALARELDIMEPKVPDDIYKTHLENNRFGGSGS---QVDSARMNLASSFVNGFVNAAFG 386
Query: 368 RDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYLYTSEDYIKAGAL 427
+DKL++ +DGNKW+YKNK HGMLSAAASLG+I LWDVDGGLT IDKYLY+SEDYIK+GAL
Sbjct: 387 QDKLLT-DDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGAL 445
Query: 428 LALGIVNCGVRNECDPALALLSDYVLNDSITLRIXXXXXXXXXXXXTKRQEVVTLLLPVL 487
LA GIVN GVRNECDPALALLSDYVL++S T+R+ + R++V+TLLLPV+
Sbjct: 446 LACGIVNSGVRNECDPALALLSDYVLHNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVM 505
Query: 488 TDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSELQDGHYSRFLPLALAI 547
D KS+ EV A+A +I VG+ +V S ILQT++E +EL+D Y+R+LPL L +
Sbjct: 506 GDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQTIMEKSETELKDT-YARWLPLGLGL 564
Query: 548 TYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLVVQEFLHVCSEHY 603
+LGK +AI+ LAALEV+ +PFRS A ++ +CAYAGSG+VL VQ+ LH+CSEH+
Sbjct: 565 NHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHF 620
Score = 894 (319.8 bits), Expect = 7.5e-253, Sum P(2) = 7.5e-253
Identities = 169/244 (69%), Positives = 208/244 (85%)
Query: 670 EEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAH 729
EEIG+EM+ R FG L RYGEPT+RRAVPLA+AL S+SNP LN++D L+K+SHD D EV++
Sbjct: 664 EEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSY 723
Query: 730 NAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHT 789
N+IF+MG+VG+GTNNARLA MLRQLAQYH K+ +LFMVR+AQGLTH+GKGT++L P+H+
Sbjct: 724 NSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHS 783
Query: 790 DRQILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAMYPRWLVTLDENQEPVSVS 849
DRQ+++ VA+AGLL VL SFLD +NIILGKSHY+LY LV AM PR LVT DE P+ VS
Sbjct: 784 DRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVS 843
Query: 850 VRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDDYVPLTPVMEGFVILRKK 909
VRVGQAVDV+G+AG PKTI G THTTPVLLA GERAELAT++++P+TP++EGFVILRK
Sbjct: 844 VRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRKN 903
Query: 910 DKDD 913
D
Sbjct: 904 PNYD 907
Score = 37 (18.1 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 9 DKDEKVTKGKGEKN-PDEM 26
DKD+K K K +K P +M
Sbjct: 628 DKDKKEKKDKDKKEAPADM 646
>UNIPROTKB|I3LEW5 [details] [associations]
symbol:PSMD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 Pfam:PF01851 CTD:5708 GeneTree:ENSGT00550000074983
KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1 EMBL:FP312667
RefSeq:NP_001230406.1 UniGene:Ssc.1642 Ensembl:ENSSSCT00000024405
GeneID:100627568 KEGG:ssc:100627568 Uniprot:I3LEW5
Length = 908
Score = 1564 (555.6 bits), Expect = 7.5e-253, Sum P(2) = 7.5e-253
Identities = 315/596 (52%), Positives = 418/596 (70%)
Query: 13 KVTKGKGEKNPD-EMSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMRDLIRXXXXXXX 71
K + G+K+ + E+SEEDK+LQ++L MLVE++ D LY PALE +R IR
Sbjct: 31 KERRDAGDKDKEQELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMT 90
Query: 72 XVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQDNVEQECLKYCLMAKQK 131
VP PLKFLR HYG LKE E M + K+ IISVLAM+ E+ECLKY L+ Q+
Sbjct: 91 SVPKPLKFLRPHYGKLKEIYENMAPGENKRFAADIISVLAMTMSG-ERECLKYRLVGSQE 149
Query: 132 DVGDWGHEYVRQLEAEIAEEWA----TNKYEKPQLLELIEDIIQFDMKHNAEIQACDLLM 187
++ WGHEYVR L E+A+EW K ++ LL L+++I+ ++M HNAE +ACDLLM
Sbjct: 150 ELASWGHEYVRHLAGEVAKEWQELDDAEKTQREPLLTLVKEIVPYNMAHNAEHEACDLLM 209
Query: 188 EIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEPERSVITNGVLNNYLKFKEYPRALTLA 247
EI+ +++L+K +D Y +VCLYL++C YV EPE S + L + KF +P AL LA
Sbjct: 210 EIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLA 269
Query: 248 LQLNDEPSVLKIFQLCEDPVVRKQLAYMAGRQQITIELPDEMPDKNDLQIIMTNSHINDH 307
L LND V IF C+D VV+KQ+A+M GR + +EL +++ + DL IM+N +N +
Sbjct: 270 LMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLELSEDVEEYEDLTEIMSNVQLNSN 329
Query: 308 FHSLARELDIMEPKTPEEVYKTWLENIVLRPTYNLDVPVDSARHNLASTFVNAFVNAGFS 367
F +LARELDIMEPK P+++YKT LEN + + VDSAR NLAS+FVN FVNA F
Sbjct: 330 FLALARELDIMEPKVPDDIYKTHLENNRFGGSGS---QVDSARMNLASSFVNGFVNAAFG 386
Query: 368 RDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYLYTSEDYIKAGAL 427
+DKL++ +DGNKW+YKNK HGMLSAAASLG+I LWDVDGGLT IDKYLY+SEDYIK+GAL
Sbjct: 387 QDKLLT-DDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGAL 445
Query: 428 LALGIVNCGVRNECDPALALLSDYVLNDSITLRIXXXXXXXXXXXXTKRQEVVTLLLPVL 487
LA GIVN GVRNECDPALALLSDYVL++S T+R+ + R++V+TLLLPV+
Sbjct: 446 LACGIVNSGVRNECDPALALLSDYVLHNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVM 505
Query: 488 TDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSELQDGHYSRFLPLALAI 547
D KS+ EV A+A +I VG+ +V S ILQT++E +EL+D Y+R+LPL L +
Sbjct: 506 GDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQTIMEKSETELKDT-YARWLPLGLGL 564
Query: 548 TYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLVVQEFLHVCSEHY 603
+LGK +AI+ LAALEV+ +PFRS A ++ +CAYAGSG+VL VQ+ LH+CSEH+
Sbjct: 565 NHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHF 620
Score = 894 (319.8 bits), Expect = 7.5e-253, Sum P(2) = 7.5e-253
Identities = 169/244 (69%), Positives = 208/244 (85%)
Query: 670 EEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAH 729
EEIG+EM+ R FG L RYGEPT+RRAVPLA+AL S+SNP LN++D L+K+SHD D EV++
Sbjct: 664 EEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSY 723
Query: 730 NAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHT 789
N+IF+MG+VG+GTNNARLA MLRQLAQYH K+ +LFMVR+AQGLTH+GKGT++L P+H+
Sbjct: 724 NSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHS 783
Query: 790 DRQILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAMYPRWLVTLDENQEPVSVS 849
DRQ+++ VA+AGLL VL SFLD +NIILGKSHY+LY LV AM PR LVT DE P+ VS
Sbjct: 784 DRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVS 843
Query: 850 VRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDDYVPLTPVMEGFVILRKK 909
VRVGQAVDV+G+AG PKTI G THTTPVLLA GERAELAT++++P+TP++EGFVILRK
Sbjct: 844 VRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRKN 903
Query: 910 DKDD 913
D
Sbjct: 904 PNYD 907
Score = 37 (18.1 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 9 DKDEKVTKGKGEKN-PDEM 26
DKD+K K K +K P +M
Sbjct: 628 DKDKKEKKDKDKKEAPADM 646
>MGI|MGI:1096584 [details] [associations]
symbol:Psmd2 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 2" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0022624 "proteasome accessory complex" evidence=IDA]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016643 PIRSF:PIRSF015965
MGI:MGI:1096584 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0042176 GO:GO:0022624 Pfam:PF01851 CTD:5708
eggNOG:COG5110 GeneTree:ENSGT00550000074983 HOGENOM:HOG000176022
HOVERGEN:HBG001842 KO:K03028 OMA:IAQGLTH OrthoDB:EOG483D3X
PANTHER:PTHR10943:SF1 ChiTaRS:PSMD2 EMBL:BC021508 EMBL:BC024830
EMBL:BC027388 EMBL:BC027767 EMBL:BC027822 EMBL:BC028851
EMBL:BC031128 IPI:IPI00123494 RefSeq:NP_598862.1 UniGene:Mm.243234
ProteinModelPortal:Q8VDM4 SMR:Q8VDM4 IntAct:Q8VDM4 STRING:Q8VDM4
PhosphoSite:Q8VDM4 PaxDb:Q8VDM4 PRIDE:Q8VDM4
Ensembl:ENSMUST00000007212 GeneID:21762 KEGG:mmu:21762
InParanoid:Q8VDM4 NextBio:301080 Bgee:Q8VDM4 Genevestigator:Q8VDM4
GermOnline:ENSMUSG00000006998 Uniprot:Q8VDM4
Length = 908
Score = 1562 (554.9 bits), Expect = 1.2e-252, Sum P(2) = 1.2e-252
Identities = 316/596 (53%), Positives = 417/596 (69%)
Query: 13 KVTKGKGEKNPD-EMSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMRDLIRXXXXXXX 71
K + GEK+ + E+SEEDK+LQ++L MLVE++ D LY PALE +R IR
Sbjct: 31 KERRDAGEKDKEQELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMT 90
Query: 72 XVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQDNVEQECLKYCLMAKQK 131
VP PLKFLR HYG LKE E M + K IISVLAM+ E+ECLKY L+ Q+
Sbjct: 91 SVPKPLKFLRPHYGKLKEIYENMAPGENKCFAADIISVLAMTMSG-ERECLKYRLVGSQE 149
Query: 132 DVGDWGHEYVRQLEAEIAEEWA----TNKYEKPQLLELIEDIIQFDMKHNAEIQACDLLM 187
++ WGHEYVR L E+A+EW K ++ LL L+++I+ ++M HNAE +ACDLLM
Sbjct: 150 ELASWGHEYVRHLAGEVAKEWQELDDAEKAQREPLLTLVKEIVPYNMAHNAEHEACDLLM 209
Query: 188 EIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEPERSVITNGVLNNYLKFKEYPRALTLA 247
EI+ +++L+K +D Y +VCLYL++C YV EPE S + L + KF +P AL LA
Sbjct: 210 EIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLA 269
Query: 248 LQLNDEPSVLKIFQLCEDPVVRKQLAYMAGRQQITIELPDEMPDKNDLQIIMTNSHINDH 307
L LND V IF C+D VV+KQ+A+M GR + +EL +++ + DL IM+N +N +
Sbjct: 270 LMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLELSEDVEEYEDLTEIMSNVQLNSN 329
Query: 308 FHSLARELDIMEPKTPEEVYKTWLENIVLRPTYNLDVPVDSARHNLASTFVNAFVNAGFS 367
F +LARELDIMEPK P+++YKT LEN + + VDSAR NLAS+FVN FVNA F
Sbjct: 330 FLALARELDIMEPKVPDDIYKTHLENNRFGGSGS---QVDSARMNLASSFVNGFVNAAFG 386
Query: 368 RDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYLYTSEDYIKAGAL 427
+DKL++ +DGNKW+YKNK HGMLSAAASLG+I LWDVDGGLT IDKYLY+SEDYIK+GAL
Sbjct: 387 QDKLLT-DDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGAL 445
Query: 428 LALGIVNCGVRNECDPALALLSDYVLNDSITLRIXXXXXXXXXXXXTKRQEVVTLLLPVL 487
LA GIVN GVRNECDPALALLSDYVL++S T+R+ + R++V+TLLLPV+
Sbjct: 446 LACGIVNSGVRNECDPALALLSDYVLHNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVM 505
Query: 488 TDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSELQDGHYSRFLPLALAI 547
D KS+ EV A+A +I VG+ +V S ILQT++E +EL+D Y+R+LPL L +
Sbjct: 506 GDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQTIMEKSETELKDT-YARWLPLGLGL 564
Query: 548 TYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLVVQEFLHVCSEHY 603
+LGK +AI+ LAALEV+ +PFRS A ++ +CAYAGSG+VL VQ+ LH+CSEH+
Sbjct: 565 NHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHF 620
Score = 894 (319.8 bits), Expect = 1.2e-252, Sum P(2) = 1.2e-252
Identities = 169/244 (69%), Positives = 208/244 (85%)
Query: 670 EEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAH 729
EEIG+EM+ R FG L RYGEPT+RRAVPLA+AL S+SNP LN++D L+K+SHD D EV++
Sbjct: 664 EEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSY 723
Query: 730 NAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHT 789
N+IF+MG+VG+GTNNARLA MLRQLAQYH K+ +LFMVR+AQGLTH+GKGT++L P+H+
Sbjct: 724 NSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHS 783
Query: 790 DRQILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAMYPRWLVTLDENQEPVSVS 849
DRQ+++ VA+AGLL VL SFLD +NIILGKSHY+LY LV AM PR LVT DE P+ VS
Sbjct: 784 DRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVS 843
Query: 850 VRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDDYVPLTPVMEGFVILRKK 909
VRVGQAVDV+G+AG PKTI G THTTPVLLA GERAELAT++++P+TP++EGFVILRK
Sbjct: 844 VRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRKN 903
Query: 910 DKDD 913
D
Sbjct: 904 PNYD 907
Score = 37 (18.1 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 9 DKDEKVTKGKGEKN-PDEM 26
DKD+K K K +K P +M
Sbjct: 628 DKDKKEKKDKDKKEAPADM 646
>UNIPROTKB|E2RCP9 [details] [associations]
symbol:PSMD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016643 PIRSF:PIRSF015965
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 Pfam:PF01851 CTD:5708
GeneTree:ENSGT00550000074983 KO:K03028 OMA:IAQGLTH
PANTHER:PTHR10943:SF1 EMBL:AAEX03017275 RefSeq:XP_535824.3
Ensembl:ENSCAFT00000020103 GeneID:478654 KEGG:cfa:478654
NextBio:20853959 Uniprot:E2RCP9
Length = 908
Score = 1559 (553.9 bits), Expect = 2.5e-252, Sum P(2) = 2.5e-252
Identities = 320/612 (52%), Positives = 423/612 (69%)
Query: 2 PEKIAVPDKDEKVTKGK-----GEKNPD-EMSEEDKRLQEDLNMLVEKIKGSDKHLYLPA 55
P A DEK + GK +K+ + E+SEEDK+LQ++L MLVE++ D LY PA
Sbjct: 16 PPATAPGSADEKPS-GKERRDASDKDKEQELSEEDKQLQDELEMLVERLGEKDTSLYRPA 74
Query: 56 LESMRDLIRXXXXXXXXVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQD 115
LE +R IR VP PLKFLR HYG LKE E M + K+ IISVLAM+
Sbjct: 75 LEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKRFAADIISVLAMTMS 134
Query: 116 NVEQECLKYCLMAKQKDVGDWGHEYVRQLEAEIAEEWA----TNKYEKPQLLELIEDIIQ 171
E+ECLKY L+ Q+++ WGHEYVR L E+A+EW K ++ LL L+++I+
Sbjct: 135 G-ERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQELDDAEKSQREPLLTLVKEIVP 193
Query: 172 FDMKHNAEIQACDLLMEIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEPERSVITNGVL 231
++M HNAE +ACDLLMEI+ +++L+K +D Y +VCLYL++C YV EPE S + L
Sbjct: 194 YNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCAL 253
Query: 232 NNYLKFKEYPRALTLALQLNDEPSVLKIFQLCEDPVVRKQLAYMAGRQQITIELPDEMPD 291
+ KF +P AL LAL LND V IF C+D VV+KQ+A+M GR + +EL +++ +
Sbjct: 254 GVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLELSEDVEE 313
Query: 292 KNDLQIIMTNSHINDHFHSLARELDIMEPKTPEEVYKTWLENIVLRPTYNLDVPVDSARH 351
DL IM+N +N +F +LARELDIMEPK P+++YKT LEN + + VDSAR
Sbjct: 314 YEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGGSGS---QVDSARM 370
Query: 352 NLASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPI 411
NLAS+FVN FVNA F +DKL++ +DGNKW+YKNK HGMLSAAASLG+I LWDVDGGLT I
Sbjct: 371 NLASSFVNGFVNAAFGQDKLLT-DDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQI 429
Query: 412 DKYLYTSEDYIKAGALLALGIVNCGVRNECDPALALLSDYVLNDSITLRIXXXXXXXXXX 471
DKYLY+SEDYIK+GALLA GIVN GVRNECDPALALLSDYVL++S T+R+
Sbjct: 430 DKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVLHNSNTMRLGSIFGLGLAY 489
Query: 472 XXTKRQEVVTLLLPVLTDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSE 531
+ R++V+TLLLPV+ D KS+ EV A+A +I VG+ +V S ILQT++E +E
Sbjct: 490 AGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQTIMEKSETE 549
Query: 532 LQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLV 591
L+D Y+R+LPL L + +LGK +AI+ LAALEV+ +PFRS A ++ +CAYAGSG+VL
Sbjct: 550 LKDT-YARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLK 608
Query: 592 VQEFLHVCSEHY 603
VQ+ LH+CSEH+
Sbjct: 609 VQQLLHICSEHF 620
Score = 894 (319.8 bits), Expect = 2.5e-252, Sum P(2) = 2.5e-252
Identities = 169/244 (69%), Positives = 208/244 (85%)
Query: 670 EEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAH 729
EEIG+EM+ R FG L RYGEPT+RRAVPLA+AL S+SNP LN++D L+K+SHD D EV++
Sbjct: 664 EEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSY 723
Query: 730 NAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHT 789
N+IF+MG+VG+GTNNARLA MLRQLAQYH K+ +LFMVR+AQGLTH+GKGT++L P+H+
Sbjct: 724 NSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHS 783
Query: 790 DRQILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAMYPRWLVTLDENQEPVSVS 849
DRQ+++ VA+AGLL VL SFLD +NIILGKSHY+LY LV AM PR LVT DE P+ VS
Sbjct: 784 DRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVS 843
Query: 850 VRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDDYVPLTPVMEGFVILRKK 909
VRVGQAVDV+G+AG PKTI G THTTPVLLA GERAELAT++++P+TP++EGFVILRK
Sbjct: 844 VRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRKN 903
Query: 910 DKDD 913
D
Sbjct: 904 PNYD 907
Score = 37 (18.1 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 9 DKDEKVTKGKGEKN-PDEM 26
DKD+K K K +K P +M
Sbjct: 628 DKDKKEKKDKDKKEAPADM 646
>FB|FBgn0028695 [details] [associations]
symbol:Rpn1 "Regulatory particle non-ATPase 1" species:7227
"Drosophila melanogaster" [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IMP]
[GO:0000022 "mitotic spindle elongation" evidence=IMP] [GO:0007052
"mitotic spindle organization" evidence=IMP] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0030234 EMBL:AE014296 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008283 GO:GO:0006508 GO:GO:0050790
GO:GO:0004175 GO:GO:0042176 GO:GO:0000022 GO:GO:0008540
BRENDA:3.4.25.1 Pfam:PF01851 eggNOG:COG5110
GeneTree:ENSGT00550000074983 KO:K03028 OMA:IAQGLTH
PANTHER:PTHR10943:SF1 CTD:6184 EMBL:AF132182 EMBL:AF145304
RefSeq:NP_649158.1 UniGene:Dm.3192 IntAct:Q9VW54 MINT:MINT-294744
STRING:Q9VW54 EnsemblMetazoa:FBtr0074893 GeneID:40174
KEGG:dme:Dmel_CG7762 UCSC:CG7762-RA FlyBase:FBgn0028695
InParanoid:Q9VW54 OrthoDB:EOG4R228T GenomeRNAi:40174 NextBio:817408
Uniprot:Q9VW54
Length = 919
Score = 1439 (511.6 bits), Expect = 7.9e-238, Sum P(2) = 7.9e-238
Identities = 291/602 (48%), Positives = 411/602 (68%)
Query: 10 KDEKVTKGKGEKNPDEMSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMRDLIRXXXXX 69
KDEK GK ++ E+S+ED++LQE+L +LV+ ++ D LY P LESM LIR
Sbjct: 28 KDEK-KDGKDKEQQPELSDEDQQLQEELELLVQHLQEPDAKLYQPTLESMAKLIRASTTS 86
Query: 70 XXXVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQDNVEQECLKYCLMAK 129
VP PLKF+R HY +K + M +++ ++L IISVL+M+ + ++CL Y +
Sbjct: 87 MTSVPKPLKFMRPHYETMKTVYKHMPNEQARQLCADIISVLSMTMGS-GKDCLAYRFLCD 145
Query: 130 QKD-VGDWGHEYVRQLEAEIAEEW--ATNKYEKPQLLELIEDIIQFDMKHNAEIQACDLL 186
+K +GDWGHEYVR L EI+ + T + + QL+EL++ II ++M+HNAE ACDLL
Sbjct: 146 RKQRIGDWGHEYVRHLSGEISAHYHDTTGDF-RVQLIELVKQIIPYNMEHNAEADACDLL 204
Query: 187 MEIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEPERSVITNGVLNNYLKFKEYPRALTL 246
+EIDHL LL +D + YPRVCLYL +C YV +P+ ++I L KF +Y +A+ L
Sbjct: 205 IEIDHLHLLSDFVDESAYPRVCLYLQSCYPYVPDPDNTIILETALQLSRKFNQYTQAMRL 264
Query: 247 ALQLNDEPSVLKIFQLCEDPVVRKQLAYMAGRQQITIELPDEMPDKNDLQIIMTNSHIND 306
AL LND + +IF+ ++P ++KQLA+M RQQI +EL + +PD +DL IM+N+++N
Sbjct: 265 ALMLNDMDKIGEIFKEPKEPAMQKQLAFMLARQQICLELDELVPDYDDLMEIMSNANLNK 324
Query: 307 HFHSLARELDIMEPKTPEEVYKTWLENIVLRPTYNLDVPVDSARHNLASTFVNAFVNAGF 366
HF +LARELDIMEPKTPE++YK+ L+N R + + VDSA+ NLA++FVN FVNAGF
Sbjct: 325 HFLNLARELDIMEPKTPEDIYKSHLDNS--RSRF-ASIQVDSAKQNLAASFVNGFVNAGF 381
Query: 367 SRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYLYTSEDYIKAGA 426
DKL+S EDGNKW+YKNK+HGMLSA ASLGLI LWDVDGGLT IDKYLY+++D IK+GA
Sbjct: 382 GVDKLLS-EDGNKWLYKNKEHGMLSATASLGLILLWDVDGGLTMIDKYLYSTDDNIKSGA 440
Query: 427 LLALGIVNCGVRNECDPALALLSDYVLNDSITLRIXXXXXXXXXXXXTKRQEVVTLLLPV 486
LLA GIVNCG+RNE DPA ALLSDY+ N + +R+ + R V+ L V
Sbjct: 441 LLACGIVNCGIRNEVDPAHALLSDYIDNQNSCMRVGAILGLGIAYAGSNRSIVIDTLKTV 500
Query: 487 LT---DRKSTP--EVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSELQDGHYSRFL 541
+ + KS+ E++ A++ LI VG+ E+ +LQT++ L ++L+D Y+RFL
Sbjct: 501 FSFGSNNKSSASVEILGITALSLGLISVGSCNSEITEILLQTIMGLTKADLKDT-YTRFL 559
Query: 542 PLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLVVQEFLHVCSE 601
L L + YLG++ + + + LEVL +P+RSMA M+ +CAYAG+G+VL +Q+ LH+CS+
Sbjct: 560 FLGLGLLYLGRQKSTEAVMMTLEVLEEPYRSMATTMVDICAYAGTGNVLKIQQLLHICSD 619
Query: 602 HY 603
HY
Sbjct: 620 HY 621
Score = 877 (313.8 bits), Expect = 7.9e-238, Sum P(2) = 7.9e-238
Identities = 170/257 (66%), Positives = 203/257 (78%)
Query: 652 LSSMQXXXXXXXXXXXXXEEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALN 711
LS+ Q E+IG+EM+ R FG L RY EP +RRAVPLA+ L S SNP LN
Sbjct: 657 LSATQSIAVLGIALIAMGEDIGAEMAYRSFGNLLRYCEPAIRRAVPLALGLISASNPKLN 716
Query: 712 VIDVLNKYSHDLDEEVAHNAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIA 771
+ID L+K+SHD D EVAHNAIF+MGLVGAGTNNARLA+MLRQLAQYH K+ +LFMVRIA
Sbjct: 717 IIDTLSKFSHDSDAEVAHNAIFAMGLVGAGTNNARLASMLRQLAQYHSKDPSNLFMVRIA 776
Query: 772 QGLTHMGKGTVSLSPFHTDRQILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAM 831
Q LTH+GKGT+SLSP+H+DRQ++NP+A+AGL+ L S LD KN+IL +SHYLLY LVPAM
Sbjct: 777 QSLTHLGKGTLSLSPYHSDRQLMNPMAVAGLMATLVSLLDVKNLILNRSHYLLYTLVPAM 836
Query: 832 YPRWLVTLDENQEPVSVSVRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATD 891
R L+T DE + V VRVG A+DV+G+AG PKTI G THTTPVLLA+GERAELATD
Sbjct: 837 QARMLITFDEELNQLQVPVRVGIAIDVVGQAGKPKTITGFQTHTTPVLLAIGERAELATD 896
Query: 892 DYVPLTPVMEGFVILRK 908
+Y+ LTPVMEGFVIL+K
Sbjct: 897 EYLALTPVMEGFVILKK 913
Score = 53 (23.7 bits), Expect = 2.4e-91, Sum P(2) = 2.4e-91
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 3 EKIAVPDKDEKVTKGKG-EKNPDEMSEEDKRLQEDLN 38
E + D+ EK K KG +K ++ E++K ++DL+
Sbjct: 622 ETSSADDEKEKSKKDKGKDKEKEKEKEKEKEREKDLS 658
>UNIPROTKB|E7EW34 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9606 "Homo sapiens" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016643 PIRSF:PIRSF015965
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 EMBL:AC078797 Pfam:PF01851
PANTHER:PTHR10943:SF1 HGNC:HGNC:9559 ChiTaRS:PSMD2 IPI:IPI00926258
ProteinModelPortal:E7EW34 PRIDE:E7EW34 Ensembl:ENST00000439383
ArrayExpress:E7EW34 Bgee:E7EW34 Uniprot:E7EW34
Length = 778
Score = 1342 (477.5 bits), Expect = 2.3e-229, Sum P(2) = 2.3e-229
Identities = 265/490 (54%), Positives = 354/490 (72%)
Query: 118 EQECLKYCLMAKQKDVGDWGHEYVRQLEAEIAEEWA----TNKYEKPQLLELIEDIIQFD 173
E+ECLKY L+ Q+++ WGHEYVR L E+A+EW K ++ LL L+++I+ ++
Sbjct: 6 ERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQELDDAEKVQREPLLTLVKEIVPYN 65
Query: 174 MKHNAEIQACDLLMEIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEPERSVITNGVLNN 233
M HNAE +ACDLLMEI+ +++L+K +D Y +VCLYL++C YV EPE S + L
Sbjct: 66 MAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYVPEPENSALLRCALGV 125
Query: 234 YLKFKEYPRALTLALQLNDEPSVLKIFQLCEDPVVRKQLAYMAGRQQITIELPDEMPDKN 293
+ KF +P AL LAL LND V IF C+D VV+KQ+A+M GR + +EL +++ +
Sbjct: 126 FRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGRHGVFLELSEDVEEYE 185
Query: 294 DLQIIMTNSHINDHFHSLARELDIMEPKTPEEVYKTWLENIVLRPTYNLDVPVDSARHNL 353
DL IM+N +N +F +LARELDIMEPK P+++YKT LEN + + VDSAR NL
Sbjct: 186 DLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGGSGS---QVDSARMNL 242
Query: 354 ASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDK 413
AS+FVN FVNA F +DKL++ +DGNKW+YKNK HGMLSAAASLG+I LWDVDGGLT IDK
Sbjct: 243 ASSFVNGFVNAAFGQDKLLT-DDGNKWLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDK 301
Query: 414 YLYTSEDYIKAGALLALGIVNCGVRNECDPALALLSDYVLNDSITLRIXXXXXXXXXXXX 473
YLY+SEDYIK+GALLA GIVN GVRNECDPALALLSDYVL++S T+R+
Sbjct: 302 YLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVLHNSNTMRLGSIFGLGLAYAG 361
Query: 474 TKRQEVVTLLLPVLTDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSELQ 533
+ R++V+TLLLPV+ D KS+ EV A+A +I VG+ +V S ILQT++E +EL+
Sbjct: 362 SNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQTIMEKSETELK 421
Query: 534 DGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLVVQ 593
D Y+R+LPL L + +LGK +AI+ LAALEV+ +PFRS A ++ +CAYAGSG+VL VQ
Sbjct: 422 DT-YARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAYAGSGNVLKVQ 480
Query: 594 EFLHVCSEHY 603
+ LH+CSEH+
Sbjct: 481 QLLHICSEHF 490
Score = 894 (319.8 bits), Expect = 2.3e-229, Sum P(2) = 2.3e-229
Identities = 169/244 (69%), Positives = 208/244 (85%)
Query: 670 EEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAH 729
EEIG+EM+ R FG L RYGEPT+RRAVPLA+AL S+SNP LN++D L+K+SHD D EV++
Sbjct: 534 EEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSY 593
Query: 730 NAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHT 789
N+IF+MG+VG+GTNNARLA MLRQLAQYH K+ +LFMVR+AQGLTH+GKGT++L P+H+
Sbjct: 594 NSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHS 653
Query: 790 DRQILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAMYPRWLVTLDENQEPVSVS 849
DRQ+++ VA+AGLL VL SFLD +NIILGKSHY+LY LV AM PR LVT DE P+ VS
Sbjct: 654 DRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVS 713
Query: 850 VRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDDYVPLTPVMEGFVILRKK 909
VRVGQAVDV+G+AG PKTI G THTTPVLLA GERAELAT++++P+TP++EGFVILRK
Sbjct: 714 VRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRKN 773
Query: 910 DKDD 913
D
Sbjct: 774 PNYD 777
Score = 37 (18.1 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 9 DKDEKVTKGKGEKN-PDEM 26
DKD+K K K +K P +M
Sbjct: 498 DKDKKEKKDKDKKEAPADM 516
>UNIPROTKB|E9PCS3 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9606 "Homo sapiens" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016643 PIRSF:PIRSF015965
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 EMBL:AC078797 Pfam:PF01851
PANTHER:PTHR10943:SF1 HGNC:HGNC:9559 ChiTaRS:PSMD2 IPI:IPI00926410
ProteinModelPortal:E9PCS3 PRIDE:E9PCS3 Ensembl:ENST00000435761
UCSC:uc011brj.1 ArrayExpress:E9PCS3 Bgee:E9PCS3 Uniprot:E9PCS3
Length = 749
Score = 1248 (444.4 bits), Expect = 2.0e-219, Sum P(2) = 2.0e-219
Identities = 249/464 (53%), Positives = 334/464 (71%)
Query: 144 LEAEIAEEWA----TNKYEKPQLLELIEDIIQFDMKHNAEIQACDLLMEIDHLELLDKHM 199
+ E+A+EW K ++ LL L+++I+ ++M HNAE +ACDLLMEI+ +++L+K +
Sbjct: 3 MSGEVAKEWQELDDAEKVQREPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDI 62
Query: 200 DVTNYPRVCLYLSNCALYVEEPERSVITNGVLNNYLKFKEYPRALTLALQLNDEPSVLKI 259
D Y +VCLYL++C YV EPE S + L + KF +P AL LAL LND V I
Sbjct: 63 DENAYAKVCLYLTSCVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDI 122
Query: 260 FQLCEDPVVRKQLAYMAGRQQITIELPDEMPDKNDLQIIMTNSHINDHFHSLARELDIME 319
F C+D VV+KQ+A+M GR + +EL +++ + DL IM+N +N +F +LARELDIME
Sbjct: 123 FTSCKDVVVQKQMAFMLGRHGVFLELSEDVEEYEDLTEIMSNVQLNSNFLALARELDIME 182
Query: 320 PKTPEEVYKTWLENIVLRPTYNLDVPVDSARHNLASTFVNAFVNAGFSRDKLVSVEDGNK 379
PK P+++YKT LEN + + VDSAR NLAS+FVN FVNA F +DKL++ +DGNK
Sbjct: 183 PKVPDDIYKTHLENNRFGGSGS---QVDSARMNLASSFVNGFVNAAFGQDKLLT-DDGNK 238
Query: 380 WMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYLYTSEDYIKAGALLALGIVNCGVRN 439
W+YKNK HGMLSAAASLG+I LWDVDGGLT IDKYLY+SEDYIK+GALLA GIVN GVRN
Sbjct: 239 WLYKNKDHGMLSAAASLGMILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRN 298
Query: 440 ECDPALALLSDYVLNDSITLRIXXXXXXXXXXXXTKRQEVVTLLLPVLTDRKSTPEVVAF 499
ECDPALALLSDYVL++S T+R+ + R++V+TLLLPV+ D KS+ EV
Sbjct: 299 ECDPALALLSDYVLHNSNTMRLGSIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGV 358
Query: 500 AAVAASLIYVGTGYHEVASAILQTLIELPVSELQDGHYSRFLPLALAITYLGKKDAIDTT 559
A+A +I VG+ +V S ILQT++E +EL+D Y+R+LPL L + +LGK +AI+
Sbjct: 359 TALACGMIAVGSCNGDVTSTILQTIMEKSETELKDT-YARWLPLGLGLNHLGKGEAIEAI 417
Query: 560 LAALEVLPDPFRSMAKMMLKMCAYAGSGDVLVVQEFLHVCSEHY 603
LAALEV+ +PFRS A ++ +CAYAGSG+VL VQ+ LH+CSEH+
Sbjct: 418 LAALEVVSEPFRSFANTLVDVCAYAGSGNVLKVQQLLHICSEHF 461
Score = 894 (319.8 bits), Expect = 2.0e-219, Sum P(2) = 2.0e-219
Identities = 169/244 (69%), Positives = 208/244 (85%)
Query: 670 EEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAH 729
EEIG+EM+ R FG L RYGEPT+RRAVPLA+AL S+SNP LN++D L+K+SHD D EV++
Sbjct: 505 EEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSY 564
Query: 730 NAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHT 789
N+IF+MG+VG+GTNNARLA MLRQLAQYH K+ +LFMVR+AQGLTH+GKGT++L P+H+
Sbjct: 565 NSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHS 624
Query: 790 DRQILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAMYPRWLVTLDENQEPVSVS 849
DRQ+++ VA+AGLL VL SFLD +NIILGKSHY+LY LV AM PR LVT DE P+ VS
Sbjct: 625 DRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVS 684
Query: 850 VRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDDYVPLTPVMEGFVILRKK 909
VRVGQAVDV+G+AG PKTI G THTTPVLLA GERAELAT++++P+TP++EGFVILRK
Sbjct: 685 VRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVILRKN 744
Query: 910 DKDD 913
D
Sbjct: 745 PNYD 748
Score = 37 (18.1 bits), Expect = 1.9e-91, Sum P(2) = 1.9e-91
Identities = 9/19 (47%), Positives = 12/19 (63%)
Query: 9 DKDEKVTKGKGEKN-PDEM 26
DKD+K K K +K P +M
Sbjct: 469 DKDKKEKKDKDKKEAPADM 487
>WB|WBGene00004458 [details] [associations]
symbol:rpn-1 species:6239 "Caenorhabditis elegans"
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0008340 GO:GO:0009792 GO:GO:0040007 GO:GO:0006915
GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0002119 GO:GO:0000003
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 EMBL:FO080211
Pfam:PF01851 eggNOG:COG5110 GeneTree:ENSGT00550000074983
HOGENOM:HOG000176022 KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1
PIR:T32707 RefSeq:NP_501064.1 ProteinModelPortal:Q9GZH5
IntAct:Q9GZH5 MINT:MINT-210711 STRING:Q9GZH5 PaxDb:Q9GZH5
EnsemblMetazoa:T22D1.9.1 EnsemblMetazoa:T22D1.9.2 GeneID:177455
KEGG:cel:CELE_T22D1.9 UCSC:T22D1.9.1 CTD:177455 WormBase:T22D1.9
InParanoid:Q9GZH5 NextBio:896900 Uniprot:Q9GZH5
Length = 981
Score = 1307 (465.1 bits), Expect = 1.7e-213, Sum P(2) = 1.7e-213
Identities = 268/616 (43%), Positives = 389/616 (63%)
Query: 2 PEKIAVPDKDEKVTKGKGEKNPDEMSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMRD 61
P++ D+K K E +EMSEED++L+EDLN+LV+++ D LY P+LE+MR
Sbjct: 9 PKEADKKKADDKKVPEKAEPKKEEMSEEDQKLEEDLNLLVQRLSEPDTTLYKPSLETMRT 68
Query: 62 LIRXXXXXXXXVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQDNVEQEC 121
LIR VP PLKF+R HY +KE + KKL IISVLAM+ D +
Sbjct: 69 LIRASTTSMTSVPKPLKFMRPHYNKMKEIFTSIVAPDVKKLCADIISVLAMTSDE-RTDT 127
Query: 122 LKYCLMAKQKDVGDWGHEYVRQLEAEIAEEW---ATNKYEKPQLLELIEDIIQFDMKHNA 178
+ Y ++ + +GDWGHEYVR L E++EEW T+ K +LL+L +DI+ MKHNA
Sbjct: 128 INYRILGSHEPIGDWGHEYVRHLAMEMSEEWKKEGTSDARKAELLKLTQDIVSHHMKHNA 187
Query: 179 EIQACDLLMEIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEPERSVITNGVLNNYLKFK 238
E++ACDLL+EI+ ++LL ++ ++ RVCLYL +CA +P+ ++ L YLKF
Sbjct: 188 EVEACDLLIEIERIDLLISYVQEVDHQRVCLYLLSCAPLTPDPDNIILIRTALQLYLKFN 247
Query: 239 EYPRALTLALQLNDEPSVLKIFQLCEDPVVRKQLAYMAGRQQITIELPDEMPDKNDLQII 298
Y A+ A+ +ND P V +IF DP++RKQ+A + GR QI ++ + D + L +
Sbjct: 248 RYLEAVRCAIMVNDIPQVHQIFAKASDPLLRKQMAILLGRHQIFLDY-EGSADSDALAEL 306
Query: 299 MTNSHINDHFHSLARELDIMEPKTPEEVYKTWLENIVLRPTYNLDVPVDSARHNLASTFV 358
+N+H+ ++FHSLARELDIMEPKTPE +YK+ LE+ RP N P DS R NLA+ V
Sbjct: 307 NSNAHLYEYFHSLARELDIMEPKTPEGIYKSHLEHS--RPFGNSAQP-DSTRMNLAAALV 363
Query: 359 NAFVNAGFSRDKLVS-VEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYLYT 417
N FVN GF DK+++ E+ ++W YKNK++GML+AAAS GLI+ WD+D GL D++LY
Sbjct: 364 NGFVNCGFGVDKMMAETEEASRWFYKNKEYGMLTAAASQGLIWRWDIDTGLAQCDRFLYI 423
Query: 418 SEDYIKAGALLALGIVNCGVRNECDPALALLSDYVLNDSITLRIXXXXXXXXXXXXTKRQ 477
++DYIKAG LLA+GI++ G+++ CDPA ALL D+V +D +R+ +KR+
Sbjct: 424 NDDYIKAGTLLAIGIISSGIQDACDPASALLLDHVQSDRSIMRVGSILGLGLAYANSKRE 483
Query: 478 EV--------VTLLLPVLTDRKST--PEVVAFAAVAASLIYVGTGYHEVASAILQTLIEL 527
V + L VL+D+K + PEV A ++ LI VGT E A +LQ L++
Sbjct: 484 TVTKNEERGVIFELKKVLSDQKPSAIPEVKGLAGLSLGLILVGTADAEAAMEMLQALMDK 543
Query: 528 PVSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSG 587
+EL D + RFL L +A+ +L +D D + +L LPDPF +M ++++CAYAG+G
Sbjct: 544 SETELTDPNM-RFLALGIALIFLQTQDKSDVFVESLRSLPDPFGAMVSTLVEVCAYAGTG 602
Query: 588 DVLVVQEFLHVCSEHY 603
+VL +Q+ LH+CSEHY
Sbjct: 603 NVLKIQKLLHLCSEHY 618
Score = 779 (279.3 bits), Expect = 1.7e-213, Sum P(2) = 1.7e-213
Identities = 158/264 (59%), Positives = 198/264 (75%)
Query: 652 LSSMQXXXXXXXXXXXXXEEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALN 711
LSS Q ++IGS+M+ R+FG L RYGEP +RRAVPLA++L S+SNP LN
Sbjct: 705 LSSQQAVAVLGIGLIAMGDDIGSQMALRMFGHLIRYGEPVIRRAVPLALSLLSVSNPQLN 764
Query: 712 VIDVLNKYSHDLDEEVAHNAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIA 771
+++ L+K+SHD D + AHNAIF+MGLVGAGTNNARL MLR LA YH K+ L +VRIA
Sbjct: 765 ILETLSKFSHDSDADTAHNAIFAMGLVGAGTNNARLVAMLRNLASYHYKDQVSLMLVRIA 824
Query: 772 QGLTHMGKGTVSLSPFHTDRQILNPVALAGLLVVLTSFLDTKNIILG-KSHYLLYCLVPA 830
QGLTH+GKGT++L+P+H+DRQ+L+P ALA LL + SFLD N IL + HYLLY LV A
Sbjct: 825 QGLTHLGKGTMTLNPWHSDRQLLSPSALASLLSICFSFLDANNTILNNRQHYLLYTLVLA 884
Query: 831 MYPRWLVTLDENQ-EP-----VSVSVRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGE 884
M PR L TL E++ +P ++VSVRVGQAVDV+ +AG PKTI G THTTPVLLA GE
Sbjct: 885 MQPRMLTTLVEDEMKPGSLKQLNVSVRVGQAVDVVAQAGKPKTITGFQTHTTPVLLAHGE 944
Query: 885 RAELATDDYVPLTPVMEGFVILRK 908
RAELA D+Y+ +TP +EG VIL+K
Sbjct: 945 RAELANDEYLSVTPHLEGLVILKK 968
>TAIR|locus:2046016 [details] [associations]
symbol:RPN1A "26S proteasome regulatory subunit S2 1A"
species:3702 "Arabidopsis thaliana" [GO:0000502 "proteasome
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS;IDA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0030163 "protein catabolic process"
evidence=TAS] [GO:0051726 "regulation of cell cycle" evidence=IMP]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0043130 "ubiquitin
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0007010 "cytoskeleton organization" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0005829 GO:GO:0005886 GO:GO:0009506 GO:GO:0005634
GO:GO:0030234 EMBL:CP002685 GenomeReviews:CT485783_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0051726 GO:GO:0030163 GO:GO:0000502 GO:GO:0042176
GO:GO:0043130 EMBL:AC007048 Pfam:PF01851 eggNOG:COG5110
HOGENOM:HOG000176022 KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1
EMBL:AY230828 EMBL:AF360216 EMBL:AY040061 EMBL:AK220903
IPI:IPI00529314 PIR:A84591 RefSeq:NP_565477.1 UniGene:At.22879
ProteinModelPortal:Q9SIV2 IntAct:Q9SIV2 STRING:Q9SIV2 PaxDb:Q9SIV2
PRIDE:Q9SIV2 EnsemblPlants:AT2G20580.1 GeneID:816580
KEGG:ath:AT2G20580 TAIR:At2g20580 InParanoid:Q9SIV2
PhylomeDB:Q9SIV2 ProtClustDB:CLSN2688277 Genevestigator:Q9SIV2
Uniprot:Q9SIV2
Length = 891
Score = 1274 (453.5 bits), Expect = 2.3e-207, Sum P(2) = 2.3e-207
Identities = 269/614 (43%), Positives = 388/614 (63%)
Query: 5 IAVPDKDEKVTKGKGEKNPDEMSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMRDLIR 64
+ VP KD K K EK +++SEED L+++L + VE+++ + L ALESMR IR
Sbjct: 21 LKVPSKDPKK---KDEKKDEDLSEEDLELKQNLELYVERVQDPNPELQKAALESMRQEIR 77
Query: 65 XXXXXXXXVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSIISVLA--MSQDNVEQECL 122
VP PLKFLR HYG LK E M D KK L I+SVLA MS D E+E L
Sbjct: 78 ASTSSMTSVPKPLKFLRPHYGTLKAFHETMADSDLKKYLSDILSVLALTMSADG-ERESL 136
Query: 123 KYCLMAKQKDVGDWGHEYVRQLEAEIAEEWATNKYEKPQ---LLELIEDIIQFDMKHNAE 179
++ L+ + D+G WGHEYVR L EIA+E+ + E+ L+EL++ I+ F MKHNAE
Sbjct: 137 RFRLIGTEGDIGSWGHEYVRNLAGEIAQEYTKRQSEEASIDDLMELVQQIVAFHMKHNAE 196
Query: 180 IQACDLLMEIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEPERSVITNGVLNNYLKFKE 239
+A DLLM+++ L+LL +H+D TN+ R C YL++ A Y+ P+ ++ + Y+KF+E
Sbjct: 197 TEAVDLLMDVEDLDLLLEHVDKTNFKRTCNYLTSAARYLPGPDDMLVLDISYMIYMKFEE 256
Query: 240 YPRALTLALQLNDEPSVLKIFQLCEDPVVRKQLAYMAGRQQITIELPDEM----PDKNDL 295
YP AL +AL L++ V ++F C D + +KQ YM R IT EL DEM D+ L
Sbjct: 257 YPNALQIALFLDNTQYVKQVFTSCTDLLKKKQFCYMIARHGITFELDDEMVADDDDREAL 316
Query: 296 QIIMTNSHINDHFHSLARELDIMEPKTPEEVYKTWLENIVLRPTYNLDVPVDSARHNLAS 355
Q I+ N+ +++ + +LAR++++ME KTPE++YK L L + VDSAR NLA+
Sbjct: 317 QDIVNNTKLSEGYLTLARDIEVMEAKTPEDIYKAHL----LDGRASSGASVDSARQNLAA 372
Query: 356 TFVNAFVNAGFSRDKLVSV-------EDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGL 408
TFVNAFVNAGF +DKL++V GN W++KNK+HG SAAASLG+I LWDVD GL
Sbjct: 373 TFVNAFVNAGFGQDKLMTVPSDSTTGSSGN-WLFKNKEHGKTSAAASLGMIQLWDVDSGL 431
Query: 409 TPIDKYLYTSEDYIKAGALLALGIVNCGVRNECDPALALLSDYVLNDSITLRIXXXXXXX 468
+ +DKY +++++ I AGALL +GIVNCG++N+CDPALALL DY+ + ++RI
Sbjct: 432 SQLDKYFHSNDNPIIAGALLGVGIVNCGIKNDCDPALALLGDYIDKEDSSVRIGAIMGLG 491
Query: 469 XXXXXTKRQEVVTLLLPVLTDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELP 528
++ ++ L P+L D K+ +V+AFA+++ +IYVG+ EVA +I+ L++
Sbjct: 492 ISYAGSQNDQIRNKLSPILNDAKAPLDVIAFASLSLGMIYVGSCNEEVAQSIIFALMDRS 551
Query: 529 VSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGD 588
+EL D +RFLPL L + YLGK+++++ T + + R M L CAYAG+G+
Sbjct: 552 EAELGDA-LTRFLPLGLGLLYLGKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGN 610
Query: 589 VLVVQEFLHVCSEH 602
VL VQ+ L C EH
Sbjct: 611 VLKVQDLLAQCGEH 624
Score = 754 (270.5 bits), Expect = 2.3e-207, Sum P(2) = 2.3e-207
Identities = 144/239 (60%), Positives = 189/239 (79%)
Query: 670 EEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAH 729
EE+G +M R ++ +YGE +RRAVPLA+ L +SNP + V+D L++ SHD D EVA
Sbjct: 646 EELGVDMEIRSLERMLQYGEQNIRRAVPLALGLLCISNPKVTVMDTLSRLSHDTDSEVAM 705
Query: 730 NAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHT 789
+AI S+GL+GAGTNNAR+A MLR L+ Y+ K+ LF VRIAQGL HMGKG ++LSPFH+
Sbjct: 706 SAIISLGLIGAGTNNARIAGMLRNLSSYYYKDMSLLFCVRIAQGLVHMGKGLLTLSPFHS 765
Query: 790 DRQILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAMYPRWLVTLDENQEPVSVS 849
+R +L+P ALAG++ +L + LD K IILGK HY+LY LV AM PR ++T+DEN +P+SV
Sbjct: 766 ERFLLSPTALAGIVTLLHACLDMKPIILGKYHYVLYFLVLAMQPRMMLTVDENLKPLSVP 825
Query: 850 VRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDDYVPLTPVMEGFVILRK 908
VRVGQAVDV+G+AG PKTI G TH+TPVLLA GERAELATD Y+PL+P++EGF+IL++
Sbjct: 826 VRVGQAVDVVGQAGRPKTITGFQTHSTPVLLAAGERAELATDKYIPLSPILEGFIILKE 884
>TAIR|locus:2121358 [details] [associations]
symbol:RPN1B "26S proteasome regulatory subunit S2 1B"
species:3702 "Arabidopsis thaliana" [GO:0000502 "proteasome
complex" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=TAS]
[GO:0030163 "protein catabolic process" evidence=TAS] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0030234 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0030163 EMBL:AL021749 EMBL:AL161572 GO:GO:0042176
UniGene:At.13247 GO:GO:0008540 Pfam:PF01851 eggNOG:COG5110
HOGENOM:HOG000176022 KO:K03028 PANTHER:PTHR10943:SF1 OMA:QWNINEG
ProtClustDB:CLSN2688277 EMBL:AY230829 IPI:IPI00657061 PIR:T04617
RefSeq:NP_194576.5 UniGene:At.32013 ProteinModelPortal:Q6XJG8
SMR:Q6XJG8 IntAct:Q6XJG8 STRING:Q6XJG8 PaxDb:Q6XJG8 PRIDE:Q6XJG8
EnsemblPlants:AT4G28470.1 GeneID:828964 KEGG:ath:AT4G28470
TAIR:At4g28470 InParanoid:Q6XJG8 PhylomeDB:Q6XJG8
Genevestigator:Q6XJG8 Uniprot:Q6XJG8
Length = 891
Score = 1239 (441.2 bits), Expect = 4.4e-202, Sum P(2) = 4.4e-202
Identities = 260/611 (42%), Positives = 383/611 (62%)
Query: 7 VPDKDEKVTKGKGEKNPDEMSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMRDLIRXX 66
+P KD +K K +K +++SEED +L+++L + VE+++ + L ALESMR IR
Sbjct: 23 IPSKD---SKKKDDKKEEDLSEEDLQLKQNLELYVERVQDPNPELQKIALESMRKEIRDS 79
Query: 67 XXXXXXVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQD-NVEQECLKYC 125
VP PLKFLR HYG LKE KM + KK+L I+SVLA++ E+E L Y
Sbjct: 80 TSSMTSVPKPLKFLRPHYGVLKEFHAKMAESDLKKMLADILSVLALTMSAEGERESLNYR 139
Query: 126 LMAKQKDVGDWGHEYVRQLEAEIAEEWATNKYEKPQ---LLELIEDIIQFDMKHNAEIQA 182
L + D+G WGHEYVR L EIA+E+ + E+ L++L++ I+ F MKHNAE +A
Sbjct: 140 LNGSESDIGSWGHEYVRNLAGEIAKEYTIRQGEESSIEDLMDLVQQIVSFHMKHNAETEA 199
Query: 183 CDLLMEIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEPERSVITNGVLNNYLKFKEYPR 242
DLLM+++ L+LL +H+D TN+ R C YL++ A Y+ P+ ++ + Y+KF EYP
Sbjct: 200 VDLLMDVEDLDLLLEHVDNTNFRRTCNYLTSAAKYLPGPDDMLVLDIAYMIYIKFAEYPN 259
Query: 243 ALTLALQLNDEPSVLKIFQLCEDPVVRKQLAYMAGRQQITIELPDEM----PDKNDLQII 298
AL +AL L++ V ++F C D V +KQ YM R +T EL EM DK LQ I
Sbjct: 260 ALQIALFLDNMQYVKQVFTSCTDLVKKKQFCYMIARHGMTFELDQEMVANDEDKEALQDI 319
Query: 299 MTNSHINDHFHSLARELDIMEPKTPEEVYKTWLENIVLRPTYNLDVPVDSARHNLASTFV 358
+ NS +++ + +LAR++++ME KTPE++YK L L + VDSAR NL++TFV
Sbjct: 320 VNNSKLSEGYLTLARDIEVMEAKTPEDIYKAHL----LDGRASSGPSVDSARQNLSATFV 375
Query: 359 NAFVNAGFSRDKLVSVED-------GNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPI 411
NAFVNAGF +DKL++V GN W++KNK+HG SA ASLG+I LWDV+ GL +
Sbjct: 376 NAFVNAGFGQDKLMTVPSDSTSGSAGN-WLFKNKEHGKTSAVASLGMIQLWDVETGLGHL 434
Query: 412 DKYLYTSEDYIKAGALLALGIVNCGVRNECDPALALLSDYVLNDSITLRIXXXXXXXXXX 471
DKY +++++ + AGALL +GIVNCG++N+CDPA ALLS Y+ N+ ++RI
Sbjct: 435 DKYFHSNDNPVVAGALLGVGIVNCGIKNDCDPAFALLSGYIDNEDSSVRIGAIMGLGIAY 494
Query: 472 XXTKRQEVVTLLLPVLTDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSE 531
++ ++ L P+L D + +V+AFAA++ +IYVG+ EVA +I+ L++ +E
Sbjct: 495 AGSQNDQIKIRLSPILNDANAPLDVIAFAALSLGMIYVGSCNEEVAQSIIFALMDRSEAE 554
Query: 532 LQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLV 591
L + +RFLPL L + YLGK+++++ T + + R M L CAYAG+G+VL
Sbjct: 555 LGEA-LTRFLPLGLGLLYLGKQESVEATAEVSKTFNEKIRKYCDMTLLSCAYAGTGNVLK 613
Query: 592 VQEFLHVCSEH 602
VQ+ L C EH
Sbjct: 614 VQDLLAQCGEH 624
Score = 739 (265.2 bits), Expect = 4.4e-202, Sum P(2) = 4.4e-202
Identities = 140/239 (58%), Positives = 188/239 (78%)
Query: 670 EEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAH 729
EE+G +M R ++ +YGE +RRAVPLA+ L +SNP + V+D L++ SHD D EVA
Sbjct: 646 EELGLDMEIRSLERVLQYGEQNIRRAVPLALGLLCISNPKVTVMDTLSRLSHDTDSEVAM 705
Query: 730 NAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHT 789
AI S+GL+GAGTNNAR+A MLR L+ Y+ K+ LF VRIAQG HMGKG ++L+PFH+
Sbjct: 706 AAIISLGLIGAGTNNARIAGMLRNLSSYYYKDASLLFCVRIAQGFVHMGKGLLTLNPFHS 765
Query: 790 DRQILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAMYPRWLVTLDENQEPVSVS 849
+R +L+P ALAG++ +L + LD K+IILGK HY+LY LV AM PR ++T+D++ +P+SV
Sbjct: 766 ERLLLSPTALAGIVTLLHACLDMKSIILGKYHYVLYFLVLAMQPRMMLTVDQSLKPISVP 825
Query: 850 VRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDDYVPLTPVMEGFVILRK 908
VRVGQAVDV+G+AG PKTI G TH+TPVLLA GERAELAT+ Y+PL+P++EGFVIL++
Sbjct: 826 VRVGQAVDVVGQAGRPKTITGFQTHSTPVLLAAGERAELATEKYIPLSPILEGFVILKE 884
>DICTYBASE|DDB_G0293752 [details] [associations]
symbol:psmD2 "26S proteasome non-ATPase regulatory
subunit 2" species:44689 "Dictyostelium discoideum" [GO:0006972
"hyperosmotic response" evidence=IEP] [GO:0050790 "regulation of
catalytic activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 dictyBase:DDB_G0293752
INTERPRO:IPR002015 GO:GO:0005634 GO:GO:0030234
GenomeReviews:CM000155_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0006972 GO:GO:0004175
GO:GO:0006511 GO:GO:0042176 EMBL:AAFI02000219 GO:GO:0005838
Pfam:PF01851 eggNOG:COG5110 KO:K03028 PANTHER:PTHR10943:SF1
RefSeq:XP_628968.1 STRING:Q54BC6 PRIDE:Q54BC6
EnsemblProtists:DDB0232978 GeneID:8629396 KEGG:ddi:DDB_G0293752
OMA:QWNINEG ProtClustDB:CLSZ2429221 Uniprot:Q54BC6
Length = 893
Score = 1157 (412.3 bits), Expect = 1.7e-191, Sum P(2) = 1.7e-191
Identities = 237/596 (39%), Positives = 370/596 (62%)
Query: 10 KDEKVTKGKGEKNPDEMSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMRDLIRXXXXX 69
KD K K K +K + +S ED++L+ DL +LVE+ + + + L ALE+++ IR
Sbjct: 40 KDNKKDKKK-DKKEETLSPEDEKLKNDLELLVERSRDEKEEIALAALEALKTEIRSSTSS 98
Query: 70 XXXVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQDNVEQECLKYCLMAK 129
VP PLKFLRNHY L + + + K K L I+SVLAM+ N E++ LKY L+
Sbjct: 99 MTSVPKPLKFLRNHYSTLVDIYKNSKEGKAKTSLADILSVLAMANGNDERDTLKYKLLGS 158
Query: 130 QKDVGDWGHEYVRQLEAEIAEEWATNKYEKPQ---LLELIEDIIQFDMKHNAEIQACDLL 186
+ + WGHEYV+ L EI E+ K E LL+L+++I+ F M HNAE +ACDLL
Sbjct: 159 GEAIASWGHEYVKHLATEIGVEYDIKKEENQSVEDLLKLVDEIVPFQMTHNAEPEACDLL 218
Query: 187 MEIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEPERSVITNGVLNNYLKFKEYPRALTL 246
+E++ L + +++D NY RVCLYL C+ YV P+ I + Y+K K+YP AL +
Sbjct: 219 LEVEQLSKIFQYIDENNYSRVCLYLFKCSYYVPGPDDINILKVCVEIYIKMKQYPDALRV 278
Query: 247 ALQLNDEPSVLKIFQLCED-PVVRKQLAYMAGRQQITIELPDEMPDKNDLQIIMTNSHIN 305
A++++D + +IF+L E+ + +QL ++ RQ+I +PD + + + I+ NS ++
Sbjct: 279 AMKISDPELITEIFKLVENNKSILQQLGFLVARQKI---VPDNF-NYDSISDIINNSKLS 334
Query: 306 DHFHSLARELDIMEPKTPEEVYKTWLENIVLRPTYNLDVPVDSARHNLASTFVNAFVNAG 365
++F +LA +LDI EPK PEE++++ L++ DSAR NLAS+FVNAFVNAG
Sbjct: 335 EYFMNLATDLDIREPKLPEEIFQSHLDST--------SAIADSARMNLASSFVNAFVNAG 386
Query: 366 FSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYLYTSEDYIKAG 425
F +DKL++ E+ KW +KN++ G+LS AS G++ LWD+DGGLT IDK+LY+ E + G
Sbjct: 387 FGKDKLMTAEEDTKWWFKNRELGILSTVASTGMVVLWDIDGGLTKIDKFLYSQEKHCSNG 446
Query: 426 ALLALGIVNCGVRNECDPALALLSDYVLNDSITLRIXXXXXXXXXXXXTKRQEVVTLLLP 485
AL+A+G++ G+R+E DPAL+LL++++ + + RI T+RQ++++LL P
Sbjct: 447 ALMAIGMLTSGIRSEMDPALSLLAEHINSSNTGTRISAIFGLGLAYAGTQRQDLMSLLSP 506
Query: 486 VLTDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSELQDGHYSRFLPLAL 545
L D K E + +A LI++G+ E+++ +QTLI+ + + H +RFL L L
Sbjct: 507 CLDDDKEKMEFIGIVGLALGLIFIGSCDPELSTLFVQTLIQRGTAA-SESH-ARFLHLGL 564
Query: 546 AITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLVVQEFLHVCSE 601
+ YLGK+DA + L L+ + A++ ++ CAYAG+G+VL VQ LH CS+
Sbjct: 565 GLLYLGKQDAAELALETLKAIEGKGGEYARLTVEACAYAGTGNVLKVQNMLHFCSD 620
Score = 721 (258.9 bits), Expect = 1.7e-191, Sum P(2) = 1.7e-191
Identities = 137/238 (57%), Positives = 185/238 (77%)
Query: 670 EEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAH 729
EE+GS+M R+F L + G ++RA+PLA+ L S SNP + ++D+L+K SHD D EVA
Sbjct: 641 EELGSDMCLRMFDHLLQKGNVHIKRAIPLALGLLSPSNPRIAIMDILSKLSHDNDPEVAQ 700
Query: 730 NAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHT 789
AI S+GL+GAGTNNAR+ MLR LA ++ K+ HLF VRIAQGL H+GKGT++++P+H+
Sbjct: 701 GAILSLGLIGAGTNNARIGGMLRALAVFYGKDV-HLFFVRIAQGLLHLGKGTMTINPYHS 759
Query: 790 DRQILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAMYPRWLVTLDENQEPVSVS 849
DR +++PVA+ GLL +L + LD KNI+ +SHYL + +V +MYPR L+TLDE+ +P+ VS
Sbjct: 760 DRTLMSPVAVGGLLALLHAGLDIKNILSTQSHYLFFSIVCSMYPRMLMTLDEDLKPLPVS 819
Query: 850 VRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDDYVPLTPVMEGFVILR 907
VRVGQ+VD++G AG PKTI G THTTPVLL ERAELATDDY+PLT ++EG VIL+
Sbjct: 820 VRVGQSVDIVGLAGKPKTITGFQTHTTPVLLGYNERAELATDDYIPLTNILEGIVILK 877
>ASPGD|ASPL0000062698 [details] [associations]
symbol:AN10020 species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016643
PIRSF:PIRSF015965 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
EMBL:BN001308 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
Pfam:PF01851 OMA:IAQGLTH PANTHER:PTHR10943:SF1
EnsemblFungi:CADANIAT00002622 Uniprot:C8VQJ9
Length = 906
Score = 1090 (388.8 bits), Expect = 6.5e-188, Sum P(2) = 6.5e-188
Identities = 236/607 (38%), Positives = 364/607 (59%)
Query: 9 DKDEKVTKGKGEKNPDE-----MSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMRDLI 63
+K E+ T+G G+K DE +SEED++L+ +L MLVE+++ D LY PAL++++ I
Sbjct: 29 EKPEEKTQGNGKKKDDEPQEEELSEEDQQLKSELEMLVERLQEPDTSLYGPALDAIKTFI 88
Query: 64 RXXXXXXXXVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQDNVEQ-ECL 122
+ VP PLKFLR HY L +K + K L ++SVL M+ + E+ E L
Sbjct: 89 KTSTSSMTAVPKPLKFLRPHYDDLAALYDKWSAGATKDSLADMLSVLGMTYGDEEKLETL 148
Query: 123 KYCLMAKQKDVGDWGHEYVRQLEAEIAEEW---ATNKYEKPQLLELIEDIIQFDMKHNAE 179
KY L+ K D+G WGHEYVR L EI +E+ ++ E L++L ++ + ++HNAE
Sbjct: 149 KYRLLTKSDDLGSWGHEYVRHLALEIGQEYQNRVNDEKEVDDLIKLAVSLVPYFLRHNAE 208
Query: 180 IQACDLLMEIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEPERSVITNGVLNNYLKFKE 239
A DL+ E++ +E + + +D Y RVCLY+ + + PE Y+++KE
Sbjct: 209 ADAVDLMSELEIIEEIPQFVDENTYSRVCLYMVSMVPLLTYPEDHQFLRTAHEIYVRYKE 268
Query: 240 YPRALTLALQLNDEPSVLKIFQLCEDPVVRKQLAYMAGRQQITIE-LPDEMPDKNDLQII 298
+A+ LA++LND + + D ++KQ+A++ RQQI ++ L D+ D+ ++ +
Sbjct: 269 LTKAIVLAIRLNDVDLIKSDLEATSDRSLKKQMAFLVSRQQIWLDDLGDDEQDETFMECL 328
Query: 299 MTNSHINDHFHSLARELDIMEPKTPEEVYKTWLENIVLRPTYNLDVPVDSARHNLASTFV 358
N+ I HF SL +EL+I++P PE++YKT LE+ N VDSARHNLAS FV
Sbjct: 329 -NNTSIPKHFKSLGKELNILDPIMPEDIYKTHLESSRGAGLTN----VDSARHNLASAFV 383
Query: 359 NAFVNAGFSRDKLVSVE-DGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYLYT 417
NAF NAGF D+++ VE D W++K K GMLS AS+G++ DVD GL IDKY Y
Sbjct: 384 NAFANAGFGNDEMMIVEGDKGSWVWKTKDDGMLSTTASMGMLLHRDVDTGLDKIDKYTYA 443
Query: 418 SEDYIKAGALLALGIVNCGVRNECDPALALLSDY--VLNDSITLRIXXXXXXXXXXXXTK 475
SED IKAGALL++GI+N GVR + DPALALL D + +I +R+ +
Sbjct: 444 SEDQIKAGALLSIGILNSGVRLDSDPALALLCDNENLEAKNIPMRVATIMGLGLAYAGSN 503
Query: 476 RQEVVTLLLPVLTDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLI-ELPVSELQD 534
+QE++ LLP++ D ++ A AAV+ L++VG+ H+V+ AI TL+ E +L+D
Sbjct: 504 KQEILDALLPIVEDVSLDMQLSAMAAVSLGLVFVGSSNHQVSEAIATTLMDEERQKQLKD 563
Query: 535 GHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLVVQE 594
++RF+ L LA+ Y G+++ +D L L+ + P ++ +CA+AG+G VL +QE
Sbjct: 564 -KWTRFMALGLALLYFGRQEEVDVILDILKAVDHPMAKPTSVLASVCAWAGTGTVLKLQE 622
Query: 595 FLHVCSE 601
LH+C++
Sbjct: 623 LLHICND 629
Score = 754 (270.5 bits), Expect = 6.5e-188, Sum P(2) = 6.5e-188
Identities = 146/239 (61%), Positives = 184/239 (76%)
Query: 670 EEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAH 729
E++G +M R FG L YG +R+AVPLA+ L S SNP + V D L++YSHD D +VA
Sbjct: 658 EDVGQDMILRQFGHLMHYGASNIRKAVPLAMGLISPSNPQMKVYDTLSRYSHDNDNDVAI 717
Query: 730 NAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHT 789
NAIF+MGL GAGT N+RLA +LRQLA Y+ ++ LFMVRIAQGL HMGKGT++L+PFHT
Sbjct: 718 NAIFAMGLCGAGTKNSRLAQLLRQLASYYHRDQNSLFMVRIAQGLLHMGKGTMTLNPFHT 777
Query: 790 DRQILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAMYPRWLVTLDENQEPVSVS 849
DRQ+L+ V+ AGLL VL S +D K IL + HYLLY L+ AMYPR+LVTLDE+ +P+ V+
Sbjct: 778 DRQVLSRVSAAGLLTVLVSLIDAKQFILAEHHYLLYFLITAMYPRFLVTLDEDLQPLPVN 837
Query: 850 VRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDDYVPLTPVMEGFVILRK 908
VRVGQAVDV+G+AG PKTI G T +TPVLL+ GERAEL + Y+PL+ +EG VILRK
Sbjct: 838 VRVGQAVDVVGQAGRPKTITGWQTQSTPVLLSYGERAELEDEKYIPLSSTLEGLVILRK 896
>POMBASE|SPBP19A11.03c [details] [associations]
symbol:mts4 "19S proteasome regulatory subunit Mts4"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR016024 InterPro:IPR016643 PIRSF:PIRSF015965
PomBase:SPBP19A11.03c INTERPRO:IPR002015 GO:GO:0005829
GO:GO:0005634 GO:GO:0007346 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0043161 EMBL:CU329671 GO:GO:0050790 GenomeReviews:CU329671_GR
GO:GO:0042176 GO:GO:0008540 Pfam:PF01851 eggNOG:COG5110
HOGENOM:HOG000176022 KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1
EMBL:Y09819 PIR:T52488 RefSeq:NP_596171.1 ProteinModelPortal:P87048
IntAct:P87048 STRING:P87048 EnsemblFungi:SPBP19A11.03c.1
GeneID:2541268 KEGG:spo:SPBP19A11.03c OrthoDB:EOG4P8JSC
NextBio:20802380 Uniprot:P87048
Length = 891
Score = 1124 (400.7 bits), Expect = 3.6e-187, Sum P(2) = 3.6e-187
Identities = 238/597 (39%), Positives = 365/597 (61%)
Query: 11 DEKVTKGKGEKNP-DEMSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMRDLIRXXXXX 69
D T E++ +++SEED +L+ DL +LV+ ++ + L +L ++++IR
Sbjct: 30 DRNSTNNTKERDELEDLSEEDLQLKNDLELLVQAVQDATPELVGSSLTQLKEIIRTSTSS 89
Query: 70 XXXVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQDNVEQ-ECLKYCLMA 128
VP PLKFLR HY L + + K L I+SVL MS N + E LKY L
Sbjct: 90 MTAVPKPLKFLRPHYFTLVKIYDSWPQSPQKTQLADILSVLGMSYSNTSKHESLKYRLQG 149
Query: 129 KQKDVGDWGHEYVRQLEAEIAEEWATNKYEK-P--QLLELIEDIIQFDMKHNAEIQACDL 185
D WGHEYVR L +EI EE+A+ + E+ P L+EL I+ F + HNAE A DL
Sbjct: 150 VTTDPSLWGHEYVRHLASEIEEEFASRQEEEAPTDDLMELALTIVPFFLTHNAEADAIDL 209
Query: 186 LMEIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEPERSVITNGVLNNYLKFKEYPRALT 245
L E+ +E + +++ N RVCLY+++C + PE + Y KF + +AL
Sbjct: 210 LQELGAIEKVVPFVELDNASRVCLYITSCVNLLPFPEDVAMLRTAHAIYRKFDQLTQALN 269
Query: 246 LALQLNDEPSVLKIFQLCEDPVVRKQLAYMAGRQQITIELPDEMPDKNDLQIIMTNSHIN 305
+A++L+D + + + DP+++KQ++YM RQQI +++ DE + ND + N+H++
Sbjct: 270 VAIRLDDMSLIKEDCEAATDPLLKKQMSYMLARQQIPMDMGDE--ELNDA---LNNTHLS 324
Query: 306 DHFHSLARELDIMEPKTPEEVYKTWLENIVLRPTYNLDVPVDSARHNLASTFVNAFVNAG 365
DHFH L +EL++M+PK PE+++KT LE V R V SA+ NLA+TFVNA VNAG
Sbjct: 325 DHFHYLGKELNLMDPKVPEDIFKTHLE--VARTGLGAS-GVYSAKQNLANTFVNALVNAG 381
Query: 366 FSRDKLVSVEDGN-KWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYLYTSEDYIKA 424
+S D+L+ V+D W+YKNK+ G++SA AS+GL+ LW+VD GL+ +DKYLY+SE+ KA
Sbjct: 382 YSNDRLILVDDEKTSWIYKNKESGLISATASIGLLQLWNVDMGLSLLDKYLYSSEENTKA 441
Query: 425 GALLALGIVNCGVRNECDPALALLSDYVLNDSITLRIXXXXXXXXXXXXTKRQEVVTLLL 484
GALL +G+ N VRNE DPA+A+LS+Y+ S+ LR R++++ +L
Sbjct: 442 GALLGIGVTNVAVRNEADPAMAILSEYLETGSVKLRASAILGLGLAYSGANREDLLDMLS 501
Query: 485 PVLTDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSELQDGHYSRFLPLA 544
P++TD ++ AA++ LI+VGT +VAS ILQTL+E S Q+ + RF+ L
Sbjct: 502 PIVTDTDCPMQLSCLAALSLGLIFVGTCNGDVASTILQTLMEREESA-QNDQWGRFMALG 560
Query: 545 LAITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLVVQEFLHVCSE 601
LA+ + GK+D D T+ L+ + A++++ +C+YAG+G+VL +Q+ LH+CSE
Sbjct: 561 LALLFNGKQDLADATVETLKAIEGKIARQAEILVDICSYAGTGNVLHIQKLLHICSE 617
Score = 713 (256.0 bits), Expect = 3.6e-187, Sum P(2) = 3.6e-187
Identities = 141/260 (54%), Positives = 187/260 (71%)
Query: 653 SSMQXXXXXXXXXXXXXEEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNV 712
+++Q E+IG+EM R F + YGEP++R+A+PLA+ L S SNP + +
Sbjct: 628 TTIQTFAALGVATIAMGEDIGAEMVLRHFDHMMHYGEPSIRKAIPLALGLLSASNPQMRI 687
Query: 713 IDVLNKYSHDLDEEVAHNAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQ 772
D L++YSHD D +VA+NAIF+MGLVGAGT+NARLA +LRQLA Y+ K + LFMVRIAQ
Sbjct: 688 FDTLSRYSHDNDLDVAYNAIFAMGLVGAGTSNARLAQLLRQLASYYHKESNALFMVRIAQ 747
Query: 773 GLTHMGKGTVSLSPFHTDRQILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAMY 832
GL ++GKGT++L+P+HT+RQIL A AGL+ V+ + LD +L SH+LLY + A+
Sbjct: 748 GLLYLGKGTMTLNPYHTERQILGQTAFAGLMTVVLAMLDANTFVLDTSHWLLYAITLAIR 807
Query: 833 PRWLVTLDENQEPVSVSVRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDD 892
PR L+TL E+ + + VSVRVGQAVDV+G+AG PK I G THTTPVLL ERAELAT+
Sbjct: 808 PRMLITLGEDGQYLPVSVRVGQAVDVVGQAGRPKVITGWVTHTTPVLLHHNERAELATEA 867
Query: 893 YVPLTPVMEGFVILRKKDKD 912
Y PLT +EG VIL+K +D
Sbjct: 868 YTPLTS-LEGIVILKKNTED 886
>UNIPROTKB|F1P4P8 [details] [associations]
symbol:PSMD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 Pfam:PF01851 GeneTree:ENSGT00550000074983 OMA:IAQGLTH
PANTHER:PTHR10943:SF1 EMBL:AADN02020694 IPI:IPI00592623
Ensembl:ENSGALT00000039840 ArrayExpress:F1P4P8 Uniprot:F1P4P8
Length = 733
Score = 1564 (555.6 bits), Expect = 3.7e-183, Sum P(2) = 3.7e-183
Identities = 314/589 (53%), Positives = 414/589 (70%)
Query: 19 GEKNPDEMSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMRDLIRXXXXXXXXVPMPLK 78
G + E+SEEDK+LQ++L MLVE++ D LY PALE +R IR VP PLK
Sbjct: 38 GPEKEQELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLK 97
Query: 79 FLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQDNVEQECLKYCLMAKQKDVGDWGH 138
FLR HYG LKE E M + K+ IISVLAM+ E+ECLKY L+ Q+++ WGH
Sbjct: 98 FLRPHYGKLKEIYENMAPGENKRFAADIISVLAMTMSG-ERECLKYRLVGSQEELASWGH 156
Query: 139 EYVRQLEAEIAEEWA----TNKYEKPQLLELIEDIIQFDMKHNAEIQACDLLMEIDHLEL 194
EYVR L E+A+EW +K ++ LL L+++I+ ++M HNAE +ACDLLMEI+ +++
Sbjct: 157 EYVRHLAGEVAKEWQEIDEADKAQRDTLLTLVKEIVPYNMAHNAEHEACDLLMEIEQMDM 216
Query: 195 LDKHMDVTNYPRVCLYLSNCALYVEEPERSVITNGVLNNYLKFKEYPRALTLALQLNDEP 254
L+K++D Y +VCLYL++C YV EPE S + L + KF YP AL LAL LND
Sbjct: 217 LEKYIDDNAYSKVCLYLTSCVSYVPEPENSALLRCALGIFRKFNRYPEALRLALMLNDVE 276
Query: 255 SVLKIFQLCEDPVVRKQLAYMAGRQQITIELPDEMPDKNDLQIIMTNSHINDHFHSLARE 314
V IF C+D VV+KQ+A+M GR + +EL +++ + DL IM+N +N +F +LARE
Sbjct: 277 LVEDIFTSCKDVVVQKQMAFMLGRHGVFLELNEDVEEYEDLTEIMSNVQLNSNFLALARE 336
Query: 315 LDIMEPKTPEEVYKTWLENIVLRPTYNLDVPVDSARHNLASTFVNAFVNAGFSRDKLVSV 374
LDIMEPK P+++YKT LEN + + VDSAR NLAS+FVN FVNA F +DKL++
Sbjct: 337 LDIMEPKVPDDIYKTHLENNRFGGSGS---QVDSARMNLASSFVNGFVNAAFGQDKLLT- 392
Query: 375 EDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYLYTSEDYIKAGALLALGIVN 434
+DGNKW+YKNK HGMLSAAASLG I LWDVDGGLT IDKYLY+SEDYIK+GALLA GIVN
Sbjct: 393 DDGNKWLYKNKDHGMLSAAASLGTILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVN 452
Query: 435 CGVRNECDPALALLSDYVLNDSITLRIXXXXXXXXXXXXTKRQEVVTLLLPVLTDRKSTP 494
GVRNECDPALALLSDYVL++S T+RI + R++V+TLLLPV+ D KS+
Sbjct: 453 SGVRNECDPALALLSDYVLHNSNTMRIGAIFGLGLAYAGSNREDVLTLLLPVMGDSKSSM 512
Query: 495 EVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSELQDGHYSRFLPLALAITYLGKKD 554
EV A+A +I VG+ +V S ILQT++E +EL++ Y+R+LPL L + +LGK +
Sbjct: 513 EVAGVTALACGMISVGSCNGDVTSTILQTIMEKSETELKET-YARWLPLGLGLNHLGKGE 571
Query: 555 AIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLVVQEFLHVCSEHY 603
AI+ LAALEV+ +PFRS A ++ +CAYAGSG+VL VQ+ LH+CSEH+
Sbjct: 572 AIEAILAALEVVSEPFRSFANTLVDICAYAGSGNVLKVQQLLHICSEHF 620
Score = 235 (87.8 bits), Expect = 3.7e-183, Sum P(2) = 3.7e-183
Identities = 46/72 (63%), Positives = 61/72 (84%)
Query: 670 EEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAH 729
EEIG+EM+ R FG L RYGEPT+RRAVPLA+AL S+SNP LN++D L+K+ HD D EV++
Sbjct: 664 EEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKF-HDADPEVSY 722
Query: 730 NAIFSMGLVGAG 741
N+IF +G+VG+G
Sbjct: 723 NSIF-VGMVGSG 733
>CGD|CAL0006334 [details] [associations]
symbol:RPN1 species:5476 "Candida albicans" [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] [GO:0030674 "protein binding, bridging"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 CGD:CAL0006334
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 GO:GO:0050790
GO:GO:0000502 EMBL:AACQ01000010 GO:GO:0042176 Pfam:PF01851
eggNOG:COG5110 KO:K03028 PANTHER:PTHR10943:SF1 RefSeq:XP_722167.1
STRING:Q5AL21 GeneID:3636147 KEGG:cal:CaO19.4956 Uniprot:Q5AL21
Length = 994
Score = 999 (356.7 bits), Expect = 2.0e-171, Sum P(2) = 2.0e-171
Identities = 214/606 (35%), Positives = 349/606 (57%)
Query: 10 KDEKVTKGKGEK--NPDEMSEEDKRLQEDLNMLVEKIK--GSDKHLYLPALESMRDLIRX 65
KD++ TK K +E+SEED+ L+++L +LVE++ D+ LY L++++ I+
Sbjct: 18 KDQQPTKSDKSKVQKEEELSEEDQHLKDELELLVERLNEPNQDRALYNKYLDALKTFIKE 77
Query: 66 XXXXXXXVPMPLKFLRNHYGALKEACEKMTDQKPKK-----LLCSIISVLAMS-QDNVEQ 119
VP PLKFLR HY +L E ++Q K L I+SVLA + D +
Sbjct: 78 STTSMTAVPKPLKFLRPHYPSLTELYTNWSNQFSAKDVIVIKLADILSVLATTYSDEGNR 137
Query: 120 ECLKYCLMAKQKDVGDWGHEYVRQLEAEIAEEWATNKYEKPQLL-ELIE---DIIQFDMK 175
+ LKY L+A + DWGHEY+R L EI E + N +L+ +L++ I+ F +K
Sbjct: 138 DSLKYRLLASDDTISDWGHEYMRHLALEIGESFQENLGVDEELVNKLVKLALQIVPFFLK 197
Query: 176 HNAEIQACDLLMEIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEPERSVITNGVLNNYL 235
HNAE A DLL+EI+ ++ L + +D + RVCLY+++C Y+ P+ N + YL
Sbjct: 198 HNAEADAVDLLLEIECIDKLPQFVDENTFARVCLYVTSCVPYLAPPDDVSFLNTAYSIYL 257
Query: 236 KFKEYPRALTLALQLNDEPSVLKIFQLCEDPVVRKQLAYMAGRQQITIELPDEMPDKNDL 295
+ +ALTLA++L+D + ++F D + KQL ++ +Q + P E P+ +
Sbjct: 258 SHNQLTQALTLAIKLDDNELIKQVFDSTTDESLHKQLGFILSQQNSNFKYPGENPE---V 314
Query: 296 QIIMTNSHINDHFHSLARELDIMEPKTPEEVYKTWLENIVLRPTYNLDVPVDSARHNLAS 355
Q ++N + ++F L +EL++++PK PE+VYK+ LEN +DSA+ NLA+
Sbjct: 315 QECISNVKLAEYFQYLVKELNLLDPKVPEDVYKSHLENSKFG--LGTSGSIDSAKQNLAA 372
Query: 356 TFVNAFVNAGFSRDKLVSVEDGNK-WMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKY 414
+FVN F+N GF DKLV E+ NK W+Y+ K GM S ASLG I+ W+++ GL +DKY
Sbjct: 373 SFVNGFLNLGFGNDKLVQTEEDNKSWIYRTKGSGMASTTASLGSIHQWNINEGLQVLDKY 432
Query: 415 LYTSEDYIKAGALLALGIVNCGVRNECDPALALLSDYVLNDSITLRIXXXXXXXXXXXXT 474
Y+ + +KAGALL G+V+ V +E D A ALL +YV + + +
Sbjct: 433 TYSEDSEVKAGALLGTGVVSANVHDEVDAAFALLQEYVHEPNKLYQTAAINGLGIAFAGS 492
Query: 475 KRQEVVTLLLPVLTDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSELQD 534
++V+ LLLP+++D + E+ AA+A I+VGT + +V S ILQTL+E ++L +
Sbjct: 493 ANEDVLNLLLPLVSDLDISLEISCLAALALGHIFVGTCHGDVTSTILQTLLERDYTQLTN 552
Query: 535 GHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLVVQE 594
+ +F+ L L + Y+G+ + + L ++ + P K+++ +CA+AG+G+VL +Q
Sbjct: 553 -KFIKFMSLGLGLLYMGRTEQAEDVLETIDAIEHPISKTLKVLVNICAFAGTGNVLQIQA 611
Query: 595 FLHVCS 600
L +C+
Sbjct: 612 LLQMCT 617
Score = 689 (247.6 bits), Expect = 2.0e-171, Sum P(2) = 2.0e-171
Identities = 140/245 (57%), Positives = 183/245 (74%)
Query: 670 EEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAH 729
E+IG +MS R FG L YG +RRAVPLA+ L S SNP + V + L++YSHD D EVA
Sbjct: 741 EDIGQDMSLRHFGHLMHYGNSLIRRAVPLAMGLVSTSNPQMKVFETLSRYSHDPDLEVAQ 800
Query: 730 NAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHT 789
N+I+SMGLVGAGTNNARLA +LRQLA Y++K+ LFMVRIAQG+ H+GKGT++L+P+++
Sbjct: 801 NSIYSMGLVGAGTNNARLAQLLRQLASYYIKSPDTLFMVRIAQGILHLGKGTLTLTPYNS 860
Query: 790 DRQILNPVALAGLLVVLTSFLDTKNIILGKS-----HYLLYCLVPAMYPRWLVTLDENQE 844
+R IL+ V+LA LL + + LD ++ IL S H LLY L PA+ PR LVT+DE +
Sbjct: 861 ERTILSKVSLASLLTIAIALLDPRSFILNDSTTETTHQLLYYLTPAVKPRMLVTVDEELK 920
Query: 845 PVSVSVRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELA-TDDYVPLTPVMEGF 903
P+ V+VRVGQAVDV+G+AG PKTI G T +TPVLL GERAEL TD+++ L+ +EG
Sbjct: 921 PIKVNVRVGQAVDVVGQAGKPKTITGWVTQSTPVLLNYGERAELENTDEWISLSSSLEGV 980
Query: 904 VILRK 908
VIL+K
Sbjct: 981 VILKK 985
Score = 47 (21.6 bits), Expect = 2.2e-70, Sum P(2) = 2.2e-70
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 11 DEKVTKGKGEKNPDEMSEEDKRLQEDLNML 40
DEK +G +K +E +E++ L + + +L
Sbjct: 703 DEKAQEGGDDKEDEEEIDEEEELYQGIAVL 732
>UNIPROTKB|E1BX02 [details] [associations]
symbol:PSMD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 Pfam:PF01851
GeneTree:ENSGT00550000074983 PANTHER:PTHR10943:SF1
EMBL:AADN02020694 IPI:IPI00821592 Ensembl:ENSGALT00000010167
ArrayExpress:E1BX02 Uniprot:E1BX02
Length = 685
Score = 1564 (555.6 bits), Expect = 5.6e-167, Sum P(2) = 5.6e-167
Identities = 314/589 (53%), Positives = 414/589 (70%)
Query: 19 GEKNPDEMSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMRDLIRXXXXXXXXVPMPLK 78
G + E+SEEDK+LQ++L MLVE++ D LY PALE +R IR VP PLK
Sbjct: 38 GPEKEQELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLK 97
Query: 79 FLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQDNVEQECLKYCLMAKQKDVGDWGH 138
FLR HYG LKE E M + K+ IISVLAM+ E+ECLKY L+ Q+++ WGH
Sbjct: 98 FLRPHYGKLKEIYENMAPGENKRFAADIISVLAMTMSG-ERECLKYRLVGSQEELASWGH 156
Query: 139 EYVRQLEAEIAEEWA----TNKYEKPQLLELIEDIIQFDMKHNAEIQACDLLMEIDHLEL 194
EYVR L E+A+EW +K ++ LL L+++I+ ++M HNAE +ACDLLMEI+ +++
Sbjct: 157 EYVRHLAGEVAKEWQEIDEADKAQRDTLLTLVKEIVPYNMAHNAEHEACDLLMEIEQMDM 216
Query: 195 LDKHMDVTNYPRVCLYLSNCALYVEEPERSVITNGVLNNYLKFKEYPRALTLALQLNDEP 254
L+K++D Y +VCLYL++C YV EPE S + L + KF YP AL LAL LND
Sbjct: 217 LEKYIDDNAYSKVCLYLTSCVSYVPEPENSALLRCALGIFRKFNRYPEALRLALMLNDVE 276
Query: 255 SVLKIFQLCEDPVVRKQLAYMAGRQQITIELPDEMPDKNDLQIIMTNSHINDHFHSLARE 314
V IF C+D VV+KQ+A+M GR + +EL +++ + DL IM+N +N +F +LARE
Sbjct: 277 LVEDIFTSCKDVVVQKQMAFMLGRHGVFLELNEDVEEYEDLTEIMSNVQLNSNFLALARE 336
Query: 315 LDIMEPKTPEEVYKTWLENIVLRPTYNLDVPVDSARHNLASTFVNAFVNAGFSRDKLVSV 374
LDIMEPK P+++YKT LEN + + VDSAR NLAS+FVN FVNA F +DKL++
Sbjct: 337 LDIMEPKVPDDIYKTHLENNRFGGSGS---QVDSARMNLASSFVNGFVNAAFGQDKLLT- 392
Query: 375 EDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYLYTSEDYIKAGALLALGIVN 434
+DGNKW+YKNK HGMLSAAASLG I LWDVDGGLT IDKYLY+SEDYIK+GALLA GIVN
Sbjct: 393 DDGNKWLYKNKDHGMLSAAASLGTILLWDVDGGLTQIDKYLYSSEDYIKSGALLACGIVN 452
Query: 435 CGVRNECDPALALLSDYVLNDSITLRIXXXXXXXXXXXXTKRQEVVTLLLPVLTDRKSTP 494
GVRNECDPALALLSDYVL++S T+RI + R++V+TLLLPV+ D KS+
Sbjct: 453 SGVRNECDPALALLSDYVLHNSNTMRIGAIFGLGLAYAGSNREDVLTLLLPVMGDSKSSM 512
Query: 495 EVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSELQDGHYSRFLPLALAITYLGKKD 554
EV A+A +I VG+ +V S ILQT++E +EL++ Y+R+LPL L + +LGK +
Sbjct: 513 EVAGVTALACGMISVGSCNGDVTSTILQTIMEKSETELKET-YARWLPLGLGLNHLGKGE 571
Query: 555 AIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLVVQEFLHVCSEHY 603
AI+ LAALEV+ +PFRS A ++ +CAYAGSG+VL VQ+ LH+CSEH+
Sbjct: 572 AIEAILAALEVVSEPFRSFANTLVDICAYAGSGNVLKVQQLLHICSEHF 620
Score = 82 (33.9 bits), Expect = 5.6e-167, Sum P(2) = 5.6e-167
Identities = 16/22 (72%), Positives = 18/22 (81%)
Query: 670 EEIGSEMSTRIFGQLGRYGEPT 691
EEIG+EM+ R FG L RYGEPT
Sbjct: 664 EEIGAEMALRTFGHLLRYGEPT 685
>SGD|S000001069 [details] [associations]
symbol:RPN1 "Base subunit of the 19S regulatory particle of
the 26S proteasome" species:4932 "Saccharomyces cerevisiae"
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0030674
"protein binding, bridging" evidence=IPI] [GO:0004175
"endopeptidase activity" evidence=TAS] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=TAS] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=IEA] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 SGD:S000001069
INTERPRO:IPR002015 GO:GO:0005783 GO:GO:0005634 GO:GO:0030234
SUPFAM:SSF48371 EMBL:BK006934 GO:GO:0050790 GO:GO:0006511
GO:GO:0042176 EMBL:U10399 GO:GO:0034515 GO:GO:0008540 Pfam:PF01851
eggNOG:COG5110 GeneTree:ENSGT00550000074983 HOGENOM:HOG000176022
KO:K03028 OMA:IAQGLTH PANTHER:PTHR10943:SF1 OrthoDB:EOG4P8JSC
PIR:S46779 RefSeq:NP_011892.1 ProteinModelPortal:P38764
DIP:DIP-2876N IntAct:P38764 MINT:MINT-707867 STRING:P38764
PaxDb:P38764 PeptideAtlas:P38764 EnsemblFungi:YHR027C GeneID:856422
KEGG:sce:YHR027C NextBio:981994 Genevestigator:P38764
GermOnline:YHR027C Uniprot:P38764
Length = 993
Score = 750 (269.1 bits), Expect = 1.4e-160, Sum P(3) = 1.4e-160
Identities = 165/448 (36%), Positives = 252/448 (56%)
Query: 153 ATNKYE--KPQLLELIEDIIQFDMKHNAEIQACDLLMEIDHLELLDKHMDVTNYPRVCLY 210
AT+ +E K L L DI+ + +KHN E A DLL+EI+ ++ L + +D + RVC Y
Sbjct: 189 ATSGFEFSKEDTLRLCLDIVPYFLKHNGEEDAVDLLLEIESIDKLPQFVDENTFQRVCQY 248
Query: 211 LSNCALYVEEPERSVITNGVLNNYLKFKEYPRALTLALQLNDEPSVLKIFQLCEDPVVRK 270
+ C + PE + YL E A+ LA++L +E + +F DPV+ K
Sbjct: 249 MVACVPLLPPPEDVAFLKTAYSIYLSQNELTDAIALAVRLGEEDMIRSVFDATSDPVMHK 308
Query: 271 QLAYMAGRQQITIELPDEMPDKNDLQIIMTNSHINDHFHSLARELDIMEPKTPEEVYKTW 330
QLAY+ Q+ + E +Q I+ N +++HF LA+EL++ PK PE++YK+
Sbjct: 309 QLAYILAAQKTSFEY-------EGVQDIIGNGKLSEHFLYLAKELNLTGPKVPEDIYKSH 361
Query: 331 LENIVLRPTYNLDVPVDSARHNLASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGML 390
L+N + ++ +DSA+ NLAS+FVN F+N G+ DKL+ D + W+YK K GM
Sbjct: 362 LDNS--KSVFS-SAGLDSAQQNLASSFVNGFLNLGYCNDKLIV--DNDNWVYKTKGDGMT 416
Query: 391 SAAASLGLIYLWDVDGGLTPIDKYLYTSEDYIKAGALLALGIVNCGVRN-ECDPALALLS 449
SA AS+G IY W++DG L +DKYLY E +KAGALL +GI GV + E +PAL LL
Sbjct: 417 SAVASIGSIYQWNLDG-LQQLDKYLYVDEPEVKAGALLGIGISASGVHDGEVEPALLLLQ 475
Query: 450 DYVLNDSITLRIXXXXXXXXXXXXTKRQEVVTLLLPVLTDRKSTPEVVAFAAVAASLIYV 509
DYV N + +K EV+ LLLP+ E A A++A + ++V
Sbjct: 476 DYVTNPDTKISSAAILGLGIAFAGSKNDEVLGLLLPIAASTDLPIETAAMASLALAHVFV 535
Query: 510 GTGYHEVASAILQTLIELPVSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDP 569
GT ++ ++I+ +E EL+ + RFL LAL I Y+G+ + +D L + + P
Sbjct: 536 GTCNGDITTSIMDNFLERTAIELKTD-WVRFLALALGILYMGQGEQVDDVLETISAIEHP 594
Query: 570 FRSMAKMMLKMCAYAGSGDVLVVQEFLH 597
S ++++ CAY G+GDVL++Q+ LH
Sbjct: 595 MTSAIEVLVGSCAYTGTGDVLLIQDLLH 622
Score = 585 (211.0 bits), Expect = 1.4e-160, Sum P(3) = 1.4e-160
Identities = 118/239 (49%), Positives = 162/239 (67%)
Query: 670 EEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAH 729
E+IG EMS R FG L YG +RR VPLA+ + S+S+P + V D L ++SHD D EV+
Sbjct: 750 EDIGKEMSLRHFGHLMHYGNEHIRRMVPLAMGIVSVSDPQMKVFDTLTRFSHDADLEVSM 809
Query: 730 NAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHT 789
N+IF+MGL GAGTNNARLA +LRQLA Y+ + LF+ R+AQGL H+GKGT+++ F+
Sbjct: 810 NSIFAMGLCGAGTNNARLAQLLRQLASYYSREQDALFITRLAQGLLHLGKGTMTMDVFN- 868
Query: 790 DRQILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAMYPRWLVTLDENQEPVSVS 849
D +LN V LA +L + ++ K H L Y L + P++++ L++ EP+ V+
Sbjct: 869 DAHVLNKVTLASILTTAVGLVSPSFML--KHHQLFYMLNAGIRPKFILALNDEGEPIKVN 926
Query: 850 VRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDDYVPLTPVMEGFVILRK 908
VRVGQAV+ +G+AG PK I G T +TPVLL GERAEL TD+Y+ T +EG VIL+K
Sbjct: 927 VRVGQAVETVGQAGRPKKITGWITQSTPVLLNHGERAELETDEYISYTSHIEGVVILKK 985
Score = 266 (98.7 bits), Expect = 1.4e-160, Sum P(3) = 1.4e-160
Identities = 56/153 (36%), Positives = 88/153 (57%)
Query: 8 PDKDEKVTKGKGEKNPDEMSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMRDLIRXXX 67
P+K K K ++ +++SEED +L+ DL +LVE++K D LY +L ++++ I+
Sbjct: 20 PEKQTPNKKDKKKEEEEQLSEEDAKLKTDLELLVERLKEDDSSLYEASLNALKESIKNST 79
Query: 68 XXXXXVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMS-QDNVEQECLKYCL 126
VP PLKFLR Y L +K TD K L ++S+LAM+ +N + + L+Y L
Sbjct: 80 SSMTAVPKPLKFLRPTYPDLCSIYDKWTDPNLKSSLADVLSILAMTYSENGKHDSLRYRL 139
Query: 127 MAKQKDVGDWGHEYVRQLEAEIAEEWATNKYEK 159
++ D WGHEY+R L EI E + ++ EK
Sbjct: 140 LSDVSDFEGWGHEYIRHLALEIGEVY-NDQVEK 171
Score = 62 (26.9 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 30/114 (26%), Positives = 53/114 (46%)
Query: 720 SHDLDEEVAHNAIFSMGLVGAGTNNARLATMLRQ--LAQYHVK-NTGHLFMVRIAQGLTH 776
S DL E A A ++ V GT N + T + L + ++ T + + +A G+ +
Sbjct: 515 STDLPIETAAMASLALAHVFVGTCNGDITTSIMDNFLERTAIELKTDWVRFLALALGILY 574
Query: 777 MGKGTVSLSPFHTDRQILNPVALA-GLLVVLTSFLDTKNIILGKSHYLLYCLVP 829
MG+G T I +P+ A +LV ++ T +++L + LL+ L P
Sbjct: 575 MGQGEQVDDVLETISAIEHPMTSAIEVLVGSCAYTGTGDVLLIQD--LLHRLTP 626
Score = 56 (24.8 bits), Expect = 1.4e-19, Sum P(2) = 1.4e-19
Identities = 26/95 (27%), Positives = 42/95 (44%)
Query: 672 IGSEMSTRIFG--QLGRY---GEPTVRRAVPLAIALCSMS------NPALNVIDVLNKYS 720
IGS + G QL +Y EP V+ L I + + PAL + L Y
Sbjct: 422 IGSIYQWNLDGLQQLDKYLYVDEPEVKAGALLGIGISASGVHDGEVEPALLL---LQDYV 478
Query: 721 HDLDEEVAHNAIFSMGLVGAGTNNARLATMLRQLA 755
+ D +++ AI +G+ AG+ N + +L +A
Sbjct: 479 TNPDTKISSAAILGLGIAFAGSKNDEVLGLLLPIA 513
Score = 49 (22.3 bits), Expect = 7.3e-19, Sum P(2) = 7.3e-19
Identities = 12/48 (25%), Positives = 24/48 (50%)
Query: 710 LNVIDVLNKYSHDLDEEVAHNAIFSMGLVGAGTNNARLATMLRQLAQY 757
L+ + L+KY + + EV A+ +G+ +G ++ + L L Y
Sbjct: 430 LDGLQQLDKYLYVDEPEVKAGALLGIGISASGVHDGEVEPALLLLQDY 477
Score = 40 (19.1 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
Identities = 14/64 (21%), Positives = 31/64 (48%)
Query: 519 AILQTLIELPVSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMML 578
A L+T +EL V L++ S + A+ K++I + +++ +P P + +
Sbjct: 43 AKLKTDLELLVERLKEDDSSLYEASLNAL-----KESIKNSTSSMTAVPKPLKFLRPTYP 97
Query: 579 KMCA 582
+C+
Sbjct: 98 DLCS 101
>GENEDB_PFALCIPARUM|PFB0260w [details] [associations]
symbol:PFB0260w "proteasome 26S regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0006511 GO:GO:0042176 EMBL:AE001362
GO:GO:0005838 HOGENOM:HOG000176022 KO:K03028 PANTHER:PTHR10943:SF1
RefSeq:XP_001349569.2 IntAct:O96153 MINT:MINT-1742855 PRIDE:O96153
EnsemblProtists:PFB0260w:mRNA GeneID:812651 KEGG:pfa:PFB0260w
EuPathDB:PlasmoDB:PF3D7_0205900 ProtClustDB:CLSZ2514754
Uniprot:O96153
Length = 966
Score = 681 (244.8 bits), Expect = 1.6e-149, Sum P(3) = 1.6e-149
Identities = 148/448 (33%), Positives = 256/448 (57%)
Query: 162 LLELIEDIIQFDMKHNAEIQACDLLMEIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEP 221
+ +++ ++ + HN E +A DLL+E+D + + ++D + R LYL N Y
Sbjct: 189 IYDIVNIVVPYCFAHNTEYEAIDLLIEVDKINDIYLYVDEKSCDRSILYLLNLTHYSSST 248
Query: 222 ERSV-ITNGVLNNYLKFKEYPRALTLALQLNDEPSVLKIFQLCEDPVVRKQLAYMAGRQQ 280
+ + + +LN K ++ L + L+LN + + C D ++ KQ+A + R
Sbjct: 249 DEYYKLMDVILNILKKHNKHVECLKILLRLNKIDKIKDLIFECNDILICKQIALICSRHC 308
Query: 281 ITIELPDEMPDK------NDLQIIMTNSHINDHFHSLARELDIMEPKTPEEVYKTWLENI 334
+ I+ +E K N++ + + H++ F LA++LD+ EPK PE+VYK+ LE
Sbjct: 309 VHIQFTEEEIKKYTHLNLNEISTLTSGEHLSPIFLKLAKDLDVEEPKLPEDVYKSHLEE- 367
Query: 335 VLRPTYNLDVPVDSARHNLASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAA 394
N V DSA+ NL+STFVNAFVNA F +DKL++V + + W++KNK +G++SA A
Sbjct: 368 ----KRNTTV-WDSAKQNLSSTFVNAFVNAAFCKDKLMTV-NSSLWIFKNKDYGLMSATA 421
Query: 395 SLGLIYLWDVDGGLTPIDKYLYTSEDYIKAGALLALGIVNCGVRNECDPALALLSDYVLN 454
S+GL+ +W++D GL+ IDK+ Y+S+ Y+KAGAL+A G+ ++NECDPA ALLS+++
Sbjct: 422 SMGLLLMWNLDEGLSQIDKFQYSSDQYVKAGALMAFGLACTNIKNECDPAYALLSEHIDA 481
Query: 455 DSITLRIXXXXXXXXXXXXTKRQEVVTLLLPVLTDRKSTPEVVAFAAVAASLIYVGTGYH 514
++ ++ T R+ ++ +L+P L D E +AA++ L++VG+
Sbjct: 482 ENALEKMGAILGFGYAYAGTNRENLLDILIPPLVDNGCIIECSVYAALSLGLVFVGSQNR 541
Query: 515 EVASAILQTLIELP-VSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSM 573
E+A I+ T++E ++ D ++ +AL + +L ++ + TL+ALE++ P
Sbjct: 542 EIAEYIIDTVLEKEKINNSLDTPIAKLYAVALGLLFLCSREKCEATLSALEIIKHPISKY 601
Query: 574 AKMMLKMCAYAGSGDVLVVQEFLHVCSE 601
++ A+AGS DVL VQ+ L V E
Sbjct: 602 MIATVEGMAFAGSNDVLKVQKMLQVLVE 629
Score = 650 (233.9 bits), Expect = 1.6e-149, Sum P(3) = 1.6e-149
Identities = 123/239 (51%), Positives = 178/239 (74%)
Query: 670 EEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAH 729
++I S+M+TRI +Y ++AVPLA+AL S P N++D+L+K +HD D +VA
Sbjct: 718 DDISSDMTTRIIDHFLQYSNVNQKKAVPLALALLFTSFPKPNIVDILSKLTHDQDPDVAL 777
Query: 730 NAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHT 789
+AI S+G VGAGTNN+R+A +LRQL+ ++ K+T +F+VR+AQGL +MGKG ++++P H+
Sbjct: 778 HAIISLGFVGAGTNNSRIAILLRQLSAFYCKDTNAIFVVRLAQGLLYMGKGLLTINPLHS 837
Query: 790 DRQILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAMYPRWLVTLDENQEPVSVS 849
+R I+N V+L LL+ + + L K+ ILGK HYLLY LVP +YPR LVT++E E + VS
Sbjct: 838 NRSIINYVSLGSLLITIHACLQLKSTILGKYHYLLYHLVPCIYPRMLVTVNEKLESLPVS 897
Query: 850 VRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDDYVPLTPVMEGFVILRK 908
VRVGQAVD++G+AG PKTI G TH TPVLL+ +RAE+AT++Y+ + +EG VIL+K
Sbjct: 898 VRVGQAVDIVGQAGKPKTITGFQTHVTPVLLSHTDRAEMATEEYISVNDTLEGIVILKK 956
Score = 168 (64.2 bits), Expect = 1.6e-149, Sum P(3) = 1.6e-149
Identities = 40/157 (25%), Positives = 83/157 (52%)
Query: 4 KIAVPDKDEKVTKGKGEK-NPDEMSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMRDL 62
++ V D D+K K K +E++EE+K+ +E+L +L+ +++ D ++ ++ +
Sbjct: 12 QVPVKDVDDKRRKLNNSKIKKEELNEEEKKKKEELELLITRLRDEDVNVVNLSISLLNKE 71
Query: 63 IRXXXXXXXXVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQDNVEQECL 122
I + LK L+ HY L E +M ++ KK L ++IS L+ + + E +
Sbjct: 72 IIDTSGILTSSLLALKVLKTHYNTLIEIFNEMIFEECKKKLSNMISALSTTIGD-ENNIV 130
Query: 123 KYCLMAKQKDVGDWGHEYVRQLEAEIAEEWATNKYEK 159
K+ + + D+ ++GHEY++ L ++ E+ K E+
Sbjct: 131 KFVITGNKHDLINYGHEYIKNLITKLLVEYKILKEEE 167
Score = 52 (23.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 476 RQEVVTLLLPVLTDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSELQDG 535
+ +V +L + D+ P+V A + SL +VG G + AIL L +L +D
Sbjct: 757 KPNIVDILSKLTHDQD--PDVALHAII--SLGFVGAGTNNSRIAIL--LRQLSAFYCKDT 810
Query: 536 HYSRFLPLALAITYLGK 552
+ + LA + Y+GK
Sbjct: 811 NAIFVVRLAQGLLYMGK 827
Score = 38 (18.4 bits), Expect = 5.5e-81, Sum P(3) = 5.5e-81
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 588 DVLVVQEFLHVCSEH 602
D+L+ ++ +CS H
Sbjct: 293 DILICKQIALICSRH 307
Score = 38 (18.4 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 411 IDKYLYTSEDYIKAGALLALGIVNCGVRN 439
+ K + + + A+++LG V G N
Sbjct: 764 LSKLTHDQDPDVALHAIISLGFVGAGTNN 792
Score = 38 (18.4 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 731 AIFSMGLVGAGTNNARLA 748
A S+GLV G+ N +A
Sbjct: 527 AALSLGLVFVGSQNREIA 544
Score = 38 (18.4 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 720 SHDLDEEVA---HNAIFSMGLVGAGTNNARLATML 751
S +D E A AI G AGTN L +L
Sbjct: 476 SEHIDAENALEKMGAILGFGYAYAGTNRENLLDIL 510
>UNIPROTKB|O96153 [details] [associations]
symbol:PFB0260w "Proteasome 26S regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR016024
InterPro:IPR016643 PIRSF:PIRSF015965 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0006511 GO:GO:0042176 EMBL:AE001362
GO:GO:0005838 HOGENOM:HOG000176022 KO:K03028 PANTHER:PTHR10943:SF1
RefSeq:XP_001349569.2 IntAct:O96153 MINT:MINT-1742855 PRIDE:O96153
EnsemblProtists:PFB0260w:mRNA GeneID:812651 KEGG:pfa:PFB0260w
EuPathDB:PlasmoDB:PF3D7_0205900 ProtClustDB:CLSZ2514754
Uniprot:O96153
Length = 966
Score = 681 (244.8 bits), Expect = 1.6e-149, Sum P(3) = 1.6e-149
Identities = 148/448 (33%), Positives = 256/448 (57%)
Query: 162 LLELIEDIIQFDMKHNAEIQACDLLMEIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEP 221
+ +++ ++ + HN E +A DLL+E+D + + ++D + R LYL N Y
Sbjct: 189 IYDIVNIVVPYCFAHNTEYEAIDLLIEVDKINDIYLYVDEKSCDRSILYLLNLTHYSSST 248
Query: 222 ERSV-ITNGVLNNYLKFKEYPRALTLALQLNDEPSVLKIFQLCEDPVVRKQLAYMAGRQQ 280
+ + + +LN K ++ L + L+LN + + C D ++ KQ+A + R
Sbjct: 249 DEYYKLMDVILNILKKHNKHVECLKILLRLNKIDKIKDLIFECNDILICKQIALICSRHC 308
Query: 281 ITIELPDEMPDK------NDLQIIMTNSHINDHFHSLARELDIMEPKTPEEVYKTWLENI 334
+ I+ +E K N++ + + H++ F LA++LD+ EPK PE+VYK+ LE
Sbjct: 309 VHIQFTEEEIKKYTHLNLNEISTLTSGEHLSPIFLKLAKDLDVEEPKLPEDVYKSHLEE- 367
Query: 335 VLRPTYNLDVPVDSARHNLASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAA 394
N V DSA+ NL+STFVNAFVNA F +DKL++V + + W++KNK +G++SA A
Sbjct: 368 ----KRNTTV-WDSAKQNLSSTFVNAFVNAAFCKDKLMTV-NSSLWIFKNKDYGLMSATA 421
Query: 395 SLGLIYLWDVDGGLTPIDKYLYTSEDYIKAGALLALGIVNCGVRNECDPALALLSDYVLN 454
S+GL+ +W++D GL+ IDK+ Y+S+ Y+KAGAL+A G+ ++NECDPA ALLS+++
Sbjct: 422 SMGLLLMWNLDEGLSQIDKFQYSSDQYVKAGALMAFGLACTNIKNECDPAYALLSEHIDA 481
Query: 455 DSITLRIXXXXXXXXXXXXTKRQEVVTLLLPVLTDRKSTPEVVAFAAVAASLIYVGTGYH 514
++ ++ T R+ ++ +L+P L D E +AA++ L++VG+
Sbjct: 482 ENALEKMGAILGFGYAYAGTNRENLLDILIPPLVDNGCIIECSVYAALSLGLVFVGSQNR 541
Query: 515 EVASAILQTLIELP-VSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSM 573
E+A I+ T++E ++ D ++ +AL + +L ++ + TL+ALE++ P
Sbjct: 542 EIAEYIIDTVLEKEKINNSLDTPIAKLYAVALGLLFLCSREKCEATLSALEIIKHPISKY 601
Query: 574 AKMMLKMCAYAGSGDVLVVQEFLHVCSE 601
++ A+AGS DVL VQ+ L V E
Sbjct: 602 MIATVEGMAFAGSNDVLKVQKMLQVLVE 629
Score = 650 (233.9 bits), Expect = 1.6e-149, Sum P(3) = 1.6e-149
Identities = 123/239 (51%), Positives = 178/239 (74%)
Query: 670 EEIGSEMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAH 729
++I S+M+TRI +Y ++AVPLA+AL S P N++D+L+K +HD D +VA
Sbjct: 718 DDISSDMTTRIIDHFLQYSNVNQKKAVPLALALLFTSFPKPNIVDILSKLTHDQDPDVAL 777
Query: 730 NAIFSMGLVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHT 789
+AI S+G VGAGTNN+R+A +LRQL+ ++ K+T +F+VR+AQGL +MGKG ++++P H+
Sbjct: 778 HAIISLGFVGAGTNNSRIAILLRQLSAFYCKDTNAIFVVRLAQGLLYMGKGLLTINPLHS 837
Query: 790 DRQILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAMYPRWLVTLDENQEPVSVS 849
+R I+N V+L LL+ + + L K+ ILGK HYLLY LVP +YPR LVT++E E + VS
Sbjct: 838 NRSIINYVSLGSLLITIHACLQLKSTILGKYHYLLYHLVPCIYPRMLVTVNEKLESLPVS 897
Query: 850 VRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDDYVPLTPVMEGFVILRK 908
VRVGQAVD++G+AG PKTI G TH TPVLL+ +RAE+AT++Y+ + +EG VIL+K
Sbjct: 898 VRVGQAVDIVGQAGKPKTITGFQTHVTPVLLSHTDRAEMATEEYISVNDTLEGIVILKK 956
Score = 168 (64.2 bits), Expect = 1.6e-149, Sum P(3) = 1.6e-149
Identities = 40/157 (25%), Positives = 83/157 (52%)
Query: 4 KIAVPDKDEKVTKGKGEK-NPDEMSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMRDL 62
++ V D D+K K K +E++EE+K+ +E+L +L+ +++ D ++ ++ +
Sbjct: 12 QVPVKDVDDKRRKLNNSKIKKEELNEEEKKKKEELELLITRLRDEDVNVVNLSISLLNKE 71
Query: 63 IRXXXXXXXXVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQDNVEQECL 122
I + LK L+ HY L E +M ++ KK L ++IS L+ + + E +
Sbjct: 72 IIDTSGILTSSLLALKVLKTHYNTLIEIFNEMIFEECKKKLSNMISALSTTIGD-ENNIV 130
Query: 123 KYCLMAKQKDVGDWGHEYVRQLEAEIAEEWATNKYEK 159
K+ + + D+ ++GHEY++ L ++ E+ K E+
Sbjct: 131 KFVITGNKHDLINYGHEYIKNLITKLLVEYKILKEEE 167
Score = 52 (23.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 22/77 (28%), Positives = 37/77 (48%)
Query: 476 RQEVVTLLLPVLTDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSELQDG 535
+ +V +L + D+ P+V A + SL +VG G + AIL L +L +D
Sbjct: 757 KPNIVDILSKLTHDQD--PDVALHAII--SLGFVGAGTNNSRIAIL--LRQLSAFYCKDT 810
Query: 536 HYSRFLPLALAITYLGK 552
+ + LA + Y+GK
Sbjct: 811 NAIFVVRLAQGLLYMGK 827
Score = 38 (18.4 bits), Expect = 5.5e-81, Sum P(3) = 5.5e-81
Identities = 5/15 (33%), Positives = 10/15 (66%)
Query: 588 DVLVVQEFLHVCSEH 602
D+L+ ++ +CS H
Sbjct: 293 DILICKQIALICSRH 307
Score = 38 (18.4 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 411 IDKYLYTSEDYIKAGALLALGIVNCGVRN 439
+ K + + + A+++LG V G N
Sbjct: 764 LSKLTHDQDPDVALHAIISLGFVGAGTNN 792
Score = 38 (18.4 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 731 AIFSMGLVGAGTNNARLA 748
A S+GLV G+ N +A
Sbjct: 527 AALSLGLVFVGSQNREIA 544
Score = 38 (18.4 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 13/35 (37%), Positives = 15/35 (42%)
Query: 720 SHDLDEEVA---HNAIFSMGLVGAGTNNARLATML 751
S +D E A AI G AGTN L +L
Sbjct: 476 SEHIDAENALEKMGAILGFGYAYAGTNRENLLDIL 510
>UNIPROTKB|H9KZ05 [details] [associations]
symbol:Gga.48069 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0030234 "enzyme regulator activity" evidence=IEA] [GO:0042176
"regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016643 GO:GO:0030234 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 GeneTree:ENSGT00550000074983 PANTHER:PTHR10943:SF1
EMBL:AADN02048751 Ensembl:ENSGALT00000002178 Uniprot:H9KZ05
Length = 165
Score = 600 (216.3 bits), Expect = 1.9e-58, P = 1.9e-58
Identities = 115/164 (70%), Positives = 138/164 (84%)
Query: 750 MLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHTDRQILNPVALAGLLVVLTSF 809
MLRQLAQYH K+ +LFMVR+AQGLTH+GKGT++L P+H+DRQ+++ VA+AGLL VL SF
Sbjct: 1 MLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCPYHSDRQLMSQVAVAGLLTVLVSF 60
Query: 810 LDTKNIILGKSHYLLYCLVPAMYPRWLVTLDENQEPVSVSVRVGQAVDVIGKAGTPKTIA 869
LD +NIILGKSHY+LY LV AM PR LVT DE P+ VSVRVGQAVDV+G+AG PKTI
Sbjct: 61 LDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPLPVSVRVGQAVDVVGQAGKPKTIT 120
Query: 870 GVHTHTTPVLLAVGERAELATDDYVPLTPVMEGFVILRKKDKDD 913
G THTTPVLLA GERAELAT+++VP+TP++EGFVILRK D
Sbjct: 121 GFQTHTTPVLLAHGERAELATEEHVPVTPILEGFVILRKNPNYD 164
>UNIPROTKB|H7C1H2 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9606 "Homo sapiens" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016643 GO:GO:0030234 SUPFAM:SSF48371
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 EMBL:AC078797
PANTHER:PTHR10943:SF1 HGNC:HGNC:9559 ChiTaRS:PSMD2
ProteinModelPortal:H7C1H2 Ensembl:ENST00000432855 Uniprot:H7C1H2
Length = 203
Score = 360 (131.8 bits), Expect = 1.0e-53, Sum P(2) = 1.0e-53
Identities = 66/91 (72%), Positives = 82/91 (90%)
Query: 686 RYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAHNAIFSMGLVGAGTNNA 745
RYGEPT+RRAVPLA+AL S+SNP LN++D L+K+SHD D EV++N+IF+MG+VG+GTNNA
Sbjct: 113 RYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPEVSYNSIFAMGMVGSGTNNA 172
Query: 746 RLATMLRQLAQYHVKNTGHLFMVRIAQGLTH 776
RLA MLRQLAQYH K+ +LFMVR+AQGLTH
Sbjct: 173 RLAAMLRQLAQYHAKDPNNLFMVRLAQGLTH 203
Score = 232 (86.7 bits), Expect = 1.0e-53, Sum P(2) = 1.0e-53
Identities = 44/81 (54%), Positives = 63/81 (77%)
Query: 523 TLIELPVSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCA 582
T++E +EL+D Y+R+LPL L + +LGK +AI+ LAALEV+ +PFRS A ++ +CA
Sbjct: 2 TIMEKSETELKDT-YARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCA 60
Query: 583 YAGSGDVLVVQEFLHVCSEHY 603
YAGSG+VL VQ+ LH+CSEH+
Sbjct: 61 YAGSGNVLKVQQLLHICSEHF 81
Score = 41 (19.5 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 9 DKDEKVTKGKGEKN-PDEMSEEDKRLQE 35
DKD+K K K +K P +M R E
Sbjct: 89 DKDKKEKKDKDKKEAPADMGAHQLRYGE 116
>UNIPROTKB|C9JPC0 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9606 "Homo sapiens" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016643 GO:GO:0030234 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 EMBL:AC078797 PANTHER:PTHR10943:SF1 HGNC:HGNC:9559
ChiTaRS:PSMD2 IPI:IPI00795529 ProteinModelPortal:C9JPC0
STRING:C9JPC0 PRIDE:C9JPC0 Ensembl:ENST00000417952
HOGENOM:HOG000213397 ArrayExpress:C9JPC0 Bgee:C9JPC0 Uniprot:C9JPC0
Length = 217
Score = 311 (114.5 bits), Expect = 2.8e-37, Sum P(2) = 2.8e-37
Identities = 64/130 (49%), Positives = 83/130 (63%)
Query: 13 KVTKGKGEKNPD-EMSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMRDLIRXXXXXXX 71
K + G+K+ + E+SEEDK+LQ++L MLVE++ D LY PALE +R IR
Sbjct: 31 KERRDAGDKDKEQELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMT 90
Query: 72 XVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQDNVEQECLKYCLMAKQK 131
VP PLKFLR HYG LKE E M + K+ IISVLAM+ E+ECLKY L+ Q+
Sbjct: 91 SVPKPLKFLRPHYGKLKEIYENMAPGENKRFAADIISVLAMTMSG-ERECLKYRLVGSQE 149
Query: 132 DVGDWGHEYV 141
++ WGHEYV
Sbjct: 150 ELASWGHEYV 159
Score = 126 (49.4 bits), Expect = 2.8e-37, Sum P(2) = 2.8e-37
Identities = 29/61 (47%), Positives = 35/61 (57%)
Query: 210 YLSNCALYVEEPERSVITNGVLNNYLKFKEYPRALTLALQLNDEPSVLKIFQLCEDPVVR 269
Y+S C YV EPE S + L + KF +P AL LAL LND V IF C+D VV+
Sbjct: 158 YVS-CVNYVPEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQ 216
Query: 270 K 270
K
Sbjct: 217 K 217
>UNIPROTKB|F1P4Q5 [details] [associations]
symbol:PSMD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000502 "proteasome complex" evidence=IEA] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR016643
GO:GO:0030234 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074983 PANTHER:PTHR10943:SF1
EMBL:AADN02020694 IPI:IPI00590802 Ensembl:ENSGALT00000039839
ArrayExpress:F1P4Q5 Uniprot:F1P4Q5
Length = 200
Score = 345 (126.5 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 68/134 (50%), Positives = 86/134 (64%)
Query: 19 GEKNPDEMSEEDKRLQEDLNMLVEKIKGSDKHLYLPALESMRDLIRXXXXXXXXVPMPLK 78
G + E+SEEDK+LQ++L MLVE++ D LY PALE +R IR VP PLK
Sbjct: 38 GPEKEQELSEEDKQLQDELEMLVERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLK 97
Query: 79 FLRNHYGALKEACEKMTDQKPKKLLCSIISVLAMSQDNVEQECLKYCLMAKQKDVGDWGH 138
FLR HYG LKE E M + K+ IISVLAM+ E+ECLKY L+ Q+++ WGH
Sbjct: 98 FLRPHYGKLKEIYENMAPGENKRFAADIISVLAMTMSG-ERECLKYRLVGSQEELASWGH 156
Query: 139 EYVRQLEAEIAEEW 152
EYVR L E+A+EW
Sbjct: 157 EYVRHLAGEVAKEW 170
>UNIPROTKB|H7C2Q3 [details] [associations]
symbol:PSMD2 "26S proteasome non-ATPase regulatory subunit
2" species:9606 "Homo sapiens" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016643 GO:GO:0030234 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 EMBL:AC078797 PANTHER:PTHR10943:SF1 HGNC:HGNC:9559
ChiTaRS:PSMD2 ProteinModelPortal:H7C2Q3 Ensembl:ENST00000445558
Uniprot:H7C2Q3
Length = 143
Score = 243 (90.6 bits), Expect = 2.0e-19, P = 2.0e-19
Identities = 49/97 (50%), Positives = 60/97 (61%)
Query: 48 DKHLYLPALESMRDLIRXXXXXXXXVPMPLKFLRNHYGALKEACEKMTDQKPKKLLCSII 107
D LY PALE +R IR VP PLKFLR HYG LKE E M + K+ II
Sbjct: 5 DTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKRFAADII 64
Query: 108 SVLAMSQDNVEQECLKYCLMAKQKDVGDWGHEYVRQL 144
SVLAM+ E+ECLKY L+ Q+++ WGHEYVR++
Sbjct: 65 SVLAMTMSG-ERECLKYRLVGSQEELASWGHEYVREV 100
>CGD|CAL0003585 [details] [associations]
symbol:RPN2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=IEA] [GO:0030674 "protein binding, bridging" evidence=IEA]
[GO:0043248 "proteasome assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
CGD:CAL0003585 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 EMBL:AACQ01000070 EMBL:AACQ01000071 eggNOG:COG5116
KO:K03032 Pfam:PF01851 RefSeq:XP_716329.1 RefSeq:XP_716391.1
ProteinModelPortal:Q5A3L0 STRING:Q5A3L0 GeneID:3641945
GeneID:3642027 KEGG:cal:CaO19.12725 KEGG:cal:CaO19.5260
Uniprot:Q5A3L0
Length = 952
Score = 169 (64.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 107/471 (22%), Positives = 194/471 (41%)
Query: 153 ATNKYEKPQLLELIEDIIQFDMKHNAEIQACDLLMEIDHLELLDKHMD--VTNYPRVCLY 210
+T K + P+L + E ++ +K N + + +E L+L++ + + N L
Sbjct: 120 STTKID-PRLTAIFEKMLNKCLKANEVKLSLGVALESYRLDLVESILQDQIKNNEEQALN 178
Query: 211 LSNCALYVEEPE------RSVITNGVLNNYLKFKEYPRALTLA---LQLNDEPSVLKIFQ 261
L N L R + N +++ L K++ T+ +QLND +K+FQ
Sbjct: 179 LINYVLVCSNNTVSNTNFRVQVLNSLISLLLSLKKHQDFFTIIKIIVQLNDSELAVKLFQ 238
Query: 262 LCEDPVVRKQLAYMAGRQQITI---ELPDEMPDKNDLQIIMTNSHINDHFHSLARELDIM 318
+ +AY A + EL D + +K ++N+ +++ +L + L+I+
Sbjct: 239 ELINQN-EDLIAYQAAFDLVNAASQELLDLVMEK------LSNAKESEN-GTLKKILNIL 290
Query: 319 EPKTPEEVYKTWL-EN-----IVLRPTYNLDVPVDSARHNLASTFVNAFVNAGFSRDKLV 372
++ T+L +N +L T NL S H+ A TF NAF++AG + D
Sbjct: 291 SGVPTCDLDNTFLFKNNNADITILNKTKNLLDGRSSIFHS-AVTFANAFMHAGTTDDSFF 349
Query: 373 SVEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYLYTSEDYI--KAGALLAL 430
+W+ + SA A+LG+I+ ++ G T + YL S K G+L AL
Sbjct: 350 --RKNLEWLGRATNWSKFSATAALGVIHKGNLSQGRTILKPYLPGSSGSANNKGGSLFAL 407
Query: 431 GIVNCGVRNECDPALALLSDYVLN----DSITLRIXXXXXXXXXXXXTKRQEVVTLLLPV 486
G++ G E L D N + I +++ + E + L V
Sbjct: 408 GLIFAGHGREVIGTLKSFIDDNGNAAGSNDIDIQLHGAALGAGVAGMGSKSESLYESLKV 467
Query: 487 LTDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSELQDGHYSRFLPLALA 546
+ S A AA+ L+ +G+G E +L +E Q + R L + +A
Sbjct: 468 VLYSDSAISSQA-AALGMGLVMLGSGNEEAIKDMLTYALET-----QHENIIRGLAIGIA 521
Query: 547 ITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLVVQEFLH 597
+ G+++ D + L AYAG+G+ +++ LH
Sbjct: 522 LLSYGREEKADEIIDQLMNQESSILRYGGAFTIALAYAGTGNNNAIKKLLH 572
Score = 61 (26.5 bits), Expect = 1.0e-09, Sum P(2) = 1.0e-09
Identities = 31/134 (23%), Positives = 56/134 (41%)
Query: 684 LGRYGEPTVRRAVPLAIAL-CS-MSNPALNVIDVLNKYSHDLDEEVAHNAIFSMGLVGAG 741
L + P VR LA+ + C+ + PA I+VL + D + V A+ + ++
Sbjct: 608 LSQSHNPHVRYGTALALGISCAGRAYPA--AIEVLEPLTKDAVDFVRQGALMASSMILIQ 665
Query: 742 TNNARLATMLRQLAQYH--VKNTGH----LFMVRIAQGLTHMGKGTVSLSPFHTDRQILN 795
N + QY +KN F +AQG+ G +++ ++ LN
Sbjct: 666 QNEFIYPKVKEFTKQYADTIKNKHEDALAKFGATLAQGIIDAGGRNSTINLENSQTNTLN 725
Query: 796 PVALAGLLVVLTSF 809
A+ GL + + S+
Sbjct: 726 TKAIVGLTLFVQSW 739
Score = 55 (24.4 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 39/197 (19%), Positives = 72/197 (36%)
Query: 675 EMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYS-HDLDEEVAHNAIF 733
E + I QL +R IAL N I L ++ D ++V ++
Sbjct: 529 EKADEIIDQLMNQESSILRYGGAFTIALAYAGTGNNNAIKKLLHFAVSDPSDDVRRASVL 588
Query: 734 SMG--LVGAGTNNARLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHTDR 791
S+G L+ T ++ +L Q HV+ + +A G++ G+ +
Sbjct: 589 SLGFLLIRDYTAAPQIVKLLSQSHNPHVR-----YGTALALGISCAGRA------YPAAI 637
Query: 792 QILNPVALAGLLVVLTSFLDTKNIILGKSHYLLYCLVPAMYPRWLVTLDENQEPVSVSVR 851
++L P+ + V L ++IL + + +Y V ++ T+ E
Sbjct: 638 EVLEPLTKDAVDFVRQGALMASSMILIQQNEFIYPKVKEFTKQYADTIKNKHEDALAKFG 697
Query: 852 VGQAVDVIGKAGTPKTI 868
A +I G TI
Sbjct: 698 ATLAQGIIDAGGRNSTI 714
>DICTYBASE|DDB_G0287953 [details] [associations]
symbol:psmD1 "26S proteasome regulatory subunit S1"
species:44689 "Dictyostelium discoideum" [GO:0050790 "regulation of
catalytic activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 dictyBase:DDB_G0287953
INTERPRO:IPR002015 GO:GO:0005634 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GenomeReviews:CM000154_GR GO:GO:0004175 GO:GO:0006511 GO:GO:0042176
EMBL:AAFI02000105 GO:GO:0005838 eggNOG:COG5116 KO:K03032
OMA:CVENAEL Pfam:PF01851 RefSeq:XP_636972.1
ProteinModelPortal:Q54JM5 IntAct:Q54JM5 STRING:Q54JM5 PRIDE:Q54JM5
EnsemblProtists:DDB0232977 GeneID:8626381 KEGG:ddi:DDB_G0287953
ProtClustDB:CLSZ2728851 Uniprot:Q54JM5
Length = 975
Score = 146 (56.5 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 62/247 (25%), Positives = 105/247 (42%)
Query: 357 FVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYL- 415
F NA ++AG +RD + +W+YK+ SA +SLG+I + + + YL
Sbjct: 361 FANALMHAGTTRDTFL--RSNIEWLYKSTHWTKFSAISSLGVINKGHIKESKSLLKTYLP 418
Query: 416 ---YTSEDYIKAGALLALGIVNCGVRNECDPALALLSDYVLNDSITLRIXXXXXXXXXXX 472
Y ++G+L ALG+++ E L + +N++I L
Sbjct: 419 GASVNQTPYSESGSLYALGLIHASHGEEIIDYL--VEKLHINNAI-LHHGASLGLGLAAM 475
Query: 473 XTKRQEVVTLLLPVL-TDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSE 531
T R ++ L VL D + E A +A L+ +G+G A ++ ++ E
Sbjct: 476 ATGRDDLYEDLKSVLYNDDAVSGEA---AGLAMGLVMLGSG----AKKAIEEMLAY-AHE 527
Query: 532 LQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLV 591
Q R L + LA GK+++ DT + + DP M AY G+G
Sbjct: 528 TQHEKTIRSLSMGLAFLMYGKEESADTLIEQMIGDKDPLIRYGGMYAIAFAYCGTGHNDA 587
Query: 592 VQEFLHV 598
+++ LHV
Sbjct: 588 LRKLLHV 594
Score = 59 (25.8 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 27/119 (22%), Positives = 54/119 (45%)
Query: 139 EYVRQLEAEIAEEW-----ATNKYE--KPQLLELIEDIIQFDMKHNAEIQACDLLMEIDH 191
EY+ L + +E+ +TNK P L ++ + K + QA + +E
Sbjct: 98 EYIETLLYKFIDEYIKLRTSTNKDTVINPHLESIVMGMFDRCFKEGSYKQALGIAIEARR 157
Query: 192 LELLDKHM----DVTNYPRVCLYLSNCALYVEEPERSVITNGVLNNYLKFKEYPRALTL 246
L++++K + +V + CL++ N ++ SV+ G+L N +E P L++
Sbjct: 158 LDIIEKAISQSGNVNSMLSYCLHICNVSVNNRHFRHSVL--GILVNLHLAQEKPDYLSV 214
Score = 51 (23.0 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
Identities = 21/95 (22%), Positives = 33/95 (34%)
Query: 688 GEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAHNAIFSMGLVGAGTNNARL 747
G +VRRA I P + + + V + A F++G+ AGT
Sbjct: 599 GTDSVRRAAVTCIGFVLSRQPE-KCPKAIALLAESYNPHVRYGAAFALGIACAGTGQRDA 657
Query: 748 ATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTV 782
+L+ L V + +A L K V
Sbjct: 658 LEILKSLTTDSVGYVKQAAWISMAMVLIQTSKELV 692
>POMBASE|SPBC17D11.07c [details] [associations]
symbol:rpn2 "19S proteasome regulatory subunit Rpn2
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISO] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0004175 "endopeptidase
activity" evidence=ISO] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 PomBase:SPBC17D11.07c INTERPRO:IPR002015
GO:GO:0005829 GO:GO:0005634 GO:GO:0007346 GO:GO:0030234
SUPFAM:SSF48371 GO:GO:0043161 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:CU329671 GO:GO:0050790 GenomeReviews:CU329671_GR GO:GO:0042176
GO:GO:0008540 eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032
OMA:CVENAEL Pfam:PF01851 PIR:T39718 RefSeq:NP_596381.1
ProteinModelPortal:O74762 IntAct:O74762 STRING:O74762
EnsemblFungi:SPBC17D11.07c.1 GeneID:2540191 KEGG:spo:SPBC17D11.07c
OrthoDB:EOG4KD9V5 NextBio:20801323 Uniprot:O74762
Length = 965
Score = 152 (58.6 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 65/261 (24%), Positives = 106/261 (40%)
Query: 347 DSARHNLASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDG 406
+S HN A TF NAF+N G S D D W+ K +A A+LG+I+ +
Sbjct: 344 NSVFHN-AVTFANAFMNFGTSSDSFF--RDNLSWLSKANNWSKFTATAALGVIHRGYYNQ 400
Query: 407 GLTPIDKYLY-----TSEDYIKAGALLALGIVNC----GVRNECDPALALLSDYVLNDSI 457
+ + YL +S Y + GA A+G+++ GV L D ++ +
Sbjct: 401 AMNILRPYLPEEDAPSSSTYSEGGAFYAMGLIHANHGRGVTEYLREQLKHTEDEIVQYGL 460
Query: 458 TLRIXXXXXXXXXXXXTKRQEVVTLLLPVLTDRKSTPEVVAFAAVAASLIYVGTGYHEVA 517
L I T + V T+L D A ++ LI +GT +
Sbjct: 461 LLGIGLTGMASRDE--TLYESVKTILF---NDNAVAGSA---AGISMGLIMLGTA----S 508
Query: 518 SAILQTLIELPVSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMM 577
SA + +++ E Q R L + +A+ G++ D + L DP A M
Sbjct: 509 SAAIDEMLQY-AHETQHEKIIRGLGIGIALIVYGRQQEADGIIKELNNDLDPTLRYAGMF 567
Query: 578 LKMCAYAGSGDVLVVQEFLHV 598
AY G+ + +V++ LH+
Sbjct: 568 ATALAYCGTSNSKIVRDVLHI 588
Score = 59 (25.8 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 26/123 (21%), Positives = 56/123 (45%)
Query: 690 PTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAHNAIFSMGLVGAGTN---NAR 746
P VR +A+ + ++ + +D+L++ D + V A+ + ++ N N++
Sbjct: 629 PHVRYGSAIALGIACANSGSNAALDLLSRLVEDATDFVRQGAMIAQAMILTQHNDQLNSK 688
Query: 747 LATMLRQLAQY-HVKNTGHLFMV--RIAQGLTHMGKGTVSLSPFHTDRQILNPVALAGLL 803
++ + + Q + K+ L + +AQG+ G V+++ T L A+ GL
Sbjct: 689 VSGIRKHFEQVINEKHEDALAKLGATLAQGIIDAGGRNVTIA-LQTATGSLKLSAIVGLT 747
Query: 804 VVL 806
V L
Sbjct: 748 VFL 750
Score = 44 (20.5 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 24/99 (24%), Positives = 44/99 (44%)
Query: 168 DIIQFDMKHNAEIQACDLLMEIDHLELLDKHMDVTNYPRVCLYLSNCALYVEEPERSVIT 227
DII++ + + E ++E+ +LD ++ N R+ L + L EP+ +
Sbjct: 169 DIIEYILNADKETDLKPYVLELAMTVVLD--IEFRN--RLLRLLLSSFLTETEPDYFSVG 224
Query: 228 NGVLNNYLKFKEYPRALTLALQL-NDEPSVLKIFQLCED 265
V+ +L L + L ND+ S+L +QL D
Sbjct: 225 KCVV--HLNDASVAAKLLMKLSSQNDDKSLLTAYQLAFD 261
Score = 42 (19.8 bits), Expect = 2.2e-07, Sum P(3) = 2.2e-07
Identities = 20/58 (34%), Positives = 25/58 (43%)
Query: 221 PERSVITNGVLNNYLKFKEYPRALTLALQ-----LNDEPSVLK---IFQLCEDPVVRK 270
PER + V Y EY AL AL L+D+ S K IF+ C D + K
Sbjct: 65 PERELAALVVSKVYYYLGEYDEALLFALSSGPKFLHDKNSDYKETLIFK-CIDMFIHK 121
>TAIR|locus:2046402 [details] [associations]
symbol:AT2G32730 species:3702 "Arabidopsis thaliana"
[GO:0000502 "proteasome complex" evidence=IEA;IDA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=ISS;TAS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0007010 "cytoskeleton organization" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0010498 "proteasomal
protein catabolic process" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0005829 GO:GO:0030234 EMBL:CP002685 GenomeReviews:CT485783_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 EMBL:AC003974 eggNOG:COG5116
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 EMBL:AY099861
IPI:IPI00538191 PIR:T00795 RefSeq:NP_180832.1 UniGene:At.19478
ProteinModelPortal:O48844 SMR:O48844 IntAct:O48844 STRING:O48844
PaxDb:O48844 PRIDE:O48844 ProMEX:O48844 EnsemblPlants:AT2G32730.1
GeneID:817833 KEGG:ath:AT2G32730 TAIR:At2g32730 InParanoid:O48844
OMA:LLCNFWG PhylomeDB:O48844 ProtClustDB:CLSN2681948
ArrayExpress:O48844 Genevestigator:O48844 Uniprot:O48844
Length = 1004
Score = 148 (57.2 bits), Expect = 2.5e-07, Sum P(4) = 2.5e-07
Identities = 95/416 (22%), Positives = 174/416 (41%)
Query: 210 YLS--NCALYVEEPERSVITNGVLNNYLKFKEYPRALTLALQL------NDEPS-VLKIF 260
YLS C ++++EP+ V + +L L+ + AL LALQ+ N+ + +L +
Sbjct: 217 YLSICQCLMFLDEPQ-GVAS--ILEKLLRSENKDDAL-LALQIAFDLVENEHQAFLLSVR 272
Query: 261 QLCEDPVVRKQLAYMAGRQQITI-ELPD---EMPDKNDLQIIMTNSHINDHFHS--LARE 314
P R A A I E P +M D+ Q I+ + D ++ L +
Sbjct: 273 DRLPAPKTRAVEATQAVETTIAPNENPSGDVQMADETPAQTIVHETDPVDATYAERLTKI 332
Query: 315 LDIMEPKTPEEVYKTWL-----ENIVLRPTYNLDVPVDSARHNLASTFVNAFVNAGFSRD 369
I+ +T ++ +L ++++ T V + ++ + A+ + NA ++AG + D
Sbjct: 333 KGILSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVD 392
Query: 370 KLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYLYTS------EDYIK 423
+ + W+ + SA A LG+I+ + G + + YL Y +
Sbjct: 393 TFL--RENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPYLPQGGAGGGGSPYSE 450
Query: 424 AGALLALGIVNCGVRNECDPALALLSDYVLNDSI-TLRIXXXXXXXXXXXXTKRQEVVTL 482
GAL ALG+++ N + L D + + ++ ++ T +E+
Sbjct: 451 GGALYALGLIHA---NHGEGIKQFLRDSLRSTNVEVIQHGACLGLGLSALGTADEEIYDD 507
Query: 483 LLPVL-TDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSELQDGHYSRFL 541
+ VL TD E A ++ L+ VGT E AS +L E Q R L
Sbjct: 508 VKSVLYTDSAVAGEA---AGISMGLLLVGTAT-EKASEMLAY-----AHETQHEKIIRGL 558
Query: 542 PLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLVVQEFLH 597
L +A+T G+++ DT + + DP M AY+G+ + +++ LH
Sbjct: 559 ALGIALTVYGREEGADTLIEQMTRDQDPIIRYGGMYALALAYSGTANNKAIRQLLH 614
Score = 61 (26.5 bits), Expect = 2.5e-07, Sum P(4) = 2.5e-07
Identities = 21/83 (25%), Positives = 33/83 (39%)
Query: 675 EMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAHNAIFS 734
E + RI L P VR LA+ + I +L + D+ + V A+ +
Sbjct: 641 EQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIA 700
Query: 735 MGLVGAGTNNA---RLATMLRQL 754
M +V + A R+ RQL
Sbjct: 701 MAMVMVQISEASDSRVGVFRRQL 723
Score = 48 (22.0 bits), Expect = 2.5e-07, Sum P(4) = 2.5e-07
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 849 SVRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDD-YVPLTPVMEGFVILR 907
S++V V KA P+ + + V+ A + +L D YVP+ GFV+L+
Sbjct: 891 SMQVDSPAAVEKKAPEPEPAFEILVNPARVVPAQEKYIKLLDDSRYVPVKLAPSGFVLLK 950
Score = 38 (18.4 bits), Expect = 2.5e-07, Sum P(4) = 2.5e-07
Identities = 13/49 (26%), Positives = 26/49 (53%)
Query: 120 ECLKYCLMAKQK-DVGDWGHEYVRQLEAEIAEEWATNKYEKPQLLELIE 167
+ L Y L A DV + +YV L A+ +E+A+ + + + E+++
Sbjct: 82 DSLSYALGAGPLFDVSE-DSDYVHTLLAKAIDEYASLRSKAVESNEMVD 129
>TAIR|locus:2128823 [details] [associations]
symbol:AT4G08140 "AT4G08140" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161510
EMBL:AC006267 IPI:IPI00527843 PIR:C85080 RefSeq:NP_192554.1
UniGene:At.54196 STRING:Q9SYE4 EnsemblPlants:AT4G08140.1
GeneID:826362 KEGG:ath:AT4G08140 TAIR:At4g08140 InParanoid:Q9SYE4
Genevestigator:Q9SYE4 Uniprot:Q9SYE4
Length = 84
Score = 125 (49.1 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 30/70 (42%), Positives = 37/70 (52%)
Query: 44 IKGSDKHLYLPALESMRDLIRXXXXXXXXVPMPLKFLRNHYGALKEACEKMTDQKPKKLL 103
++ + L ALESMR IR VP PLKFLR Y LK E M D KK +
Sbjct: 2 VQDPNPDLQKAALESMRQEIRALTSSMTSVPKPLKFLRPQYVTLKAFHETMADSNLKKYI 61
Query: 104 CSIISVLAMS 113
I+SVLA++
Sbjct: 62 SDILSVLALT 71
>TAIR|locus:2010672 [details] [associations]
symbol:AT1G04810 species:3702 "Arabidopsis thaliana"
[GO:0000502 "proteasome complex" evidence=IEA;IDA] [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=ISS;TAS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0030234 "enzyme
regulator activity" evidence=IEA] [GO:0042176 "regulation of
protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0030163 "protein catabolic
process" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006094 "gluconeogenesis"
evidence=RCA] [GO:0006302 "double-strand break repair"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0007010 "cytoskeleton organization" evidence=RCA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0010332 "response to
gamma radiation" evidence=RCA] [GO:0010498 "proteasomal protein
catabolic process" evidence=RCA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=RCA]
[GO:0043248 "proteasome assembly" evidence=RCA] [GO:0051788
"response to misfolded protein" evidence=RCA] [GO:0080129
"proteasome core complex assembly" evidence=RCA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
EMBL:CP002684 GO:GO:0005829 GO:GO:0005886 GO:GO:0005634
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0030163 GO:GO:0000502 GO:GO:0042176
EMBL:AC004809 HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL
Pfam:PF01851 ProtClustDB:CLSN2681948 EMBL:BT004007 IPI:IPI00520284
PIR:C86181 RefSeq:NP_171973.1 UniGene:At.19689
ProteinModelPortal:Q9MAT0 SMR:Q9MAT0 IntAct:Q9MAT0 STRING:Q9MAT0
PRIDE:Q9MAT0 ProMEX:Q9MAT0 EnsemblPlants:AT1G04810.1 GeneID:839409
KEGG:ath:AT1G04810 TAIR:At1g04810 InParanoid:Q9MAT0
PhylomeDB:Q9MAT0 ArrayExpress:Q9MAT0 Genevestigator:Q9MAT0
Uniprot:Q9MAT0
Length = 1001
Score = 136 (52.9 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 92/416 (22%), Positives = 171/416 (41%)
Query: 210 YLS--NCALYVEEPERSVITNGVLNNYLKFKEYPRALTLALQL------NDEPSVL-KIF 260
YLS C ++++EP+ V + +L L+ + AL LA Q+ N+ + L +
Sbjct: 217 YLSICQCLMFLDEPQ-GVAS--ILEKLLRSENKDDAL-LAFQISFDLVQNEHQAFLMSVR 272
Query: 261 QLCEDPVVRKQLAYMA---GRQQITIELPD-EMPDKNDLQIIMTNSHINDHFHS--LARE 314
P R A A Q D +M D+ Q I+ + D ++ L +
Sbjct: 273 DRLPAPKTRPVEAIQAVETSTAQNENTAGDVQMADETPSQTIVHETDPVDAVYAERLTKA 332
Query: 315 LDIMEPKTPEEVYKTWL-----ENIVLRPTYNLDVPVDSARHNLASTFVNAFVNAGFSRD 369
I+ +T ++ +L ++++ T V + ++ + A+ + NA ++AG + D
Sbjct: 333 KGILSGETSIQLTLQFLYSHNKSDLLILKTIKQSVEMRNSVCHSATIYANAIMHAGTTVD 392
Query: 370 KLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYLYTS------EDYIK 423
+ + W+ + SA A LG+I+ + G + + YL Y +
Sbjct: 393 TFL--RENLDWLSRATNWAKFSATAGLGVIHRGHLQQGRSLMAPYLPQGGAGGGGSPYSE 450
Query: 424 AGALLALGIVNCGVRNECDPALALLSDYVLNDSI-TLRIXXXXXXXXXXXXTKRQEVVTL 482
GAL ALG+++ N + L D + + S+ ++ T +++
Sbjct: 451 GGALYALGLIHA---NHGEGIKQFLRDSLRSTSVEVIQHGACLGLGLAALGTADEDIYDD 507
Query: 483 LLPVL-TDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSELQDGHYSRFL 541
+ VL TD E A ++ L+ VGT + AS +L E Q R L
Sbjct: 508 IKSVLYTDSAVAGEA---AGISMGLLLVGTATDK-ASEMLAY-----AHETQHEKIIRGL 558
Query: 542 PLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLVVQEFLH 597
L +A+T G+++ DT + + DP M AY+G+ + +++ LH
Sbjct: 559 ALGIALTVYGREEGADTLIEQMTRDQDPIIRYGGMYALALAYSGTANNKAIRQLLH 614
Score = 61 (26.5 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 21/83 (25%), Positives = 33/83 (39%)
Query: 675 EMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAHNAIFS 734
E + RI L P VR LA+ + I +L + D+ + V A+ +
Sbjct: 641 EQTPRIVSLLSESYNPHVRYGAALAVGISCAGTGLSEAISLLEPLTSDVVDFVRQGALIA 700
Query: 735 MGLVGAGTNNA---RLATMLRQL 754
M +V + A R+ RQL
Sbjct: 701 MAMVMVQISEASDSRVGAFRRQL 723
Score = 50 (22.7 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 842 NQEPVSVSVRVGQAVDVIGKAGTPKTIAGVHTHTTPVLLAVGERAELATDD-YVPLTPVM 900
+ E + S++V + K P+ + + V+ + + +L D YVP+
Sbjct: 877 SDEKEAESMQVDSTATTVEKKVEPEATFEILVNPARVVPSQEKYIKLMEDSRYVPMKLAP 936
Query: 901 EGFVILR 907
GFV+LR
Sbjct: 937 SGFVLLR 943
>FB|FBgn0028692 [details] [associations]
symbol:Rpn2 "Regulatory particle non-ATPase 2" species:7227
"Drosophila melanogaster" [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0004175 "endopeptidase activity"
evidence=IDA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 EMBL:AE014297 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0006508 GO:GO:0050790
GO:GO:0006974 GO:GO:0004175 GO:GO:0042176 GO:GO:0008540
BRENDA:3.4.25.1 eggNOG:COG5116 GeneTree:ENSGT00550000074915
KO:K03032 OMA:CVENAEL Pfam:PF01851 EMBL:AF145303 EMBL:AF186594
EMBL:AF312231 EMBL:AY069503 EMBL:BT001598 EMBL:BT044102
RefSeq:NP_651677.2 UniGene:Dm.6875 ProteinModelPortal:Q9V3P6
SMR:Q9V3P6 IntAct:Q9V3P6 MINT:MINT-745147 STRING:Q9V3P6
PaxDb:Q9V3P6 PRIDE:Q9V3P6 EnsemblMetazoa:FBtr0085385 GeneID:43449
KEGG:dme:Dmel_CG11888 UCSC:CG11888-RA CTD:6185 FlyBase:FBgn0028692
InParanoid:Q9V3P6 OrthoDB:EOG4BVQ8J PhylomeDB:Q9V3P6
GenomeRNAi:43449 NextBio:834007 Bgee:Q9V3P6 GermOnline:CG11888
Uniprot:Q9V3P6
Length = 1020
Score = 148 (57.2 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 65/252 (25%), Positives = 109/252 (43%)
Query: 354 ASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDK 413
A+ NAF+++G + D+ + D W+ + L+A ASLG+I+ L +
Sbjct: 383 ATVIANAFMHSGTTSDQFL--RDNLDWLARATNWAKLTATASLGVIHRGHEKDSLALMQS 440
Query: 414 YLYT----SEDYIKAGALLALGIV--NCGVRNECDPALALLSDYVLNDSITLRIXXXXXX 467
YL S Y + GAL ALG++ N G N D L L D N+++ R
Sbjct: 441 YLPKEAGPSSGYSEGGALYALGLIHANHGA-NIIDYLLQQLKD-AQNENV--RHGGCLGL 496
Query: 468 XXXXXXTKRQEVVTLL-LPVLTDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIE 526
T RQ++ L + D T E A +A ++ +G+ + A AI + ++
Sbjct: 497 GLAGMGTHRQDLYEQLKFNLYQDDAVTGEA---AGIAMGMVMLGS---KNAQAI-EDMVS 549
Query: 527 LPVSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGS 586
E Q R L + +++T + + D + +L DP + M AY G+
Sbjct: 550 Y-AQETQHEKILRGLAVGISLTMFSRLEEADPLVTSLSSDKDPVLRRSGMYTIAMAYNGT 608
Query: 587 GDVLVVQEFLHV 598
G +++ LHV
Sbjct: 609 GSNKAIRKLLHV 620
Score = 53 (23.7 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 16/70 (22%), Positives = 29/70 (41%)
Query: 692 VRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAHNAIFSMGLVGAGTNNARLATML 751
VRRA AI +P V++ + + V + A ++G+ AGT +L
Sbjct: 629 VRRAAVTAIGFILFRSPE-QCPSVVSLLAESYNPHVRYGAAMALGIACAGTGLREAIALL 687
Query: 752 RQLAQYHVKN 761
+ ++ N
Sbjct: 688 EPMVKFDPVN 697
Score = 48 (22.0 bits), Expect = 4.4e-06, Sum P(3) = 4.4e-06
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 715 VLNKYSHDLDEEVAHNAIFSMGLVGAGTNNARLATMLR 752
+ NK H+ D + AI + G++ AG NA L+ R
Sbjct: 733 ISNK--HE-DVMAKYGAILAQGIIDAGGRNATLSLQSR 767
Score = 45 (20.9 bits), Expect = 1.4e-06, Sum P(3) = 1.4e-06
Identities = 8/23 (34%), Positives = 16/23 (69%)
Query: 21 KNPDEMSEEDKRLQEDLNMLVEK 43
+NP E S D+RL+ +N ++++
Sbjct: 118 ENPKEASVVDERLEGIVNRMIQR 140
>ASPGD|ASPL0000047917 [details] [associations]
symbol:AN1700 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:BN001307 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 EMBL:AACD01000026 InterPro:IPR004155 SMART:SM00567
eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL
Pfam:PF01851 OrthoDB:EOG4KD9V5 RefSeq:XP_659304.1
ProteinModelPortal:Q5BCN0 STRING:Q5BCN0
EnsemblFungi:CADANIAT00008343 GeneID:2874940 KEGG:ani:AN1700.2
Uniprot:Q5BCN0
Length = 1144
Score = 137 (53.3 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 110/487 (22%), Positives = 205/487 (42%)
Query: 139 EYVRQLEAEIAEEWATNKYEKPQLLELIEDIIQFDMKHNAEIQACDLLMEIDHLELLDKH 198
E +R +E+ E Q EL+E ++ M E + ++++ LELL++
Sbjct: 247 EVLRTAIMRASEDAKQQNGESRQSEELMEYVLDICMGVVQERGFRNEILKLI-LELLNE- 304
Query: 199 MDVTNYPRVCLYLSNCALYVEEPERSVITNGVLNNYLKFKEYPRALTLALQLNDEPSVLK 258
+ +Y ++ C +Y+ E + + +L ++ K R+L +A Q++ +
Sbjct: 305 IPSPDY----FAIAKCVVYLNEHSMASV---ILRQLVE-KGDARSLAVAYQISFDLYDNS 356
Query: 259 IFQLCEDPVVRKQLAYMAGRQQITIELPDEMPDKNDLQIIMTNSHINDHFHSL----ARE 314
+ + V ++++ + + E +E P ++D + +S I + S AR
Sbjct: 357 TQEFLQK--VHQEISELVPEKTEDSETKEEEPKESDALLDNQSSSIGANADSKVSAEART 414
Query: 315 -----LDIMEP-KT----PEEVYKTWLENI-VLRPTYNLDVPVDSARHNLASTFVNAFVN 363
LDI++ KT E +++ +I +L + P +S H+ A T N F+
Sbjct: 415 AFKNILDILDGIKTIQLNMEFLHRNSRVDIAILNKLRDTLEPRNSIFHS-AITISNGFMY 473
Query: 364 AGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYL--YTSED- 420
AG ++DK D +W+ K +A A+LG+I+ ++ G + YL S D
Sbjct: 474 AGTAQDKFF--RDNLEWLGKAVNWSKFTATAALGVIHRGNLSQGQRLLQPYLPKENSIDG 531
Query: 421 -------YIKAGALLALGIVNCGVRNECDPALALLSD-YVLNDSITLRIXXXXXXXXXXX 472
Y + G+L ALG++ N A+ + D + ++
Sbjct: 532 VGNSGSLYSQGGSLYALGLIYA---NHGGMAVDYIRDQFKKATEEVIQHGGALGLGVAGM 588
Query: 473 XTKRQEVVTLLLPVL-TDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPVSE 531
T + + L VL TD E V +A L+ +GTG +V L+ +I+ +
Sbjct: 589 ATGDEGIYDDLRNVLYTDSALNGEAVG---LAMGLVMLGTGNMKV----LEDMIQY-AHD 640
Query: 532 LQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDVLV 591
Q R L + +A+ G+++A D + L PDP +M AY G+
Sbjct: 641 TQHEKIVRGLAMGMALIMYGRQEAADELINGLLGDPDPTLRYGGIMTIALAYCGTSSNKA 700
Query: 592 VQEFLHV 598
V++ LHV
Sbjct: 701 VRKLLHV 707
Score = 64 (27.6 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 35/141 (24%), Positives = 64/141 (45%)
Query: 680 IFGQLGRYGEPTVRRA--VPLAIALC-SMSNPALNVIDVLNKYSHDLDEEVAHNAIFSMG 736
I G LG +PT+R + +A+A C + SN A+ + L+ D++++V A+ S+G
Sbjct: 669 INGLLGD-PDPTLRYGGIMTIALAYCGTSSNKAVRKL--LHVAVSDVNDDVRRVAVLSLG 725
Query: 737 LVGAGTNNA--RLATMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHTDR-QI 793
+ + + R+ +L + HV+ G + I+ T + + L P D
Sbjct: 726 FILFRKHQSVPRMVELLSESYNPHVRY-GAAMALGISCAGTGLDEAIDLLEPMLKDSTDF 784
Query: 794 LNPVALAGLLVVLTSFLDTKN 814
+ AL L +VL + N
Sbjct: 785 VRQGALIALAMVLVQQNEAMN 805
Score = 61 (26.5 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 29/124 (23%), Positives = 50/124 (40%)
Query: 690 PTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAHNAIFSMGLVGAGTN---NAR 746
P VR +A+ + ID+L D + V A+ ++ +V N N R
Sbjct: 748 PHVRYGAAMALGISCAGTGLDEAIDLLEPMLKDSTDFVRQGALIALAMVLVQQNEAMNPR 807
Query: 747 LA----TMLRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHTDRQILNPVALAGL 802
++ TM++ ++ H ++ F IA G+ G ++S T LN + G
Sbjct: 808 VSSLRKTMMKMVSDRH-EDAMAKFGCAIALGIIDAGGRNCTIS-LQTQTGNLNMPGIVGA 865
Query: 803 LVVL 806
V L
Sbjct: 866 AVFL 869
Score = 45 (20.9 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 22/79 (27%), Positives = 35/79 (44%)
Query: 73 VPMPLKFLRNHYGALKEACEKMTDQK-PKKLLCSIISVLAMSQDNVEQECLKYCLMAKQK 131
V +PL R G LK E++ +Q +K +I + ++D E L+ +M +
Sbjct: 202 VEVPLVLKRGVQGQLKAVIERLFEQCFLQKRYRQVIGIAIEAKD---LEVLRTAIMRASE 258
Query: 132 DVGDWGHEYVRQLEAEIAE 150
D E RQ E E+ E
Sbjct: 259 DAKQQNGES-RQSE-ELME 275
>UNIPROTKB|J9P4R4 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 Pfam:PF01851 EMBL:AAEX03014431
Ensembl:ENSCAFT00000044920 Uniprot:J9P4R4
Length = 701
Score = 141 (54.7 bits), Expect = 4.8e-06, Sum P(3) = 4.8e-06
Identities = 68/261 (26%), Positives = 113/261 (43%)
Query: 347 DSARHNL---ASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWD 403
D+ R+++ A+ N+F++ G + D+ + D +W+ + +A ASLG+I+
Sbjct: 358 DAVRNSVCHTATVIANSFMHCGTTSDQFL--RDNLEWLARATNWAKFTATASLGVIHKGH 415
Query: 404 VDGGLTPIDKYLY--TSED--YIKAGALLALGIVNCGVRNEC-DPALALLSDYVLNDSIT 458
L + YL TS Y + G L ALG+++ + D L L + ND +
Sbjct: 416 EKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKN-ASNDIV- 473
Query: 459 LRIXXXXXXXXXXXXTKRQEVVTLLLPVL-TDRKSTPEVVAFAAVAASLIYVGTGYHEVA 517
R T RQ+V LL L D T E A +A L+ +G+ + A
Sbjct: 474 -RHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEA---AGLALGLVMLGS---KNA 526
Query: 518 SAILQTLIELPVSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMM 577
AI + ++ E Q R L + +A+ G+ + D + +L DP + M
Sbjct: 527 QAI-EDMVGY-AQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 578 LKMCAYAGSGDVLVVQEFLHV 598
AY GSG+ ++ LHV
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHV 605
Score = 50 (22.7 bits), Expect = 4.8e-06, Sum P(3) = 4.8e-06
Identities = 15/67 (22%), Positives = 28/67 (41%)
Query: 692 VRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAHNAIFSMGLVGAGTNNARLATML 751
VRRA ++ P V++ S + V + A ++G+ AGT N + +
Sbjct: 614 VRRAAVESLGFILFRTPE-QCPSVVSLLSESYNPHVRYGADMALGICCAGTGNKKSPKPM 672
Query: 752 RQLAQYH 758
+ +H
Sbjct: 673 GSVLSWH 679
Score = 44 (20.5 bits), Expect = 4.8e-06, Sum P(3) = 4.8e-06
Identities = 9/45 (20%), Positives = 23/45 (51%)
Query: 285 LPDEMPDKNDLQIIMTNSHINDHFHSLARELDIMEPKTPEEVYKT 329
L +E P + + N+ +ND + ++ +D +E +E +++
Sbjct: 12 LDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRS 56
>UNIPROTKB|F1PX57 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042176 "regulation of protein catabolic
process" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 OMA:CVENAEL Pfam:PF01851
EMBL:AAEX03014431 Ensembl:ENSCAFT00000017372 Uniprot:F1PX57
Length = 953
Score = 141 (54.7 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 68/261 (26%), Positives = 113/261 (43%)
Query: 347 DSARHNL---ASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWD 403
D+ R+++ A+ N+F++ G + D+ + D +W+ + +A ASLG+I+
Sbjct: 358 DAVRNSVCHTATVIANSFMHCGTTSDQFL--RDNLEWLARATNWAKFTATASLGVIHKGH 415
Query: 404 VDGGLTPIDKYLY--TSED--YIKAGALLALGIVNCGVRNEC-DPALALLSDYVLNDSIT 458
L + YL TS Y + G L ALG+++ + D L L + ND +
Sbjct: 416 EKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKN-ASNDIV- 473
Query: 459 LRIXXXXXXXXXXXXTKRQEVVTLLLPVL-TDRKSTPEVVAFAAVAASLIYVGTGYHEVA 517
R T RQ+V LL L D T E A +A L+ +G+ + A
Sbjct: 474 -RHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEA---AGLALGLVMLGS---KNA 526
Query: 518 SAILQTLIELPVSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMM 577
AI + ++ E Q R L + +A+ G+ + D + +L DP + M
Sbjct: 527 QAI-EDMVGY-AQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 578 LKMCAYAGSGDVLVVQEFLHV 598
AY GSG+ ++ LHV
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHV 605
Score = 51 (23.0 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 25/118 (21%), Positives = 42/118 (35%)
Query: 675 EMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAHNAIFS 734
E + L P VR +A+ +C I++L ++D V A+ +
Sbjct: 631 EQCPSVVSLLSESYNPHVRYGADMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIA 690
Query: 735 MGLVGAGTNNARLATMLRQLAQYHVK--NTGH-----LFMVRIAQGLTHMGKGTVSLS 785
L+ + Q Q + K N H F +AQG+ G V++S
Sbjct: 691 SALIMIQQTEIT-CPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTIS 747
Score = 44 (20.5 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 9/45 (20%), Positives = 23/45 (51%)
Query: 285 LPDEMPDKNDLQIIMTNSHINDHFHSLARELDIMEPKTPEEVYKT 329
L +E P + + N+ +ND + ++ +D +E +E +++
Sbjct: 12 LDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRS 56
>UNIPROTKB|F1NUT6 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 Pfam:PF01851 IPI:IPI00598268
EMBL:AADN02020638 Ensembl:ENSGALT00000012419 ArrayExpress:F1NUT6
Uniprot:F1NUT6
Length = 955
Score = 141 (54.7 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 68/261 (26%), Positives = 113/261 (43%)
Query: 347 DSARHNL---ASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWD 403
D+ R+++ A+ N+F++ G + D+ + D +W+ + +A ASLG+I+
Sbjct: 358 DAVRNSVCHTATVIANSFMHCGTTSDQFL--RDNLEWLARATNWAKFTATASLGVIHKGH 415
Query: 404 VDGGLTPIDKYLY--TSED--YIKAGALLALGIVNCGVRNEC-DPALALLSDYVLNDSIT 458
L + YL TS Y + G L ALG+++ + D L L + ND +
Sbjct: 416 EKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKN-ASNDIV- 473
Query: 459 LRIXXXXXXXXXXXXTKRQEVVTLLLPVL-TDRKSTPEVVAFAAVAASLIYVGTGYHEVA 517
R T RQ+V LL L D T E A +A L+ +G+ + A
Sbjct: 474 -RHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEA---AGLALGLVMLGS---KNA 526
Query: 518 SAILQTLIELPVSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMM 577
AI + ++ E Q R L + +A+ G+ + D + +L DP + M
Sbjct: 527 QAI-EDMVGY-AQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 578 LKMCAYAGSGDVLVVQEFLHV 598
AY GSG+ ++ LHV
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHV 605
Score = 51 (23.0 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 26/118 (22%), Positives = 42/118 (35%)
Query: 675 EMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAHNAIFS 734
E + L P VR +A+ +C I++L ++D V A+ +
Sbjct: 631 EQCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIA 690
Query: 735 MGLVGAGTNNARL--ATMLRQLAQYHVKNTGH-----LFMVRIAQGLTHMGKGTVSLS 785
L+ + RQL V N H F +AQG+ G V++S
Sbjct: 691 SALIMIQQTEITCPKVSQFRQLYS-KVINDKHDDVMAKFGAILAQGILDAGGHNVTIS 747
Score = 44 (20.5 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 9/45 (20%), Positives = 23/45 (51%)
Query: 285 LPDEMPDKNDLQIIMTNSHINDHFHSLARELDIMEPKTPEEVYKT 329
L +E P + + N+ +ND + ++ +D +E +E +++
Sbjct: 12 LDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRS 56
>UNIPROTKB|E1C5P3 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502 GO:GO:0042176
GeneTree:ENSGT00550000074915 OMA:CVENAEL Pfam:PF01851
EMBL:AADN02020638 IPI:IPI00579067 Ensembl:ENSGALT00000012418
ArrayExpress:E1C5P3 Uniprot:E1C5P3
Length = 958
Score = 141 (54.7 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 68/261 (26%), Positives = 113/261 (43%)
Query: 347 DSARHNL---ASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWD 403
D+ R+++ A+ N+F++ G + D+ + D +W+ + +A ASLG+I+
Sbjct: 361 DAVRNSVCHTATVIANSFMHCGTTSDQFL--RDNLEWLARATNWAKFTATASLGVIHKGH 418
Query: 404 VDGGLTPIDKYLY--TSED--YIKAGALLALGIVNCGVRNEC-DPALALLSDYVLNDSIT 458
L + YL TS Y + G L ALG+++ + D L L + ND +
Sbjct: 419 EKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKN-ASNDIV- 476
Query: 459 LRIXXXXXXXXXXXXTKRQEVVTLLLPVL-TDRKSTPEVVAFAAVAASLIYVGTGYHEVA 517
R T RQ+V LL L D T E A +A L+ +G+ + A
Sbjct: 477 -RHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEA---AGLALGLVMLGS---KNA 529
Query: 518 SAILQTLIELPVSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMM 577
AI + ++ E Q R L + +A+ G+ + D + +L DP + M
Sbjct: 530 QAI-EDMVGY-AQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 587
Query: 578 LKMCAYAGSGDVLVVQEFLHV 598
AY GSG+ ++ LHV
Sbjct: 588 TVAMAYCGSGNNKAIRRLLHV 608
Score = 51 (23.0 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 26/118 (22%), Positives = 42/118 (35%)
Query: 675 EMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAHNAIFS 734
E + L P VR +A+ +C I++L ++D V A+ +
Sbjct: 634 EQCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIA 693
Query: 735 MGLVGAGTNNARL--ATMLRQLAQYHVKNTGH-----LFMVRIAQGLTHMGKGTVSLS 785
L+ + RQL V N H F +AQG+ G V++S
Sbjct: 694 SALIMIQQTEITCPKVSQFRQLYS-KVINDKHDDVMAKFGAILAQGILDAGGHNVTIS 750
Score = 44 (20.5 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 9/45 (20%), Positives = 23/45 (51%)
Query: 285 LPDEMPDKNDLQIIMTNSHINDHFHSLARELDIMEPKTPEEVYKT 329
L +E P + + N+ +ND + ++ +D +E +E +++
Sbjct: 12 LDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRS 56
>UNIPROTKB|A7MBA2 [details] [associations]
symbol:PSMD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0000502 GO:GO:0042176 eggNOG:COG5116
GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403 KO:K03032
OMA:CVENAEL Pfam:PF01851 CTD:5707 HOVERGEN:HBG007543
OrthoDB:EOG4X97GG EMBL:DAAA02006191 EMBL:BC151445 IPI:IPI00714855
RefSeq:NP_001094547.1 UniGene:Bt.27989 STRING:A7MBA2
Ensembl:ENSBTAT00000006754 GeneID:511803 KEGG:bta:511803
InParanoid:A7MBA2 NextBio:20870109 Uniprot:A7MBA2
Length = 953
Score = 141 (54.7 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 68/261 (26%), Positives = 113/261 (43%)
Query: 347 DSARHNL---ASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWD 403
D+ R+++ A+ N+F++ G + D+ + D +W+ + +A ASLG+I+
Sbjct: 358 DAVRNSVCHTATVIANSFMHCGTTSDQFL--RDNLEWLARATNWAKFTATASLGVIHKGH 415
Query: 404 VDGGLTPIDKYLY--TSED--YIKAGALLALGIVNCGVRNEC-DPALALLSDYVLNDSIT 458
L + YL TS Y + G L ALG+++ + D L L + ND +
Sbjct: 416 EKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKN-ASNDIV- 473
Query: 459 LRIXXXXXXXXXXXXTKRQEVVTLLLPVL-TDRKSTPEVVAFAAVAASLIYVGTGYHEVA 517
R T RQ+V LL L D T E A +A L+ +G+ + A
Sbjct: 474 -RHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEA---AGLALGLVMLGS---KNA 526
Query: 518 SAILQTLIELPVSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMM 577
AI + ++ E Q R L + +A+ G+ + D + +L DP + M
Sbjct: 527 QAI-EDMVGY-AQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 578 LKMCAYAGSGDVLVVQEFLHV 598
AY GSG+ ++ LHV
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHV 605
Score = 51 (23.0 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 25/118 (21%), Positives = 42/118 (35%)
Query: 675 EMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAHNAIFS 734
E + L P VR +A+ +C I++L ++D V A+ +
Sbjct: 631 EQCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIA 690
Query: 735 MGLVGAGTNNARLATMLRQLAQYHVK--NTGH-----LFMVRIAQGLTHMGKGTVSLS 785
L+ + Q Q + K N H F +AQG+ G V++S
Sbjct: 691 SALIMIQQTEIT-CPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTIS 747
Score = 44 (20.5 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 9/45 (20%), Positives = 23/45 (51%)
Query: 285 LPDEMPDKNDLQIIMTNSHINDHFHSLARELDIMEPKTPEEVYKT 329
L +E P + + N+ +ND + ++ +D +E +E +++
Sbjct: 12 LDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRS 56
Score = 39 (18.8 bits), Expect = 1.8e-05, Sum P(4) = 1.8e-05
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 888 LATDDYVPLTPVMEGFVILRKKDKDD 913
L T Y P P+ G +I+ K +D
Sbjct: 895 LETCRYQPFKPLSIGGIIILKDTSED 920
>ZFIN|ZDB-GENE-040426-810 [details] [associations]
symbol:psmd1 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 1" species:7955 "Danio rerio" [GO:0000502
"proteasome complex" evidence=IEA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 INTERPRO:IPR002015
ZFIN:ZDB-GENE-040426-810 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0000502
GO:GO:0042176 GeneTree:ENSGT00550000074915 Pfam:PF01851
EMBL:BX571973 EMBL:CABZ01044354 IPI:IPI00506005
Ensembl:ENSDART00000144100 ArrayExpress:F1QY43 Uniprot:F1QY43
Length = 959
Score = 140 (54.3 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 67/261 (25%), Positives = 114/261 (43%)
Query: 347 DSARHNL---ASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWD 403
D+ R+++ A+ N+F++ G + D+ + + +W+ + +A ASLG+I+
Sbjct: 354 DAVRNSVCHTATVIANSFMHTGTTSDQFL--RENLEWLARATNWAKFTATASLGVIHKGH 411
Query: 404 VDGGLTPIDKYLY--TSED--YIKAGALLALGIVNCGVRNEC-DPALALLSDYVLNDSIT 458
L + YL TS Y + G L ALG+++ + D L+ L + ND +
Sbjct: 412 EKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLSQLKN-ASNDIV- 469
Query: 459 LRIXXXXXXXXXXXXTKRQEVVTLLLPVL-TDRKSTPEVVAFAAVAASLIYVGTGYHEVA 517
R T RQ+V LL L D T E A +A L+ +G+ + A
Sbjct: 470 -RHGGALGLGLAALGTARQDVYDLLKSNLYQDDAVTGEA---AGLALGLVMLGS---KSA 522
Query: 518 SAILQTLIELPVSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMM 577
AI + ++ E Q R L + +A+ G+ + D + +L DP + M
Sbjct: 523 QAI-EDMVGY-AQETQHEKILRGLAVGIAMVMYGRMEEADALIESLCRDKDPILRRSGMY 580
Query: 578 LKMCAYAGSGDVLVVQEFLHV 598
AY GSG+ ++ LHV
Sbjct: 581 TVAMAYCGSGNNKAIRRLLHV 601
Score = 54 (24.1 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 32/142 (22%), Positives = 51/142 (35%)
Query: 675 EMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAHNAIFS 734
E + L P VR +A+ +C I++L ++D V A+ +
Sbjct: 627 EQCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIA 686
Query: 735 MGLVGAGTNNARLATMLRQLAQYHVK--NTGH-----LFMVRIAQGLTHMGKGTVSLSPF 787
L+ + Q Q + K N H F +AQG+ G V++S
Sbjct: 687 SALIMIQQTEVT-CPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGVLDAGGRNVTISLQ 745
Query: 788 HTDRQILNPVALAGLLVVLTSF 809
P ++ GLLV T F
Sbjct: 746 SRTGHTHMP-SVVGLLV-FTQF 765
Score = 40 (19.1 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 6 AVPDKDEKVTKGKGEKNPDEMSEEDK 31
AVP T +K+ D M EDK
Sbjct: 273 AVPGSTNTGTVPTPDKDSDSMETEDK 298
Score = 40 (19.1 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 14/46 (30%), Positives = 21/46 (45%)
Query: 120 ECLKYCLMAKQK-DVGDWGHEYVRQLEAEIAEEWATNKYEKPQLLE 164
E L Y L A +V D EYV + A+ + + + E +L E
Sbjct: 71 ESLSYALGAGDLFNVND-DSEYVETIIAKCIDHYTKQRVENAELPE 115
Score = 40 (19.1 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 8/45 (17%), Positives = 22/45 (48%)
Query: 285 LPDEMPDKNDLQIIMTNSHINDHFHSLARELDIMEPKTPEEVYKT 329
L ++ P + + NS +ND + ++ + +E +E +++
Sbjct: 7 LDEDEPQLKEFALHKLNSVVNDFWAEISESVGKIEVLYEDETFRS 51
Score = 38 (18.4 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 13/51 (25%), Positives = 22/51 (43%)
Query: 5 IAVPDKDEKV--TKGKGEKNPDEMSEEDKRLQEDLNMLVEKIKGSDKHLYL 53
+ PDKD T+ K +P + + K +D N + KI + + L
Sbjct: 283 VPTPDKDSDSMETEDKAGSSPAGKTADAKDEPKDQNSKMIKILSGEMAIEL 333
>UNIPROTKB|Q99460 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9606 "Homo sapiens" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0005838 "proteasome regulatory particle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0030234 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
SUPFAM:SSF48371 Reactome:REACT_21300 GO:GO:0006977
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042981 GO:GO:0044281
GO:GO:0000082 EMBL:AC009407 GO:GO:0051436 GO:GO:0000216
GO:GO:0042176 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 DrugBank:DB00188
GO:GO:0005838 eggNOG:COG5116 KO:K03032 OMA:CVENAEL Pfam:PF01851
CTD:5707 HOVERGEN:HBG007543 EMBL:D44466 EMBL:BC001053 EMBL:BC014013
EMBL:BC039845 EMBL:BC047897 EMBL:BC064398 EMBL:BC073833
EMBL:BC094720 EMBL:BC112344 EMBL:BC114434 IPI:IPI00299608
IPI:IPI00456695 RefSeq:NP_001177966.1 RefSeq:NP_002798.2
UniGene:Hs.3887 ProteinModelPortal:Q99460 SMR:Q99460 DIP:DIP-27548N
IntAct:Q99460 MINT:MINT-1160606 STRING:Q99460 PhosphoSite:Q99460
DMDM:51704332 PaxDb:Q99460 PRIDE:Q99460 Ensembl:ENST00000308696
Ensembl:ENST00000373635 Ensembl:ENST00000409643 GeneID:5707
KEGG:hsa:5707 UCSC:uc002vrm.2 UCSC:uc002vrn.2 GeneCards:GC02P231921
HGNC:HGNC:9554 HPA:CAB021092 neXtProt:NX_Q99460 PharmGKB:PA33899
InParanoid:Q99460 OrthoDB:EOG4X97GG PhylomeDB:Q99460
ChEMBL:CHEMBL1934 ChiTaRS:PSMD1 GenomeRNAi:5707 NextBio:22174
ArrayExpress:Q99460 Bgee:Q99460 CleanEx:HS_PSMD1
Genevestigator:Q99460 GermOnline:ENSG00000173692 Uniprot:Q99460
Length = 953
Score = 141 (54.7 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 68/261 (26%), Positives = 113/261 (43%)
Query: 347 DSARHNL---ASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWD 403
D+ R+++ A+ N+F++ G + D+ + D +W+ + +A ASLG+I+
Sbjct: 358 DAVRNSVCHTATVIANSFMHCGTTSDQFL--RDNLEWLARATNWAKFTATASLGVIHKGH 415
Query: 404 VDGGLTPIDKYLY--TSED--YIKAGALLALGIVNCGVRNEC-DPALALLSDYVLNDSIT 458
L + YL TS Y + G L ALG+++ + D L L + ND +
Sbjct: 416 EKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKN-ASNDIV- 473
Query: 459 LRIXXXXXXXXXXXXTKRQEVVTLLLPVL-TDRKSTPEVVAFAAVAASLIYVGTGYHEVA 517
R T RQ+V LL L D T E A +A L+ +G+ + A
Sbjct: 474 -RHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEA---AGLALGLVMLGS---KNA 526
Query: 518 SAILQTLIELPVSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMM 577
AI + ++ E Q R L + +A+ G+ + D + +L DP + M
Sbjct: 527 QAI-EDMVGY-AQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 578 LKMCAYAGSGDVLVVQEFLHV 598
AY GSG+ ++ LHV
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHV 605
Score = 51 (23.0 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 25/118 (21%), Positives = 42/118 (35%)
Query: 675 EMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAHNAIFS 734
E + L P VR +A+ +C I++L ++D V A+ +
Sbjct: 631 EQCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIA 690
Query: 735 MGLVGAGTNNARLATMLRQLAQYHVK--NTGH-----LFMVRIAQGLTHMGKGTVSLS 785
L+ + Q Q + K N H F +AQG+ G V++S
Sbjct: 691 SALIMIQQTEIT-CPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTIS 747
Score = 41 (19.5 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 8/45 (17%), Positives = 23/45 (51%)
Query: 285 LPDEMPDKNDLQIIMTNSHINDHFHSLARELDIMEPKTPEEVYKT 329
L ++ P + + N+ +ND + ++ +D +E +E +++
Sbjct: 12 LDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRS 56
Score = 37 (18.1 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 6 AVPDKDEKVTKGKGEKNPDEMSEEDK 31
+VP T EK+ D M E+K
Sbjct: 277 SVPGSTNTGTVPGSEKDSDSMETEEK 302
>UNIPROTKB|Q5R5S4 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9601 "Pongo abelii" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 GeneTree:ENSGT00550000074915 KO:K03032 OMA:CVENAEL
Pfam:PF01851 CTD:5707 HOVERGEN:HBG007543 OrthoDB:EOG4X97GG
EMBL:CR860782 RefSeq:NP_001126695.1 UniGene:Pab.18654
ProteinModelPortal:Q5R5S4 PRIDE:Q5R5S4 Ensembl:ENSPPYT00000015422
GeneID:100173695 KEGG:pon:100173695 InParanoid:Q5R5S4
Uniprot:Q5R5S4
Length = 953
Score = 141 (54.7 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 68/261 (26%), Positives = 113/261 (43%)
Query: 347 DSARHNL---ASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWD 403
D+ R+++ A+ N+F++ G + D+ + D +W+ + +A ASLG+I+
Sbjct: 358 DAVRNSVCHTATVIANSFMHCGTTSDQFL--RDNLEWLARATNWAKFTATASLGVIHKGH 415
Query: 404 VDGGLTPIDKYLY--TSED--YIKAGALLALGIVNCGVRNEC-DPALALLSDYVLNDSIT 458
L + YL TS Y + G L ALG+++ + D L L + ND +
Sbjct: 416 EKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKN-ASNDIV- 473
Query: 459 LRIXXXXXXXXXXXXTKRQEVVTLLLPVL-TDRKSTPEVVAFAAVAASLIYVGTGYHEVA 517
R T RQ+V LL L D T E A +A L+ +G+ + A
Sbjct: 474 -RHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEA---AGLALGLVMLGS---KNA 526
Query: 518 SAILQTLIELPVSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMM 577
AI + ++ E Q R L + +A+ G+ + D + +L DP + M
Sbjct: 527 QAI-EDMVGY-AQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 578 LKMCAYAGSGDVLVVQEFLHV 598
AY GSG+ ++ LHV
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHV 605
Score = 51 (23.0 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 25/118 (21%), Positives = 42/118 (35%)
Query: 675 EMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAHNAIFS 734
E + L P VR +A+ +C I++L ++D V A+ +
Sbjct: 631 EQCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIA 690
Query: 735 MGLVGAGTNNARLATMLRQLAQYHVK--NTGH-----LFMVRIAQGLTHMGKGTVSLS 785
L+ + Q Q + K N H F +AQG+ G V++S
Sbjct: 691 SALIMIQQTEIT-CPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTIS 747
Score = 41 (19.5 bits), Expect = 2.3e-05, Sum P(3) = 2.3e-05
Identities = 8/45 (17%), Positives = 23/45 (51%)
Query: 285 LPDEMPDKNDLQIIMTNSHINDHFHSLARELDIMEPKTPEEVYKT 329
L ++ P + + N+ +ND + ++ +D +E +E +++
Sbjct: 12 LDEDEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRS 56
Score = 37 (18.1 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 6 AVPDKDEKVTKGKGEKNPDEMSEEDK 31
+VP T EK+ D M E+K
Sbjct: 277 SVPGSTNTGTVPGSEKDSDSMETEEK 302
>UNIPROTKB|Q5F418 [details] [associations]
symbol:PSMD1 "26S proteasome non-ATPase regulatory subunit
1" species:9031 "Gallus gallus" [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 eggNOG:COG5116 HOGENOM:HOG000189403 KO:K03032
Pfam:PF01851 EMBL:AJ851482 IPI:IPI00598268 RefSeq:NP_001012618.1
UniGene:Gga.12538 ProteinModelPortal:Q5F418 STRING:Q5F418
PRIDE:Q5F418 GeneID:424926 KEGG:gga:424926 CTD:5707
HOVERGEN:HBG007543 NextBio:20827189 Uniprot:Q5F418
Length = 955
Score = 141 (54.7 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 68/261 (26%), Positives = 113/261 (43%)
Query: 347 DSARHNL---ASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWD 403
D+ R+++ A+ N+F++ G + D+ + D +W+ + +A ASLG+I+
Sbjct: 358 DAVRNSVCHTATVIANSFMHCGTTSDQFL--RDNLEWLARATNWAKFTATASLGVIHKGH 415
Query: 404 VDGGLTPIDKYLY--TSED--YIKAGALLALGIVNCGVRNEC-DPALALLSDYVLNDSIT 458
L + YL TS Y + G L ALG+++ + D L L + ND +
Sbjct: 416 EKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKN-ASNDIV- 473
Query: 459 LRIXXXXXXXXXXXXTKRQEVVTLLLPVL-TDRKSTPEVVAFAAVAASLIYVGTGYHEVA 517
R T RQ+V LL L D T E A +A L+ +G+ + A
Sbjct: 474 -RHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEA---AGLALGLVMLGS---KNA 526
Query: 518 SAILQTLIELPVSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMM 577
AI + ++ E Q R L + +A+ G+ + D + +L DP + M
Sbjct: 527 QAI-EDMVGY-AQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 578 LKMCAYAGSGDVLVVQEFLHV 598
AY GSG+ ++ LHV
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHV 605
Score = 48 (22.0 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 26/118 (22%), Positives = 41/118 (34%)
Query: 675 EMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAHNAIFS 734
E + L P VR +A+ +C I++L ++D V A+ +
Sbjct: 631 EQCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIA 690
Query: 735 MGLVGAGTNNARL--ATMLRQLAQYHVKNTGH-----LFMVRIAQGLTHMGKGTVSLS 785
L+ + RQL V N H F +AQG+ G V +S
Sbjct: 691 SALIMIQQTEITCPKVSQFRQLYS-KVINDKHDDVMAKFGAILAQGILDAGGHNVIIS 747
Score = 44 (20.5 bits), Expect = 2.4e-05, Sum P(3) = 2.4e-05
Identities = 9/45 (20%), Positives = 23/45 (51%)
Query: 285 LPDEMPDKNDLQIIMTNSHINDHFHSLARELDIMEPKTPEEVYKT 329
L +E P + + N+ +ND + ++ +D +E +E +++
Sbjct: 12 LDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRS 56
>MGI|MGI:1917497 [details] [associations]
symbol:Psmd1 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 1" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] [GO:0030234 "enzyme regulator activity" evidence=IEA]
[GO:0042176 "regulation of protein catabolic process" evidence=IEA]
InterPro:IPR016024 InterPro:IPR016642 PIRSF:PIRSF015947
MGI:MGI:1917497 INTERPRO:IPR002015 GO:GO:0030234 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790 GO:GO:0042176
GO:GO:0022624 eggNOG:COG5116 GeneTree:ENSGT00550000074915
HOGENOM:HOG000189403 KO:K03032 OMA:CVENAEL Pfam:PF01851 CTD:5707
HOVERGEN:HBG007543 OrthoDB:EOG4X97GG EMBL:AK153386 EMBL:AK159123
EMBL:BC138526 EMBL:BC138527 IPI:IPI00267295 RefSeq:NP_081633.1
UniGene:Mm.280013 ProteinModelPortal:Q3TXS7 SMR:Q3TXS7
IntAct:Q3TXS7 STRING:Q3TXS7 PhosphoSite:Q3TXS7 PaxDb:Q3TXS7
PRIDE:Q3TXS7 Ensembl:ENSMUST00000027432 GeneID:70247 KEGG:mmu:70247
UCSC:uc007buy.1 InParanoid:B2RRP8 NextBio:331246 Bgee:Q3TXS7
Genevestigator:Q3TXS7 Uniprot:Q3TXS7
Length = 953
Score = 141 (54.7 bits), Expect = 2.9e-05, Sum P(4) = 2.9e-05
Identities = 68/261 (26%), Positives = 113/261 (43%)
Query: 347 DSARHNL---ASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWD 403
D+ R+++ A+ N+F++ G + D+ + D +W+ + +A ASLG+I+
Sbjct: 358 DAVRNSVCHTATVIANSFMHCGTTSDQFL--RDNLEWLARATNWAKFTATASLGVIHKGH 415
Query: 404 VDGGLTPIDKYLY--TSED--YIKAGALLALGIVNCGVRNEC-DPALALLSDYVLNDSIT 458
L + YL TS Y + G L ALG+++ + D L L + ND +
Sbjct: 416 EKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKN-ASNDIV- 473
Query: 459 LRIXXXXXXXXXXXXTKRQEVVTLLLPVL-TDRKSTPEVVAFAAVAASLIYVGTGYHEVA 517
R T RQ+V LL L D T E A +A L+ +G+ + A
Sbjct: 474 -RHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEA---AGLALGLVMLGS---KNA 526
Query: 518 SAILQTLIELPVSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMM 577
AI + ++ E Q R L + +A+ G+ + D + +L DP + M
Sbjct: 527 QAI-EDMVGY-AQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 578 LKMCAYAGSGDVLVVQEFLHV 598
AY GSG+ ++ LHV
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHV 605
Score = 51 (23.0 bits), Expect = 2.9e-05, Sum P(4) = 2.9e-05
Identities = 25/118 (21%), Positives = 42/118 (35%)
Query: 675 EMSTRIFGQLGRYGEPTVRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAHNAIFS 734
E + L P VR +A+ +C I++L ++D V A+ +
Sbjct: 631 EQCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIA 690
Query: 735 MGLVGAGTNNARLATMLRQLAQYHVK--NTGH-----LFMVRIAQGLTHMGKGTVSLS 785
L+ + Q Q + K N H F +AQG+ G V++S
Sbjct: 691 SALIMIQQTEIT-CPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTIS 747
Score = 44 (20.5 bits), Expect = 2.9e-05, Sum P(4) = 2.9e-05
Identities = 9/45 (20%), Positives = 23/45 (51%)
Query: 285 LPDEMPDKNDLQIIMTNSHINDHFHSLARELDIMEPKTPEEVYKT 329
L +E P + + N+ +ND + ++ +D +E +E +++
Sbjct: 12 LDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRS 56
Score = 37 (18.1 bits), Expect = 2.9e-05, Sum P(4) = 2.9e-05
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 877 PVLLAVGERAELATDDYVPLTPVMEGFVILRKKDKDD 913
P L V E T Y P P+ G +I+ K +D
Sbjct: 886 PAQLKVLSMTE--TCRYQPFKPLSIGGIIILKDTSED 920
>UNIPROTKB|F1LRN6 [details] [associations]
symbol:Psmd1 "26S proteasome non-ATPase regulatory subunit
1" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015 GO:GO:0030234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 Pfam:PF01851 IPI:IPI00949424
PRIDE:F1LRN6 Ensembl:ENSRNOT00000066613 ArrayExpress:F1LRN6
Uniprot:F1LRN6
Length = 952
Score = 141 (54.7 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 68/261 (26%), Positives = 113/261 (43%)
Query: 347 DSARHNL---ASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWD 403
D+ R+++ A+ N+F++ G + D+ + D +W+ + +A ASLG+I+
Sbjct: 357 DAVRNSVCHTATVIANSFMHCGTTSDQFL--RDNLEWLARATNWAKFTATASLGVIHKGH 414
Query: 404 VDGGLTPIDKYLY--TSED--YIKAGALLALGIVNCGVRNEC-DPALALLSDYVLNDSIT 458
L + YL TS Y + G L ALG+++ + D L L + ND +
Sbjct: 415 EKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKN-ASNDIV- 472
Query: 459 LRIXXXXXXXXXXXXTKRQEVVTLLLPVL-TDRKSTPEVVAFAAVAASLIYVGTGYHEVA 517
R T RQ+V LL L D T E A +A L+ +G+ + A
Sbjct: 473 -RHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEA---AGLALGLVMLGS---KNA 525
Query: 518 SAILQTLIELPVSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMM 577
AI + ++ E Q R L + +A+ G+ + D + +L DP + M
Sbjct: 526 QAI-EDMVGY-AQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 583
Query: 578 LKMCAYAGSGDVLVVQEFLHV 598
AY GSG+ ++ LHV
Sbjct: 584 TVAMAYCGSGNNKAIRRLLHV 604
Score = 50 (22.7 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 692 VRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAHNAIFSMGLVGAGTNNARLATML 751
VRRA ++ P V++ S + V + A ++G+ AGT N +L
Sbjct: 613 VRRAAVESLGFILFRTPE-QCPSVVSLLSESYNPHVRYGAAMALGVCCAGTGNKEAINLL 671
Query: 752 RQL 754
+
Sbjct: 672 EPM 674
Score = 44 (20.5 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 9/45 (20%), Positives = 23/45 (51%)
Query: 285 LPDEMPDKNDLQIIMTNSHINDHFHSLARELDIMEPKTPEEVYKT 329
L +E P + + N+ +ND + ++ +D +E +E +++
Sbjct: 11 LDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRS 55
Score = 37 (18.1 bits), Expect = 3.5e-05, Sum P(4) = 3.5e-05
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 877 PVLLAVGERAELATDDYVPLTPVMEGFVILRKKDKDD 913
P L V E T Y P P+ G +I+ K +D
Sbjct: 885 PAQLKVLSMTE--TCRYQPFKPLSIGGIIILKDTSED 919
>UNIPROTKB|G3V8B6 [details] [associations]
symbol:Psmd1 "26S proteasome non-ATPase regulatory subunit
1" species:10116 "Rattus norvegicus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0030234 "enzyme regulator activity"
evidence=IEA] [GO:0042176 "regulation of protein catabolic process"
evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015 GO:GO:0030234
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0050790
GO:GO:0000502 GO:GO:0042176 GeneTree:ENSGT00550000074915
OMA:CVENAEL Pfam:PF01851 UniGene:Rn.2891 EMBL:CH474004
Ensembl:ENSRNOT00000024306 Uniprot:G3V8B6
Length = 953
Score = 141 (54.7 bits), Expect = 3.6e-05, Sum P(4) = 3.6e-05
Identities = 68/261 (26%), Positives = 113/261 (43%)
Query: 347 DSARHNL---ASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWD 403
D+ R+++ A+ N+F++ G + D+ + D +W+ + +A ASLG+I+
Sbjct: 358 DAVRNSVCHTATVIANSFMHCGTTSDQFL--RDNLEWLARATNWAKFTATASLGVIHKGH 415
Query: 404 VDGGLTPIDKYLY--TSED--YIKAGALLALGIVNCGVRNEC-DPALALLSDYVLNDSIT 458
L + YL TS Y + G L ALG+++ + D L L + ND +
Sbjct: 416 EKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKN-ASNDIV- 473
Query: 459 LRIXXXXXXXXXXXXTKRQEVVTLLLPVL-TDRKSTPEVVAFAAVAASLIYVGTGYHEVA 517
R T RQ+V LL L D T E A +A L+ +G+ + A
Sbjct: 474 -RHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEA---AGLALGLVMLGS---KNA 526
Query: 518 SAILQTLIELPVSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMM 577
AI + ++ E Q R L + +A+ G+ + D + +L DP + M
Sbjct: 527 QAI-EDMVGY-AQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 578 LKMCAYAGSGDVLVVQEFLHV 598
AY GSG+ ++ LHV
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHV 605
Score = 50 (22.7 bits), Expect = 3.6e-05, Sum P(4) = 3.6e-05
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 692 VRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAHNAIFSMGLVGAGTNNARLATML 751
VRRA ++ P V++ S + V + A ++G+ AGT N +L
Sbjct: 614 VRRAAVESLGFILFRTPE-QCPSVVSLLSESYNPHVRYGAAMALGVCCAGTGNKEAINLL 672
Query: 752 RQL 754
+
Sbjct: 673 EPM 675
Score = 44 (20.5 bits), Expect = 3.6e-05, Sum P(4) = 3.6e-05
Identities = 9/45 (20%), Positives = 23/45 (51%)
Query: 285 LPDEMPDKNDLQIIMTNSHINDHFHSLARELDIMEPKTPEEVYKT 329
L +E P + + N+ +ND + ++ +D +E +E +++
Sbjct: 12 LDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRS 56
Score = 37 (18.1 bits), Expect = 3.6e-05, Sum P(4) = 3.6e-05
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 877 PVLLAVGERAELATDDYVPLTPVMEGFVILRKKDKDD 913
P L V E T Y P P+ G +I+ K +D
Sbjct: 886 PAQLKVLSMTE--TCRYQPFKPLSIGGIIILKDTSED 920
>SGD|S000001337 [details] [associations]
symbol:RPN2 "Subunit of the 26S proteasome" species:4932
"Saccharomyces cerevisiae" [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IMP;IPI] [GO:0034515 "proteasome
storage granule" evidence=IDA] [GO:0030234 "enzyme regulator
activity" evidence=IEA] [GO:0042176 "regulation of protein
catabolic process" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0004175 "endopeptidase activity"
evidence=IMP] [GO:0030674 "protein binding, bridging" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043248 "proteasome
assembly" evidence=IGI] [GO:0050790 "regulation of catalytic
activity" evidence=IEA] InterPro:IPR016024 InterPro:IPR016642
PIRSF:PIRSF015947 SGD:S000001337 INTERPRO:IPR002015 GO:GO:0005634
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:BK006942 GO:GO:0050790 GO:GO:0043248 GO:GO:0006511 EMBL:Z37997
GO:GO:0042176 GO:GO:0034515 GO:GO:0008540 PDB:4B4T PDBsum:4B4T
eggNOG:COG5116 GeneTree:ENSGT00550000074915 HOGENOM:HOG000189403
KO:K03032 OMA:CVENAEL Pfam:PF01851 OrthoDB:EOG4KD9V5 EMBL:L06321
PIR:S48369 RefSeq:NP_012190.1 PDB:4ADY PDBsum:4ADY
ProteinModelPortal:P32565 SMR:P32565 DIP:DIP-4638N IntAct:P32565
MINT:MINT-539880 STRING:P32565 PaxDb:P32565 PeptideAtlas:P32565
EnsemblFungi:YIL075C GeneID:854735 KEGG:sce:YIL075C NextBio:977437
Genevestigator:P32565 GermOnline:YIL075C Uniprot:P32565
Length = 945
Score = 132 (51.5 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 106/489 (21%), Positives = 195/489 (39%)
Query: 140 YVRQLEAEIA--EEWATNKYEKPQLLELIEDIIQFDMKHNAEIQACDLLMEIDHLELLDK 197
YV++ + E++ T P+L + E +I+ +K + A + +E L++++
Sbjct: 109 YVQEASKQYTKDEQFYTKDIIDPKLTSIFERMIEKCLKASELKLALGIALEGYRLDIIES 168
Query: 198 HM------DVTNYP-RVCLYLSNCALYVEEPERSVITNGVLNNYLKF-KEYPRA--LTL- 246
+ D T+ ++ YL A + S + +L F P LTL
Sbjct: 169 ALKSKLDQDSTSENVKIINYLLTLA--ITTVTNSKFRSSILRKSFDFLMNMPNCDYLTLN 226
Query: 247 --ALQLNDEPSVLKIFQLCEDPVVRKQLAYMAGRQQITIELPDEMPDKNDLQIIMTNSHI 304
+ LND L++F+ ++ A QI +L + L+I++T
Sbjct: 227 KVVVNLNDAGLALQLFKKLKE---ENDEGLSA---QIAFDLVSSASQQL-LEILVTELTA 279
Query: 305 NDHFHSLARELDIMEPKTPEEVYKTWLEN-------IVLRPTYNLDVPVDSARHNLASTF 357
+ +L L+I+ + Y T+L N ++ + +LD S H S
Sbjct: 280 QGYDPAL---LNILSGLPTCDYYNTFLLNNKNIDIGLLNKSKSSLDGKF-SLFHTAVSV- 334
Query: 358 VNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWDVDGGLTPIDKYL-- 415
N F++AG + + + W+ K + +A ASLG+I+ ++ G + YL
Sbjct: 335 ANGFMHAGTTDNSFIKAN--LPWLGKAQNWAKFTATASLGVIHKGNLLEGKKVMAPYLPG 392
Query: 416 -YTSEDYIKAGALLALGIVNCGV-RNECDPALALL---SDYVLNDSITLRIXXXXXXXXX 470
S +IK G+L LG++ G R+ D ++ S ++ + + +
Sbjct: 393 SRASSRFIKGGSLYGLGLIYAGFGRDTTDYLKNIIVENSGTSGDEDVDVLLHGASLGIGL 452
Query: 471 XXXTKRQ-EVVTLLLPVLTDRKSTPEVVAFAAVAASLIYVGTGYHEVASAILQTLIELPV 529
EV L VL + +T A A+ L +GTG E + T +
Sbjct: 453 AAMGSANIEVYEALKEVLYNDSATSGEAA--ALGMGLCMLGTGKPEAIHDMF-TYSQ--- 506
Query: 530 SELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMMLKMCAYAGSGDV 589
E Q G+ +R L + LA+ G+++ D + + + AYAG+G+
Sbjct: 507 -ETQHGNITRGLAVGLALINYGRQELADDLITKMLASDESLLRYGGAFTIALAYAGTGNN 565
Query: 590 LVVQEFLHV 598
V+ LHV
Sbjct: 566 SAVKRLLHV 574
Score = 54 (24.1 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 31/121 (25%), Positives = 53/121 (43%)
Query: 695 AVPLAIALCSMS-NPALNVIDVLNKYSHDLDEEVAHNAIFSMGLVGAGTN-NARLATM-- 750
A L IA A++V+D L K D + A A+ SM L+ N ++A +
Sbjct: 622 AFALGIACAGKGLQSAIDVLDPLTKDPVDFVRQAAMIAL-SMILIQQTEKLNPQVADINK 680
Query: 751 --LRQLAQYHVKNTGHLFMVRIAQGLTHMGKGTVSLSPFHTDRQILNPVALAGLLVVLTS 808
L + H + F +AQG+ + G V++ + D L+ ++ GL V+ +
Sbjct: 681 NFLSVITNKHQEGLAK-FGACVAQGIMNAGGRNVTIQLENADTGTLDTKSVVGL-VMFSQ 738
Query: 809 F 809
F
Sbjct: 739 F 739
>RGD|621669 [details] [associations]
symbol:Psmd1 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 1" species:10116 "Rattus norvegicus" [GO:0022624
"proteasome accessory complex" evidence=ISO;ISS] [GO:0030234
"enzyme regulator activity" evidence=IEA] [GO:0042176 "regulation
of protein catabolic process" evidence=IEA] InterPro:IPR016024
InterPro:IPR016642 PIRSF:PIRSF015947 RGD:621669 INTERPRO:IPR002015
GO:GO:0030234 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
GO:GO:0050790 GO:GO:0042176 GO:GO:0022624 eggNOG:COG5116
HOGENOM:HOG000189403 KO:K03032 Pfam:PF01851 CTD:5707
HOVERGEN:HBG007543 OrthoDB:EOG4X97GG EMBL:AJ006340 IPI:IPI00212512
RefSeq:NP_114184.1 UniGene:Rn.2891 ProteinModelPortal:O88761
IntAct:O88761 STRING:O88761 PhosphoSite:O88761 PRIDE:O88761
GeneID:83806 KEGG:rno:83806 UCSC:RGD:621669 InParanoid:O88761
NextBio:616403 ArrayExpress:O88761 Genevestigator:O88761
GermOnline:ENSRNOG00000017730 Uniprot:O88761
Length = 953
Score = 137 (53.3 bits), Expect = 9.2e-05, Sum P(4) = 9.2e-05
Identities = 67/261 (25%), Positives = 112/261 (42%)
Query: 347 DSARHNL---ASTFVNAFVNAGFSRDKLVSVEDGNKWMYKNKQHGMLSAAASLGLIYLWD 403
D+ R+++ A+ N+F++ G + D+ + D +W+ + +A ASLG+I+
Sbjct: 358 DAVRNSVCHTATVIANSFMHCGTTSDQFL--RDNLEWLARATNWAKFTATASLGVIHKGH 415
Query: 404 VDGGLTPIDKYLY--TSED--YIKAGALLALGIVNCGVRNEC-DPALALLSDYVLNDSIT 458
L + YL TS Y + G L ALG+++ + D L L + ND +
Sbjct: 416 EKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKN-ASNDIV- 473
Query: 459 LRIXXXXXXXXXXXXTKRQEVVTLLLPVL-TDRKSTPEVVAFAAVAASLIYVGTGYHEVA 517
R T RQ+V LL L D T E A +A L+ +G+ +
Sbjct: 474 -RHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEA---AGLALGLVMLGS---KNT 526
Query: 518 SAILQTLIELPVSELQDGHYSRFLPLALAITYLGKKDAIDTTLAALEVLPDPFRSMAKMM 577
AI + ++ E Q R L + +A+ G+ + D + +L DP + M
Sbjct: 527 QAI-EDMVGY-AQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMY 584
Query: 578 LKMCAYAGSGDVLVVQEFLHV 598
AY GSG+ ++ LHV
Sbjct: 585 TVAMAYCGSGNNKAIRRLLHV 605
Score = 50 (22.7 bits), Expect = 9.2e-05, Sum P(4) = 9.2e-05
Identities = 15/63 (23%), Positives = 26/63 (41%)
Query: 692 VRRAVPLAIALCSMSNPALNVIDVLNKYSHDLDEEVAHNAIFSMGLVGAGTNNARLATML 751
VRRA ++ P V++ S + V + A ++G+ AGT N +L
Sbjct: 614 VRRAAVESLGFILFRTPE-QCPSVVSLLSESYNPHVRYGAAMALGVCCAGTGNKEAINLL 672
Query: 752 RQL 754
+
Sbjct: 673 EPM 675
Score = 44 (20.5 bits), Expect = 9.2e-05, Sum P(4) = 9.2e-05
Identities = 9/45 (20%), Positives = 23/45 (51%)
Query: 285 LPDEMPDKNDLQIIMTNSHINDHFHSLARELDIMEPKTPEEVYKT 329
L +E P + + N+ +ND + ++ +D +E +E +++
Sbjct: 12 LDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRS 56
Score = 37 (18.1 bits), Expect = 9.2e-05, Sum P(4) = 9.2e-05
Identities = 12/37 (32%), Positives = 16/37 (43%)
Query: 877 PVLLAVGERAELATDDYVPLTPVMEGFVILRKKDKDD 913
P L V E T Y P P+ G +I+ K +D
Sbjct: 886 PAQLKVLSMTE--TCRYQPFKPLSIGGIIILKDTSED 920
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 913 833 0.00080 122 3 11 22 0.39 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 50
No. of states in DFA: 622 (66 KB)
Total size of DFA: 406 KB (2197 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:03
No. of threads or processors used: 24
Search cpu time: 71.59u 0.10s 71.69t Elapsed: 00:00:32
Total cpu time: 71.62u 0.10s 71.72t Elapsed: 00:00:35
Start: Thu Aug 15 12:25:39 2013 End: Thu Aug 15 12:26:14 2013