Query psy6266
Match_columns 218
No_of_seqs 211 out of 1382
Neff 8.3
Searched_HMMs 46136
Date Fri Aug 16 21:59:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6266.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/6266hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1448 TyrB Aspartate/tyrosin 100.0 1.4E-41 3E-46 289.4 18.1 201 7-213 26-234 (396)
2 KOG1412|consensus 100.0 1.2E-37 2.7E-42 258.3 14.9 202 8-212 31-240 (410)
3 KOG1411|consensus 100.0 5.4E-37 1.2E-41 257.4 13.7 200 8-212 53-260 (427)
4 COG0436 Aspartate/tyrosine/aro 100.0 8.7E-36 1.9E-40 263.2 17.0 176 7-199 28-212 (393)
5 PRK09257 aromatic amino acid a 100.0 4.1E-33 8.9E-38 246.4 19.5 187 7-198 26-220 (396)
6 PTZ00376 aspartate aminotransf 100.0 3.7E-32 8E-37 241.1 20.6 189 7-200 29-226 (404)
7 PLN02397 aspartate transaminas 100.0 1.2E-31 2.7E-36 239.1 19.7 189 6-199 47-243 (423)
8 KOG0257|consensus 100.0 1.4E-31 3.1E-36 230.1 14.3 179 8-203 31-225 (420)
9 PLN02368 alanine transaminase 100.0 5.7E-30 1.2E-34 227.3 14.0 184 5-199 36-259 (407)
10 PLN00143 tyrosine/nicotianamin 100.0 5.9E-29 1.3E-33 221.0 16.8 183 4-199 29-219 (409)
11 PRK13355 bifunctional HTH-doma 100.0 9.4E-29 2E-33 225.7 16.5 180 4-199 143-330 (517)
12 PTZ00377 alanine aminotransfer 100.0 7.6E-29 1.6E-33 224.5 15.4 185 5-198 44-266 (481)
13 PLN00145 tyrosine/nicotianamin 100.0 3.2E-28 6.9E-33 217.6 16.7 181 6-199 51-239 (430)
14 PRK07366 succinyldiaminopimela 100.0 4.5E-28 9.8E-33 213.6 17.1 179 4-199 27-214 (388)
15 PRK06855 aminotransferase; Val 100.0 3.6E-28 7.8E-33 217.5 16.3 182 4-199 29-220 (433)
16 PLN02187 rooty/superroot1 100.0 1.1E-27 2.3E-32 216.0 17.1 180 5-199 64-253 (462)
17 PLN02656 tyrosine transaminase 100.0 2.4E-27 5.2E-32 210.6 17.1 183 4-199 28-218 (409)
18 PLN00175 aminotransferase fami 100.0 3.6E-27 7.9E-32 209.8 16.9 176 5-199 52-236 (413)
19 PRK09147 succinyldiaminopimela 100.0 3.4E-27 7.3E-32 208.6 16.5 176 5-199 27-215 (396)
20 PRK08636 aspartate aminotransf 99.9 7.7E-27 1.7E-31 206.9 16.9 181 5-199 31-224 (403)
21 PRK08637 hypothetical protein; 99.9 1.2E-26 2.7E-31 204.7 17.6 180 7-199 3-200 (388)
22 PRK08068 transaminase; Reviewe 99.9 1.2E-26 2.6E-31 204.7 16.5 179 4-199 29-216 (389)
23 PRK07324 transaminase; Validat 99.9 4.5E-27 9.8E-32 206.6 13.5 173 2-198 21-201 (373)
24 TIGR03540 DapC_direct LL-diami 99.9 2.3E-26 4.9E-31 202.3 17.5 179 5-199 27-213 (383)
25 KOG0259|consensus 99.9 1.8E-26 4E-31 196.3 16.0 187 5-204 59-253 (447)
26 PRK05942 aspartate aminotransf 99.9 1.9E-26 4.1E-31 203.8 16.8 179 4-198 32-218 (394)
27 PRK07681 aspartate aminotransf 99.9 2E-26 4.3E-31 204.0 16.7 177 5-199 30-215 (399)
28 PTZ00433 tyrosine aminotransfe 99.9 2.4E-26 5.2E-31 204.4 17.2 183 4-199 30-226 (412)
29 TIGR03538 DapC_gpp succinyldia 99.9 4.4E-26 9.5E-31 201.3 17.0 175 5-198 26-213 (393)
30 PLN02231 alanine transaminase 99.9 2.5E-26 5.5E-31 210.0 15.9 177 8-198 130-319 (534)
31 PRK09276 LL-diaminopimelate am 99.9 4.7E-26 1E-30 200.4 16.9 178 5-198 29-214 (385)
32 PRK06290 aspartate aminotransf 99.9 4.9E-26 1.1E-30 202.4 16.8 176 6-199 43-228 (410)
33 PRK08960 hypothetical protein; 99.9 4.9E-26 1.1E-30 200.6 16.6 176 5-198 30-213 (387)
34 TIGR01264 tyr_amTase_E tyrosin 99.9 5.3E-26 1.2E-30 201.3 16.2 181 5-199 29-217 (401)
35 PRK06207 aspartate aminotransf 99.9 7.2E-26 1.6E-30 201.0 16.8 177 7-199 39-227 (405)
36 PRK06348 aspartate aminotransf 99.9 8.2E-26 1.8E-30 199.1 16.2 176 6-199 28-211 (384)
37 PRK07337 aminotransferase; Val 99.9 1.6E-25 3.5E-30 197.4 16.6 178 4-199 27-212 (388)
38 PRK09148 aminotransferase; Val 99.9 1.8E-25 3.9E-30 198.4 15.7 179 3-198 26-213 (405)
39 PRK08912 hypothetical protein; 99.9 7.5E-25 1.6E-29 193.0 17.0 173 7-198 26-207 (387)
40 PRK08363 alanine aminotransfer 99.9 6.9E-25 1.5E-29 194.0 16.6 181 4-199 27-215 (398)
41 PRK07590 L,L-diaminopimelate a 99.9 3.7E-25 8.1E-30 196.5 14.8 171 6-199 33-225 (409)
42 PRK07682 hypothetical protein; 99.9 9.4E-25 2E-29 191.8 16.7 175 7-199 20-203 (378)
43 PRK12414 putative aminotransfe 99.9 9.2E-25 2E-29 192.5 16.5 174 7-199 29-211 (384)
44 PRK09275 aspartate aminotransf 99.9 3.9E-25 8.4E-30 200.9 14.3 171 8-197 101-290 (527)
45 PRK06107 aspartate aminotransf 99.9 1.1E-24 2.3E-29 193.1 16.5 177 5-199 31-216 (402)
46 TIGR03537 DapC succinyldiamino 99.9 1.3E-24 2.8E-29 189.3 15.9 172 9-199 2-185 (350)
47 PRK06108 aspartate aminotransf 99.9 1.5E-24 3.2E-29 190.4 16.4 174 7-198 24-206 (382)
48 PRK07550 hypothetical protein; 99.9 1.9E-24 4.2E-29 190.4 17.0 178 4-198 26-211 (386)
49 PRK07309 aromatic amino acid a 99.9 2.3E-24 5E-29 190.4 17.0 176 7-198 30-214 (391)
50 PRK09265 aminotransferase AlaT 99.9 2.7E-24 5.8E-29 190.7 17.3 179 4-199 30-217 (404)
51 PRK05839 hypothetical protein; 99.9 2.5E-24 5.4E-29 189.2 15.7 172 6-198 23-203 (374)
52 PRK09082 methionine aminotrans 99.9 3.3E-24 7.3E-29 189.0 16.5 174 6-198 29-211 (386)
53 PRK08361 aspartate aminotransf 99.9 3.6E-24 7.8E-29 189.0 16.3 174 7-198 33-214 (391)
54 PRK08175 aminotransferase; Val 99.9 4.7E-24 1E-28 188.6 17.0 177 5-198 27-212 (395)
55 PRK07683 aminotransferase A; V 99.9 4.9E-24 1.1E-28 188.1 16.9 173 7-198 28-209 (387)
56 TIGR01265 tyr_nico_aTase tyros 99.9 4.9E-24 1.1E-28 189.0 16.5 183 4-199 28-218 (403)
57 PRK15481 transcriptional regul 99.9 2.8E-24 6.1E-29 192.1 14.8 169 6-198 84-261 (431)
58 PRK05957 aspartate aminotransf 99.9 1.4E-23 3E-28 185.3 16.8 174 7-199 27-209 (389)
59 PRK03317 histidinol-phosphate 99.9 1.4E-23 3.1E-28 183.8 15.2 174 8-199 27-206 (368)
60 PLN02450 1-aminocyclopropane-1 99.9 5.7E-24 1.2E-28 192.1 13.1 180 6-199 37-240 (468)
61 PRK07777 aminotransferase; Val 99.9 2.7E-23 5.8E-28 183.2 16.9 174 7-198 24-207 (387)
62 COG1167 ARO8 Transcriptional r 99.9 1.6E-23 3.6E-28 188.6 15.4 178 7-199 89-276 (459)
63 PRK06836 aspartate aminotransf 99.9 4.1E-23 8.9E-28 182.6 17.5 176 6-198 32-222 (394)
64 PLN02376 1-aminocyclopropane-1 99.9 1.1E-23 2.4E-28 191.3 12.0 147 45-199 88-248 (496)
65 PRK05764 aspartate aminotransf 99.9 6E-23 1.3E-27 181.0 16.2 175 6-198 30-212 (393)
66 PF00155 Aminotran_1_2: Aminot 99.9 4.4E-24 9.6E-29 185.9 8.4 184 8-200 2-198 (363)
67 PRK14809 histidinol-phosphate 99.9 7.6E-23 1.6E-27 178.5 15.8 167 4-198 27-201 (357)
68 PRK02610 histidinol-phosphate 99.9 9E-23 2E-27 179.3 16.2 175 9-198 30-214 (374)
69 PRK07568 aspartate aminotransf 99.9 1.3E-22 2.8E-27 179.1 16.9 175 5-199 28-211 (397)
70 PRK13238 tnaA tryptophanase/L- 99.9 7.8E-23 1.7E-27 184.1 15.3 165 4-188 33-218 (460)
71 PRK01533 histidinol-phosphate 99.9 1.2E-22 2.7E-27 178.1 15.2 163 6-198 28-198 (366)
72 PLN02672 methionine S-methyltr 99.9 1.8E-22 3.9E-27 194.2 16.9 176 3-199 693-878 (1082)
73 TIGR03801 asp_4_decarbox aspar 99.9 9.4E-23 2E-27 185.1 14.2 174 8-197 95-289 (521)
74 PLN02607 1-aminocyclopropane-1 99.9 1.1E-22 2.3E-27 182.8 13.2 147 45-199 89-249 (447)
75 PRK07865 N-succinyldiaminopime 99.9 2E-22 4.2E-27 176.3 13.5 165 4-199 24-197 (364)
76 TIGR03542 DAPAT_plant LL-diami 99.9 3E-22 6.5E-27 177.5 14.8 170 6-199 32-222 (402)
77 PRK05387 histidinol-phosphate 99.9 2.7E-22 5.8E-27 174.4 14.0 161 5-196 22-188 (353)
78 COG1168 MalY Bifunctional PLP- 99.9 6.6E-22 1.4E-26 169.1 15.8 175 6-199 24-207 (388)
79 PRK04870 histidinol-phosphate 99.9 6.4E-22 1.4E-26 172.5 16.1 169 6-198 25-198 (356)
80 TIGR03539 DapC_actino succinyl 99.9 3.3E-22 7E-27 174.6 13.7 165 4-199 18-191 (357)
81 PRK08056 threonine-phosphate d 99.9 1E-21 2.2E-26 171.5 14.8 166 5-199 18-191 (356)
82 PRK14808 histidinol-phosphate 99.9 1.3E-21 2.7E-26 169.8 14.1 163 2-197 14-181 (335)
83 PRK09440 avtA valine--pyruvate 99.9 7.5E-22 1.6E-26 175.5 12.7 173 7-195 30-224 (416)
84 PRK07392 threonine-phosphate d 99.9 2.4E-21 5.1E-26 169.3 15.2 163 8-199 23-193 (360)
85 PRK03158 histidinol-phosphate 99.9 2.1E-21 4.6E-26 169.3 14.6 163 8-199 30-199 (359)
86 PRK06225 aspartate aminotransf 99.9 3E-21 6.6E-26 169.7 15.7 171 5-198 26-205 (380)
87 PRK06358 threonine-phosphate d 99.9 3E-21 6.4E-26 168.5 15.1 163 8-199 20-190 (354)
88 PLN03026 histidinol-phosphate 99.9 5.4E-21 1.2E-25 168.5 15.5 165 5-198 50-219 (380)
89 PRK03967 histidinol-phosphate 99.9 9.6E-21 2.1E-25 164.3 16.5 163 6-198 17-184 (337)
90 PRK08153 histidinol-phosphate 99.9 6.8E-21 1.5E-25 167.1 14.6 165 5-198 29-202 (369)
91 PRK05166 histidinol-phosphate 99.9 5.4E-21 1.2E-25 167.7 13.8 164 6-198 35-206 (371)
92 PRK09105 putative aminotransfe 99.9 6.8E-21 1.5E-25 167.3 14.3 162 7-197 43-211 (370)
93 PRK14807 histidinol-phosphate 99.9 1.4E-20 2.9E-25 164.1 15.7 164 8-196 23-191 (351)
94 TIGR01141 hisC histidinol-phos 99.8 3.3E-20 7.1E-25 160.9 14.5 165 6-198 18-189 (346)
95 PRK03321 putative aminotransfe 99.8 4.3E-20 9.4E-25 160.7 14.3 164 8-199 23-193 (352)
96 PRK00950 histidinol-phosphate 99.8 8.7E-20 1.9E-24 159.1 15.8 164 6-197 33-202 (361)
97 PRK08354 putative aminotransfe 99.8 1.2E-19 2.7E-24 155.7 14.0 151 7-199 8-166 (311)
98 PRK02731 histidinol-phosphate 99.8 2E-19 4.4E-24 157.2 15.0 166 5-199 30-202 (367)
99 PRK07908 hypothetical protein; 99.8 4.2E-19 9.1E-24 154.5 14.3 158 6-198 21-183 (349)
100 cd00617 Tnase_like Tryptophana 99.8 7.5E-19 1.6E-23 156.8 15.0 164 5-188 9-193 (431)
101 KOG0258|consensus 99.8 1.7E-18 3.7E-23 148.2 15.0 180 27-215 89-279 (475)
102 COG0079 HisC Histidinol-phosph 99.8 1.7E-18 3.7E-23 151.2 14.8 162 8-197 23-191 (356)
103 PRK04635 histidinol-phosphate 99.8 6.4E-18 1.4E-22 147.4 13.2 157 6-198 30-193 (354)
104 PRK01688 histidinol-phosphate 99.7 2E-17 4.2E-22 144.3 12.9 134 44-198 51-192 (351)
105 KOG0256|consensus 99.7 2.2E-17 4.7E-22 142.2 11.1 149 45-200 115-276 (471)
106 PRK04781 histidinol-phosphate 99.7 6E-17 1.3E-21 142.0 12.5 138 44-198 53-199 (364)
107 TIGR01822 2am3keto_CoA 2-amino 99.7 2.3E-16 4.9E-21 139.1 15.8 160 5-193 36-210 (393)
108 PRK05664 threonine-phosphate d 99.7 6.6E-17 1.4E-21 139.9 11.1 143 7-196 20-170 (330)
109 PRK06425 histidinol-phosphate 99.7 1.1E-16 2.4E-21 138.6 12.2 129 45-199 35-171 (332)
110 TIGR01825 gly_Cac_T_rel pyrido 99.7 6.4E-16 1.4E-20 135.8 15.6 171 4-197 30-207 (385)
111 TIGR01140 L_thr_O3P_dcar L-thr 99.7 2.6E-16 5.6E-21 136.1 12.0 151 5-198 15-173 (330)
112 PRK06939 2-amino-3-ketobutyrat 99.7 5.6E-16 1.2E-20 136.3 14.1 165 4-193 39-214 (397)
113 cd00609 AAT_like Aspartate ami 99.7 4.1E-15 8.8E-20 127.8 16.1 170 10-198 1-180 (350)
114 TIGR00858 bioF 8-amino-7-oxono 99.6 2.1E-14 4.6E-19 124.4 16.5 167 4-197 13-190 (360)
115 KOG0634|consensus 99.6 7.1E-15 1.5E-19 127.6 12.6 146 43-198 92-252 (472)
116 TIGR03392 FeS_syn_CsdA cystein 99.6 2.1E-14 4.5E-19 127.0 15.3 156 22-193 24-197 (398)
117 cd00613 GDC-P Glycine cleavage 99.6 1.1E-14 2.4E-19 128.5 13.0 162 6-192 19-198 (398)
118 PRK06959 putative threonine-ph 99.6 5E-15 1.1E-19 128.7 9.9 120 46-197 50-177 (339)
119 PLN02721 threonine aldolase 99.6 2.5E-14 5.5E-19 123.9 11.8 158 8-192 6-180 (353)
120 PRK05958 8-amino-7-oxononanoat 99.6 1.1E-13 2.4E-18 121.2 15.3 167 5-194 37-209 (385)
121 PRK10874 cysteine sulfinate de 99.5 2.5E-13 5.4E-18 120.3 15.7 161 17-193 22-200 (401)
122 PRK06234 methionine gamma-lyas 99.5 6.4E-14 1.4E-18 124.4 11.5 126 46-197 57-195 (400)
123 TIGR01977 am_tr_V_EF2568 cyste 99.5 2.2E-13 4.7E-18 119.3 14.0 151 25-193 11-177 (376)
124 TIGR01437 selA_rel uncharacter 99.5 3.3E-13 7.1E-18 118.4 14.8 161 4-193 4-189 (363)
125 PRK11658 UDP-4-amino-4-deoxy-L 99.5 5.3E-13 1.2E-17 117.7 13.7 143 25-193 11-158 (379)
126 cd06502 TA_like Low-specificit 99.5 5.6E-13 1.2E-17 114.9 12.5 148 24-193 8-169 (338)
127 cd06453 SufS_like Cysteine des 99.5 1E-12 2.2E-17 115.0 14.1 157 19-193 4-179 (373)
128 PRK09295 bifunctional cysteine 99.5 1.8E-12 3.9E-17 115.1 15.3 162 16-193 25-204 (406)
129 cd06450 DOPA_deC_like DOPA dec 99.5 9.8E-13 2.1E-17 113.7 13.2 162 25-196 10-191 (345)
130 TIGR01976 am_tr_V_VC1184 cyste 99.5 1.8E-12 3.9E-17 114.4 14.3 160 17-192 20-195 (397)
131 TIGR01979 sufS cysteine desulf 99.4 2.7E-12 5.9E-17 113.6 15.0 167 5-193 15-199 (403)
132 PRK09028 cystathionine beta-ly 99.4 1.7E-12 3.7E-17 115.0 13.4 124 45-194 53-187 (394)
133 PLN02242 methionine gamma-lyas 99.4 9.2E-13 2E-17 117.7 11.6 128 46-198 69-208 (418)
134 PRK15407 lipopolysaccharide bi 99.4 3.4E-12 7.3E-17 114.7 15.1 124 53-193 65-196 (438)
135 PLN02822 serine palmitoyltrans 99.4 2E-12 4.4E-17 117.4 13.4 170 5-198 107-290 (481)
136 cd06454 KBL_like KBL_like; thi 99.4 2.2E-12 4.7E-17 111.6 12.9 144 27-193 17-172 (349)
137 PRK10534 L-threonine aldolase; 99.4 1E-12 2.2E-17 113.4 10.8 147 24-193 10-170 (333)
138 PLN02855 Bifunctional selenocy 99.4 3.1E-12 6.8E-17 114.2 14.0 166 6-193 30-213 (424)
139 cd00378 SHMT Serine-glycine hy 99.4 1.2E-12 2.6E-17 115.8 11.2 167 8-197 20-204 (402)
140 TIGR03588 PseC UDP-4-keto-6-de 99.4 3.6E-12 7.7E-17 112.3 14.1 147 24-193 6-158 (380)
141 cd06452 SepCysS Sep-tRNA:Cys-t 99.4 4.9E-12 1.1E-16 110.6 14.6 125 53-193 46-179 (361)
142 TIGR03403 nifS_epsilon cystein 99.4 3.6E-12 7.8E-17 112.2 13.0 161 19-193 4-180 (382)
143 TIGR02379 ECA_wecE TDP-4-keto- 99.4 6.1E-12 1.3E-16 111.0 14.1 146 24-194 7-157 (376)
144 cd06451 AGAT_like Alanine-glyo 99.4 3.7E-12 8E-17 110.8 12.3 149 23-192 7-163 (356)
145 PRK00451 glycine dehydrogenase 99.4 3.8E-12 8.2E-17 114.4 12.7 153 8-186 69-238 (447)
146 TIGR02080 O_succ_thio_ly O-suc 99.4 4.3E-12 9.4E-17 112.1 12.5 123 50-195 50-178 (382)
147 PRK09331 Sep-tRNA:Cys-tRNA syn 99.4 1.3E-11 2.9E-16 109.0 15.2 153 25-193 31-198 (387)
148 PRK07049 methionine gamma-lyas 99.4 8.3E-12 1.8E-16 111.8 13.7 124 50-195 82-222 (427)
149 PLN02994 1-aminocyclopropane-1 99.4 6.1E-13 1.3E-17 103.0 5.4 94 8-115 58-153 (153)
150 PRK07811 cystathionine gamma-s 99.4 6.9E-12 1.5E-16 111.1 12.2 124 46-195 54-188 (388)
151 TIGR02539 SepCysS Sep-tRNA:Cys 99.4 1.3E-11 2.8E-16 108.4 13.6 125 53-194 53-187 (370)
152 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.4 1.1E-11 2.4E-16 109.1 13.1 126 52-195 28-158 (375)
153 PRK08133 O-succinylhomoserine 99.4 1.3E-11 2.7E-16 109.5 13.2 116 53-194 63-187 (390)
154 PRK14012 cysteine desulfurase; 99.4 2.7E-11 5.8E-16 107.6 15.4 158 16-188 5-181 (404)
155 TIGR03812 tyr_de_CO2_Arch tyro 99.4 3.1E-11 6.6E-16 105.6 15.4 125 54-195 62-195 (373)
156 PRK02948 cysteine desulfurase; 99.3 2E-11 4.2E-16 107.4 13.9 156 17-187 3-174 (381)
157 PRK08776 cystathionine gamma-s 99.3 9.9E-12 2.1E-16 110.6 11.8 116 53-194 62-186 (405)
158 cd00615 Orn_deC_like Ornithine 99.3 1.3E-11 2.8E-16 105.3 12.0 130 47-193 55-193 (294)
159 KOG1412|consensus 99.3 3E-13 6.4E-18 113.4 1.5 162 45-218 235-410 (410)
160 PRK08045 cystathionine gamma-s 99.3 1.6E-11 3.4E-16 108.7 12.4 124 49-195 50-179 (386)
161 TIGR00707 argD acetylornithine 99.3 1.9E-11 4.2E-16 107.1 12.9 177 2-198 22-219 (379)
162 PLN02483 serine palmitoyltrans 99.3 2.3E-11 5E-16 110.7 13.7 167 4-193 97-280 (489)
163 PLN02409 serine--glyoxylate am 99.3 2.6E-11 5.7E-16 107.7 13.6 154 22-193 16-179 (401)
164 TIGR02006 IscS cysteine desulf 99.3 4.4E-11 9.6E-16 106.1 14.9 157 17-188 6-179 (402)
165 PRK07050 cystathionine beta-ly 99.3 1.4E-11 3E-16 109.4 11.3 123 45-193 57-190 (394)
166 PRK08249 cystathionine gamma-s 99.3 2.2E-11 4.7E-16 108.2 12.3 122 49-196 62-192 (398)
167 TIGR03301 PhnW-AepZ 2-aminoeth 99.3 4.6E-11 1E-15 103.4 14.0 151 23-192 7-164 (355)
168 PRK04366 glycine dehydrogenase 99.3 2.5E-11 5.5E-16 110.3 12.8 161 12-192 73-247 (481)
169 cd01494 AAT_I Aspartate aminot 99.3 3.2E-11 6.9E-16 92.9 11.1 131 53-199 2-138 (170)
170 TIGR03402 FeS_nifS cysteine de 99.3 8.2E-11 1.8E-15 103.4 15.0 155 19-193 4-176 (379)
171 PRK08861 cystathionine gamma-s 99.3 2.8E-11 6.1E-16 107.1 11.8 119 50-194 52-179 (388)
172 PRK08574 cystathionine gamma-s 99.3 3.4E-11 7.4E-16 106.5 12.3 117 51-193 53-177 (385)
173 PRK05939 hypothetical protein; 99.3 5.9E-11 1.3E-15 105.4 13.1 116 52-193 45-171 (397)
174 PRK13479 2-aminoethylphosphona 99.3 5.8E-11 1.3E-15 103.9 12.8 147 24-187 14-167 (368)
175 PRK06460 hypothetical protein; 99.3 3.5E-11 7.6E-16 106.1 11.3 120 50-195 44-172 (376)
176 PRK02627 acetylornithine amino 99.3 8.6E-11 1.9E-15 103.7 13.7 176 3-198 35-231 (396)
177 TIGR03235 DNA_S_dndA cysteine 99.3 1.1E-10 2.3E-15 101.7 14.1 152 22-188 6-175 (353)
178 PRK07503 methionine gamma-lyas 99.3 6.2E-11 1.3E-15 105.5 12.8 123 46-194 58-191 (403)
179 TIGR00713 hemL glutamate-1-sem 99.3 8E-11 1.7E-15 105.2 13.5 177 4-198 45-244 (423)
180 PRK07504 O-succinylhomoserine 99.3 7.3E-11 1.6E-15 104.9 13.1 119 51-195 65-192 (398)
181 PRK08247 cystathionine gamma-s 99.3 3.8E-11 8.2E-16 105.5 11.1 116 51-193 52-176 (366)
182 PRK05967 cystathionine beta-ly 99.2 6.4E-11 1.4E-15 105.0 10.9 100 81-195 83-191 (395)
183 PRK06702 O-acetylhomoserine am 99.2 8.5E-11 1.8E-15 105.3 11.8 116 53-193 63-187 (432)
184 cd00610 OAT_like Acetyl ornith 99.2 1.2E-10 2.6E-15 103.1 12.7 181 4-196 33-238 (413)
185 PRK07810 O-succinylhomoserine 99.2 1.6E-10 3.5E-15 102.9 12.9 121 49-195 68-197 (403)
186 TIGR01325 O_suc_HS_sulf O-succ 99.2 2.4E-10 5.1E-15 101.0 13.1 119 51-195 54-181 (380)
187 TIGR01324 cysta_beta_ly_B cyst 99.2 1.6E-10 3.6E-15 101.9 11.9 122 45-193 42-175 (377)
188 PRK01278 argD acetylornithine 99.2 2.9E-10 6.4E-15 100.4 13.5 175 4-197 28-223 (389)
189 PLN02509 cystathionine beta-ly 99.2 1.3E-10 2.9E-15 104.9 11.4 125 44-193 124-257 (464)
190 PRK13520 L-tyrosine decarboxyl 99.2 6.2E-10 1.3E-14 97.2 15.1 152 25-195 31-193 (371)
191 PRK13392 5-aminolevulinate syn 99.2 4.8E-10 1E-14 99.7 14.5 163 6-193 45-218 (410)
192 PRK06767 methionine gamma-lyas 99.2 4.9E-10 1.1E-14 99.2 14.4 123 49-194 59-187 (386)
193 PRK08248 O-acetylhomoserine am 99.2 1.7E-10 3.7E-15 103.5 11.3 115 53-193 66-189 (431)
194 TIGR01328 met_gam_lyase methio 99.2 1.4E-10 3.1E-15 102.8 10.6 116 53-194 61-185 (391)
195 PRK08064 cystathionine beta-ly 99.2 3.1E-10 6.8E-15 100.6 12.3 116 53-195 56-180 (390)
196 PLN02651 cysteine desulfurase 99.2 7.1E-10 1.5E-14 97.1 14.3 154 20-188 5-175 (364)
197 PRK07671 cystathionine beta-ly 99.2 3.7E-10 7.9E-15 99.7 12.0 116 53-195 52-176 (377)
198 cd00616 AHBA_syn 3-amino-5-hyd 99.2 4.4E-10 9.5E-15 97.4 12.1 125 47-193 14-143 (352)
199 PRK07179 hypothetical protein; 99.2 9.6E-10 2.1E-14 97.7 14.5 161 5-194 52-222 (407)
200 TIGR01326 OAH_OAS_sulfhy OAH/O 99.2 3.1E-10 6.6E-15 101.5 11.3 117 51-193 57-182 (418)
201 COG0399 WecE Predicted pyridox 99.1 1E-09 2.2E-14 96.1 14.0 141 27-187 14-155 (374)
202 PF01041 DegT_DnrJ_EryC1: DegT 99.1 3.5E-10 7.6E-15 99.2 10.8 140 29-188 6-147 (363)
203 PRK07269 cystathionine gamma-s 99.1 1.7E-10 3.6E-15 101.5 8.4 120 49-193 52-176 (364)
204 PRK05994 O-acetylhomoserine am 99.1 4.6E-10 1E-14 100.6 11.3 122 46-193 56-188 (427)
205 PRK07582 cystathionine gamma-l 99.1 2.8E-10 6.1E-15 100.0 9.6 115 49-193 49-172 (366)
206 PRK03244 argD acetylornithine 99.1 7.4E-10 1.6E-14 98.0 12.3 176 4-197 40-231 (398)
207 PLN03227 serine palmitoyltrans 99.1 1.1E-09 2.4E-14 97.2 12.9 150 24-193 11-178 (392)
208 TIGR01329 cysta_beta_ly_E cyst 99.1 9.1E-10 2E-14 97.2 11.8 122 44-192 38-170 (378)
209 PRK06084 O-acetylhomoserine am 99.1 6.3E-10 1.4E-14 99.7 10.9 116 52-193 59-183 (425)
210 cd00614 CGS_like CGS_like: Cys 99.1 1.6E-09 3.6E-14 95.2 12.5 124 45-194 32-166 (369)
211 TIGR03576 pyridox_MJ0158 pyrid 99.1 3.1E-09 6.7E-14 92.8 13.2 136 26-196 34-181 (346)
212 PRK06176 cystathionine gamma-s 99.0 2E-09 4.4E-14 95.1 11.3 116 53-195 52-176 (380)
213 KOG0633|consensus 99.0 5.9E-10 1.3E-14 91.9 6.4 115 73-197 84-205 (375)
214 TIGR02326 transamin_PhnW 2-ami 99.0 5.3E-09 1.1E-13 91.4 12.8 146 23-187 11-165 (363)
215 PRK08134 O-acetylhomoserine am 99.0 3.2E-09 7E-14 95.3 11.2 122 45-192 56-188 (433)
216 PRK00011 glyA serine hydroxyme 99.0 4.7E-09 1E-13 93.4 11.3 101 84-192 94-202 (416)
217 PRK05968 hypothetical protein; 98.9 1.1E-08 2.5E-13 90.6 11.8 117 53-196 65-190 (389)
218 TIGR01821 5aminolev_synth 5-am 98.9 3.7E-08 8E-13 87.4 14.2 163 6-193 44-217 (402)
219 TIGR03531 selenium_SpcS O-phos 98.9 9.3E-09 2E-13 92.3 9.8 112 80-194 126-246 (444)
220 PRK00854 rocD ornithine--oxo-a 98.9 4.6E-08 1E-12 86.7 14.0 177 4-199 38-237 (401)
221 COG3977 Alanine-alpha-ketoisov 98.9 9.3E-09 2E-13 86.4 8.1 164 9-193 32-222 (417)
222 COG0520 csdA Selenocysteine ly 98.8 2.4E-07 5.2E-12 82.5 15.8 158 17-188 25-199 (405)
223 PRK00062 glutamate-1-semialdeh 98.8 1.1E-07 2.4E-12 85.2 13.3 180 3-198 46-246 (426)
224 PRK02769 histidine decarboxyla 98.8 1.5E-07 3.3E-12 83.2 13.8 113 77-194 84-204 (380)
225 PRK09064 5-aminolevulinate syn 98.8 2.1E-07 4.6E-12 82.6 14.5 163 6-193 45-218 (407)
226 KOG1411|consensus 98.8 4E-09 8.6E-14 89.9 2.9 151 50-214 260-426 (427)
227 PRK02936 argD acetylornithine 98.7 2.5E-07 5.4E-12 81.3 13.9 177 3-199 25-217 (377)
228 PRK04311 selenocysteine syntha 98.7 2.9E-07 6.3E-12 83.4 14.3 157 8-187 80-256 (464)
229 PRK04073 rocD ornithine--oxo-a 98.7 2.5E-07 5.5E-12 82.0 13.5 175 4-198 37-235 (396)
230 PF12897 Aminotran_MocR: Alani 98.7 1.4E-07 3.1E-12 81.9 10.8 132 45-193 62-217 (425)
231 COG1448 TyrB Aspartate/tyrosin 98.7 6.7E-09 1.5E-13 89.7 2.5 132 73-210 250-395 (396)
232 PRK07812 O-acetylhomoserine am 98.7 1.5E-07 3.2E-12 84.7 11.0 119 46-187 62-191 (436)
233 TIGR02618 tyr_phenol_ly tyrosi 98.7 5.1E-07 1.1E-11 80.8 13.7 141 28-188 50-211 (450)
234 TIGR00474 selA seryl-tRNA(sec) 98.7 9.8E-07 2.1E-11 79.7 15.2 157 8-187 75-251 (454)
235 PRK05613 O-acetylhomoserine am 98.6 3.1E-07 6.7E-12 82.7 11.4 121 45-188 61-192 (437)
236 PLN03032 serine decarboxylase; 98.6 7.8E-07 1.7E-11 78.5 13.7 116 74-194 82-207 (374)
237 PTZ00125 ornithine aminotransf 98.6 8.2E-07 1.8E-11 78.6 13.5 177 4-198 28-227 (400)
238 PRK13393 5-aminolevulinate syn 98.6 1.6E-06 3.5E-11 77.1 15.4 163 6-193 44-217 (406)
239 PRK12381 bifunctional succinyl 98.5 1.5E-06 3.2E-11 77.5 12.8 174 3-198 35-232 (406)
240 TIGR01814 kynureninase kynuren 98.5 2.8E-06 6.1E-11 75.5 14.4 108 74-188 85-208 (406)
241 PF00266 Aminotran_5: Aminotra 98.5 5E-06 1.1E-10 72.9 13.9 157 17-188 2-176 (371)
242 KOG1549|consensus 98.5 8.7E-06 1.9E-10 72.0 15.1 161 6-188 41-218 (428)
243 COG0075 Serine-pyruvate aminot 98.5 1.6E-06 3.4E-11 76.3 10.4 124 80-212 59-189 (383)
244 PRK07505 hypothetical protein; 98.4 4.9E-06 1.1E-10 73.9 13.0 159 4-193 43-219 (402)
245 PRK08114 cystathionine beta-ly 98.4 3E-06 6.5E-11 75.3 11.3 96 80-188 80-186 (395)
246 PLN02263 serine decarboxylase 98.4 8.2E-06 1.8E-10 73.7 13.2 137 52-196 130-276 (470)
247 TIGR01788 Glu-decarb-GAD gluta 98.4 1.1E-05 2.3E-10 72.6 14.0 111 77-194 101-233 (431)
248 PRK08088 4-aminobutyrate amino 98.4 1.3E-05 2.9E-10 71.8 14.6 183 4-198 38-248 (425)
249 COG1104 NifS Cysteine sulfinat 98.4 1.5E-05 3.2E-10 70.0 14.1 156 17-187 4-177 (386)
250 PF01053 Cys_Met_Meta_PP: Cys/ 98.3 4.9E-06 1.1E-10 73.8 10.8 122 45-193 47-181 (386)
251 PRK05093 argD bifunctional N-s 98.3 1.2E-05 2.5E-10 71.6 13.2 174 4-198 37-233 (403)
252 PRK04260 acetylornithine amino 98.3 1.9E-05 4.1E-10 69.5 14.1 170 4-198 26-214 (375)
253 PRK06434 cystathionine gamma-l 98.3 5.2E-06 1.1E-10 73.6 9.6 108 53-187 66-182 (384)
254 PRK05937 8-amino-7-oxononanoat 98.3 1.3E-05 2.9E-10 70.4 11.9 163 8-193 5-183 (370)
255 PLN02624 ornithine-delta-amino 98.2 3.1E-05 6.8E-10 70.5 13.9 178 4-197 72-272 (474)
256 PRK13237 tyrosine phenol-lyase 98.2 3.9E-05 8.5E-10 69.0 12.6 129 44-188 71-218 (460)
257 TIGR01885 Orn_aminotrans ornit 98.2 6.2E-05 1.4E-09 66.8 13.9 178 4-198 34-235 (401)
258 TIGR03246 arg_catab_astC succi 98.1 4.7E-05 1E-09 67.6 13.0 175 2-195 30-225 (397)
259 PF01212 Beta_elim_lyase: Beta 98.1 7.2E-06 1.6E-10 70.0 6.9 147 26-191 7-169 (290)
260 PLN02414 glycine dehydrogenase 98.1 3.3E-05 7.2E-10 75.5 12.0 103 81-188 587-703 (993)
261 PF01276 OKR_DC_1: Orn/Lys/Arg 98.0 3.6E-05 7.9E-10 68.6 10.1 130 47-193 61-207 (417)
262 PLN00144 acetylornithine trans 98.0 8.3E-05 1.8E-09 65.8 12.1 180 2-198 10-216 (382)
263 COG0626 MetC Cystathionine bet 98.0 0.00013 2.7E-09 64.7 12.3 119 51-194 63-190 (396)
264 COG0076 GadB Glutamate decarbo 97.9 0.00029 6.4E-09 63.9 13.5 163 24-197 72-251 (460)
265 cd00611 PSAT_like Phosphoserin 97.9 7.8E-05 1.7E-09 65.3 9.2 148 23-188 7-170 (355)
266 PRK08360 4-aminobutyrate amino 97.9 0.00049 1.1E-08 62.2 14.1 183 4-198 38-253 (443)
267 PRK03715 argD acetylornithine 97.8 0.00055 1.2E-08 60.9 14.1 173 3-195 32-225 (395)
268 PLN02271 serine hydroxymethylt 97.8 0.00027 5.9E-09 65.0 11.7 124 53-188 195-333 (586)
269 PRK04612 argD acetylornithine 97.8 0.00057 1.2E-08 61.1 13.4 178 3-198 36-236 (408)
270 PRK06058 4-aminobutyrate amino 97.8 0.00061 1.3E-08 61.5 13.6 183 3-197 52-267 (443)
271 PRK13034 serine hydroxymethylt 97.8 0.00044 9.5E-09 62.0 12.3 97 82-188 95-203 (416)
272 PLN02590 probable tyrosine dec 97.8 0.001 2.2E-08 61.5 14.8 146 46-196 161-330 (539)
273 PRK15029 arginine decarboxylas 97.8 0.00043 9.2E-09 66.2 12.4 126 50-192 203-350 (755)
274 PRK09792 4-aminobutyrate trans 97.7 0.0013 2.7E-08 59.1 14.6 182 4-198 37-247 (421)
275 PRK05367 glycine dehydrogenase 97.7 0.00024 5.2E-09 69.6 9.6 130 50-188 537-677 (954)
276 PRK07495 4-aminobutyrate amino 97.6 0.0011 2.5E-08 59.5 13.0 177 4-196 37-245 (425)
277 PLN02880 tyrosine decarboxylas 97.6 0.0023 5E-08 58.6 14.5 143 47-195 114-281 (490)
278 TIGR00709 dat 2,4-diaminobutyr 97.6 0.0027 5.9E-08 57.3 14.5 186 3-198 35-255 (442)
279 KOG0053|consensus 97.5 0.00051 1.1E-08 60.8 9.0 101 80-195 95-204 (409)
280 PF00282 Pyridoxal_deC: Pyrido 97.5 0.00084 1.8E-08 59.4 10.5 143 46-194 70-235 (373)
281 PRK04013 argD acetylornithine/ 97.5 0.002 4.3E-08 56.8 12.5 176 3-198 20-211 (364)
282 COG1982 LdcC Arginine/lysine/o 97.5 0.0015 3.2E-08 60.0 11.5 102 80-188 89-202 (557)
283 TIGR00461 gcvP glycine dehydro 97.5 0.00059 1.3E-08 66.4 9.2 134 45-188 517-665 (939)
284 PRK05964 adenosylmethionine--8 97.5 0.0035 7.7E-08 56.2 13.7 179 4-196 39-247 (423)
285 PRK06918 4-aminobutyrate amino 97.4 0.0042 9.1E-08 56.2 14.0 185 3-198 50-268 (451)
286 PF00464 SHMT: Serine hydroxym 97.4 0.00069 1.5E-08 60.2 8.6 124 53-187 67-203 (399)
287 COG4992 ArgD Ornithine/acetylo 97.4 0.0028 6.1E-08 56.0 12.2 175 2-195 37-230 (404)
288 PTZ00094 serine hydroxymethylt 97.4 0.0013 2.9E-08 59.5 10.5 157 8-188 35-217 (452)
289 PRK06777 4-aminobutyrate amino 97.4 0.0048 1E-07 55.4 13.9 180 4-198 37-247 (421)
290 PRK12566 glycine dehydrogenase 97.4 0.0016 3.4E-08 63.4 11.2 136 44-188 529-678 (954)
291 TIGR02407 ectoine_ectB diamino 97.4 0.0072 1.6E-07 54.1 14.6 182 4-195 32-240 (412)
292 COG1103 Archaea-specific pyrid 97.4 0.0029 6.3E-08 53.2 10.9 120 53-187 63-192 (382)
293 COG2873 MET17 O-acetylhomoseri 97.4 0.0013 2.8E-08 57.4 9.1 118 46-187 55-183 (426)
294 PLN02955 8-amino-7-oxononanoat 97.4 0.021 4.6E-07 52.0 17.3 166 7-198 102-294 (476)
295 TIGR03799 NOD_PanD_pyr putativ 97.4 0.0019 4E-08 59.6 10.6 112 80-195 162-307 (522)
296 TIGR00700 GABAtrnsam 4-aminobu 97.3 0.0051 1.1E-07 55.1 13.1 182 4-198 30-246 (420)
297 PRK06541 hypothetical protein; 97.3 0.0045 9.8E-08 56.2 12.8 181 3-195 48-267 (460)
298 COG2008 GLY1 Threonine aldolas 97.3 0.0029 6.2E-08 54.8 10.7 151 25-193 11-176 (342)
299 PLN03226 serine hydroxymethylt 97.3 0.008 1.7E-07 54.9 13.9 101 82-188 105-218 (475)
300 PLN02724 Molybdenum cofactor s 97.3 0.006 1.3E-07 59.2 13.3 164 16-188 36-237 (805)
301 PRK08117 4-aminobutyrate amino 97.2 0.0094 2E-07 53.6 13.8 179 4-197 40-255 (433)
302 COG0112 GlyA Glycine/serine hy 97.2 0.0021 4.5E-08 56.4 9.0 147 25-187 37-200 (413)
303 PRK15400 lysine decarboxylase 97.0 0.01 2.2E-07 56.5 12.2 126 49-193 192-334 (714)
304 PRK13580 serine hydroxymethylt 97.0 0.0037 8E-08 57.0 8.9 120 53-188 96-255 (493)
305 KOG1368|consensus 97.0 0.018 3.9E-07 49.1 11.8 167 26-210 34-219 (384)
306 TIGR03372 putres_am_tran putre 96.9 0.025 5.3E-07 51.2 13.2 177 4-195 72-270 (442)
307 PF04864 Alliinase_C: Allinase 96.9 0.0018 3.8E-08 56.0 5.4 139 45-200 32-179 (363)
308 PRK12389 glutamate-1-semialdeh 96.9 0.039 8.5E-07 49.6 14.4 175 4-195 50-246 (428)
309 PRK13578 ornithine decarboxyla 96.9 0.016 3.4E-07 55.3 11.8 127 49-193 171-321 (720)
310 PRK09264 diaminobutyrate--2-ox 96.9 0.037 8.1E-07 49.7 13.9 183 4-195 36-244 (425)
311 COG0001 HemL Glutamate-1-semia 96.9 0.049 1.1E-06 48.7 14.2 176 5-198 51-249 (432)
312 COG1003 GcvP Glycine cleavage 96.8 0.017 3.7E-07 51.5 10.4 132 44-188 95-241 (496)
313 TIGR03811 tyr_de_CO2_Ent tyros 96.6 0.11 2.5E-06 48.8 15.5 87 105-195 224-325 (608)
314 PRK07482 hypothetical protein; 96.6 0.051 1.1E-06 49.4 12.9 181 3-195 46-266 (461)
315 PRK15399 lysine decarboxylase 96.6 0.031 6.8E-07 53.2 11.6 124 50-193 193-334 (713)
316 PRK08593 4-aminobutyrate amino 96.6 0.068 1.5E-06 48.4 13.4 101 4-116 39-142 (445)
317 PLN02482 glutamate-1-semialdeh 96.5 0.092 2E-06 48.0 14.1 179 4-198 96-295 (474)
318 PF06838 Met_gamma_lyase: Meth 96.5 0.0099 2.2E-07 52.0 7.2 108 82-198 77-205 (403)
319 PRK11522 putrescine--2-oxoglut 96.5 0.072 1.6E-06 48.5 13.2 179 4-195 79-277 (459)
320 PRK05965 hypothetical protein; 96.5 0.068 1.5E-06 48.6 13.0 180 4-195 43-261 (459)
321 PRK05367 glycine dehydrogenase 96.4 0.03 6.5E-07 55.2 10.8 142 12-188 81-242 (954)
322 PRK06082 4-aminobutyrate amino 96.4 0.074 1.6E-06 48.4 12.8 176 3-195 68-274 (459)
323 PRK06062 hypothetical protein; 96.3 0.19 4.1E-06 45.6 14.6 179 4-195 50-260 (451)
324 PRK00615 glutamate-1-semialdeh 96.3 0.074 1.6E-06 48.0 11.9 175 4-195 50-247 (433)
325 PRK07986 adenosylmethionine--8 96.2 0.11 2.4E-06 46.8 12.6 179 4-195 40-251 (428)
326 COG0156 BioF 7-keto-8-aminopel 96.2 0.17 3.7E-06 45.0 13.2 163 4-193 36-211 (388)
327 PLN02760 4-aminobutyrate:pyruv 96.1 0.19 4E-06 46.4 13.9 181 3-195 85-306 (504)
328 PRK06931 diaminobutyrate--2-ox 96.1 0.24 5.2E-06 45.0 14.3 109 2-119 53-163 (459)
329 PRK12403 putative aminotransfe 96.1 0.15 3.2E-06 46.4 12.7 179 4-195 51-268 (460)
330 COG0160 GabT 4-aminobutyrate a 96.1 0.31 6.7E-06 44.1 14.5 183 3-197 52-270 (447)
331 PRK08742 adenosylmethionine--8 96.0 0.22 4.7E-06 45.5 13.6 182 4-196 61-284 (472)
332 PRK07046 aminotransferase; Val 95.9 0.34 7.4E-06 44.0 14.5 171 4-193 72-262 (453)
333 PLN02414 glycine dehydrogenase 95.9 0.055 1.2E-06 53.5 9.9 142 11-186 107-268 (993)
334 COG1921 SelA Selenocysteine sy 95.9 0.29 6.3E-06 43.4 13.2 163 7-187 20-193 (395)
335 PRK06938 diaminobutyrate--2-ox 95.8 0.53 1.2E-05 42.9 15.3 181 3-195 59-277 (464)
336 PF05889 SLA_LP_auto_ag: Solub 95.8 0.027 5.9E-07 49.7 6.5 125 80-211 77-209 (389)
337 TIGR02617 tnaA_trp_ase tryptop 95.8 0.099 2.1E-06 47.2 10.1 159 4-188 38-224 (467)
338 PRK05639 4-aminobutyrate amino 95.7 0.36 7.9E-06 43.9 13.9 103 4-117 50-153 (457)
339 TIGR00508 bioA adenosylmethion 95.7 0.18 3.9E-06 45.4 11.8 177 4-195 42-254 (427)
340 PRK06916 adenosylmethionine--8 95.7 0.25 5.4E-06 44.9 12.6 179 4-195 53-270 (460)
341 PF00202 Aminotran_3: Aminotra 95.7 0.07 1.5E-06 46.5 8.6 181 3-195 12-223 (339)
342 PRK05769 4-aminobutyrate amino 95.6 0.47 1E-05 42.9 14.0 105 4-117 51-155 (441)
343 PRK06209 glutamate-1-semialdeh 95.6 0.28 6E-06 44.2 12.5 174 4-197 45-231 (431)
344 PRK05630 adenosylmethionine--8 95.6 0.21 4.5E-06 45.0 11.6 101 3-116 36-145 (422)
345 PRK07678 aminotransferase; Val 95.6 0.44 9.6E-06 43.2 13.7 178 4-195 44-259 (451)
346 KOG2862|consensus 95.6 0.19 4E-06 43.3 10.3 100 82-188 73-180 (385)
347 PRK07480 putative aminotransfe 95.5 0.32 7E-06 44.2 12.6 22 172-195 244-265 (456)
348 PRK09221 beta alanine--pyruvat 95.5 0.34 7.3E-06 43.9 12.7 180 4-195 46-264 (445)
349 PRK06943 adenosylmethionine--8 95.3 0.36 7.8E-06 43.8 12.1 179 4-195 51-268 (453)
350 PRK06917 hypothetical protein; 95.3 0.73 1.6E-05 41.8 14.0 179 4-195 28-246 (447)
351 PRK07030 adenosylmethionine--8 95.3 0.85 1.8E-05 41.6 14.5 179 4-195 44-261 (466)
352 PRK03080 phosphoserine aminotr 95.2 0.13 2.8E-06 45.4 8.9 143 24-188 21-171 (378)
353 PRK07483 hypothetical protein; 95.2 0.53 1.2E-05 42.6 12.9 102 3-116 26-135 (443)
354 PRK06105 aminotransferase; Pro 95.2 0.62 1.3E-05 42.4 13.4 104 4-116 45-154 (460)
355 PRK13360 omega amino acid--pyr 95.2 0.66 1.4E-05 42.0 13.5 180 4-195 43-261 (442)
356 PRK07481 hypothetical protein; 95.1 0.59 1.3E-05 42.4 12.8 105 3-116 38-149 (449)
357 PRK06173 adenosylmethionine--8 95.0 0.46 9.9E-06 42.9 12.0 178 4-195 41-253 (429)
358 TIGR01364 serC_1 phosphoserine 94.9 0.49 1.1E-05 41.4 11.6 99 81-188 59-162 (349)
359 PRK08297 L-lysine aminotransfe 94.8 0.69 1.5E-05 41.9 12.6 22 172-195 250-271 (443)
360 PRK07036 hypothetical protein; 94.8 0.72 1.6E-05 42.1 12.6 104 4-117 48-158 (466)
361 COG4100 Cystathionine beta-lya 94.6 0.88 1.9E-05 39.1 11.6 107 81-197 87-215 (416)
362 PF03841 SelA: L-seryl-tRNA se 94.5 0.013 2.9E-07 51.3 0.7 147 22-187 14-176 (367)
363 TIGR03251 LAT_fam L-lysine 6-t 94.4 1.1 2.4E-05 40.4 12.8 23 172-196 243-265 (431)
364 TIGR00699 GABAtrns_euk 4-amino 94.0 1.4 3E-05 40.3 12.6 183 4-196 55-298 (464)
365 TIGR01366 serC_3 phosphoserine 93.6 0.36 7.8E-06 42.4 8.0 144 23-188 11-162 (361)
366 PLN02397 aspartate transaminas 93.2 0.12 2.6E-06 46.3 4.4 43 172-214 380-422 (423)
367 KOG1401|consensus 92.9 6.1 0.00013 35.3 14.3 182 2-197 51-254 (433)
368 PRK06148 hypothetical protein; 92.5 2.3 4.9E-05 42.7 12.4 99 4-116 621-719 (1013)
369 COG0161 BioA Adenosylmethionin 92.4 1.5 3.2E-05 39.8 10.1 100 3-115 40-149 (449)
370 PRK06149 hypothetical protein; 92.2 4.4 9.6E-05 40.5 14.1 99 3-115 581-679 (972)
371 PRK05355 3-phosphoserine/phosp 91.6 3.3 7.2E-05 36.3 11.3 148 23-188 11-173 (360)
372 KOG1383|consensus 91.6 0.4 8.8E-06 43.2 5.5 110 80-196 141-262 (491)
373 COG3033 TnaA Tryptophanase [Am 91.3 4.9 0.00011 35.5 11.6 134 43-188 71-226 (471)
374 TIGR00461 gcvP glycine dehydro 90.4 3 6.6E-05 41.3 10.7 141 13-187 70-229 (939)
375 TIGR01365 serC_2 phosphoserine 88.5 4.4 9.5E-05 35.9 9.5 92 80-187 61-161 (374)
376 PLN02452 phosphoserine transam 84.7 21 0.00045 31.6 11.6 101 80-188 74-177 (365)
377 PRK12462 phosphoserine aminotr 84.0 10 0.00022 33.5 9.4 99 77-187 69-174 (364)
378 KOG1404|consensus 83.5 33 0.00072 30.7 12.1 179 2-195 45-258 (442)
379 KOG0628|consensus 82.8 2.4 5.1E-05 38.5 4.9 86 105-195 184-277 (511)
380 COG0403 GcvP Glycine cleavage 81.6 21 0.00045 32.3 10.2 148 12-185 80-244 (450)
381 PF02347 GDC-P: Glycine cleava 80.3 5.3 0.00011 36.1 6.3 86 84-186 134-231 (429)
382 PLN02974 adenosylmethionine-8- 78.7 57 0.0012 32.2 13.2 22 172-195 610-631 (817)
383 PRK09257 aromatic amino acid a 77.9 2.2 4.9E-05 37.6 3.2 39 172-210 357-395 (396)
384 PTZ00376 aspartate aminotransf 75.3 4.4 9.6E-05 35.9 4.4 42 172-213 362-403 (404)
385 COG3844 Kynureninase [Amino ac 74.0 16 0.00035 32.0 7.1 123 52-193 73-206 (407)
386 PLN02672 methionine S-methyltr 66.1 68 0.0015 32.7 10.6 132 43-187 418-563 (1082)
387 PF10087 DUF2325: Uncharacteri 65.1 44 0.00095 23.2 9.1 85 111-209 10-95 (97)
388 KOG1359|consensus 65.0 45 0.00098 28.9 7.9 160 7-193 67-233 (417)
389 KOG0629|consensus 64.9 27 0.00059 31.6 6.8 63 127-194 223-294 (510)
390 KOG2040|consensus 62.7 78 0.0017 30.5 9.6 135 44-188 568-717 (1001)
391 COG1377 FlhB Flagellar biosynt 61.4 13 0.00027 32.9 4.1 17 172-188 300-316 (363)
392 TIGR00649 MG423 conserved hypo 61.0 1.1E+02 0.0024 27.4 10.3 109 76-191 286-415 (422)
393 KOG1360|consensus 60.5 1.3E+02 0.0029 27.3 10.9 76 101-187 255-339 (570)
394 PF13684 Dak1_2: Dihydroxyacet 57.1 56 0.0012 28.2 7.4 67 117-188 109-177 (313)
395 COG0031 CysK Cysteine synthase 56.7 62 0.0014 27.9 7.5 56 73-133 59-116 (300)
396 PRK13109 flhB flagellar biosyn 55.8 17 0.00037 32.1 4.1 16 172-187 302-317 (358)
397 KOG3843|consensus 55.4 1.3E+02 0.0029 25.7 10.2 108 81-193 79-197 (432)
398 KOG2467|consensus 54.2 86 0.0019 28.1 7.9 126 53-191 87-225 (477)
399 PRK06298 type III secretion sy 53.9 19 0.00041 31.8 4.0 16 172-187 294-309 (356)
400 PRK12721 secretion system appa 53.6 19 0.00041 31.7 3.9 16 172-187 293-308 (349)
401 TIGR01404 FlhB_rel_III type II 53.1 15 0.00033 32.2 3.3 16 172-187 292-307 (342)
402 PRK12468 flhB flagellar biosyn 52.8 20 0.00044 32.0 4.0 16 172-187 300-315 (386)
403 TIGR01319 glmL_fam conserved h 50.2 1.3E+02 0.0028 27.6 8.8 113 80-212 63-204 (463)
404 PRK08156 type III secretion sy 49.7 24 0.00053 31.2 4.0 16 172-187 288-303 (361)
405 PRK12772 bifunctional flagella 45.2 28 0.00061 33.0 4.0 16 172-187 556-571 (609)
406 COG4821 Uncharacterized protei 44.6 46 0.001 27.1 4.5 33 154-186 103-136 (243)
407 KOG1358|consensus 44.5 2.4E+02 0.0053 25.5 9.9 161 5-193 92-273 (467)
408 PRK09108 type III secretion sy 43.9 37 0.00079 30.0 4.2 16 172-187 295-310 (353)
409 TIGR02998 RraA_entero regulato 43.3 25 0.00053 27.4 2.8 78 103-188 13-94 (161)
410 KOG1402|consensus 42.4 41 0.00088 29.6 4.1 48 142-195 195-253 (427)
411 TIGR00328 flhB flagellar biosy 40.7 48 0.001 29.2 4.5 16 172-187 293-308 (347)
412 COG4152 ABC-type uncharacteriz 40.0 2.2E+02 0.0048 24.3 7.9 115 54-206 105-220 (300)
413 KOG3851|consensus 39.6 19 0.00041 31.6 1.7 45 80-125 42-87 (446)
414 KOG2865|consensus 37.2 1.6E+02 0.0035 25.6 6.9 87 82-182 65-169 (391)
415 PF11149 DUF2924: Protein of u 35.4 44 0.00095 25.3 2.9 30 178-208 94-123 (136)
416 PRK12773 flhB flagellar biosyn 35.2 35 0.00076 32.4 2.8 16 172-187 592-607 (646)
417 PF02662 FlpD: Methyl-viologen 34.1 1.9E+02 0.0041 21.2 8.6 97 106-212 2-118 (124)
418 TIGR02990 ectoine_eutA ectoine 33.9 2.7E+02 0.0059 23.0 8.4 84 102-187 119-212 (239)
419 PF01312 Bac_export_2: FlhB Hr 33.8 19 0.0004 31.6 0.8 26 172-210 295-320 (343)
420 TIGR01226 phe_am_lyase phenyla 33.0 3E+02 0.0066 26.6 8.7 94 24-128 126-221 (680)
421 PHA02678 hypothetical protein; 32.5 1.3E+02 0.0029 20.8 4.6 77 103-198 5-87 (89)
422 KOG1209|consensus 31.6 3.1E+02 0.0067 22.9 8.3 83 80-168 10-92 (289)
423 PRK05702 flhB flagellar biosyn 31.5 69 0.0015 28.3 4.0 16 172-187 300-315 (359)
424 PRK12566 glycine dehydrogenase 30.2 5E+02 0.011 26.3 9.9 95 11-123 83-188 (954)
425 PRK08638 threonine dehydratase 29.9 3.7E+02 0.008 23.3 9.0 49 81-131 79-127 (333)
426 PRK00366 ispG 4-hydroxy-3-meth 29.7 83 0.0018 27.8 4.1 85 127-214 26-126 (360)
427 cd01132 F1_ATPase_alpha F1 ATP 29.4 3.1E+02 0.0067 23.3 7.4 59 142-212 111-182 (274)
428 PF03460 NIR_SIR_ferr: Nitrite 29.4 33 0.00071 22.1 1.3 38 172-209 28-68 (69)
429 KOG2018|consensus 28.9 4.1E+02 0.0088 23.5 9.0 41 172-212 181-230 (430)
430 TIGR00789 flhB_rel flhB C-term 28.6 62 0.0013 22.2 2.6 17 172-188 31-47 (82)
431 PLN02970 serine racemase 28.0 3.9E+02 0.0085 23.0 9.5 49 82-132 80-128 (328)
432 TIGR01935 NOT-MenG RraA famliy 27.7 48 0.0011 25.4 2.1 78 103-188 9-90 (150)
433 PLN02457 phenylalanine ammonia 26.8 5.6E+02 0.012 25.0 9.4 97 21-128 137-235 (706)
434 TIGR03573 WbuX N-acetyl sugar 26.7 4.3E+02 0.0093 23.0 9.4 128 50-199 39-181 (343)
435 PF15608 PELOTA_1: PELOTA RNA 26.3 1.6E+02 0.0035 21.0 4.4 48 144-194 46-93 (100)
436 TIGR03599 YloV DAK2 domain fus 25.7 4E+02 0.0086 25.0 8.1 97 106-213 317-425 (530)
437 PF10417 1-cysPrx_C: C-termina 25.5 32 0.0007 20.0 0.6 14 100-113 16-29 (40)
438 COG1658 Small primase-like pro 24.4 3E+02 0.0066 20.5 6.1 60 142-213 20-81 (127)
439 KOG2741|consensus 24.3 2E+02 0.0043 25.4 5.5 71 110-187 58-129 (351)
440 cd01017 AdcA Metal binding pro 24.1 1.8E+02 0.004 24.3 5.2 74 102-184 170-246 (282)
441 PF01248 Ribosomal_L7Ae: Ribos 23.6 2.4E+02 0.0053 19.1 5.1 44 142-187 19-64 (95)
442 COG1105 FruK Fructose-1-phosph 23.0 1.1E+02 0.0024 26.5 3.6 44 142-187 115-165 (310)
443 COG0396 sufC Cysteine desulfur 23.0 3.4E+02 0.0073 22.8 6.2 69 118-194 154-227 (251)
444 PF04273 DUF442: Putative phos 22.9 1.7E+02 0.0037 21.1 4.1 56 103-160 28-91 (110)
445 KOG2550|consensus 22.1 4.7E+02 0.01 23.9 7.4 115 84-208 246-374 (503)
446 PF05368 NmrA: NmrA-like famil 21.4 4.1E+02 0.009 21.0 9.3 90 84-187 4-102 (233)
447 PF13941 MutL: MutL protein 20.7 6.7E+02 0.014 23.1 8.5 39 172-212 169-208 (457)
448 COG3453 Uncharacterized protei 20.6 2.3E+02 0.005 21.1 4.3 50 108-159 42-91 (130)
449 TIGR00093 pseudouridine syntha 20.5 47 0.001 24.4 0.8 34 168-201 84-119 (128)
450 KOG3074|consensus 20.4 68 0.0015 26.6 1.7 18 47-64 148-165 (263)
451 TIGR02026 BchE magnesium-proto 20.1 2.6E+02 0.0057 25.7 5.8 16 172-187 81-98 (497)
452 PRK07476 eutB threonine dehydr 20.1 5.5E+02 0.012 21.9 9.8 49 82-132 72-120 (322)
No 1
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-41 Score=289.41 Aligned_cols=201 Identities=38% Similarity=0.630 Sum_probs=188.5
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccC
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSG 86 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~ 86 (218)
...|||+||+|+|++|++|++++|++|.+.+.++ ...+.|.|+.|+++|++++++.+|| .+.+.+..+|+..++|+||
T Consensus 26 ~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~-~~~k~Yl~i~G~~~f~~~~~~llFG-~d~~~l~~~Rv~t~Qt~GG 103 (396)
T COG1448 26 PNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQ-EKTKNYLPIEGLPEFLEAVQKLLFG-ADSPALAEDRVATVQTLGG 103 (396)
T ss_pred cCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhcc-ccccccCCcCCcHHHHHHHHHHhcC-CCcHHHHhhhHhheecCCc
Confidence 3789999999999999999999999999998866 4678999999999999999999999 9888788899999999999
Q ss_pred hhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCC
Q psy6266 87 TGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAH 166 (218)
Q Consensus 87 ~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~ 166 (218)
|||+++++.++....|...||+++|+|++|.++|+.+|+ ++..||+|+.+...+||+.|.++|++++++++++++.|||
T Consensus 104 TGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl-~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~vvLLH~CcH 182 (396)
T COG1448 104 TGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGL-EVETYPYYDAETKGLDFDGMLADLKTAPEGSVVLLHGCCH 182 (396)
T ss_pred chHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCC-ceeeeeccccccccccHHHHHHHHHhCCCCCEEEEecCCC
Confidence 999999999998877888899999999999999999999 9999999999888999999999999998999999999999
Q ss_pred CCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCCHHHHHHHHHHHHHc
Q psy6266 167 NPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDAVTS 213 (218)
Q Consensus 167 NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ni~~~~~a~~~~~~~ 213 (218)
||||. +|.++.+++++..+.| ++|.||..+ ++.+|++++..+..
T Consensus 183 NPTG~D~t~~qW~~l~~~~~~r~lip~~D--~AYQGF~~G-leeDa~~lR~~a~~ 234 (396)
T COG1448 183 NPTGIDPTEEQWQELADLIKERGLIPFFD--IAYQGFADG-LEEDAYALRLFAEV 234 (396)
T ss_pred CCCCCCCCHHHHHHHHHHHHHcCCeeeee--hhhhhhccc-hHHHHHHHHHHHHh
Confidence 99997 6888899999999999 999999888 99999999988653
No 2
>KOG1412|consensus
Probab=100.00 E-value=1.2e-37 Score=258.25 Aligned_cols=202 Identities=50% Similarity=0.876 Sum_probs=190.1
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccCh
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGT 87 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~ 87 (218)
..+||++|.||+++|+||+.|.|+++...+.++...+|+|.|..|++.|+++.++.++| .+.+.+.++|+..+++.+|+
T Consensus 31 ~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~el~lg-~~s~a~kE~Rv~~vQslsGT 109 (410)
T KOG1412|consen 31 VKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATELLLG-ADSPAIKEDRVFGVQSLSGT 109 (410)
T ss_pred ceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhHHHhcC-CCchhhhhccccceeecccc
Confidence 46899999999999999999999999888876645679999999999999999999999 99988999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCC
Q psy6266 88 GALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHN 167 (218)
Q Consensus 88 ~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~N 167 (218)
||+++++.++.++.+-..|++++|+|++|..+++.+|++++..|++|+.+..++|++.+..+|+.++++++++++.|.||
T Consensus 110 GAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhN 189 (410)
T KOG1412|consen 110 GALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHN 189 (410)
T ss_pred chhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccC
Confidence 99999999998877789999999999999999999998789999999999899999999999999999999999999999
Q ss_pred CcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCCHHHHHHHHHHHHH
Q psy6266 168 PTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDAVT 212 (218)
Q Consensus 168 PTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ni~~~~~a~~~~~~ 212 (218)
|||. ||++..++++++.+.| ++|.|+..+++|.+|||++..|.
T Consensus 190 PTGmDPT~EQW~qia~vik~k~lf~fFD--iAYQGfASGD~~~DawAiR~fV~ 240 (410)
T KOG1412|consen 190 PTGMDPTREQWKQIADVIKSKNLFPFFD--IAYQGFASGDLDADAWAIRYFVE 240 (410)
T ss_pred CCCCCCCHHHHHHHHHHHHhcCceeeee--hhhcccccCCccccHHHHHHHHh
Confidence 9997 7888889999999999 99999999999999999999886
No 3
>KOG1411|consensus
Probab=100.00 E-value=5.4e-37 Score=257.36 Aligned_cols=200 Identities=45% Similarity=0.773 Sum_probs=187.9
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccCh
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGT 87 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~ 87 (218)
..|||++|.|||++|+|.++++|++|.++++.. ....+|.|+.|+++|++..+++.+| .+.+.+.++||..++|.+|+
T Consensus 53 ~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~-~ldKEYlpI~Gl~eF~k~sakLa~G-~~s~~ik~~Ri~tvQ~lSGT 130 (427)
T KOG1411|consen 53 KKINLGVGAYRDDNGKPYVLPSVRKAEQQLASL-SLDKEYLPITGLAEFNKLSAKLALG-DNSPVIKEKRIVTVQTLSGT 130 (427)
T ss_pred ceeeecccceecCCCCeeeeHHHHHHHHHHhhh-cccchhccccchHHHHHHHHHHhhc-CCchhhhccceeEEEeccCc
Confidence 467999999999999999999999999988763 5678999999999999999999999 99988999999999999999
Q ss_pred hHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCC
Q psy6266 88 GALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHN 167 (218)
Q Consensus 88 ~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~N 167 (218)
||+++++.+|.+..|+..|++|+|+|+||..+++.+|+ .+..|.++.....++|++.+.++|.+.+++++++++.|+||
T Consensus 131 GaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~-~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ilLhaCaHN 209 (427)
T KOG1411|consen 131 GALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGL-PVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSIILLHACAHN 209 (427)
T ss_pred chhhHHHHHHHhhccccceeecCCcccccCccccccCc-ceeeeeeccccccccchHHHHHHHhcCCCCcEEEeehhhcC
Confidence 99999999998888999999999999999999999999 89999999888899999999999999889999999999999
Q ss_pred CcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCCHHHHHHHHHHHHH
Q psy6266 168 PTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDAVT 212 (218)
Q Consensus 168 PTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ni~~~~~a~~~~~~ 212 (218)
|||. +|.++.++++.+.+.| ++|.||..+++|.+|++++-.+.
T Consensus 210 PTGvDPt~eqw~ki~~~~~~k~~~pffD--mAYQGfaSG~~d~DA~avR~F~~ 260 (427)
T KOG1411|consen 210 PTGVDPTKEQWEKISDLIKEKNLLPFFD--MAYQGFASGDLDKDAQAVRLFVE 260 (427)
T ss_pred CCCCCccHHHHHHHHHHhhhccccchhh--hhhcccccCCchhhHHHHHHHHH
Confidence 9997 5778889999999999 99999999999999999987765
No 4
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=8.7e-36 Score=263.19 Aligned_cols=176 Identities=12% Similarity=0.042 Sum_probs=152.8
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccC
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSG 86 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~ 86 (218)
+++|||++|. +++++|+++++|+.+++.+ +.. +|+|+.|+++||+++++++.+ +++..+++++ .+++|.|+
T Consensus 28 ~~vi~l~iG~-----Pd~~~p~~i~~a~~~a~~~-~~~-~Y~~~~G~~~LReaia~~~~~-~~~~~~~~~~-eiivt~Ga 98 (393)
T COG0436 28 EDVIDLSIGE-----PDFPTPEHIIEAAIEALEE-GGT-HYTPSAGIPELREAIAEKYKR-RYGLDVDPEE-EIIVTAGA 98 (393)
T ss_pred CCEEEeCCCC-----CCCCCCHHHHHHHHHHHhc-ccC-CCCCCCCCHHHHHHHHHHHHH-HhCCCCCCCC-eEEEeCCH
Confidence 5799999994 4668999999998887754 223 788999999999999999987 7765566665 13699999
Q ss_pred hhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCC-cCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 87 TGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP-EKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 87 ~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
++|+.++++++ ++|||+|++|+|+|++|..+++++|+ +++.+++... +.+.+|++.+++++. +++++++.|+|
T Consensus 99 ~~al~~~~~a~--~~pGDeVlip~P~Y~~y~~~~~~~gg-~~v~v~l~~~~~~f~~d~~~l~~~i~---~ktk~i~ln~P 172 (393)
T COG0436 99 KEALFLAFLAL--LNPGDEVLIPDPGYPSYEAAVKLAGG-KPVPVPLDEEENGFKPDLEDLEAAIT---PKTKAIILNSP 172 (393)
T ss_pred HHHHHHHHHHh--cCCCCEEEEeCCCCcCHHHHHHhcCC-EEEEEeCCcCccCCcCCHHHHHhhcC---ccceEEEEeCC
Confidence 99999999988 89999999999999999999999999 9999987433 368889999998885 46777888999
Q ss_pred CCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 166 HNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 166 ~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
|||||. +|+++|++|++|||+| |+|++|.|+.
T Consensus 173 ~NPTGav~~~~~l~~i~~~a~~~~i~ii~D--EiY~~l~yd~ 212 (393)
T COG0436 173 NNPTGAVYSKEELKAIVELAREHDIIIISD--EIYEELVYDG 212 (393)
T ss_pred CCCcCcCCCHHHHHHHHHHHHHcCeEEEEe--hhhhhcccCC
Confidence 999998 7999999999999999 9999999985
No 5
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=4.1e-33 Score=246.42 Aligned_cols=187 Identities=36% Similarity=0.641 Sum_probs=158.6
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccC
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSG 86 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~ 86 (218)
..+|||++|.+.+++++++..+.+++|..++.++ +...+|.+..|.++||+++++++.+ .++..+++++|.+++|.|+
T Consensus 26 ~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~-~~~~~Y~~~~G~~~lR~aia~~~~~-~~~~~~~~~~i~v~iT~Ga 103 (396)
T PRK09257 26 PDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLET-ETTKNYLPIEGLAAYRQAVQELLFG-ADSPALAAGRVATVQTPGG 103 (396)
T ss_pred cCcEecceeeEECCCCCEeccHHHHHHHHHhccc-ccCCCcCCCCCCHHHHHHHHHHhcC-CCCcccccCeEEEEecCCc
Confidence 3689999999877777666568999998887643 2455799999999999999999987 7655456777656799999
Q ss_pred hhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCC
Q psy6266 87 TGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAH 166 (218)
Q Consensus 87 ~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~ 166 (218)
++|+.++++++..++|||+|++++|+|+.|..+++..|+ +++.+|+...+.+++|++.+++.+.+..++++++++++||
T Consensus 104 ~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~-~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~ 182 (396)
T PRK09257 104 TGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGL-EVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCH 182 (396)
T ss_pred cHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCC-cEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCC
Confidence 999999988765468999999999999999999999999 9999998544457899999999887544556788889999
Q ss_pred CCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 167 NPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 167 NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
||||. +|+++|++|+++||+| ++|.++.++
T Consensus 183 NPTG~~~s~~~~~~l~~~a~~~~~~ii~D--e~Y~~l~~~ 220 (396)
T PRK09257 183 NPTGADLTPEQWDELAELLKERGLIPFLD--IAYQGFGDG 220 (396)
T ss_pred CCCCCCCCHHHHHHHHHHHHhCCcEEEEe--ccccccccc
Confidence 99997 7899999999999999 999999864
No 6
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.7e-32 Score=241.06 Aligned_cols=189 Identities=46% Similarity=0.771 Sum_probs=157.4
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccC
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSG 86 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~ 86 (218)
.++|||++|.+.+++++..+.+.+++|..++... ...++|+|+.|+++||+++++++.+ .++..+++++|...+|.|+
T Consensus 29 ~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~-~~~~~Y~~~~G~~~lR~aia~~~~~-~~~~~~~~~~v~~~~t~G~ 106 (404)
T PTZ00376 29 PSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEK-NLDKEYLPIEGLQSFIEAAQKLLFG-EASYALAEKRIATVQALSG 106 (404)
T ss_pred cccEecccceeECCCCCEehhhHHHHHHHHhccc-cCCCCCCCCCCCHHHHHHHHHHhcC-CCccccccCeEEEeeccCc
Confidence 5789999999876777666677888887665532 3457899999999999999999987 6655567777754579999
Q ss_pred hhHHHHHHHHHHH-hcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 87 TGALRVGAEFLHR-ILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 87 ~~al~~~~~~l~~-l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
++|+.++++++.. ++|||+|++++|+|+.|..+++..|+ +++.+|+..++.+++|++.+++.+++.++++.++++++|
T Consensus 107 ~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~-~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p 185 (404)
T PTZ00376 107 TGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGL-NVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACA 185 (404)
T ss_pred chHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCC-ceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCC
Confidence 9999998765432 58999999999999999999999999 999999854445789999999998754345677888999
Q ss_pred CCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCCH
Q psy6266 166 HNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQNL 200 (218)
Q Consensus 166 ~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ni 200 (218)
|||||. +|+++|++|+++||+| ++|.++.++..
T Consensus 186 ~NPTG~~~s~~~~~~l~~~a~~~~~~ii~D--e~Y~~~~~~~~ 226 (404)
T PTZ00376 186 HNPTGVDPTEEQWKEIADVMKRKNLIPFFD--MAYQGFASGDL 226 (404)
T ss_pred CCCCCCCCCHHHHHHHHHHHHhCCcEEEEe--hhhcCccCCCH
Confidence 999997 7889999999999999 99999999754
No 7
>PLN02397 aspartate transaminase
Probab=100.00 E-value=1.2e-31 Score=239.13 Aligned_cols=189 Identities=44% Similarity=0.747 Sum_probs=155.9
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEecc
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLS 85 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G 85 (218)
+..+|||++|.+.++++.++..+.++++...++.. +..++|+|+.|+++||+++++++++ .+.....+++|...++.+
T Consensus 47 ~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~-~~~~~Y~~~~G~~~LR~aia~~~~~-~~~~~~~~~~i~~~~i~~ 124 (423)
T PLN02397 47 SPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAG-SRNKEYLPIEGLAEFNKLSAKLAYG-ADSPAIKENRVATVQCLS 124 (423)
T ss_pred CcceEecccceeeCCCCCcccchHHHHHHHHhhcc-CCCCCCCCcCCCHHHHHHHHHHHcC-CCCchhhcCeeEeeeccc
Confidence 45789999999888888777889999988776533 3455899999999999999999987 665444445564456778
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
++|+..+++.++..++|||+|++++|+|++|..+++..|+ +++.+++...+.+++|++.+.+.+++.+++++++++++|
T Consensus 125 g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~-~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P 203 (423)
T PLN02397 125 GTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGV-PVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACA 203 (423)
T ss_pred chHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCC-eEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCC
Confidence 7788766665555467999999999999999999999999 999998854445788999999888754456788888999
Q ss_pred CCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 166 HNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 166 ~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
|||||. +|+++|++|+++||+| ++|.+|.+++
T Consensus 204 ~NPTG~v~s~e~l~~i~~~a~~~~~~vI~D--e~Y~~l~~~~ 243 (423)
T PLN02397 204 HNPTGVDPTPEQWEQISDLIKSKNHLPFFD--SAYQGFASGD 243 (423)
T ss_pred CCCCCCCCCHHHHHHHHHHHHhCCcEEEEe--cccCCccCCc
Confidence 999997 7889999999999999 9999999875
No 8
>KOG0257|consensus
Probab=99.97 E-value=1.4e-31 Score=230.12 Aligned_cols=179 Identities=15% Similarity=0.073 Sum_probs=150.9
Q ss_pred ceee-eeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCC-CceEEEEecc
Q psy6266 8 IHCC-EIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLRE-GRAFGVQTLS 85 (218)
Q Consensus 8 ~~i~-l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~-~~v~~~~t~G 85 (218)
.+.+ |++|. +++++|+.|.+|++.++.+ ...++|++..|+|+||+++++.+.. .++....+ ++| +||.|
T Consensus 31 ~~~~~LgqGf-----p~~~~P~fv~ea~~~~~~~-~~~~qYt~~~G~p~L~~aL~k~~se-~~~~~~~~~~eV--lVT~G 101 (420)
T KOG0257|consen 31 KVPNPLGQGF-----PDFPPPKFVTEAAKNAAKE-PSTNQYTRGYGLPQLRKALAKAYSE-FYGGLLDPDDEV--LVTAG 101 (420)
T ss_pred CCCCcccCCC-----CCCCCcHHHHHHHHHHhcc-chhccccccCCchHHHHHHHHHHHH-HhccccCCcccE--EEecC
Confidence 3445 99994 4668899999999998876 3578999999999999999998854 34433444 444 69999
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEecc------CCcCccccHHHHHHHHhcCCCCcEE
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYW------NPEKRAVDFTGMYEDLVNAPDNSVI 159 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~------~~~~~~~d~~~~~~~l~~~~~~~~i 159 (218)
+.+++..+++.+ +++||+|++.+|+|++|...++++|+ +++.++.. ..+.+.+|++.++.++. +++.+
T Consensus 102 A~~ai~~~~~~l--~~~GDeVii~eP~fd~Y~~~~~maG~-tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t---~kTk~ 175 (420)
T KOG0257|consen 102 ANEAISSALLGL--LNPGDEVIVFEPFFDCYIPQVVMAGG-TPVFVPLKPKEGNVSSSDWTLDPEELESKIT---EKTKA 175 (420)
T ss_pred chHHHHHHHHHH--cCCCCEEEEecCcchhhhhHHhhcCC-cceeeccccccccccCccccCChHHHHhhcc---CCccE
Confidence 999999888887 89999999999999999999999999 89999885 34567779999988885 56777
Q ss_pred EEcccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCCHHHH
Q psy6266 160 ILHACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQNLDHV 203 (218)
Q Consensus 160 il~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ni~~~ 203 (218)
|+.|+||||||. +|+++|++|++++|+| ++|+.+.|+.-+.+
T Consensus 176 Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisD--evYe~~v~d~~~h~ 225 (420)
T KOG0257|consen 176 IILNTPHNPTGKVFSREELERIAELCKKHGLLVISD--EVYEWLVYDGNKHI 225 (420)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEh--hHhHHHhhCCCcce
Confidence 888999999998 7999999999999999 99999998864443
No 9
>PLN02368 alanine transaminase
Probab=99.97 E-value=5.7e-30 Score=227.26 Aligned_cols=184 Identities=12% Similarity=0.038 Sum_probs=148.6
Q ss_pred CCCceeeeeeeEEeCCCCC------c----------------------cCchHHHHHHHHHhhcCCCCccCcCCCCcHHH
Q psy6266 5 SGEIHCCEIRNAYRTEECK------P----------------------WVLPVVRQAEKELAADDSLNHEYLPVLGLESF 56 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~------~----------------------~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~l 56 (218)
.|.++|+|++|.+ |.. + .+++.+++|.+.+....+..++|+++.|+++|
T Consensus 36 ~g~~vi~l~iG~P---d~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~L 112 (407)
T PLN02368 36 EGKKIIFTNVGNP---HALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKHYLSLTSGGLGAYSDSRGLPGV 112 (407)
T ss_pred HhhhhhcccCCCh---hHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHHHHHhcCCCCCCCCCCCCCCHHH
Confidence 5889999999974 321 2 26778888766543221235689999999999
Q ss_pred HHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHh-cCCCeEEecCCCchhHHHHHHHhCCCcceeEeccC
Q psy6266 57 SSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRI-LNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWN 135 (218)
Q Consensus 57 r~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l-~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~ 135 (218)
|+++++++.+ .++..+++++| ++|.|+++++.++++++ + +|||+|++++|+|+.|..+++..|+ +++.+++..
T Consensus 113 R~aia~~~~~-~~g~~~~~~~I--~it~Ga~~al~~~~~~l--~~~pGd~Vli~~P~Y~~y~~~~~~~g~-~~v~v~~~~ 186 (407)
T PLN02368 113 RKEVAEFIER-RDGYPSDPELI--FLTDGASKGVMQILNAV--IRGEKDGVLVPVPQYPLYSATISLLGG-TLVPYYLEE 186 (407)
T ss_pred HHHHHHHHHH-hcCCCCChhhE--EEcccHHHHHHHHHHHH--cCCCCCEEEEeCCCCccHHHHHHHcCC-EEEEEeccc
Confidence 9999999976 54545677776 59999999999998876 5 6999999999999999999999999 999999854
Q ss_pred CcCccccHHHHHHHHhcC---CCCcEEEEcccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 136 PEKRAVDFTGMYEDLVNA---PDNSVIILHACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 136 ~~~~~~d~~~~~~~l~~~---~~~~~iil~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
++.+++|++.+++.++.. ..++.+++.++||||||. +|.++|++|+++||+| |+|.+++|++
T Consensus 187 ~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~D--E~Y~~l~y~~ 259 (407)
T PLN02368 187 SENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGD--EVYQQNIYQD 259 (407)
T ss_pred ccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEE--ccccccccCC
Confidence 445788999999988642 114555666789999998 7889999999999999 9999999864
No 10
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.96 E-value=5.9e-29 Score=220.96 Aligned_cols=183 Identities=13% Similarity=0.072 Sum_probs=150.6
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
.+|.++|+|++|.+ |+.+.+++++.+++|..+.++. ....+|.|..|.++||+++++++.+ .++..+++++| ++|
T Consensus 29 ~~~~~~i~l~~G~p-~~~~~~~~p~~~~~a~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~~~~-~~g~~~~~~~I--~it 103 (409)
T PLN00143 29 DDHRLAISFGFGDP-SCFECFRTTNIAEDAIVEAVRS-AKFNSYAPTGGILPARRAIADYLSN-DLPYQLSPDDV--YLT 103 (409)
T ss_pred CCCCceeeCCCCCC-CCCCCCCCCHHHHHHHHHHHhC-cCCCCCCCCCCCHHHHHHHHHHHHh-hcCCCCCHhhE--EEe
Confidence 36789999999963 2225578899999998877754 2346799999999999999999976 65555777776 599
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcc
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~ 163 (218)
.|+++++.++++++ ++|||+|++++|+|+.|...++..|+ +++.+++..++.+.+|++.+++.+. +++.+++.+
T Consensus 104 ~G~~~al~~~~~~l--~~~gd~v~v~~P~y~~~~~~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~~~~~ 177 (409)
T PLN00143 104 LGCKHAAEIIIKVL--ARPEANILLPRPGFPDVETYAIFHHL-EIRHFDLLPEKGWEVDLDAVEAIAD---ENTIAMVII 177 (409)
T ss_pred cChHHHHHHHHHHH--cCCCCEEEEcCCCCcCHHHHHHHcCC-EEEEEeccCCCCCcCCHHHHHHhcc---cCCEEEEEE
Confidence 99999999999887 68999999999999999999999999 8999887434456789999987664 234445556
Q ss_pred cCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 164 CAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 164 ~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
+||||||. +|.++|++|+++||+| ++|.++.+++
T Consensus 178 nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~D--e~Y~~l~~~~ 219 (409)
T PLN00143 178 NPGNPCGSVYSYEHLNKIAETARKLGILVIAD--EVYGHIVFGS 219 (409)
T ss_pred CCCCCCCCccCHHHHHHHHHHHHHcCCeEEEE--ccccccccCC
Confidence 89999998 6889999999999999 9999998864
No 11
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.96 E-value=9.4e-29 Score=225.70 Aligned_cols=180 Identities=13% Similarity=0.056 Sum_probs=148.5
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|.++|+|++|.+ ++.+ +++|+.+.++..+.+.. .++|++..|+++||+++++++.. +++..+++++| ++|
T Consensus 143 ~~g~~~i~l~~G~p-~~~~-~~~p~~~~~~~~~~~~~---~~~Y~~~~G~~~lReaia~~~~~-~~~~~~~~~~I--~it 214 (517)
T PRK13355 143 AAGTHILKLNIGNP-APFG-FRTPDEVVYDMAQQLTD---TEGYSDSKGLFSARKAIMQYAQL-KGLPNVDVDDI--YTG 214 (517)
T ss_pred HcCCCeEEecCcCC-CcCC-CCCCHHHHHHHHHHhhc---CCCCCCCcChHHHHHHHHHHHHh-cCCCCCChhHE--EEe
Confidence 36889999999963 1212 56788888887766532 45799999999999999999965 55544677776 599
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcc
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~ 163 (218)
.|+++++.++++++ ++|||+|++++|+|+.|...+++.|+ +++.+++..++.+.+|++.+++.+. +++.+++.+
T Consensus 215 ~G~~eal~~~~~~l--~~~Gd~Vli~~P~y~~y~~~~~~~g~-~~v~~~~~~~~~~~~d~~~l~~~~~---~~~k~i~i~ 288 (517)
T PRK13355 215 NGVSELINLSMSAL--LDDGDEVLIPSPDYPLWTACVNLAGG-TAVHYRCDEQSEWYPDIDDIRSKIT---SRTKAIVII 288 (517)
T ss_pred CcHHHHHHHHHHHh--CCCCCEEEEcCCCCcCHHHHHHHCCC-EEEEeecCcccCCCCCHHHHHHhcC---cCceEEEEE
Confidence 99999999999887 78999999999999999999999999 9999987544457789999988774 345556567
Q ss_pred cCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 164 CAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 164 ~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
+||||||. +|+++|++|+++||+| |+|.+|.|++
T Consensus 289 nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~D--E~Y~~~~~~~ 330 (517)
T PRK13355 289 NPNNPTGALYPREVLQQIVDIAREHQLIIFSD--EIYDRLVMDG 330 (517)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEe--hhhhhhcCCC
Confidence 89999997 6889999999999999 9999998874
No 12
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.96 E-value=7.6e-29 Score=224.50 Aligned_cols=185 Identities=11% Similarity=0.007 Sum_probs=145.7
Q ss_pred CCCceeeeeeeEEeCCCCC------------ccC-------------chHHHHHHHHHhhc-CCCCccCcCCCCcHHHHH
Q psy6266 5 SGEIHCCEIRNAYRTEECK------------PWV-------------LPVVRQAEKELAAD-DSLNHEYLPVLGLESFSS 58 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~------------~~~-------------~~~v~~a~~~~~~~-~~~~~~Y~~~~G~~~lr~ 58 (218)
.|.+||+|++|.+.+- |+ +.+ |..+.++..++.+. ......|+++.|+++||+
T Consensus 44 ~~~~vi~~~~G~p~~~-~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~ 122 (481)
T PTZ00377 44 PFDSIVYCNIGNPQAL-GQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPADVVARAKEYLNAIGGGTGAYTDSAGYPFVRK 122 (481)
T ss_pred CcceeEEcCCCChhhc-CCCCchHHHHHHHHccChhhhcCccccccCCHHHHHHHHHHHHhCCCcccCcCcccCCHHHHH
Confidence 3589999999974210 00 222 44677766655543 123467999999999999
Q ss_pred HHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHh-cCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCc
Q psy6266 59 AATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRI-LNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPE 137 (218)
Q Consensus 59 aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l-~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~ 137 (218)
++++++.. .++..+++++| ++|.|+++++.++++++ + +|||+|++++|+|+.|..+++..|+ +++.+++..++
T Consensus 123 aia~~~~~-~~g~~~~~~~I--~it~Ga~~al~~~~~~l--~~~~gD~Vlv~~P~y~~y~~~~~~~g~-~~v~v~~~~~~ 196 (481)
T PTZ00377 123 AVAAFIER-RDGVPKDPSDI--FLTDGASSGIKLLLQLL--IGDPSDGVMIPIPQYPLYSAAITLLGG-KQVPYYLDEEK 196 (481)
T ss_pred HHHHHHHH-hcCCCCChhhE--EEcCCHHHHHHHHHHHh--ccCCCCEEEECCCCchhHHHHHHHcCC-EEEEEEecccc
Confidence 99999976 55555777876 59999999999999887 6 6999999999999999999999999 99999885445
Q ss_pred CccccHHHHHHHHhcC-C--CCcEEEEcccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 138 KRAVDFTGMYEDLVNA-P--DNSVIILHACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 138 ~~~~d~~~~~~~l~~~-~--~~~~iil~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
.+.+|++.+++.+... . .++.+++.++||||||. +|+++|++|+++||+| ++|.++.|+
T Consensus 197 ~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~D--e~Y~~l~~~ 266 (481)
T PTZ00377 197 GWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMAD--EVYQENIYD 266 (481)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEe--hhhHhhccC
Confidence 5788999999988642 0 13444444689999998 7889999999999999 999998884
No 13
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.96 E-value=3.2e-28 Score=217.63 Aligned_cols=181 Identities=15% Similarity=0.087 Sum_probs=149.9
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEecc
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLS 85 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G 85 (218)
|.++|+|++|.+ +.-+++++++.++++..++++. +....|.+..|+++||+++++++.. ..+..+++++| ++|.|
T Consensus 51 ~~~~i~l~~G~P-~~~~~~~~~~~~~~a~~~al~~-~~~~~Y~~~~G~~~lr~aia~~~~~-~~~~~~~~~~v--~it~G 125 (430)
T PLN00145 51 PRPVLPLGHGDP-SAFPCFRTAPEAEDAVAAALRS-GKYNSYSTCVGLLPARRAIAEYLSR-DLPYELSTDDI--YLTAG 125 (430)
T ss_pred CCCeeeCCCCCC-CCCCCCCCCHHHHHHHHHHHHc-CcCCCCCCCccCHHHHHHHHHHHhh-ccCCCCChhhE--EEeCC
Confidence 889999999953 1123467888999998877754 3345799999999999999999976 65555777776 59999
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
+++|+.+++.++ ++|||+|++++|+|+.|.......|+ +++.+++...+.+.+|++.+++.+. +++.+++.++|
T Consensus 126 ~~~al~l~~~~l--~~~Gd~Vlv~~P~y~~y~~~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~P 199 (430)
T PLN00145 126 CAQAIEIIMSVL--AQPGANILLPRPGYPLYEARAVFSGL-EVRHFDLLPERGWEVDLEGVEALAD---ENTVAMVIINP 199 (430)
T ss_pred HHHHHHHHHHHh--cCCCCEEEEcCCCCccHHHHHHHcCC-EEEEeeCCcccCCcCCHHHHHHHhC---cCceEEEEeCC
Confidence 999999999887 68999999999999999999999999 8999987544567789999987664 34455666789
Q ss_pred CCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 166 HNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 166 ~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
|||||. +|.++|++++++||+| ++|.++.|++
T Consensus 200 ~NPtG~v~~~~~l~~i~~~a~~~~i~ii~D--e~Y~~~~~~~ 239 (430)
T PLN00145 200 NNPCGSVYSYEHLAKIAETARKLGILVIAD--EVYDHLTFGS 239 (430)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHcCCEEEEe--ccchhhccCC
Confidence 999997 6888899999999999 9999998864
No 14
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.96 E-value=4.5e-28 Score=213.57 Aligned_cols=179 Identities=12% Similarity=0.088 Sum_probs=144.9
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCC-ceEEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG-RAFGVQ 82 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~-~v~~~~ 82 (218)
+.|..+|+|++|. +++++++.++++..+...+ ....+|.+..|.++||+++++++.. ..+..++++ +| ++
T Consensus 27 ~~~~~~i~l~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~~~~-~~g~~~~~~~~I--~i 97 (388)
T PRK07366 27 AAGKELIDLSLGS-----SDLPAPAHALEAIAQSLHD-PSTHGYLLFHGTLDFREAAAQWYEQ-RFGLAVDPETEV--LP 97 (388)
T ss_pred hcCCCeEEeCCCC-----CCCCCCHHHHHHHHHHHhC-cccCCCCCCCCCHHHHHHHHHHHHH-hhCCcCCCcCeE--EE
Confidence 3578899999995 3356688888888776643 2456799999999999999999965 555446676 45 59
Q ss_pred eccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEc
Q psy6266 83 TLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILH 162 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~ 162 (218)
|.|+++|+.++++++ ++|||+|++++|+|+.|...++..|+ +++.+++..++.+.+|++.+.+.+.. ++.+++.
T Consensus 98 t~Gs~~al~~~~~~l--~~~gd~Vlv~~P~y~~~~~~~~~~g~-~~~~v~~~~~~~~~~d~~~l~~~~~~---~~k~i~l 171 (388)
T PRK07366 98 LIGSQEGTAHLPLAV--LNPGDFALLLDPGYPSHAGGVYLAGG-QIYPMPLRAENDFLPVFADIPTEVLA---QARLMVL 171 (388)
T ss_pred CCCcHHHHHHHHHHh--CCCCCEEEEcCCCCcchHHHHHhcCC-EEEEEECCCccCCCCCHHHHHHhhcc---cceEEEE
Confidence 999999999999877 68999999999999999999999999 99999984333456688888776642 3344555
Q ss_pred ccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 163 ACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 163 ~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
++||||||. +|+++|++|+++||+| ++|.++.+++
T Consensus 172 ~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~D--e~Y~~~~~~~ 214 (388)
T PRK07366 172 SYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHD--FPYVDLVFDG 214 (388)
T ss_pred eCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEe--cchhhcccCC
Confidence 689999998 6888999999999999 9999998753
No 15
>PRK06855 aminotransferase; Validated
Probab=99.96 E-value=3.6e-28 Score=217.45 Aligned_cols=182 Identities=12% Similarity=0.095 Sum_probs=145.6
Q ss_pred CCCCceeeeeeeEEeCCCC-CccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEEC-KPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~-~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
..|.++|+|++|. +++ ++.+|+.++++..++..+ ....+|+|..|.++||+++++++.. .++..+++++| ++
T Consensus 29 ~~g~~~~~~~~G~---p~~~~~~~p~~~~~a~~~~~~~-~~~~~Y~~~~G~~~LReaia~~~~~-~~g~~~~~~~I--~i 101 (433)
T PRK06855 29 KLGVKITWENIGD---PIAKGEKIPDWMKEIVAELVMD-DKSYGYCPTKGVLETREFLAELNNK-RGGAQITPDDI--IF 101 (433)
T ss_pred hccccccccccCC---CcccCCCCCHHHHHHHHHHhhc-CCCCCCCCCCCCHHHHHHHHHHHHh-ccCCCCCHhHE--EE
Confidence 4578999999995 332 467899999988877643 3456899999999999999999966 55555777876 59
Q ss_pred eccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHH-HHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEE
Q psy6266 83 TLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLV-FLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIIL 161 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~-~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil 161 (218)
|.|+++|+.+++. + ++|||+|++++|+|+.|... ....|+ +++.+++...+.+.+|++.+++.+.+. ++..+++
T Consensus 102 t~G~~~al~~~~~-l--~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~-~~v~v~~~~~~~~~~d~~~l~~~~~~~-~~~~~i~ 176 (433)
T PRK06855 102 FNGLGDAIAKIYG-L--LRREARVIGPSPAYSTHSSAEAAHAGY-PPVTYRLDPENNWYPDLDDLENKVKYN-PSIAGIL 176 (433)
T ss_pred cCcHHHHHHHHHH-h--cCCCCeEEEeCCCCchHHHHHHHhcCC-eEEEEecccccCCCCCHHHHHHHHhcC-CCceEEE
Confidence 9999999998875 4 57999999999999999754 345587 888888743345678999999888642 2334455
Q ss_pred cccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 162 HACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 162 ~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
.++||||||. +|.++|++|+++||+| ++|.++.|++
T Consensus 177 l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~D--e~Y~~l~~~~ 220 (433)
T PRK06855 177 LINPDNPTGAVYPKEILREIVDIAREYDLFIICD--EIYNNIVYNG 220 (433)
T ss_pred EECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe--ccccccccCC
Confidence 5689999998 7889999999999999 9999998864
No 16
>PLN02187 rooty/superroot1
Probab=99.95 E-value=1.1e-27 Score=216.01 Aligned_cols=180 Identities=13% Similarity=0.094 Sum_probs=149.0
Q ss_pred CCCceeeeeeeEEeCCC--CCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 5 SGEIHCCEIRNAYRTEE--CKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~--~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
.+.++|+|++|. ++ +.+.+++.+.++..++++. +...+|.|..|.++||+++++++.. ..+..+++++| ++
T Consensus 64 ~~~~vi~l~~Gd---p~~~p~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lR~aiA~~~~~-~~~~~~~~~~I--~i 136 (462)
T PLN02187 64 VNKTILPLGHGD---PSVYPCFRTCIEAEDAVVDVLRS-GKGNSYGPGAGILPARRAVADYMNR-DLPHKLTPEDI--FL 136 (462)
T ss_pred CCCCeEECCCCC---CCCCCCCCCCHHHHHHHHHHHhC-CCCCCCCCCCChHHHHHHHHHHHHH-hcCCCCCcccE--EE
Confidence 466999999994 44 3356778888888777654 3456899999999999999999965 54445777876 59
Q ss_pred eccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEc
Q psy6266 83 TLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILH 162 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~ 162 (218)
|.|+++|+.++++++ ++|||+|++++|+|+.|...++..|+ +++.+++...+.+++|++.+++.+. +++.+++.
T Consensus 137 t~G~~~al~~~~~~l--~~pGd~Vlv~~P~y~~y~~~~~~~g~-~~~~~~l~~~~~~~~d~~~l~~~~~---~~~~~v~i 210 (462)
T PLN02187 137 TAGCNQGIEIVFESL--ARPNANILLPRPGFPHYDARAAYSGL-EVRKFDLLPEKEWEIDLEGIEAIAD---ENTVAMVV 210 (462)
T ss_pred eCCHHHHHHHHHHHh--cCCCCEEEEeCCCCccHHHHHHHcCC-EEEEEeCccccCCccCHHHHHHhcC---CCcEEEEE
Confidence 999999999999987 68999999999999999999999999 9999988544567889999987764 34555666
Q ss_pred ccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 163 ACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 163 ~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
++||||||. +|+++|++|+++||+| ++|.++.|++
T Consensus 211 ~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~D--E~Y~~l~f~~ 253 (462)
T PLN02187 211 INPNNPCGNVYSHDHLKKVAETARKLGIMVISD--EVYDRTIFGD 253 (462)
T ss_pred eCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEe--ccccccccCC
Confidence 789999997 6889999999999999 9999998863
No 17
>PLN02656 tyrosine transaminase
Probab=99.95 E-value=2.4e-27 Score=210.64 Aligned_cols=183 Identities=16% Similarity=0.107 Sum_probs=149.6
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
.+|.++|+|++|.+ +....+++++.++++..+++.+ ...++|+|..|.++||+++++++.. ..+..+++++| ++|
T Consensus 28 ~~~~~~i~l~~G~p-~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~-~~g~~~~~~~i--~~t 102 (409)
T PLN02656 28 ENGKRVISLGMGDP-TAYSCFHTTHVAQEAVVDALQS-NKFNGYAPTVGLPQARRAIAEYLSR-DLPYKLSLDDV--FIT 102 (409)
T ss_pred ccCCeeeecCCCCC-CcCCCCCCCHHHHHHHHHHHhc-CCCCCCCCCCCCHHHHHHHHHHHHH-hcCCCCCcccE--EEe
Confidence 37899999999963 1113468899999998887754 3456899999999999999999965 55545677775 599
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcc
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~ 163 (218)
.|+++|+.+++.++ ++|||+|++++|+|+.|....+..|+ +++.+++...+.+.+|++.+++.+.. ++.+++.+
T Consensus 103 ~G~~~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~g~-~~~~i~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~ 176 (409)
T PLN02656 103 SGCTQAIDVALSML--ARPGANILLPRPGFPIYELCAAFRHL-EVRYVDLLPEKGWEVDLDAVEALADQ---NTVALVII 176 (409)
T ss_pred CChHHHHHHHHHHH--hCCCCeEEEeCCCCCcHHHHHHHcCC-EEEEEeCCCcCCCCCCHHHHHHHhcc---CceEEEEE
Confidence 99999999998877 67999999999999999999999999 89999885344567899999887743 34455556
Q ss_pred cCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 164 CAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 164 ~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
+||||||. +|.++|++|+++||+| ++|.++.|++
T Consensus 177 ~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~D--e~y~~~~~~~ 218 (409)
T PLN02656 177 NPGNPCGNVYSYQHLKKIAETAEKLKILVIAD--EVYGHLAFGS 218 (409)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEe--hhhhhcccCC
Confidence 89999996 6889999999999999 9999998864
No 18
>PLN00175 aminotransferase family protein; Provisional
Probab=99.95 E-value=3.6e-27 Score=209.81 Aligned_cols=176 Identities=15% Similarity=0.069 Sum_probs=145.5
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCC-ceEEEEe
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG-RAFGVQT 83 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~-~v~~~~t 83 (218)
.+..+|||++|.+ + +++++.++++..+++++ ..++|.+..|.++||+++++++.. ..+..++++ +| ++|
T Consensus 52 ~~~~~i~l~~G~P---~--~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~Lr~aia~~~~~-~~g~~~~~~~~I--~vt 121 (413)
T PLN00175 52 IKHGAINLGQGFP---N--FDGPDFVKEAAIQAIRD--GKNQYARGFGVPELNSAIAERFKK-DTGLVVDPEKEV--TVT 121 (413)
T ss_pred hcCCeEecCCCCC---C--CCCCHHHHHHHHHHHhc--CCCCcCCCCCCHHHHHHHHHHHHH-HhCCCCCCCCCE--EEe
Confidence 3457899999963 3 45688899998887754 357899999999999999999965 545446665 45 589
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcc
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~ 163 (218)
.|+++|+.++++++ ++|||+|++++|+|+.|...++..|+ +++.+++.. +.+.+|++.+++.+.. ++.+++.+
T Consensus 122 ~G~~~al~~~~~~l--~~~gd~Vlv~~P~y~~~~~~~~~~g~-~~~~v~~~~-~~~~~~~~~l~~~~~~---~~k~i~i~ 194 (413)
T PLN00175 122 SGCTEAIAATILGL--INPGDEVILFAPFYDSYEATLSMAGA-KIKTVTLRP-PDFAVPEDELKAAFTS---KTRAILIN 194 (413)
T ss_pred CCHHHHHHHHHHHh--CCCCCEEEEeCCCchhHHHHHHHcCC-EEEEEECCc-ccCCCCHHHHHHhcCc---CceEEEec
Confidence 99999999988876 68999999999999999999999999 999999853 3467899999888753 34556668
Q ss_pred cCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 164 CAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 164 ~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
+||||||. +|.++|++|+++||+| ++|.++.++.
T Consensus 195 ~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~D--e~Y~~l~~~~ 236 (413)
T PLN00175 195 TPHNPTGKMFTREELELIASLCKENDVLAFTD--EVYDKLAFEG 236 (413)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEe--cccCccccCC
Confidence 99999998 6889999999999999 9999998763
No 19
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.95 E-value=3.4e-27 Score=208.62 Aligned_cols=176 Identities=14% Similarity=0.054 Sum_probs=144.6
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCC-cCCC-ceEEEE
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPP-LREG-RAFGVQ 82 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~-~~~~-~v~~~~ 82 (218)
.|..+|+|++|. +++++++.++++..+.+. ...+|.+..|.++||+++++++.. .++.. ++++ +| ++
T Consensus 27 ~~~~~i~l~~~~-----p~~~~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~-~~g~~~~~~~~~i--~i 95 (396)
T PRK09147 27 ADLPPISLSIGE-----PKHPTPAFIKDALAANLD---GLASYPTTAGLPALREAIAAWLER-RYGLPALDPATQV--LP 95 (396)
T ss_pred cCCCeEecCCCC-----CCCCCCHHHHHHHHHHhh---hhcCCCCCCCCHHHHHHHHHHHHH-HhCCCcCCccceE--EE
Confidence 588999999995 234568889988877653 356799999999999999999965 54444 5554 55 59
Q ss_pred eccChhHHHHHHHHHHHhcC---CCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEE
Q psy6266 83 TLSGTGALRVGAEFLHRILN---YTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVI 159 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~---gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i 159 (218)
|.|+++++.++++++ ++| ||+|++++|+|+.|..+++..|+ +++.+|+..++.+.+|++.+++.+.. +..+
T Consensus 96 t~G~~~al~~~~~~l--~~~~~~gd~vlv~~P~y~~~~~~~~~~g~-~~~~vp~~~~~~~~~d~~~l~~~~~~---~~k~ 169 (396)
T PRK09147 96 VNGSREALFAFAQTV--IDRDGPGPLVVCPNPFYQIYEGAALLAGA-EPYFLNCDPANNFAPDFDAVPAEVWA---RTQL 169 (396)
T ss_pred CCChHHHHHHHHHHH--cCCCCCCCEEEEcCCCccchHHHHHhcCC-EEEEeccCccccCccCHHHHHHHHhh---ccEE
Confidence 999999999999877 678 99999999999999999999999 99999985444567899999877742 3444
Q ss_pred EEcccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 160 ILHACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 160 il~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
++.++||||||. +|+++|++|+++||+| ++|..+.+++
T Consensus 170 i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~D--e~y~~~~~~~ 215 (396)
T PRK09147 170 LFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASD--ECYSEIYFDE 215 (396)
T ss_pred EEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEee--ccccccccCC
Confidence 555799999997 7889999999999999 9999988764
No 20
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.95 E-value=7.7e-27 Score=206.91 Aligned_cols=181 Identities=15% Similarity=0.140 Sum_probs=142.0
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCC-ceEEEEe
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG-RAFGVQT 83 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~-~v~~~~t 83 (218)
.|..+++|+.|. +++ ++++.+.++..+.... ....+|.+..|.++||+++++++.. ..+..++++ +| ++|
T Consensus 31 ~~~~~~~l~~g~---p~~--~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lR~~ia~~l~~-~~~~~~~~~~~I--~it 101 (403)
T PRK08636 31 AGEDIIDFSMGN---PDG--PTPQHIIDKLCESAQK-PKTHGYSVSKGIYKLRLAICNWYKR-KYNVDLDPETEV--VAT 101 (403)
T ss_pred cCCCEEEcCCcC---CCC--CCCHHHHHHHHHHhcC-CccCCCCCCCCCHHHHHHHHHHHHH-HhCCCCCCCCeE--EEC
Confidence 467899999995 444 3466666665554432 2357899999999999999999965 444445665 55 599
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHH----hcCCCCcEE
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDL----VNAPDNSVI 159 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l----~~~~~~~~i 159 (218)
.|+++|+.++++++ ++|||+|++++|+|+.|..+++..|+ +++.+++...+.+++|++.+.+.+ ++..++..+
T Consensus 102 ~G~~~al~~~~~~l--~~~gd~Vlv~~P~y~~~~~~~~~~g~-~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~ 178 (403)
T PRK08636 102 MGSKEGYVHLVQAI--TNPGDVAIVPDPAYPIHSQAFILAGG-NVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKY 178 (403)
T ss_pred CChHHHHHHHHHHh--CCCCCEEEEcCCCCcchHHHHHhcCC-EEEEEeccccccCccChhhhhhHHHHHHhhccCCceE
Confidence 99999999999987 68999999999999999999999999 999998732334688887654444 332345666
Q ss_pred EEcccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 160 ILHACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 160 il~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
++.++||||||. +|.++|++|+++||+| ++|..+.++.
T Consensus 179 i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~D--e~Y~~l~~~~ 224 (403)
T PRK08636 179 VVVNFPHNPTTATVEKSFYERLVALAKKERFYIISD--IAYADITFDG 224 (403)
T ss_pred EEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEe--ccchhhccCC
Confidence 666789999997 7899999999999999 9999988763
No 21
>PRK08637 hypothetical protein; Provisional
Probab=99.95 E-value=1.2e-26 Score=204.67 Aligned_cols=180 Identities=18% Similarity=0.249 Sum_probs=142.6
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCC---CceEEEEe
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLRE---GRAFGVQT 83 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~---~~v~~~~t 83 (218)
++.+|+++|.+.++.+ +.+.+.++++..+... ...++|++..|.++||+++++++.+ .+.. ..+ ++ +++|
T Consensus 3 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~Y~~~~G~~~lr~~ia~~~~~-~~~~-~~~~~~~~--I~it 75 (388)
T PRK08637 3 ATKYNATIGMATEKGG-PMYLSSLQDLLNDLTP--DEIFPYAPPQGIPELRDLWQEKMLR-ENPS-LSGKKMSL--PIVT 75 (388)
T ss_pred ccceecceeeEecCCC-cchHHHHHHHHHhhcc--ccccCCCCCCCCHHHHHHHHHHHhc-cCcc-ccccccce--eeEc
Confidence 4678999999966554 6778888887766432 3567899999999999999999876 5432 322 34 3699
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHH-HhCCCcceeEeccCCcCccccHHHHHHHHhcC-CCCcEEEE
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFL-NAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA-PDNSVIIL 161 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~-~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~iil 161 (218)
.|+++++.+++.++ ++|||+|++++|+|+.|...+. ..|+ +++.+|+.. +.+++|++.+++.++.. .+.+.+++
T Consensus 76 ~G~~~al~~~~~~l--~~~gd~Vlv~~P~y~~~~~~~~~~~g~-~vv~v~~~~-~~~~~d~~~l~~~~~~~~~~~~~~~~ 151 (388)
T PRK08637 76 NALTHGLSLVADLF--VDQGDTVLLPDHNWGNYKLTFNTRRGA-EIVTYPIFD-EDGGFDTDALKEALQAAYNKGKVIVI 151 (388)
T ss_pred cchHHHHHHHHHHh--cCCCCEEEEcCCCCccHHHHHHHhcCC-EEEEecccC-CCCcCCHHHHHHHHHhhccCCCEEEE
Confidence 99999999999887 6799999999999999998765 5798 899998842 34578999998888621 24456677
Q ss_pred cccCCCCcHH--------HHHHHhhc-----CeEEEeeCCceeeccCCCCC
Q psy6266 162 HACAHNPTAQ--------QVAHMVDK-----HHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 162 ~~~p~NPTG~--------~l~~l~~~-----~~i~ii~D~r~~y~~l~~~n 199 (218)
+++||||||. +|+++|++ |+++||+| ++|.++.|+.
T Consensus 152 ~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~D--e~Y~~l~~~~ 200 (388)
T PRK08637 152 LNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVD--DAYFGLFYED 200 (388)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEec--ccchhcccCC
Confidence 7899999997 67776653 89999999 9999998864
No 22
>PRK08068 transaminase; Reviewed
Probab=99.95 E-value=1.2e-26 Score=204.66 Aligned_cols=179 Identities=15% Similarity=0.147 Sum_probs=143.4
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCC-ceEEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG-RAFGVQ 82 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~-~v~~~~ 82 (218)
.+|.++|+|+.|. ++. ++++.++++..+.... ....+|.|..|.++||+++++++.. ..+..++++ +| ++
T Consensus 29 ~~~~~~i~l~~~~---p~~--~~~~~~~~~~~~~~~~-~~~~~Y~~~~g~~~lr~aia~~~~~-~~g~~~~~~~~i--~i 99 (389)
T PRK08068 29 AEGHDVINLGQGN---PDQ--PTPEHIVEALQEAAEN-PANHKYSPFRGYPFLKEAAADFYKR-EYGVTLDPETEV--AI 99 (389)
T ss_pred hcCCCeEEecCCC---CCC--CCCHHHHHHHHHHHhC-CCCCCCCCCCCCHHHHHHHHHHHHH-HhCCCCCCCccE--EE
Confidence 4677899999995 343 5567788887776643 2356899999999999999999864 444445666 55 59
Q ss_pred eccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEc
Q psy6266 83 TLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILH 162 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~ 162 (218)
|.|+++++.++++++ +.+||+|++++|+|+.|...++..|+ +++.+|+..++.+.+|++.+++.+.. +..+++.
T Consensus 100 t~G~~~~l~~~~~~~--~~~gd~vlv~~P~y~~~~~~~~~~g~-~~~~i~~~~~~~~~~d~~~l~~~~~~---~~~~v~l 173 (389)
T PRK08068 100 LFGGKAGLVELPQCL--MNPGDTILVPDPGYPDYLSGVALARA-QFETMPLIAENNFLPDYTKIPEEVAE---KAKLMYL 173 (389)
T ss_pred cCCcHHHHHHHHHHh--CCCCCEEEEcCCCCcchHHHHHhcCC-EEEEeecccccCCCCCHHHHHHhccc---cceEEEE
Confidence 999999999988876 67999999999999999999999999 99999984333566789999887742 3445555
Q ss_pred ccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 163 ACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 163 ~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
++||||||. +|.++|++++++||.| ++|..+.+++
T Consensus 174 ~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~D--eay~~~~~~~ 216 (389)
T PRK08068 174 NYPNNPTGAVATKAFFEETVAFAKKHNIGVVHD--FAYGAIGFDG 216 (389)
T ss_pred ECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEe--hhhhhhccCC
Confidence 689999997 7888999999999999 9999887763
No 23
>PRK07324 transaminase; Validated
Probab=99.95 E-value=4.5e-27 Score=206.56 Aligned_cols=173 Identities=15% Similarity=0.073 Sum_probs=142.4
Q ss_pred CCCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 2 YMSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 2 ~~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
|.-+|..+++|++|.+ ++.+++++ +|..++..+ ...+|++..|.++||+++++++.+ +++++| +
T Consensus 21 ~~~~~~~~~~~~~~e~-----~~~~~~~~-~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~~~~------~~~~~v--i 84 (373)
T PRK07324 21 YDIAESCIDSLTLEEL-----LALAGKNP-EAFYQELGQ--KKLTYGWIEGSPEFKEAVASLYQN------VKPENI--L 84 (373)
T ss_pred cccccCCCCCCcHHHH-----HhccCcch-HHHHHHHhc--CCccCCCCCCCHHHHHHHHHHhcC------CChhhE--E
Confidence 4457889999999953 45677788 776666543 456899999999999999998854 455665 5
Q ss_pred EeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEE
Q psy6266 82 QTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIIL 161 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil 161 (218)
+|.|+++|+.++++++ ++|||+|+++.|+|+.|..+++..|+ +++.+++..++.+.+|++.+.+.+. +++.+++
T Consensus 85 ~t~G~~~al~~~~~~l--~~~gd~Vl~~~P~y~~~~~~~~~~g~-~v~~v~~~~~~~~~~d~~~l~~~~~---~~~kli~ 158 (373)
T PRK07324 85 QTNGATGANFLVLYAL--VEPGDHVISVYPTYQQLYDIPESLGA-EVDYWQLKEENGWLPDLDELRRLVR---PNTKLIC 158 (373)
T ss_pred EcCChHHHHHHHHHHh--CCCCCEEEEcCCCchhHHHHHHHcCC-EEEEEecccccCCCCCHHHHHHhCC---CCCcEEE
Confidence 9999999999999877 78999999999999999999999999 9999988543445678988877664 3445666
Q ss_pred cccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 162 HACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 162 ~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
.++||||||. +|+++|++|+++||+| ++|.++.++
T Consensus 159 i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~D--e~y~~l~~~ 201 (373)
T PRK07324 159 INNANNPTGALMDRAYLEEIVEIARSVDAYVLSD--EVYRPLDED 201 (373)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE--ccccccccC
Confidence 6899999996 6888999999999999 999998875
No 24
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.94 E-value=2.3e-26 Score=202.34 Aligned_cols=179 Identities=13% Similarity=0.095 Sum_probs=142.8
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEec
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTL 84 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~ 84 (218)
+|..+|+|++|. + .+.+++.+.++..+.+.. ...++|.+..|.++||+++++++.. ..+...++++. +++|.
T Consensus 27 ~~~~~~~l~~~~---~--~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~-~~~~~~~~~~~-vi~t~ 98 (383)
T TIGR03540 27 EGVDVISLGIGD---P--DLPTPKHIVEALCKAAEN-PENHRYPSYEGMLAYRQAVADWYKR-RFGVELDPETE-VLSLI 98 (383)
T ss_pred cCCCeEEeCCCC---C--CCCCCHHHHHHHHHHHhC-CCCCCCCCCCCCHHHHHHHHHHHHH-hhCCCCCCCCe-EEECC
Confidence 678999999995 2 345678888888776543 2357899999999999999999864 43333444421 35889
Q ss_pred cChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 85 SGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 85 G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
|+++++.++++++ +++||+|++++|+|+.|..+++..|+ +++.+|+..++.+.+|++.+++.+.. +..+++.++
T Consensus 99 G~~~~l~~~~~~~--~~~gd~vlv~~P~y~~~~~~~~~~G~-~v~~v~~~~~~g~~~d~~~l~~~~~~---~~~~v~i~~ 172 (383)
T TIGR03540 99 GSKEGIAHIPLAF--VNPGDIVLVPDPGYPVYRIGTLFAGG-EPYEMPLKEENGFLPDFDAIPEDIAK---KAKLMFINY 172 (383)
T ss_pred CcHHHHHHHHHHh--CCCCCEEEEeCCCCcchHHHHHhcCC-EEEEEecCcccCCccCHHHHHhhccc---cceEEEEeC
Confidence 9999999998877 68999999999999999999999999 99999885333456689998887742 344555568
Q ss_pred CCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 165 AHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 165 p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
||||||. +|.++|++|+++||+| ++|.++.+++
T Consensus 173 P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~D--e~y~~l~~~~ 213 (383)
T TIGR03540 173 PNNPTGAVAPLKFFKELVEFAKEYNIIVCHD--NAYSEITFDG 213 (383)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHcCEEEEEe--cchhhhccCC
Confidence 9999997 7889999999999999 9999887653
No 25
>KOG0259|consensus
Probab=99.94 E-value=1.8e-26 Score=196.27 Aligned_cols=187 Identities=15% Similarity=0.103 Sum_probs=160.5
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEec
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTL 84 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~ 84 (218)
.++++|-|+.|.+ +.-+.+.+.+...+|...+++. +..+.|+|+.|++.-|+|+|+++.+ .-...++++.| ++|.
T Consensus 59 ~~k~iipl~~GDP-sv~~~~~ts~~a~~Av~~al~S-gk~N~Yaps~G~~~AR~AVAeYl~~-~l~~kl~a~DV--~lts 133 (447)
T KOG0259|consen 59 KKKPILPLGHGDP-SVYPCFRTSQEAEQAVVDALRS-GKGNGYAPSVGILPARRAVAEYLNR-DLPNKLTADDV--VLTS 133 (447)
T ss_pred cCceeccCCCCCC-CccccccCCHHHHHHHHHHHhc-CCCCCcCCccccHHHHHHHHHHhhc-CCCCccCcCce--EEec
Confidence 3458999999976 3467788888888998887765 5678999999999999999999765 43344677775 5999
Q ss_pred cChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 85 SGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 85 G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
|.++|+.+++.+| .+||..|++|.|+||-|....+..|+ +++.|.+..++++++|++.+++.+. +.++.+++++
T Consensus 134 GC~qAIe~~i~~L--A~p~aNILlPrPGfp~Y~~~a~~~~l-EVR~ydlLPe~~weIDL~~veal~D---ENT~AivviN 207 (447)
T KOG0259|consen 134 GCSQAIELAISSL--ANPGANILLPRPGFPLYDTRAIYSGL-EVRYYDLLPEKDWEIDLDGVEALAD---ENTVAIVVIN 207 (447)
T ss_pred cchHHHHHHHHHh--cCCCCceecCCCCCchHHHhhhhcCc-eeEeecccCcccceechHHHHHhhc---cCeeEEEEeC
Confidence 9999999999988 47999999999999999999999999 9999999888889999999988774 5677777789
Q ss_pred CCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCCHHHHH
Q psy6266 165 AHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVA 204 (218)
Q Consensus 165 p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ni~~~~ 204 (218)
||||+|. +|+++|++++|.||+| |+|.++.|++-..+.
T Consensus 208 P~NPcGnVys~~HL~kiae~A~klgi~vIaD--EVY~~~vfg~~pfvp 253 (447)
T KOG0259|consen 208 PNNPCGNVYSEDHLKKIAETAKKLGIMVIAD--EVYGHTVFGDKPFVP 253 (447)
T ss_pred CCCCCcccccHHHHHHHHHHHHHhCCeEEeh--hhcceeecCCCCccc
Confidence 9999997 8999999999999999 999999998654443
No 26
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.9e-26 Score=203.80 Aligned_cols=179 Identities=18% Similarity=0.141 Sum_probs=140.0
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
++|..+|+|+.|. +++ ++++.+.++..+.+.. ...+.|.+..|.++||+++++++.. ..+..+++++. +++|
T Consensus 32 ~~g~~~i~l~~g~---p~~--~~p~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~~~~-~~~~~~~~~~~-i~vt 103 (394)
T PRK05942 32 EQGLDLIDLGMGN---PDG--AAPQPVIEAAIAALAD-PQNHGYPPFEGTASFRQAITDWYHR-RYGVELDPDSE-ALPL 103 (394)
T ss_pred hcCCCeEEcCCCC---CCC--CCCHHHHHHHHHHHhC-CCCccCCCCCCCHHHHHHHHHHHHH-HHCCCcCCCCe-EEEc
Confidence 3688899999994 444 3455566554443332 2357899999999999999999964 43433556532 3589
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcc
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~ 163 (218)
.|+++|+.+++.++ ++|||+|++++|+|+.|...++..|+ +++.+++..++.+.+|++.+++.+. +++.+++.+
T Consensus 104 ~G~~~al~~~~~~~--~~~gd~Vlv~~P~y~~~~~~~~~~g~-~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~i~l~ 177 (394)
T PRK05942 104 LGSKEGLTHLALAY--VNPGDVVLVPSPAYPAHFRGPLIAGA-QIYPIILKPENDWLIDLSSIPEEVA---QQAKILYFN 177 (394)
T ss_pred cChHHHHHHHHHHh--CCCCCEEEEcCCCCcchHHHHHHcCC-EEEEeecCCccCCccCHHHHHHhcc---ccceEEEEc
Confidence 99999999998876 68999999999999999998999999 8999987433446789999988774 344555556
Q ss_pred cCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 164 CAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 164 ~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
+||||||. +|.++|++++++||+| ++|..+.++
T Consensus 178 ~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~D--e~y~~~~~~ 218 (394)
T PRK05942 178 YPSNPTTATAPREFFEEIVAFARKYEIMLVHD--LCYAELAFD 218 (394)
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEe--ccchhhccC
Confidence 89999997 6888999999999999 999988765
No 27
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.94 E-value=2e-26 Score=203.96 Aligned_cols=177 Identities=12% Similarity=0.100 Sum_probs=142.0
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCC-CceEEEEe
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLRE-GRAFGVQT 83 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~-~~v~~~~t 83 (218)
.|+.+|||++|. ++ +.+++.++++..+.... .....|. ..|.++||+++++++.. .++..+++ ++| ++|
T Consensus 30 ~~~~~i~l~~g~---p~--~~~~~~~~~~~~~~~~~-~~~~~y~-~~G~~~lr~aia~~~~~-~~g~~~~~~~~I--~it 99 (399)
T PRK07681 30 AGHKMIDLSIGN---PD--MPPADFVREEMVHTANQ-KESYGYT-LSGIQEFHEAVTEYYNN-THNVILNADKEV--LLL 99 (399)
T ss_pred cCCCeEEeCCCC---CC--CCCCHHHHHHHHHHHhc-cccCCCC-CCCcHHHHHHHHHHHHH-HhCCCCCCCCeE--EEC
Confidence 577899999995 22 45688899888876643 2234565 48999999999999965 54544666 565 599
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcc
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~ 163 (218)
.|+++++.++++++ ++|||+|++++|+|+.|...++..|+ +++.+|+..++.+.+|++.+.+.+. ++..+++.+
T Consensus 100 ~G~~~al~~~~~~~--~~~Gd~Vlv~~P~y~~~~~~~~~~G~-~~~~v~~~~~~~~~~d~~~l~~~~~---~~~k~v~l~ 173 (399)
T PRK07681 100 MGSQDGLVHLPMVY--ANPGDIILVPDPGYTAYETGIQMAGA-TSYYMPLKKENDFLPDLELIPEEIA---DKAKMMILN 173 (399)
T ss_pred CCcHHHHHHHHHHh--CCCCCEEEECCCCccchHHHHHhcCC-EEEEEecCCCCCCcCCHHHHHHhcc---ccceEEEEe
Confidence 99999999998877 68999999999999999999999999 9999998433345679999988774 234555567
Q ss_pred cCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 164 CAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 164 ~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
+||||||. +|+++|++++++||+| ++|.++.+++
T Consensus 174 ~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~D--e~y~~~~~~~ 215 (399)
T PRK07681 174 FPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHD--FAYAEFYFDG 215 (399)
T ss_pred CCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEe--ccchhheeCC
Confidence 89999997 6889999999999999 9999987753
No 28
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.94 E-value=2.4e-26 Score=204.37 Aligned_cols=183 Identities=12% Similarity=0.103 Sum_probs=148.4
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCC------CCCcCCCc
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDA------SPPLREGR 77 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~------~~~~~~~~ 77 (218)
+.|.++|+|++|.+ +.+++..+++.++++..+.++. ....+|.+..|.++||+++++++.. .. +..+++++
T Consensus 30 ~~~~~~i~l~~g~p-~~~~~~~p~~~~~~a~~~~~~~-~~~~~Y~~~~G~~~Lr~aia~~~~~-~~~~~~~~~~~~~~~~ 106 (412)
T PTZ00433 30 PSPKSIIKLSVGDP-TLDGNLLTPAIQTKALVEAVDS-QECNGYPPTVGSPEAREAVATYWRN-SFVHKESLKSTIKKDN 106 (412)
T ss_pred CCCCCeeecCCcCC-CCcCCCCCCHHHHHHHHHHhhc-CCCCCCCCCCCcHHHHHHHHHHHHh-hccccccccCCCChhh
Confidence 57889999999964 2223456789999998876653 2356899999999999999999863 32 23356677
Q ss_pred eEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCc
Q psy6266 78 AFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNS 157 (218)
Q Consensus 78 v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~ 157 (218)
| ++|.|+++++.++++++ ++|||+|++++|+|+.|...++..|+ +++.+++...+.+++|++.+++.+.. +.
T Consensus 107 i--~it~G~~~al~~~~~~~--~~~gd~vlv~~P~y~~~~~~~~~~g~-~~~~i~~~~~~~~~~d~~~l~~~~~~---~~ 178 (412)
T PTZ00433 107 V--VLCSGVSHAILMALTAL--CDEGDNILVPAPGFPHYETVCKAYGI-EMRFYNCRPEKDWEADLDEIRRLVDD---RT 178 (412)
T ss_pred E--EEeCChHHHHHHHHHHh--cCCCCEEEEccCCcccHHHHHHHcCC-EEEEEecCccccCcCCHHHHHHHhcc---Cc
Confidence 6 59999999999999887 67999999999999999999999999 89999874334568899999877753 34
Q ss_pred EEEEcccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 158 VIILHACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 158 ~iil~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
.+++.++||||||. +|+++|++++++||+| ++|.++.+++
T Consensus 179 ~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~D--e~y~~~~~~~ 226 (412)
T PTZ00433 179 KALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISD--EIYAGMVFNG 226 (412)
T ss_pred eEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEe--ccccccccCC
Confidence 44556789999996 6788999999999999 9999998764
No 29
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.94 E-value=4.4e-26 Score=201.33 Aligned_cols=175 Identities=16% Similarity=0.067 Sum_probs=141.8
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCC--cCCC-ceEEE
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPP--LREG-RAFGV 81 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~--~~~~-~v~~~ 81 (218)
+|.++|+|++|. +++.+++.+++|.++... ....|.+..|.++||+++++++.+ .++.. ++++ +| +
T Consensus 26 ~~~~~i~l~~~~-----p~~~~~~~~~~a~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~-~~~~~~~~~~~~~i--~ 94 (393)
T TIGR03538 26 ASKPPIALSIGE-----PKHPTPAFVLEALRENLH---GLSTYPTTKGLPELRQAIARWLER-RFDLPTGVDPERHV--L 94 (393)
T ss_pred cCCCeEEecCCC-----CCCCCCHHHHHHHHHHhh---ccCCCCCCCCCHHHHHHHHHHHHH-hhCCcccCCCCceE--E
Confidence 578999999995 234568889998877653 356799999999999999999965 53332 4554 44 5
Q ss_pred EeccChhHHHHHHHHHHHhcCCCe--EEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEE
Q psy6266 82 QTLSGTGALRVGAEFLHRILNYTT--FYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVI 159 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~gd~--V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i 159 (218)
+|.|+++++.++++++ ++|||+ |++++|+|+.|..+++..|+ +++.+++..++.+.+|++.+++.+.+ ++.+
T Consensus 95 it~Ga~~al~~~~~~l--~~~gd~~~vlv~~P~y~~~~~~~~~~g~-~~~~v~~~~~~~~~~d~~~l~~~~~~---~~k~ 168 (393)
T TIGR03538 95 PVNGTREALFAFAQAV--INPGQAPLVVMPNPFYQIYEGAALLAGA-EPYFLNCTAENGFLPDFDAVPESVWR---RCQL 168 (393)
T ss_pred ECCCcHHHHHHHHHHH--cCCCCcceEEecCCCCcchHHHHHhcCC-eEEEeeccccCCCCCCHHHHHHHHhh---cceE
Confidence 9999999999999877 689986 99999999999999999999 99999884343466789999887753 3344
Q ss_pred EEcccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 160 ILHACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 160 il~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
++.++||||||. +|+++|++|+++||+| ++|..+.++
T Consensus 169 i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~D--e~Y~~~~~~ 213 (393)
T TIGR03538 169 LFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASD--ECYSELYFD 213 (393)
T ss_pred EEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEC--cchhhcccC
Confidence 444799999997 7889999999999999 999998775
No 30
>PLN02231 alanine transaminase
Probab=99.94 E-value=2.5e-26 Score=210.00 Aligned_cols=177 Identities=12% Similarity=0.039 Sum_probs=139.6
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcC-CCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccC
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKELAADD-SLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSG 86 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~ 86 (218)
.+|||+.|. ..++ .+.+++|.+.+.+.. ....+|+++.|.++||+++++++.+ +++..+++++| ++|.|+
T Consensus 130 ~~i~~~~~~-----~~fp-~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~-r~g~~~~pe~I--~iT~Ga 200 (534)
T PLN02231 130 SLLDKSETH-----GLFS-ADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEA-RDGFPADPNDI--FLTDGA 200 (534)
T ss_pred ccCCCCCcc-----ccCC-HHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHh-ccCCCCCcccE--EEeCCH
Confidence 567777652 2232 355566554333221 2356799999999999999999977 66666777876 599999
Q ss_pred hhHHHHHHHHHHHh-cCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCC---CCcEEEEc
Q psy6266 87 TGALRVGAEFLHRI-LNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAP---DNSVIILH 162 (218)
Q Consensus 87 ~~al~~~~~~l~~l-~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~---~~~~iil~ 162 (218)
++|+.++++++ + .+||+|+++.|+|+.|...++..|+ +++.+++..++.+++|++.+++.+++.. .+..+++.
T Consensus 201 ~~ai~~~~~~l--~~~~gd~Vli~~P~Y~~y~~~~~~~g~-~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl 277 (534)
T PLN02231 201 SPAVHMMMQLL--IRSEKDGILCPIPQYPLYSASIALHGG-TLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVV 277 (534)
T ss_pred HHHHHHHHHHh--ccCCCCEEEEeCCCChhHHHHHHHcCC-EEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEE
Confidence 99999999887 4 4799999999999999999999999 8999988544457899999999886531 13445555
Q ss_pred ccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 163 ACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 163 ~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
++||||||. +|+++|++++++||+| |+|.++.|+
T Consensus 278 ~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~D--EvY~~l~y~ 319 (534)
T PLN02231 278 INPGNPTGQVLAEENQRDIVEFCKQEGLVLLAD--EVYQENVYV 319 (534)
T ss_pred eCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEE--ccchhcccC
Confidence 789999998 7899999999999999 999999884
No 31
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.94 E-value=4.7e-26 Score=200.44 Aligned_cols=178 Identities=12% Similarity=0.072 Sum_probs=141.6
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEec
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTL 84 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~ 84 (218)
.|..+|+|+.|. +++.+++.++++..+.... ....+|.+..|.++||+++++++.+ ..+..+++++. +++|.
T Consensus 29 ~~~~~i~l~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~~~~-~~g~~~~~~~~-ii~t~ 100 (385)
T PRK09276 29 RGVDVISLGIGD-----PDLPTPDHIIEAMCKAVED-PENHQYPSYEGMLEFRKAVADWYKR-RFGVELDPETE-VISLI 100 (385)
T ss_pred cCCCEEEecCCC-----CCCCCCHHHHHHHHHHHhC-CCCCCCCCCCCcHHHHHHHHHHHHH-HhCCCCCCCCc-EEEcc
Confidence 467899999994 2346678889888877643 2356899999999999999999964 43433555532 35789
Q ss_pred cChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 85 SGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 85 G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
|+++++.++++++ ++|||+|++++|+|+.|...++..|+ +++.+++..++.+.+|++.+++.+. +++.+++.++
T Consensus 101 G~~~~i~~~~~~~--~~~gd~Vl~~~P~y~~~~~~~~~~g~-~~~~v~~~~~~g~~~d~~~l~~~~~---~~~~~v~l~~ 174 (385)
T PRK09276 101 GSKEGIAHIPLAF--VNPGDVVLVPDPGYPVYKIGTIFAGG-EPYFMPLKEENGFLPDLDAIPEDVA---KKAKLMFINY 174 (385)
T ss_pred CcHHHHHHHHHHh--CCCCCEEEEcCCCCcChHHHHHHcCC-EEEEEecCCCCCCcCCHHHHHHhcc---ccceEEEEeC
Confidence 9999999998877 68999999999999999999999999 9999988433345678888877664 2344555568
Q ss_pred CCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 165 AHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 165 p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
||||||. +|+++|++|+++||.| ++|.++.++
T Consensus 175 p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~D--e~y~~~~~~ 214 (385)
T PRK09276 175 PNNPTGAVADLEFFEEVVDFAKKYDIIVCHD--AAYSEIAYD 214 (385)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCcEEEEe--cchhheecC
Confidence 9999997 6888899999999999 999988765
No 32
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.94 E-value=4.9e-26 Score=202.40 Aligned_cols=176 Identities=14% Similarity=0.104 Sum_probs=140.5
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCC-cCCC-ceEEEEe
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPP-LREG-RAFGVQT 83 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~-~~~~-~v~~~~t 83 (218)
|..+|||++|. +++.+++.+++++.+.+.. .....|.+ .|.++||+++++++.. ..+.. ++++ +| ++|
T Consensus 43 ~~~~i~L~~g~-----p~~~~~~~~~~~l~~~~~~-~~~~~Y~~-~G~~~lr~aia~~~~~-~~g~~~~~~~~~I--~it 112 (410)
T PRK06290 43 DMELIDMGVGE-----PDEMADESVVEVLCEEAKK-PENRGYAD-NGIQEFKEAAARYMEK-VFGVKDIDPVTEV--IHS 112 (410)
T ss_pred CCCeEEcCCCC-----CCCCCCHHHHHHHHHHHhC-CCCCCCCC-CCcHHHHHHHHHHHHH-HcCCCcCCCcceE--EEc
Confidence 66799999995 2345677888887765533 23456875 8999999999999965 44444 5554 55 599
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcc
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~ 163 (218)
.|+++++.++++++ +++||+|++++|+|+.|...++..|+ +++.+++..+..+.+|++.+++.+.. +..+++.+
T Consensus 113 ~Gs~~al~~~~~~~--~~~gd~Vlv~~P~y~~~~~~~~~~g~-~v~~v~~~~~~~~~~d~~~l~~~~~~---~~k~i~l~ 186 (410)
T PRK06290 113 IGSKPALAMLPSCF--INPGDVTLMTVPGYPVTGTHTKYYGG-EVYNLPLLEENNFLPDLDSIPKDIKE---KAKLLYLN 186 (410)
T ss_pred cCHHHHHHHHHHHh--CCCCCEEEEeCCCCccHHHHHHHcCC-EEEEEecCCCcCCcCCHHHHHHhhcc---cceEEEEE
Confidence 99999999999877 68999999999999999999999999 99999985433456689888887743 34455556
Q ss_pred cCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 164 CAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 164 ~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
+||||||. +|.++|++|+++||+| ++|.++.+++
T Consensus 187 nP~NPTG~v~s~e~l~~l~~la~~~~~~iI~D--EaY~~~~~~~ 228 (410)
T PRK06290 187 YPNNPTGAVATKEFYEEVVDFAKENNIIVVQD--AAYAALTFDG 228 (410)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEe--cchhhceeCC
Confidence 89999998 7888999999999999 9999987753
No 33
>PRK08960 hypothetical protein; Provisional
Probab=99.94 E-value=4.9e-26 Score=200.63 Aligned_cols=176 Identities=15% Similarity=0.077 Sum_probs=144.2
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEec
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTL 84 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~ 84 (218)
.|..+|+|+.|.+ .+++++.++++..+.+.. ...+|.+..|.++||+++++++.. ..+..+++++| ++|.
T Consensus 30 ~~~~~i~l~~g~~-----~~~~~~~v~~a~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~-~~g~~~~~~~i--~it~ 99 (387)
T PRK08960 30 AGHDVIHLEIGEP-----DFTTAEPIVAAGQAALAA--GHTRYTAARGLPALREAIAGFYAQ-RYGVDVDPERI--LVTP 99 (387)
T ss_pred cCCCeEEeCCCCC-----CCCCCHHHHHHHHHHHhc--CCCccCCCCCCHHHHHHHHHHHHH-HhCCCCChhhE--EEcc
Confidence 4678999999952 345689999998877753 345799999999999999999854 44444667776 5999
Q ss_pred cChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 85 SGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 85 G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
|+++|+.++++++ ++|||+|++++|+|+.|...++..|. +++.+++..+..+.+|++.+++.+. +++.+++.++
T Consensus 100 G~~~al~~~~~~~--~~~gd~vlv~~p~y~~~~~~~~~~g~-~~~~v~~~~~~~~~~d~~~l~~~~~---~~~~~i~i~~ 173 (387)
T PRK08960 100 GGSGALLLASSLL--VDPGKHWLLADPGYPCNRHFLRLVEG-AAQLVPVGPDSRYQLTPALVERHWN---ADTVGALVAS 173 (387)
T ss_pred CcHHHHHHHHHHh--cCCCCEEEEcCCCCcchHHHHHhcCC-eEEEEecCcccCCCCCHHHHHHHhC---ccceEEEEEC
Confidence 9999999999877 68999999999999999999999999 8999987433345688999888775 3345555678
Q ss_pred CCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 165 AHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 165 p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
||||||. +|+++|++|++++|.| ++|.++.++
T Consensus 174 p~NPtG~~~~~~~~~~l~~~~~~~~~~li~D--e~Y~~~~~~ 213 (387)
T PRK08960 174 PANPTGTLLSRDELAALSQALRARGGHLVVD--EIYHGLTYG 213 (387)
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCCEEEEE--ccccccccC
Confidence 9999998 6888899999999999 999998775
No 34
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.94 E-value=5.3e-26 Score=201.29 Aligned_cols=181 Identities=12% Similarity=0.097 Sum_probs=147.9
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEec
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTL 84 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~ 84 (218)
.|.++|+|++|.+ +..+++++++.++++..+.+.+ .....|.|..|.++||+++++++.. .+. .+.+++| ++|.
T Consensus 29 ~~~~~i~l~~g~p-~~~~~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~g~~~lr~aia~~~~~-~~~-~~~~~~i--~~t~ 102 (401)
T TIGR01264 29 PEKPMIKLSIGDP-TVFGNLPTDPEVMQAMKDSLDS-GKYNGYAPTVGALSAREAIASYYHN-PDG-PIEADDV--VLCS 102 (401)
T ss_pred cCCCeeecCCCCC-CCcCCCCCCHHHHHHHHHHHhc-cCCCCCCCCCCCHHHHHHHHHHHhh-cCC-CCCHHHE--EECc
Confidence 3678899999975 2234567789999988877654 2345799999999999999999975 544 3667775 5899
Q ss_pred cChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 85 SGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 85 G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
|+++++.++++++ +++||+|++++|+|+.|..+++..|+ +++.+++...+.+++|++.+++.+.. ++.+++.++
T Consensus 103 G~~~al~~~~~~l--~~~gd~v~i~~P~y~~~~~~~~~~g~-~v~~~~~~~~~~~~~d~~~l~~~~~~---~~~~v~~~~ 176 (401)
T TIGR01264 103 GCSHAIEMCIAAL--ANAGQNILVPRPGFPLYETLAESMGI-EVKLYNLLPDKSWEIDLKQLESLIDE---KTAALIVNN 176 (401)
T ss_pred ChHHHHHHHHHHh--CCCCCEEEEeCCCChhHHHHHHHcCC-EEEEeecCCccCCCCCHHHHHHHhcc---CceEEEEcC
Confidence 9999999999887 67999999999999999999999999 89898875444568899999887753 234455578
Q ss_pred CCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 165 AHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 165 p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
||||||. +|+++|++++++||+| ++|.+|.+++
T Consensus 177 p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~D--e~y~~~~~~~ 217 (401)
T TIGR01264 177 PSNPCGSVFSRQHLEEILAVAERQCLPIIAD--EIYGDMVFSG 217 (401)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE--hhhhhhccCC
Confidence 9999996 6888999999999999 9999998764
No 35
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.94 E-value=7.2e-26 Score=200.98 Aligned_cols=177 Identities=11% Similarity=0.034 Sum_probs=140.8
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCC-CceEEEEecc
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLRE-GRAFGVQTLS 85 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~-~~v~~~~t~G 85 (218)
.++|||++|.+ +. ..+++.++++..+.+.. ....+|.+..|.++||+++++++.+ ..+..+++ ++| ++|.|
T Consensus 39 ~~~i~l~~g~~---~~-~~p~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~LR~aia~~l~~-~~g~~~~~~~~I--~it~G 110 (405)
T PRK06207 39 GRPVDFSHGDV---DA-HEPTPGAFELFSAGVER-GGVQAYTEYRGDADIRELLAARLAA-FTGAPVDAADEL--IITPG 110 (405)
T ss_pred CCceecCCcCC---CC-CCCCHHHHHHHHHHHhc-CCCccCCCCCCCHHHHHHHHHHHHH-HhCCCCCCCCCE--EEeCC
Confidence 36789999963 42 34567777776666543 2356799999999999999999854 43433555 665 59999
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccC---CcCccccHHHHHHHHhcCCCCcEEEEc
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWN---PEKRAVDFTGMYEDLVNAPDNSVIILH 162 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~---~~~~~~d~~~~~~~l~~~~~~~~iil~ 162 (218)
+++++.++++++ ++|||+|++++|+|+.|..+++..|+ +++.+++.. .+.+++|++.+++.+.+ +..+++.
T Consensus 111 a~~al~~~~~~l--~~~Gd~Vlv~~P~y~~~~~~~~~~g~-~v~~v~~~~~~~~~~~~~d~~~l~~~~~~---~~k~v~l 184 (405)
T PRK06207 111 TQGALFLAVAAT--VARGDKVAIVQPDYFANRKLVEFFEG-EMVPVQLDYLSADKRAGLDLDQLEEAFKA---GVRVFLF 184 (405)
T ss_pred cHHHHHHHHHHh--cCCCCEEEEeCCCchhHHHHHHHcCC-EEEEEeccccCcccCCCcCHHHHHHhhhh---cCeEEEE
Confidence 999999999877 68999999999999999999999999 898888631 22467899999888753 3445556
Q ss_pred ccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 163 ACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 163 ~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
++||||||. +|.++|++|+++||+| ++|..+.++.
T Consensus 185 ~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~D--e~Y~~~~~~~ 227 (405)
T PRK06207 185 SNPNNPAGVVYSAEEIAQIAALARRYGATVIVD--QLYSRLLYDG 227 (405)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe--ccccccccCC
Confidence 789999998 6888999999999999 9999988753
No 36
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.94 E-value=8.2e-26 Score=199.09 Aligned_cols=176 Identities=8% Similarity=0.032 Sum_probs=139.6
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEecc
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLS 85 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G 85 (218)
+..+|||++|. ++ +++++.+.++..+.... ...+|.+..|.++||+++++++.+ ..+..+++++| ++|.|
T Consensus 28 ~~~~i~l~~g~---p~--~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~~~~-~~~~~~~~~~i--~it~G 97 (384)
T PRK06348 28 FPDIIDLSLGD---PD--LITDESIINAAFEDAKK--GHTRYTDSGGDVELIEEIIKYYSK-NYDLSFKRNEI--MATVG 97 (384)
T ss_pred cCCcEEcCCCC---CC--CCCCHHHHHHHHHHHhc--CCCCCCCCCCcHHHHHHHHHHHHH-HhCCCCChhhE--EEcCC
Confidence 35689999995 23 45566666654433322 356799999999999999999965 54444677776 59999
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
+++|+.++++++ ++|||+|++++|+|+.|...++..|+ +++.+++...+.+.+|++.+++.++. +..+++.++|
T Consensus 98 ~~~al~~~~~~~--~~~gd~vlv~~p~y~~~~~~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~~p 171 (384)
T PRK06348 98 ACHGMYLALQSI--LDPGDEVIIHEPYFTPYKDQIEMVGG-KPIILETYEEDGFQINVKKLEALITS---KTKAIILNSP 171 (384)
T ss_pred hHHHHHHHHHHh--cCCCCEEEEeCCCCcchHHHHHHcCC-EEEEecCCcCcCCcCCHHHHHHhhCc---CccEEEEeCC
Confidence 999999999887 68999999999999999999999999 88888875444567899999887753 3333444689
Q ss_pred CCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 166 HNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 166 ~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
|||||. +|.++|++++++||+| ++|.++.++.
T Consensus 172 ~NPtG~~~s~~~~~~l~~~a~~~~~~ii~D--e~y~~~~~~~ 211 (384)
T PRK06348 172 NNPTGAVFSKETLEEIAKIAIEYDLFIISD--EVYDGFSFYE 211 (384)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHCCeEEEEe--cccccceeCC
Confidence 999997 6888999999999999 9999998763
No 37
>PRK07337 aminotransferase; Validated
Probab=99.94 E-value=1.6e-25 Score=197.36 Aligned_cols=178 Identities=15% Similarity=0.059 Sum_probs=144.5
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
+.|.++|+|+.|. +++++++.+.++..+.... ....|.+..|.++||+++++++.. ..+..+++++| ++|
T Consensus 27 ~~~~~~i~l~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~-~~~~~~~~~~i--~~t 96 (388)
T PRK07337 27 RAGRDIIHMGIGE-----PDFTAPEPVVEAAARALRR--GVTQYTSALGLAPLREAIAAWYAR-RFGLDVAPERI--VVT 96 (388)
T ss_pred hcCCCEEEeCCcC-----CCCCCCHHHHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHHHH-HhCCCCChHhE--EEe
Confidence 3577899999995 2345678888887776643 356799999999999999999854 44444667775 599
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcc
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~ 163 (218)
.|+++|+.+++.++ +++||+|++++|+|+++...++..|+ +++.+++..++.+.+|++.+++.+. +++.+++.+
T Consensus 97 ~G~~~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~ 170 (388)
T PRK07337 97 AGASAALLLACLAL--VERGDEVLMPDPSYPCNRHFVAAAEG-RPVLVPSGPAERFQLTAADVEAAWG---ERTRGVLLA 170 (388)
T ss_pred cCcHHHHHHHHHHh--cCCCCEEEEeCCCchhhHHHHHHcCC-EEEEeecCCccCCcCCHHHHHhhcC---ccceEEEEE
Confidence 99999999998877 68999999999999999999999999 8999988433456789999888774 344555558
Q ss_pred cCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 164 CAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 164 ~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
+||||||. +|.++|+++++++|.| ++|.++.++.
T Consensus 171 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~D--e~y~~~~~~~ 212 (388)
T PRK07337 171 SPSNPTGTSIAPDELRRIVEAVRARGGFTIVD--EIYQGLSYDA 212 (388)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEe--ccccccccCC
Confidence 89999997 6888899999999999 9999887753
No 38
>PRK09148 aminotransferase; Validated
Probab=99.93 E-value=1.8e-25 Score=198.40 Aligned_cols=179 Identities=16% Similarity=0.150 Sum_probs=138.5
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCC-ceEEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG-RAFGV 81 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~-~v~~~ 81 (218)
...|..+|+|+.|. + ++++++.+.++..+.... ....+|.+..|.++||+++++++.. ..+..++++ +| +
T Consensus 26 ~~~~~~~i~l~~~~---p--~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~~~~-~~g~~~~~~~~I--~ 96 (405)
T PRK09148 26 RAAGADIIDLGMGN---P--DLPTPQHIVDKLCETAQD-PRTHRYSASKGIPGLRRAQAAYYAR-RFGVKLNPDTQV--V 96 (405)
T ss_pred HhcCCCeEEcCCCC---C--CCCCCHHHHHHHHHHHcC-cccCCCCCCCCCHHHHHHHHHHHHH-HhCCCCCCCCcE--E
Confidence 34688999999995 2 345577888877766533 2357899999999999999999853 333335555 55 5
Q ss_pred EeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEE
Q psy6266 82 QTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIIL 161 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil 161 (218)
+|.|+++++.++++++ +++||+|++++|+|+.|...++..|+ +++.+++..+..+ ...+.+.++...+++.+++
T Consensus 97 it~G~~~al~~~~~~l--~~~gd~Vl~~~P~y~~~~~~~~~~g~-~v~~v~~~~~~~~---~~~l~~~~~~~~~~~~~v~ 170 (405)
T PRK09148 97 ATLGSKEGFANMAQAI--TAPGDVILCPNPSYPIHAFGFIMAGG-VIRSVPAEPDEEF---FPALERAVRHSIPKPIALI 170 (405)
T ss_pred EcCChHHHHHHHHHHh--cCCCCEEEEcCCCCcccHHHHHhcCC-EEEEEeCCCCCCC---ccCHHHHHhhccccceEEE
Confidence 9999999999999887 68999999999999999999999999 8999987432222 2334444443334556666
Q ss_pred cccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 162 HACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 162 ~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
.++||||||. +|.++|++|+++||+| ++|.++.++
T Consensus 171 l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~D--e~Y~~~~~~ 213 (405)
T PRK09148 171 VNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSD--LAYSEIYFD 213 (405)
T ss_pred EeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEe--ccchhhhcC
Confidence 6789999997 6889999999999999 999998775
No 39
>PRK08912 hypothetical protein; Provisional
Probab=99.93 E-value=7.5e-25 Score=193.02 Aligned_cols=173 Identities=15% Similarity=0.080 Sum_probs=137.4
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCC-ceEEEEecc
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG-RAFGVQTLS 85 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~-~v~~~~t~G 85 (218)
..+|||+.|.+ +. +.++.+.++..+.+.+ ...+|.+..|.++||+++++++.. ..+...+++ +| ++|.|
T Consensus 26 ~~~i~l~~g~p---~~--~~p~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~~~~-~~g~~~~~~~~i--~~t~G 95 (387)
T PRK08912 26 HGAINLGQGFP---DD--PGPEDVRRAAADALLD--GSNQYPPMMGLPELRQAVAAHYAR-FQGLDLDPETEV--MVTSG 95 (387)
T ss_pred CCeEEccCCCC---CC--CCCHHHHHHHHHHHhc--CCCCCCCCCCcHHHHHHHHHHHHH-HhCCCCCCcccE--EEeCC
Confidence 57899999973 33 3355666665555533 356799999999999999999864 444445665 55 59999
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
+++++.+++.++ ++|||+|++++|+|++|..+++..|+ +++.+++. .+.+++|++.+++.+.. +..+++.++|
T Consensus 96 ~~~al~~~~~~~--~~~gd~Vlv~~p~y~~~~~~~~~~g~-~~~~~~~~-~~~~~~~~~~l~~~~~~---~~~~v~l~~p 168 (387)
T PRK08912 96 ATEALAAALLAL--VEPGDEVVLFQPLYDAYLPLIRRAGG-VPRLVRLE-PPHWRLPRAALAAAFSP---RTKAVLLNNP 168 (387)
T ss_pred cHHHHHHHHHHh--cCCCCEEEEeCCCchhhHHHHHHcCC-EEEEEecC-cccCcCCHHHHHHHhCc---cceEEEEeCC
Confidence 999999888876 67999999999999999999999999 89999873 33567899999887743 3344445689
Q ss_pred CCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 166 HNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 166 ~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
|||||. +|.++|++|+++||.| ++|..+.++
T Consensus 169 ~NPtG~~~s~~~~~~i~~~~~~~~~~ii~D--e~y~~~~~~ 207 (387)
T PRK08912 169 LNPAGKVFPREELALLAEFCQRHDAVAICD--EVWEHVVFD 207 (387)
T ss_pred CCCcCcccCHHHHHHHHHHHHHCCeEEEEh--hhhhhcccC
Confidence 999997 5889999999999999 999988775
No 40
>PRK08363 alanine aminotransferase; Validated
Probab=99.93 E-value=6.9e-25 Score=194.02 Aligned_cols=181 Identities=14% Similarity=0.048 Sum_probs=144.2
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|.++|+|+.|.+.. .++.+++.++++..+++.. ....|.+..|.++||+++++++.. .++..+++++| ++|
T Consensus 27 ~~~~~~i~l~~g~p~~--~~~~p~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~-~~g~~~~~~~i--~it 99 (398)
T PRK08363 27 KKGIKVIRLNIGDPVK--FDFQPPEHMKEAYCRAIKE--GHNYYGPSEGLPELREAIVKREKR-KNGVDITPDDV--RVT 99 (398)
T ss_pred hcCCCeEEEeCCCCCc--CCCCCCHHHHHHHHHHHHc--CCCCCCCCCCcHHHHHHHHHHHHH-hcCCCCChhhE--EEe
Confidence 3678999999996421 1345688899988877643 345799999999999999999865 55544677775 599
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcc
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~ 163 (218)
.|+++|+.++++++ +++||+|++++|+|+.|...++..|+ +++.++...++.+.+|++.+++.+.. ++.+++.+
T Consensus 100 ~G~~~al~~~~~~~--~~~gd~Vl~~~p~y~~~~~~~~~~g~-~~v~~~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~ 173 (398)
T PRK08363 100 AAVTEALQLIFGAL--LDPGDEILIPGPSYPPYTGLVKFYGG-VPVEYRTIEEEGWQPDIDDIRKKITE---KTKAIAVI 173 (398)
T ss_pred CCHHHHHHHHHHHh--CCCCCEEEEcCCCCcchHHHHHHcCC-EEEEeccccccCCcCCHHHHHhhCCc---ceEEEEEE
Confidence 99999999999877 68999999999999999999999998 88887432344456788888877742 34445557
Q ss_pred cCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 164 CAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 164 ~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
+||||||. +|.++|+++++++|.| ++|.++.++.
T Consensus 174 ~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~D--eay~~~~~~~ 215 (398)
T PRK08363 174 NPNNPTGALYEKKTLKEILDIAGEHDLPVISD--EIYDLMTYEG 215 (398)
T ss_pred CCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEh--hhhhhhccCC
Confidence 99999996 6888899999999999 9999887753
No 41
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.93 E-value=3.7e-25 Score=196.48 Aligned_cols=171 Identities=9% Similarity=-0.017 Sum_probs=131.1
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcC---CCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADD---SLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
|..+|+|++|. .++.+++.+.++..+.+.+. ....+|.|..|.++||+++++++++ ..+..+++++| ++
T Consensus 33 ~~~~i~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~-~~g~~~~~~~I--~i 104 (409)
T PRK07590 33 EAKIIRLGIGD-----VTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQ-ARGCDISADEI--FI 104 (409)
T ss_pred CCceEEecCcC-----CCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHH-hcCCcCChhhE--EE
Confidence 67899999995 33466788888877766431 1346899999999999999999865 55555777876 59
Q ss_pred eccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCc-----------ceeEeccCCcCccccHHHHHHHHh
Q psy6266 83 TLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTE-----------AREYRYWNPEKRAVDFTGMYEDLV 151 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~-----------~~~~~~~~~~~~~~d~~~~~~~l~ 151 (218)
|.|+++++.++.. + ++|||+|++++|+|+.|..+++..|. + ++.+++..++.+.+|+ .
T Consensus 105 t~Ga~~al~~l~~-~--~~~gd~V~v~~P~Y~~~~~~~~~~g~-~~~~~~~~~~~~~~~v~~~~~~~~~~d~-------~ 173 (409)
T PRK07590 105 SDGAKCDTGNILD-I--FGPDNTIAVTDPVYPVYVDTNVMAGR-TGEANEDGRYSGIVYLPCTAENNFVPEL-------P 173 (409)
T ss_pred CCCHHHHHHHHHH-h--cCCCCEEEEeCCCCcchHHHHHHcCC-cccccccccccceeEeecccccCCcccC-------c
Confidence 9999999998643 3 57999999999999999999999998 6 7777763222222232 1
Q ss_pred cCCCCcEEEEcccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 152 NAPDNSVIILHACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 152 ~~~~~~~iil~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
+ ++..+++.++||||||. +|+++|++|+++||+| ++|.++.++.
T Consensus 174 ~--~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~D--e~Y~~~~~~~ 225 (409)
T PRK07590 174 E--EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFD--AAYEAFISDP 225 (409)
T ss_pred c--cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEE--ccchhhccCC
Confidence 1 23344444699999997 7889999999999999 9999987753
No 42
>PRK07682 hypothetical protein; Validated
Probab=99.93 E-value=9.4e-25 Score=191.78 Aligned_cols=175 Identities=17% Similarity=0.086 Sum_probs=139.9
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCC-ceEEEEecc
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG-RAFGVQTLS 85 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~-~v~~~~t~G 85 (218)
..+|+|+.|.+ ++.+++.++++..+...+ ...+|.+..|.++||+++++++.. ..+..++++ +| ++|.|
T Consensus 20 ~~~i~l~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~-~~g~~~~~~~~i--~~t~G 89 (378)
T PRK07682 20 EGVISLGVGEP-----DFVTPWNVREASIRSLEQ--GYTSYTANAGLLELRQEIAKYLKK-RFAVSYDPNDEI--IVTVG 89 (378)
T ss_pred CCeEEeCCCCC-----CCCCCHHHHHHHHHHHhc--CCCCCCCCCCcHHHHHHHHHHHHH-HhCCCCCCCCcE--EEeCC
Confidence 36899999963 234577788887766643 356799999999999999999965 434335554 55 59999
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
+++|+.++++++ ++|||+|++++|+|+.|...++..|+ +++.++....+.+++|++.+++.+.. +..+++.++|
T Consensus 90 ~~~al~~~~~~l--~~~gd~vl~~~p~y~~~~~~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~v~~~~p 163 (378)
T PRK07682 90 ASQALDVAMRAI--INPGDEVLIVEPSFVSYAPLVTLAGG-VPVPVATTLENEFKVQPAQIEAAITA---KTKAILLCSP 163 (378)
T ss_pred hHHHHHHHHHHh--CCCCCEEEEeCCCchhhHHHHHHcCC-EEEEeecCCccCCCCCHHHHHhhcCc---ccEEEEEECC
Confidence 999999998877 68999999999999999999999999 88888863233567899999887743 3444545689
Q ss_pred CCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 166 HNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 166 ~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
|||||. +|+++|++|++++|+| ++|.++.++.
T Consensus 164 ~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D--e~y~~~~~~~ 203 (378)
T PRK07682 164 NNPTGAVLNKSELEEIAVIVEKHDLIVLSD--EIYAELTYDE 203 (378)
T ss_pred CCCcCcCcCHHHHHHHHHHHHHcCcEEEEe--hhhhhcccCC
Confidence 999997 6889999999999999 9999998763
No 43
>PRK12414 putative aminotransferase; Provisional
Probab=99.93 E-value=9.2e-25 Score=192.50 Aligned_cols=174 Identities=13% Similarity=0.147 Sum_probs=140.1
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCC-CceEEEEecc
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLRE-GRAFGVQTLS 85 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~-~~v~~~~t~G 85 (218)
.++|+|+.|.+ .+++++.+.++..++..+ ...+|.|..|.++||+++++++.. ..+...++ ++| ++|.|
T Consensus 29 ~~~i~l~~g~p-----~~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~l~~-~~g~~~~~~~~i--~it~g 98 (384)
T PRK12414 29 HDALNLSQGAP-----NFAPDPALVEGVARAMRD--GHNQYAPMAGIAALREALAEKTER-LYGARYDPASEV--TVIAS 98 (384)
T ss_pred CCeEEcCCCCC-----CCCCCHHHHHHHHHHHHh--CCCCcCCCCCcHHHHHHHHHHHHH-HhCCCCCCCCcE--EEECC
Confidence 46899999952 345688889888776643 356799999999999999998744 33332333 455 59999
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
+++++.++++++ ++|||+|++++|+|+.|..+++..|+ +++.++.. .+.+.+|++.+++.+. ++..+++.++|
T Consensus 99 ~~~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~g~-~~~~v~~~-~~~~~~d~~~l~~~l~---~~~~~v~i~~p 171 (384)
T PRK12414 99 ASEGLYAAISAL--VHPGDEVIYFEPSFDSYAPIVRLQGA-TPVAIKLS-PEDFRVNWDEVAAAIT---PRTRMIIVNTP 171 (384)
T ss_pred hHHHHHHHHHHh--cCCCCEEEEeCCCccchHHHHHHcCC-EEEEEecC-ccccccCHHHHHhhcC---cccEEEEEcCC
Confidence 999999998877 68999999999999999999999999 89999873 3456789999988775 23445555789
Q ss_pred CCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 166 HNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 166 ~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
|||||. +|.++|++|++++|.| ++|..+.|++
T Consensus 172 ~NPTG~~~s~~~~~~i~~~a~~~~~~ii~D--e~Y~~~~~~~ 211 (384)
T PRK12414 172 HNPSATVFSAADLARLAQLTRNTDIVILSD--EVYEHVVFDG 211 (384)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHCCeEEEEh--hhhhhccCCC
Confidence 999997 6788899999999999 9999988764
No 44
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.93 E-value=3.9e-25 Score=200.85 Aligned_cols=171 Identities=8% Similarity=-0.021 Sum_probs=128.6
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCC-CCCc-C--CCceEEEEe
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDA-SPPL-R--EGRAFGVQT 83 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~-~~~~-~--~~~v~~~~t 83 (218)
++|||++|. +++++++.|.++...+. + . .|+++.|+++||+++++++.. +. .... . +++| ++|
T Consensus 101 ~~i~l~~g~-----p~~~~~~~v~e~~~~~~---~-~-~Y~~~~g~~~lreaia~~~~~-~~~~~~~~~~~~~~I--~vT 167 (527)
T PRK09275 101 DAVSYVRDQ-----LGFDADEFVYELVDGII---G-D-NYPVPDRMLKHTEKIVKDYLR-QEMCGGRPPKGEFDL--FAV 167 (527)
T ss_pred HHHhhcCCC-----CCCCCCHHHHHHHHHHh---c-C-CCCCCCCCHHHHHHHHHHHHH-hhccCCCCCCCcCeE--EEe
Confidence 679999995 34677999999665553 2 2 499999999999999996643 31 1111 2 2344 699
Q ss_pred ccChhHHHHHHHHHH---HhcCCCeEEecCCCchhHHHHHHHhCCCcceeEec--cCCcCccccHHHHHHHHhcCCCCcE
Q psy6266 84 LSGTGALRVGAEFLH---RILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRY--WNPEKRAVDFTGMYEDLVNAPDNSV 158 (218)
Q Consensus 84 ~G~~~al~~~~~~l~---~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~--~~~~~~~~d~~~~~~~l~~~~~~~~ 158 (218)
.|+++|+..+++++. .++|||+|++++|+|+.|..++++.|+ .++.+++ ..++.+.+|.+.+++.+. ++++
T Consensus 168 ~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~-~~~~v~v~~~~~~~f~~d~~~l~~~~~---~~tk 243 (527)
T PRK09275 168 EGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRY-DLEVVHINADEENEWQYPDSELEKLRD---PSIK 243 (527)
T ss_pred CCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCC-CeEEEEeecCcccCCCCCHHHHHhhcC---CCCC
Confidence 999999999888642 278999999999999999999988865 5544444 223446778888877553 4455
Q ss_pred EEEcccCCCCcHH--------HHHHHhhc--CeEEEeeCCceeeccCCC
Q psy6266 159 IILHACAHNPTAQ--------QVAHMVDK--HHVYLLRSGRINMCGLTT 197 (218)
Q Consensus 159 iil~~~p~NPTG~--------~l~~l~~~--~~i~ii~D~r~~y~~l~~ 197 (218)
+++.++||||||. +|+++|++ ++++||+| ++|..+.+
T Consensus 244 ai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~D--EvY~~f~~ 290 (527)
T PRK09275 244 ALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITD--DVYGTFVD 290 (527)
T ss_pred EEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEEC--CCChhhcc
Confidence 5555789999997 68888854 59999999 99999875
No 45
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.1e-24 Score=193.12 Aligned_cols=177 Identities=11% Similarity=0.026 Sum_probs=141.0
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEec
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTL 84 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~ 84 (218)
.|..+|||++|.+ .+++++.++++..++... ...+|.+..|.++||+++++++.. ..+..+.+++| ++|.
T Consensus 31 ~~~~~i~l~~g~p-----~~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~l~~-~~g~~~~~~~i--~~t~ 100 (402)
T PRK06107 31 AGRSIVDLTVGEP-----DFDTPDHIKQAAVAAIER--GETKYTLVNGTPALRKAIIAKLER-RNGLHYADNEI--TVGG 100 (402)
T ss_pred ccCCEEEcCCCCC-----CCCCCHHHHHHHHHHHHc--CCCCCCCCCCCHHHHHHHHHHHHH-hcCCCCChhhE--EEeC
Confidence 4678899999962 345578888888887753 346799999999999999999854 44444566765 5999
Q ss_pred cChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 85 SGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 85 G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
|+++|+.++++++ +++||+|++++|+|+.|...+...++ .++.+++..++.+.+|++.+++.+. ++..+++.++
T Consensus 101 G~~~al~~~~~~~--~~~gd~vl~~~p~y~~y~~~~~~~~~-~~~~v~~~~~~~~~~~~~~l~~~~~---~~~~~v~l~~ 174 (402)
T PRK06107 101 GAKQAIFLALMAT--LEAGDEVIIPAPYWVSYPDMVLANDG-TPVIVACPEEQGFKLTPEALEAAIT---PRTRWLILNA 174 (402)
T ss_pred CHHHHHHHHHHHh--cCCCCEEEEecCCCcCHHHHHHHcCC-EEEEecCCcccCCCCCHHHHHhhcC---cCceEEEEEC
Confidence 9999999998766 68999999999999999999999998 8888876323345678888888774 3344445568
Q ss_pred CCCCcHH--------HHHHHhhcC-eEEEeeCCceeeccCCCCC
Q psy6266 165 AHNPTAQ--------QVAHMVDKH-HVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 165 p~NPTG~--------~l~~l~~~~-~i~ii~D~r~~y~~l~~~n 199 (218)
||||||. +++++|++| ++++|+| ++|..+.|++
T Consensus 175 p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~D--e~y~~l~~~~ 216 (402)
T PRK06107 175 PSNPTGAVYSRAELRALADVLLRHPHVLVLTD--DIYDHIRFDD 216 (402)
T ss_pred CCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEe--hhccccccCC
Confidence 9999996 688889997 9999999 9999887753
No 46
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.92 E-value=1.3e-24 Score=189.26 Aligned_cols=172 Identities=14% Similarity=0.100 Sum_probs=138.9
Q ss_pred eeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCC-ceEEEEeccCh
Q psy6266 9 HCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG-RAFGVQTLSGT 87 (218)
Q Consensus 9 ~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~-~v~~~~t~G~~ 87 (218)
+|+|+.|. +.+++++.+++++++... ...+|.+..|.++||+++++++.. ..+..++++ +| ++|.|++
T Consensus 2 ~~~~~~g~-----p~~~~~~~~~~~~~~~~~---~~~~Y~~~~G~~~lr~aia~~~~~-~~g~~~~~~~~I--iit~Gs~ 70 (350)
T TIGR03537 2 LFDFGTGD-----PKEPTPPFIRKALIDAVP---EVSQYPSALGTKALREAISGWFER-RFGVKLDPDAQV--LPSAGSK 70 (350)
T ss_pred eEeccCCC-----CCCCCCHHHHHHHHHHHh---ccCCCCCCCCCHHHHHHHHHHHHH-HhCCCCCCCCcE--EEcCChH
Confidence 68999995 235668889988877653 356799999999999999999865 544446665 65 5999999
Q ss_pred hHHHHHHHHHHHhcCC---CeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 88 GALRVGAEFLHRILNY---TTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 88 ~al~~~~~~l~~l~~g---d~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
+++.++++++ +++| |+|++++|+|+.|...++..|+ +++.+++..++.+.+|++.+++++.+ ++.+++.++
T Consensus 71 ~ai~~~~~~~--~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~-~~~~v~~~~~~~~~~d~~~l~~~~~~---~~~~i~i~~ 144 (350)
T TIGR03537 71 EAIFHFPLVF--IDPEEDRRRVIFGTPGYPVYERGALFAGG-EPTAVKLKKEDGFLLRLEKVEKSILE---ETKIVWINY 144 (350)
T ss_pred HHHHHHHHHH--cCCCCCCceEEEcCCCCcchHHHHHhcCC-EEEEcccCcccCCccCHHHHHHhhhh---ccEEEEEeC
Confidence 9999998876 5677 6999999999999999999999 99999874334456799999887753 344555567
Q ss_pred CCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 165 AHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 165 p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
||||||. +|.++|++++++||+| ++|..+.++.
T Consensus 145 p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~D--e~y~~~~~~~ 185 (350)
T TIGR03537 145 PHNPTGATAPRSYLKETIAMCREHGIILCSD--ECYTEIYFGE 185 (350)
T ss_pred CCCCcCcccCHHHHHHHHHHHHHcCcEEEEe--ccccccccCC
Confidence 9999996 6888899999999999 9998876653
No 47
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.92 E-value=1.5e-24 Score=190.36 Aligned_cols=174 Identities=16% Similarity=0.076 Sum_probs=141.6
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccC
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSG 86 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~ 86 (218)
..+|+|++|. +++++++.++++..+.+.+ ....|.+..|.++||+++++++.. ..+..+++++| ++|.|+
T Consensus 24 ~~~i~l~~g~-----~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~la~~~~~-~~~~~~~~~~i--~~t~g~ 93 (382)
T PRK06108 24 EGVLPLWFGE-----SDLPTPDFIRDAAAAALAD--GETFYTHNLGIPELREALARYVSR-LHGVATPPERI--AVTSSG 93 (382)
T ss_pred CCeEEecCCC-----CCCCCCHHHHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHHHH-HhCCCcCcceE--EEeCCh
Confidence 3689999995 3356788999998877754 345699999999999999999854 44434666775 589999
Q ss_pred hhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCC-cCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 87 TGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP-EKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 87 ~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
++++.+++.++ ++|||+|++++|+|+.|...++..|+ +++.+++... +.+.+|++.+++.+. +++.+++.++|
T Consensus 94 ~~al~~~~~~l--~~~gd~vl~~~p~y~~~~~~~~~~g~-~~~~v~~~~~~~~~~~d~~~l~~~~~---~~~~~i~l~~p 167 (382)
T PRK06108 94 VQALMLAAQAL--VGPGDEVVAVTPLWPNLVAAPKILGA-RVVCVPLDFGGGGWTLDLDRLLAAIT---PRTRALFINSP 167 (382)
T ss_pred HHHHHHHHHHh--cCCCCEEEEeCCCccchHHHHHHCCC-EEEEeeCCCCCCCccCCHHHHHHhcC---ccceEEEEECC
Confidence 99999998877 67999999999999999999999999 8999988432 235679999988774 34445555689
Q ss_pred CCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 166 HNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 166 ~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
|||||. +|.++|+++++++|.| ++|.++.++
T Consensus 168 ~NPtG~~~~~~~~~~l~~~~~~~~~~li~D--e~y~~~~~~ 206 (382)
T PRK06108 168 NNPTGWTASRDDLRAILAHCRRHGLWIVAD--EVYERLYYA 206 (382)
T ss_pred CCCCCcccCHHHHHHHHHHHHHCCcEEEEe--hhhhhhccC
Confidence 999996 6889999999999999 999998775
No 48
>PRK07550 hypothetical protein; Provisional
Probab=99.92 E-value=1.9e-24 Score=190.38 Aligned_cols=178 Identities=15% Similarity=0.043 Sum_probs=141.9
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
++|...|+|+.|.+ +..+++.+.++..++..+ .....|.+..|.++||+++++++.. ..+..+++++| ++|
T Consensus 26 ~~~~~~i~l~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~-~~g~~~~~~~i--~~t 96 (386)
T PRK07550 26 GADGPLIDLSQAVP-----GYPPPPELLRALAEAAAD-PAAHLYGPVEGLPELREAYAAHYSR-LYGAAISPEQV--HIT 96 (386)
T ss_pred hcCCCeEEeCCCCC-----CCCCCHHHHHHHHHHHhC-cCCcCCCCCCCCHHHHHHHHHHHHH-HhCCCCCcceE--EEe
Confidence 35678999999952 234578888887776543 2456799999999999999999865 54444667775 589
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcc
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~ 163 (218)
.|+++|+.+++.++ +.|||+|++++|+|+.|..+++..|+ +++.+++..++.+.+|.+.+++.+.. ++.+++..
T Consensus 97 ~G~~~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~g~-~~~~v~~~~~~~~~~~~~~l~~~~~~---~~~~v~~~ 170 (386)
T PRK07550 97 SGCNQAFWAAMVTL--AGAGDEVILPLPWYFNHKMWLDMLGI-RPVYLPCDEGPGLLPDPAAAEALITP---RTRAIALV 170 (386)
T ss_pred cCcHHHHHHHHHHh--cCCCCEEEEcCCCCcchHHHHHhcCC-EEEEEecCCCcCCCCCHHHHHHHhcc---cCcEEEEe
Confidence 99999999998887 67999999999999999999999999 99999985334455688888887753 23333335
Q ss_pred cCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 164 CAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 164 ~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
+||||||. +|.++|++|+++||+| ++|.++.++
T Consensus 171 ~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~D--d~y~~~~~~ 211 (386)
T PRK07550 171 TPNNPTGVVYPPELLHELYDLARRHGIALILD--ETYRDFDSG 211 (386)
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHcCeEEEEe--ccchhhccC
Confidence 79999996 6889999999999999 999988654
No 49
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.92 E-value=2.3e-24 Score=190.39 Aligned_cols=176 Identities=14% Similarity=0.096 Sum_probs=141.6
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCC-CceEEEEecc
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLRE-GRAFGVQTLS 85 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~-~~v~~~~t~G 85 (218)
..+|+|+.|.+ ++.+++.++++..+.... ....|.|..|.++||+++++++.. .++..+.+ ++| ++|.|
T Consensus 30 ~~~i~l~~~~~-----~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~-~~~~~~~~~~~i--~it~G 99 (391)
T PRK07309 30 PGILKLTLGEP-----DFTTPDHVKEAAKRAIDA--NQSHYTGMAGLLELRQAAADFVKE-KYNLDYAPENEI--LVTIG 99 (391)
T ss_pred CCeEEcCCCCC-----CCCCCHHHHHHHHHHHhc--CCCCCCCCCCcHHHHHHHHHHHHH-HhCCCCCCCCcE--EEeCC
Confidence 56899999962 245678888888776643 345699999999999999999965 54443443 555 59999
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
+++|+.++++++ +.+||+|++++|+|+.|..+++..|+ +++.++. +.+.+.+|++.+++.+.+.+++..+++.++|
T Consensus 100 ~~~al~~~~~~~--~~~gd~vl~~~p~y~~~~~~~~~~g~-~~~~~~~-~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P 175 (391)
T PRK07309 100 ATEALSASLTAI--LEPGDKVLLPAPAYPGYEPIVNLVGA-EIVEIDT-TENDFVLTPEMLEKAILEQGDKLKAVILNYP 175 (391)
T ss_pred hHHHHHHHHHHh--cCCCCEEEEeCCCCcchHHHHHHcCC-EEEEEec-CCcCCcCCHHHHHHHhhccCCCeEEEEEECC
Confidence 999999998876 67999999999999999999999999 8988886 2334568999999888653334445555689
Q ss_pred CCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 166 HNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 166 ~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
|||||. +|.++|++|++++|.| ++|..+.++
T Consensus 176 ~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D--~~y~~~~~~ 214 (391)
T PRK07309 176 ANPTGVTYSREQIKALADVLKKYDIFVISD--EVYSELTYT 214 (391)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHcCcEEEEE--ccccceeeC
Confidence 999996 6888999999999999 999998874
No 50
>PRK09265 aminotransferase AlaT; Validated
Probab=99.92 E-value=2.7e-24 Score=190.68 Aligned_cols=179 Identities=10% Similarity=0.015 Sum_probs=141.0
Q ss_pred CCCCceeeeeeeEEeCCCC-CccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEEC-KPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~-~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
..|..+|+|++|.+ +. .+++++.+.++..+... ...+|.+..|.++||+++++++.. .+...+++++| ++
T Consensus 30 ~~~~~~i~l~~g~p---~~~~~~~~~~i~~~~~~~~~---~~~~Y~~~~G~~~lr~~ia~~~~~-~~~~~~~~~~i--~~ 100 (404)
T PRK09265 30 EEGHKILKLNIGNP---APFGFEAPDEILRDVIRNLP---TAQGYSDSKGLFSARKAIMQYYQQ-KGIPDVDVDDI--YI 100 (404)
T ss_pred HcCCCeEEecCCCC---CcCCCCCCHHHHHHHHHHhh---cCCCCCCCCCcHHHHHHHHHHHhc-cCCCCCCcccE--EE
Confidence 35789999999963 22 23467778777665443 246799999999999999999965 54434667776 58
Q ss_pred eccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEc
Q psy6266 83 TLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILH 162 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~ 162 (218)
|.|+++++.++++++ ++|||+|++++|+|+.|...++..|+ +++.++...++.+.+|++.+++.+. +++.+++.
T Consensus 101 t~G~~~~l~~~~~~~--~~~gd~Vlv~~p~y~~~~~~~~~~g~-~~v~~~~~~~~~~~~d~~~l~~~~~---~~~~~v~l 174 (404)
T PRK09265 101 GNGVSELIVMAMQAL--LNNGDEVLVPAPDYPLWTAAVSLSGG-KPVHYLCDEEAGWFPDLDDIRSKIT---PRTKAIVI 174 (404)
T ss_pred eCChHHHHHHHHHHh--CCCCCEEEEeCCCCcChHHHHHHcCC-EEEEEecccccCCCCCHHHHHHhcc---ccceEEEE
Confidence 999999999988877 67999999999999999999999998 8888876323345678888888774 23444555
Q ss_pred ccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 163 ACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 163 ~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
++||||||. +|.++|++++++||+| ++|.++.+++
T Consensus 175 ~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~D--e~y~~~~~~~ 217 (404)
T PRK09265 175 INPNNPTGAVYSKELLEEIVEIARQHNLIIFAD--EIYDKILYDG 217 (404)
T ss_pred ECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEe--hhhhhccCCC
Confidence 689999996 6888899999999999 9999988753
No 51
>PRK05839 hypothetical protein; Provisional
Probab=99.92 E-value=2.5e-24 Score=189.18 Aligned_cols=172 Identities=14% Similarity=0.092 Sum_probs=133.3
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEecc
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLS 85 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G 85 (218)
|..+|+|++|.+ .+++++.++++..+... ....|.+..|.++||+++++++.. .++..+++++| ++|.|
T Consensus 23 ~~~~i~l~~~~p-----~~~~~~~~~~a~~~~~~---~~~~Y~~~~G~~~lr~aia~~l~~-~~g~~~~~~~I--~it~G 91 (374)
T PRK05839 23 EYKGLDLTIGEP-----QFETPKFIQDALKNNAH---LLNKYPKSAGEESLREAQRGFFKR-RFKIELKENEL--IPTFG 91 (374)
T ss_pred CCCeEEcCCCCC-----CCCCCHHHHHHHHHHhh---ccCCCCCCCCCHHHHHHHHHHHHH-HhCCCCCcceE--EEecC
Confidence 669999999952 34567888888776542 356799999999999999999865 54544677876 59999
Q ss_pred ChhHHHHHHHHHHHh-cCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 86 GTGALRVGAEFLHRI-LNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 86 ~~~al~~~~~~l~~l-~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
+++++.++++++. . .+||.|++++|+|+.|...++..|+ +++.+++..++.+.+|+... .+. +..+++.++
T Consensus 92 ~~~al~~~~~~~~-~~~~gd~vlv~~P~y~~~~~~~~~~g~-~v~~v~~~~~~~~~~d~~~~--~~~----~~k~v~i~n 163 (374)
T PRK05839 92 TREVLFNFPQFVL-FDKQNPTIAYPNPFYQIYEGAAIASRA-KVLLMPLTKENDFTPSLNEK--ELQ----EVDLVILNS 163 (374)
T ss_pred cHHHHHHHHHHHh-cCCCCCEEEECCCCchhhHHHHHhcCC-EEEEeecccccCCcCCcchh--hhc----cccEEEEeC
Confidence 9999998877652 2 3699999999999999999999999 99999874333344454332 232 233444469
Q ss_pred CCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 165 AHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 165 p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
||||||. +|+++|++++++||+| |+|.++.++
T Consensus 164 P~NPTG~~~s~~~l~~i~~~~~~~~~~ii~D--E~Y~~~~~~ 203 (374)
T PRK05839 164 PNNPTGRTLSLEELIEWVKLALKHDFILIND--ECYSEIYEN 203 (374)
T ss_pred CCCCcCcccCHHHHHHHHHHHHHcCCEEEec--cchhhcccC
Confidence 9999998 6888899999999999 999998654
No 52
>PRK09082 methionine aminotransferase; Validated
Probab=99.92 E-value=3.3e-24 Score=188.99 Aligned_cols=174 Identities=14% Similarity=0.098 Sum_probs=139.8
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCC-ceEEEEec
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG-RAFGVQTL 84 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~-~v~~~~t~ 84 (218)
++.+|||++|. ++ +++++.+.++.++..+. ...+|.+..|.++||+++++++.. ..+....++ +| ++|.
T Consensus 29 ~~~~i~l~~g~---~~--~~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~~a~~l~~-~~~~~~~~~~~i--~~t~ 98 (386)
T PRK09082 29 EHGAINLSQGF---PD--FDGPPYLVEALAYAMAA--GHNQYPPMTGVAALREAIAAKTAR-LYGRQYDADSEI--TVTA 98 (386)
T ss_pred hCCEEEecCCC---CC--CCCCHHHHHHHHHHHHc--CCCCCCCCCCcHHHHHHHHHHHHH-HhCCCCCCCCcE--EEeC
Confidence 45789999995 23 34577888887777643 356799999999999999998754 433334443 44 5899
Q ss_pred cChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 85 SGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 85 G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
|+++|+.+++.++ ++|||+|++++|+|++|...++..|+ +++.++.. .+.+.+|++.+++.+. ++..+++.++
T Consensus 99 G~~~al~~~~~~~--~~~gd~Vli~~p~y~~~~~~~~~~g~-~~~~~~~~-~~~~~~d~~~l~~~~~---~~~~~v~l~~ 171 (386)
T PRK09082 99 GATEALFAAILAL--VRPGDEVIVFDPSYDSYAPAIELAGG-RAVRVALQ-PPDFRVDWQRFAAAIS---PRTRLIILNT 171 (386)
T ss_pred CHHHHHHHHHHHH--cCCCCEEEEeCCCchhhHHHHHHcCC-EEEEEecC-cccccCCHHHHHHhcC---ccceEEEEeC
Confidence 9999999988876 68999999999999999999999999 99999883 3356789999988875 2344455578
Q ss_pred CCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 165 AHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 165 p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
||||||. +|.++|++|++++|.| ++|.++.++
T Consensus 172 p~NPtG~~~~~~~~~~i~~~a~~~~i~li~D--e~y~~~~~~ 211 (386)
T PRK09082 172 PHNPSGTVWSAADMRALWQLIAGTDIYVLSD--EVYEHIVFD 211 (386)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHCCEEEEEe--hhhhhhccC
Confidence 9999995 7889999999999999 999988875
No 53
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.92 E-value=3.6e-24 Score=189.03 Aligned_cols=174 Identities=13% Similarity=0.046 Sum_probs=140.5
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccC
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSG 86 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~ 86 (218)
..+|||++|. +++++++.++++.+++..+ ....|.|..|.++||+++++++.. ..+..+++++| ++|.|+
T Consensus 33 ~~~i~l~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~-~~g~~~~~~~i--~~t~G~ 102 (391)
T PRK08361 33 ENVISLGIGE-----PDFDTPKNIKEAAKRALDE--GWTHYTPNAGIPELREAIAEYYKK-FYGVDVDVDNV--IVTAGA 102 (391)
T ss_pred cCeEEcCCCC-----CCCCCCHHHHHHHHHHHhc--CCCCCCCCCCcHHHHHHHHHHHHH-HhCCCCCcccE--EEeCCh
Confidence 4689999995 2344578889888877653 345799999999999999999854 33333666765 599999
Q ss_pred hhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCC
Q psy6266 87 TGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAH 166 (218)
Q Consensus 87 ~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~ 166 (218)
++++.++++++ +.|||+|++++|+|++|...++..|+ +++.+++..+..+.+|++.+++.+.. ++.+++.++||
T Consensus 103 ~~al~~~~~~l--~~~g~~Vlv~~p~y~~~~~~~~~~g~-~~~~v~~~~~~~~~~d~~~l~~~i~~---~~~~v~i~~p~ 176 (391)
T PRK08361 103 YEATYLAFESL--LEEGDEVIIPDPAFVCYVEDAKIAEA-KPIRIPLREENEFQPDPDELLELITK---RTRMIVINYPN 176 (391)
T ss_pred HHHHHHHHHHh--cCCCCEEEEcCCCCcccHHHHHHcCC-EEEEEecCCccCCCCCHHHHHHhccc---ccEEEEEeCCC
Confidence 99999998877 67999999999999999999999999 89999885433467899999888753 33445556899
Q ss_pred CCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 167 NPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 167 NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
||||. +|.++|++++++||.| ++|.++.++
T Consensus 177 NPtG~~~~~~~~~~l~~~~~~~~~~ii~D--e~y~~~~~~ 214 (391)
T PRK08361 177 NPTGATLDKEVAKAIADIAEDYNIYILSD--EPYEHFLYE 214 (391)
T ss_pred CCCCcCcCHHHHHHHHHHHHHcCeEEEEE--cccccceeC
Confidence 99997 6888899999999999 999988765
No 54
>PRK08175 aminotransferase; Validated
Probab=99.92 E-value=4.7e-24 Score=188.58 Aligned_cols=177 Identities=15% Similarity=0.133 Sum_probs=137.4
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCC-ceEEEEe
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG-RAFGVQT 83 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~-~v~~~~t 83 (218)
.|..+|+|+.|. +++ .+++.+.++..+...+ ....+|.+..|.++||+++++++.. .++...+++ ++ ++|
T Consensus 27 ~~~~~i~l~~g~---p~~--~~~~~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~~~~-~~g~~~~~~~~i--~~t 97 (395)
T PRK08175 27 RGEDIIDFSMGN---PDG--PTPPHIVEKLCEVAQR-PDTHGYSTSRGIPRLRRAISRWYQD-RYDVDIDPESEA--IVT 97 (395)
T ss_pred cCCCeEEcCCCC---CCC--CCCHHHHHHHHHHHhC-CCcCCCCCCCCCHHHHHHHHHHHHH-HhCCCCCCCCcE--EEc
Confidence 477899999995 454 3466677666555433 2457899999999999999999865 544445555 44 599
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcc
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~ 163 (218)
.|+++++.++++++ ++|||+|++++|+|+.|...++..|+ +++.+++. .+ +.+++.+++.+++..+++.+++.+
T Consensus 98 ~G~~~~l~~~~~~~--~~~gd~Vlv~~P~y~~~~~~~~~~g~-~~~~v~~~-~~--~~~~~~l~~~l~~~~~~~~~v~i~ 171 (395)
T PRK08175 98 IGSKEGLAHLMLAT--LDHGDTVLVPNPSYPIHIYGAVIAGA-QVRSVPLV-EG--VDFFNELERAIRESYPKPKMMILG 171 (395)
T ss_pred cCcHHHHHHHHHHh--CCCCCEEEEcCCCCcchHHHHHHcCC-eEEEEecc-cC--CCcHHHHHHHHhhccCCceEEEEe
Confidence 99999999988776 68999999999999999999999999 89888873 22 224666777675432344555556
Q ss_pred cCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 164 CAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 164 ~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
+||||||. +|.++|++|+++||.| ++|.++.++
T Consensus 172 ~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~D--e~y~~l~~~ 212 (395)
T PRK08175 172 FPSNPTAQCVELEFFEKVVALAKRYDVLVVHD--LAYADIVYD 212 (395)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEe--cchHhhccC
Confidence 89999996 6889999999999999 999988775
No 55
>PRK07683 aminotransferase A; Validated
Probab=99.92 E-value=4.9e-24 Score=188.09 Aligned_cols=173 Identities=11% Similarity=0.102 Sum_probs=140.7
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCC-ceEEEEecc
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG-RAFGVQTLS 85 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~-~v~~~~t~G 85 (218)
..+|+|++|. +.+++++.++++..++... ....|.+..|.++||+++++++.. +++..++++ +| ++|.|
T Consensus 28 ~~~i~l~~~~-----p~~~~~~~~~~a~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~-~~g~~~~~~~~I--~~t~G 97 (387)
T PRK07683 28 DNLISLTIGQ-----PDFPTPSHVKEAAKRAITE--NYTSYTHNAGLLELRKAACNFVKD-KYDLHYSPESEI--IVTIG 97 (387)
T ss_pred CCeEEecCCC-----CCCCCCHHHHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHHHH-HhCCCCCCCCcE--EEeCC
Confidence 5679999995 2345678889988887753 356799999999999999999965 444445666 65 59999
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
+++|+.++++++ +.+||+|++++|+|++|...++..|+ +++.++.. .+.+.+|.+.+++.+.. ++.+++.++|
T Consensus 98 ~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~-~~~~~~~~-~~~~~~~~~~l~~~~~~---~~~~i~i~~p 170 (387)
T PRK07683 98 ASEAIDIAFRTI--LEPGTEVILPAPIYPGYEPIIRLCGA-KPVFIDTR-STGFRLTAEALENAITE---KTRCVVLPYP 170 (387)
T ss_pred hHHHHHHHHHHh--CCCCCEEEEcCCCccchHHHHHHcCC-EEEEeecC-cccCCCCHHHHHHhcCc---CceEEEEeCC
Confidence 999999998876 67999999999999999999999999 89988773 34455677888877743 3445556799
Q ss_pred CCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 166 HNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 166 ~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
|||||. +|.++|++++++||.| ++|..+.++
T Consensus 171 ~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D--e~y~~~~~~ 209 (387)
T PRK07683 171 SNPTGVTLSKEELQDIADVLKDKNIFVLSD--EIYSELVYE 209 (387)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCeEEEEe--cccccceeC
Confidence 999998 6889999999999999 999998775
No 56
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.92 E-value=4.9e-24 Score=188.99 Aligned_cols=183 Identities=15% Similarity=0.115 Sum_probs=146.4
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
.+|.++|+|++|.+. ..+++++++.+.++..+.+.. .....|.+..|.++||+++++++.. ..+..+.+++| ++|
T Consensus 28 ~~~~~~i~l~~g~p~-~~~~~~~~~~~~~~~~~~l~~-~~~~~Y~~~~g~~~lr~~ia~~l~~-~~~~~~~~~~i--i~t 102 (403)
T TIGR01265 28 NPEKPIIPLSHGDPS-VFGNLRTDPEAEEAVKDALRS-GKFNGYAPSVGALAAREAVAEYLSS-DLPGKLTADDV--VLT 102 (403)
T ss_pred hcCCCeEEeCCCCCC-ccCCCCCCHHHHHHHHHHHhc-CCCCCCCCCCCCHHHHHHHHHHHHh-hcCCCCCHHHE--EEe
Confidence 358899999999631 124567788899988776643 2335799999999999999999865 44444566775 599
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcc
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~ 163 (218)
.|+++|+.++++++ +.+||+|++++|+|+.|...++..|+ +++.++....+.+++|++.+++.+.. ++.+++.+
T Consensus 103 ~G~t~al~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~v~i~ 176 (403)
T TIGR01265 103 SGCSQAIEICIEAL--ANPGANILVPRPGFPLYDTRAAFSGL-EVRLYDLLPEKDWEIDLDGLEALADE---KTVAIVVI 176 (403)
T ss_pred cChHHHHHHHHHHh--CCCCCEEEEeCCCchhHHHHHHHcCC-EEEEecCCcccCCccCHHHHHHHhCc---CccEEEEe
Confidence 99999999999987 57999999999999999999999999 88888774333467899999887743 34445556
Q ss_pred cCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 164 CAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 164 ~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
+||||||. +|.++|+++++++|.| ++|.++.++.
T Consensus 177 ~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~D--e~y~~~~~~~ 218 (403)
T TIGR01265 177 NPSNPCGSVFSRDHLQKIAEVARKLGIPIIAD--EIYGHMVFGD 218 (403)
T ss_pred cCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEE--ccccccccCC
Confidence 89999996 6888999999999999 9999998764
No 57
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.92 E-value=2.8e-24 Score=192.06 Aligned_cols=169 Identities=17% Similarity=0.106 Sum_probs=135.1
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEecc
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLS 85 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G 85 (218)
+..+++|+.|. ++ +++++.+.++..+... ....|.+..|.++||+++++++.. .. ..+++| ++|.|
T Consensus 84 ~~~~i~L~~g~---p~--~~~~p~~~~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~~-~~---~~~~~I--iit~G 149 (431)
T PRK15481 84 GTPLHDLAGGN---PD--PQRLPDLSRYFARLSR---TPRLYGDAPVSPELHAWAARWLRD-DC---PVAFEI--DLTSG 149 (431)
T ss_pred cchhhhhhcCC---CC--hhHhHHHHHHHHHhhh---hhhhcCCcCCCHHHHHHHHHHHhh-cc---CCcCeE--EEecC
Confidence 34678999994 33 3455667777766543 245799999999999999999753 21 123454 69999
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
+++++.++++++ ++|||+|++++|+|+.|...++..|+ +++.+++. + .++|++.+++.+.. ..+.++++++|
T Consensus 150 ~~~al~~~~~~l--~~pgd~Vlv~~P~y~~~~~~~~~~g~-~~~~v~~~-~--~g~~~~~l~~~~~~--~~k~i~~~p~p 221 (431)
T PRK15481 150 AIDAIERLLCAH--LLPGDSVAVEDPCFLSSINMLRYAGF-SASPVSVD-A--EGMQPEKLERALAQ--GARAVILTPRA 221 (431)
T ss_pred cHHHHHHHHHHh--CCCCCEEEEeCCCcHHHHHHHHHcCC-eEEeeccC-C--CCCCHHHHHHHHhc--CCCEEEECCCC
Confidence 999999999887 68999999999999999999999999 99999873 3 35899999888853 23455666699
Q ss_pred CCCcHH--------HHHHHhhcC-eEEEeeCCceeeccCCCC
Q psy6266 166 HNPTAQ--------QVAHMVDKH-HVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 166 ~NPTG~--------~l~~l~~~~-~i~ii~D~r~~y~~l~~~ 198 (218)
|||||. +|.++|+++ +++||+| ++|.+|.++
T Consensus 222 ~NPTG~~~s~~~~~~l~~la~~~~~~~ii~D--e~Y~~~~~~ 261 (431)
T PRK15481 222 HNPTGCSLSARRAAALRNLLARYPQVLVIID--DHFALLSSS 261 (431)
T ss_pred CCCCCccCCHHHHHHHHHHHHhcCCceEEec--CchhhhccC
Confidence 999997 788999998 9999999 999988764
No 58
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1.4e-23 Score=185.29 Aligned_cols=174 Identities=17% Similarity=0.144 Sum_probs=140.0
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcC-CCceEEEEecc
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLR-EGRAFGVQTLS 85 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~-~~~v~~~~t~G 85 (218)
..+|+|++|.+ ++++++.+++|..+.... .....|.+..|.++||+++++++.. ..+.... +++| ++|.|
T Consensus 27 ~~~~~l~~g~~-----~~~~~~~~~~a~~~~~~~-~~~~~Y~~~~G~~~lr~~~~~~l~~-~~g~~~~~~~~i--~~t~G 97 (389)
T PRK05957 27 PGTISLGQGVV-----SYPPPPEAIEALNNFLAN-PENHKYQAVQGIPPLLEAITQKLQQ-DNGIELNNEQAI--VVTAG 97 (389)
T ss_pred CCeEEccCCCC-----CCCCCHHHHHHHHHHHhC-CCCCCCCCCCCCHHHHHHHHHHHHH-HhCCCCCCCCeE--EEeCC
Confidence 46799999962 256788899988776643 2346799999999999999999854 4333334 4554 58999
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
+++++..+++++ ++|||+|++++|+|+.|...++..|+ +++.++. .+.+++|++.+++.+.. ++.+++.++|
T Consensus 98 ~~~~l~~~~~~~--~~~gd~Vlv~~P~y~~~~~~~~~~g~-~~~~v~~--~~~~~~d~~~l~~~i~~---~~klv~~~~p 169 (389)
T PRK05957 98 SNMAFMNAILAI--TDPGDEIILNTPYYFNHEMAITMAGC-QPILVPT--DDNYQLQPEAIEQAITP---KTRAIVTISP 169 (389)
T ss_pred hHHHHHHHHHHh--cCCCCEEEEeCCCCcCHHHHHHhcCC-EEEEeec--CCCCCcCHHHHHHhcCc---CceEEEEeCC
Confidence 999999888876 67999999999999999999999999 8999886 33467899999988853 3445555789
Q ss_pred CCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 166 HNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 166 ~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
|||||. +|.++|+++++++|+| ++|.++.+++
T Consensus 170 ~NPtG~~~~~~~~~~i~~~a~~~~~~li~D--e~y~~~~~~~ 209 (389)
T PRK05957 170 NNPTGVVYPEALLRAVNQICAEHGIYHISD--EAYEYFTYDG 209 (389)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHcCcEEEEe--ccchhccCCC
Confidence 999996 6888999999999999 9999998874
No 59
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.4e-23 Score=183.78 Aligned_cols=174 Identities=11% Similarity=0.038 Sum_probs=137.9
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhc-CCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccC
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKELAAD-DSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSG 86 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~ 86 (218)
..|+|++|. .++++++.+++++.+.+.+ ....+.| |..|.++||+++++++.. .++..+++++| ++|.|+
T Consensus 27 ~~i~l~~~~-----~~~~~~~~~~~al~~~l~~~~~~~~~Y-~~~g~~~lr~aia~~~~~-~~~~~~~~~~I--~it~G~ 97 (368)
T PRK03317 27 VPVRLNTNE-----NPYPPSPALVADIAEAVAEAAAGLNRY-PDRDAVALRADLAAYLTA-QTGVGLTVENV--WAANGS 97 (368)
T ss_pred ceeEecCCC-----CCCCCCHHHHHHHHHHHhhhhhhhccC-CCCchHHHHHHHHHHhhh-hccCCCChhhE--EECCCH
Confidence 458999995 2357788999988776532 1234678 457999999999999966 55545677776 599999
Q ss_pred hhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCC
Q psy6266 87 TGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAH 166 (218)
Q Consensus 87 ~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~ 166 (218)
++++.++++++ ++|||+|+++.|+|+.|...++..|. +++.++. .+.+++|++.+++.+.+. +..+++.++||
T Consensus 98 ~~~l~~~~~~~--~~~gd~v~v~~P~y~~~~~~~~~~g~-~~~~~~~--~~~~~~d~~~l~~~~~~~--~~~~i~l~~p~ 170 (368)
T PRK03317 98 NEILQQLLQAF--GGPGRTALGFVPSYSMHPIIARGTHT-EWVEGPR--AADFTLDVDAAVAAIAEH--RPDVVFLTSPN 170 (368)
T ss_pred HHHHHHHHHHh--cCCCCEEEEeCCChHHHHHHHHhcCC-eeEEccc--CCCCCCCHHHHHHHHhcc--CCCEEEEeCCC
Confidence 99999999887 68999999999999999999999988 7877765 335688999999888642 23334446899
Q ss_pred CCcHH-----HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 167 NPTAQ-----QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 167 NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
||||. ++.++++..++++|+| |+|.++.+..
T Consensus 171 NPtG~~~~~~~l~~l~~~~~~~lI~D--E~y~~~~~~~ 206 (368)
T PRK03317 171 NPTGTALPLDDVEAILDAAPGIVVVD--EAYAEFRRSG 206 (368)
T ss_pred CCCCCCCCHHHHHHHHHHCCceEEEe--CCchhhcccC
Confidence 99998 7888888778999999 9999986543
No 60
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.91 E-value=5.7e-24 Score=192.11 Aligned_cols=180 Identities=11% Similarity=0.021 Sum_probs=135.8
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhc----------CCCCccCcCCCCcHHHHHHHHHHhcCCCCC--CCc
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAAD----------DSLNHEYLPVLGLESFSSAATRMLLGGDAS--PPL 73 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~----------~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~--~~~ 73 (218)
..-+|+|+++. +. ...+.+.+..+..... ......|.+..|.++||+++++++.. ..+ ..+
T Consensus 37 p~g~i~L~~~E----n~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~-~~~~~~~v 109 (468)
T PLN02450 37 PSGIIQMGLAE----NQ--LSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSE-IRGNKVTF 109 (468)
T ss_pred CCeeEEeehhH----hH--hhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHH-hhCCCCCc
Confidence 34589999995 22 2335555554443210 01234599999999999999999954 322 225
Q ss_pred CCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHH-HhCCCcceeEeccCCcCccccHHHHHHHHhc
Q psy6266 74 REGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFL-NAGFTEAREYRYWNPEKRAVDFTGMYEDLVN 152 (218)
Q Consensus 74 ~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~-~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 152 (218)
++++| ++|.|+++++.+++.++ ++|||.|++++|+|+.|...+. ..|+ +++.+++..++.+.++++.+++.+.+
T Consensus 110 ~~~~I--iit~Ga~~al~~l~~~l--~~pGd~Vlv~~P~Y~~~~~~~~~~~g~-~~v~v~~~~~~~~~~~~~~le~~~~~ 184 (468)
T PLN02450 110 DPNKL--VLTAGATSANETLMFCL--AEPGDAFLLPTPYYPGFDRDLKWRTGV-EIVPIHCSSSNGFQITESALEEAYQQ 184 (468)
T ss_pred ChHHe--EEccChHHHHHHHHHHh--CCCCCEEEECCCCCCchHHHHhhcCCc-EEEEEecCCccCCcCCHHHHHHHHHH
Confidence 67776 59999999999998877 6899999999999999998888 4788 89999874345567788888887764
Q ss_pred C---CCCcEEEEcccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 153 A---PDNSVIILHACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 153 ~---~~~~~iil~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
. ..+..+++.++||||||. +|.++|++|+++||+| |+|.++.|++
T Consensus 185 ~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~D--E~Y~~~~f~~ 240 (468)
T PLN02450 185 AQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISD--EIYSGTVFDS 240 (468)
T ss_pred HHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEE--ccccccccCC
Confidence 2 223444555689999997 6889999999999999 9999988764
No 61
>PRK07777 aminotransferase; Validated
Probab=99.91 E-value=2.7e-23 Score=183.16 Aligned_cols=174 Identities=14% Similarity=0.095 Sum_probs=135.4
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCC-ceEEEEecc
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG-RAFGVQTLS 85 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~-~v~~~~t~G 85 (218)
..+|||++|.+ +. +.++.+.++..+.+.. ...+|.+..|.++||+++++++.. ..+....++ +| ++|.|
T Consensus 24 ~~~i~l~~g~p---~~--~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~-~~g~~~~~~~~i--~~t~G 93 (387)
T PRK07777 24 TGAVNLGQGFP---DE--DGPPEMLEAAQEAIAG--GVNQYPPGPGIPELRAAIAAQRRR-RYGLEYDPDTEV--LVTVG 93 (387)
T ss_pred CCeEEccCCCC---CC--CCCHHHHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHHHH-HhCCCCCCCCcE--EEeCC
Confidence 47899999973 32 3345567666665543 346799999999999999998754 333334444 55 58999
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCC-cCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP-EKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
+++|+.+++.++ +++||+|++++|+|+.|..+++..|+ +++.+++... ..+.+|++.+++.+.+ +..+++.++
T Consensus 94 ~~~al~~~~~~~--~~~gd~vli~~p~y~~~~~~~~~~g~-~~~~~~~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~~ 167 (387)
T PRK07777 94 ATEAIAAAVLGL--VEPGDEVLLIEPYYDSYAAVIAMAGA-HRVPVPLVPDGRGFALDLDALRAAVTP---RTRALIVNS 167 (387)
T ss_pred cHHHHHHHHHHh--cCCCCEEEEeCCCchhhHHHHHHCCC-EEEEeecCCccCCCcCCHHHHHHhcCc---ccEEEEEcC
Confidence 999999888766 67999999999999999999999999 8988888533 2356799999887743 344455568
Q ss_pred CCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 165 AHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 165 p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
||||||. +|.++|+++++++|+| ++|.++.++
T Consensus 168 p~NPtG~~~~~~~~~~l~~~~~~~~~~li~D--e~y~~~~~~ 207 (387)
T PRK07777 168 PHNPTGTVLTAAELAAIAELAVEHDLLVITD--EVYEHLVFD 207 (387)
T ss_pred CCCCCCccCCHHHHHHHHHHHHhcCcEEEEe--ccchhcccC
Confidence 9999997 6889999999999999 999988774
No 62
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.91 E-value=1.6e-23 Score=188.59 Aligned_cols=178 Identities=16% Similarity=0.129 Sum_probs=148.7
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhc-CCC-CccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEec
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAAD-DSL-NHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTL 84 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~-~~~-~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~ 84 (218)
..+|+++.|. ++.+..+....+++..++.+. ... ...|.+..|.++||+++++++.. ..+...++++| ++|.
T Consensus 89 ~~~i~f~~g~---p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~-~~g~~~~~~~I--iiT~ 162 (459)
T COG1167 89 PSVIDFAGGL---PDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLA-RRGISCEPEQI--VITS 162 (459)
T ss_pred CceecCCCCC---CCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHH-hcCCccCcCeE--EEeC
Confidence 6789999996 344445566777777766643 223 46899999999999999999984 44445677765 6999
Q ss_pred cChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 85 SGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 85 G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
|+++|+.++++++ ++|||.|++.+|+|+....+++..|+ +++.+|+. ..++|++.+++.+++. +...++++++
T Consensus 163 G~q~al~l~~~~l--~~pGd~v~vE~PtY~~~~~~~~~~g~-~~~~vp~d---~~G~~~e~le~~~~~~-~~k~~y~~P~ 235 (459)
T COG1167 163 GAQQALDLLLRLL--LDPGDTVLVEDPTYPGALQALEALGA-RVIPVPVD---EDGIDPEALEEALAQW-KPKAVYVTPT 235 (459)
T ss_pred CHHHHHHHHHHHh--CCCCCEEEEcCCCcHHHHHHHHHcCC-cEEecCCC---CCCCCHHHHHHHHhhc-CCcEEEECCC
Confidence 9999999999987 68999999999999999999999999 99999873 3589999999999764 3457788999
Q ss_pred CCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 165 AHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 165 p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
+|||||. +|.++|++|++|||+| ..|+.|.++.
T Consensus 236 ~qNPtG~tms~~rR~~Ll~lA~~~~~~IIED--D~y~el~~~~ 276 (459)
T COG1167 236 FQNPTGVTMSLERRKALLALAEKYDVLIIED--DYYGELRYDG 276 (459)
T ss_pred CCCCCCCccCHHHHHHHHHHHHHcCCeEEee--CcchhhhcCC
Confidence 9999997 7999999999999999 9999988873
No 63
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.91 E-value=4.1e-23 Score=182.60 Aligned_cols=176 Identities=17% Similarity=0.175 Sum_probs=142.2
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcC-CCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEec
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADD-SLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTL 84 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~ 84 (218)
++++|||+.|. + ++++++.++++..+..++. ....+|.+..|.++||+++++++.. .++..+++++| ++|.
T Consensus 32 ~~~~~~l~~g~---p--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~-~~~~~~~~~~i--~~t~ 103 (394)
T PRK06836 32 ADNVFDFSLGN---P--SVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNR-RFGTPLTADHI--VMTC 103 (394)
T ss_pred CCCeEEecCcC---C--CCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHH-HhCCCCCcCcE--EEeC
Confidence 35789999994 2 3456888999887766431 1246899999999999999999865 44444667776 5999
Q ss_pred cChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 85 SGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 85 G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
|+++++.++++++ +.+||+|++++|+|+.|..+++..|+ +++.++.. ++.+++|++.+++.+.. ++.+++.++
T Consensus 104 G~~~al~~~~~~l--~~~gd~Vli~~p~~~~~~~~~~~~g~-~v~~v~~~-~~~~~~d~~~l~~~~~~---~~~~v~~~~ 176 (394)
T PRK06836 104 GAAGALNVALKAI--LNPGDEVIVFAPYFVEYRFYVDNHGG-KLVVVPTD-TDTFQPDLDALEAAITP---KTKAVIINS 176 (394)
T ss_pred ChHHHHHHHHHHh--cCCCCEEEEcCCCCccHHHHHHHcCC-EEEEEecC-CccCcCCHHHHHhhcCc---CceEEEEeC
Confidence 9999999988877 67999999999999999999999999 99999884 44467899999888853 344455568
Q ss_pred CCCCcHH--------HHHHHhhc------CeEEEeeCCceeeccCCCC
Q psy6266 165 AHNPTAQ--------QVAHMVDK------HHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 165 p~NPTG~--------~l~~l~~~------~~i~ii~D~r~~y~~l~~~ 198 (218)
||||||. +|+++|++ |+++||.| ++|.++.++
T Consensus 177 p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~D--e~y~~~~~~ 222 (394)
T PRK06836 177 PNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISD--EPYREIVYD 222 (394)
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEe--ccccccccC
Confidence 9999998 68888988 89999999 999988775
No 64
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.90 E-value=1.1e-23 Score=191.26 Aligned_cols=147 Identities=13% Similarity=0.099 Sum_probs=120.9
Q ss_pred ccCcCCCCcHHHHHHHHHHhcCCCCC--CCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHH-
Q psy6266 45 HEYLPVLGLESFSSAATRMLLGGDAS--PPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFL- 121 (218)
Q Consensus 45 ~~Y~~~~G~~~lr~aia~~~~~~~~~--~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~- 121 (218)
..|.+..|.++||+++++++.. ..+ ..+++++| ++|.|+++|+.++++++ ++|||.|++++|+|+.|...++
T Consensus 88 ~~y~~~~G~~~LR~aiA~~l~~-~~g~~v~v~pe~I--vit~Ga~~al~~l~~~l--~~pGD~Vlv~~P~Y~~~~~~~~~ 162 (496)
T PLN02376 88 ANFQDYHGLKKFRQAIAHFMGK-ARGGKVTFDPERV--VMSGGATGANETIMFCL--ADPGDVFLIPSPYYAAFDRDLRW 162 (496)
T ss_pred hccCCCCCcHHHHHHHHHHHHH-HhCCCCcCChhhE--EEccchHHHHHHHHHHh--CCCCCEEEECCCCccchHHHHHh
Confidence 4699999999999999999964 433 33677876 59999999999999887 6899999999999999998887
Q ss_pred HhCCCcceeEeccCCcCccccHHHHHHHHhcC---CCCcEEEEcccCCCCcHH--------HHHHHhhcCeEEEeeCCce
Q psy6266 122 NAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA---PDNSVIILHACAHNPTAQ--------QVAHMVDKHHVYLLRSGRI 190 (218)
Q Consensus 122 ~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~---~~~~~iil~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~ 190 (218)
..|+ +++.+++...+.++++++.++++++++ ..+..+++.++||||||. +|+++|++|+++||+| |
T Consensus 163 ~~G~-~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~D--E 239 (496)
T PLN02376 163 RTGV-EIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVD--E 239 (496)
T ss_pred hCCC-EEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEE--c
Confidence 4798 899999854455788999987765431 234455555799999998 6889999999999999 9
Q ss_pred eeccCCCCC
Q psy6266 191 NMCGLTTQN 199 (218)
Q Consensus 191 ~y~~l~~~n 199 (218)
+|..+.|++
T Consensus 240 iY~~~~f~~ 248 (496)
T PLN02376 240 IYAATVFAG 248 (496)
T ss_pred CccccccCC
Confidence 999988764
No 65
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.90 E-value=6e-23 Score=181.00 Aligned_cols=175 Identities=14% Similarity=0.095 Sum_probs=141.3
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEecc
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLS 85 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G 85 (218)
|..+|||+.|. ++ +++++.++++..+.+.. ...+|.+..|.+.||+++++++.. .++..+.+++| ++|.|
T Consensus 30 ~~~~~~l~~~~---~~--~~~~~~~~~~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~~~~-~~~~~~~~~~i--~~~~g 99 (393)
T PRK05764 30 GRDVISLGAGE---PD--FDTPEHIKEAAIEALDD--GKTKYTPAAGIPELREAIAAKLKR-DNGLDYDPSQV--IVTTG 99 (393)
T ss_pred cCCEEEeCCCC---CC--CCCCHHHHHHHHHHHhc--CCCCcCCCCChHHHHHHHHHHHHH-HhCCCCCHHHE--EEeCC
Confidence 56789999995 23 45678899888776643 345699999999999999999854 43333566765 59999
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
+++|+.+++.++ +.+||.|++++|+|+.|..+++..|+ +++.++....+.+.+|++.+++.+.. +..+++.++|
T Consensus 100 ~~~a~~~~~~~~--~~~gd~vl~~~p~y~~~~~~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~v~~~~p 173 (393)
T PRK05764 100 AKQALYNAFMAL--LDPGDEVIIPAPYWVSYPEMVKLAGG-VPVFVPTGEENGFKLTVEQLEAAITP---KTKALILNSP 173 (393)
T ss_pred cHHHHHHHHHHh--cCCCCEEEecCCCCcchHHHHHHcCC-EEEEEecCcccCCcCCHHHHHHhhCc---cceEEEEECC
Confidence 999999988876 67999999999999999999999999 99999885334567789999887742 3444455789
Q ss_pred CCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 166 HNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 166 ~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
|||||. +|.++|++|+++++.| ++|..+.++
T Consensus 174 ~NPtG~~~~~~~~~~l~~~a~~~~~~ii~D--e~y~~~~~~ 212 (393)
T PRK05764 174 SNPTGAVYSPEELEAIADVAVEHDIWVLSD--EIYEKLVYD 212 (393)
T ss_pred CCCCCcccCHHHHHHHHHHHHHCCcEEEEe--ccccceeeC
Confidence 999997 6888999999999999 999988774
No 66
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.90 E-value=4.4e-24 Score=185.87 Aligned_cols=184 Identities=17% Similarity=0.079 Sum_probs=143.5
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHH-HhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCC-ceEEEEecc
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKE-LAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREG-RAFGVQTLS 85 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~-~v~~~~t~G 85 (218)
.+|||+.|.+....++ ++++.+.++..+ .... ...+.|.++.|.++||+++++++.+ ..+...+++ .| ++|.|
T Consensus 2 ~~I~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~Y~~~~g~~~lr~~ia~~~~~-~~~~~~~~~~~i--~~~~G 76 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQN-PPPPAAIKAAIRGAATS-SSFLGYPPPQGYPELREAIADFLGR-RYGVPVDPEANI--LVTSG 76 (363)
T ss_dssp TEEESSSSSTSSTTSS-HHHHHHHHHHHHHHHHH-TGCTSSTCTTHHHHHHHHHHHHHHH-HHTHHTTGGEGE--EEESH
T ss_pred CEEEEECCCCCCcccc-cchHHHHHHHHHHhhcc-cccccCCCchhhHHHHHHHHHHhhh-ccCcccccceEE--EEecc
Confidence 6899999987554444 345555555443 2222 3577899999999999999999974 344335555 54 58888
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCC---CcEEEEc
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPD---NSVIILH 162 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~---~~~iil~ 162 (218)
+++++.++..++. .++||.|++++|+|+.|...++..|+ +++.+++...+.+.+|++.+++.+++... +..+++.
T Consensus 77 ~~~~~~~~~~~~~-~~~~~~vlv~~P~y~~~~~~~~~~g~-~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~ 154 (363)
T PF00155_consen 77 AQAALFLLLRLLK-INPGDTVLVPDPCYPSYIEAARLLGA-EVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLI 154 (363)
T ss_dssp HHHHHHHHHHHHH-SSTTSEEEEEESSSTHHHHHHHHTTS-EEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEE
T ss_pred cccchhhhhhccc-ccccccceecCCccccccccccccCc-eeeeccccccccccccccccccccccccccccccceeee
Confidence 8888888776552 45899999999999999999999999 89999975456678899999999986421 2346666
Q ss_pred ccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCCH
Q psy6266 163 ACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQNL 200 (218)
Q Consensus 163 ~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ni 200 (218)
++||||||. +|+++|++++++||+| ++|..+.+++-
T Consensus 155 ~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~D--e~y~~~~~~~~ 198 (363)
T PF00155_consen 155 CNPNNPTGSVLSLEELRELAELAREYNIIIIVD--EAYSDLIFGDP 198 (363)
T ss_dssp ESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEE--ETTTTGBSSSS
T ss_pred cccccccccccccccccchhhhhcccccceeee--eceeccccCCC
Confidence 899999997 5777799999999999 99999999965
No 67
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=7.6e-23 Score=178.49 Aligned_cols=167 Identities=16% Similarity=0.113 Sum_probs=126.6
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
.+|..+|||++|. .++.+++.+.+++++... ...+|. ..|.++||+++++++ + +++++| ++|
T Consensus 27 ~~~~~~i~l~~~~-----~~~~~~~~~~~~~~~~~~---~~~~Y~-~~~~~~lr~~ia~~~-~------~~~~~I--~it 88 (357)
T PRK14809 27 LDPDDLVKLSSNE-----NPHGPSPAAVEAIREAAE---RVHSYP-KASHADLTAALADRW-D------VSPEQV--WLA 88 (357)
T ss_pred CCccceeEecCCC-----CCCCCCHHHHHHHHHHHh---hhhcCC-CCCHHHHHHHHHHHh-C------CCcceE--EEC
Confidence 3567899999995 234567788888776653 246785 479999999999987 3 456665 599
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcc
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~ 163 (218)
.|+++++.++++++ ++|||+|++++|+|+.|....+..|+ .++.+++...+.+.++.+.+.+... ..+.+++ +
T Consensus 89 ~G~~~al~~~~~~~--~~~gd~V~v~~P~y~~~~~~~~~~g~-~~~~~~l~~~~~~~~~~~~~~~~~~---~~k~i~l-~ 161 (357)
T PRK14809 89 NGGDGALDYLARAM--LDPGDTVLVPDPGFAYYGMSARYHHG-EVREYPVSKADDFEQTADTVLDAYD---GERIVYL-T 161 (357)
T ss_pred CCHHHHHHHHHHHh--cCCCCEEEEeCCChHHHHHHHHHcCC-eEEEEecccCcCCCcCHHHHHHhhc---CCcEEEE-e
Confidence 99999999998877 68999999999999999988898998 8988887433345566666655432 2234444 6
Q ss_pred cCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 164 CAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 164 ~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
+||||||. +++++++ ++++||+| ++|.++.++
T Consensus 162 ~p~NPTG~~~s~~~~~~l~~~~~-~~~~iI~D--e~y~~~~~~ 201 (357)
T PRK14809 162 SPHNPTGSEIPLDEVEALAERTD-EETLVVVD--EAYGEFAER 201 (357)
T ss_pred CCCCCCCcCCCHHHHHHHHHhCc-cCcEEEEe--chhhhccCC
Confidence 89999998 3444444 37899999 999998765
No 68
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=9e-23 Score=179.26 Aligned_cols=175 Identities=12% Similarity=0.104 Sum_probs=131.0
Q ss_pred eeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCC--CCCcCCCceEEEEeccC
Q psy6266 9 HCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDA--SPPLREGRAFGVQTLSG 86 (218)
Q Consensus 9 ~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~--~~~~~~~~v~~~~t~G~ 86 (218)
+++|+.|. ..+++++.+++++.+.+.......+| |..|.++||+++++++.. .. +..+++++| ++|.|+
T Consensus 30 ~~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~Y-~~~G~~~Lr~aia~~~~~-~~~~~~~v~~~~I--~it~Ga 100 (374)
T PRK02610 30 LDRLDTNE-----FPYDLPPDLKQKLAWLYQQGIESNRY-PDGGHEALKQAIAEYVNE-SAAGSSQITPANI--SVGNGS 100 (374)
T ss_pred eeEecCCC-----CCCCCCHHHHHHHHHHHhhcccccCC-CCCchHHHHHHHHHHhCc-cccccCCCCHHHE--EEcCCh
Confidence 78899995 24577889999887766431113568 457999999999999865 43 233667776 599999
Q ss_pred hhHHHHHHHHHHHhcCCC-eEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC-CCCcEEEEccc
Q psy6266 87 TGALRVGAEFLHRILNYT-TFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA-PDNSVIILHAC 164 (218)
Q Consensus 87 ~~al~~~~~~l~~l~~gd-~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~iil~~~ 164 (218)
++++..++.++ +.+|| .|++++|+|+.|...++..|+ +++.+++ ..+.+++|++.+++.+++. .++..+++.++
T Consensus 101 ~~al~~~~~~~--~~~g~~~Vlv~~P~y~~~~~~~~~~g~-~~~~~~~-~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~ 176 (374)
T PRK02610 101 DELIRSLLIAT--CLGGEGSILVAEPTFSMYGILAQTLGI-PVVRVGR-DPETFEIDLAAAQSAIEQTQNPPVRVVFVVH 176 (374)
T ss_pred HHHHHHHHHHH--cCCCCCeEEEcCCChHHHHHHHHHcCC-EEEEecC-CcccCCCCHHHHHHHHHhhcCCCceEEEEeC
Confidence 99998776655 45786 899999999999999999999 9999986 3445789999999888641 12344444457
Q ss_pred CCCCcHH-----HHHHHhh-cCeEEEeeCCceeeccCCCC
Q psy6266 165 AHNPTAQ-----QVAHMVD-KHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 165 p~NPTG~-----~l~~l~~-~~~i~ii~D~r~~y~~l~~~ 198 (218)
||||||. ++.++++ .++++||+| ++|.+|.+.
T Consensus 177 P~NPTG~~~s~~~l~~l~~~~~~~~iI~D--e~Y~~~~~~ 214 (374)
T PRK02610 177 PNSPTGNPLTAAELEWLRSLPEDILVVID--EAYFEFSQT 214 (374)
T ss_pred CCCCCCCCCCHHHHHHHHhccCCcEEEEe--ccccccCcc
Confidence 9999998 3333332 258999999 999998654
No 69
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.3e-22 Score=179.10 Aligned_cols=175 Identities=14% Similarity=0.042 Sum_probs=136.7
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEec
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTL 84 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~ 84 (218)
.|..+|+|+.|. +++++++.++++..+... ...+|.+..|.++||+++++++.. .+ ...++++| ++|.
T Consensus 28 ~~~~~i~l~~~~-----~~~~~~~~~~~a~~~~~~---~~~~Y~~~~g~~~lr~~ia~~~~~-~~-~~~~~~~i--~~t~ 95 (397)
T PRK07568 28 RGIKVYHLNIGQ-----PDIKTPEVFFEAIKNYDE---EVLAYSHSQGIPELREAFAKYYKK-WG-IDVEPDEI--LITN 95 (397)
T ss_pred hCCCEEEecCCC-----CCCCCCHHHHHHHHHHhc---CCcCcCCCCCCHHHHHHHHHHHHH-hC-CCCCcceE--EEcC
Confidence 356789999995 234557888888776542 356799999999999999998853 32 23566665 5999
Q ss_pred cChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccc-cHHHHHHHHhcCCCCcEEEEcc
Q psy6266 85 SGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAV-DFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 85 G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~-d~~~~~~~l~~~~~~~~iil~~ 163 (218)
|+++|+.+++.++ ++|||+|++++|+|++|..+++..|+ +++.++....+.+.. +++.+++.+. ++..+++.+
T Consensus 96 G~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~-~~~~v~~~~~~g~~~~~~~~l~~~~~---~~~~~v~i~ 169 (397)
T PRK07568 96 GGSEAILFAMMAI--CDPGDEILVPEPFYANYNGFATSAGV-KIVPVTTKIEEGFHLPSKEEIEKLIT---PKTKAILIS 169 (397)
T ss_pred ChHHHHHHHHHHh--cCCCCEEEEecCCCccHHHHHHHcCC-EEEEeecCcccCCCCCCHHHHHHhcC---ccceEEEEE
Confidence 9999999998876 67999999999999999999999998 888888742232332 5677877764 234455556
Q ss_pred cCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 164 CAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 164 ~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
+||||||. +|.++|++++++||.| ++|.++.+++
T Consensus 170 ~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~D--e~y~~~~~~~ 211 (397)
T PRK07568 170 NPGNPTGVVYTKEELEMLAEIAKKHDLFLISD--EVYREFVYDG 211 (397)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHCCcEEEEe--ccchhcccCC
Confidence 89999996 6888999999999999 9999987653
No 70
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.90 E-value=7.8e-23 Score=184.11 Aligned_cols=165 Identities=12% Similarity=0.015 Sum_probs=133.5
Q ss_pred CCCCceeeeeeeEEeCCCCCccCch---HHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLP---VVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFG 80 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~---~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~ 80 (218)
..|..+|+|++|. ++.++.++. ++.+|+.+++.. +.++|+++.|+++||+++++++.. + . +
T Consensus 33 ~~g~~~~~L~~g~---p~~D~~tds~t~a~~~a~~~a~~~--g~~~Y~~~~g~~~Lreaia~~~~~-~--------~--v 96 (460)
T PRK13238 33 EAGYNPFLLKSED---VFIDLLTDSGTGAMSDRQWAAMMR--GDEAYAGSRSYYRLEDAVKDIFGY-P--------Y--T 96 (460)
T ss_pred HcCCCEEeCCCCC---CCCCCCCCCCchhhhHHHHHHHHh--CCcccCCCCCHHHHHHHHHHHhCC-C--------c--E
Confidence 3588999999996 333455555 678777666643 467899999999999999998743 2 2 3
Q ss_pred EEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCC------cCcc--ccHHHHHHHHhc
Q psy6266 81 VQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP------EKRA--VDFTGMYEDLVN 152 (218)
Q Consensus 81 ~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~------~~~~--~d~~~~~~~l~~ 152 (218)
++|.|+++|+.++++++ ++||| |++++|.|++|...++.+|+ +++.+++... +.+. +|++.+++.+.+
T Consensus 97 v~t~ggt~A~~~~~~al--l~pGD-Vii~~p~~~~~~~~i~~~G~-~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~ 172 (460)
T PRK13238 97 IPTHQGRAAEQILFPVL--IKKGD-VVPSNYHFDTTRAHIELNGA-TAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEE 172 (460)
T ss_pred EECCCHHHHHHHHHHHh--CCCCC-EEccCCcccchHHHHHHcCC-EEEEEeccccccccccccccCCcCHHHHHHHHhh
Confidence 69999999999998877 78999 99999999999999999999 9999987321 2343 899999999875
Q ss_pred CC-CCcEEEEcccCCCCcH-H--------HHHHHhhcCeEEEeeCC
Q psy6266 153 AP-DNSVIILHACAHNPTA-Q--------QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 153 ~~-~~~~iil~~~p~NPTG-~--------~l~~l~~~~~i~ii~D~ 188 (218)
.. +++.+++.++|||||| . +|.++|++|++++|+|+
T Consensus 173 ~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Da 218 (460)
T PRK13238 173 VGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDA 218 (460)
T ss_pred cCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEC
Confidence 32 3566777789999998 2 79999999999999994
No 71
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.89 E-value=1.2e-22 Score=178.12 Aligned_cols=163 Identities=13% Similarity=0.110 Sum_probs=128.0
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEecc
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLS 85 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G 85 (218)
++.+|+|+.|. .++.+++.++++..+...+ ...| |..|.++||+++++++ + +++++| ++|.|
T Consensus 28 ~~~~i~l~~ne-----n~~~~~~~v~~a~~~~~~~---~~~Y-p~~g~~~Lr~aia~~~-~------~~~~~I--~vt~G 89 (366)
T PRK01533 28 DHSFVKLASNE-----NPFGCSPRVLDELQKSWLD---HALY-PDGGATTLRQTIANKL-H------VKMEQV--LCGSG 89 (366)
T ss_pred CCceEEeCCCC-----CCCCCCHHHHHHHHHHHHh---cCcC-CCCCHHHHHHHHHHHh-C------CCcceE--EECCC
Confidence 45789999995 3467788899887765532 2335 7789999999999987 4 456665 59999
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
+++++.++++++ ++|||+|++++|+|+.|...++..|+ +++.+++ . .+.+|++.+++.+.+ ++.+++.++|
T Consensus 90 s~e~i~~~~~~l--~~~gd~vlv~~P~y~~~~~~~~~~g~-~v~~v~~-~--~~~~d~~~l~~~~~~---~~~~v~i~~P 160 (366)
T PRK01533 90 LDEVIQIISRAV--LKAGDNIVTAGATFPQYRHHAIIEGC-EVKEVAL-N--NGVYDLDEISSVVDN---DTKIVWICNP 160 (366)
T ss_pred HHHHHHHHHHHh--cCCCCEEEEcCCcHHHHHHHHHHcCC-EEEEeec-C--CCCcCHHHHHHHhCc---CCcEEEEeCC
Confidence 999999999877 67999999999999999999999999 8999987 2 346899999887753 3344445689
Q ss_pred CCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 166 HNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 166 ~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
|||||. +++++|+++++ +|.| ++|.++.++
T Consensus 161 ~NPTG~~~~~~~l~~l~~~~~~~~~-~iiD--e~y~~~~~~ 198 (366)
T PRK01533 161 NNPTGTYVNDRKLTQFIEGISENTL-IVID--EAYYEYVTA 198 (366)
T ss_pred CCCCCCCcCHHHHHHHHHhCCCCCE-EEEE--ccHHHhhcc
Confidence 999998 56666666665 4558 899888764
No 72
>PLN02672 methionine S-methyltransferase
Probab=99.89 E-value=1.8e-22 Score=194.17 Aligned_cols=176 Identities=9% Similarity=-0.048 Sum_probs=139.7
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCC-CceEEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLRE-GRAFGV 81 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~-~~v~~~ 81 (218)
-+.|.++|+|++|. .++++|+.|++|+.+.... . .| ..|.+++|+++++++.. .++...++ ++| +
T Consensus 693 ~~~g~~vI~LsinE-----~d~ppPp~V~eAi~eal~~--~--~~--s~g~pdlr~aLa~~la~-~~Gv~~d~~e~I--I 758 (1082)
T PLN02672 693 GSQESSLIHMDVDE-----SFLPVPSAVKASIFESFVR--Q--NI--SESETDPRPSILQFIKS-NYGFPTDSCTEF--V 758 (1082)
T ss_pred ccCCCCEEEEeCCC-----CCCCCCHHHHHHHHHHHhh--c--CC--CCCChHHHHHHHHHHHH-HhCcCCCCCCEE--E
Confidence 34688999999994 3467899999998776532 1 12 56789999999999866 55554543 344 5
Q ss_pred EeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEE
Q psy6266 82 QTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIIL 161 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil 161 (218)
+|.|+++++.++++++ ++|||+|++++|+|+.|...++..|+ +++.+|+...+.+.+|++.+.+.+.+. ++..+++
T Consensus 759 vt~Gs~elL~lll~aL--l~pGD~VLVp~PtY~~Y~~~a~~~Ga-~vv~Vpl~~e~gf~lD~d~Le~al~~~-~~~~I~L 834 (1082)
T PLN02672 759 YGDTSLALFNKLVLCC--VQEGGTLCFPAGSNGTYVSAAKFLKA-NFRRIPTKSSDGFKLTAKTLASTLETV-KKPWVYI 834 (1082)
T ss_pred EeCCHHHHHHHHHHHH--cCCCCEEEEeCCChHHHHHHHHHcCC-EEEEEecccccCCCCCHHHHHHHhccC-CCCEEEE
Confidence 8999999999888877 68999999999999999999999999 999999853456778999998888532 2234444
Q ss_pred cccCC-CCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 162 HACAH-NPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 162 ~~~p~-NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
++|| ||||. +|.++|++|+++||+| ++|.++.|++
T Consensus 835 -~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsD--EaYsdL~Fd~ 878 (1082)
T PLN02672 835 -SGPTINPTGLLYSNSEIEEILSVCAKYGARVIID--TSFSGLEYDT 878 (1082)
T ss_pred -ECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEe--CCCCccccCC
Confidence 5675 99998 7889999999999999 9999988864
No 73
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.89 E-value=9.4e-23 Score=185.08 Aligned_cols=174 Identities=9% Similarity=-0.053 Sum_probs=123.6
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCC-CcCCCceEEEEeccC
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASP-PLREGRAFGVQTLSG 86 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~-~~~~~~v~~~~t~G~ 86 (218)
.+|+|++|. ++ +++++.+.++...++ . . .|.+..|.+++|+++++.+.....+. ...++...+++|.|+
T Consensus 95 ~~i~l~~g~---p~--~~~~~~~~~~~~~~~-~---~-~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Ga 164 (521)
T TIGR03801 95 DIISYVIDQ---LG--FDPDAFLYEMCDGII-G---D-NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGG 164 (521)
T ss_pred HHHhhcCCC---CC--CCCCHHHHHHHHHhh-c---C-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCH
Confidence 578999995 33 455666665555443 2 2 49888888888888886553302121 123331124699999
Q ss_pred hhHHHHHHHHHH---HhcCCCeEEecCCCchhHHHHHHHh--CCCcceeEeccCCcC-----ccccHHHHHHHHhcCCCC
Q psy6266 87 TGALRVGAEFLH---RILNYTTFYYSKPTWENHRLVFLNA--GFTEAREYRYWNPEK-----RAVDFTGMYEDLVNAPDN 156 (218)
Q Consensus 87 ~~al~~~~~~l~---~l~~gd~V~i~~P~y~~y~~~~~~~--g~~~~~~~~~~~~~~-----~~~d~~~~~~~l~~~~~~ 156 (218)
++|+..+++++. .++|||+|++++|+|++|..++++. |+ +++.++....+. +.+|++.+++.+. ++
T Consensus 165 t~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~-~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~---~~ 240 (521)
T TIGR03801 165 TAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDF-EVVRIKADEMTEDGTHTWQYPDKELEKLRD---PS 240 (521)
T ss_pred HHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCc-EEEEeecccccccccccCCCCHHHHHHhcC---CC
Confidence 999999887632 2689999999999999999998887 56 677776632222 5668888876543 44
Q ss_pred cEEEEcccCCCCcHH--------HHHHHhhcC--eEEEeeCCceeeccCCC
Q psy6266 157 SVIILHACAHNPTAQ--------QVAHMVDKH--HVYLLRSGRINMCGLTT 197 (218)
Q Consensus 157 ~~iil~~~p~NPTG~--------~l~~l~~~~--~i~ii~D~r~~y~~l~~ 197 (218)
+.+++.++||||||. +|+++|++| +++||+| ++|..|.+
T Consensus 241 ~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~D--EvY~~f~~ 289 (521)
T TIGR03801 241 IKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTD--DVYGTFVD 289 (521)
T ss_pred CcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEEC--CCchhhcc
Confidence 555555689999998 678889876 9999999 99998875
No 74
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.89 E-value=1.1e-22 Score=182.81 Aligned_cols=147 Identities=14% Similarity=0.092 Sum_probs=119.9
Q ss_pred ccCcCCCCcHHHHHHHHHHhcCCCCC--CCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHH-
Q psy6266 45 HEYLPVLGLESFSSAATRMLLGGDAS--PPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFL- 121 (218)
Q Consensus 45 ~~Y~~~~G~~~lr~aia~~~~~~~~~--~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~- 121 (218)
..|.+..|.++||+++|+++.. ..+ ..+++++| ++|.|+++|+.+++.++ ++|||.|++++|+|++|...+.
T Consensus 89 ~~y~~~~G~~~LR~aiA~~l~~-~~~~~~~v~p~~I--vit~G~t~al~~l~~~l--~~pGD~Vlv~~P~Y~~f~~~~~~ 163 (447)
T PLN02607 89 ALFQDYHGLKSFRQAMASFMEQ-IRGGKARFDPDRI--VLTAGATAANELLTFIL--ADPGDALLVPTPYYPGFDRDLRW 163 (447)
T ss_pred hccCCCcchHHHHHHHHHHHHH-hcCCCCCcCHHHe--EEcCChHHHHHHHHHHh--CCCCCEEEEcCCCCcchHHHHHh
Confidence 3588899999999999999964 433 23677776 59999999999988877 6899999999999999998887
Q ss_pred HhCCCcceeEeccCCcCccccHHHHHHHHhcC---CCCcEEEEcccCCCCcHH--------HHHHHhhcCeEEEeeCCce
Q psy6266 122 NAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA---PDNSVIILHACAHNPTAQ--------QVAHMVDKHHVYLLRSGRI 190 (218)
Q Consensus 122 ~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~---~~~~~iil~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~ 190 (218)
..|+ +++.+++...+.+.++++.++++++++ ..+.+++++++||||||. ++.++|++|++++|+| |
T Consensus 164 ~~g~-~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~D--E 240 (447)
T PLN02607 164 RTGV-KIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSD--E 240 (447)
T ss_pred cCCc-EEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEe--c
Confidence 4687 888888743445668999999888652 223455666899999997 7889999999999999 9
Q ss_pred eeccCCCCC
Q psy6266 191 NMCGLTTQN 199 (218)
Q Consensus 191 ~y~~l~~~n 199 (218)
+|..+.|++
T Consensus 241 iYa~~~f~~ 249 (447)
T PLN02607 241 IYSGSVFSA 249 (447)
T ss_pred cccccccCC
Confidence 999988764
No 75
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.89 E-value=2e-22 Score=176.32 Aligned_cols=165 Identities=12% Similarity=0.041 Sum_probs=126.9
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCC-cCCCceEEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPP-LREGRAFGVQ 82 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~-~~~~~v~~~~ 82 (218)
.+|..+|||++|. ++ ++.++.++++..++.. ..+|.+..|.++||+++++++.. ..+.. +++++| ++
T Consensus 24 ~~~~~~i~l~~~~---p~--~~~~~~~~~~~~~~~~----~~~Y~~~~G~~~lr~~ia~~l~~-~~~~~~~~~~~I--~i 91 (364)
T PRK07865 24 AHPDGIVDLSVGT---PV--DPVPPVIQEALAAAAD----APGYPTTAGTPELREAIVGWLAR-RRGVTGLDPAAV--LP 91 (364)
T ss_pred hcCCCEEEcCCCC---CC--CCCCHHHHHHHHHHHh----hCCCCCccCCHHHHHHHHHHHHH-HcCCCCCCcccE--EE
Confidence 3567899999995 33 3457788888766542 24799999999999999999965 54443 567765 59
Q ss_pred eccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEc
Q psy6266 83 TLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILH 162 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~ 162 (218)
|.|+++++.+++.++. +.+||+|++++|+|+.|...++..|+ +++.++. + +++.. .+..+++.
T Consensus 92 t~G~~~~i~~~~~~l~-~~~gd~Vl~~~p~y~~~~~~~~~~g~-~~~~~~~---------~----~~l~~--~~~~~v~~ 154 (364)
T PRK07865 92 VIGSKELVAWLPTLLG-LGPGDVVVIPELAYPTYEVGARLAGA-TVVRADS---------L----TELGP--QRPALIWL 154 (364)
T ss_pred ccChHHHHHHHHHHHc-CCCCCEEEECCCCcccHHHHHHhcCC-EEEecCC---------h----hhCCc--ccceEEEE
Confidence 9999999998776552 47999999999999999999999998 7777631 1 12222 23344444
Q ss_pred ccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 163 ACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 163 ~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
++||||||. +|.++|++++++||+| ++|.++.+++
T Consensus 155 ~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~D--e~y~~~~~~~ 197 (364)
T PRK07865 155 NSPSNPTGRVLGVDHLRKVVAWARERGAVVASD--ECYLELGWDA 197 (364)
T ss_pred cCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEe--cchhhhccCC
Confidence 689999995 7888999999999999 9999887753
No 76
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.89 E-value=3e-22 Score=177.53 Aligned_cols=170 Identities=11% Similarity=0.006 Sum_probs=125.5
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcC---CCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADD---SLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
|..+|+|+.|. +.+++++.+.++..+.+.+. ....+|.|..|.++||+++++++++ .. +++++| ++
T Consensus 32 ~~~~i~l~~~~-----~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~-~~---~~~d~I--~i 100 (402)
T TIGR03542 32 SADIIRLGIGD-----TTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYR-GR---IDPEEI--FI 100 (402)
T ss_pred CCCeEEcCCCC-----CCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHh-cC---CCHHHE--EE
Confidence 67899999994 33466888888877766431 1234699999999999999998754 33 566776 59
Q ss_pred eccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCC----------CcceeEeccCCcCccccHHHHHHHHhc
Q psy6266 83 TLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGF----------TEAREYRYWNPEKRAVDFTGMYEDLVN 152 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~----------~~~~~~~~~~~~~~~~d~~~~~~~l~~ 152 (218)
|.|+++++.++.. + +.+||+|++++|+|+.|..+++..|+ ++++.+++..++.+..++. +
T Consensus 101 t~Ga~~al~~l~~-l--~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-------~ 170 (402)
T TIGR03542 101 SDGAKCDVFRLQS-L--FGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLP-------E 170 (402)
T ss_pred CCCcHHHHHHHHH-h--cCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCcc-------c
Confidence 9999999998643 3 46899999999999999999999886 1355555422222222321 1
Q ss_pred CCCCcEEEEcccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 153 APDNSVIILHACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 153 ~~~~~~iil~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
. ++..+++.++||||||. +|.++|++|+++||+| ++|.++.++.
T Consensus 171 ~-~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~D--e~y~~~~~~~ 222 (402)
T TIGR03542 171 E-PKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFD--AAYSAFISDP 222 (402)
T ss_pred c-CCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEE--chhhhhccCC
Confidence 1 23344444689999997 7889999999999999 9999988764
No 77
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=2.7e-22 Score=174.41 Aligned_cols=161 Identities=11% Similarity=0.028 Sum_probs=126.5
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEec
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTL 84 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~ 84 (218)
.++.+|+|+.|. ..+++++.+++|..+...+ ...+|.+ .|.++||+++++++ + +++++| ++|.
T Consensus 22 ~~~~~i~l~~~~-----~~~~~~~~~~~a~~~~~~~--~~~~y~~-~~~~~lr~aia~~~-~------~~~~~I--~it~ 84 (353)
T PRK05387 22 KLAKLIKLNTNE-----NPYPPSPKVLEAIRAALGD--DLRLYPD-PNADALRQAIAAYY-G------LDPEQV--FVGN 84 (353)
T ss_pred cccceeeccCCC-----CCCCCCHHHHHHHHHHhhh--hhhcCCC-CcHHHHHHHHHHHh-C------CCHHHE--EEcC
Confidence 345789999995 2345678899988876643 3457854 47799999999987 3 455665 5999
Q ss_pred cChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 85 SGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 85 G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
|+++++.++++++ ++|||+|++++|+|+.|...++..|+ +++.+++. +.+.+|++.+++ .... ++.++
T Consensus 85 G~~~al~~~~~~l--~~~gd~vlv~~P~y~~~~~~~~~~g~-~~~~v~~~--~~~~~d~~~l~~------~~~~-v~~~~ 152 (353)
T PRK05387 85 GSDEVLAHAFLAF--FNHDRPLLFPDITYSFYPVYAGLYGI-PYEEIPLD--DDFSIDVEDYLR------PNGG-IIFPN 152 (353)
T ss_pred CHHHHHHHHHHHh--cCCCCEEEEeCCCHHHHHHHHHHcCC-EEEEeecC--CCCCCCHHHHHh------cCCE-EEEeC
Confidence 9999999999887 68999999999999999999999999 89999872 346788887752 2233 45578
Q ss_pred CCCCcHH-----HHHHHhhcC-eEEEeeCCceeeccCC
Q psy6266 165 AHNPTAQ-----QVAHMVDKH-HVYLLRSGRINMCGLT 196 (218)
Q Consensus 165 p~NPTG~-----~l~~l~~~~-~i~ii~D~r~~y~~l~ 196 (218)
||||||. ++.++++++ ++++|.| ++|..+.
T Consensus 153 P~NPtG~~~~~~~~~~l~~~~~~~~livD--e~y~~~~ 188 (353)
T PRK05387 153 PNAPTGIALPLAEIERILAANPDSVVVID--EAYVDFG 188 (353)
T ss_pred CCCCCCCCCCHHHHHHHHHhCCCcEEEEe--CcccccC
Confidence 9999998 677777654 9999999 9998764
No 78
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.88 E-value=6.6e-22 Score=169.06 Aligned_cols=175 Identities=13% Similarity=0.109 Sum_probs=146.8
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEecc
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLS 85 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G 85 (218)
++++|-|-+- |-+|+++|.|.+|+++.++. +..+|+ .+.++|-+++++|... +++-.+.++-| +.++|
T Consensus 24 ~~DvlPmWVA-----DMDf~~pp~i~~Al~~rvdh--GvfGY~--~~~~~~~~ai~~w~~~-r~~~~i~~e~i--~~~p~ 91 (388)
T COG1168 24 NEDVLPMWVA-----DMDFPTPPEIIEALRERVDH--GVFGYP--YGSDELYAAIAHWFKQ-RHQWEIKPEWI--VFVPG 91 (388)
T ss_pred CCCcceeeee-----cccCCCCHHHHHHHHHHHhc--CCCCCC--CCCHHHHHHHHHHHHH-hcCCCCCcceE--EEcCc
Confidence 3688888887 56789999999999888754 567887 7889999999999988 77766777754 58889
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCc-CccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPE-KRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~-~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
.--++.++.+++. .|||.|++..|.|++....++..|- +++..|+-.++ ...+|++.+++++.. ++..++++|+
T Consensus 92 VVpgi~~~I~~~T--~~gd~Vvi~tPvY~PF~~~i~~n~R-~~i~~pL~~~~~~y~iD~~~LE~~~~~--~~vkl~iLCn 166 (388)
T COG1168 92 VVPGISLAIRALT--KPGDGVVIQTPVYPPFYNAIKLNGR-KVIENPLVEDDGRYEIDFDALEKAFVD--ERVKLFILCN 166 (388)
T ss_pred chHhHHHHHHHhC--cCCCeeEecCCCchHHHHHHhhcCc-EEEeccccccCCcEEecHHHHHHHHhc--CCccEEEEeC
Confidence 9999999999884 5999999999999999999999997 89998885332 346699999999975 3345566689
Q ss_pred CCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 165 AHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 165 p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
||||||. +|.++|++|++.|||| |+-+.+++.+
T Consensus 167 PHNP~Grvwt~eeL~~i~elc~kh~v~VISD--EIHaDlv~~g 207 (388)
T COG1168 167 PHNPTGRVWTKEELRKIAELCLRHGVRVISD--EIHADLVLGG 207 (388)
T ss_pred CCCCCCccccHHHHHHHHHHHHHcCCEEEee--cccccccccC
Confidence 9999997 7999999999999999 8888887776
No 79
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=6.4e-22 Score=172.51 Aligned_cols=169 Identities=11% Similarity=0.030 Sum_probs=131.7
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEecc
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLS 85 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G 85 (218)
+..+|+|+.|. .++++++.++++..+.+.. ...+.|.+ .|.++||+++++++.- . ..++| ++|.|
T Consensus 25 ~~~~i~l~~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~Y~~-~~~~~lr~~ia~~~~~--~----~~~~I--~~t~G 89 (356)
T PRK04870 25 ATGMVKLDAME-----NPYRLPAELRAELGERLAE-VALNRYPD-PRAAALKAALRAAMGV--P----AGADV--LLGNG 89 (356)
T ss_pred CCCceeCcCCC-----CCCCCCHHHHHHHHHHhhc-cccccCCC-CCHHHHHHHHHHHhCc--C----CCCcE--EEcCC
Confidence 45899999994 2467899999998876643 23567877 6899999999998732 1 12344 69999
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
+++++.++++++ ++|||+|++++|+|+.|...++..|+ +++.+++. +.+++|++.+++.+.+. ++.+++.++|
T Consensus 90 ~~~~i~~~~~~~--~~~gd~vlv~~P~y~~~~~~~~~~g~-~~~~i~~~--~~~~~d~~~l~~~~~~~--~~~~v~l~~p 162 (356)
T PRK04870 90 SDELIQLLALAC--AKPGATVLAPEPGFVMYRMSAKLAGL-EFVGVPLT--ADFTLDLPAMLAAIAEH--RPALVFLAYP 162 (356)
T ss_pred HHHHHHHHHHHh--cCCCCEEEECCCCHHHHHHHHHHcCC-EEEEecCC--CCCCCCHHHHHHHhhcC--CCCEEEEcCC
Confidence 999999998876 68999999999999999999999999 99999873 34678999999888642 3333444689
Q ss_pred CCCcHH-----HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 166 HNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 166 ~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
|||||. ++.++++..++++|.| ++|..+.++
T Consensus 163 ~NPtG~~~~~~~~~~i~~~~~~~ii~D--e~y~~~~~~ 198 (356)
T PRK04870 163 NNPTGNLFDDADVERIIEAAPGLVVVD--EAYQPFAGD 198 (356)
T ss_pred CCCCCCCCCHHHHHHHHHHCCCEEEEE--CCchhhcCc
Confidence 999998 4555555447889999 999988764
No 80
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.88 E-value=3.3e-22 Score=174.65 Aligned_cols=165 Identities=15% Similarity=0.058 Sum_probs=127.7
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCC-cCCCceEEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPP-LREGRAFGVQ 82 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~-~~~~~v~~~~ 82 (218)
+++..+|||+.|. ++ +++++.++++.+++.. ..+|.+..|.++||+++++++.. ..+.. +.+++| ++
T Consensus 18 ~~~~~~i~l~~~~---p~--~~~~~~~~~~~~~~~~----~~~Y~~~~G~~~lr~~ia~~~~~-~~~~~~~~~~~I--~i 85 (357)
T TIGR03539 18 SHPDGIVDLSVGT---PV--DPVPPLIRAALAAAAD----APGYPQTWGTPELREAIVDWLER-RRGVPGLDPTAV--LP 85 (357)
T ss_pred hCCCCeEEccCCC---CC--CCCCHHHHHHHHHHHh----hCCCCcccCCHHHHHHHHHHHHH-hcCCCCCCcCeE--EE
Confidence 5688899999995 33 3557788888766542 45799999999999999999965 54443 667776 59
Q ss_pred eccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEc
Q psy6266 83 TLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILH 162 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~ 162 (218)
|.|+++++.+++.++. +.|||+|++++|+|+.|...++..|+ +++.++ +++ .+.. .++.+++.
T Consensus 86 t~G~~~~i~~~~~~l~-~~~gd~Vl~~~p~y~~~~~~~~~~g~-~~~~v~---------~~~----~l~~--~~~~~v~~ 148 (357)
T TIGR03539 86 VIGTKELVAWLPTLLG-LGPGDTVVIPELAYPTYEVGALLAGA-TPVAAD---------DPT----ELDP--VGPDLIWL 148 (357)
T ss_pred ccChHHHHHHHHHHHc-CCCCCEEEECCCCcHHHHHHHHhcCC-EEeccC---------Chh----hcCc--cCccEEEE
Confidence 9999999998877552 47999999999999999999999998 777662 111 2221 23444555
Q ss_pred ccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 163 ACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 163 ~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
++||||||. +|.++|++|+++||.| ++|.++.+++
T Consensus 149 ~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~D--e~y~~~~~~~ 191 (357)
T TIGR03539 149 NSPGNPTGRVLSVDELRAIVAWARERGAVVASD--ECYLELGWEG 191 (357)
T ss_pred eCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEe--cchhhhccCC
Confidence 689999997 6889999999999999 9999887653
No 81
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.88 E-value=1e-21 Score=171.47 Aligned_cols=166 Identities=13% Similarity=0.088 Sum_probs=127.4
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEec
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTL 84 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~ 84 (218)
.|.++|+|++|. ..+.+++.+.+|..+.... ..+|.+ .|.++||+++++++ + +++++| ++|.
T Consensus 18 ~~~~~i~l~~~~-----~~~~~p~~~~~a~~~~~~~---~~~y~~-~~~~~lr~~ia~~~-~------~~~~~i--~it~ 79 (356)
T PRK08056 18 SPDQLLDFSANI-----NPLGMPVSLKRAIIDNLDC---AERYPD-VEYRHLHQALARHH-Q------VPASWI--LAGN 79 (356)
T ss_pred ChhhEEEecccc-----CCCCCCHHHHHHHHHHHHh---cccCcC-ccHHHHHHHHHHHh-C------cChhhE--EECC
Confidence 367899999995 2256788899887766543 346865 57999999999986 4 455665 5999
Q ss_pred cChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 85 SGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 85 G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
|+++++.++++++ .+|+ +++++|+|+.|..+++..|+ +++.+|+..++.+.+| ..+.+.+. +++.+++.++
T Consensus 80 Ga~~~l~~~~~~l---~~g~-viv~~P~y~~~~~~~~~~g~-~~~~v~~~~~~~~~~~-~~~~~~~~---~~~k~v~l~~ 150 (356)
T PRK08056 80 GETESIFAVVSGL---KPRR-AMIVTPGFAEYRRALQQVGC-EIRRYSLREADGWQLT-DAILEALT---PDLDCLFLCT 150 (356)
T ss_pred CHHHHHHHHHHHh---CCCC-EEEeCCCcHHHHHHHHHcCC-eEEEEecccccCCCcc-HHHHHhcc---CCCCEEEEeC
Confidence 9999999888764 5775 78889999999999999999 9999988533334445 23444443 3344555689
Q ss_pred CCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 165 AHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 165 p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
||||||. +|+++|++++++||+| ++|.++.+++
T Consensus 151 p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~D--e~y~~~~~~~ 191 (356)
T PRK08056 151 PNNPTGLLPERQLLQAIAERCKSLNIALILD--EAFIDFIPDE 191 (356)
T ss_pred CcCCCCCCCCHHHHHHHHHHHHhcCCEEEEe--cchhccCCcc
Confidence 9999997 6788899999999999 9999998765
No 82
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=1.3e-21 Score=169.77 Aligned_cols=163 Identities=10% Similarity=0.026 Sum_probs=124.2
Q ss_pred CCCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 2 YMSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 2 ~~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
|...|.++|+|++|+ .++++++.++++..+.+.. +..+.|.+ .|.++||+++++++.. .+ +++++| +
T Consensus 14 ~~~~~~~~i~l~~~~-----~~~~~p~~~~~~~~~~~~~-~~~~~Y~~-~~~~~Lr~aia~~~~~-~~---~~~~~i--~ 80 (335)
T PRK14808 14 YETEKRDRTYLALNE-----NPFPFPEDLVDEVFRRLNS-DTLRIYYD-SPDEELIEKILSYLDT-DF---LSKNNV--S 80 (335)
T ss_pred CCCCCCceeEecCCC-----CCCCCCHHHHHHHHHHhhh-hhhhcCCC-CChHHHHHHHHHHhCC-CC---CCcceE--E
Confidence 456778999999994 3467788899887765533 22344755 4999999999999965 43 556765 5
Q ss_pred EeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEE
Q psy6266 82 QTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIIL 161 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil 161 (218)
+|.|+++++.++++++ |+|++++|+|+.|..+++..|+ +++.+|+. . .+.++.. .+. + +.+++
T Consensus 81 it~Ga~~~i~~~~~~~------d~v~v~~P~y~~~~~~~~~~g~-~~~~v~~~-~-~~~~~~~----~~~---~-~~~i~ 143 (335)
T PRK14808 81 VGNGADEIIYVMMLMF------DRSVFFPPTYSCYRIFAKAVGA-KFLEVPLT-K-DLRIPEV----NVG---E-GDVVF 143 (335)
T ss_pred EcCCHHHHHHHHHHHh------CcEEECCCCHHHHHHHHHHcCC-eEEEecCC-C-cCCCChh----Hcc---C-CCEEE
Confidence 9999999999988754 7899999999999999999999 99999873 2 2333322 121 2 34555
Q ss_pred cccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccCCC
Q psy6266 162 HACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGLTT 197 (218)
Q Consensus 162 ~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l~~ 197 (218)
+++||||||. ++.+++ +++++||+| |+|.+|..
T Consensus 144 i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~D--E~Y~~f~~ 181 (335)
T PRK14808 144 IPNPNNPTGHVFEREEIERIL-KTGAFVALD--EAYYEFHG 181 (335)
T ss_pred EeCCCCCCCCCcCHHHHHHHH-hcCCEEEEE--CchhhhcC
Confidence 6899999998 677777 589999999 99999853
No 83
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.87 E-value=7.5e-22 Score=175.50 Aligned_cols=173 Identities=13% Similarity=0.048 Sum_probs=123.7
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcC---CCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADD---SLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..+|||+.|. ++..+.+.+.++++.++++.+. ....+|.+..|.++||+++++++.. ..+..+++++| ++|
T Consensus 30 ~~~i~l~~g~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~-~~g~~v~~~~I--~it 103 (416)
T PRK09440 30 PGAIMLGGGN---PAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNE-RYGWNISPQNI--ALT 103 (416)
T ss_pred CCceeccCCC---CCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHH-HhCCCCChhhE--EEc
Confidence 4579999996 3322233456777777665431 1235799999999999999999965 44444777876 599
Q ss_pred ccChhHHHHHHHHHHHhc-----CCCeEEe-cCCCchhHHHHHHHhCCC---cceeEeccCCc--CccccHHHHHHHHhc
Q psy6266 84 LSGTGALRVGAEFLHRIL-----NYTTFYY-SKPTWENHRLVFLNAGFT---EAREYRYWNPE--KRAVDFTGMYEDLVN 152 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~-----~gd~V~i-~~P~y~~y~~~~~~~g~~---~~~~~~~~~~~--~~~~d~~~~~~~l~~ 152 (218)
.|+++|+.++++++ ++ +||+|++ ++|+|+.|.......+.. .+..++. ..+ .+++|++.++ +
T Consensus 104 ~Ga~~al~~~~~~l--~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~--~-- 176 (416)
T PRK09440 104 NGSQSAFFYLFNLF--AGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELL-PEGQFKYHVDFEHLH--I-- 176 (416)
T ss_pred cChHHHHHHHHHHH--hccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccc-cccccccCCCHHHcc--c--
Confidence 99999999999877 43 5899999 699999998755433310 2222333 122 2457777775 2
Q ss_pred CCCCcEEEEcccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 153 APDNSVIILHACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 153 ~~~~~~iil~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
.++..+++.++||||||. +|+++|++++++||+| ++|..+
T Consensus 177 -~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~D--e~Y~~~ 224 (416)
T PRK09440 177 -DEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLID--NAYGPP 224 (416)
T ss_pred -CCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEe--CCcccc
Confidence 234456666899999998 7889999999999999 999754
No 84
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.87 E-value=2.4e-21 Score=169.32 Aligned_cols=163 Identities=11% Similarity=0.061 Sum_probs=124.7
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccCh
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGT 87 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~ 87 (218)
.+|||+.|. ++ +.+++.++++..+... ...+|.+. |.++||+++++++ + +++++| ++|.|++
T Consensus 23 ~~i~l~~~~----n~-~~~~~~~~~a~~~~~~---~~~~Y~~~-~~~~Lr~aia~~~-~------v~~~~I--~it~G~~ 84 (360)
T PRK07392 23 AILDFSASI----NP-LGPPESVIAAIQSALS---ALRHYPDP-DYRELRLALAQHH-Q------LPPEWI--LPGNGAA 84 (360)
T ss_pred cEEEeCCcC----CC-CCCCHHHHHHHHHHHH---HhhcCCCc-CHHHHHHHHHHHh-C------cChhhE--EECCCHH
Confidence 679999995 33 5678888888776653 24679775 5689999999988 4 456665 5999999
Q ss_pred hHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCc---cccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 88 GALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKR---AVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 88 ~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~---~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
+++.++++++ .+||+|++++|+|+.|...++..|+ +++.+++...... ..+++.+.+.. +++.++++++
T Consensus 85 ~~i~~~~~~l---~~g~~vlv~~P~y~~~~~~~~~~g~-~~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~n 156 (360)
T PRK07392 85 ELLTWAGREL---AQLRAVYLITPAFGDYRRALRAFGA-TVKELPLPLDQPSPGLTLRLQTLPPQL----TPNDGLLLNN 156 (360)
T ss_pred HHHHHHHHHh---CCCCeEEEECCCcHHHHHHHHHcCC-eEEEEecccccCCcccccCHHHHHHhc----cCCCEEEEeC
Confidence 9999988765 3789999999999999999999999 9999987432221 13455544322 2345566679
Q ss_pred CCCCcHH-----HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 165 AHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 165 p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
||||||. +|.+++++++++|+ | |+|.++.++.
T Consensus 157 P~NPTG~~~~~~~l~~l~~~~~~~Ii-D--E~y~~~~~~~ 193 (360)
T PRK07392 157 PHNPTGKLWSREAILPLLEQFALVVV-D--EAFMDFLPPD 193 (360)
T ss_pred CCCCCCCCcCHHHHHHHHHHCCEEEE-E--CchhhhccCc
Confidence 9999998 79999999987555 9 9999998753
No 85
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=2.1e-21 Score=169.30 Aligned_cols=163 Identities=16% Similarity=0.143 Sum_probs=129.5
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccCh
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGT 87 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~ 87 (218)
.+|+|+.|.+ .+.+++.+++|..+..+. ..|.|..|.++||+++++++ + +++++| ++|.|++
T Consensus 30 ~~i~l~~n~~-----~~~~~~~v~~a~~~~~~~----~~~~p~~g~~~lr~~ia~~~-~------~~~~~i--~~t~G~~ 91 (359)
T PRK03158 30 KIVKLASNEN-----PYGPSPKVKEAIAAHLDE----LALYPDGYAPELRTKVAKHL-G------VDEEQL--LFGAGLD 91 (359)
T ss_pred ceEEecCCCC-----CCCCCHHHHHHHHHHHHH----hhcCCCCcHHHHHHHHHHHh-C------CCHHHE--EECCCHH
Confidence 6899999963 234577899888776632 45778899999999999987 3 344665 5999999
Q ss_pred hHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCC
Q psy6266 88 GALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHN 167 (218)
Q Consensus 88 ~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~N 167 (218)
+++.++++++ +++||+|++++|+|+.|...+...|+ +++.+|+. .+++|++.+++.+.. +..+++.++|||
T Consensus 92 ~~l~~~~~~~--~~~gd~v~~~~p~y~~~~~~~~~~g~-~~~~~~~~---~~~~d~~~l~~~~~~---~~~~v~i~~p~N 162 (359)
T PRK03158 92 EVIQMISRAL--LNPGTNTVMAEPTFSQYRHNAIIEGA-EVREVPLK---DGGHDLEAMLKAIDE---QTKIVWICNPNN 162 (359)
T ss_pred HHHHHHHHHH--hCCCCEEEEcCCCHHHHHHHHHHcCC-eEEEEecC---CCCcCHHHHHHhcCC---CCCEEEEeCCCC
Confidence 9999988876 67999999999999999999999999 89999874 356899998877742 333444478999
Q ss_pred CcHH-----HHHHHhhc--CeEEEeeCCceeeccCCCCC
Q psy6266 168 PTAQ-----QVAHMVDK--HHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 168 PTG~-----~l~~l~~~--~~i~ii~D~r~~y~~l~~~n 199 (218)
|||. ++.++++. ++++||.| ++|.++.+++
T Consensus 163 PtG~~~~~~~l~~~~~~~~~~~~ii~D--e~y~~~~~~~ 199 (359)
T PRK03158 163 PTGTYVNHEELLSFLESVPSHVLVVLD--EAYYEYVTAE 199 (359)
T ss_pred CCCCCCCHHHHHHHHHhCCCCcEEEEE--CchHhhcCCc
Confidence 9998 56666654 69999999 9999988753
No 86
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.87 E-value=3e-21 Score=169.70 Aligned_cols=171 Identities=15% Similarity=0.110 Sum_probs=135.5
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEec
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTL 84 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~ 84 (218)
.+..+|+|+.|. ..+++++.+.+|+.+...+ .....|.+..|.++||+++++++ + .++++| ++|.
T Consensus 26 ~~~~~i~l~~~~-----~~~~~~~~~~~a~~~~~~~-~~~~~y~~~~g~~~lr~~ia~~l-~------~~~~~v--~~~~ 90 (380)
T PRK06225 26 KDKEMIWMGQNT-----NHLGPHEEVREAMIRCIEE-GEYCKYPPPEGFPELRELILKDL-G------LDDDEA--LITA 90 (380)
T ss_pred hcCCeEEccCCC-----CCCCCCHHHHHHHHHHHhc-CCCCCCCCCcchHHHHHHHHHhc-C------CCCCcE--EEeC
Confidence 456789999984 3456788899988877754 33467999999999999999986 3 334554 5999
Q ss_pred cChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCC-cCccccHHHHHHHHhcCCCCcEEEEcc
Q psy6266 85 SGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP-EKRAVDFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 85 G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~~~~~l~~~~~~~~iil~~ 163 (218)
|+++++.++++++ +.+||+|++++|+|..|...++..|+ +++.+++... +.+.+|++.+++.+.. ++.+++.+
T Consensus 91 g~t~al~~~~~~~--~~~gd~vl~~~p~y~~~~~~~~~~g~-~~~~v~~~~~~~~~~~d~~~l~~~~~~---~~~~v~l~ 164 (380)
T PRK06225 91 GATESLYLVMRAF--LSPGDNAVTPDPGYLIIDNFASRFGA-EVIEVPIYSEECNYKLTPELVKENMDE---NTRLIYLI 164 (380)
T ss_pred CHHHHHHHHHHHh--cCCCCEEEEcCCCCcchHHHHHHhCc-eEEeeccccccCCccCCHHHHHhhcCC---CceEEEEe
Confidence 9999999999876 67899999999999999988999999 8988886422 2356899998887753 34444445
Q ss_pred cCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 164 CAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 164 ~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
+||||||. +|.++|+++++++|.| ++|.++..+
T Consensus 165 ~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~D--e~y~~~~~~ 205 (380)
T PRK06225 165 DPLNPLGSSYTEEEIKEFAEIARDNDAFLLHD--CTYRDFARE 205 (380)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEe--hhHHHHhcc
Confidence 89999997 6888899999999999 998766443
No 87
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.87 E-value=3e-21 Score=168.53 Aligned_cols=163 Identities=13% Similarity=0.058 Sum_probs=125.6
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccCh
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGT 87 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~ 87 (218)
+++||+.|.. + ..+++.+++++.+... ...+|.+ .|.++||+++++++ + +++++| ++|.|++
T Consensus 20 ~~~~l~~~~~--~---~~~p~~~~~a~~~~~~---~~~~Y~~-~~~~~lr~~ia~~~-~------~~~~~i--~it~Ga~ 81 (354)
T PRK06358 20 MILDFSANIN--P---LGVPESLKQAITENLD---KLVEYPD-PDYLELRKRIASFE-Q------LDLENV--ILGNGAT 81 (354)
T ss_pred ceEEecCCCC--C---CCCCHHHHHHHHHHHH---hhhcCCC-ccHHHHHHHHHHHh-C------CChhhE--EECCCHH
Confidence 4799999952 2 2347888888777653 2456854 57999999999987 4 456776 5999999
Q ss_pred hHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCC
Q psy6266 88 GALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHN 167 (218)
Q Consensus 88 ~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~N 167 (218)
+++.++++++ . +++|++++|+|+.|...++..|+ +++.+++..++.+.+| +.+++.+.. +..+++.++|||
T Consensus 82 ~~l~~~~~~~---~-~~~v~i~~P~y~~~~~~~~~~g~-~~~~~~~~~~~~~~~d-~~~~~~~~~---~~~~v~~~~P~N 152 (354)
T PRK06358 82 ELIFNIVKVT---K-PKKVLILAPTFAEYERALKAFDA-EIEYAELTEETNFAAN-EIVLEEIKE---EIDLVFLCNPNN 152 (354)
T ss_pred HHHHHHHHHh---C-CCcEEEecCChHHHHHHHHHcCC-eeEEEeCccccCCCcc-HHHHHhhcc---CCCEEEEeCCCC
Confidence 9999988764 3 47899999999999999999999 8999987433345677 555555532 334444468999
Q ss_pred CcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 168 PTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 168 PTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
|||. +|.++|++++++||+| ++|.++.+++
T Consensus 153 PtG~~~~~~~~~~l~~~a~~~~~~ii~D--e~Y~~~~~~~ 190 (354)
T PRK06358 153 PTGQLISKEEMKKILDKCEKRNIYLIID--EAFMDFLEEN 190 (354)
T ss_pred CCCCccCHHHHHHHHHHHHhcCCEEEEe--CcccccCCCc
Confidence 9997 6888899999999999 9999998874
No 88
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=5.4e-21 Score=168.48 Aligned_cols=165 Identities=12% Similarity=0.046 Sum_probs=128.3
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEec
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTL 84 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~ 84 (218)
+|+.+|+|+.|. ..+.+++.++++..... ..+.|. ..|.++||+++++++ + +++++| ++|.
T Consensus 50 ~~~~~i~l~~n~-----~p~~~~~~v~~a~~~~~----~~~~Yp-~~~~~~lr~~ia~~~-~------~~~~~I--~~t~ 110 (380)
T PLN03026 50 KPEDIVKLDANE-----NPYGPPPEVLEALGNMK----FPYVYP-DPESRRLRAALAEDS-G------LESENI--LVGC 110 (380)
T ss_pred CccceEEccCCC-----CCCCCCHHHHHHHHhhH----hhccCC-CCCHHHHHHHHHHHh-C------cChhhE--EEcC
Confidence 367899999995 22456677888765421 234574 468999999999986 3 445665 5899
Q ss_pred cChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 85 SGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 85 G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
|+++++.+++.++ ++|||+|++++|+|+.|...++..|+ +++.++.. +.+.+|++.+++.+.. +++.+++.++
T Consensus 111 Ga~~~i~~~~~~~--~~~gd~Vlv~~P~y~~y~~~~~~~g~-~~~~v~~~--~~~~~d~~~l~~~~~~--~~~~~v~l~~ 183 (380)
T PLN03026 111 GADELIDLLMRCV--LDPGDKIIDCPPTFGMYVFDAAVNGA-EVIKVPRT--PDFSLDVPRIVEAVET--HKPKLLFLTS 183 (380)
T ss_pred CHHHHHHHHHHHh--cCCCCEEEEcCCChHHHHHHHHHcCC-EEEEeecC--CCCCcCHHHHHHHHhc--cCCcEEEEeC
Confidence 9999999998876 67999999999999999999999999 89898872 3467899999888742 2334444468
Q ss_pred CCCCcHH-----HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 165 AHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 165 p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
||||||. ++.++++.. +++|.| ++|.+|.+.
T Consensus 184 P~NPTG~~~~~~~l~~l~~~~-~~vi~D--eaY~~~~~~ 219 (380)
T PLN03026 184 PNNPDGSIISDDDLLKILELP-ILVVLD--EAYIEFSTQ 219 (380)
T ss_pred CCCCCCCCCCHHHHHHHHhcC-CEEEEE--CcchhhcCC
Confidence 9999998 677887654 999999 999998765
No 89
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=9.6e-21 Score=164.28 Aligned_cols=163 Identities=10% Similarity=0.074 Sum_probs=125.3
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEecc
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLS 85 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G 85 (218)
|..+|+|+.|.. .+++++.+.++..+...+ ....+|. ..|.++||+++++++ + +++++| ++|.|
T Consensus 17 ~~~~i~l~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~Y~-~~g~~~lr~~ia~~~-~------~~~~~I--~~t~G 80 (337)
T PRK03967 17 GNYRIWLDKNEN-----PFDLPEELKEEIFEELKR-VPFNRYP-HITSDPLREAIAEFY-G------LDAENI--AVGNG 80 (337)
T ss_pred CCceEEecCCCC-----CCCCCHHHHHHHHHHhhc-CccccCC-CCCHHHHHHHHHHHh-C------cCcceE--EEcCC
Confidence 346799999952 245677888887766533 2356785 579999999999987 3 455665 59999
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
+++++.+++.++ +||+|++++|+|+.|..+++..|+ +++.+++. +.+++|++.+++.+. +..+++.++|
T Consensus 81 ~~~~l~~~~~~~----~gd~V~v~~P~y~~~~~~~~~~g~-~~~~v~~~--~~~~~d~~~l~~~~~----~~~~v~~~~P 149 (337)
T PRK03967 81 SDELISYLVKLF----EGKHIVITPPTFGMYSFYAKLNGI-PVIDVPLK--EDFTIDGERIAEKAK----NASAVFICSP 149 (337)
T ss_pred HHHHHHHHHHHh----CCCeEEEeCCChHHHHHHHHHcCC-eEEEeecC--CCCCcCHHHHHHhcc----CCCEEEEeCC
Confidence 999998776543 799999999999999999999999 89999873 236788888876542 2234445799
Q ss_pred CCCcHH-----HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 166 HNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 166 ~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
|||||. ++.+++ ++++++|+| ++|.++...
T Consensus 150 ~NPtG~~~~~~~l~~i~-~~~~~ii~D--e~y~~~~~~ 184 (337)
T PRK03967 150 NNPTGNLQPEEEILKVL-ETGKPVVLD--EAYAEFSGK 184 (337)
T ss_pred CCCCCCCCCHHHHHHHH-hcCCEEEEE--Cchhhhccc
Confidence 999997 677777 479999999 999988644
No 90
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=6.8e-21 Score=167.12 Aligned_cols=165 Identities=14% Similarity=0.073 Sum_probs=126.9
Q ss_pred CCCce-eeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 5 SGEIH-CCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 5 ~~~~~-i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
.|..+ |+|++|. ..+.+++.+.+|..+... ...+|.+. +.++||+++++++ + +++++| ++|
T Consensus 29 ~g~~~~~~l~~~~-----~~~~~~~~~~~a~~~~~~---~~~~Y~~~-~~~~Lr~~ia~~~-~------~~~~~I--~it 90 (369)
T PRK08153 29 RGRPFRARIGANE-----SGFGPSPSVIAAMREAAA---EIWKYGDP-ENHDLRHALAAHH-G------VAPENI--MVG 90 (369)
T ss_pred cCCcceeEecCCC-----CCCCCCHHHHHHHHHHHH---HhhcCCCC-ccHHHHHHHHHHh-C------CCHHHE--EEc
Confidence 45544 6999995 235778889988776553 23568876 5899999999987 3 455665 599
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcc
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~ 163 (218)
.|+++++.++++++ ++|||.|++++|+|+.|...++..|+ +++.+|+. . ...|++.+.+.+.. .+..+++.+
T Consensus 91 ~G~~~~l~~~~~~~--~~~gd~vlv~~p~y~~~~~~~~~~g~-~~~~vp~~-~--~~~~~~~l~~~~~~--~~~~~i~l~ 162 (369)
T PRK08153 91 EGIDGLLGLIVRLY--VEPGDPVVTSLGAYPTFNYHVAGFGG-RLVTVPYR-D--DREDLDALLDAARR--ENAPLVYLA 162 (369)
T ss_pred CCHHHHHHHHHHHh--cCCCCEEEECCCcchHHHHHHHHcCC-eEEEeeCC-C--CCCCHHHHHHHhcc--cCCcEEEEe
Confidence 99999999998876 67999999999999999999999999 89999872 2 25788888776643 233344447
Q ss_pred cCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 164 CAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 164 ~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
+||||||. ++.+.++ ++++||.| |+|..+.++
T Consensus 163 ~P~NPtG~~~~~~~l~~l~~~~~-~~~~lI~D--E~y~~~~~~ 202 (369)
T PRK08153 163 NPDNPMGSWHPAADIVAFIEALP-ETTLLVLD--EAYCETAPA 202 (369)
T ss_pred CCCCCCCCCCCHHHHHHHHHhCC-CCcEEEEe--CchhhhcCc
Confidence 89999997 4455544 48999999 999998765
No 91
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=5.4e-21 Score=167.75 Aligned_cols=164 Identities=12% Similarity=0.074 Sum_probs=128.7
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEecc
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLS 85 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G 85 (218)
++.+|||+.|.. + ..+++.+++++.+... ...+|.+..| .+||+++++++ + .++++| ++|.|
T Consensus 35 ~~~~i~l~~~~~--~---~~~~~~~~~al~~~~~---~~~~Y~~~~g-~~lr~~ia~~~-~------~~~~~i--~~t~G 96 (371)
T PRK05166 35 VPRIAKLGSNEN--P---LGPSPAVRRAFADIAE---LLRLYPDPQG-RALREAIAART-G------VPADRI--ILGNG 96 (371)
T ss_pred CcceEEcCCCCC--C---CCCCHHHHHHHHHHHH---HhhcCCCCcH-HHHHHHHHHHh-C------cCHHHE--EEcCC
Confidence 568899999962 1 3457788888776543 2457999999 49999999876 3 345665 59999
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
+++++.++++++ +++||+|++++|+|+.|...++..|+ +++.+++. +.+++|++.+++.+.. ++.+++.++|
T Consensus 97 ~~~~l~~~~~~~--~~~gd~vli~~P~y~~~~~~~~~~g~-~~~~v~~~--~~~~~~~~~l~~~~~~---~~~~v~l~~p 168 (371)
T PRK05166 97 SEDLIAVICRAV--LRPGDRVVTLYPSFPLHEDYPTMMGA-RVERVTVT--PDLGFDLDALCAAVAR---APRMLMFSNP 168 (371)
T ss_pred HHHHHHHHHHHh--cCCCCEEEEcCCChHHHHHHHHHcCC-eEEEeecC--CCCCCCHHHHHHhhhc---CCCEEEEeCC
Confidence 999999988876 67999999999999999999999999 89998873 2367899999888753 2334445899
Q ss_pred CCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 166 HNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 166 ~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
|||||. +|+++++ ++++||.| ++|..+.++
T Consensus 169 ~NPtG~~~~~~~~~~l~~~~~-~~~~ii~D--e~y~~~~~~ 206 (371)
T PRK05166 169 SNPVGSWLTADQLARVLDATP-PETLIVVD--EAYAEYAAG 206 (371)
T ss_pred CCCCCCCCCHHHHHHHHHhCC-CCcEEEEE--CcHHHhcCC
Confidence 999997 3444443 47899999 999998865
No 92
>PRK09105 putative aminotransferase; Provisional
Probab=99.86 E-value=6.8e-21 Score=167.31 Aligned_cols=162 Identities=16% Similarity=0.099 Sum_probs=125.1
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccC
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSG 86 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~ 86 (218)
.++|+|+.|. ..+++++.+.+|+.+...+ ...|.+. +.++||+++++++ + +++++| ++|.|+
T Consensus 43 ~~~i~l~~~~-----~~~~~~~~~~~a~~~~~~~---~~~Y~~~-~~~~Lr~aia~~~-~------v~~e~I--~it~Gs 104 (370)
T PRK09105 43 EGAVFLNANE-----CPLGPSPAARDAAARSAAL---SGRYDLE-LEDDLRTLFAAQE-G------LPADHV--MAYAGS 104 (370)
T ss_pred CCcEEecCCC-----CCCCCCHHHHHHHHHHHHH---hcCCCCc-hHHHHHHHHHHHh-C------cChhhE--EEcCCh
Confidence 3578999995 2356788888887766533 2358765 4999999999875 3 456776 599999
Q ss_pred hhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCC
Q psy6266 87 TGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAH 166 (218)
Q Consensus 87 ~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~ 166 (218)
++++.++++++ +++||+|++++|+|+.|...++..|+ +++.+++. . .+.+|++.+.+.. +++.+++.++||
T Consensus 105 ~~ai~~~~~~l--~~~gd~Vli~~P~y~~~~~~~~~~g~-~~~~v~~~-~-~~~~d~~~l~~~~----~~~~~v~l~nP~ 175 (370)
T PRK09105 105 SEPLNYAVLAF--TSPTAGLVTADPTYEAGWRAADAQGA-PVAKVPLR-A-DGAHDVKAMLAAD----PNAGLIYICNPN 175 (370)
T ss_pred HHHHHHHHHHH--cCCCCEEEEeCCChHHHHHHHHHcCC-eEEEecCC-C-CCCCCHHHHHhcC----CCCCEEEEeCCC
Confidence 99999999877 67999999999999999999999999 89999873 2 4567888886542 234455557899
Q ss_pred CCcHH-----HHHHHhh--cCeEEEeeCCceeeccCCC
Q psy6266 167 NPTAQ-----QVAHMVD--KHHVYLLRSGRINMCGLTT 197 (218)
Q Consensus 167 NPTG~-----~l~~l~~--~~~i~ii~D~r~~y~~l~~ 197 (218)
||||. ++.++++ ++++++|.| ++|..+..
T Consensus 176 NPTG~~~~~~~l~~l~~~~~~~~~lIvD--EaY~~f~~ 211 (370)
T PRK09105 176 NPTGTVTPRADIEWLLANKPAGSVLLVD--EAYIHFSD 211 (370)
T ss_pred CCCCcCcCHHHHHHHHHhCCCCcEEEEE--CchHHhcc
Confidence 99998 4555443 358999999 99987754
No 93
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=1.4e-20 Score=164.09 Aligned_cols=164 Identities=11% Similarity=0.053 Sum_probs=129.3
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccCh
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGT 87 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~ 87 (218)
..++|+.|. .++++|+.+.+|..+.... ....+|.+. +.++||+++++++ + +++++| ++|.|++
T Consensus 23 ~~~~l~~~~-----~~~~~p~~~~~a~~~~~~~-~~~~~y~~~-~~~~lr~~ia~~~-~------~~~~~i--~it~G~~ 86 (351)
T PRK14807 23 YKYKMDANE-----TPFELPEEVIKNIQEIVKS-SQVNIYPDP-TAEKLREELARYC-S------VVPTNI--FVGNGSD 86 (351)
T ss_pred ceeEccCCC-----CCCCCCHHHHHHHHHHhhc-CcccCCCCc-cHHHHHHHHHHHh-C------CCcccE--EEecCHH
Confidence 457888884 3467788999987776643 245678754 5799999999986 3 445665 5999999
Q ss_pred hHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCC
Q psy6266 88 GALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHN 167 (218)
Q Consensus 88 ~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~N 167 (218)
+++.+++.++ ++|||+|++++|+|+.|...++..|+ +++.++.. +.+++|++.+.+.+... ++.+++.++|||
T Consensus 87 ~~l~~~~~~l--~~~gd~Vlv~~p~y~~~~~~~~~~g~-~~~~v~~~--~~~~~d~~~l~~~~~~~--~~k~v~l~~p~N 159 (351)
T PRK14807 87 EIIHLIMLAF--INKGDVVIYPHPSFAMYSVYSKIAGA-VEIPVKLK--EDYTYDVGSFIKVIEKY--QPKLVFLCNPNN 159 (351)
T ss_pred HHHHHHHHHh--cCCCCEEEEeCCChHHHHHHHHHcCC-eEEEeecC--CCCCCCHHHHHHHhhcc--CCCEEEEeCCCC
Confidence 9999998877 68999999999999999999999999 89888773 34678999998888632 333444468999
Q ss_pred CcHH-----HHHHHhhcCeEEEeeCCceeeccCC
Q psy6266 168 PTAQ-----QVAHMVDKHHVYLLRSGRINMCGLT 196 (218)
Q Consensus 168 PTG~-----~l~~l~~~~~i~ii~D~r~~y~~l~ 196 (218)
|||. ++.+++++++.++|.| ++|.++.
T Consensus 160 PtG~~~~~~~l~~l~~~~~~~~ivD--e~y~~~~ 191 (351)
T PRK14807 160 PTGSVIEREDIIKIIEKSRGIVVVD--EAYFEFY 191 (351)
T ss_pred CCCCCCCHHHHHHHHHhCCCEEEEe--Ccchhhc
Confidence 9997 7888888878888899 9998874
No 94
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.84 E-value=3.3e-20 Score=160.88 Aligned_cols=165 Identities=10% Similarity=0.074 Sum_probs=128.7
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEecc
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLS 85 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G 85 (218)
+..+|||++|.+ +.++++.+.+|+.+... ..++|.+..| ++||+++++++. .++++| +.|.|
T Consensus 18 ~~~~i~l~~~~~-----~~~~~~~~~~a~~~~~~---~~~~y~~~~~-~~lr~~ia~~~~-------~~~~~i--~~~~G 79 (346)
T TIGR01141 18 GKEVIKLNSNEN-----PFGPPPKAKEALRAEAD---KLHRYPDPDP-AELKQALADYYG-------VDPEQI--LLGNG 79 (346)
T ss_pred CCceEEccCCCC-----CCCCCHHHHHHHHHhHH---HhhcCCCCCH-HHHHHHHHHHhC-------cChHHE--EEcCC
Confidence 457999999963 35667888888777653 2467887776 999999998873 334555 48999
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
+++++..++.++ +++||+|++++|+|+.|..+++..|+ +++.+++. . .+.+|++.+++.+. +++.+++.++|
T Consensus 80 ~~~~l~~~~~~l--~~~gd~v~~~~p~y~~~~~~~~~~g~-~~~~~~~~-~-~~~~d~~~l~~~~~---~~~~~v~l~~p 151 (346)
T TIGR01141 80 SDEIIELLIRAF--LEPGDAVLVPPPTYSMYEISAKIHGA-EVVKVPLD-E-DGQLDLEDILVAID---DKPKLVFLCSP 151 (346)
T ss_pred HHHHHHHHHHHh--cCCCCEEEEcCCCHHHHHHHHHHcCC-eEEEeccC-C-CCCCCHHHHHHhcC---CCCCEEEEeCC
Confidence 999998888776 57999999999999999989999999 89998874 3 35679999988653 34444555689
Q ss_pred CCCcHH-----HHHHHhhcC--eEEEeeCCceeeccCCCC
Q psy6266 166 HNPTAQ-----QVAHMVDKH--HVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 166 ~NPTG~-----~l~~l~~~~--~i~ii~D~r~~y~~l~~~ 198 (218)
|||||. ++.++++.+ ++++|.| ++|..+.+.
T Consensus 152 ~NptG~~~~~~~~~~l~~~~~~~~~ii~D--~~y~~~~~~ 189 (346)
T TIGR01141 152 NNPTGNLLSRSDIEAVLERTPEDALVVVD--EAYGEFSGE 189 (346)
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCcEEEEE--CchhhhcCC
Confidence 999997 566666655 9999999 999987664
No 95
>PRK03321 putative aminotransferase; Provisional
Probab=99.84 E-value=4.3e-20 Score=160.67 Aligned_cols=164 Identities=16% Similarity=0.149 Sum_probs=128.5
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccCh
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGT 87 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~ 87 (218)
.+|+|+.|. +.+.+++.+++|+.+.... ...| |..|.++||+++++++. .++++| ++|.|++
T Consensus 23 ~~i~l~~~~-----~~~~~~~~~~~a~~~~~~~---~~~y-~~~g~~~lr~~ia~~~~-------~~~~~I--~~~~G~~ 84 (352)
T PRK03321 23 GAIKLSSNE-----TPFGPLPSVRAAIARAAAG---VNRY-PDMGAVELRAALAEHLG-------VPPEHV--AVGCGSV 84 (352)
T ss_pred cceeccCCC-----CCCCCCHHHHHHHHHHHHh---cCcC-CCCcHHHHHHHHHHHhC-------cCHHHE--EECCCHH
Confidence 578999995 2344677899988776642 3457 56899999999999872 345565 4899999
Q ss_pred hHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCC
Q psy6266 88 GALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHN 167 (218)
Q Consensus 88 ~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~N 167 (218)
+++.+++.++ +.|||+|+++.|+|+.|...++..|+ +++.+++. + ..++|++.+++.+.. +.+.+++ ++|||
T Consensus 85 ~~l~~~~~~~--~~~gd~Vli~~p~y~~~~~~~~~~g~-~~~~v~~~-~-~~~~~~~~l~~~~~~--~~~~v~l-~~p~N 156 (352)
T PRK03321 85 ALCQQLVQAT--AGPGDEVIFAWRSFEAYPILVQVAGA-TPVQVPLT-P-DHTHDLDAMAAAITD--RTRLIFV-CNPNN 156 (352)
T ss_pred HHHHHHHHHh--cCCCCEEEeCCCCHHHHHHHHHHcCC-EEEEccCC-C-CCCCCHHHHHHhhcc--CCCEEEE-eCCCC
Confidence 9999888766 67999999999999999999999999 89998873 2 357899999887753 2234444 58999
Q ss_pred CcHH-----HHHHHhhc--CeEEEeeCCceeeccCCCCC
Q psy6266 168 PTAQ-----QVAHMVDK--HHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 168 PTG~-----~l~~l~~~--~~i~ii~D~r~~y~~l~~~n 199 (218)
|||. ++.+++++ ++++||.| ++|.++.++.
T Consensus 157 PtG~~~~~~~l~~l~~~~~~~~~ii~D--e~y~~~~~~~ 193 (352)
T PRK03321 157 PTGTVVTPAELARFLDAVPADVLVVLD--EAYVEYVRDD 193 (352)
T ss_pred CcCCCcCHHHHHHHHHhCCCCeEEEEe--chHHHhccCc
Confidence 9997 67777765 69999999 9999988764
No 96
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.84 E-value=8.7e-20 Score=159.08 Aligned_cols=164 Identities=11% Similarity=0.081 Sum_probs=127.7
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE-ec
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ-TL 84 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~-t~ 84 (218)
++.+|||++|. ..+.+++.+++++.+.... .+.|.+..+ ++||+++++++ + .+++++ ++ |.
T Consensus 33 ~~~~i~l~~~~-----~~~~~~~~~~~~~~~~~~~---~~~y~~~~~-~~lr~~ia~~~-~------~~~~~i--~~~~~ 94 (361)
T PRK00950 33 PESIIKLGSNE-----NPLGPSPKAVEAIEKELSK---IHRYPEPDA-PELREALSKYT-G------VPVENI--IVGGD 94 (361)
T ss_pred ccceEEccCCC-----CCCCCCHHHHHHHHHHHHh---hcCCCCCCH-HHHHHHHHHHh-C------CCHHHE--EEeCC
Confidence 44789999995 2244677788877665532 456876655 99999999986 3 345565 36 78
Q ss_pred cChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 85 SGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 85 G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
|+++++.++++++ +.|||+|++++|+|+.|...++..|+ +++.++. .+.+.+|++.+++.+.. ++.+++.++
T Consensus 95 Ga~~~i~~~~~~~--~~~gd~vlv~~p~y~~~~~~~~~~g~-~~~~~~~--~~~~~~~~~~l~~~~~~---~~~~v~~~~ 166 (361)
T PRK00950 95 GMDEVIDTLMRTF--IDPGDEVIIPTPTFSYYEISAKAHGA-KPVYAKR--EEDFSLDVDSVLNAITE---KTKVIFLCT 166 (361)
T ss_pred CHHHHHHHHHHHh--cCCCCEEEEcCCChHHHHHHHHHcCC-EEEEeec--CCCCCcCHHHHHHHhcc---CCCEEEEeC
Confidence 8999998888766 57999999999999999999999999 8888874 33457899999887742 333444468
Q ss_pred CCCCcHH-----HHHHHhhcCeEEEeeCCceeeccCCC
Q psy6266 165 AHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGLTT 197 (218)
Q Consensus 165 p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l~~ 197 (218)
||||||. ++.++++++++++|.| ++|.++..
T Consensus 167 p~nptG~~~~~~~l~~l~~~~~~~li~D--e~y~~~~~ 202 (361)
T PRK00950 167 PNNPTGNLIPEEDIRKILESTDALVFVD--EAYVEFAE 202 (361)
T ss_pred CCCCCCCCcCHHHHHHHHHHCCcEEEEE--CchhhhCc
Confidence 9999998 7899999999999999 99988763
No 97
>PRK08354 putative aminotransferase; Provisional
Probab=99.82 E-value=1.2e-19 Score=155.68 Aligned_cols=151 Identities=13% Similarity=0.047 Sum_probs=115.2
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccC
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSG 86 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~ 86 (218)
+.+|+|+.|. ++ .+|+.+++|+.++.. ..++|.. ...||+++++++. ++| ++|.|+
T Consensus 8 ~~~i~l~~~~----np--~~p~~~~~a~~~~~~---~~~~yp~---~~~l~~~ia~~~~----------~~I--~vt~G~ 63 (311)
T PRK08354 8 EGLIDFSASV----NP--YPPEWLDEMFERAKE---ISGRYTY---YEWLEEEFSKLFG----------EPI--VITAGI 63 (311)
T ss_pred cceeEecCCC----CC--CCCHHHHHHHHHHHH---HhhcCCC---hHHHHHHHHHHHC----------CCE--EECCCH
Confidence 3689999995 32 235788888776653 2446754 4679999998762 134 599999
Q ss_pred hhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCC
Q psy6266 87 TGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAH 166 (218)
Q Consensus 87 ~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~ 166 (218)
++++.+++.++ .+||+|++++|+|+.|..+++..|+ +++.+ .+|++.+++.+. +... ++.++||
T Consensus 64 ~~al~~~~~~~---~~gd~vlv~~P~y~~~~~~~~~~g~-~~~~~--------~~d~~~l~~~~~---~~~~-vi~~~P~ 127 (311)
T PRK08354 64 TEALYLIGILA---LRDRKVIIPRHTYGEYERVARFFAA-RIIKG--------PNDPEKLEELVE---RNSV-VFFCNPN 127 (311)
T ss_pred HHHHHHHHHhh---CCCCeEEEeCCCcHHHHHHHHHcCC-EEeec--------CCCHHHHHHhhc---CCCE-EEEecCC
Confidence 99999877543 4899999999999999999999998 77654 246777776664 2234 4447899
Q ss_pred CCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 167 NPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 167 NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
||||. +|.++|+++++++|+| ++|.++.+++
T Consensus 128 NPTG~~~~~~~l~~l~~~a~~~~~~li~D--e~y~~f~~~~ 166 (311)
T PRK08354 128 NPDGKFYNFKELKPLLDAVEDRNALLILD--EAFIDFVKKP 166 (311)
T ss_pred CCCCCccCHHHHHHHHHHhhhcCcEEEEe--Ccchhccccc
Confidence 99997 6788889999999999 9999998763
No 98
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.82 E-value=2e-19 Score=157.22 Aligned_cols=166 Identities=14% Similarity=0.107 Sum_probs=127.9
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEec
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTL 84 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~ 84 (218)
.|..+|||+.|.. + ..+++.++++..+.... ..+|.+..| ++||+++++++ + .++++| ++|.
T Consensus 30 ~~~~~i~l~~~~~--~---~~~~~~~~~a~~~~~~~---~~~y~~~~~-~~lr~~ia~~~-~------~~~~~i--~~t~ 91 (367)
T PRK02731 30 GIADIIKLASNEN--P---LGPSPKAIEAIRAAADE---LHRYPDGSG-FELKAALAEKF-G------VDPERI--ILGN 91 (367)
T ss_pred CCCceEEecCCCC--C---CCCCHHHHHHHHHHHHh---hcCCCCCcH-HHHHHHHHHHh-C------cCHHHE--EEcC
Confidence 3567899999952 1 23467788887776632 456876654 79999999986 3 344565 5999
Q ss_pred cChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 85 SGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 85 G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
|+++++.++++++ +++||+|++++|+|+.|...++..|+ +++.++. +.+++|++.+++.+.. ++.+++.++
T Consensus 92 G~~~~l~~~~~~l--~~~gd~vl~~~p~y~~~~~~~~~~g~-~~~~~~~---~~~~~~~~~l~~~~~~---~~~~v~l~~ 162 (367)
T PRK02731 92 GSDEILELLARAY--LGPGDEVIYSEHGFAVYPIAAQAVGA-KPVEVPA---KDYGHDLDAMLAAVTP---RTRLVFIAN 162 (367)
T ss_pred CHHHHHHHHHHHh--cCCCCEEEEecCCHHHHHHHHHHcCC-eEEEecc---cCCCCCHHHHHHHhCC---CCcEEEEeC
Confidence 9999999888876 67899999999999999988899999 8888876 2467899999888852 334444579
Q ss_pred CCCCcHH-----HHHHHhhc--CeEEEeeCCceeeccCCCCC
Q psy6266 165 AHNPTAQ-----QVAHMVDK--HHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 165 p~NPTG~-----~l~~l~~~--~~i~ii~D~r~~y~~l~~~n 199 (218)
||||||. ++.++++. +++++|.| ++|..+.++.
T Consensus 163 p~nptG~~~~~~~l~~l~~~~~~~~~li~D--e~y~~~~~~~ 202 (367)
T PRK02731 163 PNNPTGTYLPAEEVERFLAGVPPDVLVVLD--EAYAEYVRRK 202 (367)
T ss_pred CCCCCCcCCCHHHHHHHHHhCCCCcEEEEE--CcHHHhccCc
Confidence 9999998 56666654 48999999 9999887653
No 99
>PRK07908 hypothetical protein; Provisional
Probab=99.81 E-value=4.2e-19 Score=154.47 Aligned_cols=158 Identities=13% Similarity=0.048 Sum_probs=122.3
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEecc
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLS 85 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G 85 (218)
+..+|||++|. ..+.+++.+++++.+...+ ...|.+..|.++||+++++++ + +++++| ++|.|
T Consensus 21 ~~~~~~l~~~~-----~~~~~~~~~~~~~~~~~~~---~~~Y~~~~g~~~lr~aia~~~-~------~~~~~I--~it~G 83 (349)
T PRK07908 21 GPGLLDFAVNV-----RHDTPPEWLRERLAARLGD---LAAYPSTEDERRARAAVAARH-G------RTPDEV--LLLAG 83 (349)
T ss_pred CCCeEEecCCC-----CCCCCCHHHHHHHHHHhhH---hhcCCCccchHHHHHHHHHHh-C------cChhhE--EECCC
Confidence 56899999995 2356788899988876643 457999999999999999986 3 456666 59999
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
+++++.++++ + .| +.++++.|+|+.|...++..|+ +++.+++. . .+.+|++.+ . ++..+++.++|
T Consensus 84 a~~al~~~~~-l---~~-~~viv~~P~y~~~~~~~~~~G~-~i~~v~~~-~-~~~~d~~~l----~---~~~~~i~l~np 148 (349)
T PRK07908 84 AAEGFALLAR-L---RP-RRAAVVHPSFTEPEAALRAAGI-PVHRVVLD-P-PFRLDPAAV----P---DDADLVVIGNP 148 (349)
T ss_pred HHHHHHHHHh-c---CC-CeEEEeCCCChHHHHHHHHcCC-EEEeeccC-c-ccCcChhHh----c---cCCCEEEEcCC
Confidence 9999998876 3 46 5677899999999999999999 99999873 2 256677633 2 23335555899
Q ss_pred CCCcHH-----HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 166 HNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 166 ~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
|||||. +|.+++++ +.++|.| ++|..+..+
T Consensus 149 ~NPTG~~~~~~~l~~l~~~-~~~iIvD--e~y~~~~~~ 183 (349)
T PRK07908 149 TNPTSVLHPAEQLLALRRP-GRILVVD--EAFADAVPG 183 (349)
T ss_pred CCCCCCCcCHHHHHHHHhc-CCEEEEE--CcchhhccC
Confidence 999997 78888865 6778889 999887544
No 100
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.80 E-value=7.5e-19 Score=156.84 Aligned_cols=164 Identities=12% Similarity=0.030 Sum_probs=125.4
Q ss_pred CCCceeeeeeeEEeCCCCCccCc---hHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVL---PVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~---~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
.|..+|+|..|.. --++.++ ..+.++..+++.. +...|+++.|+++||+++++++.. +. ++
T Consensus 9 ~g~n~~~l~~~~v---~iDlltds~t~ams~~~~~a~~~--gd~~Y~~~~g~~~Leeaia~~~g~---------~~--vv 72 (431)
T cd00617 9 AGYNVFLLRSEDV---YIDLLTDSGTGAMSDYQWAAMML--GDEAYAGSKSFYDLEDAVQDLFGF---------KH--II 72 (431)
T ss_pred cCCCEEeCCCCCc---CCCCCCCCCcHHHHHHHHHHHHh--CCCccCCCCCHHHHHHHHHHHHCC---------Ce--EE
Confidence 5778889988852 2234444 3555544444433 345699999999999999998743 22 46
Q ss_pred EeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCc--------CccccHHHHHHHHhcC
Q psy6266 82 QTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPE--------KRAVDFTGMYEDLVNA 153 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~--------~~~~d~~~~~~~l~~~ 153 (218)
.|.||++|+.++++++ ++|||+| +++|+|+.|...+...|+ +++.++..... .+.+|++.+++.+.+.
T Consensus 73 ~t~~Gt~Al~la~~al--~~pGD~V-~~~~~f~~~~~~i~~~Ga-~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~ 148 (431)
T cd00617 73 PTHQGRGAENILFSIL--LKPGRTV-PSNMHFDTTRGHIEANGA-VPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEV 148 (431)
T ss_pred EcCCHHHHHHHHHHHh--CCCCCEE-ccCCcccchHHHHHhCCC-EeEEEecccccccccccCCCCCcCHHHHHHHhCcc
Confidence 9999999999999887 7899988 799999999999999999 99999884221 1348999999999753
Q ss_pred -CCCcEEEEcccCCCCc-HH--------HHHHHhhcCeEEEeeCC
Q psy6266 154 -PDNSVIILHACAHNPT-AQ--------QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 154 -~~~~~iil~~~p~NPT-G~--------~l~~l~~~~~i~ii~D~ 188 (218)
.++..+++.++||||| |. +|.++|++|+|+||+|+
T Consensus 149 ~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~Da 193 (431)
T cd00617 149 GAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDA 193 (431)
T ss_pred cCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEc
Confidence 2234556667999999 54 67899999999999995
No 101
>KOG0258|consensus
Probab=99.80 E-value=1.7e-18 Score=148.20 Aligned_cols=180 Identities=12% Similarity=0.088 Sum_probs=139.9
Q ss_pred chHHHHHHHHHhhc-CCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCe
Q psy6266 27 LPVVRQAEKELAAD-DSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTT 105 (218)
Q Consensus 27 ~~~v~~a~~~~~~~-~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~ 105 (218)
.+.+++|. +++++ .+..-.|+.++|++-.|+.+|++..+ +++...+++.| ..|.|++.|+..++.++.. .+.+-
T Consensus 89 ~Dai~RA~-~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~r-RDG~p~~p~dI--~LT~GAS~ai~~il~l~~~-~~~~G 163 (475)
T KOG0258|consen 89 TDAIKRAK-RILNDCGGSLGAYSDSQGVPGVRKHVAEFIER-RDGIPADPEDI--FLTTGASPAIRSILSLLIA-GKKTG 163 (475)
T ss_pred HHHHHHHH-HHHHhcCCcccccccccCChhHHHHHHHHHHh-ccCCCCCHHHe--eecCCCcHHHHHHHHHHhc-CCCCc
Confidence 44555554 44444 33455799999999999999999988 88766677876 5999999999999887743 57899
Q ss_pred EEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCC--CcEEEEcccCCCCcHH--------HHHH
Q psy6266 106 FYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPD--NSVIILHACAHNPTAQ--------QVAH 175 (218)
Q Consensus 106 V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~--~~~iil~~~p~NPTG~--------~l~~ 175 (218)
|++|-|.||-|.+.+...|+ ..+.|-+.+++.|.+|++.+++.+.++.+ +..++++.+|.||||. +|..
T Consensus 164 vliPiPQYPLYsAti~l~~~-~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~ 242 (475)
T KOG0258|consen 164 VLIPIPQYPLYSATISLLGG-TQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIIC 242 (475)
T ss_pred eEeecCCCchhHHHHHHhCC-cccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHH
Confidence 99999999999999999999 77777776667789999999988876521 1233333469999998 6889
Q ss_pred HhhcCeEEEeeCCceeeccCCCCCHHHHHHHHHHHHHcCC
Q psy6266 176 MVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDAVTSIP 215 (218)
Q Consensus 176 l~~~~~i~ii~D~r~~y~~l~~~ni~~~~~a~~~~~~~~~ 215 (218)
+|.+++++++.| |+|.+-.|.+-- ==+++++++.+.+
T Consensus 243 fa~~~~l~llaD--EVYQ~Nvy~~~s-kFhSfKKvl~emg 279 (475)
T KOG0258|consen 243 FAAEEGLVLLAD--EVYQDNVYTTGS-KFHSFKKVLHEMG 279 (475)
T ss_pred HHHHcCeEEech--HHHHhhccCCCc-chHhHHHHHHHhc
Confidence 999999999999 999987666422 2256666665443
No 102
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.79 E-value=1.7e-18 Score=151.17 Aligned_cols=162 Identities=10% Similarity=0.056 Sum_probs=129.3
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccCh
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGT 87 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~ 87 (218)
.+++|+... ++ +.+++.++++.++.++ ..++|... ...+||+++++++.. .++++| +++.|++
T Consensus 23 ~~i~LssNe----nP-~gp~~~~~~~~~~~~~---~~~rYPd~-~~~~l~~a~a~~~~~------~~~~~V--~~gnGsd 85 (356)
T COG0079 23 GIIKLSSNE----NP-YGPPPKVIEAIRAALD---KLNRYPDP-DYRELRAALAEYYGV------VDPENV--LVGNGSD 85 (356)
T ss_pred cceeecCCC----CC-CCCCHHHHHHHHHHHH---hhccCCCC-cHHHHHHHHHHHhCC------CCcceE--EEcCChH
Confidence 478888884 33 4456888887777663 36778766 889999999998753 445655 5899999
Q ss_pred hHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCC
Q psy6266 88 GALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHN 167 (218)
Q Consensus 88 ~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~N 167 (218)
+.+.++.+++ +.|||+|+++.|+|+.|...++..|+ +++.+++. + +.+|++.+.+.+.+ +..+++.++|||
T Consensus 86 e~i~~l~~~~--~~~gd~vl~~~Ptf~~Y~~~a~~~g~-~~~~v~~~--~-~~~d~~~~~~~~~~---~~~lv~i~nPNN 156 (356)
T COG0079 86 ELIELLVRAF--VEPGDTVLIPEPTFSMYEIAAQLAGA-EVVKVPLK--E-FRLDLDAILAAIRD---KTKLVFLCNPNN 156 (356)
T ss_pred HHHHHHHHHh--hcCCCEEEEcCCChHHHHHHHHhcCC-eEEEeccc--c-cccCHHHHHHhhhc---CCCEEEEeCCCC
Confidence 9999999987 67999999999999999999999999 99999873 2 78899999988864 334555578999
Q ss_pred CcHH-----HHHHHhhc--CeEEEeeCCceeeccCCC
Q psy6266 168 PTAQ-----QVAHMVDK--HHVYLLRSGRINMCGLTT 197 (218)
Q Consensus 168 PTG~-----~l~~l~~~--~~i~ii~D~r~~y~~l~~ 197 (218)
|||. +|.++++. .+.++|-| |+|.+|..
T Consensus 157 PTG~~~~~~~l~~l~~~~~~~~~vVvD--EAY~eF~~ 191 (356)
T COG0079 157 PTGTLLPREELRALLEALPEGGLVVID--EAYIEFSP 191 (356)
T ss_pred CCCCCCCHHHHHHHHHhCCCCcEEEEe--CchhhcCC
Confidence 9998 55555543 28899999 99999877
No 103
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.76 E-value=6.4e-18 Score=147.42 Aligned_cols=157 Identities=8% Similarity=0.043 Sum_probs=115.8
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEecc
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLS 85 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G 85 (218)
|+..|+|+.+. .+ ..+++.+ . . ...++|.+. +.++||+++++++ + +++++| ++|.|
T Consensus 30 ~~~~~~l~~ne----~~-~~~~~~~-----~-~---~~~~~Yp~~-~~~~Lr~aia~~~-~------~~~~~I--~it~G 85 (354)
T PRK04635 30 GRGDIWINANE----SP-FNNEYKL-----D-L---ARLNRYPEC-QPPELINAYSAYA-G------VAPEQI--LTSRG 85 (354)
T ss_pred CCCcEEeeCCC----CC-CCCChhh-----h-h---HHhccCCCC-CHHHHHHHHHHHh-C------cCHHHE--EEeCC
Confidence 44568999985 22 2233322 1 1 124568776 6899999999875 4 566776 59999
Q ss_pred ChhHHHHHHHHHHHhcCC-CeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 86 GTGALRVGAEFLHRILNY-TTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~g-d~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
+++++.++++++ +.|| |+|++++|+|+.|...++..|+ +++.+|+. +.+.+|++.++ .+ +++.+++.++
T Consensus 86 s~~~i~~~~~~~--~~~g~d~vlv~~P~y~~y~~~~~~~g~-~v~~v~~~--~~~~~~~~~l~-~~----~~~~li~i~n 155 (354)
T PRK04635 86 ADEAIELLIRAF--CEPGQDSIACFGPTYGMYAISAETFNV-GVKALPLT--ADYQLPLDYIE-QL----DGAKLVFICN 155 (354)
T ss_pred HHHHHHHHHHHh--cCCCCCeEEEcCCChHHHHHHHHHcCC-EEEEEecC--CCCCCCHHHHH-hc----cCCCEEEEeC
Confidence 999999999877 5688 9999999999999999999999 99999873 24567887775 23 2344455579
Q ss_pred CCCCcHH-----HHHHHhhc-CeEEEeeCCceeeccCCCC
Q psy6266 165 AHNPTAQ-----QVAHMVDK-HHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 165 p~NPTG~-----~l~~l~~~-~~i~ii~D~r~~y~~l~~~ 198 (218)
||||||. ++.++++. ++++||.| ++|..+...
T Consensus 156 P~NPTG~~~~~~~l~~l~~~~~~~~vivD--eay~~~~~~ 193 (354)
T PRK04635 156 PNNPTGTVIDRADIEQLIEMTPDAIVVVD--EAYIEFCPE 193 (354)
T ss_pred CCCCCCccCCHHHHHHHHHhCCCcEEEEe--CchHhhccC
Confidence 9999998 55666543 35999999 999987643
No 104
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.74 E-value=2e-17 Score=144.33 Aligned_cols=134 Identities=10% Similarity=0.160 Sum_probs=104.1
Q ss_pred CccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCC-CeEEecCCCchhHHHHHHH
Q psy6266 44 NHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNY-TTFYYSKPTWENHRLVFLN 122 (218)
Q Consensus 44 ~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~g-d~V~i~~P~y~~y~~~~~~ 122 (218)
..+|... -..+||+++++++ + +++++| ++|.|+++++.++++++ +.+| |+|++++|+|+.|...++.
T Consensus 51 ~~~Yp~~-~~~~l~~~~a~~~-g------~~~~~I--~~~~Gs~e~i~~~~~~~--~~~g~~~vli~~P~y~~y~~~~~~ 118 (351)
T PRK01688 51 LNRYPEC-QPKAVIENYAAYA-G------VKPEQV--LVSRGADEGIELLIRAF--CEPGKDAILYCPPTYGMYSVSAET 118 (351)
T ss_pred cccCCCC-ChHHHHHHHHHHh-C------CCHHHE--EEcCCHHHHHHHHHHHh--cCCCCCEEEEcCCCHHHHHHHHHH
Confidence 4568554 3589999999874 4 556776 59999999999999876 5787 9999999999999999999
Q ss_pred hCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhc--CeEEEeeCCceeeccC
Q psy6266 123 AGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDK--HHVYLLRSGRINMCGL 195 (218)
Q Consensus 123 ~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~--~~i~ii~D~r~~y~~l 195 (218)
.|+ +++.+++. + .+.+|++.+.+.+. ++.+++.++||||||. ++.++++. .+.+||.| |+|.+|
T Consensus 119 ~G~-~~~~v~~~-~-~~~~d~~~l~~~~~----~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivD--Eay~~f 189 (351)
T PRK01688 119 IGV-EIRTVPTL-D-NWQLDLPAIADNLD----GVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVAD--EAYIEF 189 (351)
T ss_pred cCC-EEEEeecC-C-CCCCCHHHHHHhcc----CCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEE--Cchhhc
Confidence 999 89999873 3 47889999988762 2334445799999998 44444432 26789999 999988
Q ss_pred CCC
Q psy6266 196 TTQ 198 (218)
Q Consensus 196 ~~~ 198 (218)
...
T Consensus 190 ~~~ 192 (351)
T PRK01688 190 CPQ 192 (351)
T ss_pred CCC
Confidence 743
No 105
>KOG0256|consensus
Probab=99.73 E-value=2.2e-17 Score=142.20 Aligned_cols=149 Identities=14% Similarity=0.096 Sum_probs=120.0
Q ss_pred ccCcCCCCcHHHHHHHHHHhcCC-CCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHh
Q psy6266 45 HEYLPVLGLESFSSAATRMLLGG-DASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNA 123 (218)
Q Consensus 45 ~~Y~~~~G~~~lr~aia~~~~~~-~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~ 123 (218)
..|.+..|+++||+++|+++-.. .+...++++++ ++|.|++.|...++-.| .+|||..++|.|+||....-++.-
T Consensus 115 a~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~--Vv~~G~T~ane~l~fcL--adpgdafLvPtPyY~gfdrdl~~r 190 (471)
T KOG0256|consen 115 AMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERV--VVTNGATSANETLMFCL--ADPGDAFLVPTPYYPGFDRDLRWR 190 (471)
T ss_pred hhcccccCchHHHHHHHHHHHHHhCCCCccCccce--EEecccchhhHHHHHHh--cCCCceeeecCCCCCcccccceec
Confidence 46999999999999999998221 33345788986 59999999999887766 689999999999999987655543
Q ss_pred -CCCcceeEeccCCcCccccHHHHHHHHhcC---CCCcEEEEcccCCCCcHH--------HHHHHhhcCeEEEeeCCcee
Q psy6266 124 -GFTEAREYRYWNPEKRAVDFTGMYEDLVNA---PDNSVIILHACAHNPTAQ--------QVAHMVDKHHVYLLRSGRIN 191 (218)
Q Consensus 124 -g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~---~~~~~iil~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~ 191 (218)
|. +++++.+..++.+.++.+++++++.++ ..+-.-+++.+|+||-|. .+.+++++++|-+|+| |+
T Consensus 191 Tgv-eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~D--EI 267 (471)
T KOG0256|consen 191 TGV-EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISD--EI 267 (471)
T ss_pred cCc-eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEee--hh
Confidence 66 888888887777888999999998764 122233444679999997 5788999999999999 99
Q ss_pred eccCCCCCH
Q psy6266 192 MCGLTTQNL 200 (218)
Q Consensus 192 y~~l~~~ni 200 (218)
|++=+|+.-
T Consensus 268 ya~sVF~~~ 276 (471)
T KOG0256|consen 268 YAGSVFDKS 276 (471)
T ss_pred hcccccCcc
Confidence 999888854
No 106
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.72 E-value=6e-17 Score=141.98 Aligned_cols=138 Identities=9% Similarity=0.095 Sum_probs=104.6
Q ss_pred CccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCC-CeEEecCCCchhHHHHHHH
Q psy6266 44 NHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNY-TTFYYSKPTWENHRLVFLN 122 (218)
Q Consensus 44 ~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~g-d~V~i~~P~y~~y~~~~~~ 122 (218)
..+|... +.++||+++++++ + +++++| ++|.|+++++.++++++ +.+| |.|++++|+|+.|...++.
T Consensus 53 ~~~Y~~~-~~~~lr~~ia~~~-~------~~~~~I--~~t~G~~~~l~~~~~~~--~~~g~~~vlv~~p~y~~~~~~~~~ 120 (364)
T PRK04781 53 TRRYPDP-QPPGLRSALAALY-G------CAPEQL--LIGRGSDEAIDLLVRAL--CVPGRDAVLVTPPVFGMYAVCARL 120 (364)
T ss_pred hccCCCC-CHHHHHHHHHHHh-C------cChHHE--EEeCCHHHHHHHHHHHh--cCCCCCeEEEcCCChHHHHHHHHH
Confidence 3458655 4799999999886 3 445665 59999999999999877 5788 8999999999999998899
Q ss_pred hCCCcceeEeccCC-cCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhh--cCeEEEeeCCceeecc
Q psy6266 123 AGFTEAREYRYWNP-EKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVD--KHHVYLLRSGRINMCG 194 (218)
Q Consensus 123 ~g~~~~~~~~~~~~-~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~--~~~i~ii~D~r~~y~~ 194 (218)
.|+ +++.+|+... +.+.+|++.+.+.+.. +++.+++.++||||||. ++.++++ +++++||.| ++|.+
T Consensus 121 ~g~-~~~~v~~~~~~~~~~~d~~~l~~~~~~--~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~D--eay~~ 195 (364)
T PRK04781 121 QNA-PLVEVPLVDGADGFHADVPAIVAAALA--SNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVD--EAYGE 195 (364)
T ss_pred cCC-EEEEEecCCCccCCCcCHHHHHHHHhc--cCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEe--Ccchh
Confidence 999 9999987422 2345688887665533 23444444689999998 4444443 247899999 99999
Q ss_pred CCCC
Q psy6266 195 LTTQ 198 (218)
Q Consensus 195 l~~~ 198 (218)
|.+.
T Consensus 196 f~~~ 199 (364)
T PRK04781 196 FSDV 199 (364)
T ss_pred hcCC
Confidence 8764
No 107
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.72 E-value=2.3e-16 Score=139.07 Aligned_cols=160 Identities=13% Similarity=0.009 Sum_probs=124.7
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCC---Cc----HHHHHHHHHHhcCCCCCCCcCCCc
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVL---GL----ESFSSAATRMLLGGDASPPLREGR 77 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~---G~----~~lr~aia~~~~~~~~~~~~~~~~ 77 (218)
.|.++|||+.|.|- | +.+++.++++..+..++ ....|+++. |. .+||+++++++.. ++
T Consensus 36 ~g~~~i~~~~~~~l---g-~~~~~~v~~~~~~~~~~--~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~---------~~ 100 (393)
T TIGR01822 36 DGREVLNFCANNYL---G-LSSHPDLIQAAKDALDE--HGFGMSSVRFICGTQDIHKELEAKIAAFLGT---------ED 100 (393)
T ss_pred CCceEEEeeCCCcc---c-cCCCHHHHHHHHHHHHH--hCCCCCCcCcccCChHHHHHHHHHHHHHhCC---------Cc
Confidence 68899999999752 2 45677888887776654 224688887 97 8999999988743 22
Q ss_pred eEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC---C
Q psy6266 78 AFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA---P 154 (218)
Q Consensus 78 v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~---~ 154 (218)
+ +++.|+++|+..++.++ ++|||+|++++|.|+++...++..++ +++.++ ..|++.+++.+++. .
T Consensus 101 ~--ii~~~~~~a~~~~~~~l--~~~gd~vi~~~~~~~s~~~~~~~~~~-~~~~~~-------~~d~~~l~~~i~~~~~~~ 168 (393)
T TIGR01822 101 T--ILYASCFDANGGLFETL--LGAEDAIISDALNHASIIDGVRLCKA-KRYRYA-------NNDMADLEAQLKEARAAG 168 (393)
T ss_pred E--EEECchHHHHHHHHHHh--CCCCCEEEEeccccHHHHHHHHhcCC-ceEEeC-------CCCHHHHHHHHHhhhhcC
Confidence 2 57789999999888776 68999999999999999998888887 664432 35788888888642 1
Q ss_pred CCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 155 DNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 155 ~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
.++++++....+||||. +|.++|++|++++|.| ++|.
T Consensus 169 ~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~D--e~~~ 210 (393)
T TIGR01822 169 ARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVD--ECHA 210 (393)
T ss_pred CCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEE--CCcc
Confidence 25666666778999997 8999999999999999 8884
No 108
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.71 E-value=6.6e-17 Score=139.89 Aligned_cols=143 Identities=12% Similarity=0.079 Sum_probs=102.0
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccC
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSG 86 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~ 86 (218)
+++|+|+.+. .+.+ ++++.+.+ ... ..|.. |..+||+++++++.. ++| ++|.|+
T Consensus 20 ~~~i~l~~ne--~p~~--~~~~~~~~---~~~------~~yp~--~~~~Lr~~ia~~~~~---------~~I--~it~Gs 73 (330)
T PRK05664 20 ADWLDLSTGI--APWP--WPVPAIPA---DAW------ARLPE--TDDGLEAAARAYYGA---------PQL--LPVAGS 73 (330)
T ss_pred HHheeecCCc--CCCC--CCCcccCH---HHH------HhCCC--ChHHHHHHHHHHhCC---------CCE--EECcCH
Confidence 3578999996 2333 22222322 111 23643 448999999998731 344 599999
Q ss_pred hhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCC
Q psy6266 87 TGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAH 166 (218)
Q Consensus 87 ~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~ 166 (218)
++++.+++. +.|||+|++++|+|+.|...++..|+ +++.++.. .+.+.+. ++.+++.++||
T Consensus 74 ~~al~~~~~----~~~gd~v~v~~P~y~~~~~~~~~~g~-~~~~v~~~----------~~~~~~~----~~~~v~l~nP~ 134 (330)
T PRK05664 74 QAAIQALPR----LRAPGRVGVLSPCYAEHAHAWRRAGH-QVRELDEA----------EVEAALD----SLDVLVVVNPN 134 (330)
T ss_pred HHHHHHHHH----ccCCCEEEEcCCChHHHHHHHHHcCC-eEEEechh----------hHhhhhc----CCCEEEEeCCc
Confidence 999998753 46999999999999999999999999 89888641 2333342 12234446899
Q ss_pred CCcHH--------HHHHHhhcCeEEEeeCCceeeccCC
Q psy6266 167 NPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLT 196 (218)
Q Consensus 167 NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~ 196 (218)
||||. +|++++++++++||+| |+|.++.
T Consensus 135 NPTG~~~s~~~l~~l~~~~~~~~~~iI~D--E~y~~~~ 170 (330)
T PRK05664 135 NPTGRRFDPARLLAWHARLAARGGWLVVD--EAFMDNT 170 (330)
T ss_pred CCCCCccCHHHHHHHHHHHHhcCCEEEEE--CCcccCC
Confidence 99998 5777788999999999 9998765
No 109
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.71 E-value=1.1e-16 Score=138.59 Aligned_cols=129 Identities=9% Similarity=0.073 Sum_probs=98.4
Q ss_pred ccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhC
Q psy6266 45 HEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAG 124 (218)
Q Consensus 45 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g 124 (218)
.+| |..-..+||+++++++. +.+++| ++|.|+++++.+++++ ++|| +|++++|+|+.|..+++..|
T Consensus 35 ~~Y-p~~~~~~lr~~ia~~~~-------~~~~~I--~it~Gs~~~l~~~~~~---~~~~-~vv~~~P~y~~y~~~~~~~G 100 (332)
T PRK06425 35 SIY-PEISYTDIEDQIKIYTQ-------GLKIKV--LIGPGLTHFIYRLLSY---INVG-NIIIVEPNFNEYKGYAFTHG 100 (332)
T ss_pred ccC-cCcCHHHHHHHHHHHhC-------CCcceE--EECCCHHHHHHHHHHH---hCCC-cEEEeCCChHHHHHHHHHcC
Confidence 457 44457999999998863 334554 6999999999998863 4576 57788999999999999999
Q ss_pred CCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCC
Q psy6266 125 FTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLT 196 (218)
Q Consensus 125 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~ 196 (218)
+ +++.+|+. . .++|.+.+ ++. +.+.+++ ++||||||. +|+++|++++++||+| |+|.++.
T Consensus 101 ~-~v~~vp~~-~--~~~~~~~l----~~~-~~k~v~l-~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~D--E~Y~~~~ 168 (332)
T PRK06425 101 I-RISALPFN-L--INNNPEIL----NNY-NFDLIFI-VSPDNPLGNLISRDSLLTISEICRKKGALLFID--EAFIDFV 168 (332)
T ss_pred C-eEEEEeCC-c--ccCcHHHH----hhc-CCCEEEE-eCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEe--cchhccc
Confidence 9 99999873 2 23454333 221 2234444 589999998 6888889999999999 9999998
Q ss_pred CCC
Q psy6266 197 TQN 199 (218)
Q Consensus 197 ~~n 199 (218)
++.
T Consensus 169 ~~~ 171 (332)
T PRK06425 169 PNR 171 (332)
T ss_pred ccc
Confidence 764
No 110
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.69 E-value=6.4e-16 Score=135.78 Aligned_cols=171 Identities=8% Similarity=-0.045 Sum_probs=125.8
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhc-CCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAAD-DSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
..|.++|||+.|.+ ..+.+++.++++..+..++ ......|.+..|.+++|+++++++.. ..+. ++. +++
T Consensus 30 ~~g~~~id~~~~~~----~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~-~~g~---~~~--i~~ 99 (385)
T TIGR01825 30 VNGKEVINLSSNNY----LGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAK-FKKT---EAA--LVF 99 (385)
T ss_pred ECCceEEEeeccCc----cCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHH-HhCC---CcE--EEE
Confidence 46889999999853 2355677888877666543 11234688899999999999999864 3221 222 356
Q ss_pred eccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC-CCCcEEEE
Q psy6266 83 TLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA-PDNSVIIL 161 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~iil 161 (218)
|.| +++..+++.++ ++|||+|++++|+|+++...++..|+ ++..++ .+|++.+++.+.+. .+++.+++
T Consensus 100 ~sG-~~a~~~a~~~~--~~~gd~vi~~~~~~~~~~~~~~~~g~-~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~ 168 (385)
T TIGR01825 100 QSG-FNTNQGVLSAL--LRKGDIVLSDELNHASIIDGLRLTKA-TKKIYK-------HADMDDLDRVLRENPSYGKKLIV 168 (385)
T ss_pred CcH-HHHHHHHHHHh--CCCCCEEEEEccccHHHHHHHHhcCC-ceEEeC-------CCCHHHHHHHHHhhccCCCeEEE
Confidence 666 55666666655 68999999999999999888888887 665542 35777777777643 23566777
Q ss_pred cccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccCCC
Q psy6266 162 HACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGLTT 197 (218)
Q Consensus 162 ~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l~~ 197 (218)
.+..+||||. +|.++|++|++++|.| ++|..+.+
T Consensus 169 ~~~v~~~tG~~~~~~~i~~l~~~~~~~li~D--e~~~~~~~ 207 (385)
T TIGR01825 169 TDGVFSMDGDVAPLPEIVELAERYGAVTYVD--DAHGSGVM 207 (385)
T ss_pred EecCCcCCCCccCHHHHHHHHHHhCCEEEEE--CcccccCc
Confidence 7788999996 8999999999999999 99976544
No 111
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.69 E-value=2.6e-16 Score=136.14 Aligned_cols=151 Identities=18% Similarity=0.130 Sum_probs=112.5
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEec
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTL 84 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~ 84 (218)
.++.+|+|+.|.. +.+ ++ +.+ ... ...++|.+..| ++||+++++++ + .++++| ++|.
T Consensus 15 ~~~~~~~~~~~~~--~~~----~~-~~~---~~~---~~~~~y~~~~~-~~lr~~la~~~-~------~~~~~i--~~t~ 71 (330)
T TIGR01140 15 PPEDWLDFSTGIN--PLG----PP-VPP---IPA---SAWARYPDPEY-DELRAAAAAYY-G------LPAASV--LPVN 71 (330)
T ss_pred ChhheeEccccCC--CCC----CC-hhh---cch---HHHhhCCCccH-HHHHHHHHHHh-C------CChhhE--EECC
Confidence 3567899999962 222 12 221 111 13467877776 99999999986 3 345665 5999
Q ss_pred cChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 85 SGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 85 G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
|+++++.+++.++ .+| .|++++|+|..|..+++..|. +++.++ |++.+++.+.+ .+. ++.++
T Consensus 72 G~~~~i~~~~~~l---~~g-~vl~~~p~y~~~~~~~~~~g~-~~~~~~---------d~~~l~~~~~~---~~~-v~i~~ 133 (330)
T TIGR01140 72 GAQEAIYLLPRLL---APG-RVLVLAPTYSEYARAWRAAGH-EVVELP---------DLDRLPAALEE---LDV-LVLCN 133 (330)
T ss_pred CHHHHHHHHHHHh---CCC-eEEEeCCCcHHHHHHHHHcCC-EEEEeC---------CHHHHHhhccc---CCE-EEEeC
Confidence 9999999976553 577 699999999999999999998 787774 66777776632 233 44478
Q ss_pred CCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 165 AHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 165 p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
||||||. +|+++|++|+++||.| ++|.++.++
T Consensus 134 p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~D--e~y~~~~~~ 173 (330)
T TIGR01140 134 PNNPTGRLIPPETLLALAARLRARGGWLVVD--EAFIDFTPD 173 (330)
T ss_pred CCCCCCCCCCHHHHHHHHHHhHhcCCEEEEE--CcccccCCc
Confidence 9999997 6788889999999999 999988765
No 112
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.68 E-value=5.6e-16 Score=136.33 Aligned_cols=165 Identities=12% Similarity=-0.010 Sum_probs=122.3
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccC---cCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEY---LPVLGLESFSSAATRMLLGGDASPPLREGRAFG 80 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y---~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~ 80 (218)
..|.++|||+.|.| ..+.+++.+.++.++..++ ....| ....|.+++|+++++++.. ..+. +++ +
T Consensus 39 ~~g~~~i~l~~~~~----~~~~~~~~i~~a~~~~~~~--~~~~~~~~~~~~G~~~l~~~l~~~la~-~~g~---~~~--i 106 (397)
T PRK06939 39 ADGKEVINFCANNY----LGLANHPELIAAAKAALDS--HGFGMASVRFICGTQDLHKELEEKLAK-FLGT---EDA--I 106 (397)
T ss_pred cCCCeEEEeeccCc----cccCCCHHHHHHHHHHHHH--cCCCCcccccccCCcHHHHHHHHHHHH-HhCC---CcE--E
Confidence 46899999999964 2345788888887776643 12234 3357999999988888754 3321 233 3
Q ss_pred EEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC---CCCc
Q psy6266 81 VQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA---PDNS 157 (218)
Q Consensus 81 ~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~---~~~~ 157 (218)
++|.| ++++..+++++ ++|||+|++++|+|+++...++..|+ +++.++. .|++.+++.+++. ..++
T Consensus 107 ~~tsG-~~a~~~~~~~l--~~~gd~vi~~~~~~~~~~~~~~~~~~-~~~~~~~-------~d~~~l~~~i~~~~~~~~~~ 175 (397)
T PRK06939 107 LYSSC-FDANGGLFETL--LGKEDAIISDALNHASIIDGVRLCKA-KRYRYAN-------NDMADLEAQLKEAKEAGARH 175 (397)
T ss_pred EEcCh-HHHHHHHHHHh--CCCCCEEEEEhhhhHHHHHHHHhcCC-ceEEeCC-------CCHHHHHHHHHhhhccCCCC
Confidence 46666 77887777766 78999999999999999999999998 7776643 3677777777542 1255
Q ss_pred EEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 158 VIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 158 ~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
++++....+||||. +|.++|++|+++||+| ++|+
T Consensus 176 ~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~D--e~~~ 214 (397)
T PRK06939 176 KLIATDGVFSMDGDIAPLPEICDLADKYDALVMVD--DSHA 214 (397)
T ss_pred eEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEE--Cccc
Confidence 66665567899996 8999999999999999 9995
No 113
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.66 E-value=4.1e-15 Score=127.76 Aligned_cols=170 Identities=16% Similarity=0.061 Sum_probs=120.2
Q ss_pred eeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhH
Q psy6266 10 CCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGA 89 (218)
Q Consensus 10 i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~a 89 (218)
|||+.|.+ .+.+++.+..+..+.... .....|.+..|+.+|++++++++.. ..+.....++ +++|.|++++
T Consensus 1 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~l~~-~~~~~~~~~~--~~~~~~~t~a 71 (350)
T cd00609 1 IDLSIGEP-----DFPPPPEVLEALAAAALR-AGLLGYYPDPGLPELREAIAEWLGR-RGGVDVPPEE--IVVTNGAQEA 71 (350)
T ss_pred CCCCCCCC-----CCCCCHHHHHHHHHHhhc-cCCCCCCCCCCcHHHHHHHHHHHHH-HhCCCCCcce--EEEecCcHHH
Confidence 58888964 344555555554432211 2456799999999999999999865 4332122333 4689999999
Q ss_pred HHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccH--HHHHHHHhcCCCCcEEEEcccCCC
Q psy6266 90 LRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDF--TGMYEDLVNAPDNSVIILHACAHN 167 (218)
Q Consensus 90 l~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~--~~~~~~l~~~~~~~~iil~~~p~N 167 (218)
+..++.++ ..+||+|++++|+|+++..+++..|. +++.++... ....+. +.+.... .++..+++..+++|
T Consensus 72 ~~~~~~~~--~~~g~~vl~~~~~~~~~~~~~~~~~~-~~~~i~~~~--~~~~~~~~~~~~~~~---~~~~~~v~i~~~~~ 143 (350)
T cd00609 72 LSLLLRAL--LNPGDEVLVPDPTYPGYEAAARLAGA-EVVPVPLDE--EGGFLLDLELLEAAK---TPKTKLLYLNNPNN 143 (350)
T ss_pred HHHHHHHh--CCCCCEEEEcCCCchhHHHHHHHCCC-EEEEEeccc--ccCCccCHHHHHhhc---CccceEEEEECCCC
Confidence 99988877 56899999999999999999999998 899998742 223332 3333322 23333344445999
Q ss_pred CcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 168 PTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 168 PTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
|||. +|.++|+++++++|.| ++|.++.+.
T Consensus 144 ~tG~~~~~~~l~~l~~~~~~~~~~~ivD--~a~~~~~~~ 180 (350)
T cd00609 144 PTGAVLSEEELEELAELAKKHGILIISD--EAYAELVYD 180 (350)
T ss_pred CCCcccCHHHHHHHHHHHHhCCeEEEEe--cchhhceeC
Confidence 9998 4558999999999999 888876543
No 114
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.62 E-value=2.1e-14 Score=124.40 Aligned_cols=167 Identities=13% Similarity=-0.040 Sum_probs=116.6
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhc-CCCCccCcCCCC----cHHHHHHHHHHhcCCCCCCCcCCCce
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAAD-DSLNHEYLPVLG----LESFSSAATRMLLGGDASPPLREGRA 78 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~Y~~~~G----~~~lr~aia~~~~~~~~~~~~~~~~v 78 (218)
..|..+|||+.|. +-| ++.++.|+++.++.+++ ......|....| ..+||+++++++.. ++.
T Consensus 13 ~~g~~~id~~~~~---~~g-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~--------~~~- 79 (360)
T TIGR00858 13 RDGRRLLNFSSND---YLG-LASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGT--------EAA- 79 (360)
T ss_pred ECCceEEecccCC---ccc-CCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC--------CCE-
Confidence 5799999999994 223 45577788887776643 111112322334 45588888877521 232
Q ss_pred EEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCC-CCc
Q psy6266 79 FGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAP-DNS 157 (218)
Q Consensus 79 ~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~~~ 157 (218)
++.|.| ++++..+++++ +.|||+|++++|+|+.+...++..|+ +++.++. +|++.+++.+++.. +++
T Consensus 80 -i~~~~G-~~~~~~~l~~~--~~~gd~v~~~~~~~~~~~~~~~~~g~-~~~~~~~-------~d~~~l~~~~~~~~~~~~ 147 (360)
T TIGR00858 80 -LLFSSG-YLANVGVISAL--VGKGDLILSDALNHASLIDGCRLSGA-RVRRYRH-------NDVEHLERLLEKNRGERR 147 (360)
T ss_pred -EEECch-HHHHHHHHHHh--CCCCCEEEEEccccHHHHHHHHhcCC-ceEEecC-------CCHHHHHHHHHHcccCCC
Confidence 345666 45544455554 57999999999999999999999998 7776643 47788888776532 345
Q ss_pred EEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccCCC
Q psy6266 158 VIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGLTT 197 (218)
Q Consensus 158 ~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l~~ 197 (218)
.+++..+++||||. +|.++|+++++++|.| ++|....+
T Consensus 148 ~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~D--e~~~~~~~ 190 (360)
T TIGR00858 148 KLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVD--DAHGTGVL 190 (360)
T ss_pred eEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEE--CcccccCc
Confidence 66666788999995 7999999999999999 89875433
No 115
>KOG0634|consensus
Probab=99.61 E-value=7.1e-15 Score=127.61 Aligned_cols=146 Identities=14% Similarity=0.039 Sum_probs=118.5
Q ss_pred CCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHH
Q psy6266 43 LNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLN 122 (218)
Q Consensus 43 ~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~ 122 (218)
...+|.++.|+++|+..+.++..-..+.+ ...+ .-+++|.|.+.+++.+++.+ +|+||.|++..++|++.....+.
T Consensus 92 ~alQYg~s~G~peLl~fik~h~~~~ih~p-~~~~-wdiiit~G~t~~l~~~l~~~--~N~gd~vlie~~ty~~AL~s~~a 167 (472)
T KOG0634|consen 92 RALQYGQSSGIPELLLFIKDHNRPTIHAP-PYKN-WDIIITNGNTDGLFKVLRTL--INRGDHVLIEEYTYPSALQSMEA 167 (472)
T ss_pred hhhccccccCcHHHHHHHHHhccccccCC-CCCC-ceEEEecCCchHHHHHHHHh--hcCCCceEEecccchHHHHhccc
Confidence 34689999999999999998764102222 2222 33579999999999999987 79999999999999999999999
Q ss_pred hCCCcceeEeccCCcCccccHHHHHHHHhcCC------C-CcEEEEcccCCCCcHH--------HHHHHhhcCeEEEeeC
Q psy6266 123 AGFTEAREYRYWNPEKRAVDFTGMYEDLVNAP------D-NSVIILHACAHNPTAQ--------QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 123 ~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~------~-~~~iil~~~p~NPTG~--------~l~~l~~~~~i~ii~D 187 (218)
.|+ +++.+++ +..+++.+.+++.+.+.. + ..+++.+++.|||||. +|.+||++|++.||+|
T Consensus 168 ~gv-~~ipv~m---d~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeD 243 (472)
T KOG0634|consen 168 LGV-KIIPVKM---DQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVED 243 (472)
T ss_pred cCc-eEEeccc---cCCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEec
Confidence 998 8888876 345899999998886531 1 2467888999999997 7999999999999999
Q ss_pred CceeeccCCCC
Q psy6266 188 GRINMCGLTTQ 198 (218)
Q Consensus 188 ~r~~y~~l~~~ 198 (218)
+.|.-|.+.
T Consensus 244 --dpYy~Lq~~ 252 (472)
T KOG0634|consen 244 --DPYYFLQMN 252 (472)
T ss_pred --Cccceeecc
Confidence 888866655
No 116
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.61 E-value=2.1e-14 Score=127.01 Aligned_cols=156 Identities=13% Similarity=0.009 Sum_probs=113.7
Q ss_pred CCccCchHHHHHHHHHhhcCCCCccCcCC-------CCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHH
Q psy6266 22 CKPWVLPVVRQAEKELAADDSLNHEYLPV-------LGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGA 94 (218)
Q Consensus 22 ~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~-------~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~ 94 (218)
+--+.|+.|.+|..+..+.......+.+. ..++++|+++++++.. . ++++| +.|.|+++++.+++
T Consensus 24 ~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~-~-----~~~~i--~~t~g~t~~l~~~~ 95 (398)
T TIGR03392 24 ATALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNA-P-----DAENI--VWTRGTTESINLVA 95 (398)
T ss_pred cccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCC-C-----CCCeE--EEeCChHHHHHHHH
Confidence 33367888999887766431122223332 2356799999987632 1 23554 58999999999998
Q ss_pred HHHH--HhcCCCeEEecCCCchh----HHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCC
Q psy6266 95 EFLH--RILNYTTFYYSKPTWEN----HRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNP 168 (218)
Q Consensus 95 ~~l~--~l~~gd~V~i~~P~y~~----y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NP 168 (218)
+++. .+.+||+|++++|.|++ +....+..|+ +++.++.. . .+.+|++.+++.+. +++.++..+.+|||
T Consensus 96 ~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~-~v~~v~~~-~-~~~~~~~~l~~~i~---~~t~lv~i~~~~n~ 169 (398)
T TIGR03392 96 QSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGA-KVVKLPIG-A-DLLPDIRQLPELLT---PRTRILALGQMSNV 169 (398)
T ss_pred HHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCc-EEEEEecC-C-CCCcCHHHHHHHhc---cCceEEEEECcccc
Confidence 8763 14689999999999876 4455677898 89998873 2 35678999988885 34556666789999
Q ss_pred cHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 169 TAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 169 TG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
||. +|.++|++++++++.| ++|.
T Consensus 170 tG~~~~~~~i~~~~~~~~~~~ivD--~a~~ 197 (398)
T TIGR03392 170 TGGCPDLARAITLAHQYGAVVVVD--GAQG 197 (398)
T ss_pred ccccCCHHHHHHHHHHcCCEEEEE--hhhh
Confidence 998 7899999999999999 7875
No 117
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.60 E-value=1.1e-14 Score=128.50 Aligned_cols=162 Identities=14% Similarity=0.084 Sum_probs=116.1
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcC-----CCCcHHHHHHHHHHhcCCCCCCCcCCCceEE
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLP-----VLGLESFSSAATRMLLGGDASPPLREGRAFG 80 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~-----~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~ 80 (218)
+..+++|++|.+ ++++|+.+.++..++ . ..+.|++ +.|.+++|+++++++.. ..+ .+.+++.
T Consensus 19 ~~~~~~l~~g~~-----~~~~p~~~~~~~~~~--~--~~~~~~~~~~~~~~g~~~~~~~~~~~la~-~~g--~~~~~v~- 85 (398)
T cd00613 19 DQSMSFLGSGTY-----KHNPPAVIKRNILEN--E--FYTAYTPYQPEISQGRLQALFELQTMLCE-LTG--MDVANAS- 85 (398)
T ss_pred ccCccccccccc-----CCcCcHHHHHHhccc--c--CcccCCCCChhhhhhHHHHHHHHHHHHHH-HHC--CCcccee-
Confidence 456799999953 357788888766655 2 2456777 89999999999998854 332 2223442
Q ss_pred EEec-cChhHHHHHHHHHHHhcC--CCeEEecCCCchhHHHHHHHhC----CCcceeEeccCCcCccccHHHHHHHHhcC
Q psy6266 81 VQTL-SGTGALRVGAEFLHRILN--YTTFYYSKPTWENHRLVFLNAG----FTEAREYRYWNPEKRAVDFTGMYEDLVNA 153 (218)
Q Consensus 81 ~~t~-G~~~al~~~~~~l~~l~~--gd~V~i~~P~y~~y~~~~~~~g----~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 153 (218)
++. |++++...+..++ +++ ||+|++++|.|+.|...+...| + +++.++.. +.+.+|++.+++.+.
T Consensus 86 -~~~~g~~~~~~~~~~~~--~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~-~~~~v~~~--~~~~~d~~~l~~~i~-- 157 (398)
T cd00613 86 -LQDEATAAAEAAGLAAI--RAYHKRNKVLVPDSAHPTNPAVARTRGEPLGI-EVVEVPSD--EGGTVDLEALKEEVS-- 157 (398)
T ss_pred -ccCchHHHHHHHHHHHH--hcccCCCEEEEcCccCcchHHHHHHhcccCCc-EEEEeccC--CCCCcCHHHHHHhcC--
Confidence 444 5555544444443 455 9999999999999999988888 8 78888762 234678888888774
Q ss_pred CCCcEEEEcccCCCCcHH------HHHHHhhcCeEEEeeCCceee
Q psy6266 154 PDNSVIILHACAHNPTAQ------QVAHMVDKHHVYLLRSGRINM 192 (218)
Q Consensus 154 ~~~~~iil~~~p~NPTG~------~l~~l~~~~~i~ii~D~r~~y 192 (218)
+++.+++.++| ||||. +|.++|++|++++|.| +++
T Consensus 158 -~~t~~viv~~~-~~~G~~~~~l~~i~~la~~~g~~livD--~~~ 198 (398)
T cd00613 158 -EEVAALMVQYP-NTLGVFEDLIKEIADIAHSAGALVYVD--GDN 198 (398)
T ss_pred -CCeEEEEEECC-CCCceecchHHHHHHHHHhcCCEEEEE--ecc
Confidence 34555555566 49996 7889999999999999 554
No 118
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.59 E-value=5e-15 Score=128.71 Aligned_cols=120 Identities=10% Similarity=0.061 Sum_probs=87.6
Q ss_pred cCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCC
Q psy6266 46 EYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGF 125 (218)
Q Consensus 46 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~ 125 (218)
+|... - .+||+++++++.- ..+++| ++|.|+++++.++..+ +++|| |++++|+|+.|...++..|+
T Consensus 50 ~Yp~~-~-~~L~~~ia~~~~~------~~~~~I--~i~~Gs~e~i~~l~~~---~~~g~-v~v~~P~y~~y~~~~~~~g~ 115 (339)
T PRK06959 50 RLPED-D-DGLAACAARYYGA------PDAAHV--LPVAGSQAAIRALPAL---LPRGR-VGIAPLAYSEYAPAFARHGH 115 (339)
T ss_pred hCCCc-h-HHHHHHHHHHhCC------CCcccE--EECcCHHHHHHHHHHh---cCCCe-EEEcCCCcHHHHHHHHHCCC
Confidence 47644 3 8999999988732 223565 5999999999876543 46776 88999999999999999999
Q ss_pred CcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCC
Q psy6266 126 TEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTT 197 (218)
Q Consensus 126 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~ 197 (218)
+++.++.. . + .+.+ ...+++.++||||||. ++++.++++++++|.| |+|.++.+
T Consensus 116 -~~~~v~~~-~-------~----~~~~---~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~D--Eay~~~~~ 177 (339)
T PRK06959 116 -RVVPLDEA-A-------D----TLPA---ALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVD--EAFADTLP 177 (339)
T ss_pred -EEEeeccc-c-------h----hccc---cCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEE--CCCccCCC
Confidence 88877541 1 1 1211 1123445789999998 3445556788999999 99999865
No 119
>PLN02721 threonine aldolase
Probab=99.57 E-value=2.5e-14 Score=123.93 Aligned_cols=158 Identities=12% Similarity=0.036 Sum_probs=108.4
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccCh
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGT 87 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~ 87 (218)
.+|||+-+.. . .+++.+++|+.....+ .....|.|. ..+||+++++++.. . .+ +++.+|+
T Consensus 6 ~~~~~~~~~~-----~-~~~~~~~~a~~~~~~~-~~~~~~~~~--~~~l~~~la~~~~~-~--------~~--~~~~~Gs 65 (353)
T PLN02721 6 RVVDLRSDTV-----T-KPTDAMRAAMANAEVD-DDVLGYDPT--ALRLEEEMAKIFGK-E--------AA--LFVPSGT 65 (353)
T ss_pred hhhhhhcccc-----c-CCCHHHHHHHHhccCC-CcccCCCHH--HHHHHHHHHHHhCC-c--------ee--EEecCcc
Confidence 4678888863 1 3578888887654211 223445444 79999999998843 1 22 3555566
Q ss_pred hHHHHHHHHHHHhc-CCCeEEecCCCch-hHHH--HHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC----CCCc-E
Q psy6266 88 GALRVGAEFLHRIL-NYTTFYYSKPTWE-NHRL--VFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA----PDNS-V 158 (218)
Q Consensus 88 ~al~~~~~~l~~l~-~gd~V~i~~P~y~-~y~~--~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~----~~~~-~ 158 (218)
++..+++.++ +. +||+|++++|+|. .|.. .....|+ +++.++. .+.+.+|++.+++.+++. .+++ .
T Consensus 66 ~a~~~~l~~~--~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~-~~~~v~~--~~~~~~d~~~l~~~i~~~~~~~~~~~~~ 140 (353)
T PLN02721 66 MGNLISVLVH--CDVRGSEVILGDNSHIHLYENGGISTLGGV-HPRTVKN--NEDGTMDLDAIEAAIRPKGDDHFPTTRL 140 (353)
T ss_pred HHHHHHHHHH--ccCCCCeEEEcCccceehhcccchhhhcCc-eeEecCC--CcCCCcCHHHHHHHHHhccCCCCCcceE
Confidence 6655555544 45 8999999999975 4442 5667788 8888876 234568999999988632 0233 4
Q ss_pred EEEcccCCCCcHH--------HHHHHhhcCeEEEeeCCceee
Q psy6266 159 IILHACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINM 192 (218)
Q Consensus 159 iil~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y 192 (218)
+++.+.+|||||. +|.++|++++++++.| ++|
T Consensus 141 v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD--~a~ 180 (353)
T PLN02721 141 ICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHID--GAR 180 (353)
T ss_pred EEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEE--chh
Confidence 5555678999995 6888899999999999 655
No 120
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.56 E-value=1.1e-13 Score=121.23 Aligned_cols=167 Identities=15% Similarity=-0.002 Sum_probs=112.9
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhc-CCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAAD-DSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
.|..+|||+.|.+ -| +.+++.|.+|.++.+.. ......|....|...+++.+.+.+.. ..+ .++. +++
T Consensus 37 ~g~~~id~~~~~~---~g-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~-~~~----~~~~--i~~ 105 (385)
T PRK05958 37 DGRRMLNFASNDY---LG-LARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAE-WFG----AERA--LLF 105 (385)
T ss_pred CCceEEEeeCCCc---cc-CCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHH-HhC----CCcE--EEE
Confidence 7899999999952 12 34577888887766643 11122344555654444444443322 111 1222 345
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcc
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~ 163 (218)
.+++++...+++++ ++|||+|++++|+|+.+...++..|+ +++.++. .|++.+++.++...+++.+++..
T Consensus 106 ~~g~~~~~~~l~~~--~~~gd~V~~~~~~~~~~~~~~~~~g~-~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~~ 175 (385)
T PRK05958 106 SSGYAANLAVLTAL--AGKGDLIVSDKLNHASLIDGARLSRA-RVRRYPH-------NDVDALEALLAKWRAGRALIVTE 175 (385)
T ss_pred CcHHHHHHHHHHHh--CCCCCEEEEeCccCHHHHHHHHhcCC-ceEEeCC-------CCHHHHHHHHHhccCCCeEEEEE
Confidence 55566665555554 67999999999999999999898888 7777643 26778888776432235566667
Q ss_pred cCCCCcHH-----HHHHHhhcCeEEEeeCCceeecc
Q psy6266 164 CAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCG 194 (218)
Q Consensus 164 ~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~ 194 (218)
.++||||. +|.++|++|++++|.| ++|..
T Consensus 176 ~~~~~~G~~~~l~~i~~ia~~~~~~li~D--e~~~~ 209 (385)
T PRK05958 176 SVFSMDGDLAPLAELVALARRHGAWLLVD--EAHGT 209 (385)
T ss_pred ecccCCCCcCCHHHHHHHHHHhCCEEEEE--Ccccc
Confidence 78999996 8999999999999999 89864
No 121
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.54 E-value=2.5e-13 Score=120.26 Aligned_cols=161 Identities=13% Similarity=0.056 Sum_probs=114.8
Q ss_pred EeCCCCCccCchHHHHHHHHHhhcCCCC-ccCcC------CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhH
Q psy6266 17 YRTEECKPWVLPVVRQAEKELAADDSLN-HEYLP------VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGA 89 (218)
Q Consensus 17 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~~Y~~------~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~a 89 (218)
|-|..+..+.++.|.+|..+..++.... ++... ..-++++|+++++++.. .++++| +.|.|++++
T Consensus 22 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~------~~~~~i--~~~~~~t~~ 93 (401)
T PRK10874 22 YLDSAATALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNA------PDAKNI--VWTRGTTES 93 (401)
T ss_pred EEeCCcccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCC------CCCCEE--EEECCHHHH
Confidence 3334444467889999987776431111 11110 12267899999887632 134554 589999999
Q ss_pred HHHHHHHHH--HhcCCCeEEecCCCchh----HHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcc
Q psy6266 90 LRVGAEFLH--RILNYTTFYYSKPTWEN----HRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 90 l~~~~~~l~--~l~~gd~V~i~~P~y~~----y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~ 163 (218)
+.++++++. .+.|||+|++++|.|++ +....+..|+ +++.++.. +.+.+|++.+++.+. +++.++..+
T Consensus 94 i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~-~v~~v~~~--~~~~~d~~~l~~~i~---~~t~lv~i~ 167 (401)
T PRK10874 94 INLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGA-KVVKLPLG--ADRLPDVDLLPELIT---PRTRILALG 167 (401)
T ss_pred HHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCC-EEEEEecC--CCCcCCHHHHHHhcC---cCcEEEEEe
Confidence 999888763 24689999999999875 4455677788 88888872 235678999988884 345666668
Q ss_pred cCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 164 CAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 164 ~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
++|||||. +|.++|++++++++.| +++.
T Consensus 168 ~~~n~tG~~~~~~~i~~l~~~~g~~~ivD--~a~~ 200 (401)
T PRK10874 168 QMSNVTGGCPDLARAITLAHQAGMVVMVD--GAQG 200 (401)
T ss_pred CCcccccCcCCHHHHHHHHHHcCCEEEEE--CCcc
Confidence 89999998 7999999999999999 7774
No 122
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.53 E-value=6.4e-14 Score=124.43 Aligned_cols=126 Identities=13% Similarity=0.116 Sum_probs=98.6
Q ss_pred cCc--CCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHH---
Q psy6266 46 EYL--PVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVF--- 120 (218)
Q Consensus 46 ~Y~--~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~--- 120 (218)
.|+ +..+..+|+++++++..+ +. .+++.+|++|+..++.++ ++|||+|++++|.|+.+...+
T Consensus 57 ~Y~r~~~p~~~~Le~~iA~~~g~---------~~--~l~~~sG~~Ai~~al~~l--l~~Gd~Vl~~~~~y~~~~~~~~~~ 123 (400)
T PRK06234 57 IYSRLGNPTSTEVENKLALLEGG---------EA--AVVAASGMGAISSSLWSA--LKAGDHVVASDTLYGCTFALLNHG 123 (400)
T ss_pred cccCCCCccHHHHHHHHHHHhCC---------Cc--EEEEcCHHHHHHHHHHHH--hCCCCEEEEecCccchHHHHHHHH
Confidence 377 888999999999998743 12 358899999998887766 689999999999998766543
Q ss_pred -HHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcC--eEEEeeCCceee
Q psy6266 121 -LNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKH--HVYLLRSGRINM 192 (218)
Q Consensus 121 -~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~--~i~ii~D~r~~y 192 (218)
+..|+ +++.++. .|++.+++.+. +++.+++.++|+||||. +|.++|+++ +++++.| ++|
T Consensus 124 ~~~~G~-~v~~vd~-------~d~e~l~~~i~---~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~~i~livD--ea~ 190 (400)
T PRK06234 124 LTRYGV-EVTFVDT-------SNLEEVRNALK---ANTKVVYLETPANPTLKVTDIKAISNIAHENNKECLVFVD--NTF 190 (400)
T ss_pred HhhCCe-EEEEECC-------CCHHHHHHHhc---cCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCCCCEEEEE--CCC
Confidence 56787 7777643 26778887775 34556666799999997 799999997 9999999 888
Q ss_pred ccCCC
Q psy6266 193 CGLTT 197 (218)
Q Consensus 193 ~~l~~ 197 (218)
....+
T Consensus 191 ~~~~~ 195 (400)
T PRK06234 191 CTPYI 195 (400)
T ss_pred Cchhc
Confidence 76543
No 123
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.52 E-value=2.2e-13 Score=119.26 Aligned_cols=151 Identities=11% Similarity=0.073 Sum_probs=109.2
Q ss_pred cCchHHHHHHHHHhhcCCCCc---cCcC----CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHH
Q psy6266 25 WVLPVVRQAEKELAADDSLNH---EYLP----VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFL 97 (218)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~---~Y~~----~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l 97 (218)
++|+.+.++..+..++..... .|.. ..+..++|+.+++++.. . ..++| +.|.|+++++.+++..+
T Consensus 11 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~-----~~~~v--~~~~g~t~al~~~~~~~ 82 (376)
T TIGR01977 11 PKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNA-P-----SSAHV--VFTNNATTALNIALKGL 82 (376)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCc-C-----CCCeE--EEeCCHHHHHHHHHHhc
Confidence 567889988877665411111 2332 26678999999887632 1 22344 58899999999888765
Q ss_pred HHhcCCCeEEecCCCchhHHH----HHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH--
Q psy6266 98 HRILNYTTFYYSKPTWENHRL----VFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-- 171 (218)
Q Consensus 98 ~~l~~gd~V~i~~P~y~~y~~----~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-- 171 (218)
+.+||+|+++++.|+++.. +.+..|+ +++.++.. ..+.+|.+.+++.+. +++.+++.++||||||.
T Consensus 83 --~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~-~~~~v~~~--~~~~~d~~~l~~~~~---~~~~~v~~~~~~n~tG~~~ 154 (376)
T TIGR01977 83 --LKEGDHVITTPMEHNSVARPLECLKEQIGV-EITIVKCD--NEGLISPERIKRAIK---TNTKLIVVSHASNVTGTIL 154 (376)
T ss_pred --cCCCCEEEECcchhhHHHHHHHHHHHHcCc-EEEEEecC--CCCCcCHHHHHHhcC---CCCeEEEEECCCCCccccC
Confidence 6799999999999988754 3344488 88888762 235678999988884 34455556789999998
Q ss_pred ---HHHHHhhcCeEEEeeCCceeec
Q psy6266 172 ---QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 172 ---~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+|.++|++++++++.| ++..
T Consensus 155 ~~~~i~~l~~~~~~~livD--~a~~ 177 (376)
T TIGR01977 155 PIEEIGELAQENGIFFILD--AAQT 177 (376)
T ss_pred CHHHHHHHHHHcCCEEEEE--hhhc
Confidence 7999999999999999 5543
No 124
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.52 E-value=3.3e-13 Score=118.45 Aligned_cols=161 Identities=12% Similarity=0.064 Sum_probs=120.3
Q ss_pred CCCC-ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 4 SSGE-IHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 4 ~~~~-~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
+.|- ++||.+ |.+ ..-|-..+++.|.+|+.+..++ |. +.+++++++.+++.. ..+ .++ ++.
T Consensus 4 ~~~~~~~ina~-g~~-t~~g~s~~~~~v~~a~~~~~~~------~~---~~~~~~~~~~~~~a~-~~g----~~~--~~~ 65 (363)
T TIGR01437 4 KYGLKKVINAS-GKM-TILGVSTVSDEVADAQKRGAQN------YF---EIKELVNKTGEYIAN-LLG----VED--AVI 65 (363)
T ss_pred cCCCceEEECC-cEe-ecCCCCCCCHHHHHHHHHHHhc------CC---CHHHHHHHHHHHHHH-hhC----CCe--EEE
Confidence 4454 788876 444 3445556899999988876532 43 567888887777643 222 133 369
Q ss_pred eccChhHHHHHHHHHHHhcCCC---------------eEEecCCCchhH----HHHHHHhCCCcceeEeccCCcCccccH
Q psy6266 83 TLSGTGALRVGAEFLHRILNYT---------------TFYYSKPTWENH----RLVFLNAGFTEAREYRYWNPEKRAVDF 143 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~gd---------------~V~i~~P~y~~y----~~~~~~~g~~~~~~~~~~~~~~~~~d~ 143 (218)
|.|++.|+.++++++ +.+|| +|+++.|.|.+| ...+...|+ +++.++. .+.+|+
T Consensus 66 ~~g~t~al~~al~al--~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~-~~v~v~~----~~~~d~ 138 (363)
T TIGR01437 66 VSSASAGIAQSVAAV--ITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGG-KVVEAGY----ANECSA 138 (363)
T ss_pred EcCHHHHHHHHHHHH--hcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCC-eEEEEcC----CCCCCH
Confidence 999999999999887 67888 999999999887 467788899 8988864 245899
Q ss_pred HHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 144 TGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 144 ~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+.+++++.+. ...+++.++||||||. +|.++|++|+++++.| ++++
T Consensus 139 ~~le~ai~~~--t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD--~a~~ 189 (363)
T TIGR01437 139 EQLEAAITEK--TAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVD--AAAE 189 (363)
T ss_pred HHHHHhcChh--ceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEE--CCCC
Confidence 9999988632 1234445789999996 7999999999999999 7775
No 125
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.49 E-value=5.3e-13 Score=117.72 Aligned_cols=143 Identities=9% Similarity=-0.015 Sum_probs=107.2
Q ss_pred cCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCC
Q psy6266 25 WVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYT 104 (218)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd 104 (218)
...+.-+++..+++.. +.. .+.....+|++++++++.. . . ++.|.|+++|+.+++.++. +.|||
T Consensus 11 ~~~~~e~~~~~~~l~~--~~~--~~g~~~~~le~~la~~~g~-~--------~--~v~~~sgt~al~lal~al~-~~~Gd 74 (379)
T PRK11658 11 AMGDEELAAVKEVLRS--GWI--TTGPKNQALEQAFCQLTGN-Q--------H--AIAVSSATAGMHITLMALG-IGPGD 74 (379)
T ss_pred CCCHHHHHHHHHHHHc--CCc--cCCHhHHHHHHHHHHHhCC-C--------e--EEEECCHHHHHHHHHHHcC-CCCCC
Confidence 3345556666665543 222 2344589999999987743 1 2 3578899999999887652 46899
Q ss_pred eEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhc
Q psy6266 105 TFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDK 179 (218)
Q Consensus 105 ~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~ 179 (218)
+|++++|+|+.+...+...|+ +++.++.. .+.+.+|++.+++.+. +++.+++ |+||||. +|.++|++
T Consensus 75 ~Viv~~~~~~~~~~~~~~~G~-~~v~vd~~-~~~~~~d~~~l~~~i~---~~tkav~---~~~~~G~~~d~~~i~~~a~~ 146 (379)
T PRK11658 75 EVITPSLTWVSTLNMIVLLGA-TPVMVDVD-RDTLMVTPEAIEAAIT---PRTKAII---PVHYAGAPADLDAIRAIGER 146 (379)
T ss_pred EEEECCCcHHHHHHHHHHcCC-EEEEEecC-CCcCCcCHHHHHHhcc---cCCeEEE---EeCCCCCcCCHHHHHHHHHH
Confidence 999999999999999999999 99999873 4455679999988875 3445444 5677886 79999999
Q ss_pred CeEEEeeCCceeec
Q psy6266 180 HHVYLLRSGRINMC 193 (218)
Q Consensus 180 ~~i~ii~D~r~~y~ 193 (218)
+++++|.| .+++
T Consensus 147 ~gi~vi~D--~a~a 158 (379)
T PRK11658 147 YGIPVIED--AAHA 158 (379)
T ss_pred cCCeEEEE--CCCc
Confidence 99999999 6665
No 126
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.47 E-value=5.6e-13 Score=114.88 Aligned_cols=148 Identities=7% Similarity=-0.058 Sum_probs=109.3
Q ss_pred ccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCC
Q psy6266 24 PWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNY 103 (218)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~g 103 (218)
..+++.+++|..+.... ...|.+..+..+|++.+++++.. +. .++|.||++++.++++++ +.+|
T Consensus 8 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~~a~~~g~---------~~--~~~~~~gt~a~~~~~~~l--~~~g 71 (338)
T cd06502 8 TGPTPEMLEAMAAANVG---DDVYGEDPTTAKLEARAAELFGK---------EA--ALFVPSGTAANQLALAAH--TQPG 71 (338)
T ss_pred CCCCHHHHHHHHhcccC---CcccCCCHHHHHHHHHHHHHhCC---------Ce--EEEecCchHHHHHHHHHh--cCCC
Confidence 34688899887765422 23687888889999998887521 22 347788889999888876 6799
Q ss_pred CeEEecCCCchhHHH---HHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCC----CCcEEEEcccCCCCcHH-----
Q psy6266 104 TTFYYSKPTWENHRL---VFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAP----DNSVIILHACAHNPTAQ----- 171 (218)
Q Consensus 104 d~V~i~~P~y~~y~~---~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~----~~~~iil~~~p~NPTG~----- 171 (218)
|+|++++|+|+.+.. .....|+ +++.++. . .+.+|++.+++.+.+.. +++.+++.++||||+|.
T Consensus 72 d~v~~~~~~~~~~~~~~~~~~~~g~-~~~~v~~--~-~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~ 147 (338)
T cd06502 72 GSVICHETAHIYTDEAGAPEFLSGV-KLLPVPG--E-NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDE 147 (338)
T ss_pred CeEEEecCcceeeecCCcHHHHcCc-eEEeecC--C-CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHH
Confidence 999999999876432 3455788 8888875 2 25689999999886421 24556666789998653
Q ss_pred --HHHHHhhcCeEEEeeCCceeec
Q psy6266 172 --QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 172 --~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+|.++|++++++++.| ++|.
T Consensus 148 l~~i~~~~~~~~~~livD--ea~~ 169 (338)
T cd06502 148 LKAISALAKENGLPLHLD--GARL 169 (338)
T ss_pred HHHHHHHHHHcCCeEeec--hHHH
Confidence 5888999999999999 7763
No 127
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.47 E-value=1e-12 Score=114.97 Aligned_cols=157 Identities=11% Similarity=0.009 Sum_probs=111.3
Q ss_pred CCCCCccCchHHHHHHHHHhhcCCCC-ccC----c--CCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHH
Q psy6266 19 TEECKPWVLPVVRQAEKELAADDSLN-HEY----L--PVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALR 91 (218)
Q Consensus 19 ~~~~~~~~~~~v~~a~~~~~~~~~~~-~~Y----~--~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~ 91 (218)
|-.+..++++.+.+|..+...+.... ++. . -..+..++|+.+++++.. . +++++ +.|.|+++++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~-----~~~~v--~~~~g~t~a~~ 75 (373)
T cd06453 4 DNAATSQKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINA-P-----SPDEI--IFTRNTTEAIN 75 (373)
T ss_pred cCccccCCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCC-C-----CCCeE--EEeCCHHHHHH
Confidence 33444577888998887766431111 111 1 023456788888877632 1 13444 58999999999
Q ss_pred HHHHHHHHhc---CCCeEEecCCCchhHH----HHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 92 VGAEFLHRIL---NYTTFYYSKPTWENHR----LVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 92 ~~~~~l~~l~---~gd~V~i~~P~y~~y~----~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
+++.++ .. +||+|++++|.|++.. ...+..|+ +++.++.. +...+|.+.+++.+.+ ++.+++...
T Consensus 76 ~~~~~l--~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~-~~~~v~~~--~~~~~d~~~l~~~l~~---~~~~v~~~~ 147 (373)
T cd06453 76 LVAYGL--GRANKPGDEIVTSVMEHHSNIVPWQQLAERTGA-KLKVVPVD--DDGQLDLEALEKLLTE---RTKLVAVTH 147 (373)
T ss_pred HHHHHh--hhcCCCCCEEEECcchhHHHHHHHHHHHhhcCc-EEEEeecC--CCCCcCHHHHHHHhcC---CceEEEEeC
Confidence 988877 34 8999999999999842 23446788 88888873 3456899999988853 344555678
Q ss_pred CCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 165 AHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 165 p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
++||||. +|.++|++++++++.| .++.
T Consensus 148 ~~~~tG~~~~~~~i~~~~~~~~~~li~D--~a~~ 179 (373)
T cd06453 148 VSNVLGTINPVKEIGEIAHEAGVPVLVD--GAQS 179 (373)
T ss_pred cccccCCcCCHHHHHHHHHHcCCEEEEE--hhhh
Confidence 9999998 7999999999999999 6654
No 128
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.46 E-value=1.8e-12 Score=115.06 Aligned_cols=162 Identities=12% Similarity=0.075 Sum_probs=112.7
Q ss_pred EEeCCCCCccCchHHHHHHHHHhhcCCCC-c--cCc----CCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChh
Q psy6266 16 AYRTEECKPWVLPVVRQAEKELAADDSLN-H--EYL----PVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTG 88 (218)
Q Consensus 16 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~--~Y~----~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~ 88 (218)
+|-|..+..+.++.|.++..+..++.... + .|. -..-++++|+++++++.. .++++| +.|.|+++
T Consensus 25 iYld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~------~~~~~v--~~t~g~t~ 96 (406)
T PRK09295 25 AYLDSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINA------RSAEEL--VFVRGTTE 96 (406)
T ss_pred EEEeCcccccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCc------CCCCeE--EEeCCHHH
Confidence 34444444567889999887766431111 0 110 012267888999887632 134554 58999999
Q ss_pred HHHHHHHHHH--HhcCCCeEEecCCCchh----HHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEc
Q psy6266 89 ALRVGAEFLH--RILNYTTFYYSKPTWEN----HRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILH 162 (218)
Q Consensus 89 al~~~~~~l~--~l~~gd~V~i~~P~y~~----y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~ 162 (218)
++.++++++. .+.+||+|+++++.|++ +..+.+..|+ +++.++.. . .+.+|++.+++.+. +++.++..
T Consensus 97 ~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~-~v~~v~~~-~-~~~~d~~~l~~~i~---~~t~lv~l 170 (406)
T PRK09295 97 GINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGA-ELRVIPLN-P-DGTLQLETLPALFD---ERTRLLAI 170 (406)
T ss_pred HHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCc-EEEEEecC-C-CCCCCHHHHHHhcC---CCcEEEEE
Confidence 9998887642 25789999999987764 4445566788 88888763 2 35578999988874 34556666
Q ss_pred ccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 163 ACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 163 ~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+.++||||. +|.++|++++++++.| +++.
T Consensus 171 ~~~~n~tG~~~~~~~i~~~~~~~~~~vivD--~a~~ 204 (406)
T PRK09295 171 THVSNVLGTENPLAEMIALAHQHGAKVLVD--GAQA 204 (406)
T ss_pred ecchhcccccCCHHHHHHHHHHcCCEEEEE--cccc
Confidence 789999998 7899999999999999 6664
No 129
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.46 E-value=9.8e-13 Score=113.75 Aligned_cols=162 Identities=9% Similarity=0.042 Sum_probs=117.9
Q ss_pred cCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHH-h-c-
Q psy6266 25 WVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHR-I-L- 101 (218)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~-l-~- 101 (218)
.++..+.+.+....+. ....|..+.|..++++++++++.+ ..+....++. ++.|.|+++|+.++++++.. . .
T Consensus 10 ~~~~~~~~~~~~~~n~--~~~~y~~~~~~~~le~~~~~~~~~-~~g~~~~~~~--~~~t~ggt~a~~~al~~~~~~~~~~ 84 (345)
T cd06450 10 DPPALLLEMLTSAKNA--IDFTWDESPAATEMEAEVVNWLAK-LFGLPSEDAD--GVFTSGGSESNLLALLAARDRARKR 84 (345)
T ss_pred cHHHHHHHHHHHhcCC--CCcccccCchhHHHHHHHHHHHHH-HhCCCCCCCC--EEEeCChhHHHHHHHHHHHHHhhhh
Confidence 3345555666665543 334599999999999999888743 2221112233 35899999999998887632 1 1
Q ss_pred -------C--CCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC---CCCcEEEEcccCCCCc
Q psy6266 102 -------N--YTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA---PDNSVIILHACAHNPT 169 (218)
Q Consensus 102 -------~--gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~---~~~~~iil~~~p~NPT 169 (218)
+ +++|++++|+|+++...++..|+ +++.++.. + ...+|++.+++.+.+. ..++.+++.+.++|||
T Consensus 85 ~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~-~~~~v~~~-~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~t 161 (345)
T cd06450 85 LKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDV-KVRLVPVD-E-DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDT 161 (345)
T ss_pred hhcccccccCCeEEEEcCcchhHHHHHHHHHhc-CeEEeeeC-C-CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCC
Confidence 2 34889999999999888888898 89999873 3 3478999999988641 1144556667899999
Q ss_pred HH-----HHHHHhhcCeEEEeeCCceeeccCC
Q psy6266 170 AQ-----QVAHMVDKHHVYLLRSGRINMCGLT 196 (218)
Q Consensus 170 G~-----~l~~l~~~~~i~ii~D~r~~y~~l~ 196 (218)
|. +|.++|++++++++.| .+|....
T Consensus 162 G~~~~~~~i~~~~~~~~~~l~vD--~a~~~~~ 191 (345)
T cd06450 162 GAIDPLEEIADLAEKYDLWLHVD--AAYGGFL 191 (345)
T ss_pred CCCCCHHHHHHHHHHhCCeEEEe--chhhHHH
Confidence 98 8999999999999999 7877654
No 130
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.45 E-value=1.8e-12 Score=114.42 Aligned_cols=160 Identities=10% Similarity=0.019 Sum_probs=112.7
Q ss_pred EeCCCCCccCchHHHHHHHHHhhcCCC--CccCcCCCC----cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHH
Q psy6266 17 YRTEECKPWVLPVVRQAEKELAADDSL--NHEYLPVLG----LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGAL 90 (218)
Q Consensus 17 ~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~~Y~~~~G----~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al 90 (218)
|-|-.+..++++.+++|..+...+... ...|....| ..++|+++++++.. .+++| +.+.|+++++
T Consensus 20 yl~~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~-------~~~~v--~~~~~~t~~l 90 (397)
T TIGR01976 20 FFDNPAGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNA-------DPPEV--VFGANATSLT 90 (397)
T ss_pred EecCCccCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCC-------CCCeE--EEeCCHHHHH
Confidence 444445456788999988776643111 123655545 46888888877632 22333 5788999998
Q ss_pred HHHHHHHHH-hcCCCeEEecCCCchhHH----HHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 91 RVGAEFLHR-ILNYTTFYYSKPTWENHR----LVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 91 ~~~~~~l~~-l~~gd~V~i~~P~y~~y~----~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
.+++.++.. ++|||+|++++|.|++.. ...+..|+ +++.++.. .+.+.++.+.+++.+. +++.+++.++|
T Consensus 91 ~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~-~~~~~~~~-~~~~~~~~~~l~~~i~---~~~~lv~i~~~ 165 (397)
T TIGR01976 91 FLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGA-KVKWARVD-EATGELHPDDLASLLS---PRTRLVAVTAA 165 (397)
T ss_pred HHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCC-EEEEEecc-ccCCCcCHHHHHHhcC---CCceEEEEeCC
Confidence 877665532 578999999999987643 34566798 88888763 3235678888888874 34556666789
Q ss_pred CCCcHH-----HHHHHhhcCeEEEeeCCceee
Q psy6266 166 HNPTAQ-----QVAHMVDKHHVYLLRSGRINM 192 (218)
Q Consensus 166 ~NPTG~-----~l~~l~~~~~i~ii~D~r~~y 192 (218)
+||||. +|.++|++|+++++.| ++.
T Consensus 166 ~n~tG~~~~~~~i~~~~~~~~~~~ivD--~a~ 195 (397)
T TIGR01976 166 SNTLGSIVDLAAITELVHAAGALVVVD--AVH 195 (397)
T ss_pred CCCCCccCCHHHHHHHHHHcCCEEEEe--hhh
Confidence 999998 7999999999999999 554
No 131
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.44 E-value=2.7e-12 Score=113.55 Aligned_cols=167 Identities=12% Similarity=0.065 Sum_probs=117.7
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCC-cc--Cc----CCCCcHHHHHHHHHHhcCCCCCCCcCCCc
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLN-HE--YL----PVLGLESFSSAATRMLLGGDASPPLREGR 77 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~~--Y~----~~~G~~~lr~aia~~~~~~~~~~~~~~~~ 77 (218)
.|..++.|--|. .| ++|+.|.+|..+..++.... +. |. ...+++++|+++++++.. . .+++
T Consensus 15 ~~~~~~yld~~~----~~--~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~-~-----~~~~ 82 (403)
T TIGR01979 15 NGKPLVYLDSAA----TS--QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINA-A-----SDEE 82 (403)
T ss_pred CCCceEEEeCcc----cc--CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCc-C-----CCCe
Confidence 366777777774 23 56888888887765431111 10 11 123577999999987632 1 1344
Q ss_pred eEEEEeccChhHHHHHHHHHH--HhcCCCeEEecCCCchhH----HHHHHHhCCCcceeEeccCCcCccccHHHHHHHHh
Q psy6266 78 AFGVQTLSGTGALRVGAEFLH--RILNYTTFYYSKPTWENH----RLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLV 151 (218)
Q Consensus 78 v~~~~t~G~~~al~~~~~~l~--~l~~gd~V~i~~P~y~~y----~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~ 151 (218)
| +.|.|+++++.+++.++. .+.+||+|++++|.|++. ....+..|+ +++.++.. +.+.++.+.+++.+.
T Consensus 83 v--~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~-~~~~v~~~--~~~~~~~~~l~~~i~ 157 (403)
T TIGR01979 83 I--VFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGA-TLKFIPLD--DDGTLDLDDLEKLLT 157 (403)
T ss_pred E--EEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCc-EEEEEecC--CCCCCCHHHHHHHhc
Confidence 4 588999999998887652 146899999999987763 345566788 88888763 345678899988885
Q ss_pred cCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 152 NAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 152 ~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+++.+++.++++||||. +|.++|++++++++.| .++.
T Consensus 158 ---~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD--~a~~ 199 (403)
T TIGR01979 158 ---EKTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVD--GAQA 199 (403)
T ss_pred ---cCCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEE--chhh
Confidence 34556666789999998 7899999999999999 6664
No 132
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.44 E-value=1.7e-12 Score=114.96 Aligned_cols=124 Identities=15% Similarity=0.141 Sum_probs=92.6
Q ss_pred ccCcCC--CCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHH--
Q psy6266 45 HEYLPV--LGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVF-- 120 (218)
Q Consensus 45 ~~Y~~~--~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~-- 120 (218)
+.|+.. .+...|+++++++..+ +. +++|.|+++|+..++.++ ++|||+|++++|.|++....+
T Consensus 53 ~~Y~r~~npt~~~Le~~iA~le~~---------~~--~~~~~sG~~Ai~~~l~al--l~~GD~Vvv~~~~Y~~t~~l~~~ 119 (394)
T PRK09028 53 MFYGRRGTPTHFAFQAAIVELEGG---------AG--TALYPSGAAAISNALLSF--LKAGDHLLMVDSCYEPTRDLCDK 119 (394)
T ss_pred ceecCCCCchHHHHHHHHHHHhCC---------Cc--EEEECCHHHHHHHHHHHH--hCCCCEEEEECCCcHHHHHHHHH
Confidence 558874 4557999999988633 12 358999999999988876 789999999999998876544
Q ss_pred --HHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 121 --LNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 121 --~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+..|. ++..+ +.. +.+.+++.+. +++++++.++|+||||. +|.++|++++++++.| ++|.
T Consensus 120 ~l~~~Gi-~v~~v---~~~----~~e~l~~~l~---~~TklV~lespsNPtg~v~dl~~I~~la~~~g~~lvvD--~t~a 186 (394)
T PRK09028 120 ILKGFGI-ETTYY---DPM----IGEGIRELIR---PNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLD--NTWA 186 (394)
T ss_pred hhhhcce-EEEEE---CCC----CHHHHHHhcC---cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE--CCcc
Confidence 33455 44443 211 3455666663 45667777899999997 7889999999999999 8886
Q ss_pred c
Q psy6266 194 G 194 (218)
Q Consensus 194 ~ 194 (218)
.
T Consensus 187 ~ 187 (394)
T PRK09028 187 S 187 (394)
T ss_pred c
Confidence 3
No 133
>PLN02242 methionine gamma-lyase
Probab=99.44 E-value=9.2e-13 Score=117.66 Aligned_cols=128 Identities=11% Similarity=0.080 Sum_probs=96.9
Q ss_pred cCc--CCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHH--
Q psy6266 46 EYL--PVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFL-- 121 (218)
Q Consensus 46 ~Y~--~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~-- 121 (218)
-|+ +..-..+|.+.++++..+ +. +++|+||++|+.++++++ +.+||+|++++|.|+.+...+.
T Consensus 69 ~Y~r~~~Pt~~~LE~~lA~l~g~---------~~--~l~~~sG~~Ai~~al~al--~~~GD~Vl~~~~~Y~~~~~~~~~~ 135 (418)
T PLN02242 69 IYSRHFNPTVLNLGRQMAALEGT---------EA--AYCTASGMSAISSVLLQL--CSSGGHVVASNTLYGGTHALLAHF 135 (418)
T ss_pred cccCCCChhHHHHHHHHHHHhCC---------Ce--EEEEccHHHHHHHHHHHH--hCCCCEEEEcCCcHHHHHHHHHHh
Confidence 465 345578888888877633 22 358999999999988877 6799999999999999977653
Q ss_pred ---HhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 122 ---NAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 122 ---~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
..|+ +++.++. .|++.+++.+.. .++.+++.++|+||||. +|.++|+++++++|.| ++|.
T Consensus 136 ~~~~~G~-~~~~~d~-------~d~e~l~~~i~~--~~tklV~lesp~NPtG~v~dl~~I~~la~~~gi~livD--ea~~ 203 (418)
T PLN02242 136 LPRKCNI-TTTFVDI-------TDLEAVKKAVVP--GKTKVLYFESISNPTLTVADIPELARIAHEKGVTVVVD--NTFA 203 (418)
T ss_pred hhhccCc-eEEEcCC-------CCHHHHHHhcCc--CCCEEEEEecCCCCCCcccCHHHHHHHHHHhCCEEEEE--CCCC
Confidence 3565 5544422 277888877742 13556666799999998 8999999999999999 8998
Q ss_pred cCCCC
Q psy6266 194 GLTTQ 198 (218)
Q Consensus 194 ~l~~~ 198 (218)
.+.++
T Consensus 204 ~~~~~ 208 (418)
T PLN02242 204 PMVLS 208 (418)
T ss_pred ccCCC
Confidence 77654
No 134
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.43 E-value=3.4e-12 Score=114.67 Aligned_cols=124 Identities=13% Similarity=0.086 Sum_probs=97.2
Q ss_pred cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHH-------HhcCCCeEEecCCCchhHHHHHHHhCC
Q psy6266 53 LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLH-------RILNYTTFYYSKPTWENHRLVFLNAGF 125 (218)
Q Consensus 53 ~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~-------~l~~gd~V~i~~P~y~~y~~~~~~~g~ 125 (218)
..+|++++++++.. +. ++.|.++++|+.+++.++. .+.|||+|++++|+|+.+...+...|+
T Consensus 65 ~~~fe~~lA~~~g~---------~~--~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~ 133 (438)
T PRK15407 65 NDAFEKKLAEFLGV---------RY--ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGL 133 (438)
T ss_pred HHHHHHHHHHHhCC---------Ce--EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCC
Confidence 48899999988743 12 3578888999988877652 257899999999999999999999999
Q ss_pred CcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-HHHHHhhcCeEEEeeCCceeec
Q psy6266 126 TEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 126 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+++.++.. .+.+.+|++.+++.+.. ....+++.+.++||+.. +|.++|++|+++||+| .+++
T Consensus 134 -~pv~vdvd-~~~~~id~~~le~~i~~--~tkaVi~~~~~G~p~dl~~I~~la~~~gi~vIeD--aa~a 196 (438)
T PRK15407 134 -VPVFVDVE-LPTYNIDASLLEAAVSP--KTKAIMIAHTLGNPFDLAAVKAFCDKHNLWLIED--NCDA 196 (438)
T ss_pred -EEEEEecC-CCcCCcCHHHHHHHcCc--CCeEEEEeCCCCChhhHHHHHHHHHHCCCEEEEE--Cccc
Confidence 89998773 34567899999888753 22345555667888776 8999999999999999 5543
No 135
>PLN02822 serine palmitoyltransferase
Probab=99.43 E-value=2e-12 Score=117.38 Aligned_cols=170 Identities=6% Similarity=-0.082 Sum_probs=118.4
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCC-----CccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceE
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSL-----NHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAF 79 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~-----~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~ 79 (218)
.|..+|||+.|.|.+ +..++.|++|..+.+++.+. ...|.+..+..+|++++++++-. ++.|
T Consensus 107 ~G~~~id~~s~~~lg----l~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~--------~~~i- 173 (481)
T PLN02822 107 NGKDVVNFASANYLG----LIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT--------PDSI- 173 (481)
T ss_pred CCceEEEeECCCcCC----CCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC--------CCEE-
Confidence 588999999997632 34588888887777754110 11466777799999999998743 2333
Q ss_pred EEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC---CCC
Q psy6266 80 GVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA---PDN 156 (218)
Q Consensus 80 ~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~---~~~ 156 (218)
+.+.|.+ ++..++.++ .++||.|++...++.++...+.+.|. +++.++..+. -+++...+.++.. .++
T Consensus 174 -~~s~G~~-a~~sai~a~--~~~gd~Ii~d~~~H~s~~~~~~ls~~-~~~~~~~nd~----~~l~~~l~~~~~~~~~~~~ 244 (481)
T PLN02822 174 -LYSYGLS-TIFSVIPAF--CKKGDIIVADEGVHWGIQNGLYLSRS-TIVYFKHNDM----ESLRNTLEKLTAENKRKKK 244 (481)
T ss_pred -EECCHHH-HHHHHHHHh--CCCCCEEEEeCCccHHHHHHHHHcCC-eEEEECCCCH----HHHHHHHHHHhhhhcccCC
Confidence 4666766 455566655 57999999988888888778888888 8888765211 1333333333321 122
Q ss_pred -cEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 157 -SVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 157 -~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
+.+++..+++|+||. +|.++|++|++++|.| |+|+...++
T Consensus 245 ~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvD--Ea~s~gvlG 290 (481)
T PLN02822 245 LRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLD--ESNSFGVLG 290 (481)
T ss_pred CcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEE--CCccccccC
Confidence 245666789999997 8999999999999999 999844433
No 136
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.43 E-value=2.2e-12 Score=111.58 Aligned_cols=144 Identities=15% Similarity=0.064 Sum_probs=99.4
Q ss_pred chHHHHHHHHHhhcCCC-CccCcCCCC----cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhc
Q psy6266 27 LPVVRQAEKELAADDSL-NHEYLPVLG----LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRIL 101 (218)
Q Consensus 27 ~~~v~~a~~~~~~~~~~-~~~Y~~~~G----~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~ 101 (218)
++.|.+|+++.++.... ...|....| ..+|++++++++ + . +.. +++.++++++.++++++ ++
T Consensus 17 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-~-~-------~~~--iv~~sg~~a~~~~~~~~--~~ 83 (349)
T cd06454 17 HPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFH-G-K-------EAA--LVFSSGYAANDGVLSTL--AG 83 (349)
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHh-C-C-------CCE--EEeccHHHHHHHHHHHh--cC
Confidence 47788888877753111 122333334 356666666654 2 1 122 35555677777766655 57
Q ss_pred CCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC--CCCcEEEEcccCCCCcHH-----HHH
Q psy6266 102 NYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA--PDNSVIILHACAHNPTAQ-----QVA 174 (218)
Q Consensus 102 ~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~iil~~~p~NPTG~-----~l~ 174 (218)
|||+|++++|+|+++...++..|+ +++.++. .|.+.+++.+++. ++++.+++.++++||||. +|.
T Consensus 84 ~gd~Vl~~~~~~~~~~~~~~~~g~-~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~ 155 (349)
T cd06454 84 KGDLIISDSLNHASIIDGIRLSGA-KKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELV 155 (349)
T ss_pred CCCEEEEehhhhHHHHHHHHHcCC-ceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHH
Confidence 999999999999999888888898 7776642 3556666666542 134566666789999998 789
Q ss_pred HHhhcCeEEEeeCCceeec
Q psy6266 175 HMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 175 ~l~~~~~i~ii~D~r~~y~ 193 (218)
++|+++++++|.| ++|.
T Consensus 156 ~~~~~~~~~livD--~a~~ 172 (349)
T cd06454 156 DLAKKYGAILFVD--EAHS 172 (349)
T ss_pred HHHHHcCCEEEEE--cccc
Confidence 9999999999999 7775
No 137
>PRK10534 L-threonine aldolase; Provisional
Probab=99.43 E-value=1e-12 Score=113.45 Aligned_cols=147 Identities=8% Similarity=-0.018 Sum_probs=102.3
Q ss_pred ccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCC
Q psy6266 24 PWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNY 103 (218)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~g 103 (218)
+.+++.+++|..+... ....|.|..+..+|++++++++ + . +.+ +++.|++++..+.+.++ +.||
T Consensus 10 ~~p~~~~~~a~~~~~~---~~~~Y~~~~~~~~L~~~la~~~-g------~--~~~--~v~~~g~~a~~~~l~~~--~~~g 73 (333)
T PRK10534 10 TRPSRAMLEAMMAAPV---GDDVYGDDPTVNALQDYAAELS-G------K--EAA--LFLPTGTQANLVALLSH--CERG 73 (333)
T ss_pred CCCCHHHHHHHHhccC---CCcccCCCHHHHHHHHHHHHHh-C------C--CeE--EEeCchHHHHHHHHHHh--cCCC
Confidence 3478899988766442 3567999999999999999885 3 1 122 47888888877777655 6799
Q ss_pred CeEEecCCCchh-HHHH-HHHhC-CCcceeEeccCCcCccccHHHHHHHHhcCC---CCcEEEEcccCCCCcHH------
Q psy6266 104 TTFYYSKPTWEN-HRLV-FLNAG-FTEAREYRYWNPEKRAVDFTGMYEDLVNAP---DNSVIILHACAHNPTAQ------ 171 (218)
Q Consensus 104 d~V~i~~P~y~~-y~~~-~~~~g-~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~---~~~~iil~~~p~NPTG~------ 171 (218)
|+|+++.|+|.. |... ....+ + +++.++. .+.+.+|++.+++++.... .++.+++.+ |||||.
T Consensus 74 d~vi~~~~~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~--np~~G~v~~~~~ 148 (333)
T PRK10534 74 EEYIVGQAAHNYLYEAGGAAVLGSI-QPQPIDA--AADGTLPLDKVAAKIKPDDIHFARTRLLSLE--NTHNGKVLPREY 148 (333)
T ss_pred CeeEEechhhhhHhcCCchHHhcCc-eEEeecC--CCCCCCCHHHHHHhhcccCcCcccceEEEEe--cCCCCeecCHHH
Confidence 999999998863 5321 23333 5 6666655 2356789999988874310 134444444 455687
Q ss_pred --HHHHHhhcCeEEEeeCCceeec
Q psy6266 172 --QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 172 --~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
++.++|++|+++++.| |+|.
T Consensus 149 l~~i~~~~~~~~~~lvvD--EA~~ 170 (333)
T PRK10534 149 LKQAWEFTRERNLALHVD--GARI 170 (333)
T ss_pred HHHHHHHHHHcCCeEEee--HHHH
Confidence 5677889999999999 7765
No 138
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.42 E-value=3.1e-12 Score=114.19 Aligned_cols=166 Identities=14% Similarity=0.068 Sum_probs=115.6
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCC-cc---CcC---CCCcHHHHHHHHHHhcCCCCCCCcCCCce
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLN-HE---YLP---VLGLESFSSAATRMLLGGDASPPLREGRA 78 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~~---Y~~---~~G~~~lr~aia~~~~~~~~~~~~~~~~v 78 (218)
|..+|.|.-+. ..++++.|.+|..+...+.... ++ |.. ...++++|+++++++.. . ++++|
T Consensus 30 ~~~~iyLd~a~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-~-----~~~~v 97 (424)
T PLN02855 30 GSKLVYLDNAA------TSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINA-S-----TSREI 97 (424)
T ss_pred CCCeEEeeCcc------ccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCC-C-----CCCEE
Confidence 44566666664 2357888999887765431111 11 211 12357899999987632 1 23454
Q ss_pred EEEEeccChhHHHHHHHHHH--HhcCCCeEEecCCCchh----HHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhc
Q psy6266 79 FGVQTLSGTGALRVGAEFLH--RILNYTTFYYSKPTWEN----HRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVN 152 (218)
Q Consensus 79 ~~~~t~G~~~al~~~~~~l~--~l~~gd~V~i~~P~y~~----y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~ 152 (218)
+.|.|+++++.++++.+. .+.+||+|++++|.|++ +..+.+..|+ +++.++.. . ...+|++.+++.+.
T Consensus 98 --~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~-~v~~v~~~-~-~~~~~~~~l~~~i~- 171 (424)
T PLN02855 98 --VFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGA-VLKFVGLT-P-DEVLDVEQLKELLS- 171 (424)
T ss_pred --EEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCC-EEEEEecC-C-CCCcCHHHHHHHhc-
Confidence 588999999998877531 25789999999997764 4445566788 88888763 2 24578999988885
Q ss_pred CCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 153 APDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 153 ~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+++.+++.+.++||||. +|.++|++++++++.| .++.
T Consensus 172 --~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD--~a~~ 213 (424)
T PLN02855 172 --EKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVD--ACQS 213 (424)
T ss_pred --cCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEE--hhhh
Confidence 34556666789999998 7899999999999999 6664
No 139
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.42 E-value=1.2e-12 Score=115.83 Aligned_cols=167 Identities=16% Similarity=0.105 Sum_probs=114.4
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhc-C----CCCccCcCCCCcHHHHHHHHHHh---cCCCCCCCcCCCceE
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKELAAD-D----SLNHEYLPVLGLESFSSAATRML---LGGDASPPLREGRAF 79 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~-~----~~~~~Y~~~~G~~~lr~aia~~~---~~~~~~~~~~~~~v~ 79 (218)
..|||.-|. -.+++.|++|+...... . .+...|....+.+++++++.+++ ++ . +...
T Consensus 20 ~~~~~~~~~-------~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g-~-----~~~~-- 84 (402)
T cd00378 20 ETLELIASE-------NFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFG-A-----EYAN-- 84 (402)
T ss_pred hCeeeeccC-------CcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhC-C-----Ccee--
Confidence 356776662 24688999987653311 0 12344777888889988765443 44 2 2222
Q ss_pred EEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHH-----HHHhCCCcceeEeccCC-cCccccHHHHHHHHhcC
Q psy6266 80 GVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLV-----FLNAGFTEAREYRYWNP-EKRAVDFTGMYEDLVNA 153 (218)
Q Consensus 80 ~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~-----~~~~g~~~~~~~~~~~~-~~~~~d~~~~~~~l~~~ 153 (218)
+.+.+|++|+.++++++ ++|||+|++++|.|+.|... ++..|+ ++..+++... +.+.+|++.+++.+.+
T Consensus 85 -v~~~sgt~a~~~~l~~l--~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~id~~~l~~~i~~- 159 (402)
T cd00378 85 -VQPHSGSQANLAVYFAL--LEPGDTIMGLDLSHGGHLTHGSFTKVSASGK-LFESVPYGVDPETGLIDYDALEKMALE- 159 (402)
T ss_pred -eecCCcHHHHHHHHHHh--cCCCCEEEEecCccCccccccccccccccce-eEEEecCCcCcccCCcCHHHHHHHHHh-
Confidence 23346789999888877 68999999999999987543 566777 6666665322 2578899999998854
Q ss_pred CCCcEEEEcccCCCCcHH---HHHHHhhcCeEEEeeCCcee-eccCCC
Q psy6266 154 PDNSVIILHACAHNPTAQ---QVAHMVDKHHVYLLRSGRIN-MCGLTT 197 (218)
Q Consensus 154 ~~~~~iil~~~p~NPTG~---~l~~l~~~~~i~ii~D~r~~-y~~l~~ 197 (218)
+++.+++.++++||+.. +|.++|++++++++.| ++ |.++.+
T Consensus 160 -~~~~~v~~~~~~~~~~~~~~~I~~l~~~~~~~li~D--~a~~~g~~~ 204 (402)
T cd00378 160 -FKPKLIVAGASAYPRPIDFKRFREIADEVGAYLLVD--MAHVAGLVA 204 (402)
T ss_pred -CCCCEEEecCcccCCCcCHHHHHHHHHhcCCEEEEE--ccchhhhhh
Confidence 23344455567898875 8999999999999999 77 455543
No 140
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.42 E-value=3.6e-12 Score=112.27 Aligned_cols=147 Identities=15% Similarity=0.068 Sum_probs=107.8
Q ss_pred ccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCC
Q psy6266 24 PWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNY 103 (218)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~g 103 (218)
|...+.-+++..+++.. . .|....+..+||+++++++.. + .. +.+.++++|+.+++.++. +.||
T Consensus 6 ~~~~~~~~~~v~~~~~~--~--~~~~g~~~~~le~~la~~~g~-~--------~~--v~~~sgt~al~~~l~al~-~~~G 69 (380)
T TIGR03588 6 QSIDQDDIDAVVEVLKS--D--FLTQGPTVPAFEEALAEYVGA-K--------YA--VAFNSATSALHIACLALG-VGPG 69 (380)
T ss_pred CCCCHHHHHHHHHHHhc--C--CccCChhHHHHHHHHHHHHCC-C--------eE--EEEcCHHHHHHHHHHHcC-CCCC
Confidence 33445556666665533 2 255566789999999988743 2 12 356688999999887652 4689
Q ss_pred CeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC-CCCcEEEEcccCCCCcHH-----HHHHHh
Q psy6266 104 TTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA-PDNSVIILHACAHNPTAQ-----QVAHMV 177 (218)
Q Consensus 104 d~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~iil~~~p~NPTG~-----~l~~l~ 177 (218)
|+|++++|+|+.+...++..|+ +++.++.. .+.+.+|++.+++.+.+. .+++.+++ +.||+|. +|.++|
T Consensus 70 d~Viv~~~~~~~~~~~~~~~G~-~~~~~~~~-~~~~~~d~~~l~~~i~~~~~~~t~~v~---~~~~~G~~~~~~~i~~l~ 144 (380)
T TIGR03588 70 DRVWTTPITFVATANCALYCGA-KVDFVDID-PDTGNIDEDALEKKLAAAKGKLPKAIV---PVDFAGKSVDMQAIAALA 144 (380)
T ss_pred CEEEeCCcchHHHHHHHHHcCC-EEEEEecC-CCcCCcCHHHHHHHhhcccCCCceEEE---EeCCCCccCCHHHHHHHH
Confidence 9999999999999999999999 99999873 345678999999988632 12344444 3567885 899999
Q ss_pred hcCeEEEeeCCceeec
Q psy6266 178 DKHHVYLLRSGRINMC 193 (218)
Q Consensus 178 ~~~~i~ii~D~r~~y~ 193 (218)
++|+++||+| .+.+
T Consensus 145 ~~~~~~lI~D--~a~a 158 (380)
T TIGR03588 145 KKHGLKIIED--ASHA 158 (380)
T ss_pred HHcCCEEEEE--CCCc
Confidence 9999999999 5543
No 141
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.42 E-value=4.9e-12 Score=110.56 Aligned_cols=125 Identities=14% Similarity=0.063 Sum_probs=96.3
Q ss_pred cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEe
Q psy6266 53 LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYR 132 (218)
Q Consensus 53 ~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~ 132 (218)
..+|++++++++ + . +++ +.|.|+++++.++++++ +.|||+|++++|+|.+....++..|+ +++.++
T Consensus 46 ~~~l~~~la~~~-g------~--~~i--~~~~g~t~al~~~l~~~--~~~gd~Vl~~~~~~~~~~~~~~~~g~-~~~~v~ 111 (361)
T cd06452 46 IKDFHHDLAEFL-G------M--DEA--RVTPGAREGKFAVMHSL--CEKGDWVVVDGLAHYTSYVAAERAGL-NVREVP 111 (361)
T ss_pred HHHHHHHHHHHc-C------C--ceE--EEeCCHHHHHHHHHHHh--cCCCCEEEEcCCcchHHHHHHHhcCC-EEEEEe
Confidence 458888888764 3 2 344 58999999999988876 67999999999986665567788899 899988
Q ss_pred ccCCcCccccHHHHHHHHhcCC----CCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 133 YWNPEKRAVDFTGMYEDLVNAP----DNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 133 ~~~~~~~~~d~~~~~~~l~~~~----~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
......+.+|++.+++.+++.. +++.+++.++|+||||. +|.+++++++++++.| ++|.
T Consensus 112 ~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD--~a~~ 179 (361)
T cd06452 112 NTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLN--GAYT 179 (361)
T ss_pred cCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEE--CCcc
Confidence 7322234789999988886321 23445555789999998 7899999999999999 8886
No 142
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.40 E-value=3.6e-12 Score=112.16 Aligned_cols=161 Identities=10% Similarity=0.072 Sum_probs=114.0
Q ss_pred CCCCCccCchHHHHHHHHHhhc----CCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHH
Q psy6266 19 TEECKPWVLPVVRQAEKELAAD----DSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGA 94 (218)
Q Consensus 19 ~~~~~~~~~~~v~~a~~~~~~~----~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~ 94 (218)
|..+..++++.|.++..+..++ +...+.|. ..+.+.|+++++++... .+. .++++| +.|.|+++++.+++
T Consensus 4 d~aa~~~~~~~v~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~a~~~~~~~-~~~--~~~~~i--~~t~g~teal~~~~ 77 (382)
T TIGR03403 4 DNNATTMLDPKVKELMDPFFCDIYGNPNSLHQFG-TATHPAIAEALDKLYKG-INA--RDLDDI--IITSCATESNNWVL 77 (382)
T ss_pred cCcCCCCCCHHHHHHHHHHHHhcCcCCccccHHH-HHHHHHHHHHHHHHHHH-cCc--CCCCeE--EEeCCHHHHHHHHH
Confidence 4445557788999998776643 11222333 35678999999888743 321 134554 58999999999988
Q ss_pred HHHHH---hcC-CCeEEecCCCchhHHHH---HHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCC
Q psy6266 95 EFLHR---ILN-YTTFYYSKPTWENHRLV---FLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHN 167 (218)
Q Consensus 95 ~~l~~---l~~-gd~V~i~~P~y~~y~~~---~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~N 167 (218)
+++.. +.+ +|+|+++++.||++... ++..|+ +++.++.. . .+.+|++.+++.+.. ++.+++.++|||
T Consensus 78 ~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~-~v~~v~~~-~-~g~~d~~~l~~~i~~---~t~lv~~~~~~n 151 (382)
T TIGR03403 78 KGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGV-EVTYLPIN-E-QGTITAEQVREAITE---KTALVSVMWANN 151 (382)
T ss_pred HHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCC-EEEEEecC-C-CCCCCHHHHHHhccc---CCeEEEEEcccC
Confidence 76521 145 47899998877776644 456788 88888873 2 356788888888753 345566678999
Q ss_pred CcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 168 PTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 168 PTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
|||. +|.+++++++++++.| .++.
T Consensus 152 ~tG~~~~~~~I~~la~~~g~~~ivD--~a~~ 180 (382)
T TIGR03403 152 ETGMIFPIKEIGEICKERGVLFHTD--AVQA 180 (382)
T ss_pred CCccccCHHHHHHHHHHcCCEEEEe--chhh
Confidence 9998 7999999999999999 5544
No 143
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.40 E-value=6.1e-12 Score=110.95 Aligned_cols=146 Identities=16% Similarity=0.132 Sum_probs=104.9
Q ss_pred ccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCC
Q psy6266 24 PWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNY 103 (218)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~g 103 (218)
|...+..++|..+++.. +. + .|...+++++.+++.. .. ..+. ++.|.|+++|+.+++.++. +.||
T Consensus 7 p~~~~~e~~a~~~~~~~--~~--~---~~~g~~~~~~e~~la~-~~----g~~~--~v~~~sgt~aL~~~l~al~-~~pG 71 (376)
T TIGR02379 7 PPVTGQELEYIAEAISE--GK--L---SGDGPFSRRCETWLEN-RT----GTKK--ALLTPSCTAALEMAALLLD-IQPG 71 (376)
T ss_pred CCCCHHHHHHHHHHHHc--CC--c---cCCcHHHHHHHHHHHH-Hh----CCCe--EEEeCCHHHHHHHHHHHcC-CCCc
Confidence 34455666676666643 12 2 2334556666655532 21 1233 3688999999998877652 5799
Q ss_pred CeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhh
Q psy6266 104 TTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVD 178 (218)
Q Consensus 104 d~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~ 178 (218)
|+|++++|+|+.+...+...|+ +++.++.. .+.+.+|++.+++.++ +++.+++ |+||||. +|.++|+
T Consensus 72 d~Viv~~~t~~~~~~~~~~~G~-~~v~vd~d-~~~~~~d~~~le~~i~---~~tk~Ii---p~~~~G~~~d~~~I~~la~ 143 (376)
T TIGR02379 72 DEVIMPSYTFVSTANAFVLRGA-KIVFVDIR-PDTMNIDETLIESAIT---HRTKAIV---PVHYAGVACDMDTIMALAN 143 (376)
T ss_pred CEEEECCCCcHHHHHHHHHcCC-EEEEEecC-CCcCCCCHHHHHHhcC---cCceEEE---EeCCCCCccCHHHHHHHHH
Confidence 9999999999999999999999 99999883 4446789888888775 3445554 5788997 8999999
Q ss_pred cCeEEEeeCCceeecc
Q psy6266 179 KHHVYLLRSGRINMCG 194 (218)
Q Consensus 179 ~~~i~ii~D~r~~y~~ 194 (218)
+|+++||+| .+++.
T Consensus 144 ~~~i~vIeD--aa~~~ 157 (376)
T TIGR02379 144 KHQLFVIED--AAQGV 157 (376)
T ss_pred HCCCEEEEE--Ccccc
Confidence 999999999 66543
No 144
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.40 E-value=3.7e-12 Score=110.79 Aligned_cols=149 Identities=14% Similarity=0.035 Sum_probs=104.7
Q ss_pred CccCchHHHHHHHHHhhcCCCCccCcCC-CCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhc
Q psy6266 23 KPWVLPVVRQAEKELAADDSLNHEYLPV-LGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRIL 101 (218)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~~~~~~Y~~~-~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~ 101 (218)
..++++.|.+|..+... .++|... .=.+++|+.+++++ + .+++++ ++.|.|+++++.++++++ +.
T Consensus 7 ~~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~~~~~la~~~-g------~~~~~~-~~~~~~~t~al~~~~~~~--~~ 72 (356)
T cd06451 7 PSNVPPRVLKAMNRPML----GHRSPEFLALMDEILEGLRYVF-Q------TENGLT-FLLSGSGTGAMEAALSNL--LE 72 (356)
T ss_pred CcCCCHHHHHHhCCCcc----CCCCHHHHHHHHHHHHHHHHHh-c------CCCCCE-EEEecCcHHHHHHHHHHh--CC
Confidence 45678888887654321 2223211 01456677666655 3 222333 357788899999988877 67
Q ss_pred CCCeEEecCCCchh--HHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHH
Q psy6266 102 NYTTFYYSKPTWEN--HRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVA 174 (218)
Q Consensus 102 ~gd~V~i~~P~y~~--y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~ 174 (218)
+||+|++++|++++ +...++..|+ +++.++.. . ...+|.+.+++.+++ .++.+++.+.++||||. +|.
T Consensus 73 ~g~~vl~~~~~~~~~~~~~~~~~~g~-~~~~v~~~-~-~~~~~~~~l~~~i~~--~~~~~v~i~~~~~~~G~~~~~~~i~ 147 (356)
T cd06451 73 PGDKVLVGVNGVFGDRWADMAERYGA-DVDVVEKP-W-GEAVSPEEIAEALEQ--HDIKAVTLTHNETSTGVLNPLEGIG 147 (356)
T ss_pred CCCEEEEecCCchhHHHHHHHHHhCC-CeEEeecC-C-CCCCCHHHHHHHHhc--cCCCEEEEeccCCCcccccCHHHHH
Confidence 99999999987665 5667788899 89999873 2 356899999998864 13344444678999998 788
Q ss_pred HHhhcCeEEEeeCCceee
Q psy6266 175 HMVDKHHVYLLRSGRINM 192 (218)
Q Consensus 175 ~l~~~~~i~ii~D~r~~y 192 (218)
++|++++++++.| +++
T Consensus 148 ~~a~~~~~~li~D--~~~ 163 (356)
T cd06451 148 ALAKKHDALLIVD--AVS 163 (356)
T ss_pred HHHHhcCCEEEEe--eeh
Confidence 9999999999999 654
No 145
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.39 E-value=3.8e-12 Score=114.41 Aligned_cols=153 Identities=14% Similarity=0.108 Sum_probs=106.5
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcC-----CCCcHHHHHHHHHHh---cCCCCCCCcCCCceE
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLP-----VLGLESFSSAATRML---LGGDASPPLREGRAF 79 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~-----~~G~~~lr~aia~~~---~~~~~~~~~~~~~v~ 79 (218)
+.++|+.|.+ +..++..++++..... ..++|+| ..| +|+++.++. .. ..+ .+.++
T Consensus 69 ~~~~lg~g~~-----~~~~p~~~~~~~~~~~----~~~~y~~~~~~~~~g---~~~~~~e~~~~la~-l~g--~~~~~-- 131 (447)
T PRK00451 69 YPSFLGAGAY-----DHYIPAVVDHIISRSE----FYTAYTPYQPEISQG---TLQAIFEYQTMICE-LTG--MDVAN-- 131 (447)
T ss_pred CcccCccccc-----CCcCcHHHHHHHhchh----HHHhcCCCCCccchH---HHHHHHHHHHHHHH-HhC--CCcce--
Confidence 5778999964 3466777776543321 2345777 444 555554322 11 111 23344
Q ss_pred EEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHH----hCCCcceeEeccCCcCccccHHHHHHHHhcCCC
Q psy6266 80 GVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLN----AGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPD 155 (218)
Q Consensus 80 ~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~----~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 155 (218)
+..|.|+++++..++.++. +.+||+|++++|.|++|...++. .|+ +++.+++. + . .+|.+.+++.+. +
T Consensus 132 v~~~~g~t~~~~~~~~a~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~-~~~~v~~~-~-~-~~d~~~l~~~i~---~ 203 (447)
T PRK00451 132 ASMYDGATALAEAALMAVR-ITKRKKVLVSGAVHPEYREVLKTYLKGQGI-EVVEVPYE-D-G-VTDLEALEAAVD---D 203 (447)
T ss_pred EEecCcHHHHHHHHHHHHH-hcCCCEEEEeCccCHHHHHHHHHHHHhCCc-EEEEecCC-C-C-CCCHHHHHHhcC---C
Confidence 3588999999888777652 36899999999999999987765 588 88888863 3 3 689999988885 3
Q ss_pred CcEEEEcccCCCCcHH-----HHHHHhhcCeEEEee
Q psy6266 156 NSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLR 186 (218)
Q Consensus 156 ~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~ 186 (218)
++.+++.++| ||||. +|.++|++++++++.
T Consensus 204 ~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv 238 (447)
T PRK00451 204 DTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIV 238 (447)
T ss_pred CeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEE
Confidence 4455555678 99998 799999999999887
No 146
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.39 E-value=4.3e-12 Score=112.13 Aligned_cols=123 Identities=11% Similarity=0.089 Sum_probs=90.2
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHH-hCCCcc
Q psy6266 50 VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLN-AGFTEA 128 (218)
Q Consensus 50 ~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~-~g~~~~ 128 (218)
..-..+|+++++++..+ +. +++|.|+++|+.+++.++ +.+||+|++++|+|+.....+.. .+. ..
T Consensus 50 ~p~~~~le~~lA~l~g~---------~~--v~~~~gg~~Ai~~~l~al--l~~GD~Vl~~~p~y~~~~~~~~~~~~~-~~ 115 (382)
T TIGR02080 50 NPTRDLLQQALAELEGG---------AG--AVVTNTGMSAIHLVTTAL--LGPDDLLVAPHDCYGGTYRLLNALAKK-GC 115 (382)
T ss_pred CchHHHHHHHHHHHhCC---------Cc--EEEEcCHHHHHHHHHHHH--cCCCCEEEEcCCCcHHHHHHHHHHHhh-cC
Confidence 34467888988887632 23 369999999999999877 68999999999999965544433 222 22
Q ss_pred eeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 129 REYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 129 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
..+...+ ..|.+.+++++. +++.+++.++|+||||. +|.++|++++++++.| ++|...
T Consensus 116 ~~v~~~d----~~d~~~l~~ai~---~~tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvvD--~a~~~~ 178 (382)
T TIGR02080 116 FRVLFVD----QGDEQALRAALA---QKPKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVVD--NTFLSP 178 (382)
T ss_pred eEEEEEC----CCCHHHHHHhcC---cCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE--CCCccc
Confidence 3333322 237788888775 34556666799999997 8999999999999999 888744
No 147
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.38 E-value=1.3e-11 Score=109.03 Aligned_cols=153 Identities=12% Similarity=0.024 Sum_probs=112.4
Q ss_pred cCchHHHHHHHHHhhcCCC------CccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHH
Q psy6266 25 WVLPVVRQAEKELAADDSL------NHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLH 98 (218)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~------~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~ 98 (218)
++++.+.+|..+....... ...+.....+.+||+.+++++.. +.+ +.|.|+++++.+++.++
T Consensus 31 p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~---------~~~--~~~~g~t~a~~~al~~l- 98 (387)
T PRK09331 31 ILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGM---------DEA--RVTHGAREGKFAVMHSL- 98 (387)
T ss_pred CCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCC---------CcE--EEeCCHHHHHHHHHHHh-
Confidence 5678888887776532111 11122233579999999987632 223 47899999999888876
Q ss_pred HhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC----CCCcEEEEcccCCCCcHH---
Q psy6266 99 RILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA----PDNSVIILHACAHNPTAQ--- 171 (218)
Q Consensus 99 ~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~----~~~~~iil~~~p~NPTG~--- 171 (218)
+.+||+|+++++++.+-...++..|+ +++.++....+.+.+|.+.+++.+++. .++..+++..+|+||||.
T Consensus 99 -~~~gd~Vlv~~~~h~s~~~~~~~~G~-~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~ 176 (387)
T PRK09331 99 -CKKGDYVVLDGLAHYTSYVAAERAGL-NVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD 176 (387)
T ss_pred -cCCCCEEEECCCchHHHHHHHHHcCC-EEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc
Confidence 67999999999997776666788899 899987621224568999999988642 124455555689999998
Q ss_pred --HHHHHhhcCeEEEeeCCceeec
Q psy6266 172 --QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 172 --~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+|.++|++++++++.| ++|.
T Consensus 177 l~~I~~la~~~g~~livD--~a~~ 198 (387)
T PRK09331 177 AKKVAKVAHEYGIPFLLN--GAYT 198 (387)
T ss_pred HHHHHHHHHHcCCEEEEE--CCcc
Confidence 7999999999999999 7876
No 148
>PRK07049 methionine gamma-lyase; Validated
Probab=99.38 E-value=8.3e-12 Score=111.82 Aligned_cols=124 Identities=15% Similarity=0.106 Sum_probs=91.0
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHH----HHhCC
Q psy6266 50 VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVF----LNAGF 125 (218)
Q Consensus 50 ~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~----~~~g~ 125 (218)
..-...|+++++++... +. ++++.||++|+..++.++ ++|||.|++++|+|+.|...+ +..|+
T Consensus 82 ~Pt~~~Le~~lA~leg~---------~~--~iv~~sG~~Ai~~~l~al--~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi 148 (427)
T PRK07049 82 HPNSEIVEDRLAVYEGA---------ES--AALFSSGMSAIATTLLAF--VRPGDVILHSQPLYGGTETLLAKTFRNFGV 148 (427)
T ss_pred CcCHHHHHHHHHHHhCC---------Cc--EEEEccHHHHHHHHHHHH--hCCCCEEEEcCCCcccHHHHHHHHHHhcCc
Confidence 44568999999987632 22 358899999999888776 689999999999999997764 45677
Q ss_pred CcceeEeccCCcCccccHHHHHHHHhcC--CCCcEEEEcccCCCCcHH-----HHHHHhhc------CeEEEeeCCceee
Q psy6266 126 TEAREYRYWNPEKRAVDFTGMYEDLVNA--PDNSVIILHACAHNPTAQ-----QVAHMVDK------HHVYLLRSGRINM 192 (218)
Q Consensus 126 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~--~~~~~iil~~~p~NPTG~-----~l~~l~~~------~~i~ii~D~r~~y 192 (218)
+++.++. ..|++.+++.+.+. .+++.+++..+|+||||. ++.+++++ ++++++.| +.|
T Consensus 149 -~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvD--ety 219 (427)
T PRK07049 149 -GAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACD--NTL 219 (427)
T ss_pred -EEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEE--CCc
Confidence 6666642 24666676666432 234556666799999998 66677665 78999999 887
Q ss_pred ccC
Q psy6266 193 CGL 195 (218)
Q Consensus 193 ~~l 195 (218)
.+.
T Consensus 220 ~~~ 222 (427)
T PRK07049 220 LGP 222 (427)
T ss_pred ccc
Confidence 653
No 149
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.38 E-value=6.1e-13 Score=103.02 Aligned_cols=94 Identities=12% Similarity=0.046 Sum_probs=72.3
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCC--CCcCCCceEEEEecc
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDAS--PPLREGRAFGVQTLS 85 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~--~~~~~~~v~~~~t~G 85 (218)
++|++.+|. .+++++.+++.+.++...+ ..|++..|.++||+++++++.+ ..+ ..+++++| ++|.|
T Consensus 58 dli~~~i~~--~p~~d~~~~~~i~~~~~~~-------a~Y~~~~G~~~lR~AiA~~l~~-~~g~~v~~~pd~I--vvt~G 125 (153)
T PLN02994 58 DLIEEWIEE--NPHADICTAEGTIDSFKDI-------ALFQDYHGLANFRKAIANFMAE-ARGGRVKFDADMI--VLSAG 125 (153)
T ss_pred HHHHHHHhC--CCccccCCcHHHHHHHHHH-------hcCCCCCCcHHHHHHHHHHHHH-HhCCCCccchhhe--EEcCC
Confidence 556666774 1234566777767665543 2399999999999999999965 544 34667775 59999
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchh
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWEN 115 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~ 115 (218)
+++|+.++++++ ++|||+|++++|+|+.
T Consensus 126 a~~al~~l~~~l--~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 126 ATAANEIIMFCI--ADPGDAFLVPTPYYAA 153 (153)
T ss_pred HHHHHHHHHHHH--cCCCCEEEEeCCCCCC
Confidence 999999999887 7899999999999973
No 150
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.36 E-value=6.9e-12 Score=111.06 Aligned_cols=124 Identities=11% Similarity=0.074 Sum_probs=91.6
Q ss_pred cCc--CCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHH-
Q psy6266 46 EYL--PVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLN- 122 (218)
Q Consensus 46 ~Y~--~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~- 122 (218)
.|. +..+..+|+++++++... .. .+++.+|++|+.+++.++ +++||+|++++|+|+.....+..
T Consensus 54 ~Y~r~~~p~~~~Le~~lA~~~g~-~~----------~i~~~sG~~Ai~~~l~al--l~~Gd~Vl~~~~~y~~t~~~~~~~ 120 (388)
T PRK07811 54 EYARTGNPTRTALEEQLAALEGG-AY----------GRAFSSGMAATDCLLRAV--LRPGDHIVIPNDAYGGTFRLIDKV 120 (388)
T ss_pred cccCCCCccHHHHHHHHHHHhCC-Cc----------eEEeCCHHHHHHHHHHHH--hCCCCEEEEcCCCchHHHHHHHHh
Confidence 355 557889999999998743 21 135567789999998877 68999999999999954333332
Q ss_pred ---hCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeecc
Q psy6266 123 ---AGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCG 194 (218)
Q Consensus 123 ---~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~ 194 (218)
.|+ ++..++. .|++.+++.+. +++.+++..+|+||||. +|.++|+++++++|.| ++|..
T Consensus 121 ~~~~gi-~~~~~d~-------~d~e~l~~~i~---~~tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~lIvD--~a~a~ 187 (388)
T PRK07811 121 FTRWGV-EYTPVDL-------SDLDAVRAAIT---PRTKLIWVETPTNPLLSITDIAALAELAHDAGAKVVVD--NTFAS 187 (388)
T ss_pred CcCCCe-EEEEeCC-------CCHHHHHHhcC---cCCeEEEEECCCCCcceecCHHHHHHHHHHcCCEEEEE--CCCCc
Confidence 355 4444421 37788887775 34556666799999997 7999999999999999 88864
Q ss_pred C
Q psy6266 195 L 195 (218)
Q Consensus 195 l 195 (218)
.
T Consensus 188 ~ 188 (388)
T PRK07811 188 P 188 (388)
T ss_pred c
Confidence 4
No 151
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.36 E-value=1.3e-11 Score=108.44 Aligned_cols=125 Identities=15% Similarity=0.058 Sum_probs=95.9
Q ss_pred cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCC-chhHHHHHHHhCCCcceeE
Q psy6266 53 LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPT-WENHRLVFLNAGFTEAREY 131 (218)
Q Consensus 53 ~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~-y~~y~~~~~~~g~~~~~~~ 131 (218)
+.++++++++++.. +.+ +++.|+++++..+++++ +.+||.|+++.|. ++.| ..++..|+ +++.+
T Consensus 53 ~~~~~e~lA~~~g~---------~~~--~i~~g~~~a~~~~~~~l--~~~gd~Vl~~~~~h~s~~-~~~~~~g~-~~~~~ 117 (370)
T TIGR02539 53 IHDFLEDLAEFLGM---------DEA--RVTHGAREGKFAVMHAL--CKEGDWVVLDGLAHYTSY-VAAERAGL-NVKEV 117 (370)
T ss_pred HHHHHHHHHHHhCC---------Cce--EEECChHHHHHHHHHHh--hCCCCEEEECCcccHHHH-HHHHHcCC-EEEEE
Confidence 46778887776532 122 36899999999988877 5799999998777 6656 56788999 89999
Q ss_pred eccCCcCccccHHHHHHHHhcCC----CCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeecc
Q psy6266 132 RYWNPEKRAVDFTGMYEDLVNAP----DNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCG 194 (218)
Q Consensus 132 ~~~~~~~~~~d~~~~~~~l~~~~----~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~ 194 (218)
+....+.+.+|++.+++.+.+.+ ++..+++.++|+||||. +|.++|++++++++.| ++|..
T Consensus 118 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livD--ea~~~ 187 (370)
T TIGR02539 118 PHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLN--CAYTV 187 (370)
T ss_pred ecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEE--Ccccc
Confidence 87533346789999999886321 23445555789999998 7999999999999999 88874
No 152
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.36 E-value=1.1e-11 Score=109.11 Aligned_cols=126 Identities=16% Similarity=0.153 Sum_probs=93.5
Q ss_pred CcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeE
Q psy6266 52 GLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREY 131 (218)
Q Consensus 52 G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~ 131 (218)
|..++++++.+++.. ..+ .++ ++.|.|+++|+.+++.++. +.|||+|++++|+|+++...+...|+ +++.+
T Consensus 28 g~~~~~~~~e~~la~-~~g----~~~--~v~~~sgt~al~~~l~~~~-~~~Gd~Viv~~~t~~~~~~~~~~~G~-~~v~~ 98 (375)
T PRK11706 28 GDGGFTRRCQQWLEQ-RFG----SAK--VLLTPSCTAALEMAALLLD-IQPGDEVIMPSYTFVSTANAFVLRGA-KIVFV 98 (375)
T ss_pred CCCHHHHHHHHHHHH-HhC----CCe--EEEECCHHHHHHHHHHHhC-CCCCCEEEECCCCcHHHHHHHHHcCC-EEEEE
Confidence 444666666665532 211 134 3588999999988776542 57899999999999999999999999 99999
Q ss_pred eccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 132 RYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 132 ~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
+.. .+.+.+|++.+++.+.+ ++.+++. .||||. +|.++|++++++||+| .+++..
T Consensus 99 d~d-~~~~~~d~~~le~~i~~---~tk~i~~---~~~~G~~~~~~~i~~la~~~~i~vIeD--~a~a~g 158 (375)
T PRK11706 99 DIR-PDTMNIDETLIEAAITP---KTRAIVP---VHYAGVACEMDTIMALAKKHNLFVVED--AAQGVM 158 (375)
T ss_pred ecC-CCcCCcCHHHHHHhcCC---CCeEEEE---eCCCCCccCHHHHHHHHHHcCCEEEEE--Cccccc
Confidence 873 44467899999888753 3444442 357885 7999999999999999 776543
No 153
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.35 E-value=1.3e-11 Score=109.47 Aligned_cols=116 Identities=16% Similarity=0.167 Sum_probs=88.6
Q ss_pred cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHH----HHHHhCCCcc
Q psy6266 53 LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRL----VFLNAGFTEA 128 (218)
Q Consensus 53 ~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~----~~~~~g~~~~ 128 (218)
..+|++.++++.-. +. +++|.||++|+.+++.++ +.+||+|+++++.|++... .++..|+ ++
T Consensus 63 ~~~le~~la~l~g~---------~~--~v~~ssG~~Ai~~al~al--~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~-~v 128 (390)
T PRK08133 63 VTMFQERLAALEGA---------EA--CVATASGMAAILAVVMAL--LQAGDHVVSSRSLFGSTVSLFEKIFARFGI-ET 128 (390)
T ss_pred HHHHHHHHHHHhCC---------Cc--EEEECCHHHHHHHHHHHH--hCCCCEEEEccCcchhHHHHHHHHHHHcCc-EE
Confidence 56888888876532 22 358899999999888776 6799999999998876443 4556788 78
Q ss_pred eeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeecc
Q psy6266 129 REYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCG 194 (218)
Q Consensus 129 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~ 194 (218)
+.++.. |.+.+++.+. +++++++..+|+||||. +|.++|+++++++|.| ++|..
T Consensus 129 ~~vd~~-------d~~~l~~~i~---~~tklV~ie~p~NptG~v~dl~~I~~la~~~gi~livD--~t~~~ 187 (390)
T PRK08133 129 TFVDLT-------DLDAWRAAVR---PNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVD--NCFCT 187 (390)
T ss_pred EEECCC-------CHHHHHHhcC---cCCeEEEEECCCCCCCCcCCHHHHHHHHHHcCCEEEEE--CCCcc
Confidence 777541 5677777774 34556666789999997 7999999999999999 77643
No 154
>PRK14012 cysteine desulfurase; Provisional
Probab=99.35 E-value=2.7e-11 Score=107.57 Aligned_cols=158 Identities=10% Similarity=0.053 Sum_probs=111.4
Q ss_pred EEeCCCCCccCchHHHHHHHHHhh--c-CCCCcc------CcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccC
Q psy6266 16 AYRTEECKPWVLPVVRQAEKELAA--D-DSLNHE------YLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSG 86 (218)
Q Consensus 16 ~~~~~~~~~~~~~~v~~a~~~~~~--~-~~~~~~------Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~ 86 (218)
+|-|..+..++++.|.++..+... . ....+. +.....+.++|+.+++++ + .+++++ +.|.|+
T Consensus 5 iyld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~-g------~~~~~v--~~~~g~ 75 (404)
T PRK14012 5 IYLDYSATTPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI-G------ADPREI--VFTSGA 75 (404)
T ss_pred EEecCcCCCCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc-C------cCcCeE--EEeCCH
Confidence 455555656788899998766553 1 011111 111134677888888765 3 233444 588999
Q ss_pred hhHHHHHHHHHHH--hcCCCeEEecCCCchhHHHHHHH---hCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEE
Q psy6266 87 TGALRVGAEFLHR--ILNYTTFYYSKPTWENHRLVFLN---AGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIIL 161 (218)
Q Consensus 87 ~~al~~~~~~l~~--l~~gd~V~i~~P~y~~y~~~~~~---~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil 161 (218)
++++.+++.++.. +.+||+|+++++.|++....++. .|+ +++.++.. +.+.+|.+.+++.+. +++.+++
T Consensus 76 t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~-~~~~v~~~--~~g~~d~~~l~~~i~---~~t~lv~ 149 (404)
T PRK14012 76 TESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGF-EVTYLDPQ--SNGIIDLEKLEAAMR---DDTILVS 149 (404)
T ss_pred HHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCC-EEEEEccC--CCCcCCHHHHHHhcC---CCCEEEE
Confidence 9999988776532 35799999999999887654443 588 88888762 345679999988885 3455666
Q ss_pred cccCCCCcHH-----HHHHHhhcCeEEEeeCC
Q psy6266 162 HACAHNPTAQ-----QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 162 ~~~p~NPTG~-----~l~~l~~~~~i~ii~D~ 188 (218)
...++||||. +|.++|++++++++.|+
T Consensus 150 ~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~ 181 (404)
T PRK14012 150 IMHVNNEIGVIQDIAAIGEICRERGIIFHVDA 181 (404)
T ss_pred EECcCCCccchhhHHHHHHHHHHcCCEEEEEc
Confidence 6789999998 79999999999999993
No 155
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.35 E-value=3.1e-11 Score=105.57 Aligned_cols=125 Identities=14% Similarity=0.127 Sum_probs=92.4
Q ss_pred HHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHh----cCCCeEEecCCCchhHHHHHHHhCCCcce
Q psy6266 54 ESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRI----LNYTTFYYSKPTWENHRLVFLNAGFTEAR 129 (218)
Q Consensus 54 ~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l----~~gd~V~i~~P~y~~y~~~~~~~g~~~~~ 129 (218)
.++|+.+++++ + .+++.+ +++.|+++++.+++.++..+ .+||+|++++|.|.+|...++..|+ +++
T Consensus 62 ~~~~~~la~~~-g------~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~-~~~ 131 (373)
T TIGR03812 62 EEVVGSLGNLL-H------LPDAYG--YIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGL-ELR 131 (373)
T ss_pred HHHHHHHHHHh-C------CCCCCe--EEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCC-eEE
Confidence 45666666554 3 222333 47889999988776655322 3679999999999999998999999 899
Q ss_pred eEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 130 EYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 130 ~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
.++.. +.+.+|++.+++.+.+ ++..++..+|+||||. +|.++|++++++++.| ++|.++
T Consensus 132 ~v~~~--~~~~~d~~~l~~~l~~---~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD--~a~~~~ 195 (373)
T TIGR03812 132 YAPLD--EDYTVDVKDVEDLIDD---NTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVD--AAFGGF 195 (373)
T ss_pred EEeeC--CCCCcCHHHHHHHHhh---CcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEE--cCchhH
Confidence 88872 3456799999988853 2332333357999998 8999999999999999 788643
No 156
>PRK02948 cysteine desulfurase; Provisional
Probab=99.35 E-value=2e-11 Score=107.39 Aligned_cols=156 Identities=12% Similarity=0.054 Sum_probs=106.5
Q ss_pred EeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCC------CcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHH
Q psy6266 17 YRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVL------GLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGAL 90 (218)
Q Consensus 17 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~------G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al 90 (218)
|-|..+..++++.|.+|+.+..++.....+..... =+.++|+.+++++. .++++| +.|.|+++++
T Consensus 3 yld~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g-------~~~~~i--~~~~g~t~a~ 73 (381)
T PRK02948 3 YLDYAATTPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIG-------GEEQGI--YFTSGGTESN 73 (381)
T ss_pred eccCCCCCCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhC-------CCCCeE--EEeCcHHHHH
Confidence 33444545678899999877664311111111111 14577788877653 234554 5889999999
Q ss_pred HHHHHHHHH--hcCCCeEEecCCCchhHH---HHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 91 RVGAEFLHR--ILNYTTFYYSKPTWENHR---LVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 91 ~~~~~~l~~--l~~gd~V~i~~P~y~~y~---~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
..+++++.. ..+||.|+++++.|+++. ..++..|+ +++.++.. +.+.+|++.+++.+. +++.+++..+|
T Consensus 74 ~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~-~v~~v~~~--~~~~~d~~~l~~~l~---~~~~lv~~~~~ 147 (381)
T PRK02948 74 YLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGY-TVTEIPVD--KSGLIRLVDLERAIT---PDTVLASIQHA 147 (381)
T ss_pred HHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCC-EEEEEeeC--CCCCCCHHHHHHhcC---CCCEEEEEECC
Confidence 888776632 146899999996666554 44566788 88888763 235679999988775 34556666789
Q ss_pred CCCcHH-----HHHHHhhcCeEEEeeC
Q psy6266 166 HNPTAQ-----QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 166 ~NPTG~-----~l~~l~~~~~i~ii~D 187 (218)
+||||. +|.++|++++++++.|
T Consensus 148 ~n~tG~~~~~~~I~~l~~~~~~~vivD 174 (381)
T PRK02948 148 NSEIGTIQPIAEIGALLKKYNVLFHSD 174 (381)
T ss_pred cCCcEeehhHHHHHHHHHHcCCEEEEE
Confidence 999998 7899999999999999
No 157
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.34 E-value=9.9e-12 Score=110.62 Aligned_cols=116 Identities=16% Similarity=0.167 Sum_probs=84.7
Q ss_pred cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchh----HHHHHHHhCCCcc
Q psy6266 53 LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWEN----HRLVFLNAGFTEA 128 (218)
Q Consensus 53 ~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~----y~~~~~~~g~~~~ 128 (218)
..+|++.++++... ++. +++.+|++|+.++++++ +.|||+|+++.|.|+. +....+..|. ++
T Consensus 62 ~~~Le~~lA~l~g~--------~~~---v~~~sG~~Ai~~~l~al--l~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~-~v 127 (405)
T PRK08776 62 RDLLGEALAELEGG--------AGG---VITATGMGAINLVLNAL--LQPGDTLVVPHDAYGGSWRLFNALAKKGHF-AL 127 (405)
T ss_pred HHHHHHHHHHHhCC--------Cce---EEEcCHHHHHHHHHHHH--hCCCCEEEEccCCchHHHHHHHHHHHhcCc-EE
Confidence 45677777765422 122 46777789999988877 6899999999999997 3344444565 55
Q ss_pred eeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeecc
Q psy6266 129 REYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCG 194 (218)
Q Consensus 129 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~ 194 (218)
+.++. .|++.+++.+. +++.+++.++||||||. +|.++|+++++++|.| ++|..
T Consensus 128 ~~v~~-------~d~~~l~~~i~---~~tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~vIvD--~a~a~ 186 (405)
T PRK08776 128 ITADL-------TDPRSLADALA---QSPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVD--NTFLS 186 (405)
T ss_pred EEECC-------CCHHHHHHhcC---cCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEE--CCCcc
Confidence 55532 36777877774 34455666799999998 7899999999999999 88863
No 158
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.34 E-value=1.3e-11 Score=105.26 Aligned_cols=130 Identities=5% Similarity=-0.074 Sum_probs=97.7
Q ss_pred CcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCC
Q psy6266 47 YLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFT 126 (218)
Q Consensus 47 Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~ 126 (218)
+.|..=+.++++.+++++ + . ++. .++|.|+++++..++.++ +.|||+|++++|+|.+....+...|+
T Consensus 55 ~~~~g~i~~~~~~~A~~~-g-a-------~~~-~~~~~Gst~a~~~~l~al--~~~gd~Vlv~~~~h~s~~~~~~~~g~- 121 (294)
T cd00615 55 LDPTGPIKEAQELAARAF-G-A-------KHT-FFLVNGTSSSNKAVILAV--CGPGDKILIDRNCHKSVINGLVLSGA- 121 (294)
T ss_pred CCCChHHHHHHHHHHHHh-C-C-------CCE-EEEcCcHHHHHHHHHHHc--CCCCCEEEEeCCchHHHHHHHHHCCC-
Confidence 334433778888888765 3 2 222 356899999998888776 68999999999999999988999999
Q ss_pred cceeEeccCCcC----ccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 127 EAREYRYWNPEK----RAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 127 ~~~~~~~~~~~~----~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+++.++....+. ..+|.+.+++.+++. ++..+++.++| ||||. +|.++|++++++++.| +++.
T Consensus 122 ~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~-~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livD--eA~~ 193 (294)
T cd00615 122 VPVYLKPERNPYYGIAGGIPPETFKKALIEH-PDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVD--EAHG 193 (294)
T ss_pred EEEEecCccCcccCcCCCCCHHHHHHHHHhC-CCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEE--Ccch
Confidence 888876522221 257999999998653 23344444567 79997 7999999999999999 8875
No 159
>KOG1412|consensus
Probab=99.33 E-value=3e-13 Score=113.41 Aligned_cols=162 Identities=23% Similarity=0.366 Sum_probs=114.5
Q ss_pred ccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHH--HHHHHHHHHhcCCCeEEecCCCchhHHHHHHH
Q psy6266 45 HEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGAL--RVGAEFLHRILNYTTFYYSKPTWENHRLVFLN 122 (218)
Q Consensus 45 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al--~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~ 122 (218)
-+|+...|++.|..+...+.|| ++.||+..+..++...+. .+.+|+.. + -+.-+..+|.|+. .++..
T Consensus 235 iR~fV~~g~e~fv~QSFaKNfG------lYneRvGnltvv~~n~a~i~~v~SQl~l-v--iR~~~SNPPAyGA--rIV~k 303 (410)
T KOG1412|consen 235 IRYFVEQGFELFVCQSFAKNFG------LYNERVGNLTVVVNNPAVIAGVKSQLTL-V--IRSNWSNPPAYGA--RIVHK 303 (410)
T ss_pred HHHHHhcCCeEEEEhhhhhhcc------cccccccceEEEecChhHHHHHHHHHHH-H--HhhccCCCcchhh--HHHHH
Confidence 3677788999999999999998 666777655444443332 23344321 2 2444677888776 34444
Q ss_pred hCCCcceeEeccCCcCccc--cHHHHHHHHhcC-----CCCc--EEEEc---ccCCCCcHHHHHHHhhcCeEEEeeCCce
Q psy6266 123 AGFTEAREYRYWNPEKRAV--DFTGMYEDLVNA-----PDNS--VIILH---ACAHNPTAQQVAHMVDKHHVYLLRSGRI 190 (218)
Q Consensus 123 ~g~~~~~~~~~~~~~~~~~--d~~~~~~~l~~~-----~~~~--~iil~---~~p~NPTG~~l~~l~~~~~i~ii~D~r~ 190 (218)
. +++|.....|..+-..+ ++..|+.+|+.. ++++ +|+-| +|+..-|-.|+..+.++|+||+++|||+
T Consensus 304 v-L~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLtp~qV~~li~~h~vyLl~~GRI 382 (410)
T KOG1412|consen 304 V-LSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGLTPAQVDHLIENHKVYLLSDGRI 382 (410)
T ss_pred H-hcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCCCHHHHHHHHHhceEEEecCCcE
Confidence 4 44788887886654444 777788777642 4553 33332 2444555569999999999999999999
Q ss_pred eeccCCCCCHHHHHHHHHHHHHcCCCCC
Q psy6266 191 NMCGLTTQNLDHVAQAIHDAVTSIPSHL 218 (218)
Q Consensus 191 ~y~~l~~~ni~~~~~a~~~~~~~~~~~~ 218 (218)
+.+|++-+|+||+|+||+++||..++|.
T Consensus 383 nisGLN~~NveyVAkAIde~Vr~~~~~~ 410 (410)
T KOG1412|consen 383 NISGLNMKNVEYVAKAIDETVRAIKSNA 410 (410)
T ss_pred eeeccccccHHHHHHHHHHHHHhhccCC
Confidence 9999999999999999999999998873
No 160
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.33 E-value=1.6e-11 Score=108.74 Aligned_cols=124 Identities=11% Similarity=0.104 Sum_probs=89.2
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHH-hCCCc
Q psy6266 49 PVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLN-AGFTE 127 (218)
Q Consensus 49 ~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~-~g~~~ 127 (218)
+......|+++++++..+ +. +++|.|+++|+.+++.++ +.|||+|++++|+|+.....+.. ... .
T Consensus 50 ~~pt~~~L~~~lA~l~g~---------~~--~i~~~sg~~Ai~~~l~~l--~~~GD~Vl~~~~~y~~~~~~~~~~~~~-~ 115 (386)
T PRK08045 50 GNPTRDVVQRALAELEGG---------AG--AVLTNTGMSAIHLVTTVF--LKPGDLLVAPHDCYGGSYRLFDSLAKR-G 115 (386)
T ss_pred CCccHHHHHHHHHHHhCC---------Ce--EEEECCHHHHHHHHHHHH--cCCCCEEEEcCCCcHHHHHHHHHHHhh-C
Confidence 345678999999987532 12 468999999999988876 68999999999999964433332 211 1
Q ss_pred ceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 128 AREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 128 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
.+.+...+ ..|.+.+++.+. +++.+++.++|+||||. +|.++|+++++++|.| ++|...
T Consensus 116 gi~v~~vd----~~d~e~l~~~l~---~~tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~vivD--eay~~~ 179 (386)
T PRK08045 116 CYRVLFVD----QGDEQALRAALA---EKPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVD--NTFLSP 179 (386)
T ss_pred CeEEEEeC----CCCHHHHHHhcc---cCCeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE--CCCCcc
Confidence 12222222 247788887774 34455566899999997 7999999999999999 888754
No 161
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.33 E-value=1.9e-11 Score=107.14 Aligned_cols=177 Identities=11% Similarity=0.028 Sum_probs=112.7
Q ss_pred CCCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCC-CccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEE
Q psy6266 2 YMSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSL-NHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFG 80 (218)
Q Consensus 2 ~~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~ 80 (218)
+...|...||+..|...+.-| ...+.|.+|..+.+++... ...| +..-..+|.+.+++++ + . ++ +
T Consensus 22 ~~~~g~~~id~~~~~~~~~lG--~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~-g------~--~~--~ 87 (379)
T TIGR00707 22 YDVNGKEYLDFVAGIAVNSLG--HAHPKLVEALKEQLEKLVHVSNLY-YTEPQEELAEKLVEHS-G------A--DR--V 87 (379)
T ss_pred EeCCCCEEEEcCcchhhccCC--CCCHHHHHHHHHHHhhcccccccc-CCHHHHHHHHHHHhhC-C------C--CE--E
Confidence 346788899999986655666 3568888887776643111 1223 2222344444444432 2 1 23 4
Q ss_pred EEeccChhHHHHHHHHHHHh-c----CCCeEEecCCCchhHHHHHHHhCCCccee----EeccCCcCcc--ccHHHHHHH
Q psy6266 81 VQTLSGTGALRVGAEFLHRI-L----NYTTFYYSKPTWENHRLVFLNAGFTEARE----YRYWNPEKRA--VDFTGMYED 149 (218)
Q Consensus 81 ~~t~G~~~al~~~~~~l~~l-~----~gd~V~i~~P~y~~y~~~~~~~g~~~~~~----~~~~~~~~~~--~d~~~~~~~ 149 (218)
+.+.||++|+.++++++... . ++|+|++++|+|..|.......++ .+.. .+...+..+. .|++.+++.
T Consensus 88 ~~~~sg~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 166 (379)
T TIGR00707 88 FFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATG-QPKYQKGFEPLVPGFSYAPYNDIESLKKA 166 (379)
T ss_pred EEeCCcHHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcC-ChhhhccCCCCCCCceeeCCCCHHHHHHH
Confidence 68899999999988765322 2 379999999999988876666665 4322 1221110111 177888877
Q ss_pred HhcCCCCcEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 150 LVNAPDNSVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 150 l~~~~~~~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
+.+ +..+++.+..+||+|. +|.++|+++++++|.| ++|.++.+.
T Consensus 167 ~~~---~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~D--e~~~~~~~~ 219 (379)
T TIGR00707 167 IDD---ETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFD--EVQTGIGRT 219 (379)
T ss_pred hhh---CeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEe--ccccCCCcc
Confidence 753 3344444555666663 6889999999999999 999987654
No 162
>PLN02483 serine palmitoyltransferase
Probab=99.33 E-value=2.3e-11 Score=110.73 Aligned_cols=167 Identities=10% Similarity=-0.023 Sum_probs=114.0
Q ss_pred CCCCceeeeeeeEEeCCC-CCccCchHHHHHHHHHhhc-CCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEE-CKPWVLPVVRQAEKELAAD-DSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~-~~~~~~~~v~~a~~~~~~~-~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
..+...|||+-=.|-... .++.+.+.+.+|..+.-.. ....+.|....+..+|++++|+++.. ++.+ +
T Consensus 97 ~~~~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~--------~~ai--~ 166 (489)
T PLN02483 97 TKTRRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGK--------PAAI--V 166 (489)
T ss_pred CCCceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCC--------CcEE--E
Confidence 345678898877765443 2344566777776554311 02234588899999999999998743 2222 3
Q ss_pred EeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC----CC--
Q psy6266 82 QTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA----PD-- 155 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~----~~-- 155 (218)
.+.| ..+...++.++ +.|||+|++++|+|+++...++..|+ +++.++.. |.+.+++.|++. .+
T Consensus 167 ~~~G-~~an~~~i~al--~~~Gd~Vi~d~~~h~s~~~~~~~~Ga-~v~~~~~~-------d~~~le~~l~~~i~~~~p~t 235 (489)
T PLN02483 167 FGMG-YATNSTIIPAL--IGKGGLIISDSLNHNSIVNGARGSGA-TIRVFQHN-------TPSHLEEVLREQIAEGQPRT 235 (489)
T ss_pred ECCH-HHHHHHHHHHh--CCCCCEEEEcchhhHHHHHHHHHcCC-eEEEEeCC-------CHHHHHHHHHhhhhcccccc
Confidence 4554 44444555555 68999999999999999999999999 88888642 233333333321 11
Q ss_pred ----CcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 156 ----NSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 156 ----~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+.++++.....|++|. +|.++|+++++++|.| ++|+
T Consensus 236 ~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livD--Ea~s 280 (489)
T PLN02483 236 HRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLD--EAHS 280 (489)
T ss_pred ccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEE--CcCc
Confidence 2345665666799986 8999999999999999 8886
No 163
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.32 E-value=2.6e-11 Score=107.70 Aligned_cols=154 Identities=10% Similarity=-0.047 Sum_probs=108.0
Q ss_pred CCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhc
Q psy6266 22 CKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRIL 101 (218)
Q Consensus 22 ~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~ 101 (218)
|...+++.|++|+.+-. ..|. +.+.+++++++.+++.. ..+ ...+++ ++++.++++++..++..+ ++
T Consensus 16 GP~~~~~~V~~a~~~~~------~~~~-~~~~~~~~~~~~~~l~~-~~g--~~~~~~-vi~~~~gt~a~~~a~~~~--~~ 82 (401)
T PLN02409 16 GPVNIPERVLRAMNRPN------EDHR-SPAFPALTKELLEDVKY-IFK--TKSGTP-FIFPTTGTGAWESALTNT--LS 82 (401)
T ss_pred CCCCCCHHHHHHhcCCC------CCCC-CHHHHHHHHHHHHHHHH-HhC--CCCCCE-EEEeCCcHHHHHHHHHhc--CC
Confidence 34567888888754321 1122 55778888888776633 222 223333 467778899988877655 68
Q ss_pred CCCeEEecCCCchhH--HHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCC-CCcEEEEcccCCCCcHH-----HH
Q psy6266 102 NYTTFYYSKPTWENH--RLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAP-DNSVIILHACAHNPTAQ-----QV 173 (218)
Q Consensus 102 ~gd~V~i~~P~y~~y--~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~~~~iil~~~p~NPTG~-----~l 173 (218)
|||+|++++|.|+++ ..+++..|+ +++.++.. . ...++++.+++.+++.+ +++.+++.+.++||||. +|
T Consensus 83 ~Gd~Vlv~~~~~~~~~~~~~~~~~g~-~v~~v~~~-~-~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i 159 (401)
T PLN02409 83 PGDKVVSFRIGQFSLLWIDQMQRLNF-DVDVVESP-W-GQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGV 159 (401)
T ss_pred CCCEEEEeCCCchhHHHHHHHHHcCC-ceEEEECC-C-CCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHH
Confidence 999999999988766 356777898 89988763 2 23578999999887421 24455555678999998 68
Q ss_pred HHH--hhcCeEEEeeCCceeec
Q psy6266 174 AHM--VDKHHVYLLRSGRINMC 193 (218)
Q Consensus 174 ~~l--~~~~~i~ii~D~r~~y~ 193 (218)
.++ |++++++++.| .+++
T Consensus 160 ~~l~~~~~~g~~~vvD--~v~s 179 (401)
T PLN02409 160 RKLLDCAQHPALLLVD--GVSS 179 (401)
T ss_pred HHHHhhhccCcEEEEE--cccc
Confidence 888 99999999999 5543
No 164
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.32 E-value=4.4e-11 Score=106.14 Aligned_cols=157 Identities=12% Similarity=0.105 Sum_probs=109.6
Q ss_pred EeCCCCCccCchHHHHHHHHHhhcCCCC-cc------CcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhH
Q psy6266 17 YRTEECKPWVLPVVRQAEKELAADDSLN-HE------YLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGA 89 (218)
Q Consensus 17 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~~------Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~a 89 (218)
|-|..+..++++.|.++..+..+..... +. +.....++++|+.+++++ + .++++| +.|.|++++
T Consensus 6 yld~aa~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-g------~~~~~v--~~~~g~t~a 76 (402)
T TIGR02006 6 YLDYAATTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI-G------ADSREI--VFTSGATES 76 (402)
T ss_pred EeeCCcCCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh-C------CCCCeE--EEeCCHHHH
Confidence 4444444577889999876655321111 11 111234677788888765 3 234454 588999999
Q ss_pred HHHHHHHHHH--hcCCCeEEecCCCchhHHHHH---HHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 90 LRVGAEFLHR--ILNYTTFYYSKPTWENHRLVF---LNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 90 l~~~~~~l~~--l~~gd~V~i~~P~y~~y~~~~---~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
+.+++.++.. ..+||+|+++++.|+++...+ +..|+ +++.++.. +.+.+|.+.+++.+. +++.+++.++
T Consensus 77 ~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~-~v~~v~~~--~~~~~d~~~l~~~l~---~~~~lv~v~~ 150 (402)
T TIGR02006 77 NNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGF-EVTYLPPK--SNGLIDLEELKAAIR---DDTILVSIMH 150 (402)
T ss_pred HHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCC-EEEEEccC--CCCcCCHHHHHHhcC---CCCEEEEEEC
Confidence 9988766532 257999999999999866544 34588 88888763 345679999988875 3355666678
Q ss_pred CCCCcHH-----HHHHHhhcCeEEEeeCC
Q psy6266 165 AHNPTAQ-----QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 165 p~NPTG~-----~l~~l~~~~~i~ii~D~ 188 (218)
++||||. +|.++|++++++++.|+
T Consensus 151 ~~n~tG~~~~~~~I~~l~~~~g~~livD~ 179 (402)
T TIGR02006 151 VNNEIGVIQDIAAIGEICRERKVFFHVDA 179 (402)
T ss_pred CCcCceecccHHHHHHHHHHcCCEEEEEc
Confidence 9999998 79999999999999993
No 165
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.32 E-value=1.4e-11 Score=109.37 Aligned_cols=123 Identities=12% Similarity=0.034 Sum_probs=90.6
Q ss_pred ccCcC--CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHH----
Q psy6266 45 HEYLP--VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRL---- 118 (218)
Q Consensus 45 ~~Y~~--~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~---- 118 (218)
..|+- .....+|+++++++... +. ++.|.|+++|+.+++.++ +.|||+|++++|+|+.+..
T Consensus 57 ~~Y~r~~~pt~~~Le~~lA~l~g~---------~~--~l~~~sgt~Ai~~~l~al--~~~GD~Vl~~~~~y~~~~~~~~~ 123 (394)
T PRK07050 57 WRYGLHATPTSLALAQRLAEIEGG---------RH--ALLQPSGLAAISLVYFGL--VKAGDDVLIPDNAYGPNRDHGEW 123 (394)
T ss_pred cccCCCCCHHHHHHHHHHHHHhCC---------Ce--EEEeccHHHHHHHHHHHH--hCCCCEEEEecCCcccHHHHHHH
Confidence 34544 33456777777765422 23 468999999999999877 6899999999999998764
Q ss_pred HHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 119 VFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 119 ~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
..+..|+ ++..++. . +.+.+++.++ +++.+++.++|+||||. +|.++|++++++++.| ++|.
T Consensus 124 ~~~~~Gi-~v~~vd~---~----~~~~l~~~i~---~~tklV~le~p~Np~~~~~di~~I~~ia~~~gi~livD--~a~a 190 (394)
T PRK07050 124 LARDFGI-TVRFYDP---L----IGAGIADLIQ---PNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAID--NTYS 190 (394)
T ss_pred HHHhcCe-EEEEECC---C----CHHHHHHhcC---CCCeEEEEECCCCCCccHhhHHHHHHHHHHcCCEEEEE--CCcc
Confidence 4456687 7776632 1 2345666554 45566677899999997 7889999999999999 7775
No 166
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.31 E-value=2.2e-11 Score=108.25 Aligned_cols=122 Identities=10% Similarity=0.086 Sum_probs=91.6
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHH----HHHhC
Q psy6266 49 PVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLV----FLNAG 124 (218)
Q Consensus 49 ~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~----~~~~g 124 (218)
+..-..+|++.++++.-+ +. .+++.+|+.|+.+++.++ +.|||+|++++|.|++.... ++..|
T Consensus 62 ~~p~~~~le~~lA~l~g~---------~~--~i~~ssG~~Ai~~~l~al--l~~GD~Vi~~~~~y~~~~~~~~~~~~~~G 128 (398)
T PRK08249 62 TNPTVQAFEEKVRILEGA---------EA--ATAFSTGMAAISNTLYTF--LKPGDRVVSIKDTYGGTNKIFTEFLPRMG 128 (398)
T ss_pred CChHHHHHHHHHHHHhCC---------Ce--EEEeCChHHHHHHHHHHh--cCCCCEEEEcCCchHHHHHHHHHHHhhCC
Confidence 344568899999887633 22 357788899999888766 67999999999999986543 34556
Q ss_pred CCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccCC
Q psy6266 125 FTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGLT 196 (218)
Q Consensus 125 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l~ 196 (218)
+ ++..++ ..|++.+++.++ +++.+++..+|+||||. +|.++|+++++++|.| ++|....
T Consensus 129 i-~v~~vd-------~~d~e~l~~~i~---~~tklV~ie~p~NPtg~v~dl~~I~~la~~~gi~livD--~t~a~~~ 192 (398)
T PRK08249 129 V-DVTLCE-------TGDHEQIEAEIA---KGCDLLYLETPTNPTLKIVDIERLAAAAKKVGALVVVD--NTFATPI 192 (398)
T ss_pred e-EEEEcC-------CCCHHHHHHhcC---CCCeEEEEECCCCCCCccCCHHHHHHHHHHcCCEEEEE--CCcCccc
Confidence 6 555442 247888888875 34556666789999997 8999999999999999 8887543
No 167
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.31 E-value=4.6e-11 Score=103.41 Aligned_cols=151 Identities=13% Similarity=0.066 Sum_probs=104.6
Q ss_pred CccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcC
Q psy6266 23 KPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILN 102 (218)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~ 102 (218)
...+++.|++++...... ....|. .-...+|+.+++++.. +++.+.+++|.|+++++..++..+ +.+
T Consensus 7 p~~~~~~~~~~~~~~~~~--~~~~~~--~~~~~~~~~la~~~~~-------~~~~~~i~~~~~gt~~l~~~~~~~--~~~ 73 (355)
T TIGR03301 7 PLSTSATVRDAMLVDWCH--WDSEFN--DVTDQVRDRLLALAGG-------DDNHTCVLLQGSGTFAVEATIGSL--VPR 73 (355)
T ss_pred CCCCCHHHHHHhhhhccC--CCHHHH--HHHHHHHHHHHHHhcC-------CCCCcEEEEeCCcHHHHHHHHHhc--cCC
Confidence 356788899887663211 112343 3357788888886643 223233457889999999988876 567
Q ss_pred CCeEEec-CCCchh-HHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHH
Q psy6266 103 YTTFYYS-KPTWEN-HRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAH 175 (218)
Q Consensus 103 gd~V~i~-~P~y~~-y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~ 175 (218)
+|+|++. +++|+. +...++..|+ +++.++. .+...+|++.+++.+++. ++..+++.+.++||||. +|.+
T Consensus 74 ~~~vi~~~~~~~~~~~~~~a~~~g~-~~~~i~~--~~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~~G~~~~~~~i~~ 149 (355)
T TIGR03301 74 DGKLLVLINGAYGERLAKICEYLGI-PHTDLNF--SEYEPPDLNRIEEALAAD-PDITHVATVHHETTTGILNPLEAIAK 149 (355)
T ss_pred CCeEEEECCCchhhHHHHHHHHcCC-ceEEEec--CCCCCCCHHHHHHHHHhC-CCceEEEEEecCCcccchhHHHHHHH
Confidence 8876654 555665 5567788898 8888876 224578999999988753 33344444568899998 7999
Q ss_pred HhhcCeEEEeeCCceee
Q psy6266 176 MVDKHHVYLLRSGRINM 192 (218)
Q Consensus 176 l~~~~~i~ii~D~r~~y 192 (218)
+|++|+++++.| ..+
T Consensus 150 l~~~~~~~livD--~~~ 164 (355)
T TIGR03301 150 VARSHGAVLIVD--AMS 164 (355)
T ss_pred HHHHcCCEEEEE--ecc
Confidence 999999999999 544
No 168
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.31 E-value=2.5e-11 Score=110.28 Aligned_cols=161 Identities=12% Similarity=0.004 Sum_probs=110.1
Q ss_pred eeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccC---cCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChh
Q psy6266 12 EIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEY---LPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTG 88 (218)
Q Consensus 12 l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y---~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~ 88 (218)
+++|.+ ...+++.|.++....... ...|.| ..++|..+++.++.+++.. ..+. + ++....+.|+++
T Consensus 73 ~g~G~~-----~~~~~p~i~~~~~~~~~~-~~~tpYq~e~~sqG~lel~~~~~~~la~-l~G~--~--~~~l~~~~GA~a 141 (481)
T PRK04366 73 YPLGSC-----TMKYNPKINEKVARLPGF-AELHPLQPEETVQGALELMYELQEWLKE-ITGM--D--AVTLQPAAGAHG 141 (481)
T ss_pred ecCccc-----CCCCCHHHHHHHHhCcch-hcCCCCCChhhhhHHHHHHHHHHHHHHH-HhCC--C--ceEEEeCcHHHH
Confidence 566643 346678888776553211 245678 5688999999999988854 3332 2 333334455555
Q ss_pred HHHHHHHHH-HHhcCCC----eEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcc
Q psy6266 89 ALRVGAEFL-HRILNYT----TFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 89 al~~~~~~l-~~l~~gd----~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~ 163 (218)
.+..++.+. ..+++|| +|++++|.|+.|...++..|+ +++.+++ + +.+.+|++.+++.+.. ++.+++.+
T Consensus 142 ~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~-~vv~v~~-~-~~~~~D~e~L~~~i~~---~t~~V~v~ 215 (481)
T PRK04366 142 ELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGF-KVVEIPS-N-EDGLVDLEALKAAVGE---DTAALMLT 215 (481)
T ss_pred HHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCC-EEEEeec-C-CCCCcCHHHHHhhccc---CCeEEEEe
Confidence 544322111 1146777 999999999999999999999 9999987 2 3467899999888753 34444445
Q ss_pred cCCCCcHH------HHHHHhhcCeEEEeeCCceee
Q psy6266 164 CAHNPTAQ------QVAHMVDKHHVYLLRSGRINM 192 (218)
Q Consensus 164 ~p~NPTG~------~l~~l~~~~~i~ii~D~r~~y 192 (218)
+|+ |||. +|+++|++++.+++.| .+.
T Consensus 216 ~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD--~a~ 247 (481)
T PRK04366 216 NPN-TLGLFERNILEIAEIVHEAGGLLYYD--GAN 247 (481)
T ss_pred CCC-CccccchHHHHHHHHHHHcCCEEEEE--ecC
Confidence 676 9997 5778899999999999 553
No 169
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.30 E-value=3.2e-11 Score=92.93 Aligned_cols=131 Identities=16% Similarity=0.095 Sum_probs=95.1
Q ss_pred cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHH-HHHHHhCCCcceeE
Q psy6266 53 LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHR-LVFLNAGFTEAREY 131 (218)
Q Consensus 53 ~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~-~~~~~~g~~~~~~~ 131 (218)
+.++++.+++++.. ..+++ +++.|+++|+.++++++ ..++++|++++|.|+++. ..++..|+ +++.+
T Consensus 2 ~~~~~~~l~~~~~~-------~~~~~--~~~~~~t~a~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~g~-~~~~v 69 (170)
T cd01494 2 LEELEEKLARLLQP-------GNDKA--VFVPSGTGANEAALLAL--LGPGDEVIVDANGHGSRYWVAAELAGA-KPVPV 69 (170)
T ss_pred HHHHHHHHHHHcCC-------CCCcE--EEeCCcHHHHHHHHHHh--CCCCCEEEEeecccceehhhHHHhcCC-EEEEe
Confidence 35788888877621 22343 47779999999999887 467999999999999998 78888898 88888
Q ss_pred eccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 132 RYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 132 ~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
+.........+++.+++... .++..+++.+.++||+|. ++.++|++++++++.| ++|..+....
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D--~a~~~~~~~~ 138 (170)
T cd01494 70 PVDDAGYGGLDVAILEELKA--KPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVD--AASAGGASPA 138 (170)
T ss_pred ccCCCCccchhhhhhhhccc--cCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEe--cccccccccc
Confidence 76432211123324433222 234455666778999996 7999999999999999 8888766653
No 170
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.30 E-value=8.2e-11 Score=103.39 Aligned_cols=155 Identities=11% Similarity=0.096 Sum_probs=106.7
Q ss_pred CCCCCccCchHHHHHHHHHhhcCCCCccCcCC---------CCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhH
Q psy6266 19 TEECKPWVLPVVRQAEKELAADDSLNHEYLPV---------LGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGA 89 (218)
Q Consensus 19 ~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~---------~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~a 89 (218)
|..+..++++.|.+|..+...+ ...|... .-+.++|+.+++++ + .++++| +.|.|++++
T Consensus 4 d~aa~~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-g------~~~~~i--~~t~~~t~a 71 (379)
T TIGR03402 4 DNNATTRVDPEVLEAMLPYFTE---YFGNPSSMHSFGGEVGKAVEEAREQVAKLL-G------AEPDEI--IFTSGGTES 71 (379)
T ss_pred CCcCCCCCCHHHHHHHHHHHHh---cCCCCCcccHHHHHHHHHHHHHHHHHHHHh-C------CCCCeE--EEeCcHHHH
Confidence 3344457788999998776543 1112111 12456777777665 3 234554 588999999
Q ss_pred HHHHHHHHHH-hcCCCeEEecCCCchhHHHHH---HHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccC
Q psy6266 90 LRVGAEFLHR-ILNYTTFYYSKPTWENHRLVF---LNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACA 165 (218)
Q Consensus 90 l~~~~~~l~~-l~~gd~V~i~~P~y~~y~~~~---~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p 165 (218)
+.+++.++.. ..+||+|++.+..|+++.... +..|. +++.++.. +.+.+|.+.+++.+. +++.+++.+.+
T Consensus 72 ~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~-~v~~v~~~--~~g~~~~~~l~~~i~---~~~~lv~i~~~ 145 (379)
T TIGR03402 72 DNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGY-KVTYLPVD--EEGRLDLEELRAAIT---DDTALVSVMWA 145 (379)
T ss_pred HHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCC-EEEEEccC--CCCcCCHHHHHHhcC---CCcEEEEEEcc
Confidence 9988776522 235789999998888765433 34588 88888762 234679999988885 34566666789
Q ss_pred CCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 166 HNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 166 ~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+||||. +|.++|++++++++.| .++.
T Consensus 146 ~n~tG~~~~~~~I~~l~~~~g~~vivD--~~~~ 176 (379)
T TIGR03402 146 NNETGTIFPIEEIGEIAKERGALFHTD--AVQA 176 (379)
T ss_pred cCCeeecccHHHHHHHHHHcCCEEEEE--Cccc
Confidence 999998 7999999999999999 5543
No 171
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.29 E-value=2.8e-11 Score=107.12 Aligned_cols=119 Identities=13% Similarity=0.113 Sum_probs=89.3
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHH----HHhCC
Q psy6266 50 VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVF----LNAGF 125 (218)
Q Consensus 50 ~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~----~~~g~ 125 (218)
..-...|+++++++..+ +. +++|.|+++|+.++++++ +.+||+|++++|+|+.....+ ...|.
T Consensus 52 npt~~~Le~~lA~leg~---------e~--ivvt~gg~~Ai~~~l~al--l~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi 118 (388)
T PRK08861 52 NPNRGLLEQTLSELESG---------KG--AVVTNCGTSALNLWVSAL--LGPDDLIVAPHDCYGGTYRLFNTRANKGDF 118 (388)
T ss_pred CchHHHHHHHHHHHhCC---------Ce--EEEECCHHHHHHHHHHHH--cCCCCEEEEcCCchHHHHHHHHHHHhcCCe
Confidence 34578888998887632 33 469999999999999877 679999999999999643333 22344
Q ss_pred CcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeecc
Q psy6266 126 TEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCG 194 (218)
Q Consensus 126 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~ 194 (218)
++..++ ..|++.+++.+. +++.+++..+|+||||. +|.++|+++++++|.| ++|..
T Consensus 119 -~v~~vd-------~~d~e~l~~~i~---~~tklV~lesP~NPtG~v~dl~~I~~la~~~gi~vIvD--ea~~~ 179 (388)
T PRK08861 119 -KVQFVD-------QSDAAALDAALA---KKPKLILLETPSNPLVRVVDIAELCQKAKAVGALVAVD--NTFLT 179 (388)
T ss_pred -EEEEEC-------CCCHHHHHHhcC---cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE--CCccc
Confidence 444442 137788877774 34556666799999998 7899999999999999 88874
No 172
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.29 E-value=3.4e-11 Score=106.52 Aligned_cols=117 Identities=13% Similarity=0.096 Sum_probs=88.9
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHH---hCCCc
Q psy6266 51 LGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLN---AGFTE 127 (218)
Q Consensus 51 ~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~---~g~~~ 127 (218)
....+|++.++++.-. +. ++++.+|+.|+..++.++ +.|||+|++++|.|+++...++. .|+ +
T Consensus 53 p~~~~lE~~lA~l~g~---------~~--~l~~~sG~~Ai~~~l~~l--l~~GD~Vlv~~~~y~~~~~~~~~~~~~g~-~ 118 (385)
T PRK08574 53 PTLRPLEEALAKLEGG---------VD--ALAFNSGMAAISTLFFSL--LKAGDRVVLPMEAYGTTLRLLKSLEKFGV-K 118 (385)
T ss_pred ccHHHHHHHHHHHhCC---------Cc--EEEeCCHHHHHHHHHHHH--hCCCCEEEEcCCCchhHHHHHHHhhccCc-E
Confidence 4678999999988743 22 357889999999888766 67999999999999998776644 354 4
Q ss_pred ceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 128 AREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 128 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+..+ . +|.+.+++.+.+ .++.+++.++|+||||. +|.++|+++++++|.| ++|.
T Consensus 119 v~~~---~-----~d~~~l~~~i~~--~~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~livD--~t~a 177 (385)
T PRK08574 119 VVLA---Y-----PSTEDIIEAIKE--GRTKLVFIETMTNPTLKVIDVPEVAKAAKELGAILVVD--NTFA 177 (385)
T ss_pred EEEE---C-----CCHHHHHHhcCc--cCceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEEE--CCCC
Confidence 4332 1 356777777753 14555666899999997 8999999999999999 7774
No 173
>PRK05939 hypothetical protein; Provisional
Probab=99.28 E-value=5.9e-11 Score=105.40 Aligned_cols=116 Identities=16% Similarity=0.169 Sum_probs=89.0
Q ss_pred CcH---HHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHH---HHHHhCC
Q psy6266 52 GLE---SFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRL---VFLNAGF 125 (218)
Q Consensus 52 G~~---~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~---~~~~~g~ 125 (218)
|.| .|.++++++.-+ . . .+.+.+|+.|+..++.++ +.|||+|+++++.|+++.. .++..|+
T Consensus 45 g~p~~~~lE~~la~leg~-~-------~---~v~~ssG~~Ai~~~l~al--l~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~ 111 (397)
T PRK05939 45 GTPTTAALEAKITKMEGG-V-------G---TVCFATGMAAIAAVFLTL--LRAGDHLVSSQFLFGNTNSLFGTLRGLGV 111 (397)
T ss_pred CCHHHHHHHHHHHHHhCC-C-------e---EEEeCCHHHHHHHHHHHH--cCCCCEEEECCCccccHHHHHHHHHhcCC
Confidence 777 888888887643 2 1 246666789999888776 6899999999999987654 4556687
Q ss_pred CcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 126 TEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 126 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+++.++. .|++.+++.+. +++++++..+|+||||. +|.++|++++++++.| ..|.
T Consensus 112 -~v~~v~~-------~d~e~l~~~l~---~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD--~t~a 171 (397)
T PRK05939 112 -EVTMVDA-------TDVQNVAAAIR---PNTRMVFVETIANPGTQVADLAGIGALCRERGLLYVVD--NTMT 171 (397)
T ss_pred -EEEEECC-------CCHHHHHHhCC---CCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEEEE--CCcc
Confidence 7777643 26788887774 45566666799999996 7899999999999999 7664
No 174
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.28 E-value=5.8e-11 Score=103.85 Aligned_cols=147 Identities=14% Similarity=0.036 Sum_probs=104.2
Q ss_pred ccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCC
Q psy6266 24 PWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNY 103 (218)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~g 103 (218)
..+++.+++|+.+-. . .....|. .-..++|+.+++++.. .++...+++|.++++++..++..+ +.+|
T Consensus 14 ~~~~~~~~~a~~~~~-~-~~~~~~~--~~~~~~~~~l~~l~~~-------~~~~~~i~~~~~gt~~l~~~~~~l--~~~~ 80 (368)
T PRK13479 14 LTTSRTVREAMLRDW-G-SWDDDFN--ALTASVRAKLVAIATG-------EEGYTCVPLQGSGTFSVEAAIGSL--VPRD 80 (368)
T ss_pred CCCCHHHHHHhCCCC-C-CCChHHH--HHHHHHHHHHHHHhCC-------CCCceEEEEcCCcHHHHHHHHHhc--cCCC
Confidence 456788887654322 1 1111233 2467788888876632 222223458889999999998877 5689
Q ss_pred CeEEecCCCchhHH--HHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHH
Q psy6266 104 TTFYYSKPTWENHR--LVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHM 176 (218)
Q Consensus 104 d~V~i~~P~y~~y~--~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l 176 (218)
|+|+++++++.... ..++..|+ +++.++.. ....+|++.+++.+++. ++..++..++++||||. +|.++
T Consensus 81 ~~vlv~~~~~~~~~~~~~~~~~g~-~~~~i~~~--~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~~~~i~~l 156 (368)
T PRK13479 81 GKVLVPDNGAYGARIAQIAEYLGI-AHVVLDTG--EDEPPDAAEVEAALAAD-PRITHVALVHCETTTGILNPLDEIAAV 156 (368)
T ss_pred CeEEEEeCCchHHHHHHHHHHcCC-cEEEEECC--CCCCCCHHHHHHHHHhC-CCCcEEEEEcccCccccccCHHHHHHH
Confidence 99999888776653 66788898 89988873 23568999999888643 33334445689999998 79999
Q ss_pred hhcCeEEEeeC
Q psy6266 177 VDKHHVYLLRS 187 (218)
Q Consensus 177 ~~~~~i~ii~D 187 (218)
|++++++++.|
T Consensus 157 ~~~~~~~livD 167 (368)
T PRK13479 157 AKRHGKRLIVD 167 (368)
T ss_pred HHHcCCEEEEE
Confidence 99999999999
No 175
>PRK06460 hypothetical protein; Provisional
Probab=99.27 E-value=3.5e-11 Score=106.13 Aligned_cols=120 Identities=11% Similarity=0.059 Sum_probs=85.9
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCc----hhHHHHHHHhCC
Q psy6266 50 VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTW----ENHRLVFLNAGF 125 (218)
Q Consensus 50 ~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y----~~y~~~~~~~g~ 125 (218)
.....+|+++++++... . . .+++.+|++|+..++.++ +.|||+|++++|.| ..|...++..|+
T Consensus 44 ~p~~~~L~~~lA~l~g~-~-------~---~v~~~sG~~ai~~~l~al--~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~ 110 (376)
T PRK06460 44 NPTVLELTKKIVELENA-E-------M---GVAFSSGMGAISTTALAL--LKPGNSVLVHRDMFGRSYRFFTDYLKNWGV 110 (376)
T ss_pred CccHHHHHHHHHHHhCC-C-------c---EEEeCCHHHHHHHHHHHH--hCCCCEEEEecCCcCcHHHHHHHHHHhhCc
Confidence 46789999999988643 1 1 135566688998887766 67999999998654 445567777888
Q ss_pred CcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 126 TEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 126 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
++..++.. +...++ .+. .+++.+++.++||||||. +|.++|+++++++|.| ++|...
T Consensus 111 -~v~~~~~~-------~~~~l~-~~~--~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~~vivD--ea~~~~ 172 (376)
T PRK06460 111 -NVDASNPG-------SDNIIE-KAK--SKRYDVVFVENITNPLLRVVDITELSKVCKENGSILIVD--ATFSTP 172 (376)
T ss_pred -EEEEECCC-------CHHHHH-Hhc--CCCceEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE--CCcCcc
Confidence 77666431 112232 232 244556666899999997 7999999999999999 888753
No 176
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.27 E-value=8.6e-11 Score=103.67 Aligned_cols=176 Identities=12% Similarity=0.077 Sum_probs=115.3
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
...|...||+..|.....-| +..+.|.+|.++.++. .. +....+..++++++++++.. ..+ .+++ +.
T Consensus 35 d~dg~~~iD~~~g~~~~~lG--~~~p~v~~a~~~~~~~--~~--~~~~~~~~~~~~~la~~l~~-~~~----~~~v--~~ 101 (396)
T PRK02627 35 DDDGKEYLDFLAGIAVNNLG--HCHPKLVEAIQEQAAK--LI--HTSNLYYIEPQEELAEKLVE-LSG----MDKV--FF 101 (396)
T ss_pred eCCCCEEEECCccHHhccCC--CCCHHHHHHHHHHHhh--cc--ccccccCCHHHHHHHHHHHh-hcC----CCEE--EE
Confidence 35688889998886544445 2357788887776643 11 22233457888999988865 322 2454 69
Q ss_pred eccChhHHHHHHHHHHHhcC-----CCeEEecCCCchhHHHHHHHhCCCccee-EeccCCcCccc------cHHHHHHHH
Q psy6266 83 TLSGTGALRVGAEFLHRILN-----YTTFYYSKPTWENHRLVFLNAGFTEARE-YRYWNPEKRAV------DFTGMYEDL 150 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~-----gd~V~i~~P~y~~y~~~~~~~g~~~~~~-~~~~~~~~~~~------d~~~~~~~l 150 (218)
|.||++|+.++++++..... .++|++++|+|..+.......+. .+.. .... .-..++ |++.+++.+
T Consensus 102 ~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~d~~~l~~~i 179 (396)
T PRK02627 102 CNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATG-QPKYQEGFE-PLVEGFIYVPFNDIEALKAAI 179 (396)
T ss_pred CCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcC-CccccccCC-CCCCCceEeCCCCHHHHHHhc
Confidence 99999999999886633211 17899999999887655544443 2211 1110 000122 778888777
Q ss_pred hcCCCCcEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 151 VNAPDNSVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 151 ~~~~~~~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
. ++..+++..+++||||. +|.++|++|++++|.| |+|.++.+.
T Consensus 180 ~---~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~D--E~~~g~g~~ 231 (396)
T PRK02627 180 T---DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILD--EVQTGMGRT 231 (396)
T ss_pred C---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe--chhcCCCcc
Confidence 3 33444444567999983 7999999999999999 999987543
No 177
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.27 E-value=1.1e-10 Score=101.69 Aligned_cols=152 Identities=13% Similarity=0.110 Sum_probs=104.2
Q ss_pred CCccCchHHHHHHHHHhhc-CCCCccCcCCCC------cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHH
Q psy6266 22 CKPWVLPVVRQAEKELAAD-DSLNHEYLPVLG------LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGA 94 (218)
Q Consensus 22 ~~~~~~~~v~~a~~~~~~~-~~~~~~Y~~~~G------~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~ 94 (218)
+..++++.|++|..+.+.. ...........| ++++|+.+++++ + .++++| +.|.|+++++.+++
T Consensus 6 ~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-g------~~~~~v--~~~~g~t~a~~~~l 76 (353)
T TIGR03235 6 ATTPIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEAL-G------ADTEEV--IFTSGATESNNLAI 76 (353)
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh-C------CCCCeE--EEeCCHHHHHHHHH
Confidence 3346788999998776532 111111111112 467888888765 3 234454 58899999999888
Q ss_pred HHHHHh--cCC-CeEEecCCCchhHHH---HHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCC
Q psy6266 95 EFLHRI--LNY-TTFYYSKPTWENHRL---VFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNP 168 (218)
Q Consensus 95 ~~l~~l--~~g-d~V~i~~P~y~~y~~---~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NP 168 (218)
.++... .+| +.|++.+..++++.. .++..|+ +++.++.. +.+.+|++.+++.+. +++.+++.+.++||
T Consensus 77 ~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~-~v~~v~~~--~~~~~d~~~l~~~l~---~~~~lv~~~~~~n~ 150 (353)
T TIGR03235 77 LGLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGF-TVTYLPVD--ESGRIDVDELADAIR---PDTLLVSIMHVNNE 150 (353)
T ss_pred HHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCC-EEEEEccC--CCCcCCHHHHHHhCC---CCCEEEEEEcccCC
Confidence 766321 256 788888777776543 3455688 88888763 245689999988874 34556666789999
Q ss_pred cHH-----HHHHHhhcCeEEEeeCC
Q psy6266 169 TAQ-----QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 169 TG~-----~l~~l~~~~~i~ii~D~ 188 (218)
||. +|.++|++++++++.|+
T Consensus 151 tG~~~~~~~I~~l~~~~~~~~ivD~ 175 (353)
T TIGR03235 151 TGSIQPIREIAEVLEAHEAFFHVDA 175 (353)
T ss_pred ceeccCHHHHHHHHHHcCCEEEEEc
Confidence 998 79999999999999994
No 178
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.27 E-value=6.2e-11 Score=105.49 Aligned_cols=123 Identities=14% Similarity=0.140 Sum_probs=90.3
Q ss_pred cCcC--CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHH----HH
Q psy6266 46 EYLP--VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHR----LV 119 (218)
Q Consensus 46 ~Y~~--~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~----~~ 119 (218)
.|.- ..-..+|+++++++.-. . . .+++.+|+.|+.+++.++ +.|||+|+++.|.|+... ..
T Consensus 58 ~y~r~~~p~~~~le~~lA~l~g~-~--------~--~i~~~sG~~Al~~~l~~l--l~~Gd~Viv~~~~y~~t~~~~~~~ 124 (403)
T PRK07503 58 FYSRISNPTLALLEQRMASLEGG-E--------A--AVALASGMGAITATLWTL--LRPGDEVIVDQTLYGCTFAFLHHG 124 (403)
T ss_pred eeeCCCCchHHHHHHHHHHHhCC-C--------c--EEEEcCHHHHHHHHHHHH--cCCCCEEEEccCccchHHHHHHHH
Confidence 3553 33478999999877533 1 1 247778889999888766 689999999999887533 33
Q ss_pred HHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeecc
Q psy6266 120 FLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCG 194 (218)
Q Consensus 120 ~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~ 194 (218)
++..|+ ++..++. .|++.+++.+.. ++.+++..+|+||||. +|.++|+++++++|.| ++|..
T Consensus 125 ~~~~G~-~v~~vd~-------~d~~~l~~~i~~---~tklV~le~p~NPtG~~~di~~I~~la~~~gi~lIvD--~a~a~ 191 (403)
T PRK07503 125 LGEFGV-TVRHVDL-------TDPAALKAAISD---KTRMVYFETPANPNMRLVDIAAVAEIAHGAGAKVVVD--NTYCT 191 (403)
T ss_pred HhhCCE-EEEEeCC-------CCHHHHHHhcCc---cCcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCEEEEE--CCCcc
Confidence 455677 7766643 256777777743 3445555789999998 8999999999999999 88864
No 179
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.27 E-value=8e-11 Score=105.17 Aligned_cols=177 Identities=12% Similarity=-0.014 Sum_probs=119.6
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ..+|.|.+|.++.+++ ..+.+.++.|.++|++++++++.+ . ++| +.|
T Consensus 45 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~q~~~--~~~~~~~~~~~~~lae~l~~~~~~-~-------~~v--~~~ 110 (423)
T TIGR00713 45 VDGNEYIDYVLSWGPLILG--HAHPRVVEAVKEALER--GTSYGAPTEAEILLAKEIISRVPS-V-------EMV--RFV 110 (423)
T ss_pred CCCCEEEEccccccccccC--CCCHHHHHHHHHHHHh--CCcCCCCCHHHHHHHHHHHHhCCc-c-------cEE--EEe
Confidence 4678888988886433445 5678888887776654 334345788999999999987643 1 344 589
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHh---CCCcceeEeccCC-------cCc---cccHHHHHHHH
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNA---GFTEAREYRYWNP-------EKR---AVDFTGMYEDL 150 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~---g~~~~~~~~~~~~-------~~~---~~d~~~~~~~l 150 (218)
.||++|+..++++.+.....++|+..+|+|..+...+... +. ....++.... ... ..|++.+++.+
T Consensus 111 ~sGseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i 189 (423)
T TIGR00713 111 NSGTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGA-ATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVF 189 (423)
T ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcc-cccCCCCCCCCCcccccceEEeCCCCHHHHHHHH
Confidence 9999999998886544445799999999999986433321 11 1111111100 000 01678888888
Q ss_pred hcCCCC-cEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 151 VNAPDN-SVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 151 ~~~~~~-~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
.+...+ ..+++.+.++| ||. +|.++|++|++++|.| |+|.++.++
T Consensus 190 ~~~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~D--Ev~~g~r~g 244 (423)
T TIGR00713 190 EEYGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFD--EVMTGFRVA 244 (423)
T ss_pred HHcCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEE--ccccccccC
Confidence 643223 34555578888 453 7999999999999999 999998654
No 180
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.27 E-value=7.3e-11 Score=104.86 Aligned_cols=119 Identities=14% Similarity=0.154 Sum_probs=88.9
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHH----HhCCC
Q psy6266 51 LGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFL----NAGFT 126 (218)
Q Consensus 51 ~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~----~~g~~ 126 (218)
.-..+|++.++++.-. . . .+++.+|+.|+..++.++ +.|||+|++++|.|+.+...++ ..|+
T Consensus 65 p~~~~Le~~lA~l~G~-~--------~--~~~~~sG~~Ai~~~l~~~--l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~- 130 (398)
T PRK07504 65 PTVDMFEKRMCALEGA-E--------D--ARATASGMAAVTAAILCQ--VKAGDHVVAARALFGSCRYVVETLLPRYGI- 130 (398)
T ss_pred chHHHHHHHHHHHhCC-C--------e--eeEecCHHHHHHHHHHHH--hCCCCEEEEcCCchhHHHHHHHHHHhhcCe-
Confidence 3468899999987532 1 1 135677888887766554 6799999999999998765543 3466
Q ss_pred cceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 127 EAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 127 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
+++.++ .+|++.+++++. +++.+++..+|+||||. +|.++|+++++++|.| ++|...
T Consensus 131 ~v~~vd-------~~d~e~l~~ai~---~~tklV~lesp~NptG~v~dl~~I~~la~~~gi~lvvD--~a~a~~ 192 (398)
T PRK07504 131 ESTLVD-------GLDLDNWEKAVR---PNTKVFFLESPTNPTLEVIDIAAVAKIANQAGAKLVVD--NVFATP 192 (398)
T ss_pred EEEEEC-------CCCHHHHHHhcC---cCceEEEEECCCCCCcEecCHHHHHHHHHHcCCEEEEE--CCcccc
Confidence 555552 257888888774 45566666899999997 8999999999999999 888743
No 181
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.27 E-value=3.8e-11 Score=105.53 Aligned_cols=116 Identities=16% Similarity=0.171 Sum_probs=87.7
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhH----HHHHHHhCCC
Q psy6266 51 LGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENH----RLVFLNAGFT 126 (218)
Q Consensus 51 ~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y----~~~~~~~g~~ 126 (218)
.-..+|+++++++... . . .+++.||++|+.+++. + +.+||+|++++|.|+.. ...++..|+
T Consensus 52 pt~~~le~~la~l~g~-~--------~--~~~~~sG~~ai~~~~~-l--l~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~- 116 (366)
T PRK08247 52 PTRGVLEQAIADLEGG-D--------Q--GFACSSGMAAIQLVMS-L--FRSGDELIVSSDLYGGTYRLFEEHWKKWNV- 116 (366)
T ss_pred chHHHHHHHHHHHhCC-C--------c--EEEEcCHHHHHHHHHH-H--hCCCCEEEEecCCcCcHHHHHHHHhhccCc-
Confidence 3567899999887643 1 1 2578888999987653 3 57999999999999974 334455788
Q ss_pred cceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 127 EAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 127 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+++.++. .|++.+++.+. +++.+++.++|+||||. +|.++|+++++++|.| ++|.
T Consensus 117 ~v~~vd~-------~d~~~l~~~i~---~~tklv~le~P~NP~~~~~dl~~I~~la~~~g~~lIvD--~t~~ 176 (366)
T PRK08247 117 RFVYVNT-------ASLKAIEQAIT---PNTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVD--NTFY 176 (366)
T ss_pred eEEEECC-------CCHHHHHHhcc---cCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE--CCCc
Confidence 7777643 26788887775 34556666799999986 7899999999999999 8884
No 182
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.23 E-value=6.4e-11 Score=104.95 Aligned_cols=100 Identities=14% Similarity=0.100 Sum_probs=77.6
Q ss_pred EEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHH----HHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCC
Q psy6266 81 VQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLV----FLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDN 156 (218)
Q Consensus 81 ~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~----~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 156 (218)
+.+.+|++|+..++.++ ++|||+|++++|.|+++... ++..|. ++..++. + +.+.++++++ ++
T Consensus 83 v~~sSG~aAi~~~l~al--l~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi-~v~~vd~---~----~~e~l~~al~---~~ 149 (395)
T PRK05967 83 ILVPSGLAAVTVPFLGF--LSPGDHALIVDSVYYPTRHFCDTMLKRLGV-EVEYYDP---E----IGAGIAKLMR---PN 149 (395)
T ss_pred EEECcHHHHHHHHHHHh--cCCCCEEEEccCCcHHHHHHHHHHHHhcCe-EEEEeCC---C----CHHHHHHhcC---cC
Confidence 46677899999988776 78999999999999998753 466677 6655532 1 3356777664 44
Q ss_pred cEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 157 SVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 157 ~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
+++++..+|+|||+. +|+++|++++++++.| +.|...
T Consensus 150 TklV~lesPsNP~l~v~dl~~I~~la~~~g~~vvVD--~t~a~p 191 (395)
T PRK05967 150 TKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAIVMMD--NTWATP 191 (395)
T ss_pred ceEEEEECCCCCCCcHHHHHHHHHHHHHhCCEEEEE--CCccCc
Confidence 667777899999997 7899999999999999 887653
No 183
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.23 E-value=8.5e-11 Score=105.26 Aligned_cols=116 Identities=12% Similarity=0.154 Sum_probs=89.9
Q ss_pred cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHH----HHHhCCCcc
Q psy6266 53 LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLV----FLNAGFTEA 128 (218)
Q Consensus 53 ~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~----~~~~g~~~~ 128 (218)
...|.+.++++.-+ .+ ++.|.+|+.|+.+++.++ +.+||+|++++++|.+-... +...|+ ++
T Consensus 63 v~~lE~~la~leg~-~~----------av~~~SG~aAi~~al~al--l~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi-~v 128 (432)
T PRK06702 63 LAAFEQKLAELEGG-VG----------AVATASGQAAIMLAVLNI--CSSGDHLLCSSTVYGGTFNLFGVSLRKLGI-DV 128 (432)
T ss_pred HHHHHHHHHHHhCC-Cc----------EEEECCHHHHHHHHHHHh--cCCCCEEEECCCchHHHHHHHHHHHHHCCC-EE
Confidence 57777888877643 21 358999999999988876 68999999999999855444 567788 77
Q ss_pred eeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 129 REYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 129 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
..+.. .+|.+.++++|+ +++++++..+|+|||+. +|.++|++|++++|.| ..|.
T Consensus 129 ~~vd~------~~d~~~l~~~I~---~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~livD--~T~~ 187 (432)
T PRK06702 129 TFFNP------NLTADEIVALAN---DKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVD--NTLA 187 (432)
T ss_pred EEECC------CCCHHHHHHhCC---cCCeEEEEEcCCCccccccCHHHHHHHHHHcCCEEEEE--CCCC
Confidence 77632 357788888885 34555556789999986 8999999999999999 6653
No 184
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.23 E-value=1.2e-10 Score=103.12 Aligned_cols=181 Identities=14% Similarity=0.063 Sum_probs=115.4
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ..++.|.+|..+.++. ...|....|..++...+++.+.. ..+ ...+++ +.+
T Consensus 33 ~dG~~~id~~~~~~~~~lG--~~~p~v~~a~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~-~~~--~~~~~v--~~~ 102 (413)
T cd00610 33 VDGNRYLDFLSGIGVLNLG--HNHPEVVEALKEQLAK---LTHFSLGFFYNEPAVELAELLLA-LTP--EGLDKV--FFV 102 (413)
T ss_pred CCCCEEEEcCccHHhhccC--CCCHHHHHHHHHHHHh---CcCccCcccCCHHHHHHHHHHHH-hCC--CCCCEE--EEc
Confidence 4678889998764223455 3577888887776643 23454433455555556655543 221 123554 589
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCC------------cceeEeccCC----cCccccHHHHH
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFT------------EAREYRYWNP----EKRAVDFTGMY 147 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~------------~~~~~~~~~~----~~~~~d~~~~~ 147 (218)
.|+++|+..++.++..+.+++.|++.+|+|..+.......+.. +++.+|.... +.+..|++.++
T Consensus 103 ~sgsea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 182 (413)
T cd00610 103 NSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALE 182 (413)
T ss_pred CcHHHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHH
Confidence 9999999998887654567999999999999866544433220 1334433100 11234778888
Q ss_pred HHHhcCCCCcEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccCC
Q psy6266 148 EDLVNAPDNSVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGLT 196 (218)
Q Consensus 148 ~~l~~~~~~~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l~ 196 (218)
+.+++...+..+++....+|+||. +|.++|++|++++|.| |+|.++.
T Consensus 183 ~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~D--ev~~g~g 238 (413)
T cd00610 183 EALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIAD--EVQTGFG 238 (413)
T ss_pred HHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe--ccccCCC
Confidence 887653223444554455666675 6889999999999999 9999863
No 185
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.22 E-value=1.6e-10 Score=102.87 Aligned_cols=121 Identities=12% Similarity=0.027 Sum_probs=92.0
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecC----CCchhHHHHHHHhC
Q psy6266 49 PVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSK----PTWENHRLVFLNAG 124 (218)
Q Consensus 49 ~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~----P~y~~y~~~~~~~g 124 (218)
+..-..+|.++++++..+ +. ++.+.+|+.|+..++.++ +.+||+|++++ |+|..+...++..|
T Consensus 68 ~~p~~~~le~~lA~l~g~---------~~--al~~~sG~~Ai~~~l~al--l~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G 134 (403)
T PRK07810 68 GNPTVSMFEERLRLIEGA---------EA--CFATASGMSAVFTALGAL--LGAGDRLVAARSLFGSCFVVCNEILPRWG 134 (403)
T ss_pred CCchHHHHHHHHHHHhCC---------Cc--EEEECChHHHHHHHHHHH--hCCCCEEEEccCCcchHHHHHHHHHHHcC
Confidence 444578899999887643 12 358889999998887766 67999999887 44555556677788
Q ss_pred CCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 125 FTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 125 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
+ +++.++. .|++.+++++. +++.+++..+|+||||. +|.++|+++++++|.| ++|...
T Consensus 135 ~-~v~~vd~-------~d~~~l~~ai~---~~tklV~~esp~Nptg~v~dl~~I~~la~~~g~~vivD--~a~a~~ 197 (403)
T PRK07810 135 V-ETVFVDG-------EDLSQWEEALS---VPTQAVFFETPSNPMQSLVDIAAVSELAHAAGAKVVLD--NVFATP 197 (403)
T ss_pred c-EEEEECC-------CCHHHHHHhcC---cCceEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE--CCCCcc
Confidence 8 7877742 27788888775 34556666799999996 8999999999999999 888743
No 186
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.21 E-value=2.4e-10 Score=100.99 Aligned_cols=119 Identities=14% Similarity=0.176 Sum_probs=89.2
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhH----HHHHHHhCCC
Q psy6266 51 LGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENH----RLVFLNAGFT 126 (218)
Q Consensus 51 ~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y----~~~~~~~g~~ 126 (218)
.-..+|++.++++. + . +. ++.+.+|+.|+.+++.++ +.+||+|+++++.|+.. ...++..|+
T Consensus 54 p~~~~le~~la~l~-g-~-------~~--~~~~~sG~~Ai~~al~al--~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~- 119 (380)
T TIGR01325 54 PTVAAFEERIAALE-G-A-------ER--AVATATGMSAIQAALMTL--LQAGDHVVASRSLFGSTVGFISEILPRFGI- 119 (380)
T ss_pred chHHHHHHHHHHHh-C-C-------Cc--EEEECCHHHHHHHHHHHH--hCCCCEEEEecCCcchHHHHHHHHHHHhCC-
Confidence 34788999998865 3 1 22 257899999999888776 67999999999988753 335566787
Q ss_pred cceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 127 EAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 127 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
++..++. .|++.+++.+. +++.+++..+|+||||. +|.++|+++++++|.| ++|...
T Consensus 120 ~v~~v~~-------~d~~~l~~~i~---~~tklV~le~p~np~g~~~dl~~I~~la~~~gi~livD--~a~~~~ 181 (380)
T TIGR01325 120 EVSFVDP-------TDLNAWEAAVK---PNTKLVFVETPSNPLGELVDIAALAELAHAIGALLVVD--NVFATP 181 (380)
T ss_pred EEEEECC-------CCHHHHHHhcC---CCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEE--CCCccc
Confidence 7766643 15677777664 34555666789999997 7999999999999999 888643
No 187
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.20 E-value=1.6e-10 Score=101.93 Aligned_cols=122 Identities=12% Similarity=0.091 Sum_probs=89.9
Q ss_pred ccCcCCCCcH---HHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHH-
Q psy6266 45 HEYLPVLGLE---SFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVF- 120 (218)
Q Consensus 45 ~~Y~~~~G~~---~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~- 120 (218)
..|+- .|.| .|.++++++.-+ +. +++|.|+++|+..++.++ +.|||+|++++|.|++....+
T Consensus 42 ~~Y~r-~gnPt~~~lE~~lA~l~g~---------~~--~~~~~sG~~Ai~~al~al--l~~GD~Vl~~~~~y~~t~~~~~ 107 (377)
T TIGR01324 42 LTYGR-RGTLTHFALQDAMCELEGG---------AG--CYLYPSGLAAVTNSILAF--VKAGDHVLMVDSAYEPTRYFCD 107 (377)
T ss_pred CcccC-CCCccHHHHHHHHHHHhCC---------Cc--EEEECcHHHHHHHHHHHh--cCCCCEEEEcCCCcHHHHHHHH
Confidence 45774 5764 899999977633 22 358899999999988877 689999999999998765433
Q ss_pred ---HHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceee
Q psy6266 121 ---LNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINM 192 (218)
Q Consensus 121 ---~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y 192 (218)
+..|. ++..++ .. +.+.+++.+. +++++++..+|+||||. +|.++|+++++++|.| ++|
T Consensus 108 ~~~~~~gi-~v~~~d---~~----~~e~l~~~i~---~~tklV~lesp~Np~g~~~dl~~I~~la~~~g~~livD--~t~ 174 (377)
T TIGR01324 108 IVLKRMGV-DITYYD---PL----IGEDIATLIQ---PNTKVLFLEAPSSITFEIQDIPAIAKAARNPGIVIMID--NTW 174 (377)
T ss_pred HHHHhcCc-EEEEEC---CC----CHHHHHHhcC---CCceEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE--CCC
Confidence 44566 554442 11 1155555553 45667777899999997 7899999999999999 787
Q ss_pred c
Q psy6266 193 C 193 (218)
Q Consensus 193 ~ 193 (218)
.
T Consensus 175 a 175 (377)
T TIGR01324 175 A 175 (377)
T ss_pred c
Confidence 5
No 188
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.20 E-value=2.9e-10 Score=100.37 Aligned_cols=175 Identities=16% Similarity=0.114 Sum_probs=111.1
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-|. ..|.|.+|.++.++. ..+ ... ...-+....+++++.. .. ..+++ +.+
T Consensus 28 ~dG~~~lD~~~g~~~~~lGh--~~p~v~~a~~~~~~~--~~~-~~~-~~~~~~~~~la~~l~~-~~----~~~~v--~~~ 94 (389)
T PRK01278 28 EDGERYLDFASGIAVNSLGH--AHPHLVEALKEQAEK--LWH-VSN-LYRIPEQERLAERLVE-NS----FADKV--FFT 94 (389)
T ss_pred CCCCEEEECCccHhhccCCC--CCHHHHHHHHHHHHh--cCc-ccc-ccCChHHHHHHHHHHh-hC----CCCEE--EEc
Confidence 46777888877654344563 567888777665542 111 111 1122333445555543 21 12444 588
Q ss_pred ccChhHHHHHHHHHHH--hcCCC----eEEecCCCchhHHHHHHHhCCCcceeEeccCC--cCcc----ccHHHHHHHHh
Q psy6266 84 LSGTGALRVGAEFLHR--ILNYT----TFYYSKPTWENHRLVFLNAGFTEAREYRYWNP--EKRA----VDFTGMYEDLV 151 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~--l~~gd----~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~--~~~~----~d~~~~~~~l~ 151 (218)
.+|++|+..++++... .++|| +|++.+|+|+.+.......+. .+.....+.+ +.+. .|++.+++.+.
T Consensus 95 ~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 173 (389)
T PRK01278 95 NSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGG-QEKYLEGFGPLVPGFDQVPFGDIEALKAAIT 173 (389)
T ss_pred CCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccC-ChhhcccCCCCCCCceEeCCCCHHHHHHhhC
Confidence 9999999998886543 34677 999999999998876666655 4433221111 1111 37888888774
Q ss_pred cCCCCcEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccCCC
Q psy6266 152 NAPDNSVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGLTT 197 (218)
Q Consensus 152 ~~~~~~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l~~ 197 (218)
. +..+++....+||+|. +|.++|++|++++|.| |+|.++.+
T Consensus 174 ~---~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~D--Ev~~g~g~ 223 (389)
T PRK01278 174 P---NTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFD--EVQCGMGR 223 (389)
T ss_pred C---CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe--ccccCCCc
Confidence 2 3445555567888882 7999999999999999 99998754
No 189
>PLN02509 cystathionine beta-lyase
Probab=99.20 E-value=1.3e-10 Score=104.86 Aligned_cols=125 Identities=15% Similarity=0.173 Sum_probs=90.6
Q ss_pred CccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHH----
Q psy6266 44 NHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLV---- 119 (218)
Q Consensus 44 ~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~---- 119 (218)
.+.|+.. |.| .++++.+++.. ..+ .+. .+.+.+++.|+.+++. + +.+||+|++++|.|+.+...
T Consensus 124 ~~~Y~r~-gnp-t~~aLE~~lA~-leg----~e~--ai~~~SG~aAi~~il~-l--l~~GD~VI~~~~~y~~t~~ll~~~ 191 (464)
T PLN02509 124 PYDYTRS-GNP-TRDALESLLAK-LDK----ADR--AFCFTSGMAALSAVTH-L--IKNGEEIVAGDDVYGGSDRLLSQV 191 (464)
T ss_pred CCccCCC-CCH-HHHHHHHHHHH-HhC----CCE--EEEeCcHHHHHHHHHH-H--hCCCCEEEEcCCchhhHHHHHHHH
Confidence 4678877 876 57777777644 211 122 3466777888866553 3 57999999999999998744
Q ss_pred HHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 120 FLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 120 ~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+...|+ +++.++. .|++.+++.+. +++++++..+|+||||. +|.++|++|++++|.| ++|.
T Consensus 192 l~~~G~-~v~~vd~-------~d~e~l~~ai~---~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD--~A~a 257 (464)
T PLN02509 192 VPRSGV-VVKRVNT-------TNLDEVAAAIG---PQTKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVD--NSIM 257 (464)
T ss_pred HHHCCe-EEEEeCC-------CCHHHHHHhCC---cCCeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEE--CCcc
Confidence 345677 6766632 25677777774 45566666899999997 7889999999999999 7764
No 190
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.19 E-value=6.2e-10 Score=97.16 Aligned_cols=152 Identities=14% Similarity=0.120 Sum_probs=104.8
Q ss_pred cCchHHHHHHHHHhhcCCCCccCcCCCCc----HHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHh
Q psy6266 25 WVLPVVRQAEKELAADDSLNHEYLPVLGL----ESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRI 100 (218)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~----~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l 100 (218)
++.+.+.+++.+..+.......+. .|. .++|+.+++++ + .+++.+ +.|.|++++...++.++...
T Consensus 31 ~~~~~~~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~-g------~~~~~~--~~~~ggt~a~~~a~~~~~~~ 99 (371)
T PRK13520 31 EPHPIARKAHEMFLETNLGDPGLF--PGTAKLEEEAVEMLGELL-H------LPDAYG--YITSGGTEANIQAVRAARNL 99 (371)
T ss_pred CchHHHHHHHHHHHhcCCCCcccC--ccHHHHHHHHHHHHHHHh-C------CCCCCe--EEecCcHHHHHHHHHHHHhh
Confidence 456666777766554311122211 233 35666666554 3 222333 57899999988887665332
Q ss_pred --cCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HH
Q psy6266 101 --LNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QV 173 (218)
Q Consensus 101 --~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l 173 (218)
.++|+|+++++.++++...++..|+ +++.+|.. +.+.+|++.+++.+.+ ++..++...++||||. +|
T Consensus 100 ~~~~~~~vl~~~~~h~s~~~~~~~~g~-~~~~v~~~--~~~~~d~~~l~~~i~~---~~~~vi~~~~~~~tG~~~~l~~I 173 (371)
T PRK13520 100 AKAEKPNIVVPESAHFSFDKAADMLGV-ELRRAPLD--DDYRVDVKAVEDLIDD---NTIGIVGIAGTTELGQVDPIPEL 173 (371)
T ss_pred ccCCCceEEecCcchHHHHHHHHHcCc-eEEEecCC--CCCcCCHHHHHHHHhh---CCEEEEEEcCCcCCcccCCHHHH
Confidence 2579999999999999988888898 88888762 2356799999998863 2333333457899998 89
Q ss_pred HHHhhcCeEEEeeCCceeeccC
Q psy6266 174 AHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 174 ~~l~~~~~i~ii~D~r~~y~~l 195 (218)
.++|++++++++.| ++|.++
T Consensus 174 ~~l~~~~g~~livD--~a~~~~ 193 (371)
T PRK13520 174 SKIALENGIFLHVD--AAFGGF 193 (371)
T ss_pred HHHHHHcCCCEEEE--ecchhH
Confidence 99999999999999 888754
No 191
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.19 E-value=4.8e-10 Score=99.75 Aligned_cols=163 Identities=12% Similarity=-0.008 Sum_probs=104.6
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCC----C-ccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEE
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSL----N-HEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFG 80 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~----~-~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~ 80 (218)
|.+.++++--.| .| +..++.|++|..+.++..+. . ..|....-..+|++++++++-. ++. +
T Consensus 45 ~~~~~~~~sn~y---l~-l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~--------~~~--i 110 (410)
T PRK13392 45 PRRVTIWCSNDY---LG-MGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGK--------ESA--L 110 (410)
T ss_pred CceEEEEECCCc---cC-CCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCC--------CCE--E
Confidence 345667766544 22 45678888887776643110 0 1122222467888888887622 122 2
Q ss_pred EEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC-CCCcEE
Q psy6266 81 VQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA-PDNSVI 159 (218)
Q Consensus 81 ~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~i 159 (218)
+.+.| +.|...++.++..+.+||.|+++.+.+..+...++..|+ ++..++. .|++.+.+.+++. ++++.+
T Consensus 111 ~~~sG-~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~-~~~~~~~-------~d~~~l~~~l~~~~~~~t~~ 181 (410)
T PRK13392 111 LFTSG-YVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGA-EKQVFRH-------NDLADLEEQLASVDPDRPKL 181 (410)
T ss_pred EECcH-HHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCC-eEEEEeC-------CCHHHHHHHHHhccCCCCEE
Confidence 35555 556555555443234899888887788877777777887 6655421 1445555555543 245666
Q ss_pred EEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 160 ILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 160 il~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
++.++|+||||. +|.++|+++++++|.| ++|.
T Consensus 182 v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livD--ea~~ 218 (410)
T PRK13392 182 IAFESVYSMDGDIAPIEAICDLADRYNALTYVD--EVHA 218 (410)
T ss_pred EEEeCCCCCCcccccHHHHHHHHHHcCCEEEEE--CCcc
Confidence 777899999996 7999999999999999 9988
No 192
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.19 E-value=4.9e-10 Score=99.15 Aligned_cols=123 Identities=11% Similarity=0.086 Sum_probs=87.3
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcc
Q psy6266 49 PVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEA 128 (218)
Q Consensus 49 ~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~ 128 (218)
+..-..+|++.++++.-. . + .+.+.+|+.|+..++.++ +.|||+|++++|.|+.....+..... ..
T Consensus 59 ~~pt~~~Le~~lA~l~G~-~-------~---al~~~sG~~Ai~~~l~al--~~~Gd~Vv~~~~~y~~~~~~~~~~~~-~~ 124 (386)
T PRK06767 59 GNPTVKLFEERMAVLEGG-E-------E---ALAFGSGMAAISATLIGF--LKAGDHIICSNGLYGCTYGFLEVLEE-KF 124 (386)
T ss_pred CCcchHHHHHHHHHHhCC-C-------c---EEEECCHHHHHHHHHHHH--hCCCCEEEEcCCcHHHHHHHHHHHHh-hc
Confidence 445578999999987633 1 2 246677788888877766 67999999999999987766554422 11
Q ss_pred -eeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeecc
Q psy6266 129 -REYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCG 194 (218)
Q Consensus 129 -~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~ 194 (218)
+.+.... ..|++.+++++. +++.+++..+|+||||. +|.++|++++++++.| ++|..
T Consensus 125 gi~~~~~~----~~d~~~l~~~i~---~~tklV~lesp~NptG~v~dl~~I~~la~~~g~~vivD--~a~a~ 187 (386)
T PRK06767 125 MITHSFCD----METEADIENKIR---PNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVD--NTFCS 187 (386)
T ss_pred CeEEEEeC----CCCHHHHHHhhC---cCceEEEEeCCCCCCceecCHHHHHHHHHHcCCEEEEE--CCCcc
Confidence 1111111 236777877774 34556666799999997 8999999999999999 88763
No 193
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.19 E-value=1.7e-10 Score=103.51 Aligned_cols=115 Identities=12% Similarity=0.126 Sum_probs=86.8
Q ss_pred cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHH----HHHHHhCCCcc
Q psy6266 53 LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHR----LVFLNAGFTEA 128 (218)
Q Consensus 53 ~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~----~~~~~~g~~~~ 128 (218)
...|.++++++..+ . . .++|.+|++|+..++..+ +.+||+|++++|.|+.-. ..++..|+ ++
T Consensus 66 ~~~Le~~lA~leg~-~--------~--al~~~sG~~Ai~~al~~l--l~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv-~v 131 (431)
T PRK08248 66 TDVFEKRIAALEGG-I--------G--ALAVSSGQAAITYSILNI--ASAGDEIVSSSSLYGGTYNLFAHTLPKLGI-TV 131 (431)
T ss_pred HHHHHHHHHHHhCC-C--------c--EEEECCHHHHHHHHHHHH--hCCCCEEEEccCchhhHHHHHHHHHHhCCE-EE
Confidence 56777777776533 1 1 358999999999888766 679999999999886532 34566788 78
Q ss_pred eeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 129 REYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 129 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+.++. .|++.+++++.. ++.+++..+|+||||. +|.++|+++++++|.| .+|.
T Consensus 132 ~~vd~-------~d~e~l~~ai~~---~tklV~l~sp~NPtG~v~di~~I~~la~~~gi~vIvD--~t~a 189 (431)
T PRK08248 132 KFVDP-------SDPENFEAAITD---KTKALFAETIGNPKGDVLDIEAVAAIAHEHGIPLIVD--NTFA 189 (431)
T ss_pred EEECC-------CCHHHHHHhcCC---CCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEe--CCCC
Confidence 77754 267788877753 3444555689999998 7999999999999999 7765
No 194
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.18 E-value=1.4e-10 Score=102.76 Aligned_cols=116 Identities=13% Similarity=0.118 Sum_probs=86.9
Q ss_pred cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHH----HHHhCCCcc
Q psy6266 53 LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLV----FLNAGFTEA 128 (218)
Q Consensus 53 ~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~----~~~~g~~~~ 128 (218)
..+|+++++++... . . .+++.+|+.|+.+++.++ +.|||+|++++|.|+..... +...|+ ++
T Consensus 61 ~~~le~~lA~l~g~-~--------~--av~~~sG~~Ai~~~l~al--~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~-~~ 126 (391)
T TIGR01328 61 VSNLEGRIAFLEGT-E--------A--AVATSSGMGAIAATLLTI--LKAGDHLISDECLYGCTFALLEHALTKFGI-QV 126 (391)
T ss_pred HHHHHHHHHHHhCC-C--------c--EEEECCHHHHHHHHHHHH--hCCCCEEEEecCcchHHHHHHHHHHhcCCe-EE
Confidence 56699999988643 1 1 257888888998887766 67999999999988754433 344677 66
Q ss_pred eeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeecc
Q psy6266 129 REYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCG 194 (218)
Q Consensus 129 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~ 194 (218)
+.++. .|.+.+++.+. +++.+++..+|+||||. +|.++|+++++++|.| ++|..
T Consensus 127 ~~vd~-------~d~e~l~~~i~---~~tklV~le~p~Np~G~v~dl~~I~~la~~~gi~livD--~a~a~ 185 (391)
T TIGR01328 127 DFINM-------AIPEEVKAHIK---DNTKIVYFETPANPTMKLIDMERVCRDAHSQGVKVIVD--NTFAT 185 (391)
T ss_pred EEECC-------CCHHHHHHhhc---cCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE--CCCch
Confidence 66643 16777777774 34556666799999997 7999999999999999 77763
No 195
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.17 E-value=3.1e-10 Score=100.55 Aligned_cols=116 Identities=13% Similarity=0.121 Sum_probs=83.9
Q ss_pred cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchh-HH---HHHHHhCCCcc
Q psy6266 53 LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWEN-HR---LVFLNAGFTEA 128 (218)
Q Consensus 53 ~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~-y~---~~~~~~g~~~~ 128 (218)
..+|+++++++.-. . +. +.+..|+.|+.+++. + +.+||+|++++|.|+. |. ..++..|+ ++
T Consensus 56 ~~~le~~lA~l~g~-~-------~~---v~~~sG~~ai~~~l~-~--l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~-~v 120 (390)
T PRK08064 56 REALEDIIAELEGG-T-------KG---FAFASGMAAISTAFL-L--LSKGDHVLISEDVYGGTYRMITEVLSRFGI-EH 120 (390)
T ss_pred HHHHHHHHHHHhCC-C-------Ce---EEECCHHHHHHHHHH-H--hCCCCEEEEccCccchHHHHHHHHHHHcCC-EE
Confidence 57888888887632 1 22 245555778776664 3 5789999999999984 32 34455788 77
Q ss_pred eeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 129 REYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 129 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
+.++. .|++.+++.+. +++.+++..+|+||||. +|.++|++++++++.| ++|...
T Consensus 121 ~~v~~-------~d~~~l~~~l~---~~tklV~l~~p~NptG~~~dl~~I~~la~~~g~~vvvD--~a~~~~ 180 (390)
T PRK08064 121 TFVDM-------TNLEEVAQNIK---PNTKLFYVETPSNPLLKVTDIRGVVKLAKAIGCLTFVD--NTFLTP 180 (390)
T ss_pred EEECC-------CCHHHHHHhcC---CCceEEEEECCCCCCcEeccHHHHHHHHHHcCCEEEEE--CCCCcc
Confidence 77754 15677777774 34566666899999997 7899999999999999 777653
No 196
>PLN02651 cysteine desulfurase
Probab=99.17 E-value=7.1e-10 Score=97.09 Aligned_cols=154 Identities=10% Similarity=0.093 Sum_probs=102.7
Q ss_pred CCCCccCchHHHHHHHHHhhc-CCCCccCcCCCC------cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHH
Q psy6266 20 EECKPWVLPVVRQAEKELAAD-DSLNHEYLPVLG------LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRV 92 (218)
Q Consensus 20 ~~~~~~~~~~v~~a~~~~~~~-~~~~~~Y~~~~G------~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~ 92 (218)
..+..++++.|.+|..+.... ...........+ +.++|+.+++++ + .++++| +.|.|+++++.+
T Consensus 5 ~a~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-g------~~~~~v--~~t~~~t~a~~~ 75 (364)
T PLN02651 5 MQATTPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALI-G------ADPKEI--IFTSGATESNNL 75 (364)
T ss_pred CcCCCCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHh-C------CCCCeE--EEeCCHHHHHHH
Confidence 344446788999987765532 000000000111 456677777655 3 233444 588999999888
Q ss_pred HHHHHHH--hcCCCeEEecCCCchhHHHH---HHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCC
Q psy6266 93 GAEFLHR--ILNYTTFYYSKPTWENHRLV---FLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHN 167 (218)
Q Consensus 93 ~~~~l~~--l~~gd~V~i~~P~y~~y~~~---~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~N 167 (218)
++..+.. +.+||+|++++-.++++... ++..|+ +++.++.. +.+.+|.+.+++.++ +++.++....++|
T Consensus 76 ~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~-~v~~v~~~--~~~~~d~~~l~~~i~---~~t~lv~v~~~~n 149 (364)
T PLN02651 76 AIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGF-EVTYLPVK--SDGLVDLDELAAAIR---PDTALVSVMAVNN 149 (364)
T ss_pred HHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCC-EEEEEccC--CCCcCCHHHHHHhcC---CCcEEEEEECCCC
Confidence 7765422 35799999999777765433 344577 77777762 235678999988885 3455666678999
Q ss_pred CcHH-----HHHHHhhcCeEEEeeCC
Q psy6266 168 PTAQ-----QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 168 PTG~-----~l~~l~~~~~i~ii~D~ 188 (218)
|||. +|.++|++++++++.|+
T Consensus 150 ~tG~~~~l~~I~~~~~~~g~~~~vD~ 175 (364)
T PLN02651 150 EIGVIQPVEEIGELCREKKVLFHTDA 175 (364)
T ss_pred CceecccHHHHHHHHHHcCCEEEEEc
Confidence 9998 79999999999999994
No 197
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.16 E-value=3.7e-10 Score=99.72 Aligned_cols=116 Identities=13% Similarity=0.129 Sum_probs=83.0
Q ss_pred cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCch-hHHH---HHHHhCCCcc
Q psy6266 53 LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWE-NHRL---VFLNAGFTEA 128 (218)
Q Consensus 53 ~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~-~y~~---~~~~~g~~~~ 128 (218)
...|++.++++.-. . . .+++..|+.++.+++. + +.|||+|++++|.|+ .|.. .++..|+ ++
T Consensus 52 ~~~Le~~lA~l~g~-~--------~--~~~~~sG~aai~~~~~-~--l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~-~v 116 (377)
T PRK07671 52 RAALEELIAVLEGG-H--------A--GFAFGSGMAAITAVMM-L--FSSGDHVILTDDVYGGTYRVMTKVLNRFGI-EH 116 (377)
T ss_pred HHHHHHHHHHHhCC-C--------c--eEEeCCHHHHHHHHHH-H--hCCCCEEEECCCccchHHHHHHHHHhcCCe-EE
Confidence 67888888887532 1 1 1345555677765543 3 579999999999999 5543 2334577 67
Q ss_pred eeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 129 REYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 129 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
+.++. .|++.+++++. +++.+++..+|+||||. +|.++|++++++++.| ++|...
T Consensus 117 ~~v~~-------~d~~~l~~ai~---~~tklV~le~P~NPtg~~~dl~~I~~la~~~g~~lvvD--~a~~~~ 176 (377)
T PRK07671 117 TFVDT-------SNLEEVEEAIR---PNTKAIYVETPTNPLLKITDIKKISTIAKEKGLLTIVD--NTFMTP 176 (377)
T ss_pred EEECC-------CCHHHHHHhcC---CCCeEEEEECCCCCCCcccCHHHHHHHHHHcCCEEEEE--CCCCcc
Confidence 66632 26788887774 34556666799999997 7999999999999999 888653
No 198
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.16 E-value=4.4e-10 Score=97.36 Aligned_cols=125 Identities=14% Similarity=0.063 Sum_probs=95.8
Q ss_pred CcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCC
Q psy6266 47 YLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFT 126 (218)
Q Consensus 47 Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~ 126 (218)
|.......+|++++++++.. ++ ++.|.++++|+..++.++. +.+||+|+++.|+|..+...+...|+
T Consensus 14 ~~~~~~~~~~~~~la~~~~~---------~~--~~~~~sgt~al~~~l~~l~-~~~gd~vl~~~~~~~~~~~~~~~~g~- 80 (352)
T cd00616 14 LTLGPKVREFEKAFAEYLGV---------KY--AVAVSSGTAALHLALRALG-IGPGDEVIVPSFTFVATANAILLLGA- 80 (352)
T ss_pred ccCCHHHHHHHHHHHHHhCC---------Ce--EEEECCHHHHHHHHHHHcC-CCCCCEEEeCCcchHHHHHHHHHcCC-
Confidence 34445689999999988632 22 2467788999998887652 46899999999999999999999999
Q ss_pred cceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 127 EAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 127 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+++.++.. .+.+.+|++.+++.+. +++.+++. .||||. +|.++|+++++++|.| .+++
T Consensus 81 ~~~~~~~~-~~~~~~d~~~l~~~i~---~~~~~v~~---~~~~G~~~~~~~i~~l~~~~~i~li~D--~a~~ 143 (352)
T cd00616 81 TPVFVDID-PDTYNIDPELIEAAIT---PRTKAIIP---VHLYGNPADMDAIMAIAKRHGLPVIED--AAQA 143 (352)
T ss_pred eEEEEecC-CCcCCcCHHHHHHhcC---cCCeEEEE---ECCCCCcCCHHHHHHHHHHcCCeEEEE--CCCC
Confidence 89999873 3356779999988774 33444442 357885 7999999999999999 6554
No 199
>PRK07179 hypothetical protein; Provisional
Probab=99.15 E-value=9.6e-10 Score=97.71 Aligned_cols=161 Identities=12% Similarity=0.004 Sum_probs=111.6
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcC-CCC---ccC-cCCCCcHHHHHHHHHHhcCCCCCCCcCCCceE
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADD-SLN---HEY-LPVLGLESFSSAATRMLLGGDASPPLREGRAF 79 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~---~~Y-~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~ 79 (218)
.|..+||++--.|-+- ...|.|++|..+.+++. ... ..| ....-..+|.+.+++++.. +.+
T Consensus 52 ~g~~~~~~~~~~YL~l----~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~---------~~~- 117 (407)
T PRK07179 52 PGPDAIILQSNDYLNL----SGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGF---------ESC- 117 (407)
T ss_pred CCCcEEEeecCCccCC----CCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCC---------CcE-
Confidence 4567788876666433 34566777766655331 111 111 1112357777877776522 233
Q ss_pred EEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEE
Q psy6266 80 GVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVI 159 (218)
Q Consensus 80 ~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i 159 (218)
+.|.||++|..++++++ ..+||.|++..+.+++....++..|+ +++.++ ..|++.+++.+++. ++.+
T Consensus 118 -~~~~sG~~An~~~l~~l--~~~g~~v~~~~~~h~s~~~~~~~~g~-~~~~~~-------~~d~~~l~~~l~~~--~~~l 184 (407)
T PRK07179 118 -LLCQSGWAANVGLLQTI--ADPNTPVYIDFFAHMSLWEGVRAAGA-QAHPFR-------HNDVDHLRRQIERH--GPGI 184 (407)
T ss_pred -EEECCHHHHHHHHHHHh--CCCCCEEEEECCcCHHHHHHHHHCCC-eEEEec-------CCCHHHHHHHHHhc--CCeE
Confidence 47899999999888877 56899999999998888777777787 665542 24788888888642 2455
Q ss_pred EEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeecc
Q psy6266 160 ILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCG 194 (218)
Q Consensus 160 il~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~ 194 (218)
++..+++||||. +|.++|+++++++|.| ++|..
T Consensus 185 V~v~~v~n~tG~i~pl~~I~~l~~~~~~~livD--ea~~~ 222 (407)
T PRK07179 185 IVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVD--ESHSL 222 (407)
T ss_pred EEECCCCCCCCccccHHHHHHHHHHcCCEEEEE--Ccccc
Confidence 556789999997 8999999999999999 88863
No 200
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.15 E-value=3.1e-10 Score=101.50 Aligned_cols=117 Identities=15% Similarity=0.109 Sum_probs=88.8
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHH----HHHHHhCCC
Q psy6266 51 LGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHR----LVFLNAGFT 126 (218)
Q Consensus 51 ~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~----~~~~~~g~~ 126 (218)
.-..+|++.++++.-. +. .+.|.+|+.|+..++.++ +.+||+|++++|.|+... ..++..|+
T Consensus 57 p~~~~le~~lA~l~g~---------~~--~v~~~sG~~Ai~~al~~l--~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~- 122 (418)
T TIGR01326 57 PTTDVLEQRIAALEGG---------VA--ALAVASGQAAITYAILNL--AQAGDNIVSSSYLYGGTYNLFKHTLKRLGI- 122 (418)
T ss_pred hhHHHHHHHHHHHhCC---------Ce--EEEEccHHHHHHHHHHHH--hCCCCEEEEECCCcHHHHHHHHHHHHHcCc-
Confidence 3467888988887632 12 358899999999888766 679999999999987533 34566788
Q ss_pred cceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 127 EAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 127 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+++.++. .|++.+++.+. +++.+++..+|+||||. +|.++|+++++++|.| ++|.
T Consensus 123 ~v~~v~~-------~d~~~l~~~l~---~~t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~livD--~t~~ 182 (418)
T TIGR01326 123 EVRFVDP-------DDPEEFEKAID---ENTKAVFAETIGNPAINVPDIEAIAEVAHAHGVPLIVD--NTFA 182 (418)
T ss_pred EEEEECC-------CCHHHHHHhcC---cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE--CCCc
Confidence 7777743 16788887774 33445555789999997 7999999999999999 7775
No 201
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.15 E-value=1e-09 Score=96.14 Aligned_cols=141 Identities=16% Similarity=0.057 Sum_probs=107.5
Q ss_pred chHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeE
Q psy6266 27 LPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTF 106 (218)
Q Consensus 27 ~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V 106 (218)
-+...++..+.++. +. ++.-.=..+|-+++++++-- ++ ++.+..+|.|+++++.++. +.|||+|
T Consensus 14 ~~~e~~~v~~vl~s--g~--i~~G~~v~~FE~~~ae~~G~-k~----------ava~~sgT~AL~laL~al~-ig~GDeV 77 (374)
T COG0399 14 GEEELAAVQEVLKS--GW--LTGGPFVRRFEQAFAEYLGV-KY----------AVAVSSGTAALHLALLALA-IGPGDEV 77 (374)
T ss_pred chHHHHHHHHHHHc--CC--eecChHHHHHHHHHHHHhCC-Ce----------EEEecChHHHHHHHHHhcC-CCCCCEE
Confidence 34555555565543 22 22322247788888877643 22 3588899999999998775 6899999
Q ss_pred EecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-HHHHHhhcCeEEEe
Q psy6266 107 YYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-QVAHMVDKHHVYLL 185 (218)
Q Consensus 107 ~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-~l~~l~~~~~i~ii 185 (218)
++|+=+|..-.+.+...|+ +|+.+.. +.+++.+|.+.++++|+.. .| .|+......||.-. +|.++|++|+|+||
T Consensus 78 I~ps~TfvATan~i~~~Ga-~PVFvDi-d~~T~nid~~~ie~aIt~~-tK-AIipVhl~G~~~dm~~i~~la~~~~l~vI 153 (374)
T COG0399 78 IVPSFTFVATANAVLLVGA-KPVFVDI-DPDTLNIDPDLIEAAITPR-TK-AIIPVHLAGQPCDMDAIMALAKRHGLPVI 153 (374)
T ss_pred EecCCchHHHHHHHHHcCC-eEEEEec-CCcccCCCHHHHHHHcccC-Ce-EEEEehhccCCCCHHHHHHHHHHcCCeEE
Confidence 9999999999999999999 9999998 4667889999999999743 22 33444567888766 89999999999999
Q ss_pred eC
Q psy6266 186 RS 187 (218)
Q Consensus 186 ~D 187 (218)
+|
T Consensus 154 ED 155 (374)
T COG0399 154 ED 155 (374)
T ss_pred EE
Confidence 99
No 202
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.14 E-value=3.5e-10 Score=99.21 Aligned_cols=140 Identities=18% Similarity=0.110 Sum_probs=99.4
Q ss_pred HHHHHHHHHhhcCCCCccCcC-CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEE
Q psy6266 29 VVRQAEKELAADDSLNHEYLP-VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFY 107 (218)
Q Consensus 29 ~v~~a~~~~~~~~~~~~~Y~~-~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~ 107 (218)
...++..++++. + .++. ..=..+|-+++++++-. + . ++.+..|+.|+.+++.++. +.+||+|+
T Consensus 6 e~~~~v~~~l~s-~---~~~~~g~~~~~fE~~~a~~~g~-~--------~--~~~~~sgt~Al~~al~~l~-~~~gdeVi 69 (363)
T PF01041_consen 6 EEIDAVLEVLRS-G---WLSTYGPYVEEFEKEFAEYFGV-K--------Y--AVAVSSGTSALHLALRALG-LGPGDEVI 69 (363)
T ss_dssp HHHHHHHHHHHH-T---CCSSSSHHHHHHHHHHHHHHTS-S--------E--EEEESSHHHHHHHHHHHTT-GGTTSEEE
T ss_pred HHHHHHHHHHHh-C---CccCCCHHHHHHHHHHHHHhCC-C--------e--EEEeCChhHHHHHHHHhcC-CCcCceEe
Confidence 344555555544 2 2332 23357888888887743 2 2 3578888999999998864 67999999
Q ss_pred ecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-HHHHHhhcCeEEEee
Q psy6266 108 YSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-QVAHMVDKHHVYLLR 186 (218)
Q Consensus 108 i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-~l~~l~~~~~i~ii~ 186 (218)
+|.=+|+.....+..+|+ +|+.++.. ++++.+|++.+++.+.+. .+.+++.....+|.-. +|.++|++|+|+||+
T Consensus 70 ~p~~t~~~~~~ai~~~G~-~pv~~Di~-~~~~~id~~~~~~~i~~~--t~ai~~~h~~G~~~d~~~i~~~~~~~~i~lIe 145 (363)
T PF01041_consen 70 VPAYTFPATASAILWAGA-EPVFVDID-PETLNIDPEALEKAITPK--TKAILVVHLFGNPADMDAIRAIARKHGIPLIE 145 (363)
T ss_dssp EESSS-THHHHHHHHTT--EEEEE-BE-TTTSSB-HHHHHHHHHTT--EEEEEEE-GGGB---HHHHHHHHHHTT-EEEE
T ss_pred cCCCcchHHHHHHHHhcc-EEEEEecc-CCcCCcCHHHHHHHhccC--ccEEEEecCCCCcccHHHHHHHHHHcCCcEEE
Confidence 999999999999999999 99999984 567899999999999743 2345555667777665 799999999999999
Q ss_pred CC
Q psy6266 187 SG 188 (218)
Q Consensus 187 D~ 188 (218)
|-
T Consensus 146 D~ 147 (363)
T PF01041_consen 146 DA 147 (363)
T ss_dssp E-
T ss_pred cc
Confidence 93
No 203
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.13 E-value=1.7e-10 Score=101.45 Aligned_cols=120 Identities=10% Similarity=0.077 Sum_probs=87.0
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcc
Q psy6266 49 PVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEA 128 (218)
Q Consensus 49 ~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~ 128 (218)
+.....+|+++++++..+ +. ++.+.||++|+.+++.+ +.|||+|+++.+.|+.-...+...-- +
T Consensus 52 ~~p~~~~le~~lA~leg~---------~~--~v~~~sG~aAi~~~l~~---l~~GD~VI~~~~~yg~~~~~~~~~~~-~- 115 (364)
T PRK07269 52 KNPTRAKLEETLAAIESA---------DY--ALATSSGMSAIVLAFSV---FPVGSKVVAVRDLYGGSFRWFNQQEK-E- 115 (364)
T ss_pred CCccHHHHHHHHHHHhCC---------Ce--EEEeCCHHHHHHHHHHH---hCCCCEEEEecCCcCchHHHHHHHHh-c-
Confidence 345678999999988743 22 46899999999988743 57999999999999865544433211 1
Q ss_pred eeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 129 REYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 129 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
..+.. .+..|.+.++++++ +++.+++..+|+||||. +|+++|++++++++.| ++|.
T Consensus 116 ~~~~~----~~~~d~~~l~~~i~---~~TklV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD--~t~~ 176 (364)
T PRK07269 116 GRFHF----TYANTEEELIAAIE---EDTDIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVD--NTFY 176 (364)
T ss_pred CcEEE----EecCCHHHHHHhcC---cCceEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEE--CCCc
Confidence 01110 12347788888775 34566777899999996 8999999999999999 7764
No 204
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.13 E-value=4.6e-10 Score=100.64 Aligned_cols=122 Identities=13% Similarity=0.132 Sum_probs=90.0
Q ss_pred cCcCCC--CcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHH----HH
Q psy6266 46 EYLPVL--GLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHR----LV 119 (218)
Q Consensus 46 ~Y~~~~--G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~----~~ 119 (218)
.|+-.. -...|.+.++++.-+ . . .+.+.+|+.|+.+++.++ +.|||+|++++|.|+.-. ..
T Consensus 56 ~y~r~~~p~~~~le~~lA~l~g~-~--------~--al~~~SG~~Ai~~al~al--l~pGd~VIv~~~~y~~t~~~~~~~ 122 (427)
T PRK05994 56 IYTRITNPTNAVLEERVAALEGG-T--------A--ALAVASGHAAQFLVFHTL--LQPGDEFIAARKLYGGSINQFGHA 122 (427)
T ss_pred ceECCCCccHHHHHHHHHHHhCC-C--------c--EEEEcCHHHHHHHHHHHH--hCCCCEEEEecCcchhHHHHHHHH
Confidence 355542 246778888877633 1 1 357888899999888876 679999999999998643 33
Q ss_pred HHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 120 FLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 120 ~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
++..|+ +++.++. .|.+.+++.+. +++.+++..+|+||||. +|.++|+++++++|.| +++.
T Consensus 123 ~~~~G~-~v~~vd~-------~d~~~l~~ai~---~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~livD--~a~a 188 (427)
T PRK05994 123 FKSFGW-QVRWADA-------DDPASFERAIT---PRTKAIFIESIANPGGTVTDIAAIAEVAHRAGLPLIVD--NTLA 188 (427)
T ss_pred HHhcCc-EEEEECC-------CCHHHHHHhcC---cCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE--CCcc
Confidence 566787 7776642 26777777774 34555666799999997 7999999999999999 6765
No 205
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.12 E-value=2.8e-10 Score=100.04 Aligned_cols=115 Identities=15% Similarity=0.083 Sum_probs=85.4
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHH----HHhC
Q psy6266 49 PVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVF----LNAG 124 (218)
Q Consensus 49 ~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~----~~~g 124 (218)
+.....+|+++++++. + . + . +++.+|+.|+.+++.++ +.|||+|++++|.|+.+...+ +..|
T Consensus 49 ~~p~~~~Le~~lA~l~-~-~-------~-~--v~~~sG~~Ai~~~l~al--l~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G 114 (366)
T PRK07582 49 SNPTWRALEAALGELE-G-A-------E-A--LVFPSGMAAITAVLRAL--LRPGDTVVVPADGYYQVRALAREYLAPLG 114 (366)
T ss_pred CCccHHHHHHHHHHHc-C-C-------C-E--EEECCHHHHHHHHHHHh--cCCCCEEEEeCCCcHhHHHHHHHHHhcCe
Confidence 6778999999999876 5 2 2 2 36677778998887766 689999999999999987654 3457
Q ss_pred CCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 125 FTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 125 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+ +++.++.. . +.. . +. +++.+++..+|+||||. +|.++|++++++++.| ++|.
T Consensus 115 ~-~v~~v~~~-~-----~~~---~-~~---~~t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~lvVD--~t~~ 172 (366)
T PRK07582 115 V-TVREAPTA-G-----MAE---A-AL---AGADLVLAETPSNPGLDVCDLAALAAAAHAAGALLVVD--NTTA 172 (366)
T ss_pred E-EEEEECCC-C-----hHH---H-hc---cCceEEEEECCCCCCCCccCHHHHHHHHHHcCCEEEEE--CCCC
Confidence 7 77777542 1 111 1 11 23445555799999995 8999999999999999 7774
No 206
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.12 E-value=7.4e-10 Score=98.04 Aligned_cols=176 Identities=12% Similarity=0.077 Sum_probs=108.1
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCC-CCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDS-LNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
..|...||+.-|.....-| +..+.|.+|.++.+++.+ ....|....+ .+|.+.++++. + . ...+++ +.
T Consensus 40 ~dg~~~lD~~s~~~~~~lG--~~~p~v~~ai~~~~~~~~~~~~~~~~~~~-~~la~~l~~~~-~-~----~~~~~v--~~ 108 (398)
T PRK03244 40 VDGKEYLDLLGGIAVNALG--HAHPAVVEAVTRQLATLGHVSNLFATEPQ-IALAERLVELL-G-A----PEGGRV--FF 108 (398)
T ss_pred CCCCEEEECCcCHhhccCC--CCCHHHHHHHHHHHHhccCccCccCCHHH-HHHHHHHHHhC-C-C----CCCCEE--EE
Confidence 4688888998876444455 346788888777665411 1234654443 35555555443 2 1 122444 69
Q ss_pred eccChhHHHHHHHHHHHhcCC-CeEEecCCCchhHHHHHHHhCCCcceeEec--cCCcCc---cccHHHHHHHHhcCCCC
Q psy6266 83 TLSGTGALRVGAEFLHRILNY-TTFYYSKPTWENHRLVFLNAGFTEAREYRY--WNPEKR---AVDFTGMYEDLVNAPDN 156 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~g-d~V~i~~P~y~~y~~~~~~~g~~~~~~~~~--~~~~~~---~~d~~~~~~~l~~~~~~ 156 (218)
|.||++|+..++++... +| +.|+..+++|..+.......+.......++ ...+.. ..|++.+++.+. ++
T Consensus 109 ~~sgsea~~~al~~~~~--~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~---~~ 183 (398)
T PRK03244 109 CNSGAEANEAAFKLARL--TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVD---DD 183 (398)
T ss_pred eCchHHHHHHHHHHHHH--HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhc---CC
Confidence 99999999999886643 55 577788899988754333332201111100 000000 126777777663 23
Q ss_pred cEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccCCC
Q psy6266 157 SVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGLTT 197 (218)
Q Consensus 157 ~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l~~ 197 (218)
..+++..+++||||. +|.++|++|++++|.| |+|.++-.
T Consensus 184 ~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~D--Ev~~g~gr 231 (398)
T PRK03244 184 TAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLD--EVQTGIGR 231 (398)
T ss_pred eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe--ccccCCcc
Confidence 344444678999997 6889999999999999 99988643
No 207
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.11 E-value=1.1e-09 Score=97.17 Aligned_cols=150 Identities=10% Similarity=0.038 Sum_probs=102.5
Q ss_pred ccCchHHHHHHHHHhhc-C----CCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHH
Q psy6266 24 PWVLPVVRQAEKELAAD-D----SLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLH 98 (218)
Q Consensus 24 ~~~~~~v~~a~~~~~~~-~----~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~ 98 (218)
....|.++++..+++++ . .....|+...+..+|++++++++.+ . +. .+.+.|.+... .+++++
T Consensus 11 l~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g~-e-------~a--l~~~sG~~a~~-~~i~~l- 78 (392)
T PLN03227 11 TSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLGT-E-------SA--ILYSDGASTTS-STVAAF- 78 (392)
T ss_pred CCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhCC-C-------cE--EEecCcHHHHH-HHHHHh-
Confidence 34566777776666543 0 0122377777899999999998743 1 22 23445544444 555555
Q ss_pred HhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC--------CCCcEEEEcccCCCCcH
Q psy6266 99 RILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA--------PDNSVIILHACAHNPTA 170 (218)
Q Consensus 99 ~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~--------~~~~~iil~~~p~NPTG 170 (218)
+.|||.|+++++.|++....+.+.++ +++.++.- + ..+++.+.+.+... ++++++++..+++||+|
T Consensus 79 -~~~GD~Vl~~~~~h~s~~~~~~l~~~-~~~~~~~~--d--~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G 152 (392)
T PLN03227 79 -AKRGDLLVVDRGVNEALLVGVSLSRA-NVRWFRHN--D--MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTG 152 (392)
T ss_pred -CCCCCEEEEeccccHHHHHHHHHcCC-eEEEeCCC--C--HHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCC
Confidence 68999999999999999887777777 66666431 1 12455555555321 13456676778999999
Q ss_pred H-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 171 Q-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 171 ~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
. ++.++|++|++++|.| +++.
T Consensus 153 ~i~~l~~i~~l~~~~g~~livD--e~~~ 178 (392)
T PLN03227 153 TLAPLKELVALKEEFHYRLILD--ESFS 178 (392)
T ss_pred cccCHHHHHHHHHHcCCEEEEE--Cccc
Confidence 7 7899999999999999 8875
No 208
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.10 E-value=9.1e-10 Score=97.23 Aligned_cols=122 Identities=16% Similarity=0.181 Sum_probs=86.9
Q ss_pred CccCcCCCC--cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHH-
Q psy6266 44 NHEYLPVLG--LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVF- 120 (218)
Q Consensus 44 ~~~Y~~~~G--~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~- 120 (218)
.+.|+...+ ..+|++.++++. + . +.+ +++.+++.|+.+++. + +.+||+|++++|.|+.....+
T Consensus 38 ~~~Y~r~~~p~~~~le~~la~l~-g-~-------~~~--l~~~sG~~al~~~l~-l--l~~Gd~Vl~~~~~y~~~~~~~~ 103 (378)
T TIGR01329 38 PYDYTRSGNPTRTALESLLAKLD-K-A-------DRA--FAFSSGMAALDVITR-L--LNNGDEIIAGDDLYGGTDRLLT 103 (378)
T ss_pred CCccCCCCChHHHHHHHHHHHHh-C-C-------CcE--EEECCHHHHHHHHHH-H--hCCCCEEEEcCCCchHHHHHHH
Confidence 356876522 456666666654 2 1 222 466777778877654 3 579999999999999876543
Q ss_pred ---HHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceee
Q psy6266 121 ---LNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINM 192 (218)
Q Consensus 121 ---~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y 192 (218)
+..|+ +++.++. .|++.+++.++ +++.+++..+|+||||. +|+++|+++++++|.| .++
T Consensus 104 ~~~~~~G~-~v~~vd~-------~d~~~le~~i~---~~tklv~le~psnptg~v~dl~~I~~la~~~g~~vivD--~a~ 170 (378)
T TIGR01329 104 QVVPRSGV-VVVHVDT-------TDLDKVKAALG---PKTKLVLLESPTNPLQKIVDIRKISEMAHAQNALVVVD--NTM 170 (378)
T ss_pred HHHHHcCc-EEEEeCC-------CCHHHHHHhcC---cCceEEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEE--CCC
Confidence 44687 7777643 26777877774 45566666799999997 7899999999999999 665
No 209
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.10 E-value=6.3e-10 Score=99.67 Aligned_cols=116 Identities=12% Similarity=0.126 Sum_probs=84.0
Q ss_pred CcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHH----hCCCc
Q psy6266 52 GLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLN----AGFTE 127 (218)
Q Consensus 52 G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~----~g~~~ 127 (218)
-..+|.++++++..+ . . .+.+.+|++|+.++++++ +.+||+|++++|.|+.-...+.. .|. +
T Consensus 59 t~~~Le~~lA~l~g~-~--------~--~l~~ssG~~Ai~~al~al--~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi-~ 124 (425)
T PRK06084 59 TNDVLEQRVAALEGG-V--------G--ALAVASGMAAITYAIQTI--AEAGDNIVSVAKLYGGTYNLLAHTLPRIGI-E 124 (425)
T ss_pred hHHHHHHHHHHHhCC-C--------c--eeEehhHHHHHHHHHHHH--hCCCCEEEEeCCCcchHHHHHHHhccccee-E
Confidence 356888888877532 1 1 247788889999998876 67999999999999854433332 233 3
Q ss_pred ceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 128 AREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 128 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+..++ ..|++.+++.+.+ ++.+++..+|+||||. +|.++|+++++++|.| ++|.
T Consensus 125 v~~~d-------~~d~e~le~ai~~---~tklV~lesp~NPtG~v~dl~~I~~la~~~~i~vVvD--~a~a 183 (425)
T PRK06084 125 TRFAA-------HDDIAALEALIDE---RTKAVFCESIGNPAGNIIDIQALADAAHRHGVPLIVD--NTVA 183 (425)
T ss_pred EEEEC-------CCCHHHHHHHhcc---CCcEEEEeCCCCCCCeecCHHHHHHHHHHcCCEEEEE--CCCc
Confidence 33331 2378888888853 3444555789999998 7999999999999999 7776
No 210
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.08 E-value=1.6e-09 Score=95.21 Aligned_cols=124 Identities=14% Similarity=0.120 Sum_probs=91.7
Q ss_pred ccCc--CCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHH--
Q psy6266 45 HEYL--PVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVF-- 120 (218)
Q Consensus 45 ~~Y~--~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~-- 120 (218)
+.|. +..-..+|.++++++.-+ +. .+++.+|++|+.+++.++ +.+||+|++++|.|+.....+
T Consensus 32 ~~y~r~~~p~~~~le~~la~l~g~---------~~--a~~~~sG~~Ai~~~l~~l--~~~gd~Vl~~~~~y~~~~~~~~~ 98 (369)
T cd00614 32 YIYSRIGNPTVDALEKKLAALEGG---------EA--ALAFSSGMAAISTVLLAL--LKAGDHVVASDDLYGGTYRLFER 98 (369)
T ss_pred ceeECCCChhHHHHHHHHHHHHCC---------CC--EEEEcCHHHHHHHHHHHH--cCCCCEEEECCCCcchHHHHHHH
Confidence 4465 556678999999887532 12 357788899999988876 679999999999998865433
Q ss_pred --HHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 121 --LNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 121 --~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+..|+ ++..++. .|++.+++.++ +++.+++..+|+||||. +|.++|++++++++.| ++|.
T Consensus 99 ~~~~~g~-~~~~v~~-------~d~~~l~~~i~---~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~livD--~t~~ 165 (369)
T cd00614 99 LLPKLGI-EVTFVDP-------DDPEALEAAIK---PETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVD--NTFA 165 (369)
T ss_pred HHhhcCe-EEEEeCC-------CCHHHHHHhcC---CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE--CCCc
Confidence 35566 6666533 15677777774 24455556789999997 8999999999999999 7775
Q ss_pred c
Q psy6266 194 G 194 (218)
Q Consensus 194 ~ 194 (218)
.
T Consensus 166 ~ 166 (369)
T cd00614 166 T 166 (369)
T ss_pred c
Confidence 4
No 211
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.06 E-value=3.1e-09 Score=92.81 Aligned_cols=136 Identities=14% Similarity=0.061 Sum_probs=89.5
Q ss_pred CchHHHHHHHHHhhcCCCCccCc-CCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCC
Q psy6266 26 VLPVVRQAEKELAADDSLNHEYL-PVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYT 104 (218)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~~Y~-~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd 104 (218)
-.|.|++|..+.+++ |. +..=..+|++.+++++ + .+++++ ++++|+++|+..++.++ ++|||
T Consensus 34 ~~~~~~~~~~~~~~~------~~g~~~~~~~Le~~lA~~~-g------~~~e~i--lv~~gg~~a~~~~~~al--~~~gd 96 (346)
T TIGR03576 34 GGFKIDEEDLELLET------YVGPAIFEEKVQELGREHL-G------GPEEKI--LVFNRTSSAILATILAL--EPPGR 96 (346)
T ss_pred CChhHHHHHHHHHHH------hcCCHHHHHHHHHHHHHHc-C------CCcceE--EEECCHHHHHHHHHHHh--CCCCC
Confidence 355677766665533 31 1122344444554443 2 334554 69999999999999887 68999
Q ss_pred eEEec---CCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH--------HH
Q psy6266 105 TFYYS---KPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ--------QV 173 (218)
Q Consensus 105 ~V~i~---~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~--------~l 173 (218)
+|+++ .|+|++|...+++.|+ +++.+ . +++.+ +.. +++.+++. +++||+|. +|
T Consensus 97 ~Vli~~~d~p~~~s~~~~~~l~ga-~~~~~----~-----~l~~l----~~~-~~~~lIii-tg~s~~G~v~~~~~L~~i 160 (346)
T TIGR03576 97 KVVHYLPEKPAHPSIPRSCKLAGA-EYFES----D-----ELSEL----KKI-DGTSLVVI-TGSTMDLKVVSEEDLKRV 160 (346)
T ss_pred EEEECCCCCCCchhHHHHHHHcCC-EEecc----C-----CHHHH----hhC-cCceEEEE-ECCCCCCcccCHHHHHHH
Confidence 99975 4799999999999998 65322 1 23332 211 23333333 56788885 67
Q ss_pred HHHhhcCeEEEeeCCceeeccCC
Q psy6266 174 AHMVDKHHVYLLRSGRINMCGLT 196 (218)
Q Consensus 174 ~~l~~~~~i~ii~D~r~~y~~l~ 196 (218)
++++++++++++.| ++|....
T Consensus 161 ~~la~~~~~~livD--EAy~~~~ 181 (346)
T TIGR03576 161 IKQAKSKEAIVLVD--DASGARV 181 (346)
T ss_pred HHHHHHcCCEEEEE--CCccccc
Confidence 78889999999999 9998654
No 212
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.04 E-value=2e-09 Score=95.11 Aligned_cols=116 Identities=11% Similarity=0.138 Sum_probs=82.3
Q ss_pred cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHH----HHHhCCCcc
Q psy6266 53 LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLV----FLNAGFTEA 128 (218)
Q Consensus 53 ~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~----~~~~g~~~~ 128 (218)
...|+++++++.-. . . .+.+..|+.|+.+++. + +.|||+|++++|.|++.... ++..|+ ++
T Consensus 52 ~~~Le~~la~l~g~-~--------~--al~~~SG~~Al~~~l~-~--l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi-~v 116 (380)
T PRK06176 52 RFALEELIADLEGG-V--------K--GFAFASGLAGIHAVFS-L--FQSGDHVLLGDDVYGGTFRLFDKVLVKNGL-SC 116 (380)
T ss_pred HHHHHHHHHHHhCC-C--------C--EEEECCHHHHHHHHHH-H--cCCCCEEEEcCCChhHHHHHHHHHHHhcCe-EE
Confidence 67788888877533 1 1 2355666778876553 3 57999999999999865433 344566 55
Q ss_pred eeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 129 REYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 129 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
..++. .|.+.+++++. +++.+++..+|+||||. +|.++|+++++++|.| .+|...
T Consensus 117 ~~vd~-------~d~e~l~~ai~---~~t~lV~lesP~Nptg~~~di~~I~~la~~~gi~vivD--~t~a~~ 176 (380)
T PRK06176 117 TIIDT-------SDLSQIKKAIK---PNTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVD--NTFATP 176 (380)
T ss_pred EEcCC-------CCHHHHHHhcC---cCceEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEE--CCcccc
Confidence 55432 36777877774 34555666789999997 7999999999999999 887643
No 213
>KOG0633|consensus
Probab=99.01 E-value=5.9e-10 Score=91.89 Aligned_cols=115 Identities=10% Similarity=0.048 Sum_probs=91.0
Q ss_pred cCCCceEEEEeccChhHHHHHHHHHHHhcCC-CeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHh
Q psy6266 73 LREGRAFGVQTLSGTGALRVGAEFLHRILNY-TTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLV 151 (218)
Q Consensus 73 ~~~~~v~~~~t~G~~~al~~~~~~l~~l~~g-d~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~ 151 (218)
+++++++ +.+|+.+.+.++.++. +.|| +.++..+|+|+-|.--....++ .++.+|+. . .|.++.+.+.+.++
T Consensus 84 Lt~dnic--~GvGsDE~ID~iiR~~--c~PGkeKIl~cPPtysMY~v~A~iNd~-eVvkvpl~-p-dF~lnvdai~evl~ 156 (375)
T KOG0633|consen 84 LTSDNIC--VGVGSDELIDLIIRCV--CDPGKEKILDCPPTYSMYVVDAAINDA-EVVKVPLN-P-DFSLNVDAIAEVLE 156 (375)
T ss_pred CCccceE--EecCcHHHHHHHHhhe--ecCCccceeecCCcceeEEEEeecCCc-eEEEecCC-C-CccccHHHHHHHHh
Confidence 6777764 8899999999998865 6799 9999999999999866666777 88999883 3 68999999999887
Q ss_pred cCCCCcEEEEcccCCCCcHH-----HHHHHhhcC-eEEEeeCCceeeccCCC
Q psy6266 152 NAPDNSVIILHACAHNPTAQ-----QVAHMVDKH-HVYLLRSGRINMCGLTT 197 (218)
Q Consensus 152 ~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~-~i~ii~D~r~~y~~l~~ 197 (218)
.. .+.++++..||+||||. .|.++.+.. +..++.| |+|-+|+-
T Consensus 157 ~d-s~iK~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvD--EAYidFsg 205 (375)
T KOG0633|consen 157 LD-SKIKCIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVD--EAYIDFSG 205 (375)
T ss_pred cc-ccceEEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEe--eeeEeecc
Confidence 53 34556777899999998 455555432 5788888 99988755
No 214
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.01 E-value=5.3e-09 Score=91.38 Aligned_cols=146 Identities=12% Similarity=-0.053 Sum_probs=96.6
Q ss_pred CccCchHHHHHHHHHhhcCCCCccCcC--CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHh
Q psy6266 23 KPWVLPVVRQAEKELAADDSLNHEYLP--VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRI 100 (218)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~~~~~~Y~~--~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l 100 (218)
...+.+.|.+|+..-. .+ +.+ ..=+.++|+.+++++ + .+++...+++|.|+++++..++..+ +
T Consensus 11 p~~~~~~v~~~~~~~~-----~~-~~~~~~~~~~~~r~~la~l~-~------~~~~~~~i~~t~~~t~al~~~~~~l--~ 75 (363)
T TIGR02326 11 PLTTSRTVKEAMLFDW-----CT-WDSDYNIVVEQIRQQLLALA-T------AEEGYTSVLLQGSGTFAVEAVIGSA--V 75 (363)
T ss_pred CCCCCHHHHHHhCCCC-----CC-CChHHHHHHHHHHHHHHHHh-C------CCCCceEEEEcCCCHHHHHHHHHhc--C
Confidence 3566778887643211 11 111 001345566666554 3 2222112468999999999988776 5
Q ss_pred cCCCeEEecCCCchhH--HHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HH
Q psy6266 101 LNYTTFYYSKPTWENH--RLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QV 173 (218)
Q Consensus 101 ~~gd~V~i~~P~y~~y--~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l 173 (218)
.+||.+++..+.+.+. ..+++..|+ +++.++.. +...+|++.+++.+++. ++..++....++||||. +|
T Consensus 76 ~~~~~vlv~~~~~~~~~~~~~a~~~g~-~~~~v~~~--~~~~~d~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~i~~I 151 (363)
T TIGR02326 76 PKDGKLLVVINGAYGARIVQIAEYLGI-PHHVVDTG--EVEPPDVVEVEAILAAD-PAITHIALVHCETTTGILNPIEAV 151 (363)
T ss_pred CCCCeEEEEeCChhhHHHHHHHHHcCC-ceEEEeCC--CCCCCCHHHHHHHHhhC-CCccEEEEEeecCCccccCcHHHH
Confidence 6888877766655443 355677898 88888762 34568999999988753 22333444567999998 79
Q ss_pred HHHhhcCeEEEeeC
Q psy6266 174 AHMVDKHHVYLLRS 187 (218)
Q Consensus 174 ~~l~~~~~i~ii~D 187 (218)
.++|++++++++.|
T Consensus 152 ~~l~~~~g~~livD 165 (363)
T TIGR02326 152 AKLAHRHGKVTIVD 165 (363)
T ss_pred HHHHHHcCCEEEEE
Confidence 99999999999999
No 215
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.00 E-value=3.2e-09 Score=95.33 Aligned_cols=122 Identities=18% Similarity=0.210 Sum_probs=90.5
Q ss_pred ccCcCCCC--cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHH--
Q psy6266 45 HEYLPVLG--LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVF-- 120 (218)
Q Consensus 45 ~~Y~~~~G--~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~-- 120 (218)
+.|+-..+ ..+|++.++++.-+ . . .+.|.+++.|+.+++.++ +.+||+|++++..|+.-...+
T Consensus 56 ~~y~R~~~p~~~~le~~lA~l~g~-~--------~--av~~sSGt~Al~~al~~l--l~~Gd~Vi~~~~~y~~t~~~~~~ 122 (433)
T PRK08134 56 HVYSRISNPTVAVLEERVAALEGG-V--------G--AIATASGQAALHLAIATL--MGAGSHIVASSALYGGSHNLLHY 122 (433)
T ss_pred ceeecCcChHHHHHHHHHHHHhCC-C--------c--EEEeCCHHHHHHHHHHHH--hCCCCEEEEeCCccHHHHHHHHH
Confidence 34543322 67888888877643 2 1 257899999999988776 679999999999998654444
Q ss_pred --HHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceee
Q psy6266 121 --LNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINM 192 (218)
Q Consensus 121 --~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y 192 (218)
+..|+ +++.++. + |.+.+++.|. +++++++..+++||||. +|.++|+++++++|.| .++
T Consensus 123 ~l~~~Gi-~v~~vd~---~----d~~~l~~~i~---~~TklV~~e~~~np~g~v~Di~~I~~la~~~gi~livD--~t~ 188 (433)
T PRK08134 123 TLRRFGI-ETTFVKP---G----DIDGWRAAIR---PNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVD--STF 188 (433)
T ss_pred HHhhCCe-EEEEECC---C----CHHHHHHhcC---CCCeEEEEECCCcccCcccCHHHHHHHHHHcCCEEEEE--CCC
Confidence 34677 7777643 1 6778888775 34555566689999997 7999999999999999 554
No 216
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=98.98 E-value=4.7e-09 Score=93.42 Aligned_cols=101 Identities=14% Similarity=0.111 Sum_probs=71.1
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHH-----HHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcE
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRL-----VFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSV 158 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~-----~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~ 158 (218)
.+|+.|+.+++.++ +.|||+|++++|+|+.|.. .+...|+ +++.++.. .+.+.+|++.+++.+++. ++.
T Consensus 94 ~sgt~al~~~l~~l--~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~-~~~~~~d~~~l~~~i~~~--~~k 167 (416)
T PRK00011 94 HSGSQANAAVYFAL--LKPGDTILGMDLAHGGHLTHGSPVNFSGKLY-NVVSYGVD-EETGLIDYDEVEKLALEH--KPK 167 (416)
T ss_pred CCchHHHHHHHHHh--cCCCCEEEEeccccCCcccccccccccccee-eEeecCcC-cccCCcCHHHHHHHHHhc--CCC
Confidence 35678888888776 6899999999999987532 1233356 66666652 234678999999988642 233
Q ss_pred EEEcccCCCCcHH---HHHHHhhcCeEEEeeCCceee
Q psy6266 159 IILHACAHNPTAQ---QVAHMVDKHHVYLLRSGRINM 192 (218)
Q Consensus 159 iil~~~p~NPTG~---~l~~l~~~~~i~ii~D~r~~y 192 (218)
+++.+.++||+.. +|.++|+++++++|.| +++
T Consensus 168 ~v~~~~~~~~~~~~~~~I~~la~~~~~~livD--~a~ 202 (416)
T PRK00011 168 LIIAGASAYSRPIDFKRFREIADEVGAYLMVD--MAH 202 (416)
T ss_pred EEEECCCcCCCccCHHHHHHHHHHcCCEEEEE--Ccc
Confidence 3333445666543 7899999999999999 764
No 217
>PRK05968 hypothetical protein; Provisional
Probab=98.93 E-value=1.1e-08 Score=90.58 Aligned_cols=117 Identities=9% Similarity=0.079 Sum_probs=84.2
Q ss_pred cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhH----HHHHHHhCCCcc
Q psy6266 53 LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENH----RLVFLNAGFTEA 128 (218)
Q Consensus 53 ~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y----~~~~~~~g~~~~ 128 (218)
..+|+++++++..+ . . .+++.+|+.|+.+++.++ +.|||+|++++|.|+.- ...++..|+ ++
T Consensus 65 ~~~le~~lA~l~g~-~--------~--av~~~sG~~Ai~~al~al--~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~-~v 130 (389)
T PRK05968 65 VRAFEEMLAKLEGA-E--------D--ARGFASGMAAISSTVLSF--VEPGDRIVAVRHVYPDAFRLFETILKRMGV-EV 130 (389)
T ss_pred HHHHHHHHHHHhCC-C--------c--EEEECCHHHHHHHHHHHH--hCCCCEEEEeCCCchHHHHHHHHHHHHcCc-eE
Confidence 57899999887533 1 1 236677788988877665 67999999999999863 345566788 77
Q ss_pred eeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccCC
Q psy6266 129 REYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGLT 196 (218)
Q Consensus 129 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l~ 196 (218)
+.++. .|.+.+++.+. + +.+++..+|+||++. +|.++|++++++++.| .+|....
T Consensus 131 ~~vd~-------~d~~~l~~~i~---~-tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~vivD--~a~a~~~ 190 (389)
T PRK05968 131 DYVDG-------RDEEAVAKALP---G-AKLLYLESPTSWVFELQDVAALAALAKRHGVVTMID--NSWASPV 190 (389)
T ss_pred EEeCC-------CCHHHHHHhcc---c-CCEEEEECCCCCCCcHHHHHHHHHHHHHcCCEEEEE--CCCcchh
Confidence 76632 26677777662 2 234444679999986 7899999999999999 7776543
No 218
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=98.91 E-value=3.7e-08 Score=87.38 Aligned_cols=163 Identities=13% Similarity=-0.003 Sum_probs=101.2
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCC-c----cCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEE
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLN-H----EYLPVLGLESFSSAATRMLLGGDASPPLREGRAFG 80 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~----~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~ 80 (218)
|.++||++--.|- | ....|.|++|..+.++..+.. . .|....-..+|.+.++++... +. .
T Consensus 44 ~~~~~~~~sn~yl---g-l~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~---------~~--~ 108 (402)
T TIGR01821 44 AKDVTVWCSNDYL---G-MGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGK---------ES--A 108 (402)
T ss_pred CeeEEEeEccCcC---C-CCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCC---------Ce--E
Confidence 3677888777663 3 455777888877666431111 1 122223356788888776521 12 2
Q ss_pred EEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCC-CCcEE
Q psy6266 81 VQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAP-DNSVI 159 (218)
Q Consensus 81 ~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~~~~i 159 (218)
+.+..|++|...++.++....+++.|+.....++.....++..|. ++..++. .|++.+++.+.... +++.+
T Consensus 109 l~~~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~-~~~~~~~-------~d~~~l~~~l~~~~~~~~~~ 180 (402)
T TIGR01821 109 LVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGA-EKFIFRH-------NDVAHLEKLLQSVDPNRPKI 180 (402)
T ss_pred EEECchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCC-eEEEECC-------CCHHHHHHHHHhccCCCCeE
Confidence 355556777777666553223677776665566555555565665 4443321 25566666665332 24556
Q ss_pred EEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 160 ILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 160 il~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
++..+++||||. +|.++|++|++++|.| ++|.
T Consensus 181 v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livD--ea~~ 217 (402)
T TIGR01821 181 IAFESVYSMDGDIAPIEEICDLADKYGALTYLD--EVHA 217 (402)
T ss_pred EEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEe--Cccc
Confidence 666789999997 7999999999999999 8877
No 219
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=98.89 E-value=9.3e-09 Score=92.35 Aligned_cols=112 Identities=10% Similarity=0.096 Sum_probs=86.1
Q ss_pred EEEeccChh-HHHHHHHHHHHhc-CCCeEEecCCCchhHHHHHHHhCCCcceeEec-cCCcCccccHHHHHHHHhcCCCC
Q psy6266 80 GVQTLSGTG-ALRVGAEFLHRIL-NYTTFYYSKPTWENHRLVFLNAGFTEAREYRY-WNPEKRAVDFTGMYEDLVNAPDN 156 (218)
Q Consensus 80 ~~~t~G~~~-al~~~~~~l~~l~-~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~-~~~~~~~~d~~~~~~~l~~~~~~ 156 (218)
.+.++|+++ ++.+++.++.... +||+|++|.=+|.+-...+..+|+ +|+.++. .+++.+.+|.+.++++|++.+++
T Consensus 126 a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~-~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~k 204 (444)
T TIGR03531 126 AFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGF-EPRVIETVLDGDELTTDVEDIERAIEEIGPD 204 (444)
T ss_pred EEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCC-eEEEeeeeecCcCCCcCHHHHHHHHHhccCC
Confidence 457888885 7777665543111 589999999999999999999999 9999985 34556788999999999754335
Q ss_pred cEEEEcccCC-CCcHH-----HHHHHhhcCeEEEeeCCceeecc
Q psy6266 157 SVIILHACAH-NPTAQ-----QVAHMVDKHHVYLLRSGRINMCG 194 (218)
Q Consensus 157 ~~iil~~~p~-NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~ 194 (218)
.+++++++|+ .++|. +|+++|++|+||++.| .+|..
T Consensus 205 ai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvD--aAyg~ 246 (444)
T TIGR03531 205 NILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVN--NAYGL 246 (444)
T ss_pred CEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEE--CcCcC
Confidence 5555555554 44443 8999999999999999 99985
No 220
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=98.88 E-value=4.6e-08 Score=86.69 Aligned_cols=177 Identities=12% Similarity=0.093 Sum_probs=103.5
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ...|.|.+|.++.++.......+.++.-..+|-+.++++. + .++ ++.+
T Consensus 38 ~~g~~~lD~~~~~~~~~~G--h~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~--------~~~--~~~~ 104 (401)
T PRK00854 38 TDGNRYLDCLSAYSAVNQG--HCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALT-G--------SHK--VLPM 104 (401)
T ss_pred CCCCEEEEcCcchhhccCC--CCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC-C--------CCE--EEEe
Confidence 4566777765553222233 3367788877666543111112233333445555555432 2 133 3588
Q ss_pred ccChhHHHHHHHHHHHh-------cCC-CeEEecCCCchhHHHHHHHhCCCcceeEeccC---CcC---ccccHHHHHHH
Q psy6266 84 LSGTGALRVGAEFLHRI-------LNY-TTFYYSKPTWENHRLVFLNAGFTEAREYRYWN---PEK---RAVDFTGMYED 149 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l-------~~g-d~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~---~~~---~~~d~~~~~~~ 149 (218)
.+|++|...++.++... .+| ++|++.+-+|......+...+. .+.....+. ... ...|++.+++.
T Consensus 105 ~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~le~~ 183 (401)
T PRK00854 105 NSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFST-DPDARGGFGPFTPGFRVVPFGDAEALEAA 183 (401)
T ss_pred CCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccC-CccccccCCCCCCCeEEeCCCCHHHHHHH
Confidence 89999999988876432 124 6777777776553322223333 222110000 000 01377888877
Q ss_pred HhcCCCCcEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 150 LVNAPDNSVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 150 l~~~~~~~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
+. +++.+++.++++||||. +|.++|++|++++|.| |+|.++.+..
T Consensus 184 i~---~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~D--Ev~~g~g~~g 237 (401)
T PRK00854 184 IT---PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILD--EIQTGLGRTG 237 (401)
T ss_pred hC---CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe--chhhCCCCCc
Confidence 74 34566777899999996 6889999999999999 9999875543
No 221
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=98.86 E-value=9.3e-09 Score=86.42 Aligned_cols=164 Identities=14% Similarity=0.068 Sum_probs=107.8
Q ss_pred eeeeeeeEEeCCCCCccCchHHHHHHHH----HhhcC---CCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 9 HCCEIRNAYRTEECKPWVLPVVRQAEKE----LAADD---SLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 9 ~i~l~iG~~~~~~~~~~~~~~v~~a~~~----~~~~~---~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
.|+|+-|. |...|.+.+..+. ++.+. +....|..++|...|.+++++.+.+ +++-.+++++|.
T Consensus 32 ~imLggGN-------Pa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~-~ygwnit~~NIa-- 101 (417)
T COG3977 32 AIMLGGGN-------PARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRR-EYGWNITAQNIA-- 101 (417)
T ss_pred ceeeCCCC-------cccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHH-HhCCCCccceee--
Confidence 77888773 4556666665543 33320 1234799999999999999999977 777668888774
Q ss_pred EeccChhHHHHHHHHHHH-hcCC--CeEEec-CCCchhHHHHHHHhCCCcceeEecc------CCcCc--cccHHHHHHH
Q psy6266 82 QTLSGTGALRVGAEFLHR-ILNY--TTFYYS-KPTWENHRLVFLNAGFTEAREYRYW------NPEKR--AVDFTGMYED 149 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~-l~~g--d~V~i~-~P~y~~y~~~~~~~g~~~~~~~~~~------~~~~~--~~d~~~~~~~ 149 (218)
.|.|++.+++-++.++.- ...| ..|++| .|-|-.|.. +|+..-..+.+. .+..| ..||+.+.-
T Consensus 102 lTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d----~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i- 176 (417)
T COG3977 102 LTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYAD----AGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHI- 176 (417)
T ss_pred ecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccc----cccCccceeeccCCcccccccceeeccCHHHccc-
Confidence 999999999988876532 1123 345554 777877763 344112222221 11111 225555432
Q ss_pred HhcCCCCcEEEEcccCCCCcHH--------HHHHHhhcCeEEEeeCCceeec
Q psy6266 150 LVNAPDNSVIILHACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 150 l~~~~~~~~iil~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
.+..-.++.+-|.||||- ++.++|++|+|.+|-| -+|.
T Consensus 177 ----~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliID--nAYg 222 (417)
T COG3977 177 ----GESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIID--NAYG 222 (417)
T ss_pred ----ccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEe--cccC
Confidence 233445667899999996 6889999999999999 7775
No 222
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=98.80 E-value=2.4e-07 Score=82.55 Aligned_cols=158 Identities=17% Similarity=0.115 Sum_probs=111.5
Q ss_pred EeCCCCCccCchHHHHHHHHHhhc-CCCCc--cCcCC----CCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhH
Q psy6266 17 YRTEECKPWVLPVVRQAEKELAAD-DSLNH--EYLPV----LGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGA 89 (218)
Q Consensus 17 ~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~--~Y~~~----~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~a 89 (218)
|-|.-.....|..|.+|..+.... ....+ .|... .-+++.|+++++++.. . +.++| +-|.|.|++
T Consensus 25 ylD~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a-~-----~~~eI--vft~~tT~a 96 (405)
T COG0520 25 YLDNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNA-D-----SSDEI--VFTRGTTEA 96 (405)
T ss_pred EecCcccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCC-C-----CCCeE--EEeCChhHH
Confidence 434444445688888887765532 11122 12221 1357888888887753 1 12444 599999999
Q ss_pred HHHHHHHHHH-hcCCCeEEecCCCchhHH----HHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEccc
Q psy6266 90 LRVGAEFLHR-ILNYTTFYYSKPTWENHR----LVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHAC 164 (218)
Q Consensus 90 l~~~~~~l~~-l~~gd~V~i~~P~y~~y~----~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~ 164 (218)
+.+++..+.. +.+||+|++.+=-+++-. ...+..|+ +++.+|.. +...++.+.++..+ +++++++..+.
T Consensus 97 ln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga-~v~~i~~~--~~g~~~~~~~~~~i---~~~Tklvais~ 170 (405)
T COG0520 97 LNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGA-KVRVIPLD--DDGLLDLDALEKLI---TPKTKLVALSH 170 (405)
T ss_pred HHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCc-EEEEEecC--CCCCcCHHHHHHhc---CCCceEEEEEC
Confidence 9999887643 568999999988776644 23344588 89999874 34677888888866 36677777788
Q ss_pred CCCCcHH-----HHHHHhhcCeEEEeeCC
Q psy6266 165 AHNPTAQ-----QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 165 p~NPTG~-----~l~~l~~~~~i~ii~D~ 188 (218)
-+|-||. +|+++|++++++++.|+
T Consensus 171 vSn~tG~~~pv~~I~~la~~~ga~v~VDa 199 (405)
T COG0520 171 VSNVTGTVNPVKEIAELAHEHGALVLVDA 199 (405)
T ss_pred ccccccccchHHHHHHHHHHcCCEEEEEC
Confidence 8999998 89999999999999995
No 223
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.79 E-value=1.1e-07 Score=85.20 Aligned_cols=180 Identities=14% Similarity=0.031 Sum_probs=114.3
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
...|...||++-|.....-| ...|.|.+|..+.+++ ..+.|.+..+..+|++.++++.-+ .+++ +.
T Consensus 46 d~dG~~~lD~~~g~~~~~lG--h~~p~i~~a~~~~~~~--~~~~~~~~~~~~~la~~L~~~~~~--------~~~v--~~ 111 (426)
T PRK00062 46 DVDGNEYIDYVGSWGPMILG--HAHPEVVEAVIEAAEK--GLSFGAPTELEVELAELVIELVPS--------IEMV--RM 111 (426)
T ss_pred eCCCCEEEEcccchhhhhcC--CCCHHHHHHHHHHHHh--CCcCCCCCHHHHHHHHHHHHhCCC--------CCEE--EE
Confidence 46788999999886433455 3678888887776654 345577888888888888876422 2344 58
Q ss_pred eccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHh-CCC-----------cceeEeccCCcCccccHHHHHHHH
Q psy6266 83 TLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNA-GFT-----------EAREYRYWNPEKRAVDFTGMYEDL 150 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~-g~~-----------~~~~~~~~~~~~~~~d~~~~~~~l 150 (218)
|.+|++|...++++.......++|+..+++|..+...+... |.. .+..++.........|.+.+++.+
T Consensus 112 ~~sGseA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i 191 (426)
T PRK00062 112 VNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELF 191 (426)
T ss_pred ecCHHHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHH
Confidence 89999999998887544444789999999999986333221 100 000000000000012677777777
Q ss_pred hcCCCC-cEEEEcccCCC------CcHH--HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 151 VNAPDN-SVIILHACAHN------PTAQ--QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 151 ~~~~~~-~~iil~~~p~N------PTG~--~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
.+...+ ..+++-+-++| |.+. ++.++|++|++++|.| |+|.|+-++
T Consensus 192 ~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~D--Ev~~G~r~g 246 (426)
T PRK00062 192 EEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFD--EVMTGFRVA 246 (426)
T ss_pred HhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe--echhccccC
Confidence 542222 23444444554 1222 7999999999999999 999988443
No 224
>PRK02769 histidine decarboxylase; Provisional
Probab=98.78 E-value=1.5e-07 Score=83.19 Aligned_cols=113 Identities=18% Similarity=0.278 Sum_probs=88.4
Q ss_pred ceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCC
Q psy6266 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDN 156 (218)
Q Consensus 77 ~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 156 (218)
++....|.|||++...++.+.+.+.++++|++++-..++-...++..|. +.+.++.. + ...+|.+.+++.|.+...+
T Consensus 84 ~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~-~~~~V~~~-~-~g~id~~~L~~~i~~~~~~ 160 (380)
T PRK02769 84 ESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRI-KSRVITSL-P-NGEIDYDDLISKIKENKNQ 160 (380)
T ss_pred CCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCC-CCceeccC-C-CCcCcHHHHHHHHHhCCCC
Confidence 3334689999999766554333346789999999998888888888898 78888773 3 4568999999999764344
Q ss_pred cEEEEcccCCCCcHH-----HHHHHhhcCe---EEEeeCCceeecc
Q psy6266 157 SVIILHACAHNPTAQ-----QVAHMVDKHH---VYLLRSGRINMCG 194 (218)
Q Consensus 157 ~~iil~~~p~NPTG~-----~l~~l~~~~~---i~ii~D~r~~y~~ 194 (218)
++++..+..+|+||. +|.++|++++ +|+..| -++.+
T Consensus 161 t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVD--aA~gg 204 (380)
T PRK02769 161 PPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHAD--AALSG 204 (380)
T ss_pred cEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEE--ecccc
Confidence 667777789999998 8999999997 799999 66665
No 225
>PRK09064 5-aminolevulinate synthase; Validated
Probab=98.77 E-value=2.1e-07 Score=82.62 Aligned_cols=163 Identities=13% Similarity=0.022 Sum_probs=98.0
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCC-----ccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEE
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLN-----HEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFG 80 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-----~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~ 80 (218)
|.+++|++-=.| -| ....|.|++|..+.++..+.. ..|.+..-..+|++.++++. + . ++ .
T Consensus 45 ~~~~~~~~s~dy---lg-l~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~-g-~------~~-~-- 109 (407)
T PRK09064 45 EREVTVWCSNDY---LG-MGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLH-G-K------EA-A-- 109 (407)
T ss_pred CceEEEEECCCC---cC-CCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHh-C-C------Cc-E--
Confidence 357788776655 23 345677888877655431111 11333444677888888764 2 1 12 2
Q ss_pred EEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCC-CCcEE
Q psy6266 81 VQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAP-DNSVI 159 (218)
Q Consensus 81 ~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~~~~i 159 (218)
++...|.++...++.++....+++.|+.....+.+....++..+. +...++. .|++.+++.++... +++.+
T Consensus 110 ~~~~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~-~~~~~~~-------~d~~~le~~l~~~~~~~~~~ 181 (407)
T PRK09064 110 LVFTSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRC-EKHIFRH-------NDVAHLEELLAAADPDRPKL 181 (407)
T ss_pred EEECcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCC-cEEEECC-------CCHHHHHHHHHhccCCCCeE
Confidence 243444455454444442223666666665555555455565666 5444322 25666666665332 34556
Q ss_pred EEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 160 ILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 160 il~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
++..+++||||. +|.++|+++++++|.| |+|.
T Consensus 182 v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livD--Ea~~ 218 (407)
T PRK09064 182 IAFESVYSMDGDIAPIAEICDLADKYNALTYLD--EVHA 218 (407)
T ss_pred EEEeCCCCCCccccCHHHHHHHHHHcCCEEEEE--CCCc
Confidence 666789999996 8999999999999999 9987
No 226
>KOG1411|consensus
Probab=98.76 E-value=4e-09 Score=89.94 Aligned_cols=151 Identities=23% Similarity=0.322 Sum_probs=102.9
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCcCCCceE--EEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCc
Q psy6266 50 VLGLESFSSAATRMLLGGDASPPLREGRAF--GVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTE 127 (218)
Q Consensus 50 ~~G~~~lr~aia~~~~~~~~~~~~~~~~v~--~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~ 127 (218)
..|.+-|..+...++.| ++.|||. .+++..+.+|..+-+|+... -+-++..+|.++... ...-+++
T Consensus 260 ~~g~~~~laQSyAKNMG------LYgERvGa~svvc~~ad~A~rV~SQlk~l---iRpmYSnPP~hGArI---v~~Il~d 327 (427)
T KOG1411|consen 260 EDGHEILLAQSYAKNMG------LYGERVGALSVVCKDADEAKRVESQLKIL---IRPMYSNPPLHGARI---VATILSD 327 (427)
T ss_pred HcCCceEeehhhhhhcc------hhhhccceeEEEecCHHHHHHHHHHHHHH---hcccccCCCccchhh---hhhccCC
Confidence 33444444455555555 5567774 45778888899999886533 366788888877632 3333446
Q ss_pred ceeEeccCCcCccc--cHHHHHHHHhcC-----CCC-------cEEEEcccCCCCcHHHHHHHhhcCeEEEeeCCceeec
Q psy6266 128 AREYRYWNPEKRAV--DFTGMYEDLVNA-----PDN-------SVIILHACAHNPTAQQVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 128 ~~~~~~~~~~~~~~--d~~~~~~~l~~~-----~~~-------~~iil~~~p~NPTG~~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+..+..|..+...+ ++..++..|.+. .+. .+-++..+.-|| .|+..+.++++||+-.|||+.++
T Consensus 328 ~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~gs~~~W~hI~~QIGMF~fTgl~p--eQv~~l~ke~~iYmT~dGRiS~a 405 (427)
T KOG1411|consen 328 PDLKNQWLGEVKGMADRIISMRQQLFDALEKEGSPGNWSHITKQIGMFCFTGLNP--EQVDWLTKEYHIYLTKDGRISMA 405 (427)
T ss_pred hHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcCCCCccHHHHHHhhheeeecCCCH--HHHHHHHhhheeeeccCceEeec
Confidence 77777775544333 555666666542 111 123343444555 68889999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHcC
Q psy6266 194 GLTTQNLDHVAQAIHDAVTSI 214 (218)
Q Consensus 194 ~l~~~ni~~~~~a~~~~~~~~ 214 (218)
|++..|++|+|.||+++.++.
T Consensus 406 G~ss~nV~yLa~aih~vtk~~ 426 (427)
T KOG1411|consen 406 GLSSSNVPYLADAIHAVTKNT 426 (427)
T ss_pred cccccCCcccchhhHhHhcCC
Confidence 999999999999999997654
No 227
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=98.74 E-value=2.5e-07 Score=81.32 Aligned_cols=177 Identities=12% Similarity=0.071 Sum_probs=107.6
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
...|...||+.-|.....-| ...|.|.+|..+.++. ..+ ....+..+++..+++++.. ... .++ ++.
T Consensus 25 d~~G~~~lD~~s~~~~~~lG--~~~p~v~~a~~~~~~~--~~~--~~~~~~~~~~~~la~~l~~-~~~----~~~--~~~ 91 (377)
T PRK02936 25 DNNGKTYLDFTSGIAVCNLG--HCHPTVTKAVQEQLDD--IWH--VSNLFTNSLQEEVASLLAE-NSA----GDL--VFF 91 (377)
T ss_pred eCCCCEEEECCcchhhccCC--CCCHHHHHHHHHHHHh--ccc--cccccCCHHHHHHHHHHHh-cCC----CCE--EEE
Confidence 35678888887775222345 3578888887776643 111 2234567899999998865 321 133 458
Q ss_pred eccChhHHHHHHHHHHHhcCC-CeEEecCCCchhHHH-HHHHhCCCcce---eEeccCCcCc--cccHHHHHHHHhcCCC
Q psy6266 83 TLSGTGALRVGAEFLHRILNY-TTFYYSKPTWENHRL-VFLNAGFTEAR---EYRYWNPEKR--AVDFTGMYEDLVNAPD 155 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~g-d~V~i~~P~y~~y~~-~~~~~g~~~~~---~~~~~~~~~~--~~d~~~~~~~l~~~~~ 155 (218)
+.+|++|...++++... .+| ++|++.+++|..... .....+. ... ..+....-.. ..|++.+++.+. +
T Consensus 92 ~~sG~~a~~~A~~~a~~-~~g~~~vi~~~~~~Hg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~---~ 166 (377)
T PRK02936 92 CNSGAEANEAALKLARK-HTGKSKIVTFEQSFHGRTFGTMSATGQ-EKIKEGFGPLLPGFTHVPFNDIKALKEVMN---E 166 (377)
T ss_pred eCCcHHHHHHHHHHHHH-hcCCCeEEEECCCcCCCcHHhhhccCC-ccccccCCCCCCCceEeCCCCHHHHHHhcc---C
Confidence 89999999988875432 345 679999999874321 1222221 111 0111000000 116777777664 2
Q ss_pred CcEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccCCCCC
Q psy6266 156 NSVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGLTTQN 199 (218)
Q Consensus 156 ~~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l~~~n 199 (218)
+..+++..+.+|++|. +|.++|++|++++|.| |+|.++.+..
T Consensus 167 ~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~D--Ev~~g~g~~g 217 (377)
T PRK02936 167 EVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIID--EVQTGIGRTG 217 (377)
T ss_pred CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe--ccccCCCcCc
Confidence 3344444455565543 7999999999999999 9999886553
No 228
>PRK04311 selenocysteine synthase; Provisional
Probab=98.74 E-value=2.9e-07 Score=83.36 Aligned_cols=157 Identities=12% Similarity=0.056 Sum_probs=107.7
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCC---C--cHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVL---G--LESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~---G--~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
++||.+--++.+.-|..+.++.+.+|..+.... ....+|.... | ...+++.++++.-. +. .++
T Consensus 80 ~vinatg~v~~tNlg~s~l~~~v~eav~~~~~~-~~~le~~l~~g~~g~r~~~~e~~lA~l~Ga---------e~--a~v 147 (464)
T PRK04311 80 PVINATGVVLHTNLGRALLSEAAIEAVTEAARG-YSNLEYDLATGKRGSRDRALAALLCALTGA---------ED--ALV 147 (464)
T ss_pred ceecCCccEEeccCCCCCCCHHHHHHHHHHHhc-ccccccchhhcccchHHHHHHHHHHHHhCC---------Ce--EEE
Confidence 789988777888888888889999998877643 1222333221 2 25777777766532 22 357
Q ss_pred eccChhHHHHHHHHHHHhcCCCeEEecCCCchh------HHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCC
Q psy6266 83 TLSGTGALRVGAEFLHRILNYTTFYYSKPTWEN------HRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDN 156 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~------y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 156 (218)
+.+++.|+.+++.+ +.+||+|++++..+.. ....++..|+ +++.+... ...+.+.++++|. ++
T Consensus 148 v~sgtaAl~l~l~~---l~~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~-~l~~v~~~----~~t~~~dle~aI~---~~ 216 (464)
T PRK04311 148 VNNNAAAVLLALNA---LAAGKEVIVSRGELVEIGGAFRIPDVMRQAGA-RLVEVGTT----NRTHLRDYEQAIN---EN 216 (464)
T ss_pred ECCHHHHHHHHHHH---hCCCCEEEEcchhhhhcCcchhhHHHHHHCCc-EEEEECCC----CCCCHHHHHHhcC---cc
Confidence 77888888877754 4689999999864331 1234567788 88887542 1346777777775 34
Q ss_pred cEEEEcccCCCCc--H--H-----HHHHHhhcCeEEEeeC
Q psy6266 157 SVIILHACAHNPT--A--Q-----QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 157 ~~iil~~~p~NPT--G--~-----~l~~l~~~~~i~ii~D 187 (218)
+.+++...++||+ | . +|+++|++|+++++.|
T Consensus 217 TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD 256 (464)
T PRK04311 217 TALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYD 256 (464)
T ss_pred CeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEE
Confidence 5555556789993 4 2 7899999999999999
No 229
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=98.73 E-value=2.5e-07 Score=81.99 Aligned_cols=175 Identities=11% Similarity=0.100 Sum_probs=97.8
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ...|.|.+|.++.++.......+....-..+|-+.++++. + .+++ +.+
T Consensus 37 ~~G~~~lD~~~g~~~~~lG--h~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~--------~~~~--~~~ 103 (396)
T PRK04073 37 PEGNRYMDMLSAYSAVNQG--HRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLT-G--------KDMV--LPM 103 (396)
T ss_pred CCCCEEEEcCCCHHhccCC--CCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcC-C--------CCeE--EEc
Confidence 4566777776553222334 3467777776665543111111222222233333333321 1 1343 577
Q ss_pred ccChhHHHHHHHHHHHh-------cCC-CeEEecCCCchhHH-HHHHHhCCCcceeE---eccCCcCc---cccHHHHHH
Q psy6266 84 LSGTGALRVGAEFLHRI-------LNY-TTFYYSKPTWENHR-LVFLNAGFTEAREY---RYWNPEKR---AVDFTGMYE 148 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l-------~~g-d~V~i~~P~y~~y~-~~~~~~g~~~~~~~---~~~~~~~~---~~d~~~~~~ 148 (218)
.+|++|...++.+.+.. .+| ++|+..+-+|.... ..+...+. ..... +.. .... -.|++.+++
T Consensus 104 ~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~d~~~l~~ 181 (396)
T PRK04073 104 NTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSE-EEYKRGFGPML-PGIKKIPYGDLEALKA 181 (396)
T ss_pred CChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCC-cccccCCCCCC-CCceEeCCCCHHHHHH
Confidence 88899988887765432 134 67777766665433 23332221 11100 000 0000 116777777
Q ss_pred HHhcCCCCcEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 149 DLVNAPDNSVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 149 ~l~~~~~~~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
.+. ++..+++.++++||||. +|.++|++|++++|.| |+|.++...
T Consensus 182 ~i~---~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~D--Ev~~g~g~~ 235 (396)
T PRK04073 182 AIT---PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIAD--EIQTGLGRT 235 (396)
T ss_pred hcc---cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe--cchhCCCcC
Confidence 664 34566667789999996 6889999999999999 999987554
No 230
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.71 E-value=1.4e-07 Score=81.94 Aligned_cols=132 Identities=16% Similarity=0.188 Sum_probs=83.8
Q ss_pred ccC-cCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHH--hc--C----------CCeEEec
Q psy6266 45 HEY-LPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHR--IL--N----------YTTFYYS 109 (218)
Q Consensus 45 ~~Y-~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~--l~--~----------gd~V~i~ 109 (218)
..| .-..|+|+.|+-.++.+ + +++++| ..|++..+.+...++.. +. + .-+.+.|
T Consensus 62 RNY~G~l~Gipe~r~l~a~ll-g------v~~~~v----iv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCP 130 (425)
T PF12897_consen 62 RNYPGGLDGIPEARELFAELL-G------VPPENV----IVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCP 130 (425)
T ss_dssp TSS-S-SS--HHHHHHHHHHH-T------S-GGGE----EE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEE
T ss_pred cCCCCccCChHHHHHHHHHHh-C------CCHHHE----EEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEec
Confidence 369 89999999999888776 4 455664 35566666554443322 11 1 2467999
Q ss_pred CCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH--------HHHHH-hhcC
Q psy6266 110 KPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ--------QVAHM-VDKH 180 (218)
Q Consensus 110 ~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~--------~l~~l-~~~~ 180 (218)
.|+|--|..+.+..|. +.+.+|+. + .++|++.+++.+.+-+..+-+++++.++||||. +++.+ ....
T Consensus 131 vPGYDRHFai~E~~Gi-emi~VpM~-~--dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~ 206 (425)
T PF12897_consen 131 VPGYDRHFAITEHFGI-EMIPVPMT-E--DGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAP 206 (425)
T ss_dssp ES--HHHHHHHHHCT--EEEEEEEE-T--TEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SST
T ss_pred CCCchHHHHHHHhhCc-EEEecCCC-C--CCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCc
Confidence 9999999999999999 99999995 3 379999999988654444557888999999998 34444 1468
Q ss_pred eEEEeeCCceeec
Q psy6266 181 HVYLLRSGRINMC 193 (218)
Q Consensus 181 ~i~ii~D~r~~y~ 193 (218)
++-|+.| .+|.
T Consensus 207 DFRI~WD--NAY~ 217 (425)
T PF12897_consen 207 DFRIFWD--NAYA 217 (425)
T ss_dssp T-EEEEE---TTT
T ss_pred CeEEEee--cCce
Confidence 9999999 8886
No 231
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.70 E-value=6.7e-09 Score=89.74 Aligned_cols=132 Identities=26% Similarity=0.324 Sum_probs=90.3
Q ss_pred cCCCceEEEE--eccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccc--cHHHHHH
Q psy6266 73 LREGRAFGVQ--TLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAV--DFTGMYE 148 (218)
Q Consensus 73 ~~~~~v~~~~--t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~--d~~~~~~ 148 (218)
++.|||..+. +.-...+-.+..|+... -+..|..+|.|+... +... ++++.....|..+..++ ++..|+.
T Consensus 250 LYgERVGa~~vva~~~~~a~~v~sqlk~~---iR~~ySnPP~~Ga~v--va~I-L~~p~Lra~W~~El~~Mr~Ri~~mR~ 323 (396)
T COG1448 250 LYGERVGALSVVAEDAEEADRVLSQLKAI---IRTNYSNPPAHGAAV--VATI-LNNPELRAEWEQELEEMRQRILEMRQ 323 (396)
T ss_pred hhhhccceeEEEeCCHHHHHHHHHHHHHH---HHhccCCCchhhHHH--HHHH-hCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778886543 33344455555554332 378899999988754 3333 44788888887665444 5555555
Q ss_pred HHhcC-----CCCc--EEEEc---ccCCCCcHHHHHHHhhcCeEEEeeCCceeeccCCCCCHHHHHHHHHHH
Q psy6266 149 DLVNA-----PDNS--VIILH---ACAHNPTAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDA 210 (218)
Q Consensus 149 ~l~~~-----~~~~--~iil~---~~p~NPTG~~l~~l~~~~~i~ii~D~r~~y~~l~~~ni~~~~~a~~~~ 210 (218)
.+.+. ++++ ++.-| ++...-|-.|+.++.++|+||++.+||++.+|++.+|++++|+||.++
T Consensus 324 ~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gls~~QV~rLree~~IY~v~sGRi~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 324 ALVDALKALGAPRNFDFIISQRGMFSYTGLSPEQVDRLREEFGIYLVASGRINVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred HHHHHHHhhCCCcccchHhhcCceeecCCCCHHHHHHHHHhccEEEecCCeeeeccCChhhHHHHHHHHHhh
Confidence 44321 2222 22222 244455666999999999999999999999999999999999999876
No 232
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.69 E-value=1.5e-07 Score=84.67 Aligned_cols=119 Identities=15% Similarity=0.097 Sum_probs=84.8
Q ss_pred cCcCC--CCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHH---
Q psy6266 46 EYLPV--LGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVF--- 120 (218)
Q Consensus 46 ~Y~~~--~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~--- 120 (218)
.|+.. .-...|.+.++++..+ +. .+.+.+|+.|+..++.++ +.+||+|++++..|+.-...+
T Consensus 62 ~Ysr~~~p~~~~Le~~lA~l~g~---------~~--av~~sSG~aAi~~al~al--l~~Gd~Vv~~~~~y~~t~~~~~~~ 128 (436)
T PRK07812 62 IYTRIMNPTQDVVEQRIAALEGG---------VA--ALLLASGQAAETFAILNL--AGAGDHIVSSPRLYGGTYNLFHYT 128 (436)
T ss_pred cccCCCCchHHHHHHHHHHHhCC---------Ce--EEEEccHHHHHHHHHHHH--hCCCCEEEEeCCcchHHHHHHHHH
Confidence 46642 2346788888776533 11 357788899998888766 679999999998887754433
Q ss_pred -HHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeC
Q psy6266 121 -LNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 121 -~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D 187 (218)
...|+ +++.++ + ..|++.+++.+. +++.+++.-+|+||||. +|.++|+++++++|.|
T Consensus 129 l~~~Gi-~v~~vd----d--~~d~e~l~~ai~---~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~liVD 191 (436)
T PRK07812 129 LPKLGI-EVSFVE----D--PDDLDAWRAAVR---PNTKAFFAETISNPQIDVLDIPGVAEVAHEAGVPLIVD 191 (436)
T ss_pred hhcCeE-EEEEEC----C--CCCHHHHHHhCC---CCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEEE
Confidence 33565 555552 1 127788877774 44556666789999998 7999999999999999
No 233
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=98.68 E-value=5.1e-07 Score=80.81 Aligned_cols=141 Identities=16% Similarity=0.089 Sum_probs=97.0
Q ss_pred hHHHHH-HHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeE
Q psy6266 28 PVVRQA-EKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTF 106 (218)
Q Consensus 28 ~~v~~a-~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V 106 (218)
..+.++ ...+. . +...|..+....+|.+++++++-. +. ++.|.+|+.|+.+++.+. +.|||+|
T Consensus 50 ~aMs~~q~a~~~-~--GDe~yag~~s~~~lE~~va~~~G~---------~~--av~v~sGT~Al~ll~~l~--l~pGDeV 113 (450)
T TIGR02618 50 NAMSDKQWAGLM-M--GDEAYAGSRNFYHLERTVRELYGF---------KY--VVPTHQGRGAENLLSQIA--IKPGDYV 113 (450)
T ss_pred HHHHHHHHHHhh-h--cchhhcCCCcHHHHHHHHHHHHCC---------Ce--EEEcCCHHHHHHHHHHhC--CCCcCEE
Confidence 566665 22222 1 234699999999999999987632 22 468899999999876443 6799987
Q ss_pred EecCCCc-hhHHHHHHHhCCCcceeEecc--------CCcCccccHHHHHHHHhcCC-CC-cEEEEcccCCCCc-HH---
Q psy6266 107 YYSKPTW-ENHRLVFLNAGFTEAREYRYW--------NPEKRAVDFTGMYEDLVNAP-DN-SVIILHACAHNPT-AQ--- 171 (218)
Q Consensus 107 ~i~~P~y-~~y~~~~~~~g~~~~~~~~~~--------~~~~~~~d~~~~~~~l~~~~-~~-~~iil~~~p~NPT-G~--- 171 (218)
++|+| ..+...++..|+ .++.++.. .+..+.+|++.+++.|+... ++ +.+.+ ..++|-. |.
T Consensus 114 --psn~~f~Tt~ahIe~~Ga-v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~-e~t~N~~GG~pvs 189 (450)
T TIGR02618 114 --PGNMYFTTTRYHQEKNGA-TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICL-AVTVNLAGGQPVS 189 (450)
T ss_pred --CCceeHHHHHHHHHhCCe-EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEE-EEecccCCCeeCC
Confidence 77887 556666788888 77776431 12335679999999997531 12 22233 3356644 43
Q ss_pred -----HHHHHhhcCeEEEeeCC
Q psy6266 172 -----QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 172 -----~l~~l~~~~~i~ii~D~ 188 (218)
++.++|++|++.++.|+
T Consensus 190 ~~~l~~I~elA~~~Gl~vi~Da 211 (450)
T TIGR02618 190 MANMREVRELCEAHGIKVFYDA 211 (450)
T ss_pred HHHHHHHHHHHHHcCCEEEEEc
Confidence 78999999999999998
No 234
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=98.66 E-value=9.8e-07 Score=79.73 Aligned_cols=157 Identities=10% Similarity=0.036 Sum_probs=106.4
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCC---CC--cHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPV---LG--LESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~---~G--~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
.+||.+--++.+.-|..+.++.+.+|..+..+. ....+|.-. .| ...+++.++++.-. +. .++
T Consensus 75 ~vinatg~v~~tNlg~s~l~~~vieAv~~~~~~-y~~l~~~l~~g~~g~r~~~le~~lA~l~ga---------e~--alv 142 (454)
T TIGR00474 75 RVINATGVVLHTNLGRAPLAEEAIEAVTDAARG-YSNLEYDLETGKRGSRYSHVEGLLCELTGA---------ED--ALV 142 (454)
T ss_pred ceeCCCCcEEeccCCCCCCCHHHHHHHHHHHhc-ccchhccccccccchHHHHHHHHHHHHhCC---------Cc--EEE
Confidence 678877556777777777789999998877643 122233221 12 36788888876533 11 246
Q ss_pred eccChhHHHHHHHHHHHhcCCCeEEecCCCchhH------HHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCC
Q psy6266 83 TLSGTGALRVGAEFLHRILNYTTFYYSKPTWENH------RLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDN 156 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y------~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 156 (218)
+.+++.|+.+++.+ +.+||+|++++-.++.| ...++..|+ +++.++.. ...+.+.+++++. ++
T Consensus 143 v~sg~aAi~l~l~~---l~~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~-~~~~v~~~----~~~~l~dle~aI~---~~ 211 (454)
T TIGR00474 143 VNNNAAAVLLALNT---LAKGKEVIVSRGELVEIGGSFRIPDVMEQSGA-KLVEVGTT----NRTHLKDYEDAIT---EN 211 (454)
T ss_pred ECCHHHHHHHHHHH---hCCcCEEEECCChhhhhcchhhHHHHHHHcCC-EEEEeCCC----CCCCHHHHHHhcC---cC
Confidence 67777788776644 46899999998765433 234566788 78777542 1246777877774 44
Q ss_pred cEEEEcccCCCCc--HH-------HHHHHhhcCeEEEeeC
Q psy6266 157 SVIILHACAHNPT--AQ-------QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 157 ~~iil~~~p~NPT--G~-------~l~~l~~~~~i~ii~D 187 (218)
+.+++...++||+ |. +|+++|++|+++++.|
T Consensus 212 T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD 251 (454)
T TIGR00474 212 TALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMED 251 (454)
T ss_pred CEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEE
Confidence 5555556789996 42 7999999999999999
No 235
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.64 E-value=3.1e-07 Score=82.67 Aligned_cols=121 Identities=17% Similarity=0.133 Sum_probs=85.0
Q ss_pred ccCcCCC--CcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHH----H
Q psy6266 45 HEYLPVL--GLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHR----L 118 (218)
Q Consensus 45 ~~Y~~~~--G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~----~ 118 (218)
..|+-.. -...|++.++++..+ . . .+.+.+|+.|+.+++..+ +.+||+|++++..|++.. .
T Consensus 61 ~~Y~r~~~pt~~~le~~la~l~g~-~-------~---~v~fsSG~~Ai~~al~~l--l~~Gd~VI~~~~~y~~t~~~~~~ 127 (437)
T PRK05613 61 PIYSRLTNPTVEALENRIASLEGG-V-------H---AVAFASGQAAETAAILNL--AGAGDHIVTSPRLYGGTETLFLV 127 (437)
T ss_pred ceeeCccChHHHHHHHHHHHHhCC-C-------e---EEEeCCHHHHHHHHHHHh--cCCCCEEEECCCccHHHHHHHHH
Confidence 3465432 246777777776532 1 1 346677778887766655 678999999999999764 3
Q ss_pred HHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCC
Q psy6266 119 VFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 119 ~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~ 188 (218)
.++..|+ +++.++. . .|.+.+++.|+ +++.+++..++.||||. +|.++|+++++.++.|+
T Consensus 128 ~l~~~Gi-~v~~vd~--~----~d~e~l~~~l~---~~tk~V~~e~~~Np~~~v~di~~I~~la~~~gi~livD~ 192 (437)
T PRK05613 128 TLNRLGI-EVTFVEN--P----DDPESWQAAVQ---PNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIVDN 192 (437)
T ss_pred HHHhcCe-EEEEECC--C----CCHHHHHHhCC---ccCeEEEEECCCCCCCcccCHHHHHHHHHHcCCeEEEEC
Confidence 3466788 7777741 1 26777887775 34545555689999996 79999999999999993
No 236
>PLN03032 serine decarboxylase; Provisional
Probab=98.64 E-value=7.8e-07 Score=78.48 Aligned_cols=116 Identities=14% Similarity=0.152 Sum_probs=87.5
Q ss_pred CCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC
Q psy6266 74 REGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA 153 (218)
Q Consensus 74 ~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 153 (218)
+++++..+.|.|||+|...++.+.+...++..|+++.-..++....++..|. .+..+|.. . ...+|++.+++.|++.
T Consensus 82 ~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~-~~~~V~~d-~-~g~id~~~L~~~i~~~ 158 (374)
T PLN03032 82 EKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRM-EAVKVPTL-P-SGEIDYDDLERALAKN 158 (374)
T ss_pred CCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCC-CCeEeeeC-C-CCcCcHHHHHHHHHHc
Confidence 3444434689999999887766543233566888888888888888888888 88888873 3 4678999999999754
Q ss_pred CCCcEEEEcccCCCCcHH-----HHHHHhhcCe-----EEEeeCCceeecc
Q psy6266 154 PDNSVIILHACAHNPTAQ-----QVAHMVDKHH-----VYLLRSGRINMCG 194 (218)
Q Consensus 154 ~~~~~iil~~~p~NPTG~-----~l~~l~~~~~-----i~ii~D~r~~y~~ 194 (218)
+.++++++.+..+|+||. +|+++|++++ +|+..| -++.+
T Consensus 159 ~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvD--aA~gg 207 (374)
T PLN03032 159 RDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCD--GALFG 207 (374)
T ss_pred CCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEE--ccchh
Confidence 334566666678999998 8999999985 699999 66554
No 237
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=98.62 E-value=8.2e-07 Score=78.58 Aligned_cols=177 Identities=15% Similarity=0.111 Sum_probs=98.2
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ...|.|.+|..+.++......+.....-..++++.+++. ++ . +++ +.+
T Consensus 28 ~dg~~~lD~~~~~~~~~~G--h~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~------~--~~~--~~~ 94 (400)
T PTZ00125 28 VEGKKYYDFLSAYSAVNQG--HCHPKILAALINQAQKLTLTSRAFYNDVLGLAEKYITDL-FG------Y--DKV--LPM 94 (400)
T ss_pred CCCCEEEEcccCHhhccCC--cCCHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHhC-CC------C--CEE--EEe
Confidence 4577778886664322233 357788888776654311111111122223333333322 12 1 333 477
Q ss_pred ccChhHHHHHHHHHHHh--------cCCCeEEecCCCchhHHHHHHHhCCCcceeEec---cCCc---CccccHHHHHHH
Q psy6266 84 LSGTGALRVGAEFLHRI--------LNYTTFYYSKPTWENHRLVFLNAGFTEAREYRY---WNPE---KRAVDFTGMYED 149 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l--------~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~---~~~~---~~~~d~~~~~~~ 149 (218)
.+|++|...++.+.... ...+.|++.+-+|............ ....+.. +... ....|++.+++.
T Consensus 95 ~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~le~~ 173 (400)
T PTZ00125 95 NSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSAST-DPKCYNNFGPFVPGFELVDYNDVEALEKL 173 (400)
T ss_pred CCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcC-CcchhccCCCCCCCceEeCCCCHHHHHHH
Confidence 78888888877755321 1247788888776664422222211 1111110 0000 001278888888
Q ss_pred HhcCCCCcEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 150 LVNAPDNSVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 150 l~~~~~~~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
+.. ++..+++..+++||||. +|.++|++|++++|.| ++|.++.+.
T Consensus 174 l~~--~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~D--ev~~g~g~~ 227 (400)
T PTZ00125 174 LQD--PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVD--EIQTGLGRT 227 (400)
T ss_pred hCC--CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe--ccccCCCcc
Confidence 752 33445555678999996 6889999999999999 999887543
No 238
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=98.62 E-value=1.6e-06 Score=77.07 Aligned_cols=163 Identities=12% Similarity=-0.003 Sum_probs=101.3
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCC-CCccCcCCCC----cHHHHHHHHHHhcCCCCCCCcCCCceEE
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDS-LNHEYLPVLG----LESFSSAATRMLLGGDASPPLREGRAFG 80 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~~Y~~~~G----~~~lr~aia~~~~~~~~~~~~~~~~v~~ 80 (218)
|.+.|+++--.|- | +...|.|++|.++.++.-+ ....+....| ..+|.+.+++++-. +..
T Consensus 44 ~~~~~~~~sn~yl---g-l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~---------~~~-- 108 (406)
T PRK13393 44 PREVTVWCSNDYL---G-MGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGK---------EAA-- 108 (406)
T ss_pred CccEEEeeccccc---C-CCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCC---------CcE--
Confidence 3577888777663 2 3446778877766664311 1111112223 35666666665421 222
Q ss_pred EEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC-CCCcEE
Q psy6266 81 VQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA-PDNSVI 159 (218)
Q Consensus 81 ~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~i 159 (218)
+.+++|+.|...++.++....+||.|+..+..++.....++..|+ +++.++. .|.+.+++.+... ++++.+
T Consensus 109 ~~~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~-~~~~~~~-------~d~~~l~~~l~~~~~~~~~~ 180 (406)
T PRK13393 109 LLFTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRA-EKRIFRH-------NDPADLERKLSDLDPHRPKL 180 (406)
T ss_pred EEeCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCC-eEEEeCC-------CCHHHHHHHHHhccCCCCEE
Confidence 344555567777666553233688777777777777767777777 6655532 2555666656433 234556
Q ss_pred EEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 160 ILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 160 il~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
++..+++||||. +|.++|++++++++.| +++.
T Consensus 181 v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livD--ea~~ 217 (406)
T PRK13393 181 VAFESVYSMDGDIAPIAEICDVAEKHGAMTYLD--EVHA 217 (406)
T ss_pred EEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEE--CCcc
Confidence 666789999997 7999999999999999 8876
No 239
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=98.54 E-value=1.5e-06 Score=77.47 Aligned_cols=174 Identities=13% Similarity=0.076 Sum_probs=102.5
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCc--CCCCcHHHHHHHHHHhcCCCCCCCcCCCceEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYL--PVLGLESFSSAATRMLLGGDASPPLREGRAFG 80 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~--~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~ 80 (218)
-..|...||+.-|.....-| ...|.|.+|.++.++. ..+... ......+|.+.+++.. + .+++
T Consensus 35 d~dG~~~lD~~~g~~~~~lG--h~~p~v~~A~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~-~--------~~~v-- 99 (406)
T PRK12381 35 DQQGKEYIDFAGGIAVNALG--HAHPALREALNEQASK--FWHTGNGYTNEPVLRLAKKLIDAT-F--------ADRV-- 99 (406)
T ss_pred eCCCCEEEEcCcCHhhccCC--CCCHHHHHHHHHHHhh--cccccCccCCHHHHHHHHHHHhhC-C--------CCeE--
Confidence 35677888886664333455 3367788777665532 111111 1111233444444322 1 1344
Q ss_pred EEeccChhHHHHHHHHHHHhc------CCCeEEecCCCchhHHHHHHHhCCCcceeEecc---CCc---CccccHHHHHH
Q psy6266 81 VQTLSGTGALRVGAEFLHRIL------NYTTFYYSKPTWENHRLVFLNAGFTEAREYRYW---NPE---KRAVDFTGMYE 148 (218)
Q Consensus 81 ~~t~G~~~al~~~~~~l~~l~------~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~---~~~---~~~~d~~~~~~ 148 (218)
+.+.+|++|...++++.+... +.+.|+..+++|.........++. .+....-+ .+. ....|++.+++
T Consensus 100 ~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 178 (406)
T PRK12381 100 FFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGG-QPKYSQDFAPLPPDIRHAAYNDLNSASA 178 (406)
T ss_pred EEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcC-CcccccCCCCCCCCeeEeCCCCHHHHHH
Confidence 588899999998888654331 357899999999887654333333 22111000 000 01126777777
Q ss_pred HHhcCCCCcEEEEcccCCCCcHH----------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 149 DLVNAPDNSVIILHACAHNPTAQ----------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 149 ~l~~~~~~~~iil~~~p~NPTG~----------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
.+. ++..+++. .|.||+|. +|.++|++|++++|.| |+|.++.+.
T Consensus 179 ~l~---~~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~D--Ev~tG~gr~ 232 (406)
T PRK12381 179 LID---DQTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFD--EVQTGVGRT 232 (406)
T ss_pred hcc---CCeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEc--chhhCCCCC
Confidence 774 23334443 58999874 7999999999999999 999988443
No 240
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=98.53 E-value=2.8e-06 Score=75.52 Aligned_cols=108 Identities=10% Similarity=0.067 Sum_probs=77.3
Q ss_pred CCCceEEEEeccChhHHHHHHHHHHHhcCC---CeEEecCCCchhHHH----HHHHhCCCcc----eeEeccCCcCcccc
Q psy6266 74 REGRAFGVQTLSGTGALRVGAEFLHRILNY---TTFYYSKPTWENHRL----VFLNAGFTEA----REYRYWNPEKRAVD 142 (218)
Q Consensus 74 ~~~~v~~~~t~G~~~al~~~~~~l~~l~~g---d~V~i~~P~y~~y~~----~~~~~g~~~~----~~~~~~~~~~~~~d 142 (218)
++++| +.|.|+++++.+++..+ +.++ +.|++.+..|++-.. ..+..|+ ++ +.++. .+...++
T Consensus 85 ~~~~v--~~~~~~t~~l~~~~~~~--~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~-~~~~~~~~~~~--~~~g~~~ 157 (406)
T TIGR01814 85 KEDEV--VVMNTLTINLHLLLASF--YKPTPKRYKILLEAKAFPSDHYAIESQLQLHGL-TVEESMVQIEP--REEETLR 157 (406)
T ss_pred CCCcE--EEeCCchHHHHHHHHHh--cCCcCCccEEEecCCCCChHHHHHHHHHHhcCC-CcccceEEecc--CCCCccC
Confidence 45665 58899999999988765 4554 368888899987222 2345677 66 23332 2234568
Q ss_pred HHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCC
Q psy6266 143 FTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 143 ~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~ 188 (218)
++.+++.++..++++.++.....+|.||. +|.++|++++++++.|+
T Consensus 158 ~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~ 208 (406)
T TIGR01814 158 LEDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDL 208 (406)
T ss_pred HHHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEc
Confidence 88888877644456666666789999998 79999999999999995
No 241
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=98.46 E-value=5e-06 Score=72.89 Aligned_cols=157 Identities=18% Similarity=0.116 Sum_probs=104.2
Q ss_pred EeCCCCCccCchHHHHHHHHHhhcCCCCc---cCcC----CCCcHHHHHHHHHHhcCCCCCCCcCC-CceEEEEeccChh
Q psy6266 17 YRTEECKPWVLPVVRQAEKELAADDSLNH---EYLP----VLGLESFSSAATRMLLGGDASPPLRE-GRAFGVQTLSGTG 88 (218)
Q Consensus 17 ~~~~~~~~~~~~~v~~a~~~~~~~~~~~~---~Y~~----~~G~~~lr~aia~~~~~~~~~~~~~~-~~v~~~~t~G~~~ 88 (218)
|-|..|.-+.|+.|.++..+...+..... .|.. ..-+.+.|+.+++++.. ++ ++| +.|.+++.
T Consensus 2 Yld~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~-------~~~~~v--~~~~~~t~ 72 (371)
T PF00266_consen 2 YLDNAGTGPMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGA-------PPDEEV--VFTSNGTE 72 (371)
T ss_dssp EEBTSSS-B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTS-------STTEEE--EEESSHHH
T ss_pred EeeCCCccCCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCC-------cccccc--ccccccch
Confidence 44555556789999998877654310100 0111 11245777888877643 22 343 58889999
Q ss_pred HHHHHHHHHHH-hcCCCeEEecCCCchhHHH----HHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcc
Q psy6266 89 ALRVGAEFLHR-ILNYTTFYYSKPTWENHRL----VFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 89 al~~~~~~l~~-l~~gd~V~i~~P~y~~y~~----~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~ 163 (218)
++..++..+.. +.+||+|++.+=.|++-.. +.+..|+ ++..++.. . ...+|.+.+.+.|. +++.++...
T Consensus 73 a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~-~v~~i~~~-~-~~~~~~~~~~~~l~---~~~~lv~~~ 146 (371)
T PF00266_consen 73 ALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGA-EVRVIPAD-P-GGSLDLEDLEEALN---PDTRLVSIS 146 (371)
T ss_dssp HHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTE-EEEEEEEG-T-TSSCSHHHHHHHHH---TTESEEEEE
T ss_pred hhhhhhhccccccccccccccccccccccccccccccccchh-hhcccccc-c-cchhhhhhhhhhhc---cccceEEee
Confidence 99998887632 5789999999999888662 2234577 78778763 2 34679999999996 334444444
Q ss_pred cCCCCcHH-----HHHHHhhcCeEEEeeCC
Q psy6266 164 CAHNPTAQ-----QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 164 ~p~NPTG~-----~l~~l~~~~~i~ii~D~ 188 (218)
-.+|-||. +|.++|++++++++.|+
T Consensus 147 ~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~ 176 (371)
T PF00266_consen 147 HVENSTGVRNPIEEIAKLAHEYGALLVVDA 176 (371)
T ss_dssp SBETTTTBBSSHHHHHHHHHHTTSEEEEE-
T ss_pred cccccccEEeeeceehhhhhccCCceeEec
Confidence 55678887 79999999999999994
No 242
>KOG1549|consensus
Probab=98.45 E-value=8.7e-06 Score=71.95 Aligned_cols=161 Identities=11% Similarity=0.028 Sum_probs=115.9
Q ss_pred CCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhc-CCC-Ccc-C--cCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEE
Q psy6266 6 GEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAAD-DSL-NHE-Y--LPVLGLESFSSAATRMLLGGDASPPLREGRAFG 80 (218)
Q Consensus 6 ~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~-~~~-~~~-Y--~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~ 80 (218)
|.+.+.|-.|. ..+.++.|-+|+...... -+. +.. | -+-.+++.-|+.+|+++.. . +.+|
T Consensus 41 ~~~~vyld~~a------t~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInA-d------~~dI-- 105 (428)
T KOG1549|consen 41 GTRPVYLDNQA------TGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINA-D------PSDI-- 105 (428)
T ss_pred CCccEEEecCc------CCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCC-C------CCcE--
Confidence 34566666664 347789999998876644 111 111 2 2234488899999988865 2 2344
Q ss_pred EEeccChhHHHHHHHHHHHhcCCC----eEEecCCCchhHHH---HHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC
Q psy6266 81 VQTLSGTGALRVGAEFLHRILNYT----TFYYSKPTWENHRL---VFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA 153 (218)
Q Consensus 81 ~~t~G~~~al~~~~~~l~~l~~gd----~V~i~~P~y~~y~~---~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 153 (218)
+-|.|+|+++.++++... +.++| .|+...--+++... ..+..|+ +++.+|.- +..-.|.+.+++.|+
T Consensus 106 iFts~ATEs~Nlvl~~v~-~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~-~Vt~lpv~--~~~~~d~~~~~~~i~-- 179 (428)
T KOG1549|consen 106 VFTSGATESNNLVLKGVA-RFFGDKTKKHIITLQTEHPCVLDSCRALQEEGL-EVTYLPVE--DSGLVDISKLREAIR-- 179 (428)
T ss_pred EEeCCchHHHHHHHHHhh-ccccccccceEEEecccCcchhHHHHHHHhcCe-EEEEeccC--ccccccHHHHHHhcC--
Confidence 599999999999988764 44678 89999888888664 3455688 89999883 345569999999996
Q ss_pred CCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCC
Q psy6266 154 PDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 154 ~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~ 188 (218)
++++++.+..-+|=+|. +|.++|++++|+++.|.
T Consensus 180 -~~T~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~Da 218 (428)
T KOG1549|consen 180 -SKTRLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDA 218 (428)
T ss_pred -CCceEEEEEecccCccccccHHHHHHHhCcCCcEEEeeh
Confidence 45555555566777887 89999999999999993
No 243
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=98.45 E-value=1.6e-06 Score=76.31 Aligned_cols=124 Identities=19% Similarity=0.111 Sum_probs=89.4
Q ss_pred EEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHH--HHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCc
Q psy6266 80 GVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHR--LVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNS 157 (218)
Q Consensus 80 ~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~--~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~ 157 (218)
.+++.+|+.++..+...+ +.|||+|++..=++..+. .+++..|+ +++.+.. +-...++++.+++.|++.++.+
T Consensus 59 ~ll~gsGt~amEAav~sl--~~pgdkVLv~~nG~FG~R~~~ia~~~g~-~v~~~~~--~wg~~v~p~~v~~~L~~~~~~~ 133 (383)
T COG0075 59 VLLSGSGTLAMEAAVASL--VEPGDKVLVVVNGKFGERFAEIAERYGA-EVVVLEV--EWGEAVDPEEVEEALDKDPDIK 133 (383)
T ss_pred EEEcCCcHHHHHHHHHhc--cCCCCeEEEEeCChHHHHHHHHHHHhCC-ceEEEeC--CCCCCCCHHHHHHHHhcCCCcc
Confidence 467778888888877655 679999999988877754 68899999 8888765 2234679999999998544444
Q ss_pred EEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccCCCCCHHHHHHHHHHHHH
Q psy6266 158 VIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDAVT 212 (218)
Q Consensus 158 ~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l~~~ni~~~~~a~~~~~~ 212 (218)
.+.+. -+--+||. .|++++++|+.++|.| +.+.+--..++-+.|-++-+++
T Consensus 134 ~V~~v-H~ETSTGvlnpl~~I~~~~k~~g~l~iVD---aVsS~Gg~~~~vd~wgiDv~it 189 (383)
T COG0075 134 AVAVV-HNETSTGVLNPLKEIAKAAKEHGALLIVD---AVSSLGGEPLKVDEWGIDVAIT 189 (383)
T ss_pred EEEEE-eccCcccccCcHHHHHHHHHHcCCEEEEE---ecccCCCcccchhhcCccEEEe
Confidence 44433 12336676 8999999999999999 5555555566666665554444
No 244
>PRK07505 hypothetical protein; Provisional
Probab=98.42 E-value=4.9e-06 Score=73.89 Aligned_cols=159 Identities=10% Similarity=0.011 Sum_probs=89.5
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcC------CCCcHHHHHHHHHHhcCCCCCCCcCCCc
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLP------VLGLESFSSAATRMLLGGDASPPLREGR 77 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~~~~~~~~~~ 77 (218)
..|...||++-..| -| ....|.|.+|.++.++.. ....+.. ..-..+|++.++++. + . +
T Consensus 43 ~~g~~~ld~~s~~~---lg-l~~~p~v~~A~~~~l~~~-g~~~~~~~~~~~~~~~~~~l~~~la~~~-~------~--~- 107 (402)
T PRK07505 43 ADGHTFVNFVSCSY---LG-LDTHPAIIEGAVDALKRT-GSLHLSSSRTRVRSQILKDLEEALSELF-G------A--S- 107 (402)
T ss_pred cCCceEEEeecCCc---cC-CCCCHHHHHHHHHHHHHh-CCCCCCccchhhhhHHHHHHHHHHHHHh-C------C--C-
Confidence 45788889865432 23 255777888876655431 1111111 223456666666553 2 1 2
Q ss_pred eEEEEeccChhHHHHHHHHHHH-hcC-CC-eEEecCCCchh----HHHHHHHhCCCcceeEeccCCcCccccHHHHHHHH
Q psy6266 78 AFGVQTLSGTGALRVGAEFLHR-ILN-YT-TFYYSKPTWEN----HRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDL 150 (218)
Q Consensus 78 v~~~~t~G~~~al~~~~~~l~~-l~~-gd-~V~i~~P~y~~----y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l 150 (218)
. +.++++++|...++.++.. +.+ |+ .|++.+..|.. +....+ .+. +++.+|. .|++.+++.+
T Consensus 108 ~--~~~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~-~~~-~v~~~~~-------~d~~~l~~~~ 176 (402)
T PRK07505 108 V--LTFTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICA-DET-EVETIDH-------NDLDALEDIC 176 (402)
T ss_pred E--EEECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhh-cCC-eEEEeCC-------CCHHHHHHHH
Confidence 2 2344455566555543321 112 33 36677755432 111111 234 4555543 2778888777
Q ss_pred hcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 151 VNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 151 ~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
.. ++.+++.++|+||||. +|.++|+++++++|.| |+|.
T Consensus 177 ~~---~~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~D--Ea~~ 219 (402)
T PRK07505 177 KT---NKTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYID--DAHG 219 (402)
T ss_pred hc---CCCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEE--Cccc
Confidence 53 2233444679999997 8999999999999999 8874
No 245
>PRK08114 cystathionine beta-lyase; Provisional
Probab=98.41 E-value=3e-06 Score=75.29 Aligned_cols=96 Identities=7% Similarity=0.035 Sum_probs=73.0
Q ss_pred EEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHH----HHhCCCcceeEeccCCcCccccHHHHHHHHhcCCC
Q psy6266 80 GVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVF----LNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPD 155 (218)
Q Consensus 80 ~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~----~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 155 (218)
++.+.+|+.|+..++..+ +.+||+|++++..|++-...+ +..|. ++..++. .|.+.+++.|+ +
T Consensus 80 a~~~~SGmaAi~~~~~~l--l~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi-~v~~vd~-------~d~~~l~~~l~---~ 146 (395)
T PRK08114 80 CALYPCGAAAVANAILAF--VEQGDHVLMTGTAYEPTQDFCSKILSKLGV-TTTWFDP-------LIGADIAKLIQ---P 146 (395)
T ss_pred EEEEhHHHHHHHHHHHHH--cCCCCEEEEeCCCcHHHHHHHHHHHHhcCc-EEEEECC-------CCHHHHHHhcC---C
Confidence 468888999999888766 689999999988886655444 44576 6666532 25677887775 3
Q ss_pred CcEEEEcccCCCCcHH-----HHHHHhhcC--eEEEeeCC
Q psy6266 156 NSVIILHACAHNPTAQ-----QVAHMVDKH--HVYLLRSG 188 (218)
Q Consensus 156 ~~~iil~~~p~NPTG~-----~l~~l~~~~--~i~ii~D~ 188 (218)
+++++..-+|.||||. +|+++|+++ +++++.|+
T Consensus 147 ~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g~~lvVDn 186 (395)
T PRK08114 147 NTKVVFLESPGSITMEVHDVPAIVAAVRSVNPDAVIMIDN 186 (395)
T ss_pred CceEEEEECCCCCCCEeecHHHHHHHHHHhCCCCEEEEEC
Confidence 4566666799999997 789999997 49999993
No 246
>PLN02263 serine decarboxylase
Probab=98.37 E-value=8.2e-06 Score=73.75 Aligned_cols=137 Identities=13% Similarity=0.085 Sum_probs=99.1
Q ss_pred CcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeE
Q psy6266 52 GLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREY 131 (218)
Q Consensus 52 G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~ 131 (218)
+..++=+.+.+|+.. --+ +.++.....+|.|||++.-.++.+-+...+.-.+++++-+..+....++..|+ +++.+
T Consensus 130 ~s~~~E~~Vi~wla~-L~g--~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi-~~~~V 205 (470)
T PLN02263 130 HSRQFEVGVLDWFAR-LWE--IEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRM-ECVKV 205 (470)
T ss_pred hHHHHHHHHHHHHHH-HhC--CCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCC-cceEe
Confidence 344555555555522 111 22323335789999999887776544433445789999999999999999999 89999
Q ss_pred eccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeE-----EEeeCCceeeccCC
Q psy6266 132 RYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHV-----YLLRSGRINMCGLT 196 (218)
Q Consensus 132 ~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i-----~ii~D~r~~y~~l~ 196 (218)
|.. +.+.+|.+.++++|.+...+.++++-+.+.-+||. +|.++|+++++ |+-.| -+|.|+.
T Consensus 206 p~d--~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVD--AA~GG~~ 276 (470)
T PLN02263 206 DTL--VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCD--GALFGLM 276 (470)
T ss_pred ccC--CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEe--ccchhhH
Confidence 873 35689999999999764444566665667779998 89999999886 99999 7887753
No 247
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=98.37 E-value=1.1e-05 Score=72.60 Aligned_cols=111 Identities=14% Similarity=0.110 Sum_probs=84.1
Q ss_pred ceEEEEeccChhHHHHHHHHHHH-h-----cCC-----CeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHH
Q psy6266 77 RAFGVQTLSGTGALRVGAEFLHR-I-----LNY-----TTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTG 145 (218)
Q Consensus 77 ~v~~~~t~G~~~al~~~~~~l~~-l-----~~g-----d~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~ 145 (218)
++...+|.|||+|..+++.+.+. . ..| ..|++++-..++....++..|+ +++.+|.. ++...+|.+.
T Consensus 101 ~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~-~v~~i~~d-~~~~~vd~~~ 178 (431)
T TIGR01788 101 EAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDV-ELREVPMD-PGRYVIDPEQ 178 (431)
T ss_pred CCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCc-eeEEEecC-CCceeeCHHH
Confidence 45556799999998887654321 1 112 3688888888888888888898 88888873 3334679999
Q ss_pred HHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcC------eEEEeeCCceeecc
Q psy6266 146 MYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKH------HVYLLRSGRINMCG 194 (218)
Q Consensus 146 ~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~------~i~ii~D~r~~y~~ 194 (218)
+++.|.+ .++++...-.+|.||. +|+++|+++ ++|+..| -+|.+
T Consensus 179 L~~~i~~---~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvD--aaq~g 233 (431)
T TIGR01788 179 VVEAVDE---NTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVD--AASGG 233 (431)
T ss_pred HHHHHhh---CCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEe--cccHH
Confidence 9999964 3455655678999998 899999999 9999999 78775
No 248
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=98.36 E-value=1.3e-05 Score=71.77 Aligned_cols=183 Identities=13% Similarity=0.097 Sum_probs=102.4
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ...+.|.+|..+.+++ ..+.+.+..+.+... ++++++.. ..+... .+++ .+.+
T Consensus 38 ~dG~~~lD~~~g~~~~~lG--h~~~~i~~a~~~~~~~--~~~~~~~~~~~~~~~-~la~~l~~-~~~~~~-~~~~-~f~~ 109 (425)
T PRK08088 38 VEGREYLDFAGGIAVLNTG--HLHPKVVAAVEAQLKK--LSHTCFQVLAYEPYL-ELCEKMNQ-KVPGDF-AKKT-LLVT 109 (425)
T ss_pred CCCCEEEEcCCchhhcCCC--CCCHHHHHHHHHHHhh--CCCccccccCCHHHH-HHHHHHHH-hCCCCC-CCEE-EEeC
Confidence 4577778887764333344 4477888887776643 223344444555554 56776644 221111 1344 2344
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEe--c-----------cCCcCccc----cHHHH
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYR--Y-----------WNPEKRAV----DFTGM 146 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~--~-----------~~~~~~~~----d~~~~ 146 (218)
. |++|...++.+...+.....|+..+|+|......+...+. ....+. + +..+..+. +++.+
T Consensus 110 s-Gsea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l 187 (425)
T PRK08088 110 T-GSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTG-KVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASI 187 (425)
T ss_pred C-cHHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhC-CCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHH
Confidence 4 4566555555443333445677779999887765555544 221100 0 00000011 14556
Q ss_pred HHHHhcC---CCCcEEEEcccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 147 YEDLVNA---PDNSVIILHACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 147 ~~~l~~~---~~~~~iil~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
++.+.+. ..-..+++-+..+||+.. +|.++|++|++++|.| ++|.++.+.
T Consensus 188 ~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~D--ev~~g~g~~ 248 (425)
T PRK08088 188 ERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIAD--EVQTGAGRT 248 (425)
T ss_pred HHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe--ccccCCCcC
Confidence 6666421 122345555667776443 7999999999999999 999987443
No 249
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=98.36 E-value=1.5e-05 Score=70.03 Aligned_cols=156 Identities=15% Similarity=0.077 Sum_probs=110.0
Q ss_pred EeCCCCCccCchHHHHHHHHHhhcC----CCCccCcC--CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHH
Q psy6266 17 YRTEECKPWVLPVVRQAEKELAADD----SLNHEYLP--VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGAL 90 (218)
Q Consensus 17 ~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~~Y~~--~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al 90 (218)
|-|..-..++.+.|.+++.....+. ...|.|.- ..-+++-|+++++.+.. ++++| +-|.|++++.
T Consensus 4 YlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga-------~~~eI--iFTSG~TEsn 74 (386)
T COG1104 4 YLDNAATTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGA-------DPEEI--IFTSGATESN 74 (386)
T ss_pred cccccccCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCC-------CCCeE--EEecCCcHHH
Confidence 4455556678899999988766541 11122211 12267788888887743 34554 5999999999
Q ss_pred HHHHHH--HHHhc--CCCeEEecCCCchhHHHHHHHh---CCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcc
Q psy6266 91 RVGAEF--LHRIL--NYTTFYYSKPTWENHRLVFLNA---GFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHA 163 (218)
Q Consensus 91 ~~~~~~--l~~l~--~gd~V~i~~P~y~~y~~~~~~~---g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~ 163 (218)
.++... ...-+ .|..++++.-=.+.-...++.. |+ ++.++|.. ....+|.+.++++|+ +++.++-+.
T Consensus 75 NlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~-~Vtyl~V~--~~G~v~~e~L~~al~---~~T~LVSim 148 (386)
T COG1104 75 NLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGF-EVTYLPVD--SNGLVDLEQLEEALR---PDTILVSIM 148 (386)
T ss_pred HHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCC-eEEEeCCC--CCCeEcHHHHHHhcC---CCceEEEEE
Confidence 887774 21111 4788988877777666655555 88 88888763 245669999999996 456666666
Q ss_pred cCCCCcHH-----HHHHHhhcCeEEEeeC
Q psy6266 164 CAHNPTAQ-----QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 164 ~p~NPTG~-----~l~~l~~~~~i~ii~D 187 (218)
.-||=||. +|.++|+++++++..|
T Consensus 149 ~aNnE~G~IQpI~ei~~i~k~~~i~fHvD 177 (386)
T COG1104 149 HANNETGTIQPIAEIGEICKERGILFHVD 177 (386)
T ss_pred ecccCeeecccHHHHHHHHHHcCCeEEEe
Confidence 78999998 7999999999999999
No 250
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=98.33 E-value=4.9e-06 Score=73.78 Aligned_cols=122 Identities=16% Similarity=0.205 Sum_probs=86.1
Q ss_pred ccCcCCCCc---HHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHH
Q psy6266 45 HEYLPVLGL---ESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFL 121 (218)
Q Consensus 45 ~~Y~~~~G~---~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~ 121 (218)
..|+-. |. ..|.+++++...+ +. ++.++.|+.|+..++.++ +.+||.|++++..|+.-...++
T Consensus 47 ~~Y~R~-gnPt~~~le~~la~Le~g---------~~--a~~~~SGmaAi~~~l~~l--l~~Gd~iv~~~~~Y~~t~~~~~ 112 (386)
T PF01053_consen 47 YIYSRY-GNPTVRALEQRLAALEGG---------ED--ALLFSSGMAAISAALLAL--LKPGDHIVASDDLYGGTYRLLE 112 (386)
T ss_dssp CSBTTT-C-HHHHHHHHHHHHHHT----------SE--EEEESSHHHHHHHHHHHH--S-TTBEEEEESSSSHHHHHHHH
T ss_pred cceecc-ccccHHHHHHHHHHhhcc---------cc--eeeccchHHHHHHHHHhh--cccCCceEecCCccCcchhhhh
Confidence 445543 44 4566666665533 22 468899999998888776 6799999999999998776665
Q ss_pred H----hCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCe-EEEeeCCcee
Q psy6266 122 N----AGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHH-VYLLRSGRIN 191 (218)
Q Consensus 122 ~----~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~-i~ii~D~r~~ 191 (218)
. .|. ++..+ +. .|.+.++++++ +++.+++.-+|.||+.. .++++|++++ +.++.| -.
T Consensus 113 ~~l~~~gv-~v~~~---d~----~d~~~l~~~l~---~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~~~vVD--nT 179 (386)
T PF01053_consen 113 ELLPRFGV-EVTFV---DP----TDLEALEAALR---PNTKLVFLESPSNPTLEVPDLEAIAKLAKEHGDILVVVD--NT 179 (386)
T ss_dssp HCHHHTTS-EEEEE---ST----TSHHHHHHHHC---TTEEEEEEESSBTTTTB---HHHHHHHHHHTTT-EEEEE--CT
T ss_pred hhhcccCc-EEEEe---Cc----hhHHHHHhhcc---ccceEEEEEcCCCcccccccHHHHHHHHHHhCCceEEee--cc
Confidence 3 355 44444 22 37888988886 35666666799999986 7899999998 999999 55
Q ss_pred ec
Q psy6266 192 MC 193 (218)
Q Consensus 192 y~ 193 (218)
+.
T Consensus 180 ~a 181 (386)
T PF01053_consen 180 FA 181 (386)
T ss_dssp TT
T ss_pred cc
Confidence 54
No 251
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=98.33 E-value=1.2e-05 Score=71.58 Aligned_cols=174 Identities=13% Similarity=0.081 Sum_probs=96.3
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.-.+.-| ...|.|.+|..+.++. ..+ +....+.+. ...+++++.. .. ..+++ +.+
T Consensus 37 ~dG~~~iD~~~~~~~~~lG--h~~p~v~~a~~~~~~~--~~~-~~~~~~~~~-~~~l~~~l~~-~~----~~~~~--~~~ 103 (403)
T PRK05093 37 QQGKEYIDFAGGIAVTALG--HCHPALVKALKEQGEK--LWH-ISNVFTNEP-ALRLAKKLID-AT----FAERV--FFA 103 (403)
T ss_pred CCCCEEEEcCcCHHhccCC--CCCHHHHHHHHHHHHh--cCc-ccCccCCHH-HHHHHHHHHh-hC----CCCEE--EEe
Confidence 4578888987663223456 3677888887766543 111 222222233 2344555533 21 11343 477
Q ss_pred ccChhHHHHHHHHHHHhc-----C-CCeEEecCCCchhHH-HHHHHhCCCcceeEe-cc--CCcCc---cccHHHHHHHH
Q psy6266 84 LSGTGALRVGAEFLHRIL-----N-YTTFYYSKPTWENHR-LVFLNAGFTEAREYR-YW--NPEKR---AVDFTGMYEDL 150 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~-----~-gd~V~i~~P~y~~y~-~~~~~~g~~~~~~~~-~~--~~~~~---~~d~~~~~~~l 150 (218)
.+|++|...++.+..... + -+.|+..+-+|-... ..+... . .+...+ +. ..... -.|++.+++.+
T Consensus 104 ~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l 181 (403)
T PRK05093 104 NSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVG-G-QPKYSDGFGPKPADITHVPFNDLAAVKAVI 181 (403)
T ss_pred CchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhc-C-ChhhhhcCCCCCCCcEEeCCCCHHHHHHHh
Confidence 788888887777543321 2 346777777665533 222221 1 111000 00 00000 11677787777
Q ss_pred hcCCCCcEEEEcccCCCCcHH----------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 151 VNAPDNSVIILHACAHNPTAQ----------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 151 ~~~~~~~~iil~~~p~NPTG~----------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
. ++..+++. .|.||+|. +|.++|++|++++|.| |+|.++.+.
T Consensus 182 ~---~~~aaiii-ep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~D--Ev~~g~g~~ 233 (403)
T PRK05093 182 D---DHTCAVVV-EPIQGEGGVIPATPEFLQGLRELCDQHNALLIFD--EVQTGMGRT 233 (403)
T ss_pred c---CCeEEEEE-ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe--chhhCCCCC
Confidence 4 33444444 38888864 7899999999999999 999998554
No 252
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=98.31 E-value=1.9e-05 Score=69.47 Aligned_cols=170 Identities=14% Similarity=0.130 Sum_probs=105.1
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| . .|.|++|..+.++. .. .| +..-..++++++++++.+ . ++.+ ++.+
T Consensus 26 ~dg~~~lD~~s~~~~~~lG--~-~p~v~~a~~~~~~~--~~-~~-~~~~~~~~~~~la~~l~~-~------~~~~-~~~~ 90 (375)
T PRK04260 26 TDGKKYLDFSSGIGVTNLG--F-HPQVQQALQKQAGL--IW-HS-PNLYLNSLQEEVAQKLIG-D------KDYL-AFFC 90 (375)
T ss_pred CCCCEEEECCCCcccccCC--C-CHHHHHHHHHHHHh--cC-cc-cCccCCHHHHHHHHHHhc-C------cCCE-EEEc
Confidence 4577788886653222334 2 45688887776643 11 12 223456788889987744 2 1222 3578
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHH-HHHHHhCCCcce---------eEeccCCcCccccHHHHHHHHhcC
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHR-LVFLNAGFTEAR---------EYRYWNPEKRAVDFTGMYEDLVNA 153 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~-~~~~~~g~~~~~---------~~~~~~~~~~~~d~~~~~~~l~~~ 153 (218)
.++++|...++++.....++++|++.+++|.... ......|. +.. .++.. .-.|++.+++.+.
T Consensus 91 ~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~dl~~l~~~l~-- 163 (375)
T PRK04260 91 NSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQ-DKIKDGFGDGVPHFSYA----IFNDLNSVKALVN-- 163 (375)
T ss_pred CccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCC-cccCCCCCCCCCCeEEe----CCCCHHHHHHhcC--
Confidence 8999999988886644445788999999887533 22222222 111 11110 0126777777663
Q ss_pred CCCcEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 154 PDNSVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 154 ~~~~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
++..+++.-.++|++|. ++.++|+++++++|.| ++|.++...
T Consensus 164 -~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~D--e~~~g~g~~ 214 (375)
T PRK04260 164 -KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVD--EVQTGMGRT 214 (375)
T ss_pred -CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEe--chhhCCCcc
Confidence 23344555567888876 7889999999999999 999887443
No 253
>PRK06434 cystathionine gamma-lyase; Validated
Probab=98.27 E-value=5.2e-06 Score=73.61 Aligned_cols=108 Identities=17% Similarity=0.184 Sum_probs=73.0
Q ss_pred cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHH----HHHHHhCCCcc
Q psy6266 53 LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHR----LVFLNAGFTEA 128 (218)
Q Consensus 53 ~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~----~~~~~~g~~~~ 128 (218)
..+|-+.++++.-+ +. ++.+.+|+.|+.+++.++ +.|||+|+++.+.|++.. ..+...|+ ++
T Consensus 66 ~~~lE~~la~leg~---------~~--av~~sSG~aAi~~al~al--l~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi-~v 131 (384)
T PRK06434 66 VQAFEEKYAVLENA---------EH--ALSFSSGMGAITSAILSL--IKKGKRILSISDLYGQTFYFFNKVLKTLGI-HV 131 (384)
T ss_pred HHHHHHHHHHHhCC---------Cc--EEEeCCHHHHHHHHHHHH--hCCCCEEEEecCccchHHHHHHHHHHhcCc-EE
Confidence 45566666665432 11 358888999999988876 689999999987655544 55566788 78
Q ss_pred eeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeC
Q psy6266 129 REYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 129 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D 187 (218)
+.++....+ .++ +. ++++.+++..+|.|||+. +|.++|+++++++ |
T Consensus 132 ~fvd~~~~~--~~~-------l~--~~~tklv~~e~~snpt~~v~Di~~I~~la~~~~lvV--D 182 (384)
T PRK06434 132 DYIDTDRLN--SLD-------FD--PSNYDLIYAESITNPTLKVPDIKNVSSFCHENDVIV--D 182 (384)
T ss_pred EEECCCChh--hee-------ec--CCCeeEEEEEcCCCCCceeecHHHHHHHHHHcCeEE--E
Confidence 887552111 111 21 123455666789999987 8999999998543 8
No 254
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=98.26 E-value=1.3e-05 Score=70.40 Aligned_cols=163 Identities=10% Similarity=-0.023 Sum_probs=92.5
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhc-CC-CCc--cCcCCCC----cHHHHHHHHHHhcCCCCCCCcCCCceE
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKELAAD-DS-LNH--EYLPVLG----LESFSSAATRMLLGGDASPPLREGRAF 79 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~-~~-~~~--~Y~~~~G----~~~lr~aia~~~~~~~~~~~~~~~~v~ 79 (218)
.+|||+--.|-+-.-++++.+.+.+|+.+...+ +. +.+ ...-..| +.++|+.+++++.. +..
T Consensus 5 ~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~---------~~~- 74 (370)
T PRK05937 5 LSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGA---------PEA- 74 (370)
T ss_pred ceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCC---------CeE-
Confidence 478998888866555555555555554443211 00 011 1111122 67888888887632 122
Q ss_pred EEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC---CCC
Q psy6266 80 GVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA---PDN 156 (218)
Q Consensus 80 ~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~---~~~ 156 (218)
.+.+.|. .+...+...+ ..+||.|++..=.+++-...++.... ..+.++ ..|++.+++.|+.. .++
T Consensus 75 l~~~sG~-~a~~~~~~~~--~~~~d~ii~d~~~H~sv~~~~~~~~~-~~~~~~-------~~d~~~l~~~l~~~~~~~~~ 143 (370)
T PRK05937 75 FIVPSGY-MANLGLCAHL--SSVTDYVLWDEQVHISVVYSLSVISG-WHQSFR-------HNDLDHLESLLESCRQRSFG 143 (370)
T ss_pred EEECChH-HHHHHHHHHh--CCCCCEEEEEhhhhHHHHHHHHHcCC-ceEEec-------CCCHHHHHHHHHhhhccCCC
Confidence 2344554 3332222222 24677666655554443344444333 233331 24778888877642 123
Q ss_pred cEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 157 SVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 157 ~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+.+++...++|+||. +|.++|++++++++.| +++.
T Consensus 144 ~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livD--ea~~ 183 (370)
T PRK05937 144 RIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVD--EAHA 183 (370)
T ss_pred cEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEE--CCcc
Confidence 455555689999997 8999999999999999 7876
No 255
>PLN02624 ornithine-delta-aminotransferase
Probab=98.23 E-value=3.1e-05 Score=70.47 Aligned_cols=178 Identities=12% Similarity=0.114 Sum_probs=99.5
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ...|.|.+|.++.++.......+.......+|.+.++++. + . +++ +.+
T Consensus 72 ~dG~~ylD~~sg~~~~~~G--h~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~-~------~--~~~--~f~ 138 (474)
T PLN02624 72 PEGKKYLDFLSAYSAVNQG--HCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF-G------Y--DMV--LPM 138 (474)
T ss_pred CCCCEEEEcccchhcccCC--CCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc-C------C--CeE--EEe
Confidence 4577777876664323344 3467788877665543111111233344455666655542 2 1 344 466
Q ss_pred ccChhHHHHHHHHHHHhc-------CCC-eEEecCCCchhHHHHHHHhCCCcce-eEecc--CCcCc---cccHHHHHHH
Q psy6266 84 LSGTGALRVGAEFLHRIL-------NYT-TFYYSKPTWENHRLVFLNAGFTEAR-EYRYW--NPEKR---AVDFTGMYED 149 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~-------~gd-~V~i~~P~y~~y~~~~~~~g~~~~~-~~~~~--~~~~~---~~d~~~~~~~ 149 (218)
.+|++|...++.+..... +++ .|+...-+|-........... ++. ..+++ .+... -.|++.+++.
T Consensus 139 ~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 217 (474)
T PLN02624 139 NTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSC-DNEATRGFGPLLPGHLKVDFGDLDALEKI 217 (474)
T ss_pred CChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCC-CccccccCCCCCCCceEeCCCCHHHHHHH
Confidence 778888888777543321 133 466666555543222222222 111 11000 00000 1167888888
Q ss_pred HhcCCCCcEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccCCC
Q psy6266 150 LVNAPDNSVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGLTT 197 (218)
Q Consensus 150 l~~~~~~~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l~~ 197 (218)
++....+..+++..+++||+|. +|.++|++|++++|.| |+|.|+..
T Consensus 218 l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~D--Ev~tG~Gr 272 (474)
T PLN02624 218 FEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIAD--EIQTGLAR 272 (474)
T ss_pred HHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe--ccccCcCc
Confidence 8643344455666789999996 7899999999999999 99998643
No 256
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=98.16 E-value=3.9e-05 Score=69.04 Aligned_cols=129 Identities=16% Similarity=0.083 Sum_probs=85.1
Q ss_pred CccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCC-CchhHHHHHHH
Q psy6266 44 NHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKP-TWENHRLVFLN 122 (218)
Q Consensus 44 ~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P-~y~~y~~~~~~ 122 (218)
.-.|..+....+|.+++++++-. + . ++-|..|+.|+.+++.+. +.|||+| +.- .|......+..
T Consensus 71 Dd~Yagd~s~~~LE~~vAe~lG~-e--------~--aV~v~sGTaAl~ll~~l~--v~pGd~V--p~n~~f~Tt~ahI~~ 135 (460)
T PRK13237 71 DEAYAGSRNFYHLEETVQEYYGF-K--------H--VVPTHQGRGAENLLSRIA--IKPGQYV--PGNMYFTTTRYHQEL 135 (460)
T ss_pred chhhcCCCcHHHHHHHHHHHHCC-C--------e--EEEeCCHHHHHHHHHHhC--CCCcCEE--CCccchHhhHHHHHh
Confidence 44699999999999999987632 1 2 357788899999865433 6789976 444 44444444677
Q ss_pred hCCCcceeEec--------cCCcCccccHHHHHHHHhcCC-CCcEEEEcccCCCCcH---------HHHHHHhhcCeEEE
Q psy6266 123 AGFTEAREYRY--------WNPEKRAVDFTGMYEDLVNAP-DNSVIILHACAHNPTA---------QQVAHMVDKHHVYL 184 (218)
Q Consensus 123 ~g~~~~~~~~~--------~~~~~~~~d~~~~~~~l~~~~-~~~~iil~~~p~NPTG---------~~l~~l~~~~~i~i 184 (218)
.|+ ..+.+.. ..+..+.+|++.+++.|++.. ++..++..-.++|..| .++.++|++|+|.+
T Consensus 136 ~Ga-~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~V 214 (460)
T PRK13237 136 NGG-IFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKV 214 (460)
T ss_pred CCc-EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEE
Confidence 887 5554421 113346789999999997532 1111111112456553 28999999999999
Q ss_pred eeCC
Q psy6266 185 LRSG 188 (218)
Q Consensus 185 i~D~ 188 (218)
+.|+
T Consensus 215 i~Da 218 (460)
T PRK13237 215 FFDA 218 (460)
T ss_pred EEEC
Confidence 9998
No 257
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=98.15 E-value=6.2e-05 Score=66.82 Aligned_cols=178 Identities=13% Similarity=0.121 Sum_probs=95.3
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|......| ...|.|.+|.++.++..........+.-..+|.+.++++. + .++ ++.+
T Consensus 34 ~~g~~~lD~~s~~~~~~~G--h~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~--------~~~--~~~~ 100 (401)
T TIGR01885 34 VEGKRYLDFLSAYSAVNQG--HCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF-G--------YDK--VLPM 100 (401)
T ss_pred CCCCEEEEcccCHhhccCC--CCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc-C--------CCE--EEEe
Confidence 4567778887663222233 3478888887766543111111111222344444444432 2 133 3578
Q ss_pred ccChhHHHHHHHHHHHh-------cCC-CeEEecCCCchhH-HHHHHHhCCCcceeEeccC---Cc---CccccHHHHHH
Q psy6266 84 LSGTGALRVGAEFLHRI-------LNY-TTFYYSKPTWENH-RLVFLNAGFTEAREYRYWN---PE---KRAVDFTGMYE 148 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l-------~~g-d~V~i~~P~y~~y-~~~~~~~g~~~~~~~~~~~---~~---~~~~d~~~~~~ 148 (218)
.+|++|...++.+.... .+| +.|+...-+|... ...+...+ .+.....+. .. -...|++.+++
T Consensus 101 ~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~le~ 178 (401)
T TIGR01885 101 NTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMST--DPDSRTNFGPYVPGFKKIPYNNLEALEE 178 (401)
T ss_pred CccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcC--CcccccccCCCCCCceEeCCCCHHHHHH
Confidence 88888888887764332 133 4555566665432 22223222 110000000 00 00126778887
Q ss_pred HHhcCCCCcEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 149 DLVNAPDNSVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 149 ~l~~~~~~~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
.+++..++..+++.-+.+|+||. +|.++|++|++++|.| |+|.++.+.
T Consensus 179 ~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~D--Ev~~g~g~~ 235 (401)
T TIGR01885 179 ALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIAD--EIQTGLGRT 235 (401)
T ss_pred HHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe--chhhCCCcc
Confidence 77643333344444567877776 7899999999999999 999887544
No 258
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=98.15 E-value=4.7e-05 Score=67.65 Aligned_cols=175 Identities=11% Similarity=0.044 Sum_probs=95.9
Q ss_pred CCCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 2 YMSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 2 ~~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
|...|...||+.-|...+.-|. ..|.|.+|.++.++. ..+ ...... .+....+++++.. .. ..+++ .
T Consensus 30 ~d~dG~~ylD~~~g~~~~~lGh--~~p~v~~a~~~~~~~--~~~-~~~~~~-~~~~~~la~~L~~-~~----~~~~~--~ 96 (397)
T TIGR03246 30 WDQQGKEYIDFAGGIAVNALGH--AHPELVKALIEQADK--LWH-IGNGYT-NEPVLRLAKKLVD-AT----FADKV--F 96 (397)
T ss_pred EeCCCCEEEECCcCHhhccCCC--CCHHHHHHHHHHHHh--ccc-ccCccC-CHHHHHHHHHHHh-hC----CCCEE--E
Confidence 3457888899977643345663 478888887766542 111 111111 2233344444433 11 11343 5
Q ss_pred EeccChhHHHHHHHHHHHhc-----CC-CeEEecCCCchhHH-HHHHHhCCCcceeEec--cCCcC---ccccHHHHHHH
Q psy6266 82 QTLSGTGALRVGAEFLHRIL-----NY-TTFYYSKPTWENHR-LVFLNAGFTEAREYRY--WNPEK---RAVDFTGMYED 149 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~-----~g-d~V~i~~P~y~~y~-~~~~~~g~~~~~~~~~--~~~~~---~~~d~~~~~~~ 149 (218)
.+.+|++|...++.+.+... +| +.|+..+=+|-... ..+...+. ....-++ ..... ...|++.+++.
T Consensus 97 f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 175 (397)
T TIGR03246 97 FCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQ-PKYSQGFAPLPGGIKHAPYNDLAAAKAL 175 (397)
T ss_pred EeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCC-cccccCCCCCCCceEEeCCCCHHHHHHH
Confidence 78888998888887654331 23 45777776665543 23333332 1110000 00000 01277888877
Q ss_pred HhcCCCCcEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 150 LVNAPDNSVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 150 l~~~~~~~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
+. ++..+++....+++.|. +|.++|++|++++|.| |+|.|+
T Consensus 176 l~---~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~D--Ev~tG~ 225 (397)
T TIGR03246 176 IS---DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFD--EVQTGV 225 (397)
T ss_pred hc---cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe--chhhcC
Confidence 74 23444444434444442 7999999999999999 999887
No 259
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=98.12 E-value=7.2e-06 Score=70.02 Aligned_cols=147 Identities=9% Similarity=0.035 Sum_probs=101.2
Q ss_pred CchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCe
Q psy6266 26 VLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTT 105 (218)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~ 105 (218)
+-+.+.+|+.++... ...|....-..+|.+.+++++-. +.. +-+++|+.|-.++++++ +.|++.
T Consensus 7 ~~~~m~~a~~~a~~g---d~~Yg~D~~~~~l~~~i~~l~g~---------e~a--~f~~sGT~An~~al~~~--~~~~~~ 70 (290)
T PF01212_consen 7 PTPAMLEAMAAANVG---DDAYGEDPTTARLEERIAELFGK---------EAA--LFVPSGTMANQLALRAH--LRPGES 70 (290)
T ss_dssp S-HHEEHHHHHTTSB----CCTTSSHHHHHHHHHHHHHHTS---------SEE--EEESSHHHHHHHHHHHH--HHTTEE
T ss_pred CCHHHHHHHHccccC---CcccCCChhHHHHHHHHHHHcCC---------CEE--EEeCCCChHHHHHHHHH--HhcCCc
Confidence 456677776444422 23699888889999998876632 222 36678899998888877 469999
Q ss_pred EEecCCCchh---HHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC---CCCcEEEEcccCCCCcHH--------
Q psy6266 106 FYYSKPTWEN---HRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA---PDNSVIILHACAHNPTAQ-------- 171 (218)
Q Consensus 106 V~i~~P~y~~---y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~---~~~~~iil~~~p~NPTG~-------- 171 (218)
|+..++++.. ....-...|+ +++.++.. +...++++.+++.+... .+...++...+++|-.|-
T Consensus 71 vi~~~~aHi~~~E~ga~~~~~G~-~~~~l~~~--~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el 147 (290)
T PF01212_consen 71 VICADTAHIHFDETGAIEELSGA-KLIPLPSD--DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEEL 147 (290)
T ss_dssp EEEETTEHHHHSSTTHHHHHTTC-EEEEEBEC--TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHH
T ss_pred eeccccceeeeeccchhhHhcCc-EEEECCCc--ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHH
Confidence 9999997553 2233366788 88888653 22578999999988762 133445555678887543
Q ss_pred -HHHHHhhcCeEEEeeCC-cee
Q psy6266 172 -QVAHMVDKHHVYLLRSG-RIN 191 (218)
Q Consensus 172 -~l~~l~~~~~i~ii~D~-r~~ 191 (218)
+|.++|++|++.+.-|| |..
T Consensus 148 ~ai~~~a~~~gl~lhmDGARl~ 169 (290)
T PF01212_consen 148 RAISELAREHGLPLHMDGARLA 169 (290)
T ss_dssp HHHHHHHHHHT-EEEEEETTHH
T ss_pred HHHHHHHHhCceEEEEehhhHH
Confidence 78999999999999998 544
No 260
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.11 E-value=3.3e-05 Score=75.55 Aligned_cols=103 Identities=7% Similarity=-0.026 Sum_probs=80.5
Q ss_pred EEeccCh----hHHHHHHHHHHHhcC-CC----eEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHh
Q psy6266 81 VQTLSGT----GALRVGAEFLHRILN-YT----TFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLV 151 (218)
Q Consensus 81 ~~t~G~~----~al~~~~~~l~~l~~-gd----~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~ 151 (218)
..+++++ .++.+++..+ +.+ || +|++|....++....+.+.|+ +++.+++. +...+|++.+++.+.
T Consensus 587 ~f~pnaga~ge~a~~~vi~~~--~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~-~vv~v~~d--~~G~vDle~L~~~i~ 661 (993)
T PLN02414 587 SLQPNAGAAGEYAGLMVIRAY--HLSRGDHHRNVCIIPVSAHGTNPASAAMCGM-KIVVVGTD--AKGNINIEELRKAAE 661 (993)
T ss_pred EEcCCCcHHHHHHHHHHHHHH--HhccCCCCCCEEEeCCCcCccCHHHHHHCCC-EEEEeccC--CCCCcCHHHHHHHHh
Confidence 3556555 5666666665 445 88 899999999998888888999 99999873 345789999999997
Q ss_pred cCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCC
Q psy6266 152 NAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 152 ~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~ 188 (218)
..++++.+++...|+|-+|. +|.+++++++.+++.||
T Consensus 662 ~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDg 703 (993)
T PLN02414 662 AHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDG 703 (993)
T ss_pred ccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEe
Confidence 54334556666789999887 68899999999999996
No 261
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=98.04 E-value=3.6e-05 Score=68.63 Aligned_cols=130 Identities=12% Similarity=0.026 Sum_probs=87.3
Q ss_pred CcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCC
Q psy6266 47 YLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFT 126 (218)
Q Consensus 47 Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~ 126 (218)
.....|...=-|..+...|| .+ + ..++|.|+|.++.++++++ +.|||.|+++.=+.=+-...+.+.|+
T Consensus 61 L~~p~G~I~eAe~~aA~~fG-Ad-------~-t~flvnGsT~g~~a~i~a~--~~~gd~VLv~RN~HkSv~~alil~ga- 128 (417)
T PF01276_consen 61 LHDPEGIIKEAEELAARAFG-AD-------K-TFFLVNGSTSGNQAMIMAL--CRPGDKVLVDRNCHKSVYNALILSGA- 128 (417)
T ss_dssp TTTTBTHHHHHHHHHHHHHT-ES-------E-EEEESSHHHHHHHHHHHHH--TTTTCEEEEETT--HHHHHHHHHHTE-
T ss_pred ccCCccHHHHHHHHHHHhcC-CC-------e-EEEEecCchHHHHHHHHHh--cCCCCEEEEcCCcHHHHHHHHHHcCC-
Confidence 33456665555555666666 22 2 2469999999999998877 78999999999998887778889999
Q ss_pred cceeEeccCCcCc----cccH-----HHHHHHHhcCCCCcE---EEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCc
Q psy6266 127 EAREYRYWNPEKR----AVDF-----TGMYEDLVNAPDNSV---IILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGR 189 (218)
Q Consensus 127 ~~~~~~~~~~~~~----~~d~-----~~~~~~l~~~~~~~~---iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r 189 (218)
+|++++.. .+.. .++. +.++++|++.+.... +++. +| +--|. +|+++|.++++.|+.|
T Consensus 129 ~Pvyi~p~-~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt-~P-TY~Gv~~di~~I~~~~h~~~~~llvD-- 203 (417)
T PF01276_consen 129 IPVYIPPE-DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLT-SP-TYYGVCYDIKEIAEICHKHGIPLLVD-- 203 (417)
T ss_dssp EEEEEEEE-E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEE-SS--TTSEEE-HHHHHHHHCCTECEEEEE--
T ss_pred eEEEecCC-ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEe-CC-CCCeEEECHHHHHHHhcccCCEEEEE--
Confidence 89887653 2222 2255 889999987643322 3332 22 22243 8999999999999999
Q ss_pred eeec
Q psy6266 190 INMC 193 (218)
Q Consensus 190 ~~y~ 193 (218)
|+..
T Consensus 204 EAhG 207 (417)
T PF01276_consen 204 EAHG 207 (417)
T ss_dssp -TT-
T ss_pred cccc
Confidence 5543
No 262
>PLN00144 acetylornithine transaminase
Probab=98.03 E-value=8.3e-05 Score=65.82 Aligned_cols=180 Identities=15% Similarity=0.076 Sum_probs=99.2
Q ss_pred CCCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 2 YMSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 2 ~~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
|-..|...||+.-|.....-| ...|.|.+|.++.++. ..+ +... ..-+-...+++++.. .. ..++| .
T Consensus 10 ~D~dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~q~~~--~~~-~~~~-~~~~~~~~la~~l~~-~~----~~~~v--~ 76 (382)
T PLN00144 10 YDVEGKEYLDMAAGIAVNALG--HGDPDWVKAVAEQAGT--LAH-VSNV-YHTIPQVELAKRLVA-SS----FADRV--F 76 (382)
T ss_pred EeCCCCEEEECCcCHHhccCC--CCCHHHHHHHHHHHHh--cCC-cccc-ccCHHHHHHHHHHHh-cC----CCCeE--E
Confidence 346788888987664333445 4467788776665543 111 1111 112233445555543 21 12444 4
Q ss_pred EeccChhHHHHHHHHHHHhcC-------------CCeEEecCCCchhHHHHHHHhCCCcceeEecc--CCcCc---cccH
Q psy6266 82 QTLSGTGALRVGAEFLHRILN-------------YTTFYYSKPTWENHRLVFLNAGFTEAREYRYW--NPEKR---AVDF 143 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~-------------gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~--~~~~~---~~d~ 143 (218)
-+.+|++|...++.+.+.... ..+|+...-+|-................-++. ..+.. -.|+
T Consensus 77 f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~ 156 (382)
T PLN00144 77 FCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNL 156 (382)
T ss_pred EeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCH
Confidence 778888888877775433210 14688888887765433333222011111110 00000 1167
Q ss_pred HHHHHHHhcCCCCcEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 144 TGMYEDLVNAPDNSVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 144 ~~~~~~l~~~~~~~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
+.+++.+.. .+...+++-+. +||.|. +|.++|++|++++|.| |+|.++-..
T Consensus 157 ~~l~~~~~~-~~~aavi~eP~-q~~gg~~~~~~~~~~~l~~l~~~~g~llI~D--Ev~tg~gr~ 216 (382)
T PLN00144 157 EAARKLIQK-GKTAAVFVEPV-QGEGGIYPATKEFLQGLRALCDEAGALLVFD--EVQCGLGRT 216 (382)
T ss_pred HHHHHhcCC-CCeEEEEEccc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEe--chhhCCCcc
Confidence 777776642 12234555555 888554 7999999999999999 999987443
No 263
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=97.99 E-value=0.00013 Score=64.74 Aligned_cols=119 Identities=13% Similarity=0.143 Sum_probs=82.6
Q ss_pred CCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHH----HhCCC
Q psy6266 51 LGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFL----NAGFT 126 (218)
Q Consensus 51 ~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~----~~g~~ 126 (218)
.-...|-++++++--+ +. ++.+++|+.|+..++.++ +.+||.|++++..|+.-...+. ..|.
T Consensus 63 PT~~~lE~~~a~LEg~---------~~--~~afsSGmaAI~~~~l~l--l~~GD~vl~~~~~YG~t~~~~~~~l~~~gi- 128 (396)
T COG0626 63 PTRDALEEALAELEGG---------ED--AFAFSSGMAAISTALLAL--LKAGDHVLLPDDLYGGTYRLFEKILQKFGV- 128 (396)
T ss_pred ccHHHHHHHHHHhhCC---------Cc--EEEecCcHHHHHHHHHHh--cCCCCEEEecCCccchHHHHHHHHHHhcCe-
Confidence 3345666666665433 11 468899999999977666 6789999999999988665543 3444
Q ss_pred cceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeecc
Q psy6266 127 EAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCG 194 (218)
Q Consensus 127 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~ 194 (218)
++..+ +. .+.+...+++.+ +++.+++.=+|.|||-. .|+++|+++++.++.| ..+..
T Consensus 129 ~~~~~---d~----~~~~~~~~~~~~--~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVD--NTfat 190 (396)
T COG0626 129 EVTFV---DP----GDDEALEAAIKE--PNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVD--NTFAT 190 (396)
T ss_pred EEEEE---CC----CChHHHHHHhcc--cCceEEEEeCCCCcccccccHHHHHHHHHhcCCEEEEE--CCccc
Confidence 44444 22 134455555542 35666666799999997 7999999999999999 66554
No 264
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=97.91 E-value=0.00029 Score=63.86 Aligned_cols=163 Identities=14% Similarity=0.110 Sum_probs=108.8
Q ss_pred ccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHH-hcC
Q psy6266 24 PWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHR-ILN 102 (218)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~-l~~ 102 (218)
+++++...++.......--......| +..++=+.+.+++.. --+ .. +......|.|||+|..+++.+.+. +.+
T Consensus 72 ~~~~~~a~~~~~~~~~~nl~d~~~~p--~a~~~E~~~v~~l~~-l~~--~~-~~~~G~~t~GgTean~lal~aar~~~~~ 145 (460)
T COG0076 72 TRVPPVAAELLVSALNKNLGDPDESP--AAAELEERVVNMLSD-LLG--AP-EEASGTFTSGGTEANLLALLAARERWRK 145 (460)
T ss_pred CCCHHHHHHHHHHHHhhcCCCcccCh--hHHHHHHHHHHHHHH-HhC--CC-CCCceEEEcChHHHHHHHHHHHHHHHHH
Confidence 45566666666555533011222333 555665656555522 111 22 333457999999998877765433 211
Q ss_pred --C---C------eEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH
Q psy6266 103 --Y---T------TFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ 171 (218)
Q Consensus 103 --g---d------~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~ 171 (218)
+ . +|++|.-...+.....+..|+ ....++.- +....+|.+.+++.+.+.+..-. ++-.-+.-|||.
T Consensus 146 ~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~-~~~~v~~~-~~~~~id~~~l~~~i~~~t~~g~-vV~~aGtT~~G~ 222 (460)
T COG0076 146 RALAESGKPGGKPNIVCSETAHFSFEKAARYLGL-GLRRVPTV-PTDYRIDVDALEEAIDENTIGGV-VVGTAGTTDTGS 222 (460)
T ss_pred HhhhcccccCCCCeEEecCcchhHHHHHHHHhCC-CceeEEec-cCccccCHHHHHHHHHhhccCce-EEEEecCCCCCc
Confidence 1 1 689999898888899999999 99999884 32567899999999976532222 333456779998
Q ss_pred -----HHHHHhhcCeEEEeeCCceeeccCCC
Q psy6266 172 -----QVAHMVDKHHVYLLRSGRINMCGLTT 197 (218)
Q Consensus 172 -----~l~~l~~~~~i~ii~D~r~~y~~l~~ 197 (218)
+|+++|++++||+..| -+|.|+..
T Consensus 223 iDdi~~ia~ia~~~~i~lHVD--AA~GG~~~ 251 (460)
T COG0076 223 IDDIEELADIAEEYGIWLHVD--AAFGGFLL 251 (460)
T ss_pred cCCHHHHHHHHHHcCCcEEEE--ccccceee
Confidence 8999999999999999 88887654
No 265
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=97.88 E-value=7.8e-05 Score=65.25 Aligned_cols=148 Identities=9% Similarity=-0.106 Sum_probs=85.9
Q ss_pred CccCchHHHHHHHHHhhcCCCCc--cCcCC-------CCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEecc-ChhHHHH
Q psy6266 23 KPWVLPVVRQAEKELAADDSLNH--EYLPV-------LGLESFSSAATRMLLGGDASPPLREGRAFGVQTLS-GTGALRV 92 (218)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~~~~~--~Y~~~-------~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G-~~~al~~ 92 (218)
....|+.|++|+.+...+.+..+ .|..+ .=+.+.|+.+++++.. -.+++| +.|.| +|+++..
T Consensus 7 p~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~------~~~~~v--vf~~gs~T~a~~~ 78 (355)
T cd00611 7 PAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNI------PDNYKV--LFLQGGATGQFAA 78 (355)
T ss_pred CCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCC------CCCceE--EEEcCCchHHHHH
Confidence 35789999999877552211111 12222 1145667777765532 123444 57777 9999999
Q ss_pred HHHHHHHhc---CCCeEEecCCCchhHH-HHHHHhCCCcceeEeccCCcCccc-c-HHHHHHHHhcCCCCcEEEEcccCC
Q psy6266 93 GAEFLHRIL---NYTTFYYSKPTWENHR-LVFLNAGFTEAREYRYWNPEKRAV-D-FTGMYEDLVNAPDNSVIILHACAH 166 (218)
Q Consensus 93 ~~~~l~~l~---~gd~V~i~~P~y~~y~-~~~~~~g~~~~~~~~~~~~~~~~~-d-~~~~~~~l~~~~~~~~iil~~~p~ 166 (218)
++..+ +. +||+|++ -.|.... .+.+..|+ +++.++.. . ...+ + .+.....+ .+++.++......
T Consensus 79 ~~~~l--~~~~~~~~~i~~--g~~~~~~~~~a~~~g~-~~~~~~~~-~-~g~~~~~~~~~~~~~---~~~~~lV~~~h~~ 148 (355)
T cd00611 79 VPLNL--LGDKGTADYVVT--GAWSAKAAKEAKRYGG-VVVIVAAK-E-EGKYTKIPDVETWDL---APDAAYVHYCSNE 148 (355)
T ss_pred HHHhc--CCCCCeEEEEEC--CHHHHHHHHHHHhcCC-CcEEEecc-c-ccCCCCCCCHhhcCC---CCCCCEEEEeCCc
Confidence 98876 44 5666544 2333322 25577788 78877652 1 1112 2 12222222 2344445556678
Q ss_pred CCcHHHHHHHhhcCeEEEeeCC
Q psy6266 167 NPTAQQVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 167 NPTG~~l~~l~~~~~i~ii~D~ 188 (218)
|.||..+.++++.++++++.|+
T Consensus 149 t~tG~~~~~i~~~~g~~~~VDa 170 (355)
T cd00611 149 TIHGVEFDEVPDTGGVPLVADM 170 (355)
T ss_pred ccccEEcceecccCCCeEEEEc
Confidence 8999877778888999999995
No 266
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=97.86 E-value=0.00049 Score=62.18 Aligned_cols=183 Identities=15% Similarity=0.112 Sum_probs=96.2
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ...|.|.+|.++.+.. ..+ +.......+.+..+++.+.. .-. ...+++ .-+
T Consensus 38 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~Ai~~ql~~--~~~-~~~~~~~~~~~~~la~~L~~-~~p--~~~~~v--~f~ 107 (443)
T PRK08360 38 IEGNEYIDFLSDAAVQNVG--HNNPRVVKAIKEQTDK--LIH-YTPIYGFPVEPLLLAEKLIE-IAP--GDNPKV--SFG 107 (443)
T ss_pred CCCCEEEEccccHhhcccC--CCCHHHHHHHHHHHHh--ccC-ccccccCcHHHHHHHHHHHH-hCC--CCCCEE--EEc
Confidence 5677888887764334455 4577788887665543 121 21111222333444555433 110 111344 578
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHH-HHHHHhCCC-----------cceeEeccCCcC--cc--------c
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHR-LVFLNAGFT-----------EAREYRYWNPEK--RA--------V 141 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~-~~~~~~g~~-----------~~~~~~~~~~~~--~~--------~ 141 (218)
.+|++|...++++-+....-..|+...-+|-... ......|.. .+..+|+-.... +. .
T Consensus 108 ~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (443)
T PRK08360 108 LSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKME 187 (443)
T ss_pred CCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHH
Confidence 8899999988886543322345555555554432 222222210 122222211000 00 1
Q ss_pred cHHHHHHHHhcC--CCCcEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 142 DFTGMYEDLVNA--PDNSVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 142 d~~~~~~~l~~~--~~~~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
+++.+++.+++. ..+...++...-+||||. ++.++|++|++++|.| |+|.++.+.
T Consensus 188 ~~~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D--Ev~~g~gr~ 253 (443)
T PRK08360 188 CVEYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVD--EVQSGLGRT 253 (443)
T ss_pred HHHHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe--ccccCCCcC
Confidence 234455555431 122333443345699986 7899999999999999 999987543
No 267
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=97.85 E-value=0.00055 Score=60.95 Aligned_cols=173 Identities=11% Similarity=0.002 Sum_probs=98.8
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
...|...||+.-|...+.-| ...|.|.+|.++.++. ..+.+. ....++...+++++.. .. ..+++ +.
T Consensus 32 d~dG~~~lD~~sg~~~~~lG--h~~p~v~~a~~~q~~~--~~~~~~--~~~~~~~~~la~~l~~-~~----~~~~v--~f 98 (395)
T PRK03715 32 DHNGKRYLDFIQGWAVNCLG--HCNPGMVEALAAQAEK--LINPSP--AFYNEPMAKLAGLLTQ-HS----CFDKV--FF 98 (395)
T ss_pred ECCCCEEEECCcChhhccCC--CCCHHHHHHHHHHHHh--cccccc--cccCHHHHHHHHHHhh-cc----CCCEE--EE
Confidence 45688888988764444455 3357788776665532 222221 1234566777887754 21 12444 58
Q ss_pred eccChhHHHHHHHHHHHh----cCC-CeEEecCCCchhHHH-HHHHhCCCcceeEeccC-CcCc----cccHHHHHHHHh
Q psy6266 83 TLSGTGALRVGAEFLHRI----LNY-TTFYYSKPTWENHRL-VFLNAGFTEAREYRYWN-PEKR----AVDFTGMYEDLV 151 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l----~~g-d~V~i~~P~y~~y~~-~~~~~g~~~~~~~~~~~-~~~~----~~d~~~~~~~l~ 151 (218)
+.+|++|...++.+.... .+| +.|+..+.+|..... .+...|. ......++. .... -.|++.+++.+.
T Consensus 99 ~~SGseA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~-~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 177 (395)
T PRK03715 99 ANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGK-PGWDTIFAPQVPGFPKAELNDIASVEKLIT 177 (395)
T ss_pred eCCcHHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCC-cccccCCCCCCCCceeeCCchHHHHHHHcC
Confidence 899999988888766432 123 578888888876543 2222222 111111100 0001 136677777664
Q ss_pred cCCCCcEEEEcccCCCCc--------HH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 152 NAPDNSVIILHACAHNPT--------AQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 152 ~~~~~~~iil~~~p~NPT--------G~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
+ +..+++.- |-+.. +. ++.++|++|++++|.| |++.|+
T Consensus 178 ~---~~aavi~E-pv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~D--Ev~tG~ 225 (395)
T PRK03715 178 D---KTVAVMLE-PVQGEGGVIPATREFMQQLRALTKQHGLLLIVD--EVQTGC 225 (395)
T ss_pred C---CceEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEe--ccccCC
Confidence 2 23333332 33322 22 7899999999999999 999985
No 268
>PLN02271 serine hydroxymethyltransferase
Probab=97.81 E-value=0.00027 Score=65.04 Aligned_cols=124 Identities=17% Similarity=0.110 Sum_probs=81.1
Q ss_pred cHHHHHHHHHHhcCCCCCCCcCCCc--eEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHH---------H
Q psy6266 53 LESFSSAATRMLLGGDASPPLREGR--AFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVF---------L 121 (218)
Q Consensus 53 ~~~lr~aia~~~~~~~~~~~~~~~~--v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~---------~ 121 (218)
++.|...-+..+|+ -. ..+ +. ++-.+|+.|...++.++ +.|||+|+..+..++.|.... .
T Consensus 195 iE~la~era~~lF~-~~-----~~~~gaN-VQp~SGs~AN~aV~~AL--l~PGD~IL~ldl~~GGHlshg~~~~~g~~vs 265 (586)
T PLN02271 195 IERLCCERALAAFG-LD-----SEKWGVN-VQPYSCTSANFAVYTGL--LLPGDRIMGLDSPSGGHMSHGYYTPGGKKVS 265 (586)
T ss_pred HHHHHHHHHHHHhC-Cc-----ccccccc-eeeccHHHHHHHHHHHh--cCCCCEEEEecCCCCCchhcccccccccccc
Confidence 34445555666676 22 211 22 46678888888888887 789999999999999887532 2
Q ss_pred HhCCCcceeEecc-CCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH---HHHHHhhcCeEEEeeCC
Q psy6266 122 NAGFTEAREYRYW-NPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ---QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 122 ~~g~~~~~~~~~~-~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~---~l~~l~~~~~i~ii~D~ 188 (218)
..|. ....++|. +.+...+|++.+++.... .++++++...-.||.-. .+.++|++++++++.|.
T Consensus 266 ~sG~-~~~~vpY~~d~~~g~IDyd~lek~a~~--~rPKLII~g~Saypr~~D~~~i~eIAdevGA~LmvD~ 333 (586)
T PLN02271 266 GASI-FFESLPYKVNPQTGYIDYDKLEEKALD--FRPKILICGGSSYPREWDYARFRQIADKCGAVLMCDM 333 (586)
T ss_pred cccc-eEEEEEcccccccCccCHHHHHHHhhh--cCCeEEEECchhccCcCCHHHHHHHHHHcCCEEEEEC
Confidence 2233 23333432 234567899999885443 44555655444666433 78899999999999994
No 269
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=97.80 E-value=0.00057 Score=61.13 Aligned_cols=178 Identities=13% Similarity=0.054 Sum_probs=98.3
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
-..|...||+.-|.....-| ...|.|.+|.++.++. ..+ +.+.... +....+++++.. .. + . .+++ .-
T Consensus 36 D~dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~q~~~--~~~-~~~~~~~-~~~~~la~~L~~-~~-~-~-~~~v--~f 103 (408)
T PRK04612 36 DDQGREYLDLAAGIAVCGLG--HNDPDLVAALTEQAGK--LWH-TSNVFYS-APPLKLAEELVT-AS-R-F-AEKV--FL 103 (408)
T ss_pred ECCCCEEEEcCccHhhccCC--CCCHHHHHHHHHHHHh--ccc-cccccCC-HHHHHHHHHHHh-hC-C-C-CCEE--EE
Confidence 35688888887664333445 4577777776665533 222 2221122 223445566543 21 1 1 1444 57
Q ss_pred eccChhHHHHHHHHHHHhc--CC----C-eEEecCCCchhHHHHHHHhCCCcceeEecc---CCcC---ccccHHHHHHH
Q psy6266 83 TLSGTGALRVGAEFLHRIL--NY----T-TFYYSKPTWENHRLVFLNAGFTEAREYRYW---NPEK---RAVDFTGMYED 149 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~--~g----d-~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~---~~~~---~~~d~~~~~~~ 149 (218)
+.+|++|...++++.+... .| + +|+...-+|-........... .+....-+ .... .-.|.+.+++.
T Consensus 104 ~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~-~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 182 (408)
T PRK04612 104 CNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATA-QPKYQEGYEPLPGGFRYVDFNDVEALEAA 182 (408)
T ss_pred cCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcC-CcccccCCCCCCCCceEcCCCCHHHHHHh
Confidence 8888898888877654331 22 3 588888887765432222222 12110000 0100 01267777777
Q ss_pred HhcCCCCcEEEEcccCCCCcHH----------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 150 LVNAPDNSVIILHACAHNPTAQ----------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 150 l~~~~~~~~iil~~~p~NPTG~----------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
+.. ..+..+...|.+++|. +|.++|++|++++|.| |+|.++-..
T Consensus 183 ~~~---~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~D--Ev~tg~gr~ 236 (408)
T PRK04612 183 MAG---GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLD--EIQCGMGRT 236 (408)
T ss_pred hCC---CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe--ccccCCCcC
Confidence 742 2232333456776664 7999999999999999 999987543
No 270
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=97.79 E-value=0.00061 Score=61.54 Aligned_cols=183 Identities=12% Similarity=-0.002 Sum_probs=95.7
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
-..|...||+.-|.....-| ...|.|.+|.++.+++ .. .+....+..+.+..+++++.. .... ...+++ .-
T Consensus 52 D~dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~q~~~--~~-~~~~~~~~~~~~~~la~~l~~-~~p~-~~~~~v--~f 122 (443)
T PRK06058 52 DVDGNRLIDLGSGIAVTSVG--NSAPRVVEAVREQVAR--FT-HTCFMVTPYEGYVAVAEQLNR-LTPG-DHEKRS--AL 122 (443)
T ss_pred eCCCCEEEEcCcchhhhccC--CCCHHHHHHHHHHHHh--cc-CccccccCCHHHHHHHHHHHH-hCCC-CCCCEE--EE
Confidence 34677778887664333455 4577888887766643 22 232223334555566666643 2110 111344 35
Q ss_pred eccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHh-CC------------CcceeEeccCC--cC--cccc---
Q psy6266 83 TLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNA-GF------------TEAREYRYWNP--EK--RAVD--- 142 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~-g~------------~~~~~~~~~~~--~~--~~~d--- 142 (218)
+.+|++|...++++.+.....++|+..+++|..+....... +. ..+...|+... +. ...+
T Consensus 123 ~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (443)
T PRK06058 123 FNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEE 202 (443)
T ss_pred eCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHH
Confidence 56668988888775443434578999999998876332221 11 00111111000 00 0000
Q ss_pred -HHHHHHHHhcC--CCCcEEEEcccCCCCcHH----------HHHHHhhcCeEEEeeCCceeeccCCC
Q psy6266 143 -FTGMYEDLVNA--PDNSVIILHACAHNPTAQ----------QVAHMVDKHHVYLLRSGRINMCGLTT 197 (218)
Q Consensus 143 -~~~~~~~l~~~--~~~~~iil~~~p~NPTG~----------~l~~l~~~~~i~ii~D~r~~y~~l~~ 197 (218)
.+...+.+++. ..+...++ .-|-+.+|- +|.++|++|++.+|.| |++.|+..
T Consensus 203 ~~~~~~~~l~~~~~~~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~D--EV~tGfgR 267 (443)
T PRK06058 203 AAARAITVIEKQVGADNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIAD--EVQTGFAR 267 (443)
T ss_pred HHHHHHHHHHHhhCCCceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe--ccccCCCc
Confidence 01112222221 12222233 345544432 7999999999999999 99999743
No 271
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=97.78 E-value=0.00044 Score=61.97 Aligned_cols=97 Identities=15% Similarity=0.125 Sum_probs=63.3
Q ss_pred EeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcce---------eEeccCCcCccccHHHHHHHHhc
Q psy6266 82 QTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAR---------EYRYWNPEKRAVDFTGMYEDLVN 152 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~---------~~~~~~~~~~~~d~~~~~~~l~~ 152 (218)
.+.+|+.|+..++.++ +.|||+|++++..+.++. ..|+ ++. .+.. +.....+|++.+++.+..
T Consensus 95 ~~~SG~~A~~~~l~al--~~~GD~Vl~~~~~~~~~~----~~g~-~~~~~~~~~~~~~~~~-~~~~~~~d~~~le~~l~~ 166 (416)
T PRK13034 95 QPHSGSQANGAVYLAL--LKPGDTILGMSLSHGGHL----THGA-KVSLSGKWYNAVQYGV-DRLTGLIDYDEVEELAKE 166 (416)
T ss_pred ecCCcHHHHHHHHHHh--cCCCCEEEEcCccceeee----ecCC-cceeccceeeeEEccc-ccccCCcCHHHHHHHHhh
Confidence 4578899999888877 689999999999887631 1233 331 2221 122345788888887754
Q ss_pred CCCCcEEEEcccCCCCcHH---HHHHHhhcCeEEEeeCC
Q psy6266 153 APDNSVIILHACAHNPTAQ---QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 153 ~~~~~~iil~~~p~NPTG~---~l~~l~~~~~i~ii~D~ 188 (218)
. ++.+++...+.++.-. .|.++|++|+++++.|+
T Consensus 167 ~--~~klVi~~~~~~g~~~dl~~l~~la~~~g~~livD~ 203 (416)
T PRK13034 167 H--KPKLIIAGFSAYPRELDFARFREIADEVGALLMVDM 203 (416)
T ss_pred c--CCeEEEECCCccccccCHHHHHHHHHHcCCEEEEeC
Confidence 2 2344443333333221 78899999999999994
No 272
>PLN02590 probable tyrosine decarboxylase
Probab=97.77 E-value=0.001 Score=61.54 Aligned_cols=146 Identities=15% Similarity=0.108 Sum_probs=95.3
Q ss_pred cCcCCCCcHHHHHHHHHHhcCCCCCCCcCCC-----ceEEEEeccChhHHHHHHHHHHH--h-------cCCCeEEecCC
Q psy6266 46 EYLPVLGLESFSSAATRMLLGGDASPPLREG-----RAFGVQTLSGTGALRVGAEFLHR--I-------LNYTTFYYSKP 111 (218)
Q Consensus 46 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~-----~v~~~~t~G~~~al~~~~~~l~~--l-------~~gd~V~i~~P 111 (218)
.|..+.+.-++=+.+.+|+.+ .-+ ++++ .-..++|.|+++|...++.+-+. + .|.=.|++++-
T Consensus 161 ~~~~sPa~t~lE~~vi~wl~~-l~g--lp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~ 237 (539)
T PLN02590 161 TWLTSPAATELEIIVLDWLAK-LLQ--LPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQ 237 (539)
T ss_pred CcccCchhHHHHHHHHHHHHH-HhC--CCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCC
Confidence 344455666777777777633 211 2111 12346889999887665543221 1 01125667787
Q ss_pred CchhHHHHHHHhCCC--cceeEeccCCcCccccHHHHHHHHhcC---CCCcEEEEcccCCCCcHH-----HHHHHhhcCe
Q psy6266 112 TWENHRLVFLNAGFT--EAREYRYWNPEKRAVDFTGMYEDLVNA---PDNSVIILHACAHNPTAQ-----QVAHMVDKHH 181 (218)
Q Consensus 112 ~y~~y~~~~~~~g~~--~~~~~~~~~~~~~~~d~~~~~~~l~~~---~~~~~iil~~~p~NPTG~-----~l~~l~~~~~ 181 (218)
+..+....+..+|+- +++.+|....+.+.+|.+.++++|++. ...+++++-....=.||. +|+++|++|+
T Consensus 238 aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g 317 (539)
T PLN02590 238 THSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYG 317 (539)
T ss_pred chHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhC
Confidence 877888888888871 367777632234678999999999753 123455555566667887 8999999999
Q ss_pred EEEeeCCceeeccCC
Q psy6266 182 VYLLRSGRINMCGLT 196 (218)
Q Consensus 182 i~ii~D~r~~y~~l~ 196 (218)
+|+..| -+|.|..
T Consensus 318 ~WlHVD--aA~GG~a 330 (539)
T PLN02590 318 IWLHVD--AAYAGNA 330 (539)
T ss_pred CeEEEe--cchhhhh
Confidence 999999 8988854
No 273
>PRK15029 arginine decarboxylase; Provisional
Probab=97.75 E-value=0.00043 Score=66.15 Aligned_cols=126 Identities=8% Similarity=0.012 Sum_probs=87.3
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcce
Q psy6266 50 VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAR 129 (218)
Q Consensus 50 ~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~ 129 (218)
..|...=-|..+..+|| .+ + ..++|.|+|.++.++++++ +.+||.|+++.=+.=+-...+.+.|+ +|+
T Consensus 203 p~G~I~eAq~~aA~~fg-A~-------~-t~FlvNGST~gn~a~i~a~--~~~gd~Vlv~RN~HKSv~~al~L~ga-~Pv 270 (755)
T PRK15029 203 HTGAFGESEKYAARVFG-AD-------R-SWSVVVGTSGSNRTIMQAC--MTDNDVVVVDRNCHKSIEQGLILTGA-KPV 270 (755)
T ss_pred CCcHHHHHHHHHHHHhC-CC-------c-EEEEeCChhHHHHHHHHHh--cCCCCEEEeecccHHHHHHHHHHcCC-eEE
Confidence 45655555556666666 22 2 2469999999999888776 68999999999998887788899999 888
Q ss_pred eEeccCCcCccc----c-----HHHHHHHHhcCCCCc--------EEEEcccCCCCcHH-----HHHHHhhcCeEEEeeC
Q psy6266 130 EYRYWNPEKRAV----D-----FTGMYEDLVNAPDNS--------VIILHACAHNPTAQ-----QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 130 ~~~~~~~~~~~~----d-----~~~~~~~l~~~~~~~--------~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D 187 (218)
.++-.. +..++ + .+.++++|++.+..+ .+++ .+| +--|. +|+++|.++++.|+.|
T Consensus 271 yl~P~~-~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvl-t~P-TY~Gv~~di~~I~~~~h~~~~~llvD 347 (755)
T PRK15029 271 YMVPSR-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVV-TNC-TYDGVCYNAKEAQDLLEKTSDRLHFD 347 (755)
T ss_pred Eecccc-cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEE-ECC-CCcceeeCHHHHHHHHHhcCCeEEEE
Confidence 874311 12222 3 778888887643222 3333 222 23354 7999999999999999
Q ss_pred Cceee
Q psy6266 188 GRINM 192 (218)
Q Consensus 188 ~r~~y 192 (218)
|+.
T Consensus 348 --EAh 350 (755)
T PRK15029 348 --EAW 350 (755)
T ss_pred --Ccc
Confidence 554
No 274
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=97.73 E-value=0.0013 Score=59.09 Aligned_cols=182 Identities=8% Similarity=0.043 Sum_probs=94.7
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ...|.|.+|.++.+++ .....+. .. ..+....+++.+.. ... ....+++ .-+
T Consensus 37 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~ql~~-~~~~~~~-~~-~~~~~~~la~~l~~-~~p-~~~~~~~--~f~ 107 (421)
T PRK09792 37 VEGNEYIDFAAGIAVLNTG--HRHPDLVAAVEQQLQQ-FTHTAYQ-IV-PYESYVTLAEKINA-LAP-VSGQAKT--AFF 107 (421)
T ss_pred CCCCEEEEccCchhhhcCC--CCCHHHHHHHHHHHHh-ccCcccC-cc-CCHHHHHHHHHHHH-hCC-CCCCceE--EEe
Confidence 4567777776553323345 4467777776665543 1111111 11 12223334444432 110 0011344 355
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHH-HHHhCCC------------cceeEeccCCcCccc----cHHHH
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLV-FLNAGFT------------EAREYRYWNPEKRAV----DFTGM 146 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~-~~~~g~~------------~~~~~~~~~~~~~~~----d~~~~ 146 (218)
.+|++|...++.+.+....-.+|+...-+|-..... +...+.. .+..+|+... ..++ +++.+
T Consensus 108 ~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~-~~~~~~~~~~~~l 186 (421)
T PRK09792 108 TTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSD-LHGISTQDSLDAI 186 (421)
T ss_pred CChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcc-cccccHHHHHHHH
Confidence 688899888887654332235677778777665322 2211210 0111222110 0111 24566
Q ss_pred HHHHhcC--CCC-cEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 147 YEDLVNA--PDN-SVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 147 ~~~l~~~--~~~-~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
++.+++. ..+ ..+++-+ -++|+|. +|.++|++|++++|.| |++.++.+.
T Consensus 187 ~~~~~~~~~~~~iaavi~EP-vq~~~G~~~~~~~~l~~l~~lc~~~g~llI~D--Ev~tg~gr~ 247 (421)
T PRK09792 187 ERLFKSDIEAKQVAAIIFEP-VQGEGGFNVAPKELVAAIRRLCDEHGIVMIAD--EVQSGFART 247 (421)
T ss_pred HHHHHhccCCCceEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe--ccccCCCCC
Confidence 6666531 122 3444444 4888885 7999999999999999 999998554
No 275
>PRK05367 glycine dehydrogenase; Provisional
Probab=97.67 E-value=0.00024 Score=69.63 Aligned_cols=130 Identities=11% Similarity=0.081 Sum_probs=85.9
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHH--hcCCC----eEEecCCCchhHHHHHHHh
Q psy6266 50 VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHR--ILNYT----TFYYSKPTWENHRLVFLNA 123 (218)
Q Consensus 50 ~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~--l~~gd----~V~i~~P~y~~y~~~~~~~ 123 (218)
++|..++-..+.+++.. -.+ . +.+ .++..|+++|-..++.+++. ..+|| .|++++-.+++....+...
T Consensus 537 ~qG~l~~i~e~q~~l~e-ltG--~--d~~-sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~ 610 (954)
T PRK05367 537 AAGYRELIDQLEAWLAE-ITG--Y--DAV-SLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMA 610 (954)
T ss_pred HHHHHHHHHHHHHHHHH-HHC--C--CCE-EECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHC
Confidence 35566666656565533 221 1 233 45666776666554444432 24566 5999999998777888999
Q ss_pred CCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCC
Q psy6266 124 GFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 124 g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~ 188 (218)
|+ +++.++.. . ...+|++.+++.++....+..+++..+|++-.+. +|.+++++++++++.||
T Consensus 611 G~-~vv~v~~d-~-~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDg 677 (954)
T PRK05367 611 GM-KVVVVACD-E-NGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDG 677 (954)
T ss_pred CC-EEEEECCC-C-CCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEEC
Confidence 99 99999873 2 3578999999988753233444444456555332 78899999999999995
No 276
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=97.64 E-value=0.0011 Score=59.51 Aligned_cols=177 Identities=11% Similarity=0.105 Sum_probs=93.5
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCc---cCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNH---EYLPVLGLESFSSAATRMLLGGDASPPLREGRAFG 80 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~---~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~ 80 (218)
..|...||+.-|.....-| ...|.|.+|.++.++. ..+ .+.++....+|-+.+++..-+ -..+++
T Consensus 37 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~ql~~--l~~~~~~~~~~~~~~~la~~l~~~~p~------~~~~~v-- 104 (425)
T PRK07495 37 KEGRRYIDFAAGIAVVNTG--HRHPRVIAAVKAQLDR--FTHTCHQVVPYENYVRLAERLNALVPG------DFAKKT-- 104 (425)
T ss_pred CCCCEEEEccccHHhhccC--CCCHHHHHHHHHHHhh--ccCcccCccCCHHHHHHHHHHHHhCCC------CCCCEE--
Confidence 4577777876664333345 4567788877665543 121 123333333444444333211 011344
Q ss_pred EEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHh-CCC------------cceeEeccCCcCcccc----H
Q psy6266 81 VQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNA-GFT------------EAREYRYWNPEKRAVD----F 143 (218)
Q Consensus 81 ~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~-g~~------------~~~~~~~~~~~~~~~d----~ 143 (218)
.-+.+|++|...++.+.+......+|+...-+|-........+ |.. .+..+|+. ....+.+ +
T Consensus 105 ~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~ 183 (425)
T PRK07495 105 IFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFP-VELHGVSVEQSL 183 (425)
T ss_pred EECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCC-cccccccHHHHH
Confidence 4778889998888876543333457777777776653222111 110 11122221 1111121 3
Q ss_pred HHHHHHHhcC---CCCcEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccCC
Q psy6266 144 TGMYEDLVNA---PDNSVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGLT 196 (218)
Q Consensus 144 ~~~~~~l~~~---~~~~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l~ 196 (218)
+.+++.+.+. .+-..+++-+..+| +|. +|.++|++|++++|.| |+|.++-
T Consensus 184 ~~l~~~~~~~~~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~D--Ev~tG~g 245 (425)
T PRK07495 184 AALDKLFKADVDPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIAD--EVQTGFA 245 (425)
T ss_pred HHHHHHHHhccCCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEe--chhhcCC
Confidence 3445555421 12234555566666 552 7999999999999999 9998873
No 277
>PLN02880 tyrosine decarboxylase
Probab=97.60 E-value=0.0023 Score=58.59 Aligned_cols=143 Identities=11% Similarity=0.059 Sum_probs=91.3
Q ss_pred CcCCCCcHHHHHHHHHHhcCCCCCCCcCCC-----ceEEEEeccChhHHHHHHHHHHH--hc-------CCCeEEecCCC
Q psy6266 47 YLPVLGLESFSSAATRMLLGGDASPPLREG-----RAFGVQTLSGTGALRVGAEFLHR--IL-------NYTTFYYSKPT 112 (218)
Q Consensus 47 Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~-----~v~~~~t~G~~~al~~~~~~l~~--l~-------~gd~V~i~~P~ 112 (218)
|..+.+.-++=+.+.+|+.+ .-+ ++++ .-..++|.|||++...++.+-+. +. +.=.|++++-+
T Consensus 114 ~~~sp~~~~lE~~vi~wl~~-l~g--~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~a 190 (490)
T PLN02880 114 WITSPAATELEMIVLDWLAK-LLN--LPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQT 190 (490)
T ss_pred cccCcccHHHHHHHHHHHHH-HhC--CCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCc
Confidence 44445555666666666532 111 1111 01246889999987665543221 10 11256677777
Q ss_pred chhHHHHHHHhCCCc---ceeEeccCCcCccccHHHHHHHHhcC---CCCcEEEEcccCCCCcHH-----HHHHHhhcCe
Q psy6266 113 WENHRLVFLNAGFTE---AREYRYWNPEKRAVDFTGMYEDLVNA---PDNSVIILHACAHNPTAQ-----QVAHMVDKHH 181 (218)
Q Consensus 113 y~~y~~~~~~~g~~~---~~~~~~~~~~~~~~d~~~~~~~l~~~---~~~~~iil~~~p~NPTG~-----~l~~l~~~~~ 181 (218)
..+....+...|+ . ++.+|....+...+|.+.++++|++. ....++++-....-+||. +|+++|++|+
T Consensus 191 H~Sv~Kaa~~lGl-g~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~ 269 (490)
T PLN02880 191 HSALQKACQIAGI-HPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNG 269 (490)
T ss_pred hHHHHHHHHHcCC-CHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcC
Confidence 7777778888887 4 56777632234578999999998653 122455555566678887 8999999999
Q ss_pred EEEeeCCceeeccC
Q psy6266 182 VYLLRSGRINMCGL 195 (218)
Q Consensus 182 i~ii~D~r~~y~~l 195 (218)
+|+..| -+|.+.
T Consensus 270 iwlHVD--aA~gg~ 281 (490)
T PLN02880 270 MWFHVD--AAYAGS 281 (490)
T ss_pred CEEEEe--hhhHHH
Confidence 999999 788775
No 278
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=97.57 E-value=0.0027 Score=57.31 Aligned_cols=186 Identities=12% Similarity=0.032 Sum_probs=93.7
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCc-cCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNH-EYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
-..|...||+.-|.....-| ...|.|.+|.++.++.....+ .|.++.-..+|-+.+++..-+ . ....++ ++
T Consensus 35 D~dG~~ylD~~~g~~~~~lG--h~~p~i~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p~-~----~~~~~~-~f 106 (442)
T TIGR00709 35 DVEGKEYLDFLAGAGTLALG--HNHPNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPK-R----KMDYKL-QF 106 (442)
T ss_pred eCCCCEEEEccccHhhhcCC--CCCHHHHHHHHHHHHhccCccccccCcHHHHHHHHHHHHhCCC-c----CCCccE-EE
Confidence 34677788887665444445 456778877666553310011 123333333333333333211 0 001232 34
Q ss_pred EeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHh-CC-----------CcceeEeccCCcCc------cccH
Q psy6266 82 QTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNA-GF-----------TEAREYRYWNPEKR------AVDF 143 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~-g~-----------~~~~~~~~~~~~~~------~~d~ 143 (218)
.+.+|++|...++++.+....-.+|+...-+|.......... +. ..+..+++...... ..+.
T Consensus 107 ~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (442)
T TIGR00709 107 PGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGS 186 (442)
T ss_pred eCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHH
Confidence 567889999988886544433356777777777654333222 10 01222222100000 0011
Q ss_pred H----HHHHHHh---cC-CCCcEEEEcccCCCCcHH--------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 144 T----GMYEDLV---NA-PDNSVIILHACAHNPTAQ--------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 144 ~----~~~~~l~---~~-~~~~~iil~~~p~NPTG~--------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
+ .+++.+. .. .+...+++-+-++|+... ++.++|++|++++|.| |++.||-..
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~D--EV~tGfGRt 255 (442)
T TIGR00709 187 NASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILD--EVQAGFGRS 255 (442)
T ss_pred HHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe--ccccCCCCC
Confidence 1 1223332 11 223445554544443222 7999999999999999 999998543
No 279
>KOG0053|consensus
Probab=97.54 E-value=0.00051 Score=60.75 Aligned_cols=101 Identities=13% Similarity=0.137 Sum_probs=73.1
Q ss_pred EEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHh----CCCcceeEeccCCcCccccHHHHHHHHhcCCC
Q psy6266 80 GVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNA----GFTEAREYRYWNPEKRAVDFTGMYEDLVNAPD 155 (218)
Q Consensus 80 ~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~----g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 155 (218)
++.++.|+.|+..++..| +.+|+.++..+..|..-..+++.. |+ +...+. .-+++.+.++++ +
T Consensus 95 ~l~fsSGmaA~~~al~~L--~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gi-e~~~vd-------~~~~~~~~~~i~---~ 161 (409)
T KOG0053|consen 95 ALLFSSGMAAITVALLHL--LPAGDHIVATGDVYGGTLRILRKFLPKFGG-EGDFVD-------VDDLKKILKAIK---E 161 (409)
T ss_pred EEEecccHHHHHHHHHHh--cCCCCcEEEeCCCcccHHHHHHHHHHHhCc-eeeeec-------hhhHHHHHHhhc---c
Confidence 457888888888887766 567999999999999877766654 32 222221 125566666664 3
Q ss_pred CcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 156 NSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 156 ~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
++.+++.=+|.||+.. .+.++|++++++++-| ..+...
T Consensus 162 ~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVD--nTf~~p 204 (409)
T KOG0053|consen 162 NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVD--NTFGSP 204 (409)
T ss_pred CceEEEEECCCCCccccccHHHHHHHHhhCCCEEEEe--CCcCcc
Confidence 4555555799999998 7999999999999999 666554
No 280
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=97.54 E-value=0.00084 Score=59.36 Aligned_cols=143 Identities=15% Similarity=0.121 Sum_probs=88.3
Q ss_pred cCcCCCCcHHHHHHHHHHh---cCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHH-hc-----CC-----C-eEEecC
Q psy6266 46 EYLPVLGLESFSSAATRML---LGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHR-IL-----NY-----T-TFYYSK 110 (218)
Q Consensus 46 ~Y~~~~G~~~lr~aia~~~---~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~-l~-----~g-----d-~V~i~~ 110 (218)
.|.-+...-++=+.+.+++ ++ -.........-..+.|.||+++...++.+.+. +. .| + .|++++
T Consensus 70 ~~~~~P~~~~~E~~vi~~l~~l~g-~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~ 148 (373)
T PF00282_consen 70 TWEASPAATEIEREVIRWLADLFG-LPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSE 148 (373)
T ss_dssp STTTSHHHHHHHHHHHHHHHHHTT-GSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEET
T ss_pred ccccccccccchHHHHHHHHHHhC-CcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccc
Confidence 3444444555555565555 33 11000111113467999999988766554322 11 12 2 466666
Q ss_pred CCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCC-C--CcEEEEcccCCCCcHH-----HHHHHhhcCeE
Q psy6266 111 PTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAP-D--NSVIILHACAHNPTAQ-----QVAHMVDKHHV 182 (218)
Q Consensus 111 P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~--~~~iil~~~p~NPTG~-----~l~~l~~~~~i 182 (218)
=+..+-.......|+ .++.+|.. + ...+|++.+++.|++.. . ..++++-+...-.||. +|.++|+++++
T Consensus 149 ~aH~S~~Kaa~~lGl-g~~~I~~~-~-~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~ 225 (373)
T PF00282_consen 149 QAHYSIEKAARILGL-GVRKIPTD-E-DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNI 225 (373)
T ss_dssp TS-THHHHHHHHTTS-EEEEE-BB-T-TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-
T ss_pred ccccHHHHhcceeee-EEEEecCC-c-chhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccce
Confidence 577777788899999 89999884 2 46789999998886531 2 1334444566667786 89999999999
Q ss_pred EEeeCCceeecc
Q psy6266 183 YLLRSGRINMCG 194 (218)
Q Consensus 183 ~ii~D~r~~y~~ 194 (218)
|+-.| -+|.|
T Consensus 226 wlHVD--aA~gg 235 (373)
T PF00282_consen 226 WLHVD--AAYGG 235 (373)
T ss_dssp EEEEE--ETTGG
T ss_pred eeeec--ccccc
Confidence 99999 88888
No 281
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=97.52 E-value=0.002 Score=56.83 Aligned_cols=176 Identities=12% Similarity=0.038 Sum_probs=94.9
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
-..|...||+.-|.....-| ...|.|.+|.++.++.........+..-..+|-+.++++. + .+++ +-
T Consensus 20 D~dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~l~~~~-~--------~~~v--~~ 86 (364)
T PRK04013 20 DSQGRRYLDLIAGIGVNVLG--HNHPEWVEEMSEQLEKLVVAGPMFEHEEKEEMLEELSKWV-N--------YEYV--YM 86 (364)
T ss_pred ECCCCEEEEcccChhhccCC--CCCHHHHHHHHHHHHhcCCccCCcCCHHHHHHHHHHHhhc-C--------CCEE--EE
Confidence 35688888886664333445 3456677776665543111111122322334444444332 2 1343 47
Q ss_pred eccChhHHHHHHHHHHHhcCC-CeEEecCCCchhHHHHHHHhCCCccee----EeccCCcC---ccccHHHHHHHHhcCC
Q psy6266 83 TLSGTGALRVGAEFLHRILNY-TTFYYSKPTWENHRLVFLNAGFTEARE----YRYWNPEK---RAVDFTGMYEDLVNAP 154 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~g-d~V~i~~P~y~~y~~~~~~~g~~~~~~----~~~~~~~~---~~~d~~~~~~~l~~~~ 154 (218)
+.+|++|...++.+.... +| ++|+..+-+|.......-.... .+.. -|.+ .+. .-.|.+.+++.+.+
T Consensus 87 ~~SGseA~e~Alklar~~-~gr~~Ii~~~~syHG~t~~~ls~~~-~~~~~~~~~p~~-~~~~~~~~~d~~~l~~~i~~-- 161 (364)
T PRK04013 87 GNSGTEAVEAALKFARLY-TGRKEIIAMTNAFHGRTMGALSATW-KPKYREDFEPLV-PGFKHIPFNDVEAAKEAITK-- 161 (364)
T ss_pred eCchHHHHHHHHHHHHHH-hCCCEEEEECCccccCchhhccCCC-CcccccCCCCCC-CCcEEecCCCHHHHHHHhcC--
Confidence 788999999998876543 56 8999998888775432222111 1100 0110 000 01156667666642
Q ss_pred CCcEEEEcccCC------CCcHH--HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 155 DNSVIILHACAH------NPTAQ--QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 155 ~~~~iil~~~p~------NPTG~--~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
+...+++-+-.. -|.+. ++.++|++|++.+|.| |+..|+-.+
T Consensus 162 ~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~D--Ev~tG~RtG 211 (364)
T PRK04013 162 ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIAD--EVQSGLRTG 211 (364)
T ss_pred CcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe--chhhcCCCC
Confidence 222333332222 12233 7999999999999999 998887444
No 282
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=97.49 E-value=0.0015 Score=60.02 Aligned_cols=102 Identities=11% Similarity=0.109 Sum_probs=77.7
Q ss_pred EEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCc----cccHHHHHHHHhcCCC
Q psy6266 80 GVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKR----AVDFTGMYEDLVNAPD 155 (218)
Q Consensus 80 ~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~----~~d~~~~~~~l~~~~~ 155 (218)
-+++.|.|.|...+.+++ +.+||.|+++..+.=+....+.++|+ +|+++.-.....+ +++.+.+.+++.+.+.
T Consensus 89 yFvvNGTS~ank~vi~a~--~~~GD~VLvdRN~HKSi~~glilaGa-~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~ 165 (557)
T COG1982 89 YFVVNGTSTANKAVINAV--LTPGDKVLVDRNCHKSIHHGLILAGA-TPVYLEPSRNPLYGIIGGIPLETFKEALLAHPD 165 (557)
T ss_pred EEEECCccHHHHHHHHhh--cCCCCEEEecCCccHHHHHHHHHcCC-ceEEecCCCCccccccCCCCHHHHHHHHHhChh
Confidence 469999999999988877 67999999999998887777888999 8888754222223 4488999988876544
Q ss_pred C-cEEEEcccCCCCc--HH-----HHHHHhhcCeEEEeeCC
Q psy6266 156 N-SVIILHACAHNPT--AQ-----QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 156 ~-~~iil~~~p~NPT--G~-----~l~~l~~~~~i~ii~D~ 188 (218)
. ..+++ .||| |. +|.+.+.+.++|+.-|+
T Consensus 166 ~~k~~vi----tnpTYdGv~~n~~~i~~~~~~~~a~v~~de 202 (557)
T COG1982 166 AEKLAVI----TNPTYDGVCYNLRKIVELLHHYGAWVLYDE 202 (557)
T ss_pred hheeEEE----ecCccceEeecHHHHHHHHhhcCceEEhhh
Confidence 4 34444 3444 33 88999999999999995
No 283
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=97.47 E-value=0.00059 Score=66.41 Aligned_cols=134 Identities=11% Similarity=0.138 Sum_probs=88.5
Q ss_pred ccCcC---CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHh------cCCCeEEecCCCchh
Q psy6266 45 HEYLP---VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRI------LNYTTFYYSKPTWEN 115 (218)
Q Consensus 45 ~~Y~~---~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l------~~gd~V~i~~P~y~~ 115 (218)
|.|.| ++|..++-....+++.. -.+ .+ .+ +++..|+++|-..++++++.. ..-++|++|.-..+.
T Consensus 517 hPyqPe~~sqG~lq~i~elq~~l~e-ltG--md--~~-Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgt 590 (939)
T TIGR00461 517 HPFQPSNQVEGYQELIAQLEKWLCS-ITG--FD--AI-SLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGT 590 (939)
T ss_pred CCCCchHHhHHHHHHHHHHHHHHHH-HHC--CC--Cc-ccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCc
Confidence 44554 35655555555555532 111 22 22 457777777666555554421 123578899888855
Q ss_pred HHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH------HHHHHhhcCeEEEeeCC
Q psy6266 116 HRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ------QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 116 y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~------~l~~l~~~~~i~ii~D~ 188 (218)
.....+..|+ +++.++.. +...+|++.+++.+.+...++.+++..+|+| +|. +|.+++++++.+++-||
T Consensus 591 nPasa~~~G~-~Vv~V~~d--~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDg 665 (939)
T TIGR00461 591 NPASAAMAGM-QVVPVNCD--QDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDG 665 (939)
T ss_pred CHHHHHHCCC-EEEEeccC--CCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEe
Confidence 5666788999 99999873 3467899999999975323455565667888 786 68899999989999995
No 284
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.47 E-value=0.0035 Score=56.16 Aligned_cols=179 Identities=12% Similarity=0.071 Sum_probs=93.1
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCcc--CcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHE--YLPVLGLESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~--Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
..|...||+.-|.....-| ...|.|.+|.++.++. ..... ..+. +.+..+++++.. .. + -..+++ .
T Consensus 39 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~q~~~-~~~~~~~~~~~----~~~~~la~~l~~-~~-p-~~~~~v--~ 106 (423)
T PRK05964 39 ADGRELIDAISSWWVATHG--HNHPYIDQAIREQLDR-LDHVIFAGFTH----EPAERLAQRLVA-LT-P-GGLDHV--F 106 (423)
T ss_pred CCCCEEEEcchhHHhccCC--CCCHHHHHHHHHHHhh-CCCccccccCC----HHHHHHHHHHHH-hC-C-CCCCEE--E
Confidence 4577778887664433455 4467888887666543 11111 1122 233444555432 11 0 011344 4
Q ss_pred EeccChhHHHHHHHHHHHhc-----CC-CeEEecCCCchhHHHHHHHhCCCc------------ceeEeccCCcCccccH
Q psy6266 82 QTLSGTGALRVGAEFLHRIL-----NY-TTFYYSKPTWENHRLVFLNAGFTE------------AREYRYWNPEKRAVDF 143 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~-----~g-d~V~i~~P~y~~y~~~~~~~g~~~------------~~~~~~~~~~~~~~d~ 143 (218)
-+.+|++|...++++.+... +| .+|+...-+|.............. ...+++...+....++
T Consensus 107 f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 186 (423)
T PRK05964 107 FSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATL 186 (423)
T ss_pred EeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHH
Confidence 67888898888877654331 33 478888877776433222222101 1111110000000125
Q ss_pred HHHHHHHhcCCCCc-EEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccCC
Q psy6266 144 TGMYEDLVNAPDNS-VIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGLT 196 (218)
Q Consensus 144 ~~~~~~l~~~~~~~-~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l~ 196 (218)
+.+++.+.+..... .+++-+-.++.+|. +|.++|++|++.+|.| |++.++-
T Consensus 187 ~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~D--Ev~tg~g 247 (423)
T PRK05964 187 DALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFD--EIATGFG 247 (423)
T ss_pred HHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEe--chhhCCC
Confidence 66666665332222 23332212444443 7999999999999999 9988773
No 285
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=97.45 E-value=0.0042 Score=56.24 Aligned_cols=185 Identities=8% Similarity=0.015 Sum_probs=91.0
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
-..|...||+.-|.....-| .-.|.|.+|.++.++. ..+..... -.-+.+..+++++.. .-.. ...+++ .-
T Consensus 50 D~dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~q~~~--~~~~~~~~-~~~~~~~~la~~L~~-~~p~-~~~~~v--~f 120 (451)
T PRK06918 50 DVDGNQYIDFAGAIGTINVG--HSHPKVKEALHKQVDQ--YIHTGFNV-MMYEPYIELAEKLAA-LAPG-SFDKKV--LF 120 (451)
T ss_pred eCCCCEEEEcCCchhhcCCC--CCCHHHHHHHHHHHHh--ccCccccc-cccHHHHHHHHHHHH-hCCC-CCCCEE--EE
Confidence 34677778876665333445 4567788887665543 22111110 112233444455432 1100 011344 57
Q ss_pred eccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCc-------------ceeEeccCC--cCcccc-----
Q psy6266 83 TLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTE-------------AREYRYWNP--EKRAVD----- 142 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~-------------~~~~~~~~~--~~~~~d----- 142 (218)
+.+|++|...++.+-+....-..|+...-+|-........+.... +..+|+... ...+..
T Consensus 121 ~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (451)
T PRK06918 121 LNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYD 200 (451)
T ss_pred cCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHH
Confidence 888899988888765444333567777777766543222221100 111111000 000110
Q ss_pred ---HHHHHHHHhc-CCCCcEEEEcccCCCCcHH----------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 143 ---FTGMYEDLVN-APDNSVIILHACAHNPTAQ----------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 143 ---~~~~~~~l~~-~~~~~~iil~~~p~NPTG~----------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
.+.+.+.+.. ..+..+.-++.-|-+.+|. +|.++|++|++++|.| |+|.++.+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~D--EV~tg~gr~ 268 (451)
T PRK06918 201 DFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVAD--EIQTGFART 268 (451)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe--ccccCcCcc
Confidence 1122322221 1122232222234444321 7999999999999999 999998654
No 286
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=97.44 E-value=0.00069 Score=60.22 Aligned_cols=124 Identities=19% Similarity=0.176 Sum_probs=74.6
Q ss_pred cHHHHHHHHHHhcCCCCCCCcCCCce-EEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHH---H--H-----H
Q psy6266 53 LESFSSAATRMLLGGDASPPLREGRA-FGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRL---V--F-----L 121 (218)
Q Consensus 53 ~~~lr~aia~~~~~~~~~~~~~~~~v-~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~---~--~-----~ 121 (218)
++.|....+..+|+ - .++.. .-++..+|+.|...++.+| ++|||+|+..++.-+.|.. . . .
T Consensus 67 iE~la~~ra~~lF~-~-----~~~~w~anvqp~SGs~An~av~~aL--l~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~ 138 (399)
T PF00464_consen 67 IEELAIERAKELFG-A-----EPKEWYANVQPHSGSQANLAVYMAL--LKPGDTIMGLSLPHGGHLSHGSSVNFKKISAS 138 (399)
T ss_dssp HHHHHHHHHHHHHT-------STTTEEEE---SSHHHHHHHHHHHH--T-TT-EEEEEEGGGT--GGGT-TTSHSBSSHH
T ss_pred HHHHHHHHHHHHhC-C-----CcccceEEeecCCchHHHHHHHHHH--HhhcCcEEecChhhcccccccccccccccccc
Confidence 66777777778887 3 22322 2357778888988888887 7899999999999877752 1 1 1
Q ss_pred HhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEc-ccCCCCcHH-HHHHHhhcCeEEEeeC
Q psy6266 122 NAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILH-ACAHNPTAQ-QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 122 ~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~-~~p~NPTG~-~l~~l~~~~~i~ii~D 187 (218)
.... +.+.|+.. ++...+|++.+++.+++..|+ .|++= .++.-|--. .+.++|.+.+.+++.|
T Consensus 139 ~~~~-~~~~y~~d-~~~~~ID~d~l~~~a~~~kPk-lIi~G~S~y~~~~d~~~~reIad~vga~l~~D 203 (399)
T PF00464_consen 139 GLYF-ESVPYPVD-PDTGLIDYDELEKLAKEHKPK-LIICGASSYPRPIDFKRFREIADEVGAYLMAD 203 (399)
T ss_dssp HHHS-EEEEEEB--TTTSSB-HHHHHHHHHHH--S-EEEEE-SSTSS---HHHHHHHHHHTT-EEEEE
T ss_pred cceE-EEEeeeee-cCCCeECHHHHHHHHhhcCCC-EEEECchhccCccCHHHHHHHHHhcCcEEEec
Confidence 1234 56677763 456788999999988765333 33331 122222222 7889999999999999
No 287
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=97.43 E-value=0.0028 Score=55.98 Aligned_cols=175 Identities=13% Similarity=0.097 Sum_probs=104.5
Q ss_pred CCCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCC-CCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEE
Q psy6266 2 YMSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDS-LNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFG 80 (218)
Q Consensus 2 ~~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~ 80 (218)
|-..|...||+..|.--..-| ...|.+.+|.++-.+..- ..+-|. -+.+.++++++-. ... ..++|
T Consensus 37 ~D~~G~~YlDf~~Giav~~lG--H~hP~iv~al~~Q~~kl~h~sn~~~-----~~~~~~la~~L~~-~s~---~~d~v-- 103 (404)
T COG4992 37 WDQQGREYLDFAAGIAVNNLG--HCHPALVEALKEQAEKLWHVSNLFY-----NEPQAELAEKLVE-LSP---FADRV-- 103 (404)
T ss_pred ECCCCCEeeeeccceeeeccC--CCCHHHHHHHHHHHHHhhhcccccC-----ChHHHHHHHHHHh-hCc---cccEE--
Confidence 346788999998887666777 557888888766443210 011121 2345556666643 210 24665
Q ss_pred EEeccChhHHHHHHHHHHHhcC---CCeEEecCCCchhHHHHHHHhCCCcceeEeccCC--cCccc----cHHHHHHHHh
Q psy6266 81 VQTLSGTGALRVGAEFLHRILN---YTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP--EKRAV----DFTGMYEDLV 151 (218)
Q Consensus 81 ~~t~G~~~al~~~~~~l~~l~~---gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~--~~~~~----d~~~~~~~l~ 151 (218)
+-+++|++|...++.+-+++-. -.+++...=+|.......-+++. ++++...+.+ ..+.. |++++++++.
T Consensus 104 ff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~-~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~ 182 (404)
T COG4992 104 FFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATG-QPKYRKGFGPLLPGFRHVPFNDIEALEAAID 182 (404)
T ss_pred EEcCCcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccC-ChhhccCCCCCCCCceecCCCCHHHHHHHhc
Confidence 5889999999999987666532 23677777777665433334444 4533222211 11111 8899999997
Q ss_pred cCCCCcEEEEcccCCC-------CcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 152 NAPDNSVIILHACAHN-------PTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 152 ~~~~~~~iil~~~p~N-------PTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
+ .+..++.=.=+- |.|. .+.++|++|++.+|.| |+=.|+
T Consensus 183 ~---~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~D--EVQtG~ 230 (404)
T COG4992 183 E---DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILD--EVQTGL 230 (404)
T ss_pred c---CeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEe--ccccCC
Confidence 5 333333210111 2233 7999999999999999 887776
No 288
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=97.43 E-value=0.0013 Score=59.45 Aligned_cols=157 Identities=17% Similarity=0.100 Sum_probs=89.2
Q ss_pred ceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcC---CCC------cHH-HHHHHHHHhcCCCCCCCcCCCc
Q psy6266 8 IHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLP---VLG------LES-FSSAATRMLLGGDASPPLREGR 77 (218)
Q Consensus 8 ~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~---~~G------~~~-lr~aia~~~~~~~~~~~~~~~~ 77 (218)
..|||-... + .+++.|++++....... ....|.. ..| +++ -|+.+++++ + .++++
T Consensus 35 ~~l~l~~se----n---~~s~~v~~~~~~~l~~~-y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf-~------a~~~~ 99 (452)
T PTZ00094 35 EGLELIASE----N---FTSRAVLECLGSCFTNK-YAEGLPGNRYYGGNEVVDKIENLCQKRALEAF-G------LDPEE 99 (452)
T ss_pred cCeeEeccc----c---cCCHHHHHHhcchhhcc-ccCCCCCccccccchHHHHHHHHHHHHHHHHh-C------CCccc
Confidence 345666663 2 46788888876655321 0001111 233 222 334444443 3 22344
Q ss_pred e-EEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHh--------C--CCcceeEeccCCcCccccHHHH
Q psy6266 78 A-FGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNA--------G--FTEAREYRYWNPEKRAVDFTGM 146 (218)
Q Consensus 78 v-~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~--------g--~~~~~~~~~~~~~~~~~d~~~~ 146 (218)
+ ..+++.+++++..+++.++ +.|||.|++.+.-++.+....... + . .+..++. +. ...+|.+.+
T Consensus 100 ~~~~~~~~sgt~an~~v~~al--~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~-~~~~~~~-~~-~g~id~~~L 174 (452)
T PTZ00094 100 WGVNVQPYSGSPANFAVYTAL--LQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYF-ESLPYQV-NE-KGLIDYDKL 174 (452)
T ss_pred ceeecCCCchHHHHHHHHHHh--cCCCCEEEecccccCCcccccccccccccccceeee-eeeeccc-CC-CCCcCHHHH
Confidence 3 2234478888888888877 679999999877766654322110 1 1 1223322 22 356799999
Q ss_pred HHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCC
Q psy6266 147 YEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 147 ~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~ 188 (218)
++.+++..++ .+++ . ++.+|. +|.++|++++++++.|+
T Consensus 175 ~~~l~~~~~~-lvi~--~-~s~~g~~~di~~I~~i~~~~ga~l~vDa 217 (452)
T PTZ00094 175 EELAKAFRPK-LIIA--G-ASAYPRDIDYKRFREICDSVGAYLMADI 217 (452)
T ss_pred HHHHHHhCCC-EEEE--e-CCCCCCccCHHHHHHHHHHcCCEEEEec
Confidence 9998643232 3333 1 334776 78999999999999994
No 289
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=97.42 E-value=0.0048 Score=55.36 Aligned_cols=180 Identities=12% Similarity=0.070 Sum_probs=91.6
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccC--cCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEY--LPVLGLESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y--~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
..|...||+.-|.....-| ...|.|.+|.++.++. .....+ .+.....+|-+.+++..-. -..+++ .
T Consensus 37 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~ql~~-~~~~~~~~~~~~~~~~la~~l~~~~p~------~~~~~~--~ 105 (421)
T PRK06777 37 VEGREYIDFAAGIAVLNTG--HRHPKVVAAVRQQLDQ-FTHTAYQIVPYASYVTLAERINALAPI------DGPAKT--A 105 (421)
T ss_pred CCCCEEEEcccCHHhhccC--CCCHHHHHHHHHHHhh-cccccccccCChHHHHHHHHHHHhCCC------CCCceE--E
Confidence 4577777876653322344 4466777777666543 111112 2232233344444332210 011344 3
Q ss_pred EeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcc-------------eeEeccCCcCcc----ccHH
Q psy6266 82 QTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEA-------------REYRYWNPEKRA----VDFT 144 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~-------------~~~~~~~~~~~~----~d~~ 144 (218)
-+.+|++|...++++.+....-..|+...-+|-.............. ..+++. ....+ .+++
T Consensus 106 f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~ 184 (421)
T PRK06777 106 FFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYP-NELHGVSVEEALS 184 (421)
T ss_pred EeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCC-ccccCcCHHHHHH
Confidence 56788898888887654332234677777777665432222211011 111110 00001 1355
Q ss_pred HHHHHHhc--CCCC-cEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 145 GMYEDLVN--APDN-SVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 145 ~~~~~l~~--~~~~-~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
.+++.+.+ ...+ ..+++- .-++..|. +|.++|++|++++|.| |+|.++.+.
T Consensus 185 ~l~~~~~~~~~~~~iaavi~E-pv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~D--Ev~tg~gr~ 247 (421)
T PRK06777 185 SVERLFKADIAPDQVAAILLE-PIQGEGGFNVAPPEFMSALRTLCDEHGILLIAD--EVQTGFART 247 (421)
T ss_pred HHHHHHHhccCCCceEEEEEC-CccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe--chhhCCccC
Confidence 56666642 1122 233332 23444442 7999999999999999 999998544
No 290
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.41 E-value=0.0016 Score=63.38 Aligned_cols=136 Identities=15% Similarity=0.142 Sum_probs=88.4
Q ss_pred CccCcC---CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHh-----cC-CCeEEecCCCch
Q psy6266 44 NHEYLP---VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRI-----LN-YTTFYYSKPTWE 114 (218)
Q Consensus 44 ~~~Y~~---~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l-----~~-gd~V~i~~P~y~ 114 (218)
.|-|.| ++|..+....+.+++.. +..-.+..++-.++..|-..++++++.. ++ .++|+++.-.++
T Consensus 529 ~hPyqp~e~sQG~lq~i~elq~~l~e------LtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHg 602 (954)
T PRK12566 529 LHPFAPREQAEGYRAMIDELEAWLCA------ITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHG 602 (954)
T ss_pred CCCCCchhhhcCHHHHHHHHHHHHHH------HHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccc
Confidence 367888 88987777666665533 1111223445445566665566665431 12 367788877664
Q ss_pred hHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCC
Q psy6266 115 NHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 115 ~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~ 188 (218)
.........|+ +++.++.. + ...+|++.+++.+.+..++...+.+.+|++=.+. +|.+++++++..++-||
T Consensus 603 tNpasa~~~Gi-eVv~Vp~D-~-~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDg 678 (954)
T PRK12566 603 TNPASAQMAGM-RVVIVECD-P-DGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDG 678 (954)
T ss_pred cCHHHHHHCCC-EEEEeccC-C-CCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEe
Confidence 44555677899 89999873 3 4578999999999744345555555555554443 68899999999988897
No 291
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=97.39 E-value=0.0072 Score=54.10 Aligned_cols=182 Identities=10% Similarity=-0.001 Sum_probs=93.0
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCC--CCCcCCCceEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDA--SPPLREGRAFGV 81 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~--~~~~~~~~v~~~ 81 (218)
..|...||+.-|.....-| ...|.|.+|.++.+++ ..+.+.. .-.-+.+..+++++.. .- .... .+++ .+
T Consensus 32 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~ql~~--~~~~~~~-~~~~~~~~~lae~l~~-~~~~~~~~-~~~~-~f 103 (412)
T TIGR02407 32 EDGKEYIDFFAGAGALNYG--HNNPKLKQALIDYLAD--DGIIHSL-DMATEAKREFLETFNE-IILKPRGL-DYKV-QF 103 (412)
T ss_pred CCCCEEEEcccchhhccCC--CCCHHHHHHHHHHHhh--ccceecc-ccCcHHHHHHHHHHHH-hccCccCC-CceE-EE
Confidence 4577778876664333445 4577888887665532 1111111 1112333344444432 10 0001 1233 23
Q ss_pred EeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCc------------ceeEeccCCcC-ccccHHHHHH
Q psy6266 82 QTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTE------------AREYRYWNPEK-RAVDFTGMYE 148 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~------------~~~~~~~~~~~-~~~d~~~~~~ 148 (218)
.+.+|++|...++++.+......+|+...-+|-............. ...+|+..... ..-+++.+++
T Consensus 104 ~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~ 183 (412)
T TIGR02407 104 PGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEK 183 (412)
T ss_pred eCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHH
Confidence 4578899998888865444333578877877776543222221101 11122100000 0013555666
Q ss_pred HHhcCC---CCcEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 149 DLVNAP---DNSVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 149 ~l~~~~---~~~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
.+.+.. .....++.-.-+++.|. +|.++|++|++++|.| |++.|+
T Consensus 184 ~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~D--EV~tG~ 240 (412)
T TIGR02407 184 LLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVD--DIQAGC 240 (412)
T ss_pred HHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe--chhhCC
Confidence 665321 12233333334554553 7999999999999999 999876
No 292
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=97.37 E-value=0.0029 Score=53.15 Aligned_cols=120 Identities=16% Similarity=0.086 Sum_probs=84.0
Q ss_pred cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCC-chhHHHHHHHhCCCcceeE
Q psy6266 53 LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPT-WENHRLVFLNAGFTEAREY 131 (218)
Q Consensus 53 ~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~-y~~y~~~~~~~g~~~~~~~ 131 (218)
+..|.+-+++++ + - +.+. +|.|+-+|.++++.++ ..+||.|++..-. |.+|. ..+.+|+ ++..+
T Consensus 63 I~~F~~dlaeFl-g-~-------D~~R--~t~GARe~KfavMhal--~~~gd~vV~D~~aHYttyv-AAEragl-~v~eV 127 (382)
T COG1103 63 IKDFLEDLAEFL-G-M-------DEVR--VTAGAREAKFAVMHAL--CKEGDWVVVDSLAHYTTYV-AAERAGL-NVAEV 127 (382)
T ss_pred HHHHHHHHHHHh-C-C-------ceee--ecccchhhHHHHHHHh--ccCCCEEEEcCcchHHHHH-HHHhcCC-eEEec
Confidence 566777777765 2 1 2233 8999999999999988 5689999887554 66665 5578999 89999
Q ss_pred eccCCcCccccHHHHHHHHhcCC-C--C-cE-EEE-c--ccCCCCcHH-HHHHHhhcCeEEEeeC
Q psy6266 132 RYWNPEKRAVDFTGMYEDLVNAP-D--N-SV-IIL-H--ACAHNPTAQ-QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 132 ~~~~~~~~~~d~~~~~~~l~~~~-~--~-~~-iil-~--~~p~NPTG~-~l~~l~~~~~i~ii~D 187 (218)
|-..-....++.+...+.|++.. + . .. +++ + .+..|-+-+ .++++|+++++.++-.
T Consensus 128 p~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN 192 (382)
T COG1103 128 PNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLN 192 (382)
T ss_pred CCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEee
Confidence 86433446678888777776531 1 1 22 222 2 245666555 8999999999999977
No 293
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=97.37 E-value=0.0013 Score=57.36 Aligned_cols=118 Identities=17% Similarity=0.188 Sum_probs=84.9
Q ss_pred cCcCC--CCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHH---
Q psy6266 46 EYLPV--LGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVF--- 120 (218)
Q Consensus 46 ~Y~~~--~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~--- 120 (218)
-|+-. .-...|-+.++.+--| +..+-|.+|+.|+..++.-+ +.+||.|+..+--|+.-...|
T Consensus 55 iYsRi~NPT~~vlE~RiAaLEGG-----------~aa~a~aSG~AA~~~ai~~l--a~aGD~iVss~~LYGGT~~lf~~t 121 (426)
T COG2873 55 IYTRIMNPTTDVLEERIAALEGG-----------VAALAVASGQAAITYAILNL--AGAGDNIVSSSKLYGGTYNLFSHT 121 (426)
T ss_pred eeeeccCchHHHHHHHHHHhhcc-----------hhhhhhccchHHHHHHHHHh--ccCCCeeEeeccccCchHHHHHHH
Confidence 35542 3456677777765433 22356778888888877655 579999999988888755544
Q ss_pred -HHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeC
Q psy6266 121 -LNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 121 -~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D 187 (218)
+..|. ++..+ +. .|.+.+++++. +++++++.=+-.||-+. .|+++|++|++.+|.|
T Consensus 122 l~~~Gi-~v~fv---d~----~d~~~~~~aI~---~nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVD 183 (426)
T COG2873 122 LKRLGI-EVRFV---DP----DDPENFEAAID---ENTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVD 183 (426)
T ss_pred HHhcCc-EEEEe---CC----CCHHHHHHHhC---cccceEEEEeccCCCccccCHHHHHHHHHHcCCcEEEe
Confidence 55677 66665 22 36889999886 45566665678999886 7999999999999999
No 294
>PLN02955 8-amino-7-oxononanoate synthase
Probab=97.36 E-value=0.021 Score=51.97 Aligned_cols=166 Identities=11% Similarity=0.006 Sum_probs=94.5
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCC-CCccCcCCCCc----HHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDS-LNHEYLPVLGL----ESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~~Y~~~~G~----~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
...+|++-=.|- | ....|.|+++..+.+++-+ +...-....|. .+|=+++++++.. +. ++
T Consensus 102 r~~l~FsSndYL---G-L~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~---------e~--al 166 (476)
T PLN02955 102 KKLLLFSGNDYL---G-LSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKK---------ED--CL 166 (476)
T ss_pred ceEEEeeccCcc---C-CCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCC---------Cc--EE
Confidence 367888777663 2 4556778877776665411 11111124565 6677788877633 22 23
Q ss_pred EeccChhHHHHHHHHHHH------------hcCCCeEEecCCC-chhHHHHHHHh----CCCcceeEeccCCcCccccHH
Q psy6266 82 QTLSGTGALRVGAEFLHR------------ILNYTTFYYSKPT-WENHRLVFLNA----GFTEAREYRYWNPEKRAVDFT 144 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~------------l~~gd~V~i~~P~-y~~y~~~~~~~----g~~~~~~~~~~~~~~~~~d~~ 144 (218)
+.+.|-.|-..++.+|.. ...+|.| +.|.. ..+-..-+++. ++ +++.|+ ..|++
T Consensus 167 l~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i-~~D~~~HaSI~dG~~ls~~~~~a-~~~~f~-------HND~~ 237 (476)
T PLN02955 167 VCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAI-FSDALNHASIIDGVRLAERQGNV-EVFVYR-------HCDMY 237 (476)
T ss_pred EECChHHHHHHHHHHHhhccccccccccccCCCCcEE-EEeccchHHHHHHHHhccccCCc-eEEEeC-------CCCHH
Confidence 555555544444444310 0223444 44554 33333333433 23 333332 23788
Q ss_pred HHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 145 GMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 145 ~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
.+++.|++.+.+..+++.-.--++.|. +|.+++++|+.++|-| |++.....+
T Consensus 238 ~Le~~L~~~~~~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiVD--EAH~~Gv~G 294 (476)
T PLN02955 238 HLNSLLSSCKMKRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVID--DAHGTFVCG 294 (476)
T ss_pred HHHHHHHhCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEc--ccccCceec
Confidence 888888765333445555556778885 8999999999999999 888755544
No 295
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=97.35 E-value=0.0019 Score=59.65 Aligned_cols=112 Identities=10% Similarity=0.016 Sum_probs=77.8
Q ss_pred EEEeccChhHHHHHHHHHHH--hc----------------------CCCeEEecCCCchhHHHHHHHhCC--CcceeEec
Q psy6266 80 GVQTLSGTGALRVGAEFLHR--IL----------------------NYTTFYYSKPTWENHRLVFLNAGF--TEAREYRY 133 (218)
Q Consensus 80 ~~~t~G~~~al~~~~~~l~~--l~----------------------~gd~V~i~~P~y~~y~~~~~~~g~--~~~~~~~~ 133 (218)
.+.|.|||.|.-.++.+-+. +. ++..|++++-...+....++..|+ .+++.+|.
T Consensus 162 G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~ 241 (522)
T TIGR03799 162 GAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKT 241 (522)
T ss_pred eEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEe
Confidence 46789999987766554222 11 234688888877777777777775 13667776
Q ss_pred cCCcCccccHHHHHHHHhcC---CCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 134 WNPEKRAVDFTGMYEDLVNA---PDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 134 ~~~~~~~~d~~~~~~~l~~~---~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
. +...+|.+.+++.|++. ..+.++++....++.||. +|+++|+++++|+..| -+|.+.
T Consensus 242 d--~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVD--aA~gg~ 307 (522)
T TIGR03799 242 D--ANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVD--AAWGGA 307 (522)
T ss_pred C--CCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEE--chhhhH
Confidence 2 34678999999988642 223344444455678998 8999999999999999 777753
No 296
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=97.34 E-value=0.0051 Score=55.12 Aligned_cols=182 Identities=10% Similarity=0.075 Sum_probs=89.9
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccC--cCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEY--LPVLGLESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y--~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
..|...||+.-|.....-| ...|.|.+|.++.+++ .....+ .+..-..+|-+.+++..-+ ...+++ .
T Consensus 30 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~a~~~ql~~-~~~~~~~~~~~~~~~~la~~l~~~~p~------~~~~~v--~ 98 (420)
T TIGR00700 30 VDGNRLIDFASGIAVLNIG--HSHPRVVDAVRTQVAE-FTHTCFMVTPYEGYVALAEKLNRIAPG------SGPKKS--V 98 (420)
T ss_pred CCCCEEEECccCHHhccCC--CCCHHHHHHHHHHHHh-ccCccccccCChHHHHHHHHHHHhCCC------CCCCEE--E
Confidence 4577777876664333345 4467788776665543 111111 2222223343333332211 111344 4
Q ss_pred EeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCC-------------cceeEeccCCc-------Cccc
Q psy6266 82 QTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFT-------------EAREYRYWNPE-------KRAV 141 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~-------------~~~~~~~~~~~-------~~~~ 141 (218)
-+.+|++|...++.+-+.......|+...-+|-........+... ....+++.... ....
T Consensus 99 f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (420)
T TIGR00700 99 FFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLST 178 (420)
T ss_pred EeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhH
Confidence 667888988888876544433356777777776654322222110 01111110000 0000
Q ss_pred --cHHHHHHHHh--cCCCC-cEEEEcccCCC------CcHH--HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 142 --DFTGMYEDLV--NAPDN-SVIILHACAHN------PTAQ--QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 142 --d~~~~~~~l~--~~~~~-~~iil~~~p~N------PTG~--~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
+++.+++.+. ...+. ..+++-+-..+ |-+. +|.++|++|++++|.| |+|.++.+.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~D--EV~tg~gr~ 246 (420)
T TIGR00700 179 DGELAAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIAD--EVQTGFART 246 (420)
T ss_pred HHHHHHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEE--ecccCCccc
Confidence 2445555553 11122 22333221111 2221 7999999999999999 999998654
No 297
>PRK06541 hypothetical protein; Provisional
Probab=97.33 E-value=0.0045 Score=56.24 Aligned_cols=181 Identities=12% Similarity=0.043 Sum_probs=90.1
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
-..|...||+.-|.....-| ...|.|.+|.++.++. ..+ +......-+.+..+++.+.. ... -..+++ .-
T Consensus 48 D~dG~~ylD~~~g~~~~~lG--h~~p~v~~Av~~q~~~--~~~-~~~~~~~~~~~~~la~~l~~-~~p--~~~~~v--~f 117 (460)
T PRK06541 48 DDRGKRYLDGLAGLFVVQVG--HGRAELAEAAAKQAGT--LAF-FPLWSYAHPPAIELAERLAA-LAP--GDLNRV--FF 117 (460)
T ss_pred eCCCCEEEECCccHHhccCC--CCCHHHHHHHHHHHhh--CcC-ccccccCCHHHHHHHHHHHH-hCC--CCcCEE--EE
Confidence 35677778876664333455 4467788876665543 111 11111111222333444422 110 011454 46
Q ss_pred eccChhHHHHHHHHHHHhc--C----CCeEEecCCCchhHHHH-HHHhCCC-----------cceeEeccCCcC---ccc
Q psy6266 83 TLSGTGALRVGAEFLHRIL--N----YTTFYYSKPTWENHRLV-FLNAGFT-----------EAREYRYWNPEK---RAV 141 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~--~----gd~V~i~~P~y~~y~~~-~~~~g~~-----------~~~~~~~~~~~~---~~~ 141 (218)
+.+|++|...++.+.+... . -.+|+...=+|-..... +...|.. .+..+|....-. ++.
T Consensus 118 ~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 197 (460)
T PRK06541 118 TTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGD 197 (460)
T ss_pred cCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCC
Confidence 7888898888777544321 1 25677766666554321 1111110 011122100000 001
Q ss_pred c--------HHHHHHHHhcCCCCcEEEEcccC-CCCcHH---------HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 142 D--------FTGMYEDLVNAPDNSVIILHACA-HNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 142 d--------~~~~~~~l~~~~~~~~iil~~~p-~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
+ .+.+++.+.+..++.+..++..| ++++|. +|.++|+++++.+|.| |++.|+
T Consensus 198 ~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~D--EV~tGf 267 (460)
T PRK06541 198 DPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSD--EVICAF 267 (460)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe--chhhCC
Confidence 1 24455555432123333333345 666554 7999999999999999 999887
No 298
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=97.32 E-value=0.0029 Score=54.82 Aligned_cols=151 Identities=11% Similarity=0.031 Sum_probs=90.4
Q ss_pred cCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCC
Q psy6266 25 WVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYT 104 (218)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd 104 (218)
-+-+.+++|+.++-. .....|....=...+-+.+++. ++ + +.++-+++||+|-.+++.+. +.||+
T Consensus 11 g~~~~m~eam~~a~~--~~~~~YG~D~~~~~~e~~~ae~-~g-~---------~a~~Fv~sGT~aN~lal~~~--~~~~~ 75 (342)
T COG2008 11 GPTPEMREALAAANA--VGDDVYGEDPTTNALEQRIAEL-FG-K---------EAALFVPSGTQANQLALAAH--CQPGE 75 (342)
T ss_pred CCCHHHHHHHHhccc--cCCCCCCCCHHHHHHHHHHHHH-hC-C---------ceEEEecCccHHHHHHHHHh--cCCCC
Confidence 356778887766542 2345575554444444433332 33 1 23456778888888888776 57999
Q ss_pred eEEecCCCchhHH--HHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC----CCCcEEEEcccCCCCcHH-------
Q psy6266 105 TFYYSKPTWENHR--LVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA----PDNSVIILHACAHNPTAQ------- 171 (218)
Q Consensus 105 ~V~i~~P~y~~y~--~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~----~~~~~iil~~~p~NPTG~------- 171 (218)
+|++-.-+...-. ...+..+. ...++.-......++++.++..+... .+++.+++.+ .+|=-|.
T Consensus 76 ~vi~~~~aHi~~~E~Ga~~~~~~--~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~-~~te~GtVy~l~el 152 (342)
T COG2008 76 SVICHETAHIYTDECGAPEFFGG--GQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLEN-TATEGGTVYPLDEL 152 (342)
T ss_pred eEEEeccccceecccCcHHHHcC--CceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEee-ccCCCceecCHHHH
Confidence 9998877643311 12233321 23333333355688999999988641 2334444432 3343365
Q ss_pred -HHHHHhhcCeEEEeeCC-ceeec
Q psy6266 172 -QVAHMVDKHHVYLLRSG-RINMC 193 (218)
Q Consensus 172 -~l~~l~~~~~i~ii~D~-r~~y~ 193 (218)
+|.++|+++++.+.-|| |..+.
T Consensus 153 ~~i~~~~k~~~l~LHmDGAR~~nA 176 (342)
T COG2008 153 EAISAVCKEHGLPLHMDGARLANA 176 (342)
T ss_pred HHHHHHHHHhCCceeechHHHHHH
Confidence 78899999999999999 54443
No 299
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=97.29 E-value=0.008 Score=54.86 Aligned_cols=101 Identities=16% Similarity=0.087 Sum_probs=60.9
Q ss_pred EeccChhHHHHHHHHHHHhcCCCeEEecCC---CchhHHHHHHHhC--CCcce--eEec-cCCcCccccHHHHHHHHhcC
Q psy6266 82 QTLSGTGALRVGAEFLHRILNYTTFYYSKP---TWENHRLVFLNAG--FTEAR--EYRY-WNPEKRAVDFTGMYEDLVNA 153 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~gd~V~i~~P---~y~~y~~~~~~~g--~~~~~--~~~~-~~~~~~~~d~~~~~~~l~~~ 153 (218)
+...|+.|...++.++ +.|||+|+..+. ++.+|........ ..... .+++ ++.+...+|++.+++.+.+.
T Consensus 105 ~~~SG~~AN~av~~aL--~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~ 182 (475)
T PLN03226 105 QPLSGSPANFAVYTAL--LQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLF 182 (475)
T ss_pred CcCchHHHHHHHHHHh--CCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhc
Confidence 4466777877777777 789999998553 3444544332211 10111 1122 13345677999999988653
Q ss_pred CCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCC
Q psy6266 154 PDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 154 ~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~ 188 (218)
.++ .+++ . .++ +|. +|.++|++++.+++.|+
T Consensus 183 ~pk-lIv~-~-~S~-~s~~~D~a~i~~ia~~~ga~LlvD~ 218 (475)
T PLN03226 183 RPK-LIIA-G-ASA-YPRDWDYARMRKIADKVGALLMCDM 218 (475)
T ss_pred CCe-EEEE-e-cCc-CCCccCHHHHHHHHHHcCCEEEEEc
Confidence 222 3333 2 223 333 78899999999999994
No 300
>PLN02724 Molybdenum cofactor sulfurase
Probab=97.25 E-value=0.006 Score=59.22 Aligned_cols=164 Identities=13% Similarity=0.056 Sum_probs=90.3
Q ss_pred EEeCCCCCccCc-hHHHHHHHHHhhcC-CCCc-cCcC----CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChh
Q psy6266 16 AYRTEECKPWVL-PVVRQAEKELAADD-SLNH-EYLP----VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTG 88 (218)
Q Consensus 16 ~~~~~~~~~~~~-~~v~~a~~~~~~~~-~~~~-~Y~~----~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~ 88 (218)
+|-|..+..+.+ ..|.++........ ...+ .|.. ..=+.+.|+.+++++.. +++++.++-|.|+|+
T Consensus 36 iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga-------~~~~~~VvFtsnaT~ 108 (805)
T PLN02724 36 VYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNA-------PPSDYACVFTSGATA 108 (805)
T ss_pred EeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCC-------CccceEEEEeCChHH
Confidence 465555544434 46666655554321 1111 1111 11256778888876532 233333468899999
Q ss_pred HHHHHHHHHHHhcCCCeEEecCCCchhHHHHHH---HhCCCcceeEeccCC------cCccccH--HHHHHHHh----c-
Q psy6266 89 ALRVGAEFLHRILNYTTFYYSKPTWENHRLVFL---NAGFTEAREYRYWNP------EKRAVDF--TGMYEDLV----N- 152 (218)
Q Consensus 89 al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~---~~g~~~~~~~~~~~~------~~~~~d~--~~~~~~l~----~- 152 (218)
|+.+++..+. +.+||+|+++.--+++-....+ ..|+ +++.++.... +...++. +.+.+.++ .
T Consensus 109 alnlva~~l~-~~~gd~Iv~t~~eH~svl~~~~~a~~~G~-~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~ 186 (805)
T PLN02724 109 ALKLVGETFP-WSSESHFCYTLENHNSVLGIREYALEKGA-AAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKR 186 (805)
T ss_pred HHHHHHHHCC-CCCCCeEEEeeccccchHHHHHHHHHcCC-eEEeccchhccccccccccccccchhhhhhhhhhhhccc
Confidence 9999987653 5789999998766666554443 3477 7777665211 1111222 33443321 0
Q ss_pred --CCCCcEEEEcccCCCCcHH-----HHHHHhhcC--------eEEEeeCC
Q psy6266 153 --APDNSVIILHACAHNPTAQ-----QVAHMVDKH--------HVYLLRSG 188 (218)
Q Consensus 153 --~~~~~~iil~~~p~NPTG~-----~l~~l~~~~--------~i~ii~D~ 188 (218)
..+++.++..+--+|-||. .+..+++.+ +++++.|+
T Consensus 187 ~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDa 237 (805)
T PLN02724 187 EDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDA 237 (805)
T ss_pred cccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeeh
Confidence 0134456666678999998 232333322 36788995
No 301
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=97.24 E-value=0.0094 Score=53.59 Aligned_cols=179 Identities=13% Similarity=0.120 Sum_probs=89.1
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCcc---CcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHE---YLPVLGLESFSSAATRMLLGGDASPPLREGRAFG 80 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~---Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~ 80 (218)
..|...||+.-|.....-| ...|.|.+|.++.++. ..+. ........+|-+.+++..-+ ..+++
T Consensus 40 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~a~~~q~~~--~~~~~~~~~~~~~~~~la~~L~~~~~~-------~~~~v-- 106 (433)
T PRK08117 40 VDGKEYLDFTSGIAVANVG--HRHPKVVQAIKEQADK--LMHGPSGVIYYESILKLAEELAEITPG-------GLDCF-- 106 (433)
T ss_pred CCCCEEEECCcchhhccCC--CCCHHHHHHHHHHHHh--ccCccccccCCHHHHHHHHHHHHhCCC-------CCCEE--
Confidence 4577777777664333344 4567788887665543 1111 11223334444444443211 11333
Q ss_pred EEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcc-------------eeEeccCCcC--cc-----
Q psy6266 81 VQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEA-------------REYRYWNPEK--RA----- 140 (218)
Q Consensus 81 ~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~-------------~~~~~~~~~~--~~----- 140 (218)
.-+.+|++|...++.+.+.+..-+.|+..+-+|-........+..+.. ..+|...... .+
T Consensus 107 ~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (433)
T PRK08117 107 FFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEV 186 (433)
T ss_pred EEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhH
Confidence 467788888888877543332235677777777553321111111001 1111100000 00
Q ss_pred ---ccHHHHHHHHhcC--CCC-cEEEEcccCCC------CcHH--HHHHHhhcCeEEEeeCCceeeccCCC
Q psy6266 141 ---VDFTGMYEDLVNA--PDN-SVIILHACAHN------PTAQ--QVAHMVDKHHVYLLRSGRINMCGLTT 197 (218)
Q Consensus 141 ---~d~~~~~~~l~~~--~~~-~~iil~~~p~N------PTG~--~l~~l~~~~~i~ii~D~r~~y~~l~~ 197 (218)
.+++.+++.+++. ..+ ..+++-+-..+ |.+. +|.++|++|++.+|.| |+|.||..
T Consensus 187 ~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~D--Ev~tG~gr 255 (433)
T PRK08117 187 CFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFD--EVQTGFGR 255 (433)
T ss_pred HHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEe--cchhccCc
Confidence 1445555555431 112 22333221111 2232 8999999999999999 99998743
No 302
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.24 E-value=0.0021 Score=56.40 Aligned_cols=147 Identities=18% Similarity=0.214 Sum_probs=93.1
Q ss_pred cCchHHHHHHHHHhhcCCCCccCcC---CCC------cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHH
Q psy6266 25 WVLPVVRQAEKELAADDSLNHEYLP---VLG------LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAE 95 (218)
Q Consensus 25 ~~~~~v~~a~~~~~~~~~~~~~Y~~---~~G------~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~ 95 (218)
.+.+.|++|.-..+..+ -..+|.- ..| ++.|...-++.+|+ ... -+ ++-.+|++|-..++.
T Consensus 37 ~~S~aV~~A~gS~ltnK-YAEGyPgkRyYgGce~VD~vE~laierak~LFg-a~~-----an---VQPhSGs~AN~av~~ 106 (413)
T COG0112 37 FTSPAVMEAQGSDLTNK-YAEGYPGKRYYGGCEYVDEVEELAIERAKKLFG-AEY-----AN---VQPHSGSQANQAVYL 106 (413)
T ss_pred cCCHHHHHHHhhhhhhc-cccCCCCccccCCCeeHHHHHHHHHHHHHHHhC-CCc-----cc---cCCCCchHHHHHHHH
Confidence 46888998876554321 1112211 122 56777777888888 432 12 366778888888887
Q ss_pred HHHHhcCCCeEEecCCCchhHHHHH---HHhC--CCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcc--cCCCC
Q psy6266 96 FLHRILNYTTFYYSKPTWENHRLVF---LNAG--FTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHA--CAHNP 168 (218)
Q Consensus 96 ~l~~l~~gd~V~i~~P~y~~y~~~~---~~~g--~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~--~p~NP 168 (218)
+| +.|||+|+-.+-..+.|..-- ...| . +.+.|+. +.++..+|++.+++...+.. +++++.- .+.-|
T Consensus 107 Al--l~pGDtimgm~l~~GGHltHg~~v~~sG~~~-~~v~Y~v-d~et~~IDyD~~~k~a~e~k--PK~ii~G~SaY~r~ 180 (413)
T COG0112 107 AL--LQPGDTIMGLDLSHGGHLTHGSPVNFSGKLF-NVVSYGV-DPETGLIDYDEVEKLAKEVK--PKLIIAGGSAYSRP 180 (413)
T ss_pred HH--cCCCCeEecccCCCCCcccCCCCCCccceeE-EeEeccc-ccccCccCHHHHHHHHHHhC--CCEEEECccccccc
Confidence 77 789999999998888876311 1112 2 4555555 34567789999999887643 3444421 11111
Q ss_pred cHH-HHHHHhhcCeEEEeeC
Q psy6266 169 TAQ-QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 169 TG~-~l~~l~~~~~i~ii~D 187 (218)
--. ++.++|.+-+-|++.|
T Consensus 181 id~~~~reIad~VGA~L~~D 200 (413)
T COG0112 181 IDFKRFREIADEVGAYLMVD 200 (413)
T ss_pred cCHHHHHHHHHHhCceEEeh
Confidence 111 7889999999999999
No 303
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=97.04 E-value=0.01 Score=56.47 Aligned_cols=126 Identities=6% Similarity=0.032 Sum_probs=84.5
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcc
Q psy6266 49 PVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEA 128 (218)
Q Consensus 49 ~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~ 128 (218)
...|...=-|..+..+|+ . ++ .-++|.|+|.+..++++++ +.+||.|+++.=+.=+-...+.+.|+ +|
T Consensus 192 ~~~G~i~eAe~~AA~~fg-A-------d~-tyfvvNGTS~~n~av~~a~--~~~Gd~VLvdRN~HKSv~haLilsga-~P 259 (714)
T PRK15400 192 DHSGPHKEAEEYIARVFN-A-------DR-SYMVTNGTSTANKIVGMYS--APAGSTVLIDRNCHKSLTHLMMMSDV-TP 259 (714)
T ss_pred CCChHHHHHHHHHHHHhC-C-------Cc-EEEEeCchHHHHHHHHHHh--cCCCCEEEeecccHHHHHHHHHHcCC-eE
Confidence 345655555555566666 2 22 2469999999999988876 67999999999997776677888999 88
Q ss_pred eeEeccCCcCccc----c-----HHHHHHHHhcCCCCc---EEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCcee
Q psy6266 129 REYRYWNPEKRAV----D-----FTGMYEDLVNAPDNS---VIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRIN 191 (218)
Q Consensus 129 ~~~~~~~~~~~~~----d-----~~~~~~~l~~~~~~~---~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~ 191 (218)
++++... +..++ + .+.+++.|++.+..+ .+++.+ | +--|. +|++++.+++ |+.| ++
T Consensus 260 VYl~P~r-n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~-p-TYdG~~yd~~~I~~~~~~~~--ilvD--EA 332 (714)
T PRK15400 260 IYFRPTR-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITN-S-TYDGLLYNTDFIKKTLDVKS--IHFD--SA 332 (714)
T ss_pred EEecccc-cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEEC-C-CCccEecCHHHHHHHhCCCC--EEEE--cc
Confidence 8875321 12222 3 788999997653212 344432 2 34454 7888887776 6889 65
Q ss_pred ec
Q psy6266 192 MC 193 (218)
Q Consensus 192 y~ 193 (218)
..
T Consensus 333 wg 334 (714)
T PRK15400 333 WV 334 (714)
T ss_pred ch
Confidence 54
No 304
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=97.03 E-value=0.0037 Score=57.04 Aligned_cols=120 Identities=15% Similarity=0.133 Sum_probs=77.9
Q ss_pred cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcC------------------------------
Q psy6266 53 LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILN------------------------------ 102 (218)
Q Consensus 53 ~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~------------------------------ 102 (218)
++.+...-++.+|+ ... -+ ++-.+|+.|...++.++ +.|
T Consensus 96 ie~l~~~ra~~lf~-a~~-----an---vqp~Sg~~An~~v~~al--l~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~ 164 (493)
T PRK13580 96 VEWEAAEHAKELFG-AEH-----AY---VQPHSGADANLVAFWAI--LAHKVESPALEKLGAKTVNDLTEEDWEALRAEL 164 (493)
T ss_pred HHHHHHHHHHHHhC-CCc-----cc---ccCCCcHHHHHHHHHHH--hcccccCcchhccccccccccchhhhhhhhccC
Confidence 34555555666776 321 12 37788888888888877 545
Q ss_pred -CCeEEecCCCchhHHHH-----HHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH----H
Q psy6266 103 -YTTFYYSKPTWENHRLV-----FLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ----Q 172 (218)
Q Consensus 103 -gd~V~i~~P~y~~y~~~-----~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~----~ 172 (218)
||+|+-.++.-+.|... +..... +.+.|++. .+...+|++.+++.+... ++.+++.. .+|-++. +
T Consensus 165 ~gd~i~~l~l~~GGHlthg~~~n~~~~~~-~~~~y~vd-~~~g~iD~d~l~~~~~~~--~plvii~g-~S~~~~~~dl~~ 239 (493)
T PRK13580 165 GNQRLLGMSLDSGGHLTHGFRPNISGKMF-HQRSYGVD-PDTGLLDYDEIAALAREF--KPLILVAG-YSAYPRRVNFAK 239 (493)
T ss_pred CCCEEEeecCCCCCeeecCcccchhhhee-eeEecccC-cccCccCHHHHHHHHhhc--CCEEEEeC-ccccCCCcCHHH
Confidence 79999998887666321 111123 45556553 344578999999988653 34444433 3333444 8
Q ss_pred HHHHhhcCeEEEeeCC
Q psy6266 173 VAHMVDKHHVYLLRSG 188 (218)
Q Consensus 173 l~~l~~~~~i~ii~D~ 188 (218)
+.++|++++.+++.|+
T Consensus 240 i~eia~~~gA~L~VD~ 255 (493)
T PRK13580 240 LREIADEVGAVLMVDM 255 (493)
T ss_pred HHHHHHHcCCEEEEEC
Confidence 9999999999999994
No 305
>KOG1368|consensus
Probab=96.98 E-value=0.018 Score=49.09 Aligned_cols=167 Identities=13% Similarity=0.091 Sum_probs=102.6
Q ss_pred CchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCe
Q psy6266 26 VLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTT 105 (218)
Q Consensus 26 ~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~ 105 (218)
|.+.+++|+..+.- +..-|....-.-.|-+..|+. +| +. -..++++|.+|-+-.+. . ..-.+|-+
T Consensus 34 PTdeMr~am~eA~v---gDdVyGeD~tt~rLE~~vA~l-~G-KE--------AgLFv~SGTmgNllaIm-~-Hc~~rg~e 98 (384)
T KOG1368|consen 34 PTDEMRRAMAEASV---GDDVYGEDPTTNRLEQRVAEL-FG-KE--------AGLFVPSGTMGNLLAIM-V-HCHQRGSE 98 (384)
T ss_pred ChHHHHHHHhhccc---CcccccCCccHHHHHHHHHHH-hC-cc--------ceeeecccccccHHHHH-H-HhcCCCce
Confidence 45567777655442 223366666667787777755 44 31 23457777666543332 2 21348999
Q ss_pred EEecCCCch-hHH--HHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC-----CCCcEEEEcccCCCCcHH------
Q psy6266 106 FYYSKPTWE-NHR--LVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA-----PDNSVIILHACAHNPTAQ------ 171 (218)
Q Consensus 106 V~i~~P~y~-~y~--~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-----~~~~~iil~~~p~NPTG~------ 171 (218)
|++-+-+.- .|+ .+....|+ .+..+. .+++..++++.++++++.. -+.+.++..-+-||-||-
T Consensus 99 ii~gd~~HI~~~E~gg~s~l~gv-~~~tv~--~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle 175 (384)
T KOG1368|consen 99 IIVGDRAHIHRYEQGGISQLAGV-HVRTVK--NENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLE 175 (384)
T ss_pred EEeccchheeehhccChhhhccc-eeEeee--eCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHH
Confidence 999876522 122 23344455 455543 4556688999999999732 233555655567888883
Q ss_pred ---HHHHHhhcCeEEEeeCCceeeccCCC--CCHHHHHHHHHHH
Q psy6266 172 ---QVAHMVDKHHVYLLRSGRINMCGLTT--QNLDHVAQAIHDA 210 (218)
Q Consensus 172 ---~l~~l~~~~~i~ii~D~r~~y~~l~~--~ni~~~~~a~~~~ 210 (218)
.+.+||++|++-+-.||.-+|..-+. -.+.++|++++-+
T Consensus 176 ~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~~fDSV 219 (384)
T KOG1368|consen 176 ELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICSAFDSV 219 (384)
T ss_pred HHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHHhhhhh
Confidence 78899999999999999444432222 2577888877655
No 306
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=96.92 E-value=0.025 Score=51.25 Aligned_cols=177 Identities=16% Similarity=0.103 Sum_probs=93.5
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...+|+.-|.-...-| ...|.|.+|.++.++.......|.......+|-+.+++..-+ ..+++ +-+
T Consensus 72 ~dG~~ylD~~~g~~~~~lG--h~hp~v~~Av~~ql~~l~~~~~~~~~~~~~~lAe~L~~~~p~-------~~~~v--~f~ 140 (442)
T TIGR03372 72 TQGNEFIDCLGGFGIFNVG--HRNPNVIAAVENQLAKQPLHSQELLDPLRALLAKTLAALTPG-------KLKYS--FFC 140 (442)
T ss_pred CCCCEEEECCccHHhhhcC--CCCHHHHHHHHHHHHhCCCcccccCCHHHHHHHHHHHHhCCC-------CcCEE--EEe
Confidence 4577777776552212334 446777777666554312223455444444555555443211 11333 467
Q ss_pred ccChhHHHHHHHHHHHhc---CCCeEEecCCCchhHHHHHHHhCCCccee----EeccCCcCc---cccHHHHHHHHhcC
Q psy6266 84 LSGTGALRVGAEFLHRIL---NYTTFYYSKPTWENHRLVFLNAGFTEARE----YRYWNPEKR---AVDFTGMYEDLVNA 153 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~---~gd~V~i~~P~y~~y~~~~~~~g~~~~~~----~~~~~~~~~---~~d~~~~~~~l~~~ 153 (218)
.+|++|...++++.+... ....|+...-+|-........... ++.. .|+. +... -.|.+.+++.+++.
T Consensus 141 ~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~-~~~~~~~~~p~~-~~~~~~p~~d~~~~~~~l~~~ 218 (442)
T TIGR03372 141 NSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATA-KPAFRKPFMPLL-PGFHHVAFGDIEAMLKALNEC 218 (442)
T ss_pred CCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccC-CcccCCCCCCCC-CCCEEeCCCCHHHHHHHHHHH
Confidence 889999988888654331 235788888877765432222222 1111 1110 1000 11566666666431
Q ss_pred ---CCC-cEEEEcccC------CCCcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 154 ---PDN-SVIILHACA------HNPTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 154 ---~~~-~~iil~~~p------~NPTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
..+ ..+++-+-. .-|.|. .+.++|++|++.+|.| |+..|+
T Consensus 219 ~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~D--EV~tG~ 270 (442)
T TIGR03372 219 KKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILD--EVQTGM 270 (442)
T ss_pred hcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEe--ecccCC
Confidence 122 222322211 124444 7999999999999999 998875
No 307
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=96.91 E-value=0.0018 Score=56.03 Aligned_cols=139 Identities=13% Similarity=0.126 Sum_probs=75.1
Q ss_pred ccCcC--CCC---cHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHh--c--CCCeEEecCCCchh
Q psy6266 45 HEYLP--VLG---LESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRI--L--NYTTFYYSKPTWEN 115 (218)
Q Consensus 45 ~~Y~~--~~G---~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l--~--~gd~V~i~~P~y~~ 115 (218)
..|.. ..+ .++|.++|.++-.- .+ ....+++- +++..|++|.+..++.+|.-- + +--.|+...|+|+.
T Consensus 32 MSY~~~~~~~~f~s~eL~~~Ir~LH~~-VG-NAvt~gr~-IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~ 108 (363)
T PF04864_consen 32 MSYFSDSSNGWFISPELERQIRRLHRV-VG-NAVTDGRY-IVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSS 108 (363)
T ss_dssp -SSSS-TTSSTTS-HHHHHHHHHHHHH-H--SB--TTSE-EEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CH
T ss_pred ceeEEecCCceeccHHHHHHHHHHHHH-hc-cccccCcE-EEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccc
Confidence 45766 333 47888888776532 22 23556664 468899999999888877433 1 13578999999999
Q ss_pred HHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHHHHHHHhhcCeEEEeeCCceeeccC
Q psy6266 116 HRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQQVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 116 y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
|..+.... +...+. |..+.. .+. ....+.+.|=++.+||||.|.--..+++.-..-+|.| .+|-.=
T Consensus 109 Y~~qt~~f---~s~~y~-w~Gda~--~~~------~~~~~~~~IElVTSPNNPDG~lr~~V~~g~~~k~I~D--~AYYWP 174 (363)
T PF04864_consen 109 YPEQTDFF---DSRLYK-WAGDAS--NFK------NSDNPSPYIELVTSPNNPDGQLREAVLNGSSGKVIHD--LAYYWP 174 (363)
T ss_dssp HHHHCCCT----BTTEE-EEEECC--CGT------T-S-CCGEEEEEESS-TTT------SSTTTEEEEEEE---TT-ST
T ss_pred hHHHHHhc---cccCcc-ccccHH--hhc------cCCCCCCeEEEEeCCCCCcccccchhcCCCCcceeee--eeeecc
Confidence 99765543 233332 222211 121 1112456777778999999984344556777778899 888755
Q ss_pred CCCCH
Q psy6266 196 TTQNL 200 (218)
Q Consensus 196 ~~~ni 200 (218)
-|..|
T Consensus 175 hyTpI 179 (363)
T PF04864_consen 175 HYTPI 179 (363)
T ss_dssp TTS--
T ss_pred ccccc
Confidence 55543
No 308
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=96.90 E-value=0.039 Score=49.61 Aligned_cols=175 Identities=13% Similarity=0.028 Sum_probs=92.0
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ...|.|.+|.++.++. ..+.+.++.-..+|-+.+.+..- ..+++ .-+
T Consensus 50 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~q~~~--~~~~~~~~~~~~~la~~l~~~~p--------~~~~v--~f~ 115 (428)
T PRK12389 50 VDGNKYIDYLAAYGPIITG--HAHPHITKAITEAAEN--GVLYGTPTELEIEFAKMLKEAIP--------SLEKV--RFV 115 (428)
T ss_pred CCCCEEEEccccccccccC--CCCHHHHHHHHHHHHh--CCccCCCCHHHHHHHHHHHHhCC--------CCcEE--EEe
Confidence 4566777776554323344 3467778776665543 23323344333444444433221 12344 467
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHH-HHHHhCCCcceeE-----eccC----CcCc---cccHHHHHHHH
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRL-VFLNAGFTEAREY-----RYWN----PEKR---AVDFTGMYEDL 150 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~-~~~~~g~~~~~~~-----~~~~----~~~~---~~d~~~~~~~l 150 (218)
.+|++|...++++.+....-..|+...-+|-.... .+...|. .+... +-+. ++.. -.|.+.+++.+
T Consensus 116 ~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l 194 (428)
T PRK12389 116 NSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGS-GPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEAL 194 (428)
T ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCC-cccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHH
Confidence 88899988888865443223566666666665432 2222221 11100 0000 0000 11677888777
Q ss_pred hcCCCC-cEEEEcccCCC------CcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 151 VNAPDN-SVIILHACAHN------PTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 151 ~~~~~~-~~iil~~~p~N------PTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
.+.... ..+++-+-..+ |.|. +|.++|+++++.+|.| |+..|+
T Consensus 195 ~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~D--EV~tG~ 246 (428)
T PRK12389 195 DKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYD--EVITAF 246 (428)
T ss_pred HhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEE--cccccc
Confidence 643222 22333221111 3343 8999999999999999 998887
No 309
>PRK13578 ornithine decarboxylase; Provisional
Probab=96.86 E-value=0.016 Score=55.29 Aligned_cols=127 Identities=9% Similarity=0.059 Sum_probs=80.4
Q ss_pred CCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHH-HHHHhCCCc
Q psy6266 49 PVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRL-VFLNAGFTE 127 (218)
Q Consensus 49 ~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~-~~~~~g~~~ 127 (218)
...|...=-|..+..+|+ . ++ .-++|.|+|.+..++.+++ +.|||.|+++.=+.=+-.. .+.+.|+ +
T Consensus 171 ~~eG~i~eAq~~AA~~fg-A-------d~-tyFlvNGTS~gn~a~i~a~--~~~Gd~VLvdRN~HKSv~hgaLiLsGa-~ 238 (720)
T PRK13578 171 IHEGAAKDAQKHAAKVFN-A-------DK-TYFVLNGTSASNKVVTNAL--LTPGDLVLFDRNNHKSNHHGALIQAGA-T 238 (720)
T ss_pred CCChHHHHHHHHHHHHhC-C-------Cc-eEEEeCChhHHHHHHHHHh--cCCCCEEEeecccHHHHHHHHHHHcCC-e
Confidence 345655445555666666 2 22 2469999999999988876 6799999999999666444 3678899 8
Q ss_pred ceeEeccCCcCccc----cH-----HHHHHHHhcC-CC-------CcEEEEcccCCCCcHH-----HHHHH-hhcCeEEE
Q psy6266 128 AREYRYWNPEKRAV----DF-----TGMYEDLVNA-PD-------NSVIILHACAHNPTAQ-----QVAHM-VDKHHVYL 184 (218)
Q Consensus 128 ~~~~~~~~~~~~~~----d~-----~~~~~~l~~~-~~-------~~~iil~~~p~NPTG~-----~l~~l-~~~~~i~i 184 (218)
|+++.-.. +..++ +. +.++++|++. +. ...+++. + .+--|. +|+++ +..++ +|
T Consensus 239 PVYl~P~~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit-~-pTYdG~~ydi~~I~~~~~h~~~-~l 314 (720)
T PRK13578 239 PVYLETAR-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQ-L-GTYDGTIYNARQVVDKIGHLCD-YI 314 (720)
T ss_pred EEEeeccc-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEE-C-CCCcceeecHHHHHHHhhccCC-cE
Confidence 88864321 12322 43 4488888764 21 1233432 2 223354 67777 56677 99
Q ss_pred eeCCceeec
Q psy6266 185 LRSGRINMC 193 (218)
Q Consensus 185 i~D~r~~y~ 193 (218)
+.| |+..
T Consensus 315 lvD--EAhg 321 (720)
T PRK13578 315 LFD--SAWV 321 (720)
T ss_pred EEe--Ccch
Confidence 999 5543
No 310
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=96.86 E-value=0.037 Score=49.70 Aligned_cols=183 Identities=15% Similarity=0.130 Sum_probs=91.1
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCcc-CcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHE-YLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~-Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
..|...||+.-|.....-| ...|.|.+|.++.++.....+. +....-..+|-+.+++.... .. .. .+++ .+.
T Consensus 36 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~~lae~l~~~~~~-~~--~~-~~~~-~f~ 108 (425)
T PRK09264 36 EDGKEYIDFFAGAGALNYG--HNNPVLKQALIDYLQRDGITHGLDMHTTAKREFLETFEETILK-PR--GL-DYKV-QFT 108 (425)
T ss_pred CCCCEeeecccchhhccCC--CCCHHHHHHHHHHHHhcccccccccCcHHHHHHHHHHHHhhcC-Cc--CC-CceE-EEe
Confidence 4577778876664333445 4567777776655432111111 11122223344444443211 10 01 1233 234
Q ss_pred eccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHh-CC-----------CcceeEeccCCcCc-cccHHHHHHH
Q psy6266 83 TLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNA-GF-----------TEAREYRYWNPEKR-AVDFTGMYED 149 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~-g~-----------~~~~~~~~~~~~~~-~~d~~~~~~~ 149 (218)
+.+|++|...++++.+....-+.|+...-+|-......-.. |- .....+|+...... .-|++.+++.
T Consensus 109 ~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~ 188 (425)
T PRK09264 109 GPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKL 188 (425)
T ss_pred CCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHH
Confidence 57899999988886544422356777777776654222211 10 01122222100000 0256667777
Q ss_pred HhcCC---CC-cEEEEcccCCC-----C-cHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 150 LVNAP---DN-SVIILHACAHN-----P-TAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 150 l~~~~---~~-~~iil~~~p~N-----P-TG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
+.+.. +. ..+++=+-..+ | -+. +|.++|++|++++|.| |++.|+
T Consensus 189 l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~D--EV~tG~ 244 (425)
T PRK09264 189 LEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVD--DIQAGC 244 (425)
T ss_pred HHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEe--chhhCC
Confidence 75421 11 22333221121 2 233 8999999999999999 999876
No 311
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=96.85 E-value=0.049 Score=48.75 Aligned_cols=176 Identities=13% Similarity=0.041 Sum_probs=98.8
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcC-CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLP-VLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~-~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
.|..-||+..|-=..--| ..+|.|++|.++.+++ +. .|.. +.---+|-+.+.+..- .-|.|. .+
T Consensus 51 DGn~YIDy~~~~Gp~ilG--H~~p~V~~Av~~~l~~--G~-~fg~Pte~Ei~~Aell~~~~p--------~~e~vr--fv 115 (432)
T COG0001 51 DGNEYIDYVLGWGPLILG--HAHPAVVEAVQEQLER--GL-SFGAPTELEVELAELLIERVP--------SIEKVR--FV 115 (432)
T ss_pred CCCEeeehhccCcccccC--CCCHHHHHHHHHHHHh--cC-CCCCCCHHHHHHHHHHHHhcC--------cccEEE--Ee
Confidence 355556655552111122 4577899998887754 23 3443 3332333333333221 125554 66
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHH-HHHhCCCccee--------Eecc-CCcCcc---ccHHHHHHHH
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLV-FLNAGFTEARE--------YRYW-NPEKRA---VDFTGMYEDL 150 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~-~~~~g~~~~~~--------~~~~-~~~~~~---~d~~~~~~~l 150 (218)
..||+|...+..+-+..-.=|.|+..+=+|-.+... +..+|- .+-. +|-- ..+.-. .|++.+++.+
T Consensus 116 nSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~ags-g~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~ 194 (432)
T COG0001 116 NSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGS-GAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAF 194 (432)
T ss_pred cchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCc-CcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHH
Confidence 777888777766544333457888888888777653 333331 1110 1100 000000 1889999988
Q ss_pred hcC-CCCcEEEEcccCCC-----CcHH---HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 151 VNA-PDNSVIILHACAHN-----PTAQ---QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 151 ~~~-~~~~~iil~~~p~N-----PTG~---~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
++. .+-..+|+-+-+.| |.-. .|.++|+++++.+|.| |+..+|-..
T Consensus 195 ~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~D--EViTGFR~~ 249 (432)
T COG0001 195 EEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFD--EVITGFRVA 249 (432)
T ss_pred HHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEe--cchhhcccC
Confidence 765 23345566566677 3322 7999999999999999 777766443
No 312
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=96.75 E-value=0.017 Score=51.46 Aligned_cols=132 Identities=13% Similarity=0.112 Sum_probs=91.8
Q ss_pred CccCcC---CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHh--cCC----CeEEecCCCch
Q psy6266 44 NHEYLP---VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRI--LNY----TTFYYSKPTWE 114 (218)
Q Consensus 44 ~~~Y~~---~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l--~~g----d~V~i~~P~y~ 114 (218)
.|-|.| .+|..++...+.+|+.. -.+- +.| +++-..|.++-+..+.+++.. ..| ++|+||+-..+
T Consensus 95 iHP~~pe~~vqG~l~li~~Lq~~L~~-ITG~----Dav-sLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHG 168 (496)
T COG1003 95 IHPFQPEEQVQGYLELIYELQEWLKE-ITGM----DAV-SLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHG 168 (496)
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHHH-hcCC----cee-eccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccC
Confidence 466776 57888888888888865 3221 334 466666666666665555442 123 68999999999
Q ss_pred hHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH------HHHHHhhcCeEEEeeCC
Q psy6266 115 NHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ------QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 115 ~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~------~l~~l~~~~~i~ii~D~ 188 (218)
.-.....++|. +++.+++. +...+|++.+++.+.+ +...+++.+| |--|. +|+++..+++-.+--||
T Consensus 169 TNPASAam~G~-~VV~V~~~--~~G~VDlddLk~k~~~---~~AalMiTnP-sT~GvFE~~I~ei~~ivH~~Gg~vY~DG 241 (496)
T COG1003 169 TNPASAAMAGF-KVVVVKCD--ENGNVDLDDLRAKAED---NLAALMITNP-STLGVFEEDIREICEIVHEAGGQVYYDG 241 (496)
T ss_pred CChhhHhhcCc-eEEEEecC--CCCCccHHHHHHHhcc---ceeEEEeccC-cccccchhhHHHHHHHHHHcCCEEEecC
Confidence 99999999999 99999883 3457899999998863 3333333333 22344 67777788998999998
No 313
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=96.61 E-value=0.11 Score=48.77 Aligned_cols=87 Identities=7% Similarity=0.040 Sum_probs=60.8
Q ss_pred eEEecCCCchhHHHHHHHhCCC--cceeEeccCCcCccccHHHHHHHHhcC--CC-CcEEEEcccCCCCcHH-----HHH
Q psy6266 105 TFYYSKPTWENHRLVFLNAGFT--EAREYRYWNPEKRAVDFTGMYEDLVNA--PD-NSVIILHACAHNPTAQ-----QVA 174 (218)
Q Consensus 105 ~V~i~~P~y~~y~~~~~~~g~~--~~~~~~~~~~~~~~~d~~~~~~~l~~~--~~-~~~iil~~~p~NPTG~-----~l~ 174 (218)
.++++.-...+........|+- +++.+|. .+...+|.+.+++.|++. .. ..+.++-....-.||. +|+
T Consensus 224 ~vl~s~~aHyS~~KAa~ilGlG~~~vv~Vpv--D~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~ 301 (608)
T TIGR03811 224 KWLVPQTKHYSWLKAADIIGIGLDQVIPVPV--DSNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIV 301 (608)
T ss_pred EEEECCCccHHHHHHHHHcCCCcccEEEeec--CCCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHH
Confidence 4777777677777777778871 3677877 335689999999988753 12 2233443455566777 788
Q ss_pred HHh---hcCeE--EEeeCCceeeccC
Q psy6266 175 HMV---DKHHV--YLLRSGRINMCGL 195 (218)
Q Consensus 175 ~l~---~~~~i--~ii~D~r~~y~~l 195 (218)
++| +++++ |+..| -+|.|+
T Consensus 302 ~l~~~~~~~gl~~~lHVD--AAyGG~ 325 (608)
T TIGR03811 302 ALRNKLMKEGIYFYLHVD--AAYGGY 325 (608)
T ss_pred HHHHHHHHcCCceeEeee--ccccch
Confidence 887 66887 69999 899985
No 314
>PRK07482 hypothetical protein; Provisional
Probab=96.60 E-value=0.051 Score=49.42 Aligned_cols=181 Identities=14% Similarity=0.108 Sum_probs=92.6
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCC-cHHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLG-LESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G-~~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
-..|...||+.-|.....-| ...|.|.+|.++.++. ..+ +....+ .-+.+..+++++.. .- + -.-+++ .
T Consensus 46 D~dG~~ylD~~sg~~~~~lG--h~~p~v~~Av~~q~~~--~~~-~~~~~~~~~~~~~~lAe~L~~-~~-p-~~~~~v--~ 115 (461)
T PRK07482 46 DAQGRRYIDAFAGLYCVNVG--YGRTEVAEAIAEQAKE--LAY-YHTYVGHGTEASITLSKRIID-RA-P-AGMSKV--Y 115 (461)
T ss_pred ECCCCEEEEcccchhhhcCC--CCCHHHHHHHHHHHHh--cCc-cccccccCCHHHHHHHHHHHH-hC-C-CCcCEE--E
Confidence 45688888888776544555 4477788887766543 111 111111 12333445555532 11 0 012454 4
Q ss_pred EeccChhHHHHHHHHHHHhc-----CC-CeEEecCCCchhHHHHHHHhCCC------------cceeE--eccCC----c
Q psy6266 82 QTLSGTGALRVGAEFLHRIL-----NY-TTFYYSKPTWENHRLVFLNAGFT------------EAREY--RYWNP----E 137 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~-----~g-d~V~i~~P~y~~y~~~~~~~g~~------------~~~~~--~~~~~----~ 137 (218)
-+.+|++|...++++.+... ++ .+|+...-+|-............ .+..+ |.+.. .
T Consensus 116 f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 195 (461)
T PRK07482 116 YGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAG 195 (461)
T ss_pred EeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccC
Confidence 67889999998888654321 22 46777777776643211111110 01111 11100 0
Q ss_pred -C---c-cccHHHHHHHHhcC-CCC-cEEEEcccCCC------CcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 138 -K---R-AVDFTGMYEDLVNA-PDN-SVIILHACAHN------PTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 138 -~---~-~~d~~~~~~~l~~~-~~~-~~iil~~~p~N------PTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
. . ..+.+.+++.+.+. ... ..+++-+-..+ |.|. +|.++|++|++.+|.| |+..||
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~D--EV~tGf 266 (461)
T PRK07482 196 MSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIAD--EVVTGF 266 (461)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEe--ccccCC
Confidence 0 0 00345566666422 122 23333221111 3333 8999999999999999 999987
No 315
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=96.57 E-value=0.031 Score=53.24 Aligned_cols=124 Identities=5% Similarity=-0.044 Sum_probs=80.0
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcce
Q psy6266 50 VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAR 129 (218)
Q Consensus 50 ~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~ 129 (218)
..|...=-|..+..+|+ . ++ .-++|.|+|.+..++.+++ +.|||.|+++.=+.=+-...+.+.|+ +|+
T Consensus 193 ~~G~i~eAe~~aA~~fg-A-------d~-tyfvvNGTS~~n~av~~a~--~~~Gd~VLvdRN~HKSv~~aLilsga-~PV 260 (713)
T PRK15399 193 HTGPHLEAEEYIARTFG-A-------EQ-SYIVTNGTSTSNKIVGMYA--APAGSTLLIDRNCHKSLAHLLMMSDV-VPI 260 (713)
T ss_pred CChHHHHHHHHHHHHhC-C-------Cc-EEEEeCChHHHHHHHHHHh--cCCCCEEEeecccHHHHHHHHHHcCC-eeE
Confidence 45554444555556665 2 22 2469999999999988876 78999999999997776678889999 888
Q ss_pred eEeccCCcCcc----ccH-----HHHHHHHhcCCCC---cEEEEcccCCCCcHH-----HHHHHhhcCeEEE-eeCCcee
Q psy6266 130 EYRYWNPEKRA----VDF-----TGMYEDLVNAPDN---SVIILHACAHNPTAQ-----QVAHMVDKHHVYL-LRSGRIN 191 (218)
Q Consensus 130 ~~~~~~~~~~~----~d~-----~~~~~~l~~~~~~---~~iil~~~p~NPTG~-----~l~~l~~~~~i~i-i~D~r~~ 191 (218)
+++... +..+ ++. +.+++.|++.+.. ..+++. +| +.-|. +|++.+ ++.+ +.| ++
T Consensus 261 Yl~P~~-n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit-~p-TYdGi~yd~~~I~~~~---g~~~ilvD--EA 332 (713)
T PRK15399 261 WLKPTR-NALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVIT-NS-TYDGLLYNTDWIKQTL---DVPSIHFD--SA 332 (713)
T ss_pred Eecccc-cccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEE-CC-CCCceeeCHHHHHHHh---CCCEEEEe--cc
Confidence 874321 1222 233 8888888765321 234442 22 34465 566665 4544 699 55
Q ss_pred ec
Q psy6266 192 MC 193 (218)
Q Consensus 192 y~ 193 (218)
..
T Consensus 333 hg 334 (713)
T PRK15399 333 WV 334 (713)
T ss_pred ch
Confidence 44
No 316
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=96.56 E-value=0.068 Score=48.39 Aligned_cols=101 Identities=17% Similarity=0.066 Sum_probs=53.2
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCc--cCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNH--EYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~--~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
..|...||+.-|.....-| ...|.|.+|.++.++. .... .+.+..-..+|-+.+++..-+ ...++| .
T Consensus 39 ~dG~~ylD~~~g~~~~~lG--H~~p~v~~Ai~~ql~~-~~~~~~~~~~~~~~~~lae~L~~~~p~------~~~~~v--~ 107 (445)
T PRK08593 39 VDGKTYIDLLASASSQNVG--HAPPRVVEAIKAQADK-FIHYTPAYMYHEPLVRLAKKLCELAPG------DFEKRV--T 107 (445)
T ss_pred CCCCEEEECCccHHhhcCC--CCCHHHHHHHHHHHHh-ccCccccccCCHHHHHHHHHHHHhCCC------CCCCEE--E
Confidence 4577777875553323345 3467788776665543 1111 122232233344444433211 111344 4
Q ss_pred EeccChhHHHHHHHHHHHhcCC-CeEEecCCCchhH
Q psy6266 82 QTLSGTGALRVGAEFLHRILNY-TTFYYSKPTWENH 116 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~g-d~V~i~~P~y~~y 116 (218)
-+.+|++|...++++.+.. .| ..|+..+-+|-..
T Consensus 108 f~~SGseA~e~AiklAr~~-tgr~~ii~~~~~YHG~ 142 (445)
T PRK08593 108 FGLSGSDANDGIIKFARAY-TGRPYIISFTNAYHGS 142 (445)
T ss_pred ECCchHHHHHHHHHHHHHh-hCCCeEEEECCCcCCC
Confidence 6788899988888764433 34 4566667666554
No 317
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=96.53 E-value=0.092 Score=47.99 Aligned_cols=179 Identities=12% Similarity=0.026 Sum_probs=92.3
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ...|.|.+|.++.++. ..+...+. +....+++++.. .- +. .+++ .-+
T Consensus 96 ~dG~~yiD~~~g~g~~~lG--h~~p~v~~av~~ql~~--~~~~~~~~----~~~~~lAe~l~~-~~-p~--~~~v--~f~ 161 (474)
T PLN02482 96 VDGNEYIDYVGSWGPAIIG--HADDEVLAALAETMKK--GTSFGAPC----LLENVLAEMVID-AV-PS--VEMV--RFV 161 (474)
T ss_pred CCCCEEEEecccccccccC--CCCHHHHHHHHHHHhh--CCCCCCCC----HHHHHHHHHHHH-hC-CC--CCEE--EEe
Confidence 4577777876664323344 4467888887766643 23222233 233344555533 21 11 2454 467
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHH-HHHHhCC-Cc----c--eeEecc-CCcCc---cccHHHHHHHHh
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRL-VFLNAGF-TE----A--REYRYW-NPEKR---AVDFTGMYEDLV 151 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~-~~~~~g~-~~----~--~~~~~~-~~~~~---~~d~~~~~~~l~ 151 (218)
.+|++|...++.+-+....-+.|+...-+|-.+.. .....+. .. + ..+|.. ..+.. -.|++.+++.+.
T Consensus 162 ~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~ 241 (474)
T PLN02482 162 NSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFE 241 (474)
T ss_pred CChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHH
Confidence 88899988888765443223556666666655432 1111100 00 0 000000 00000 016777887776
Q ss_pred cCCCC-cEEEEcccCCC-----C-cHH--HHHHHhhcCeEEEeeCCceeeccCCCC
Q psy6266 152 NAPDN-SVIILHACAHN-----P-TAQ--QVAHMVDKHHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 152 ~~~~~-~~iil~~~p~N-----P-TG~--~l~~l~~~~~i~ii~D~r~~y~~l~~~ 198 (218)
+.... ..+++-+-..| | .|. .|.++|++|++.+|.| |+..|+-.+
T Consensus 242 ~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~D--EV~tGfR~g 295 (474)
T PLN02482 242 ANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFD--EVMTGFRIA 295 (474)
T ss_pred hCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe--ccccCeecC
Confidence 43222 23333222222 2 343 7999999999999999 888887333
No 318
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=96.52 E-value=0.0099 Score=51.97 Aligned_cols=108 Identities=14% Similarity=0.206 Sum_probs=58.8
Q ss_pred EeccChhHHHHHHHHHHHhcCCCeEEec-CCCchhHHHHH----------HHhCCCcceeEeccCCcCccccHHHHHHHH
Q psy6266 82 QTLSGTGALRVGAEFLHRILNYTTFYYS-KPTWENHRLVF----------LNAGFTEAREYRYWNPEKRAVDFTGMYEDL 150 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~gd~V~i~-~P~y~~y~~~~----------~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l 150 (218)
+..+||+|+.+++..+ |.|||+.+.. -.-|-.-...+ +..|. +...+++. ++..+|++.+++++
T Consensus 77 q~vSGTHAi~~~Lfg~--LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi-~Y~~v~L~--~dg~~D~~~i~~~~ 151 (403)
T PF06838_consen 77 QFVSGTHAIALALFGV--LRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGI-KYREVPLT--EDGTIDWEAIKKAL 151 (403)
T ss_dssp TS-SHHHHHHHHHHHH----TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT--EEEE--B---TTSSB-HHHHHHHH
T ss_pred cccchHHHHHHHHHhc--CCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCc-eeEEEeec--CCCCcCHHHHHHhh
Confidence 5578999999988876 7899999853 23334344333 22333 44555553 34678999999999
Q ss_pred hcCCCCcEEEEcccC---CCCcHH--HHH---HHhhc--CeEEEeeCCceeeccCCCC
Q psy6266 151 VNAPDNSVIILHACA---HNPTAQ--QVA---HMVDK--HHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 151 ~~~~~~~~iil~~~p---~NPTG~--~l~---~l~~~--~~i~ii~D~r~~y~~l~~~ 198 (218)
+. +.+++++|=|. .-|+=. +|. +++|+ .+++++.| -+|.+|+-.
T Consensus 152 ~~--~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVD--NCYGEFvE~ 205 (403)
T PF06838_consen 152 KP--NTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVD--NCYGEFVET 205 (403)
T ss_dssp HT--TEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE---TTTTTTSS
T ss_pred cc--CceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEe--CCcceeccc
Confidence 73 34466676433 111111 333 33333 68999999 999988654
No 319
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=96.50 E-value=0.072 Score=48.47 Aligned_cols=179 Identities=16% Similarity=0.122 Sum_probs=91.6
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ...|.|.+|.++.++.......|.+.....+|.+.+++..-+ ..+++ .-+
T Consensus 79 ~dG~~ylD~~~g~~~~~lG--H~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~lae~L~~~~p~-------~~~~v--~f~ 147 (459)
T PRK11522 79 TQGQEFIDCLGGFGIFNVG--HRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPG-------KLKYS--FFC 147 (459)
T ss_pred CCCCEEEECCcCHHhhhcC--CCCHHHHHHHHHHHhhCcccccccCCHHHHHHHHHHHHhCCC-------CCCEE--EEe
Confidence 4566677776553222344 446778888666554311122344443334444444433211 11344 467
Q ss_pred ccChhHHHHHHHHHHHhcC--CC-eEEecCCCchhHHHHHHHhCCCcceeEecc--CCcCc---cccHHHHHHHHhcC--
Q psy6266 84 LSGTGALRVGAEFLHRILN--YT-TFYYSKPTWENHRLVFLNAGFTEAREYRYW--NPEKR---AVDFTGMYEDLVNA-- 153 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~--gd-~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~--~~~~~---~~d~~~~~~~l~~~-- 153 (218)
.+|++|...++++.+.... |+ .|+...-+|-.................++. .+... -.|.+.+++.+++.
T Consensus 148 ~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 227 (459)
T PRK11522 148 NSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKK 227 (459)
T ss_pred CCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhc
Confidence 8899999888886544321 33 577777777665432222222011111100 00000 11566677766531
Q ss_pred -CCC-cEEEEcccC------CCCcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 154 -PDN-SVIILHACA------HNPTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 154 -~~~-~~iil~~~p------~NPTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
..+ ..+++-+-. .-|.|. .+.++|++|++.+|.| |+..|+
T Consensus 228 ~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~D--EV~tG~ 277 (459)
T PRK11522 228 TGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILD--EVQTGM 277 (459)
T ss_pred cCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEec--cceecC
Confidence 112 222322111 124454 7999999999999999 998876
No 320
>PRK05965 hypothetical protein; Provisional
Probab=96.50 E-value=0.068 Score=48.58 Aligned_cols=180 Identities=10% Similarity=0.053 Sum_probs=89.6
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCC-cHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLG-LESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G-~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
..|...||+.-|.....-| ...|.|.+|.++.++. ..+ .....+ ..+.+..+++.+.. ... -..+++ .-
T Consensus 43 ~dG~~ylD~~~g~~~~~lG--h~~p~i~~Ai~~q~~~--~~~-~~~~~~~~~~~~~~lae~L~~-~~p--~~~~~v--~f 112 (459)
T PRK05965 43 ASGHQLLDAFAGLWCVNVG--YGQESIVEAAAEQMRE--LPY-ATGYFHFGSEPAIRLAAKLAE-RAP--GSLNHV--YF 112 (459)
T ss_pred CCCCEEEECcccHHhccCC--CCCHHHHHHHHHHHHh--cCC-cccccccCCHHHHHHHHHHHh-hCC--CCcCEE--EE
Confidence 4677788876664333445 3467788776665543 121 111101 11222334444432 110 112444 46
Q ss_pred eccChhHHHHHHHHHHHhc-----CC-CeEEecCCCchhHHHHHHHh-CC-----------CcceeEeccCC--cCcccc
Q psy6266 83 TLSGTGALRVGAEFLHRIL-----NY-TTFYYSKPTWENHRLVFLNA-GF-----------TEAREYRYWNP--EKRAVD 142 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~-----~g-d~V~i~~P~y~~y~~~~~~~-g~-----------~~~~~~~~~~~--~~~~~d 142 (218)
+.+|++|...++++.+... ++ ..|+...-+|-......... +. ..+..++.... .....|
T Consensus 113 ~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (459)
T PRK05965 113 TLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDD 192 (459)
T ss_pred eCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCC
Confidence 7889999998888654331 22 46888888876653211111 11 00111111000 000112
Q ss_pred --------HHHHHHHHhcCCCCc--EEEEcccC------CCCcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 143 --------FTGMYEDLVNAPDNS--VIILHACA------HNPTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 143 --------~~~~~~~l~~~~~~~--~iil~~~p------~NPTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
++.+++.+.+..+.. .+|+-+-. .=|.+. .|.++|++|++.+|.| |+..||
T Consensus 193 ~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~D--EV~tGf 261 (459)
T PRK05965 193 PQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVAD--EVITGF 261 (459)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEe--chhccC
Confidence 245566665322122 23332211 113343 7999999999999999 999987
No 321
>PRK05367 glycine dehydrogenase; Provisional
Probab=96.42 E-value=0.03 Score=55.25 Aligned_cols=142 Identities=14% Similarity=0.124 Sum_probs=87.8
Q ss_pred eeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCC-----CC----cHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 12 EIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPV-----LG----LESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 12 l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~-----~G----~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
++.|.|. ..+|+.|.+. +++.++..+.|+|. +| +.+|++.++++. | .+..++. .
T Consensus 81 ig~G~y~-----~~~P~vi~~~---i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~Lt-G------~~~anaS--l 143 (954)
T PRK05367 81 IGQGYYG-----THTPPVILRN---ILENPAWYTAYTPYQPEISQGRLEALLNFQTMVADLT-G------LEIANAS--L 143 (954)
T ss_pred cCCCCCC-----CcCcHHHHHH---HHhCcchhhccCCCChHHHHHHHHHHHHHHHHHHHHH-C------CChhhcc--c
Confidence 5677651 2556666432 33333446778884 45 345666666654 3 3334443 6
Q ss_pred eccChhHHHHHHHHHHHhcCC--CeEEecCCCchhHHHHH----HHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCC
Q psy6266 83 TLSGTGALRVGAEFLHRILNY--TTFYYSKPTWENHRLVF----LNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDN 156 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~g--d~V~i~~P~y~~y~~~~----~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 156 (218)
+.+++.+...+++++. +.++ |+|++++-.||.+...+ +..|+ +++.++.. . |.+ . ...
T Consensus 144 ~d~aTAa~ea~~~a~~-~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~-ev~~~~~~-~-----d~~-------~-~~~ 207 (954)
T PRK05367 144 LDEATAAAEAMALAKR-VSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGI-EVVVGDAA-K-----ALD-------H-DDV 207 (954)
T ss_pred cccHHHHHHHHHHhhh-hccCCCCEEEEcCccCHHHHHHHHHHHHhCCC-EEEEecCc-c-----CCC-------c-ccE
Confidence 6777777776666653 4554 99999999999988654 44687 77777642 1 111 1 111
Q ss_pred cEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCC
Q psy6266 157 SVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 157 ~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~ 188 (218)
..+++++ .|-||. +|.+++++++++++.|.
T Consensus 208 ~~vlvq~--p~~~G~i~d~~~i~~~ah~~Gal~~vda 242 (954)
T PRK05367 208 FGVLLQY--PGTSGEVRDYTALIAAAHARGALVAVAA 242 (954)
T ss_pred EEEEEec--CCCCeeeccHHHHHHHHHHcCCEEEEEe
Confidence 2344443 467887 78899999999988883
No 322
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=96.42 E-value=0.074 Score=48.35 Aligned_cols=176 Identities=15% Similarity=0.034 Sum_probs=87.8
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCcc--CcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHE--YLPVLGLESFSSAATRMLLGGDASPPLREGRAFG 80 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~--Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~ 80 (218)
-..|...||+. |.....-| ...|.|.+|.++.++. ..+. +.++ +.+..+++++.. ... -..+++
T Consensus 68 D~dG~~ylD~~-g~~~~~lG--h~~p~v~~Ai~~ql~~--~~~~~~~~~~----~~~~~lae~L~~-~~p--~~~~~v-- 133 (459)
T PRK06082 68 DVDGKKYMDFH-GNNVHQLG--YGHPHVIEKVKEQMAK--LPFSPRRFTN----ETAIECAEKLTE-IAG--GELNRV-- 133 (459)
T ss_pred ECCCCEEEEcc-cHhhcccC--CCCHHHHHHHHHHHHh--CCCccCccCC----HHHHHHHHHHHH-hCC--CCCCEE--
Confidence 34677788876 43222345 3466777776665543 1111 1222 233344444432 110 011344
Q ss_pred EEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHH-HHHHhCCCc------------ceeEeccCCcC--c-cc---
Q psy6266 81 VQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRL-VFLNAGFTE------------AREYRYWNPEK--R-AV--- 141 (218)
Q Consensus 81 ~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~-~~~~~g~~~------------~~~~~~~~~~~--~-~~--- 141 (218)
.-+.+|++|...++.+.+.......|+...-+|-.... .+...|. . +..+|...... + ..
T Consensus 134 ~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (459)
T PRK06082 134 LFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGE-ACFRQGMGPLMAGVERIPPAVSYRGAFPDADGS 212 (459)
T ss_pred EECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCC-cccccCCCCCCCCCEEeCCCcccccccCChhHH
Confidence 47888999998888765433333678887777765432 2222221 1 11122110000 0 00
Q ss_pred ---cHHHHHHHHhcCCCCcEEEEcccCC-----CCcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 142 ---DFTGMYEDLVNAPDNSVIILHACAH-----NPTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 142 ---d~~~~~~~l~~~~~~~~iil~~~p~-----NPTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
+.+.+++.+.+......+++=+-.+ =|-|. .|.++|++|++.+|.| |+..|+
T Consensus 213 ~~~~~~~l~~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~D--EV~tG~ 274 (459)
T PRK06082 213 DVHYADYLEYVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIID--EIPNGM 274 (459)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEe--chhhCC
Confidence 1234555554321112233322111 12233 7999999999999999 998886
No 323
>PRK06062 hypothetical protein; Provisional
Probab=96.29 E-value=0.19 Score=45.59 Aligned_cols=179 Identities=15% Similarity=0.112 Sum_probs=88.9
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ...|.|.+|.++.++. ..+ +.+... -+.+..+++++.. ... -..+++ .-+
T Consensus 50 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~Ai~~q~~~--~~~-~~~~~~-~~~~~~lae~L~~-~~p--~~~~~v--~f~ 118 (451)
T PRK06062 50 YEGRRYLDFSSQLVNTNIG--HQHPKVVAAIQEQAAR--LCT-VAPAHA-NDARSEAARLIAE-RAP--GDLSKV--FFT 118 (451)
T ss_pred CCCCEEEEcccCHHhhcCC--CCCHHHHHHHHHHHHh--cCC-cCCccC-CHHHHHHHHHHHH-hCC--CCCCEE--EEc
Confidence 4577777876664333345 4456777776665543 222 111111 2223334444432 110 011454 467
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHH-HHHHhCCC----------cceeE--eccCCcCcc--cc------
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRL-VFLNAGFT----------EAREY--RYWNPEKRA--VD------ 142 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~-~~~~~g~~----------~~~~~--~~~~~~~~~--~d------ 142 (218)
.+|++|...++++.+....-.+|+...-+|-.... .+...+.. .+..+ |......+. .|
T Consensus 119 ~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 198 (451)
T PRK06062 119 NGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECER 198 (451)
T ss_pred CChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHH
Confidence 88899998888865433223567777766665432 22222210 01111 110000000 01
Q ss_pred -HHHHHHHHhcCCCCc--EEEEcccCC------CCcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 143 -FTGMYEDLVNAPDNS--VIILHACAH------NPTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 143 -~~~~~~~l~~~~~~~--~iil~~~p~------NPTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
++.+++.|+...+.. .+++-+-.. -|-|. .|.++|++|++.+|.| |+..||
T Consensus 199 ~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~D--EV~tGf 260 (451)
T PRK06062 199 ALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIAD--EVMAGF 260 (451)
T ss_pred HHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEee--ccccCC
Confidence 455666664321122 333322221 13343 7999999999999999 998886
No 324
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=96.29 E-value=0.074 Score=48.04 Aligned_cols=175 Identities=13% Similarity=-0.001 Sum_probs=91.3
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ...|.|.+|.++.++. ......++....+|-+.+.+.. . ...+++ .-+
T Consensus 50 ~dG~~yiD~~~g~~~~~lG--h~~p~v~~ai~~q~~~--~~~~~~~~~~~~~la~~L~~~~-~------~~~~~v--~f~ 116 (433)
T PRK00615 50 SLGKTFIDFCGSWGSLIHG--HSHPKICDAIQQGAER--GTSYGLTSEQEILFAEELFSYL-G------LEDHKI--RFV 116 (433)
T ss_pred CCCCEEEEcccchhccccC--CCCHHHHHHHHHHHHh--CCCCCCCCHHHHHHHHHHHHhC-C------CCcCEE--EEe
Confidence 4577788887664333445 4577888887766643 2221223333334444443332 1 111344 466
Q ss_pred ccChhHHHHHHHHHHHhcCC-CeEEecCCCchhHHH----HHHHhCCCc--c--eeE--eccCCcC---ccccHHHHHHH
Q psy6266 84 LSGTGALRVGAEFLHRILNY-TTFYYSKPTWENHRL----VFLNAGFTE--A--REY--RYWNPEK---RAVDFTGMYED 149 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~g-d~V~i~~P~y~~y~~----~~~~~g~~~--~--~~~--~~~~~~~---~~~d~~~~~~~ 149 (218)
.+|++|...++.+.+.. .| ..|+...-+|-.... .+...+- . . ..+ +...... ...|.+.+++.
T Consensus 117 ~SGsEA~e~AiklAr~~-tgr~~ii~~~~~yHG~td~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~ 194 (433)
T PRK00615 117 SSGTEATMTAVRLARGI-TGRSIIIKFLGCYHGHADTLLQGISFSET-SLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTV 194 (433)
T ss_pred CchHHHHHHHHHHHHHh-hCCCEEEEEcCccCCCCcccCcccccCCC-CcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHH
Confidence 78889888888765433 45 466666666655321 1111110 0 0 000 0000000 01166777777
Q ss_pred HhcCCCC-cEEEEcccCCC------CcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 150 LVNAPDN-SVIILHACAHN------PTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 150 l~~~~~~-~~iil~~~p~N------PTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
+.+...+ ..+++-+-..+ |.|. +|.++|++|++.+|.| |+..|+
T Consensus 195 l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~D--Ev~tG~ 247 (433)
T PRK00615 195 MNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMD--EVVTGF 247 (433)
T ss_pred HHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEE--cccccc
Confidence 7543222 23333221121 3343 8999999999999999 998887
No 325
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=96.21 E-value=0.11 Score=46.79 Aligned_cols=179 Identities=12% Similarity=0.078 Sum_probs=89.2
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCC-cHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLG-LESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G-~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
..|...||+.-|.....-| .-.|.|.+|.++.++. ..+ ....+ .-+.+..+++++.. ... ...+++ .-
T Consensus 40 ~dG~~ylD~~~g~~~~~lG--h~~p~i~~Ai~~q~~~--~~~--~~~~~~~~~~~~~la~~L~~-~~p--~~~~~v--~f 108 (428)
T PRK07986 40 ADGRRLVDGMSSWWAAIHG--YNHPQLNAAMKSQIDA--MSH--VMFGGITHPPAIELCRKLVA-MTP--QPLECV--FL 108 (428)
T ss_pred CCCCEEEEcchhHHhhcCC--CCCHHHHHHHHHHHhh--cCC--ccccccCCHHHHHHHHHHHh-hCC--CCcCEE--EE
Confidence 4566677776654333344 4467788887665543 111 11111 12233445555533 210 112344 47
Q ss_pred eccChhHHHHHHHHHHHh-----cCCCeEEecCCCchhHHHH-HHHhCCC------------cceeEeccCCc---Cc-c
Q psy6266 83 TLSGTGALRVGAEFLHRI-----LNYTTFYYSKPTWENHRLV-FLNAGFT------------EAREYRYWNPE---KR-A 140 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l-----~~gd~V~i~~P~y~~y~~~-~~~~g~~------------~~~~~~~~~~~---~~-~ 140 (218)
+.+|++|...++++.+.. ..-.+|+...-+|-..... +...+.. .+...+..... .+ .
T Consensus 109 ~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 188 (428)
T PRK07986 109 ADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDE 188 (428)
T ss_pred eCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHH
Confidence 788889888887754433 1235788888877653311 1111110 01111110000 00 1
Q ss_pred ccHHHHHHHHhcCCCC-cEEEEcc----cCC---CCcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 141 VDFTGMYEDLVNAPDN-SVIILHA----CAH---NPTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 141 ~d~~~~~~~l~~~~~~-~~iil~~----~p~---NPTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
-|.+.+++.+++.... ..+++-+ ... -|.|. +|.++|++|++.+|.| |+..|+
T Consensus 189 ~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~D--Ev~tG~ 251 (428)
T PRK07986 189 RDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIAD--EIATGF 251 (428)
T ss_pred HHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEe--ccccCC
Confidence 2455666666543222 2233311 111 13344 8999999999999999 887765
No 326
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=96.16 E-value=0.17 Score=44.99 Aligned_cols=163 Identities=12% Similarity=-0.020 Sum_probs=94.3
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhc-CCCCccCcCCCC----cHHHHHHHHHHhcCCCCCCCcCCCce
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAAD-DSLNHEYLPVLG----LESFSSAATRMLLGGDASPPLREGRA 78 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~Y~~~~G----~~~lr~aia~~~~~~~~~~~~~~~~v 78 (218)
..|..++|++--.|- | ...-+.+++|..+.+++ ..+...=--..| ..+|=+.+|++.-. ++.
T Consensus 36 ~~~~~~~nf~SNdYL---G-La~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~---------e~a 102 (388)
T COG0156 36 ADGRKVLNFCSNDYL---G-LASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGA---------EAA 102 (388)
T ss_pred cCCceeEeeeccCcc---c-ccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCC---------CcE
Confidence 346789999988773 2 44556677776666644 111111111234 35666677776532 222
Q ss_pred EEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC---CC
Q psy6266 79 FGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA---PD 155 (218)
Q Consensus 79 ~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~---~~ 155 (218)
.+-+.| =.|-..++.++ +.++|-|+.-.=...+-..-+++.++ +.+.| . ..|++.+++.|++. ..
T Consensus 103 -l~f~SG-y~AN~~~i~~l--~~~~dli~~D~lnHASiidG~rls~a-~~~~f---~----HnD~~~Le~~l~~~~~~~~ 170 (388)
T COG0156 103 -LLFSSG-FVANLGLLSAL--LKKGDLIFSDELNHASIIDGIRLSRA-EVRRF---K----HNDLDHLEALLEEARENGA 170 (388)
T ss_pred -EEEccc-chhHHHHHHHh--cCCCcEEEEechhhhhHHHHHHhCCC-cEEEe---c----CCCHHHHHHHHHhhhccCC
Confidence 223333 33333344444 45788888877775555555666666 55555 2 24778888888762 11
Q ss_pred CcEEEEcc--cCCCCcHH---HHHHHhhcCeEEEeeCCceeec
Q psy6266 156 NSVIILHA--CAHNPTAQ---QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 156 ~~~iil~~--~p~NPTG~---~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
+.++|+.- .-.+.+-+ +|.+++++|+.|++.| |+++
T Consensus 171 ~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VD--EAHa 211 (388)
T COG0156 171 RRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVD--EAHA 211 (388)
T ss_pred CceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEE--cccc
Confidence 23333321 11222222 8999999999999999 8877
No 327
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=96.14 E-value=0.19 Score=46.36 Aligned_cols=181 Identities=14% Similarity=0.143 Sum_probs=90.9
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCC-CCcHHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPV-LGLESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~-~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
-..|...||+.-|.....-| ...|.|.+|.++.+++ ..+ +... .+.-+....+++++.. .... ...+++ .
T Consensus 85 D~dG~~ylD~~sg~~~~~lG--h~hp~v~~Av~~ql~~--~~~-~~~~~~~~~~~~~~lae~L~~-~~~~-~~~~~v--~ 155 (504)
T PLN02760 85 DINGKKYLDALAGLWCTALG--GSEPRLVAAATEQLNK--LPF-YHSFWNRTTKPSLDLAKELLE-MFTA-RKMGKV--F 155 (504)
T ss_pred ECCCCEEEEcCcCHHhcccC--CCCHHHHHHHHHHHhh--ccc-eecccccCcHHHHHHHHHHHh-hcCC-CCCCEE--E
Confidence 35677888887764434455 4567788877666543 121 1111 1233444555666543 2100 111343 4
Q ss_pred EeccChhHHHHHHHHHHHhc-----CC-CeEEecCCCchhHHH-HHHHhCCCcce------------eEec---cC---C
Q psy6266 82 QTLSGTGALRVGAEFLHRIL-----NY-TTFYYSKPTWENHRL-VFLNAGFTEAR------------EYRY---WN---P 136 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~-----~g-d~V~i~~P~y~~y~~-~~~~~g~~~~~------------~~~~---~~---~ 136 (218)
-+.+|++|...++.+.+... ++ +.|+..+-+|-.... .+...|. ... ..++ |. .
T Consensus 156 f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 234 (504)
T PLN02760 156 FTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGL-PALHQKFDLPAPFVLHTDCPHYWRFHLP 234 (504)
T ss_pred EeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCC-hhhccCCCCCCCCcEEeCCCcccccCCC
Confidence 67888999888887653221 22 567777777766432 1222221 111 1111 00 0
Q ss_pred cCc-----cccHHHHHHHHhcCCCCc--EEEEcccCC------CCcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 137 EKR-----AVDFTGMYEDLVNAPDNS--VIILHACAH------NPTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 137 ~~~-----~~d~~~~~~~l~~~~~~~--~iil~~~p~------NPTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
... ....+.+++.+.+..+.. .+++=+-.. -|.|. .|.++|++|++.+|.| |+..||
T Consensus 235 ~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~D--EV~TGf 306 (504)
T PLN02760 235 GETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIAD--EVICAF 306 (504)
T ss_pred CCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEec--chhhCC
Confidence 000 001123444443221222 233222111 14444 8999999999999999 998887
No 328
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=96.09 E-value=0.24 Score=45.05 Aligned_cols=109 Identities=13% Similarity=-0.004 Sum_probs=58.5
Q ss_pred CCCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCcc--CcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceE
Q psy6266 2 YMSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHE--YLPVLGLESFSSAATRMLLGGDASPPLREGRAF 79 (218)
Q Consensus 2 ~~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~--Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~ 79 (218)
|...|...||+.-|.....-| ...|.|.+|.++.+.. ...+. +.+. +.+..+++++.. .........++
T Consensus 53 ~D~dG~~ylD~~~g~~~~~lG--H~~p~v~~Ai~~q~~~-~~~~~~~~~~~----~~~~~lAe~L~~-~~p~~~~~~~~- 123 (459)
T PRK06931 53 TDVEGNQYLDCLAGAGTLALG--HNHPDVLQSIQDVLTS-GLPLHTLDLTT----PLKDAFSEYLLS-LLPGQGKEYCL- 123 (459)
T ss_pred EeCCCCEEEEcccchhhccCC--CCCHHHHHHHHHHHhh-hccccccccCC----HHHHHHHHHHHH-hCCCccccceE-
Confidence 446788888887775444455 4566777776665532 11111 1222 334444555532 11000000122
Q ss_pred EEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHH
Q psy6266 80 GVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLV 119 (218)
Q Consensus 80 ~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~ 119 (218)
++.+.+|++|...++.+.+....-+.|+...-+|-.....
T Consensus 124 ~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~ 163 (459)
T PRK06931 124 QFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHG 163 (459)
T ss_pred EEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHH
Confidence 3456788999988888654443345677777777665533
No 329
>PRK12403 putative aminotransferase; Provisional
Probab=96.06 E-value=0.15 Score=46.42 Aligned_cols=179 Identities=12% Similarity=0.079 Sum_probs=85.7
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCC-CCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPV-LGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~-~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
..|...||+.-|.....-|+ ..|.|.+|.++.++. ..+ +... .+.-+....+++++.. .-. -..+++ +.
T Consensus 51 ~dG~~ylD~~~g~~~~~lGh--~hp~v~~A~~~q~~~--~~~-~~~~~~~~~~~~~~lae~L~~-~~p--~~~~~v--~f 120 (460)
T PRK12403 51 NDGKRYLDGMSGLWCTNLGY--GRKDLAAAAARQMEQ--LPY-YNMFFHTTHPAVIELSELLFS-LLP--GHYSHA--IY 120 (460)
T ss_pred CCCCEEEECchhHHhhcCCC--CCHHHHHHHHHHHHh--CCC-eecccccCCHHHHHHHHHHHH-hCC--CCcCEE--EE
Confidence 45777778665543334453 457788877666643 121 1111 2223334444555432 110 011444 57
Q ss_pred eccChhHHHHHHHHHHHh-----cCCCeE-EecCCCchhHH-HHHHHhCCCc-----------ceeEe--ccCCcCccc-
Q psy6266 83 TLSGTGALRVGAEFLHRI-----LNYTTF-YYSKPTWENHR-LVFLNAGFTE-----------AREYR--YWNPEKRAV- 141 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l-----~~gd~V-~i~~P~y~~y~-~~~~~~g~~~-----------~~~~~--~~~~~~~~~- 141 (218)
+.+|++|...++.+.+.. .+++.+ +...-+|-... ..+...|. . +..+| .+....+..
T Consensus 121 ~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 199 (460)
T PRK12403 121 TNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGM-KFMHEMGGLIPDVAHIDEPYWYANGGELT 199 (460)
T ss_pred eCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCC-ccccccCCCCCCCEEeCCCcccccccCCC
Confidence 888999999888876533 133444 34444554432 12222221 1 11121 100000000
Q ss_pred -------cHHHHHHHHhcCCCCc--EEEEcccC------CCCcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 142 -------DFTGMYEDLVNAPDNS--VIILHACA------HNPTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 142 -------d~~~~~~~l~~~~~~~--~iil~~~p------~NPTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
+.+.+++.+.+..+.. .+++-+-. .-|.|. .|.++|++|++.+|.| |+..|+
T Consensus 200 ~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~D--EV~tGf 268 (460)
T PRK12403 200 PAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCAD--EVIGGF 268 (460)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe--ccccCC
Confidence 1233444443221122 23332211 123344 8999999999999999 888776
No 330
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=96.05 E-value=0.31 Score=44.15 Aligned_cols=183 Identities=13% Similarity=0.061 Sum_probs=95.9
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCC-CCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDS-LNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
-..|...||+.-|.--..-| ...|.|.+|.++.++... ..++|.+..-.-+|-+.+.+..-+ . ..+. ++
T Consensus 52 DvdG~~ylDf~sgi~v~~~G--H~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~-~-----~~~~--~~ 121 (447)
T COG0160 52 DVDGNEYLDFLSGIAVLNLG--HNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPG-S-----GLKK--VF 121 (447)
T ss_pred eCCCCEEEEcccCcchhccC--CCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCc-c-----cCCe--EE
Confidence 34677778887754333455 457788887665443311 234555554444444444443322 1 1123 35
Q ss_pred EeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHH-HHHhCCC------------cceeEeccCCcC--ccc-----
Q psy6266 82 QTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLV-FLNAGFT------------EAREYRYWNPEK--RAV----- 141 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~-~~~~g~~------------~~~~~~~~~~~~--~~~----- 141 (218)
-+++|++|...++++-+..-....|+...=+|-..... +.+.|-. .++.+|+...-. ++.
T Consensus 122 f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~ 201 (447)
T COG0160 122 FGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEEC 201 (447)
T ss_pred ecCCcHHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhh
Confidence 77788899998888654433457888888777654322 1211110 133344321111 111
Q ss_pred ---cHHHHHHHHhcC--CCC-c-EEEE---cc---cCCCCcHH--HHHHHhhcCeEEEeeCCceeeccCCC
Q psy6266 142 ---DFTGMYEDLVNA--PDN-S-VIIL---HA---CAHNPTAQ--QVAHMVDKHHVYLLRSGRINMCGLTT 197 (218)
Q Consensus 142 ---d~~~~~~~l~~~--~~~-~-~iil---~~---~p~NPTG~--~l~~l~~~~~i~ii~D~r~~y~~l~~ 197 (218)
..+.++..+... .+. . .+++ |. .-.-|.|. .+.++|+||+|.+|.| |+=.|+-.
T Consensus 202 ~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~D--EVQtG~GR 270 (447)
T COG0160 202 GDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIAD--EVQTGFGR 270 (447)
T ss_pred hHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe--ccccCCCc
Confidence 122233333322 111 2 2232 11 12335555 7999999999999999 88777643
No 331
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=96.01 E-value=0.22 Score=45.52 Aligned_cols=182 Identities=12% Similarity=0.078 Sum_probs=88.9
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCC---cCCCceEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPP---LREGRAFG 80 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~---~~~~~v~~ 80 (218)
..|...||+.-|.....-| ...|.|.+|.++.++. ..+........ +-+..+++++.. .-... -.-+++
T Consensus 61 ~dG~~ylD~~~g~~~~~lG--h~~p~i~~Ai~~q~~~--l~~~~~~~~~~-~~~~~lae~L~~-~~p~~~~~~~~~~v-- 132 (472)
T PRK08742 61 HDGRRYLDAVSSWWTNLFG--HAEPRIGAAIAAQAGE--LEQVMLAGFTH-EPAVQLAEQLLA-IAPRQDGRAPLSKV-- 132 (472)
T ss_pred CCCCEEEEcCccHHhccCC--CCCHHHHHHHHHHHHh--CCCccccccCC-HHHHHHHHHHHH-hCCCcccCCCCCEE--
Confidence 4577777876664333345 3466777776655432 11111111111 223444555432 11000 012354
Q ss_pred EEeccChhHHHHHHHHHHHhc-----CC-CeEEecCCCchhHHHHHHHhCCCc------------ceeEeccCCc--Ccc
Q psy6266 81 VQTLSGTGALRVGAEFLHRIL-----NY-TTFYYSKPTWENHRLVFLNAGFTE------------AREYRYWNPE--KRA 140 (218)
Q Consensus 81 ~~t~G~~~al~~~~~~l~~l~-----~g-d~V~i~~P~y~~y~~~~~~~g~~~------------~~~~~~~~~~--~~~ 140 (218)
.-+.+|++|...++++.+... ++ .+|+...-+|-............. +..+|..... ..+
T Consensus 133 ~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~ 212 (472)
T PRK08742 133 FYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPG 212 (472)
T ss_pred EEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccC
Confidence 577888898888877654331 22 577777877766542222221100 1111110000 000
Q ss_pred --------ccHHHHHHHHhcCCCCcEEEEcccC--CC-------CcHH--HHHHHhhcCeEEEeeCCceeeccCC
Q psy6266 141 --------VDFTGMYEDLVNAPDNSVIILHACA--HN-------PTAQ--QVAHMVDKHHVYLLRSGRINMCGLT 196 (218)
Q Consensus 141 --------~d~~~~~~~l~~~~~~~~iil~~~p--~N-------PTG~--~l~~l~~~~~i~ii~D~r~~y~~l~ 196 (218)
.+.+.+++.+.+....-..++. -| ++ |.|. .+.++|++|++.+|.| |+..||-
T Consensus 213 ~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~-EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~D--EV~TGfG 284 (472)
T PRK08742 213 QSAEDYALQAADALQALFEQSPGEICALIL-EPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIAD--EIATGFG 284 (472)
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCceEEEEE-ccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEe--chhhCCC
Confidence 0245555555432122122221 22 21 3444 7999999999999999 9988873
No 332
>PRK07046 aminotransferase; Validated
Probab=95.95 E-value=0.34 Score=44.02 Aligned_cols=171 Identities=12% Similarity=0.010 Sum_probs=88.4
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+..|.-...-| ...|.|.+|.++.++. ..+...++....+|-+.+.+.. + .+++ .-+
T Consensus 72 ~DG~~yiD~~~g~g~~~lG--h~~p~i~~Av~~q~~~--~~~~~~~~~~~~~lAe~l~~~~-~--------~~~v--~F~ 136 (453)
T PRK07046 72 VDGHRYDDFCLGDTGAMFG--HSPAPVARALAEQARR--GLTTMLPSEDAAWVGEELARRF-G--------LPYW--QVA 136 (453)
T ss_pred CCCCEEEEecccccccccC--CCCHHHHHHHHHHHHh--CCCCCCCCHHHHHHHHHHHHHh-C--------CCEE--EEE
Confidence 3567778876554223344 4467888887776644 2222223333333434333322 1 2454 467
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHH-HHHH-hCCCcceeEecc-------CCcCc---cccHHHHHHHHh
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRL-VFLN-AGFTEAREYRYW-------NPEKR---AVDFTGMYEDLV 151 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~-~~~~-~g~~~~~~~~~~-------~~~~~---~~d~~~~~~~l~ 151 (218)
.+|++|...++++-+....-+.|+...=+|-.... .+.. ... ++...+.+ ..... -.|++.+++.+.
T Consensus 137 nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~ 215 (453)
T PRK07046 137 TTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDG-RPVQRPGLLGQVHDLTATTRVVEFNDLAALEAALA 215 (453)
T ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCC-CCCCCCCCCCCCccccCceEeeCCCCHHHHHHHhC
Confidence 88889888887765443334567777766666421 1111 111 11000000 00000 016788877774
Q ss_pred cCCCCcEEEEcccCCC------CcHH--HHHHHhhcCeEEEeeCCceeec
Q psy6266 152 NAPDNSVIILHACAHN------PTAQ--QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 152 ~~~~~~~iil~~~p~N------PTG~--~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
. .+-..+++-+-..| |.|. ++.++|+++++.+|.| |+..
T Consensus 216 ~-~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~D--EV~t 262 (453)
T PRK07046 216 D-GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVID--ETHT 262 (453)
T ss_pred C-CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEE--cccc
Confidence 2 12223343222222 2233 8999999999999999 8764
No 333
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=95.94 E-value=0.055 Score=53.53 Aligned_cols=142 Identities=18% Similarity=0.132 Sum_probs=86.0
Q ss_pred eeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCC-----CC----cHHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 11 CEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPV-----LG----LESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 11 ~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~-----~G----~~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
.++.|.| + ..+|+.|.++..... +..+.|+|. +| +.+|++.++++. | .+.+++.
T Consensus 107 fiG~G~y---~--~~~P~~v~~~i~~~~---~~~TaytPYqaEisQG~lqal~~~Qt~ia~Lt-G------~~~anaS-- 169 (993)
T PLN02414 107 YIGMGYY---N--THVPPVILRNILENP---GWYTQYTPYQAEIAQGRLESLLNYQTMITDLT-G------LPMSNAS-- 169 (993)
T ss_pred ccCCCCC---C--ccCCHHHHHHHHhCh---HHHhhcCCCchHHHHHHHHHHHHHHHHHHHHh-C------CChhhEe--
Confidence 3566654 1 246777766544322 234566664 34 567777787765 3 4445554
Q ss_pred EeccChhHHHHHHHHHHHhcCC--CeEEecCCCchhHHHHHHH----hCCCcceeEeccCCcCccccHHHHHHHHhcCCC
Q psy6266 82 QTLSGTGALRVGAEFLHRILNY--TTFYYSKPTWENHRLVFLN----AGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPD 155 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~g--d~V~i~~P~y~~y~~~~~~----~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 155 (218)
.+.+++.+...+++++. +.+| |+|++++-.||.+...++. .|+ +++.++.. . .+ ... ..
T Consensus 170 L~d~aTAaaea~~~a~~-~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~Gi-eV~~v~~~-~----~~------~~~--~~ 234 (993)
T PLN02414 170 LLDEGTAAAEAMAMCNN-ILKGKKKKFLIASNCHPQTIDVCQTRADGLGL-EVVVADEK-D----FD------YSS--GD 234 (993)
T ss_pred ecCChHHHHHHHHHHHh-cccCCCCEEEEcCccCHhHHHHHHHhhhhcCC-EEEEecch-h----hc------ccc--Cc
Confidence 77888888887776653 5555 7899999999998876644 476 66666541 1 11 011 01
Q ss_pred CcEEEEcccCCCCcHH-----HHHHHhhcCeEEEee
Q psy6266 156 NSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLR 186 (218)
Q Consensus 156 ~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~ 186 (218)
...++++ + -|.||. +|.++|+++++.++.
T Consensus 235 v~~vlvq-~-P~~~G~v~dv~~I~~~ah~~GaL~iV 268 (993)
T PLN02414 235 VCGVLVQ-Y-PATDGEVLDYAEFVKNAHANGVKVVM 268 (993)
T ss_pred eEEEEEe-c-CCCCeEEcCHHHHHHHHHHcCCEEEE
Confidence 1123332 1 234786 788999999887776
No 334
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=95.88 E-value=0.29 Score=43.42 Aligned_cols=163 Identities=12% Similarity=0.018 Sum_probs=98.5
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHH-HHHHhcCCCCCCCcCCCceEEEEecc
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSA-ATRMLLGGDASPPLREGRAFGVQTLS 85 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~a-ia~~~~~~~~~~~~~~~~v~~~~t~G 85 (218)
.++||++-=+.+..-|.....+.+.+|...+.+. .-...|.-..|.-.=|.. +++...+ .... ..+.++..
T Consensus 20 ~~viN~~G~v~~t~lG~s~~~~e~iea~~~~~~~-~v~Le~~l~~g~~~~R~~~~~~~~~~------~~~a-ea~~ivnn 91 (395)
T COG1921 20 RRVINAIGTVLMTNLGRSLYSPEAIEAMKEAMRA-PVELETDLKTGKRGARLTELAELLCG------LTGA-EAAAIVNN 91 (395)
T ss_pred hhhhhhhhhheeccCCCccCCHHHHHHHHHHhcc-cceeeeecccchhhHHHHHHHHHHhc------ccch-hheeeECC
Confidence 3567776645555566666777777777776654 223356555554333333 3444444 2211 12357777
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEec-----CCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEE
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYS-----KPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVII 160 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~-----~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~ii 160 (218)
.+.|+.++..++ -++.+|++. +++-++-..+++++|+ +.+.+-.. .....+.++.+|.+. .+..+.
T Consensus 92 n~aAVll~~~al---~~~~EvVis~g~lV~gg~~~v~d~~~~aG~-~l~EvG~t----n~t~~~d~~~AIne~-ta~llk 162 (395)
T COG1921 92 NAAAVLLTLNAL---AEGKEVVVSRGELVEGGAFRVPDIIRLAGA-KLVEVGTT----NRTHLKDYELAINEN-TALLLK 162 (395)
T ss_pred cHHHHHHHHhhh---ccCCeEEEEccccccCCCCChhHHHHHcCC-EEEEeccc----CcCCHHHHHHHhccC-CeeEEE
Confidence 777777766655 246676664 2577778889999999 88887442 234667777778642 112222
Q ss_pred EcccCC-CCcHH----HHHHHhhcCeEEEeeC
Q psy6266 161 LHACAH-NPTAQ----QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 161 l~~~p~-NPTG~----~l~~l~~~~~i~ii~D 187 (218)
++ +.| --||. ++.++|++|++.++.|
T Consensus 163 V~-s~~~~f~~~l~~~~l~~ia~~~~lpvivD 193 (395)
T COG1921 163 VH-SSNYGFTGMLSEEELVEIAHEKGLPVIVD 193 (395)
T ss_pred Ee-eccccccccccHHHHHHHHHHcCCCEEEe
Confidence 33 222 12232 8999999999999999
No 335
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=95.83 E-value=0.53 Score=42.88 Aligned_cols=181 Identities=13% Similarity=0.072 Sum_probs=90.1
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCcc--CcCCCCcHHHHHHHHHHhcCCCCCCCcCC-CceE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHE--YLPVLGLESFSSAATRMLLGGDASPPLRE-GRAF 79 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~--Y~~~~G~~~lr~aia~~~~~~~~~~~~~~-~~v~ 79 (218)
-..|...||+.-|.....-| ...|.|.+|.++.+++ ...+. +..+. .+..+++.+.. .-...+.. +++
T Consensus 59 D~dG~~ylD~~~g~~~~~lG--h~~p~v~~Ai~~ql~~-~~~~~~~~~~~~----~~~~la~~L~~-~~p~~~~~~~~v- 129 (464)
T PRK06938 59 DVEGRQFIDCLAGAGTLALG--HNHPVVIEAIQQVLAD-ELPLHTLDLTTP----VKDQFVQDLFA-SLPEAFAREAKI- 129 (464)
T ss_pred eCCCCEEEEccCCccccccC--CCCHHHHHHHHHHHHh-hhcccccccCCH----HHHHHHHHHHH-hCcccccccceE-
Confidence 35678888887665444455 4567788887665532 11111 12222 23334444432 11000111 233
Q ss_pred EEEeccChhHHHHHHHHHHHhcCC-CeEEecCCCchhHHHH-HHHhCCC-----------cceeEeccCCcCc-------
Q psy6266 80 GVQTLSGTGALRVGAEFLHRILNY-TTFYYSKPTWENHRLV-FLNAGFT-----------EAREYRYWNPEKR------- 139 (218)
Q Consensus 80 ~~~t~G~~~al~~~~~~l~~l~~g-d~V~i~~P~y~~y~~~-~~~~g~~-----------~~~~~~~~~~~~~------- 139 (218)
.+.+.+|++|...++++.+.. .| +.|+...-+|-..... +...+-. .+..+|+......
T Consensus 130 ~f~~~SGSEAve~AlklAr~~-tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 208 (464)
T PRK06938 130 QFCGPTGTDAVEAALKLVKTA-TGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGE 208 (464)
T ss_pred EEeCCCcHHHHHHHHHHHHHh-hCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchh
Confidence 233468899998888865433 44 5677767666654322 2211100 1112221100000
Q ss_pred ---cccHHHHHHHHhcCC----CCcEEEEcccCCC------CcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 140 ---AVDFTGMYEDLVNAP----DNSVIILHACAHN------PTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 140 ---~~d~~~~~~~l~~~~----~~~~iil~~~p~N------PTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
..+++.+++.+.+.. .-..+++=+-..+ |-|. ++.++|++|++.+|.| |+..||
T Consensus 209 ~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~D--EV~tGf 277 (464)
T PRK06938 209 AGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVD--EIQSGF 277 (464)
T ss_pred hHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEe--ccccCC
Confidence 012455666665321 1123333221111 2343 8999999999999999 999988
No 336
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=95.79 E-value=0.027 Score=49.74 Aligned_cols=125 Identities=10% Similarity=0.054 Sum_probs=71.0
Q ss_pred EEEeccChh-HHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCC-cCccccHHHHHHHHhcCCCCc
Q psy6266 80 GVQTLSGTG-ALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP-EKRAVDFTGMYEDLVNAPDNS 157 (218)
Q Consensus 80 ~~~t~G~~~-al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~~~~~l~~~~~~~ 157 (218)
+++++.+|| .+.+.+.+++.-..++.|+.+.=--=+....+..+|+ +++.++.... +....|.+.+++.+++..+..
T Consensus 77 ~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl-~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~ 155 (389)
T PF05889_consen 77 CFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGL-EPVVVENVLEGDELITDLEAIEAKIEELGADN 155 (389)
T ss_dssp EEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT--EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGG
T ss_pred eEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCC-eEEEeeccCCCCeeeccHHHHHHHHHHhCCCC
Confidence 568888888 6667777665223489988876544444456677899 9999985322 222337888888886542333
Q ss_pred EEEEc-----ccCCCCcHH-HHHHHhhcCeEEEeeCCceeeccCCCCCHHHHHHHHHHHH
Q psy6266 158 VIILH-----ACAHNPTAQ-QVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDAV 211 (218)
Q Consensus 158 ~iil~-----~~p~NPTG~-~l~~l~~~~~i~ii~D~r~~y~~l~~~ni~~~~~a~~~~~ 211 (218)
++.+. +.|++|--. +|+++|++++|..+-. -+|.=-+ .+.+..|.++.
T Consensus 156 iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvN--nAYgvQ~----~~~~~~i~~a~ 209 (389)
T PF05889_consen 156 ILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVN--NAYGVQS----SKCMHLIQQAW 209 (389)
T ss_dssp EEEEEEESSTTTTB----HHHHHHHHHHHT--EEEE--GTTTTT-----HHHHHHHHHHH
T ss_pred eEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEc--cchhhhH----HHHHHHHHHHH
Confidence 33222 355666533 8999999999998888 6774311 24455555443
No 337
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=95.79 E-value=0.099 Score=47.25 Aligned_cols=159 Identities=14% Similarity=0.109 Sum_probs=96.1
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
.|.+..|||=-. -+.-.+.+..++|+.. +.-.|..+.-.-.|.+.+++.+ | + +. ++-|
T Consensus 38 ~s~dV~IDLrSD-----TgT~apS~~m~aAM~~------GDD~Y~gdpSv~~Lee~vael~-G-~-------E~--alpt 95 (467)
T TIGR02617 38 DSEDVFIDLLTD-----SGTGAVTQSMQAAMMR------GDEAYSGSRSYYALAESVKNIF-G-Y-------QY--TIPT 95 (467)
T ss_pred CCCCeEEECccC-----CCCCCCCHHHHHHHHc------CCcccccCchHHHHHHHHHHHh-C-C-------ce--EEEC
Confidence 344555555322 2321245566655442 2345988888999999888755 4 2 11 3567
Q ss_pred ccChhHHHHHHHHHHHhc-CCCeEEecCC--------CchhHHHHHHHhCCCcceeEecc--------CCcCccccHHHH
Q psy6266 84 LSGTGALRVGAEFLHRIL-NYTTFYYSKP--------TWENHRLVFLNAGFTEAREYRYW--------NPEKRAVDFTGM 146 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~-~gd~V~i~~P--------~y~~y~~~~~~~g~~~~~~~~~~--------~~~~~~~d~~~~ 146 (218)
..+.++-.++++++ +. |||++.+..+ .|..-.......|+ .++.++.. ......+|++.+
T Consensus 96 hqGRgaE~Il~~~~--~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~-~~~~l~~~ea~~~~~~~~fkG~~dl~~l 172 (467)
T TIGR02617 96 HQGRGAEQIYIPVL--IKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGC-TARNVYTKEAFDTGVRYDFKGNFDLEGL 172 (467)
T ss_pred CCCchHHHHHHHhh--cccccccccccccccccceEEEEecchHHHHHcCc-eeecccchhhcccccCCCCCCCcCHHHH
Confidence 77788888888776 45 6888876554 13222245677787 66665321 111246799999
Q ss_pred HHHHhcCCCC--cEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCC
Q psy6266 147 YEDLVNAPDN--SVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 147 ~~~l~~~~~~--~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~ 188 (218)
++.|++..+. ..+..-- -||-.|- ++.++|++|+|.++-||
T Consensus 173 e~~I~~~g~~~i~~v~~tl-t~N~~GGqpvslenlr~V~~la~~~GIplhLDg 224 (467)
T TIGR02617 173 ERGIEEVGPNNVPYIVATI-TCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDS 224 (467)
T ss_pred HHHHhhcCCCCceeeeeeE-EEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEh
Confidence 9999753111 1111111 1354443 79999999999999999
No 338
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=95.75 E-value=0.36 Score=43.89 Aligned_cols=103 Identities=11% Similarity=0.030 Sum_probs=56.7
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCC-CCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDS-LNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
..|...||+.-|.....-| ...|.|.+|.++.++... ....|.++....+|-+.+++..- ...+++ .-
T Consensus 50 ~dG~~ylD~~~g~~~~~lG--h~~p~i~~Ai~~ql~~~~~~~~~~~~~~~~~~lae~L~~~~p-------~~~~~v--~f 118 (457)
T PRK05639 50 VDGNVFIDFLAGAAAASTG--YSHPKLVKAVQEQVALIQHSMIGYTHSERAIRVAEKLAEISP-------IENPKV--LF 118 (457)
T ss_pred CCCCEEEECCcCHHhhccC--CCCHHHHHHHHHHHHhccccccCccCCHHHHHHHHHHHhhCC-------CCcCEE--EE
Confidence 4577788887664333455 456778877666554310 11123333333444444444321 111344 46
Q ss_pred eccChhHHHHHHHHHHHhcCCCeEEecCCCchhHH
Q psy6266 83 TLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHR 117 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~ 117 (218)
+.+|++|...++++.+.......|+...-+|-...
T Consensus 119 ~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t 153 (457)
T PRK05639 119 GLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQT 153 (457)
T ss_pred eCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCcc
Confidence 77889998888876543333456777777666543
No 339
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=95.74 E-value=0.18 Score=45.40 Aligned_cols=177 Identities=11% Similarity=0.048 Sum_probs=87.7
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCC-CccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSL-NHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
..|...||+.-|.....-| ...|.|.+|.++.++.... ...+.......+|-+.+++.. . .. -+++ .-
T Consensus 42 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~-~-~~-----~~~v--~f 110 (427)
T TIGR00508 42 DDGRRLIDGMSSWWAAIHG--YNHPRLNAAAQKQIDKMSHVMFGGFTHKPAIELCQKLVKMT-P-NA-----LDCV--FL 110 (427)
T ss_pred CCCCEEEEccchHHHhcCC--CCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhC-C-CC-----CCEE--EE
Confidence 3466777775553212234 4466777776665543111 111223333444555555432 1 11 1344 47
Q ss_pred eccChhHHHHHHHHHHHhc-----CC-CeEEecCCCchhHHH-HHHHhCCCcc-------------eeEeccCCcCc---
Q psy6266 83 TLSGTGALRVGAEFLHRIL-----NY-TTFYYSKPTWENHRL-VFLNAGFTEA-------------REYRYWNPEKR--- 139 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~-----~g-d~V~i~~P~y~~y~~-~~~~~g~~~~-------------~~~~~~~~~~~--- 139 (218)
+.+|++|...++.+..... +| ..|+..+-+|-.... .+...+. .. ...+.. ...+
T Consensus 111 ~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~-~~~~~~~~~~~~~~~~~~~~p-~~~~~~~ 188 (427)
T TIGR00508 111 ADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDP-ENSMHSLYKGYLPEQIFAPAP-QNRFDEE 188 (427)
T ss_pred eCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCC-cccccccccccCCCCeEcCCC-Cccccch
Confidence 7788888887777543221 23 567777777766432 2222121 11 011110 0001
Q ss_pred --cccHHHHHHHHhcCCCCc-EEEEcccCC-------CCcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 140 --AVDFTGMYEDLVNAPDNS-VIILHACAH-------NPTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 140 --~~d~~~~~~~l~~~~~~~-~iil~~~p~-------NPTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
..|++.+++.+.+...+. .+++-+-.+ .|.+. +|.++|++|++.+|.| |+..|+
T Consensus 189 ~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~D--Ev~tG~ 254 (427)
T TIGR00508 189 WNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIAD--EIATGF 254 (427)
T ss_pred hHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEe--ccccCC
Confidence 114555666665332222 223222101 14454 8999999999999999 888775
No 340
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=95.70 E-value=0.25 Score=44.95 Aligned_cols=179 Identities=12% Similarity=0.100 Sum_probs=86.9
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCC-ccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLN-HEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
..|...||+.-|.....-| ...|.|.+|.++.++..... ..+..+....+|-+.+++.. . -..+++ .-
T Consensus 53 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~Ai~~ql~~l~~~~~~~~~~~~~~~lae~L~~~~-p------~~~~~v--~f 121 (460)
T PRK06916 53 VNGNEYYDGVSSIWLNVHG--HQVPELDEAIREQLNKIAHSTLLGLANVPSILLAEKLIEVV-P------EGLKKV--FY 121 (460)
T ss_pred CCCCEEEEcchhHHHhhcC--CCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhC-C------CCCCEE--EE
Confidence 4566677765543222234 44677777766655431001 11222322233444443322 1 011344 57
Q ss_pred eccChhHHHHHHHHHHHh-----cCC-CeEEecCCCchhHHH-HHHHhCCC-----------cceeEeccCCc--Cc---
Q psy6266 83 TLSGTGALRVGAEFLHRI-----LNY-TTFYYSKPTWENHRL-VFLNAGFT-----------EAREYRYWNPE--KR--- 139 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l-----~~g-d~V~i~~P~y~~y~~-~~~~~g~~-----------~~~~~~~~~~~--~~--- 139 (218)
+.+|++|...++.+.+.. .+| +.|+...-+|-.... .+...|-. ....+|..... ..
T Consensus 122 ~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~ 201 (460)
T PRK06916 122 SDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGND 201 (460)
T ss_pred eCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCC
Confidence 788889888887754332 133 567777777766432 22221210 01112110000 00
Q ss_pred -----cccHHHHHHHHhcCCCC-cEEEEcccCCC-------CcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 140 -----AVDFTGMYEDLVNAPDN-SVIILHACAHN-------PTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 140 -----~~d~~~~~~~l~~~~~~-~~iil~~~p~N-------PTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
..+++.+++.+++.... ..+++-+-.+. |.+. .+.++|+++++.+|.| |+..|+
T Consensus 202 ~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~D--EV~TG~ 270 (460)
T PRK06916 202 KAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITD--EVATGF 270 (460)
T ss_pred hHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEee--chhhCC
Confidence 01345556666532222 22232110011 3333 7999999999999999 998886
No 341
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=95.66 E-value=0.07 Score=46.47 Aligned_cols=181 Identities=12% Similarity=0.045 Sum_probs=90.0
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
...|...||+.-|.....-| ...|.|.+|.++.++. ..+ .....-.-+.+.++++++.. .- + -..+++ .-
T Consensus 12 d~dG~~~lD~~~~~~~~~lG--h~~p~i~~ai~~~~~~--~~~-~~~~~~~~~~~~~la~~L~~-~~-p-~~~~~v--~f 81 (339)
T PF00202_consen 12 DVDGREYLDFMSGYGSVNLG--HNHPEIAEAIAEQANK--LNY-VSFSGFTHPEAAELAEKLAE-LF-P-GGLDRV--FF 81 (339)
T ss_dssp ETTSEEEEESSHHHHTTTT---BT-HHHHHHHHHHHHH--CSS-CSTTTSEEHHHHHHHHHHHH-HS-S-TTEEEE--EE
T ss_pred ECCCCEEEECCCCccceecC--CCccccchhHHHHhhh--ccc-ccccceeccchhhhhhhhhh-cc-c-ccccee--ee
Confidence 35688889987665434455 4567888887776643 222 11122333445556666543 11 0 012343 47
Q ss_pred eccChhHHHHHHHHHH------HhcCCCeEEecCCCchhHHHHHHHhCCC------------cceeEeccCCcC---ccc
Q psy6266 83 TLSGTGALRVGAEFLH------RILNYTTFYYSKPTWENHRLVFLNAGFT------------EAREYRYWNPEK---RAV 141 (218)
Q Consensus 83 t~G~~~al~~~~~~l~------~l~~gd~V~i~~P~y~~y~~~~~~~g~~------------~~~~~~~~~~~~---~~~ 141 (218)
+.+|++|...++.+.. ....-..|+...-+|............. .+..+|+..... ..-
T Consensus 82 ~~sGseAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 161 (339)
T PF00202_consen 82 ANSGSEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQA 161 (339)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHH
T ss_pred ccCchHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHH
Confidence 7888999888887654 2112467777777777654322222221 112223211000 000
Q ss_pred cHHHHHHHHhcCCCC--cEEEEcccCCC------CcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 142 DFTGMYEDLVNAPDN--SVIILHACAHN------PTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 142 d~~~~~~~l~~~~~~--~~iil~~~p~N------PTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
....+.+.+.+.... ..+|+-+-..+ |.+. .|.++|++|++.+|.| |++.|+
T Consensus 162 ~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~D--EV~tG~ 223 (339)
T PF00202_consen 162 CLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIAD--EVQTGF 223 (339)
T ss_dssp HHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEE--ETTTTT
T ss_pred HHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecc--cccccc
Confidence 011122222211112 23333222111 2222 7999999999999999 999987
No 342
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=95.62 E-value=0.47 Score=42.93 Aligned_cols=105 Identities=16% Similarity=-0.019 Sum_probs=55.4
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ...|.|.+|.++.++. ..+....... -+....+++++.. .... -..+++ .-+
T Consensus 51 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~Ai~~ql~~--~~~~~~~~~~-~~~~~~lAe~L~~-~~p~-~~~~~v--~f~ 121 (441)
T PRK05769 51 VDGNVYLDFNAGIAVTNVG--HAHPKVVKAVKEQAEK--FLHYSLTDFY-YEPAVELAERLVE-IAPG-GFEKKV--FFT 121 (441)
T ss_pred CCCCEEEECCCchhhcccC--CCCHHHHHHHHHHHHh--ccCccCcccC-CHHHHHHHHHHHH-hCCC-CCCCEE--EEC
Confidence 4677788887775444455 4467788776665543 1221111001 1223344555432 1100 011344 477
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHH
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHR 117 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~ 117 (218)
.+|++|...++++.+.....+.|+...-+|-...
T Consensus 122 ~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t 155 (441)
T PRK05769 122 NSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRT 155 (441)
T ss_pred CchHHHHHHHHHHHHHHhCCCeEEEECCCcCCcc
Confidence 8889998888875543323356777676666544
No 343
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=95.61 E-value=0.28 Score=44.23 Aligned_cols=174 Identities=10% Similarity=0.015 Sum_probs=86.9
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ...|.|.+|.++.++. ..+...+.....+|-+.+++..-+ .+++ .-+
T Consensus 45 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~Ai~~q~~~--~~~~~~~~~~~~~la~~l~~~~p~--------~~~v--~f~ 110 (431)
T PRK06209 45 VDGNEYIEYGMGLRAVGLG--HAYPPVVEAVREALQD--GCNFTRPSAIELDAAESFLELIDG--------ADMV--KFC 110 (431)
T ss_pred CCCCEEEEccccccchhcC--CCCHHHHHHHHHHHHh--CcCCCCCCHHHHHHHHHHHHhCCc--------cceE--EEe
Confidence 4577778887664333455 4467788887766643 222122222222344444443211 1344 467
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEE-ec-CCCchhHHHHHHHhCCCccee--Ee--ccC-CcCc-cccHHHHHHHHhcCCC
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFY-YS-KPTWENHRLVFLNAGFTEARE--YR--YWN-PEKR-AVDFTGMYEDLVNAPD 155 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~-i~-~P~y~~y~~~~~~~g~~~~~~--~~--~~~-~~~~-~~d~~~~~~~l~~~~~ 155 (218)
.+|++|...++++-+.. .|+..+ .. .=+|..+... ..|. .+.. .+ ... ...+ ..|++.+++.+++...
T Consensus 111 ~sGseA~e~AlklAr~~-tgr~~i~~~~~~~~h~~~~~--~~g~-~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 186 (431)
T PRK06209 111 KNGSDATSAAVRLARAY-TGRDLVARCADHPFFSTDDW--FIGT-TPMSAGIPASVSALTVTFRYNDIASLEALFEDHPG 186 (431)
T ss_pred cCHHHHHHHHHHHHHHH-hCCCeEEEeccCcccccccc--cccc-CCCCCCCChhHhccccccCCCCHHHHHHHHHhCCC
Confidence 88889988888764433 465443 32 1111110000 0111 1100 00 000 0000 1267888887764322
Q ss_pred C-cEEEEcccCC-CC-cHH--HHHHHhhcCeEEEeeCCceeeccCCC
Q psy6266 156 N-SVIILHACAH-NP-TAQ--QVAHMVDKHHVYLLRSGRINMCGLTT 197 (218)
Q Consensus 156 ~-~~iil~~~p~-NP-TG~--~l~~l~~~~~i~ii~D~r~~y~~l~~ 197 (218)
. ..+++-+-.. .| .+. +|.++|++|++.+|.| |+..|+-.
T Consensus 187 ~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~D--Ev~tG~~~ 231 (431)
T PRK06209 187 RIACVILEPATADEPQDGFLHEVRRLCHENGALFILD--EMITGFRW 231 (431)
T ss_pred CEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEE--cccccCCc
Confidence 2 2333322222 23 333 8999999999999999 88777743
No 344
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=95.59 E-value=0.21 Score=44.96 Aligned_cols=101 Identities=9% Similarity=0.052 Sum_probs=54.0
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCcc---CcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHE---YLPVLGLESFSSAATRMLLGGDASPPLREGRAF 79 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~---Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~ 79 (218)
-..|...||+.-|.....-| ...|.|.+|.++.++. ..+. +..+.-..+|-+.+++..-. ..+++
T Consensus 36 D~dG~~ylD~~~g~~~~~lG--h~~p~i~~ai~~q~~~--~~~~~~~~~~~~~~~~lae~L~~~~p~-------~~~~v- 103 (422)
T PRK05630 36 LEDGSTVIDAMSSWWSAAHG--HGHPRLKAAAHKQIDT--MSHVMFGGLTHEPAIKLTRKLLNLTDN-------GLDHV- 103 (422)
T ss_pred ECCCCEEEEcchhHHHhcCC--CCCHHHHHHHHHHHHh--CCCcccCCcCCHHHHHHHHHHHhhCCC-------CcCEE-
Confidence 35677778876664333445 4467778776665543 1211 11222223444444433210 11454
Q ss_pred EEEeccChhHHHHHHHHHHHhc-----CC-CeEEecCCCchhH
Q psy6266 80 GVQTLSGTGALRVGAEFLHRIL-----NY-TTFYYSKPTWENH 116 (218)
Q Consensus 80 ~~~t~G~~~al~~~~~~l~~l~-----~g-d~V~i~~P~y~~y 116 (218)
.-+.+|++|...++++.+... ++ .+|+...-+|...
T Consensus 104 -~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~ 145 (422)
T PRK05630 104 -FYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGD 145 (422)
T ss_pred -EEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCc
Confidence 477788888887777543331 23 4677777777663
No 345
>PRK07678 aminotransferase; Validated
Probab=95.56 E-value=0.44 Score=43.20 Aligned_cols=178 Identities=12% Similarity=0.062 Sum_probs=85.2
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ...|.|.+|.++.++. ..+ +....+.+. ...+++.+.. .. + ..+++ .-+
T Consensus 44 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~q~~~--~~~-~~~~~~~~~-~~~lae~l~~-~~-~--~~~~v--~f~ 111 (451)
T PRK07678 44 IQGNRYLDGMSGLWCVNVG--YGRKELAEAAYEQLKT--LSY-FPLTQSHEP-AIKLAEKLNE-WL-G--GEYVI--FFS 111 (451)
T ss_pred CCCCEEEEccccHHhhcCC--CCCHHHHHHHHHHHHh--cCc-cccccCCHH-HHHHHHHHHH-hC-C--CCCEE--EEe
Confidence 4566777776554333345 4467777776665543 111 111122222 2334444432 11 0 11343 477
Q ss_pred ccChhHHHHHHHHHHHhc-----CC-CeEEecCCCchhHHHHHHHhCCCc------------ceeEeccCCcC--cc---
Q psy6266 84 LSGTGALRVGAEFLHRIL-----NY-TTFYYSKPTWENHRLVFLNAGFTE------------AREYRYWNPEK--RA--- 140 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~-----~g-d~V~i~~P~y~~y~~~~~~~g~~~------------~~~~~~~~~~~--~~--- 140 (218)
.+|++|...++++.+... +| .+|+...-+|-............. +..++...... ++
T Consensus 112 ~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (451)
T PRK07678 112 NSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESE 191 (451)
T ss_pred CCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCCh
Confidence 888998888877644331 23 467777777666432222111101 11111100000 00
Q ss_pred --ccH---HHHHHHHhcC-CCC-cEEEEcccCCC------CcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 141 --VDF---TGMYEDLVNA-PDN-SVIILHACAHN------PTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 141 --~d~---~~~~~~l~~~-~~~-~~iil~~~p~N------PTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
.+. +.+++.+... .+. ..+|+-+-..+ |.|. ++.++|++|++.+|.| |+..||
T Consensus 192 ~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~D--EV~tGf 259 (451)
T PRK07678 192 DIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISD--EVICGF 259 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEe--ehhhcC
Confidence 011 1234444321 122 22333221111 3343 8999999999999999 999887
No 346
>KOG2862|consensus
Probab=95.56 E-value=0.19 Score=43.30 Aligned_cols=100 Identities=17% Similarity=0.160 Sum_probs=68.5
Q ss_pred EeccChhHHHHHHHHHHHhcCCCeEEecCC-CchhHH-HHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEE
Q psy6266 82 QTLSGTGALRVGAEFLHRILNYTTFYYSKP-TWENHR-LVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVI 159 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~gd~V~i~~P-~y~~y~-~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i 159 (218)
+...|+.|...++- ..+.|||.|++..- .|+... .+.+..|+ ++..++. .-......+.+.+.|.+.+++.+.
T Consensus 73 isgsGh~g~E~al~--N~lePgd~vLv~~~G~wg~ra~D~~~r~ga-~V~~v~~--~~G~~~~le~i~~~lsqh~p~~vf 147 (385)
T KOG2862|consen 73 ISGSGHSGWEAALV--NLLEPGDNVLVVSTGTWGQRAADCARRYGA-EVDVVEA--DIGQAVPLEEITEKLSQHKPKAVF 147 (385)
T ss_pred EecCCcchHHHHHH--hhcCCCCeEEEEEechHHHHHHHHHHhhCc-eeeEEec--CcccCccHHHHHHHHHhcCCceEE
Confidence 33345556666543 23679999988754 566543 47788899 8888854 224567899999999887666555
Q ss_pred EEcccCCCCcHH------HHHHHhhcCeEEEeeCC
Q psy6266 160 ILHACAHNPTAQ------QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 160 il~~~p~NPTG~------~l~~l~~~~~i~ii~D~ 188 (218)
+.++ -.-||. ...++|++|+.+++.|+
T Consensus 148 v~hg--dsSTgV~q~~~~~~g~lc~k~~~lllVD~ 180 (385)
T KOG2862|consen 148 VTHG--DSSTGVLQDLLAISGELCHKHEALLLVDT 180 (385)
T ss_pred EEec--CccccccchHHHHHHHHhhcCCeEEEEec
Confidence 5543 334565 35688999999999994
No 347
>PRK07480 putative aminotransferase; Validated
Probab=95.52 E-value=0.32 Score=44.20 Aligned_cols=22 Identities=18% Similarity=0.535 Sum_probs=20.7
Q ss_pred HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 172 QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
.|.++|++|++.+|.| |+..||
T Consensus 244 ~lr~lc~~~g~llI~D--EV~tGf 265 (456)
T PRK07480 244 EIQRICRKYDILLVAD--EVICGF 265 (456)
T ss_pred HHHHHHHHcCCEEEEe--chhhCC
Confidence 7999999999999999 999887
No 348
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=95.51 E-value=0.34 Score=43.93 Aligned_cols=180 Identities=12% Similarity=0.024 Sum_probs=86.3
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ...|.|.+|.++.++. ..+........+. +..+++++.. ... ...++| .-+
T Consensus 46 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~ql~~--l~~~~~~~~~~~~-~~~la~~L~~-~~p--~~~~~v--~f~ 115 (445)
T PRK09221 46 ADGRKILDGTAGLWCCNAG--HGRPEIVEAVARQAAT--LDYAPAFQMGHPL-AFELAERLAE-LAP--GGLDHV--FFT 115 (445)
T ss_pred CCCCEEEEccccHhhccCC--CCCHHHHHHHHHHHHh--ccCccccccCCHH-HHHHHHHHHH-hCC--CCCCEE--EEe
Confidence 4577778876664333445 4567777776665533 1111111112222 2234444432 110 012454 467
Q ss_pred ccChhHHHHHHHHHHHhc-----CC-CeEEecCCCchhHHHHHHHhCCC------------cceeEeccC-Cc--Cccc-
Q psy6266 84 LSGTGALRVGAEFLHRIL-----NY-TTFYYSKPTWENHRLVFLNAGFT------------EAREYRYWN-PE--KRAV- 141 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~-----~g-d~V~i~~P~y~~y~~~~~~~g~~------------~~~~~~~~~-~~--~~~~- 141 (218)
.+|++|...++++.+... ++ .+|+...-+|-......-.+... .+..+|... .. .+..
T Consensus 116 ~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (445)
T PRK09221 116 NSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKG 195 (445)
T ss_pred CCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCC
Confidence 888898888777544331 12 46777777776543211111110 111122100 00 0000
Q ss_pred -------cHHHHHHHHhcCCCCc--EEEEcccC------CCCcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 142 -------DFTGMYEDLVNAPDNS--VIILHACA------HNPTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 142 -------d~~~~~~~l~~~~~~~--~iil~~~p------~NPTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
..+.+++.++...... .+++-+-. .-|.|. +|.++|++|++.+|.| |+..|+
T Consensus 196 ~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~D--EV~tG~ 264 (445)
T PRK09221 196 QPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFD--EVITGF 264 (445)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEe--ehhhCC
Confidence 1234455554321122 23332211 123444 8999999999999999 998876
No 349
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=95.28 E-value=0.36 Score=43.84 Aligned_cols=179 Identities=9% Similarity=0.008 Sum_probs=87.2
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCcc-CcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHE-YLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~-Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
..|...||+.-|.....-| ...|.|.+|.++.+++...... +.++. .+..+++++.. ... ..-+++ .-
T Consensus 51 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~Ai~~ql~~~~~~~~~~~~~~----~~~~lAe~L~~-~~p--~~~~~v--~f 119 (453)
T PRK06943 51 RDGRRYLDAISSWWVNLFG--HANPRINAALKDQLDTLEHAMLAGCTHE----PAIELAERLAA-LTG--GTLGHA--FF 119 (453)
T ss_pred CCCCEEEEcchHHHHhcCC--CCCHHHHHHHHHHHHhcCCccccccCCH----HHHHHHHHHHH-hCC--CCCCEE--EE
Confidence 4567777776553323345 4567777776665543110111 12222 23334444432 110 011344 46
Q ss_pred eccChhHHHHHHHHHHHh-----cCC-CeEEecCCCchhHHH-HHHHhCCC-----------cceeEeccCCcC--cc--
Q psy6266 83 TLSGTGALRVGAEFLHRI-----LNY-TTFYYSKPTWENHRL-VFLNAGFT-----------EAREYRYWNPEK--RA-- 140 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l-----~~g-d~V~i~~P~y~~y~~-~~~~~g~~-----------~~~~~~~~~~~~--~~-- 140 (218)
+.+|++|...++++.... .+| .+|+...-+|-.... .+...|-. .+..++...... ..
T Consensus 120 ~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 199 (453)
T PRK06943 120 ASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGET 199 (453)
T ss_pred eCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCC
Confidence 788889888887754221 123 567777777766431 11111110 011122110000 00
Q ss_pred ------ccHHHHHHHHhcCCCC-cEEEEcccCCC-------CcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 141 ------VDFTGMYEDLVNAPDN-SVIILHACAHN-------PTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 141 ------~d~~~~~~~l~~~~~~-~~iil~~~p~N-------PTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
-+++.+++.+.+.... ..+++-+-.+. |.|. .+.++|++|++.+|.| |+..|+
T Consensus 200 ~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~D--EV~TG~ 268 (453)
T PRK06943 200 AADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIAD--EIAVGC 268 (453)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEee--chhhCC
Confidence 1235556666432222 22232210022 3343 7999999999999999 999887
No 350
>PRK06917 hypothetical protein; Provisional
Probab=95.26 E-value=0.73 Score=41.79 Aligned_cols=179 Identities=11% Similarity=0.034 Sum_probs=88.0
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ...|.|.+|.++.++. ..+.+...... +.+..+++++.. .. + -..+++ .-+
T Consensus 28 ~dG~~ylD~~~g~~~~~lG--h~hp~v~~Ai~~ql~~--~~~~~~~~~~~-~~~~~lae~L~~-~~-p-~~~~~v--~f~ 97 (447)
T PRK06917 28 QNGNKYFDGSSGAVTAGIG--HGVKEIADAIKEQAEE--VSFVYRSQFTS-EPAEKLAKKLSD-LS-P-GDLNWS--FFV 97 (447)
T ss_pred CCCCEEEECchhHHhccCC--CCCHHHHHHHHHHHhh--CcCccccccCC-HHHHHHHHHHHH-hC-C-CCCCEE--EEe
Confidence 4577777876554323345 4477788887665543 22222111111 233344444432 11 0 011343 467
Q ss_pred ccChhHHHHHHHHHHHhc-----CC-CeEEecCCCchhHHHH-HHHhCCCcc------------eeEeccCCcCc--c--
Q psy6266 84 LSGTGALRVGAEFLHRIL-----NY-TTFYYSKPTWENHRLV-FLNAGFTEA------------REYRYWNPEKR--A-- 140 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~-----~g-d~V~i~~P~y~~y~~~-~~~~g~~~~------------~~~~~~~~~~~--~-- 140 (218)
.+|++|...++++..... +| +.|+...-+|-..... +...+. .. ..++....... .
T Consensus 98 ~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 176 (447)
T PRK06917 98 NSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGH-PLRRQRFVSLLEDYPTISAPYCYRCPVQKV 176 (447)
T ss_pred CChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCC-ccccccCCCCCCCCeEeCCCcccccccCCC
Confidence 788888888777543221 33 5677777777664432 222221 10 11110000000 0
Q ss_pred ------ccHHHHHHHHhcCCCC--cEEEEcccCCC-------CcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 141 ------VDFTGMYEDLVNAPDN--SVIILHACAHN-------PTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 141 ------~d~~~~~~~l~~~~~~--~~iil~~~p~N-------PTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
-+.+.+++.+.+.... ..+++=+-..| |-+. .|.++|++|++.+|.| |+..|+
T Consensus 177 ~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~D--Ev~tGf 246 (447)
T PRK06917 177 YPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIAD--EVMTGL 246 (447)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEe--chhhCc
Confidence 0234455555432212 23333221111 3333 7999999999999999 998876
No 351
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=95.26 E-value=0.85 Score=41.62 Aligned_cols=179 Identities=13% Similarity=0.083 Sum_probs=85.8
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ...|.|.+|.++.++. ..+...... ..+.+..+++++.. .. + ...+++ .-+
T Consensus 44 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~Ai~~ql~~--l~~~~~~~~-~~~~~~~lae~L~~-~~-p-~~~~~v--~f~ 113 (466)
T PRK07030 44 FEGKRYLDAVSSWWVNVFG--HANPRINQRIKDQVDQ--LEHVILAGF-SHEPVIELSERLVK-IT-P-PGLSRC--FYA 113 (466)
T ss_pred CCCCEEEEcchhHHhhcCC--CCCHHHHHHHHHHHHh--cCCcccccc-CCHHHHHHHHHHHH-hC-C-CCcCEE--EEe
Confidence 4566667775553222334 3456777776665543 111111111 11233334444422 11 0 112344 467
Q ss_pred ccChhHHHHHHHHHHHh-----cCC-CeEEecCCCchhHHHHHHHhCCCc------------ceeEeccCCc--Ccc---
Q psy6266 84 LSGTGALRVGAEFLHRI-----LNY-TTFYYSKPTWENHRLVFLNAGFTE------------AREYRYWNPE--KRA--- 140 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l-----~~g-d~V~i~~P~y~~y~~~~~~~g~~~------------~~~~~~~~~~--~~~--- 140 (218)
.+|++|...++++.+.. .+| .+|+...-+|-.........+... +..+|..... ..+
T Consensus 114 ~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~ 193 (466)
T PRK07030 114 DNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSW 193 (466)
T ss_pred CCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCH
Confidence 88889888887754332 123 467777777765432222221101 1112110000 000
Q ss_pred -----ccHHHHHHHHhcCCCCcEEEEcccC---------CCCcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 141 -----VDFTGMYEDLVNAPDNSVIILHACA---------HNPTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 141 -----~d~~~~~~~l~~~~~~~~iil~~~p---------~NPTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
-+++.+++.+.+....-..++. -| .-|.|. .|.++|++|++.+|.| |+..|+
T Consensus 194 ~~~~~~~l~~le~~~~~~~~~iAAvi~-EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~D--EV~TGf 261 (466)
T PRK07030 194 EEHSRRMFAHMEQTLAEHHDEIAAVIV-EPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHD--EIAVGF 261 (466)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEE-ecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEe--ehhhCc
Confidence 0234455556432222122221 22 123344 7999999999999999 998887
No 352
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=95.22 E-value=0.13 Score=45.41 Aligned_cols=143 Identities=13% Similarity=0.023 Sum_probs=70.8
Q ss_pred ccCchH-HHHHHHHHhhcCCCCccCcC-CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhc
Q psy6266 24 PWVLPV-VRQAEKELAADDSLNHEYLP-VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRIL 101 (218)
Q Consensus 24 ~~~~~~-v~~a~~~~~~~~~~~~~Y~~-~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~ 101 (218)
..+++. |.+|+.+-... ..|+-.. ..=+.+.|+.+++++ + . -++++|. +.+.++|+++..++..+ +.
T Consensus 21 ~~~~~~~v~~a~~~~~~~--~~hr~~~f~~~~~~~r~~l~~l~-~-~----~~~~~v~-~~~gs~T~~~~~~~~~l--~~ 89 (378)
T PRK03080 21 CKKRPGWQLEALADALLG--RSHRQKPVKALLKRVIEGTRELL-S-L----PEGYEVG-IVPGSDTGAWEMALWSL--LG 89 (378)
T ss_pred cCCChHHHHHHHHhhhcc--cCcCCHHHHHHHHHHHHHHHHHh-C-C----CCCceEE-EECCchHHHHHHHHHhc--CC
Confidence 344555 88887643311 1232111 112344555555443 3 1 1223442 33448899999988766 55
Q ss_pred C-CCeEEecCCCchhHHHH-H-HHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH--HHHHH
Q psy6266 102 N-YTTFYYSKPTWENHRLV-F-LNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ--QVAHM 176 (218)
Q Consensus 102 ~-gd~V~i~~P~y~~y~~~-~-~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~--~l~~l 176 (218)
+ ++.|+. +=.|+..... + +..|+.+++.++. +....+|++. ++. .+.+.+ ....|.||. .+.++
T Consensus 90 ~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~--~~g~~~d~~~----i~~--~~~V~~--~h~~t~tG~~~pi~~I 158 (378)
T PRK03080 90 ARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEA--DYGSLPDLSA----VDF--DRDVVF--TWNGTTTGVRVPVARW 158 (378)
T ss_pred CCcceEEE-eCHHHHHHHHHHHhhcCCCCceEecc--CCCCCCCHhh----cCC--CCCEEE--EecCCccceeccchhh
Confidence 4 455554 3345542221 2 3345423445543 1223446554 322 222323 345788898 33333
Q ss_pred h-hcCeEEEeeCC
Q psy6266 177 V-DKHHVYLLRSG 188 (218)
Q Consensus 177 ~-~~~~i~ii~D~ 188 (218)
+ ++++++++.|+
T Consensus 159 ~~~~~g~~~vVDa 171 (378)
T PRK03080 159 IGADREGLTICDA 171 (378)
T ss_pred ccccCCCeEEEec
Confidence 3 56789999994
No 353
>PRK07483 hypothetical protein; Provisional
Probab=95.20 E-value=0.53 Score=42.61 Aligned_cols=102 Identities=13% Similarity=0.067 Sum_probs=54.8
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCC--CCcHHHHHHHHHHhcCCCCCCCcCCCceEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPV--LGLESFSSAATRMLLGGDASPPLREGRAFG 80 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~--~G~~~lr~aia~~~~~~~~~~~~~~~~v~~ 80 (218)
-..|...||+.-|.....-| ...|.|.+|.++.++. .. |... ... +.+..+++++.. ... ...+++
T Consensus 26 D~dG~~ylD~~~g~~~~~lG--h~~p~v~~av~~ql~~--~~--~~~~~~~~~-~~~~~lae~L~~-~~p--~~~~~v-- 93 (443)
T PRK07483 26 DATGKRYLDASGGAAVSCLG--HSHPRVIAAIHAQIDR--LA--YAHTSFFTT-EPAEALADRLVA-AAP--AGLEHV-- 93 (443)
T ss_pred eCCCCEEEEcCccHhhhccC--CCCHHHHHHHHHHHHh--cc--CccccccCC-HHHHHHHHHHHH-hCC--CCCCEE--
Confidence 34677778887664444455 4567788887766643 11 1111 112 223344555532 110 011454
Q ss_pred EEeccChhHHHHHHHHHHHhc-----CC-CeEEecCCCchhH
Q psy6266 81 VQTLSGTGALRVGAEFLHRIL-----NY-TTFYYSKPTWENH 116 (218)
Q Consensus 81 ~~t~G~~~al~~~~~~l~~l~-----~g-d~V~i~~P~y~~y 116 (218)
.-+.+|++|...++++.+... ++ .+|+...-+|-..
T Consensus 94 ~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~ 135 (443)
T PRK07483 94 YFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGN 135 (443)
T ss_pred EEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCc
Confidence 467888998888877654431 34 3566666666554
No 354
>PRK06105 aminotransferase; Provisional
Probab=95.20 E-value=0.62 Score=42.39 Aligned_cols=104 Identities=9% Similarity=-0.045 Sum_probs=55.1
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ...|.|.+|.++.+++ ..+........-+.+..+++++.. ... ..-+++ .-+
T Consensus 45 ~dG~~ylD~~~g~~~~~lG--h~~p~i~~Ai~~q~~~--~~~~~~~~~~~~~~~~~lae~L~~-~~p--~~~~~v--~f~ 115 (460)
T PRK06105 45 DAGKRYIEGMAGLWSVALG--FSEQRLVEAAARQMKK--LPFYHTFSHKSHGPVIDLAEKLVA-MAP--VPMSKV--FFT 115 (460)
T ss_pred CCCCEEEEcchhHHhccCC--CCCHHHHHHHHHHHHh--CCCeecccccCCHHHHHHHHHHHH-hCC--CCCCEE--EEe
Confidence 5677888887664333455 4567788887766643 111011111122333334555433 110 112344 468
Q ss_pred ccChhHHHHHHHHHHHhc-----CC-CeEEecCCCchhH
Q psy6266 84 LSGTGALRVGAEFLHRIL-----NY-TTFYYSKPTWENH 116 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~-----~g-d~V~i~~P~y~~y 116 (218)
.+|++|...++++..... ++ .+|+...-+|-..
T Consensus 116 ~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~ 154 (460)
T PRK06105 116 NSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGV 154 (460)
T ss_pred CCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCc
Confidence 889999988887643221 23 4677666666553
No 355
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=95.19 E-value=0.66 Score=42.00 Aligned_cols=180 Identities=12% Similarity=0.058 Sum_probs=87.4
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|.....-| ...|.|.+|.++.+++ ..+........+ .+..+++++.. .- + -..+++ .-+
T Consensus 43 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~ql~~--l~~~~~~~~~~~-~~~~la~~l~~-~~-p-~~~~~v--~f~ 112 (442)
T PRK13360 43 HDGRRVLDGTAGLWCVNAG--HGRPEIVEAVRAQAGE--LDYAPAFQMGHP-KAFELANRIAE-IA-P-GGLNHV--FFT 112 (442)
T ss_pred CCCCEEEECchhHHHhccC--CCCHHHHHHHHHHHHh--CCCcccCCcCCH-HHHHHHHHHHH-hC-C-CCCCEE--EEe
Confidence 4567777775553222334 4567778777665543 111111111222 23344444432 11 0 011344 477
Q ss_pred ccChhHHHHHHHHHHHhc-----CC-CeEEecCCCchhHHH-HHHHhCC-----------CcceeEeccCC-cC--ccc-
Q psy6266 84 LSGTGALRVGAEFLHRIL-----NY-TTFYYSKPTWENHRL-VFLNAGF-----------TEAREYRYWNP-EK--RAV- 141 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~-----~g-d~V~i~~P~y~~y~~-~~~~~g~-----------~~~~~~~~~~~-~~--~~~- 141 (218)
.+|++|...++++.+... ++ .+|+...-+|-.... .+...|. ..+..+|.... .. +..
T Consensus 113 ~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 192 (442)
T PRK13360 113 NSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKG 192 (442)
T ss_pred CCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCC
Confidence 888898888877544331 22 468877777766432 1111111 01111222100 00 000
Q ss_pred -------cHHHHHHHHhcCCCCc--EEEEcccC------CCCcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 142 -------DFTGMYEDLVNAPDNS--VIILHACA------HNPTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 142 -------d~~~~~~~l~~~~~~~--~iil~~~p------~NPTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
..+.+++.+....+.. .+++-+-. .-|.|. .|.++|++|++++|.| |+..|+
T Consensus 193 ~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~D--Ev~tG~ 261 (442)
T PRK13360 193 QPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFD--EVITGF 261 (442)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEe--chhhCC
Confidence 1334555554321122 23322211 224444 8999999999999999 898776
No 356
>PRK07481 hypothetical protein; Provisional
Probab=95.06 E-value=0.59 Score=42.36 Aligned_cols=105 Identities=12% Similarity=0.082 Sum_probs=53.2
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCC-cHHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLG-LESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G-~~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
-..|...||+.-|.....-| ...|.|.+|.++.++. ..+ +....| .-+.+..+++++.. .-.+ -..+++ .
T Consensus 38 D~dG~~ylD~~~g~~~~~lG--h~~p~v~~Ai~~ql~~--~~~-~~~~~~~~~~~~~~lae~L~~-~~~~-~~~~~v--~ 108 (449)
T PRK07481 38 DIDGKKLLDGVGGLWNVNVG--HNREEVKEAIVRQLDE--LEY-YSTFDGTTHPRAIELSYELID-MFAP-EGMRRV--F 108 (449)
T ss_pred eCCCCEEEECchhHHhhcCC--CCCHHHHHHHHHHHHh--ccc-eecccccCCHHHHHHHHHHHH-hcCC-CCCCEE--E
Confidence 35677777776553333444 4456777776665543 121 111111 11223334444432 1100 012344 4
Q ss_pred EeccChhHHHHHHHHHHHhc-----CC-CeEEecCCCchhH
Q psy6266 82 QTLSGTGALRVGAEFLHRIL-----NY-TTFYYSKPTWENH 116 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~-----~g-d~V~i~~P~y~~y 116 (218)
-+.+|++|...++++-+... +| .+|+...=+|-..
T Consensus 109 f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~ 149 (449)
T PRK07481 109 FSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGT 149 (449)
T ss_pred EcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCc
Confidence 67888898888877544321 23 4677777776664
No 357
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=95.05 E-value=0.46 Score=42.85 Aligned_cols=178 Identities=11% Similarity=0.014 Sum_probs=86.3
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCC-ccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLN-HEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
..|...||+.-|.....-| .-.|.|.+|.++.+++.... ..+.......+|-+.+++..- ...+++ .-
T Consensus 41 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~p-------~~~~~v--~f 109 (429)
T PRK06173 41 KDGRRLIDGMSSWWAALHG--YNHPRLNAAATNQLAKMSHIMFGGFTHEPAVELAQKLLEILP-------PSLNKI--FF 109 (429)
T ss_pred CCCCEEEEccchHHhccCC--CCCHHHHHHHHHHHHhcCCccccccCCHHHHHHHHHHHhhCC-------CCcCEE--EE
Confidence 4566666665543222334 34577777766655331101 112223333444444443321 112454 47
Q ss_pred eccChhHHHHHHHHHHHhc-----CC-CeEEecCCCchhHHH-HHHHhCC------------CcceeEeccCC---cCc-
Q psy6266 83 TLSGTGALRVGAEFLHRIL-----NY-TTFYYSKPTWENHRL-VFLNAGF------------TEAREYRYWNP---EKR- 139 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~-----~g-d~V~i~~P~y~~y~~-~~~~~g~------------~~~~~~~~~~~---~~~- 139 (218)
+.+|++|...++++.+... +| ..|+...-+|-.... .+...+. ..+..+|.... +.+
T Consensus 110 ~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 189 (429)
T PRK06173 110 ADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWN 189 (429)
T ss_pred eCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHH
Confidence 7888898888777644331 33 467777777766321 1111110 00111221000 000
Q ss_pred cccHHHHHHHHhcCCCCcEEEEcccC--CC-------CcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 140 AVDFTGMYEDLVNAPDNSVIILHACA--HN-------PTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 140 ~~d~~~~~~~l~~~~~~~~iil~~~p--~N-------PTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
.-+++.+++.+.....+-..++. -| +. |.+. ++.++|++|++.+|.| |+..|+
T Consensus 190 ~~~l~~l~~~i~~~~~~iAAvi~-EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~D--Ev~tG~ 253 (429)
T PRK06173 190 DEAIEPLQDLLEQKGDEIAALIL-EPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFD--EIATGF 253 (429)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEE-cchhhccCCcccCCHHHHHHHHHHHHHcCCeEEec--chhcCC
Confidence 01355566666532222222222 23 22 3344 8999999999999999 888876
No 358
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=94.92 E-value=0.49 Score=41.41 Aligned_cols=99 Identities=9% Similarity=0.027 Sum_probs=56.9
Q ss_pred EEecc-ChhHHHHHHHHHHHhcCCCeEEecC-CCchhHH-HHHHHhCCCcceeEec--cCCcCccccHHHHHHHHhcCCC
Q psy6266 81 VQTLS-GTGALRVGAEFLHRILNYTTFYYSK-PTWENHR-LVFLNAGFTEAREYRY--WNPEKRAVDFTGMYEDLVNAPD 155 (218)
Q Consensus 81 ~~t~G-~~~al~~~~~~l~~l~~gd~V~i~~-P~y~~y~-~~~~~~g~~~~~~~~~--~~~~~~~~d~~~~~~~l~~~~~ 155 (218)
+.+.| +|+|+..++..+ +.+||++++.. -.|+... .+.+..|+ +..+.. +.+....++++.+. +. +
T Consensus 59 ~~~~gsgT~a~ea~~~nl--~~~~~~~l~i~~G~fg~r~~~~a~~~g~--~~~~~~~~~~~~~~~~~~~~~~--~~---~ 129 (349)
T TIGR01364 59 LFLQGGATGQFAAVPLNL--LAEGKVADYIVTGAWSKKAAKEAKKYGV--VNVVASGKEGNYTKIPDPSTWE--IS---E 129 (349)
T ss_pred EEEcCCchHHHHHHHHhc--CCCCCeEEEEECCHHHHHHHHHHHHhCC--cEEEeccccCCCCCCCCHHhcC--CC---C
Confidence 46655 999999988765 55888877664 4454433 35566665 333332 10111233554333 11 2
Q ss_pred CcEEEEcccCCCCcHHHHHHHhhcCeEEEeeCC
Q psy6266 156 NSVIILHACAHNPTAQQVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 156 ~~~iil~~~p~NPTG~~l~~l~~~~~i~ii~D~ 188 (218)
+..++...-..|.||....++++.++++++.|+
T Consensus 130 ~~~~v~~th~ETstGv~~~~l~~~~~~l~iVDa 162 (349)
T TIGR01364 130 DAAYVHYCANETIHGVEFRELPDVKNAPLVADM 162 (349)
T ss_pred CCCEEEEcCCCCcccEecceecccCCCeEEEEc
Confidence 222333233467777765578888899999994
No 359
>PRK08297 L-lysine aminotransferase; Provisional
Probab=94.83 E-value=0.69 Score=41.87 Aligned_cols=22 Identities=18% Similarity=0.342 Sum_probs=20.9
Q ss_pred HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 172 QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
.|.++|++|++.+|.| |++.||
T Consensus 250 ~lr~lc~~~g~llI~D--EV~tGf 271 (443)
T PRK08297 250 AMRELCDEHDALLIFD--EVQTGV 271 (443)
T ss_pred HHHHHHHHcCCEEEEe--chhhcc
Confidence 8999999999999999 999987
No 360
>PRK07036 hypothetical protein; Provisional
Probab=94.76 E-value=0.72 Score=42.07 Aligned_cols=104 Identities=14% Similarity=0.091 Sum_probs=52.2
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCC-CcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVL-GLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~-G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
..|...||+.-|.....-| ...|.|.+|.++.++. ..+ .+... -.-+.+..+++++.. .- + -..+++ .-
T Consensus 48 ~dG~~ylD~~~g~~~~~lG--h~~p~v~~Ai~~q~~~--~~~-~~~~~~~~~~~~~~lae~L~~-~~-p-~~~~~v--~f 117 (466)
T PRK07036 48 ADGRRYLDGIGGMWCVNVG--YGREEMADAIADQARR--LPY-YTPFGDMTNAPAAELAAKLAE-LA-P-GDLNHV--FL 117 (466)
T ss_pred CCCCEEEECcccHHhhcCC--CCCHHHHHHHHHHHHh--Ccc-cccccccCCHHHHHHHHHHHH-hC-C-CCcCEE--EE
Confidence 4566667765553222334 3467788776665532 111 11110 112333445555532 11 0 112344 47
Q ss_pred eccChhHHHHHHHHHHHhc-----CC-CeEEecCCCchhHH
Q psy6266 83 TLSGTGALRVGAEFLHRIL-----NY-TTFYYSKPTWENHR 117 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~-----~g-d~V~i~~P~y~~y~ 117 (218)
+.+|++|...++++.+... ++ .+|+...-+|-...
T Consensus 118 ~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t 158 (466)
T PRK07036 118 TTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGST 158 (466)
T ss_pred eCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCcc
Confidence 7888898888777543321 22 56777777776643
No 361
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=94.59 E-value=0.88 Score=39.14 Aligned_cols=107 Identities=13% Similarity=0.180 Sum_probs=65.4
Q ss_pred EEeccChhHHHHHHHHHHHhcCCCeEEec--CCCchhHHHHH----------HHhCCCcceeEeccCCcCccccHHHHHH
Q psy6266 81 VQTLSGTGALRVGAEFLHRILNYTTFYYS--KPTWENHRLVF----------LNAGFTEAREYRYWNPEKRAVDFTGMYE 148 (218)
Q Consensus 81 ~~t~G~~~al~~~~~~l~~l~~gd~V~i~--~P~y~~y~~~~----------~~~g~~~~~~~~~~~~~~~~~d~~~~~~ 148 (218)
.+...++.|+..++.-+ |.|||+.+.. .|+ -....++ +-.|. +-+.+|+. . ...+|++.+.+
T Consensus 87 pq~isGTHAI~~aLfg~--LRpgDell~i~G~PY-DTLeevIG~rg~~~gSL~dfgi-~Y~~v~Lt-~-~gkiD~~~v~~ 160 (416)
T COG4100 87 PQIISGTHAIACALFGI--LRPGDELLYITGSPY-DTLEEVIGLRGEGQGSLKDFGI-KYKAVPLT-A-DGKIDIQAVKT 160 (416)
T ss_pred eeeecchhHHHHHHHhc--cCCCCeEEEecCCcc-hhHHHHhccCCCCcccHHHhCc-ceeecccc-c-CCcccHHHHHH
Confidence 46678899999887765 7899998765 343 2222222 23344 44555553 2 35789999999
Q ss_pred HHhcCCCCcEEEEcccC---CCCcHH-----HHHHHhhc--CeEEEeeCCceeeccCCC
Q psy6266 149 DLVNAPDNSVIILHACA---HNPTAQ-----QVAHMVDK--HHVYLLRSGRINMCGLTT 197 (218)
Q Consensus 149 ~l~~~~~~~~iil~~~p---~NPTG~-----~l~~l~~~--~~i~ii~D~r~~y~~l~~ 197 (218)
.+.. ..+.+.+|-|+ .-|+=. ++..+.|+ -++.++.| -+|.+|.-
T Consensus 161 ~i~~--~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVD--NCYGEFvE 215 (416)
T COG4100 161 AISD--RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVD--NCYGEFVE 215 (416)
T ss_pred hcCc--cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEe--ccchhhhh
Confidence 8863 22344555332 223221 44455554 47899999 88887754
No 362
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=94.54 E-value=0.013 Score=51.30 Aligned_cols=147 Identities=16% Similarity=0.112 Sum_probs=13.5
Q ss_pred CCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcC-CCceEEEEeccChhHHHHHHHHHHHh
Q psy6266 22 CKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLR-EGRAFGVQTLSGTGALRVGAEFLHRI 100 (218)
Q Consensus 22 ~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~-~~~v~~~~t~G~~~al~~~~~~l~~l 100 (218)
|.-+..+.+.++..++... ..+.+|--..|-..=|..-.+.+.. . +. .+. .+++.....|+.+++..+
T Consensus 14 GRs~l~~~a~~a~~~~a~~-Y~nLE~dl~~G~Rg~R~~~v~~ll~-~----ltgAea--A~VvNnnaAAv~L~l~~l--- 82 (367)
T PF03841_consen 14 GRSPLSEEAIEAVAEVASG-YSNLEYDLETGKRGSRYAHVEELLC-E----LTGAEA--ALVVNNNAAAVLLALNTL--- 82 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccc-ccccccccccccccccccccccccc-c----cccccc--cccccccccccccccccc---
Confidence 3345666677666555432 1233454444433333222222211 0 11 122 346667667777776655
Q ss_pred cCCCeEEecCCCchh------HHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCC-----c
Q psy6266 101 LNYTTFYYSKPTWEN------HRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNP-----T 169 (218)
Q Consensus 101 ~~gd~V~i~~P~y~~------y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NP-----T 169 (218)
-+|.+|+++.=--.. ...+++..|+ +.+.+-.. .....+..+++|.+ ++.+++-.-++|. |
T Consensus 83 a~~~EvIvsRGelVeiGgsFRip~vm~~sGa-~lvEVGtt----N~t~~~Dye~AI~e---~Ta~ll~Vh~Sn~~i~GFt 154 (367)
T PF03841_consen 83 AKGKEVIVSRGELVEIGGSFRIPDVMRQSGA-RLVEVGTT----NRTHLSDYEKAITE---NTAALLKVHTSNFRIQGFT 154 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccccccccccccccc-cccccccc----cccccccccccccc---ccccccccccccccccccc
Confidence 358888877433222 2356777888 78887542 23345566677753 3433332223343 3
Q ss_pred HH----HHHHHhhcCeEEEeeC
Q psy6266 170 AQ----QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 170 G~----~l~~l~~~~~i~ii~D 187 (218)
+. ++++++++|++.++.|
T Consensus 155 ~~~~~~el~~la~~~~lp~i~D 176 (367)
T PF03841_consen 155 GEVSLEELAELAKEHGLPVIVD 176 (367)
T ss_dssp ------HHHHHHHHHT--EEEE
T ss_pred ccccHHHHHHHHhhcCCcEEEE
Confidence 33 8999999999999999
No 363
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=94.42 E-value=1.1 Score=40.40 Aligned_cols=23 Identities=17% Similarity=0.294 Sum_probs=21.1
Q ss_pred HHHHHhhcCeEEEeeCCceeeccCC
Q psy6266 172 QVAHMVDKHHVYLLRSGRINMCGLT 196 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D~r~~y~~l~ 196 (218)
.|.++|++|++.+|.| |++.|+-
T Consensus 243 ~l~~lc~~~g~llI~D--EV~tG~G 265 (431)
T TIGR03251 243 AMRALCDEHDALLIFD--EVQTGVG 265 (431)
T ss_pred HHHHHHHHcCCEEEEe--cchhccC
Confidence 7999999999999999 9998863
No 364
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=93.98 E-value=1.4 Score=40.27 Aligned_cols=183 Identities=12% Similarity=0.078 Sum_probs=89.5
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHH-hhcCCCCccC-cCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKEL-AADDSLNHEY-LPVLGLESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~~~Y-~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
..|...||+.-|.....-| ...|.|.+|.++. ..+ ...+.. ....-..+|-+.+.+.+.. .. + -..+++ .
T Consensus 55 ~dG~~ylD~~sg~~~~~lG--h~~p~i~~Ai~~q~~~~-~l~~~~~~~~~~~~~la~~l~~~l~~-~~-p-~~~~~v--~ 126 (464)
T TIGR00699 55 VDGNRLLDLYSQISSIPIG--YNNPALLKAAQSPEMAT-TLINRPALGNFPSKDWAKILKEGILK-VA-P-KGQDQV--W 126 (464)
T ss_pred CCCCEEEEccCCHhhhcCC--CCCHHHHHHHHHHHHHH-hhcccccCCcHHHHHHHHHHHHhHHh-hC-C-CCcCEE--E
Confidence 5677888887775444455 4567777776652 222 111111 1111122333333321221 11 0 011344 5
Q ss_pred EeccChhHHHHHHHHHHHhc------------------------CCC---eEEecCCCchhHHHHHHHhCCCcc------
Q psy6266 82 QTLSGTGALRVGAEFLHRIL------------------------NYT---TFYYSKPTWENHRLVFLNAGFTEA------ 128 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~------------------------~gd---~V~i~~P~y~~y~~~~~~~g~~~~------ 128 (218)
-+.+|++|...++++..... +|. +|+...-+|-..............
T Consensus 127 f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~ 206 (464)
T TIGR00699 127 TGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDI 206 (464)
T ss_pred EeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCC
Confidence 78889999888887543220 121 688888887665432222211011
Q ss_pred -----eeEeccC---------Cc--C-ccccHHHHHHHHhcCCCC-cEEEEcccCCC------CcHH--HHHHHhhcCeE
Q psy6266 129 -----REYRYWN---------PE--K-RAVDFTGMYEDLVNAPDN-SVIILHACAHN------PTAQ--QVAHMVDKHHV 182 (218)
Q Consensus 129 -----~~~~~~~---------~~--~-~~~d~~~~~~~l~~~~~~-~~iil~~~p~N------PTG~--~l~~l~~~~~i 182 (218)
..+|+.. +. . ..-+++.+++.+++.... ..+++-+-..+ |.+. +|.++|++|++
T Consensus 207 ~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~ 286 (464)
T TIGR00699 207 PAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNV 286 (464)
T ss_pred CCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 0111100 00 0 001344556666532222 22333222222 3343 89999999999
Q ss_pred EEeeCCceeeccCC
Q psy6266 183 YLLRSGRINMCGLT 196 (218)
Q Consensus 183 ~ii~D~r~~y~~l~ 196 (218)
.+|.| |+..|+-
T Consensus 287 lLI~D--EV~tGfG 298 (464)
T TIGR00699 287 AFIVD--EVQTGVG 298 (464)
T ss_pred EEEEe--eeeeCCC
Confidence 99999 9988873
No 365
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=93.64 E-value=0.36 Score=42.39 Aligned_cols=144 Identities=12% Similarity=-0.120 Sum_probs=73.7
Q ss_pred CccCchHHHHHHHHHhhc-CCCCccCcC--CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHH
Q psy6266 23 KPWVLPVVRQAEKELAAD-DSLNHEYLP--VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHR 99 (218)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~-~~~~~~Y~~--~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~ 99 (218)
...+++.|.+|+.+.... ..-.| ..+ ..=+.+.|+.+++++.. .++.+| ++.+.++|.++..++..+
T Consensus 11 P~~~~~~v~~a~~~~~~~~~~~~h-r~~~f~~~~~~~r~~l~~l~~~------~~~~~v-~f~~gs~T~a~~~~~~~l-- 80 (361)
T TIGR01366 11 PSKVRLEQLQALTTTAASLFGTSH-RQAPVKNLVGRVREGLAELFSL------PDGYEV-ILGNGGATAFWDAATFGL-- 80 (361)
T ss_pred CcCCCHHHHHHHHhcCccccccCc-CChHHHHHHHHHHHHHHHHhCC------CCCceE-EEECCchhHHHHHHHHhc--
Confidence 356788899886532100 00011 111 22345667777666532 112344 234456999999888765
Q ss_pred hcCCCeEEecCCCchhHHH-HHHHh--CCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH--HHH
Q psy6266 100 ILNYTTFYYSKPTWENHRL-VFLNA--GFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ--QVA 174 (218)
Q Consensus 100 l~~gd~V~i~~P~y~~y~~-~~~~~--g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~--~l~ 174 (218)
+. .+..++..=.|+.... ..+.. +. ++..++.. ....++. .+ .+++.++..+-..|-||. -+.
T Consensus 81 ~~-~~~l~i~~G~~~~~~~~~a~~~~~~~-~~~~~~~~--~~~~~~~-----~~---~~~~~lV~~~h~et~tG~~~pi~ 148 (361)
T TIGR01366 81 IE-KKSLHLSFGEFSSKFAKAVKLAPWLG-EPIIVTAD--PGSAPEP-----QA---DPGVDVIAWAHNETSTGVAVPVR 148 (361)
T ss_pred cc-ccccEEecCHHHHHHHHHHHhhhccC-CceEEecC--CCCCCCC-----cc---CCCCCEEEEcccCCccceecccc
Confidence 32 3444454444543222 22221 23 45555431 1112222 11 234444544556788887 466
Q ss_pred HHhhcCeEEEeeCC
Q psy6266 175 HMVDKHHVYLLRSG 188 (218)
Q Consensus 175 ~l~~~~~i~ii~D~ 188 (218)
+++++++++++.|.
T Consensus 149 ~I~~~~g~~~iVDa 162 (361)
T TIGR01366 149 RPEGSDDALVVIDA 162 (361)
T ss_pred cccccCCCeEEEEc
Confidence 66788999999994
No 366
>PLN02397 aspartate transaminase
Probab=93.17 E-value=0.12 Score=46.32 Aligned_cols=43 Identities=44% Similarity=0.743 Sum_probs=39.1
Q ss_pred HHHHHhhcCeEEEeeCCceeeccCCCCCHHHHHHHHHHHHHcC
Q psy6266 172 QVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDAVTSI 214 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D~r~~y~~l~~~ni~~~~~a~~~~~~~~ 214 (218)
....|+++++|+++.+||+++.++..+++++.+++|+++++++
T Consensus 380 ~~~~Ll~~~~V~v~~~~Ri~~~~~~~~~i~~~~~~i~~~~~~~ 422 (423)
T PLN02397 380 QVDRMTKEYHIYMTRDGRISMAGLSSKNVPYLADAIHAVVTNA 422 (423)
T ss_pred HHHHHHHhCCEEECCCCeEEEeeCCHHHHHHHHHHHHHHHhcc
Confidence 5567778999999999999999999999999999999999764
No 367
>KOG1401|consensus
Probab=92.92 E-value=6.1 Score=35.31 Aligned_cols=182 Identities=16% Similarity=0.077 Sum_probs=96.0
Q ss_pred CCCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 2 YMSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 2 ~~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
+-.+|.-.||+.-|....--| +.-|.|.+|+.+-... ..|.-.+.--.+ ..++...+... .+. -..++| .
T Consensus 51 ~D~~g~EyiD~~ssw~~~~~G--hanpev~ral~~q~~k--~~hs~~~~~t~e-av~l~~~l~~~-~~~--~~~~rv--f 120 (433)
T KOG1401|consen 51 FDPDGKEYIDFTSSWAVTILG--HANPEVARALAEQAKK--LGHSSNGYFTLE-AVELEEVLSAV-LGK--GSAERV--F 120 (433)
T ss_pred ecCCcceeeeeccceeccccC--CCCHHHHHHHHHHHhh--heeccCccccHH-HHHHHHHHHhc-ccC--CCccEE--E
Confidence 446788889988887655555 4466777765543322 223222222122 23322222211 111 145666 4
Q ss_pred EeccChhHHHHHHHHHHHhcCCCe------EEecCCCchhHHH-HHHHhCCCcceeEecc--CCcC-c--cccHHHHHHH
Q psy6266 82 QTLSGTGALRVGAEFLHRILNYTT------FYYSKPTWENHRL-VFLNAGFTEAREYRYW--NPEK-R--AVDFTGMYED 149 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~gd~------V~i~~P~y~~y~~-~~~~~g~~~~~~~~~~--~~~~-~--~~d~~~~~~~ 149 (218)
-...|++|...++.+-++...-+. ++-..=+|..... .+...+- .....|.. .++. . --|...+++.
T Consensus 121 f~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~-s~y~~~~~p~~p~v~~~~ynd~t~l~k~ 199 (433)
T KOG1401|consen 121 FCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGN-SKYGLPFDPIAPDVVTAEYNDSTALEKL 199 (433)
T ss_pred EecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcc-cccCCCCCCCCCceeecccCCHHHHHHH
Confidence 778889988887776444332222 6666667666443 2332232 23333220 0110 0 1177888888
Q ss_pred HhcCCC-CcEEEEcccCCCCcHH---------HHHHHhhcCeEEEeeCCceeeccCCC
Q psy6266 150 LVNAPD-NSVIILHACAHNPTAQ---------QVAHMVDKHHVYLLRSGRINMCGLTT 197 (218)
Q Consensus 150 l~~~~~-~~~iil~~~p~NPTG~---------~l~~l~~~~~i~ii~D~r~~y~~l~~ 197 (218)
++.... -..+|+-+ -+.--|. .|..+|+++++.+|.| |+..||..
T Consensus 200 ~~~h~~~IaAVIvEP-iqGaGG~~p~~peFl~~L~k~C~~~~vl~I~D--EV~tG~gR 254 (433)
T KOG1401|consen 200 FESHKGEIAAVIVEP-IQGAGGIIPADPEFLIGLRKECDDNGVLLIFD--EVQTGLGR 254 (433)
T ss_pred HHhCCCceEEEEEec-ccCCCCcccCCHHHHHHHHHHHhhcCceEEee--hhhhCccc
Confidence 876521 12334322 1111111 5889999999999999 99998643
No 368
>PRK06148 hypothetical protein; Provisional
Probab=92.47 E-value=2.3 Score=42.72 Aligned_cols=99 Identities=15% Similarity=0.040 Sum_probs=53.5
Q ss_pred CCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 4 SSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 4 ~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
..|...||+.-|+ ..-| ...|.|.+|.++.++.......| ......+|-+.+++..-+ ..+++ .-+
T Consensus 621 ~dG~~ylD~~~g~--~~lG--H~hp~v~~Ai~~q~~~l~~~~~~-~~~~~~~lAe~L~~~~p~-------~~~~v--~f~ 686 (1013)
T PRK06148 621 NRGRAYLDCFNNV--CHVG--HAHPRVVAAAARQAARLNTNTRY-LHDAIVAYAERLTATLPD-------GLTVA--FFV 686 (1013)
T ss_pred CCCCEEEEcccCh--hhcC--CCCHHHHHHHHHHHhhcCCcCCc-CCHHHHHHHHHHHHhCCC-------CcCEE--EEe
Confidence 4567777776664 2345 45677887766655331112222 233333444433332211 11343 467
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhH
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENH 116 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y 116 (218)
.+|++|...++++-+.....+.|+..+-+|-..
T Consensus 687 nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~ 719 (1013)
T PRK06148 687 NSGSEANSLALRLARAHTGQRDAIVLDHAYHGT 719 (1013)
T ss_pred CCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCC
Confidence 888999988888654433345677777776654
No 369
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=92.45 E-value=1.5 Score=39.81 Aligned_cols=100 Identities=11% Similarity=0.049 Sum_probs=51.7
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcC--CCCcH--HHHHHHHHHhcCCCCCCCcCCCce
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLP--VLGLE--SFSSAATRMLLGGDASPPLREGRA 78 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~--~~G~~--~lr~aia~~~~~~~~~~~~~~~~v 78 (218)
-.+|..+||-.-|-+...-| .--+.|.+|+++-+++ ..+ |.+ ..+.| +|-+.+++..=+ . .-++|
T Consensus 40 d~~G~r~lDg~sg~W~~~~G--h~~~~i~~Ai~~Q~~~--l~~-~~~~~~t~~Pa~~LA~~L~~~aP~--~----~l~~v 108 (449)
T COG0161 40 DIDGRRYLDGMSGLWCVNHG--HGRPEIAEAIKKQLDK--LPH-VMFGGFTHEPAIELAEKLAELAPE--G----GLDHV 108 (449)
T ss_pred eCCCCEEEecccHHHHhhcC--cCCHHHHHHHHHHHHh--CCc-hhhcccCCchHHHHHHHHHHhCCC--C----CccEE
Confidence 45677777877776666556 3456667665544433 122 211 22333 333333333210 0 02344
Q ss_pred EEEEeccChhHHHHHHHHHHH-hc----CCCe-EEecCCCchh
Q psy6266 79 FGVQTLSGTGALRVGAEFLHR-IL----NYTT-FYYSKPTWEN 115 (218)
Q Consensus 79 ~~~~t~G~~~al~~~~~~l~~-l~----~gd~-V~i~~P~y~~ 115 (218)
+-|.+|++|...++.+... ++ |.+. ++.-..+|-.
T Consensus 109 --Ff~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG 149 (449)
T COG0161 109 --FFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHG 149 (449)
T ss_pred --EEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCc
Confidence 5888999988877764322 22 3333 6666666643
No 370
>PRK06149 hypothetical protein; Provisional
Probab=92.21 E-value=4.4 Score=40.46 Aligned_cols=99 Identities=11% Similarity=-0.037 Sum_probs=52.1
Q ss_pred CCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 3 MSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 3 ~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
...|...||+.-|.. .-| ...|.|.+|.++.+.......+| .. +....+++++.. .. + -..+++ +-
T Consensus 581 D~dG~~ylD~~~~~~--~lG--h~hp~v~~Ai~~q~~~l~~~~~~----~~-~~~~elae~L~~-~~-p-~~~~~v--~f 646 (972)
T PRK06149 581 DMAGRSYLDMVNNVT--VLG--HGHPRLAAAAARQWSLLNTNSRF----HY-AAVAEFSERLAA-LA-P-DGLDTV--FL 646 (972)
T ss_pred eCCCCEEEECCCCcc--ccC--CCCHHHHHHHHHHHHhccccccc----cC-HHHHHHHHHHHH-hC-C-CCcCEE--EE
Confidence 356778888876642 234 34677777765554331111112 12 223334444432 11 0 011343 57
Q ss_pred eccChhHHHHHHHHHHHhcCCCeEEecCCCchh
Q psy6266 83 TLSGTGALRVGAEFLHRILNYTTFYYSKPTWEN 115 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~ 115 (218)
+.+|++|...++++.+.....+.|+..+=+|-.
T Consensus 647 ~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG 679 (972)
T PRK06149 647 VNSGSEANDLAIRLAWAASGRRDVVSVLEAYHG 679 (972)
T ss_pred eCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCC
Confidence 788899988888754444334567777776664
No 371
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=91.58 E-value=3.3 Score=36.33 Aligned_cols=148 Identities=9% Similarity=-0.060 Sum_probs=71.9
Q ss_pred CccCchHHHHHHHHHhhcC--CCCccCcCCCCcHH-------HHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHH
Q psy6266 23 KPWVLPVVRQAEKELAADD--SLNHEYLPVLGLES-------FSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVG 93 (218)
Q Consensus 23 ~~~~~~~v~~a~~~~~~~~--~~~~~Y~~~~G~~~-------lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~ 93 (218)
...+++.|++|+.+...+. .+.-.|....=.++ .|+.+++. ++ . .++.++ .+.+.++++++..+
T Consensus 11 P~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l-~~-~----~~~~~v-~~~~gsgt~~~Ea~ 83 (360)
T PRK05355 11 PAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLREL-LN-I----PDNYKV-LFLQGGASLQFAMV 83 (360)
T ss_pred CCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHH-hC-C----CCCcEE-EEEcCCchHHHHHH
Confidence 4578999999977654220 01111222222233 33333332 33 1 112334 34556677788877
Q ss_pred HHHHHHhcCCCeEEecCCC-chhHH-HHHHHhCCCcceeEeccCCcCccccHHHHHH-HHhcCCCCcEEEEcccCCCCcH
Q psy6266 94 AEFLHRILNYTTFYYSKPT-WENHR-LVFLNAGFTEAREYRYWNPEKRAVDFTGMYE-DLVNAPDNSVIILHACAHNPTA 170 (218)
Q Consensus 94 ~~~l~~l~~gd~V~i~~P~-y~~y~-~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~-~l~~~~~~~~iil~~~p~NPTG 170 (218)
+.-+ +.+||++++..=+ |+... .+.+..|. . ..+...... ...+...+.+ .|.+ +.+.+.+ .-..+.||
T Consensus 84 ~~nl--~~~g~~~l~i~~G~fg~r~~~~a~~~g~-~-~~~~~~~~~-g~~~~~~~~~~~l~~--~~~~V~~-th~eTstG 155 (360)
T PRK05355 84 PMNL--LGGGKKADYVDTGSWSKKAIKEAKKYGE-V-NVAASSEDD-GFTYIPPLDEWQLSD--DAAYVHY-TSNETIDG 155 (360)
T ss_pred HHhc--CCCCCeEEEEECCHHHHHHHHHHHHhCC-c-eEEeccccc-CCCCCCChhhccCCC--CCCEEEE-ccCCCcce
Confidence 6544 5688888776544 44333 35666676 4 333221001 1222223333 4532 2233333 22345556
Q ss_pred H---HHHHHhhcCeEEEeeCC
Q psy6266 171 Q---QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 171 ~---~l~~l~~~~~i~ii~D~ 188 (218)
. .|.++ ++++++.|+
T Consensus 156 v~~~~i~~i---~g~l~vVDa 173 (360)
T PRK05355 156 TEFHELPDT---GDVPLVADM 173 (360)
T ss_pred EecCccccc---CCCcEEEEc
Confidence 5 24444 899999994
No 372
>KOG1383|consensus
Probab=91.57 E-value=0.4 Score=43.21 Aligned_cols=110 Identities=13% Similarity=0.121 Sum_probs=74.2
Q ss_pred EEEeccChhHHHHHHHHHH--Hhc--C--CCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC
Q psy6266 80 GVQTLSGTGALRVGAEFLH--RIL--N--YTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA 153 (218)
Q Consensus 80 ~~~t~G~~~al~~~~~~l~--~l~--~--gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 153 (218)
...|+|+++++-++-..-. ... + -.+++.+.-.-..+....+..+. +...+|+. +..+.+|+..+++.+.
T Consensus 141 g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v-~l~~V~~~-~~~~~~D~~k~~~~i~-- 216 (491)
T KOG1383|consen 141 GCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEV-ELREVPLD-EGDYRVDPGKVVRMID-- 216 (491)
T ss_pred CccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEE-EEEeeecc-ccceEecHHHHHHHhc--
Confidence 4689999998433222111 011 1 13444455555555566677777 88888884 4678899999999886
Q ss_pred CCCcEEEEcccCCCCcHH-----HHHHHhhc-CeEEEeeCCceeeccCC
Q psy6266 154 PDNSVIILHACAHNPTAQ-----QVAHMVDK-HHVYLLRSGRINMCGLT 196 (218)
Q Consensus 154 ~~~~~iil~~~p~NPTG~-----~l~~l~~~-~~i~ii~D~r~~y~~l~ 196 (218)
+.++.++..-|+=|+|. +|.+++.| +++.+-.| .+-.+|.
T Consensus 217 -eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvD--a~~GgFi 262 (491)
T KOG1383|consen 217 -ENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVD--ACLGGFI 262 (491)
T ss_pred -cceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeec--ccCcccc
Confidence 44666666678889998 78888877 99999999 5555543
No 373
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=91.25 E-value=4.9 Score=35.55 Aligned_cols=134 Identities=13% Similarity=0.088 Sum_probs=81.6
Q ss_pred CCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHH---hcCCCeEEec-CCCchhHHH
Q psy6266 43 LNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHR---ILNYTTFYYS-KPTWENHRL 118 (218)
Q Consensus 43 ~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~---l~~gd~V~i~-~P~y~~y~~ 118 (218)
+...|+-+.+.-.|++++.+. || .. - ++-|.=|-+|-.+.+..+.+ ..||....++ +-.|-.-..
T Consensus 71 GDEAYagsrs~~~L~~avkdi-fG-fq-------~--~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~ 139 (471)
T COG3033 71 GDEAYAGSRSYYALADAVKDI-FG-FQ-------Y--TIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRG 139 (471)
T ss_pred cchhhcccccHHHHHHHHHHh-cC-ce-------e--eeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhH
Confidence 355699999999999987654 45 21 1 23566666676766665533 1245333333 334444455
Q ss_pred HHHHhCCCcceeEeccCCcC--------ccccHHHHHHHHhcCC--CCcEEEEcccCCCCcHH--------HHHHHhhcC
Q psy6266 119 VFLNAGFTEAREYRYWNPEK--------RAVDFTGMYEDLVNAP--DNSVIILHACAHNPTAQ--------QVAHMVDKH 180 (218)
Q Consensus 119 ~~~~~g~~~~~~~~~~~~~~--------~~~d~~~~~~~l~~~~--~~~~iil~~~p~NPTG~--------~l~~l~~~~ 180 (218)
-.+..|+ .++.++....-+ ..+|++.+++.|.+.. .-+.+++-.+.|--.|. ++.++|++|
T Consensus 140 h~~~ng~-~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky 218 (471)
T COG3033 140 HIQINGA-TPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKY 218 (471)
T ss_pred HHHhcCC-ccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHc
Confidence 6677788 787766521111 1347888888887642 23444443333333333 688999999
Q ss_pred eEEEeeCC
Q psy6266 181 HVYLLRSG 188 (218)
Q Consensus 181 ~i~ii~D~ 188 (218)
+|.++-|-
T Consensus 219 ~ipvv~Da 226 (471)
T COG3033 219 DIPVVMDA 226 (471)
T ss_pred CCcEEeeh
Confidence 99999994
No 374
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=90.39 E-value=3 Score=41.31 Aligned_cols=141 Identities=18% Similarity=0.208 Sum_probs=76.4
Q ss_pred eeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCC-----Cc----HHHHHHHHHHhcCCCCCCCcCCCceEEEEe
Q psy6266 13 IRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVL-----GL----ESFSSAATRMLLGGDASPPLREGRAFGVQT 83 (218)
Q Consensus 13 ~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~-----G~----~~lr~aia~~~~~~~~~~~~~~~~v~~~~t 83 (218)
+.|.| + -.+|+.|.+. ++..++..+.|+|.+ |. -+|++.++++. | .+..+. -..
T Consensus 70 g~G~y---~--~~~p~~i~r~---v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLt-G------m~~aNa--Sl~ 132 (939)
T TIGR00461 70 GMGYY---G--TILPPVIQRN---LLENPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLT-G------LPVANA--SLL 132 (939)
T ss_pred CCCcC---C--CcCChHHHHH---HHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHH-C------CChhhh--hcc
Confidence 56655 1 2356666643 333333457788854 43 34555555543 2 111221 133
Q ss_pred ccChhHHHHHHHHHHH-hcCCCeEEecCCCchhHHHHHH----HhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcE
Q psy6266 84 LSGTGALRVGAEFLHR-ILNYTTFYYSKPTWENHRLVFL----NAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSV 158 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~-l~~gd~V~i~~P~y~~y~~~~~----~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~ 158 (218)
.+++.+...++++... ..++++|++++-.+|.+...++ ..|. +++.+ |++.+++.+ ....
T Consensus 133 d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~-~v~~~----------~~~~l~~~~----~~~~ 197 (939)
T TIGR00461 133 DEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGI-EVIVV----------DCSDIKKAV----DVFG 197 (939)
T ss_pred chhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCc-EEEEE----------cHHHHhhcC----CEEE
Confidence 5566555544444321 1234899999999999886665 5566 55554 233333333 1123
Q ss_pred EEEcccCCCCcHH-----HHHHHhhcCeEEEeeC
Q psy6266 159 IILHACAHNPTAQ-----QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 159 iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D 187 (218)
++++ +| |-+|. +|.+++++++.+++.+
T Consensus 198 v~~q-~P-n~~G~ied~~~i~~~~h~~gal~~~~ 229 (939)
T TIGR00461 198 CLLQ-YP-ATDGSILDYKQLIDALHSHKSLVSVA 229 (939)
T ss_pred EEEE-CC-CCCeEEecHHHHHHHHHHcCCEEEEE
Confidence 4444 33 55676 7888888888776654
No 375
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=88.53 E-value=4.4 Score=35.94 Aligned_cols=92 Identities=12% Similarity=0.073 Sum_probs=58.7
Q ss_pred EEEeccChhHHHHHHHHHHHh-cCCCeEEecCCCchhH-H-HHHHHhCCCc-ceeEeccCCcCccccHHHHHHHHhcCCC
Q psy6266 80 GVQTLSGTGALRVGAEFLHRI-LNYTTFYYSKPTWENH-R-LVFLNAGFTE-AREYRYWNPEKRAVDFTGMYEDLVNAPD 155 (218)
Q Consensus 80 ~~~t~G~~~al~~~~~~l~~l-~~gd~V~i~~P~y~~y-~-~~~~~~g~~~-~~~~~~~~~~~~~~d~~~~~~~l~~~~~ 155 (218)
.+.+.+|++++..+..-+ + .+||.|++.. .|+.. . .+.+..|+ . +..+.. +-...++++.++. .
T Consensus 61 ~~l~GsGT~a~Eaa~~nl--~~~~g~~vLv~g-~FG~r~~~eia~~~g~-~~v~~l~~--~~g~~~~~~~ve~------~ 128 (374)
T TIGR01365 61 GIVPASDTGAVEMALWSM--LGCRGVDVLAWE-SFGKGWVTDVTKQLKL-PDVRVLEA--EYGKLPDLKKVDF------K 128 (374)
T ss_pred EEECCchHHHHHHHHHHc--CCCCCCeEEEEC-HHHHHHHHHHHHhcCC-CCcEEEcC--CCCCCCCHHHcCC------C
Confidence 467888999999887755 5 4799999877 78776 4 67777888 4 455432 2223457666641 1
Q ss_pred CcEEEEcccCCCC--cHH--HHHHHhhc-CeEEEeeC
Q psy6266 156 NSVIILHACAHNP--TAQ--QVAHMVDK-HHVYLLRS 187 (218)
Q Consensus 156 ~~~iil~~~p~NP--TG~--~l~~l~~~-~~i~ii~D 187 (218)
+.+.+. ||= ||. .+.+++++ ++..+|.|
T Consensus 129 ~~v~~v----hnETSTGv~npv~~i~~~~~~~lliVD 161 (374)
T TIGR01365 129 NDVVFT----WNGTTSGVRVPNGDFIPADREGLTICD 161 (374)
T ss_pred CCEEEe----cCCCchheeccccccccccCCCcEEEE
Confidence 233333 554 444 45555554 58889998
No 376
>PLN02452 phosphoserine transaminase
Probab=84.65 E-value=21 Score=31.57 Aligned_cols=101 Identities=7% Similarity=-0.092 Sum_probs=51.4
Q ss_pred EEEeccChhHHHHHHHHHHHhcCCCeEEecC-CCchhHH-HHHHHhCCCcceeEec-cCCcCccccHHHHHHHHhcCCCC
Q psy6266 80 GVQTLSGTGALRVGAEFLHRILNYTTFYYSK-PTWENHR-LVFLNAGFTEAREYRY-WNPEKRAVDFTGMYEDLVNAPDN 156 (218)
Q Consensus 80 ~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~-P~y~~y~-~~~~~~g~~~~~~~~~-~~~~~~~~d~~~~~~~l~~~~~~ 156 (218)
.+.+-||+.++..+..-+ +.+||++++.. =.|+... .+++..|. ..+.... +.....-++++.+ +..+..
T Consensus 74 ~~l~Gsgt~~~ea~~~nl--~~~~~~~l~~~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 146 (365)
T PLN02452 74 LFLQGGASTQFAAIPLNL--CKPGDKADFVVTGSWSKKAAKEAKKYCK-TNVIASGKDEKYTKIPSVSEW----ELTPDA 146 (365)
T ss_pred EEEeCccHHHHHHHHHhc--CCCCCeEEEEECCHHHHHHHHHHHHhCC-CcEEEecCCCCCCCCCChHHc----CCCCCC
Confidence 457788899988877655 56888776665 3455433 35666676 4444322 1111112355443 222223
Q ss_pred cEEEEcccCCCCcHHHHHHHhhcCeEEEeeCC
Q psy6266 157 SVIILHACAHNPTAQQVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 157 ~~iil~~~p~NPTG~~l~~l~~~~~i~ii~D~ 188 (218)
+.+.+ ....-.||.++..+-+-.++.++.|+
T Consensus 147 ~~v~~-~hnETstGv~~~~~~~i~~~~lvVDa 177 (365)
T PLN02452 147 KFVHI-CANETIHGVEFKDYPDVGNVPLVADM 177 (365)
T ss_pred cEEEE-CCCCCCCcEecCcccccCCCeEEEEC
Confidence 34333 21233556553333221247888983
No 377
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=84.04 E-value=10 Score=33.55 Aligned_cols=99 Identities=7% Similarity=-0.057 Sum_probs=52.0
Q ss_pred ceEEEEeccChhHHHHHHHHHHHhcCCCeE--EecCCCchhHHH-HHHHhCCCcceeEec-cCCc-CccccHHHHHHHHh
Q psy6266 77 RAFGVQTLSGTGALRVGAEFLHRILNYTTF--YYSKPTWENHRL-VFLNAGFTEAREYRY-WNPE-KRAVDFTGMYEDLV 151 (218)
Q Consensus 77 ~v~~~~t~G~~~al~~~~~~l~~l~~gd~V--~i~~P~y~~y~~-~~~~~g~~~~~~~~~-~~~~-~~~~d~~~~~~~l~ 151 (218)
+| .+.+.||++++..+..-+ +.+||.+ ++..=.|+.... ..+..| ++..... +..+ ..-++.+. ++
T Consensus 69 ~V-lfl~GggT~~~ea~~~Nl--l~~g~~~~~~~~tG~fg~r~~~ea~~~g--~v~~~~~~~~~~~~~~p~~~~----~~ 139 (364)
T PRK12462 69 GV-VFLQGGSSLQFSMIPMNF--SRPGAAAPEYVTTGYWSRKAIGEASRVA--AMRVVWDGAASGYRTLPSLAE----LD 139 (364)
T ss_pred eE-EEEeccHHHHHHHHHHHc--CCCCCcEEEEEeCCHHHHHHHHHHHhcC--CceEecCcCCCCCCcCCCHHH----hc
Confidence 44 356677999998877644 6789955 577778887553 334444 3333311 1100 01123333 32
Q ss_pred cCCCCcEEEEcccCCCC--cHHHHHHHhhcCeEEEeeC
Q psy6266 152 NAPDNSVIILHACAHNP--TAQQVAHMVDKHHVYLLRS 187 (218)
Q Consensus 152 ~~~~~~~iil~~~p~NP--TG~~l~~l~~~~~i~ii~D 187 (218)
..+..+.+.+ +||= ||.+.-++.+.++..+|.|
T Consensus 140 ~~~d~~~v~~---t~NETstGv~~~~~~~~~~~llvvD 174 (364)
T PRK12462 140 WDARAPFRHY---VSNETVEGLQFPDAAGLPDSPLIAD 174 (364)
T ss_pred cCCCCcEEEE---ccCCCCceEecCcccccCCCeEEEE
Confidence 2112233222 3554 4545445555678899999
No 378
>KOG1404|consensus
Probab=83.49 E-value=33 Score=30.75 Aligned_cols=179 Identities=13% Similarity=0.077 Sum_probs=91.1
Q ss_pred CCCCCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCC-CCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEE
Q psy6266 2 YMSSGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDS-LNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFG 80 (218)
Q Consensus 2 ~~~~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~ 80 (218)
|-.+|...+|+.-|...-.-| ..-|.|.+|+.+-...-. ....|.. .=+.+|-+++++++=+ . + . + +
T Consensus 45 yDe~G~ryLD~f~Gi~tvslG--HchP~v~~a~~kQl~~l~H~t~~~~~-~pi~~~Ae~L~s~~P~-~----l--~-~-v 112 (442)
T KOG1404|consen 45 YDEEGRRYLDAFGGIVTVSLG--HCHPDVVAAAVKQLKKLYHTTSGYLN-PPIHDLAEALVSKLPG-D----L--K-V-V 112 (442)
T ss_pred EcCCCceeehhhCCeEEEEcC--CCChHHHHHHHHhhhhhEEeeccccC-CcHHHHHHHHHHhCCC-C----c--e-E-E
Confidence 667888888888887665555 334555555443222100 1223433 2356777777776632 1 1 1 2 4
Q ss_pred EEeccChhHHHHHHHHHHHhcCCCeEEecCCCchh-HHHHHHHhCCCcceeEecc-------------------CCcCcc
Q psy6266 81 VQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWEN-HRLVFLNAGFTEAREYRYW-------------------NPEKRA 140 (218)
Q Consensus 81 ~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~-y~~~~~~~g~~~~~~~~~~-------------------~~~~~~ 140 (218)
.-+.+|++|-.+++++.+....--.++...-+|-. -...+.+.++ .+...++. ..+..+
T Consensus 113 fF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~-~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~ 191 (442)
T KOG1404|consen 113 FFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGL-SPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEE 191 (442)
T ss_pred EEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccC-CcccccCCCCCCcccccCCCCcccccCCCCchh
Confidence 68899999999988765432222344444445433 3323333333 33332221 000000
Q ss_pred ccHHHHHHHHhc----CCCCcEEEEcc--------cCCCCcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 141 VDFTGMYEDLVN----APDNSVIILHA--------CAHNPTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 141 ~d~~~~~~~l~~----~~~~~~iil~~--------~p~NPTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
-.-+...+.+++ ..+.++.-++. .-.=|-|. +..+++++++...|.| |+-.||
T Consensus 192 e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaD--EVqtGf 258 (442)
T KOG1404|consen 192 EASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIAD--EVQTGF 258 (442)
T ss_pred hhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEeh--hhhhcc
Confidence 012222333322 12333221111 11224455 7889999999999999 887765
No 379
>KOG0628|consensus
Probab=82.79 E-value=2.4 Score=38.45 Aligned_cols=86 Identities=10% Similarity=0.095 Sum_probs=58.5
Q ss_pred eEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC-CCC--cEEEEcc-cCCCCcHH----HHHHH
Q psy6266 105 TFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA-PDN--SVIILHA-CAHNPTAQ----QVAHM 176 (218)
Q Consensus 105 ~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~--~~iil~~-~p~NPTG~----~l~~l 176 (218)
.++..+-+-.+-.......|. +.+.++.. + .++++-+.+++++++. .++ +++++-+ --.|+++. +|..+
T Consensus 184 V~Y~SDqahssveka~~i~~V-klR~l~td-~-n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~V 260 (511)
T KOG0628|consen 184 VAYCSDQAHSSVEKACLIAGV-KLRALPTD-E-NFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPV 260 (511)
T ss_pred eEEecCcccchHHHhHhhcce-eEEEeecc-c-CcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcch
Confidence 356667777776666666666 67777663 2 6889999999998753 111 3434322 22344443 68888
Q ss_pred hhcCeEEEeeCCceeeccC
Q psy6266 177 VDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 177 ~~~~~i~ii~D~r~~y~~l 195 (218)
|+++++|+-.| .+|+|=
T Consensus 261 c~~~glWLHVD--AAYAGs 277 (511)
T KOG0628|consen 261 CREEGLWLHVD--AAYAGS 277 (511)
T ss_pred hhhcCEEEEee--hhhccc
Confidence 99999999999 999974
No 380
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=81.60 E-value=21 Score=32.26 Aligned_cols=148 Identities=14% Similarity=0.107 Sum_probs=74.2
Q ss_pred eeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCC-----CCc----HHHHHHHHHHhcCCCCCCCcCCCceEEEE
Q psy6266 12 EIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPV-----LGL----ESFSSAATRMLLGGDASPPLREGRAFGVQ 82 (218)
Q Consensus 12 l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~-----~G~----~~lr~aia~~~~~~~~~~~~~~~~v~~~~ 82 (218)
+|.|.| +..+|+.|.+ .+++.++.-+.|+|. +|. -+|...++++. | -+ +. +- -.
T Consensus 80 iG~GyY-----~~~~P~vI~r---nile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLT-G-m~---VA--NA--Sm 142 (450)
T COG0403 80 IGAGYY-----DTYTPPVILR---NILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLT-G-LD---VA--NA--SM 142 (450)
T ss_pred ccCccc-----CCcCcHHHHH---HhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHHh-C-CC---cc--cc--hh
Confidence 567766 2356777763 445445566789984 453 33444444433 2 11 10 00 02
Q ss_pred eccChhHHHHHHHHHHHhcC--CCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEE
Q psy6266 83 TLSGTGALRVGAEFLHRILN--YTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVII 160 (218)
Q Consensus 83 t~G~~~al~~~~~~l~~l~~--gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~ii 160 (218)
--++|.+-...+++. .+.. .++++++.-++|.+...++.. + ++..+..-..+ ..|.+.+++. .. ....-++
T Consensus 143 ~DeaTAaAEAm~ma~-r~~k~k~~~~~V~~~vhpqt~~Vl~Tr-a-~~~g~~i~~~~--~~d~~~l~~~-~~-~~~~gv~ 215 (450)
T COG0403 143 LDEATAAAEAMLMAK-RVTKKKRNKFLVPKDVHPQTLDVLRTR-A-EGLGIEIEVVD--ADDLDDLESA-DD-GDVFGVL 215 (450)
T ss_pred hhhHHHHHHHHHHHH-HhhcCcCceEEecCCCCHHHHHHHHhh-c-ccCceEEEEec--cchhhhhhhc-cc-cCeEEEE
Confidence 234444444433332 2333 689999999999999887654 2 33222110000 1144555443 21 1223445
Q ss_pred EcccCCCCcHH------HHHHHhhcCeEEEe
Q psy6266 161 LHACAHNPTAQ------QVAHMVDKHHVYLL 185 (218)
Q Consensus 161 l~~~p~NPTG~------~l~~l~~~~~i~ii 185 (218)
++ +| |-.|. .+.+.+++++..++
T Consensus 216 vQ-yP-~~~G~~~~d~~~l~~~~h~~~al~~ 244 (450)
T COG0403 216 VQ-YP-NTFGIVEEDLRALIEAAHSAGALVI 244 (450)
T ss_pred Ee-cC-CCCCccchhHHHHHHHHhhcCCEEE
Confidence 54 34 35562 67777777764443
No 381
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=80.32 E-value=5.3 Score=36.12 Aligned_cols=86 Identities=12% Similarity=0.132 Sum_probs=47.4
Q ss_pred ccChhHHHHHHHHHHHhcCC--CeEEecCCCchhHHHHHHH----hCCCcceeEeccCCcCccccHHHHHHHHhcCCCCc
Q psy6266 84 LSGTGALRVGAEFLHRILNY--TTFYYSKPTWENHRLVFLN----AGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNS 157 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~g--d~V~i~~P~y~~y~~~~~~----~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~ 157 (218)
.|++.+...+.++.+ .... ++|+++.-..|.+...++. .|. +++.++.. + ....| . +..
T Consensus 134 d~atA~aEa~~ma~r-~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~-~iv~~~~~-~-~~~~d---------~--~~~ 198 (429)
T PF02347_consen 134 DGATAAAEAMLMAVR-ATKRKRNKVLVPESLHPQTRAVLRTYAAPLGI-EIVEVPLD-E-DGTTD---------D--DDT 198 (429)
T ss_dssp SCCHHHHHHHHHHHH-HHTT---EEEEETTS-CHHHHHHHHHCCHCCE-EEEEE-BB-T-TCSB----------S--TTE
T ss_pred ChhHHHHHHHHHHHH-hcccCCcEEEEcCCcChhhHHHHHHhhhhCCe-EEEEeccc-c-cCCcc---------c--cCe
Confidence 466655554444443 2333 5999999999999986554 566 67777653 2 12223 1 233
Q ss_pred -EEEEcccCCCCcHH-----HHHHHhhcCeEEEee
Q psy6266 158 -VIILHACAHNPTAQ-----QVAHMVDKHHVYLLR 186 (218)
Q Consensus 158 -~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~ 186 (218)
.++++ +|+. .|. ++.+++++++..++.
T Consensus 199 a~v~vq-~Pn~-~G~~ed~~~i~~~~h~~gal~~~ 231 (429)
T PF02347_consen 199 AAVMVQ-NPNT-FGVFEDIKEIADIAHAAGALVIV 231 (429)
T ss_dssp EEEEEE-SS-T-TSB--THHHHHHHHHHTT-EEEE
T ss_pred EEEEee-cCCC-CceEeeHHHHHHHHHHcCCEEEE
Confidence 34443 4543 353 788999888765554
No 382
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=78.66 E-value=57 Score=32.17 Aligned_cols=22 Identities=9% Similarity=0.217 Sum_probs=21.0
Q ss_pred HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 172 QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
.+.++|++|++.+|.| |++.||
T Consensus 610 ~lr~lc~~~gilLI~D--EV~TGf 631 (817)
T PLN02974 610 ALVQVCRSRKIPVIFD--EVFTGL 631 (817)
T ss_pred HHHHHHHHhCCEEEEe--ecccCC
Confidence 7999999999999999 999987
No 383
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=77.93 E-value=2.2 Score=37.61 Aligned_cols=39 Identities=44% Similarity=0.658 Sum_probs=35.6
Q ss_pred HHHHHhhcCeEEEeeCCceeeccCCCCCHHHHHHHHHHH
Q psy6266 172 QVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDA 210 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D~r~~y~~l~~~ni~~~~~a~~~~ 210 (218)
.+.+++++++|+++..||++|+++...+|++.+++|+++
T Consensus 357 ~~~~l~~~~~V~~~p~~ri~~~~~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 357 QVDRLREEFGVYAVGSGRINVAGLNESNIDYVAEAIAAV 395 (396)
T ss_pred HHHHHHHcCCEEEcCCCeEEEeeCCHHHHHHHHHHHHhh
Confidence 567888999999999999999999999999999999876
No 384
>PTZ00376 aspartate aminotransferase; Provisional
Probab=75.34 E-value=4.4 Score=35.89 Aligned_cols=42 Identities=52% Similarity=0.897 Sum_probs=36.9
Q ss_pred HHHHHhhcCeEEEeeCCceeeccCCCCCHHHHHHHHHHHHHc
Q psy6266 172 QVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDAVTS 213 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D~r~~y~~l~~~ni~~~~~a~~~~~~~ 213 (218)
....|.++++|+++.-||++++.+...++++++.+|++++.+
T Consensus 362 ~~~~L~~~~~v~v~p~~Ris~~~~~~~~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 362 QVERLIEKYHIYLLDNGRISVAGLTSKNVDYVAEAIHDVVRN 403 (404)
T ss_pred HHHHHHHhCCEeecCCCeEEEeccCHHhHHHHHHHHHHHHhc
Confidence 345677888999999899999889999999999999999875
No 385
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=74.00 E-value=16 Score=31.99 Aligned_cols=123 Identities=13% Similarity=0.072 Sum_probs=67.1
Q ss_pred CcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHH-HHHHhcCCCeEEecCCC-chhHH----HHHHHhCC
Q psy6266 52 GLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAE-FLHRILNYTTFYYSKPT-WENHR----LVFLNAGF 125 (218)
Q Consensus 52 G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~-~l~~l~~gd~V~i~~P~-y~~y~----~~~~~~g~ 125 (218)
..-.+-+.+.+++.. --+ -.+.++ +++-+.+--++-.+. +++ ..+|+.|++++-. ||+-. ...+..+.
T Consensus 73 ~W~~lp~~lgdklAp-LiG--A~~~Ev--vv~dtts~nl~k~L~aalr-~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~ 146 (407)
T COG3844 73 DWFDLPERLGDKLAP-LIG--ARAGEV--VVTDTTSINLFKVLAAALR-PQEGRRVIVSEGDNFPTDLYIAEGLADLLGI 146 (407)
T ss_pred chhhchhHHHHHhhh-hhc--CCCCce--EEeCCcchHHHHHHHHHhc-cCCCceEEeecCCCCCcchhhhcchhhhhcc
Confidence 334444555555532 111 233444 355555544443333 332 4569999998643 44322 23333332
Q ss_pred CcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 126 TEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 126 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
. +.. ...+....+.+.+. ....+++.+.-+--||. .|.+++.+|+++++.| .+-+
T Consensus 147 -~---~~~----~~~~~P~~~~~~~~---dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wD--LAHs 206 (407)
T COG3844 147 -G---YDL----EGVIAPRALEEAIT---DDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWD--LAHS 206 (407)
T ss_pred -c---ccc----eeeeChHHHHHhhc---cceEEEEeccccccccceeeHHHHHHHHHhcCceEEee--hhcc
Confidence 1 111 11235556666664 33455555666778998 7889999999999999 6643
No 386
>PLN02672 methionine S-methyltransferase
Probab=66.12 E-value=68 Score=32.69 Aligned_cols=132 Identities=13% Similarity=0.059 Sum_probs=74.0
Q ss_pred CCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHH----HHHhcCCCeEEecCCCchhHHH
Q psy6266 43 LNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEF----LHRILNYTTFYYSKPTWENHRL 118 (218)
Q Consensus 43 ~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~----l~~l~~gd~V~i~~P~y~~y~~ 118 (218)
....|.|..|...||..|+.++.. -++..+.+++| ++-+.-..|+..++++ +..++.+.+.++| +.|-.-.
T Consensus 418 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~- 492 (1082)
T PLN02672 418 SYFPCEPPAGSKRFRNLIAGFMRI-YHHIPLTPDNV--VVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP-KKWLTSL- 492 (1082)
T ss_pred CCCCCCCCccchHHHHHHHHHHHH-hcCCcCCccce--EEeccHHHHHHHHHHhhChHHHhhhhhhhccCC-HHHHhHh-
Confidence 456788999999999999999976 55666888876 4667766666544442 3334555555554 3454322
Q ss_pred HHHHhCCC------cceeEeccCCcCccccHHHHHHHHhcCCCCcEEEE-cccCCCCcHH---HHHHHhhcCeEEEeeC
Q psy6266 119 VFLNAGFT------EAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIIL-HACAHNPTAQ---QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 119 ~~~~~g~~------~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil-~~~p~NPTG~---~l~~l~~~~~i~ii~D 187 (218)
...|.. ..+.+ .+... .-+.+.+.|++..+ .+++. ..-+---|-. .|.+.+++.+.+++-|
T Consensus 493 --~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (1082)
T PLN02672 493 --AIENATSDSKSDDVITV--IEAPR---QSDLVIELIKKLKP-QVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLD 563 (1082)
T ss_pred --hhhcccccCccCCeEEE--EeCCC---cchHHHHHHHhCCC-eEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEe
Confidence 222210 11111 11100 12356666665433 33332 1112222222 6777888999999988
No 387
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=65.13 E-value=44 Score=23.23 Aligned_cols=85 Identities=8% Similarity=0.060 Sum_probs=50.9
Q ss_pred CCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-HHHHHhhcCeEEEeeCCc
Q psy6266 111 PTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-QVAHMVDKHHVYLLRSGR 189 (218)
Q Consensus 111 P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-~l~~l~~~~~i~ii~D~r 189 (218)
..+..|...++..|+ +...+ - ......-.-..+...+.+ .+.+++...+.+-.-. .+.+.|+++++.++.-
T Consensus 10 ~~~~~~~~~~~~~G~-~~~~h-g-~~~~~~~~~~~l~~~i~~---aD~VIv~t~~vsH~~~~~vk~~akk~~ip~~~~-- 81 (97)
T PF10087_consen 10 DRERRYKRILEKYGG-KLIHH-G-RDGGDEKKASRLPSKIKK---ADLVIVFTDYVSHNAMWKVKKAAKKYGIPIIYS-- 81 (97)
T ss_pred ccHHHHHHHHHHcCC-EEEEE-e-cCCCCccchhHHHHhcCC---CCEEEEEeCCcChHHHHHHHHHHHHcCCcEEEE--
Confidence 556778889999999 77666 1 122112222336666643 3565555444444333 7889999999877763
Q ss_pred eeeccCCCCCHHHHHHHHHH
Q psy6266 190 INMCGLTTQNLDHVAQAIHD 209 (218)
Q Consensus 190 ~~y~~l~~~ni~~~~~a~~~ 209 (218)
...++..+.+++.+
T Consensus 82 ------~~~~~~~l~~~l~~ 95 (97)
T PF10087_consen 82 ------RSRGVSSLERALER 95 (97)
T ss_pred ------CCCCHHHHHHHHHh
Confidence 33455666666554
No 388
>KOG1359|consensus
Probab=65.02 E-value=45 Score=28.93 Aligned_cols=160 Identities=13% Similarity=0.064 Sum_probs=75.9
Q ss_pred CceeeeeeeEEeCCCCCccCchHHHHHHHHHhhc-CCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEecc
Q psy6266 7 EIHCCEIRNAYRTEECKPWVLPVVRQAEKELAAD-DSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLS 85 (218)
Q Consensus 7 ~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G 85 (218)
..++|++--.|- | ...-|.|.+|.++++++ ..+...-.-+.|....-+.+-.++.. .++ .++ +++.+.
T Consensus 67 k~ilnFcaNnYL---G-LsshPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAq-fh~---rED---~ilyps 135 (417)
T KOG1359|consen 67 KKILNFCANNYL---G-LSSHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQ-FHG---RED---TILYPS 135 (417)
T ss_pred cceeeecccccc---c-ccCChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHH-HhC---CCc---eEEecc
Confidence 467788777663 3 34456666666666654 11112222245554443333333311 110 112 234444
Q ss_pred ChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC-CCCcEEEEccc
Q psy6266 86 GTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA-PDNSVIILHAC 164 (218)
Q Consensus 86 ~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~iil~~~ 164 (218)
+-.|-.-++.++ ++|-|.|+..+- ||.+++.-..+++ . + ...|+-.++..+.++ .-+.+++.-..
T Consensus 136 cfdANag~feai--l~pedAvfSDeL---NhASIIdGirLck--r--y-----~h~dv~~l~~~l~~a~k~r~klv~TDg 201 (417)
T KOG1359|consen 136 CFDANAGAFEAI--LTPEDAVFSDEL---NHASIIDGIRLCK--R--Y-----RHVDVFDLEHCLISACKMRLKLVVTDG 201 (417)
T ss_pred ccccchHHHHHh--cChhhhhhcccc---ccchhhhhhHHHh--h--h-----ccchhHHHHHHHHHhhhheEEEEEecc
Confidence 444444455555 567777766544 3445544332211 1 1 123444455444432 12233333211
Q ss_pred CCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 165 AHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 165 p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
--.=-|- +|.+|+++|+..++-| ++-.
T Consensus 202 ~FSMDGdiaPl~ei~~La~kYgaLlfiD--ecHa 233 (417)
T KOG1359|consen 202 VFSMDGDIAPLEEISQLAKKYGALLFID--ECHA 233 (417)
T ss_pred eeccCCCcccHHHHHHHHHhcCcEEEEe--eccc
Confidence 1111121 7899999999999999 5543
No 389
>KOG0629|consensus
Probab=64.93 E-value=27 Score=31.64 Aligned_cols=63 Identities=13% Similarity=0.220 Sum_probs=39.1
Q ss_pred cceeEeccCCcCccccHHHHHHHHhcCCCC---cEEEEcccC-CCCcHH-----HHHHHhhcCeEEEeeCCceeecc
Q psy6266 127 EAREYRYWNPEKRAVDFTGMYEDLVNAPDN---SVIILHACA-HNPTAQ-----QVAHMVDKHHVYLLRSGRINMCG 194 (218)
Q Consensus 127 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~---~~iil~~~p-~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~~ 194 (218)
.++.+++ .+...++.+.+++.|-+...+ ++ +++.+. .-=-|+ .|+++|++|++|+-.| .++.|
T Consensus 223 ~c~~v~t--~e~Gkm~~~dLe~kile~k~kg~~Pf-~vnaTaGTTV~GAFDdL~~iadiC~k~~lWmHvD--AAwGG 294 (510)
T KOG0629|consen 223 HCIKVKT--DERGKMIPDDLEKKILEAKAKGGVPF-FVNATAGTTVLGAFDDLNGIADICEKHKLWMHVD--AAWGG 294 (510)
T ss_pred eeEEecc--cccCccchHHHHHHHHHHHhcCCCCe-EEEecCCceeeeccCcHHHHHHHHHhcCEEEEee--ccccc
Confidence 4555655 334677888888877654222 34 332221 111122 6899999999999999 77665
No 390
>KOG2040|consensus
Probab=62.71 E-value=78 Score=30.54 Aligned_cols=135 Identities=12% Similarity=0.133 Sum_probs=81.0
Q ss_pred CccCcCC---CCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHH-hc-CC----CeEEecCCCch
Q psy6266 44 NHEYLPV---LGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHR-IL-NY----TTFYYSKPTWE 114 (218)
Q Consensus 44 ~~~Y~~~---~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~-l~-~g----d~V~i~~P~y~ 114 (218)
-|.|.|. +|..++-..+-+++-. -.+ -+++ +++-..|.++-+..+..++. ++ .| ...++|-...+
T Consensus 568 IHPF~P~eQaqGY~~lf~~Le~~Lc~-iTG----~D~~-s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHG 641 (1001)
T KOG2040|consen 568 IHPFAPVEQAQGYQQLFTELEKDLCE-ITG----FDSF-SLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHG 641 (1001)
T ss_pred CCCCCchHHHhhHHHHHHHHHHHhhe-eec----ccce-eecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccC
Confidence 4667775 4555555555444432 111 1333 35555555544444444333 21 23 45677888888
Q ss_pred hHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH------HHHHHhhcCeEEEeeCC
Q psy6266 115 NHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ------QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 115 ~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~------~l~~l~~~~~i~ii~D~ 188 (218)
.-.....++|. +++.+.+.. ...+|+..+++.-++....-..+++.+|+- -|. .+.++..+|+--+.-||
T Consensus 642 TNPASA~Magm-kvvpV~~~~--~G~id~~dLk~kaekh~~~Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVYlDG 717 (1001)
T KOG2040|consen 642 TNPASAAMAGM-KVVPVGCDA--NGNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVYLDG 717 (1001)
T ss_pred CChhhHHhcCC-EEEEeeccC--CCCccHHHHHHHHHHhhhhhheeEEecccc-cccccccHHHHHHHHHhcCCEEEecC
Confidence 88888999999 999998742 457899999887766422222233333322 132 67788889998888898
No 391
>COG1377 FlhB Flagellar biosynthesis pathway, component FlhB [Cell motility and secretion / Intracellular trafficking and secretion]
Probab=61.40 E-value=13 Score=32.89 Aligned_cols=17 Identities=6% Similarity=0.366 Sum_probs=15.5
Q ss_pred HHHHHhhcCeEEEeeCC
Q psy6266 172 QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D~ 188 (218)
.|.++|+||+|.+++|-
T Consensus 300 kIreiA~e~~Ipi~enp 316 (363)
T COG1377 300 KIREIAKEHGIPIIENP 316 (363)
T ss_pred HHHHHHHHcCCceecCh
Confidence 58899999999999994
No 392
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=61.02 E-value=1.1e+02 Score=27.37 Aligned_cols=109 Identities=14% Similarity=0.140 Sum_probs=55.0
Q ss_pred CceEEEEeccChhHHHHHHHHHH-------HhcCCCeEEecCCCchhHH-----HH----HHHhCCCcceeEeccCCcCc
Q psy6266 76 GRAFGVQTLSGTGALRVGAEFLH-------RILNYTTFYYSKPTWENHR-----LV----FLNAGFTEAREYRYWNPEKR 139 (218)
Q Consensus 76 ~~v~~~~t~G~~~al~~~~~~l~-------~l~~gd~V~i~~P~y~~y~-----~~----~~~~g~~~~~~~~~~~~~~~ 139 (218)
+++ +++++|++|.....+.-+. .+.+||.|++..|.||.+. .. +...|+ ++.. ... . ..
T Consensus 286 ~~~-vii~tg~~g~~~~~l~~~~~~~~~~i~l~~~d~vi~s~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~-~~h-~-Sg 360 (422)
T TIGR00649 286 ENY-LIITTGSQGEPYAALTRIANNEHEQIRIRKGDTVVFSAPPIPGNENIAVSILLDIRLNEVGA-RVIK-RIH-V-SG 360 (422)
T ss_pred ccE-EEEEeCCCCcHHHHHHHHhCCCCCcEEeCCCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCC-EEEe-ceE-e-cC
Confidence 344 4677777775533322111 0136799999999999887 11 223455 4422 111 1 12
Q ss_pred cccHHHHHHHHhcCCCCcEEEEcccCCCCcHHHHHHHhhcC-----eEEEeeCCcee
Q psy6266 140 AVDFTGMYEDLVNAPDNSVIILHACAHNPTAQQVAHMVDKH-----HVYLLRSGRIN 191 (218)
Q Consensus 140 ~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~~l~~l~~~~-----~i~ii~D~r~~ 191 (218)
.-+.+.++..++...|+.++-++.-+ +.=.+.++++++. +++++..|...
T Consensus 361 Ha~~~dl~~~i~~~~Pk~~ipvHge~--~~~~~~~~~a~~~g~~~~~~~~~~nG~~~ 415 (422)
T TIGR00649 361 HASQEDHKLLLRLLKPKYIIPVHGEY--RMLINHTKLAEEEGYPGENIFILRNGDVL 415 (422)
T ss_pred CCCHHHHHHHHHHhCCCEEEecCCcH--HHHHHHHHHHHHcCCCcccEEEecCCcEE
Confidence 23445555545433455554444211 1011455666544 57888877443
No 393
>KOG1360|consensus
Probab=60.46 E-value=1.3e+02 Score=27.27 Aligned_cols=76 Identities=12% Similarity=0.190 Sum_probs=47.4
Q ss_pred cCCCeEEecCCCchhHHHHHHH---hCCCcceeEeccCCcCccccHHHHHHHHhcCC-CCcEEEEcccCCCCcHH-----
Q psy6266 101 LNYTTFYYSKPTWENHRLVFLN---AGFTEAREYRYWNPEKRAVDFTGMYEDLVNAP-DNSVIILHACAHNPTAQ----- 171 (218)
Q Consensus 101 ~~gd~V~i~~P~y~~y~~~~~~---~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~~~~iil~~~p~NPTG~----- 171 (218)
-||-+++.-. .||.+++.- .+. ++.+ +. ..|++.+++.|++.+ ..++++-.-+-|.=+|.
T Consensus 255 lpgcei~SD~---gNHASMI~GIrns~v--~K~I--Fr----HND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcple 323 (570)
T KOG1360|consen 255 LPGCEIFSDE---GNHASMIQGIRNSRV--PKHI--FR----HNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLE 323 (570)
T ss_pred CCCcEEeccc---cchHHHHHHhhhcCC--ccee--ec----cCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHH
Confidence 4776665544 356665543 232 2222 22 237888888887652 23455544566777886
Q ss_pred HHHHHhhcCeEEEeeC
Q psy6266 172 QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D 187 (218)
+|.+++.+|+..-+-|
T Consensus 324 elcDvah~yGAiTFlD 339 (570)
T KOG1360|consen 324 ELCDVAHKYGAITFLD 339 (570)
T ss_pred HHHHHHHHhCceeeee
Confidence 7889999999888888
No 394
>PF13684 Dak1_2: Dihydroxyacetone kinase family
Probab=57.11 E-value=56 Score=28.22 Aligned_cols=67 Identities=12% Similarity=0.142 Sum_probs=39.1
Q ss_pred HHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH--HHHHHhhcCeEEEeeCC
Q psy6266 117 RLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ--QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 117 ~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~--~l~~l~~~~~i~ii~D~ 188 (218)
..+|+..|+ ..+. +- ..+..+..+.+.+++++...+.+ ++.++-.|.+.. |.+++++++.+.+|.-.
T Consensus 109 ~~lf~~~Gv-~~vi-~g--gqt~nPS~~dl~~Ai~~~~a~~V-ivLPNn~ni~~aa~qa~~~~~~~~v~VipTk 177 (313)
T PF13684_consen 109 AELFRSLGV-DVVI-SG--GQTMNPSTEDLLNAIEKVGADEV-IVLPNNKNIILAAEQAARLSEDKNVVVIPTK 177 (313)
T ss_pred HHHHHhCCC-eEEE-eC--CCCCCCCHHHHHHHHHhCCCCeE-EEEeCCchHHHHHHHHHHHhcCCCEEEEecC
Confidence 466777776 3322 11 11234466777777876533344 444555666665 77788766678888764
No 395
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=56.65 E-value=62 Score=27.88 Aligned_cols=56 Identities=23% Similarity=0.150 Sum_probs=33.0
Q ss_pred cCCCceEEEEeccChh-HHHHHHHHHHHhcCCCeEEecCCC-chhHHHHHHHhCCCcceeEec
Q psy6266 73 LREGRAFGVQTLSGTG-ALRVGAEFLHRILNYTTFYYSKPT-WENHRLVFLNAGFTEAREYRY 133 (218)
Q Consensus 73 ~~~~~v~~~~t~G~~~-al~~~~~~l~~l~~gd~V~i~~P~-y~~y~~~~~~~g~~~~~~~~~ 133 (218)
+.+....+.-|.|.+| |+..+..++ .-+-+++-+.. =.....+++..|+ +++..|-
T Consensus 59 l~pG~tIVE~TSGNTGI~LA~vaa~~----Gy~~iivmP~~~S~er~~~l~a~GA-evi~t~~ 116 (300)
T COG0031 59 LKPGGTIVEATSGNTGIALAMVAAAK----GYRLIIVMPETMSQERRKLLRALGA-EVILTPG 116 (300)
T ss_pred CCCCCEEEEcCCChHHHHHHHHHHHc----CCcEEEEeCCCCCHHHHHHHHHcCC-EEEEcCC
Confidence 5555554566777665 344433322 22444444444 4446679999999 8988865
No 396
>PRK13109 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=55.82 E-value=17 Score=32.08 Aligned_cols=16 Identities=0% Similarity=0.339 Sum_probs=15.1
Q ss_pred HHHHHhhcCeEEEeeC
Q psy6266 172 QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D 187 (218)
+|.++|++|+|.+++|
T Consensus 302 ~Ir~~A~e~~VPiven 317 (358)
T PRK13109 302 KIREIAEENGIPVIED 317 (358)
T ss_pred HHHHHHHHcCCCEEeC
Confidence 6889999999999999
No 397
>KOG3843|consensus
Probab=55.37 E-value=1.3e+02 Score=25.69 Aligned_cols=108 Identities=12% Similarity=0.090 Sum_probs=59.3
Q ss_pred EEeccChh-HHHHHHHHHHHhcC-CCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccc--cHHHHHHHHhcCCCC
Q psy6266 81 VQTLSGTG-ALRVGAEFLHRILN-YTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAV--DFTGMYEDLVNAPDN 156 (218)
Q Consensus 81 ~~t~G~~~-al~~~~~~l~~l~~-gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~--d~~~~~~~l~~~~~~ 156 (218)
++.+-++| .+.+.+..++.-.| ..-|+.+.----+....+-.+|+ +|+-+.-. .+..++ |++...+.+++..+
T Consensus 79 ~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agf-epiiie~i-~d~d~l~tdleav~~~iee~g~- 155 (432)
T KOG3843|consen 79 FVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGF-EPIIIENI-LDGDELITDLEAVEAIIEELGE- 155 (432)
T ss_pred eEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCC-Cceeeecc-ccchHHHHhHHHHHHHHHHhCC-
Confidence 45554444 45555555443334 34444443333333344456899 88776432 122233 78888777776533
Q ss_pred cEEEEc------ccCCCCcHH-HHHHHhhcCeEEEeeCCceeec
Q psy6266 157 SVIILH------ACAHNPTAQ-QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 157 ~~iil~------~~p~NPTG~-~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
..++.. +-|-.|--. +++.+|..|+|.-|.. -+|.
T Consensus 156 dcilci~sttscfapr~pd~leaiaaica~~diphivn--nayg 197 (432)
T KOG3843|consen 156 DCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVN--NAYG 197 (432)
T ss_pred ceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhc--cccc
Confidence 333332 122333333 7889999999998877 6664
No 398
>KOG2467|consensus
Probab=54.20 E-value=86 Score=28.08 Aligned_cols=126 Identities=14% Similarity=0.087 Sum_probs=69.7
Q ss_pred cHHHHHHHHHHhcCCCCCCCcCCCceEE-EEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHH---HH--HHhCCC
Q psy6266 53 LESFSSAATRMLLGGDASPPLREGRAFG-VQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRL---VF--LNAGFT 126 (218)
Q Consensus 53 ~~~lr~aia~~~~~~~~~~~~~~~~v~~-~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~---~~--~~~g~~ 126 (218)
++.|+|.-|-..|+ ++++...+ ++..+++-|-..+..++ +.|++++.=-+---+.|.. .. +..-+
T Consensus 87 iE~LCq~RALeaF~------ldp~kWGVNVQp~SGSPANfavYtal--l~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa- 157 (477)
T KOG2467|consen 87 IELLCQKRALEAFG------LDPEKWGVNVQPYSGSPANFAVYTAL--LKPHERIMGLDLPSGGHLSHGYQTPTKKISA- 157 (477)
T ss_pred HHHHHHHHHHHHhC------CCHHHCceeeccCCCCchhhHHHhhh--cCCCCeeeeccCCCCCccccccccCCceeee-
Confidence 34555555555566 55554432 46778888888888877 7799888755433333321 10 11111
Q ss_pred ccee---Eecc-CCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH---HHHHHhhcCeEEEeeCCcee
Q psy6266 127 EARE---YRYW-NPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ---QVAHMVDKHHVYLLRSGRIN 191 (218)
Q Consensus 127 ~~~~---~~~~-~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~---~l~~l~~~~~i~ii~D~r~~ 191 (218)
.-++ +||. ++++.-+|.+.+++.-..- ++++++...-.-|--. .+.++|.+-+.|++.| ++
T Consensus 158 ~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~f--rPk~iiaG~SaY~R~~DYaR~R~Iad~~gA~Lm~D--MA 225 (477)
T KOG2467|consen 158 TSIYFESMPYKVDPSTGYIDYDKLEKTATLF--RPKLIIAGTSAYSRLIDYARFRKIADKVGAYLMAD--MA 225 (477)
T ss_pred eeeecccCceeeCCCCCceehHHHHHHHHhc--CCcEEEeccccchhhccHHHHHHHHHhcCceeehh--hh
Confidence 1111 2221 2344456999988755432 3345553211111111 6788899999999999 65
No 399
>PRK06298 type III secretion system protein; Validated
Probab=53.94 E-value=19 Score=31.82 Aligned_cols=16 Identities=19% Similarity=0.312 Sum_probs=15.1
Q ss_pred HHHHHhhcCeEEEeeC
Q psy6266 172 QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D 187 (218)
+|.++|++|+|.+++|
T Consensus 294 ~Ir~iA~e~~VPiven 309 (356)
T PRK06298 294 RIIAEAEKYGVPIMRN 309 (356)
T ss_pred HHHHHHHHcCCCEEeC
Confidence 6889999999999999
No 400
>PRK12721 secretion system apparatus protein SsaU; Reviewed
Probab=53.55 E-value=19 Score=31.72 Aligned_cols=16 Identities=0% Similarity=0.376 Sum_probs=15.1
Q ss_pred HHHHHhhcCeEEEeeC
Q psy6266 172 QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D 187 (218)
+|.++|++|+|.+++|
T Consensus 293 ~Ir~iA~e~~VPiven 308 (349)
T PRK12721 293 HIVKLAERNGIPVVEN 308 (349)
T ss_pred HHHHHHHHcCCCEEeC
Confidence 6889999999999999
No 401
>TIGR01404 FlhB_rel_III type III secretion protein, YscU/HrpY family. This model represents one of several families of proteins related to bacterial flagellar biosynthesis proteins and involved in bacterial type III protein secretion systems. This family is homologous to, but distinguished from, flagellar biosynthetic protein FlhB (TIGRFAMs model TIGR00328). This model may not identify all type III secretion system FlhB homologs.
Probab=53.13 E-value=15 Score=32.19 Aligned_cols=16 Identities=13% Similarity=0.256 Sum_probs=15.2
Q ss_pred HHHHHhhcCeEEEeeC
Q psy6266 172 QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D 187 (218)
+|.++|++|+|.+++|
T Consensus 292 ~Ir~iA~e~~VPiven 307 (342)
T TIGR01404 292 AVRAYAEEAGIPVVRD 307 (342)
T ss_pred HHHHHHHHcCCCEeeC
Confidence 6889999999999999
No 402
>PRK12468 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=52.80 E-value=20 Score=31.99 Aligned_cols=16 Identities=19% Similarity=0.436 Sum_probs=15.2
Q ss_pred HHHHHhhcCeEEEeeC
Q psy6266 172 QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D 187 (218)
+|.++|++|+|.+++|
T Consensus 300 ~Ir~~A~e~~VPiven 315 (386)
T PRK12468 300 RIRELGAEHRIPLLEA 315 (386)
T ss_pred HHHHHHHHcCCcEEeC
Confidence 6889999999999999
No 403
>TIGR01319 glmL_fam conserved hypothetical protein. This small family includes, so far, an uncharacterized protein from E. coli O157:H7 and GlmL from Clostridium tetanomorphum and Clostridium cochlearium. GlmL is located between the genes for the two subunits, epsilon (GlmE) and sigma (GlmS), of the coenzyme-B12-dependent glutamate mutase (methylaspartate mutase), the first enzyme in a pathway of glutamate fermentation. Members shows significant sequence similarity to the hydantoinase branch of the hydantoinase/oxoprolinase family (pfam01968).
Probab=50.19 E-value=1.3e+02 Score=27.60 Aligned_cols=113 Identities=19% Similarity=0.196 Sum_probs=64.9
Q ss_pred EEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEE
Q psy6266 80 GVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVI 159 (218)
Q Consensus 80 ~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i 159 (218)
.+.|+++.|+|.++...+ +++=+=-........+|+ ++..+-.++. ..-+++. |.+. +.+++
T Consensus 63 ~~acSSAaGGLkmvv~Gl----------v~~~TaeAAk~AAlgAGA-~V~~~~a~~l--~~~~l~~----I~~~-~PDII 124 (463)
T TIGR01319 63 KKACSSAAGGLAMAAIGL----------VPEITAEAAKRAAHGAGA-KIANVYAYDL--NNKDIEA----IEES-NLDII 124 (463)
T ss_pred EEEEcccCCChheEEEec----------cchhhHHHHHHHHhcCCc-EEEEEEeecC--CHHHHHH----Hhhc-CCCEE
Confidence 468889999988754332 344444445556667787 6666433221 1112222 2222 22444
Q ss_pred EEcc---cC------------------------CCCcHH-HHHHHhhcCeE-EEeeCCceeeccCCCCCHHHHHHHHHHH
Q psy6266 160 ILHA---CA------------------------HNPTAQ-QVAHMVDKHHV-YLLRSGRINMCGLTTQNLDHVAQAIHDA 210 (218)
Q Consensus 160 il~~---~p------------------------~NPTG~-~l~~l~~~~~i-~ii~D~r~~y~~l~~~ni~~~~~a~~~~ 210 (218)
++-- .. .|-.-. ++.++.++.++ +.+.| -+|-.+.--|++..-++|+++
T Consensus 125 LLaGGtDGG~~e~~l~NA~~La~~~~~~pIIyAGN~~a~~~V~~il~~~~~~~~i~e--NV~P~i~~ln~epaR~~I~~v 202 (463)
T TIGR01319 125 LFAGGTDGGEEECGIHNAKMLAEHGLDCAIIVAGNKDIQDEVQEIFDHADIFYRITD--NVLPDLDHLNPEAAREAICDI 202 (463)
T ss_pred EEeCCcCCCchHHHHHHHHHHHhcCCCCcEEEeCCHHHHHHHHHHHhcCCceEEecC--CcCCCCCCcCchHHHHHHHHH
Confidence 4321 11 111111 57777776553 45566 688899999999999999999
Q ss_pred HH
Q psy6266 211 VT 212 (218)
Q Consensus 211 ~~ 212 (218)
|.
T Consensus 203 F~ 204 (463)
T TIGR01319 203 FL 204 (463)
T ss_pred HH
Confidence 74
No 404
>PRK08156 type III secretion system protein SpaS; Validated
Probab=49.75 E-value=24 Score=31.19 Aligned_cols=16 Identities=25% Similarity=0.279 Sum_probs=15.2
Q ss_pred HHHHHhhcCeEEEeeC
Q psy6266 172 QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D 187 (218)
+|.++|++|+|.+++|
T Consensus 288 ~IreiA~e~~VPiven 303 (361)
T PRK08156 288 AVRAYAEKVGVPVVRD 303 (361)
T ss_pred HHHHHHHHCCCCEeeC
Confidence 6889999999999999
No 405
>PRK12772 bifunctional flagellar biosynthesis protein FliR/FlhB; Provisional
Probab=45.20 E-value=28 Score=33.02 Aligned_cols=16 Identities=6% Similarity=0.370 Sum_probs=15.2
Q ss_pred HHHHHhhcCeEEEeeC
Q psy6266 172 QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D 187 (218)
+|.++|+||+|.+++|
T Consensus 556 ~Ir~~A~e~~VPive~ 571 (609)
T PRK12772 556 KIKEIAKENDVPIIEN 571 (609)
T ss_pred HHHHHHHHCCCcEEeC
Confidence 6889999999999999
No 406
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=44.64 E-value=46 Score=27.12 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=26.3
Q ss_pred CCCcE-EEEcccCCCCcHHHHHHHhhcCeEEEee
Q psy6266 154 PDNSV-IILHACAHNPTAQQVAHMVDKHHVYLLR 186 (218)
Q Consensus 154 ~~~~~-iil~~~p~NPTG~~l~~l~~~~~i~ii~ 186 (218)
+++++ +++.||.-||-+.++++++++++..+|.
T Consensus 103 ~~~DVliviSnSGrNpvpie~A~~~rekGa~vI~ 136 (243)
T COG4821 103 RPNDVLIVISNSGRNPVPIEVAEYAREKGAKVIA 136 (243)
T ss_pred CCCCEEEEEeCCCCCCcchHHHHHHHhcCCeEEE
Confidence 45555 4566899999999999999999877664
No 407
>KOG1358|consensus
Probab=44.45 E-value=2.4e+02 Score=25.51 Aligned_cols=161 Identities=6% Similarity=-0.025 Sum_probs=84.5
Q ss_pred CCCceeeeeeeEEeCCCCCccCchHHHHHHHHHhhcCC-C----CccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceE
Q psy6266 5 SGEIHCCEIRNAYRTEECKPWVLPVVRQAEKELAADDS-L----NHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAF 79 (218)
Q Consensus 5 ~~~~~i~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~-~----~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~ 79 (218)
.|++++|++--.+-+ +.--+.+++.+...++.-+ + .--|....=...|-+.+|+++-. .+ .|
T Consensus 92 ~G~~~~N~aS~NfL~----l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~-E~-------ai- 158 (467)
T KOG1358|consen 92 DGKDVLNFASANFLG----LIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGT-ED-------AI- 158 (467)
T ss_pred cCceeecccchhhhh----hcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCC-cc-------ee-
Confidence 588899998886532 3345566665555554310 1 11266666667777888877733 22 11
Q ss_pred EEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcC------
Q psy6266 80 GVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNA------ 153 (218)
Q Consensus 80 ~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~------ 153 (218)
+-.=+-.++..+.-++. ..||.+.+-+-.--.-..-+++..- ++..+ .. .|++.++..+.+.
T Consensus 159 --vYs~gF~ti~S~ipafs--KrGDIi~~de~~nfaIq~GlqlSRS-~i~~F---kh----ndm~~lerll~E~~~~~~K 226 (467)
T KOG1358|consen 159 --VYSYGFSTIESAIPAFS--KRGDIIFVDEAVNFAIQKGLQLSRS-TISYF---KH----NDMEDLERLLPEQEDEDQK 226 (467)
T ss_pred --eeccccchhhhcchhhh--ccCcEEEEehhhhHHHHHHHhhhhh-eeEEe---cC----CCHHHHHHhccCcchhhhh
Confidence 11111122222233332 2699888765553333333333322 33333 32 2555554444321
Q ss_pred -CC----CcEEEEcccCCCCcHH-----HHHHHhhcCeEEEeeCCceeec
Q psy6266 154 -PD----NSVIILHACAHNPTAQ-----QVAHMVDKHHVYLLRSGRINMC 193 (218)
Q Consensus 154 -~~----~~~iil~~~p~NPTG~-----~l~~l~~~~~i~ii~D~r~~y~ 193 (218)
++ +.+++...-.+ +||. .|.++..|+...+|-| |.|+
T Consensus 227 ~~k~~~~Rrfiv~EGl~~-N~g~i~pl~~iv~lk~Kyk~Rvild--Es~S 273 (467)
T KOG1358|consen 227 NPKKALTRRFIVVEGLYA-NTGDICPLPEIVKLKNKYKFRVILD--ESLS 273 (467)
T ss_pred ccccccceEEEEEEeecc-CCCcccccHHHHHHHhhheEEEEEe--cccc
Confidence 11 23444443333 3565 7899999999999999 6654
No 408
>PRK09108 type III secretion system protein HrcU; Validated
Probab=43.92 E-value=37 Score=29.97 Aligned_cols=16 Identities=0% Similarity=0.036 Sum_probs=15.2
Q ss_pred HHHHHhhcCeEEEeeC
Q psy6266 172 QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D 187 (218)
+|.++|++|+|.+++|
T Consensus 295 ~Ir~~A~e~~VPvven 310 (353)
T PRK09108 295 ALRRHAHALGIPIVGN 310 (353)
T ss_pred HHHHHHHHcCCCEEeC
Confidence 6889999999999999
No 409
>TIGR02998 RraA_entero regulator of ribonuclease activity A. THIS PROTEIN IS _NOT_ MenG, AKA S-adenosylmethionine: 2-demethylmenaquinone methyltransferase (EC 2.1.-.-). See the references characterizing this as a case of transitive annotation error .
Probab=43.32 E-value=25 Score=27.42 Aligned_cols=78 Identities=10% Similarity=0.088 Sum_probs=52.3
Q ss_pred CCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCc---HHHHHHHhhc
Q psy6266 103 YTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPT---AQQVAHMVDK 179 (218)
Q Consensus 103 gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPT---G~~l~~l~~~ 179 (218)
++++-+.+|.|-+|....+..| ....+.+.. |-..+.++|....+++++++...-..-+ |..++..|+.
T Consensus 13 ~~~~~~~~~~~~~~g~~~~~~G--~A~TV~~~~------d~~~~~~aid~~~pGdVlVid~~g~~~~A~~G~~la~~a~~ 84 (161)
T TIGR02998 13 ADLVDVVEPIFSNFGGRSSFGG--KVVTVKCFE------HNGLINELLEQNGTGRVLVIDGGGSTRRALIDAELAQLAAN 84 (161)
T ss_pred cccccEecccccccCCCCEEEE--EEEEEEeeC------CcHHHHHHHhccCCCeEEEEECCCCCceEeeCHHHHHHHHH
Confidence 5777788999999887777776 466666542 2245777788777888888754322222 2367777777
Q ss_pred CeEE-EeeCC
Q psy6266 180 HHVY-LLRSG 188 (218)
Q Consensus 180 ~~i~-ii~D~ 188 (218)
+++- +|.||
T Consensus 85 ~G~aGvVidG 94 (161)
T TIGR02998 85 NGWEGIVVYG 94 (161)
T ss_pred CCCeEEEEee
Confidence 7754 67776
No 410
>KOG1402|consensus
Probab=42.37 E-value=41 Score=29.64 Aligned_cols=48 Identities=21% Similarity=0.272 Sum_probs=31.6
Q ss_pred cHHHHHHHHhcCCCCcEEE---------EcccCCCCcHH--HHHHHhhcCeEEEeeCCceeeccC
Q psy6266 142 DFTGMYEDLVNAPDNSVII---------LHACAHNPTAQ--QVAHMVDKHHVYLLRSGRINMCGL 195 (218)
Q Consensus 142 d~~~~~~~l~~~~~~~~ii---------l~~~p~NPTG~--~l~~l~~~~~i~ii~D~r~~y~~l 195 (218)
|.+.++.+|.+..-..+++ +.+ |-|. .+.+||++|++++|.| |+=.|+
T Consensus 195 d~eale~~l~~~~vaaFivEPIQGEaGVvvP----~~GYL~~vreLCtkynvl~I~D--EvQTGl 253 (427)
T KOG1402|consen 195 DAEALEVALKSPNVAAFIVEPIQGEAGVVVP----PPGYLKKVRELCTKYNVLLIAD--EVQTGL 253 (427)
T ss_pred CHHHHHHHhcCCCeeEEEeeccccccceEeC----CchhHHHHHHHHHhhcEEEEeh--hhhhcc
Confidence 6778888886521111211 112 4465 7899999999999999 666554
No 411
>TIGR00328 flhB flagellar biosynthetic protein FlhB. FlhB and its functionally equivalent orthologs, from among a larger superfamily of proteins involved in type III protein export systems, are specifically involved in flagellar protein export. The seed members are restricted and the trusted cutoff is set high such that the proteins gathered by this model play roles specifically related to flagellar structures. Full-length homologs scoring below the trusted cutoff are involved in peptide export but not necessarily in the creation of flagella.
Probab=40.66 E-value=48 Score=29.16 Aligned_cols=16 Identities=6% Similarity=0.349 Sum_probs=15.1
Q ss_pred HHHHHhhcCeEEEeeC
Q psy6266 172 QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D 187 (218)
+|.++|++++|.+++|
T Consensus 293 ~I~~~A~~~~vPi~~~ 308 (347)
T TIGR00328 293 KIKEIARENNVPIVEN 308 (347)
T ss_pred HHHHHHHHcCCCEEeC
Confidence 6889999999999999
No 412
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=40.01 E-value=2.2e+02 Score=24.26 Aligned_cols=115 Identities=9% Similarity=0.181 Sum_probs=66.3
Q ss_pred HHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEec
Q psy6266 54 ESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRY 133 (218)
Q Consensus 54 ~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~ 133 (218)
.+-++.+..|+.+ ........+.|- ..+-|.++-+.+++..+ ..-+-+++-+|. .|+ +|+..
T Consensus 105 ~e~~~~~~~wLer-~~i~~~~~~kIk-~LSKGnqQKIQfisavi---HePeLlILDEPF----------SGL-DPVN~-- 166 (300)
T COG4152 105 AEIQKKLQAWLER-LEIVGKKTKKIK-ELSKGNQQKIQFISAVI---HEPELLILDEPF----------SGL-DPVNV-- 166 (300)
T ss_pred HHHHHHHHHHHHh-ccccccccchHH-HhhhhhhHHHHHHHHHh---cCCCEEEecCCc----------cCC-ChhhH--
Confidence 4566777777754 333222333442 35678899998887655 345888888886 477 67654
Q ss_pred cCCcCccccHHHHHHHHhcC-CCCcEEEEcccCCCCcHHHHHHHhhcCeEEEeeCCceeeccCCCCCHHHHHHH
Q psy6266 134 WNPEKRAVDFTGMYEDLVNA-PDNSVIILHACAHNPTAQQVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQA 206 (218)
Q Consensus 134 ~~~~~~~~d~~~~~~~l~~~-~~~~~iil~~~p~NPTG~~l~~l~~~~~i~ii~D~r~~y~~l~~~ni~~~~~a 206 (218)
+.+++.+.+. ..++-+++ |-|+= ..+.+||. ++.++.+|+-+. ++++..++++
T Consensus 167 ----------elLk~~I~~lk~~GatIif--SsH~M--e~vEeLCD--~llmL~kG~~V~----~G~v~~ir~~ 220 (300)
T COG4152 167 ----------ELLKDAIFELKEEGATIIF--SSHRM--EHVEELCD--RLLMLKKGQTVL----YGTVEDIRRS 220 (300)
T ss_pred ----------HHHHHHHHHHHhcCCEEEE--ecchH--HHHHHHhh--hhheecCCceEE----eccHHHHHHh
Confidence 3445544433 23444454 44664 25566764 567777775553 3445555543
No 413
>KOG3851|consensus
Probab=39.64 E-value=19 Score=31.64 Aligned_cols=45 Identities=16% Similarity=0.159 Sum_probs=31.2
Q ss_pred EEEeccChhHHHHHHHHHHHhcCCCeEEecCCC-chhHHHHHHHhCC
Q psy6266 80 GVQTLSGTGALRVGAEFLHRILNYTTFYYSKPT-WENHRLVFLNAGF 125 (218)
Q Consensus 80 ~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~-y~~y~~~~~~~g~ 125 (218)
+++.-||+|++.+++++-+++.. ++|-|-+|. +.-|.+.+.+.|+
T Consensus 42 vLVvGGGsgGi~~A~k~~rkl~~-g~vgIvep~e~HyYQPgfTLvGg 87 (446)
T KOG3851|consen 42 VLVVGGGSGGIGMAAKFYRKLGS-GSVGIVEPAEDHYYQPGFTLVGG 87 (446)
T ss_pred EEEEcCCcchhHHHHHHHhhcCC-CceEEecchhhcccCcceEEecc
Confidence 46888999999999998877744 455555553 4445566666655
No 414
>KOG2865|consensus
Probab=37.24 E-value=1.6e+02 Score=25.60 Aligned_cols=87 Identities=13% Similarity=0.094 Sum_probs=49.8
Q ss_pred EeccChh--HHHHHHHHHHHhcCCCeEEec---CCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCC
Q psy6266 82 QTLSGTG--ALRVGAEFLHRILNYTTFYYS---KPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDN 156 (218)
Q Consensus 82 ~t~G~~~--al~~~~~~l~~l~~gd~V~i~---~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~ 156 (218)
...|++| +.++.-++- .-|..|++| +++++-+....--.| .+..+++ +. .|-+.+++.++.
T Consensus 65 TVFGAtGFlGryvvnkla---k~GSQviiPyR~d~~~~r~lkvmGdLG--Qvl~~~f-d~----~DedSIr~vvk~---- 130 (391)
T KOG2865|consen 65 TVFGATGFLGRYVVNKLA---KMGSQVIIPYRGDEYDPRHLKVMGDLG--QVLFMKF-DL----RDEDSIRAVVKH---- 130 (391)
T ss_pred EEecccccccHHHHHHHh---hcCCeEEEeccCCccchhheeeccccc--ceeeecc-CC----CCHHHHHHHHHh----
Confidence 4468888 556555432 249999998 666665553333333 2334332 22 277889988853
Q ss_pred cEEEEc-ccC-----------CCCcHH-HHHHHhhcCeE
Q psy6266 157 SVIILH-ACA-----------HNPTAQ-QVAHMVDKHHV 182 (218)
Q Consensus 157 ~~iil~-~~p-----------~NPTG~-~l~~l~~~~~i 182 (218)
+-++++ ..- -|=+|. .|+++|++-++
T Consensus 131 sNVVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GV 169 (391)
T KOG2865|consen 131 SNVVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGV 169 (391)
T ss_pred CcEEEEeeccccccCCcccccccchHHHHHHHHHHhhCh
Confidence 223332 111 234444 79999998775
No 415
>PF11149 DUF2924: Protein of unknown function (DUF2924); InterPro: IPR021322 This entry is represented by Bacteriophage WO, Gp30. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This bacterial family of proteins has no known function.
Probab=35.43 E-value=44 Score=25.30 Aligned_cols=30 Identities=30% Similarity=0.478 Sum_probs=26.4
Q ss_pred hcCeEEEeeCCceeeccCCCCCHHHHHHHHH
Q psy6266 178 DKHHVYLLRSGRINMCGLTTQNLDHVAQAIH 208 (218)
Q Consensus 178 ~~~~i~ii~D~r~~y~~l~~~ni~~~~~a~~ 208 (218)
++|.+.|..|| ..|.|-.|.++--+|++|-
T Consensus 94 ~~h~V~V~~dG-fey~Gr~y~SLSaIAr~IT 123 (136)
T PF11149_consen 94 REHEVTVLEDG-FEYQGRRYKSLSAIARAIT 123 (136)
T ss_pred EEEEEEEeCCC-EEECCccccCHHHHHHHHh
Confidence 45889999999 9999999999999999863
No 416
>PRK12773 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=35.23 E-value=35 Score=32.36 Aligned_cols=16 Identities=6% Similarity=0.133 Sum_probs=15.1
Q ss_pred HHHHHhhcCeEEEeeC
Q psy6266 172 QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D 187 (218)
+|.++|++|+|.+++|
T Consensus 592 rIReiAeE~gVPIVEN 607 (646)
T PRK12773 592 LIIRIARENGVPTVED 607 (646)
T ss_pred HHHHHHHHcCCcEEEC
Confidence 6889999999999999
No 417
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=34.06 E-value=1.9e+02 Score=21.24 Aligned_cols=97 Identities=8% Similarity=0.104 Sum_probs=58.3
Q ss_pred EEecCCCchhHHHHHHHhCCC--------cceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEc----ccCCCCcHH--
Q psy6266 106 FYYSKPTWENHRLVFLNAGFT--------EAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILH----ACAHNPTAQ-- 171 (218)
Q Consensus 106 V~i~~P~y~~y~~~~~~~g~~--------~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~----~~p~NPTG~-- 171 (218)
|+..--.|.+|.. +.++|.+ .++.+|+ ...+|..-+..++++ ..+-|++. ..||..+|.
T Consensus 2 Il~F~C~~~ay~a-ad~ag~~~~~~p~~vriIrvpC----~Grv~~~~il~Af~~--GADGV~V~gC~~g~Ch~~~Gn~~ 74 (124)
T PF02662_consen 2 ILAFCCNWCAYAA-ADLAGVSRLQYPPNVRIIRVPC----SGRVDPEFILRAFEK--GADGVLVAGCHPGDCHYREGNYR 74 (124)
T ss_pred EEEEEeCCCcHHH-HHHHhhccCCCCCCeEEEEccC----CCccCHHHHHHHHHc--CCCEEEEeCCCCCCCCcchhhHH
Confidence 3444455666643 3444420 3444444 246789999999975 22333432 256778887
Q ss_pred ------HHHHHhhcCeEEEeeCCceeeccCCCCCHHHHHHHHHHHHH
Q psy6266 172 ------QVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDAVT 212 (218)
Q Consensus 172 ------~l~~l~~~~~i~ii~D~r~~y~~l~~~ni~~~~~a~~~~~~ 212 (218)
.+.++.++.+ |.-+|..+..+...+-+.++..+.+...
T Consensus 75 a~~Rv~~~k~~L~~~G---i~~eRv~~~~~~~~~~~~fa~~~~~f~~ 118 (124)
T PF02662_consen 75 AEKRVERLKKLLEELG---IEPERVRLYWISAPEGKRFAEIVNEFTE 118 (124)
T ss_pred HHHHHHHHHHHHHHcC---CChhHeEEEEeCcccHHHHHHHHHHHHH
Confidence 2444555555 2335888888888888888888877744
No 418
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=33.93 E-value=2.7e+02 Score=22.99 Aligned_cols=84 Identities=14% Similarity=0.181 Sum_probs=51.7
Q ss_pred CCCeEEecCCCchhHH----HHHHHhCCCcceeEeccCC-cC---ccccHHHHHHHHhcC--CCCcEEEEcccCCCCcHH
Q psy6266 102 NYTTFYYSKPTWENHR----LVFLNAGFTEAREYRYWNP-EK---RAVDFTGMYEDLVNA--PDNSVIILHACAHNPTAQ 171 (218)
Q Consensus 102 ~gd~V~i~~P~y~~y~----~~~~~~g~~~~~~~~~~~~-~~---~~~d~~~~~~~l~~~--~~~~~iil~~~p~NPTG~ 171 (218)
.-++|-+-.||-..-. ..++..|. ++..+..+.. +. ..++.+.+.+.+.+. +....++ +.|-|=+|-.
T Consensus 119 g~~RIalvTPY~~~v~~~~~~~l~~~G~-eV~~~~~~~~~~~~~ia~i~p~~i~~~~~~~~~~~aDAif-isCTnLrt~~ 196 (239)
T TIGR02990 119 GVRRISLLTPYTPETSRPMAQYFAVRGF-EIVNFTCLGLTDDREMARISPDCIVEAALAAFDPDADALF-LSCTALRAAT 196 (239)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCc-EEeeeeccCCCCCceeeecCHHHHHHHHHHhcCCCCCEEE-EeCCCchhHH
Confidence 4689999999755432 34677888 7776643322 11 234777787777653 2334444 4444445555
Q ss_pred HHHHHhhcCeEEEeeC
Q psy6266 172 QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D 187 (218)
-+.++-++.++.|++.
T Consensus 197 vi~~lE~~lGkPVlsS 212 (239)
T TIGR02990 197 CAQRIEQAIGKPVVTS 212 (239)
T ss_pred HHHHHHHHHCCCEEEH
Confidence 6666767788888875
No 419
>PF01312 Bac_export_2: FlhB HrpN YscU SpaS Family; InterPro: IPR006135 Salmonella, and related proteobacteria, secrete large amounts of proteins into the culture media. The major secreted proteins are either flagellar proteins or virulence factors [], secreted through the flagellar or virulence export structures respectively. Both secretion systems penetrate the inner and outer membranes and their components bear substantial sequence similarity. Both the flagellar and needle like pilus look fairly similar to each other []. The type III secretion system is of great interest, as it is used to transport virulence factors from the pathogen directly into the host cell [] and is only triggered when the bacterium comes into close contact with the host. It is believed that the family of type III flagellar and pilus inner membrane proteins are used as structural moieties in a complex with several other subunits []. One such set of inner membrane proteins, labeled "S" here for nomenclature purposes, includes the Salmonella and Shigella SpaS, the Yersinia YscU, Rhizobium Y4YO, and the Erwinia HrcU genes, Salmonella FlhB and Escherichia coli EscU [, , , ]. Many of the proteins, in this entry, undergo autocatalytic cleavage promoted by cyclization of a conserved asparagine. These proteins belong to the MEROPS peptidase family N6. ; GO: 0009306 protein secretion, 0016020 membrane; PDB: 3C03_C 3BZT_A 3BZV_B 3BZP_A 3BZX_B 3BZL_B 3C00_A 3BZR_A 3BZY_A 3BZO_A ....
Probab=33.76 E-value=19 Score=31.62 Aligned_cols=26 Identities=15% Similarity=0.333 Sum_probs=18.9
Q ss_pred HHHHHhhcCeEEEeeCCceeeccCCCCCHHHHHHHHHHH
Q psy6266 172 QVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDA 210 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D~r~~y~~l~~~ni~~~~~a~~~~ 210 (218)
+|.++|++|+|.|++| -.+|++++..
T Consensus 295 ~Ir~~A~~~~VPiven-------------~pLARaLy~~ 320 (343)
T PF01312_consen 295 RIREIAREHGVPIVEN-------------PPLARALYRT 320 (343)
T ss_dssp HHHHHHHHHT--EEE--------------HHHHHHHHHH
T ss_pred HHHHHHHHcCCCeeeC-------------HHHHHHHHhc
Confidence 6889999999999999 5677776665
No 420
>TIGR01226 phe_am_lyase phenylalanine ammonia-lyase. Members of this family are found, so far, in plants and fungi. From phenylalanine, this enzyme yields cinnaminic acid, a precursor of many important plant compounds. This protein shows extensive homology to histidine ammonia-lyase, the first enzyme of a histidine degradation pathway.
Probab=32.99 E-value=3e+02 Score=26.63 Aligned_cols=94 Identities=17% Similarity=0.041 Sum_probs=53.1
Q ss_pred ccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHH-HHHHhcC
Q psy6266 24 PWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAE-FLHRILN 102 (218)
Q Consensus 24 ~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~-~l~~l~~ 102 (218)
+-+.+.||.++.--++. ...+|+... +++.+++.+++.. . ..+.-|.+ -+.|++|-|.-++. ++...-.
T Consensus 126 ~lp~~~vRAaMlvRlNs--L~~G~SGVr--~evle~l~~lLN~-~-i~P~VP~r----GSIGASGDL~PLShIa~aL~Ge 195 (680)
T TIGR01226 126 SLPEEATRAAMLVRINT--LLQGYSGIR--FEILEAITKLLNA-N-VTPCLPLR----GTITASGDLVPLSYIAGLITGR 195 (680)
T ss_pred cCCHHHHHHHHHHHHHH--hccCCCCCC--HHHHHHHHHHHhC-c-CcccCCCC----CCcCccchHHHHHHHHHHHcCC
Confidence 44455666554433322 345676654 8999999998864 3 22233333 55677775554433 2221334
Q ss_pred CCe-EEecCCCchhHHHHHHHhCCCcc
Q psy6266 103 YTT-FYYSKPTWENHRLVFLNAGFTEA 128 (218)
Q Consensus 103 gd~-V~i~~P~y~~y~~~~~~~g~~~~ 128 (218)
|+. ++.++-..-+-...++.+|+ +|
T Consensus 196 g~v~~~~~~G~~~~a~eAL~~aGl-~p 221 (680)
T TIGR01226 196 PNSKVYSPDGQIMSAAEALKLAGI-EG 221 (680)
T ss_pred CCceeecCCCeEEeHHHHHHHcCC-CC
Confidence 442 34434455566788999999 77
No 421
>PHA02678 hypothetical protein; Provisional
Probab=32.47 E-value=1.3e+02 Score=20.75 Aligned_cols=77 Identities=17% Similarity=0.217 Sum_probs=44.9
Q ss_pred CCeEEecCCC--chhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHHHHHHHhhc-
Q psy6266 103 YTTFYYSKPT--WENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQQVAHMVDK- 179 (218)
Q Consensus 103 gd~V~i~~P~--y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~~l~~l~~~- 179 (218)
.+++++-.|+ ||... +... + ++..+|.. ....++. .+.+ .-+++ ++ -|||-.||...+..
T Consensus 5 DnTlIVy~~g~~WP~~L--~~~~-g-k~l~fps~----nS~tf~~---~I~~-d~~sv-LL----VNPT~~qLl~~~~~~ 67 (89)
T PHA02678 5 SDTVIVAVPGTRFPEGL--FDRQ-G-RPLGPGST----PTMEYED---SVPR-DARAL-LL----VNPTAGQLAAVAAGA 67 (89)
T ss_pred CCeEEEeecCCCCCcce--EcCC-C-CCcCCCCC----Cceeecc---ccCc-ccceE-EE----ECCCHHHHHHhhcCC
Confidence 5788888777 99743 2322 3 56666542 2233333 2322 12233 33 46998888877743
Q ss_pred ---CeEEEeeCCceeeccCCCC
Q psy6266 180 ---HHVYLLRSGRINMCGLTTQ 198 (218)
Q Consensus 180 ---~~i~ii~D~r~~y~~l~~~ 198 (218)
-.+.++.| ..|...-|+
T Consensus 68 ~~~~~~~~~~~--~~~~~~~~~ 87 (89)
T PHA02678 68 PAGVRVLVLVD--VARCDMPFS 87 (89)
T ss_pred CCCcEEEEEEE--eeeecCCcc
Confidence 46788888 887766543
No 422
>KOG1209|consensus
Probab=31.57 E-value=3.1e+02 Score=22.90 Aligned_cols=83 Identities=13% Similarity=0.109 Sum_probs=47.8
Q ss_pred EEEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEE
Q psy6266 80 GVQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVI 159 (218)
Q Consensus 80 ~~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i 159 (218)
+++|.|++|++-.++. ......|=.|+-..-.-..-.......|+ .+..+....+ -.+..+...++..+.++.=
T Consensus 10 VlItgcs~GGIG~ala-~ef~~~G~~V~AtaR~~e~M~~L~~~~gl-~~~kLDV~~~----~~V~~v~~evr~~~~Gkld 83 (289)
T KOG1209|consen 10 VLITGCSSGGIGYALA-KEFARNGYLVYATARRLEPMAQLAIQFGL-KPYKLDVSKP----EEVVTVSGEVRANPDGKLD 83 (289)
T ss_pred EEEeecCCcchhHHHH-HHHHhCCeEEEEEccccchHhhHHHhhCC-eeEEeccCCh----HHHHHHHHHHhhCCCCceE
Confidence 4689899998765543 11134688888877766655555556777 6766644222 1344455555543445544
Q ss_pred EEcccCCCC
Q psy6266 160 ILHACAHNP 168 (218)
Q Consensus 160 il~~~p~NP 168 (218)
++.|+..-|
T Consensus 84 ~L~NNAG~~ 92 (289)
T KOG1209|consen 84 LLYNNAGQS 92 (289)
T ss_pred EEEcCCCCC
Confidence 444444333
No 423
>PRK05702 flhB flagellar biosynthesis protein FlhB; Reviewed
Probab=31.46 E-value=69 Score=28.33 Aligned_cols=16 Identities=13% Similarity=0.445 Sum_probs=15.1
Q ss_pred HHHHHhhcCeEEEeeC
Q psy6266 172 QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D 187 (218)
+|.++|++++|.+++|
T Consensus 300 ~i~~~A~~~~vpi~~~ 315 (359)
T PRK05702 300 KIREIAREHNVPIVEN 315 (359)
T ss_pred HHHHHHHHcCCCEEeC
Confidence 5889999999999999
No 424
>PRK12566 glycine dehydrogenase; Provisional
Probab=30.19 E-value=5e+02 Score=26.31 Aligned_cols=95 Identities=15% Similarity=0.083 Sum_probs=48.2
Q ss_pred eeeeeEEeCCCCCccCchHHHHHHHHHhhcCCCCccCcCCC-----C----cHHHHHHHHHHhcCCCCCCCcCCCceEEE
Q psy6266 11 CEIRNAYRTEECKPWVLPVVRQAEKELAADDSLNHEYLPVL-----G----LESFSSAATRMLLGGDASPPLREGRAFGV 81 (218)
Q Consensus 11 ~l~iG~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~-----G----~~~lr~aia~~~~~~~~~~~~~~~~v~~~ 81 (218)
=+|.|.| +-.+|..|.+ .+++.++..+.|+|.+ | +-+|...++++. | -+ +. +- -
T Consensus 83 fiG~G~y-----~~~~P~vi~~---~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~Lt-G-m~---va--NA--S 145 (954)
T PRK12566 83 LIGMGYH-----GTVTPTVILR---NVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLT-G-LD---LA--NA--S 145 (954)
T ss_pred ccccccc-----CCcCcHHHHH---HHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHh-C-ch---hh--hh--h
Confidence 3567765 1346676743 2333334567888854 4 334444555443 2 11 00 00 0
Q ss_pred EeccChhHHHHHHHHHHHhcC--CCeEEecCCCchhHHHHHHHh
Q psy6266 82 QTLSGTGALRVGAEFLHRILN--YTTFYYSKPTWENHRLVFLNA 123 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~--gd~V~i~~P~y~~y~~~~~~~ 123 (218)
.--|++.+-...+++.+ ... ..+|++++-..|.+...++..
T Consensus 146 l~D~atA~aEA~~ma~~-~~~~k~~~~~v~~~~hP~~~~v~~t~ 188 (954)
T PRK12566 146 LLDEATAAAEAMALAKR-VAKSKSNRFFVDEHCHPQTLSVLRTR 188 (954)
T ss_pred hccchhHHHHHHHHHHH-HhhcCCCEEEECCCCCHHHHHHHHHh
Confidence 11244433332222322 222 468999999999998766643
No 425
>PRK08638 threonine dehydratase; Validated
Probab=29.90 E-value=3.7e+02 Score=23.28 Aligned_cols=49 Identities=14% Similarity=-0.069 Sum_probs=31.1
Q ss_pred EEeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeE
Q psy6266 81 VQTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREY 131 (218)
Q Consensus 81 ~~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~ 131 (218)
+.+.+|+.++.+++.+-. +.---.|++|+-.-+.-...++..|+ +++..
T Consensus 79 v~~SsGN~g~alA~~aa~-~G~~~~iv~p~~~~~~k~~~~~~~GA-~V~~~ 127 (333)
T PRK08638 79 VACSAGNHAQGVALSCAL-LGIDGKVVMPKGAPKSKVAATCGYGA-EVVLH 127 (333)
T ss_pred EEeCCcHHHHHHHHHHHH-cCCCEEEEeCCCCcHHHHHHHHHcCC-EEEEE
Confidence 455566677777665432 22234555665555566678899999 88876
No 426
>PRK00366 ispG 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Reviewed
Probab=29.70 E-value=83 Score=27.79 Aligned_cols=85 Identities=9% Similarity=0.091 Sum_probs=51.5
Q ss_pred cceeEeccCCcCccccHHHHHHHHhcC-CCCcEEEEcccCCCCcHHHHHHHhhcCeEEEeeCCceeec------------
Q psy6266 127 EAREYRYWNPEKRAVDFTGMYEDLVNA-PDNSVIILHACAHNPTAQQVAHMVDKHHVYLLRSGRINMC------------ 193 (218)
Q Consensus 127 ~~~~~~~~~~~~~~~d~~~~~~~l~~~-~~~~~iil~~~p~NPTG~~l~~l~~~~~i~ii~D~r~~y~------------ 193 (218)
.|+.+.. ..++..-|.++..+++.+. ..+.-++=...|.-=.-..+.++.++-++.++.|- -|.
T Consensus 26 ~Pi~VQS-Mt~t~T~Dv~atv~Qi~~L~~aGceiVRvav~~~~~a~al~~I~~~~~iPlvADI--HFd~~lAl~a~~~G~ 102 (360)
T PRK00366 26 APIVVQS-MTNTDTADVEATVAQIKRLARAGCEIVRVAVPDMEAAAALPEIKKQLPVPLVADI--HFDYRLALAAAEAGA 102 (360)
T ss_pred CcEEEEe-cCCCCchhHHHHHHHHHHHHHcCCCEEEEccCCHHHHHhHHHHHHcCCCCEEEec--CCCHHHHHHHHHhCC
Confidence 6776654 2334455777776666543 22322333222222212267788888889999983 332
Q ss_pred ---cCCCCCHHHHHHHHHHHHHcC
Q psy6266 194 ---GLTTQNLDHVAQAIHDAVTSI 214 (218)
Q Consensus 194 ---~l~~~ni~~~~~a~~~~~~~~ 214 (218)
.++.+||...-+.+.+++.-+
T Consensus 103 ~~iRINPGNig~~~~~v~~vv~~a 126 (360)
T PRK00366 103 DALRINPGNIGKRDERVREVVEAA 126 (360)
T ss_pred CEEEECCCCCCchHHHHHHHHHHH
Confidence 478899988888888887743
No 427
>cd01132 F1_ATPase_alpha F1 ATP synthase alpha, central domain. The F-ATPase is found in bacterial plasma membranes, mitochondrial inner membranes and in chloroplast thylakoid membranes. It has also been found in the archaea Methanosarcina barkeri. It uses a proton gradient to drive ATP synthesis and hydrolyzes ATP to build the proton gradient. The extrinisic membrane domain, F1, is composed of alpha, beta, gamma, delta and epsilon subunits with a stoichiometry of 3:3:1:1:1. The alpha subunit of the F1 ATP synthase can bind nucleotides, but is non-catalytic.
Probab=29.40 E-value=3.1e+02 Score=23.30 Aligned_cols=59 Identities=14% Similarity=0.239 Sum_probs=36.0
Q ss_pred cHHHHHHHHhcC--CCCcEEEEcccCCCCcHH---------HHHHHhhc--CeEEEeeCCceeeccCCCCCHHHHHHHHH
Q psy6266 142 DFTGMYEDLVNA--PDNSVIILHACAHNPTAQ---------QVAHMVDK--HHVYLLRSGRINMCGLTTQNLDHVAQAIH 208 (218)
Q Consensus 142 d~~~~~~~l~~~--~~~~~iil~~~p~NPTG~---------~l~~l~~~--~~i~ii~D~r~~y~~l~~~ni~~~~~a~~ 208 (218)
+...+.+.+.+. ..+++ ++.++.+.|.+. .++|..++ +++.++-| |+-+.|+|.+
T Consensus 111 ev~e~~~~~~~~~~~~~tv-vv~~t~d~~~~~r~~a~~~a~aiAE~fr~~G~~Vlvl~D-----------slTr~A~A~r 178 (274)
T cd01132 111 TVAQVVKTLEEHGAMEYTI-VVAATASDPAPLQYLAPYTGCAMGEYFMDNGKHALIIYD-----------DLSKQAVAYR 178 (274)
T ss_pred HHHHHHHHHHhcCccceeE-EEEeCCCCchhHHHHHHHHHHHHHHHHHHCCCCEEEEEc-----------ChHHHHHHHH
Confidence 444555555432 23455 444677888786 35554433 67777776 4568888888
Q ss_pred HHHH
Q psy6266 209 DAVT 212 (218)
Q Consensus 209 ~~~~ 212 (218)
|+-.
T Consensus 179 Eisl 182 (274)
T cd01132 179 QMSL 182 (274)
T ss_pred HHHH
Confidence 8754
No 428
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=29.36 E-value=33 Score=22.06 Aligned_cols=38 Identities=16% Similarity=0.364 Sum_probs=29.0
Q ss_pred HHHHHhhcCe---EEEeeCCceeeccCCCCCHHHHHHHHHH
Q psy6266 172 QVAHMVDKHH---VYLLRSGRINMCGLTTQNLDHVAQAIHD 209 (218)
Q Consensus 172 ~l~~l~~~~~---i~ii~D~r~~y~~l~~~ni~~~~~a~~~ 209 (218)
.|++++++++ +-+-.+..+.+.++...+++.+...+.+
T Consensus 28 ~la~ia~~yg~~~irlT~~Q~l~l~~v~~~~~~~i~~~L~~ 68 (69)
T PF03460_consen 28 ALAEIAEKYGDGEIRLTTRQNLQLRGVPEENLPAIFEELKE 68 (69)
T ss_dssp HHHHHHHHHSTSEEEEETTSCEEEEEEEGGGHHHHHHHHHH
T ss_pred HHHHHHHHhCCCeEEECCCCeEEEeCCCHHHHHHHHHHHHc
Confidence 6888888875 4444555678888889999999888776
No 429
>KOG2018|consensus
Probab=28.89 E-value=4.1e+02 Score=23.46 Aligned_cols=41 Identities=15% Similarity=0.382 Sum_probs=35.6
Q ss_pred HHHHHhhcCeEEEeeC-C--------ceeeccCCCCCHHHHHHHHHHHHH
Q psy6266 172 QVAHMVDKHHVYLLRS-G--------RINMCGLTTQNLDHVAQAIHDAVT 212 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D-~--------r~~y~~l~~~ni~~~~~a~~~~~~ 212 (218)
.+.+.|-.|++-+|+. | |.+..++.....|.++++.+-.++
T Consensus 181 dLL~y~~~~~l~Viss~GaaaksDPTrv~v~Dis~t~~DPlsR~vRrrLr 230 (430)
T KOG2018|consen 181 DLLEYCYNHGLKVISSTGAAAKSDPTRVNVADISETEEDPLSRSVRRRLR 230 (430)
T ss_pred HHHHHHHHcCCceEeccCccccCCCceeehhhccccccCcHHHHHHHHHH
Confidence 7889999999999976 3 788888988999999999888776
No 430
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=28.61 E-value=62 Score=22.17 Aligned_cols=17 Identities=12% Similarity=0.374 Sum_probs=15.8
Q ss_pred HHHHHhhcCeEEEeeCC
Q psy6266 172 QVAHMVDKHHVYLLRSG 188 (218)
Q Consensus 172 ~l~~l~~~~~i~ii~D~ 188 (218)
+|.++|++++|.+++|-
T Consensus 31 ~I~~~A~e~~VPi~~~~ 47 (82)
T TIGR00789 31 RIIEIAKKHGIPIVEDP 47 (82)
T ss_pred HHHHHHHHcCCCEEeCH
Confidence 79999999999999993
No 431
>PLN02970 serine racemase
Probab=28.01 E-value=3.9e+02 Score=22.97 Aligned_cols=49 Identities=10% Similarity=-0.193 Sum_probs=30.2
Q ss_pred EeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEe
Q psy6266 82 QTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYR 132 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~ 132 (218)
..++|+.++.+++.+-. +.--=.|++|+.+-+.-...++..|+ +++.++
T Consensus 80 ~aSsGN~g~alA~~a~~-~G~~~~ivvp~~~~~~k~~~~~~~GA-~Vi~~~ 128 (328)
T PLN02970 80 THSSGNHAAALALAAKL-RGIPAYIVVPKNAPACKVDAVIRYGG-IITWCE 128 (328)
T ss_pred EECCcHHHHHHHHHHHH-cCCCEEEEECCCCCHHHHHHHHhcCC-EEEEeC
Confidence 44556666666554432 22234566666555556678899999 888774
No 432
>TIGR01935 NOT-MenG RraA famliy. This model was initially classified as a "hypothetical equivalog" expressing the tentative hypothesis that all members might have the same function as the E. coli enzyme. Considering the second clade of enterobacterial sequences within this family, that appears to be less tenable. The function of these sequences outside of the narrow RraA equivalog model (TIGR02998) remains obscure. All of these were initially annotated as MenG, AKA S-adenosylmethionine: 2-demethylmenaquinone methyltransferase (EC 2.1.-.-). See the references characterizing this as a case of transitive annotation error in the case of the E. coli protein.
Probab=27.69 E-value=48 Score=25.43 Aligned_cols=78 Identities=13% Similarity=0.113 Sum_probs=48.6
Q ss_pred CCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCc---HHHHHHHhhc
Q psy6266 103 YTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPT---AQQVAHMVDK 179 (218)
Q Consensus 103 gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPT---G~~l~~l~~~ 179 (218)
.+.+-+.+|.|.+|....+.+| ....+.+. . |-..+.++|...++++++++......-+ |..+...+++
T Consensus 9 ~~~~~~~~~~~~~~g~~~~i~G--~A~TV~~~-~-----d~~~~~~ai~~~~~GdVlVid~~g~~~~a~~G~~~~~~a~~ 80 (150)
T TIGR01935 9 PDKVRVLEPMFRNFGGRAAFAG--PIVTVKCF-E-----DNSLVREVLEQPGAGRVLVVDGGGSLRCALLGDNLAVLAEE 80 (150)
T ss_pred cchhcccChhhhhcCCCCEEEE--EEEEEEEE-C-----CcHHHHHHHhcCCCCeEEEEECCCCCceEeehHHHHHHHHH
Confidence 4667788898888876666665 45666553 2 2245677787777888877754322222 2256666666
Q ss_pred CeEE-EeeCC
Q psy6266 180 HHVY-LLRSG 188 (218)
Q Consensus 180 ~~i~-ii~D~ 188 (218)
+++- ++.||
T Consensus 81 ~G~~G~VidG 90 (150)
T TIGR01935 81 NGWEGVIVNG 90 (150)
T ss_pred CCCEEEEEee
Confidence 6543 66675
No 433
>PLN02457 phenylalanine ammonia-lyase
Probab=26.81 E-value=5.6e+02 Score=25.00 Aligned_cols=97 Identities=16% Similarity=0.016 Sum_probs=54.5
Q ss_pred CCCccCchHHHHHHHHHhhcCCCCccCcCCCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHH-HHHH
Q psy6266 21 ECKPWVLPVVRQAEKELAADDSLNHEYLPVLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAE-FLHR 99 (218)
Q Consensus 21 ~~~~~~~~~v~~a~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~-~l~~ 99 (218)
.|++-+.+.||.++..-++. ...+|+..+ +++.+++.+++.. . ..++-|.+ -+.|++|-|.-++. ++..
T Consensus 137 ~g~~lp~~~VRAaMliRlNs--L~~G~SGVr--~evle~L~~lLN~-~-i~PvVP~~----GSVGASGDL~PLAhIAl~L 206 (706)
T PLN02457 137 SGHTLPASATRAAMLVRINT--LLQGYSGIR--FEILEAITKLLNA-N-VTPCLPLR----GTITASGDLVPLSYIAGLL 206 (706)
T ss_pred CCCCCCHHHHHHHHHHHHHH--hccCCCCCC--HHHHHHHHHHHhC-c-CcccCCCC----CCcCccchHHHHHHHHHHH
Confidence 34555566666664433322 345676655 8899999988864 3 22233443 55777775554443 2222
Q ss_pred hcCCCe-EEecCCCchhHHHHHHHhCCCcc
Q psy6266 100 ILNYTT-FYYSKPTWENHRLVFLNAGFTEA 128 (218)
Q Consensus 100 l~~gd~-V~i~~P~y~~y~~~~~~~g~~~~ 128 (218)
+-.|+. ++..+-..-+-...++.+|+ +|
T Consensus 207 ~Geg~~~~v~~~G~~~~a~eAL~~aGl-~P 235 (706)
T PLN02457 207 TGRPNSKAVTPDGEKVTAAEAFKLAGI-EG 235 (706)
T ss_pred cCCCCceeeccCCEEEcHHHHHHHcCC-CC
Confidence 334442 22234444456678899999 75
No 434
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=26.70 E-value=4.3e+02 Score=22.98 Aligned_cols=128 Identities=9% Similarity=0.044 Sum_probs=61.5
Q ss_pred CCCcHHHHHHHHHHhcCCCCCCCcCCCceEEEEeccChhHHHHHHHHHHHhcCCCeE--EecCCCch------hHHHHHH
Q psy6266 50 VLGLESFSSAATRMLLGGDASPPLREGRAFGVQTLSGTGALRVGAEFLHRILNYTTF--YYSKPTWE------NHRLVFL 121 (218)
Q Consensus 50 ~~G~~~lr~aia~~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~l~~gd~V--~i~~P~y~------~y~~~~~ 121 (218)
..+-.+|++.+. ++.+ ..+.. .+ + ++-.+||.....++..+...+ |..+ +..++.|. +-..+++
T Consensus 39 ~~~~~~l~~l~~-~~k~-~~~~~--yD-~-iV~lSGGkDSs~la~ll~~~~--gl~~l~vt~~~~~~~e~~~~n~~~~~~ 110 (343)
T TIGR03573 39 DEREKELEELVD-KIKK-KGGGR--YD-C-IIGVSGGKDSTYQAHVLKKKL--GLNPLLVTVDPGWNTELGVKNLNNLIK 110 (343)
T ss_pred HHHHHHHHHHHH-HHHh-cCCCC--CC-E-EEECCCCHHHHHHHHHHHHHh--CCceEEEEECCCCCCHHHHHHHHHHHH
Confidence 345566766444 4433 32211 12 3 345567666665553332222 4333 35577765 2334455
Q ss_pred HhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH----HHHHHhhcCeEEEeeCC---ceeecc
Q psy6266 122 NAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ----QVAHMVDKHHVYLLRSG---RINMCG 194 (218)
Q Consensus 122 ~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~----~l~~l~~~~~i~ii~D~---r~~y~~ 194 (218)
..|. ....+. ++.+.+++....... -...|.-++.. .+.++|+++++-+|..| .+.|.|
T Consensus 111 ~lgv-d~~~i~--------~d~~~~~~l~~~~~~-----~~~~pc~~c~~~~~~~l~~~A~~~gi~~Il~G~~~dE~fgG 176 (343)
T TIGR03573 111 KLGF-DLHTIT--------INPETFRKLQRAYFK-----KVGDPEWPQDHAIFASVYQVALKFNIPLIIWGENIAEEYGG 176 (343)
T ss_pred HcCC-CeEEEe--------CCHHHHHHHHHHHHh-----ccCCCchhhhhHHHHHHHHHHHHhCCCEEEeCCCHHHhcCC
Confidence 5666 444442 233333332221100 01122233332 57789999999888777 466666
Q ss_pred CCCCC
Q psy6266 195 LTTQN 199 (218)
Q Consensus 195 l~~~n 199 (218)
....+
T Consensus 177 y~~~~ 181 (343)
T TIGR03573 177 DSEEE 181 (343)
T ss_pred ccccc
Confidence 54443
No 435
>PF15608 PELOTA_1: PELOTA RNA binding domain
Probab=26.29 E-value=1.6e+02 Score=21.01 Aligned_cols=48 Identities=8% Similarity=0.084 Sum_probs=34.0
Q ss_pred HHHHHHHhcCCCCcEEEEcccCCCCcHHHHHHHhhcCeEEEeeCCceeecc
Q psy6266 144 TGMYEDLVNAPDNSVIILHACAHNPTAQQVAHMVDKHHVYLLRSGRINMCG 194 (218)
Q Consensus 144 ~~~~~~l~~~~~~~~iil~~~p~NPTG~~l~~l~~~~~i~ii~D~r~~y~~ 194 (218)
+..+..|+..+ -++++ ..+.||-=.-|..||+++++.+...+.+.|+.
T Consensus 46 EaTRvLLRRvP--~~vLV-r~~~~pd~~Hl~~LA~ekgVpVe~~~d~~Y~a 93 (100)
T PF15608_consen 46 EATRVLLRRVP--WKVLV-RDPDDPDLAHLLLLAEEKGVPVEVYPDLPYSA 93 (100)
T ss_pred HHHHHHHhcCC--CEEEE-CCCCCccHHHHHHHHHHcCCcEEEeCCCCeEE
Confidence 44555565432 34444 57899977789999999999887766688774
No 436
>TIGR03599 YloV DAK2 domain fusion protein YloV. This model describes a protein family that contains an N-terminal DAK2 domain (pfam02734), so named because of similarity to the dihydroxyacetone kinase family family. The GTP-binding protein CgtA (a member of the obg family) is a bacterial GTPase associated with ribosome biogenesis, and it has a characteristic extension (TIGR03595) in certain lineages. This protein family described here was found, by the method of partial phylognetic profiling, to have a phylogenetic distribution strongly correlated to that of TIGR03595. This correlation implies some form of functional coupling.
Probab=25.71 E-value=4e+02 Score=24.95 Aligned_cols=97 Identities=12% Similarity=0.161 Sum_probs=54.7
Q ss_pred EEecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH----HHHHHhhcCe
Q psy6266 106 FYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ----QVAHMVDKHH 181 (218)
Q Consensus 106 V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~----~l~~l~~~~~ 181 (218)
++.-.|+-. ...+|+..|+ ..+-- - .....+..+.+.+++++...+.++++ |||+-=. |.+++. +++
T Consensus 317 ivAv~~g~g-~~~~f~~~Ga-~~vi~-g--gqt~nPS~~dll~ai~~~~a~~V~iL---PNn~nii~aA~qa~~~~-~~~ 387 (530)
T TIGR03599 317 IVAVAPGEG-IAELFKSLGA-DVVIE-G--GQTMNPSTEDILKAIEKVNAKNVFVL---PNNKNIILAAEQAAELA-DKN 387 (530)
T ss_pred EEEEcCCch-HHHHHHHCCC-CEEEe-C--CCCCCCCHHHHHHHHHhCCCCeEEEe---cCCccHHHHHHHHHHHh-CCc
Confidence 333344433 4578899998 54332 1 22234566788888887644445444 5665433 666664 678
Q ss_pred EEEeeCCc--------eeeccCCCCCHHHHHHHHHHHHHc
Q psy6266 182 VYLLRSGR--------INMCGLTTQNLDHVAQAIHDAVTS 213 (218)
Q Consensus 182 i~ii~D~r--------~~y~~l~~~ni~~~~~a~~~~~~~ 213 (218)
+.||.-.. .+|. -..+++...++..++..+
T Consensus 388 v~vvpT~s~~qgiaAl~~fd--p~~~~~~n~~~M~ea~~~ 425 (530)
T TIGR03599 388 VVVIPTKTIVQGLAALLVFD--PEASLEDNKEAMEEAIKA 425 (530)
T ss_pred EEEEeCCCHHHHHHHHHhhC--CCCCHHHHHHHHHHHHhc
Confidence 88887631 1111 123566667766666554
No 437
>PF10417 1-cysPrx_C: C-terminal domain of 1-Cys peroxiredoxin; InterPro: IPR019479 This entry represents the C-terminal domain of 1-Cys peroxiredoxin, a member of the peroxiredoxin superfamily which protect cells against membrane oxidation through glutathione (GSH)-dependent reduction of phospholipid hydroperoxides to corresponding alcohols []. The C-terminal domain is crucial for providing the extra cysteine necessary for dimerisation of the whole molecule. Loss of the enzyme's peroxidase activity is associated with oxidation of the catalytic cysteine found upstream of this domain. Glutathionylation, presumably through its disruption of protein structure, facilitates access for GSH, resulting in spontaneous reduction of the mixed disulphide to the sulphydryl and consequent activation of the enzyme []. The domain is associated with IPR000866 from INTERPRO, which carries the catalytic cysteine. ; GO: 0051920 peroxiredoxin activity, 0055114 oxidation-reduction process; PDB: 1ZOF_E 2H01_A 3EMP_D 1YF1_G 1YF0_D 1N8J_C 1YEP_D 1YEX_D 2V41_H 2V32_C ....
Probab=25.51 E-value=32 Score=20.04 Aligned_cols=14 Identities=7% Similarity=-0.150 Sum_probs=10.0
Q ss_pred hcCCCeEEecCCCc
Q psy6266 100 ILNYTTFYYSKPTW 113 (218)
Q Consensus 100 l~~gd~V~i~~P~y 113 (218)
|.|||.+++++|.=
T Consensus 16 W~pGd~~ivpp~~s 29 (40)
T PF10417_consen 16 WKPGDDVIVPPPVS 29 (40)
T ss_dssp TCTTSGEBE-TTSS
T ss_pred CCCCCCeEcCCCCC
Confidence 56899999887753
No 438
>COG1658 Small primase-like proteins (Toprim domain) [DNA replication, recombination, and repair]
Probab=24.41 E-value=3e+02 Score=20.49 Aligned_cols=60 Identities=15% Similarity=0.169 Sum_probs=36.3
Q ss_pred cHHHHHHHHhcCCCCcEEEEcccCCCCcHH--HHHHHhhcCeEEEeeCCceeeccCCCCCHHHHHHHHHHHHHc
Q psy6266 142 DFTGMYEDLVNAPDNSVIILHACAHNPTAQ--QVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIHDAVTS 213 (218)
Q Consensus 142 d~~~~~~~l~~~~~~~~iil~~~p~NPTG~--~l~~l~~~~~i~ii~D~r~~y~~l~~~ni~~~~~a~~~~~~~ 213 (218)
|...+++... ...+.++.+..|+.-. .+....+.++++|+.| --+.| +.++..|.+.|.+
T Consensus 20 D~~~l~~~~~----~~~i~~~g~~i~~~~~ie~i~~~~~~k~VIILTD--~D~~G------e~Irk~l~~~l~~ 81 (127)
T COG1658 20 DTASLKRLGD----AGVIITNGSAINSLETIELIKKAQKYKGVIILTD--PDRKG------ERIRKKLKEYLPG 81 (127)
T ss_pred HHHHHHHhcC----CceEEEcCCccchHHHHHHHHHhhccCCEEEEeC--CCcch------HHHHHHHHHHhcc
Confidence 5566655442 2344555555554332 3444445678999988 66655 6777777777765
No 439
>KOG2741|consensus
Probab=24.33 E-value=2e+02 Score=25.38 Aligned_cols=71 Identities=10% Similarity=0.132 Sum_probs=40.2
Q ss_pred CCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEEEcccCCCCcHH-HHHHHhhcCeEEEeeC
Q psy6266 110 KPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVIILHACAHNPTAQ-QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 110 ~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~iil~~~p~NPTG~-~l~~l~~~~~i~ii~D 187 (218)
.-.|++|+..++.--. ++++++.... ...+-..-+|.. .|.++.-=+-+.|-+-. +|.+.|++++++++.-
T Consensus 58 ~k~y~syEeLakd~~v-DvVyi~~~~~----qH~evv~l~l~~--~K~VL~EKPla~n~~e~~~iveaA~~rgv~~meg 129 (351)
T KOG2741|consen 58 PKAYGSYEELAKDPEV-DVVYISTPNP----QHYEVVMLALNK--GKHVLCEKPLAMNVAEAEEIVEAAEARGVFFMEG 129 (351)
T ss_pred CccccCHHHHhcCCCc-CEEEeCCCCc----cHHHHHHHHHHc--CCcEEecccccCCHHHHHHHHHHHHHcCcEEEee
Confidence 4458888887777766 7777765322 244444444442 22322222333444333 7888888888777664
No 440
>cd01017 AdcA Metal binding protein AcdA. These proteins have been shown to function in the ABC uptake of Zn2+ and Mn2+ and in competence for genetic transformation and adhesion. The AcdA proteins belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and they bind their ligand in the cleft between these domains. In addition, many of these proteins have a low complexity region containing metal binding histidine-rich motif (repetitive HDH sequence).
Probab=24.05 E-value=1.8e+02 Score=24.28 Aligned_cols=74 Identities=11% Similarity=0.066 Sum_probs=39.5
Q ss_pred CCCeEEecCCCchhHHHHHHHhCCCcceeEeccCCcCccc---cHHHHHHHHhcCCCCcEEEEcccCCCCcHHHHHHHhh
Q psy6266 102 NYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAV---DFTGMYEDLVNAPDNSVIILHACAHNPTAQQVAHMVD 178 (218)
Q Consensus 102 ~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~---d~~~~~~~l~~~~~~~~iil~~~p~NPTG~~l~~l~~ 178 (218)
++..+++.-|.|.-+ ++..|+ +++.+.-. .....+ ++..+.+.+++. .-++++..+.. + ...+..+++
T Consensus 170 ~~~~~v~~H~af~Y~---~~~~gl-~~~~~~~~-~~~~eps~~~l~~l~~~ik~~-~v~~if~e~~~--~-~~~~~~la~ 240 (282)
T cd01017 170 KGKTFVTQHAAFGYL---ARRYGL-KQIAIVGV-SPEVEPSPKQLAELVEFVKKS-DVKYIFFEENA--S-SKIAETLAK 240 (282)
T ss_pred CCCeEEEecccHHHH---HHHCCC-eEEecccC-CCCCCCCHHHHHHHHHHHHHc-CCCEEEEeCCC--C-hHHHHHHHH
Confidence 478899999988733 477888 66553211 122344 455555555542 23344443322 2 233445666
Q ss_pred cCeEEE
Q psy6266 179 KHHVYL 184 (218)
Q Consensus 179 ~~~i~i 184 (218)
+.++-+
T Consensus 241 ~~g~~v 246 (282)
T cd01017 241 ETGAKL 246 (282)
T ss_pred HcCCcE
Confidence 766543
No 441
>PF01248 Ribosomal_L7Ae: Ribosomal protein L7Ae/L30e/S12e/Gadd45 family; InterPro: IPR004038 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, ribosomal protein L30 from eukaryotes and archaebacteria, Gadd45 and MyD118 [].; PDB: 2CZW_A 3V7E_B 2QEX_F 1YJ9_F 1VQ8_F 1YJN_F 3I56_F 1VQ6_F 2OTJ_F 1YIJ_F ....
Probab=23.64 E-value=2.4e+02 Score=19.10 Aligned_cols=44 Identities=11% Similarity=0.286 Sum_probs=27.9
Q ss_pred cHHHHHHHHhcCCCCcEEEEcccCCCCcH-HH-HHHHhhcCeEEEeeC
Q psy6266 142 DFTGMYEDLVNAPDNSVIILHACAHNPTA-QQ-VAHMVDKHHVYLLRS 187 (218)
Q Consensus 142 d~~~~~~~l~~~~~~~~iil~~~p~NPTG-~~-l~~l~~~~~i~ii~D 187 (218)
.++...+.+... +...+++ ..-.+|.- .+ +..+|++++|.++.=
T Consensus 19 G~~~v~k~l~~~-~~~lvil-A~d~~~~~~~~~l~~~c~~~~Ip~~~~ 64 (95)
T PF01248_consen 19 GIKEVLKALKKG-KAKLVIL-AEDCSPDSIKKHLPALCEEKNIPYVFV 64 (95)
T ss_dssp SHHHHHHHHHTT-CESEEEE-ETTSSSGHHHHHHHHHHHHTTEEEEEE
T ss_pred chHHHHHHHHcC-CCcEEEE-cCCCChhhhcccchhheeccceeEEEE
Confidence 567777777653 3334444 33444443 46 888999999988764
No 442
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=23.01 E-value=1.1e+02 Score=26.54 Aligned_cols=44 Identities=9% Similarity=0.303 Sum_probs=30.8
Q ss_pred cHHHHHHHHhc-CCCCcEEEEcccCCCCcHH------HHHHHhhcCeEEEeeC
Q psy6266 142 DFTGMYEDLVN-APDNSVIILHACAHNPTAQ------QVAHMVDKHHVYLLRS 187 (218)
Q Consensus 142 d~~~~~~~l~~-~~~~~~iil~~~p~NPTG~------~l~~l~~~~~i~ii~D 187 (218)
+++.+.+.+.+ ..+..++++. .+=|.|. +|.+++++.+..++-|
T Consensus 115 ~~~~~l~~~~~~l~~~d~Vvls--GSlP~g~~~d~y~~li~~~~~~g~~vilD 165 (310)
T COG1105 115 ELEQFLEQLKALLESDDIVVLS--GSLPPGVPPDAYAELIRILRQQGAKVILD 165 (310)
T ss_pred HHHHHHHHHHHhcccCCEEEEe--CCCCCCCCHHHHHHHHHHHHhcCCeEEEE
Confidence 46666666665 3455666664 3447665 7889999999999988
No 443
>COG0396 sufC Cysteine desulfurase activator ATPase [Posttranslational modification, protein turnover, chaperones]
Probab=22.96 E-value=3.4e+02 Score=22.77 Aligned_cols=69 Identities=17% Similarity=0.235 Sum_probs=44.2
Q ss_pred HHHHHhCCCcceeEeccCCcCccccHHHHHHH---HhcC--CCCcEEEEcccCCCCcHHHHHHHhhcCeEEEeeCCceee
Q psy6266 118 LVFLNAGFTEAREYRYWNPEKRAVDFTGMYED---LVNA--PDNSVIILHACAHNPTAQQVAHMVDKHHVYLLRSGRINM 192 (218)
Q Consensus 118 ~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~---l~~~--~~~~~iil~~~p~NPTG~~l~~l~~~~~i~ii~D~r~~y 192 (218)
.++++.-+ +|...=+ ++.+.++|+++++-. +.+. ....++++- |+ .+|.+..+--.++|+.|||++-
T Consensus 154 EilQ~~~l-ePkl~IL-DE~DSGLDIdalk~V~~~i~~lr~~~~~~liIT---Hy---~rll~~i~pD~vhvl~~GrIv~ 225 (251)
T COG0396 154 EILQLLLL-EPKLAIL-DEPDSGLDIDALKIVAEGINALREEGRGVLIIT---HY---QRLLDYIKPDKVHVLYDGRIVK 225 (251)
T ss_pred HHHHHHhc-CCCEEEe-cCCCcCccHHHHHHHHHHHHHHhcCCCeEEEEe---cH---HHHHhhcCCCEEEEEECCEEEe
Confidence 46666667 7777655 344578898887532 2221 233444442 55 3677777666799999999997
Q ss_pred cc
Q psy6266 193 CG 194 (218)
Q Consensus 193 ~~ 194 (218)
+|
T Consensus 226 sG 227 (251)
T COG0396 226 SG 227 (251)
T ss_pred cC
Confidence 76
No 444
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=22.92 E-value=1.7e+02 Score=21.06 Aligned_cols=56 Identities=11% Similarity=0.071 Sum_probs=28.6
Q ss_pred CCeEEecCCC--------chhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEE
Q psy6266 103 YTTFYYSKPT--------WENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVII 160 (218)
Q Consensus 103 gd~V~i~~P~--------y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~ii 160 (218)
-+.|+-..|- +..-...++.+|+ ..+.+|........-+++.+.+.+.+. ++++++
T Consensus 28 fktVInlRpd~E~~~qp~~~~~~~~a~~~Gl-~y~~iPv~~~~~~~~~v~~f~~~l~~~-~~Pvl~ 91 (110)
T PF04273_consen 28 FKTVINLRPDGEEPGQPSSAEEAAAAEALGL-QYVHIPVDGGAITEEDVEAFADALESL-PKPVLA 91 (110)
T ss_dssp --EEEE-S-TTSTTT-T-HHCHHHHHHHCT--EEEE----TTT--HHHHHHHHHHHHTT-TTSEEE
T ss_pred CcEEEECCCCCCCCCCCCHHHHHHHHHHcCC-eEEEeecCCCCCCHHHHHHHHHHHHhC-CCCEEE
Confidence 3566555443 3334467889999 899998843322222778888888875 455533
No 445
>KOG2550|consensus
Probab=22.05 E-value=4.7e+02 Score=23.88 Aligned_cols=115 Identities=14% Similarity=0.139 Sum_probs=62.6
Q ss_pred ccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEeccCC-cCccccHHHHHHHHhcC--------C
Q psy6266 84 LSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYRYWNP-EKRAVDFTGMYEDLVNA--------P 154 (218)
Q Consensus 84 ~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~~~~~l~~~--------~ 154 (218)
.|..+.-..-+.++ ..+|..|++.+-+-++-.-.+++.-- .-..||-..- ...-..-+..++.|.+- -
T Consensus 246 iGTre~dK~rl~ll--~~aGvdvviLDSSqGnS~~qiemik~-iK~~yP~l~ViaGNVVT~~qa~nLI~aGaDgLrVGMG 322 (503)
T KOG2550|consen 246 IGTRDDDKERLDLL--VQAGVDVVILDSSQGNSIYQLEMIKY-IKETYPDLQIIAGNVVTKEQAANLIAAGADGLRVGMG 322 (503)
T ss_pred cccccchhHHHHHh--hhcCCcEEEEecCCCcchhHHHHHHH-HHhhCCCceeeccceeeHHHHHHHHHccCceeEeccc
Confidence 34444444444444 35788888888887764433443322 1222332110 11122344444444431 1
Q ss_pred CCcEEEEc--ccCCCCcHH---HHHHHhhcCeEEEeeCCceeeccCCCCCHHHHHHHHH
Q psy6266 155 DNSVIILH--ACAHNPTAQ---QVAHMVDKHHVYLLRSGRINMCGLTTQNLDHVAQAIH 208 (218)
Q Consensus 155 ~~~~iil~--~~p~NPTG~---~l~~l~~~~~i~ii~D~r~~y~~l~~~ni~~~~~a~~ 208 (218)
.+++.+.+ .-+.-|-|. +++++|..+++.+|+|| -..|+.++++||.
T Consensus 323 sGSiCiTqevma~GrpQ~TAVy~va~~A~q~gvpviADG-------Giq~~Ghi~KAl~ 374 (503)
T KOG2550|consen 323 SGSICITQKVMACGRPQGTAVYKVAEFANQFGVPCIADG-------GIQNVGHVVKALG 374 (503)
T ss_pred cCceeeeceeeeccCCcccchhhHHHHHHhcCCceeecC-------CcCccchhHhhhh
Confidence 23444443 234556565 78899999999999996 2367778888753
No 446
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=21.42 E-value=4.1e+02 Score=20.96 Aligned_cols=90 Identities=13% Similarity=0.102 Sum_probs=45.4
Q ss_pred ccChh--HHHHHHHHHHHhcCCCeE-EecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEEE
Q psy6266 84 LSGTG--ALRVGAEFLHRILNYTTF-YYSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVII 160 (218)
Q Consensus 84 ~G~~~--al~~~~~~l~~l~~gd~V-~i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~ii 160 (218)
.|++| +..++-.++. .+-+| .+..+.=......++..|+ +++..++ .|.+.+.++++. -..++
T Consensus 4 ~GatG~~G~~v~~~L~~---~~~~V~~l~R~~~~~~~~~l~~~g~-~vv~~d~-------~~~~~l~~al~g---~d~v~ 69 (233)
T PF05368_consen 4 TGATGNQGRSVVRALLS---AGFSVRALVRDPSSDRAQQLQALGA-EVVEADY-------DDPESLVAALKG---VDAVF 69 (233)
T ss_dssp ETTTSHHHHHHHHHHHH---TTGCEEEEESSSHHHHHHHHHHTTT-EEEES-T-------T-HHHHHHHHTT---CSEEE
T ss_pred ECCccHHHHHHHHHHHh---CCCCcEEEEeccchhhhhhhhcccc-eEeeccc-------CCHHHHHHHHcC---CceEE
Confidence 45444 5555443332 34333 3344442223345667787 6665433 166888888863 34445
Q ss_pred EcccCCCCcHH----HHHHHhhcCe--EEEeeC
Q psy6266 161 LHACAHNPTAQ----QVAHMVDKHH--VYLLRS 187 (218)
Q Consensus 161 l~~~p~NPTG~----~l~~l~~~~~--i~ii~D 187 (218)
+...+.++... .+.+.|++.+ .++.++
T Consensus 70 ~~~~~~~~~~~~~~~~li~Aa~~agVk~~v~ss 102 (233)
T PF05368_consen 70 SVTPPSHPSELEQQKNLIDAAKAAGVKHFVPSS 102 (233)
T ss_dssp EESSCSCCCHHHHHHHHHHHHHHHT-SEEEESE
T ss_pred eecCcchhhhhhhhhhHHHhhhccccceEEEEE
Confidence 44333446554 5667776643 345554
No 447
>PF13941 MutL: MutL protein
Probab=20.69 E-value=6.7e+02 Score=23.06 Aligned_cols=39 Identities=15% Similarity=0.256 Sum_probs=29.4
Q ss_pred HHHHHhhc-CeEEEeeCCceeeccCCCCCHHHHHHHHHHHHH
Q psy6266 172 QVAHMVDK-HHVYLLRSGRINMCGLTTQNLDHVAQAIHDAVT 212 (218)
Q Consensus 172 ~l~~l~~~-~~i~ii~D~r~~y~~l~~~ni~~~~~a~~~~~~ 212 (218)
++.++.++ ..=+++.| -+|-.+..-|++...++|+++|.
T Consensus 169 ~v~~il~~~~~~~~~~~--NV~P~i~~ln~~paR~~I~~~F~ 208 (457)
T PF13941_consen 169 EVEEILEKAGKEVVITE--NVMPKIDVLNVEPAREAIREVFL 208 (457)
T ss_pred HHHHHHHhCCCCEEEeC--CCCCCCCCcChHHHHHHHHHHHH
Confidence 67777763 22334455 68889999999999999999975
No 448
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.59 E-value=2.3e+02 Score=21.14 Aligned_cols=50 Identities=14% Similarity=0.116 Sum_probs=34.5
Q ss_pred ecCCCchhHHHHHHHhCCCcceeEeccCCcCccccHHHHHHHHhcCCCCcEE
Q psy6266 108 YSKPTWENHRLVFLNAGFTEAREYRYWNPEKRAVDFTGMYEDLVNAPDNSVI 159 (218)
Q Consensus 108 i~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~i 159 (218)
-.-|.+-.-...++.+|+ ...++|.....-..-|++.+.+++.+. .++++
T Consensus 42 ~~QP~~~~i~~aa~~aGl-~y~~iPV~~~~iT~~dV~~f~~Al~ea-egPVl 91 (130)
T COG3453 42 PGQPGFAAIAAAAEAAGL-TYTHIPVTGGGITEADVEAFQRALDEA-EGPVL 91 (130)
T ss_pred CCCCChHHHHHHHHhcCC-ceEEeecCCCCCCHHHHHHHHHHHHHh-CCCEE
Confidence 345666666678889999 888888753322233899999999875 55653
No 449
>TIGR00093 pseudouridine synthase. This model identifies panels of pseudouridine synthase enzymes that RNA modifications involved in maturing the protein translation apparatus. Counts per genome vary: two in Staphylococcus aureus, three in Pseudomonas putida, four in E. coli, etc.
Probab=20.49 E-value=47 Score=24.40 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=29.1
Q ss_pred CcHH--HHHHHhhcCeEEEeeCCceeeccCCCCCHH
Q psy6266 168 PTAQ--QVAHMVDKHHVYLLRSGRINMCGLTTQNLD 201 (218)
Q Consensus 168 PTG~--~l~~l~~~~~i~ii~D~r~~y~~l~~~ni~ 201 (218)
-||. ||...+...+..|+.|.|..|..+..+++.
T Consensus 84 ~tGR~HQIR~~~~~lG~pI~g~~R~~~g~~~l~~L~ 119 (128)
T TIGR00093 84 SEGRNRQVRRMFAAVGFPVLRLHRVRIGDVSLNGLP 119 (128)
T ss_pred eCCCCHHHHHHHHHcCCeEeEEEEEEECCEEcCCCC
Confidence 4566 999999999999999999999998877663
No 450
>KOG3074|consensus
Probab=20.42 E-value=68 Score=26.60 Aligned_cols=18 Identities=33% Similarity=0.626 Sum_probs=16.2
Q ss_pred CcCCCCcHHHHHHHHHHh
Q psy6266 47 YLPVLGLESFSSAATRML 64 (218)
Q Consensus 47 Y~~~~G~~~lr~aia~~~ 64 (218)
-.|.+|+.+||.++++++
T Consensus 148 alPaqG~aEfrdaLaell 165 (263)
T KOG3074|consen 148 ALPAQGIAEFRDALAELL 165 (263)
T ss_pred eccchhHHHHHHHHHHHH
Confidence 457899999999999998
No 451
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=20.13 E-value=2.6e+02 Score=25.65 Aligned_cols=16 Identities=0% Similarity=0.162 Sum_probs=7.5
Q ss_pred HHHHHhhcC--eEEEeeC
Q psy6266 172 QVAHMVDKH--HVYLLRS 187 (218)
Q Consensus 172 ~l~~l~~~~--~i~ii~D 187 (218)
++++.+|++ ++.||.=
T Consensus 81 ~~~~~~k~~~P~~~iV~G 98 (497)
T TIGR02026 81 ETLKFARERLPNAIIVLG 98 (497)
T ss_pred HHHHHHHHHCCCCEEEEc
Confidence 444444443 4544443
No 452
>PRK07476 eutB threonine dehydratase; Provisional
Probab=20.10 E-value=5.5e+02 Score=21.90 Aligned_cols=49 Identities=14% Similarity=-0.020 Sum_probs=30.3
Q ss_pred EeccChhHHHHHHHHHHHhcCCCeEEecCCCchhHHHHHHHhCCCcceeEe
Q psy6266 82 QTLSGTGALRVGAEFLHRILNYTTFYYSKPTWENHRLVFLNAGFTEAREYR 132 (218)
Q Consensus 82 ~t~G~~~al~~~~~~l~~l~~gd~V~i~~P~y~~y~~~~~~~g~~~~~~~~ 132 (218)
..++|+.+..+++.+-. +.--=.|++|+..-+.-...++..|+ +++.++
T Consensus 72 ~aSsGN~g~alA~~a~~-~G~~~~i~vp~~~~~~k~~~~~~~GA-~V~~~~ 120 (322)
T PRK07476 72 TASTGNHGRALAYAARA-LGIRATICMSRLVPANKVDAIRALGA-EVRIVG 120 (322)
T ss_pred EECCChHHHHHHHHHHH-hCCCEEEEeCCCCCHHHHHHHHHcCC-EEEEEC
Confidence 44566666666655432 32224555555555566778899999 888774
Done!