Query psy6269
Match_columns 366
No_of_seqs 134 out of 1659
Neff 9.1
Searched_HMMs 29240
Date Fri Aug 16 22:04:53 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6269.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6269hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 3.3E-40 1.1E-44 326.6 8.4 291 1-336 102-495 (510)
2 3vw7_A Proteinase-activated re 100.0 7.1E-36 2.4E-40 292.5 9.0 130 1-131 85-224 (484)
3 3uon_A Human M2 muscarinic ace 100.0 8.8E-35 3E-39 283.3 10.3 288 1-334 88-464 (467)
4 2rh1_A Beta-2-adrenergic recep 100.0 2.2E-33 7.6E-38 276.9 18.9 127 1-128 105-239 (500)
5 3eml_A Human adenosine A2A rec 100.0 3.8E-34 1.3E-38 280.2 11.6 291 1-336 84-475 (488)
6 3pbl_A D(3) dopamine receptor, 100.0 1.5E-33 5E-38 275.8 11.3 279 1-327 104-471 (481)
7 4eiy_A Adenosine receptor A2A/ 100.0 1.9E-34 6.6E-39 279.3 5.1 291 1-336 94-434 (447)
8 3rze_A Histamine H1 receptor, 100.0 4.2E-33 1.4E-37 270.3 13.4 285 1-331 73-446 (452)
9 3odu_A C-X-C chemokine recepto 100.0 1.3E-34 4.5E-39 284.7 2.6 131 1-132 111-246 (502)
10 4dkl_A MU-type opioid receptor 100.0 4.4E-34 1.5E-38 277.9 5.9 132 1-133 81-219 (464)
11 3v2y_A Sphingosine 1-phosphate 100.0 4E-32 1.4E-36 269.2 17.1 122 1-126 127-250 (520)
12 2z73_A Rhodopsin; visual pigme 100.0 2E-31 6.9E-36 258.9 19.4 226 1-328 100-332 (448)
13 2ks9_A Substance-P receptor; w 100.0 2.5E-31 8.6E-36 250.9 15.1 215 1-328 97-322 (364)
14 4amj_A Beta-1 adrenergic recep 100.0 7.5E-31 2.6E-35 241.8 16.1 217 1-327 76-300 (315)
15 1u19_A Rhodopsin; G protein-co 100.0 9.8E-32 3.3E-36 251.7 8.4 212 1-327 103-323 (349)
16 2lnl_A C-X-C chemokine recepto 100.0 1.6E-30 5.6E-35 238.7 16.1 203 1-327 74-293 (296)
17 4ea3_A Fusion protein of nocic 100.0 3.1E-30 1.1E-34 249.8 16.6 215 1-330 189-412 (434)
18 3sn6_R Lysozyme, beta-2 adrene 100.0 5.4E-30 1.9E-34 253.4 18.3 236 1-327 247-490 (514)
19 1hll_A Alpha-2A adrenergic rec 98.4 4.6E-08 1.6E-12 57.5 1.3 27 22-48 2-28 (32)
20 2ki9_A Cannabinoid receptor 2; 98.1 4.1E-07 1.4E-11 53.7 -0.5 30 208-237 1-30 (33)
21 2lnl_A C-X-C chemokine recepto 98.1 1.5E-06 5.2E-11 78.5 3.0 45 260-305 22-66 (296)
22 2koe_A Human cannabinoid recep 98.0 8.4E-07 2.9E-11 54.8 0.6 36 248-327 2-37 (40)
23 4grv_A Neurotensin receptor ty 97.9 5.1E-06 1.8E-10 81.4 3.7 66 261-326 44-113 (510)
24 2rh1_A Beta-2-adrenergic recep 97.9 7.1E-06 2.4E-10 80.1 3.9 50 258-307 49-98 (500)
25 3v2y_A Sphingosine 1-phosphate 97.8 8.6E-06 3E-10 80.0 3.3 48 260-307 74-121 (520)
26 4eiy_A Adenosine receptor A2A/ 97.8 1.2E-05 4.2E-10 76.6 4.0 58 251-308 33-90 (447)
27 3odu_A C-X-C chemokine recepto 97.7 1.6E-05 5.6E-10 77.0 4.5 62 246-308 45-106 (502)
28 4amj_A Beta-1 adrenergic recep 97.7 1.2E-05 4.2E-10 72.6 2.7 57 251-307 13-69 (315)
29 2ks9_A Substance-P receptor; w 97.7 2.3E-05 7.8E-10 72.7 4.5 48 260-307 43-90 (364)
30 1u19_A Rhodopsin; G protein-co 97.7 2.6E-05 8.9E-10 71.7 4.7 52 256-307 45-96 (349)
31 3eml_A Human adenosine A2A rec 97.7 1.9E-05 6.5E-10 76.2 3.6 51 258-308 30-80 (488)
32 3uon_A Human M2 muscarinic ace 97.7 1.9E-05 6.7E-10 75.7 3.5 53 255-307 29-81 (467)
33 4dkl_A MU-type opioid receptor 97.7 2.1E-05 7.2E-10 75.3 3.6 57 250-307 18-74 (464)
34 3vw7_A Proteinase-activated re 97.6 2.4E-05 8.1E-10 75.5 3.6 58 248-306 19-76 (484)
35 3rze_A Histamine H1 receptor, 97.6 1.2E-05 4E-10 77.0 1.3 65 259-324 18-82 (452)
36 3sn6_R Lysozyme, beta-2 adrene 97.6 2.3E-05 7.7E-10 76.7 2.8 59 249-307 182-240 (514)
37 2z73_A Rhodopsin; visual pigme 97.6 5.4E-05 1.9E-09 72.5 5.1 59 248-306 33-92 (448)
38 4ea3_A Fusion protein of nocic 97.5 5.2E-05 1.8E-09 72.4 4.0 58 249-307 125-182 (434)
39 3pbl_A D(3) dopamine receptor, 97.5 3.2E-05 1.1E-09 74.5 2.5 44 264-307 53-96 (481)
40 2ket_A Cathelicidin-6; antimic 50.7 9.4 0.00032 19.6 1.7 14 316-329 4-17 (27)
41 2rdd_B UPF0092 membrane protei 48.6 27 0.00092 20.2 3.8 27 105-131 6-33 (37)
42 2jx4_A Vasopressin V2 receptor 27.8 75 0.0026 19.8 3.7 13 115-127 2-14 (52)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=3.3e-40 Score=326.61 Aligned_cols=291 Identities=17% Similarity=0.219 Sum_probs=180.2
Q ss_pred CccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhhhhhccCccCccccchhhHHHHHHHHHHHHHHHhhhhhhhccccC
Q psy6269 1 SWEFGWILCDIWVSLDVCLCTASILSLCAISIDRYLAVTQPLTYSRKTRSKKLALYMILCVWVLALVITCPPILGWYDKD 80 (366)
Q Consensus 1 ~W~~g~~~C~~~~~l~~~~~~~S~~~l~~IaidRY~aV~~Pl~y~~~~~t~~~a~~~i~~~Wi~s~l~~~p~~~~~~~~~ 80 (366)
+|+||+.+|+++.++..++.++|++++++||+|||+||++|++|+..+ +++++..+++++|++++++++|+++++....
T Consensus 102 ~w~~g~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~-t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~ 180 (510)
T 4grv_A 102 PWAFGDAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLM-SRSRTKKFISAIWLASALLAIPMLFTMGLQN 180 (510)
T ss_dssp SCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCC-CCSCCHHHHHHHHHHHHHHHTTHHHHEEEEE
T ss_pred CEEhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccc-cccccceeehHHHHHHHHHHHHHHHhhcccc
Confidence 499999999999999999999999999999999999999999998887 8888999999999999999999999874322
Q ss_pred CC------CCCcccccCC----cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccch---------
Q psy6269 81 RH------RDKRCGYNQN----RGYVVFSGMGSFFIPLLVVLYVYARISCVIARRHNNLEALNHQHTLGRH--------- 141 (366)
Q Consensus 81 ~~------~~~~C~~~~~----~~~~~~~~~~~~~lP~~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~~~--------- 141 (366)
.. +...|...+. ..|..+..++.|++|+++|+++|++|+++++++.+........+....+
T Consensus 181 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (510)
T 4grv_A 181 RSADGTHPGGLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMVNIFEMLRIDEGLRLKIYKDTEGYY 260 (510)
T ss_dssp CSSSSCCGGGEEEEECSCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSCTHHHHHHHHTCCEEEEEECTTSCE
T ss_pred cccCCCCCCccccccccccchhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhcccccccccccccccccc
Confidence 21 1234554433 2356667778899999999999999999999766544333221110000
Q ss_pred -----------hhHhHhhhhccc---ccce-ee--------------------eccccc-----cC--------------
Q psy6269 142 -----------ELAKIKLRVRFN---YCKV-II--------------------IKKTHL-----VL-------------- 167 (366)
Q Consensus 142 -----------~~~~~~~~~~~~---~~~~-~~--------------------~~~~~~-----~~-------------- 167 (366)
...+........ .... .. ...... +.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 340 (510)
T 4grv_A 261 TIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQ 340 (510)
T ss_dssp EEETTEECCCSSSHHHHHHSCCC---CCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHHSCSHHHHHHHHHHHH
T ss_pred ccccccccCCCCCCCccccccCcCCCCCCCCcccCCccccccCCCCcccccccccCCCCCCCcCccccccccccCCcccc
Confidence 000000000000 0000 00 000000 00
Q ss_pred -------CCCcccc--------cccc--ccccccccccc------ccCCccccccccchhhhhhHHHHHHHHHHHHHHHH
Q psy6269 168 -------PSSSIME--------RDRR--KSLASCSFSLQ------RSGLRLTDKCTRVSSLKRESKTAQTLSVVVGGFIA 224 (366)
Q Consensus 168 -------~~~~~~~--------~~~~--~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~k~~k~l~~v~~~f~v 224 (366)
....... .... .........+. ...........+....++|+|++||+++|+++|++
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~erk~~k~L~iVv~~F~i 420 (510)
T 4grv_A 341 MGETGVAGFTNSLRMLNNKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGSGSVQALRHGVLVARAVVIAFVV 420 (510)
T ss_dssp HHHHHHTTCHHHHHHHTTTCHHHHHHHHHSSCSCCSSHHHHHHHHHHHHHSSSGGGTTSTTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCccccccccCCCcccccccccccccccCCccccccccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000000 0000 00000000000 00001112223345567899999999999999999
Q ss_pred hchhHHHHHHHhhhCCCCCCCh-------HHHHHHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHH
Q psy6269 225 CWLPFFIVYLANPFLPAGTISP-------LLSNSLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWL 297 (366)
Q Consensus 225 cwlP~~i~~~~~~~~~~~~~~~-------~~~~~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (366)
||+||+++.++..++++..... ++..+..||+|+||++||+
T Consensus 421 CWlPf~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y~NS~iNPi-------------------------------- 468 (510)
T 4grv_A 421 CWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPI-------------------------------- 468 (510)
T ss_dssp HHHHHHHHHHHHHTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------
T ss_pred HHHHHHHHHHHHHHcCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------
Confidence 9999999999988876654432 3456778999999999999
Q ss_pred hhhhccceEEEeeccccchhHHHHHHHHhhhhcccccch
Q psy6269 298 VGIFVMPFAVALHITVPRSDFRLAFWRLTLKHCNKSRRT 336 (366)
Q Consensus 298 ~~~~~~~~iy~~~~~~~~~~fR~~~~~~~~~~~~~~~~~ 336 (366)
||++ +|++||++|+++++|.|++.|++
T Consensus 469 --------IY~~----~n~~FR~aFk~iL~C~C~~~r~R 495 (510)
T 4grv_A 469 --------LYNL----VSANFRQVFLSTLACLCPGWRHR 495 (510)
T ss_dssp --------HHHH----HHSCCCCC---------------
T ss_pred --------HHHh----cCHHHHHHHHHHHhhcCCCCCCC
Confidence 9999 99999999999998777665554
No 2
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.1e-36 Score=292.48 Aligned_cols=130 Identities=28% Similarity=0.394 Sum_probs=106.3
Q ss_pred CccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhhhhhccCccCccccchhhHHHHHHHHHHHHHHHhhhhhhhcccc-
Q psy6269 1 SWEFGWILCDIWVSLDVCLCTASILSLCAISIDRYLAVTQPLTYSRKTRSKKLALYMILCVWVLALVITCPPILGWYDK- 79 (366)
Q Consensus 1 ~W~~g~~~C~~~~~l~~~~~~~S~~~l~~IaidRY~aV~~Pl~y~~~~~t~~~a~~~i~~~Wi~s~l~~~p~~~~~~~~- 79 (366)
+|++|+.+|++..++..++..+|++++++||+|||++|++|++|+..+ +++++..+++++|++++++++|+++++...
T Consensus 85 ~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~-t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~ 163 (484)
T 3vw7_A 85 DWQFGSELCRFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWR-TLGRASFTCLAIWALAIAGVVPLLLKEQTIQ 163 (484)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----C-CHHHHHHHHHHHHHHHHHHHHHHHTSCCEEE
T ss_pred CcccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHheEEEccccccccc-chhHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 599999999999999999999999999999999999999999998777 888899999999999999999999987443
Q ss_pred -CCCCCCcccccCCcc--------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy6269 80 -DRHRDKRCGYNQNRG--------YVVFSGMGSFFIPLLVVLYVYARISCVIARRHNNLEA 131 (366)
Q Consensus 80 -~~~~~~~C~~~~~~~--------~~~~~~~~~~~lP~~ii~~~y~~I~~~lr~~~~~~~~ 131 (366)
.......|...+... |..+..++.+++|+++|+++|++|++.++++.++.+.
T Consensus 164 ~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~~~~~ 224 (484)
T 3vw7_A 164 VPGLGITTCHDVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSANIFEM 224 (484)
T ss_dssp ETTTTEEEESSSCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHH
T ss_pred cCCCCCceeeccCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhHHHHh
Confidence 233456786544221 5556678889999999999999999999988765443
No 3
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=100.00 E-value=8.8e-35 Score=283.29 Aligned_cols=288 Identities=26% Similarity=0.415 Sum_probs=188.8
Q ss_pred CccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhhhhhccCccCccccchhhHHHHHHHHHHHHHHHhhhhhhhcccc-
Q psy6269 1 SWEFGWILCDIWVSLDVCLCTASILSLCAISIDRYLAVTQPLTYSRKTRSKKLALYMILCVWVLALVITCPPILGWYDK- 79 (366)
Q Consensus 1 ~W~~g~~~C~~~~~l~~~~~~~S~~~l~~IaidRY~aV~~Pl~y~~~~~t~~~a~~~i~~~Wi~s~l~~~p~~~~~~~~- 79 (366)
+|.+|+..|++..++..++..+|++++++||+|||++|++|++|+..+ +++++..+++++|++++++++|+++++...
T Consensus 88 ~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~-~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~ 166 (467)
T 3uon_A 88 YWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKR-TTKMAGMMIAAAWVLSFILWAPAILFWQFIV 166 (467)
T ss_dssp SCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCcchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-chhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 599999999999999999999999999999999999999999998887 888899999999999999999999876332
Q ss_pred --CCCCCCcccccC--CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccc---------------
Q psy6269 80 --DRHRDKRCGYNQ--NRGYVVFSGMGSFFIPLLVVLYVYARISCVIARRHNNLEALNHQHTLGR--------------- 140 (366)
Q Consensus 80 --~~~~~~~C~~~~--~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~~--------------- 140 (366)
...+...|..++ ...|..+..++.+++|+++++++|++|++.++++.++............
T Consensus 167 ~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (467)
T 3uon_A 167 GVRTVEDGECYIQFFSNAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINIFEMLRIDEGLRLKIYKDTEGYYTIGIG 246 (467)
T ss_dssp SCCCCCSSCCCCGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHSCCEEEEEECTTSCEEEETT
T ss_pred cccCCCCCcceeecCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhcccccceeeccchhhcccccC
Confidence 233456786544 4456777888889999999999999999999988765554332111000
Q ss_pred --------hhhHhHhh-hhcccccce-ee------------------eccccccCC---CCccccc--------------
Q psy6269 141 --------HELAKIKL-RVRFNYCKV-II------------------IKKTHLVLP---SSSIMER-------------- 175 (366)
Q Consensus 141 --------~~~~~~~~-~~~~~~~~~-~~------------------~~~~~~~~~---~~~~~~~-------------- 175 (366)
.+.+.... ...+..... .. ...+....+ ......+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (467)
T 3uon_A 247 HLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETG 326 (467)
T ss_dssp EECCCCSSHHHHHHHHHHHHSSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred cccccCCcccccccccccccccCCCCcccccccccccccccchhhcccccCCCCCccccccccccccccccceeeccccC
Confidence 00000000 000000000 00 000000000 0000000
Q ss_pred ----------ccccccccc-----cccccccCC---------ccccccccchhhhhhHHHHHHHHHHHHHHHHhchhHHH
Q psy6269 176 ----------DRRKSLASC-----SFSLQRSGL---------RLTDKCTRVSSLKRESKTAQTLSVVVGGFIACWLPFFI 231 (366)
Q Consensus 176 ----------~~~~~~~~~-----~~~~~~~~~---------~~~~~~~~~~~~~~~~k~~k~l~~v~~~f~vcwlP~~i 231 (366)
.+....... ......+.+ ............++|+|++||+++++++|++||+|+.+
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i 406 (467)
T 3uon_A 327 VAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYPPPSREKKVTRTILAILLAFIITWAPYNV 406 (467)
T ss_dssp HGGGHHHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSTTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccccchhhhcCccccccccccccccCCCCcccccccchhhcccccccccchHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 000000000 000000000 00001111223357899999999999999999999999
Q ss_pred HHHHhhhCCCCCCChHHHHHHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEEEeec
Q psy6269 232 VYLANPFLPAGTISPLLSNSLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAVALHI 311 (366)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy~~~~ 311 (366)
+.++..+.+ .........+..+|.++|+++||+ +|++
T Consensus 407 ~~~~~~~~~-~~~~~~~~~i~~~L~~~ns~~NPi----------------------------------------IY~~-- 443 (467)
T 3uon_A 407 MVLINTFCA-PCIPNTVWTIGYWLCYINSTINPA----------------------------------------CYAL-- 443 (467)
T ss_dssp HHHHHHHCS-TTSCHHHHHHHHHHHHHTTTHHHH----------------------------------------HHHH--
T ss_pred HHHHHHHHh-cccchHHHHHHHHHHHHhhhhhhH----------------------------------------HHHH--
Confidence 999988765 345678888999999999999999 9999
Q ss_pred cccchhHHHHHHHHhhhhccccc
Q psy6269 312 TVPRSDFRLAFWRLTLKHCNKSR 334 (366)
Q Consensus 312 ~~~~~~fR~~~~~~~~~~~~~~~ 334 (366)
++++||+++++++++.+++.+
T Consensus 444 --~~~~fR~~~~~ll~c~~~~~~ 464 (467)
T 3uon_A 444 --CNATFKKTFKHLLMCHYKNIG 464 (467)
T ss_dssp --HCHHHHHHHHHHCC-------
T ss_pred --cCHHHHHHHHHHHhhhccCCC
Confidence 999999999999955554433
No 4
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=100.00 E-value=2.2e-33 Score=276.90 Aligned_cols=127 Identities=35% Similarity=0.756 Sum_probs=105.2
Q ss_pred CccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhhhhhccCccCccccchhhHHHHHHHHHHHHHHHhhhhh-hhcccc
Q psy6269 1 SWEFGWILCDIWVSLDVCLCTASILSLCAISIDRYLAVTQPLTYSRKTRSKKLALYMILCVWVLALVITCPPI-LGWYDK 79 (366)
Q Consensus 1 ~W~~g~~~C~~~~~l~~~~~~~S~~~l~~IaidRY~aV~~Pl~y~~~~~t~~~a~~~i~~~Wi~s~l~~~p~~-~~~~~~ 79 (366)
+|++|+.+|++..++..++..+|++++++||+|||++|++|++|+..+ +++++..+++++|+++++++++|+ +++...
T Consensus 105 ~w~~~~~~C~~~~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~-t~~~~~~~i~~~W~~s~~~~~~p~~~~~~~~ 183 (500)
T 2rh1_A 105 MWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLL-TKNKARVIILMVWIVSGLTSFLPIQMHWYRA 183 (500)
T ss_dssp SCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSS-CHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC
T ss_pred CCcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeee-cccceeehhhHHHHHHHHHHhcchheeeecc
Confidence 599999999999999999999999999999999999999999998877 888899999999999999986544 454332
Q ss_pred CCCCCCccc-------ccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy6269 80 DRHRDKRCG-------YNQNRGYVVFSGMGSFFIPLLVVLYVYARISCVIARRHNN 128 (366)
Q Consensus 80 ~~~~~~~C~-------~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~lr~~~~~ 128 (366)
...+...|. ......|..+..++.+++|+++|+++|++|++.++++.++
T Consensus 184 ~~~~~~~c~~~~~~~~~~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~ 239 (500)
T 2rh1_A 184 THQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNI 239 (500)
T ss_dssp CSHHHHHHHHCTTCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSH
T ss_pred cccCcceecccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222332 2334557777888889999999999999999999998766
No 5
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=100.00 E-value=3.8e-34 Score=280.18 Aligned_cols=291 Identities=25% Similarity=0.350 Sum_probs=191.0
Q ss_pred CccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhhhhhccCccCccccchhhHHHHHHHHHHHHHHHhhhhhhhccccC
Q psy6269 1 SWEFGWILCDIWVSLDVCLCTASILSLCAISIDRYLAVTQPLTYSRKTRSKKLALYMILCVWVLALVITCPPILGWYDKD 80 (366)
Q Consensus 1 ~W~~g~~~C~~~~~l~~~~~~~S~~~l~~IaidRY~aV~~Pl~y~~~~~t~~~a~~~i~~~Wi~s~l~~~p~~~~~~~~~ 80 (366)
+|.+|...|++..++..++..+|++++++||+|||++|++|++|+..+ +++++..+++++|++++++++|+++++....
T Consensus 84 ~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~-~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~ 162 (488)
T 3eml_A 84 GFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLV-TGTRAKGIIAICWVLSFAIGLTPMLGWNNCG 162 (488)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTS-CHHHHHHHHHHHHHHHHHHHTTGGGTCCSSC
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeccccccccc-CHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 588999999999999999999999999999999999999999998887 8888999999999999999999999874433
Q ss_pred CC-----CCCcccccC----------CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccch----
Q psy6269 81 RH-----RDKRCGYNQ----------NRGYVVFSGMGSFFIPLLVVLYVYARISCVIARRHNNLEALNHQHTLGRH---- 141 (366)
Q Consensus 81 ~~-----~~~~C~~~~----------~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~~~---- 141 (366)
.. ....|...+ ...+..+..++.+++|+++|+++|++|++.++++.++.............
T Consensus 163 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~ 242 (488)
T 3eml_A 163 QPKEGKNHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKD 242 (488)
T ss_dssp C-------CCSSCTTCEECCHHHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHTCCEEEEEEC
T ss_pred ccccccccccccccccceeeccccccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhccccccchhhccc
Confidence 21 234565432 11244456778899999999999999999999887765544321111000
Q ss_pred -------------------hh---H-hHhhhhcccccceeee-c---cccccCCCCcccccccccc--------------
Q psy6269 142 -------------------EL---A-KIKLRVRFNYCKVIII-K---KTHLVLPSSSIMERDRRKS-------------- 180 (366)
Q Consensus 142 -------------------~~---~-~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~-------------- 180 (366)
+. . +...+...+...+... . +.+................
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (488)
T 3eml_A 243 TEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALI 322 (488)
T ss_dssp TTSCEEEETTEEEESSSCHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHHCTTHHHHHHHSCHHHHHHHH
T ss_pred cccceeccccccCCCCccccccccccccCCCCCCCCCCChhhhccCcccCccccccccCCCCCCCCCcCCcchHHHhhhh
Confidence 00 0 0000000000000000 0 0000000000000000000
Q ss_pred -----------cccc---------------------ccccc--------ccCCccccccccchhhhhhHHHHHHHHHHHH
Q psy6269 181 -----------LASC---------------------SFSLQ--------RSGLRLTDKCTRVSSLKRESKTAQTLSVVVG 220 (366)
Q Consensus 181 -----------~~~~---------------------~~~~~--------~~~~~~~~~~~~~~~~~~~~k~~k~l~~v~~ 220 (366)
.... ....+ ....+...........++|+|++||++++++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~ 402 (488)
T 3eml_A 323 NMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVG 402 (488)
T ss_dssp HHHHHHCHHHHTTCHHHHHHHHTTCHHHHHHHHTTSHHHHHCHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCCccCCCCcchhhhhccccccccCcccccCcccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 0000 00000 0000001112223445789999999999999
Q ss_pred HHHHhchhHHHHHHHhhhCCCC-CCChHHHHHHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhh
Q psy6269 221 GFIACWLPFFIVYLANPFLPAG-TISPLLSNSLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVG 299 (366)
Q Consensus 221 ~f~vcwlP~~i~~~~~~~~~~~-~~~~~~~~~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (366)
+|++||+|+.++.++..+.+.. ........+..+|.++||++||+
T Consensus 403 ~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPi---------------------------------- 448 (488)
T 3eml_A 403 LFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPF---------------------------------- 448 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------
T ss_pred HHHHHhhhHHHHHHHHhccCccccccHHHHHHHHHHHHHHhhhchh----------------------------------
Confidence 9999999999999998886543 45667788889999999999999
Q ss_pred hhccceEEEeeccccchhHHHHHHHHhhhhcccccch
Q psy6269 300 IFVMPFAVALHITVPRSDFRLAFWRLTLKHCNKSRRT 336 (366)
Q Consensus 300 ~~~~~~iy~~~~~~~~~~fR~~~~~~~~~~~~~~~~~ 336 (366)
+|++ ++++||+++++++++.|++.++.
T Consensus 449 ------IY~~----~~~~fR~~~~~l~~~~~~~~~~~ 475 (488)
T 3eml_A 449 ------IYAY----RIREFRQTFRKIIRSHVLRQQEP 475 (488)
T ss_dssp ------HHHH----HCHHHHHHHHHHHHHTTSCC---
T ss_pred ------hhhh----cCHHHHHHHHHHHhhcccccCCC
Confidence 9999 99999999999998877666554
No 6
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=100.00 E-value=1.5e-33 Score=275.83 Aligned_cols=279 Identities=33% Similarity=0.570 Sum_probs=185.8
Q ss_pred CccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhhhhhccCcc---CccccchhhHHHHHHHHHHHHHHHhhhhhhhcc
Q psy6269 1 SWEFGWILCDIWVSLDVCLCTASILSLCAISIDRYLAVTQPLTY---SRKTRSKKLALYMILCVWVLALVITCPPILGWY 77 (366)
Q Consensus 1 ~W~~g~~~C~~~~~l~~~~~~~S~~~l~~IaidRY~aV~~Pl~y---~~~~~t~~~a~~~i~~~Wi~s~l~~~p~~~~~~ 77 (366)
+|.+|+..|++..++..++..+|++++++||+|||++|++|++| .... +++++..+++++|++++++++|+++++.
T Consensus 104 ~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~-~~~~~~~~i~~~W~~~~~~~~~~~~~~~ 182 (481)
T 3pbl_A 104 VWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQS-SCRRVALMITAVWVLAFAVSCPLLFGFN 182 (481)
T ss_dssp CCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSS-CHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ccccCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccc-cHHHHHHHHHHHHHHHHHHHHHHHheec
Confidence 49999999999999999999999999999999999999999998 4555 7788999999999999999999998775
Q ss_pred ccCCCCCCcccccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccccc------------------
Q psy6269 78 DKDRHRDKRCGYNQNRGYVVFSGMGSFFIPLLVVLYVYARISCVIARRHNNLEALNHQHTLG------------------ 139 (366)
Q Consensus 78 ~~~~~~~~~C~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~------------------ 139 (366)
.. .+...|...+ ..|..+..++.+++|+++++++|++|++.++++.++...........
T Consensus 183 ~~--~~~~~C~~~~-~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (481)
T 3pbl_A 183 TT--GDPTVCSISN-PDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIG 259 (481)
T ss_dssp CC--SSTTCCSCCC-HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCSSCEECSSSCEEETTT
T ss_pred cc--CCCCcccccC-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhccccchhccccccCcccceeeccc
Confidence 43 3455686553 34677778888999999999999999999998765533222110000
Q ss_pred -------chhhHhHhhhhcccccceeeeccc--------c------------ccCC---CCccccc--------------
Q psy6269 140 -------RHELAKIKLRVRFNYCKVIIIKKT--------H------------LVLP---SSSIMER-------------- 175 (366)
Q Consensus 140 -------~~~~~~~~~~~~~~~~~~~~~~~~--------~------------~~~~---~~~~~~~-------------- 175 (366)
........................ . ...+ +.....+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (481)
T 3pbl_A 260 HLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETG 339 (481)
T ss_dssp EEEESSSCHHHHHHHHHHHHTSCCTTCCCHHHHHHHHHHHHHHHHHHHHHCTTTHHHHHTSCHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCcccccCCCcccchhccCCCceeccCCchhcccCCcccccccccccCccCccccccccccchhccccccccCCCC
Confidence 000000000000000000000000 0 0000 0000000
Q ss_pred ----------ccccccccccccccccC--------------CccccccccchhhhhhHHHHHHHHHHHHHHHHhchhHHH
Q psy6269 176 ----------DRRKSLASCSFSLQRSG--------------LRLTDKCTRVSSLKRESKTAQTLSVVVGGFIACWLPFFI 231 (366)
Q Consensus 176 ----------~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~k~~k~l~~v~~~f~vcwlP~~i 231 (366)
.+............... .............++|+|++||+++++++|++||+|+.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~iv~~F~icw~P~~i 419 (481)
T 3pbl_A 340 VAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGVPLREKKATQMVAIVLGAFIVCWLPFFL 419 (481)
T ss_dssp HTTCHHHHHHHHTTCHHHHHHHHHTSHHHHHSHHHHHHHHHHHHHSSSTTSSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcccccchhccccccccchhhhccccccCCcccccccceeecccccccccccchhhhHHHHHHHHHHHHHHHhhHHHH
Confidence 00000000000000000 000000111122346999999999999999999999999
Q ss_pred HHHHhhhCCCCCCChHHHHHHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEEEeec
Q psy6269 232 VYLANPFLPAGTISPLLSNSLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAVALHI 311 (366)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy~~~~ 311 (366)
+.++..+.+.......+..+..+|.++|+++||+ +|++
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPi----------------------------------------IY~~-- 457 (481)
T 3pbl_A 420 THVLNTHCQTCHVSPELYSATTWLGYVNSALNPV----------------------------------------IYTT-- 457 (481)
T ss_dssp HHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------HHHH--
T ss_pred HHHHHhccccccCcHHHHHHHHHHHHHhhccchH----------------------------------------HHHH--
Confidence 9999888776677788889999999999999999 9999
Q ss_pred cccchhHHHHHHHHhh
Q psy6269 312 TVPRSDFRLAFWRLTL 327 (366)
Q Consensus 312 ~~~~~~fR~~~~~~~~ 327 (366)
++++||++++++++
T Consensus 458 --~~~~fR~~~~~ll~ 471 (481)
T 3pbl_A 458 --FNIEFRKAFLKILS 471 (481)
T ss_dssp --HCHHHHHHHHHHHC
T ss_pred --cCHHHHHHHHHHHh
Confidence 99999999999994
No 7
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=100.00 E-value=1.9e-34 Score=279.30 Aligned_cols=291 Identities=24% Similarity=0.333 Sum_probs=186.5
Q ss_pred CccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhhhhhccCccCccccchhhHHHHHHHHHHHHHHHhhhhhhhccccC
Q psy6269 1 SWEFGWILCDIWVSLDVCLCTASILSLCAISIDRYLAVTQPLTYSRKTRSKKLALYMILCVWVLALVITCPPILGWYDKD 80 (366)
Q Consensus 1 ~W~~g~~~C~~~~~l~~~~~~~S~~~l~~IaidRY~aV~~Pl~y~~~~~t~~~a~~~i~~~Wi~s~l~~~p~~~~~~~~~ 80 (366)
+|.+|+..|++..++..++..+|++++++||+|||++|++|++|+.++ +++++..+++++|++++++++|+++++....
T Consensus 94 ~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~-~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~~~ 172 (447)
T 4eiy_A 94 GFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLV-TGTRAKGIIAICWVLSFAIGLTPMLGWNNCG 172 (447)
T ss_dssp TCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHS-CHHHHHHHHHHHHHHHHHHHTGGGGTCSSTT
T ss_pred ccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhh-hHHHHHHHHhHHHHHHHHHHHhhhheecccc
Confidence 488899999999999999999999999999999999999999998877 8888999999999999999999999875433
Q ss_pred CCC-----CCcccccC----------CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccc-----
Q psy6269 81 RHR-----DKRCGYNQ----------NRGYVVFSGMGSFFIPLLVVLYVYARISCVIARRHNNLEALNHQHTLGR----- 140 (366)
Q Consensus 81 ~~~-----~~~C~~~~----------~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~~----- 140 (366)
... ...|...+ ...+.....++.+++|+++++++|++|++.++++.++............
T Consensus 173 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~ 252 (447)
T 4eiy_A 173 QPKEGKNHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLADLEDNWETLNDNLKVIEK 252 (447)
T ss_dssp SCCHHHHHHTTCCTTEEECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCccccccccccccchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHhccCcCcCCc
Confidence 321 23343321 1123333455668999999999999999999998776654322110000
Q ss_pred -hhhHhHhhhhcc--------cccceeeeccccccCCCCcccccc-----------cccccccccc---------ccccc
Q psy6269 141 -HELAKIKLRVRF--------NYCKVIIIKKTHLVLPSSSIMERD-----------RRKSLASCSF---------SLQRS 191 (366)
Q Consensus 141 -~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~---------~~~~~ 191 (366)
.+....+..... ....+..........+........ .......... ...+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (447)
T 4eiy_A 253 ADNAAQVKDALTKMRAAALDAQKATPPKLEDKSPDSPEMKDFRHGFDILVGQIDDALKLANEGKVKEAQAAAEQLKTTRN 332 (447)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHC---------------CHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHTHHHHHH
T ss_pred cccchhhhccchhhhccCCCCCCCCCCCCcCCCCCCcccccccCCCCCCCCccchhhhhcccCCcCcccchhhhhccccc
Confidence 000000000000 000000000000000000000000 0000000000 00000
Q ss_pred CCccccccccchhhhhhHHHHHHHHHHHHHHHHhchhHHHHHHHhhhCCC-CCCChHHHHHHHHHHHHhhhhccccchhh
Q psy6269 192 GLRLTDKCTRVSSLKRESKTAQTLSVVVGGFIACWLPFFIVYLANPFLPA-GTISPLLSNSLTWLGKLSGSLRLFGNTLI 270 (366)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~k~~k~l~~v~~~f~vcwlP~~i~~~~~~~~~~-~~~~~~~~~~~~~l~~~ns~vNP~~n~~~ 270 (366)
..........+...++++|++||+++++++|++||+|+.++.++..+.++ .....+...+..++.++||++||+
T Consensus 333 ~~~~~~~~~~~~~~~~~~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPi----- 407 (447)
T 4eiy_A 333 AYIQKYLERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPF----- 407 (447)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHH-----
T ss_pred chhhccccchhHHHHHHHHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHhccchh-----
Confidence 01111122334456789999999999999999999999999999887654 345667788899999999999999
Q ss_pred hhhhhhccccccchhhHHHHHHHHHHHhhhhccceEEEeeccccchhHHHHHHHHhhhhcccccch
Q psy6269 271 IISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAVALHITVPRSDFRLAFWRLTLKHCNKSRRT 336 (366)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy~~~~~~~~~~fR~~~~~~~~~~~~~~~~~ 336 (366)
+|++ ++++||+++++++++.+++.+..
T Consensus 408 -----------------------------------IY~~----~~~~fR~~~~~~~~~~~~r~~~~ 434 (447)
T 4eiy_A 408 -----------------------------------IYAY----RIREFRQTFRKIIRSHVLRQQEP 434 (447)
T ss_dssp -----------------------------------HHHH----HCHHHHHHHHHHHHHTC------
T ss_pred -----------------------------------hhHh----ccHHHHHHHHHHHHHHHhccCCC
Confidence 9999 99999999999997776655444
No 8
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=100.00 E-value=4.2e-33 Score=270.30 Aligned_cols=285 Identities=25% Similarity=0.418 Sum_probs=183.4
Q ss_pred CccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhhhhhccCccCccccchhhHHHHHHHHHHHHHHHhhhhhhhccccC
Q psy6269 1 SWEFGWILCDIWVSLDVCLCTASILSLCAISIDRYLAVTQPLTYSRKTRSKKLALYMILCVWVLALVITCPPILGWYDKD 80 (366)
Q Consensus 1 ~W~~g~~~C~~~~~l~~~~~~~S~~~l~~IaidRY~aV~~Pl~y~~~~~t~~~a~~~i~~~Wi~s~l~~~p~~~~~~~~~ 80 (366)
+|++|+..|++..++..++..+|++++++||+|||++|++|++|+..+ +++++..+++++|++++++++|.+.......
T Consensus 73 ~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~-~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~ 151 (452)
T 3rze_A 73 KWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYR-TKTRASATILGAWFLSFLWVIPILGWNHFMQ 151 (452)
T ss_dssp SCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTS-SHHHHHHHHHHHHHHHGGGHHHHHCCCC---
T ss_pred CccCCchhHhHHHHHHHHHHHHHHHHHHHHHHHHHHheeCcccccccc-chhHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 599999999999999999999999999999999999999999998887 8888999999999999999888543322111
Q ss_pred C---CCCCcccccC--CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccccc----------------
Q psy6269 81 R---HRDKRCGYNQ--NRGYVVFSGMGSFFIPLLVVLYVYARISCVIARRHNNLEALNHQHTLG---------------- 139 (366)
Q Consensus 81 ~---~~~~~C~~~~--~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~---------------- 139 (366)
. .....|..++ ...|..+..++.+++|+++++++|++|++.++++.++...........
T Consensus 152 ~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (452)
T 3rze_A 152 QTSVRREDKCETDFYDVTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLRIDEGLRLKIYKDTEGYYTIGIG 231 (452)
T ss_dssp ----CCSSSSCCSCTTCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHCEEEEEEECTTSCEEEEET
T ss_pred ccccCCCCeecCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHhhhhhhhhhhhcccCCcccccccc
Confidence 1 2456785443 444677788888999999999999999999988766544433211100
Q ss_pred -------chhhHhHhh----hhcccccceeeecc----ccccCCCCcccccccc-----------------------ccc
Q psy6269 140 -------RHELAKIKL----RVRFNYCKVIIIKK----THLVLPSSSIMERDRR-----------------------KSL 181 (366)
Q Consensus 140 -------~~~~~~~~~----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-----------------------~~~ 181 (366)
..+...... +...++........ .+..........+... ..+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (452)
T 3rze_A 232 HLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETG 311 (452)
T ss_dssp EECSSCSSHHHHHHHHHHHHTSCCTTBCCHHHHHHHHHHHHHHHHHHHHTCTTTHHHHHHSCHHHHHHHHHHHHHHCHHH
T ss_pred cccccCCCCCcccccccCCCCCCCCccccCCcccchhcCCCcccccCcccccccCCcccCCCccccccccccccccCCCC
Confidence 000000000 00000000000000 0000000000000000 000
Q ss_pred ccccc----------------cccccC--Cc------------cccccccchhhhhhHHHHHHHHHHHHHHHHhchhHHH
Q psy6269 182 ASCSF----------------SLQRSG--LR------------LTDKCTRVSSLKRESKTAQTLSVVVGGFIACWLPFFI 231 (366)
Q Consensus 182 ~~~~~----------------~~~~~~--~~------------~~~~~~~~~~~~~~~k~~k~l~~v~~~f~vcwlP~~i 231 (366)
.+... ...... +. .....+.....++|+|++||+++++++|++||+|+.+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~vv~~f~icwlP~~i 391 (452)
T 3rze_A 312 VAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYLHMNRERKAAKQLGFIMAAFILCWIPYFI 391 (452)
T ss_dssp HTSCHHHHHHHHTTCHHHHHHHHTTSHHHHHSHHHHHHHHHHHHHSSSGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccCcchhhhcCCccccccccCCccCCCCCcccchhhhhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 00000 000000 00 0001111234568999999999999999999999999
Q ss_pred HHHHhhhCCCCCCChHHHHHHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEEEeec
Q psy6269 232 VYLANPFLPAGTISPLLSNSLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAVALHI 311 (366)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy~~~~ 311 (366)
+.++..+.+. .....+..+..+|.++|+++||+ +|++
T Consensus 392 ~~l~~~~~~~-~~~~~~~~~~~~L~~~ns~~NPi----------------------------------------IY~~-- 428 (452)
T 3rze_A 392 FFMVIAFCKN-CCNEHLHMFTIWLGYINSTLNPL----------------------------------------IYPL-- 428 (452)
T ss_dssp HHHHHHHHSC-CSCTTTHHHHHHHHHHHHHHHHH----------------------------------------HHHH--
T ss_pred HHHHHHHhcc-cccHHHHHHHHHHHHHHhcccch----------------------------------------hhhh--
Confidence 9999877544 34456677889999999999999 9999
Q ss_pred cccchhHHHHHHHHhhhhcc
Q psy6269 312 TVPRSDFRLAFWRLTLKHCN 331 (366)
Q Consensus 312 ~~~~~~fR~~~~~~~~~~~~ 331 (366)
++++||+++++++++.++
T Consensus 429 --~~~~fR~~~~~ll~~~~~ 446 (452)
T 3rze_A 429 --CNENFKKTFKRILHIRSG 446 (452)
T ss_dssp --HCHHHHHHHHHHHTC---
T ss_pred --ccHHHHHHHHHHHHhccc
Confidence 999999999999954443
No 9
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=100.00 E-value=1.3e-34 Score=284.75 Aligned_cols=131 Identities=22% Similarity=0.318 Sum_probs=112.6
Q ss_pred CccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhhhhhccCccCccccchhhHHHHHHHHHHHHHHHhhhhhhhccccC
Q psy6269 1 SWEFGWILCDIWVSLDVCLCTASILSLCAISIDRYLAVTQPLTYSRKTRSKKLALYMILCVWVLALVITCPPILGWYDKD 80 (366)
Q Consensus 1 ~W~~g~~~C~~~~~l~~~~~~~S~~~l~~IaidRY~aV~~Pl~y~~~~~t~~~a~~~i~~~Wi~s~l~~~p~~~~~~~~~ 80 (366)
+|++|+..|++..++..++..+|++++++||+|||++|++|++|+..+ +++++..+++++|++++++++|+++.+....
T Consensus 111 ~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~-~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~ 189 (502)
T 3odu_A 111 NWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPR-KLLAEKVVYVGVWIPALLLTIPDFIFANVSE 189 (502)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHH-HHHHHTHHHHHTHHHHHHTTHHHHHHEEEEE
T ss_pred CCcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheeccccccccc-chhHHHHhhhHHHHHHHHHHHHHHHheeeec
Confidence 599999999999999999999999999999999999999999998777 8888999999999999999999998776555
Q ss_pred CCCCCcccccCCc-----chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q psy6269 81 RHRDKRCGYNQNR-----GYVVFSGMGSFFIPLLVVLYVYARISCVIARRHNNLEAL 132 (366)
Q Consensus 81 ~~~~~~C~~~~~~-----~~~~~~~~~~~~lP~~ii~~~y~~I~~~lr~~~~~~~~~ 132 (366)
..+...|...+.. .|.+...++.+++|+++|+++|++|++.++++.++....
T Consensus 190 ~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~ 246 (502)
T 3odu_A 190 ADDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNIFEM 246 (502)
T ss_dssp CSSSEEEEECCSSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCCHHHH
T ss_pred cCCceEEeecCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhh
Confidence 5566778754432 255556778889999999999999999999877665443
No 10
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=100.00 E-value=4.4e-34 Score=277.93 Aligned_cols=132 Identities=27% Similarity=0.482 Sum_probs=111.6
Q ss_pred CccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhhhhhccCccCccccchhhHHHHHHHHHHHHHHHhhhhhhhccccC
Q psy6269 1 SWEFGWILCDIWVSLDVCLCTASILSLCAISIDRYLAVTQPLTYSRKTRSKKLALYMILCVWVLALVITCPPILGWYDKD 80 (366)
Q Consensus 1 ~W~~g~~~C~~~~~l~~~~~~~S~~~l~~IaidRY~aV~~Pl~y~~~~~t~~~a~~~i~~~Wi~s~l~~~p~~~~~~~~~ 80 (366)
+|.+|+..|++..++..++..+|++++++||+|||++|++|++|+..+ +++++..+++++|++++++++|+++......
T Consensus 81 ~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~-~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~ 159 (464)
T 4dkl_A 81 TWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFR-TPRNAKIVNVCNWILSSAIGLPVMFMATTKY 159 (464)
T ss_dssp SCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHSBCCEE
T ss_pred CcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-cccHhHHhHHHHHHHHHHHHHHHHHheeecc
Confidence 599999999999999999999999999999999999999999998777 8888999999999999999999988665544
Q ss_pred CCCCCcccccCCc-------chhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q psy6269 81 RHRDKRCGYNQNR-------GYVVFSGMGSFFIPLLVVLYVYARISCVIARRHNNLEALN 133 (366)
Q Consensus 81 ~~~~~~C~~~~~~-------~~~~~~~~~~~~lP~~ii~~~y~~I~~~lr~~~~~~~~~~ 133 (366)
..+...|...+.. .|.....++.+++|+++++++|++|++.+++++++.+...
T Consensus 160 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~~~~~~~ 219 (464)
T 4dkl_A 160 RQGSIDCTLTFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRNIFEMLR 219 (464)
T ss_dssp ETTEEECCBCCSSSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCSHHHHHH
T ss_pred cCCCceEEeecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhc
Confidence 4556667654422 2556677778999999999999999999988766554443
No 11
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.98 E-value=4e-32 Score=269.25 Aligned_cols=122 Identities=20% Similarity=0.357 Sum_probs=99.9
Q ss_pred CccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhhhhhccCccCccccchhhHHHHHHHHHHHHHHHhhhhhhhccccC
Q psy6269 1 SWEFGWILCDIWVSLDVCLCTASILSLCAISIDRYLAVTQPLTYSRKTRSKKLALYMILCVWVLALVITCPPILGWYDKD 80 (366)
Q Consensus 1 ~W~~g~~~C~~~~~l~~~~~~~S~~~l~~IaidRY~aV~~Pl~y~~~~~t~~~a~~~i~~~Wi~s~l~~~p~~~~~~~~~ 80 (366)
.|.+|+..|++..++..++.++|++++++||+|||+||+ |++|+..+ +++++..+++++|++++++++|+++++...
T Consensus 127 ~~~~~~~~c~~~~~~~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~-t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~- 203 (520)
T 3v2y_A 127 TYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITML-KMKLHNGS-NNFRLFLLISACWVISLILGGLPIMGWNCI- 203 (520)
T ss_dssp GTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C--------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCT-
T ss_pred ceeeCccccchHHHHHHHHHHHHHHHHHHHHHHHhhEEe-cccccccc-chhHHHHHHHHHHHHHHHHHHHHHHeeccc-
Confidence 489999999999999999999999999999999999999 99998887 888899999999999999999999988655
Q ss_pred CCCCCcccccCC--cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy6269 81 RHRDKRCGYNQN--RGYVVFSGMGSFFIPLLVVLYVYARISCVIARRH 126 (366)
Q Consensus 81 ~~~~~~C~~~~~--~~~~~~~~~~~~~lP~~ii~~~y~~I~~~lr~~~ 126 (366)
.+...|...+. ..+.....++.|++|+++|++||.+|++.+++++
T Consensus 204 -~~~~~C~~~~~~~~~~~~~~~~~~~~lPl~ii~~~Y~~I~~~l~~~~ 250 (520)
T 3v2y_A 204 -SALSSCSTVLPLYHKHYILFCTTVFTLLLLSIVILYCRIYSLVRTRN 250 (520)
T ss_dssp -TCGGGBCSSSTTBBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cCCCcccccCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34568976542 2334445566799999999999999999999876
No 12
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.97 E-value=2e-31 Score=258.95 Aligned_cols=226 Identities=23% Similarity=0.416 Sum_probs=182.9
Q ss_pred CccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhhhhhccCccCccccchhhHHHHHHHHHHHHHHHhhhhhhhccccC
Q psy6269 1 SWEFGWILCDIWVSLDVCLCTASILSLCAISIDRYLAVTQPLTYSRKTRSKKLALYMILCVWVLALVITCPPILGWYDKD 80 (366)
Q Consensus 1 ~W~~g~~~C~~~~~l~~~~~~~S~~~l~~IaidRY~aV~~Pl~y~~~~~t~~~a~~~i~~~Wi~s~l~~~p~~~~~~~~~ 80 (366)
+|.+|+..|++..++..++..+|++++++||+|||++|++|++|+.++ +++++..+++++|++++++++++++++....
T Consensus 100 ~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~-~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~ 178 (448)
T 2z73_A 100 KWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKM-SHRRAFIMIIFVWLWSVLWAIGPIFGWGAYT 178 (448)
T ss_dssp SCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCC-CHHHHHHHHHHHHHHHHHHHSGGGGTSSCEE
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccee-chhHHHHHHHHHHHHHHHHHHHHHhceeeee
Confidence 599999999999999999999999999999999999999999998777 8888999999999999999999998874432
Q ss_pred C-CCCCcccccCC------cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccchhhHhHhhhhccc
Q psy6269 81 R-HRDKRCGYNQN------RGYVVFSGMGSFFIPLLVVLYVYARISCVIARRHNNLEALNHQHTLGRHELAKIKLRVRFN 153 (366)
Q Consensus 81 ~-~~~~~C~~~~~------~~~~~~~~~~~~~lP~~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (366)
. .....|..++. ..+.....++.+++|+++++++|++|++.++++.++..+.........
T Consensus 179 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~------------- 245 (448)
T 2z73_A 179 LEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKE------------- 245 (448)
T ss_dssp ECTTSSSEEECCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTCCTT-------------
T ss_pred ecCCceeEecccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH-------------
Confidence 2 23456765432 224555666778999999999999999999998776654422110000
Q ss_pred ccceeeeccccccCCCCcccccccccccccccccccccCCccccccccchhhhhhHHHHHHHHHHHHHHHHhchhHHHHH
Q psy6269 154 YCKVIIIKKTHLVLPSSSIMERDRRKSLASCSFSLQRSGLRLTDKCTRVSSLKRESKTAQTLSVVVGGFIACWLPFFIVY 233 (366)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~v~~~f~vcwlP~~i~~ 233 (366)
..+.+...++++|++|++++++++|++||+|+.++.
T Consensus 246 --------------------------------------------~~~~~~~~~~~~k~~~~l~~iv~~F~i~~~P~~i~~ 281 (448)
T 2z73_A 246 --------------------------------------------LRKAQAGANAEMRLAKISIVIVSQFLLSWSPYAVVA 281 (448)
T ss_dssp --------------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------------------HHhhhccccHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 011223446789999999999999999999999999
Q ss_pred HHhhhCCCCCCChHHHHHHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEEEeeccc
Q psy6269 234 LANPFLPAGTISPLLSNSLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAVALHITV 313 (366)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy~~~~~~ 313 (366)
++..+............+..++.++|+++||+ +|++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPi----------------------------------------IY~~---- 317 (448)
T 2z73_A 282 LLAQFGPLEWVTPYAAQLPVMFAKASAIHNPM----------------------------------------IYSV---- 317 (448)
T ss_dssp HHHHHSCGGGCCHHHHHHHHHHHHHGGGSHHH----------------------------------------HHHH----
T ss_pred HHHHhCCcccCChHHHHHHHHHHHHHHhhcch----------------------------------------HHHH----
Confidence 98877544344566777888999999999999 9999
Q ss_pred cchhHHHHHHHHhhh
Q psy6269 314 PRSDFRLAFWRLTLK 328 (366)
Q Consensus 314 ~~~~fR~~~~~~~~~ 328 (366)
++++||+++++++++
T Consensus 318 ~~~~fR~~~~~~~~~ 332 (448)
T 2z73_A 318 SHPKFREAISQTFPW 332 (448)
T ss_dssp HCHHHHHHHHHHCGG
T ss_pred hhHHHHHHHHHHHHH
Confidence 999999999999854
No 13
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.97 E-value=2.5e-31 Score=250.87 Aligned_cols=215 Identities=24% Similarity=0.383 Sum_probs=172.1
Q ss_pred CccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhhhhhccCccCccccchhhHHHHHHHHHHHHHHHhhhhhhhccccC
Q psy6269 1 SWEFGWILCDIWVSLDVCLCTASILSLCAISIDRYLAVTQPLTYSRKTRSKKLALYMILCVWVLALVITCPPILGWYDKD 80 (366)
Q Consensus 1 ~W~~g~~~C~~~~~l~~~~~~~S~~~l~~IaidRY~aV~~Pl~y~~~~~t~~~a~~~i~~~Wi~s~l~~~p~~~~~~~~~ 80 (366)
+|.+|+..|++..++..++..+|.+++++||+|||++|++|++|+ . +++++..+++++|++++++++|++.......
T Consensus 97 ~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~--~-~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~ 173 (364)
T 2ks9_A 97 EWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR--L-SATATKVVICVIWVLALLLAFPQGYYSTTET 173 (364)
T ss_dssp SCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTS--C-CHHHHHHHHHHHHHHHHHHHTTTTTTSCCCB
T ss_pred CccchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--c-ccchHHHHHHHHHHHHHHHHhHHHHHhhhee
Confidence 599999999999999999999999999999999999999999975 3 7777888999999999999998765444344
Q ss_pred CCCCCcccccCC--------cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccchhhHhHhhhhcc
Q psy6269 81 RHRDKRCGYNQN--------RGYVVFSGMGSFFIPLLVVLYVYARISCVIARRHNNLEALNHQHTLGRHELAKIKLRVRF 152 (366)
Q Consensus 81 ~~~~~~C~~~~~--------~~~~~~~~~~~~~lP~~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (366)
..+...|..++. ..|.....++.+++|+++++++|.+|++.+++++.+...
T Consensus 174 ~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~~~--------------------- 232 (364)
T 2ks9_A 174 MPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGDS--------------------- 232 (364)
T ss_dssp CTTCSSBCCCCSCCCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSSSS---------------------
T ss_pred cCCCCEEeecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc---------------------
Confidence 445667865432 135556777788999999999999999887643211000
Q ss_pred cccceeeeccccccCCCCcccccccccccccccccccccCCccccccccchhhhhhHHHHHHHHHHHHHHHHhchhHHHH
Q psy6269 153 NYCKVIIIKKTHLVLPSSSIMERDRRKSLASCSFSLQRSGLRLTDKCTRVSSLKRESKTAQTLSVVVGGFIACWLPFFIV 232 (366)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~v~~~f~vcwlP~~i~ 232 (366)
....+.+.++++|++|++++++++|++||+|+.+.
T Consensus 233 ---------------------------------------------~~~~~~~~~~~~k~~~~~~~v~~~f~~~~~P~~i~ 267 (364)
T 2ks9_A 233 ---------------------------------------------SDRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIF 267 (364)
T ss_dssp ---------------------------------------------SSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------chhhhhhHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111344678999999999999999999999999
Q ss_pred HHHhhhCCCC---CCChHHHHHHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEEEe
Q psy6269 233 YLANPFLPAG---TISPLLSNSLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAVAL 309 (366)
Q Consensus 233 ~~~~~~~~~~---~~~~~~~~~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy~~ 309 (366)
.++..+.++. ........+..++.++|+++||+ +|++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPi----------------------------------------iY~~ 307 (364)
T 2ks9_A 268 FLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPI----------------------------------------IYCC 307 (364)
T ss_dssp HHHHHHSTTSCSSSCCHHHHHHHHHHHHHHHHHHHH----------------------------------------HHHH
T ss_pred HHHHHhCcccchhHHHHHHHHHHHHHHHHHHHHHHH----------------------------------------HHHH
Confidence 9887765432 22345667778899999999999 9999
Q ss_pred eccccchhHHHHHHHHhhh
Q psy6269 310 HITVPRSDFRLAFWRLTLK 328 (366)
Q Consensus 310 ~~~~~~~~fR~~~~~~~~~ 328 (366)
.+++||+++++++++
T Consensus 308 ----~~~~fR~~~~~~~~~ 322 (364)
T 2ks9_A 308 ----LNDRFRLGFKHAFRC 322 (364)
T ss_dssp ----HCHHHHHHHHHHHSS
T ss_pred ----HhHHHHHHHHHHHhh
Confidence 999999999999964
No 14
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.97 E-value=7.5e-31 Score=241.84 Aligned_cols=217 Identities=34% Similarity=0.660 Sum_probs=171.8
Q ss_pred CccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhhhhhccCccCccccchhhHHHHHHHHHHHHHHHhhhhhhhccccC
Q psy6269 1 SWEFGWILCDIWVSLDVCLCTASILSLCAISIDRYLAVTQPLTYSRKTRSKKLALYMILCVWVLALVITCPPILGWYDKD 80 (366)
Q Consensus 1 ~W~~g~~~C~~~~~l~~~~~~~S~~~l~~IaidRY~aV~~Pl~y~~~~~t~~~a~~~i~~~Wi~s~l~~~p~~~~~~~~~ 80 (366)
+|++|+..|++..++..++..+|.+++++||+|||++|++|++|+..+ +++++..+++++|++++++++|+.+......
T Consensus 76 ~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~-~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~ 154 (315)
T 4amj_A 76 TWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLM-TRARAKVIICTVWAISALVSFLPIMMHWWRD 154 (315)
T ss_dssp SCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC
T ss_pred CeeccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccc-chhhHHHhhhHHHHHHHHHHHHHHHHHhccc
Confidence 599999999999999999999999999999999999999999988777 8888999999999999999988887543222
Q ss_pred C-CCCCcc-------cccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccchhhHhHhhhhcc
Q psy6269 81 R-HRDKRC-------GYNQNRGYVVFSGMGSFFIPLLVVLYVYARISCVIARRHNNLEALNHQHTLGRHELAKIKLRVRF 152 (366)
Q Consensus 81 ~-~~~~~C-------~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (366)
. .+...| +......|.....++.+++|+++++++|.+|++.++++.++.+....
T Consensus 155 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~~~~~------------------ 216 (315)
T 4amj_A 155 EDPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASK------------------ 216 (315)
T ss_dssp CSHHHHHHHHCTTCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC---------------------------
T ss_pred cCCCccccccccccchhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccc------------------
Confidence 2 122233 22344556777777888999999999999999999876554322111
Q ss_pred cccceeeeccccccCCCCcccccccccccccccccccccCCccccccccchhhhhhHHHHHHHHHHHHHHHHhchhHHHH
Q psy6269 153 NYCKVIIIKKTHLVLPSSSIMERDRRKSLASCSFSLQRSGLRLTDKCTRVSSLKRESKTAQTLSVVVGGFIACWLPFFIV 232 (366)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~v~~~f~vcwlP~~i~ 232 (366)
...++...++|+|+++++++++++|++||+|+.+.
T Consensus 217 ---------------------------------------------~~~~~~~~~~~~k~~~~~~~~~~~f~i~~~P~~i~ 251 (315)
T 4amj_A 217 ---------------------------------------------RKTSRVMLMREHKALKTLGIIMGVFTLCWLPFFLV 251 (315)
T ss_dssp ------------------------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------cccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 01122344678999999999999999999999999
Q ss_pred HHHhhhCCCCCCChHHHHHHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEEEeecc
Q psy6269 233 YLANPFLPAGTISPLLSNSLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAVALHIT 312 (366)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy~~~~~ 312 (366)
.++..+.+ .........+..++.++||++||+ +| .
T Consensus 252 ~~~~~~~~-~~~~~~~~~~~~~l~~~ns~~nPi----------------------------------------iY-~--- 286 (315)
T 4amj_A 252 NIVNVFNR-DLVPDWLFVAFNWLGYANSAMNPI----------------------------------------IY-C--- 286 (315)
T ss_dssp HHHHHHCT-TSSCHHHHHHHHHHHHHGGGTHHH----------------------------------------HG-G---
T ss_pred HHHHHhcC-ccchHHHHHHHHHHHHHhccccHH----------------------------------------HH-c---
Confidence 99887653 344567778888999999999999 98 3
Q ss_pred ccchhHHHHHHHHhh
Q psy6269 313 VPRSDFRLAFWRLTL 327 (366)
Q Consensus 313 ~~~~~fR~~~~~~~~ 327 (366)
.+++||++++++++
T Consensus 287 -~~~~fR~~~~~~l~ 300 (315)
T 4amj_A 287 -RSPDFRKAFKRLLA 300 (315)
T ss_dssp -GSHHHHHHHHHHHC
T ss_pred -CcHHHHHHHHHHhC
Confidence 58999999999994
No 15
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.97 E-value=9.8e-32 Score=251.72 Aligned_cols=212 Identities=21% Similarity=0.414 Sum_probs=174.8
Q ss_pred CccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhhhhhccCccCccccchhhHHHHHHHHHHHHHHHhhhhhhhccccC
Q psy6269 1 SWEFGWILCDIWVSLDVCLCTASILSLCAISIDRYLAVTQPLTYSRKTRSKKLALYMILCVWVLALVITCPPILGWYDKD 80 (366)
Q Consensus 1 ~W~~g~~~C~~~~~l~~~~~~~S~~~l~~IaidRY~aV~~Pl~y~~~~~t~~~a~~~i~~~Wi~s~l~~~p~~~~~~~~~ 80 (366)
+|.+|+..|++..++..++..+|.+++++||+|||++|++|++|+. + +++++...++++|++++++++|+++++....
T Consensus 103 ~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~-~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~ 180 (349)
T 1u19_A 103 YFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-F-GENHAIMGVAFTWVMALACAAPPLVGWSRYI 180 (349)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-C-CHHHHHHHHHHHHHHHHHHHSGGGTTSSCCE
T ss_pred eeeCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccee-e-ccchhHHHHHHHHHHHHHHHHHHHHheeeee
Confidence 4999999999999999999999999999999999999999999865 5 7788999999999999999999998874332
Q ss_pred -CCCCCcccccC--------CcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccchhhHhHhhhhc
Q psy6269 81 -RHRDKRCGYNQ--------NRGYVVFSGMGSFFIPLLVVLYVYARISCVIARRHNNLEALNHQHTLGRHELAKIKLRVR 151 (366)
Q Consensus 81 -~~~~~~C~~~~--------~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (366)
+.....|..++ ...|.....++.+++|+++++++|.+|++.++++.++.+
T Consensus 181 ~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~--------------------- 239 (349)
T 1u19_A 181 PEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQ--------------------- 239 (349)
T ss_dssp EETTTTEEECCCSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSC---------------------
T ss_pred ccCCceeecccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc---------------------
Confidence 22345675443 223555666777899999999999999988765433210
Q ss_pred ccccceeeeccccccCCCCcccccccccccccccccccccCCccccccccchhhhhhHHHHHHHHHHHHHHHHhchhHHH
Q psy6269 152 FNYCKVIIIKKTHLVLPSSSIMERDRRKSLASCSFSLQRSGLRLTDKCTRVSSLKRESKTAQTLSVVVGGFIACWLPFFI 231 (366)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~v~~~f~vcwlP~~i 231 (366)
++....++++|++|++++++++|++||+|+.+
T Consensus 240 ------------------------------------------------~~~~~~~~~~~~~~~~~~i~~~f~i~~~P~~i 271 (349)
T 1u19_A 240 ------------------------------------------------ESATTQKAEKEVTRMVIIMVIAFLICWLPYAG 271 (349)
T ss_dssp ------------------------------------------------SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------------------cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01123467889999999999999999999999
Q ss_pred HHHHhhhCCCCCCChHHHHHHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEEEeec
Q psy6269 232 VYLANPFLPAGTISPLLSNSLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAVALHI 311 (366)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy~~~~ 311 (366)
..++....++.........+..++.++|+++||+ +|++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nPi----------------------------------------iY~~-- 309 (349)
T 1u19_A 272 VAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPV----------------------------------------IYIM-- 309 (349)
T ss_dssp HHHHHHHTTTSCCCHHHHHHHHHHGGGGGTHHHH----------------------------------------HHHH--
T ss_pred HhHhheecCCcccchHHHHHHHHHHHHHHHHhHH----------------------------------------HHHH--
Confidence 9888777655555667778888999999999999 9999
Q ss_pred cccchhHHHHHHHHhh
Q psy6269 312 TVPRSDFRLAFWRLTL 327 (366)
Q Consensus 312 ~~~~~~fR~~~~~~~~ 327 (366)
.+++||++++++++
T Consensus 310 --~~~~fR~~~~~~~~ 323 (349)
T 1u19_A 310 --MNKQFRNCMVTTLC 323 (349)
T ss_dssp --TCHHHHHHHHHHHT
T ss_pred --HhHHHHHHHHHHhc
Confidence 99999999999984
No 16
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.97 E-value=1.6e-30 Score=238.69 Aligned_cols=203 Identities=24% Similarity=0.412 Sum_probs=164.8
Q ss_pred CccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhhhhhccCccCccccchhhHHHHHHHHHHHHHHHhhhhhhhccccC
Q psy6269 1 SWEFGWILCDIWVSLDVCLCTASILSLCAISIDRYLAVTQPLTYSRKTRSKKLALYMILCVWVLALVITCPPILGWYDKD 80 (366)
Q Consensus 1 ~W~~g~~~C~~~~~l~~~~~~~S~~~l~~IaidRY~aV~~Pl~y~~~~~t~~~a~~~i~~~Wi~s~l~~~p~~~~~~~~~ 80 (366)
+|.+|+..|++..++...+..+|.+++++||+|||++|++|++|+.. .++++..+++++|++++++++|+.+++....
T Consensus 74 ~~~~~~~~c~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~--~~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~ 151 (296)
T 2lnl_A 74 GWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQ--KRHLVKFVCLGCWGLSMNLSLPFFLFRQAYH 151 (296)
T ss_dssp SSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCC--HHHHHHHHHHHHHHHHHHHHHHHHHTSSCCC
T ss_pred CCccchhHHHHHhhhhhhhHHHHHHHHHHHHhhhhhhhhhccccchh--hhhhhHheehHHHHHHHHHhcchhhcceeec
Confidence 59999999999999999999999999999999999999999998765 3455677888899999999999998875544
Q ss_pred CCCCC-cccc-------cCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccchhhHhHhhhhcc
Q psy6269 81 RHRDK-RCGY-------NQNRGYVVFSGMGSFFIPLLVVLYVYARISCVIARRHNNLEALNHQHTLGRHELAKIKLRVRF 152 (366)
Q Consensus 81 ~~~~~-~C~~-------~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (366)
..... .|.. .....+......+.+++|+.++.++|.++.+.++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~--------------------------- 204 (296)
T 2lnl_A 152 PNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKA--------------------------- 204 (296)
T ss_dssp CCTTSCCCCSCCSCCTTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSC---------------------------
T ss_pred CCCCCceeeeeccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------------
Confidence 33222 2211 123335666778889999999999999887544321
Q ss_pred cccceeeeccccccCCCCcccccccccccccccccccccCCccccccccchhhhhhHHHHHHHHHHHHHHHHhchhHHHH
Q psy6269 153 NYCKVIIIKKTHLVLPSSSIMERDRRKSLASCSFSLQRSGLRLTDKCTRVSSLKRESKTAQTLSVVVGGFIACWLPFFIV 232 (366)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~v~~~f~vcwlP~~i~ 232 (366)
..++++|++|++++++++|++||+|+.+.
T Consensus 205 ---------------------------------------------------~~~~~~k~~~~~~~v~~~f~icw~P~~i~ 233 (296)
T 2lnl_A 205 ---------------------------------------------------HMGQKHRAMRVIFAVVLIFLLCWLPYNLV 233 (296)
T ss_dssp ---------------------------------------------------CCHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------------------------hhhhhhhHHHHHHHhhhheeeeehHHHHH
Confidence 12567899999999999999999999999
Q ss_pred HHHhhhCCCCCCC---------hHHHHHHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhcc
Q psy6269 233 YLANPFLPAGTIS---------PLLSNSLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVM 303 (366)
Q Consensus 233 ~~~~~~~~~~~~~---------~~~~~~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (366)
.++..+.+..... .....+..+++++||++||+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPi-------------------------------------- 275 (296)
T 2lnl_A 234 LLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPI-------------------------------------- 275 (296)
T ss_dssp HHHHHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHH--------------------------------------
T ss_pred HHHHHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHH--------------------------------------
Confidence 9998776543322 23456778899999999999
Q ss_pred ceEEEeeccccchhHHHHHHHHhh
Q psy6269 304 PFAVALHITVPRSDFRLAFWRLTL 327 (366)
Q Consensus 304 ~~iy~~~~~~~~~~fR~~~~~~~~ 327 (366)
+|++ ++++||++++|+++
T Consensus 276 --IY~~----~~~~fR~~~~~ll~ 293 (296)
T 2lnl_A 276 --IYAF----IGQNFRHGFLKILA 293 (296)
T ss_dssp --HHHH----HCSHHHHHHHHHHH
T ss_pred --HHHh----cCHHHHHHHHHHhc
Confidence 9999 99999999999994
No 17
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.97 E-value=3.1e-30 Score=249.80 Aligned_cols=215 Identities=20% Similarity=0.318 Sum_probs=164.8
Q ss_pred CccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhhhhhccCccCccccchhhHHHHHHHHHHHHHHHhhhhhhhccccC
Q psy6269 1 SWEFGWILCDIWVSLDVCLCTASILSLCAISIDRYLAVTQPLTYSRKTRSKKLALYMILCVWVLALVITCPPILGWYDKD 80 (366)
Q Consensus 1 ~W~~g~~~C~~~~~l~~~~~~~S~~~l~~IaidRY~aV~~Pl~y~~~~~t~~~a~~~i~~~Wi~s~l~~~p~~~~~~~~~ 80 (366)
+|.+|+..|++..++..++..+|++++++||+|||++|++|++|+..+ +++++..+++++|++++++++|+.+......
T Consensus 189 ~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~-t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~ 267 (434)
T 4ea3_A 189 FWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVR-TSSKAQAVNVAIWALASVVGVPVAIMGSAQV 267 (434)
T ss_dssp SCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
T ss_pred CCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhEEEccccccccc-chhhhHHhhhhhhhHHHHHHhhHheeeeeEe
Confidence 499999999999999999999999999999999999999999998887 8888999999999999999999888655444
Q ss_pred CCCCCcccccCC-------cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccchhhHhHhhhhccc
Q psy6269 81 RHRDKRCGYNQN-------RGYVVFSGMGSFFIPLLVVLYVYARISCVIARRHNNLEALNHQHTLGRHELAKIKLRVRFN 153 (366)
Q Consensus 81 ~~~~~~C~~~~~-------~~~~~~~~~~~~~lP~~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (366)
..+...|..... ..+.....++.+++|+++++++|.+|++.+++++++.
T Consensus 268 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~------------------------ 323 (434)
T 4ea3_A 268 EDEEIECLVEIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLS------------------------ 323 (434)
T ss_dssp CSSCCCEEECCCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSCS------------------------
T ss_pred ecCceeEEEecCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc------------------------
Confidence 455667765432 2355667778899999999999999998887543221
Q ss_pred ccceeeeccccccCCCCcccccccccccccccccccccCCccccccccchhhhhhHHHHHHHHHHHHHHHHhchhHHHHH
Q psy6269 154 YCKVIIIKKTHLVLPSSSIMERDRRKSLASCSFSLQRSGLRLTDKCTRVSSLKRESKTAQTLSVVVGGFIACWLPFFIVY 233 (366)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~v~~~f~vcwlP~~i~~ 233 (366)
..+.+.++++|+++++++++++|++||+|+.++.
T Consensus 324 ----------------------------------------------~~~~~~~~~~~~~~~~~~vv~~F~i~w~P~~i~~ 357 (434)
T 4ea3_A 324 ----------------------------------------------GSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFV 357 (434)
T ss_dssp ----------------------------------------------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------------------cchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1113346789999999999999999999999999
Q ss_pred HHhhhCCCCCCC--hHHHHHHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEEEeec
Q psy6269 234 LANPFLPAGTIS--PLLSNSLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAVALHI 311 (366)
Q Consensus 234 ~~~~~~~~~~~~--~~~~~~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy~~~~ 311 (366)
++..+....... .....+..++.++|+++||+ +|++
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPi----------------------------------------IY~~-- 395 (434)
T 4ea3_A 358 LAQGLGVQPSSETAVAILRFCTALGYVNSCLNPI----------------------------------------LYAF-- 395 (434)
T ss_dssp HHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHH----------------------------------------HHHH--
T ss_pred HHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHH----------------------------------------HHHH--
Confidence 887664332222 23455667789999999999 9999
Q ss_pred cccchhHHHHHHHHhhhhc
Q psy6269 312 TVPRSDFRLAFWRLTLKHC 330 (366)
Q Consensus 312 ~~~~~~fR~~~~~~~~~~~ 330 (366)
.+++||+++++++++.+
T Consensus 396 --~~~~fR~~~~~~~~~~~ 412 (434)
T 4ea3_A 396 --LDENFKACFRKFCCASA 412 (434)
T ss_dssp --HCHHHHHHHC-------
T ss_pred --HHHHHHHHHHHHhCccc
Confidence 99999999999875433
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.97 E-value=5.4e-30 Score=253.45 Aligned_cols=236 Identities=30% Similarity=0.602 Sum_probs=174.8
Q ss_pred CccccccchhHHhHHHHHHHHHHHHHHHHHHHhhhhhhhccCccCccccchhhHHHHHHHHHHHHHHHhhhhhh-hcccc
Q psy6269 1 SWEFGWILCDIWVSLDVCLCTASILSLCAISIDRYLAVTQPLTYSRKTRSKKLALYMILCVWVLALVITCPPIL-GWYDK 79 (366)
Q Consensus 1 ~W~~g~~~C~~~~~l~~~~~~~S~~~l~~IaidRY~aV~~Pl~y~~~~~t~~~a~~~i~~~Wi~s~l~~~p~~~-~~~~~ 79 (366)
+|++|+..|++..++..++..+|++++++||+|||++|++|++|+.++ +++++..+++++|+++++++++|++ ++...
T Consensus 247 ~~~~~~~~C~~~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~-t~~~~~~~i~~~Wi~s~l~~~~p~~~~~~~~ 325 (514)
T 3sn6_R 247 TWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLL-TKNKARVIILMVWIVSGLTSFLPIQMHWYRA 325 (514)
T ss_dssp SCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHC-CHHHHHHHHHHHHHHHHHTTHHHHHTTTTC-
T ss_pred CeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhc-cchHHHHHHHHHHHHHHHHHhhhhhccceec
Confidence 599999999999999999999999999999999999999999998777 8888999999999999999977665 33322
Q ss_pred CCCCCCcc-------cccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccchhhHhHhhhhcc
Q psy6269 80 DRHRDKRC-------GYNQNRGYVVFSGMGSFFIPLLVVLYVYARISCVIARRHNNLEALNHQHTLGRHELAKIKLRVRF 152 (366)
Q Consensus 80 ~~~~~~~C-------~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (366)
...+...| .......|.....++.+++|+++++++|.+|++.++++.++.............
T Consensus 326 ~~~~~~~c~~~~~~~~~~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~----------- 394 (514)
T 3sn6_R 326 THQEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNL----------- 394 (514)
T ss_dssp --CHHHHHHHSSSCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----------------
T ss_pred ccCcccceeecccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccc-----------
Confidence 22222223 223345577788888899999999999999999999887765543221000000
Q ss_pred cccceeeeccccccCCCCcccccccccccccccccccccCCccccccccchhhhhhHHHHHHHHHHHHHHHHhchhHHHH
Q psy6269 153 NYCKVIIIKKTHLVLPSSSIMERDRRKSLASCSFSLQRSGLRLTDKCTRVSSLKRESKTAQTLSVVVGGFIACWLPFFIV 232 (366)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~v~~~f~vcwlP~~i~ 232 (366)
++ .. ..........+..+..++++|+++++++++++|++||+|+.++
T Consensus 395 ---------------------------~~-----~~-~~~~~~~~~~~~~~~~~~~~r~~~~l~~iv~~F~lcwlP~~i~ 441 (514)
T 3sn6_R 395 ---------------------------SQ-----VE-QDGRTGHGLRRSSKFCLKEHKALKTLGIIMGTFTLCWLPFFIV 441 (514)
T ss_dssp ----------------------------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------cc-----cc-ccccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00 0000000011223345789999999999999999999999999
Q ss_pred HHHhhhCCCCCCChHHHHHHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEEEeecc
Q psy6269 233 YLANPFLPAGTISPLLSNSLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAVALHIT 312 (366)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy~~~~~ 312 (366)
.++..+.+ .........+..++.++||++||+ ||+
T Consensus 442 ~~~~~~~~-~~~~~~~~~~~~~l~~~ns~~NPi----------------------------------------IY~---- 476 (514)
T 3sn6_R 442 NIVHVIQD-NLIRKEVYILLNWIGYVNSGFNPL----------------------------------------IYC---- 476 (514)
T ss_dssp HHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHH----------------------------------------HHT----
T ss_pred HHHHHHcc-cccchHHHHHHHHHHHHHHhhhHH----------------------------------------hhc----
Confidence 99887743 345567778888999999999999 993
Q ss_pred ccchhHHHHHHHHhh
Q psy6269 313 VPRSDFRLAFWRLTL 327 (366)
Q Consensus 313 ~~~~~fR~~~~~~~~ 327 (366)
++++||++++++++
T Consensus 477 -~~~~fR~~~~~~l~ 490 (514)
T 3sn6_R 477 -RSPDFRIAFQELLC 490 (514)
T ss_dssp -TCHHHHHHHHTTCC
T ss_pred -CCHHHHHHHHHHhC
Confidence 57999999999984
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.44 E-value=4.6e-08 Score=57.45 Aligned_cols=27 Identities=52% Similarity=0.915 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHhhhhhhhccCccCccc
Q psy6269 22 ASILSLCAISIDRYLAVTQPLTYSRKT 48 (366)
Q Consensus 22 ~S~~~l~~IaidRY~aV~~Pl~y~~~~ 48 (366)
+|++++++||+|||++|++|++|...+
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~ 28 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKR 28 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhccccc
Confidence 689999999999999999999988776
No 20
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=98.06 E-value=4.1e-07 Score=53.69 Aligned_cols=30 Identities=23% Similarity=0.633 Sum_probs=26.1
Q ss_pred hHHHHHHHHHHHHHHHHhchhHHHHHHHhh
Q psy6269 208 ESKTAQTLSVVVGGFIACWLPFFIVYLANP 237 (366)
Q Consensus 208 ~~k~~k~l~~v~~~f~vcwlP~~i~~~~~~ 237 (366)
|+|++|++++++++|++||+||++..++..
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~~ 30 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAHSL 30 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTTTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHHHH
Confidence 457889999999999999999999877643
No 21
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=98.05 E-value=1.5e-06 Score=78.50 Aligned_cols=45 Identities=36% Similarity=0.644 Sum_probs=39.4
Q ss_pred hhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccce
Q psy6269 260 GSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPF 305 (366)
Q Consensus 260 s~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (366)
..+.-+||.++++++.++|++||++|+|+.|||+||+++++. +|+
T Consensus 22 ~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l~-~p~ 66 (296)
T 2lnl_A 22 FLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALT-LPI 66 (296)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHh-hhH
Confidence 345567999999999999999999999999999999999865 444
No 22
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=98.04 E-value=8.4e-07 Score=54.82 Aligned_cols=36 Identities=22% Similarity=0.202 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEEEeeccccchhHHHHHHHHhh
Q psy6269 248 LSNSLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAVALHITVPRSDFRLAFWRLTL 327 (366)
Q Consensus 248 ~~~~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy~~~~~~~~~~fR~~~~~~~~ 327 (366)
++.++.+++++||++||+ +|++ .+++||++++++++
T Consensus 2 ~~~~~~~l~~~ns~lNPi----------------------------------------IY~~----~~~~fr~~~~~~~~ 37 (40)
T 2koe_A 2 VFAFASMLCLLNSTVNPI----------------------------------------IYAL----RSKDLRHAFRSMFP 37 (40)
T ss_dssp HHHHHHHHHHHHHHSSTT----------------------------------------TTBT----TBHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHHH----------------------------------------HHHH----ccHHHHHHHHHHhh
Confidence 356778899999999999 9999 99999999999873
No 23
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=97.90 E-value=5.1e-06 Score=81.40 Aligned_cols=66 Identities=21% Similarity=0.257 Sum_probs=45.5
Q ss_pred hhccccchhhhhhhhhccccc---cchhhHHHHHHHHHHHhhhhccceEEEeec-cccchhHHHHHHHHh
Q psy6269 261 SLRLFGNTLIIISVLTTRRLR---TVTNCFVMSLAVADWLVGIFVMPFAVALHI-TVPRSDFRLAFWRLT 326 (366)
Q Consensus 261 ~vNP~~n~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~iy~~~~-~~~~~~fR~~~~~~~ 326 (366)
++.-+||+++++++.++|++| |++|+||.|||+||++++++.+|+...... ....+.|...+.++.
T Consensus 44 ~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~C~~~ 113 (510)
T 4grv_A 44 VVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCRGY 113 (510)
T ss_dssp HHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHHHHHH
T ss_pred HHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHHHHHH
Confidence 445579999999999887655 789999999999999999999996322111 002355666665544
No 24
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=97.86 E-value=7.1e-06 Score=80.10 Aligned_cols=50 Identities=44% Similarity=0.676 Sum_probs=43.8
Q ss_pred HhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEE
Q psy6269 258 LSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAV 307 (366)
Q Consensus 258 ~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy 307 (366)
+-.++.-+||+++++++.+++++|+++|+||.|||+||++++++.+|+..
T Consensus 49 ~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~ 98 (500)
T 2rh1_A 49 LIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGA 98 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455567999999999999999999999999999999999999988643
No 25
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=97.79 E-value=8.6e-06 Score=79.95 Aligned_cols=48 Identities=17% Similarity=0.376 Sum_probs=42.6
Q ss_pred hhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEE
Q psy6269 260 GSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAV 307 (366)
Q Consensus 260 s~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy 307 (366)
.++.-+||+++++++.+++++|+++|+||.|||+||++++++..|+..
T Consensus 74 ~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~ 121 (520)
T 3v2y_A 74 CCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLL 121 (520)
T ss_dssp HHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556999999999999999999999999999999999998888654
No 26
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=97.77 E-value=1.2e-05 Score=76.65 Aligned_cols=58 Identities=36% Similarity=0.544 Sum_probs=48.8
Q ss_pred HHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEEE
Q psy6269 251 SLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAVA 308 (366)
Q Consensus 251 ~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy~ 308 (366)
+...+..+-.++.-+||.++++++.+++++|+++|+||.|||+||++++++.+|+...
T Consensus 33 ~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~ 90 (447)
T 4eiy_A 33 VYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT 90 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445556677789999999999999999999999999999999999999986543
No 27
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=97.75 E-value=1.6e-05 Score=77.04 Aligned_cols=62 Identities=24% Similarity=0.321 Sum_probs=48.5
Q ss_pred hHHHHHHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEEE
Q psy6269 246 PLLSNSLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAVA 308 (366)
Q Consensus 246 ~~~~~~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy~ 308 (366)
.....+...+..+-.++.-+||+++++++.+++++|+++|+||.|||+||++++ +.+|+...
T Consensus 45 ~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~ 106 (502)
T 3odu_A 45 NFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAV 106 (502)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 333444444445555667789999999999999999999999999999999995 67776543
No 28
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=97.71 E-value=1.2e-05 Score=72.62 Aligned_cols=57 Identities=42% Similarity=0.640 Sum_probs=47.5
Q ss_pred HHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEE
Q psy6269 251 SLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAV 307 (366)
Q Consensus 251 ~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy 307 (366)
....+..+-..+.-+||.++++++.+.+++|+++|+|+.|||+||++++++..|+..
T Consensus 13 ~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~ 69 (315)
T 4amj_A 13 GMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGA 69 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHH
Confidence 334444455566677999999999999999999999999999999999998888643
No 29
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=97.70 E-value=2.3e-05 Score=72.71 Aligned_cols=48 Identities=29% Similarity=0.453 Sum_probs=42.5
Q ss_pred hhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEE
Q psy6269 260 GSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAV 307 (366)
Q Consensus 260 s~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy 307 (366)
..+.-+||.++++++.++|++|+++|+|+.|||+||++++++..|+..
T Consensus 43 ~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~ 90 (364)
T 2ks9_A 43 VVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNF 90 (364)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455567999999999999999999999999999999999998888643
No 30
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=97.69 E-value=2.6e-05 Score=71.68 Aligned_cols=52 Identities=25% Similarity=0.179 Sum_probs=44.4
Q ss_pred HHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEE
Q psy6269 256 GKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAV 307 (366)
Q Consensus 256 ~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy 307 (366)
..+-..+.-+||.++++++.+++++|+++|+|+.|||+||+++++...|...
T Consensus 45 ~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~ 96 (349)
T 1u19_A 45 MFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTL 96 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHH
Confidence 3334455567999999999999999999999999999999999998888654
No 31
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=97.67 E-value=1.9e-05 Score=76.15 Aligned_cols=51 Identities=41% Similarity=0.659 Sum_probs=44.3
Q ss_pred HhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEEE
Q psy6269 258 LSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAVA 308 (366)
Q Consensus 258 ~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy~ 308 (366)
+-.++.-+||+++++++.+.+++|+++|+||.|||+||++++++.+|+...
T Consensus 30 ~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~ 80 (488)
T 3eml_A 30 AIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAIT 80 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334555679999999999999999999999999999999999999986543
No 32
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=97.66 E-value=1.9e-05 Score=75.70 Aligned_cols=53 Identities=34% Similarity=0.614 Sum_probs=45.1
Q ss_pred HHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEE
Q psy6269 255 LGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAV 307 (366)
Q Consensus 255 l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy 307 (366)
+..+-.++.-+||.++++++.+.+++|+++|+||.|||+||++++++..|+..
T Consensus 29 ~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~ 81 (467)
T 3uon_A 29 VAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYT 81 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344456667999999999999999999999999999999999999888643
No 33
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=97.65 E-value=2.1e-05 Score=75.32 Aligned_cols=57 Identities=28% Similarity=0.470 Sum_probs=46.8
Q ss_pred HHHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEE
Q psy6269 250 NSLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAV 307 (366)
Q Consensus 250 ~~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy 307 (366)
.+...+..+-..+.-+||+++++++.+++++|+++|+|++|||+||++++++ +|+..
T Consensus 18 ~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~ 74 (464)
T 4dkl_A 18 ITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQS 74 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 3344444555667778999999999999999999999999999999999887 77643
No 34
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=97.63 E-value=2.4e-05 Score=75.54 Aligned_cols=58 Identities=19% Similarity=0.194 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceE
Q psy6269 248 LSNSLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFA 306 (366)
Q Consensus 248 ~~~~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 306 (366)
...+...+..+-.++.-+||.++++++.+++++|+++|+||.|||+||++++++ +|+.
T Consensus 19 ~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~-~~~~ 76 (484)
T 3vw7_A 19 LTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSV-LPFK 76 (484)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTT-HHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 333444444455567778999999999999999999999999999999999765 4443
No 35
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=97.63 E-value=1.2e-05 Score=76.95 Aligned_cols=65 Identities=28% Similarity=0.403 Sum_probs=49.3
Q ss_pred hhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEEEeeccccchhHHHHHHH
Q psy6269 259 SGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAVALHITVPRSDFRLAFWR 324 (366)
Q Consensus 259 ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy~~~~~~~~~~fR~~~~~ 324 (366)
-.++.-+||.++++++.+++++|+++|+||.|||+||++++++.+|+....... .++.|.....+
T Consensus 18 ~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~-~~~~~~~~~C~ 82 (452)
T 3rze_A 18 ICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLM-SKWSLGRPLCL 82 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHS-SSCSSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccCCchhHh
Confidence 344556699999999999999999999999999999999999888876443211 23444444444
No 36
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=97.59 E-value=2.3e-05 Score=76.74 Aligned_cols=59 Identities=37% Similarity=0.548 Sum_probs=48.6
Q ss_pred HHHHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEE
Q psy6269 249 SNSLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAV 307 (366)
Q Consensus 249 ~~~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy 307 (366)
..+...+..+-.++.-+||.++++++.+.+++|+++|+||.|||+||++++++.+|+..
T Consensus 182 ~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~ 240 (514)
T 3sn6_R 182 VVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGA 240 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHH
Confidence 33344445555667778999999999999999999999999999999999998888643
No 37
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=97.57 E-value=5.4e-05 Score=72.48 Aligned_cols=59 Identities=25% Similarity=0.401 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhc-cceE
Q psy6269 248 LSNSLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFV-MPFA 306 (366)
Q Consensus 248 ~~~~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i 306 (366)
...+...+..+-.++.-+||.++++++.+.|++|+++|+|+.|||+||++++++. +|+.
T Consensus 33 ~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~ 92 (448)
T 2z73_A 33 VYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLM 92 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHH
Confidence 3444444455556667789999999999999999999999999999999998874 6654
No 38
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=97.50 E-value=5.2e-05 Score=72.42 Aligned_cols=58 Identities=29% Similarity=0.462 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhhhhccccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEE
Q psy6269 249 SNSLTWLGKLSGSLRLFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAV 307 (366)
Q Consensus 249 ~~~~~~l~~~ns~vNP~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy 307 (366)
..+...+..+-..+.-+||.++++++.+++++|+++|+||.|||++|+++ ++.+|+..
T Consensus 125 ~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~ 182 (434)
T 4ea3_A 125 KVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQG 182 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHH
Confidence 33333444444556677999999999999999999999999999999998 56666543
No 39
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=97.50 E-value=3.2e-05 Score=74.51 Aligned_cols=44 Identities=55% Similarity=0.834 Sum_probs=40.6
Q ss_pred cccchhhhhhhhhccccccchhhHHHHHHHHHHHhhhhccceEE
Q psy6269 264 LFGNTLIIISVLTTRRLRTVTNCFVMSLAVADWLVGIFVMPFAV 307 (366)
Q Consensus 264 P~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iy 307 (366)
-+||.++++++.+++++|+++|+||.|||+||++++++.+|+..
T Consensus 53 ~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~ 96 (481)
T 3pbl_A 53 VFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVV 96 (481)
T ss_dssp HHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45999999999999999999999999999999999999998654
No 40
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=50.69 E-value=9.4 Score=19.62 Aligned_cols=14 Identities=36% Similarity=0.387 Sum_probs=10.9
Q ss_pred hhHHHHHHHHhhhh
Q psy6269 316 SDFRLAFWRLTLKH 329 (366)
Q Consensus 316 ~~fR~~~~~~~~~~ 329 (366)
+.||+.++++|.+.
T Consensus 4 krfrkkfkklfkkl 17 (27)
T 2ket_A 4 KRFRKKFKKLFKKL 17 (27)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc
Confidence 57888888888654
No 41
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=48.57 E-value=27 Score=20.24 Aligned_cols=27 Identities=22% Similarity=0.266 Sum_probs=15.9
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHhhhhhh
Q psy6269 105 FIPLLVV-LYVYARISCVIARRHNNLEA 131 (366)
Q Consensus 105 ~lP~~ii-~~~y~~I~~~lr~~~~~~~~ 131 (366)
++|++++ ++.|..+.|--+|++++..+
T Consensus 6 ~l~~v~~~~ifYFl~iRPQ~Kr~K~~~~ 33 (37)
T 2rdd_B 6 ILMLVVFGLIFYFMILRPQQKRTKEHKK 33 (37)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 3454444 66788777766665555443
No 42
>2jx4_A Vasopressin V2 receptor; protein, G-protein coupled receptor, glycoprotein, lipoprotein, membrane, palmitate, phosphorylation, receptor transducer; HET: DGN NLE CCS; NMR {Synthetic}
Probab=27.78 E-value=75 Score=19.79 Aligned_cols=13 Identities=15% Similarity=-0.212 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHhh
Q psy6269 115 YARISCVIARRHN 127 (366)
Q Consensus 115 y~~I~~~lr~~~~ 127 (366)
|.+|++.+|++.+
T Consensus 2 y~~I~~~Iw~~~~ 14 (52)
T 2jx4_A 2 QVLIFREIHASLV 14 (52)
T ss_dssp CHHHHHHHHHHHT
T ss_pred eEEEEeHHHhhCC
Confidence 6778888887754
Done!