BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy6266
(218 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3II0|A Chain A, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|B Chain B, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|C Chain C, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
pdb|3II0|D Chain D, Crystal Structure Of Human Glutamate Oxaloacetate
Transaminase 1 (Got1)
Length = 422
Score = 200 bits (508), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 134/210 (63%), Gaps = 16/210 (7%)
Query: 16 AYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLRE 75
AYRT++C PWVLPVV++ E+++A D+SLNHEYLP+LGL F S A+R+ LG D SP L+E
Sbjct: 28 AYRTDDCHPWVLPVVKKVEQKIANDNSLNHEYLPILGLAEFRSCASRLALGDD-SPALKE 86
Query: 76 GRAFGVQTLSGTGALRVGAEFLHRILNYTT-----FYYSKPTWENHRLVFLNAGFTEARE 130
R GVQ+L GTGALR+GA+FL R N T Y S PTWENH VF AGF + R
Sbjct: 87 KRVGGVQSLGGTGALRIGADFLARWYNGTNNKNTPVYVSSPTWENHNAVFSAAGFKDIRS 146
Query: 131 YRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA--------QQVAHMVDKHHV 182
YRYW+ EKR +D G DL NAP+ S+++LHACAHNPT +Q+A ++ H
Sbjct: 147 YRYWDAEKRGLDLQGFLNDLENAPEFSIVVLHACAHNPTGIDPTPEQWKQIASVM--KHR 204
Query: 183 YLLRSGRINMCGLTTQNLDHVAQAIHDAVT 212
+L G + NL+ A AI V+
Sbjct: 205 FLFPFFDSAYQGFASGNLERDAWAIRYFVS 234
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 42/52 (80%), Gaps = 2/52 (3%)
Query: 167 NPTAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDAVTSIPSHL 218
NP +QV ++V++ H+YLL SGRIN+ GLTT+NLD+VA +IH+AVT I +L
Sbjct: 355 NP--KQVEYLVNEKHIYLLPSGRINVSGLTTKNLDYVATSIHEAVTKIAENL 404
>pdb|1AJR|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
pdb|1AJR|B Chain B, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
pdb|1AJS|B Chain B, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
Length = 412
Score = 198 bits (503), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 130/206 (63%), Gaps = 16/206 (7%)
Query: 16 AYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLRE 75
AYRT++C+PWVLPVVR+ E+ +A + SLNHEYLP+LGL F + A+R+ LG D SP L+E
Sbjct: 39 AYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDD-SPALQE 97
Query: 76 GRAFGVQTLSGTGALRVGAEFLHRILNYTT-----FYYSKPTWENHRLVFLNAGFTEARE 130
R GVQ+L GTGALR+GAEFL R N T Y S PTWENH VF AGF + R
Sbjct: 98 KRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRS 157
Query: 131 YRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA--------QQVAHMVDKHHV 182
YRYW+ EKR +D G DL NAP+ S+ +LHACAHNPT +Q+A ++ + +
Sbjct: 158 YRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFL 217
Query: 183 YLLRSGRINMCGLTTQNLDHVAQAIH 208
+ G + NL+ A AI
Sbjct: 218 FPFFDSAYQ--GFASGNLEKDAWAIR 241
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 41/48 (85%), Gaps = 2/48 (4%)
Query: 167 NPTAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDAVTSI 214
NP +QV +++++ H+YLL SGRINMCGLTT+NLD+VA +IH+AVT I
Sbjct: 366 NP--KQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSIHEAVTKI 411
>pdb|1AJS|A Chain A, Refinement And Comparison Of The Crystal Structures Of Pig
Cytosolic Aspartate Aminotransferase And Its Complex
With 2-Methylaspartate
Length = 412
Score = 198 bits (503), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 130/206 (63%), Gaps = 16/206 (7%)
Query: 16 AYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLRE 75
AYRT++C+PWVLPVVR+ E+ +A + SLNHEYLP+LGL F + A+R+ LG D SP L+E
Sbjct: 39 AYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCASRLALGDD-SPALQE 97
Query: 76 GRAFGVQTLSGTGALRVGAEFLHRILNYTT-----FYYSKPTWENHRLVFLNAGFTEARE 130
R GVQ+L GTGALR+GAEFL R N T Y S PTWENH VF AGF + R
Sbjct: 98 KRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRS 157
Query: 131 YRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA--------QQVAHMVDKHHV 182
YRYW+ EKR +D G DL NAP+ S+ +LHACAHNPT +Q+A ++ + +
Sbjct: 158 YRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFL 217
Query: 183 YLLRSGRINMCGLTTQNLDHVAQAIH 208
+ G + NL+ A AI
Sbjct: 218 FPFFDSAYQ--GFASGNLEKDAWAIR 241
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 41/48 (85%), Gaps = 2/48 (4%)
Query: 167 NPTAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDAVTSI 214
NP +QV +++++ H+YLL SGRINMCGLTT+NLD+VA +IH+AVT I
Sbjct: 366 NP--KQVEYLINQKHIYLLPSGRINMCGLTTKNLDYVATSIHEAVTKI 411
>pdb|2CST|A Chain A, Crystal Structure Of The Closed Form Of Chicken Cytosolic
Aspartate Aminotransferase At 1.9 Angstroms Resolution
pdb|2CST|B Chain B, Crystal Structure Of The Closed Form Of Chicken Cytosolic
Aspartate Aminotransferase At 1.9 Angstroms Resolution
Length = 411
Score = 187 bits (475), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 128/206 (62%), Gaps = 16/206 (7%)
Query: 16 AYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLRE 75
AYRT+E +PWVLPVVR+ E+ +A D SLNHEYLP+LGL F + A+R+ LG D SP + +
Sbjct: 38 AYRTDEGQPWVLPVVRKVEQLIAGDGSLNHEYLPILGLPEFRANASRIALGDD-SPAIAQ 96
Query: 76 GRAFGVQTLSGTGALRVGAEFLHRILN-----YTTFYYSKPTWENHRLVFLNAGFTEARE 130
R VQ L GTGALR+GAEFL R N T Y S PTWENH VF++AGF + R
Sbjct: 97 KRVGSVQGLGGTGALRIGAEFLRRWYNGNNNTATPVYVSSPTWENHNSVFMDAGFKDIRT 156
Query: 131 YRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA--------QQVAHMVDKHHV 182
YRYW+ KR +D G+ +D+ AP+ S+ ILHACAHNPT +Q+A ++ + +
Sbjct: 157 YRYWDAAKRGLDLQGLLDDMEKAPEFSIFILHACAHNPTGTDPTPDEWKQIAAVMKRRCL 216
Query: 183 YLLRSGRINMCGLTTQNLDHVAQAIH 208
+ G + +LD A A+
Sbjct: 217 FPFFDSAYQ--GFASGSLDKDAWAVR 240
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 41/48 (85%), Gaps = 2/48 (4%)
Query: 167 NPTAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDAVTSI 214
NP +QV +M+ + H+YL+ SGRINMCGLTT+NLD+VA++IH+AVT I
Sbjct: 365 NP--KQVEYMIKEKHIYLMASGRINMCGLTTKNLDYVAKSIHEAVTKI 410
>pdb|1AAT|A Chain A, Oxoglutarate-Induced Conformational Changes In Cytosolic
Aspartate Aminotransferase
pdb|1AAT|B Chain B, Oxoglutarate-Induced Conformational Changes In Cytosolic
Aspartate Aminotransferase
Length = 411
Score = 184 bits (468), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 127/206 (61%), Gaps = 16/206 (7%)
Query: 16 AYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLRE 75
AYRT+E +PWVLPVVR+ E+ +A + SLNHEYLP+LGL F + A+R+ LG D SP + +
Sbjct: 38 AYRTDEGQPWVLPVVRKVEQLIAGNGSLNHEYLPILGLPEFRANASRIALGDD-SPAIAQ 96
Query: 76 GRAFGVQTLSGTGALRVGAEFLHRILN-----YTTFYYSKPTWENHRLVFLNAGFTEARE 130
R VQ L GTGALR+GAEFL R N T Y S PTWENH VF++AGF + R
Sbjct: 97 KRVGSVQGLGGTGALRIGAEFLRRWYNGNNNTATPVYVSSPTWENHNSVFMDAGFKDIRT 156
Query: 131 YRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA--------QQVAHMVDKHHV 182
YRYW+ KR +D G+ D+ AP+ S+ ILHACAHNPT +Q+A ++ + +
Sbjct: 157 YRYWDAAKRGLDLQGLLSDMEKAPEFSIFILHACAHNPTGTDPTPDEWKQIAAVMKRRCL 216
Query: 183 YLLRSGRINMCGLTTQNLDHVAQAIH 208
+ G + NL+ A A+
Sbjct: 217 FPFFDSAYQ--GFASGNLEKDAWAVR 240
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 41/48 (85%), Gaps = 2/48 (4%)
Query: 167 NPTAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDAVTSI 214
NP +QV +M+ + H+YL+ SGRINMCGLTT+NLD+VA++IH+AVT I
Sbjct: 365 NP--KQVEYMIKEKHIYLMASGRINMCGLTTKNLDYVAKSIHEAVTKI 410
>pdb|1YAA|A Chain A, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|B Chain B, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|C Chain C, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
pdb|1YAA|D Chain D, Aspartate Aminotransferase From Saccharomyces Cerevisiae
Cytoplasm
Length = 412
Score = 150 bits (379), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/210 (39%), Positives = 115/210 (54%), Gaps = 14/210 (6%)
Query: 16 AYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLRE 75
AYR + KPWVLP V+ AEK + D S NHEYL + GL S +S A +++ G S L+E
Sbjct: 38 AYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAAKIIFGTQ-SDALQE 96
Query: 76 GRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWN 135
R VQ+LSGTGAL + A+F + Y SKPTW NH +F N G A Y YW
Sbjct: 97 DRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTA-TYPYWA 155
Query: 136 PEKRAVDFTGMYEDLVNAPDNSVIILHACAHN-----PTAQQVAHMVD----KHHVYLLR 186
E +++D G + AP+ S+ +LH+CAHN PT++Q +VD K+H+ L
Sbjct: 156 NETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFD 215
Query: 187 SGRINMCGLTTQNLDHVAQAIHDAVTSIPS 216
+ G T +LD A A+ V + +
Sbjct: 216 TA---YQGFATGDLDKDAYAVRLGVEKLST 242
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDAV 211
T Q V + + H VYL+ SGR ++ GL N+++VA+AI + V
Sbjct: 366 TPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYVAKAIDEVV 408
>pdb|3PD6|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PD6|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PDB|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
pdb|3PDB|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
Length = 401
Score = 148 bits (373), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 113/178 (63%), Gaps = 12/178 (6%)
Query: 15 NAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLR 74
AYR + KP+VLP VR+AE ++AA + L+ EYLP+ GL F A+ + LG + + L+
Sbjct: 36 GAYRDDNGKPYVLPSVRKAEAQIAAKN-LDKEYLPIGGLAEFCKASAELALG-ENNEVLK 93
Query: 75 EGRAFGVQTLSGTGALRVGAEFLHRILNYT-TFYYSKPTWENHRLVFLNAGFTEAREYRY 133
GR VQT+SGTGALRVGA FL R ++ + KP+W NH +F +AG + + YRY
Sbjct: 94 SGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGM-QLQGYRY 152
Query: 134 WNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA--------QQVAHMVDKHHVY 183
++P+ DF+G ED+ P+ SV++LHACAHNPT +++A +V K +++
Sbjct: 153 YDPKTCGFDFSGALEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIASVVKKKNLF 210
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 164 CAHNPTAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIH 208
C +QV + + VY+ + GRI++ G+T+ N+ ++A AIH
Sbjct: 353 CFTGLKPEQVERLTKEFSVYMTKDGRISVAGVTSGNVGYLAHAIH 397
>pdb|3HLM|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3HLM|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
AminotransferaseKYNURENINE AMINOTRANSFERASE IV
pdb|3PD6|B Chain B, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PD6|D Chain D, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase, A Newly Identified Kynurenine
Aminotransferase-Iv
pdb|3PDB|A Chain A, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
pdb|3PDB|C Chain C, Crystal Structure Of Mouse Mitochondrial Aspartate
Aminotransferase In Complex With Oxaloacetic Acid
Length = 401
Score = 148 bits (373), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/178 (42%), Positives = 113/178 (63%), Gaps = 12/178 (6%)
Query: 15 NAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLR 74
AYR + KP+VLP VR+AE ++AA + L+ EYLP+ GL F A+ + LG + + L+
Sbjct: 36 GAYRDDNGKPYVLPSVRKAEAQIAAKN-LDKEYLPIGGLAEFCKASAELALG-ENNEVLK 93
Query: 75 EGRAFGVQTLSGTGALRVGAEFLHRILNYT-TFYYSKPTWENHRLVFLNAGFTEAREYRY 133
GR VQT+SGTGALRVGA FL R ++ + KP+W NH +F +AG + + YRY
Sbjct: 94 SGRFVTVQTISGTGALRVGASFLQRFFKFSRDVFLPKPSWGNHTPIFRDAGM-QLQGYRY 152
Query: 134 WNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA--------QQVAHMVDKHHVY 183
++P+ DF+G ED+ P+ SV++LHACAHNPT +++A +V K +++
Sbjct: 153 YDPKTCGFDFSGALEDISKIPEQSVLLLHACAHNPTGVDPRPEQWKEIASVVKKKNLF 210
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 164 CAHNPTAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIH 208
C +QV + + VY+ + GRI++ G+T+ N+ ++A AIH
Sbjct: 353 CFTGLKPEQVERLTKEFSVYMTKDGRISVAGVTSGNVGYLAHAIH 397
>pdb|7AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|7AAT|B Chain B, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|8AAT|A Chain A, X-ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|8AAT|B Chain B, X-ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|9AAT|A Chain A, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|9AAT|B Chain B, X-Ray Structure Refinement And Comparison Of Three Forms
Of Mitochondrial Aspartate Aminotransferase
pdb|1TAR|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAR|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAS|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAS|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAT|A Chain A, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1TAT|B Chain B, Crystalline Mitochondrial Aspartate Aminotransferase
Exists In Only Two Conformations
pdb|1OXO|A Chain A, Aspartate Aminotransferase, H-Asp Complex, Open
Conformation
pdb|1OXO|B Chain B, Aspartate Aminotransferase, H-Asp Complex, Open
Conformation
pdb|1IVR|A Chain A, Structure Of Aspartate Aminotransferase
pdb|1AMA|A Chain A, Domain Closure In Mitochondrial Aspartate Aminotransferase
pdb|1MAP|A Chain A, Crystal Structures Of True Enzymatic Reaction
Intermediates: Aspartate And Glutamate Ketimines In
Aspartate Aminotransferase
pdb|1MAQ|A Chain A, Crystal Structures Of True Enzymatic Reaction
Intermediates: Aspartate And Glutamate Ketimines In
Aspartate Aminotransferase
pdb|1OXP|A Chain A, Aspartate Aminotransferase, H-Asp Complex, Closed
Conformation
Length = 401
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 110/176 (62%), Gaps = 12/176 (6%)
Query: 16 AYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLRE 75
AYR + KP+VL VR+AE +AA ++ EYLP+ GL F+ A+ + LG + S +
Sbjct: 37 AYRDDNGKPYVLNCVRKAEAMIAAK-KMDKEYLPIAGLADFTRASAELALG-ENSEAFKS 94
Query: 76 GRAFGVQTLSGTGALRVGAEFLHRILNYT-TFYYSKPTWENHRLVFLNAGFTEAREYRYW 134
GR VQ +SGTG+LRVGA FL R ++ Y KP+W NH +F +AG + + YRY+
Sbjct: 95 GRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGL-QLQAYRYY 153
Query: 135 NPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA--------QQVAHMVDKHHV 182
+P+ ++DFTG ED+ P+ S+I+LHACAHNPT +++A +V K ++
Sbjct: 154 DPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNL 209
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 164 CAHNPTAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIH 208
C +QV + + +Y+ + GRI++ G+ + N+ ++A AIH
Sbjct: 353 CFTGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIH 397
>pdb|1AKA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate-Binding Lysine Residue
pdb|1AKC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking Its
Pyridoxal-5'-Phosphate- Binding Lysine Residue
Length = 401
Score = 142 bits (358), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/176 (42%), Positives = 110/176 (62%), Gaps = 12/176 (6%)
Query: 16 AYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLRE 75
AYR + KP+VL VR+AE +AA ++ EYLP+ GL F+ A+ + LG + S +
Sbjct: 37 AYRDDNGKPYVLNCVRKAEAMIAAK-KMDKEYLPIAGLADFTRASAELALG-ENSEAFKS 94
Query: 76 GRAFGVQTLSGTGALRVGAEFLHRILNYT-TFYYSKPTWENHRLVFLNAGFTEAREYRYW 134
GR VQ +SGTG+LRVGA FL R ++ Y KP+W NH +F +AG + + YRY+
Sbjct: 95 GRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGL-QLQAYRYY 153
Query: 135 NPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA--------QQVAHMVDKHHV 182
+P+ ++DFTG ED+ P+ S+I+LHACAHNPT +++A +V K ++
Sbjct: 154 DPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNL 209
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 164 CAHNPTAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIH 208
C +QV + + +Y+ + GRI++ G+ + N+ ++A AIH
Sbjct: 353 CFTGLKPEQVERLTKEFSIYMTKDGRISVAGVASSNVGYLAHAIH 397
>pdb|4H51|A Chain A, Crystal Structure Of A Putative Aspartate Aminotransferase
From Leishmania Major Friedlin
pdb|4H51|B Chain B, Crystal Structure Of A Putative Aspartate Aminotransferase
From Leishmania Major Friedlin
Length = 420
Score = 125 bits (315), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 104/184 (56%), Gaps = 16/184 (8%)
Query: 16 AYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLRE 75
AYR E+ +P+ L VVR+AE +L D +L++EYLP+ G + F A +++ G +
Sbjct: 53 AYRDEQGRPYPLRVVRKAE-QLLLDMNLDYEYLPISGYQPFIDEAVKIIYGN----TVEL 107
Query: 76 GRAFGVQTLSGTGALRVGAEFLHRILNYTT--FYYSKPTWENHRLVFLNAGFTEAREYRY 133
VQTLSGTGA+ +GA+ L R+ + T Y S PTW NH V AG+ Y Y
Sbjct: 108 ENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAY 167
Query: 134 WNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA---------QQVAHMVDKHHVYL 184
++P+ +++F GM +D++ APD SV ILH CAHNPT + + M+ KHH
Sbjct: 168 YDPKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVF 227
Query: 185 LRSG 188
S
Sbjct: 228 FDSA 231
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 180 HHVYLLRSGRINMCGLTTQNLDHVAQAIHDAVTSI 214
H++++ SGR NM GLT + +AQ I+DAV ++
Sbjct: 383 HNIFITVSGRANMAGLTHETALMLAQTINDAVRNV 417
>pdb|3MEB|A Chain A, Structure Of Cytoplasmic Aspartate Aminotransferase From
Giardia Lamblia
pdb|3MEB|B Chain B, Structure Of Cytoplasmic Aspartate Aminotransferase From
Giardia Lamblia
Length = 448
Score = 119 bits (297), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 91/161 (56%), Gaps = 6/161 (3%)
Query: 15 NAYRTEECKPWVLPVVRQAEKELAADDS-LNHEYLPVLGLESFSSAATRMLLGGDASPPL 73
AYR E KPW+LP V++AE +++D S N EY PV G F AA ++ G D S
Sbjct: 57 GAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLMFGKD-SKAA 115
Query: 74 REGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVF---LNAGFTEARE 130
+EGR Q+LSGTG+L +G EFLH + FY TW NH ++ N +E
Sbjct: 116 QEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKE 175
Query: 131 YRYWNPE-KRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
Y Y + + +DF+ +D+ +AP+ S+ + HACAHNP+
Sbjct: 176 YTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSG 216
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 37/48 (77%), Gaps = 1/48 (2%)
Query: 169 TAQQVAHMVDKHHVYLLRSG-RINMCGLTTQNLDHVAQAIHDAVTSIP 215
T + V ++ +K +YL+++G R++MCGLT N D+VA+AIHDAVT +P
Sbjct: 398 TPEHVDYLKEKWSIYLVKAGGRMSMCGLTESNCDYVAEAIHDAVTKLP 445
>pdb|4F4E|A Chain A, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei Covalently Bound To
Pyridoxal Phosphate
pdb|4F4E|B Chain B, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei Covalently Bound To
Pyridoxal Phosphate
Length = 420
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y E+ K +L VR AEK + L YLP+ G+ ++ ++ ++LLG D SP + G
Sbjct: 59 YTNEDGKIPLLRAVRDAEKA-RVEAGLPRGYLPIDGIAAYDASVQKLLLGDD-SPLIAAG 116
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
R Q L GTGAL++GA+FL + S P+WENHR +F AGF E Y Y++
Sbjct: 117 RVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGF-EVVAYPYYDA 175
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
+ V+F GM L ++++LHAC HNPT
Sbjct: 176 KTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTG 209
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T+ QV + ++ +Y + +GRI + L T+NLD VA AI
Sbjct: 377 TSAQVDRLREEFGIYAVSTGRICVAALNTRNLDVVANAI 415
>pdb|4EFF|A Chain A, Crystal Structure Of Aromatic-Amino-Acid Aminotransferase
From Burkholderia Pseudomallei
Length = 420
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 86/154 (55%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y E+ K +L VR AEK + L YLP+ G+ ++ ++ ++LLG D SP + G
Sbjct: 59 YTNEDGKIPLLRAVRDAEKA-RVEAGLPRGYLPIDGIAAYDASVQKLLLGDD-SPLIAAG 116
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
R Q L GTGAL++GA+FL + S P+WENHR +F AGF E Y Y++
Sbjct: 117 RVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGF-EVVAYPYYDA 175
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
+ V+F GM L ++++LHAC HNPT
Sbjct: 176 KTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTG 209
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T+ QV + ++ +Y + +GRI + L T+NLD VA AI
Sbjct: 377 TSAQVDRLREEFGIYAVSTGRICVAALNTRNLDVVANAI 415
>pdb|4EU1|A Chain A, Structure Of A Mitochondrial Aspartate Aminotransferase
From Trypanosoma Brucei
pdb|4EU1|B Chain B, Structure Of A Mitochondrial Aspartate Aminotransferase
From Trypanosoma Brucei
Length = 409
Score = 110 bits (275), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 62/160 (38%), Positives = 86/160 (53%), Gaps = 9/160 (5%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
YR + +P+VL V+QA N +Y PV G+ SF A ++ G + LR+G
Sbjct: 51 YRDDADQPFVLECVKQATL------GTNMDYAPVTGIASFVEEAQKLCFGPTCAA-LRDG 103
Query: 77 RAFGVQTLSGTGALRVGAEFLHR-ILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWN 135
R QTL GTGALR+G + L+R + N Y + NH +F AG E Y Y++
Sbjct: 104 RIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGM-ELTPYSYYD 162
Query: 136 PEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQQVAH 175
P + ++ GM E L AP+ SVI++HACAHNPT H
Sbjct: 163 PATKGLNLAGMLECLDKAPEGSVILVHACAHNPTGVDPTH 202
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 29/41 (70%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHD 209
T +QV + ++H+Y+ +GR + GL + N+++V+QAIH+
Sbjct: 366 TREQVELLRSEYHIYMTLNGRAAVSGLNSTNVEYVSQAIHN 406
>pdb|3TAT|A Chain A, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|B Chain B, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|C Chain C, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|D Chain D, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|E Chain E, Tyrosine Aminotransferase From E. Coli
pdb|3TAT|F Chain F, Tyrosine Aminotransferase From E. Coli
Length = 397
Score = 101 bits (252), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 56/149 (37%), Positives = 78/149 (52%), Gaps = 2/149 (1%)
Query: 27 LPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSG 86
L V +AE L A YLP+ GL + A +L G D P L++ R +QTL G
Sbjct: 46 LQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGAD-HPVLKQQRVATIQTLGG 104
Query: 87 TGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGM 146
+GAL+VGA+FL R + + S PTWENH +F AGF E Y +++ V F +
Sbjct: 105 SGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGF-EVSTYPWYDEATNGVRFNDL 163
Query: 147 YEDLVNAPDNSVIILHACAHNPTAQQVAH 175
L P S+++LH C HNPT + +
Sbjct: 164 LATLKTLPARSIVLLHPCCHNPTGADLTN 192
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
+A QV + ++ VYL+ SGR+ + GL T N+ VA+A
Sbjct: 355 SAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKAF 393
>pdb|4F5F|A Chain A, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1.
pdb|4F5F|B Chain B, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1
Length = 406
Score = 101 bits (251), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ YL + GL F T+ LL G S + +
Sbjct: 46 YKDETGKTPVLTSVKKAEQYLLENET-TKTYLGLDGLPEFGRC-TQELLFGKGSALINDK 103
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT G+GALRVGA+FL + + + S P+W NH+ +F +AG E REY Y++
Sbjct: 104 RARTAQTPGGSGALRVGADFLAKNTSVKRVWVSNPSWPNHKAIFNSAGL-EVREYAYYDA 162
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 163 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 196
Score = 34.3 bits (77), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGRIN+ G+T N+ + +AI
Sbjct: 364 TKEQVLRLREEFGVYAVASGRINVAGMTPDNMAPLCEAI 402
>pdb|3ZZJ|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|3ZZK|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
pdb|4A00|A Chain A, Structure Of An Engineered Aspartate Aminotransferase
Length = 396
Score = 100 bits (250), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 85/157 (54%), Gaps = 3/157 (1%)
Query: 14 RNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPL 73
+ Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S +
Sbjct: 33 QGVYKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALI 90
Query: 74 REGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRY 133
+ RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y
Sbjct: 91 NDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAY 149
Query: 134 WNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
++ E +DF + L A V++ H C HNPT
Sbjct: 150 YDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|1ARH|A Chain A, Aspartate Aminotransferase, Y225rR386A MUTANT
pdb|1ARH|B Chain B, Aspartate Aminotransferase, Y225rR386A MUTANT
Length = 396
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SG +N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGAVNVAGMTPDNMAPLCEAI 392
>pdb|1ASB|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASC|A Chain A, The Structural Basis For The Reduced Activity Of The
D223a(D222a) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1SPA|A Chain A, Role Of Asp222 In The Catalytic Mechanism Of Escherichia
Coli Aspartate Aminotransferase: The Amino Acid Residue
Which Enhances The Function Of The Enzyme-Bound Coenzyme
Pyridoxal 5'-Phosphate
Length = 396
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 33.5 bits (75), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|1AIA|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIA|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIB|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|A Chain A, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
pdb|1AIC|B Chain B, Structural Basis For The Catalytic Activity Of Aspartate
Aminotransferase K258h Lacking The
Pyridoxal-5'-Phosphate Binding Lysine Residue
Length = 396
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 33.5 bits (75), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|4F5M|A Chain A, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm.
pdb|4F5M|B Chain B, Wild-type E. Coli Aspartate Aminotransferase: A Template
For The Interconversion Of Substrate Specificity And
Activity To Tyrosine Aminotransferase By The Janus
Algorithm
Length = 406
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 46 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 103
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 104 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 162
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 163 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 196
Score = 33.5 bits (75), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 364 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 402
>pdb|1ASF|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASG|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
Length = 396
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 33.5 bits (75), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|3AAT|A Chain A, Activity And Structure Of The Active-Site Mutants R386y
And R386f Of Escherichia Coli Aspartate Aminotransferase
Length = 396
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SG +N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGFVNVAGMTPDNMAPLCEAI 392
>pdb|1ASL|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASL|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASM|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ASN|B Chain B, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase In Two Conformations: Comparison Of An
Unliganded Open And Two Liganded Closed Forms
pdb|1ARG|A Chain A, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1ARG|B Chain B, Aspartate Aminotransferase, Phospho-5'-Pyridoxyl Aspartate
Complex
pdb|1C9C|A Chain A, Aspartate Aminotransferase Complexed With
C3-Pyridoxal-5'-Phosphate
pdb|1CQ6|A Chain A, Aspartate Aminotransferase Complex With
C4-Pyridoxal-5p-Phosphate
pdb|1CQ7|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C5-Pyridoxal- 5p-Phosphate
pdb|1CQ8|A Chain A, Aspartate Aminotransferase (E.C. 2.6.1.1) Complexed With
C6-Pyridoxal- 5p-Phosphate
pdb|1X28|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X28|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-L-Glutamic Acid
pdb|1X29|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X29|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-2-Methyl-L-Glutamic Acid
pdb|1X2A|A Chain A, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1X2A|B Chain B, Crystal Structure Of E.Coli Aspat Complexed With N-
Phosphopyridoxyl-D-Glutamic Acid
pdb|1AAW|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
pdb|1AMQ|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMR|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1AMS|A Chain A, X-Ray Crystallographic Study Of Pyridoxamine
5'-Phosphate-Type Aspartate Aminotransferases From
Escherichia Coli In Three Forms
pdb|1ARS|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ART|A Chain A, X-ray Crystallographic Study Of Pyridoxal
5'-phosphate-type Aspartate Aminotransferases From
Escherichia Coli In Open And Closed Form
pdb|1ASA|A Chain A, The Structural Basis For The Reduced Activity Of The
Y226f(Y225f) Active Site Mutant Of E. Coli Aspartate
Aminotransferase
pdb|1ASD|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With N-Meplp
pdb|1ASE|A Chain A, The Structure Of Wild Type E. Coli Aspartate
Aminotransferase Reconstituted With Plp-N-Oxide
pdb|3PA9|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 7.5
pdb|3PAA|A Chain A, Mechanism Of Inactivation Of E. Coli Aspartate
Aminotransferase By
(S)-4-Amino-4,5-Dihydro-2-Furancarboxylic Acid (S-Adfa)
Ph 8.0
pdb|3QPG|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|2Q7W|A Chain A, Structural Studies Reveals The Inactivation Of E. Coli
L-Aspartate Aminotransferase
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms At Ph 6.0
pdb|2QBT|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph 8.0)
pdb|2QA3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Amino-Dihydro-2-Thiophenecarboxylic Acid (Sadta)
Via Two Mechanisms (At Ph6.5)
pdb|2QB2|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-Aspartate Aminotransferase By
(S)-4,5-Dihydro-2thiophenecarboylic Acid (Sadta) Via Two
Mechanisms (At Ph 7.0).
pdb|2QB3|A Chain A, Structural Studies Reveal The Inactivation Of E. Coli
L-aspartate Aminotransferase By
(s)-4,5-dihydro-2-thiophenecarboxylic Acid (sadta) Via
Two Mechanisms (at Ph 7.5)
pdb|3QN6|A Chain A, Crystal Structures Of Escherichia Coli Aspartate
Aminotransferase Reconstituted With 1-Deaza-Pyridoxal
5'-Phosphate: Internal Aldimine And Stable L-Aspartate
External Aldimine
Length = 396
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|2AAT|A Chain A, 2.8-Angstroms-Resolution Crystal Structure Of An
Active-Site Mutant Of Aspartate Aminotransferase From
Escherichia Coli
pdb|4DBC|A Chain A, Substrate Activation In Aspartate Aminotransferase
Length = 396
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|1AAM|A Chain A, The Structural Basis For The Altered Substrate Specificity
Of The R292d Active Site Mutant Of Aspartate
Aminotransferase From E. Coli
Length = 396
Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|1IX6|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f
pdb|1IX7|A Chain A, Aspartate Aminotransferase Active Site Mutant V39f Maleate
Complex
Length = 396
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 33.5 bits (75), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|2D5Y|A Chain A, Aspartate Aminotransferase Mutant Mc With Isovaleric Acid
Length = 396
Score = 100 bits (248), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T NL + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRLNVAGMTPDNLAPLCEAI 392
>pdb|4F5I|A Chain A, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4.
pdb|4F5I|B Chain B, Substrate Specificity Conversion Of E. Coli
Pyridoxal-5'-phosphate Dependent Aspartate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P4
Length = 406
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K V+ V++AE+ L +++ YL + G+ F T+ LL G S + +
Sbjct: 46 YKDETGKTPVMTSVKKAEQYLLENET-TKTYLGIDGIPEFGRC-TQELLFGKGSALINDK 103
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT G+GALRV A+FL + + + S PTW NH+ +F +AG E REY Y++
Sbjct: 104 RARTAQTPGGSGALRVAADFLAKNTSVKRVWVSNPTWPNHKAIFNSAGL-EVREYAYYDA 162
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 163 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 196
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGRIN+ G+T N+ + +AI
Sbjct: 364 TKEQVLRLREEFGVYAVASGRINVAGMTPDNMAPLCEAI 402
>pdb|4F5K|A Chain A, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6.
pdb|4F5K|B Chain B, Substrate Specificity Conversion Of Aspartate
Aminotransferase To Tyrosine Aminotransferase By The
Janus Algorithm: Chimera P6
Length = 406
Score = 99.8 bits (247), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K V+ V++AE+ L +++ YL + GL F T+ LL G S + +
Sbjct: 46 YKDETGKTPVMTSVKKAEQYLLENET-TKTYLGLDGLPEFGRC-TQELLFGKGSALINDK 103
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT G+GALRV A+FL + + + S PTW NH+ +F +AG E REY Y++
Sbjct: 104 RARTAQTPGGSGALRVAADFLAKNTSVKRVWVSNPTWPNHKAIFNSAGL-EVREYAYYDA 162
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 163 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 196
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGRIN+ G+T N+ + +AI
Sbjct: 364 TKEQVLRLREEFGVYAVASGRINVAGMTPDNMAPLCEAI 402
>pdb|2D61|A Chain A, Aspartate Aminotransferase Mutant Ma With Maleic Acid
pdb|2D63|A Chain A, Aspartate Aminotransferase Mutant Ma With Isovaleric Acid
pdb|2D7Y|A Chain A, Aspartate Aminotransferase Mutant Ma
Length = 396
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YNDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 33.5 bits (75), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|1TOG|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
pdb|1TOG|B Chain B, Hydrocinnamic Acid-Bound Structure Of Srhept + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT G+GALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 33.5 bits (75), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|1TOJ|A Chain A, Hydrocinnamic Acid-Bound Structure Of Srhept Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOK|A Chain A, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
pdb|1TOK|B Chain B, Maleic Acid-bound Structure Of Srhept Mutant Of E. Coli
Aspartate Aminotransferase
Length = 396
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 84/154 (54%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT G+GALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|4F5G|A Chain A, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P2.
pdb|4F5G|B Chain B, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P2
Length = 406
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ YL + GL F T+ LL G S + +
Sbjct: 46 YKDETGKTPVLTSVKKAEQYLLENET-TKTYLGLDGLPEFGRC-TQELLFGKGSALINDK 103
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT G+GALRV A+FL + + + S P+W NH+ +F +AG E REY Y++
Sbjct: 104 RARTAQTPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKAIFNSAGL-EVREYAYYDA 162
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 163 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 196
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 364 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 402
>pdb|4F5J|A Chain A, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P5.
pdb|4F5J|B Chain B, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P5
Length = 406
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ YL + GL F T+ LL G S + +
Sbjct: 46 YKDETGKTPVLTSVKKAEQYLLENET-TKTYLGLDGLPEFGRC-TQELLFGKGSALINDK 103
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT G+GALRV A+FL + + + S P+W NH+ +F +AG E REY Y++
Sbjct: 104 RARTAQTPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKAIFNSAGL-EVREYAYYDA 162
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 163 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 196
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 364 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 402
>pdb|1CZC|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
GLUTARIC ACID
pdb|1CZE|A Chain A, Aspartate Aminotransferase Mutant Atb17139S142N WITH
SUCCINIC ACID
Length = 396
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YNDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVRRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 33.9 bits (76), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T NL + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRLNVAGMTPDNLAPLCEAI 392
>pdb|3FSL|A Chain A, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|B Chain B, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|C Chain C, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|D Chain D, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|E Chain E, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
pdb|3FSL|F Chain F, Crystal Structure Of Tyrosine Aminotransferase Tripple
Mutant (P181q, R183g,A321k) From Escherichia Coli At
2.35 A Resolution
Length = 397
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 77/149 (51%), Gaps = 2/149 (1%)
Query: 27 LPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSG 86
L V +AE L A YLP+ GL + A +L G D P L++ R +QTL G
Sbjct: 46 LQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIAPLLFGAD-HPVLKQQRVATIQTLGG 104
Query: 87 TGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGM 146
+GAL+VGA+FL R + + S PTWENH +F AGF E Y +++ V F +
Sbjct: 105 SGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGF-EVSTYPWYDEATNGVRFNDL 163
Query: 147 YEDLVNAPDNSVIILHACAHNPTAQQVAH 175
L S+++LH C HNPT + +
Sbjct: 164 LATLKTLQAGSIVLLHPCCHNPTGADLTN 192
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
+A QV + ++ VYL+ SGR+ + GL T N+ VA+A
Sbjct: 355 SAAQVDRLREEFGVYLIASGRMCVAGLNTANVQRVAKAF 393
>pdb|4F5H|A Chain A, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3.
pdb|4F5H|B Chain B, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3
Length = 406
Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K V+ V++AE+ L +++ YL + GL F T+ LL G S + +
Sbjct: 46 YKDETGKTPVMTSVKKAEQYLLENET-TKTYLGLDGLPEFGRC-TQELLFGKGSALINDK 103
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT G+GALRV A+FL + + + S P+W NH+ +F +AG E REY Y++
Sbjct: 104 RARTAQTPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKAIFNSAGL-EVREYAYYDA 162
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 163 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 196
Score = 33.5 bits (75), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 364 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 402
>pdb|1G4V|A Chain A, Aspartate Aminotransferase Active Site Mutant N194a/y225f
Length = 396
Score = 97.8 bits (242), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C H PT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHAPTG 186
Score = 33.5 bits (75), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|1G7W|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR386L
Length = 396
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C H PT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHAPTG 186
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SG +N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGLVNVAGMTPDNMAPLCEAI 392
>pdb|1G4X|A Chain A, Aspartate Aminotransferase Active Site Mutant N194aR292L
Length = 396
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C H PT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHAPTG 186
Score = 33.5 bits (75), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|1G7X|A Chain A, Aspartate Aminotransferase Active Site Mutant
N194aR292LR386L
Length = 396
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C H PT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHAPTG 186
Score = 30.4 bits (67), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SG +N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGLVNVAGMTPDNMAPLCEAI 392
>pdb|1IX8|A Chain A, Aspartate Aminotransferase Active Site Mutant V39fN194A
Length = 396
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C H PT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHAPTG 186
Score = 33.5 bits (75), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|1BQA|A Chain A, Aspartate Aminotransferase P195a Mutant
pdb|1BQA|B Chain B, Aspartate Aminotransferase P195a Mutant
Length = 396
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HN T
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNATG 186
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|1B4X|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation,
With Bound Maleate
pdb|5EAA|A Chain A, Aspartate Aminotransferase From E. Coli, C191s Mutation
Length = 396
Score = 96.7 bits (239), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGSCHNPTG 186
Score = 33.5 bits (75), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|1QIS|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191f
Mutation, With Bound Maleate
Length = 396
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGFCHNPTG 186
Score = 33.5 bits (75), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|2D66|A Chain A, Aspartate Aminotransferase Mutant Mab
pdb|2D7Z|A Chain A, Aspartate Aminotransferase Mutant Mab Complexed With
Maleic Acid
Length = 396
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YNDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P W H+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPGWPTHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 33.5 bits (75), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|1QIT|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191w
Mutation, With Bound Maleate
Length = 396
Score = 95.9 bits (237), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGWCHNPTG 186
Score = 33.5 bits (75), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|1QIR|A Chain A, Aspartate Aminotransferase From Escherichia Coli, C191y
Mutation, With Bound Maleate
Length = 396
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGYCHNPTG 186
Score = 33.5 bits (75), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|2D64|A Chain A, Aspartate Aminotransferase Mutant Mabc With Isovaleric
Acid
pdb|2D65|A Chain A, Aspartate Aminotransferase Mutant Mabc
Length = 396
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YNDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P W H+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPGWPTHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T NL + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRLNVAGMTPDNLAPLCEAI 392
>pdb|1AHY|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHY|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHX|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHX|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHG|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHG|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHF|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHF|B Chain B, Aspartate Aminotransferase Hexamutant
pdb|1AHE|A Chain A, Aspartate Aminotransferase Hexamutant
pdb|1AHE|B Chain B, Aspartate Aminotransferase Hexamutant
Length = 396
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y E K VL V++AE+ L +++ YL + G+ F T+ LL G S + +
Sbjct: 36 YYDETGKIPVLTSVKKAEQYLLENET-TKLYLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT G+GALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 33.5 bits (75), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|1TOE|A Chain A, Unliganded Structure Of Hexamutant + A293d Mutant Of E.
Coli Aspartate Aminotransferase
pdb|1TOI|A Chain A, Hydrocinnamic Acid-Bound Structure Of Hexamutant + A293d
Mutant Of E. Coli Aspartate Aminotransferase
Length = 396
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y E K VL V++AE+ L +++ YL + G+ F T+ LL G S + +
Sbjct: 36 YYDETGKIPVLTSVKKAEQYLLENET-TKLYLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT G+GALRV A+FL + + + S P+W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 33.5 bits (75), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|1YOO|A Chain A, Aspartate Aminotransferase Mutant Atb17 With Isovaleric
Acid
Length = 396
Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 81/154 (52%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YNDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P W H+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVRRVWVSNPGWPTHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 33.9 bits (76), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T NL + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRLNVAGMTPDNLAPLCEAI 392
>pdb|1ARI|A Chain A, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
pdb|1ARI|B Chain B, Aspartate Aminotransferase, W140h Mutant, Maleate Complex
Length = 396
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S P+ NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSHPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTG 186
Score = 33.5 bits (75), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|1BQD|A Chain A, Aspartate Aminotransferase P138aP195A DOUBLE MUTANT
pdb|1BQD|B Chain B, Aspartate Aminotransferase P138aP195A DOUBLE MUTANT
Length = 396
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 82/154 (53%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y+ E K VL V++AE+ L +++ + YL + G+ F T+ LL G S + +
Sbjct: 36 YKDETGKTPVLTSVKKAEQYLLENETTKN-YLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT GTGALRV A+FL + + + S +W NH+ VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNASWPNHKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ H C HN T
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFHGCCHNATG 186
Score = 33.5 bits (75), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ VY + SGR+N+ G+T N+ + +AI
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGMTPDNMAPLCEAI 392
>pdb|3UAK|A Chain A, Crystal Structure Of De Novo Designed Cysteine Esterase
Ech14, Northeast Structural Genomics Consortium Target
Or54
pdb|3UAK|B Chain B, Crystal Structure Of De Novo Designed Cysteine Esterase
Ech14, Northeast Structural Genomics Consortium Target
Or54
Length = 406
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 76/154 (49%), Gaps = 3/154 (1%)
Query: 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG 76
Y E K VL V++AE+ L +++ YL + G+ F T+ LL G S + +
Sbjct: 36 YYDETGKIPVLTSVKKAEQYLLENET-TKLYLGIDGIPEFGRC-TQELLFGKGSALINDK 93
Query: 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP 136
RA QT G GALRV A+FL + + + P+ + VF +AG E REY Y++
Sbjct: 94 RARTAQTPGGHGALRVAADFLAKNTSVKRVWVYNPSSNCSKSVFNSAGL-EVREYAYYDA 152
Query: 137 EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTA 170
E +DF + L A V++ C HNPT
Sbjct: 153 ENHTLDFDALINSLNEAQAGDVVLFTGCCHNPTG 186
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDAVTSI 214
T +QV + ++ VY + SGR+N+ G T N + +AI + S+
Sbjct: 354 TKEQVLRLREEFGVYAVASGRVNVAGXTPDNXAPLCEAIVAVLGSL 399
>pdb|1AY4|A Chain A, Aromatic Amino Acid Aminotransferase Without Substrate
pdb|1AY4|B Chain B, Aromatic Amino Acid Aminotransferase Without Substrate
pdb|1AY5|A Chain A, Aromatic Amino Acid Aminotransferase Complex With Maleate
pdb|1AY5|B Chain B, Aromatic Amino Acid Aminotransferase Complex With Maleate
pdb|1AY8|A Chain A, Aromatic Amino Acid Aminotransferase Complex With
3-Phenylpropionate
pdb|1AY8|B Chain B, Aromatic Amino Acid Aminotransferase Complex With
3-Phenylpropionate
pdb|2AY1|A Chain A, Aromatic Amino Acid Aminotransferase With
4-aminohydrocinnamic Acid
pdb|2AY1|B Chain B, Aromatic Amino Acid Aminotransferase With
4-aminohydrocinnamic Acid
pdb|2AY2|A Chain A, Aromatic Amino Acid Aminotransferase With Cyclohexane
Propionic Acid
pdb|2AY2|B Chain B, Aromatic Amino Acid Aminotransferase With Cyclohexane
Propionic Acid
pdb|2AY3|A Chain A, Aromatic Amino Acid Aminotransferase With
3-(3,4-Dimethoxyphenyl) Propionic Acid
pdb|2AY3|B Chain B, Aromatic Amino Acid Aminotransferase With
3-(3,4-Dimethoxyphenyl) Propionic Acid
pdb|2AY4|A Chain A, Aromatic Amino Acid Aminotransferase With
3-(P-Tolyl)propionic Acid
pdb|2AY4|B Chain B, Aromatic Amino Acid Aminotransferase With
3-(P-Tolyl)propionic Acid
pdb|2AY5|A Chain A, Aromatic Amino Acid Aminotransferase With
3-indolepropionic Acid
pdb|2AY5|B Chain B, Aromatic Amino Acid Aminotransferase With
3-indolepropionic Acid
pdb|2AY6|A Chain A, Aromatic Amino Acid Aminotransferase With 3-Indolebutyric
Acid
pdb|2AY6|B Chain B, Aromatic Amino Acid Aminotransferase With 3-Indolebutyric
Acid
pdb|2AY7|A Chain A, Aromatic Amino Acid Aminotransferase With 4-Phenylbutyric
Acid
pdb|2AY7|B Chain B, Aromatic Amino Acid Aminotransferase With 4-Phenylbutyric
Acid
pdb|2AY8|A Chain A, Aromatic Amino Acid Aminotransferase With
4-(2-Thienyl)butyric Acid
pdb|2AY8|B Chain B, Aromatic Amino Acid Aminotransferase With
4-(2-Thienyl)butyric Acid
pdb|2AY9|A Chain A, Aromatic Amino Acid Aminotransferase With 5-Phenylvaleric
Acid
pdb|2AY9|B Chain B, Aromatic Amino Acid Aminotransferase With 5-Phenylvaleric
Acid
Length = 394
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 70/146 (47%), Gaps = 8/146 (5%)
Query: 26 VLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLS 85
++ V AE+ + ++ Y + G F A ++LG L+ + T+
Sbjct: 45 IMRAVHAAEQRMLETET-TKTYAGLSGEPEFQKAMGELILGDG----LKSETTATLATVG 99
Query: 86 GTGALRVGAEFLHRILNYTT-FYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFT 144
GTGALR E L R+ N + S PTW NH + +N + YRY++ E R VDF
Sbjct: 100 GTGALRQALE-LARMANPDLRVFVSDPTWPNH-VSIMNFMGLPVQTYRYFDAETRGVDFE 157
Query: 145 GMYEDLVNAPDNSVIILHACAHNPTA 170
GM DL A +++LH C HNPT
Sbjct: 158 GMKADLAAAKKGDMVLLHGCCHNPTG 183
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 169 TAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAI 207
T +QV + ++ +Y++ RIN+ GL + +A+AI
Sbjct: 351 TPEQVKRIKEEFGIYMVGDSRINIAGLNDNTIPILARAI 389
>pdb|3K7Y|A Chain A, Aspartate Aminotransferase Of Plasmodium Falciparum
Length = 405
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 4/148 (2%)
Query: 26 VLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLS 85
+ V A+K L ++ YL G E FS+ T+ L+ G+ S + + + +Q +
Sbjct: 48 IFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTL-TQNLIFGNNSKYIEDKKICTIQCIG 105
Query: 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTG 145
GTGA+ V EFL ++LN T Y + P + NH + + GF + +++ +++
Sbjct: 106 GTGAIFVLLEFL-KMLNVETLYVTNPPYINHVNMIESRGFN-LKYINFFDYNLIDINYDL 163
Query: 146 MYEDLVNAPDNSVIILHACAHNPTAQQV 173
DL N P+ S +IL +NP + +
Sbjct: 164 FLNDLRNIPNGSSVILQISCYNPCSVNI 191
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 23/103 (22%)
Query: 115 NHRLVFLNAGFTEAREYRY---WNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ 171
N+R++F N T ++Y WN K+ G++ + P
Sbjct: 323 NNRILFFNKLETYQKKYNLNYDWNVYKKQ---RGLF-----------------SFVPLLA 362
Query: 172 QVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDAVTSI 214
++A + HH+Y++ +GRIN+ G+T N+D++A I +++ I
Sbjct: 363 KIAEHLKTHHIYIINNGRINVSGITKNNVDYIADKICLSLSQI 405
>pdb|3LID|A Chain A, Crystal Structure Of The Extracellular Domain Of The
Putative Histidine Kinase Vphk1s-Z8
pdb|3LID|B Chain B, Crystal Structure Of The Extracellular Domain Of The
Putative Histidine Kinase Vphk1s-Z8
pdb|3LIE|A Chain A, Crystal Structure Of The Extracellular Domain Of The
Putative Histidine Kinase Vphk1s-Z8
pdb|3LIE|B Chain B, Crystal Structure Of The Extracellular Domain Of The
Putative Histidine Kinase Vphk1s-Z8
Length = 295
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 62/155 (40%), Gaps = 15/155 (9%)
Query: 2 YMSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAAT 61
++ + I+ ++T P ++ + A + SL++E + G+E
Sbjct: 84 FLDTSGTEKVRIKYDFKTSIAGPSLILRDKSAREYFKYAQSLDNEQISAWGIELERDKGE 143
Query: 62 RMLLGGDASPPLREGRAFGVQTL-SGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVF 120
L SP LR V + G L V E+L +LNY+ P + H +
Sbjct: 144 ---LVYPLSPSLRILMPISVNDVRQGYLVLNVDIEYLSSLLNYS------PVRDFHIELV 194
Query: 121 LNAGF-----TEAREYRYWNPEKRAVDFTGMYEDL 150
+ GF E+R Y PE+ +F+ MY D+
Sbjct: 195 KHKGFYIASPDESRLYGDIIPERSQFNFSNMYPDI 229
>pdb|1YCK|A Chain A, Crystal Structure Of Human Peptidoglycan Recognition
Protein (Pgrp-S)
Length = 175
Score = 30.0 bits (66), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 44/128 (34%), Gaps = 16/128 (12%)
Query: 28 PVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGT 87
P+V + E + A + H LP+ + +A + R + + ++TL
Sbjct: 11 PIVPRNEWKALASECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTL--- 67
Query: 88 GALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMY 147
G VG FL + Y W FT A WNP + F G Y
Sbjct: 68 GWCDVGYNFL---IGEDGLVYEGRGWN----------FTGAHSGHLWNPMSIGISFMGNY 114
Query: 148 EDLVNAPD 155
D V P
Sbjct: 115 MDRVPTPQ 122
>pdb|3MSW|A Chain A, Crystal Structure Of A Protein With Unknown Function
(Bf3112 Bacteroides Fragilis Nctc 9343 At 1.90 A
Resolution
Length = 145
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 2/64 (3%)
Query: 110 KPTWENHRLVFLNAGFTEAR-EYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNP 168
K TWE ++ TE EY WN EK + D + Y + +N +I +A N
Sbjct: 63 KNTWETESRTVISRYETETSVEYSVWNKEKGSFDLSKKY-IYITDNNNQLIAQYAYKXNS 121
Query: 169 TAQQ 172
Q
Sbjct: 122 RTNQ 125
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 12/54 (22%)
Query: 141 VDFTGMYEDLVNAPDNSVIILHAC-AHNP--------TAQQVAHMVDKHHVYLL 185
+DF + D+V +N V + C HNP +Q+ H+ KHHV L+
Sbjct: 151 IDFEQLENDIV---ENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILV 201
>pdb|1FBN|A Chain A, Crystal Structure Of A Fibrillarin Homologue From
Methanococcus Jannaschii, A Hyperthermophile, At 1.6 A
Length = 230
Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 130 EYRYWNPEKRAVDFTGMYEDLVNAP---DNSVIILHACAHNPTAQQVAHMVDKHHVYLL 185
EYR WNP K + + + L P D+ ++ L A A T VA + DK VY +
Sbjct: 48 EYRIWNPNKSKL-AAAIIKGLKVXPIKRDSKILYLGASAGT-TPSHVADIADKGIVYAI 104
>pdb|1G8S|A Chain A, Methanococcus Jannaschii Fibrillarin Pre-Rrna Processing
Protein
Length = 230
Score = 26.9 bits (58), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Query: 130 EYRYWNPEKRAVDFTGMYEDLVNAP---DNSVIILHACAHNPTAQQVAHMVDKHHVYLL 185
EYR WNP K + + + L P D+ ++ L A A T VA + DK VY +
Sbjct: 48 EYRIWNPNKSKL-AAAIIKGLKVMPIKRDSKILYLGASAGT-TPSHVADIADKGIVYAI 104
>pdb|4GOP|C Chain C, Structure And Conformational Change Of A Replication
Protein A Heterotrimer Bound To Ssdna
pdb|4GOP|Z Chain Z, Structure And Conformational Change Of A Replication
Protein A Heterotrimer Bound To Ssdna
pdb|4GNX|C Chain C, Structure Of
pdb|4GNX|Z Chain Z, Structure Of
Length = 444
Score = 26.9 bits (58), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 6/94 (6%)
Query: 121 LNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQQVAHMVDKH 180
+ A T + R+W+ ++ VN D+S I A N + ++ ++
Sbjct: 18 IKARVTSKSDIRHWSNQRGEGKLFS-----VNLLDDSGEI-KATGFNDAVDRFYPLLQEN 71
Query: 181 HVYLLRSGRINMCGLTTQNLDHVAQAIHDAVTSI 214
HVYL+ R+N+ NL + + + T I
Sbjct: 72 HVYLISKARVNIAKKQFSNLQNEYEITFENSTEI 105
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.134 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,675,868
Number of Sequences: 62578
Number of extensions: 270895
Number of successful extensions: 794
Number of sequences better than 100.0: 73
Number of HSP's better than 100.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 582
Number of HSP's gapped (non-prelim): 133
length of query: 218
length of database: 14,973,337
effective HSP length: 95
effective length of query: 123
effective length of database: 9,028,427
effective search space: 1110496521
effective search space used: 1110496521
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)