Query psy6272
Match_columns 547
No_of_seqs 264 out of 1587
Neff 5.7
Searched_HMMs 29240
Date Fri Aug 16 22:10:04 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy6272.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/6272hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gr4_A Pyruvate kinase isozyme 100.0 3E-139 1E-143 1134.4 55.7 519 10-545 14-550 (550)
2 3hqn_D Pyruvate kinase, PK; TI 100.0 4E-130 1E-134 1055.2 51.1 479 38-544 6-498 (499)
3 4drs_A Pyruvate kinase; glycol 100.0 3E-129 1E-133 1054.9 53.2 480 33-545 25-526 (526)
4 3khd_A Pyruvate kinase; malari 100.0 3E-129 1E-133 1050.4 48.1 463 48-544 41-519 (520)
5 3gg8_A Pyruvate kinase; malari 100.0 2E-127 6E-132 1036.2 51.0 463 51-545 34-511 (511)
6 3t05_A Pyruvate kinase, PK; te 100.0 5E-126 2E-130 1044.2 49.0 469 39-545 10-494 (606)
7 1e0t_A Pyruvate kinase, PK; ph 100.0 1E-124 3E-129 1010.0 49.8 455 52-544 1-470 (470)
8 1a3w_A Pyruvate kinase; allost 100.0 3E-125 1E-129 1021.4 44.6 484 35-544 2-500 (500)
9 2e28_A Pyruvate kinase, PK; al 100.0 8E-122 3E-126 1012.3 53.9 456 52-544 2-474 (587)
10 3qtg_A Pyruvate kinase, PK; TI 100.0 1E-120 4E-125 971.9 41.5 431 51-542 13-460 (461)
11 1izc_A Macrophomate synthase i 99.8 7.8E-19 2.7E-23 182.7 12.8 143 243-402 108-301 (339)
12 2v5j_A 2,4-dihydroxyhept-2-ENE 99.7 7.5E-18 2.6E-22 171.6 11.7 130 240-386 99-263 (287)
13 2vws_A YFAU, 2-keto-3-deoxy su 99.7 1.3E-17 4.4E-22 168.1 10.8 129 241-386 79-242 (267)
14 3qz6_A HPCH/HPAI aldolase; str 99.7 3.8E-17 1.3E-21 164.3 13.9 129 242-386 78-241 (261)
15 1dxe_A 2-dehydro-3-deoxy-galac 99.7 7.9E-17 2.7E-21 161.3 12.7 130 240-386 79-242 (256)
16 1sgj_A Citrate lyase, beta sub 99.6 3.6E-15 1.2E-19 151.2 10.4 142 234-385 75-225 (284)
17 2xz9_A Phosphoenolpyruvate-pro 99.4 7.6E-13 2.6E-17 136.9 11.6 140 233-386 116-282 (324)
18 3qll_A Citrate lyase; beta bar 99.2 7.9E-11 2.7E-15 121.4 13.2 141 232-380 106-256 (316)
19 2ols_A Phosphoenolpyruvate syn 99.2 2.8E-11 9.6E-16 138.4 10.5 136 237-386 622-782 (794)
20 2hwg_A Phosphoenolpyruvate-pro 99.2 1.4E-10 4.8E-15 128.1 14.2 134 239-386 371-531 (575)
21 1u5h_A CITE; TIM barrel, struc 99.1 1.2E-10 4E-15 117.6 11.1 126 239-380 71-209 (273)
22 2wqd_A Phosphoenolpyruvate-pro 99.1 1.1E-10 3.6E-15 129.0 11.4 130 240-383 374-530 (572)
23 3qqw_A Putative citrate lyase; 99.1 2.2E-10 7.5E-15 118.8 12.1 155 238-401 94-286 (332)
24 3r4i_A Citrate lyase; TIM beta 99.1 9.1E-10 3.1E-14 114.5 15.5 153 240-401 95-285 (339)
25 3oyz_A Malate synthase; TIM ba 98.7 1.8E-08 6.3E-13 107.1 9.5 137 238-383 94-261 (433)
26 1vbg_A Pyruvate,orthophosphate 98.5 1.4E-07 4.8E-12 108.7 9.0 120 252-385 701-864 (876)
27 1kbl_A PPDK, pyruvate phosphat 98.4 3.8E-07 1.3E-11 105.1 8.2 133 239-385 677-858 (873)
28 3cuz_A MSA, malate synthase A; 98.0 6.7E-05 2.3E-09 82.0 15.5 148 240-390 193-375 (532)
29 3cux_A Malate synthase; TIM ba 97.9 4.7E-05 1.6E-09 83.1 11.7 143 242-388 192-371 (528)
30 1p7t_A MSG, malate synthase G; 97.6 0.00011 3.9E-09 81.9 9.0 138 241-386 371-541 (731)
31 1h6z_A Pyruvate phosphate diki 97.6 0.00029 9.8E-09 81.5 11.9 138 234-385 699-884 (913)
32 2x0s_A Pyruvate phosphate diki 96.7 0.0075 2.6E-07 70.1 12.3 116 255-384 727-883 (913)
33 4af0_A Inosine-5'-monophosphat 96.6 0.044 1.5E-06 59.9 16.3 126 237-380 278-413 (556)
34 4fo4_A Inosine 5'-monophosphat 95.9 0.18 6.1E-06 52.7 16.4 124 239-380 107-240 (366)
35 3ffs_A Inosine-5-monophosphate 95.4 0.16 5.5E-06 53.7 13.8 119 242-380 146-275 (400)
36 3usb_A Inosine-5'-monophosphat 95.3 0.32 1.1E-05 52.9 16.1 126 238-380 254-388 (511)
37 4avf_A Inosine-5'-monophosphat 95.2 0.31 1.1E-05 52.6 15.7 124 238-380 227-361 (490)
38 4fxs_A Inosine-5'-monophosphat 95.0 0.45 1.5E-05 51.5 16.2 124 239-380 230-363 (496)
39 3khj_A Inosine-5-monophosphate 95.0 0.46 1.6E-05 49.4 15.4 119 242-380 107-236 (361)
40 1jqo_A Phosphoenolpyruvate car 94.9 0.12 4E-06 60.3 11.8 106 238-343 511-638 (970)
41 1vp8_A Hypothetical protein AF 94.6 0.15 5E-06 48.8 9.6 110 421-533 26-171 (201)
42 3odm_A Pepcase, PEPC, phosphoe 94.6 0.1 3.4E-06 57.0 9.4 92 251-342 138-259 (560)
43 1t57_A Conserved protein MTH16 94.4 0.09 3.1E-06 50.4 7.7 48 421-469 34-81 (206)
44 2z6i_A Trans-2-enoyl-ACP reduc 94.2 0.4 1.4E-05 48.9 12.8 111 242-380 78-191 (332)
45 3r2g_A Inosine 5'-monophosphat 94.1 0.69 2.4E-05 48.2 14.2 120 239-380 99-228 (361)
46 1jcn_A Inosine monophosphate d 93.8 1.2 3.9E-05 48.2 16.0 120 240-380 255-387 (514)
47 3f4w_A Putative hexulose 6 pho 93.8 0.64 2.2E-05 43.6 12.3 116 244-380 69-187 (211)
48 3bo9_A Putative nitroalkan dio 93.4 0.83 2.9E-05 46.5 13.2 113 241-380 91-205 (326)
49 3inp_A D-ribulose-phosphate 3- 93.2 0.54 1.8E-05 46.5 11.0 118 244-380 101-223 (246)
50 1jqn_A Pepcase, PEPC, phosphoe 92.9 0.31 1.1E-05 56.3 10.0 102 242-343 455-578 (883)
51 2c6q_A GMP reductase 2; TIM ba 92.8 1.3 4.4E-05 45.8 13.6 123 240-380 118-252 (351)
52 3i65_A Dihydroorotate dehydrog 92.7 2.1 7.1E-05 45.4 15.4 108 280-402 268-395 (415)
53 3bw2_A 2-nitropropane dioxygen 92.5 2.4 8.2E-05 43.7 15.4 113 242-380 112-237 (369)
54 1jub_A Dihydroorotate dehydrog 92.3 3.1 0.00011 41.5 15.5 144 242-402 109-292 (311)
55 1gte_A Dihydropyrimidine dehyd 92.2 1.2 4.2E-05 52.1 14.1 121 243-380 652-816 (1025)
56 1eep_A Inosine 5'-monophosphat 92.1 2.1 7.2E-05 44.7 14.5 121 240-380 153-285 (404)
57 1ypf_A GMP reductase; GUAC, pu 92.1 1.5 5E-05 44.9 13.0 122 238-380 104-239 (336)
58 3zwt_A Dihydroorotate dehydrog 91.7 4.1 0.00014 42.3 16.1 149 239-402 160-348 (367)
59 1f76_A Dihydroorotate dehydrog 91.7 3.8 0.00013 41.5 15.5 115 251-380 164-318 (336)
60 3ovp_A Ribulose-phosphate 3-ep 91.2 0.61 2.1E-05 45.3 8.6 114 244-380 79-197 (228)
61 1me8_A Inosine-5'-monophosphat 91.2 3.3 0.00011 44.6 15.2 121 242-380 244-381 (503)
62 1y0e_A Putative N-acetylmannos 90.6 3.6 0.00012 38.7 13.2 118 242-380 78-204 (223)
63 1h1y_A D-ribulose-5-phosphate 90.4 2.8 9.7E-05 40.1 12.5 116 244-380 79-201 (228)
64 2gjl_A Hypothetical protein PA 90.4 2.1 7.2E-05 43.3 12.1 111 242-380 86-201 (328)
65 1vrd_A Inosine-5'-monophosphat 90.4 4.4 0.00015 43.3 15.2 124 239-380 236-369 (494)
66 1zfj_A Inosine monophosphate d 89.9 5.1 0.00018 42.6 15.2 125 239-380 232-365 (491)
67 3igs_A N-acetylmannosamine-6-p 89.9 4.7 0.00016 39.1 13.6 116 241-380 90-210 (232)
68 3ctl_A D-allulose-6-phosphate 89.7 3.6 0.00012 40.0 12.6 134 244-396 72-217 (231)
69 1vhc_A Putative KHG/KDPG aldol 89.1 4.8 0.00017 38.9 12.9 105 242-380 32-137 (224)
70 1tv5_A Dhodehase, dihydroorota 88.9 8.6 0.00029 41.0 15.8 106 280-401 296-422 (443)
71 3jr2_A Hexulose-6-phosphate sy 88.9 4.2 0.00014 38.6 12.2 114 244-380 75-194 (218)
72 2qr6_A IMP dehydrogenase/GMP r 88.5 3.2 0.00011 43.1 12.0 114 244-380 170-306 (393)
73 1tqj_A Ribulose-phosphate 3-ep 88.1 2.7 9.3E-05 40.5 10.5 118 244-380 77-201 (230)
74 4g9p_A 4-hydroxy-3-methylbut-2 87.9 3.1 0.00011 43.9 11.3 100 241-344 40-144 (406)
75 1geq_A Tryptophan synthase alp 87.8 9.2 0.00031 36.5 14.1 119 242-380 98-220 (248)
76 3ble_A Citramalate synthase fr 87.5 9.7 0.00033 38.9 14.7 142 235-386 36-193 (337)
77 2e6f_A Dihydroorotate dehydrog 87.3 5.2 0.00018 39.9 12.3 143 242-401 109-293 (314)
78 1wbh_A KHG/KDPG aldolase; lyas 86.9 8.6 0.00029 36.8 13.1 105 242-380 31-136 (214)
79 3qja_A IGPS, indole-3-glycerol 86.8 11 0.00038 37.4 14.3 112 244-380 127-242 (272)
80 1ydn_A Hydroxymethylglutaryl-C 86.6 4.5 0.00015 40.3 11.3 132 237-380 23-175 (295)
81 1yad_A Regulatory protein TENI 86.5 14 0.00049 34.6 14.4 111 245-380 81-192 (221)
82 1ep3_A Dihydroorotate dehydrog 86.3 12 0.0004 36.9 14.3 124 239-380 110-270 (311)
83 3q58_A N-acetylmannosamine-6-p 85.8 5.4 0.00018 38.6 11.1 116 241-380 90-210 (229)
84 3vnd_A TSA, tryptophan synthas 85.8 3.6 0.00012 41.0 10.1 120 242-380 113-235 (267)
85 4ef8_A Dihydroorotate dehydrog 85.8 9.9 0.00034 39.3 13.7 137 250-403 153-328 (354)
86 3ajx_A 3-hexulose-6-phosphate 85.7 4.1 0.00014 37.9 9.9 115 244-380 69-186 (207)
87 3nav_A Tryptophan synthase alp 85.6 4.3 0.00015 40.5 10.5 118 242-380 115-237 (271)
88 2fli_A Ribulose-phosphate 3-ep 85.5 8.8 0.0003 35.8 12.2 118 244-380 76-198 (220)
89 3cu2_A Ribulose-5-phosphate 3- 85.3 4.6 0.00016 39.5 10.3 120 242-380 82-217 (237)
90 2yw3_A 4-hydroxy-2-oxoglutarat 84.7 8.4 0.00029 36.5 11.7 103 242-380 28-131 (207)
91 3tha_A Tryptophan synthase alp 84.3 9.8 0.00033 37.6 12.3 117 242-380 106-227 (252)
92 1p0k_A Isopentenyl-diphosphate 84.3 22 0.00074 36.1 15.4 30 337-380 251-280 (349)
93 1h5y_A HISF; histidine biosynt 84.1 11 0.00036 35.5 12.2 116 241-380 88-227 (253)
94 1ka9_F Imidazole glycerol phos 83.5 14 0.00048 35.2 12.9 119 241-380 86-225 (252)
95 4e38_A Keto-hydroxyglutarate-a 83.4 10 0.00036 36.9 12.0 105 242-380 49-154 (232)
96 1thf_D HISF protein; thermophI 83.3 12 0.0004 35.8 12.3 117 241-380 85-224 (253)
97 1rpx_A Protein (ribulose-phosp 83.3 7.3 0.00025 36.9 10.7 119 243-380 82-207 (230)
98 1yxy_A Putative N-acetylmannos 82.8 20 0.00068 33.9 13.6 117 241-380 90-215 (234)
99 1h1y_A D-ribulose-5-phosphate 82.5 8.3 0.00029 36.7 10.8 110 242-379 22-144 (228)
100 3daq_A DHDPS, dihydrodipicolin 82.2 12 0.00042 37.3 12.3 98 242-343 26-134 (292)
101 1mxs_A KDPG aldolase; 2-keto-3 81.9 11 0.00038 36.3 11.5 105 242-380 41-146 (225)
102 3rmj_A 2-isopropylmalate synth 81.9 42 0.0014 34.7 16.6 141 235-386 29-181 (370)
103 1vzw_A Phosphoribosyl isomeras 81.7 7.9 0.00027 36.9 10.3 116 241-380 86-222 (244)
104 2cu0_A Inosine-5'-monophosphat 81.6 23 0.00078 37.8 14.9 118 242-380 230-357 (486)
105 1xi3_A Thiamine phosphate pyro 81.3 31 0.0011 31.7 14.1 106 245-380 79-190 (215)
106 2ekc_A AQ_1548, tryptophan syn 81.2 8.3 0.00029 37.8 10.5 119 242-380 112-234 (262)
107 3fkr_A L-2-keto-3-deoxyarabona 81.0 9.5 0.00032 38.5 11.1 99 242-343 32-143 (309)
108 3tsm_A IGPS, indole-3-glycerol 81.0 30 0.001 34.4 14.5 110 244-380 134-249 (272)
109 2y88_A Phosphoribosyl isomeras 80.9 6.6 0.00023 37.3 9.4 116 241-380 85-225 (244)
110 3b4u_A Dihydrodipicolinate syn 80.6 18 0.0006 36.1 12.8 99 242-343 27-139 (294)
111 2v82_A 2-dehydro-3-deoxy-6-pho 80.4 19 0.00067 33.4 12.4 103 244-380 24-128 (212)
112 1kbi_A Cytochrome B2, L-LCR; f 80.0 20 0.00069 38.8 13.8 99 264-386 332-437 (511)
113 1wa3_A 2-keto-3-deoxy-6-phosph 79.7 29 0.001 31.9 13.3 100 245-380 28-131 (205)
114 3nvt_A 3-deoxy-D-arabino-heptu 79.7 9.6 0.00033 39.9 10.8 112 242-379 159-282 (385)
115 3oix_A Putative dihydroorotate 79.5 30 0.001 35.5 14.4 148 239-402 140-325 (345)
116 1zco_A 2-dehydro-3-deoxyphosph 79.2 14 0.00048 36.5 11.4 109 240-374 38-158 (262)
117 1ujp_A Tryptophan synthase alp 79.2 10 0.00035 37.7 10.4 118 242-380 109-229 (271)
118 2gou_A Oxidoreductase, FMN-bin 79.1 27 0.00093 35.9 14.0 120 236-380 150-322 (365)
119 3qze_A DHDPS, dihydrodipicolin 79.0 13 0.00045 37.6 11.3 98 242-343 47-155 (314)
120 3dwg_A Cysteine synthase B; su 78.5 11 0.00038 38.0 10.6 120 328-472 87-215 (325)
121 3s5o_A 4-hydroxy-2-oxoglutarat 78.4 15 0.0005 37.0 11.5 99 242-343 38-148 (307)
122 2ftp_A Hydroxymethylglutaryl-C 78.3 16 0.00054 36.6 11.6 136 236-380 26-179 (302)
123 3hgj_A Chromate reductase; TIM 77.6 23 0.0008 36.1 12.9 129 236-380 141-318 (349)
124 3l21_A DHDPS, dihydrodipicolin 77.3 12 0.00041 37.6 10.4 98 242-343 39-147 (304)
125 3tbh_A O-acetyl serine sulfhyd 77.3 12 0.00041 37.9 10.5 119 329-472 87-215 (334)
126 1qop_A Tryptophan synthase alp 77.3 10 0.00035 37.2 9.7 118 242-380 112-234 (268)
127 3m5v_A DHDPS, dihydrodipicolin 77.2 16 0.00053 36.6 11.2 98 242-343 31-140 (301)
128 1ve1_A O-acetylserine sulfhydr 76.9 18 0.0006 35.9 11.5 118 329-472 77-204 (304)
129 1f6k_A N-acetylneuraminate lya 76.8 31 0.0011 34.2 13.3 98 242-343 27-136 (293)
130 2wkj_A N-acetylneuraminate lya 76.5 22 0.00077 35.6 12.1 98 242-343 35-144 (303)
131 3ih1_A Methylisocitrate lyase; 76.3 59 0.002 32.9 15.2 128 242-399 107-261 (305)
132 4aec_A Cysteine synthase, mito 76.1 9.3 0.00032 40.6 9.5 119 329-472 190-318 (430)
133 1q6o_A Humps, 3-keto-L-gulonat 75.5 23 0.0008 33.2 11.4 112 246-380 74-191 (216)
134 1ydo_A HMG-COA lyase; TIM-barr 75.5 45 0.0015 33.5 14.1 141 235-386 23-181 (307)
135 2yxg_A DHDPS, dihydrodipicolin 75.5 22 0.00074 35.3 11.7 98 242-343 24-132 (289)
136 3kts_A Glycerol uptake operon 75.3 6.7 0.00023 37.3 7.4 124 240-380 17-179 (192)
137 1z7w_A Cysteine synthase; tran 75.2 13 0.00043 37.3 9.9 122 329-472 82-210 (322)
138 1vyr_A Pentaerythritol tetrani 75.0 41 0.0014 34.6 13.9 121 236-380 150-323 (364)
139 1rpx_A Protein (ribulose-phosp 74.9 23 0.00077 33.4 11.2 90 242-344 26-125 (230)
140 2r8w_A AGR_C_1641P; APC7498, d 74.8 23 0.00077 36.1 11.8 98 242-343 58-166 (332)
141 3e96_A Dihydrodipicolinate syn 74.7 20 0.00068 36.2 11.2 98 242-343 36-143 (316)
142 1tqx_A D-ribulose-5-phosphate 74.4 6.8 0.00023 38.0 7.4 108 253-380 86-201 (227)
143 3si9_A DHDPS, dihydrodipicolin 74.0 15 0.00053 37.1 10.2 98 242-343 46-154 (315)
144 2ehh_A DHDPS, dihydrodipicolin 74.0 23 0.0008 35.2 11.5 98 242-343 24-132 (294)
145 2v9d_A YAGE; dihydrodipicolini 73.8 16 0.00053 37.5 10.3 98 242-343 55-163 (343)
146 2rfg_A Dihydrodipicolinate syn 73.6 21 0.00071 35.7 11.0 98 242-343 24-132 (297)
147 1j0a_A 1-aminocyclopropane-1-c 73.3 23 0.00079 35.4 11.4 121 329-471 87-218 (325)
148 1xky_A Dihydrodipicolinate syn 73.2 21 0.00071 35.8 10.9 98 242-343 36-144 (301)
149 1w8s_A FBP aldolase, fructose- 73.2 29 0.00098 34.1 11.7 122 238-380 39-179 (263)
150 3qz6_A HPCH/HPAI aldolase; str 73.1 20 0.0007 35.2 10.6 99 270-390 6-105 (261)
151 3b0p_A TRNA-dihydrouridine syn 72.7 26 0.00089 35.8 11.7 124 240-380 71-225 (350)
152 1y7l_A O-acetylserine sulfhydr 72.5 23 0.0008 35.1 11.1 119 329-472 77-207 (316)
153 3flu_A DHDPS, dihydrodipicolin 72.3 27 0.00092 34.8 11.5 98 242-343 31-139 (297)
154 3dz1_A Dihydrodipicolinate syn 72.2 37 0.0013 34.1 12.5 96 242-343 32-140 (313)
155 2v5j_A 2,4-dihydroxyhept-2-ENE 72.2 26 0.0009 34.9 11.3 96 270-389 30-127 (287)
156 2egu_A Cysteine synthase; O-ac 72.1 20 0.00068 35.5 10.5 121 329-472 80-207 (308)
157 2q3b_A Cysteine synthase A; py 72.1 25 0.00086 34.9 11.2 119 329-472 82-210 (313)
158 3cpr_A Dihydrodipicolinate syn 72.0 29 0.001 34.7 11.7 98 242-343 40-148 (304)
159 2vc6_A MOSA, dihydrodipicolina 71.9 24 0.00082 35.1 10.9 98 242-343 24-132 (292)
160 2pqm_A Cysteine synthase; OASS 71.7 15 0.00052 37.3 9.6 118 329-472 93-221 (343)
161 3na8_A Putative dihydrodipicol 70.7 21 0.00071 36.1 10.3 98 242-343 48-156 (315)
162 3tak_A DHDPS, dihydrodipicolin 70.6 36 0.0012 33.7 11.9 98 242-343 25-133 (291)
163 1tdj_A Biosynthetic threonine 70.3 46 0.0016 36.1 13.4 116 329-471 94-216 (514)
164 3l5l_A Xenobiotic reductase A; 70.3 26 0.00088 36.0 11.1 127 236-380 147-325 (363)
165 3i65_A Dihydroorotate dehydrog 70.1 11 0.00037 39.9 8.3 101 235-339 278-402 (415)
166 2nzl_A Hydroxyacid oxidase 1; 70.0 20 0.0007 37.3 10.3 98 263-386 240-341 (392)
167 1o5k_A DHDPS, dihydrodipicolin 69.9 29 0.00098 34.8 11.1 98 242-343 36-144 (306)
168 3sgz_A Hydroxyacid oxidase 2; 69.7 46 0.0016 34.4 12.7 51 337-402 272-330 (352)
169 3d0c_A Dihydrodipicolinate syn 69.6 25 0.00087 35.4 10.7 102 243-348 37-150 (314)
170 3qfe_A Putative dihydrodipicol 69.1 30 0.001 34.9 11.1 99 242-343 35-145 (318)
171 2w6r_A Imidazole glycerol phos 68.9 27 0.00091 33.5 10.3 121 241-380 85-229 (266)
172 2wqp_A Polysialic acid capsule 68.7 55 0.0019 33.8 13.0 115 240-380 36-181 (349)
173 2nli_A Lactate oxidase; flavoe 68.7 35 0.0012 35.2 11.7 99 263-386 217-318 (368)
174 1p5j_A L-serine dehydratase; l 68.6 25 0.00085 36.2 10.5 117 329-471 108-233 (372)
175 3iwp_A Copper homeostasis prot 68.5 54 0.0018 33.0 12.5 137 240-400 47-207 (287)
176 3l6b_A Serine racemase; pyrido 68.5 65 0.0022 32.6 13.5 116 329-471 91-213 (346)
177 3kru_A NADH:flavin oxidoreduct 68.4 25 0.00086 36.0 10.4 128 236-380 132-307 (343)
178 3sr7_A Isopentenyl-diphosphate 68.3 26 0.00089 36.3 10.6 34 337-385 278-311 (365)
179 3qja_A IGPS, indole-3-glycerol 68.2 24 0.00081 35.0 9.9 107 241-380 73-189 (272)
180 3eeg_A 2-isopropylmalate synth 66.9 71 0.0024 32.3 13.4 140 236-386 24-175 (325)
181 2tps_A Protein (thiamin phosph 66.9 80 0.0027 29.2 14.7 105 245-380 87-200 (227)
182 4fxs_A Inosine-5'-monophosphat 66.7 8.1 0.00028 41.7 6.6 50 54-104 219-269 (496)
183 2v03_A Cysteine synthase B; py 66.5 22 0.00075 35.3 9.3 118 329-472 76-203 (303)
184 2ojp_A DHDPS, dihydrodipicolin 66.5 21 0.00071 35.5 9.1 98 242-343 25-133 (292)
185 3cgm_A SLYD, peptidyl-prolyl C 66.5 19 0.00066 32.8 8.2 62 149-210 45-114 (158)
186 3q58_A N-acetylmannosamine-6-p 66.3 29 0.001 33.3 9.9 111 238-379 34-155 (229)
187 3pc3_A CG1753, isoform A; CBS, 66.2 11 0.00039 40.4 7.7 122 329-472 128-259 (527)
188 3kws_A Putative sugar isomeras 66.0 46 0.0016 31.8 11.4 101 242-342 41-164 (287)
189 2h6r_A Triosephosphate isomera 65.8 33 0.0011 32.6 10.1 114 246-380 76-199 (219)
190 1z41_A YQJM, probable NADH-dep 65.6 83 0.0028 31.7 13.6 126 236-380 133-307 (338)
191 3igs_A N-acetylmannosamine-6-p 65.6 33 0.0011 33.0 10.1 111 238-379 34-155 (232)
192 3luf_A Two-component system re 65.5 95 0.0032 29.5 14.9 141 334-491 71-230 (259)
193 1rd5_A Tryptophan synthase alp 64.9 30 0.001 33.4 9.8 113 248-380 114-230 (262)
194 3ewb_X 2-isopropylmalate synth 64.6 1.2E+02 0.004 30.2 17.0 140 236-386 23-174 (293)
195 1zzm_A Putative deoxyribonucle 64.4 67 0.0023 30.2 12.0 101 242-345 22-135 (259)
196 2uva_G Fatty acid synthase bet 64.3 25 0.00084 44.5 11.0 122 241-380 655-795 (2060)
197 2k8i_A SLYD, peptidyl-prolyl C 64.1 19 0.00064 33.3 7.7 76 149-227 50-132 (171)
198 2v82_A 2-dehydro-3-deoxy-6-pho 64.0 34 0.0012 31.7 9.7 69 241-314 110-181 (212)
199 3tqk_A Phospho-2-dehydro-3-deo 63.9 39 0.0013 34.9 10.6 159 269-463 39-227 (346)
200 1vs1_A 3-deoxy-7-phosphoheptul 63.9 80 0.0027 31.3 12.8 112 242-379 55-178 (276)
201 4fo4_A Inosine 5'-monophosphat 63.7 11 0.00038 39.1 6.7 47 56-103 98-145 (366)
202 3vkj_A Isopentenyl-diphosphate 63.3 37 0.0013 35.2 10.5 34 337-385 267-300 (368)
203 1vzw_A Phosphoribosyl isomeras 63.3 21 0.00071 33.9 8.2 66 243-314 36-109 (244)
204 2qjg_A Putative aldolase MJ040 63.2 1.1E+02 0.0037 29.4 15.5 114 242-380 102-237 (273)
205 1o58_A O-acetylserine sulfhydr 63.1 73 0.0025 31.4 12.4 118 329-472 80-208 (303)
206 2vws_A YFAU, 2-keto-3-deoxy su 63.1 51 0.0017 32.3 11.1 95 270-388 9-105 (267)
207 1w8s_A FBP aldolase, fructose- 62.8 16 0.00055 35.9 7.4 76 238-316 157-238 (263)
208 3eoo_A Methylisocitrate lyase; 62.7 1.3E+02 0.0045 30.2 14.6 127 243-399 102-257 (298)
209 2qjg_A Putative aldolase MJ040 62.5 16 0.00054 35.4 7.3 73 237-314 163-242 (273)
210 3ivs_A Homocitrate synthase, m 62.5 1.6E+02 0.0054 31.1 15.4 137 236-386 57-204 (423)
211 4dt4_A FKBP-type 16 kDa peptid 62.4 25 0.00085 32.5 8.2 62 150-211 74-143 (169)
212 3h5d_A DHDPS, dihydrodipicolin 62.3 31 0.0011 34.7 9.6 98 242-343 31-140 (311)
213 2qr6_A IMP dehydrogenase/GMP r 62.0 10 0.00036 39.2 6.2 71 242-316 222-313 (393)
214 3exr_A RMPD (hexulose-6-phosph 61.9 1.1E+02 0.0037 29.0 13.7 112 248-380 78-196 (221)
215 1vcf_A Isopentenyl-diphosphate 61.3 41 0.0014 33.8 10.4 51 337-402 256-313 (332)
216 3kht_A Response regulator; PSI 61.3 63 0.0022 26.8 10.2 116 262-401 13-131 (144)
217 3ovp_A Ribulose-phosphate 3-ep 61.0 32 0.0011 33.1 9.0 91 242-345 20-120 (228)
218 3gr7_A NADPH dehydrogenase; fl 60.9 1E+02 0.0034 31.3 13.2 126 236-380 133-307 (340)
219 3usb_A Inosine-5'-monophosphat 60.8 16 0.00056 39.4 7.6 50 53-103 243-293 (511)
220 2aam_A Hypothetical protein TM 60.6 38 0.0013 34.3 9.9 95 244-343 127-246 (309)
221 1y0e_A Putative N-acetylmannos 60.6 95 0.0032 28.7 12.2 111 240-380 23-146 (223)
222 2cw6_A Hydroxymethylglutaryl-C 60.4 27 0.00091 34.7 8.7 140 236-386 23-180 (298)
223 3a5f_A Dihydrodipicolinate syn 60.4 27 0.00093 34.7 8.7 98 242-343 25-133 (291)
224 3o63_A Probable thiamine-phosp 60.3 1.1E+02 0.0036 29.7 12.7 101 247-380 107-219 (243)
225 2r91_A 2-keto-3-deoxy-(6-phosp 60.0 1E+02 0.0034 30.4 12.8 96 242-343 22-128 (286)
226 3eb2_A Putative dihydrodipicol 60.0 26 0.00089 35.0 8.5 98 242-343 28-136 (300)
227 2hmc_A AGR_L_411P, dihydrodipi 59.4 68 0.0023 32.8 11.7 97 243-343 51-157 (344)
228 1xi3_A Thiamine phosphate pyro 59.4 64 0.0022 29.5 10.6 101 242-380 29-135 (215)
229 2nuw_A 2-keto-3-deoxygluconate 59.4 97 0.0033 30.6 12.5 97 242-343 23-129 (288)
230 1vc4_A Indole-3-glycerol phosp 59.4 96 0.0033 30.1 12.3 112 244-380 120-236 (254)
231 2rkb_A Serine dehydratase-like 58.9 58 0.002 32.3 10.9 116 329-471 69-193 (318)
232 2kr7_A FKBP-type peptidyl-prol 58.8 25 0.00087 31.6 7.4 62 149-210 55-123 (151)
233 4h27_A L-serine dehydratase/L- 58.4 36 0.0012 34.8 9.5 117 329-471 108-233 (364)
234 3sgz_A Hydroxyacid oxidase 2; 58.3 20 0.00069 37.0 7.5 94 242-339 228-337 (352)
235 2gjl_A Hypothetical protein PA 58.2 1.2E+02 0.004 30.2 13.1 111 241-380 28-145 (328)
236 2kfw_A FKBP-type peptidyl-prol 57.7 8.6 0.00029 36.5 4.2 77 149-228 50-133 (196)
237 2d73_A Alpha-glucosidase SUSB; 57.4 92 0.0031 35.3 13.0 105 237-346 369-510 (738)
238 2gn0_A Threonine dehydratase c 57.3 1.2E+02 0.0042 30.3 13.1 116 329-471 103-225 (342)
239 2fli_A Ribulose-phosphate 3-ep 57.2 55 0.0019 30.3 9.8 88 242-344 19-116 (220)
240 2czd_A Orotidine 5'-phosphate 57.2 84 0.0029 29.1 11.1 108 242-380 68-185 (208)
241 3bo9_A Putative nitroalkan dio 57.0 1.6E+02 0.0055 29.4 14.4 110 241-380 39-151 (326)
242 1gox_A (S)-2-hydroxy-acid oxid 56.5 17 0.00059 37.4 6.6 68 242-313 236-313 (370)
243 3zwt_A Dihydroorotate dehydrog 56.3 38 0.0013 35.0 9.2 100 235-338 229-354 (367)
244 2r14_A Morphinone reductase; H 56.2 94 0.0032 32.0 12.2 121 236-380 155-328 (377)
245 4h3d_A 3-dehydroquinate dehydr 56.1 87 0.003 30.6 11.4 137 228-380 20-176 (258)
246 1w3i_A EDA, 2-keto-3-deoxy glu 56.1 1.1E+02 0.0038 30.2 12.3 97 242-343 23-129 (293)
247 1vr6_A Phospho-2-dehydro-3-deo 55.7 1.1E+02 0.0037 31.6 12.4 112 242-379 123-247 (350)
248 2xio_A Putative deoxyribonucle 55.7 34 0.0012 33.7 8.4 101 243-345 31-148 (301)
249 3vc3_A Beta-cyanoalnine syntha 55.4 63 0.0021 32.7 10.6 118 329-471 102-229 (344)
250 3g8r_A Probable spore coat pol 55.4 58 0.002 33.6 10.3 89 265-380 78-168 (350)
251 3tjx_A Dihydroorotate dehydrog 55.4 1.8E+02 0.006 29.4 14.6 70 320-404 259-329 (354)
252 3ngf_A AP endonuclease, family 55.4 89 0.0031 29.5 11.2 99 242-342 26-149 (269)
253 3lab_A Putative KDPG (2-keto-3 55.3 87 0.003 30.1 10.9 105 245-383 31-142 (217)
254 1zco_A 2-dehydro-3-deoxyphosph 55.0 43 0.0015 32.9 9.0 131 232-382 86-229 (262)
255 3o1n_A 3-dehydroquinate dehydr 54.9 1.4E+02 0.0049 29.4 12.8 136 228-380 40-196 (276)
256 1nvm_A HOA, 4-hydroxy-2-oxoval 54.8 98 0.0034 31.3 11.9 128 236-380 26-169 (345)
257 1yad_A Regulatory protein TENI 54.6 37 0.0012 31.7 8.1 67 242-314 120-197 (221)
258 1jbq_A B, cystathionine beta-s 54.6 30 0.001 36.6 8.2 119 329-472 176-307 (435)
259 1eep_A Inosine 5'-monophosphat 54.6 16 0.00055 37.9 6.1 49 55-104 142-191 (404)
260 3lmz_A Putative sugar isomeras 54.5 1E+02 0.0035 28.9 11.4 90 242-343 33-132 (257)
261 3vav_A 3-methyl-2-oxobutanoate 54.2 1.3E+02 0.0044 30.0 12.3 98 234-343 31-148 (275)
262 3khj_A Inosine-5-monophosphate 54.1 18 0.00063 37.3 6.4 45 57-104 98-143 (361)
263 3lye_A Oxaloacetate acetyl hyd 54.1 97 0.0033 31.3 11.5 100 271-399 153-265 (307)
264 1qpo_A Quinolinate acid phosph 53.9 28 0.00096 34.8 7.5 64 242-310 204-270 (284)
265 3inp_A D-ribulose-phosphate 3- 53.8 39 0.0013 33.1 8.3 110 242-379 43-162 (246)
266 4adt_A Pyridoxine biosynthetic 53.8 38 0.0013 34.1 8.4 120 243-399 32-174 (297)
267 1tqj_A Ribulose-phosphate 3-ep 53.7 1.1E+02 0.0037 29.1 11.4 111 242-379 20-140 (230)
268 1xg4_A Probable methylisocitra 53.6 1.8E+02 0.0063 29.0 14.8 129 242-399 97-253 (295)
269 2y1h_A Putative deoxyribonucle 53.6 40 0.0014 32.1 8.4 102 243-345 24-147 (272)
270 2tps_A Protein (thiamin phosph 53.6 99 0.0034 28.5 11.0 100 242-380 34-143 (227)
271 3cqj_A L-ribulose-5-phosphate 53.5 60 0.0021 31.1 9.7 101 242-342 33-165 (295)
272 4avf_A Inosine-5'-monophosphat 53.5 17 0.00057 39.1 6.1 50 54-104 217-267 (490)
273 3f2b_A DNA-directed DNA polyme 53.5 71 0.0024 37.7 11.7 122 242-373 135-350 (1041)
274 1h5y_A HISF; histidine biosynt 53.5 36 0.0012 31.7 7.9 87 242-340 157-251 (253)
275 2yr1_A 3-dehydroquinate dehydr 53.5 1.5E+02 0.0052 28.8 12.6 133 230-380 22-176 (257)
276 1p0k_A Isopentenyl-diphosphate 53.1 25 0.00087 35.5 7.2 95 242-339 192-316 (349)
277 3fa4_A 2,3-dimethylmalate lyas 52.6 1.5E+02 0.0052 29.8 12.7 98 277-399 151-257 (302)
278 4af0_A Inosine-5'-monophosphat 52.6 12 0.00042 40.9 4.9 50 54-104 269-319 (556)
279 2z6i_A Trans-2-enoyl-ACP reduc 52.5 1.3E+02 0.0046 29.9 12.5 109 241-380 25-137 (332)
280 1jcn_A Inosine monophosphate d 52.4 17 0.00057 39.0 5.9 49 55-104 244-293 (514)
281 1tzj_A ACC deaminase, 1-aminoc 52.4 59 0.002 32.4 9.7 128 329-471 84-226 (338)
282 1ve5_A Threonine deaminase; ri 52.2 1E+02 0.0034 30.3 11.3 116 329-471 80-206 (311)
283 2p10_A MLL9387 protein; putati 52.1 33 0.0011 34.5 7.5 67 303-380 184-259 (286)
284 1rd5_A Tryptophan synthase alp 52.0 87 0.003 30.1 10.6 94 239-343 32-149 (262)
285 3gka_A N-ethylmaleimide reduct 52.0 97 0.0033 31.8 11.4 114 236-380 150-316 (361)
286 1dxe_A 2-dehydro-3-deoxy-galac 52.0 58 0.002 31.6 9.3 97 269-388 9-106 (256)
287 3f4w_A Putative hexulose 6 pho 51.9 1E+02 0.0035 28.2 10.7 113 242-380 16-134 (211)
288 1p4c_A L(+)-mandelate dehydrog 51.9 1.1E+02 0.0037 31.5 11.9 35 335-384 276-310 (380)
289 1xwy_A DNAse TATD, deoxyribonu 51.5 1.4E+02 0.0049 28.0 11.9 99 243-345 23-133 (264)
290 1o94_A Tmadh, trimethylamine d 51.3 82 0.0028 35.1 11.6 131 236-380 138-321 (729)
291 3ble_A Citramalate synthase fr 51.3 1.3E+02 0.0046 30.3 12.3 117 244-379 101-244 (337)
292 8abp_A L-arabinose-binding pro 51.1 49 0.0017 31.4 8.6 64 270-344 24-89 (306)
293 3hgm_A Universal stress protei 51.0 20 0.0007 30.2 5.2 41 426-467 98-147 (147)
294 2nli_A Lactate oxidase; flavoe 50.9 21 0.00073 36.8 6.2 68 242-313 240-317 (368)
295 4dpp_A DHDPS 2, dihydrodipicol 50.8 64 0.0022 33.3 9.8 96 242-343 83-189 (360)
296 1vcv_A Probable deoxyribose-ph 50.8 21 0.00072 34.6 5.8 145 235-400 12-182 (226)
297 1izc_A Macrophomate synthase i 50.7 1E+02 0.0036 31.4 11.3 98 270-390 28-134 (339)
298 1ypf_A GMP reductase; GUAC, pu 50.6 52 0.0018 33.3 9.0 69 242-314 160-244 (336)
299 1ub3_A Aldolase protein; schif 50.6 29 0.001 33.4 6.8 144 235-396 14-173 (220)
300 2nzl_A Hydroxyacid oxidase 1; 50.2 23 0.00079 37.0 6.4 94 242-339 263-372 (392)
301 1pii_A N-(5'phosphoribosyl)ant 49.7 21 0.00073 38.1 6.1 119 233-379 157-281 (452)
302 3m47_A Orotidine 5'-phosphate 49.1 39 0.0013 32.4 7.4 50 244-293 83-132 (228)
303 2z08_A Universal stress protei 49.1 32 0.0011 28.9 6.2 41 426-467 87-136 (137)
304 1ep3_A Dihydroorotate dehydrog 48.7 30 0.001 34.0 6.7 89 243-339 180-297 (311)
305 3tva_A Xylose isomerase domain 48.7 1.2E+02 0.0042 28.7 11.1 99 244-342 26-157 (290)
306 3ijd_A Uncharacterized protein 48.6 47 0.0016 33.8 8.2 99 239-342 165-279 (315)
307 1vli_A Spore coat polysacchari 48.4 1.2E+02 0.0042 31.6 11.5 113 240-379 45-191 (385)
308 3tsm_A IGPS, indole-3-glycerol 48.4 98 0.0033 30.7 10.4 107 241-380 80-196 (272)
309 2q02_A Putative cytoplasmic pr 48.4 1.7E+02 0.0059 27.2 13.1 100 242-342 22-138 (272)
310 2nv1_A Pyridoxal biosynthesis 48.2 49 0.0017 32.8 8.2 119 243-394 32-169 (305)
311 1gox_A (S)-2-hydroxy-acid oxid 48.2 1.5E+02 0.005 30.4 12.1 33 337-384 280-312 (370)
312 3m5v_A DHDPS, dihydrodipicolin 47.9 71 0.0024 31.8 9.4 86 303-401 42-135 (301)
313 1v71_A Serine racemase, hypoth 47.6 1.6E+02 0.0054 29.1 12.0 116 329-471 89-211 (323)
314 3tnj_A Universal stress protei 47.4 28 0.00095 29.6 5.6 44 426-470 97-148 (150)
315 3cwo_X Beta/alpha-barrel prote 47.4 1.4E+02 0.0049 26.8 10.9 116 242-380 65-203 (237)
316 2jpp_A Translational repressor 47.2 28 0.00094 27.9 4.9 29 185-213 6-34 (70)
317 1p1x_A Deoxyribose-phosphate a 47.0 71 0.0024 31.5 9.0 150 235-399 23-193 (260)
318 4d9b_A D-cysteine desulfhydras 46.7 86 0.0029 31.5 9.9 163 281-471 47-236 (342)
319 3ctl_A D-allulose-6-phosphate 46.5 83 0.0028 30.2 9.3 107 243-379 17-134 (231)
320 1ka9_F Imidazole glycerol phos 46.3 52 0.0018 31.1 7.8 87 242-340 155-249 (252)
321 4d9i_A Diaminopropionate ammon 46.2 63 0.0022 33.3 9.0 122 328-471 126-262 (398)
322 2bti_A Carbon storage regulato 45.7 31 0.0011 27.1 4.9 29 185-213 8-36 (63)
323 1mjh_A Protein (ATP-binding do 45.7 42 0.0014 28.9 6.5 44 426-470 108-160 (162)
324 1f2d_A 1-aminocyclopropane-1-c 45.4 57 0.0019 32.7 8.3 125 329-471 84-229 (341)
325 3h75_A Periplasmic sugar-bindi 45.3 2E+02 0.0068 27.9 12.2 68 268-346 24-95 (350)
326 3rcm_A TATD family hydrolase; 45.2 1.6E+02 0.0055 29.0 11.5 101 242-345 20-135 (287)
327 3dx5_A Uncharacterized protein 44.7 1.4E+02 0.0048 28.2 10.7 101 242-342 18-141 (286)
328 1j6o_A TATD-related deoxyribon 44.6 50 0.0017 31.6 7.5 109 232-345 20-141 (268)
329 3l5a_A NADH/flavin oxidoreduct 44.6 1.6E+02 0.0055 30.8 11.9 127 235-380 158-346 (419)
330 3h8v_A Ubiquitin-like modifier 44.5 53 0.0018 32.9 7.8 68 266-343 90-168 (292)
331 3ipw_A Hydrolase TATD family p 44.5 56 0.0019 33.2 8.1 106 239-345 51-176 (325)
332 4ab4_A Xenobiotic reductase B; 44.4 2.4E+02 0.0081 28.9 12.9 117 236-380 142-308 (362)
333 1qo2_A Molecule: N-((5-phospho 44.2 1E+02 0.0035 29.0 9.6 117 241-380 84-223 (241)
334 3iau_A Threonine deaminase; py 44.0 2.6E+02 0.0087 28.3 13.1 117 329-472 123-246 (366)
335 3nbm_A PTS system, lactose-spe 43.9 12 0.00041 32.1 2.5 62 266-342 22-83 (108)
336 1jw9_B Molybdopterin biosynthe 43.8 62 0.0021 31.1 8.0 67 266-343 86-152 (249)
337 1nvm_A HOA, 4-hydroxy-2-oxoval 43.8 1.9E+02 0.0065 29.1 12.0 117 242-377 96-223 (345)
338 3cwc_A Putative glycerate kina 43.7 62 0.0021 33.9 8.3 61 282-345 267-327 (383)
339 1ydn_A Hydroxymethylglutaryl-C 43.7 1.6E+02 0.0054 28.9 11.1 119 242-379 82-230 (295)
340 1i60_A IOLI protein; beta barr 43.6 1.9E+02 0.0066 26.8 11.4 101 242-342 17-141 (278)
341 3qc0_A Sugar isomerase; TIM ba 43.3 49 0.0017 31.1 7.1 101 242-342 21-141 (275)
342 3p6l_A Sugar phosphate isomera 43.2 2.1E+02 0.0071 26.6 11.6 89 242-342 25-133 (262)
343 3vnd_A TSA, tryptophan synthas 43.1 1.2E+02 0.004 29.9 10.0 91 241-341 34-152 (267)
344 3iwp_A Copper homeostasis prot 42.9 2.7E+02 0.0093 27.9 13.7 118 242-380 114-238 (287)
345 2htm_A Thiazole biosynthesis p 42.5 1.5E+02 0.0052 29.4 10.6 80 303-402 146-230 (268)
346 3glc_A Aldolase LSRF; TIM barr 42.5 37 0.0013 34.2 6.2 68 244-318 194-266 (295)
347 1f76_A Dihydroorotate dehydrog 42.0 57 0.0019 32.6 7.7 72 237-313 222-322 (336)
348 1zud_1 Adenylyltransferase THI 42.0 74 0.0025 30.6 8.2 67 266-343 83-149 (251)
349 3dz1_A Dihydrodipicolinate syn 41.9 1.5E+02 0.0052 29.5 10.8 83 303-400 43-132 (313)
350 2b7n_A Probable nicotinate-nuc 41.6 41 0.0014 33.3 6.4 64 242-310 192-258 (273)
351 1vpz_A Carbon storage regulato 41.6 37 0.0013 27.4 4.9 33 181-213 14-46 (73)
352 1nsj_A PRAI, phosphoribosyl an 41.6 1.7E+02 0.0057 27.6 10.4 111 241-380 11-126 (205)
353 1vhk_A Hypothetical protein YQ 41.5 1.7E+02 0.0058 28.7 10.9 121 183-309 35-175 (268)
354 1o4u_A Type II quinolic acid p 41.4 30 0.001 34.6 5.4 65 241-310 202-269 (285)
355 1jub_A Dihydroorotate dehydrog 41.4 88 0.003 30.7 8.9 97 238-338 170-298 (311)
356 4dbe_A Orotidine 5'-phosphate 41.3 40 0.0014 32.3 6.1 87 242-334 125-212 (222)
357 3pr9_A FKBP-type peptidyl-prol 41.3 31 0.0011 31.4 5.0 62 149-211 62-128 (157)
358 1wkv_A Cysteine synthase; homo 41.2 51 0.0017 34.2 7.3 118 329-471 160-289 (389)
359 3dzv_A 4-methyl-5-(beta-hydrox 40.9 44 0.0015 33.2 6.5 46 292-342 48-93 (273)
360 3fdx_A Putative filament prote 40.6 46 0.0016 27.9 5.8 42 425-467 93-142 (143)
361 1wa3_A 2-keto-3-deoxy-6-phosph 40.4 2.1E+02 0.0072 25.9 13.5 104 242-380 73-178 (205)
362 3s3t_A Nucleotide-binding prot 40.3 43 0.0015 28.1 5.6 42 425-467 94-145 (146)
363 1y8q_A Ubiquitin-like 1 activa 40.3 66 0.0023 32.7 7.9 66 266-343 91-156 (346)
364 2nx9_A Oxaloacetate decarboxyl 40.3 3.2E+02 0.011 29.1 13.5 122 242-379 103-232 (464)
365 2dum_A Hypothetical protein PH 40.1 53 0.0018 28.5 6.4 46 425-471 104-158 (170)
366 3sz8_A 2-dehydro-3-deoxyphosph 40.1 2.2E+02 0.0076 28.4 11.5 105 250-380 49-168 (285)
367 3k30_A Histamine dehydrogenase 40.0 45 0.0016 36.8 7.1 131 236-380 145-324 (690)
368 1tv5_A Dhodehase, dihydroorota 40.0 92 0.0031 33.0 9.2 99 236-338 307-429 (443)
369 2wkj_A N-acetylneuraminate lya 39.8 1.5E+02 0.0051 29.4 10.3 84 303-400 46-137 (303)
370 3o07_A Pyridoxine biosynthesis 39.6 2.1E+02 0.0072 28.8 11.1 41 361-402 123-167 (291)
371 2zbt_A Pyridoxal biosynthesis 39.6 80 0.0027 30.9 8.2 120 242-396 31-171 (297)
372 1tq8_A Hypothetical protein RV 39.6 47 0.0016 29.2 5.9 44 426-470 107-159 (163)
373 3loq_A Universal stress protei 39.5 1.1E+02 0.0036 29.3 9.0 82 433-530 118-208 (294)
374 2ehh_A DHDPS, dihydrodipicolin 39.2 1.3E+02 0.0045 29.6 9.8 84 303-400 35-126 (294)
375 3a24_A Alpha-galactosidase; gl 39.1 2E+02 0.007 32.0 12.0 103 238-346 308-427 (641)
376 1icp_A OPR1, 12-oxophytodienoa 39.0 1.7E+02 0.0057 30.1 10.8 32 334-380 298-330 (376)
377 1x1o_A Nicotinate-nucleotide p 39.0 50 0.0017 33.0 6.6 65 240-310 204-269 (286)
378 1thf_D HISF protein; thermophI 39.0 75 0.0026 30.0 7.6 88 242-341 154-249 (253)
379 1n7k_A Deoxyribose-phosphate a 38.9 2.3E+02 0.0077 27.4 11.1 140 235-396 31-191 (234)
380 2r8w_A AGR_C_1641P; APC7498, d 38.9 1.4E+02 0.0049 30.1 10.1 84 303-400 69-160 (332)
381 3cny_A Inositol catabolism pro 38.9 1.2E+02 0.0041 28.8 9.2 98 242-342 34-159 (301)
382 3qtp_A Enolase 1; glycolysis, 38.9 3.4E+02 0.012 28.8 13.2 142 237-400 279-424 (441)
383 3oa3_A Aldolase; structural ge 38.7 64 0.0022 32.4 7.3 146 235-398 69-230 (288)
384 2dpr_A CON-T(K7GLA); conantoxi 38.7 22 0.00074 22.5 2.3 16 91-107 3-18 (26)
385 2ftp_A Hydroxymethylglutaryl-C 38.6 2.5E+02 0.0085 27.7 11.7 119 241-379 85-234 (302)
386 1k77_A EC1530, hypothetical pr 38.6 2E+02 0.0069 26.5 10.6 99 243-342 19-142 (260)
387 3fs2_A 2-dehydro-3-deoxyphosph 38.6 2.2E+02 0.0074 28.7 11.2 105 250-380 70-189 (298)
388 3dlo_A Universal stress protei 38.2 49 0.0017 28.8 5.7 41 426-467 105-154 (155)
389 1v8a_A Hydroxyethylthiazole ki 38.1 36 0.0012 33.2 5.3 46 292-342 46-91 (265)
390 1i4n_A Indole-3-glycerol phosp 37.8 2.9E+02 0.01 26.8 12.0 115 245-386 116-234 (251)
391 3vzx_A Heptaprenylglyceryl pho 37.7 46 0.0016 32.3 5.9 59 294-379 22-81 (228)
392 2qul_A D-tagatose 3-epimerase; 37.7 1.7E+02 0.0057 27.6 10.0 101 242-342 20-151 (290)
393 2zbt_A Pyridoxal biosynthesis 37.7 91 0.0031 30.5 8.3 62 242-309 90-152 (297)
394 3ceu_A Thiamine phosphate pyro 37.3 1E+02 0.0035 28.6 8.2 96 242-380 16-114 (210)
395 1vhn_A Putative flavin oxidore 37.2 1.1E+02 0.0038 30.4 8.9 119 240-380 72-213 (318)
396 1f6k_A N-acetylneuraminate lya 37.1 1.5E+02 0.0052 29.2 9.8 90 297-400 31-130 (293)
397 1o66_A 3-methyl-2-oxobutanoate 37.1 3.2E+02 0.011 27.1 12.7 95 236-342 21-136 (275)
398 1kbi_A Cytochrome B2, L-LCR; f 37.0 53 0.0018 35.4 6.9 94 242-339 354-468 (511)
399 1ivn_A Thioesterase I; hydrola 37.0 82 0.0028 27.7 7.2 54 292-345 50-107 (190)
400 1i8d_A Riboflavin synthase; ri 36.8 76 0.0026 30.5 7.2 56 173-229 23-86 (213)
401 3noy_A 4-hydroxy-3-methylbut-2 36.7 1.8E+02 0.0062 30.1 10.4 89 241-343 48-139 (366)
402 3ngj_A Deoxyribose-phosphate a 36.6 79 0.0027 30.9 7.4 144 235-396 38-197 (239)
403 2yxg_A DHDPS, dihydrodipicolin 36.4 1.6E+02 0.0055 28.9 9.9 84 303-400 35-126 (289)
404 1ps9_A 2,4-dienoyl-COA reducta 36.2 1.5E+02 0.0052 32.4 10.6 32 335-380 278-310 (671)
405 1i4n_A Indole-3-glycerol phosp 36.2 1.7E+02 0.0059 28.5 9.9 110 241-380 62-178 (251)
406 1pii_A N-(5'phosphoribosyl)ant 36.0 3.2E+02 0.011 29.0 12.6 110 241-380 69-184 (452)
407 2rfg_A Dihydrodipicolinate syn 35.7 1.4E+02 0.005 29.4 9.4 84 303-400 35-126 (297)
408 3h5i_A Response regulator/sens 35.6 1.6E+02 0.0054 24.2 8.5 72 437-513 49-127 (140)
409 2g0w_A LMO2234 protein; putati 35.5 2.1E+02 0.0071 27.4 10.4 41 242-282 39-85 (296)
410 3tml_A 2-dehydro-3-deoxyphosph 35.3 2.8E+02 0.0097 27.6 11.4 100 249-374 45-159 (288)
411 3tb6_A Arabinose metabolism tr 35.2 2.7E+02 0.0094 25.7 11.9 84 255-345 19-107 (298)
412 3tfx_A Orotidine 5'-phosphate 35.2 99 0.0034 30.4 7.9 76 243-326 148-233 (259)
413 3pm6_A Putative fructose-bisph 35.2 3.5E+02 0.012 27.3 12.1 124 235-400 8-141 (306)
414 2yw3_A 4-hydroxy-2-oxoglutarat 35.1 2.6E+02 0.0088 26.0 10.6 101 242-380 73-179 (207)
415 2yzr_A Pyridoxal biosynthesis 34.9 3.8E+02 0.013 27.3 12.7 38 364-402 132-173 (330)
416 1jmv_A USPA, universal stress 34.9 58 0.002 27.2 5.6 44 426-470 90-139 (141)
417 3kw2_A Probable R-RNA methyltr 34.8 99 0.0034 30.3 7.9 72 184-258 32-109 (257)
418 3hpd_A Hydroxyethylthiazole ki 34.7 59 0.002 32.2 6.2 46 292-342 46-91 (265)
419 3r12_A Deoxyribose-phosphate a 34.6 1.7E+02 0.006 28.8 9.6 142 235-396 54-213 (260)
420 3elf_A Fructose-bisphosphate a 34.5 3.1E+02 0.01 28.2 11.7 144 234-400 1-152 (349)
421 3bdk_A D-mannonate dehydratase 34.4 35 0.0012 35.6 4.8 88 239-345 30-125 (386)
422 1to3_A Putative aldolase YIHT; 34.3 69 0.0023 32.1 6.8 72 244-315 182-260 (304)
423 1tjy_A Sugar transport protein 34.3 67 0.0023 31.1 6.6 42 294-345 51-93 (316)
424 4a3u_A NCR, NADH\:flavin oxido 34.2 1.2E+02 0.0042 30.8 8.8 23 236-258 141-171 (358)
425 4e8b_A Ribosomal RNA small sub 34.2 1.2E+02 0.004 29.5 8.3 72 183-258 32-109 (251)
426 1kzl_A Riboflavin synthase; bi 34.1 59 0.002 31.1 5.9 56 173-229 24-86 (208)
427 3jy6_A Transcriptional regulat 34.1 1.9E+02 0.0065 26.8 9.7 65 268-345 27-93 (276)
428 1ea0_A Glutamate synthase [NAD 34.0 2.2E+02 0.0075 34.9 11.9 118 248-380 958-1093(1479)
429 2gm3_A Unknown protein; AT3G01 34.0 66 0.0022 28.2 6.0 45 426-471 112-165 (175)
430 3qze_A DHDPS, dihydrodipicolin 34.0 1.7E+02 0.0058 29.3 9.7 85 303-401 58-150 (314)
431 3ks6_A Glycerophosphoryl diest 33.9 1.1E+02 0.0039 29.1 8.1 39 327-380 194-232 (250)
432 1mdl_A Mandelate racemase; iso 33.8 70 0.0024 32.2 6.9 56 280-343 240-297 (359)
433 3otr_A Enolase; structural gen 33.7 3.2E+02 0.011 29.1 12.0 143 237-400 281-427 (452)
434 2v9d_A YAGE; dihydrodipicolini 33.7 1.4E+02 0.0048 30.3 9.1 84 303-400 66-157 (343)
435 3flu_A DHDPS, dihydrodipicolin 33.6 2E+02 0.0067 28.4 10.0 84 303-400 42-133 (297)
436 1xky_A Dihydrodipicolinate syn 33.5 1.6E+02 0.0056 29.1 9.4 84 303-400 47-138 (301)
437 3u0h_A Xylose isomerase domain 33.5 49 0.0017 31.2 5.4 101 242-342 19-140 (281)
438 3ffs_A Inosine-5-monophosphate 33.3 36 0.0012 35.7 4.7 42 59-103 139-181 (400)
439 3cpr_A Dihydrodipicolinate syn 33.3 1.8E+02 0.0063 28.8 9.8 84 303-400 51-142 (304)
440 1ofd_A Ferredoxin-dependent gl 33.1 2.6E+02 0.009 34.3 12.4 118 248-380 993-1128(1520)
441 1yxy_A Putative N-acetylmannos 33.0 2.7E+02 0.0092 25.8 10.5 112 235-377 29-157 (234)
442 3fst_A 5,10-methylenetetrahydr 33.0 63 0.0021 32.6 6.2 72 227-299 152-223 (304)
443 4adt_A Pyridoxine biosynthetic 32.8 96 0.0033 31.1 7.5 59 242-309 90-152 (297)
444 2ojp_A DHDPS, dihydrodipicolin 32.8 1.3E+02 0.0043 29.7 8.4 88 299-400 31-127 (292)
445 1vc4_A Indole-3-glycerol phosp 32.7 2.2E+02 0.0074 27.6 9.9 102 245-380 71-181 (254)
446 3fg9_A Protein of universal st 32.6 46 0.0016 28.5 4.6 42 425-467 105-155 (156)
447 1wv2_A Thiazole moeity, thiazo 32.6 3.8E+02 0.013 26.5 16.1 150 227-402 77-239 (265)
448 1s2w_A Phosphoenolpyruvate pho 32.3 3.9E+02 0.013 26.6 16.5 130 242-399 97-256 (295)
449 3heb_A Response regulator rece 32.3 2.2E+02 0.0074 23.6 10.3 113 262-395 12-132 (152)
450 3prb_A FKBP-type peptidyl-prol 32.3 65 0.0022 31.3 5.9 62 149-211 62-128 (231)
451 3ss7_X D-serine dehydratase; t 32.0 1.1E+02 0.0038 32.1 8.2 118 328-471 174-308 (442)
452 3ddy_A Lumazine protein, LUMP; 31.9 1E+02 0.0035 29.0 7.0 57 171-228 21-84 (186)
453 4djd_D C/Fe-SP, corrinoid/iron 31.9 1.8E+02 0.006 29.6 9.4 139 239-390 141-311 (323)
454 3apt_A Methylenetetrahydrofola 31.9 54 0.0018 33.0 5.5 62 239-300 160-221 (310)
455 3l49_A ABC sugar (ribose) tran 31.7 2.4E+02 0.0083 26.1 10.0 68 268-345 25-94 (291)
456 1q77_A Hypothetical protein AQ 31.6 40 0.0014 28.2 3.9 41 426-467 97-137 (138)
457 3nhm_A Response regulator; pro 31.6 2E+02 0.0068 23.0 10.0 61 430-490 39-106 (133)
458 3rot_A ABC sugar transporter, 31.6 1E+02 0.0036 29.1 7.4 42 294-345 52-94 (297)
459 2nv1_A Pyridoxal biosynthesis 31.6 1.2E+02 0.004 30.0 7.9 119 242-380 90-238 (305)
460 2pgw_A Muconate cycloisomerase 31.4 1.4E+02 0.0048 30.4 8.7 95 238-344 202-299 (384)
461 2ovl_A Putative racemase; stru 31.4 1.6E+02 0.0055 29.8 9.1 94 238-343 203-299 (371)
462 1vrd_A Inosine-5'-monophosphat 31.3 57 0.002 34.6 5.9 47 57-104 228-275 (494)
463 1gvf_A Tagatose-bisphosphate a 31.1 3.1E+02 0.01 27.3 10.9 119 242-402 7-127 (286)
464 3guw_A Uncharacterized protein 31.1 39 0.0013 33.0 4.2 99 243-345 15-131 (261)
465 3gg7_A Uncharacterized metallo 30.8 1.2E+02 0.004 29.5 7.6 94 243-345 18-126 (254)
466 3r2g_A Inosine 5'-monophosphat 30.7 38 0.0013 35.1 4.2 47 57-104 91-138 (361)
467 1at0_A 17-hedgehog; developmen 30.7 1.4E+02 0.005 26.2 7.6 62 149-219 58-134 (145)
468 3gbv_A Putative LACI-family tr 30.6 1.8E+02 0.0063 27.1 8.9 69 267-345 28-102 (304)
469 1o5k_A DHDPS, dihydrodipicolin 30.5 1.5E+02 0.0051 29.5 8.6 84 303-400 47-138 (306)
470 2p10_A MLL9387 protein; putati 30.5 2.5E+02 0.0084 28.2 9.9 118 246-382 42-192 (286)
471 2gwg_A 4-oxalomesaconate hydra 30.5 4E+02 0.014 26.1 12.4 98 243-344 53-179 (350)
472 3fij_A LIN1909 protein; 11172J 30.4 1.4E+02 0.0046 28.7 8.0 48 296-343 55-114 (254)
473 2ioy_A Periplasmic sugar-bindi 30.4 2E+02 0.007 26.8 9.2 80 256-345 6-90 (283)
474 2zds_A Putative DNA-binding pr 30.1 2.1E+02 0.0071 27.6 9.5 101 242-342 18-178 (340)
475 3uug_A Multiple sugar-binding 30.1 2.2E+02 0.0075 27.1 9.5 42 294-345 50-92 (330)
476 3mil_A Isoamyl acetate-hydroly 30.1 86 0.003 28.3 6.3 56 290-345 57-121 (240)
477 3ve9_A Orotidine-5'-phosphate 30.1 47 0.0016 31.7 4.5 81 242-329 118-200 (215)
478 3g1w_A Sugar ABC transporter; 30.0 1.2E+02 0.0042 28.5 7.6 42 294-345 52-94 (305)
479 3aam_A Endonuclease IV, endoiv 29.9 2.2E+02 0.0075 26.6 9.4 96 242-342 17-138 (270)
480 3i42_A Response regulator rece 29.9 1.6E+02 0.0054 23.5 7.3 62 430-491 39-107 (127)
481 1vcf_A Isopentenyl-diphosphate 29.9 1.2E+02 0.0041 30.3 7.8 95 242-339 195-320 (332)
482 3b0p_A TRNA-dihydrouridine syn 29.7 73 0.0025 32.4 6.2 69 242-314 147-230 (350)
483 3pfn_A NAD kinase; structural 29.7 24 0.00083 36.6 2.6 35 436-470 244-282 (365)
484 3ry7_A Ribokinase; transferase 29.5 3.7E+02 0.013 25.5 11.5 110 246-380 48-186 (304)
485 2ovl_A Putative racemase; stru 29.5 67 0.0023 32.6 5.9 62 54-125 133-199 (371)
486 2e6z_A Transcription elongatio 29.5 45 0.0015 25.3 3.4 44 185-231 8-55 (59)
487 1k66_A Phytochrome response re 29.5 2.3E+02 0.0078 23.0 8.6 114 262-396 14-136 (149)
488 3ceu_A Thiamine phosphate pyro 29.3 88 0.003 29.1 6.2 71 241-314 97-177 (210)
489 1k68_A Phytochrome response re 29.3 2.2E+02 0.0075 22.7 10.0 111 262-395 10-128 (140)
490 3a5f_A Dihydrodipicolinate syn 29.3 1.9E+02 0.0066 28.3 9.1 82 303-398 36-125 (291)
491 3l21_A DHDPS, dihydrodipicolin 29.2 1.7E+02 0.0058 29.1 8.7 84 303-400 50-141 (304)
492 2rdx_A Mandelate racemase/muco 28.9 1.5E+02 0.0053 30.0 8.5 92 238-344 201-295 (379)
493 3daq_A DHDPS, dihydrodipicolin 28.8 2.9E+02 0.01 27.1 10.3 85 303-401 37-129 (292)
494 1qo2_A Molecule: N-((5-phospho 28.8 1E+02 0.0036 28.9 6.8 76 243-323 148-237 (241)
495 2cw6_A Hydroxymethylglutaryl-C 28.7 4.2E+02 0.014 25.9 13.1 119 241-378 82-230 (298)
496 3kts_A Glycerol uptake operon 28.7 1.1E+02 0.0036 29.0 6.6 139 281-467 10-156 (192)
497 1nu5_A Chloromuconate cycloiso 28.7 98 0.0033 31.3 6.9 60 280-348 239-300 (370)
498 1vhc_A Putative KHG/KDPG aldol 28.7 1.1E+02 0.0037 29.3 6.8 101 242-380 79-186 (224)
499 2vc6_A MOSA, dihydrodipicolina 28.7 1.5E+02 0.0053 29.1 8.2 84 303-400 35-126 (292)
500 1xg4_A Probable methylisocitra 28.4 1E+02 0.0034 30.9 6.8 68 240-312 168-238 (295)
No 1
>3gr4_A Pyruvate kinase isozymes M1/M2; activator, acetylation, allosteric enzyme, alternative splicing, glycolysis, magnesium, metal-binding; HET: FBP TLA DYY ADP; 1.60A {Homo sapiens} PDB: 3gqy_A* 3h6o_A* 3me3_A* 3srh_A 3srd_A 1zjh_A 4b2d_A* 4b2d_D* 3u2z_A* 3g2g_A 1t5a_A* 3bjt_A 4g1n_A* 3bjf_A* 3srf_C 1f3x_A 3n25_A 1f3w_A 1a49_A* 1a5u_A* ...
Probab=100.00 E-value=3e-139 Score=1134.45 Aligned_cols=519 Identities=34% Similarity=0.546 Sum_probs=487.3
Q ss_pred eeeCCCCC-----CCCCCCccccchhhhhhhHHHhhhhcCCCCCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEee
Q psy6272 10 VVLLPWRK-----PDPLAPPVNQVNAAFADRYLNHLEQLNLDSPVRGVNLTNIMATVGENNNSVDLIKLMLRSGVNILRI 84 (547)
Q Consensus 10 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~h~~~l~i~~~~~~~r~tkIi~TiGpas~~~e~l~~li~aGm~v~Ri 84 (547)
.|-+||++ ....|.+.||+.+++|+|+|+|+|.|+++++|..+|+|||||||||||+++|+|++|+++|||||||
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~rkTKIV~TiGPas~~~e~l~~Li~aGmnv~Rl 93 (550)
T 3gr4_A 14 LVPRGSMSKPHSEAGTAFIQTQQLHAAMADTFLEHMCRLDIDSPPITARNTGIICTIGPASRSVETLKEMIKSGMNVARL 93 (550)
T ss_dssp ------------------CCSTTHHHHTCSSHHHHHHTCCTTSCCCSCCCSEEEEECSTTTCSHHHHHHHHHHTCCEEEE
T ss_pred cccccccccccccccccccchhhhcccccccHHHHhhccCCCCCCccCCCceEEEeeCCCCCCHHHHHHHHHcCCCEEEE
Confidence 34455654 3568999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c-cCCCHHHHHHHHHHHHHHHHHHhccccccceeeEEEEecCCCeeeeeccCCCCccCCCCCcccEEEecCCEEEEeecc
Q psy6272 85 P-THSSKLYQVEKILKNVKLAIEEVSLEECKVVTCAVAIETKGTQLRTGKLSRPSNVGHGDNSYSVEIAQGANIVLTANQ 163 (547)
Q Consensus 85 N-sHg~~e~~~~~~i~~ir~a~~~~~~~~~~~~~i~I~~Dl~GpkiRtG~l~~p~~~~~~~~~~~i~L~~G~~v~lt~~~ 163 (547)
| |||++|+|.+ +|+++|+++++++.+.++++|++|++||+|||||||.+. ++...+++|++||+|+||++.
T Consensus 94 NfSHG~~e~h~~-~i~~iR~a~~~~~~~~~~~~~vaIllDlkGPkIR~G~~~-------~~~~~~v~L~~G~~~~lt~~~ 165 (550)
T 3gr4_A 94 NFSHGTHEYHAE-TIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIK-------GSGTAEVELKKGATLKITLDN 165 (550)
T ss_dssp ETTSSCHHHHHH-HHHHHHHHHHTTTTCTTTCCCCEEEEECCCSCCBBCCBT-------TBTTCCEEECTTCEEEEECCG
T ss_pred ECCCCCHHHHHH-HHHHHHHHHHhhccccccCceEEEEEeCCCCEEEEEecC-------CCCCCCeEEcCCCEEEEEeCC
Confidence 9 9999999999 999999999997777667899999999999999999997 433347999999999999998
Q ss_pred ccccCCCccEEEecCCCcccccCCCCEEEEec-eeEEEEEEEeCCeEEEEEEeCcEeCCCceeeeCCCCcCCCCCChhhH
Q psy6272 164 LIETKGTVKRLFVDSMELPKRVIPDDIVYIDR-NIKLKVVEKENNDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDK 242 (547)
Q Consensus 164 ~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idD-~I~l~V~~v~~~~v~~~V~~gG~L~s~Kginlp~~~~~lp~lt~~D~ 242 (547)
.+...|+.+.|+|||++|+++|++||+||||| +|.|+|.+++++.+.|+|++||.|+++||||+||+.+++|+||++|+
T Consensus 166 ~~~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~v~~~V~~gG~L~s~KgvNlPg~~l~lpalTekD~ 245 (550)
T 3gr4_A 166 AYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKGADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDI 245 (550)
T ss_dssp GGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEECSSEEEEEEEECEEECSSCBEECTTSCCCCCSSCHHHH
T ss_pred cccCCCCccEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEeCCEEEEEEEeCcEEcCCceeecCCCccCCCCCCHHHH
Confidence 77677899999999999999999999999999 99999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccccCChHHH
Q psy6272 243 HVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVT 322 (547)
Q Consensus 243 ~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg~e~~~e~v 322 (547)
+||+|++++|+|+|++|||++++|++++|++|++.|.++.|||||||++|++|||||++++|||||||||||+|+|+++|
T Consensus 246 ~dl~f~~~~~vD~ia~SfVr~a~Dv~~~r~~L~~~g~~i~IIAKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~v 325 (550)
T 3gr4_A 246 QDLKFGVEQDVDMVFASFIRKASDVHEVRKVLGEKGKNIKIISKIENHEGVRRFDEILEASDGIMVARGDLGIEIPAEKV 325 (550)
T ss_dssp HHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHTTTTTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGH
T ss_pred HHHHHHHHcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEEEEeCCHHHHHHHHHHHHhCCEEEEccchhcccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCcEEEEcCCCC------CCCcccccccCccchhhHHHHHHhCccEEeeCCcchHH-----HHHHH
Q psy6272 323 FLAQKMIAARCNKQGKPFLVVGDILP------DHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAH-----HRVDI 391 (547)
Q Consensus 323 ~~~qk~ii~~c~~~gKPvi~aTq~Le------~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~-----eaV~~ 391 (547)
+.+||+|+++||++|||||+|||||| +|||||+ +||||||+||+||+||| ||||. |||++
T Consensus 326 p~~Qk~iI~~c~~agkpVi~ATQMLeSMi~~p~PTRAEv--------sDVanAvldG~DavMLS-gETA~G~yPveaV~~ 396 (550)
T 3gr4_A 326 FLAQKMMIGRCNRAGKPVICATQMLESMIKKPRPTRAEG--------SDVANAVLDGADCIMLS-GETAKGDYPLEAVRM 396 (550)
T ss_dssp HHHHHHHHHHHHHHTCCEEEESSTTGGGGTCSSCCHHHH--------HHHHHHHHHTCSEEEES-HHHHTCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEehhhHHhhcCCCccHHHH--------HHHHHHHHcCCcEEEEe-cCccCCCCHHHHHHH
Confidence 99999999999999999999999999 9999999 99999999999999999 99998 99999
Q ss_pred HHHHHHHhhhhhhhHHHHHHhhhcCCCCCChhhHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCCCCCEEEEeCch
Q psy6272 392 LKEILKKTESVLWEKQVFEDLCALACPPLDPAHSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLG 471 (547)
Q Consensus 392 m~~I~~~aE~~~~~~~~f~~~~~~~~~~~~~~~~ia~aav~~a~~~~a~aIvv~T~sG~tA~~isk~RP~~pIiavt~~~ 471 (547)
|++||+++|++.+|+++|..+....+.+.+..++||.+|+++|++++|+|||+||.||+||+++|||||+|||||+|+++
T Consensus 397 M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~SG~TA~~iSr~RP~~PIia~T~~~ 476 (550)
T 3gr4_A 397 QHLIAREAEAAIYHLQLFEELRRLAPITSDPTEATAVGAVEASFKCCSGAIIVLTKSGRSAHQVARYRPRAPIIAVTRNP 476 (550)
T ss_dssp HHHHHHHHHHTSCHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHTTCSCEEEECSSSHHHHHHHTTCCSSCEEEEESCH
T ss_pred HHHHHHHHhhcchhHHHHHhhhhccCCCCChHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhhCCCCCEEEEcCCH
Confidence 99999999999988888877655455667899999999999999999999999999999999999999999999999999
Q ss_pred hccccccccccceEEeecCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCeEEEEecccCCCCCCcEEEEEEee
Q psy6272 472 YVCRHLNVYRNIRPLHYIRNPQADWSMDVDCRVQFAIQHGMEIGIISPGDPLVLINGWRKGAGFTNIMRVVYAP 545 (547)
Q Consensus 472 ~~ar~l~l~~GV~p~~~~~~~~~~~~~d~d~~I~~a~~~~k~~g~~~~Gd~vvvv~g~~~g~g~tntirv~~v~ 545 (547)
+++|||+|+|||+|+++.....++|.++.|.++++|+++++++|++++||.||+++||+.|+|+||+|||++||
T Consensus 477 ~~aR~l~L~~GV~P~~~~~~~~~~~~~~~d~~~~~a~~~~~~~g~~~~GD~vVv~~G~~~g~G~TN~lrv~~v~ 550 (550)
T 3gr4_A 477 QTARQAHLYRGIFPVLCKDPVQEAWAEDVDLRVNFAMNVGKARGFFKKGDVVIVLTGWRPGSGFTNTMRVVPVP 550 (550)
T ss_dssp HHHHHGGGSTTEEEEECCSCCCSSHHHHHHHHHHHHHHHHHHTTSCCTTCEEEEEEESSSSTTCEEEEEEEECC
T ss_pred HHHHHHhccCCeEEEEecccccccccCCHHHHHHHHHHHHHHcCCCCCcCEEEEEeCCCCCCCCCeEEEEEEcC
Confidence 99999999999999999877677898999999999999999999999999999999999999999999999986
No 2
>3hqn_D Pyruvate kinase, PK; TIM barrel, T-state enzyme, transferase, allosteric enzyme, binding, glycolysis, magnesium, metal-binding, NUCL binding; 2.00A {Leishmania mexicana} PDB: 1pkl_A 3hqo_K* 3hqp_A* 3hqq_A* 3is4_A* 3ktx_A* 3qv6_A* 3qv7_D* 3qv8_D* 3srk_A* 3e0w_A 3e0v_A 3pp7_A* 3qv9_A*
Probab=100.00 E-value=4e-130 Score=1055.25 Aligned_cols=479 Identities=30% Similarity=0.515 Sum_probs=447.7
Q ss_pred HhhhhcCCCCCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHHHHHHhccccccce
Q psy6272 38 NHLEQLNLDSPVRGVNLTNIMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKLAIEEVSLEECKVV 116 (547)
Q Consensus 38 ~h~~~l~i~~~~~~~r~tkIi~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~a~~~~~~~~~~~~ 116 (547)
..++.|+.. ++..+|+|||||||||+|+++|+|++|+++|||||||| |||+||+|.+ +|+++|++++++ ++
T Consensus 6 ~~~~~~~~~-~~~~~rkTKIv~TiGPas~~~e~l~~Li~aGmnv~RlNfSHG~~e~h~~-~i~~iR~~~~~~------g~ 77 (499)
T 3hqn_D 6 HNLTLSIFD-PVANYRAARIICTIGPSTQSVEALKGLIQSGMSVARMNFSHGSHEYHQT-TINNVRQAAAEL------GV 77 (499)
T ss_dssp HHHTCCTTS-CCCSSCCSEEEEECSTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHH-HHHHHHHHHHHH------TC
T ss_pred HHHHhccCC-CcccCCCeEEEEEECCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHH-HHHHHHHHHHHh------CC
Confidence 557777765 67789999999999999999999999999999999999 9999999999 999999999987 79
Q ss_pred eeEEEEecCCCeeeeeccCCCCccCCCCCcccEEEecCCEEEEeeccccccCCCccEEEecCCCcccccCCCCEEEEec-
Q psy6272 117 TCAVAIETKGTQLRTGKLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVYIDR- 195 (547)
Q Consensus 117 ~i~I~~Dl~GpkiRtG~l~~p~~~~~~~~~~~i~L~~G~~v~lt~~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idD- 195 (547)
||+|++||+|||||||.+. ++ ..+ |++||+|+||++..+...|+.+.|+|||++|+++|++||+||+||
T Consensus 78 ~vaIl~Dl~GPkIR~g~~~-------~~--~~v-L~~G~~~~lt~~~~~~~~g~~~~i~v~y~~l~~~v~~G~~ilidDG 147 (499)
T 3hqn_D 78 NIAIALDTKGPEIRTGQFV-------GG--DAV-MERGATCYVTTDPAFADKGTKDKFYIDYQNLSKVVRPGNYIYIDDG 147 (499)
T ss_dssp CCEEEEECCCCCCBBCCBG-------GG--EEE-ECTTCEEEEECCGGGTTCBCSSEEEBSCTTHHHHCCTTCEEEETTT
T ss_pred cEEEEEeCCCCEEeeeccC-------CC--CeE-EcCCCEEEEEecCcccCCCCCCEEecchHHHHhhcCCCCEEEEeCC
Confidence 9999999999999999997 43 257 999999999998766667889999999999999999999999999
Q ss_pred eeEEEEEEEe-CCeEEEEEEeCcEeCCCceeeeCCCCcCCCCCChhhHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHH
Q psy6272 196 NIKLKVVEKE-NNDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVVDLIVREAVDIIIMSSVTGANSIREMRGML 274 (547)
Q Consensus 196 ~I~l~V~~v~-~~~v~~~V~~gG~L~s~Kginlp~~~~~lp~lt~~D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l 274 (547)
+|.|+|.+++ ++.+.|+|++||.|+++||||+||+.+++|+||++|++||+|++++|+|+|++|||++++|++++|++|
T Consensus 148 ~i~l~V~~~~~~~~i~~~v~~gG~L~~~KgvNlPg~~~~lp~ltekD~~dl~~~~~~~vD~i~~sfVr~a~dv~~~r~~l 227 (499)
T 3hqn_D 148 ILILQVQSHEDEQTLECTVTNSHTISDRRGVNLPGCDVDLPAVSAKDRVDLQFGVEQGVDMIFASFIRSAEQVGDVRKAL 227 (499)
T ss_dssp TEEEEEEEEEETTEEEEEECSCEEEETTCBEECTTSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHH
T ss_pred EEEEEEEEEcCCCeEEEEEEeCcEeeCCCceecCCCCCCCCCCCHHHHHHHHHHHHcCCCEEEecCCCCHHHHHHHHHHH
Confidence 9999999998 679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCC------
Q psy6272 275 EDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILP------ 348 (547)
Q Consensus 275 ~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le------ 348 (547)
++.|.++.|||||||++|++|||||++++|||||||||||+|+|+++|+.+||+|+++||++|||||+||||||
T Consensus 228 ~~~~~~i~IiaKIE~~eav~nldeIl~~sDgImVaRGDLgvEi~~e~vp~~Qk~iI~~c~~agkpVi~ATQmLeSMi~~p 307 (499)
T 3hqn_D 228 GPKGRDIMIICKIENHQGVQNIDSIIEESDGIMVARGDLGVEIPAEKVVVAQKILISKCNVAGKPVICATQMLESMTYNP 307 (499)
T ss_dssp CGGGTTSEEEEEECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTSS
T ss_pred HhcCCCCeEEEEECCHHHHHhHHHHHHhCCcEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEeehhHHHhccCC
Confidence 99899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccccCccchhhHHHHHHhCccEEeeCCcchHH-----HHHHHHHHHHHHhhhhhhhHHHHHHhhhcCCCCCChh
Q psy6272 349 DHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAH-----HRVDILKEILKKTESVLWEKQVFEDLCALACPPLDPA 423 (547)
Q Consensus 349 ~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~-----eaV~~m~~I~~~aE~~~~~~~~f~~~~~~~~~~~~~~ 423 (547)
+|||||+ +||||||+||+||+||| ||||. |||++|++||+++|++++|...|..+....+.+.+..
T Consensus 308 ~PTRAEv--------sDVanaV~dG~DavMLS-gETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~ 378 (499)
T 3hqn_D 308 RPTRAEV--------SDVANAVFNGADCVMLS-GETAKGKYPNEVVQYMARICLEAQSALNEYVFFNSIKKLQHIPMSAD 378 (499)
T ss_dssp SCCHHHH--------HHHHHHHHHTCSEEEES-HHHHTCSCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHTCCSSCCHH
T ss_pred CccHHHH--------HHHHHHHHcCCcEEEEe-ccccCCCCHHHHHHHHHHHHHHHHhcchhHHHHhhhhhccCCCCCHH
Confidence 9999999 99999999999999999 99998 9999999999999999888888876655445567889
Q ss_pred hHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCCCCCEEEEeCchhccccccccccceEEeecCCCCCCCCCCHHHH
Q psy6272 424 HSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRNPQADWSMDVDCR 503 (547)
Q Consensus 424 ~~ia~aav~~a~~~~a~aIvv~T~sG~tA~~isk~RP~~pIiavt~~~~~ar~l~l~~GV~p~~~~~~~~~~~~~d~d~~ 503 (547)
+++|.+|+++|++++|+|||+||.||+||+++|||||+|||||+|++++++|||+|+|||+|++++....++ .++.|.+
T Consensus 379 ~aia~aa~~~A~~l~a~aIv~~T~SG~tA~~isr~RP~~pIia~T~~~~~~r~l~L~~GV~p~~~~~~~~~~-~~~~d~~ 457 (499)
T 3hqn_D 379 EAVCSSAVNSVYETKAKAMVVLSNTGRSARLVAKYRPNCPIVCVTTRLQTCRQLNITQGVESVFFDADKLGH-DEGKEHR 457 (499)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCHHHHCC-CTTCHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHhhCCCCCEEEEcCCHHHHHHhhccCCeEEEEeccccccc-cCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999986532111 3578999
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEEecccCCCCCCcEEEEEEe
Q psy6272 504 VQFAIQHGMEIGIISPGDPLVLINGWRKGAGFTNIMRVVYA 544 (547)
Q Consensus 504 I~~a~~~~k~~g~~~~Gd~vvvv~g~~~g~g~tntirv~~v 544 (547)
+++|+++++++|++++||.||+++||+.++|+||+|||+.|
T Consensus 458 ~~~a~~~~~~~g~~~~GD~vVv~~G~~~~~G~TN~~rv~~v 498 (499)
T 3hqn_D 458 VAAGVEFAKSKGYVQTGDYCVVIHADHKVKGYANQTRILLV 498 (499)
T ss_dssp HHHHHHHHHHTTSCCTTCEEEEEEECC-----CEEEEEEEC
T ss_pred HHHHHHHHHHcCCCCCcCEEEEEeCCCCCCCCCeEEEEEEc
Confidence 99999999999999999999999999988999999999986
No 3
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=100.00 E-value=3.1e-129 Score=1054.92 Aligned_cols=480 Identities=25% Similarity=0.421 Sum_probs=439.4
Q ss_pred hhhHHHhhhhcCCCCCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHHHHHHhccc
Q psy6272 33 ADRYLNHLEQLNLDSPVRGVNLTNIMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKLAIEEVSLE 111 (547)
Q Consensus 33 ~~~~l~h~~~l~i~~~~~~~r~tkIi~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~a~~~~~~~ 111 (547)
+.--|+++|.. +..+..+.|+|||||||||||+++++|++|+++|||||||| |||++|+|.+ +++++|++.+..
T Consensus 25 ~~~~~~~~~~~-~~~~~~~~RrTKIv~TlGPas~~~e~l~~Li~aGmnv~RlNfSHg~~e~h~~-~i~~iR~~~~~~--- 99 (526)
T 4drs_A 25 TCLGMDKICSP-LADNDVTQRKTQIICTIGPSCNNVESLIGLIDKGMSVARLNFSHGDHESHFK-TLQNIREAAKAR--- 99 (526)
T ss_dssp HHHHHHHC----------CCCCSEEEEECCGGGCSHHHHHHHHHHTCCEEEEETTSSCHHHHHH-HHHHHHHHHHTC---
T ss_pred ccccchhhhcc-cccCCcccCCceEEEeeCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHH-HHHHHHHHHHhc---
Confidence 34457888876 34445678999999999999999999999999999999999 9999999999 999999997632
Q ss_pred cccceeeEEEEecCCCeeeeeccCCCCccCCCCCcccEEEecCCEEEEeeccccccCCCccEEEecCCCcccccCCCCEE
Q psy6272 112 ECKVVTCAVAIETKGTQLRTGKLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIV 191 (547)
Q Consensus 112 ~~~~~~i~I~~Dl~GpkiRtG~l~~p~~~~~~~~~~~i~L~~G~~v~lt~~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I 191 (547)
.++||+|++||+|||||||.+. ++ .+++|++||+|+|+++.. ..|+.+.|+|+|++++++|++||+|
T Consensus 100 --~~~~vaIl~Dl~GPkIR~g~~~-------~~--~~i~L~~G~~v~lt~~~~--~~g~~~~i~v~y~~l~~~v~~Gd~I 166 (526)
T 4drs_A 100 --PHSTVGIMLDTKGPEIRTGMLE-------GG--KPIELKAGQTLKITTDYS--MLGNSECISCSYSLLPKSVQIGSTV 166 (526)
T ss_dssp --TTCCCEEEEECCCSCCBBCCBS-------TT--CCEECCTTSEEEEESCCS--SCBCSSEEEBSCTTSTTTCCTTCEE
T ss_pred --CCCceEEEEECCCCeeEEEecC-------CC--CeEEecCCCEEEEEeCCc--cCCCcceeeecchhhHHHhcCCCEE
Confidence 2789999999999999999998 43 369999999999999854 3578889999999999999999999
Q ss_pred EEec-eeEEEEEEEeCCeEEEEEEeCcEeCCCceeeeCCCCcCCCCCChhhHHH-HHHHHHcCCcEEEEcccCChhhHHH
Q psy6272 192 YIDR-NIKLKVVEKENNDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHV-VDLIVREAVDIIIMSSVTGANSIRE 269 (547)
Q Consensus 192 ~idD-~I~l~V~~v~~~~v~~~V~~gG~L~s~Kginlp~~~~~lp~lt~~D~~d-i~~~~~~g~d~I~~sfV~sa~di~~ 269 (547)
|||| +|.|+|.+++++.+.|+|.+||.|+++|||||||..+++|+||+||..| |+||+++|+|+|++|||++++|+.+
T Consensus 167 lidDG~i~l~V~~v~~~~i~~~V~~gG~L~~~KgvNlP~~~l~lp~lTekD~~D~l~fa~~~~vD~ialSFVr~~~Dv~~ 246 (526)
T 4drs_A 167 LIADGSLSTQVLEIGDDFIVCKVLNSVTIGERKNMNLPGCKVHLPIIGDKDRHDIVDFALKYNLDFIALSFVQNGADVQL 246 (526)
T ss_dssp EETTTTEEEEEEEECSSEEEEECCSCCEECSSCBEECTTCCCCCCSSCHHHHHHHHHTTTTTTCSEEEETTCCSHHHHHH
T ss_pred EEeCCCceEEEEEEeCCeEEEEeccCccccccccccCCCcccCcccccchhHHHHHHHHHHhccCeeeecccCchhhHHH
Confidence 9999 9999999999999999999999999999999999999999999999998 6899999999999999999999999
Q ss_pred HHHHHHhcC-------CCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEE
Q psy6272 270 MRGMLEDHV-------DRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 270 ~r~~l~~~~-------~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~ 342 (547)
+|++|++.+ .+++||||||+++|++|||||++++|||||||||||+|+|+|+||.+||+||++|+++|||||+
T Consensus 247 ~r~~l~~~g~~~~~~~~~i~IiaKIE~~~av~NldeIi~~sDgIMVARGDLgvEip~e~vp~~QK~II~~c~~~gKPVI~ 326 (526)
T 4drs_A 247 CRQIISENTQYSNGIPSSIKIISKIENLEGVINFDSICSESDGIMVARGDLGMEIPPEKIFVAQKCMISKCNVAGKPVVT 326 (526)
T ss_dssp HHHHHHTCCTTTTTCCCCCEEEEEECSHHHHHTHHHHHHHSSEEEEECTTHHHHSCGGGHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHhhCcccccccccceeeeehhccHHHHHHHHHHhhccEEEEECCcccccCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 999999876 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCC------CCCcccccccCccchhhHHHHHHhCccEEeeCCcchHH-----HHHHHHHHHHHHhhhhhhhHHHHHH
Q psy6272 343 VGDILP------DHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAH-----HRVDILKEILKKTESVLWEKQVFED 411 (547)
Q Consensus 343 aTq~Le------~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~-----eaV~~m~~I~~~aE~~~~~~~~f~~ 411 (547)
|||||| +|||||+ +||||||+||+||+||| ||||. |||++|++||+++|++++|+..|+.
T Consensus 327 ATQmLeSMi~np~PTRAEv--------sDVAnAV~DGaDavMLS-gETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~ 397 (526)
T 4drs_A 327 ATQMLESMIKSNRPTRAEM--------TDVANAVLDGSDCVMLS-GETANGAFPFDAVNVMSRVCAQAETCIDYPVLYHA 397 (526)
T ss_dssp ESCTTGGGGSSSSCCHHHH--------HHHHHHHHHTCSEEEES-HHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred hhhhhHHHhhCCCCCCchH--------HHHHHHHHhCCceEEEc-chhhcccCHHHHHHHHHHHHHHHhhcccchhhhhh
Confidence 999999 9999999 99999999999999999 99999 9999999999999999999888887
Q ss_pred hhhcCCCCCChhhHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCCCCCEEEEeCchhccccccccccceEEeecCC
Q psy6272 412 LCALACPPLDPAHSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRN 491 (547)
Q Consensus 412 ~~~~~~~~~~~~~~ia~aav~~a~~~~a~aIvv~T~sG~tA~~isk~RP~~pIiavt~~~~~ar~l~l~~GV~p~~~~~~ 491 (547)
+....+.+.+..++||.+|+++|.+++|+|||+||.||+||+++|||||+|||||+|++++++|||+|+|||+|++++.
T Consensus 398 ~~~~~~~~~~~~~aia~aa~~~A~~l~a~aIv~~T~sG~tA~~iSr~RP~~pI~a~T~~~~~~r~l~L~wGV~p~~~~~- 476 (526)
T 4drs_A 398 IHSSVPKPVAVPEAIACSAVESAHDVNAKLIITITETGNTARLISKYRPSQTIIACTAKPEVARGLKIARGVKTYVLNS- 476 (526)
T ss_dssp HHHHSCSSCCHHHHHHHHHHHHHHHTTCSEEEEECSSSHHHHHHHHTCCSSEEEEEESCHHHHHHGGGSTTEEEEECSC-
T ss_pred hhhccCCCCCHHHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHhhCCCCCEEEECCCHHHHHhhhccCCeEEEEeCC-
Confidence 7666667788999999999999999999999999999999999999999999999999999999999999999999864
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHcCCCCCCCeEEEEecccCC-CCCCcEEEEEEee
Q psy6272 492 PQADWSMDVDCRVQFAIQHGMEIGIISPGDPLVLINGWRKG-AGFTNIMRVVYAP 545 (547)
Q Consensus 492 ~~~~~~~d~d~~I~~a~~~~k~~g~~~~Gd~vvvv~g~~~g-~g~tntirv~~v~ 545 (547)
..+.|.+++.|+++++++|++++||.||+++|++.| +|+||+|||++||
T Consensus 477 -----~~~~d~~i~~a~~~~~~~g~~~~GD~vVi~~G~p~g~~G~TN~lrv~~VP 526 (526)
T 4drs_A 477 -----IHHSEVVISNALALAKEESLIESGDFAIAVHGVKESCPGSCNLMKIVRCP 526 (526)
T ss_dssp -----CCCHHHHHHHHHHHHHHTTSCCTTCEEEEEC----------CCEEEEECC
T ss_pred -----CCCHHHHHHHHHHHHHHCCCCCCcCEEEEEeccCCCCCCcceEEEEEECC
Confidence 378999999999999999999999999999999998 8999999999997
No 4
>3khd_A Pyruvate kinase; malaria, structural genomics, structural GE consortium, SGC, transferase; 2.70A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=3e-129 Score=1050.39 Aligned_cols=463 Identities=29% Similarity=0.462 Sum_probs=430.6
Q ss_pred CCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHHHHH-HhccccccceeeEEEEecC
Q psy6272 48 PVRGVNLTNIMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKLAIE-EVSLEECKVVTCAVAIETK 125 (547)
Q Consensus 48 ~~~~~r~tkIi~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~a~~-~~~~~~~~~~~i~I~~Dl~ 125 (547)
++..+|+|||||||||||+++|+|++|+++|||||||| |||++|+|.+ +|+++|++++ ++ ++||+|++||+
T Consensus 41 ~~~~~rkTKIV~TiGPas~s~e~l~~Li~aGmnv~RlNfSHG~~e~h~~-~i~~iR~~~~~~~------~~~vaIllDl~ 113 (520)
T 3khd_A 41 VNLRSKKTHIVCTLGPACKSVETLVKLIDAGMDICRFNFSHGSHEDHKE-MFNNVLKAQELRP------NCLLGMLLDTK 113 (520)
T ss_dssp CCGGGCSSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHH-HHHHHHHHHHHCS------SCCCEEEEECC
T ss_pred CcccCCCcEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHH-HHHHHHHHHHHhc------CCceEEEEeCC
Confidence 45678999999999999999999999999999999999 9999999999 9999999988 54 79999999999
Q ss_pred CCeeeeeccCCCCccCCCCCcccEEEecCCEEEEeeccccccCCCccEEEecCCCcccccCCCCEEEEec-eeEEEEEEE
Q psy6272 126 GTQLRTGKLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVYIDR-NIKLKVVEK 204 (547)
Q Consensus 126 GpkiRtG~l~~p~~~~~~~~~~~i~L~~G~~v~lt~~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idD-~I~l~V~~v 204 (547)
|||||||.+. ++ .++|++||+|+||++. ...|+.+.|+|+|++|+++|++||+||+|| +|.|+|.++
T Consensus 114 GPkIR~G~~~-------~~---~~~L~~G~~~~lt~~~--~~~g~~~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~ 181 (520)
T 3khd_A 114 GPEIRTGFLK-------NK---EVHLKEGSKLKLVTDY--EFLGDETCIACSYKKLPQSVKPGNIILIADGSVSCKVLET 181 (520)
T ss_dssp CCCEEBCEEC---------------------CEEESCT--TCEECTTEEEBSCTTHHHHCCC-CEEEETTTTEEEEEEEE
T ss_pred CCeEEeeccC-------CC---CeEecCCCEEEEecCC--CcCCCccEEecccHHHHhhcCcCcEEEEeCCEEEEEEEEE
Confidence 9999999998 44 4699999999999873 246788899999999999999999999999 999999999
Q ss_pred eCCeEEEEEEeCcEeCCCceeeeCCCCcCCCCCChhhHHHH-HHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceE
Q psy6272 205 ENNDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVV-DLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLI 283 (547)
Q Consensus 205 ~~~~v~~~V~~gG~L~s~Kginlp~~~~~lp~lt~~D~~di-~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~I 283 (547)
+++.+.|+|++||.|+++||||+||+.+++|+||++|++|| +|++++|+|+|++|||++++|+.++|++|++.|.++.|
T Consensus 182 ~~~~v~~~V~~gG~L~~~KgvNlPg~~~~lp~lTekD~~dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~g~~i~I 261 (520)
T 3khd_A 182 HEDHVITEVLNSAVIGERKNMNLPNVKVDLPIISEKDKNDILNFAIPMGCNFIAASFIQSADDVRLIRNLLGPRGRHIKI 261 (520)
T ss_dssp CSSCEEEEECC-CCCCSSCEEECTTSCCCSCSSCHHHHHHHHHTHHHHTCCEEEETTCCSHHHHHHHHHHHTTTTTTSEE
T ss_pred ECCEEEEEEEeCeEEeCCceeecCCCcCCCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHhcCCCCcE
Confidence 99999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred EEEecCHHHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCC------CCCcccccc
Q psy6272 284 LAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILP------DHNVEEYSD 357 (547)
Q Consensus 284 iakIEt~~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le------~PtraE~~~ 357 (547)
||||||++|++|+|||++++|||||||||||+|+|+++|+.+||+|+++||++|||||+|||||| +|||||+
T Consensus 262 IAKIE~~eav~nldeIl~~sDGIMVARGDLgvEi~~e~vp~~Qk~iI~~c~~aGKPVi~ATQMLeSMi~~p~PTRAEv-- 339 (520)
T 3khd_A 262 IPKIENIEGIIHFDKILAESDGIMIARGDLGMEISPEKVFLAQKLMISKCNLQGKPIITATQMLESMTKNPRPTRAEV-- 339 (520)
T ss_dssp EEEECSHHHHHTHHHHHHHSSCEEECHHHHTTTSCGGGHHHHHHHHHHHHHHHTCCEEECCCCCGGGGTCSSCCHHHH--
T ss_pred EEEECCHHHHHhHHHHHHhCCcEEEccccccccCCHHHHHHHHHHHHHHHHHcCCCeEEeehhhHHHhcCCCccHHHH--
Confidence 99999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred cCccchhhHHHHHHhCccEEeeCCcchHH-----HHHHHHHHHHHHhhhhhhhHHHHHHhhhcCCCCCChhhHHHHHHHH
Q psy6272 358 VSIGDMNDVNSIVQDGADVVVLTQSEQAH-----HRVDILKEILKKTESVLWEKQVFEDLCALACPPLDPAHSIVIACVN 432 (547)
Q Consensus 358 ~~~~~~~Dv~nav~~g~D~vmLsk~Eta~-----eaV~~m~~I~~~aE~~~~~~~~f~~~~~~~~~~~~~~~~ia~aav~ 432 (547)
+||||||+||+||+||| ||||. |||++|++||+++|++++|...|..+....+.+.+..+++|.+|++
T Consensus 340 ------sDVanAVldGaDavMLS-gETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~ 412 (520)
T 3khd_A 340 ------TDVANAVLDGTDCVMLS-GETAGGKFPVEAVTIMSKICLEAEACIDYKLLYQSLVNAIETPISVQEAVARSAVE 412 (520)
T ss_dssp ------HHHHHHHHHTCSEEEES-HHHHSCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHH
T ss_pred ------HHHHHHHHhCCCEEEec-ccccCCcCHHHHHHHHHHHHHHHHhhhhhhhhHhhhhhccCCCCCHHHHHHHHHHH
Confidence 99999999999999999 99998 9999999999999999888877776654444567889999999999
Q ss_pred HHHhcCCcEEEEEcCCchHHHHHHhcCCCCCEEEEeCchhccccccccccceEEeecCCCCCCCCCCHHHHHHHHHHHHH
Q psy6272 433 AALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRNPQADWSMDVDCRVQFAIQHGM 512 (547)
Q Consensus 433 ~a~~~~a~aIvv~T~sG~tA~~isk~RP~~pIiavt~~~~~ar~l~l~~GV~p~~~~~~~~~~~~~d~d~~I~~a~~~~k 512 (547)
+|++++|+|||+||.||+||+++|||||+|||||+|++++++|||+|+|||+|++++.. .+.|.+++.|+++++
T Consensus 413 ~A~~l~a~aIv~~T~SG~TA~~vSr~RP~~PIia~T~~~~~~r~l~L~~GV~p~~~~~~------~~~d~~~~~a~~~~~ 486 (520)
T 3khd_A 413 TAESIQASLIIALTETGYTARLIAKYKPSCTILALSASDSTVKCLNVHRGVTCIKVGSF------QGTDIVIRNAIEIAK 486 (520)
T ss_dssp HHHHTTCSEEEEECSSSHHHHHHHHTCCSSEEEEEESCHHHHHHGGGSTTEEEEECCSC------CCHHHHHHHHHHHHH
T ss_pred HHHhcCCCEEEEECCCcHHHHHHHhcCCCCCEEEEcCCHHHHHHHhccCCeEEEEeCCC------CCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998753 689999999999999
Q ss_pred HcCCCCCCCeEEEEecccCC-CCCCcEEEEEEe
Q psy6272 513 EIGIISPGDPLVLINGWRKG-AGFTNIMRVVYA 544 (547)
Q Consensus 513 ~~g~~~~Gd~vvvv~g~~~g-~g~tntirv~~v 544 (547)
++|++++||.||+++||+.| +|+||+|||+.|
T Consensus 487 ~~g~~~~GD~vVv~~G~~~g~~G~TN~lrv~~v 519 (520)
T 3khd_A 487 QRNMAKVGDSVIAIHGIKEEVSGGTNLMKVVQI 519 (520)
T ss_dssp HTTSSCTTCEEEEEEC-CCSSTTCEEEEEEEEC
T ss_pred HCCCCCCcCEEEEEeCccCCCCCCCeEEEEEEe
Confidence 99999999999999999998 899999999986
No 5
>3gg8_A Pyruvate kinase; malaria, genomics, proteomics, glycolysis, magnesium, transferase, structural genomics, STRU genomics consortium, SGC; 2.21A {Toxoplasma gondii} PDB: 3eoe_A
Probab=100.00 E-value=1.7e-127 Score=1036.17 Aligned_cols=463 Identities=28% Similarity=0.465 Sum_probs=433.8
Q ss_pred CCCCceEEEecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHHHHHHhccccccceeeEEEEecCCCee
Q psy6272 51 GVNLTNIMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKLAIEEVSLEECKVVTCAVAIETKGTQL 129 (547)
Q Consensus 51 ~~r~tkIi~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~a~~~~~~~~~~~~~i~I~~Dl~Gpki 129 (547)
..|+|||||||||||+++|+|++|+++|||||||| |||++++|.+ +|+++|++++++. ++||+|++||+||||
T Consensus 34 ~~rkTKIV~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~-~i~~iR~~~~~~~-----~~~vaIl~Dl~GPkI 107 (511)
T 3gg8_A 34 TAHRTRIVCTMGPACWNVDTLVKMIDAGMNVCRLNFSHGDHETHAR-TVQNIQEAMKQRP-----EARLAILLDTKGPEI 107 (511)
T ss_dssp TTCSSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHH-HHHHHHHHHHHCT-----TCCCEEEEECCCCCC
T ss_pred ccCccEEEEeeCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHH-HHHHHHHHHHHcC-----CCceEEEEECCCCEE
Confidence 57999999999999999999999999999999999 9999999999 9999999998852 689999999999999
Q ss_pred eeeccCCCCccCCCCCcccEEEecCCEEEEeeccccccCCCccEEEecCCCcccccCCCCEEEEec-eeEEEEEEEeCCe
Q psy6272 130 RTGKLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVYIDR-NIKLKVVEKENND 208 (547)
Q Consensus 130 RtG~l~~p~~~~~~~~~~~i~L~~G~~v~lt~~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idD-~I~l~V~~v~~~~ 208 (547)
|||.+. ++ .+++|++||+|+||++. ...|+.+.|+|+|++|+++|++||+||||| +|.|+|.+++++.
T Consensus 108 R~g~~~-------~~--~~v~L~~G~~~~lt~~~--~~~g~~~~i~v~y~~l~~~v~~Gd~IlidDG~i~l~V~~v~~~~ 176 (511)
T 3gg8_A 108 RTGFLK-------DH--KPITLQQGATLKIVTDY--NLIGDETTIACSYGALPQSVKPGNTILIADGSLSVKVVEVGSDY 176 (511)
T ss_dssp BBCC--------------CEEECTTCEEEEESCT--TCCCCSSEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEECSSE
T ss_pred ecccCC-------CC--CCEEEccCCEEEEEECC--CCCCCCCEEEcchHHHHhhcCCCCEEEEECCEEEEEEEEEeCCE
Confidence 999997 42 26999999999999872 356888999999999999999999999999 9999999999999
Q ss_pred EEEEEEeCcEeCCCceeeeCCCCcCCCCCChhhHHHH-HHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEe
Q psy6272 209 VHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVV-DLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKI 287 (547)
Q Consensus 209 v~~~V~~gG~L~s~Kginlp~~~~~lp~lt~~D~~di-~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakI 287 (547)
+.|+|++||.|+++||||+||+.+++|+||++|++|| +|++++|+|+|++|||++++|++++|++|++.|.+++|||||
T Consensus 177 i~~~V~~gG~L~~~KgvNlPg~~~~lp~lTekD~~Dl~~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l~~~~~~~~iiaKI 256 (511)
T 3gg8_A 177 VITQAQNTATIGERKNMNLPNVKVQLPVIGEKDKHDILNFGIPMGCNFIAASFVQSADDVRYIRGLLGPRGRHIRIIPKI 256 (511)
T ss_dssp EEEEESSCEEECSSCBEECTTCCCCSCSSCHHHHHHHHHTTTTTTCCEEEETTCCSHHHHHHHHHHHTGGGTTCEEEEEE
T ss_pred EEEEEEeCeEEcCCcceecCCCccCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHHHhcCCCCeEEEEE
Confidence 9999999999999999999999999999999999999 999999999999999999999999999999999999999999
Q ss_pred cCHHHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCC------CCCcccccccCcc
Q psy6272 288 ETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILP------DHNVEEYSDVSIG 361 (547)
Q Consensus 288 Et~~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le------~PtraE~~~~~~~ 361 (547)
||++|++|||||++++|||||||||||+|+|+++|+.+||+|+++|+++|||||+|||||| +|||||+
T Consensus 257 E~~eav~nldeIl~~sDgimVaRGDLgvei~~e~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAEv------ 330 (511)
T 3gg8_A 257 ENVEGLVNFDEILAEADGIMIARGDLGMEIPPEKVFLAQKMMIAKCNVVGKPVITATQMLESMIKNPRPTRAEA------ 330 (511)
T ss_dssp CSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHH------
T ss_pred CCHHHHHhHHHHHHhCCeEEEecchhcCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCCCccHHHH------
Confidence 9999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred chhhHHHHHHhCccEEeeCCcchHH-----HHHHHHHHHHHHhhhhhhhHHHHHHhhhcCCCCCChhhHHHHHHHHHHHh
Q psy6272 362 DMNDVNSIVQDGADVVVLTQSEQAH-----HRVDILKEILKKTESVLWEKQVFEDLCALACPPLDPAHSIVIACVNAALK 436 (547)
Q Consensus 362 ~~~Dv~nav~~g~D~vmLsk~Eta~-----eaV~~m~~I~~~aE~~~~~~~~f~~~~~~~~~~~~~~~~ia~aav~~a~~ 436 (547)
+||||||+||+||+||| ||||. |||++|++||+++|++++|...|+........+.+..+++|.+|+++|.+
T Consensus 331 --sDVAnAV~dGaDavMLS-gETA~G~yPveaV~~M~~I~~~aE~~~~~~~~~~~~~~~~~~~~~~~~aia~aa~~~A~~ 407 (511)
T 3gg8_A 331 --ADVANAVLDGTDCVMLS-GETANGEFPVITVETMARICYEAETCVDYPALYRAMCLAVPPPISTQEAVARAAVETAEC 407 (511)
T ss_dssp --HHHHHHHHHTCSEEEES-HHHHTCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHhCCCEEEec-ccccCCCCHHHHHHHHHHHHHHHHhchhHHHHHhhhhhcccCCCCHHHHHHHHHHHHHHh
Confidence 99999999999999999 99998 99999999999999998887777665444445678899999999999999
Q ss_pred cCCcEEEEEcCCchHHHHHHhcCCCCCEEEEeCchhccccccccccceEEeecCCCCCCCCCCHHHHHHHHHHHHHHcCC
Q psy6272 437 CQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRNPQADWSMDVDCRVQFAIQHGMEIGI 516 (547)
Q Consensus 437 ~~a~aIvv~T~sG~tA~~isk~RP~~pIiavt~~~~~ar~l~l~~GV~p~~~~~~~~~~~~~d~d~~I~~a~~~~k~~g~ 516 (547)
++|+|||+||.||+||+++|||||+|||||+|++++++|||+|+|||+|++++.. .+.|.++++|+++++++|+
T Consensus 408 l~a~aIv~~T~SG~tA~~iSr~RP~~PIia~T~~~~~~r~l~L~~GV~p~~~~~~------~~~d~~~~~a~~~~~~~g~ 481 (511)
T 3gg8_A 408 VNAAIILALTETGQTARLIAKYRPMQPILALSASESTIKHLQVIRGVTTMQVPSF------QGTDHVIRNAIVVAKEREL 481 (511)
T ss_dssp HTCSEEEEECSSSHHHHHHHHTCCSSCEEEEESCHHHHHHGGGSTTEEEEECCC--------CHHHHHHHHHHHHHHTTS
T ss_pred cCCCEEEEECCCchHHHHHHhhCCCCCEEEEcCCHHHHHHhhccCCeEEEEeCCC------CCHHHHHHHHHHHHHHCCC
Confidence 9999999999999999999999999999999999999999999999999998654 6789999999999999999
Q ss_pred CCCCCeEEEEecccCC-CCCCcEEEEEEee
Q psy6272 517 ISPGDPLVLINGWRKG-AGFTNIMRVVYAP 545 (547)
Q Consensus 517 ~~~Gd~vvvv~g~~~g-~g~tntirv~~v~ 545 (547)
+++||.||+++|++.| +|+||+|||+.|+
T Consensus 482 ~~~GD~vVi~~G~~~g~~G~TN~lrv~~v~ 511 (511)
T 3gg8_A 482 VTEGESIVAVHGMKEEVAGSSNLLKVLTVE 511 (511)
T ss_dssp CCTTCEEEEEEEC------CCEEEEEEECC
T ss_pred CCCcCEEEEEeCccCCCCCCCeEEEEEEcC
Confidence 9999999999999998 8999999999875
No 6
>3t05_A Pyruvate kinase, PK; tetramer, glycolysis, transferase; 3.05A {Staphylococcus aureus subsp} PDB: 3t07_A* 3t0t_A*
Probab=100.00 E-value=4.7e-126 Score=1044.18 Aligned_cols=469 Identities=26% Similarity=0.437 Sum_probs=438.7
Q ss_pred hhhhcCCCCCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHHHHHHhcccccccee
Q psy6272 39 HLEQLNLDSPVRGVNLTNIMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKLAIEEVSLEECKVVT 117 (547)
Q Consensus 39 h~~~l~i~~~~~~~r~tkIi~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~a~~~~~~~~~~~~~ 117 (547)
|-+.|--.+ |..+|+|||||||||+|+++|+|++|+++|||||||| |||++|+|.+ +|+++|++++++ ++|
T Consensus 10 ~~~~~~~~~-~~~~r~TKIv~TiGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~-~i~~iR~~~~~~------~~~ 81 (606)
T 3t05_A 10 HSSGLVPRG-SHMMRKTKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKG-RIDTIRKVAKRL------DKI 81 (606)
T ss_dssp -------------CCCSEEEEECCGGGCSHHHHHHHHHTTEEEEEEETTSSCHHHHHH-HHHHHHHHHHHT------TCC
T ss_pred ccCCcCcCC-cccccCceEEEEcCCCCCCHHHHHHHHHcCCCEEEEECCCCCHHHHHH-HHHHHHHHHHHh------CCC
Confidence 444553333 5568999999999999999999999999999999999 9999999999 999999999987 799
Q ss_pred eEEEEecCCCeeeeeccCCCCccCCCCCcccEEEecCCEEEEeeccccccCCCccEEEecCCCcccccCCCCEEEEec-e
Q psy6272 118 CAVAIETKGTQLRTGKLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVYIDR-N 196 (547)
Q Consensus 118 i~I~~Dl~GpkiRtG~l~~p~~~~~~~~~~~i~L~~G~~v~lt~~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idD-~ 196 (547)
|+|++||+|||||||.+. ++ +++|++||+|+||.++ ..|+.+.|+|||++|++++++||+||||| +
T Consensus 82 vail~Dl~GPkiR~g~~~-------~~---~i~L~~G~~~~lt~~~---~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~ 148 (606)
T 3t05_A 82 VAILLDTKGPEIRTHNMK-------DG---IIELERGNEVIVSMNE---VEGTPEKFSVTYENLINDVQVGSYILLDDGL 148 (606)
T ss_dssp CEEEEECCCCCCBBCCBT-------TS---EEECCSSCEEEEESSC---CCBCSSEEEBSCTTHHHHCCTTCEEEETTTT
T ss_pred EEEEEeCCCCEEEeecCC-------CC---CEEEcCCCEEEEEecC---cCCCCCEEEeccHHHHHhcCCCCEEEEeCCe
Confidence 999999999999999997 44 7999999999999986 45788899999999999999999999999 9
Q ss_pred eEEEE--EEEeCCeEEEEEEeCcEeCCCceeeeCCCCcCCCCCChhhHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHH
Q psy6272 197 IKLKV--VEKENNDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVVDLIVREAVDIIIMSSVTGANSIREMRGML 274 (547)
Q Consensus 197 I~l~V--~~v~~~~v~~~V~~gG~L~s~Kginlp~~~~~lp~lt~~D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l 274 (547)
|.|+| .+++++.+.|+|++||.|+++|||||||+.+++|+||+||++||+|++++|+|+|++|||++++|++++|++|
T Consensus 149 i~l~V~~~~~~~~~v~~~V~~gG~L~~~KgvNlPg~~~~lp~ltekD~~dl~f~~~~~vD~Ia~SFVr~a~Dv~~~r~~l 228 (606)
T 3t05_A 149 IELQVKDIDHAKKEVKCDILNSGELKNKKGVNLPGVRVSLPGITEKDAEDIRFGIKENVDFIAASFVRRPSDVLEIREIL 228 (606)
T ss_dssp EEEEEEEEETTTTEEEEEECSCCEEETTCBEECSSSCCCCCSSCHHHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHH
T ss_pred EEEEEEEEEecCCEEEEEEEECeEEeCCceEECCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHH
Confidence 99999 7788999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCC------
Q psy6272 275 EDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILP------ 348 (547)
Q Consensus 275 ~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le------ 348 (547)
++.|.+++|||||||++|++|||||++++|||||||||||+|+|+|+|+.+||+|+++|+++|||||+||||||
T Consensus 229 ~~~~~~i~IiaKIE~~eav~nldeIl~~sDGImVARGDLgvei~~e~vp~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p 308 (606)
T 3t05_A 229 EEQKANISVFPKIENQEGIDNIEEILEVSDGLMVARGDMGVEIPPEKVPMVQKDLIRQCNKLGKPVITATQMLDSMQRNP 308 (606)
T ss_dssp HHTTCCCEEEECCCSHHHHHTHHHHHHHCSCEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGTTCS
T ss_pred HhcCCCCeEEEEeCCHHHHHhHHHHHHhCCEEEEccccccCcCCHHHHHHHHHHHHHHHHHcCCCeEEehHHHHHhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccccCccchhhHHHHHHhCccEEeeCCcchHH-----HHHHHHHHHHHHhhhhhhhHHHHHHhhhcCCCCCChh
Q psy6272 349 DHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAH-----HRVDILKEILKKTESVLWEKQVFEDLCALACPPLDPA 423 (547)
Q Consensus 349 ~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~-----eaV~~m~~I~~~aE~~~~~~~~f~~~~~~~~~~~~~~ 423 (547)
+|||||+ +||||||+||+||+||| ||||. |||++|++||+++|++++|...|...... .+.+..
T Consensus 309 ~PTRAEv--------sDVanAv~dGaDavMLS-gETA~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~--~~~~~~ 377 (606)
T 3t05_A 309 RATRAEA--------SDVANAIYDGTDAVMLS-GETAAGLYPEEAVKTMRNIAVSAEAAQDYKKLLSDRTKL--VETSLV 377 (606)
T ss_dssp SCCHHHH--------HHHHHHHHHTCSEEEEC-HHHHSCSCSHHHHHHHHHHHHHHHHTSCHHHHHHHHHHH--SCCCHH
T ss_pred CccHHHH--------HHHHHHHHcCCCEEEec-ccccCCCCHHHHHHHHHHHHHHHHhhhhhHhhhhhhccc--cCCCHH
Confidence 9999999 99999999999999999 99998 99999999999999998887777655321 246789
Q ss_pred hHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCCCCCEEEEeCchhccccccccccceEEeecCCCCCCCCCCHHHH
Q psy6272 424 HSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRNPQADWSMDVDCR 503 (547)
Q Consensus 424 ~~ia~aav~~a~~~~a~aIvv~T~sG~tA~~isk~RP~~pIiavt~~~~~ar~l~l~~GV~p~~~~~~~~~~~~~d~d~~ 503 (547)
+++|.+|+++|++++|+|||+||.||+||+++|||||+|||||+|++++++|||+|+|||+|++++.. .+.|++
T Consensus 378 ~aia~aa~~~a~~l~a~aIv~~T~sG~ta~~isr~RP~~pIia~t~~~~~~r~l~L~~GV~p~~~~~~------~~~~~~ 451 (606)
T 3t05_A 378 NAIGISVAHTALNLNVKAIVAATESGSTARTISKYRPHSDIIAVTPSEETARQCSIVWGVQPVVKKGR------KSTDAL 451 (606)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEECSSSHHHHHHHHTCCSSEEEEEESCHHHHHHHHTSSSEEEEECCCC------SSHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEEcCCchHHHHHHhhCCCCCEEEEcCCHHHHHhhhccCCeEEEEeCCC------CCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998753 678999
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEEecccCC-CCCCcEEEEEEee
Q psy6272 504 VQFAIQHGMEIGIISPGDPLVLINGWRKG-AGFTNIMRVVYAP 545 (547)
Q Consensus 504 I~~a~~~~k~~g~~~~Gd~vvvv~g~~~g-~g~tntirv~~v~ 545 (547)
+++|+++++++|++++||.||+++||+.| +|+||+|||+.|.
T Consensus 452 ~~~a~~~~~~~g~~~~GD~vVi~~G~p~g~~g~tN~~~v~~v~ 494 (606)
T 3t05_A 452 LNNAVATAVETGRVTNGDLIIITAGVPTGETGTTNMMKIHLVG 494 (606)
T ss_dssp HHHHHHHHHHTTSCCTTCEEEEEECSSTTTCSSCCEEEEEECC
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEeCccCCCCCCccceEEEEec
Confidence 99999999999999999999999999988 8999999999875
No 7
>1e0t_A Pyruvate kinase, PK; phosphotransferase, glycolysis, allostery; 1.8A {Escherichia coli} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1pky_A 1e0u_A
Probab=100.00 E-value=1e-124 Score=1009.97 Aligned_cols=455 Identities=27% Similarity=0.411 Sum_probs=422.4
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHHHHHHhccccccceeeEEEEecCCCeee
Q psy6272 52 VNLTNIMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKLAIEEVSLEECKVVTCAVAIETKGTQLR 130 (547)
Q Consensus 52 ~r~tkIi~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~a~~~~~~~~~~~~~i~I~~Dl~GpkiR 130 (547)
+|+|||||||||+|+++++|++|+++|||||||| |||++++|.+ +++++|++++++ ++||+|++||+|||||
T Consensus 1 ~r~tkIv~TiGPas~~~e~l~~li~aGm~v~RlNfsHg~~e~h~~-~i~~iR~~~~~~------~~~v~il~Dl~GPkiR 73 (470)
T 1e0t_A 1 MKKTKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQ-RIQNLRNVMSKT------GKTAAILLDTKGPEIR 73 (470)
T ss_dssp CCCSEEEEECCGGGCSHHHHHHHHHHTEEEEEEETTSSCHHHHHH-HHHHHHHHHHHH------TCCCEEEEECCCCCEE
T ss_pred CCcceEEEECCCccCCHHHHHHHHHcCCCEEEEECCCCCHHHHHH-HHHHHHHHHHhc------CCceEEEEeCCCCEEE
Confidence 4899999999999999999999999999999999 9999999999 999999999987 7999999999999999
Q ss_pred eeccCCCCccCCCCCcccEEEecCCEEEEeeccccccCCCccEEEecCCCcccccCCCCEEEEec-eeEEEEEEEeCCeE
Q psy6272 131 TGKLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVYIDR-NIKLKVVEKENNDV 209 (547)
Q Consensus 131 tG~l~~p~~~~~~~~~~~i~L~~G~~v~lt~~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idD-~I~l~V~~v~~~~v 209 (547)
||.+. ++ .+++|++||+++||++.. ..|+.+.++|+|++|+++|++||+||||| +|.|+|.+++++.+
T Consensus 74 ~g~~~-------~~--~~v~L~~G~~~~lt~~~~--~~g~~~~v~v~y~~l~~~v~~Gd~ilidDG~i~l~V~~~~~~~i 142 (470)
T 1e0t_A 74 TMKLE-------GG--NDVSLKAGQTFTFTTDKS--VIGNSEMVAVTYEGFTTDLSVGNTVLVDDGLIGMEVTAIEGNKV 142 (470)
T ss_dssp BCCBG-------GG--CCEEECTTCEEEEESCTT--CCBBTTEEEBSCTTHHHHCCTTCEEEETTTTEEEEEEEEETTEE
T ss_pred EEecC-------CC--CceEEecCCEEEEEeCCc--cCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEeCCeE
Confidence 99996 22 269999999999999743 25788899999999999999999999999 99999999999999
Q ss_pred EEEEEeCcEeCCCceeeeCCCCcCCCCCChhhHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhc-CCCceEEEEec
Q psy6272 210 HCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDH-VDRVLILAKIE 288 (547)
Q Consensus 210 ~~~V~~gG~L~s~Kginlp~~~~~lp~lt~~D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~-~~~i~IiakIE 288 (547)
.|+|++||.|+|+||||+||+.+++|+||++|.+||+|++++|+|+|++|||++++|+++++++|++. +.++.||||||
T Consensus 143 ~~~v~~gG~L~~~KgvNlPg~~~~lp~ltekD~~Di~~~l~~gvD~I~lsfV~saeDv~~~~~~l~~~~~~~i~IiakIE 222 (470)
T 1e0t_A 143 ICKVLNNGDLGENKGVNLPGVSIALPALAEKDKQDLIFGCEQGVDFVAASFIRKRSDVIEIREHLKAHGGENIHIISKIE 222 (470)
T ss_dssp EEEECSCEEECSSCEEECSSCCCCCCSSCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHTTTCTTCEEEEEEC
T ss_pred EEEEecCcEEeCCceeecCCCcCCCCCCCcCCHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998 88999999999
Q ss_pred CHHHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCC------CCCcccccccCccc
Q psy6272 289 TLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILP------DHNVEEYSDVSIGD 362 (547)
Q Consensus 289 t~~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le------~PtraE~~~~~~~~ 362 (547)
|++|++|+|||++++|||||||||||+|+|.++|+.+||+|+++|+++|||||+|||||| +|||||+
T Consensus 223 t~eav~nldeI~~~sDgImVargDLgveig~e~v~~~qk~ii~~araaGkpvI~ATQMLeSMi~~p~PTRAEv------- 295 (470)
T 1e0t_A 223 NQEGLNNFDEILEASDGIMVARGDLGVEIPVEEVIFAQKMMIEKCIRARKVVITATMMLDSMIKNPRPTDAEA------- 295 (470)
T ss_dssp SHHHHHTHHHHHHHSSEEEEEHHHHHHHSCHHHHHHHHHHHHHHHHHHTCEEEEECC---------CCCHHHH-------
T ss_pred CHHHHHhHHHHHHHCCEEEECchHhhhhcCHHHHHHHHHHHHHHHHHcCCCEEEechhhHhhccCCCccHHHH-------
Confidence 999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred hhhHHHHHHhCccEEeeCCcchHH-----HHHHHHHHHHHHhhhhhhhHHHHHHhhhcCCCCCChhhHHHHHHHHHHHhc
Q psy6272 363 MNDVNSIVQDGADVVVLTQSEQAH-----HRVDILKEILKKTESVLWEKQVFEDLCALACPPLDPAHSIVIACVNAALKC 437 (547)
Q Consensus 363 ~~Dv~nav~~g~D~vmLsk~Eta~-----eaV~~m~~I~~~aE~~~~~~~~f~~~~~~~~~~~~~~~~ia~aav~~a~~~ 437 (547)
+||||||+||+||+||| ||||. |||++|++||+++|++++|...|.... ...+..+++|.+|+++|+++
T Consensus 296 -sDVanAV~dG~DavMLS-gETA~G~yPveaV~~m~~I~~~~E~~~~~~~~~~~~~----~~~~~~~aia~aa~~~a~~l 369 (470)
T 1e0t_A 296 -GDVANAILDGTDAVMLS-GESAKGKYPLEAVSIMATICERTDRVMNSRLEFNNDN----RKLRITEAVCRGAVETAEKL 369 (470)
T ss_dssp -HHHHHHHHHTCSEEEEC-CC------CHHHHHHHHHHHHHHHTTCCCCCC-------------CHHHHHHHHHHHHHHT
T ss_pred -hhhhHhhhcCccEEEec-ccccCCCCHHHHHHHHHHHHHHHHhhhhhhHHHhhhc----cccchHHHHHHHHHHHHHhc
Confidence 99999999999999999 99999 999999999999999866544443221 12356899999999999999
Q ss_pred CCcEEEEEcCCchHHHHHHhcCCCCCEEEEeCchhccccccccccceEEeecCCCCCCCCCCHHHHHHHHHHHHHHcCCC
Q psy6272 438 QAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRNPQADWSMDVDCRVQFAIQHGMEIGII 517 (547)
Q Consensus 438 ~a~aIvv~T~sG~tA~~isk~RP~~pIiavt~~~~~ar~l~l~~GV~p~~~~~~~~~~~~~d~d~~I~~a~~~~k~~g~~ 517 (547)
+|+|||+||.||+||+++|||||+|||||+|++++++|||+|+|||+|+++.. ..+.|.++++++++++++|++
T Consensus 370 ~a~aIv~~T~sG~ta~~isr~RP~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~------~~~~~~~~~~a~~~~~~~g~~ 443 (470)
T 1e0t_A 370 DAPLIVVATQGGKSARAVRKYFPDATILALTTNEKTAHQLVLSKGVVPQLVKE------ITSTDDFYRLGKELALQSGLA 443 (470)
T ss_dssp TCSBEEEECSSSHHHHHHHTTCCSSBEEEEESCHHHHHHGGGSTTEEEEECSC------CCSHHHHHHHHHHHHHHTSSS
T ss_pred CCCEEEEECCChhHHHHHHhhCCCCCEEEECCCHHHHHHhhhhccceEEEecC------CCCHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999999999999999999999999999999999864 378999999999999999999
Q ss_pred CCCCeEEEEecccCC-CCCCcEEEEEEe
Q psy6272 518 SPGDPLVLINGWRKG-AGFTNIMRVVYA 544 (547)
Q Consensus 518 ~~Gd~vvvv~g~~~g-~g~tntirv~~v 544 (547)
++||.||+++|++ | +|+||+|||+.+
T Consensus 444 ~~GD~vvv~~g~~-~~~g~tn~~~v~~v 470 (470)
T 1e0t_A 444 HKGDVVVMVSGAL-VPSGTTNTASVHVL 470 (470)
T ss_dssp CTTCEEEEEECSS-SCTTCCCEEEEEEC
T ss_pred CCcCEEEEEeCCC-CCCCccceEEEEEC
Confidence 9999999999999 6 899999999875
No 8
>1a3w_A Pyruvate kinase; allosteric regulation, tranferase, transfer; HET: FBP; 3.00A {Saccharomyces cerevisiae} SCOP: b.58.1.1 c.1.12.1 c.49.1.1 PDB: 1a3x_A
Probab=100.00 E-value=3.1e-125 Score=1021.38 Aligned_cols=484 Identities=28% Similarity=0.502 Sum_probs=452.0
Q ss_pred hHHHhhhhcCCCCCCCCCCCceEEEecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHHHHHHhccccc
Q psy6272 35 RYLNHLEQLNLDSPVRGVNLTNIMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKLAIEEVSLEEC 113 (547)
Q Consensus 35 ~~l~h~~~l~i~~~~~~~r~tkIi~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~a~~~~~~~~~ 113 (547)
++|+|+|.|+++++ ..+|+|||||||||+|+++++|++|+++|||||||| |||++++|.+ +++++|++++++
T Consensus 2 ~~~~~~~~~~~~~~-~~~r~tkIv~TlGPas~~~e~l~~li~aGm~v~RlNfSHg~~e~h~~-~i~~ir~~~~~~----- 74 (500)
T 1a3w_A 2 SRLERLTSLNVVAG-SDLRRTSIIGTIGPKTNNPETLVALRKAGLNIVRMNFSHGSYEYHKS-VIDNARKSEELY----- 74 (500)
T ss_dssp CHHHHHHCC------CCCCCSBCCEECCGGGCSHHHHHHHHHHTCCSEECBTTSCCHHHHHH-HHHHHHHHHHHC-----
T ss_pred chhhhhhhcCcccc-ccCCCcEEEEEcCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHH-HHHHHHHHHHHc-----
Confidence 56899999999986 567999999999999999999999999999999999 9999999999 999999999987
Q ss_pred cc-eeeEEEEecCCCeeeeeccCCCCccCCCCCcccEEEecCCEEEEeeccccccCCCccEEEecCCCcccccCCCCEEE
Q psy6272 114 KV-VTCAVAIETKGTQLRTGKLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVY 192 (547)
Q Consensus 114 ~~-~~i~I~~Dl~GpkiRtG~l~~p~~~~~~~~~~~i~L~~G~~v~lt~~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~ 192 (547)
+ +||+|++||+|||||||.|. ++ .+++|++||+++||++..|...|+.+.++|||++|+++|++||+||
T Consensus 75 -~~~~v~il~Dl~GPkiR~g~~~-------~~--~~v~l~~G~~~~lt~~~~~~~~g~~~~v~v~y~~l~~~v~~Gd~il 144 (500)
T 1a3w_A 75 -PGRPLAIALDTKGPEIRTGTTT-------ND--VDYPIPPNHEMIFTTDDKYAKACDDKIMYVDYKNITKVISAGRIIY 144 (500)
T ss_dssp -CSSCCCCEEECCCSCCBBCCCS-------SS--SCCCCCSSCEEEEECSSTTTTTCCSSCEEBSCTTHHHHCCTTCEEE
T ss_pred -CCcceEEEEeCCCCEEEEeecC-------CC--CceEeecCCEEEEEeCCcccCCCCCcEEEechHHHHhhcCCCCEEE
Confidence 6 89999999999999999997 43 2699999999999998755456888999999999999999999999
Q ss_pred Eec-eeEEEEEEE-eCCeEEEEEEeCcEeCCCceeeeCCCCcCCCCCChhhHHHHHHHHHcCCcEEEEcccCChhhHHHH
Q psy6272 193 IDR-NIKLKVVEK-ENNDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVVDLIVREAVDIIIMSSVTGANSIREM 270 (547)
Q Consensus 193 idD-~I~l~V~~v-~~~~v~~~V~~gG~L~s~Kginlp~~~~~lp~lt~~D~~di~~~~~~g~d~I~~sfV~sa~di~~~ 270 (547)
||| +|.|+|.++ +++.+.|+|++||.|+++||||+||+.+++|+||++|.+||+|++++|+|+|++|||++++|++++
T Consensus 145 idDG~i~l~V~~~~~~~~v~~~v~~gG~L~~~KgvNlPg~~~~lp~lt~~D~~DI~~~l~~g~d~I~lpfV~saeDv~~~ 224 (500)
T 1a3w_A 145 VDDGVLSFQVLEVVDDKTLKVKALNAGKICSHKGVNLPGTDVDLPALSEKDKEDLRFGVKNGVHMVFASFIRTANDVLTI 224 (500)
T ss_dssp ETTTTEEEECCBCCC--CEEEEBCSCCCCCSSCBEECTTCCCCCCSSCHHHHHHHHHHHHHTCSEEEECSCCSHHHHHHH
T ss_pred EeCCEEEEEEEEEccCCeEEEEEecCCEEeCCCCCcCCCCccCCCCCChhHHHHHHHHHHcCCCEEEECCCCCHHHHHHH
Confidence 999 999999999 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCC--
Q psy6272 271 RGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILP-- 348 (547)
Q Consensus 271 r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le-- 348 (547)
++++.+.+.++.||+||||++|++|+|||++++|||||||||||+|+|.++++.+|++|+++|+++|||||+||||||
T Consensus 225 ~~~l~~~~~~i~IiakIEt~eav~nldeI~~~~DgImvgrgDLgvelg~~~v~~aqk~ii~aaraaGkpvi~ATQMLeSM 304 (500)
T 1a3w_A 225 REVLGEQGKDVKIIVKIENQQGVNNFDEILKVTDGVMVARGDLGIEIPAPEVLAVQKKLIAKSNLAGKPVICATQMLESM 304 (500)
T ss_dssp HHHHHHHHTTSEEEEEECSSHHHHSHHHHHHHSSEEEECHHHHHHHTTGGGHHHHHHHHHHHHHHHTCCEEECSSTTGGG
T ss_pred HHHHHhcCCCcEEEEEECChHHHHhHHHHHHhCCEEEECchHhhhhcCcHHHHHHHHHHHHHHHhcCCCEEEEeehhhhh
Confidence 999998888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ----CCCcccccccCccchhhHHHHHHhCccEEeeCCcchHH-----HHHHHHHHHHHHhhhhhhhHHHHHHhhhcCCCC
Q psy6272 349 ----DHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAH-----HRVDILKEILKKTESVLWEKQVFEDLCALACPP 419 (547)
Q Consensus 349 ----~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~-----eaV~~m~~I~~~aE~~~~~~~~f~~~~~~~~~~ 419 (547)
+|||||+ +|++|++++|+|++||| +||+. |||++|++||+++|+.++|...|.......+.+
T Consensus 305 i~~~~ptraEv--------sdva~av~~G~d~vmLs-~eta~G~yPveaV~~m~~I~~~aE~~~~~~~~~~~~~~~~~~~ 375 (500)
T 1a3w_A 305 TYNPRPTRAEV--------SDVGNAILDGADCVMLS-GETAKGNYPINAVTTMAETAVIAEQAIAYLPNYDDMRNCTPKP 375 (500)
T ss_dssp GSCSSCCHHHH--------HHHHHHHHHTCSEECBS-TTTTTCSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTSCCSS
T ss_pred ccCCCchHHHH--------HHHHHHHHhCCCEEEec-chhhcchhHHHHHHHHHHHHHHhhhhhhhhhHHHhhhhccccc
Confidence 9999999 99999999999999999 99999 999999999999999877766666543212223
Q ss_pred CChhhHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCCCCCEEEEeCchhccccccccccceEEeecCCCCCCCCCC
Q psy6272 420 LDPAHSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRNPQADWSMD 499 (547)
Q Consensus 420 ~~~~~~ia~aav~~a~~~~a~aIvv~T~sG~tA~~isk~RP~~pIiavt~~~~~ar~l~l~~GV~p~~~~~~~~~~~~~d 499 (547)
.+..++||.+|+++|++++|+|||+||.||+||+++|||||+|||||+|++++++|||+|+|||+|+++......+|..+
T Consensus 376 ~~~~~aia~aa~~~a~~~~a~aIv~~T~sG~ta~~isr~RP~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~~~~~~~~~~ 455 (500)
T 1a3w_A 376 TSTTETVAASAVAAVFEQKAKAIIVLSTSGTTPRLVSKYRPNCPIILVTRCPRAARFSHLYRGVFPFVFEKEPVSDWTDD 455 (500)
T ss_dssp CCHHHHHHHHHHHHHHHHTCSCEEEECSSSHHHHHHHHTCCSSCEEEEESCTTHHHHGGGSTTEEEEECCSCCCSCTTTH
T ss_pred cchHHHHHHHHHHHHHhcCCCEEEEECCCchHHHHHHhhCCCCCEEEEcCCHHHHHhhhhhCCeEEEEecccccccccCC
Confidence 46789999999999999999999999999999999999999999999999999999999999999999987666789999
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCeEEEEecccCCCCCCcEEEEEEe
Q psy6272 500 VDCRVQFAIQHGMEIGIISPGDPLVLINGWRKGAGFTNIMRVVYA 544 (547)
Q Consensus 500 ~d~~I~~a~~~~k~~g~~~~Gd~vvvv~g~~~g~g~tntirv~~v 544 (547)
.+.++++|+++++++|++++||.||+++|++.|+|+||+|||+++
T Consensus 456 ~~~~~~~a~~~~~~~g~~~~GD~vvv~~g~~~~~g~tn~~~v~~v 500 (500)
T 1a3w_A 456 VEARINFGIEKAKEFGILKKGDTYVSIQGFKAGAGHSNTLQVSTV 500 (500)
T ss_dssp HHHHHHHHHHHHHHTTCSCTTCEEEEEECCCTTTCCCCEEEEEEC
T ss_pred HHHHHHHHHHHHHHCCCCCCcCEEEEEecccCCCCCCceEEEEEC
Confidence 999999999999999999999999999999988999999999875
No 9
>2e28_A Pyruvate kinase, PK; allosteric, transferase; 2.40A {Geobacillus stearothermophilus}
Probab=100.00 E-value=8.1e-122 Score=1012.34 Aligned_cols=456 Identities=28% Similarity=0.433 Sum_probs=433.0
Q ss_pred CCCceEEEecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHHHHHHhccccccceeeEEEEecCCCeee
Q psy6272 52 VNLTNIMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKLAIEEVSLEECKVVTCAVAIETKGTQLR 130 (547)
Q Consensus 52 ~r~tkIi~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~a~~~~~~~~~~~~~i~I~~Dl~GpkiR 130 (547)
+|+|||||||||+|+++++|++|+++|||||||| |||++++|.+ +++++|++++++ ++||+|++||+|||||
T Consensus 2 ~r~tkIv~TiGPas~~~~~l~~l~~aGm~v~RlNfsHg~~~~h~~-~i~~ir~~~~~~------~~~v~il~Dl~GPkiR 74 (587)
T 2e28_A 2 KRKTKIVSTIGPASESVDKLVQLMEAGMNVARLNFSHGDHEEHGR-RIANIREAAKRT------GRTVAILLDTKGPEIR 74 (587)
T ss_dssp CCCSEEEEECCTTTCSHHHHHHHHHHTEEEEEEETTSSCHHHHHH-HHHHHHHHHHHT------TCCCEEEEECCCCCCB
T ss_pred CCCceEEEECCCCcCCHHHHHHHHHcCCCEEEEECCCCCHHHHHH-HHHHHHHHHHHh------CCceEEEEeCCCCEEE
Confidence 6899999999999999999999999999999999 9999999999 999999999987 7999999999999999
Q ss_pred eeccCCCCccCCCCCcccEEEecCCEEEEeeccccccCCCccEEEecCCCcccccCCCCEEEEec-eeEEEEEEE--eCC
Q psy6272 131 TGKLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVYIDR-NIKLKVVEK--ENN 207 (547)
Q Consensus 131 tG~l~~p~~~~~~~~~~~i~L~~G~~v~lt~~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idD-~I~l~V~~v--~~~ 207 (547)
||.+. ++ +++|++||+++||.+. ..|+.+.++|+|++|+++|++||+||+|| +|.|+|.++ +++
T Consensus 75 ~g~~~-------~~---~i~l~~G~~~~l~~~~---~~g~~~~i~v~y~~l~~~v~~G~~ilidDG~i~l~V~~~~~~~~ 141 (587)
T 2e28_A 75 THNME-------NG---AIELKEGSKLVISMSE---VLGTPEKISVTYPSLIDDVSVGAKILLDDGLISLEVNAVDKQAG 141 (587)
T ss_dssp BCCCT-------TS---CBCCCSSCEEEEESSC---CCCCSSEEEBSCTTSTTTCCTTCEEEETTTTEEEEEEEEETTTT
T ss_pred EeccC-------CC---cEEEecCCEEEEEecC---cCCCCCEEecchHHHHhhcCCCCEEEEeCCEEEEEEEEEecCCC
Confidence 99998 44 6999999999999975 35788899999999999999999999999 999999999 889
Q ss_pred eEEEEEEeCcEeCCCceeeeCCCCcCCCCCChhhHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCC-CceEEEE
Q psy6272 208 DVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVD-RVLILAK 286 (547)
Q Consensus 208 ~v~~~V~~gG~L~s~Kginlp~~~~~lp~lt~~D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~-~i~Iiak 286 (547)
.+.|+|++||.|+|+|||||||+.+++|+||++|..||+|++++|+|+|++|||++++|++++++++++.|. ++.||||
T Consensus 142 ~i~~~v~~gg~l~~~KgvnlPg~~~~lp~ltekD~~di~~~l~~g~d~v~~sfV~~a~dv~~~~~~l~~~~~~~~~iiak 221 (587)
T 2e28_A 142 EIVTTVLNGGVLKNKKGVNVPGVKVNLPGITEKDRADILFGIRQGIDFIAASFVRRASDVLEIRELLEAHDALHIQIIAK 221 (587)
T ss_dssp EEEEECCSCCCBCSSCBEECTTSCCCCCSCCHHHHHHHHHHHHHTCSEEEESSCCSHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred eEEEEEecCCEEcCCceeecCCCcCCCCCCCcccHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999999884 8999999
Q ss_pred ecCHHHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCC------CCCcccccccCc
Q psy6272 287 IETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILP------DHNVEEYSDVSI 360 (547)
Q Consensus 287 IEt~~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le------~PtraE~~~~~~ 360 (547)
||+++|++|||||++++|||||||||||+|+|+++|+.+||+|+++|+++|||||+|||||| +|||||+
T Consensus 222 IE~~eav~nldeIl~~~DgImVargDLgvei~~~~v~~~qk~ii~~~~~~gkpvi~ATQmLeSMi~~p~PTRAE~----- 296 (587)
T 2e28_A 222 IENEEGVANIDEILEAADGLMVARGDLGVEIPAEEVPLIQKLLIKKSNMLGKPVITATQMLDSMQRNPRPTRAEA----- 296 (587)
T ss_dssp ECSHHHHHTHHHHHHHSSEEEEEHHHHHHHSCGGGHHHHHHHHHHHHHHHTCCEEEESSSSGGGGTCSSCCHHHH-----
T ss_pred ECCHHHHHhHHHHHHhCCEEEEcCchhhhhcCHHHHHHHHHHHHHHHHHcCCCeEEechhhHhhccCCCccHHHH-----
Confidence 99999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred cchhhHHHHHHhCccEEeeCCcchHH-----HHHHHHHHHHHHhhhhhhhHHHHHHhhhcCCCCCChhhHHHHHHHHHHH
Q psy6272 361 GDMNDVNSIVQDGADVVVLTQSEQAH-----HRVDILKEILKKTESVLWEKQVFEDLCALACPPLDPAHSIVIACVNAAL 435 (547)
Q Consensus 361 ~~~~Dv~nav~~g~D~vmLsk~Eta~-----eaV~~m~~I~~~aE~~~~~~~~f~~~~~~~~~~~~~~~~ia~aav~~a~ 435 (547)
+||||||+||+||+||| ||||. |||++|++||+++|++++|+..|..... ..+.+..+++|.+|+++|+
T Consensus 297 ---sDvanav~dG~DavMLS-gETA~G~yPveaV~~m~~I~~~~E~~~~~~~~~~~~~~--~~~~~~~~aia~aa~~~a~ 370 (587)
T 2e28_A 297 ---SDVANAIFDGTDAVMLS-GETAAGQYPVEAVKTMHQIALRTEQALEHRDILSQRTK--ESQTTITDAIGQSVAHTAL 370 (587)
T ss_dssp ---HHHHHHHHHTCSEEEES-HHHHTCSCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHT--TCCCCHHHHHHHHHHHHHH
T ss_pred ---hccchhhhhCcceeeec-ccccCCCCHHHHHHHHHHHHHHHhhhhhhhhHhhhhhc--ccccchHHHHHHHHHHHHH
Confidence 99999999999999999 99999 9999999999999998766555554321 1224678999999999999
Q ss_pred hcCCcEEEEEcCCchHHHHHHhcCCCCCEEEEeCchhccccccccccceEEeecCCCCCCCCCCHHHHHHHHHHHHHHcC
Q psy6272 436 KCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRNPQADWSMDVDCRVQFAIQHGMEIG 515 (547)
Q Consensus 436 ~~~a~aIvv~T~sG~tA~~isk~RP~~pIiavt~~~~~ar~l~l~~GV~p~~~~~~~~~~~~~d~d~~I~~a~~~~k~~g 515 (547)
+++|+|||+||.||+||+++|||||+|||||+|++++++|||+|+|||+|+++.. ..+.+.+++++++++++.|
T Consensus 371 ~~~a~aIv~~T~sG~ta~~isr~Rp~~pI~a~t~~~~~~r~l~l~~GV~p~~~~~------~~~~~~~~~~a~~~~~~~G 444 (587)
T 2e28_A 371 NLDVAAIVTPTVSGKTPQMVAKYRPKAPIIAVTSNEAVSRRLALVWGVYTKEAPH------VNTTDEMLDVAVDAAVRSG 444 (587)
T ss_dssp HTTCSEEEEECSSSHHHHHHHHTCCSSCEEEEESSHHHHHHGGGSTTEEEEECCC------CCSHHHHHHHHHHHHHHHT
T ss_pred hCCCCEEEEECCCcHHHHHHHhcCCCCCEEEECCCHHHHHHHHHhcCceEEeccc------cCCHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999999864 3788999999999999999
Q ss_pred CCCCCCeEEEEecccCC-CCCCcEEEEEEe
Q psy6272 516 IISPGDPLVLINGWRKG-AGFTNIMRVVYA 544 (547)
Q Consensus 516 ~~~~Gd~vvvv~g~~~g-~g~tntirv~~v 544 (547)
|+++||.|++++|++.+ .|.||++|++.+
T Consensus 445 ~~k~GD~VVItqG~P~g~~G~TN~LkI~~V 474 (587)
T 2e28_A 445 LVKHGDLVVITAGVPVGETGSTNLMKVHVI 474 (587)
T ss_dssp CCCTTCEEEEEECSSCSSCCCCCEEEEEEC
T ss_pred cccccceEEEecCcccCcCCCCceEEEEEE
Confidence 99999999999999977 789999999875
No 10
>3qtg_A Pyruvate kinase, PK; TIM barrel, glycolysis, transferase; 2.20A {Pyrobaculum aerophilum}
Probab=100.00 E-value=1.1e-120 Score=971.91 Aligned_cols=431 Identities=21% Similarity=0.255 Sum_probs=410.4
Q ss_pred CCCCceEEEecCCCCCCHH--HHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHHHHHHhccccccceeeEEEEecCCC
Q psy6272 51 GVNLTNIMATVGENNNSVD--LIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKLAIEEVSLEECKVVTCAVAIETKGT 127 (547)
Q Consensus 51 ~~r~tkIi~TiGpas~~~e--~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~a~~~~~~~~~~~~~i~I~~Dl~Gp 127 (547)
++|+|||||||||+|+++| +|++|+++ ||||||| |||++|+|.+ +|+++|++++++ ++|++|++||+||
T Consensus 13 ~~r~TKIv~TiGPas~~~e~~~l~~li~a-mnv~RlNfSHg~~e~h~~-~i~~iR~~~~~~------g~~vaIl~Dl~GP 84 (461)
T 3qtg_A 13 ARNLTKRVATLGPSTDVLRPDELIKFLDL-VDGVRINLAHASPNEVKF-RIEAVRSYEKAK------NRPLAVIVDLKGP 84 (461)
T ss_dssp CSCSSEEEEECSHHHHTCCHHHHHHHHTT-CSEEEEETTTCCHHHHHH-HHHHHHHHHHHH------TCCCEEEEECCCC
T ss_pred ccCCceEEEeeCCCccCchHHHHHHHHHh-CCEEEEECCCCCHHHHHH-HHHHHHHHHHHc------CCceEEEEeCCCC
Confidence 5799999999999999999 99999999 9999999 9999999999 999999999987 7999999999999
Q ss_pred eeeeeccCCCCccCCCCCcccEEEecCCEEEEeeccccccCCCccEEEecCCCcccccCCCCEEEEec-eeEEEEEEEeC
Q psy6272 128 QLRTGKLSRPSNVGHGDNSYSVEIAQGANIVLTANQLIETKGTVKRLFVDSMELPKRVIPDDIVYIDR-NIKLKVVEKEN 206 (547)
Q Consensus 128 kiRtG~l~~p~~~~~~~~~~~i~L~~G~~v~lt~~~~~~~~~~~~~i~v~~~~~~~~v~~Gd~I~idD-~I~l~V~~v~~ 206 (547)
|||||.+. .++|++||+|+||+++.+ ++ +.++++|++|+++|++||+||+|| +|.|+|.++++
T Consensus 85 kIR~g~~~------------~v~L~~G~~~~lt~~~~~---~~-~~i~v~y~~l~~~v~~G~~IlidDG~i~l~V~~~~~ 148 (461)
T 3qtg_A 85 SIRVGSTS------------PINVQEGEVVKFKLSDKS---DG-TYIPVPNKAFFSAVEQNDVILMLDGRLRLKVTNTGS 148 (461)
T ss_dssp CCBCCBCS------------CEEECTTCEEEEEECSBC---CS-SSEEECCHHHHHHCCTTCEEEEGGGTEEEEEEEECS
T ss_pred EEEECCCC------------CEEEeCCCEEEEEecCCC---CC-cEEEcchHHHHhhcCCCCEEEEeCCEEEEEEEEEEC
Confidence 99999997 499999999999998754 34 689999999999999999999999 99999999999
Q ss_pred CeEEEEEEeCcEeCCCceeeeCCCCcCCCCCChhhHHHHH--HHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEE
Q psy6272 207 NDVHCTVIRGGKLMDNQLVTVPRVTFNLPVIADRDKHVVD--LIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLIL 284 (547)
Q Consensus 207 ~~v~~~V~~gG~L~s~Kginlp~~~~~lp~lt~~D~~di~--~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~Ii 284 (547)
+.+.|+|++||.|+++||||+||+.+++|+||++|++||+ |++++|+|+|++|||++++|++++|++|++.|.+++||
T Consensus 149 ~~v~~~V~~gG~L~~~KgvNlPg~~~~lp~lTekD~~dl~~~~~~~~~vD~Ia~SfVr~a~Dv~~~r~~l~~~g~~~~ii 228 (461)
T 3qtg_A 149 DWIEAVAESSGVITGGKAIVVEGKDYDISTPAEEDVEALKAISPIRDNIDYVAISLAKSCKDVDSVRSLLTELGFQSQVA 228 (461)
T ss_dssp SEEEEEESSCEEECTTCBEEETTCCCCCCSSCHHHHHHHHHHGGGGGGCCEEEECSCCSHHHHHHHHHHHHHTTCCCEEE
T ss_pred CEEEEEEEECCEecCCCceecCCCCCCCCCCCHHHHHHHHHHHHhhcCCCEEEecCCCCHHHHHHHHHHHHhcCCCceEE
Confidence 9999999999999999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred EEecCHHHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCC------CCCccccccc
Q psy6272 285 AKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILP------DHNVEEYSDV 358 (547)
Q Consensus 285 akIEt~~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le------~PtraE~~~~ 358 (547)
|||||++|++|||||++++|||||||||||+|+|+++|+.+||+|+++|+++|||||+|||||| +|||||+
T Consensus 229 aKIE~~eav~nldeIl~~sDgImVaRGDLgvei~~e~v~~~Qk~ii~~~~~~gkpvi~ATQMLeSMi~~p~PTRAEv--- 305 (461)
T 3qtg_A 229 VKIETKGAVNNLEELVQCSDYVVVARGDLGLHYGLDALPIVQRRIVHTSLKYGKPIAVATQLLDSMQSSPIPTRAEI--- 305 (461)
T ss_dssp EEECSHHHHHTHHHHHHTCSEEEEEHHHHTTTSCTTTHHHHHHHHHHHHHHTTCCEEEESSSSGGGGTCSSCCHHHH---
T ss_pred EEECCHHHHHhHHHHHHhcccEEEccccccccCCHHHHHHHHHHHHHHHHHhCCCEEEeccchHhhccCCCccHHHH---
Confidence 9999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CccchhhHHHHHHhCccEEeeCCcchHH-----HHHHHHHHHHHHhhhhhhhHHHHHHhhhcCCCCCChhhHHHHHHHHH
Q psy6272 359 SIGDMNDVNSIVQDGADVVVLTQSEQAH-----HRVDILKEILKKTESVLWEKQVFEDLCALACPPLDPAHSIVIACVNA 433 (547)
Q Consensus 359 ~~~~~~Dv~nav~~g~D~vmLsk~Eta~-----eaV~~m~~I~~~aE~~~~~~~~f~~~~~~~~~~~~~~~~ia~aav~~ 433 (547)
+||||||+||+||+||| ||||. |||++|++||+++|+++.+ | +.+.+..+++|.+|+++
T Consensus 306 -----sDVanAV~dGaDavMLS-gETA~G~yPveaV~~m~~I~~~aE~~~~~---~-------~~~~~~~~aia~aa~~~ 369 (461)
T 3qtg_A 306 -----NDVFTTASMGVDSLWLT-NETASGKYPLAAVSWLSRILMNVEYQIPQ---S-------PLLQNSRDRFAKGLVEL 369 (461)
T ss_dssp -----HHHHHHHHTTCSEEEEC-HHHHTSSCHHHHHHHHHHHHHTCCCCCCC---C-------CCCCSHHHHHHHHHHHH
T ss_pred -----HHHHHHHHhCCcEEEEc-ccccCCCCHHHHHHHHHHHHHHHHhhhhh---c-------cCCCCHHHHHHHHHHHH
Confidence 99999999999999999 99998 9999999999999998654 1 24567899999999999
Q ss_pred HHhcCCcEEEEEcCCchHHHHHHhcCCCCCEEEEeCchhccccccccccceEEeecCCCCCCCCCCHHHHHHHHHHHHHH
Q psy6272 434 ALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRNPQADWSMDVDCRVQFAIQHGME 513 (547)
Q Consensus 434 a~~~~a~aIvv~T~sG~tA~~isk~RP~~pIiavt~~~~~ar~l~l~~GV~p~~~~~~~~~~~~~d~d~~I~~a~~~~k~ 513 (547)
|++++|+ ||+||.||+||+++|||||+|||||+|++++++|||+|+|||+|++++ . .+.|++++.|++++++
T Consensus 370 a~~~~a~-Iv~~T~SG~tA~~vsr~RP~~pIia~T~~~~~~r~l~l~~GV~p~~~~-~------~~~d~~~~~a~~~~~~ 441 (461)
T 3qtg_A 370 AQDLGAN-ILVFSMSGTLARRIAKFRPRGVVYVGTPNVRVARSLSIVWALEPLYIP-A------ENYEEGLEKLISLKGT 441 (461)
T ss_dssp HHHHTCE-EEEECSSSHHHHHHHTTCCSSCEEEEESCHHHHHHHTTSTTEEEEECC-C------SSHHHHHHHHHHHHCC
T ss_pred HHhcCCC-EEEECCCcHHHHHHHhhCCCCCEEEeCCCHHHHhhceeccceEEEEeC-C------CCHHHHHHHHHHHHHH
Confidence 9999999 999999999999999999999999999999999999999999999986 2 6789999999999998
Q ss_pred cCCCCCCCeEEEEecccCCCCCCcEEEEE
Q psy6272 514 IGIISPGDPLVLINGWRKGAGFTNIMRVV 542 (547)
Q Consensus 514 ~g~~~~Gd~vvvv~g~~~g~g~tntirv~ 542 (547)
+| ||++.|.+ |+||+|||+
T Consensus 442 ~g-------vvit~g~p---~~TN~~~v~ 460 (461)
T 3qtg_A 442 TP-------FVATYGIR---GGVHSVKVK 460 (461)
T ss_dssp SS-------EEEEECCT---TSCCEEEEE
T ss_pred CC-------EEEEeccC---CCCeEEEEE
Confidence 88 55555554 589999996
No 11
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=99.78 E-value=7.8e-19 Score=182.72 Aligned_cols=143 Identities=15% Similarity=0.174 Sum_probs=126.4
Q ss_pred HHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhc--------------------------------CCCceEEEEecCH
Q psy6272 243 HVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDH--------------------------------VDRVLILAKIETL 290 (547)
Q Consensus 243 ~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~--------------------------------~~~i~IiakIEt~ 290 (547)
.+|+++++.|+++|++|||+|++|++++++++... +.++.|+++|||+
T Consensus 108 ~di~~~LdaGa~gImlP~V~saee~~~~~~~~~~~p~g~Rg~~~~a~~~G~~~~~~~~~~~~y~~~a~~~i~vi~mIEt~ 187 (339)
T 1izc_A 108 VSLSTALDAGAAGIVIPHVETVEEVREFVKEMYYGPIGRRSFSPWTFSPGIADASLFPNDPYNVATSNNHVCIIPQIESV 187 (339)
T ss_dssp HHHHHHHHHTCSEEEETTCCCHHHHHHHHHHHSCTTTCCCCCCSTTCBTTTBCCCSSTTCTTCHHHHHHHCEEEEEECSH
T ss_pred HHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCcccccchhhcccccccccccchhhhhhhcCcCceEEEEEChH
Confidence 68999999999999999999999999999988531 1247899999999
Q ss_pred HHHhhHHHHHhh--cCEEEEcCCccccc--------CCh---HHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccc
Q psy6272 291 LGMEYMDEIIME--SDGVVLNRIQLAVA--------TSV---EVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSD 357 (547)
Q Consensus 291 ~av~nldeIl~~--~DgImIargDLg~e--------~~~---e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~ 357 (547)
+|++|+++|+++ .|++|||++||+.+ +|. +.+..++++++.+|+++|||++..+. ..
T Consensus 188 ~av~nldeIaa~~~vD~l~iG~~DLs~~~~~~~~~~lG~~~~p~v~~a~~~iv~aaraaGk~~g~~~~--------d~-- 257 (339)
T 1izc_A 188 KGVENVDAIAAMPEIHGLMFGPGDYMIDAGLDLNGALSGVPHPTFVEAMTKFSTAAQRNGVPIFGGAL--------SV-- 257 (339)
T ss_dssp HHHHTHHHHHTCTTCCCEEECHHHHHHHTTCCTTCCTTSCCCHHHHHHHHHHHHHHHHTTCCEEEECS--------SG--
T ss_pred HHHHHHHHHhcCCCCCEEEECHHHHHhhhhcccchhhCCCCCHHHHHHHHHHHHHHHHhCCceeEecC--------CH--
Confidence 999999999975 79999999999999 887 78999999999999999999977543 23
Q ss_pred cCccchhhHHHHHHhCccEEeeCCcchHH------HHHHHHHHHHHHhhhh
Q psy6272 358 VSIGDMNDVNSIVQDGADVVVLTQSEQAH------HRVDILKEILKKTESV 402 (547)
Q Consensus 358 ~~~~~~~Dv~nav~~g~D~vmLsk~Eta~------eaV~~m~~I~~~aE~~ 402 (547)
.++.+++..|+|+++++ +++.. +.|+++++|+.++|.+
T Consensus 258 ------~~a~~~~~~Gf~~l~~~-~di~~l~~~~~~~v~~a~~iv~a~e~~ 301 (339)
T 1izc_A 258 ------DMVPSLIEQGYRAIAVQ-FDVWGLSRLVHGSLAQARASAKQFAGQ 301 (339)
T ss_dssp ------GGHHHHHHTTEEEEEEE-EHHHHHHHHHHHHHHHHHHHHGGGCC-
T ss_pred ------HHHHHHHHhCCCEEEec-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66788999999999999 88777 8899999999888875
No 12
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=99.73 E-value=7.5e-18 Score=171.63 Aligned_cols=130 Identities=17% Similarity=0.198 Sum_probs=110.7
Q ss_pred hhHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHH---------------------------hcCCCceEEEEecCHHH
Q psy6272 240 RDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLE---------------------------DHVDRVLILAKIETLLG 292 (547)
Q Consensus 240 ~D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~---------------------------~~~~~i~IiakIEt~~a 292 (547)
.|..+|+++++.|+++|++|||+|++|++++.+.+. ..+.++.++++|||++|
T Consensus 99 ~d~~di~~~ld~ga~~ImlP~V~saeea~~~~~~~~~~p~G~Rg~g~~~~ra~~~g~~~~y~~~~~~~~~vi~mIEt~~a 178 (287)
T 2v5j_A 99 NDPVQIKQLLDVGTQTLLVPMVQNADEAREAVRATRYPPAGIRGVGSALARASRWNRIPDYLQKANDQMCVLVQIETREA 178 (287)
T ss_dssp SCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHHTSCTTTSCCCGGGTTTGGGTTTTSTTHHHHHHHHCEEEEEECSHHH
T ss_pred CCHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHHhccCccCccccccchhhhhhccchhhhHhhcCCCcEEEEEECcHHH
Confidence 445589999999999999999999999999988652 12235889999999999
Q ss_pred HhhHHHHHhh--cCEEEEcCCcccccCCh------HHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchh
Q psy6272 293 MEYMDEIIME--SDGVVLNRIQLAVATSV------EVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMN 364 (547)
Q Consensus 293 v~nldeIl~~--~DgImIargDLg~e~~~------e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~ 364 (547)
++|++||+++ .|+++||++||+.++|. +.+..++++++.+|+++|||+++.+. +|.
T Consensus 179 v~n~deIaa~~~vD~l~iG~~DLs~~lg~~~~~~~p~v~~a~~~iv~aaraaG~~~gv~~~---d~~------------- 242 (287)
T 2v5j_A 179 MKNLPQILDVEGVDGVFIGPADLSADMGYAGNPQHPEVQAAIEQAIVQIRESGKAPGILIA---NEQ------------- 242 (287)
T ss_dssp HHTHHHHHTSTTEEEEEECHHHHHHHTTSTTCCCSHHHHHHHHHHHHHHHHTTSEEEEECC---CHH-------------
T ss_pred HHHHHHHhCcCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHcCCeeEEecC---CHH-------------
Confidence 9999999985 79999999999999996 68999999999999999999987543 333
Q ss_pred hHHHHHHhCccEEeeCCcchHH
Q psy6272 365 DVNSIVQDGADVVVLTQSEQAH 386 (547)
Q Consensus 365 Dv~nav~~g~D~vmLsk~Eta~ 386 (547)
.+..++..|++.+.++ .++..
T Consensus 243 ~a~~~~~~G~~~~s~~-~d~~~ 263 (287)
T 2v5j_A 243 LAKRYLELGALFVAVG-VDTTL 263 (287)
T ss_dssp HHHHHHHTTCSEEEEE-EHHHH
T ss_pred HHHHHHHhCCCEEEEC-cHHHH
Confidence 3345788999999999 77665
No 13
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=99.72 E-value=1.3e-17 Score=168.11 Aligned_cols=129 Identities=16% Similarity=0.200 Sum_probs=110.5
Q ss_pred hHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHh---------------------------cCCCceEEEEecCHHHH
Q psy6272 241 DKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLED---------------------------HVDRVLILAKIETLLGM 293 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~---------------------------~~~~i~IiakIEt~~av 293 (547)
|..+|+++++.|+|+|++|||+|++|++++.+.+.. .+.++.++++|||++|+
T Consensus 79 ~~~~i~~~l~~g~~~I~~P~V~s~ee~~~~~~~~~~~p~G~Rg~~~~~~~~~~~g~~~~y~~~~~~~~~v~~~IEt~~av 158 (267)
T 2vws_A 79 SKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSATRYPPYGERGVGASVARAARWGRIENYMAQVNDSLCLLVQVESKTAL 158 (267)
T ss_dssp CHHHHHHHHHTTCCEEEECCCCSHHHHHHHHHHTSCTTTSCCCSCGGGSGGGGGGTSTTHHHHHHHHCEEEEECCSHHHH
T ss_pred CHHHHHHHHHhCCCEEEeCCCCCHHHHHHHHHHHcCCCCCccccccchhhhhhcCcchhhhhhcccccEEEEEECCHHHH
Confidence 457899999999999999999999999999887631 12358899999999999
Q ss_pred hhHHHHHhh--cCEEEEcCCcccccCCh------HHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhh
Q psy6272 294 EYMDEIIME--SDGVVLNRIQLAVATSV------EVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMND 365 (547)
Q Consensus 294 ~nldeIl~~--~DgImIargDLg~e~~~------e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~D 365 (547)
+|++||+++ .|+++||++||+.++|. +.+..++++++.+|+++|||+++.+. +| ..
T Consensus 159 ~~~~eIa~~~gvd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~~v~~~---d~-------------~~ 222 (267)
T 2vws_A 159 DNLDEILDVEGIDGVFIGPADLSASLGYPDNAGHPEVQRIIETSIRRIRAAGKAAGFLAV---AP-------------DM 222 (267)
T ss_dssp HTHHHHHTSTTCCEEEECHHHHHHHTTCSSSCCTHHHHHHHHHHHHHHHHTTCEEEEECS---SH-------------HH
T ss_pred HHHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCeEEEecC---CH-------------HH
Confidence 999999988 89999999999999997 67999999999999999999987533 33 33
Q ss_pred HHHHHHhCccEEeeCCcchHH
Q psy6272 366 VNSIVQDGADVVVLTQSEQAH 386 (547)
Q Consensus 366 v~nav~~g~D~vmLsk~Eta~ 386 (547)
...++..|++.+.++ .++..
T Consensus 223 a~~~~~~G~~~~s~~-~d~~~ 242 (267)
T 2vws_A 223 AQQCLAWGANFVAVG-VDTML 242 (267)
T ss_dssp HHHHHHTTCCEEEEE-EHHHH
T ss_pred HHHHHHCCCCEEEEc-hHHHH
Confidence 455788999999998 77654
No 14
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=99.72 E-value=3.8e-17 Score=164.28 Aligned_cols=129 Identities=17% Similarity=0.278 Sum_probs=111.9
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHH---------------------------hcCCCceEEEEecCHHHHh
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLE---------------------------DHVDRVLILAKIETLLGME 294 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~---------------------------~~~~~i~IiakIEt~~av~ 294 (547)
..||+++++.|+|+|++|||+|++|++++.+.+. ..+.++.++++|||++|+.
T Consensus 78 ~~di~~~ld~G~~gI~lP~v~saed~~~~~~~~~~~p~G~Rg~~~~r~~~~g~~~~~~y~~~~~~~~~v~~mIEt~~av~ 157 (261)
T 3qz6_A 78 RAHVQRLLDIGAEGFMIPGVQSAETMRETVRLAKYPPLGERGVGGSIVTDFKPVNWAEWVQERNDEIFIMAQIEHVKAVE 157 (261)
T ss_dssp HHHHHHHHHHTCCEEEETTCCSHHHHHHHHHHHSCTTTCCCCCCCGGGGTTCCCCHHHHHHHHHTTCEEEEEECCHHHHH
T ss_pred HHHHHHHHhcCCCEEEECCcCCHHHHHHHHHHhccCCCCCcCcccchhhhccccchhhHHhcCCCCeEEEEEECCHHHHH
Confidence 3589999999999999999999999999988762 2245789999999999999
Q ss_pred hHHHHHhh--cCEEEEcCCcccccCCh------HHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhH
Q psy6272 295 YMDEIIME--SDGVVLNRIQLAVATSV------EVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDV 366 (547)
Q Consensus 295 nldeIl~~--~DgImIargDLg~e~~~------e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv 366 (547)
|++||+++ .|+++||++||+.++|. +.+..++++++.+|+++|||+++.+. +|..++
T Consensus 158 ~~~eIaa~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~aaG~~~g~~~~---~~~~~~------------ 222 (261)
T 3qz6_A 158 DIDSILAVQGVDAVIFGPRDLSNDLGIIGQTEHPKVYECYEKVYRAADRQGVVKGFFTA---ADAAKM------------ 222 (261)
T ss_dssp THHHHHTSTTCCEEEECHHHHHHHTTCTTCTTCHHHHHHHHHHHHHHHHHTCEEEEEES---SCGGGG------------
T ss_pred HHHHHhCCCCCCEEEECHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeC---CHHHHH------------
Confidence 99999955 79999999999999987 47999999999999999999998765 555440
Q ss_pred HHHHHhCccEEeeCCcchHH
Q psy6272 367 NSIVQDGADVVVLTQSEQAH 386 (547)
Q Consensus 367 ~nav~~g~D~vmLsk~Eta~ 386 (547)
...+..|++.+.++ .++..
T Consensus 223 ~~~~~~G~~~~s~~-~D~~~ 241 (261)
T 3qz6_A 223 GWAVERGAQMLLWS-GDVAA 241 (261)
T ss_dssp HHHHHTTCCEEEEE-EHHHH
T ss_pred HHHHHCCCCEEEEh-hHHHH
Confidence 23688999999999 88766
No 15
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=99.69 E-value=7.9e-17 Score=161.26 Aligned_cols=130 Identities=18% Similarity=0.222 Sum_probs=112.3
Q ss_pred hhHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHH--------------------------hcCCCceEEEEecCHHHH
Q psy6272 240 RDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLE--------------------------DHVDRVLILAKIETLLGM 293 (547)
Q Consensus 240 ~D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~--------------------------~~~~~i~IiakIEt~~av 293 (547)
.|..+|+++++.|+++|++|||+|++|++.+.+.+. ..+.++.++++|||++|+
T Consensus 79 ~~~~~i~~~l~~g~~gI~~P~V~s~~ev~~~~~~~~~~p~g~Rg~~~~~~~~~~g~~~~~~~~~~~~~~v~~~IEt~~av 158 (256)
T 1dxe_A 79 NEPVIIKRLLDIGFYNFLIPFVETKEEAELAVASTRYPPEGIRGVSVSHRANMFGTVADYFAQSNKNITILVQIESQQGV 158 (256)
T ss_dssp SCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHTTSCTTTCCCCCCSSSGGGGGGTSTTHHHHHTTSCEEEEEECSHHHH
T ss_pred CCHHHHHHHHhcCCceeeecCcCCHHHHHHHHHHhcCCCCCccCCCcchhhhhcCchHHHHHhcCcccEEEEEECCHHHH
Confidence 455669999999999999999999999999988774 124578999999999999
Q ss_pred hhHHHHHhh--cCEEEEcCCcccccCCh------HHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhh
Q psy6272 294 EYMDEIIME--SDGVVLNRIQLAVATSV------EVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMND 365 (547)
Q Consensus 294 ~nldeIl~~--~DgImIargDLg~e~~~------e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~D 365 (547)
.|+++|+++ .|+++||++||+.++|. +.+..++++++.+|+++|||+++.+. +| .+
T Consensus 159 ~~~~eIa~~~~vd~l~iG~~DL~~~lg~~~~~~~p~v~~a~~~iv~aa~a~G~~~~v~~~---d~-------------~~ 222 (256)
T 1dxe_A 159 DNVDAIAATEGVDGIFVGPSDLAAALGHLGNASHPDVQKAIQHIFNRASAHGKPSGILAP---VE-------------AD 222 (256)
T ss_dssp HTHHHHHTSTTCCEEEECHHHHHHHTTCTTCTTSHHHHHHHHHHHHHHHHTTCCEEEECC---SH-------------HH
T ss_pred HhHHHHhCCCCCCEEEEChHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCceEEecC---CH-------------HH
Confidence 999999984 79999999999999997 67999999999999999999987432 22 44
Q ss_pred HHHHHHhCccEEeeCCcchHH
Q psy6272 366 VNSIVQDGADVVVLTQSEQAH 386 (547)
Q Consensus 366 v~nav~~g~D~vmLsk~Eta~ 386 (547)
...++..|++.+.++ .++..
T Consensus 223 ~~~~~~~G~~~~s~~-~d~~~ 242 (256)
T 1dxe_A 223 ARRYLEWGATFVAVG-SDLGV 242 (256)
T ss_dssp HHHHHHTTCCEEEEE-EHHHH
T ss_pred HHHHHHcCCCEEEec-hHHHH
Confidence 556889999999999 87665
No 16
>1sgj_A Citrate lyase, beta subunit; trimer, TIM barrel, structural genomics, PSI, protein structure initiative; 1.84A {Deinococcus radiodurans} SCOP: c.1.12.5
Probab=99.58 E-value=3.6e-15 Score=151.17 Aligned_cols=142 Identities=13% Similarity=0.060 Sum_probs=113.2
Q ss_pred CCCCC-hhhHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh--cCEEEEcC
Q psy6272 234 LPVIA-DRDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME--SDGVVLNR 310 (547)
Q Consensus 234 lp~lt-~~D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~--~DgImIar 310 (547)
++.++ +++..||+.+++ |+|+|++|||++++|++.+++++...|.++.++++|||++|+.|+++|+.. .|++++|+
T Consensus 75 v~~~~~~~~~~dl~~~l~-g~~~i~lPkv~s~~~v~~~~~~l~~~g~~~~i~~~IEt~~av~~~~eIa~~~~vd~l~iG~ 153 (284)
T 1sgj_A 75 VNALHSPYFEDDLSVLTP-ELSGVVVPKLEMGAEARQVAQMLQERSLPLPILAGLETGAGVWNAREIMEVPEVAWAYFGA 153 (284)
T ss_dssp CCCTTSTTHHHHGGGCCT-TSSEEEECSCCSHHHHHHHHHHHHHTTCCCCEEEEECSHHHHHTHHHHHTSTTEEEEEECH
T ss_pred eCCCCCHhHHHHHHHHhc-cCCEEEeCCCCCHHHHHHHHHHHHhcCCCeEEEEEecCHHHHHHHHHHHcCCCCcEEEECH
Confidence 33444 568889999999 999999999999999999999998777789999999999999999999963 79999999
Q ss_pred CcccccCCh------HHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcch
Q psy6272 311 IQLAVATSV------EVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQ 384 (547)
Q Consensus 311 gDLg~e~~~------e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Et 384 (547)
+||+.++|. +.+..++++++.+|+++|||++.. - .....-.+ +-..+...+...|.|+-+.- ..+
T Consensus 154 ~DL~~~lg~~~~~~~~~~~~a~~~iv~aa~a~G~~~i~~-v-~~~~~d~~------~l~~~~~~~~~~Gf~Gk~~i-hP~ 224 (284)
T 1sgj_A 154 EDYTTDLGGKRTPGGLEVLYARSQVALAARLTGVAALDI-V-VTALNDPE------TFRADAEQGRALGYSGKLCI-HPA 224 (284)
T ss_dssp HHHHHHHTCCCCSSCGGGHHHHHHHHHHHHHHTCEEEEC-C-CCCCSCHH------HHHHHHHHHHHTTCSEEEES-SHH
T ss_pred HHHHHHhCCCCCCChHHHHHHHHHHHHHHHHcCCCeeeC-C-cCCCCCHH------HHHHHHHHHHhCCCCccccc-CHH
Confidence 999999998 679999999999999999999532 1 10110000 01144567888999966665 443
Q ss_pred H
Q psy6272 385 A 385 (547)
Q Consensus 385 a 385 (547)
-
T Consensus 225 q 225 (284)
T 1sgj_A 225 Q 225 (284)
T ss_dssp H
T ss_pred H
Confidence 3
No 17
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=99.40 E-value=7.6e-13 Score=136.90 Aligned_cols=140 Identities=14% Similarity=0.129 Sum_probs=114.5
Q ss_pred CCCCCChhhHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHh-----------cCCCceEEEEecCHHHHhhHHHHHh
Q psy6272 233 NLPVIADRDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLED-----------HVDRVLILAKIETLLGMEYMDEIIM 301 (547)
Q Consensus 233 ~lp~lt~~D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~-----------~~~~i~IiakIEt~~av~nldeIl~ 301 (547)
+-|.+-..|...|..+++.|.+.|++|||+|+++++.+++.+.+ .+.++.++++|||+.|+.|+|+|++
T Consensus 116 ~~p~~~~~ql~Ai~ra~~~G~~~ImvPmV~s~~E~~~a~~~v~~~~~~~r~~G~~~~~~~~vg~mIEtp~av~~~d~Ia~ 195 (324)
T 2xz9_A 116 DRPDIFKTQLRAILRASAYGNVQIMYPMISSVEEVRKANSILEEVKAELDREGVKYDKEIKVGIMVEIPSAAVTADILAK 195 (324)
T ss_dssp HCHHHHHHHHHHHHHHGGGSCEEEEECSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCTTCEEEEEECSHHHHHTHHHHTT
T ss_pred cchhhHHHHHHHHHHHHhCCCCEEEEcCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHH
Confidence 44566677888899999999999999999999999888887742 1246899999999999999999999
Q ss_pred hcCEEEEcCCcccc-cCC---------------hHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhh
Q psy6272 302 ESDGVVLNRIQLAV-ATS---------------VEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMND 365 (547)
Q Consensus 302 ~~DgImIargDLg~-e~~---------------~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~D 365 (547)
++|+++||..||+. .++ .+.|..+.++++.+|+++|||+++++++--+| ..
T Consensus 196 ~vD~~siGtnDLtq~~lg~dR~~~~~~~~~~~~~p~v~~ai~~vv~aar~aG~~vgvcge~~~dp-------------~~ 262 (324)
T 2xz9_A 196 EVDFFSIGTNDLTQYTLAVDRMNEHVKEYYQPFHPAILRLVKMVIDAAHKEGKFAAMCGEMAGDP-------------LA 262 (324)
T ss_dssp TCSEEEECHHHHHHHHTTCCTTCGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGGGGCH-------------HH
T ss_pred hCcEEEECHHHHHHHHhCCCCCcccccccCCCCCHHHHHHHHHHHHHHHHHCCceeecCccCCCH-------------HH
Confidence 99999999999995 334 26788899999999999999999876531011 44
Q ss_pred HHHHHHhCccEEeeCCcchHH
Q psy6272 366 VNSIVQDGADVVVLTQSEQAH 386 (547)
Q Consensus 366 v~nav~~g~D~vmLsk~Eta~ 386 (547)
+..++..|.|.+.++ .+...
T Consensus 263 ~~~l~~lG~~~~si~-p~~i~ 282 (324)
T 2xz9_A 263 AVILLGLGLDEFSMS-ATSIP 282 (324)
T ss_dssp HHHHHHHTCCEEEEC-GGGHH
T ss_pred HHHHHHCCCCEEEEC-hhHHH
Confidence 556788999998888 65444
No 18
>3qll_A Citrate lyase; beta barrel; 2.45A {Yersinia pestis}
Probab=99.20 E-value=7.9e-11 Score=121.42 Aligned_cols=141 Identities=13% Similarity=0.224 Sum_probs=109.6
Q ss_pred cCCCCC-ChhhHHHHHHHHHcCC--cEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh---cCE
Q psy6272 232 FNLPVI-ADRDKHVVDLIVREAV--DIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME---SDG 305 (547)
Q Consensus 232 ~~lp~l-t~~D~~di~~~~~~g~--d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~---~Dg 305 (547)
+.++.+ |++..+||+.+++.|+ |+|++|+|+++++++.+.+++...+.++.++++|||++|+.|+++|+.. .|+
T Consensus 106 VRVn~~~t~~~~~Dl~~~l~~g~~~~gIvlPKvesa~~v~~~~~~l~~~~~~~~l~~~IET~~gv~~~~eIa~a~~~v~~ 185 (316)
T 3qll_A 106 LRINGLDTRAGIEDIHALLECGSLPDYLVLPKTESAAHLQILDRLMMFAGSDTRLIGIIESVRGLNAVESIAAATPKLAG 185 (316)
T ss_dssp EECCCTTSHHHHHHHHHHHHSCCCCSEEEETTCCSHHHHHHHHHHTSCC--CCEEEEEECSHHHHHTHHHHHTSCTTEEE
T ss_pred EEECCCCCchhHHHHHHHHhCCCCCCEEEeCCCCCHHHHHHHHHHHHhcCCCCEEEEEEcCHHHHHHHHHHHhcCCCceE
Confidence 344444 3556789999999985 9999999999999999999998777789999999999999999999983 589
Q ss_pred EEEcCCcccccCCh----HHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 306 VVLNRIQLAVATSV----EVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 306 ImIargDLg~e~~~----e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
+++|..||+.++|. +.+..+..+++.+|+++|++++- +... ++-|. -+-..++..+...|.++-+.-
T Consensus 186 l~~G~~DL~~~lG~~~~~~~l~~ar~~iv~AaraaGi~~id-~v~~------~~~D~-~gl~~e~~~~r~lGf~Gk~~I 256 (316)
T 3qll_A 186 LIFGAADMAADIGAASTWEPLALARARLVSACAMNGIPAID-APFF------DVHDV-SGLQSETLRASDFGFSAKAAI 256 (316)
T ss_dssp EEECHHHHHHHHTCCSSHHHHHHHHHHHHHHHHHHTCCEEE-CCCS------CSSCH-HHHHHHHHHHHHHTCCEEEES
T ss_pred EEECHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHcCCceee-cccc------CcCCH-HHHHHHHHHHHHCCCCeEEee
Confidence 99999999999986 46777888999999999999853 2211 12000 001245667888999976664
No 19
>2ols_A Phosphoenolpyruvate synthase; MC structural genomics, PSI-2, protein structure initiative, M center for structural genomics, transferase; 2.40A {Neisseria meningitidis}
Probab=99.20 E-value=2.8e-11 Score=138.44 Aligned_cols=136 Identities=11% Similarity=0.106 Sum_probs=114.6
Q ss_pred CChhhHHHHHHHHH-cC--CcEEEEcccCChhhHHHHHHHHHhcCC----C-ceEEEEecCHHHHhhHHHHHhhcCEEEE
Q psy6272 237 IADRDKHVVDLIVR-EA--VDIIIMSSVTGANSIREMRGMLEDHVD----R-VLILAKIETLLGMEYMDEIIMESDGVVL 308 (547)
Q Consensus 237 lt~~D~~di~~~~~-~g--~d~I~~sfV~sa~di~~~r~~l~~~~~----~-i~IiakIEt~~av~nldeIl~~~DgImI 308 (547)
+.+.+...|..+.+ +| .+.|++|||+++++++.+++.+...+. + +.++++||++.|+.|+|+|++++|+++|
T Consensus 622 ~~~~ql~Ai~ra~~~~G~~~~~ImvP~V~t~~E~~~~~~~l~~~g~~~~~~~~~vg~MIEtp~a~~~ad~ia~~vD~~si 701 (794)
T 2ols_A 622 CFALECKALKRVRDEMGLTNVEIMIPFVRTLGEAEAVVKALKENGLERGKNGLRLIMMCELPSNAVLAEQFLQYFDGFSI 701 (794)
T ss_dssp HHHHHHHHHHHHHHTSCCTTEEEEECCCCSHHHHHHHHHHHHHTTCCTTGGGCCEEEEECSHHHHHTHHHHHTTSSEEEE
T ss_pred HHHHHHHHHHHHHHhcCCCCceEEecCCCCHHHHHHHHHHHHhcCcccCccCCEEEEEECcHHHHHHHHHHHHhCCEEEE
Confidence 33557778888999 68 899999999999999999999976552 3 8899999999999999999999999999
Q ss_pred cCCccccc-CCh---------------HHHHHHHHHHHHHHHHcCCcEEEEcCCCC-CCCcccccccCccchhhHHHHHH
Q psy6272 309 NRIQLAVA-TSV---------------EVTFLAQKMIAARCNKQGKPFLVVGDILP-DHNVEEYSDVSIGDMNDVNSIVQ 371 (547)
Q Consensus 309 argDLg~e-~~~---------------e~v~~~qk~ii~~c~~~gKPvi~aTq~Le-~PtraE~~~~~~~~~~Dv~nav~ 371 (547)
|..||+.. +|. +.|..+.++++.+|+++|||+++++++-- +| ..+..++.
T Consensus 702 GtnDLtq~tlg~~R~~~~~~~~~~~~~p~v~~~i~~~v~aar~~g~~vgicGe~~~~dp-------------~~~~~~~~ 768 (794)
T 2ols_A 702 GSNDMTQLTLGLDRDSGLVSESFDERNPAVKVMLHLAISACRKQNKYVGICGQGPSDHP-------------DFAKWLVE 768 (794)
T ss_dssp EHHHHHHHHHTCCTTCTTTGGGCCTTSHHHHHHHHHHHHHHHTTTCEEEEESSHHHHCH-------------HHHHHHHH
T ss_pred CHHHHHHHHhCCCCCcchhccccCCCCHHHHHHHHHHHHHHHHhCCEEEEecccCCCCH-------------HHHHHHHH
Confidence 99999997 774 56888999999999999999999877421 22 22345788
Q ss_pred hCccEEeeCCcchHH
Q psy6272 372 DGADVVVLTQSEQAH 386 (547)
Q Consensus 372 ~g~D~vmLsk~Eta~ 386 (547)
.|.|.+.++ .++..
T Consensus 769 ~G~~~~s~~-p~~v~ 782 (794)
T 2ols_A 769 EGIESVSLN-PDTVI 782 (794)
T ss_dssp HTCCEEEEC-GGGHH
T ss_pred CCCCEEEEC-HhHHH
Confidence 899999998 66554
No 20
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=99.17 E-value=1.4e-10 Score=128.08 Aligned_cols=134 Identities=13% Similarity=0.087 Sum_probs=110.3
Q ss_pred hhhHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHh-------cC----CCceEEEEecCHHHHhhHHHHHhhcCEEE
Q psy6272 239 DRDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLED-------HV----DRVLILAKIETLLGMEYMDEIIMESDGVV 307 (547)
Q Consensus 239 ~~D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~-------~~----~~i~IiakIEt~~av~nldeIl~~~DgIm 307 (547)
..+...|..+.+.|...|++|||+++++++.+++.+.+ .| .++.+.++||++.|+.++|+|++.+|++.
T Consensus 371 ~~QlrAi~rA~~~G~~~Im~PmV~t~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vDf~s 450 (575)
T 2hwg_A 371 RDQLRAILRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAFDESIEIGVMVETPAAATIARHLAKEVDFFS 450 (575)
T ss_dssp HHHHHHHHHHTTSSCEEEEESSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCTTCEEEEEECSHHHHHTHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEECcHHHHHHHHHHHHhCCEEE
Confidence 34557788899999999999999999999888887732 22 36899999999999999999999999999
Q ss_pred EcCCcccc----------cCCh------HHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHH
Q psy6272 308 LNRIQLAV----------ATSV------EVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQ 371 (547)
Q Consensus 308 IargDLg~----------e~~~------e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~ 371 (547)
||..||+. .++. +.|..+.++++.+|+++|||++++.++--+|.- +.-++.
T Consensus 451 iGtNDLtqy~la~dR~~~~l~~~~dp~~paVl~li~~vv~aa~~~g~~vgvCGe~agdp~~-------------~~~l~~ 517 (575)
T 2hwg_A 451 IGTNDLTQYTLAVDRGNDMISHLYQPMSPSVLNLIKQVIDASHAEGKWTGMCGELAGDERA-------------TLLLLG 517 (575)
T ss_dssp ECHHHHHHHHHTCCTTCGGGGGGCCSSSHHHHHHHHHHHHHHHHTTCEEEECSTTTTCTTT-------------HHHHHH
T ss_pred ECHHHHHHHHhCcCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCCCCCHHH-------------HHHHHH
Confidence 99999998 5553 678889999999999999999997764324433 344788
Q ss_pred hCccEEeeCCcchHH
Q psy6272 372 DGADVVVLTQSEQAH 386 (547)
Q Consensus 372 ~g~D~vmLsk~Eta~ 386 (547)
.|.|.+.++ .....
T Consensus 518 lG~~~~S~~-p~~v~ 531 (575)
T 2hwg_A 518 MGLDEFSMS-AISIP 531 (575)
T ss_dssp TTCCEEEEC-GGGHH
T ss_pred CCCCEEEEC-ccHHH
Confidence 899998888 55443
No 21
>1u5h_A CITE; TIM barrel, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC, lyase; 1.65A {Mycobacterium tuberculosis} SCOP: c.1.12.5 PDB: 1u5v_A* 1z6k_A
Probab=99.15 E-value=1.2e-10 Score=117.65 Aligned_cols=126 Identities=17% Similarity=0.159 Sum_probs=100.0
Q ss_pred hhhHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh--cCEEEEcCCccccc
Q psy6272 239 DRDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME--SDGVVLNRIQLAVA 316 (547)
Q Consensus 239 ~~D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~--~DgImIargDLg~e 316 (547)
+.-..||+.+++.|+|+|++|+|+++++++.+. ++.++++|||++|+.|++||+.. .||+++|+.||+.+
T Consensus 71 ~~~~~dl~~~~~~g~~gi~lPKv~s~~~v~~~~--------~~~i~~~IET~~~v~~~~eIaa~~~v~~l~~G~~Dl~~~ 142 (273)
T 1u5h_A 71 ADQARDLEALAGTAYTTVMLPKAESAAQVIELA--------PRDVIALVETARGAVCAAEIAAADPTVGMMWGAEDLIAT 142 (273)
T ss_dssp HHHHHHHHHHHTSCCCEEEETTCCCHHHHHTTT--------TSEEEEEECSHHHHHTHHHHHHSTTEEEEEECHHHHHHH
T ss_pred hHHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHh--------hCCEEEEEeCHHHHHhHHHHhcCCCCcEEEecHHHHHHH
Confidence 355688999999999999999999999999773 68999999999999999999964 48999999999999
Q ss_pred CCh-----------HHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 317 TSV-----------EVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 317 ~~~-----------e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
+|. +.+..+..+++.+|+++|++++. +-..+..+.+- -..+...+...|.|+-++-
T Consensus 143 lG~~~~~~~~~~~~~~~~~a~~~iv~aaraaG~~aid-~v~~~~~d~~g-------l~~~~~~~~~~Gf~Gk~~I 209 (273)
T 1u5h_A 143 LGGSSSRRADGAYRDVARHVRSTILLAASAFGRLALD-AVHLDILDVEG-------LQEEARDAAAVGFDVTVCI 209 (273)
T ss_dssp HTCSCSBCTTSCBCHHHHHHHHHHHHHHHHTTCEEEE-CCCSCTTCHHH-------HHHHHHHHHHHTCSEEEES
T ss_pred hCCCCCCCccccccHHHHHHHHHHHHHHHHcCCCccc-CCcCCCCCHHH-------HHHHHHHHHhCCCCceeec
Confidence 985 24777888999999999999853 22111001000 1145678889999987775
No 22
>2wqd_A Phosphoenolpyruvate-protein phosphotransferase; kinase, cytoplasm, transport, magnesium, PEP- utilising enzyme, phosphotransferase system; 2.40A {Staphylococcus aureus} PDB: 2hro_A
Probab=99.14 E-value=1.1e-10 Score=129.03 Aligned_cols=130 Identities=15% Similarity=0.115 Sum_probs=106.4
Q ss_pred hhHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHh-------c----CCCceEEEEecCHHHHhhHHHHHhhcCEEEE
Q psy6272 240 RDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLED-------H----VDRVLILAKIETLLGMEYMDEIIMESDGVVL 308 (547)
Q Consensus 240 ~D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~-------~----~~~i~IiakIEt~~av~nldeIl~~~DgImI 308 (547)
.+...|..+.+.|...|++|||+++++++.+++++.+ . +.++.+.++||++.|+.++|+|++++|+++|
T Consensus 374 ~QlrAi~rA~~~G~~~Im~PmV~s~~E~~~a~~~v~~~~~~l~~~G~~~~~~~~vg~MIE~P~a~~~ad~ia~~vDf~si 453 (572)
T 2wqd_A 374 PQLRALLRASVYGKLNIMFPMVATINEFREAKAILLEEKENLKNEGHDISDDIELGIMVEIPATAALADVFAKEVDFFSI 453 (572)
T ss_dssp HHHHHHHHHTTTSCEEEEESCCCSHHHHHHHHHHHHHHHHHHHHHTCCCCSCCEEEEEECCHHHHHTHHHHHHHCSEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCCcEEEEEEccHHHHHHHHHHHHhCCEEEE
Confidence 3456788999999999999999999999998887732 1 2468999999999999999999999999999
Q ss_pred cCCccccc-CC---------------hHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHh
Q psy6272 309 NRIQLAVA-TS---------------VEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQD 372 (547)
Q Consensus 309 argDLg~e-~~---------------~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~ 372 (547)
|..||+.. ++ .+.|..+.++++.+|+++|||++++.++--+|. .+.-++..
T Consensus 454 GtNDLtQ~~lg~dR~~~~v~~~~dp~~paVl~li~~vv~aa~~~g~~vgiCGe~agdp~-------------~~~~l~~l 520 (572)
T 2wqd_A 454 GTNDLIQYTLAADRMSERVSYLYQPYNPSILRLVKQVIEASHKEGKWTGMCGEMAGDET-------------AIPLLLGL 520 (572)
T ss_dssp CHHHHHHHHHTCCSSSGGGGGGCCTTCHHHHHHHHHHHHHHHHTTCEEEECSGGGGCTT-------------THHHHHHH
T ss_pred CHHHHHHHHhccCCCccccccccCCCCHHHHHHHHHHHHHHHHhCCeEEEeCCccCCHH-------------HHHHHHHC
Confidence 99999932 22 257888899999999999999999766322333 33447888
Q ss_pred CccEEeeCCcc
Q psy6272 373 GADVVVLTQSE 383 (547)
Q Consensus 373 g~D~vmLsk~E 383 (547)
|.|.+..+ ..
T Consensus 521 G~~~~S~~-p~ 530 (572)
T 2wqd_A 521 GLDEFSMS-AT 530 (572)
T ss_dssp TCCEEEEC-HH
T ss_pred CCCEEEec-cc
Confidence 99999988 44
No 23
>3qqw_A Putative citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE; 2.44A {Ralstonia eutropha}
Probab=99.13 E-value=2.2e-10 Score=118.83 Aligned_cols=155 Identities=15% Similarity=0.033 Sum_probs=110.3
Q ss_pred ChhhHHHHHHHHHc---CCcEEEEcccCChhhHHHHHHHHHhc----C--CCceEEEEecCHHHHhhHHHHHhh--cCEE
Q psy6272 238 ADRDKHVVDLIVRE---AVDIIIMSSVTGANSIREMRGMLEDH----V--DRVLILAKIETLLGMEYMDEIIME--SDGV 306 (547)
Q Consensus 238 t~~D~~di~~~~~~---g~d~I~~sfV~sa~di~~~r~~l~~~----~--~~i~IiakIEt~~av~nldeIl~~--~DgI 306 (547)
|+.-..||...++. |+|+|++|+|++++|++.+.+++... | ..+.++++|||++|+.|+++|+.. .|++
T Consensus 94 t~~~~~DL~av~~~~~~g~dgI~LPKvesa~dv~~~~~~l~~~e~~~G~~~~i~l~~~IET~~gv~~~~eIaa~~rv~~L 173 (332)
T 3qqw_A 94 HPAWRQDVDIIVNGAGGRLAYITVPKATNSGQVAEVIRYIGDVAKRAGLDKPVPVHVLIETHGALRDVFQIAELPNIEVL 173 (332)
T ss_dssp STTHHHHHHHHHHHSTTCCCCEEECCCCSHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHTTSTTEEEE
T ss_pred ChHHHHHHHHHHhhcccCCCEEEeCCCCCHHHHHHHHHHHHHHHHhcCCCCCeEEEEEecCHHHHHHHHHHhcCcCCCEE
Confidence 34556777777776 99999999999999999999888542 2 468899999999999999999954 5899
Q ss_pred EEcCCcccccCCh---------------HHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHH-
Q psy6272 307 VLNRIQLAVATSV---------------EVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIV- 370 (547)
Q Consensus 307 mIargDLg~e~~~---------------e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav- 370 (547)
++|+.||+.++|. +.+..+..+++.+|+++|+++|- +...+ +-|. .+-..+...+.
T Consensus 174 ~~G~~DL~~~lg~~~~~~~~~~~g~~~~p~l~~ar~~vv~AAraaGi~~id-~v~~d------~~D~-~gl~~~~~~~~~ 245 (332)
T 3qqw_A 174 DFGLMDFVSGHHGAIPAAAMRSPGQFEHALLVRAKADMVAAALANGIVPAH-NVCLN------LKDA-EVIASDACRARN 245 (332)
T ss_dssp EECHHHHHHTTTTCSCGGGGSTTGGGTSHHHHHHHHHHHHHHHHTTCEEEE-CCCSC------SSCH-HHHHHHHHHHHH
T ss_pred EEcHHHHHHHhCCCccccccCCCCcccCHHHHHHHHHHHHHHHHhCCCccc-CCccc------ccCH-HHHHHHHHHHHH
Confidence 9999999998875 23667888999999999999854 22221 2000 00113455676
Q ss_pred HhCccEEeeCCcchHH-----------HHHHHHHHHHHHhhh
Q psy6272 371 QDGADVVVLTQSEQAH-----------HRVDILKEILKKTES 401 (547)
Q Consensus 371 ~~g~D~vmLsk~Eta~-----------eaV~~m~~I~~~aE~ 401 (547)
..|.|+-+.- .+.-+ +-|++-.+|+..+|+
T Consensus 246 ~lGf~Gk~~I-HP~QI~~in~~f~Ps~~ei~~A~~il~a~~~ 286 (332)
T 3qqw_A 246 EFGFLRMWSI-YPAQIQPIVNAMRPDFTEVEDAAGILVAAQD 286 (332)
T ss_dssp HHCCCEEEES-SGGGHHHHHHHHSCCHHHHHHHHCC------
T ss_pred hCCCCccccc-CHHHHHHHHHHhCcCHHHHHHHHHHHHHHHh
Confidence 7899977664 44333 666666666665543
No 24
>3r4i_A Citrate lyase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.24A {Burkholderia xenovorans}
Probab=99.10 E-value=9.1e-10 Score=114.51 Aligned_cols=153 Identities=18% Similarity=0.137 Sum_probs=110.0
Q ss_pred hhHHHHHHHHHc---CCcEEEEcccCChhhHHHHHHHHHhc----C--CCceEEEEecCHHHHhhHHHHHhh--cCEEEE
Q psy6272 240 RDKHVVDLIVRE---AVDIIIMSSVTGANSIREMRGMLEDH----V--DRVLILAKIETLLGMEYMDEIIME--SDGVVL 308 (547)
Q Consensus 240 ~D~~di~~~~~~---g~d~I~~sfV~sa~di~~~r~~l~~~----~--~~i~IiakIEt~~av~nldeIl~~--~DgImI 308 (547)
.-..||...++. |+|+|++|+|++++|++.+.+++.+. | ..+.++++|||++|+.|+++|+.. .|++++
T Consensus 95 ~~~~DL~al~~~~~~g~~~I~LPKves~~dv~~~~~~l~~~e~~~G~~~~~~l~~~IET~~gv~~~~eIAa~~rv~~L~~ 174 (339)
T 3r4i_A 95 HWRDDVRLILRAAKRAPAYITLPKIRHVHDAAEMVAFIEATRRELGIAQPVPVQLLVETHGALTRVFDLAALPGVEALSF 174 (339)
T ss_dssp THHHHHHHHHHHCSSCCSCEEECC-CCHHHHHHHHHHHHHHHHHTTCSSCCCEEEEECSHHHHHTHHHHHTCTTEEEEEE
T ss_pred HHHHHHHHhhhhccCCCCEEEeCCCCCHHHHHHHHHHHHHHHHHcCCCCCcEEEEEeccHHHHHhHHHHHcCcCCCEEEE
Confidence 456677777765 89999999999999999999888542 2 368899999999999999999944 599999
Q ss_pred cCCcccccCCh---------------HHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHH-Hh
Q psy6272 309 NRIQLAVATSV---------------EVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIV-QD 372 (547)
Q Consensus 309 argDLg~e~~~---------------e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav-~~ 372 (547)
|.+||+.++|. +.+..+..+++.+|+++|++++. +-.. ++-|. .+...+...+. ..
T Consensus 175 G~~DL~~~lg~~~~~~~~~~~~~~~~p~~~~a~~~iv~AAraaGi~~id-~v~~------d~~D~-~gl~~~~~~~~~~l 246 (339)
T 3r4i_A 175 GLMDFVSAHDGAIPDTAMRSPGQFDHPLVRRAKLEISAACHAYGKVPSH-NVST------EVRDM-SVVANDAARARNEF 246 (339)
T ss_dssp CHHHHHHTTTTSSCGGGGSTTHHHHSHHHHHHHHHHHHHHHHTTCEEEE-CCCC------CSSCH-HHHHHHHHHHHHTT
T ss_pred CHHHHHHHhCCCcCccccCCCccccCHHHHHHHHHHHHHHHHcCCCCcc-CCCc------CCCCh-HHHHHHHHHHHHhC
Confidence 99999998874 12566788899999999999864 2211 12000 00113445665 68
Q ss_pred CccEEeeCCcchHH-----------HHHHHHHHHHHHhhh
Q psy6272 373 GADVVVLTQSEQAH-----------HRVDILKEILKKTES 401 (547)
Q Consensus 373 g~D~vmLsk~Eta~-----------eaV~~m~~I~~~aE~ 401 (547)
|.|+-+.- .+.-+ +-|++-.+|+..+|+
T Consensus 247 Gf~Gk~~I-HP~QI~~in~~f~Ps~~ei~~A~~il~a~~~ 285 (339)
T 3r4i_A 247 GYTRMWSI-HPAQIEAIVAAFAPRDEEITTATEILLAAQS 285 (339)
T ss_dssp CCSEEEES-SHHHHHHHHHHTSCCTHHHHHHHHHHHHHHH
T ss_pred CCCcceee-CHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 99976665 44433 666666777665543
No 25
>3oyz_A Malate synthase; TIM barrel, transferase; HET: ACO; 1.95A {Haloferax volcanii} PDB: 3oyx_A* 3pug_A
Probab=98.74 E-value=1.8e-08 Score=107.12 Aligned_cols=137 Identities=9% Similarity=-0.027 Sum_probs=106.0
Q ss_pred Chh-hHHHHHHHHH------cCCcEEEEcccCChhhHHHHHHHHHhc----C---CCceEEEEecCHHH---HhhHHHHH
Q psy6272 238 ADR-DKHVVDLIVR------EAVDIIIMSSVTGANSIREMRGMLEDH----V---DRVLILAKIETLLG---MEYMDEII 300 (547)
Q Consensus 238 t~~-D~~di~~~~~------~g~d~I~~sfV~sa~di~~~r~~l~~~----~---~~i~IiakIEt~~a---v~nldeIl 300 (547)
|++ ..+||...+. .++|+|++|+|+++++++.+...|... | ..+.++++|||++| +.|+++|+
T Consensus 94 T~~~~~~DL~al~~~~~~a~~~~dgIvLPKvesa~dV~~l~~~L~~~E~~~Gl~~G~i~lialIETa~g~~~L~na~eIA 173 (433)
T 3oyz_A 94 TRYQGFQHMLDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRDEM 173 (433)
T ss_dssp HHHHHHHHHHHHTCGGGSCGGGCCEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCSEEEEEECSHHHHHHGGGHHHHH
T ss_pred ChhccHHHHHHHhccccccccCCCEEEeCCCCCHHHHHHHHHHHHHHHHHhCCCCCCeEEEEEEeChhHHHHHHHHHHHH
Confidence 455 6788988887 789999999999999999998887542 2 26899999999999 99999999
Q ss_pred hhc-------CEEEEcCCcccccCChH-------HHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhH
Q psy6272 301 MES-------DGVVLNRIQLAVATSVE-------VTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDV 366 (547)
Q Consensus 301 ~~~-------DgImIargDLg~e~~~e-------~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv 366 (547)
.++ +|+++|+.||+.++|.. .+..+..+++.+|+++|++++-. ... .+-|. .+-..++
T Consensus 174 aasr~~~pRV~gL~~G~~DLsasLG~~~~~~~~~el~~ARs~IVlAARAaGi~aIDg-V~~------di~D~-egL~~ea 245 (433)
T 3oyz_A 174 GKPTNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVAVDG-PYD------DIRDV-EGYRERM 245 (433)
T ss_dssp HCTTCCGGGEEEEEECHHHHHHHHTCCCTTCCCCCCHHHHHHHHHHHHHHTCEEEEC-CCC------CTTCH-HHHHHHH
T ss_pred hhhccCCCCeEEEEECHHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHhCCCcccc-ccc------CCCCH-HHHHHHH
Confidence 763 79999999999999863 36677888999999999997642 211 11000 0112466
Q ss_pred HHHHHhCccEEeeCCcc
Q psy6272 367 NSIVQDGADVVVLTQSE 383 (547)
Q Consensus 367 ~nav~~g~D~vmLsk~E 383 (547)
..+...|.++-+.- .+
T Consensus 246 ~~ar~lGF~GK~~I-HP 261 (433)
T 3oyz_A 246 TDNQAKGMLGIWSL-TP 261 (433)
T ss_dssp HHHHTTTCCEEEEC-SH
T ss_pred HHHHhCCCCceEec-CH
Confidence 78888999988775 44
No 26
>1vbg_A Pyruvate,orthophosphate dikinase; transferase, maize, riken structural genomics/proteomics INI RSGI, structural genomics; 2.30A {Zea mays} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1vbh_A*
Probab=98.52 E-value=1.4e-07 Score=108.67 Aligned_cols=120 Identities=14% Similarity=0.061 Sum_probs=96.3
Q ss_pred CCc---EEEEcccCChhhHHHHHHHHHh--------cC--CCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCccc-ccC
Q psy6272 252 AVD---IIIMSSVTGANSIREMRGMLED--------HV--DRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLA-VAT 317 (547)
Q Consensus 252 g~d---~I~~sfV~sa~di~~~r~~l~~--------~~--~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg-~e~ 317 (547)
|.+ .|++|||+++++++.+++++.+ .| .++++.++||++.|+.++|+|++.+|++.||..||+ ..+
T Consensus 701 G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~G~~~~~~vg~MIEtP~a~l~adeIA~~vDf~siGtNDLtQ~~l 780 (876)
T 1vbg_A 701 GVQVFPEIMVPLVGTPQELGHQVTLIRQVAEKVFANVGKTIGYKVGTMIEIPRAALVADEIAEQAEFFSFGTNDLTQMTF 780 (876)
T ss_dssp TCCCEEEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHTTTCSEEEECHHHHHHHHH
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHHHhCCEEEECHHHHHHHHh
Confidence 765 6999999999999999987642 23 368899999999999999999999999999999998 444
Q ss_pred Ch----------------------------HHHHHHHHHHHHHHHHc--CCcEEEEcCCCCCCCcccccccCccchhhHH
Q psy6272 318 SV----------------------------EVTFLAQKMIAARCNKQ--GKPFLVVGDILPDHNVEEYSDVSIGDMNDVN 367 (547)
Q Consensus 318 ~~----------------------------e~v~~~qk~ii~~c~~~--gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~ 367 (547)
|. +.|..+.++++++|+++ ||||+++.++=-+| .-+.
T Consensus 781 g~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe~~gdP-------------~~~~ 847 (876)
T 1vbg_A 781 GYSRDDVGKFIPVYLAQGILQHDPFEVLDQRGVGELVKFATERGRKARPNLKVGICGEHGGEP-------------SSVA 847 (876)
T ss_dssp TCCTTTGGGTHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEEESGGGGSH-------------HHHH
T ss_pred CCCCCchhhhHHHHhhcccccCCcccccchHHHHHHHHHHHHHHHHhCCCCEEEEcCCcCCCH-------------HHHH
Confidence 43 34666788899999998 99999998732222 3334
Q ss_pred HHHHhCccEEeeCCcchH
Q psy6272 368 SIVQDGADVVVLTQSEQA 385 (547)
Q Consensus 368 nav~~g~D~vmLsk~Eta 385 (547)
-.+..|.|-+-+| ....
T Consensus 848 ~l~~~Gl~~vS~s-p~~v 864 (876)
T 1vbg_A 848 FFAKAGLDYVSCS-PFRV 864 (876)
T ss_dssp HHHHTTCSEEEEC-GGGH
T ss_pred HHHHcCCCEEEEC-cchH
Confidence 4788999999998 5443
No 27
>1kbl_A PPDK, pyruvate phosphate dikinase; transferase, phosphotransferase; 1.94A {Clostridium symbiosum} SCOP: c.1.12.2 c.8.1.1 d.142.1.5 PDB: 1kc7_A* 1dik_A 1ggo_A 1jde_A 2dik_A 2r82_A 2fm4_A
Probab=98.38 E-value=3.8e-07 Score=105.06 Aligned_cols=133 Identities=14% Similarity=0.079 Sum_probs=101.4
Q ss_pred hhhHHHHHHHHHc-----CCc---EEEEcccCChhhHHHHHHHHHh--------cC--CCceEEEEecCHHHHhhHHHHH
Q psy6272 239 DRDKHVVDLIVRE-----AVD---IIIMSSVTGANSIREMRGMLED--------HV--DRVLILAKIETLLGMEYMDEII 300 (547)
Q Consensus 239 ~~D~~di~~~~~~-----g~d---~I~~sfV~sa~di~~~r~~l~~--------~~--~~i~IiakIEt~~av~nldeIl 300 (547)
+-....|..|... |.+ .|++|||+++++++.+++.+.+ .| .++++.++||++.|+.++++|+
T Consensus 677 ~~QlrAi~~Aa~~~~~~~G~~~~~~ImiP~V~t~~E~~~~~~~i~~~~~~~~~~~g~~~~~~vg~MIEtP~a~l~ad~iA 756 (873)
T 1kbl_A 677 KMQTRAVMEAAIEVKEETGIDIVPEIMIPLVGEKKELKFVKDVVVEVAEQVKKEKGSDMQYHIGTMIEIPRAALTADAIA 756 (873)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCCCEEEECSCCSHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEECSHHHHHTHHHHT
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCEEEEEecCCCHHHHHHHHHHHHHHHHHHHHhcCCCcCcEEEEEEccHHHHHHHHHHH
Confidence 3344455444333 865 7999999999999999987742 23 3688999999999999999999
Q ss_pred hhcCEEEEcCCccc-ccCCh----------------------------HHHHHHHHHHHHHHHHc--CCcEEEEcCCCCC
Q psy6272 301 MESDGVVLNRIQLA-VATSV----------------------------EVTFLAQKMIAARCNKQ--GKPFLVVGDILPD 349 (547)
Q Consensus 301 ~~~DgImIargDLg-~e~~~----------------------------e~v~~~qk~ii~~c~~~--gKPvi~aTq~Le~ 349 (547)
+.+|++.||..||. ..++. +-|-.+.++++++|+++ |+||+++.++=-+
T Consensus 757 ~~vdf~siGtNDLtQ~~lg~dR~~~~~~~~~~~~~~i~~~dp~~~ld~paV~~li~~~~~~~~~~~~g~~vgiCGe~~gd 836 (873)
T 1kbl_A 757 EEAEFFSFGTNDLTQMTFGFSRDDAGKFLDSYYKAKIYESDPFARLDQTGVGQLVEMAVKKGRQTRPGLKCGICGEHGGD 836 (873)
T ss_dssp TTCSEEEECHHHHHHHHHTCCHHHHHHHHHHHHHTTSCSSCTTTSCCTTTHHHHHHHHHHHHHHHCTTCEEEECSGGGGS
T ss_pred HhCCEEEECHHHHHHHHhCCCCCchhhhHHHHHhccccccCchhhhchHHHHHHHHHHHHHHHHhCCCCeEEECCCCCCC
Confidence 99999999999999 55554 23555778899999997 9999998873222
Q ss_pred CCcccccccCccchhhHHHHHHhCccEEeeCCcchH
Q psy6272 350 HNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQA 385 (547)
Q Consensus 350 PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta 385 (547)
| .-+.-.+..|.|.+-+| ....
T Consensus 837 P-------------~~~~~l~~~Gl~~vS~s-p~~v 858 (873)
T 1kbl_A 837 P-------------SSVEFCHKVGLNYVSCS-PFRV 858 (873)
T ss_dssp H-------------HHHHHHHHTTCSEEEEC-GGGH
T ss_pred H-------------HHHHHHHHcCCCEEEEC-hhHH
Confidence 2 33344788999999998 4433
No 28
>3cuz_A MSA, malate synthase A; TIM barrel, cytoplasm, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.04A {Escherichia coli} PDB: 3cv1_A 3cv2_A*
Probab=98.02 E-value=6.7e-05 Score=81.99 Aligned_cols=148 Identities=12% Similarity=0.037 Sum_probs=102.1
Q ss_pred hhHHHHHHHHHcC-CcEEEEcccCChhhHHHHHHHHHh----cC---CCceEEEEecCHHHHhhHHHHHhh-c---CEEE
Q psy6272 240 RDKHVVDLIVREA-VDIIIMSSVTGANSIREMRGMLED----HV---DRVLILAKIETLLGMEYMDEIIME-S---DGVV 307 (547)
Q Consensus 240 ~D~~di~~~~~~g-~d~I~~sfV~sa~di~~~r~~l~~----~~---~~i~IiakIEt~~av~nldeIl~~-~---DgIm 307 (547)
.-.+|++..+..| .++|.+|+++++++++.+.+.+.. .| ..+++++.|||..|+-|++||+.. . .|+.
T Consensus 193 ~~~~Dl~~l~~~g~g~~i~LPK~es~~Ev~~~~~~f~~~E~~lGlp~gtiki~vlIET~~a~~n~~eIa~al~~rv~gLn 272 (532)
T 3cuz_A 193 YFFHNYQALLAKGSGPYFYLPKTQSWQEAAWWSEVFSYAEDRFNLPRGTIKATLLIETLPAVFQMDEILHALRDHIVGLN 272 (532)
T ss_dssp HHHHHHHHHHHTTCCCEEEECCCCCHHHHHHHHHHHHHHHHHTTCCTTCSEEEEECCSHHHHTSHHHHHHHTTTTEEEEE
T ss_pred HHHHHHHHHHcCCCCCeEEccCCCCHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeccHHHHHhHHHHHHhccCCceEEE
Confidence 4455666666643 499999999999999999887742 12 358999999999999999999976 3 5999
Q ss_pred EcCCcccccCCh--------------------HHHHHHHHHHHHHHHHcCCcEEEE-cCCCCCCCccccc-ccC-ccchh
Q psy6272 308 LNRIQLAVATSV--------------------EVTFLAQKMIAARCNKQGKPFLVV-GDILPDHNVEEYS-DVS-IGDMN 364 (547)
Q Consensus 308 IargDLg~e~~~--------------------e~v~~~qk~ii~~c~~~gKPvi~a-Tq~Le~PtraE~~-~~~-~~~~~ 364 (547)
.|+.|+..++.. +-+....+..+..|+++|++.|-. +.+ .|.+..-- ..- ..-..
T Consensus 273 ~G~~Dy~~s~i~~~~~~~~~~lpdr~~~~~~~~~l~Ay~~llv~ac~a~G~~aIdGm~a~--~p~kD~e~~~~~~~~l~~ 350 (532)
T 3cuz_A 273 CGRWDYIFSYIKTLKNYPDRVLPDRQAVTMDKPFLNAYSRLLIKTCHKRGAFAMGGMAAF--IPSKDEEHNNQVLNKVKA 350 (532)
T ss_dssp CCSHHHHHHHHHHTTTCGGGCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEECB--CCCSSGGGCHHHHHHHHH
T ss_pred cCHHHHHHHHHhhcccCCCccCccccccccchHHHHHHHHHHHHHHHHcCCCCccCcccc--CCCCChhHHHHHHHHHHH
Confidence 999999877621 113334444449999999988761 122 23221110 000 00125
Q ss_pred hHHHHHHhCccEEeeCCcchHHHHHH
Q psy6272 365 DVNSIVQDGADVVVLTQSEQAHHRVD 390 (547)
Q Consensus 365 Dv~nav~~g~D~vmLsk~Eta~eaV~ 390 (547)
|...+..+|+|+-+.- .++.+..+.
T Consensus 351 dk~~~~~~GfdGkwvi-HP~qv~~~n 375 (532)
T 3cuz_A 351 DKSLEANNGHDGTWIA-HPGLADTAM 375 (532)
T ss_dssp HHHHHHHHTCSEEEES-SGGGHHHHH
T ss_pred HHHHHHHCCCCccccC-CHHHHHHHH
Confidence 6668889999999999 888775444
No 29
>3cux_A Malate synthase; TIM barrel, glyoxylate bypass, transferase, tricarboxylic acid cycle; 1.70A {Bacillus anthracis}
Probab=97.90 E-value=4.7e-05 Score=83.12 Aligned_cols=143 Identities=13% Similarity=0.055 Sum_probs=100.5
Q ss_pred HHHHHHHH--HcCCcEEEEcccCChhhHHHHHHHHHhc----C---CCceEEEEecCHHHHhhHHHHHhh-c---CEEEE
Q psy6272 242 KHVVDLIV--REAVDIIIMSSVTGANSIREMRGMLEDH----V---DRVLILAKIETLLGMEYMDEIIME-S---DGVVL 308 (547)
Q Consensus 242 ~~di~~~~--~~g~d~I~~sfV~sa~di~~~r~~l~~~----~---~~i~IiakIEt~~av~nldeIl~~-~---DgImI 308 (547)
..|++..+ ..|+ +|.+|++++++|++.+.+.+... | ..+++.+.|||..|+-|++||+.. . .|+..
T Consensus 192 ~hdl~~l~~~~~gp-yi~LPK~es~~Ev~~~~~lf~~~E~~lGlp~gtIki~vlIET~~a~~n~~eI~~a~~~rv~gLn~ 270 (528)
T 3cux_A 192 FHNAKALLEKGSGP-YFYLPKMESYLEARLWNDVFVFAQKYIGIPNGTIKATVLLETIHASFEMDEILYELKDHSAGLNC 270 (528)
T ss_dssp HHHHHHHHHTTCCC-EEEECCCCSHHHHHHHHHHHHHHHHHHTCCTTCCEEEEEECSHHHHTSHHHHHHHTGGGEEEEEE
T ss_pred HHHHHHHHhcCCCC-EEEccCCCCHHHHHHHHHHHHHHHHHhCCCCCceEEEEEeCCHHHHHhHHHHHHhccCceeEEec
Confidence 33455554 4576 99999999999999998877432 2 369999999999999999999966 3 59999
Q ss_pred cCCcccccCCh--------------------HHHHHHHHHHHHHHHHcCCcEEEEcCCCC-CCCc--ccccccC-ccchh
Q psy6272 309 NRIQLAVATSV--------------------EVTFLAQKMIAARCNKQGKPFLVVGDILP-DHNV--EEYSDVS-IGDMN 364 (547)
Q Consensus 309 argDLg~e~~~--------------------e~v~~~qk~ii~~c~~~gKPvi~aTq~Le-~Ptr--aE~~~~~-~~~~~ 364 (547)
||.|+..+++. +-+..+.+.++..|+++|++.|-. |.- .|.+ .|...-- .+-..
T Consensus 271 G~~Dy~~s~i~t~~~~~~~vlpdR~~v~~~~p~~~ay~~~lV~ac~a~G~~aIgG--m~a~ip~~~D~~~n~~~~~~~~~ 348 (528)
T 3cux_A 271 GRWDYIFSFLKAFRNHNEFLLPDRAQVTMTAPFMRAYSLKVIQTCHRRNAPAIGG--MAAQIPIKNNPEANEAAFEKVRA 348 (528)
T ss_dssp CSHHHHHHHHHHTTTCTTCCCCCGGGCCTTSHHHHHHHHHHHHHHHHTTCCEEC---------------------CHHHH
T ss_pred CHHHHHHHhhhhccCCccccchhhhhcccccHHHHHHHHHHHHHHHHcCCCCccc--ccccCcCcCChHHHHHHHHHHHH
Confidence 99998877642 235667778889999999998752 211 2432 1100000 01135
Q ss_pred hHHHHHHhCccEEeeCCcchHHHH
Q psy6272 365 DVNSIVQDGADVVVLTQSEQAHHR 388 (547)
Q Consensus 365 Dv~nav~~g~D~vmLsk~Eta~ea 388 (547)
|-.....+|+||-++- .++.++.
T Consensus 349 dk~~~~~~GfdGkwvi-HP~qv~~ 371 (528)
T 3cux_A 349 DKEREALDGHDGTWVA-HPGLVPV 371 (528)
T ss_dssp HHHHHHHHTCSBEEES-SGGGHHH
T ss_pred HHHHHHhCCCCccccc-CHHHHHH
Confidence 5668889999999999 8888754
No 30
>1p7t_A MSG, malate synthase G; TIM barrel, glyoxylate cycle, acetyl-COA, cysteine-sulfenic lyase; HET: ACO PG4; 1.95A {Escherichia coli str} SCOP: c.1.13.1 PDB: 1y8b_A 1d8c_A* 2jqx_A
Probab=97.61 E-value=0.00011 Score=81.86 Aligned_cols=138 Identities=8% Similarity=-0.015 Sum_probs=100.6
Q ss_pred hHHHHHHHHHc--CCcEEEEcccCChhhHHHHHHHHHh----cC---CCceEEEEecCHHHHhhHHHHHhh----cCEEE
Q psy6272 241 DKHVVDLIVRE--AVDIIIMSSVTGANSIREMRGMLED----HV---DRVLILAKIETLLGMEYMDEIIME----SDGVV 307 (547)
Q Consensus 241 D~~di~~~~~~--g~d~I~~sfV~sa~di~~~r~~l~~----~~---~~i~IiakIEt~~av~nldeIl~~----~DgIm 307 (547)
-..|++..+.. |.++|.+|+++++++++.+.+.+.. .| ..+++.+.|||+.|+-|++||+.. ..|+.
T Consensus 371 ~~hDl~al~~sg~G~~yIvLPKmespeEV~~~~~lf~~~E~~lGlp~gTIKi~vLIET~ra~~nl~EI~~aa~~Rv~gLn 450 (731)
T 1p7t_A 371 ALYDLKVQKNSRTGSVYIVKPKMHGPQEVAFANKLFTRIETMLGMAPNTLKMGIMDEERRTSLNLRSCIAQARNRVAFIN 450 (731)
T ss_dssp HHHHHHHCSSCSSSCEEEEECSCCSHHHHHHHHHHHHHHHHHTTCCTTCEEEEEEECSHHHHTTHHHHHHTTTTTEEEEE
T ss_pred HHhhHHHHhhCCCCCcEEEeCCCCCHHHHHHHHHHHHHHHHhhCCCCCceEEEEEECCHHHHHhHHHHHHhhccceEEEE
Confidence 35666655543 4799999999999999999887743 22 368999999999999999999853 35999
Q ss_pred EcCCcccccC-Ch----------------HHHHHHHHHHHH---HHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH
Q psy6272 308 LNRIQLAVAT-SV----------------EVTFLAQKMIAA---RCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN 367 (547)
Q Consensus 308 IargDLg~e~-~~----------------e~v~~~qk~ii~---~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~ 367 (547)
.|+.|+..++ +. +-+...++..+. +|+++|++.|-- .|.-.|..-+- -..|..
T Consensus 451 ~G~~Dyt~d~I~t~~~~~~~vR~~~t~~~~~~~AY~r~~V~~gLAcraaG~~aIgk-Gm~a~p~dmeg------~~~dk~ 523 (731)
T 1p7t_A 451 TGFLDRTGDEMHSVMEAGPMLRKNQMKSTPWIKAYERNNVLSGLFCGLRGKAQIGK-GMWAMPDLMAD------MYSQKG 523 (731)
T ss_dssp ECHHHHHHHHHHHTGGGSCBCCGGGSTTCHHHHHHHHHHHHHHHHTTCTTTSEEEE-CCCCCTTCHHH------HHHHTH
T ss_pred cCHHHHhhhhhcccccCCcccccccccchHHHHHHHHHhhhhHHHHHHcCCCCccc-ccccChhhHHH------HHHHHH
Confidence 9999998774 22 223345566665 899999998751 12223332111 224555
Q ss_pred HHHHhCccEEeeCCcchHH
Q psy6272 368 SIVQDGADVVVLTQSEQAH 386 (547)
Q Consensus 368 nav~~g~D~vmLsk~Eta~ 386 (547)
.....|+||-++- .++.+
T Consensus 524 ~~~~~GfdGkwVi-HP~qV 541 (731)
T 1p7t_A 524 DQLRAGANTAWVP-SPTAA 541 (731)
T ss_dssp HHHHTTCSEEEES-SHHHH
T ss_pred HHHhCCCCCcccC-CHHHH
Confidence 7788999999999 99888
No 31
>1h6z_A Pyruvate phosphate dikinase; transferase, tropical parasite, trypanosome; 3.00A {Trypanosoma brucei} PDB: 2x0s_A
Probab=97.57 E-value=0.00029 Score=81.49 Aligned_cols=138 Identities=13% Similarity=0.040 Sum_probs=102.5
Q ss_pred CCCCChhhHHHHHHHHH----cCCc---EEEEcccCChhhHHHHHHHHH--------hcC--CCceEEEEecCHHHHhhH
Q psy6272 234 LPVIADRDKHVVDLIVR----EAVD---IIIMSSVTGANSIREMRGMLE--------DHV--DRVLILAKIETLLGMEYM 296 (547)
Q Consensus 234 lp~lt~~D~~di~~~~~----~g~d---~I~~sfV~sa~di~~~r~~l~--------~~~--~~i~IiakIEt~~av~nl 296 (547)
-|.+-+-....|..|.. .|.+ -|++|||++.++++.+++.+. +.| .++++-.+||++.|.-..
T Consensus 699 ~peif~~QlrAi~rAa~~~~~~G~~~~~~IMiPmV~t~~E~~~~~~~i~~~~~el~~e~g~~~~~~vG~MiEvPsaal~a 778 (913)
T 1h6z_A 699 YPEIYNMQVRAIIEAAIAVSEEGSSVIPEIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTA 778 (913)
T ss_dssp STTHHHHHHHHHHHHHHHHHTTTCCCCEEEEECCCCSHHHHHHHHHHHHHHHHHHHHHSCSCCCCEEEEEECSHHHHHTH
T ss_pred ChHHHHHHHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEecchHHHHHH
Confidence 34444445555655432 3755 799999999999999998763 223 257899999999999999
Q ss_pred HHHHhhcCEEEEcCCccccc-CCh----------------------------HHHHHHHHHHHHHHHH--cCCcEEEEcC
Q psy6272 297 DEIIMESDGVVLNRIQLAVA-TSV----------------------------EVTFLAQKMIAARCNK--QGKPFLVVGD 345 (547)
Q Consensus 297 deIl~~~DgImIargDLg~e-~~~----------------------------e~v~~~qk~ii~~c~~--~gKPvi~aTq 345 (547)
|+|++.+|++-||-.||..- +++ +-|-...++++++|++ .|+||+++.+
T Consensus 779 d~ia~~~DFfSiGTNDLTQ~tlg~dRd~~~~~l~~y~~~~i~~~dPf~~ld~paV~~lI~~ai~~a~~~~~g~~vgICGE 858 (913)
T 1h6z_A 779 DSIAQKADFFSFGTNDLTQMGCGFSRDDAGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGE 858 (913)
T ss_dssp HHHTTTCSEEEECTTHHHHHHHTCCGGGCHHHHTTTTTTCSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSG
T ss_pred HHHHHhCCEEEEChHHHHHHHhccCCCchHHHHHHHHhccccccCcccccChHHHHHHHHHHHHHHHhcCCCCEEEEcCC
Confidence 99999999999999997641 121 3455677888999997 6999999988
Q ss_pred CCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchH
Q psy6272 346 ILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQA 385 (547)
Q Consensus 346 ~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta 385 (547)
+=-+|.- +.-.+..|.|.+-+| ....
T Consensus 859 ~~gdP~~-------------~~~l~~~Gid~vS~s-p~~V 884 (913)
T 1h6z_A 859 HGGDPAT-------------IGFCHKVGLDYVSCS-PFRV 884 (913)
T ss_dssp GGGCHHH-------------HHHHHHHTCSEEEEC-GGGH
T ss_pred CCCCHHH-------------HHHHHHcCCCEEEEC-chHH
Confidence 4323332 334788899999999 5443
No 32
>2x0s_A Pyruvate phosphate dikinase; transferase, tropical parasite; 3.00A {Trypanosoma brucei}
Probab=96.71 E-value=0.0075 Score=70.12 Aligned_cols=116 Identities=12% Similarity=0.038 Sum_probs=85.0
Q ss_pred EEEEcccCChhhHHHHHHHHH--------hcCC--CceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccc-----cCCh
Q psy6272 255 IIIMSSVTGANSIREMRGMLE--------DHVD--RVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAV-----ATSV 319 (547)
Q Consensus 255 ~I~~sfV~sa~di~~~r~~l~--------~~~~--~i~IiakIEt~~av~nldeIl~~~DgImIargDLg~-----e~~~ 319 (547)
-|++|||++.++++.+++.+. +.+. +++|-.+||++.+.-..|+|++.+|++=||-.||.. +=.-
T Consensus 727 ~IMiPmV~~~~E~~~~~~~v~~~~~~~~~~~g~~~~~~vG~MiEvPsaal~ad~~a~~~DFfSiGTNDLTQ~tlg~DRd~ 806 (913)
T 2x0s_A 727 EIMVPLVGKKEELSLIREEVVKTAEAVITKSGKRVHYTVGTMIEVPRAAVTADSIAQKADFFSFGTNDLTQMGCGFSRDD 806 (913)
T ss_dssp EEEETTCCSHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECSHHHHHTHHHHGGGCSEEEECTTHHHHHHHTCCGGG
T ss_pred EEEeeecCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeHHHHHHHHHHHHHHCCEEEECHhHHHHHHHHHhcCC
Confidence 589999999999998887552 2232 578999999999999999999999999999999743 2210
Q ss_pred ------------------------HHHHHHHHHHHHHHHHcC--CcEEEEcCCCCCCCcccccccCccchhhHHHHHHhC
Q psy6272 320 ------------------------EVTFLAQKMIAARCNKQG--KPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDG 373 (547)
Q Consensus 320 ------------------------e~v~~~qk~ii~~c~~~g--KPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g 373 (547)
+-|....+..++.|++++ +||+++.|+ |... .-+.-.+..|
T Consensus 807 ~~~~~~~y~~~~~~~~dp~~~~~~~~v~~li~~a~~~gr~~~~~i~vgICGE~---~gdP----------~~~~~L~~~G 873 (913)
T 2x0s_A 807 AGPFLRHYGNLGIYAQDPFQSIDQEGIGELVRIAVTKGRRVKPMLKMGICGEH---GGDP----------ATIGFCHKVG 873 (913)
T ss_dssp CHHHHHHHHHHTSSSSCTTTSCCTTTHHHHHHHHHHHHHHHSTTCEEEECSGG---GGCH----------HHHHHHHHHT
T ss_pred chhhhhhhhhccccccCCCchhHHHHHHHHHHHHHHHhhhcCCCCeEEEeCCc---ccCH----------HHHHHHHHcC
Confidence 123344455566666554 689999884 3322 2344578889
Q ss_pred ccEEeeCCcch
Q psy6272 374 ADVVVLTQSEQ 384 (547)
Q Consensus 374 ~D~vmLsk~Et 384 (547)
.|.+-+| ...
T Consensus 874 id~~S~s-P~~ 883 (913)
T 2x0s_A 874 LDYVSCS-PFR 883 (913)
T ss_dssp CSEEEEC-GGG
T ss_pred CCEEEEC-hHH
Confidence 9999999 443
No 33
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.57 E-value=0.044 Score=59.93 Aligned_cols=126 Identities=16% Similarity=0.222 Sum_probs=88.9
Q ss_pred CChhhHHHHHHHHHcCCcEEEEc--ccCChhhHHHHHHHHHhcCCCceEEE-EecCHHHHhhHHHHHhhcCEEEEcCCcc
Q psy6272 237 IADRDKHVVDLIVREAVDIIIMS--SVTGANSIREMRGMLEDHVDRVLILA-KIETLLGMEYMDEIIMESDGVVLNRIQL 313 (547)
Q Consensus 237 lt~~D~~di~~~~~~g~d~I~~s--fV~sa~di~~~r~~l~~~~~~i~Iia-kIEt~~av~nldeIl~~~DgImIargDL 313 (547)
..+.+.+.+...++.|+|+|++- .-.+. .+.+..+++.+...++.||| -+-|.++.++| |-.-+|+|-||-|==
T Consensus 278 v~~d~~eR~~aLv~AGvD~iviD~ahGhs~-~v~~~i~~ik~~~p~~~viaGNVaT~e~a~~L--i~aGAD~vkVGiGpG 354 (556)
T 4af0_A 278 TRPGDKDRLKLLAEAGLDVVVLDSSQGNSV-YQIEFIKWIKQTYPKIDVIAGNVVTREQAAQL--IAAGADGLRIGMGSG 354 (556)
T ss_dssp SSHHHHHHHHHHHHTTCCEEEECCSCCCSH-HHHHHHHHHHHHCTTSEEEEEEECSHHHHHHH--HHHTCSEEEECSSCS
T ss_pred cCccHHHHHHHHHhcCCcEEEEeccccccH-HHHHHHHHHHhhCCcceEEeccccCHHHHHHH--HHcCCCEEeecCCCC
Confidence 35667888889999999999873 22333 33444445555566777776 89999999988 334589999887652
Q ss_pred cc-------cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 314 AV-------ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 314 g~-------e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
++ -+|.+.+- +...+.+.|+++|+|||--..+ --- .|++.|+..|||+|||.
T Consensus 355 SiCtTr~v~GvG~PQ~t-Ai~~~a~~a~~~~vpvIADGGI------~~s--------GDi~KAlaaGAd~VMlG 413 (556)
T 4af0_A 355 SICITQEVMAVGRPQGT-AVYAVAEFASRFGIPCIADGGI------GNI--------GHIAKALALGASAVMMG 413 (556)
T ss_dssp TTBCCTTTCCSCCCHHH-HHHHHHHHHGGGTCCEEEESCC------CSH--------HHHHHHHHTTCSEEEES
T ss_pred cccccccccCCCCcHHH-HHHHHHHHHHHcCCCEEecCCc------Ccc--------hHHHHHhhcCCCEEEEc
Confidence 21 23344444 4445778899999999874432 123 99999999999999998
No 34
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=95.94 E-value=0.18 Score=52.72 Aligned_cols=124 Identities=19% Similarity=0.247 Sum_probs=80.6
Q ss_pred hhhHHHHHHHHHcCCcEEEE--cccCChhhHHHHHHHHHhcCCCceEEE-EecCHHHHhhHHHHHhhcCEEEEc--CCcc
Q psy6272 239 DRDKHVVDLIVREAVDIIIM--SSVTGANSIREMRGMLEDHVDRVLILA-KIETLLGMEYMDEIIMESDGVVLN--RIQL 313 (547)
Q Consensus 239 ~~D~~di~~~~~~g~d~I~~--sfV~sa~di~~~r~~l~~~~~~i~Iia-kIEt~~av~nldeIl~~~DgImIa--rgDL 313 (547)
+.+.+.++.+++.|+|+|.+ ++-.+...++.++.+-+ ...++.+++ .+-|.+..+.+.+ .=+|+|.+| +|--
T Consensus 107 ~~~~~~~~~lieaGvd~I~idta~G~~~~~~~~I~~ik~-~~p~v~Vi~G~v~t~e~A~~a~~--aGAD~I~vG~gpGs~ 183 (366)
T 4fo4_A 107 PGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRA-AYPHLEIIGGNVATAEGARALIE--AGVSAVKVGIGPGSI 183 (366)
T ss_dssp TTCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHH-HCTTCEEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTT
T ss_pred hhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHHHHH-hcCCCceEeeeeCCHHHHHHHHH--cCCCEEEEecCCCCC
Confidence 34577789999999999987 55555544444444333 333567665 5888877666533 238999995 3321
Q ss_pred cc-----cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 314 AV-----ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 314 g~-----e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.. ..+.+.+. +-..+.+.|+..++|||.+..+- .- .|++.++..|||+||+.
T Consensus 184 ~~tr~~~g~g~p~~~-~l~~v~~~~~~~~iPVIA~GGI~------~~--------~di~kala~GAd~V~vG 240 (366)
T 4fo4_A 184 CTTRIVTGVGVPQIT-AIADAAGVANEYGIPVIADGGIR------FS--------GDISKAIAAGASCVMVG 240 (366)
T ss_dssp BCHHHHHCCCCCHHH-HHHHHHHHHGGGTCCEEEESCCC------SH--------HHHHHHHHTTCSEEEES
T ss_pred CCcccccCcccchHH-HHHHHHHHHhhcCCeEEEeCCCC------CH--------HHHHHHHHcCCCEEEEC
Confidence 10 11223332 23346666777899999876632 23 88999999999999998
No 35
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=95.42 E-value=0.16 Score=53.72 Aligned_cols=119 Identities=19% Similarity=0.297 Sum_probs=76.0
Q ss_pred HHHHHHHHHcCCcEEEE--cccCChhhHHHHHHHHHhcCCCceEEE-EecCHHHHhhHHHHHhh-cCEEEEcC--Ccccc
Q psy6272 242 KHVVDLIVREAVDIIIM--SSVTGANSIREMRGMLEDHVDRVLILA-KIETLLGMEYMDEIIME-SDGVVLNR--IQLAV 315 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~--sfV~sa~di~~~r~~l~~~~~~i~Iia-kIEt~~av~nldeIl~~-~DgImIar--gDLg~ 315 (547)
.+.++.+++.|+|+|.+ ++-.+....+.++.+- +.- .+.+++ .+-|.+..+.+ .+. +|+|.++- |....
T Consensus 146 ~e~~~~lveaGvdvIvldta~G~~~~~~e~I~~ik-~~~-~i~Vi~g~V~t~e~A~~a---~~aGAD~I~vG~g~Gs~~~ 220 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIK-SKM-NIDVIVGNVVTEEATKEL---IENGADGIKVGIGPGSICT 220 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCCSBHHHHHHHHHHH-TTC-CCEEEEEEECSHHHHHHH---HHTTCSEEEECC-------
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCcccHHHHHHHHH-hcC-CCeEEEeecCCHHHHHHH---HHcCCCEEEEeCCCCcCcc
Confidence 56688999999999987 6655543334443333 222 577776 67776665544 334 89999963 22110
Q ss_pred -----cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 316 -----ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 316 -----e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
..+.+.+ .+-.++.+.|++.++|||.+..+- .- .|++.++..|||+||+.
T Consensus 221 tr~~~g~g~p~~-~al~~v~~~~~~~~IPVIA~GGI~------~~--------~di~kalalGAd~V~vG 275 (400)
T 3ffs_A 221 TRIVAGVGVPQI-TAIEKCSSVASKFGIPIIADGGIR------YS--------GDIGKALAVGASSVMIG 275 (400)
T ss_dssp --CCSCBCCCHH-HHHHHHHHHHTTTTCCEEEESCCC------SH--------HHHHHHHTTTCSEEEEC
T ss_pred cccccccchhHH-HHHHHHHHHHHhcCCCEEecCCCC------CH--------HHHHHHHHcCCCEEEEC
Confidence 1122333 333446666767799999877743 24 89999999999999997
No 36
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=95.32 E-value=0.32 Score=52.88 Aligned_cols=126 Identities=20% Similarity=0.237 Sum_probs=80.6
Q ss_pred ChhhHHHHHHHHHcCCcEEEEcccCC-hhhHHHHHHHHHhcCCCceEEE-EecCHHHHhhHHHHHhhcCEEEEcCCcccc
Q psy6272 238 ADRDKHVVDLIVREAVDIIIMSSVTG-ANSIREMRGMLEDHVDRVLILA-KIETLLGMEYMDEIIMESDGVVLNRIQLAV 315 (547)
Q Consensus 238 t~~D~~di~~~~~~g~d~I~~sfV~s-a~di~~~r~~l~~~~~~i~Iia-kIEt~~av~nldeIl~~~DgImIargDLg~ 315 (547)
++...+.+...++.|+|.|.+..... ...+.++.+.+.+...++.|++ .+-|.+..+.+.+ .-+|+|.+|-|-=+.
T Consensus 254 ~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~--aGad~i~vg~g~gsi 331 (511)
T 3usb_A 254 TADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIE--AGANVVKVGIGPGSI 331 (511)
T ss_dssp STTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTT
T ss_pred ccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHH--hCCCEEEECCCCccc
Confidence 34557778899999999999864432 2233333333333334455555 6777776655432 237999986443111
Q ss_pred -------cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 316 -------ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 316 -------e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
..+.+.+. +-..+.+.|++.++|||.+..+- -- .|++.|+..|||++|+.
T Consensus 332 ~~~~~~~g~g~p~~~-~l~~v~~~~~~~~iPVIa~GGI~------~~--------~di~kala~GA~~V~vG 388 (511)
T 3usb_A 332 CTTRVVAGVGVPQLT-AVYDCATEARKHGIPVIADGGIK------YS--------GDMVKALAAGAHVVMLG 388 (511)
T ss_dssp CCHHHHHCCCCCHHH-HHHHHHHHHHTTTCCEEEESCCC------SH--------HHHHHHHHTTCSEEEES
T ss_pred cccccccCCCCCcHH-HHHHHHHHHHhCCCcEEEeCCCC------CH--------HHHHHHHHhCchhheec
Confidence 12223333 33456777888899999877643 24 89999999999999998
No 37
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=95.24 E-value=0.31 Score=52.63 Aligned_cols=124 Identities=19% Similarity=0.218 Sum_probs=79.8
Q ss_pred ChhhHHHHHHHHHcCCcEEEEc--ccCChhhHHHHHHHHHhcCCCceEEEE-ecCHHHHhhHHHHHhh-cCEEEEcCCcc
Q psy6272 238 ADRDKHVVDLIVREAVDIIIMS--SVTGANSIREMRGMLEDHVDRVLILAK-IETLLGMEYMDEIIME-SDGVVLNRIQL 313 (547)
Q Consensus 238 t~~D~~di~~~~~~g~d~I~~s--fV~sa~di~~~r~~l~~~~~~i~Iiak-IEt~~av~nldeIl~~-~DgImIargDL 313 (547)
...+.+.++..++.|+|+|.+- +-.+...++.++. +.+...++.|++. +-|.+..+.+ .+. +|+|.+|-|.=
T Consensus 227 ~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~-i~~~~p~~~Vi~g~v~t~e~a~~l---~~aGaD~I~vg~g~G 302 (490)
T 4avf_A 227 GADTGERVAALVAAGVDVVVVDTAHGHSKGVIERVRW-VKQTFPDVQVIGGNIATAEAAKAL---AEAGADAVKVGIGPG 302 (490)
T ss_dssp STTHHHHHHHHHHTTCSEEEEECSCCSBHHHHHHHHH-HHHHCTTSEEEEEEECSHHHHHHH---HHTTCSEEEECSSCS
T ss_pred ccchHHHHHHHhhcccceEEecccCCcchhHHHHHHH-HHHHCCCceEEEeeeCcHHHHHHH---HHcCCCEEEECCCCC
Confidence 3466788899999999999864 3333322333333 3223235677776 7787766554 333 89999964331
Q ss_pred cc-------cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 314 AV-------ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 314 g~-------e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
+. ..|.+.+ .+-.++.+.|++.++|+|.+..+- -. .|++.++..|||++|+.
T Consensus 303 s~~~t~~~~g~g~p~~-~~l~~v~~~~~~~~iPVIa~GGI~------~~--------~di~kal~~GAd~V~vG 361 (490)
T 4avf_A 303 SICTTRIVAGVGVPQI-SAIANVAAALEGTGVPLIADGGIR------FS--------GDLAKAMVAGAYCVMMG 361 (490)
T ss_dssp TTCHHHHHTCBCCCHH-HHHHHHHHHHTTTTCCEEEESCCC------SH--------HHHHHHHHHTCSEEEEC
T ss_pred cCCCccccCCCCccHH-HHHHHHHHHhccCCCcEEEeCCCC------CH--------HHHHHHHHcCCCeeeec
Confidence 11 1222333 333456777777899999987743 23 89999999999999998
No 38
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=95.03 E-value=0.45 Score=51.49 Aligned_cols=124 Identities=19% Similarity=0.242 Sum_probs=79.9
Q ss_pred hhhHHHHHHHHHcCCcEEEEcccC--ChhhHHHHHHHHHhcCCCceEEE-EecCHHHHhhHHHHHhhcCEEEEcCCcccc
Q psy6272 239 DRDKHVVDLIVREAVDIIIMSSVT--GANSIREMRGMLEDHVDRVLILA-KIETLLGMEYMDEIIMESDGVVLNRIQLAV 315 (547)
Q Consensus 239 ~~D~~di~~~~~~g~d~I~~sfV~--sa~di~~~r~~l~~~~~~i~Iia-kIEt~~av~nldeIl~~~DgImIargDLg~ 315 (547)
+.+.+.++..++.|+|.|.+-.-. +...++.++.+- +...++.|++ .+-|.+..+.+.+ .-+|+|.++-|.=+.
T Consensus 230 ~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir-~~~p~~~Vi~g~v~t~e~a~~l~~--aGaD~I~Vg~g~Gs~ 306 (496)
T 4fxs_A 230 PGNEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETR-AAYPHLEIIGGNVATAEGARALIE--AGVSAVKVGIGPGSI 306 (496)
T ss_dssp SCCHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHH-HHCTTCCEEEEEECSHHHHHHHHH--HTCSEEEECSSCCTT
T ss_pred cchHHHHHHHHhccCceEEeccccccchHHHHHHHHHH-HHCCCceEEEcccCcHHHHHHHHH--hCCCEEEECCCCCcC
Confidence 456788899999999999885443 222223333332 2323556666 5888877655532 238999986333221
Q ss_pred c-------CChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 316 A-------TSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 316 e-------~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
. .|.+.+ .+-.++.+.|++.++|+|.+..+- -. .|++.++..|||++|+.
T Consensus 307 ~~tr~~~g~g~p~~-~~i~~v~~~~~~~~iPVIa~GGI~------~~--------~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 307 CTTRIVTGVGVPQI-TAIADAAGVANEYGIPVIADGGIR------FS--------GDISKAIAAGASCVMVG 363 (496)
T ss_dssp BCHHHHHCCCCCHH-HHHHHHHHHHGGGTCCEEEESCCC------SH--------HHHHHHHHTTCSEEEES
T ss_pred cccccccCCCccHH-HHHHHHHHHhccCCCeEEEeCCCC------CH--------HHHHHHHHcCCCeEEec
Confidence 1 122222 333557777888899999877643 23 89999999999999998
No 39
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=94.95 E-value=0.46 Score=49.43 Aligned_cols=119 Identities=19% Similarity=0.292 Sum_probs=75.4
Q ss_pred HHHHHHHHHcCCcEEEE--cccCChhhHHHHHHHHHhcCCCceEEE-EecCHHHHhhHHHHHhh-cCEEEEc--CCcccc
Q psy6272 242 KHVVDLIVREAVDIIIM--SSVTGANSIREMRGMLEDHVDRVLILA-KIETLLGMEYMDEIIME-SDGVVLN--RIQLAV 315 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~--sfV~sa~di~~~r~~l~~~~~~i~Iia-kIEt~~av~nldeIl~~-~DgImIa--rgDLg~ 315 (547)
.+.++.+++.|+|+|.+ ++-.+...++.++..-+.. ++.+++ .+-|.+..+.+ ++. +|+|.++ +|....
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G~~~~~~~~i~~i~~~~--~~~Vivg~v~t~e~A~~l---~~aGaD~I~VG~~~Gs~~~ 181 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKM--NIDVIVGNVVTEEATKEL---IENGADGIKVGIGPGSICT 181 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCSBHHHHHHHHHHHHHC--CCEEEEEEECSHHHHHHH---HHTTCSEEEECSSCCTTCC
T ss_pred HHHHHHHHHcCcCeEEEeCCCCCcHHHHHHHHHHHHhc--CCcEEEccCCCHHHHHHH---HHcCcCEEEEecCCCcCCC
Confidence 66788899999999987 4333332233333333222 567775 78777766554 334 7999996 332110
Q ss_pred -----cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 316 -----ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 316 -----e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
..+.+.+ .+-.++.+.++..++|||.+..+- .- .|++.++..|||+||+.
T Consensus 182 tr~~~g~g~p~~-~~i~~v~~~~~~~~iPVIA~GGI~------~~--------~di~kala~GAd~V~vG 236 (361)
T 3khj_A 182 TRIVAGVGVPQI-TAIEKCSSVASKFGIPIIADGGIR------YS--------GDIGKALAVGASSVMIG 236 (361)
T ss_dssp HHHHTCBCCCHH-HHHHHHHHHHHHHTCCEEEESCCC------SH--------HHHHHHHHHTCSEEEES
T ss_pred cccccCCCCCcH-HHHHHHHHHHhhcCCeEEEECCCC------CH--------HHHHHHHHcCCCEEEEC
Confidence 1122233 233446666777899999876632 23 88999999999999997
No 40
>1jqo_A Phosphoenolpyruvate carboxylase; beta barrel, carbon dioxide fixation, lyase; 3.00A {Zea mays} SCOP: c.1.12.3
Probab=94.94 E-value=0.12 Score=60.27 Aligned_cols=106 Identities=9% Similarity=0.075 Sum_probs=89.2
Q ss_pred ChhhHHHHHHHHHcC---CcEEEEcccCChhhHHHHHHHHHhcC--CCceEEEEecCHHHHhhHHHHHhhc---------
Q psy6272 238 ADRDKHVVDLIVREA---VDIIIMSSVTGANSIREMRGMLEDHV--DRVLILAKIETLLGMEYMDEIIMES--------- 303 (547)
Q Consensus 238 t~~D~~di~~~~~~g---~d~I~~sfV~sa~di~~~r~~l~~~~--~~i~IiakIEt~~av~nldeIl~~~--------- 303 (547)
+.+-...+..+.+.| +..+++||.+++.|+-++--+..+.| ..+.|+.-.||.+.++|.++|+...
T Consensus 511 ~~evL~~f~~i~~~g~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VVPLFETi~DL~~a~~im~~ll~~p~yr~~ 590 (970)
T 1jqo_A 511 IADVIGAFHVLAELPPDSFGPYIISMATAPSDVLAVELLQRECGVRQPLPVVPLFERLADLQSAPASVERLFSVDWYMDR 590 (970)
T ss_dssp HHHHHHHHHHHHHSCSTTEEEEEETTCCSTHHHHHHHHHHHHTCCSSCCCEEEEECSHHHHHTHHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHHHHHhChhhhCeEEeCCCCCHHHHHHHHHHHHHcCCCCCCCeeCCCCCHHHHHhHHHHHHHHHhChHHHHh
Confidence 334444555666666 44679999999999999999988877 4689999999999999999999872
Q ss_pred ----CEEEEcCCcccccCCh----HHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 304 ----DGVVLNRIQLAVATSV----EVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 304 ----DgImIargDLg~e~~~----e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
--||+|..|=+.+-|+ -.+..+|.++.+.|+++|+++...
T Consensus 591 l~~~QeVMLGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lF 638 (970)
T 1jqo_A 591 IKGKQQVMVGYSDSGKDAGRLSAAWQLYRAQEEMAQVAKRYGVKLTLF 638 (970)
T ss_dssp HTSEEEEEEESTTHHHHSCHHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred hCCeEEEEEecccccccccHHHHHHHHHHHHHHHHHHHHHcCCcEEEe
Confidence 2699999999999998 478889999999999999998764
No 41
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=94.65 E-value=0.15 Score=48.84 Aligned_cols=110 Identities=15% Similarity=0.144 Sum_probs=73.2
Q ss_pred ChhhHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCCCCCEEEEeCc------------hhccccccccccceEEee
Q psy6272 421 DPAHSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSSL------------GYVCRHLNVYRNIRPLHY 488 (547)
Q Consensus 421 ~~~~~ia~aav~~a~~~~a~aIvv~T~sG~tA~~isk~RP~~pIiavt~~------------~~~ar~l~l~~GV~p~~~ 488 (547)
..++.....|++.|.+++.+-|||.|.||.||..+...-....+++||+. +.+.+.| --.|+--+-.
T Consensus 26 eNT~~tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L-~~~G~~V~t~ 104 (201)
T 1vp8_A 26 ENTEETLRLAVERAKELGIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEEL-RKRGAKIVRQ 104 (201)
T ss_dssp GGHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHH-HHTTCEEEEC
T ss_pred ccHHHHHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHH-HhCCCEEEEE
Confidence 45678888999999999999999999999999999887777899999952 2232222 2223322221
Q ss_pred cCCCCCC--------CC-CCHHHHHHHHHH---------------HHHHcCCCCCCCeEEEEecccCCC
Q psy6272 489 IRNPQAD--------WS-MDVDCRVQFAIQ---------------HGMEIGIISPGDPLVLINGWRKGA 533 (547)
Q Consensus 489 ~~~~~~~--------~~-~d~d~~I~~a~~---------------~~k~~g~~~~Gd~vvvv~g~~~g~ 533 (547)
.. ..+. |. -..-+.+..++. .+.+.|++.. +.||.+.|...|.
T Consensus 105 tH-~lsgveR~is~kfGG~~p~eiiA~tLR~~fgqG~KV~vEi~lMAaDAGlIp~-eeVIAiGGT~~Ga 171 (201)
T 1vp8_A 105 SH-ILSGLERSISRKLGGVSRTEAIAEALRSLFGHGLKVCVEITIMAADSGAIPI-EEVVAVGGRSRGA 171 (201)
T ss_dssp CC-TTTTTHHHHHHHTCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTSSCS-SCEEEEECSSSSC
T ss_pred ec-cccchhHHHHHhcCCCCHHHHHHHHHHHHhcCCceEEEEEeeeecccCCCCc-ceEEEEccccCCc
Confidence 11 1100 00 123344555555 3568999999 9998898877663
No 42
>3odm_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta-barrel, lyase; 2.95A {Clostridium perfringens}
Probab=94.59 E-value=0.1 Score=57.04 Aligned_cols=92 Identities=15% Similarity=0.227 Sum_probs=77.6
Q ss_pred cCCcEEEEcccCChhhHHHHHHHHHh--------cC-----CCceEEEEecCHHHHhhHHHHHhh--c-----------C
Q psy6272 251 EAVDIIIMSSVTGANSIREMRGMLED--------HV-----DRVLILAKIETLLGMEYMDEIIME--S-----------D 304 (547)
Q Consensus 251 ~g~d~I~~sfV~sa~di~~~r~~l~~--------~~-----~~i~IiakIEt~~av~nldeIl~~--~-----------D 304 (547)
..+-.+++||.++++|+.++..++.+ .+ ..+.|+.-+||.+.+.|.++|+.. . -
T Consensus 138 ~aI~~yIISMT~sasDlL~V~~L~k~~aGL~~~e~g~~~~~~~i~VVPLFETieDL~~a~~Il~~ll~~~r~l~~~~~~Q 217 (560)
T 3odm_A 138 PAISEVVVPMIETGKEISEFQDRVNSVVDMGNKNYKTKLDLNSVRIIPLVEDVPALANIDRILDEHYEIEKSKGHILKDL 217 (560)
T ss_dssp CSCCEEEESSCCSHHHHHHHHHHHHHHHHHHHHHCSSCCCTTSSEEEEEECCHHHHHTTHHHHHHHHHHHHHTTCCCSEE
T ss_pred cccCeEEecCCCCHHHHHHHHHHHHHHhcccccccCCCCCCCCCCeECCcCCHHHHHhhHHHHHHHHHHHHHhcccCCeE
Confidence 34667999999999999999777632 12 267899999999999999999876 1 2
Q ss_pred EEEEcCCcccccCCh----HHHHHHHHHHHHHHHHcCCcEEE
Q psy6272 305 GVVLNRIQLAVATSV----EVTFLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 305 gImIargDLg~e~~~----e~v~~~qk~ii~~c~~~gKPvi~ 342 (547)
-||+|+.|=+.+-|+ -.+..||.++.+.|+++|+++-.
T Consensus 218 eVMLGYSDSaKDgG~laS~waly~Aq~~L~~~~~e~gI~l~l 259 (560)
T 3odm_A 218 RIMIARSDTAMSYGLISGVLSVLMAVDGAYKWGEKHGVTISP 259 (560)
T ss_dssp EEEEESHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred EEEEeeccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCcEEE
Confidence 799999999999997 46788999999999999999765
No 43
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=94.44 E-value=0.09 Score=50.42 Aligned_cols=48 Identities=17% Similarity=0.148 Sum_probs=42.2
Q ss_pred ChhhHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCCCCCEEEEeC
Q psy6272 421 DPAHSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAVSS 469 (547)
Q Consensus 421 ~~~~~ia~aav~~a~~~~a~aIvv~T~sG~tA~~isk~RP~~pIiavt~ 469 (547)
..++.....|++.|.+++.+-|||.|.||.||..+...-.. .+++||+
T Consensus 34 eNT~~tl~la~era~e~~Ik~iVVASssG~TA~k~~e~~~~-~lVvVTh 81 (206)
T 1t57_A 34 ENTERVLELVGERADQLGIRNFVVASVSGETALRLSEMVEG-NIVSVTH 81 (206)
T ss_dssp GGHHHHHHHHHHHHHHHTCCEEEEECSSSHHHHHHHTTCCS-EEEEECC
T ss_pred ccHHHHHHHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHccC-CEEEEeC
Confidence 34678888999999999999999999999999999886655 8999995
No 44
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=94.25 E-value=0.4 Score=48.87 Aligned_cols=111 Identities=14% Similarity=0.245 Sum_probs=72.4
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEE-cCCcccccCC-
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVL-NRIQLAVATS- 318 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImI-argDLg~e~~- 318 (547)
.+.++.+++.|+|+|.+++=...+-++.+++ . .+.++.++.+.+-.+.+ .+. +|+|.+ |+ +-|-..|
T Consensus 78 ~~~~~~a~~~g~d~V~~~~g~p~~~i~~l~~----~--g~~v~~~v~~~~~a~~~---~~~GaD~i~v~g~-~~GG~~g~ 147 (332)
T 2z6i_A 78 EDIVDLVIEEGVKVVTTGAGNPSKYMERFHE----A--GIIVIPVVPSVALAKRM---EKIGADAVIAEGM-EAGGHIGK 147 (332)
T ss_dssp HHHHHHHHHTTCSEEEECSSCGGGTHHHHHH----T--TCEEEEEESSHHHHHHH---HHTTCSCEEEECT-TSSEECCS
T ss_pred HHHHHHHHHCCCCEEEECCCChHHHHHHHHH----c--CCeEEEEeCCHHHHHHH---HHcCCCEEEEECC-CCCCCCCC
Confidence 3557889999999999988655555555553 2 57899999887655443 333 799998 43 2222222
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 319 VEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 319 ~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
...+..+ +++ ....++||+.+..+- .- .|+..++..|+|+|++.
T Consensus 148 ~~~~~ll-~~i---~~~~~iPViaaGGI~------~~--------~~~~~al~~GAdgV~vG 191 (332)
T 2z6i_A 148 LTTMTLV-RQV---ATAISIPVIAAGGIA------DG--------EGAAAGFMLGAEAVQVG 191 (332)
T ss_dssp SCHHHHH-HHH---HHHCSSCEEEESSCC------SH--------HHHHHHHHTTCSEEEEC
T ss_pred ccHHHHH-HHH---HHhcCCCEEEECCCC------CH--------HHHHHHHHcCCCEEEec
Confidence 1122111 122 234589999987742 12 67888888999999998
No 45
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=94.06 E-value=0.69 Score=48.23 Aligned_cols=120 Identities=15% Similarity=0.231 Sum_probs=73.3
Q ss_pred hhhHHHHHHHHHcCCcEEEE--cccCChhhHHHHHHHHHhcCCCceEEEE-ecCHHHHhhHHHHHhhcCEEEEcCCc--c
Q psy6272 239 DRDKHVVDLIVREAVDIIIM--SSVTGANSIREMRGMLEDHVDRVLILAK-IETLLGMEYMDEIIMESDGVVLNRIQ--L 313 (547)
Q Consensus 239 ~~D~~di~~~~~~g~d~I~~--sfV~sa~di~~~r~~l~~~~~~i~Iiak-IEt~~av~nldeIl~~~DgImIargD--L 313 (547)
+.+.+.++.+++.|+|+|.+ ++-. .+.+.+..+.+.+...++.|+++ +-|.+....+.+ .=+|+|.++-+- -
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G~-~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~--aGaD~I~Vg~g~G~~ 175 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHAH-AKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLAS--CGADIIKAGIGGGSV 175 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCCS-SHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHH--TTCSEEEECCSSSSC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCCC-cHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHH--cCCCEEEEcCCCCcC
Confidence 55677889999999999988 3322 22222222333332236889995 888776554422 238999995221 1
Q ss_pred cc-----cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 314 AV-----ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 314 g~-----e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.. ..+.+ |-..+..|.++.+|||....+- .- .|++.++..|||+||+.
T Consensus 176 ~~tr~~~g~g~p-----~l~aI~~~~~~~~PVIAdGGI~------~~--------~di~kALa~GAd~V~iG 228 (361)
T 3r2g_A 176 CSTRIKTGFGVP-----MLTCIQDCSRADRSIVADGGIK------TS--------GDIVKALAFGADFVMIG 228 (361)
T ss_dssp HHHHHHHCCCCC-----HHHHHHHHTTSSSEEEEESCCC------SH--------HHHHHHHHTTCSEEEES
T ss_pred ccccccCCccHH-----HHHHHHHHHHhCCCEEEECCCC------CH--------HHHHHHHHcCCCEEEEC
Confidence 00 01222 2233444544445999876632 23 89999999999999998
No 46
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=93.82 E-value=1.2 Score=48.20 Aligned_cols=120 Identities=18% Similarity=0.251 Sum_probs=76.0
Q ss_pred hhHHHHHHHHHcCCcEEEE--cccCCh---hhHHHHHHHHHhcCCCceEEEE-ecCHHHHhhHHHHHhhcCEEEEcC--C
Q psy6272 240 RDKHVVDLIVREAVDIIIM--SSVTGA---NSIREMRGMLEDHVDRVLILAK-IETLLGMEYMDEIIMESDGVVLNR--I 311 (547)
Q Consensus 240 ~D~~di~~~~~~g~d~I~~--sfV~sa---~di~~~r~~l~~~~~~i~Iiak-IEt~~av~nldeIl~~~DgImIar--g 311 (547)
...+.++.+++.|+|+|.+ ++-... +.++.+++.. .++.|+++ +.|.+....+.+. =+|+|.++. |
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~~i~~i~~~~----~~~pvi~~~v~t~~~a~~l~~a--Gad~I~vg~~~G 328 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQGNSVYQIAMVHYIKQKY----PHLQVIGGNVVTAAQAKNLIDA--GVDGLRVGMGCG 328 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCCSHHHHHHHHHHHHHC----TTCEEEEEEECSHHHHHHHHHH--TCSEEEECSSCS
T ss_pred hhHHHHHHHHHcCCCEEEeeccCCcchhHHHHHHHHHHhC----CCCceEecccchHHHHHHHHHc--CCCEEEECCCCC
Confidence 4577788899999999998 432222 3334444332 35788875 8887776655431 289999954 3
Q ss_pred cccc-----cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 312 QLAV-----ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 312 DLg~-----e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
-... ..|.+. ......+-+.++..++|||.+..+- .- .|++.++..|||++++.
T Consensus 329 ~~~~t~~~~~~g~~~-~~~~~~~~~~~~~~~ipVia~GGI~------~~--------~di~kala~GAd~V~iG 387 (514)
T 1jcn_A 329 SICITQEVMACGRPQ-GTAVYKVAEYARRFGVPIIADGGIQ------TV--------GHVVKALALGASTVMMG 387 (514)
T ss_dssp CCBTTBCCCSCCCCH-HHHHHHHHHHHGGGTCCEEEESCCC------SH--------HHHHHHHHTTCSEEEES
T ss_pred cccccccccCCCccc-hhHHHHHHHHHhhCCCCEEEECCCC------CH--------HHHHHHHHcCCCeeeEC
Confidence 1100 012221 2223334555666799999877642 23 89999999999999998
No 47
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=93.78 E-value=0.64 Score=43.63 Aligned_cols=116 Identities=13% Similarity=0.083 Sum_probs=71.4
Q ss_pred HHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCH-HHHhhHHHHHhh-cCEEEEcCCcccccCChHH
Q psy6272 244 VVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETL-LGMEYMDEIIME-SDGVVLNRIQLAVATSVEV 321 (547)
Q Consensus 244 di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~-~av~nldeIl~~-~DgImIargDLg~e~~~e~ 321 (547)
.++.+.+.|+|+|.++-....+++.++.+.+.+.|.. ++.-+-++ ...+.+..+.+. +|.|.+.+|-=+...+...
T Consensus 69 ~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~t~~~~~~~~~~~g~d~i~v~~g~~g~~~~~~~ 146 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQ--VVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGRKP 146 (211)
T ss_dssp HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCE--EEEECTTCSSHHHHHHHHHHHTCCEEEEECCHHHHHTTCCS
T ss_pred HHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCe--EEEEecCCCCHHHHHHHHHHcCCCEEEEcCCCcccccCCCC
Confidence 4889999999999998765557788888888776543 33322112 224556777777 7998887663222222111
Q ss_pred HHHHHHHHHHHHHHc-CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 322 TFLAQKMIAARCNKQ-GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 322 v~~~qk~ii~~c~~~-gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
+.. +-+..+.. +.|+++...+ . . .++..+...|+|++...
T Consensus 147 ~~~----i~~l~~~~~~~~i~~~gGI--~-----~--------~~~~~~~~~Gad~vvvG 187 (211)
T 3f4w_A 147 IDD----LITMLKVRRKARIAVAGGI--S-----S--------QTVKDYALLGPDVVIVG 187 (211)
T ss_dssp HHH----HHHHHHHCSSCEEEEESSC--C-----T--------TTHHHHHTTCCSEEEEC
T ss_pred HHH----HHHHHHHcCCCcEEEECCC--C-----H--------HHHHHHHHcCCCEEEEC
Confidence 111 11112222 6888876553 1 2 55666788899999997
No 48
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=93.36 E-value=0.83 Score=46.52 Aligned_cols=113 Identities=14% Similarity=0.231 Sum_probs=72.8
Q ss_pred hHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccccCC-
Q psy6272 241 DKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAVATS- 318 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~e~~- 318 (547)
..+.++.+++.|+|+|.+++=...+.++.+++ . .++++.++-+.+-...+ .+. +|+|.+--.+.|-..|
T Consensus 91 ~~~~~~~~~~~g~d~V~l~~g~p~~~~~~l~~----~--g~~v~~~v~s~~~a~~a---~~~GaD~i~v~g~~~GG~~G~ 161 (326)
T 3bo9_A 91 ADDLVKVCIEEKVPVVTFGAGNPTKYIRELKE----N--GTKVIPVVASDSLARMV---ERAGADAVIAEGMESGGHIGE 161 (326)
T ss_dssp HHHHHHHHHHTTCSEEEEESSCCHHHHHHHHH----T--TCEEEEEESSHHHHHHH---HHTTCSCEEEECTTSSEECCS
T ss_pred HHHHHHHHHHCCCCEEEECCCCcHHHHHHHHH----c--CCcEEEEcCCHHHHHHH---HHcCCCEEEEECCCCCccCCC
Confidence 35667888999999999988655444444433 2 57888998776655443 333 7999993222332222
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 319 VEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 319 ~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
...+..++ ++ ++..++||+.+..+- .. .|++.++..|+|++++.
T Consensus 162 ~~~~~ll~-~i---~~~~~iPviaaGGI~------~~--------~dv~~al~~GA~gV~vG 205 (326)
T 3bo9_A 162 VTTFVLVN-KV---SRSVNIPVIAAGGIA------DG--------RGMAAAFALGAEAVQMG 205 (326)
T ss_dssp SCHHHHHH-HH---HHHCSSCEEEESSCC------SH--------HHHHHHHHHTCSEEEES
T ss_pred ccHHHHHH-HH---HHHcCCCEEEECCCC------CH--------HHHHHHHHhCCCEEEec
Confidence 12222222 12 234589999987732 13 78899999999999998
No 49
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=93.16 E-value=0.54 Score=46.47 Aligned_cols=118 Identities=10% Similarity=0.112 Sum_probs=73.4
Q ss_pred HHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEc---CCcccccCChH
Q psy6272 244 VVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLN---RIQLAVATSVE 320 (547)
Q Consensus 244 di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIa---rgDLg~e~~~e 320 (547)
.++.+.+.|+|+|.+.. +..+++.+..+.+.+.|....+...=.| -++.+++++...|.|++- ||==|.... +
T Consensus 101 ~i~~~~~aGAd~itvH~-Ea~~~~~~~i~~ir~~G~k~Gvalnp~T--p~e~l~~~l~~vD~VlvMsV~PGfgGQ~fi-~ 176 (246)
T 3inp_A 101 LIESFAKAGATSIVFHP-EASEHIDRSLQLIKSFGIQAGLALNPAT--GIDCLKYVESNIDRVLIMSVNPGFGGQKFI-P 176 (246)
T ss_dssp HHHHHHHHTCSEEEECG-GGCSCHHHHHHHHHTTTSEEEEEECTTC--CSGGGTTTGGGCSEEEEECSCTTC--CCCC-T
T ss_pred HHHHHHHcCCCEEEEcc-ccchhHHHHHHHHHHcCCeEEEEecCCC--CHHHHHHHHhcCCEEEEeeecCCCCCcccc-h
Confidence 57888899999999985 4446788888888877776666544344 557888889889988763 331121111 2
Q ss_pred HHHHHHHHHHHHHHHcC--CcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 321 VTFLAQKMIAARCNKQG--KPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 321 ~v~~~qk~ii~~c~~~g--KPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
....-.+++-+.+.+.| .++-+...+ .| ..+..++..|||.++..
T Consensus 177 ~~l~KI~~lr~~~~~~~~~~~I~VDGGI--~~-------------~ti~~~~~aGAD~~V~G 223 (246)
T 3inp_A 177 AMLDKAKEISKWISSTDRDILLEIDGGV--NP-------------YNIAEIAVCGVNAFVAG 223 (246)
T ss_dssp THHHHHHHHHHHHHHHTSCCEEEEESSC--CT-------------TTHHHHHTTTCCEEEES
T ss_pred HHHHHHHHHHHHHHhcCCCeeEEEECCc--CH-------------HHHHHHHHcCCCEEEEe
Confidence 22222233444444444 555554443 22 33455678899999986
No 50
>1jqn_A Pepcase, PEPC, phosphoenolpyruvate carboxylase; beta barrel, Mn2+ and DCDP complex, lyase; HET: DCO; 2.35A {Escherichia coli} SCOP: c.1.12.3 PDB: 1fiy_A* 1qb4_A
Probab=92.87 E-value=0.31 Score=56.31 Aligned_cols=102 Identities=14% Similarity=0.220 Sum_probs=85.9
Q ss_pred HHHHHHHHHc---CCcEEEEcccCChhhHHHHHHHHHhcCC--CceEEEEecCHHHHhhHHHHHhhc-------------
Q psy6272 242 KHVVDLIVRE---AVDIIIMSSVTGANSIREMRGMLEDHVD--RVLILAKIETLLGMEYMDEIIMES------------- 303 (547)
Q Consensus 242 ~~di~~~~~~---g~d~I~~sfV~sa~di~~~r~~l~~~~~--~i~IiakIEt~~av~nldeIl~~~------------- 303 (547)
..-+..+.+. .+..+++||.+++.|+-++--+..+.|- .+.|+.-.||.+.++|.++|+...
T Consensus 455 L~~f~~i~~~~~~a~~~yIISmt~s~sDvL~V~~L~ke~Gl~~~l~VvPLFETi~DL~~a~~im~~ll~~p~yr~~l~~~ 534 (883)
T 1jqn_A 455 LDTCQVIAEAPQGSIAAYVISMAKTPSDVLAVHLLLKEAGIGFAMPVAPLFETLDDLNNANDVMTQLLNIDWYRGLIQGK 534 (883)
T ss_dssp HHHHHHHHHSCTTSEEEEEEETCCSHHHHHHHHHHHHTTTCCSCCCEEEEECSHHHHHHHHHHHHHHHHSHHHHHHTTTE
T ss_pred HHHHHHHHHhhhhhcCeEEeCCCCCHHHHHHHHHHHHHhCCCCCcCeeCCCCCHHHHHhHHHHHHHHHhChHHHHhhCCe
Confidence 3334444444 4667899999999999999999888773 688999999999999999999872
Q ss_pred CEEEEcCCcccccCCh----HHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 304 DGVVLNRIQLAVATSV----EVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 304 DgImIargDLg~e~~~----e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
--||+|..|=+.+-|+ -.+..+|.++.+.|+++|+++...
T Consensus 535 qeVMlGYSDS~KD~G~laA~w~ly~Aq~~L~~v~~~~gV~l~lF 578 (883)
T 1jqn_A 535 QMVMIGYSDSAKDAGVMAASWAQYQAQDALIKTCEKAGIELTLF 578 (883)
T ss_dssp EEEEECHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEEEeeccccccccHHHHHHHHHHHHHHHHHHHHHcCCeEEEe
Confidence 2699999999998887 478889999999999999998764
No 51
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=92.76 E-value=1.3 Score=45.83 Aligned_cols=123 Identities=18% Similarity=0.105 Sum_probs=72.8
Q ss_pred hhHHHHHHHHHc--CCcEEEEccc-CChhhHHHHHHHHHhcCCCceEEEE-ecCHHHHhhHHHHHhh-cCEEEEcCCccc
Q psy6272 240 RDKHVVDLIVRE--AVDIIIMSSV-TGANSIREMRGMLEDHVDRVLILAK-IETLLGMEYMDEIIME-SDGVVLNRIQLA 314 (547)
Q Consensus 240 ~D~~di~~~~~~--g~d~I~~sfV-~sa~di~~~r~~l~~~~~~i~Iiak-IEt~~av~nldeIl~~-~DgImIargDLg 314 (547)
.+.+.+...++. |+|++.+..- ....++.+.-+.+.+...++.|+++ +-|.+-.+.+ .+. +|+|.++-|-=+
T Consensus 118 ~~~~~~~~l~~~~~g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a---~~aGaD~I~v~~g~G~ 194 (351)
T 2c6q_A 118 SDFEQLEQILEAIPQVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEEL---ILSGADIIKVGIGPGS 194 (351)
T ss_dssp HHHHHHHHHHHHCTTCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHH---HHTTCSEEEECSSCST
T ss_pred HHHHHHHHHHhccCCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHH---HHhCCCEEEECCCCCc
Confidence 455667777776 8998876532 1223333333333333335666654 6665544333 334 799988642100
Q ss_pred cc-------CChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 315 VA-------TSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 315 ~e-------~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.+ .+.+.+ .+-..+.+.|+..++|||.+..+. .- .|++.|+..|||+|++.
T Consensus 195 ~~~~r~~~g~~~p~~-~~l~~v~~~~~~~~ipvIa~GGI~------~g--------~di~kAlalGA~~V~vG 252 (351)
T 2c6q_A 195 VCTTRKKTGVGYPQL-SAVMECADAAHGLKGHIISDGGCS------CP--------GDVAKAFGAGADFVMLG 252 (351)
T ss_dssp TBCHHHHHCBCCCHH-HHHHHHHHHHHHTTCEEEEESCCC------SH--------HHHHHHHHTTCSEEEES
T ss_pred CcCccccCCCCccHH-HHHHHHHHHHhhcCCcEEEeCCCC------CH--------HHHHHHHHcCCCceecc
Confidence 01 122222 223346666777899999987743 24 89999999999999998
No 52
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=92.70 E-value=2.1 Score=45.45 Aligned_cols=108 Identities=19% Similarity=0.242 Sum_probs=64.5
Q ss_pred Cce-EEEEecCHHHHhhHHHHHhh-----cCEEEEcCC-----cc---cccC----ChHHHHHHHHHHHHHHHHc--CCc
Q psy6272 280 RVL-ILAKIETLLGMEYMDEIIME-----SDGVVLNRI-----QL---AVAT----SVEVTFLAQKMIAARCNKQ--GKP 339 (547)
Q Consensus 280 ~i~-IiakIEt~~av~nldeIl~~-----~DgImIarg-----DL---g~e~----~~e~v~~~qk~ii~~c~~~--gKP 339 (547)
+.. |++||=--..-+++.+|++. +|||.+.-. |+ +.+. |....+.+.+.+-+..++. .+|
T Consensus 268 ~~P~V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iP 347 (415)
T 3i65_A 268 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIP 347 (415)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSC
T ss_pred CCCeEEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCC
Confidence 466 89999532223356666665 599987621 21 1111 2233344444344444444 589
Q ss_pred EEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHhhhh
Q psy6272 340 FLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESV 402 (547)
Q Consensus 340 vi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~aE~~ 402 (547)
+|....+. .. .|+..++..|||+|++. .--..+--.++.+|.++.+..
T Consensus 348 IIg~GGI~------s~--------eDa~e~l~aGAd~VqIg-ra~l~~GP~~~~~i~~~L~~~ 395 (415)
T 3i65_A 348 IIASGGIF------SG--------LDALEKIEAGASVCQLY-SCLVFNGMKSAVQIKRELNHL 395 (415)
T ss_dssp EEECSSCC------SH--------HHHHHHHHHTEEEEEES-HHHHHHGGGHHHHHHHHHHHH
T ss_pred EEEECCCC------CH--------HHHHHHHHcCCCEEEEc-HHHHhcCHHHHHHHHHHHHHH
Confidence 99877643 24 88899999999999998 332224345666676666654
No 53
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=92.54 E-value=2.4 Score=43.67 Aligned_cols=113 Identities=14% Similarity=0.215 Sum_probs=69.5
Q ss_pred HHHHHHHHHcCCcEEEEcccCC-hhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEE-cCC---ccccc
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTG-ANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVL-NRI---QLAVA 316 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~s-a~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImI-arg---DLg~e 316 (547)
.+.++.+++.|+|+|.+++=.. .+.++.+++ ..+.++.++-|.+-...+.+ .-+|+|.+ ++. ..+..
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~~~~~~i~~~~~------~g~~v~~~v~t~~~a~~a~~--~GaD~i~v~g~~~GGh~g~~ 183 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGVPDREVIARLRR------AGTLTLVTATTPEEARAVEA--AGADAVIAQGVEAGGHQGTH 183 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSCCCHHHHHHHHH------TTCEEEEEESSHHHHHHHHH--TTCSEEEEECTTCSEECCCS
T ss_pred HHHHHHHHhcCCCEEEEeCCCCcHHHHHHHHH------CCCeEEEECCCHHHHHHHHH--cCCCEEEEeCCCcCCcCCCc
Confidence 5567889999999999987542 345555443 24678888877654332221 12799999 642 11211
Q ss_pred CC--------hHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 317 TS--------VEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 317 ~~--------~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.+ ...+..+. ++ ....++||+.+..+- .- .|+..++..|+|+|++.
T Consensus 184 ~~~~~~~~~~~~~~~~l~-~i---~~~~~iPViaaGGI~------~~--------~~~~~~l~~GAd~V~vG 237 (369)
T 3bw2_A 184 RDSSEDDGAGIGLLSLLA-QV---REAVDIPVVAAGGIM------RG--------GQIAAVLAAGADAAQLG 237 (369)
T ss_dssp SCCGGGTTCCCCHHHHHH-HH---HHHCSSCEEEESSCC------SH--------HHHHHHHHTTCSEEEES
T ss_pred ccccccccccccHHHHHH-HH---HHhcCceEEEECCCC------CH--------HHHHHHHHcCCCEEEEC
Confidence 10 11122221 12 223589999987742 13 77888899999999998
No 54
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=92.28 E-value=3.1 Score=41.48 Aligned_cols=144 Identities=11% Similarity=0.014 Sum_probs=79.7
Q ss_pred HHHHHHHHHcCCc-EEEEccc-----------CChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-----cC
Q psy6272 242 KHVVDLIVREAVD-IIIMSSV-----------TGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-----SD 304 (547)
Q Consensus 242 ~~di~~~~~~g~d-~I~~sfV-----------~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-----~D 304 (547)
.+..+.+.+.|+| +|-+.+- .+.+.+.++-+.+.+. -++.++.|+=.--..+++.++++. +|
T Consensus 109 ~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~-~~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d 187 (311)
T 1jub_A 109 IAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTF-FTKPLGVKLPPYFDLVHFDIMAEILNQFPLT 187 (311)
T ss_dssp HHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCCSHHHHHHHHHHHTTSCCC
T ss_pred HHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHh-cCCCEEEEECCCCCHHHHHHHHHHHHHcCCc
Confidence 4445677789999 9988652 1444444444444332 257899998422122344444443 48
Q ss_pred EEEEcCCc---cccc-------------C----ChHHHHHHHHHHHHHHHH-c--CCcEEEEcCCCCCCCcccccccCcc
Q psy6272 305 GVVLNRIQ---LAVA-------------T----SVEVTFLAQKMIAARCNK-Q--GKPFLVVGDILPDHNVEEYSDVSIG 361 (547)
Q Consensus 305 gImIargD---Lg~e-------------~----~~e~v~~~qk~ii~~c~~-~--gKPvi~aTq~Le~PtraE~~~~~~~ 361 (547)
+|.+.-.- +.++ . |....+.... .++.+++ . ++||+....+- ..
T Consensus 188 ~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~-~i~~v~~~~~~~ipvi~~GGI~------~~------ 254 (311)
T 1jub_A 188 YVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALA-NVRAFYTRLKPEIQIIGTGGIE------TG------ 254 (311)
T ss_dssp EEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHH-HHHHHHTTSCTTSEEEEESSCC------SH------
T ss_pred EEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHH-HHHHHHHhcCCCCCEEEECCCC------CH------
Confidence 88764210 0010 0 2222233333 4444444 4 78999887643 23
Q ss_pred chhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHhhhh
Q psy6272 362 DMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESV 402 (547)
Q Consensus 362 ~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~aE~~ 402 (547)
.|+..++..|||+|++. .--..+--.++.+|.+..+..
T Consensus 255 --~da~~~l~~GAd~V~vg-~~~l~~~p~~~~~i~~~l~~~ 292 (311)
T 1jub_A 255 --QDAFEHLLCGATMLQIG-TALHKEGPAIFDRIIKELEEI 292 (311)
T ss_dssp --HHHHHHHHHTCSEEEEC-HHHHHHCTHHHHHHHHHHHHH
T ss_pred --HHHHHHHHcCCCEEEEc-hHHHhcCcHHHHHHHHHHHHH
Confidence 78888899999999998 322212344556666555543
No 55
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=92.20 E-value=1.2 Score=52.13 Aligned_cols=121 Identities=15% Similarity=0.215 Sum_probs=73.6
Q ss_pred HHHHHHHHcCCcEEEEccc---------------CChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-----
Q psy6272 243 HVVDLIVREAVDIIIMSSV---------------TGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME----- 302 (547)
Q Consensus 243 ~di~~~~~~g~d~I~~sfV---------------~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~----- 302 (547)
+.++.+.+.|+|+|.+.+- ++++.+.++-+.+.+. -++.|++|+= + .+.++.+++..
T Consensus 652 ~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~-~~~Pv~vK~~-~-~~~~~~~~a~~~~~~G 728 (1025)
T 1gte_A 652 ELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQA-VQIPFFAKLT-P-NVTDIVSIARAAKEGG 728 (1025)
T ss_dssp HHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHH-CSSCEEEEEC-S-CSSCHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHh-hCCceEEEeC-C-ChHHHHHHHHHHHHcC
Confidence 3345566789999999542 3334444444444432 2578999982 2 34455666555
Q ss_pred cCEEEE-----------------------cCCcccccCChHHHHHHHHHHHHHHHHc-CCcEEEEcCCCCCCCccccccc
Q psy6272 303 SDGVVL-----------------------NRIQLAVATSVEVTFLAQKMIAARCNKQ-GKPFLVVGDILPDHNVEEYSDV 358 (547)
Q Consensus 303 ~DgImI-----------------------argDLg~e~~~e~v~~~qk~ii~~c~~~-gKPvi~aTq~Le~PtraE~~~~ 358 (547)
+|+|.+ +|...+---|....+.+-..+-+..++. +.|+|....+- ..
T Consensus 729 ~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg~~~~~~~~~~v~~v~~~~~~ipvi~~GGI~------s~--- 799 (1025)
T 1gte_A 729 ADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARALPGFPILATGGID------SA--- 799 (1025)
T ss_dssp CSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEESGGGHHHHHHHHHHHHHHSTTCCEEEESSCC------SH---
T ss_pred CCEEEEeccccccccccccccccccccccccccCCCCCcccchhHHHHHHHHHHHHcCCCCEEEecCcC------CH---
Confidence 599998 1222222223334444333333334445 79999987743 24
Q ss_pred CccchhhHHHHHHhCccEEeeC
Q psy6272 359 SIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 359 ~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.|+..++..|+|+||+.
T Consensus 800 -----~da~~~l~~Ga~~v~vg 816 (1025)
T 1gte_A 800 -----ESGLQFLHSGASVLQVC 816 (1025)
T ss_dssp -----HHHHHHHHTTCSEEEES
T ss_pred -----HHHHHHHHcCCCEEEEe
Confidence 88899999999999998
No 56
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=92.12 E-value=2.1 Score=44.69 Aligned_cols=121 Identities=20% Similarity=0.201 Sum_probs=72.4
Q ss_pred hhHHHHHHHHHcCCcEEEE--cccCChhhHHHHHHHHHhcCCCceEEE-EecCHHHHhhHHHHHhh-cCEEEEcCCcccc
Q psy6272 240 RDKHVVDLIVREAVDIIIM--SSVTGANSIREMRGMLEDHVDRVLILA-KIETLLGMEYMDEIIME-SDGVVLNRIQLAV 315 (547)
Q Consensus 240 ~D~~di~~~~~~g~d~I~~--sfV~sa~di~~~r~~l~~~~~~i~Iia-kIEt~~av~nldeIl~~-~DgImIargDLg~ 315 (547)
.+.+.+..+++.|+|+|.+ ++ .+++...++-+.+.+.-.++.|++ .+-+.+-.+.+ .+. +|+|.++-+ -|.
T Consensus 153 ~~~~~a~~~~~~G~d~i~i~~~~-g~~~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a---~~~Gad~I~vg~~-~G~ 227 (404)
T 1eep_A 153 DTIERVEELVKAHVDILVIDSAH-GHSTRIIELIKKIKTKYPNLDLIAGNIVTKEAALDL---ISVGADCLKVGIG-PGS 227 (404)
T ss_dssp THHHHHHHHHHTTCSEEEECCSC-CSSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHH---HTTTCSEEEECSS-CST
T ss_pred hHHHHHHHHHHCCCCEEEEeCCC-CChHHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHH---HhcCCCEEEECCC-CCc
Confidence 4566778889999999987 44 233333333333333322566775 56665444333 333 799999421 111
Q ss_pred --------cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 316 --------ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 316 --------e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
..+.+.+ .....+.+.+...++|||.+..+- .- .|++.++..|||+|++.
T Consensus 228 ~~~~~~~~~~g~p~~-~~l~~v~~~~~~~~ipVia~GGI~------~~--------~d~~~ala~GAd~V~iG 285 (404)
T 1eep_A 228 ICTTRIVAGVGVPQI-TAICDVYEACNNTNICIIADGGIR------FS--------GDVVKAIAAGADSVMIG 285 (404)
T ss_dssp TSHHHHHHCCCCCHH-HHHHHHHHHHTTSSCEEEEESCCC------SH--------HHHHHHHHHTCSEEEEC
T ss_pred CcCccccCCCCcchH-HHHHHHHHHHhhcCceEEEECCCC------CH--------HHHHHHHHcCCCHHhhC
Confidence 0122222 223334444555789999877643 23 89999999999999998
No 57
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=92.12 E-value=1.5 Score=44.87 Aligned_cols=122 Identities=16% Similarity=0.211 Sum_probs=69.8
Q ss_pred ChhhHHHHHHHHHcC--CcEEEEcccC-ChhhHHHHHHHHHhcCCCceEEEE-ecCHHHHhhHHHHHhh-cCEEEEcC--
Q psy6272 238 ADRDKHVVDLIVREA--VDIIIMSSVT-GANSIREMRGMLEDHVDRVLILAK-IETLLGMEYMDEIIME-SDGVVLNR-- 310 (547)
Q Consensus 238 t~~D~~di~~~~~~g--~d~I~~sfV~-sa~di~~~r~~l~~~~~~i~Iiak-IEt~~av~nldeIl~~-~DgImIar-- 310 (547)
.+.+.+.++...+.| +|+|.+..-. +.....+.-+.+.+.-..+.++.. |-+.+ ......+. +|+|.++-
T Consensus 104 ~~~~~~~a~~~~~~g~~~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e---~A~~a~~aGad~Ivvs~hg 180 (336)
T 1ypf_A 104 KEDEYEFVQQLAAEHLTPEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGTPE---AVRELENAGADATKVGIGP 180 (336)
T ss_dssp SHHHHHHHHHHHHTTCCCSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEECSHH---HHHHHHHHTCSEEEECSSC
T ss_pred CHHHHHHHHHHHhcCCCCCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcCCHH---HHHHHHHcCCCEEEEecCC
Confidence 356677788889999 9998764322 222222222223222234566655 65554 33333444 79999931
Q ss_pred Cc-------ccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 311 IQ-------LAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 311 gD-------Lg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
|= .+...| -+ .-..+.+.+++.++|||.+..+- .- .|+..++..|||+||+.
T Consensus 181 G~~~~~~~~~~~g~~--g~--~~~~l~~v~~~~~ipVIa~GGI~------~g--------~Dv~kalalGAdaV~iG 239 (336)
T 1ypf_A 181 GKVCITKIKTGFGTG--GW--QLAALRWCAKAASKPIIADGGIR------TN--------GDVAKSIRFGATMVMIG 239 (336)
T ss_dssp STTCHHHHHHSCSST--TC--HHHHHHHHHHTCSSCEEEESCCC------ST--------HHHHHHHHTTCSEEEES
T ss_pred CceeecccccCcCCc--hh--HHHHHHHHHHHcCCcEEEeCCCC------CH--------HHHHHHHHcCCCEEEeC
Confidence 10 111111 00 11223334445599999987743 24 89999999999999998
No 58
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=91.75 E-value=4.1 Score=42.34 Aligned_cols=149 Identities=17% Similarity=0.237 Sum_probs=83.0
Q ss_pred hhhHHHHHH---HHHcCCcEEEEcc----------cCChhhHHHHHHHHHhc------CCCceEEEEecCHHHHhhHHHH
Q psy6272 239 DRDKHVVDL---IVREAVDIIIMSS----------VTGANSIREMRGMLEDH------VDRVLILAKIETLLGMEYMDEI 299 (547)
Q Consensus 239 ~~D~~di~~---~~~~g~d~I~~sf----------V~sa~di~~~r~~l~~~------~~~i~IiakIEt~~av~nldeI 299 (547)
+.+.+|... .+..++|+|-+.+ .++.+.+.++-+.+.+. ..++.|++||=--...+++.+|
T Consensus 160 ~~~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~i 239 (367)
T 3zwt_A 160 VDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDI 239 (367)
T ss_dssp SCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHH
T ss_pred CcCHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHH
Confidence 344555433 3334589988753 23344455554444321 1468899999532223356666
Q ss_pred Hhh-----cCEEEEc-----CCc-----ccccCC----hHHHHHHHHHHHHHHHHc--CCcEEEEcCCCCCCCccccccc
Q psy6272 300 IME-----SDGVVLN-----RIQ-----LAVATS----VEVTFLAQKMIAARCNKQ--GKPFLVVGDILPDHNVEEYSDV 358 (547)
Q Consensus 300 l~~-----~DgImIa-----rgD-----Lg~e~~----~e~v~~~qk~ii~~c~~~--gKPvi~aTq~Le~PtraE~~~~ 358 (547)
++. +|||.+. |-+ ++.+.| ....+..-+.+-...+.. .+|+|....+. ..
T Consensus 240 a~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~------s~--- 310 (367)
T 3zwt_A 240 ASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS------SG--- 310 (367)
T ss_dssp HHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC------SH---
T ss_pred HHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC------CH---
Confidence 655 5999874 211 111111 122333334333344445 69999987744 24
Q ss_pred CccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHhhhh
Q psy6272 359 SIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESV 402 (547)
Q Consensus 359 ~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~aE~~ 402 (547)
.|+..++..|||+||+. ..-..+--.++.+|.+..+..
T Consensus 311 -----~da~~~l~~GAd~V~vg-ra~l~~gP~~~~~i~~~l~~~ 348 (367)
T 3zwt_A 311 -----QDALEKIRAGASLVQLY-TALTFWGPPVVGKVKRELEAL 348 (367)
T ss_dssp -----HHHHHHHHHTCSEEEES-HHHHHHCTHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHcCCCEEEEC-HHHHhcCcHHHHHHHHHHHHH
Confidence 88888999999999998 332223345566666665543
No 59
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=91.72 E-value=3.8 Score=41.46 Aligned_cols=115 Identities=20% Similarity=0.201 Sum_probs=63.4
Q ss_pred cCCcEEEEccc-------C---Ch----hhHHHHHHHHHh----cCCCceEEEEecCHHHHhhHHHHHhh-----cCEEE
Q psy6272 251 EAVDIIIMSSV-------T---GA----NSIREMRGMLED----HVDRVLILAKIETLLGMEYMDEIIME-----SDGVV 307 (547)
Q Consensus 251 ~g~d~I~~sfV-------~---sa----~di~~~r~~l~~----~~~~i~IiakIEt~~av~nldeIl~~-----~DgIm 307 (547)
.|+|+|-+.|- + +. +.++.+|+...+ .+.+..|+.||=.-...+++.++++. +|+|.
T Consensus 164 ~g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~ 243 (336)
T 1f76_A 164 AYAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQVADSLVRHNIDGVI 243 (336)
T ss_dssp GGCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEE
T ss_pred ccCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHHHHHHHHcCCcEEE
Confidence 48999888661 1 11 233444444321 14578899997422112233333333 59998
Q ss_pred EcCCcccc----------cC----ChHHHHHHHHHHHHHHHH-c--CCcEEEEcCCCCCCCcccccccCccchhhHHHHH
Q psy6272 308 LNRIQLAV----------AT----SVEVTFLAQKMIAARCNK-Q--GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIV 370 (547)
Q Consensus 308 IargDLg~----------e~----~~e~v~~~qk~ii~~c~~-~--gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav 370 (547)
+.-+-.+. +. |....+... ..+...++ . ++|||....+- .. .|+..++
T Consensus 244 vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~-~~i~~i~~~~~~~ipVi~~GGI~------~~--------~da~~~l 308 (336)
T 1f76_A 244 ATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKST-EIIRRLSLELNGRLPIIGVGGID------SV--------IAAREKI 308 (336)
T ss_dssp ECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHH-HHHHHHHHHHTTSSCEEEESSCC------SH--------HHHHHHH
T ss_pred EeCCcccccccccccccccCCCcCCchhHHHHH-HHHHHHHHHhCCCCCEEEECCCC------CH--------HHHHHHH
Confidence 85321111 11 111122222 23333333 4 79999987743 24 8888999
Q ss_pred HhCccEEeeC
Q psy6272 371 QDGADVVVLT 380 (547)
Q Consensus 371 ~~g~D~vmLs 380 (547)
..|||+|++.
T Consensus 309 ~~GAd~V~ig 318 (336)
T 1f76_A 309 AAGASLVQIY 318 (336)
T ss_dssp HHTCSEEEES
T ss_pred HCCCCEEEee
Confidence 9999999998
No 60
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=91.22 E-value=0.61 Score=45.34 Aligned_cols=114 Identities=12% Similarity=0.064 Sum_probs=70.3
Q ss_pred HHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEc---CCcccccCChH
Q psy6272 244 VVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLN---RIQLAVATSVE 320 (547)
Q Consensus 244 di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIa---rgDLg~e~~~e 320 (547)
.++.+.+.|+|+|.+.. +..+++.+..+.+.+.|....+...-.| .++.+++++...|.|++- +|==|.....+
T Consensus 79 ~i~~~~~aGad~itvH~-Ea~~~~~~~i~~i~~~G~k~gval~p~t--~~e~l~~~l~~~D~Vl~msv~pGf~Gq~f~~~ 155 (228)
T 3ovp_A 79 WVKPMAVAGANQYTFHL-EATENPGALIKDIRENGMKVGLAIKPGT--SVEYLAPWANQIDMALVMTVEPGFGGQKFMED 155 (228)
T ss_dssp GHHHHHHHTCSEEEEEG-GGCSCHHHHHHHHHHTTCEEEEEECTTS--CGGGTGGGGGGCSEEEEESSCTTTCSCCCCGG
T ss_pred HHHHHHHcCCCEEEEcc-CCchhHHHHHHHHHHcCCCEEEEEcCCC--CHHHHHHHhccCCeEEEeeecCCCCCcccCHH
Confidence 47788899999999975 5556777777777777766555444344 467888889889988863 22212222222
Q ss_pred HHHHHHHHHHHHHHHc--CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 321 VTFLAQKMIAARCNKQ--GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 321 ~v~~~qk~ii~~c~~~--gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.+..+. ..++. +.|+.+...+ +| ..+..++..|||.++..
T Consensus 156 ~l~ki~-----~lr~~~~~~~I~VdGGI--~~-------------~t~~~~~~aGAd~~VvG 197 (228)
T 3ovp_A 156 MMPKVH-----WLRTQFPSLDIEVDGGV--GP-------------DTVHKCAEAGANMIVSG 197 (228)
T ss_dssp GHHHHH-----HHHHHCTTCEEEEESSC--ST-------------TTHHHHHHHTCCEEEES
T ss_pred HHHHHH-----HHHHhcCCCCEEEeCCc--CH-------------HHHHHHHHcCCCEEEEe
Confidence 222222 12222 4566665543 23 33445677799999986
No 61
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=91.16 E-value=3.3 Score=44.62 Aligned_cols=121 Identities=17% Similarity=0.168 Sum_probs=76.0
Q ss_pred HHHHHHHHHcCCcEEEEccc--CChhhHHHHHHHHHhcCCC-ceE-EEEecCHHHHhhHHHHHhhcCEEEEcCCccc---
Q psy6272 242 KHVVDLIVREAVDIIIMSSV--TGANSIREMRGMLEDHVDR-VLI-LAKIETLLGMEYMDEIIMESDGVVLNRIQLA--- 314 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV--~sa~di~~~r~~l~~~~~~-i~I-iakIEt~~av~nldeIl~~~DgImIargDLg--- 314 (547)
.+.++...+.|++.+.+..- .+...+..+ +.+.+...+ +.+ +..+.|.+..+.+-+ .-+|+|.+|-|-=+
T Consensus 244 ~e~~~~l~e~gv~~l~Vd~~~g~~~~~~~~i-~~lk~~~~~~~~Vi~G~V~t~~~a~~l~~--aGad~I~Vg~~~g~~~~ 320 (503)
T 1me8_A 244 RERVPALVEAGADVLCIDSSDGFSEWQKITI-GWIREKYGDKVKVGAGNIVDGEGFRYLAD--AGADFIKIGIGGGSICI 320 (503)
T ss_dssp HHHHHHHHHHTCSEEEECCSCCCSHHHHHHH-HHHHHHHGGGSCEEEEEECSHHHHHHHHH--HTCSEEEECSSCSTTCC
T ss_pred HHHHHHHHhhhccceEEecccCcccchhhHH-HHHHHhCCCCceEeeccccCHHHHHHHHH--hCCCeEEecccCCcCcc
Confidence 45577888899999877322 122122222 333332223 444 457888888877633 23899998753211
Q ss_pred ----ccCChHHHHHHHHHHHHHHHHc------CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 315 ----VATSVEVTFLAQKMIAARCNKQ------GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 315 ----~e~~~e~v~~~qk~ii~~c~~~------gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
...|.+.+ .+...+.+.|++. ++|||.+..+. -- .|++.|+..|||+||+.
T Consensus 321 ~r~~~~~g~p~~-~~l~~v~~~~~~~~~~~~~~ipvia~GGi~------~~--------~di~kAlalGA~~V~iG 381 (503)
T 1me8_A 321 TREQKGIGRGQA-TAVIDVVAERNKYFEETGIYIPVCSDGGIV------YD--------YHMTLALAMGADFIMLG 381 (503)
T ss_dssp STTTTCCCCCHH-HHHHHHHHHHHHHHHHHSEECCEEEESCCC------SH--------HHHHHHHHTTCSEEEES
T ss_pred cccccCCCCchH-HHHHHHHHHHHHHhhhcCCCceEEEeCCCC------CH--------HHHHHHHHcCCCEEEEC
Confidence 11233433 3444577777777 89999877743 24 89999999999999999
No 62
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=90.57 E-value=3.6 Score=38.68 Aligned_cols=118 Identities=12% Similarity=0.148 Sum_probs=69.1
Q ss_pred HHHHHHHHHcCCcEEEEcccC--Ch-hhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccc-c
Q psy6272 242 KHVVDLIVREAVDIIIMSSVT--GA-NSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAV-A 316 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~--sa-~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~-e 316 (547)
.+.+..+++.|+|+|.+.... ++ +.+.++.+.+.+......++..+-|.+-... .... +|.|+++.....- .
T Consensus 78 ~~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~v~~~~~t~~e~~~---~~~~G~d~i~~~~~g~t~~~ 154 (223)
T 1y0e_A 78 SKEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVEIMADIATVEEAKN---AARLGFDYIGTTLHGYTSYT 154 (223)
T ss_dssp HHHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSEEEEECSSHHHHHH---HHHTTCSEEECTTTTSSTTS
T ss_pred HHHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCceEEecCCCHHHHHH---HHHcCCCEEEeCCCcCcCCC
Confidence 556788899999999876543 22 2444444444433234566667666443322 2222 6999886532211 1
Q ss_pred C----ChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 317 T----SVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 317 ~----~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
. ....+.. +-+.++..+.|++....+- .. .|+..+...|+|++++.
T Consensus 155 ~~~~~~~~~~~~----~~~~~~~~~ipvia~GGI~------~~--------~~~~~~~~~Gad~v~vG 204 (223)
T 1y0e_A 155 QGQLLYQNDFQF----LKDVLQSVDAKVIAEGNVI------TP--------DMYKRVMDLGVHCSVVG 204 (223)
T ss_dssp TTCCTTHHHHHH----HHHHHHHCCSEEEEESSCC------SH--------HHHHHHHHTTCSEEEEC
T ss_pred CCCCCCcccHHH----HHHHHhhCCCCEEEecCCC------CH--------HHHHHHHHcCCCEEEEC
Confidence 1 1222222 2223344689999877632 13 77788888999999997
No 63
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=90.45 E-value=2.8 Score=40.06 Aligned_cols=116 Identities=10% Similarity=0.066 Sum_probs=69.4
Q ss_pred HHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHh---hcCEEEEcCCcc---cccC
Q psy6272 244 VVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIM---ESDGVVLNRIQL---AVAT 317 (547)
Q Consensus 244 di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~---~~DgImIargDL---g~e~ 317 (547)
.++.+.+.|+|+|.+..-.+.+.+.+..+.+.+.| ..++.-+....-++.+.+++. .+|.|.+..-.- +...
T Consensus 79 ~i~~~~~agad~v~vH~~~~~~~~~~~~~~i~~~g--~~igv~~~p~t~~e~~~~~~~~~~~~d~vl~~sv~pg~~g~~~ 156 (228)
T 1h1y_A 79 YVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKG--MRPGVSLRPGTPVEEVFPLVEAENPVELVLVMTVEPGFGGQKF 156 (228)
T ss_dssp GHHHHHHHTCSEEEEEGGGCTTTHHHHHHHHHHTT--CEEEEEECTTSCGGGGHHHHHSSSCCSEEEEESSCTTCSSCCC
T ss_pred HHHHHHHcCCCEEEECCCCcccHHHHHHHHHHHcC--CCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEeecCCCCcccC
Confidence 47888889999999998777665234444444444 445555633334567888888 789998854322 2233
Q ss_pred ChHHHHHHHHHHHHHHHHc-CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 318 SVEVTFLAQKMIAARCNKQ-GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 318 ~~e~v~~~qk~ii~~c~~~-gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
+...+..++ +..+.. ++|+.++..+ .| .++..++..|+|++...
T Consensus 157 ~~~~l~~i~----~~~~~~~~~pi~v~GGI--~~-------------~ni~~~~~aGaD~vvvG 201 (228)
T 1h1y_A 157 MPEMMEKVR----ALRKKYPSLDIEVDGGL--GP-------------STIDVAASAGANCIVAG 201 (228)
T ss_dssp CGGGHHHHH----HHHHHCTTSEEEEESSC--ST-------------TTHHHHHHHTCCEEEES
T ss_pred CHHHHHHHH----HHHHhcCCCCEEEECCc--CH-------------HHHHHHHHcCCCEEEEC
Confidence 333232222 112222 7899887764 22 23344555699999996
No 64
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=90.44 E-value=2.1 Score=43.26 Aligned_cols=111 Identities=14% Similarity=0.162 Sum_probs=68.7
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEE-cCCcccccCC--
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVL-NRIQLAVATS-- 318 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImI-argDLg~e~~-- 318 (547)
.+.++.+++.|+|+|.+++=...+.++. +.+. .++++.++-|.+....+ .-.-+|+|.+ ++. -|-..|
T Consensus 86 ~~~~~~~~~~g~d~V~~~~g~p~~~~~~----l~~~--gi~vi~~v~t~~~a~~~--~~~GaD~i~v~g~~-~GG~~G~~ 156 (328)
T 2gjl_A 86 AEYRAAIIEAGIRVVETAGNDPGEHIAE----FRRH--GVKVIHKCTAVRHALKA--ERLGVDAVSIDGFE-CAGHPGED 156 (328)
T ss_dssp HHHHHHHHHTTCCEEEEEESCCHHHHHH----HHHT--TCEEEEEESSHHHHHHH--HHTTCSEEEEECTT-CSBCCCSS
T ss_pred HHHHHHHHhcCCCEEEEcCCCcHHHHHH----HHHc--CCCEEeeCCCHHHHHHH--HHcCCCEEEEECCC-CCcCCCCc
Confidence 4567888999999999987544333333 3333 57888888776544332 1223799998 431 111111
Q ss_pred -hHHHHHHHHHHHHHH-HHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 319 -VEVTFLAQKMIAARC-NKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 319 -~e~v~~~qk~ii~~c-~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
...+. .+... ...++||+.+..+- .- .|+..++..|+|++++.
T Consensus 157 ~~~~~~-----~l~~v~~~~~iPviaaGGI~------~~--------~~v~~al~~GAdgV~vG 201 (328)
T 2gjl_A 157 DIPGLV-----LLPAAANRLRVPIIASGGFA------DG--------RGLVAALALGADAINMG 201 (328)
T ss_dssp CCCHHH-----HHHHHHTTCCSCEEEESSCC------SH--------HHHHHHHHHTCSEEEES
T ss_pred cccHHH-----HHHHHHHhcCCCEEEECCCC------CH--------HHHHHHHHcCCCEEEEC
Confidence 12221 12222 23489999987742 12 67888888999999998
No 65
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=90.40 E-value=4.4 Score=43.31 Aligned_cols=124 Identities=19% Similarity=0.232 Sum_probs=73.6
Q ss_pred hhhHHHHHHHHHcCCcEEEEcccC--ChhhHHHHHHHHHhcCCCceEEE-EecCHHHHhhHHHHHhhcCEEEEcCCcccc
Q psy6272 239 DRDKHVVDLIVREAVDIIIMSSVT--GANSIREMRGMLEDHVDRVLILA-KIETLLGMEYMDEIIMESDGVVLNRIQLAV 315 (547)
Q Consensus 239 ~~D~~di~~~~~~g~d~I~~sfV~--sa~di~~~r~~l~~~~~~i~Iia-kIEt~~av~nldeIl~~~DgImIargDLg~ 315 (547)
+...+.+.++++.|+|.|.+.+.. .....+.++.+-+..+ ++.+++ -+-|.+....+.+ .-+|+|.++-+-=+.
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p-~~pvi~g~~~t~e~a~~l~~--~G~d~I~v~~~~G~~ 312 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYP-DLPVVAGNVATPEGTEALIK--AGADAVKVGVGPGSI 312 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCT-TSCEEEEEECSHHHHHHHHH--TTCSEEEECSSCSTT
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCC-CceEEeCCcCCHHHHHHHHH--cCCCEEEEcCCCCcc
Confidence 344677889999999999986643 1122223322222222 355554 4656555544332 127999995431010
Q ss_pred -------cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 316 -------ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 316 -------e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
..+.+.. .+...+.+.++..++|||.+..+- .- .|++.++..|||++++.
T Consensus 313 ~~~~~~~~~g~p~~-~~l~~v~~~~~~~~ipvia~GGI~------~~--------~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 313 CTTRVVAGVGVPQL-TAVMECSEVARKYDVPIIADGGIR------YS--------GDIVKALAAGAESVMVG 369 (494)
T ss_dssp CHHHHHHCCCCCHH-HHHHHHHHHHHTTTCCEEEESCCC------SH--------HHHHHHHHTTCSEEEES
T ss_pred ccccccCCCCccHH-HHHHHHHHHHhhcCCCEEEECCcC------CH--------HHHHHHHHcCCCEEEEC
Confidence 0122222 233345556666799999987743 24 89999999999999998
No 66
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=89.95 E-value=5.1 Score=42.64 Aligned_cols=125 Identities=19% Similarity=0.251 Sum_probs=77.2
Q ss_pred hhhHHHHHHHHHcCCcEEEEcccCC-hhh-HHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCc--cc
Q psy6272 239 DRDKHVVDLIVREAVDIIIMSSVTG-ANS-IREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQ--LA 314 (547)
Q Consensus 239 ~~D~~di~~~~~~g~d~I~~sfV~s-a~d-i~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargD--Lg 314 (547)
....+.+.++++.|+|.|++..... .+. ...++.+......-..+...+-+.+....+.+ .-+|+|.+|-|- ..
T Consensus 232 ~~~~~~a~~l~~~G~d~ivi~~a~g~~~~~~~~i~~l~~~~p~~pvi~G~v~t~~~a~~~~~--~Gad~I~vg~g~g~~~ 309 (491)
T 1zfj_A 232 SDTFERAEALFEAGADAIVIDTAHGHSAGVLRKIAEIRAHFPNRTLIAGNIATAEGARALYD--AGVDVVKVGIGPGSIC 309 (491)
T ss_dssp TTHHHHHHHHHHHTCSEEEECCSCTTCHHHHHHHHHHHHHCSSSCEEEEEECSHHHHHHHHH--TTCSEEEECSSCCTTB
T ss_pred hhHHHHHHHHHHcCCCeEEEeeecCcchhHHHHHHHHHHHCCCCcEeCCCccCHHHHHHHHH--cCCCEEEECccCCcce
Confidence 4457788999999999999886421 121 22222222222222334456777766654422 237999998531 00
Q ss_pred c-----cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 315 V-----ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 315 ~-----e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
. ..+.+. ..+.+++...|+..+.|+|....+- -. .|++.++..|||++++.
T Consensus 310 ~tr~~~~~~~p~-~~~l~~~~~~~~~~~ipvia~GGi~------~~--------~di~kal~~GA~~v~vG 365 (491)
T 1zfj_A 310 TTRVVAGVGVPQ-VTAIYDAAAVAREYGKTIIADGGIK------YS--------GDIVKALAAGGNAVMLG 365 (491)
T ss_dssp CHHHHTCCCCCH-HHHHHHHHHHHHHTTCEEEEESCCC------SH--------HHHHHHHHTTCSEEEES
T ss_pred EEeeecCCCCCc-HHHHHHHHHHHhhcCCCEEeeCCCC------CH--------HHHHHHHHcCCcceeeC
Confidence 0 112222 3334557777888899999877642 24 89999999999999997
No 67
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=89.94 E-value=4.7 Score=39.10 Aligned_cols=116 Identities=12% Similarity=0.048 Sum_probs=70.5
Q ss_pred hHHHHHHHHHcCCcEEEEccc--CChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCccccc-
Q psy6272 241 DKHVVDLIVREAVDIIIMSSV--TGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAVA- 316 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sfV--~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~e- 316 (547)
+.+++..+++.|+|+|.+--. .+++.+.++.+.+.+. .+.+++.+-|.+-.+.. .+. +|.|.+.-..+.-.
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t~eea~~a---~~~Gad~Ig~~~~g~t~~~ 164 (232)
T 3igs_A 90 FLDDVDALAQAGAAIIAVDGTARQRPVAVEALLARIHHH--HLLTMADCSSVDDGLAC---QRLGADIIGTTMSGYTTPD 164 (232)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECCSHHHHHHH---HHTTCSEEECTTTTSSSSS
T ss_pred cHHHHHHHHHcCCCEEEECccccCCHHHHHHHHHHHHHC--CCEEEEeCCCHHHHHHH---HhCCCCEEEEcCccCCCCC
Confidence 355678889999999986433 4667788777777654 56777776655433322 223 68886432112110
Q ss_pred -CChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 317 -TSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 317 -~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.....+..+ ...++.++||+....+- | . .|+..+...|+|++++.
T Consensus 165 ~~~~~~~~~i-----~~l~~~~ipvIA~GGI~---t---~--------~d~~~~~~~GadgV~VG 210 (232)
T 3igs_A 165 TPEEPDLPLV-----KALHDAGCRVIAEGRYN---S---P--------ALAAEAIRYGAWAVTVG 210 (232)
T ss_dssp CCSSCCHHHH-----HHHHHTTCCEEEESCCC---S---H--------HHHHHHHHTTCSEEEEC
T ss_pred CCCCCCHHHH-----HHHHhcCCcEEEECCCC---C---H--------HHHHHHHHcCCCEEEEe
Confidence 111122211 22222389999876632 1 3 78888888999999996
No 68
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=89.69 E-value=3.6 Score=40.00 Aligned_cols=134 Identities=16% Similarity=0.163 Sum_probs=82.1
Q ss_pred HHHHHHHcCCcEEEEcccC-ChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEE---cCCcccccCCh
Q psy6272 244 VVDLIVREAVDIIIMSSVT-GANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVL---NRIQLAVATSV 319 (547)
Q Consensus 244 di~~~~~~g~d~I~~sfV~-sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImI---argDLg~e~~~ 319 (547)
.++.+.+.|+|+|.+..-. + .++.++.+.+.+.|....+...-.|+ ++.+++++...|.|.+ .+|==|.....
T Consensus 72 ~i~~~~~aGAd~itvh~Ea~~-~~~~~~i~~i~~~G~k~gv~lnp~tp--~~~~~~~l~~~D~VlvmsV~pGfggQ~f~~ 148 (231)
T 3ctl_A 72 YIAQLARAGADFITLHPETIN-GQAFRLIDEIRRHDMKVGLILNPETP--VEAMKYYIHKADKITVMTVDPGFAGQPFIP 148 (231)
T ss_dssp THHHHHHHTCSEEEECGGGCT-TTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCTTCSSCCCCT
T ss_pred HHHHHHHcCCCEEEECcccCC-ccHHHHHHHHHHcCCeEEEEEECCCc--HHHHHHHHhcCCEEEEeeeccCcCCccccH
Confidence 4788899999999998644 4 46888888888887776666555554 6778888888998874 33322333332
Q ss_pred HHHHHHHHHHHHHHHH--cCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC-----Ccch-HHHHHHH
Q psy6272 320 EVTFLAQKMIAARCNK--QGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT-----QSEQ-AHHRVDI 391 (547)
Q Consensus 320 e~v~~~qk~ii~~c~~--~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs-----k~Et-a~eaV~~ 391 (547)
+.+..+ +++-+.+.+ .+.++.+...+ .+ ..+..++..|+|.+... +++- -.++++.
T Consensus 149 ~~l~kI-~~lr~~~~~~~~~~~I~VdGGI--~~-------------~~~~~~~~aGAd~~V~G~saif~~~d~~~~~~~~ 212 (231)
T 3ctl_A 149 EMLDKL-AELKAWREREGLEYEIEVDGSC--NQ-------------ATYEKLMAAGADVFIVGTSGLFNHAENIDEAWRI 212 (231)
T ss_dssp THHHHH-HHHHHHHHHHTCCCEEEEESCC--ST-------------TTHHHHHHHTCCEEEECTTTTGGGCSSHHHHHHH
T ss_pred HHHHHH-HHHHHHHhccCCCceEEEECCc--CH-------------HHHHHHHHcCCCEEEEccHHHhCCCCcHHHHHHH
Confidence 222222 223333433 35677665543 22 33344566799999986 3322 3356666
Q ss_pred HHHHH
Q psy6272 392 LKEIL 396 (547)
Q Consensus 392 m~~I~ 396 (547)
|++.+
T Consensus 213 l~~~~ 217 (231)
T 3ctl_A 213 MTAQI 217 (231)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65543
No 69
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=89.10 E-value=4.8 Score=38.88 Aligned_cols=105 Identities=14% Similarity=0.146 Sum_probs=71.0
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccccCChH
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAVATSVE 320 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~e~~~e 320 (547)
.+.++.+++.|++.|-+.+ ++....+.++.+..+. .++.+-+-. .---+.++.-+++ +|+|+.+-.|
T Consensus 32 ~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~l~vgaGt--vl~~d~~~~A~~aGAd~v~~p~~d-------- 99 (224)
T 1vhc_A 32 LPLADTLAKNGLSVAEITF-RSEAAADAIRLLRANR-PDFLIAAGT--VLTAEQVVLAKSSGADFVVTPGLN-------- 99 (224)
T ss_dssp HHHHHHHHHTTCCEEEEET-TSTTHHHHHHHHHHHC-TTCEEEEES--CCSHHHHHHHHHHTCSEEECSSCC--------
T ss_pred HHHHHHHHHcCCCEEEEec-cCchHHHHHHHHHHhC-cCcEEeeCc--EeeHHHHHHHHHCCCCEEEECCCC--------
Confidence 4567789999999999996 5666666666555443 345554432 2222455555555 7999776444
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 321 VTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 321 ~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
..+++.|+++|+|++..+. . . +++..|...|+|.+.+=
T Consensus 100 ------~~v~~~ar~~g~~~i~Gv~---t-----~--------~e~~~A~~~Gad~vk~F 137 (224)
T 1vhc_A 100 ------PKIVKLCQDLNFPITPGVN---N-----P--------MAIEIALEMGISAVKFF 137 (224)
T ss_dssp ------HHHHHHHHHTTCCEECEEC---S-----H--------HHHHHHHHTTCCEEEET
T ss_pred ------HHHHHHHHHhCCCEEeccC---C-----H--------HHHHHHHHCCCCEEEEe
Confidence 3367889999999976533 2 2 56677889999999886
No 70
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=88.93 E-value=8.6 Score=41.03 Aligned_cols=106 Identities=16% Similarity=0.192 Sum_probs=60.8
Q ss_pred Cce-EEEEecCHHHHhhHHHHHhh-----cCEEEEcCCccc--------ccC----ChHHHHHHHHHHHHHHHH-c--CC
Q psy6272 280 RVL-ILAKIETLLGMEYMDEIIME-----SDGVVLNRIQLA--------VAT----SVEVTFLAQKMIAARCNK-Q--GK 338 (547)
Q Consensus 280 ~i~-IiakIEt~~av~nldeIl~~-----~DgImIargDLg--------~e~----~~e~v~~~qk~ii~~c~~-~--gK 338 (547)
+.. |+.||=--...+++.+|++. +|||.+.-+-.. .+. |.+..+... ++++..++ . .+
T Consensus 296 ~~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl-~~i~~v~~~v~~~i 374 (443)
T 1tv5_A 296 KKPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDIST-KFICEMYNYTNKQI 374 (443)
T ss_dssp SCCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHH-HHHHHHHHHTTTCS
T ss_pred CCCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHH-HHHHHHHHHcCCCC
Confidence 456 89998432223355566555 599977643211 111 112222233 34454544 4 79
Q ss_pred cEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHhhh
Q psy6272 339 PFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTES 401 (547)
Q Consensus 339 Pvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~aE~ 401 (547)
|+|....+. .. .|+..++..|||+|++. .--..+--.+..+|.+..+.
T Consensus 375 PVIg~GGI~------s~--------~DA~e~l~aGAd~Vqig-rall~~gP~l~~~i~~~l~~ 422 (443)
T 1tv5_A 375 PIIASGGIF------SG--------LDALEKIEAGASVCQLY-SCLVFNGMKSAVQIKRELNH 422 (443)
T ss_dssp CEEEESSCC------SH--------HHHHHHHHTTEEEEEES-HHHHHHGGGHHHHHHHHHHH
T ss_pred cEEEECCCC------CH--------HHHHHHHHcCCCEEEEc-HHHHhcChHHHHHHHHHHHH
Confidence 999987744 24 88899999999999998 33222233345555555443
No 71
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=88.87 E-value=4.2 Score=38.59 Aligned_cols=114 Identities=10% Similarity=0.080 Sum_probs=67.5
Q ss_pred HHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceE-EEEecCHHHHhhHHHHHh-hcCEEEEcCCcc----cccC
Q psy6272 244 VVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLI-LAKIETLLGMEYMDEIIM-ESDGVVLNRIQL----AVAT 317 (547)
Q Consensus 244 di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~I-iakIEt~~av~nldeIl~-~~DgImIargDL----g~e~ 317 (547)
.++.+.+.|+|+|.++-....+.++++.+.+.+.|....+ +.-.-|.+ .+.++.+ -.|.+.+.+|-. |..+
T Consensus 75 ~~~~~~~aGad~i~vh~~~~~~~~~~~~~~~~~~g~~~~~d~l~~~T~~---~~~~~~~~g~d~v~~~~~~~~~~~g~~~ 151 (218)
T 3jr2_A 75 LSRMAFEAGADWITVSAAAHIATIAACKKVADELNGEIQIEIYGNWTMQ---DAKAWVDLGITQAIYHRSRDAELAGIGW 151 (218)
T ss_dssp HHHHHHHHTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEECCSSCCHH---HHHHHHHTTCCEEEEECCHHHHHHTCCS
T ss_pred HHHHHHhcCCCEEEEecCCCHHHHHHHHHHHHHhCCccceeeeecCCHH---HHHHHHHcCccceeeeeccccccCCCcC
Confidence 4577889999999998776666678888888776655443 33345653 3344443 367665544322 2223
Q ss_pred ChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 318 SVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 318 ~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
+.+.+..+.+ .+..+.|+.+...+ +| ..+..++..|+|++...
T Consensus 152 ~~~~l~~i~~-----~~~~~~pi~v~GGI--~~-------------~~~~~~~~aGAd~vvvG 194 (218)
T 3jr2_A 152 TTDDLDKMRQ-----LSALGIELSITGGI--VP-------------EDIYLFEGIKTKTFIAG 194 (218)
T ss_dssp CHHHHHHHHH-----HHHTTCEEEEESSC--CG-------------GGGGGGTTSCEEEEEES
T ss_pred CHHHHHHHHH-----HhCCCCCEEEECCC--CH-------------HHHHHHHHcCCCEEEEc
Confidence 3333333322 22357888775553 22 22334677799999997
No 72
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=88.48 E-value=3.2 Score=43.13 Aligned_cols=114 Identities=21% Similarity=0.332 Sum_probs=64.7
Q ss_pred HHHHHHHcCCcEEEEc-------ccC---ChhhHHHHHHHHHhcCCCceEEEE-ecCHHHHhhHHHHHhh-cCEEEEcCC
Q psy6272 244 VVDLIVREAVDIIIMS-------SVT---GANSIREMRGMLEDHVDRVLILAK-IETLLGMEYMDEIIME-SDGVVLNRI 311 (547)
Q Consensus 244 di~~~~~~g~d~I~~s-------fV~---sa~di~~~r~~l~~~~~~i~Iiak-IEt~~av~nldeIl~~-~DgImIarg 311 (547)
..+.+.+.|+|++.+. ++. +.+++..+++.. ++.++++ |-|.+....+ .+. +|+|++++|
T Consensus 170 ~a~~~~~agad~i~i~~~~~~~~~~~~~~~~~~i~~l~~~~-----~~pvi~ggi~t~e~a~~~---~~~Gad~i~vg~G 241 (393)
T 2qr6_A 170 IAPIVIKAGADLLVIQGTLISAEHVNTGGEALNLKEFIGSL-----DVPVIAGGVNDYTTALHM---MRTGAVGIIVGGG 241 (393)
T ss_dssp HHHHHHHTTCSEEEEECSSCCSSCCCC-----CHHHHHHHC-----SSCEEEECCCSHHHHHHH---HTTTCSEEEESCC
T ss_pred HHHHHHHCCCCEEEEeCCccccccCCCcccHHHHHHHHHhc-----CCCEEECCcCCHHHHHHH---HHcCCCEEEECCC
Confidence 3445567899999775 222 334555555432 4677765 5554443333 333 799999874
Q ss_pred cccc----cCChHHHHHHHHHHHHHH----HHcC---CcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 312 QLAV----ATSVEVTFLAQKMIAARC----NKQG---KPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 312 DLg~----e~~~e~v~~~qk~ii~~c----~~~g---KPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
--+. ..|.+.+..+ .++.+.+ .+.+ +|||.+..+- .- .|++.++..|||+|++.
T Consensus 242 g~~~~~~~~~g~~~~~~l-~~v~~~~~~~~~~~~~~~ipvia~GGI~------~~--------~dv~kalalGA~~V~iG 306 (393)
T 2qr6_A 242 ENTNSLALGMEVSMATAI-ADVAAARRDYLDETGGRYVHIIADGSIE------NS--------GDVVKAIACGADAVVLG 306 (393)
T ss_dssp SCCHHHHTSCCCCHHHHH-HHHHHHHHHHHHHHTSCCCEEEECSSCC------SH--------HHHHHHHHHTCSEEEEC
T ss_pred cccccccCCCCCChHHHH-HHHHHHHHHhHhhcCCcceEEEEECCCC------CH--------HHHHHHHHcCCCEEEEC
Confidence 3111 1122222111 1223332 2245 8999877642 24 89999999999999998
No 73
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=88.12 E-value=2.7 Score=40.54 Aligned_cols=118 Identities=11% Similarity=0.193 Sum_probs=68.4
Q ss_pred HHHHHHHcCCcEEEEccc--CChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccc---cCC
Q psy6272 244 VVDLIVREAVDIIIMSSV--TGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAV---ATS 318 (547)
Q Consensus 244 di~~~~~~g~d~I~~sfV--~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg~---e~~ 318 (547)
.++.+.+.|+|+|.+..- .+ +...++.+.+.+.|..+.+...-.|+ .+.+.+++..+|.|.+..-.-+. ...
T Consensus 77 ~i~~~~~aGadgv~vh~e~~~~-~~~~~~~~~i~~~g~~~gv~~~p~t~--~e~~~~~~~~~D~v~~msv~pg~ggq~~~ 153 (230)
T 1tqj_A 77 YVEDFAKAGADIISVHVEHNAS-PHLHRTLCQIRELGKKAGAVLNPSTP--LDFLEYVLPVCDLILIMSVNPGFGGQSFI 153 (230)
T ss_dssp THHHHHHHTCSEEEEECSTTTC-TTHHHHHHHHHHTTCEEEEEECTTCC--GGGGTTTGGGCSEEEEESSCC----CCCC
T ss_pred HHHHHHHcCCCEEEECcccccc-hhHHHHHHHHHHcCCcEEEEEeCCCc--HHHHHHHHhcCCEEEEEEeccccCCccCc
Confidence 468889999999999865 33 45556656666555555544433554 45567778889988776544431 111
Q ss_pred hHHHHHHHHHHHHHHHH--cCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 319 VEVTFLAQKMIAARCNK--QGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 319 ~e~v~~~qk~ii~~c~~--~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
+.....-+++-+.+.+ .+.|+.+...+ .+ ..+......|+|++...
T Consensus 154 -~~~~~~i~~lr~~~~~~~~~~~I~v~GGI--~~-------------~~~~~~~~aGad~vvvG 201 (230)
T 1tqj_A 154 -PEVLPKIRALRQMCDERGLDPWIEVDGGL--KP-------------NNTWQVLEAGANAIVAG 201 (230)
T ss_dssp -GGGHHHHHHHHHHHHHHTCCCEEEEESSC--CT-------------TTTHHHHHHTCCEEEES
T ss_pred -HHHHHHHHHHHHHHHhcCCCCcEEEECCc--CH-------------HHHHHHHHcCCCEEEEC
Confidence 1111212223333322 37888776553 22 22333455599999997
No 74
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=87.87 E-value=3.1 Score=43.86 Aligned_cols=100 Identities=13% Similarity=0.054 Sum_probs=75.5
Q ss_pred hHHHHHHHHHcCCcEEEEcccCChhhHHHHHH---HHHhcCCCceEEEEec--CHHHHhhHHHHHhhcCEEEEcCCcccc
Q psy6272 241 DKHVVDLIVREAVDIIIMSSVTGANSIREMRG---MLEDHVDRVLILAKIE--TLLGMEYMDEIIMESDGVVLNRIQLAV 315 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~---~l~~~~~~i~IiakIE--t~~av~nldeIl~~~DgImIargDLg~ 315 (547)
-.+.|....+.|+|.|-++ |.+.++++.+.+ .|...+.++.++|-|= -+.++..+++..+..|.+=|.||.+|-
T Consensus 40 Tv~QI~~L~~aG~eiVRva-Vp~~~~A~al~~I~~~l~~~~~~vPLVADiHF~~~~al~a~~~~a~~~dkiRINPGNig~ 118 (406)
T 4g9p_A 40 TTAQVLELHRAGSEIVRLT-VNDEEAAKAVPEIKRRLLAEGVEVPLVGDFHFNGHLLLRKYPKMAEALDKFRINPGTLGR 118 (406)
T ss_dssp HHHHHHHHHHHTCSEEEEE-CCSHHHHHHHHHHHHHHHHTTCCCCEEEECCSSHHHHHHHCHHHHHHCSEEEECTTSSCS
T ss_pred HHHHHHHHHHcCCCEEEEe-cCCHHHHHhHHHHHHHHHhcCCCCceEeeecccHHHHHHHHHHHHhHHhhcccCccccCc
Confidence 3555677788999999888 778777766654 4555678899999663 356788888888889999999999873
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCcEEEEc
Q psy6272 316 ATSVEVTFLAQKMIAARCNKQGKPFLVVG 344 (547)
Q Consensus 316 e~~~e~v~~~qk~ii~~c~~~gKPvi~aT 344 (547)
..+...--+.++++|+++|+|+=+..
T Consensus 119 ---~~k~~e~~~~vv~~ak~~~~pIRIGV 144 (406)
T 4g9p_A 119 ---GRHKDEHFAEMIRIAMDLGKPVRIGA 144 (406)
T ss_dssp ---THHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred ---cccHHHHHHHHHHHHHHccCCceecc
Confidence 22233444679999999999975543
No 75
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=87.85 E-value=9.2 Score=36.54 Aligned_cols=119 Identities=13% Similarity=0.077 Sum_probs=71.1
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEE--EcC-CcccccCC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVV--LNR-IQLAVATS 318 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgIm--Iar-gDLg~e~~ 318 (547)
.+.++.+++.|+|+|.++.. ..++.+++.+++.+.|.+.. .-+......+.+..+...+|+++ +.+ |-.|..-+
T Consensus 98 ~~~~~~~~~~Gad~v~~~~~-~~~~~~~~~~~~~~~g~~~~--~~i~~~t~~e~~~~~~~~~d~~i~~~~~~G~~g~~~~ 174 (248)
T 1geq_A 98 RNFLAEAKASGVDGILVVDL-PVFHAKEFTEIAREEGIKTV--FLAAPNTPDERLKVIDDMTTGFVYLVSLYGTTGAREE 174 (248)
T ss_dssp HHHHHHHHHHTCCEEEETTC-CGGGHHHHHHHHHHHTCEEE--EEECTTCCHHHHHHHHHHCSSEEEEECCC-------C
T ss_pred HHHHHHHHHCCCCEEEECCC-ChhhHHHHHHHHHHhCCCeE--EEECCCCHHHHHHHHHhcCCCeEEEEECCccCCCCCC
Confidence 46788999999999999854 45678888888877765433 34433334455667777788433 232 22232211
Q ss_pred h-HHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 319 V-EVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 319 ~-e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
. +.....-+++ ++..+.|+++...+= .. .|+..+...|+|++.+.
T Consensus 175 ~~~~~~~~i~~l---~~~~~~pi~~~GGI~------~~--------e~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 175 IPKTAYDLLRRA---KRICRNKVAVGFGVS------KR--------EHVVSLLKEGANGVVVG 220 (248)
T ss_dssp CCHHHHHHHHHH---HHHCSSCEEEESCCC------SH--------HHHHHHHHTTCSEEEEC
T ss_pred CChhHHHHHHHH---HhhcCCCEEEEeecC------CH--------HHHHHHHHcCCCEEEEc
Confidence 1 1111122222 333489999877631 22 66777778899999998
No 76
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=87.46 E-value=9.7 Score=38.88 Aligned_cols=142 Identities=11% Similarity=0.111 Sum_probs=85.7
Q ss_pred CCCChhhHHHH-H-HHHHcCCcEEEE-cccCChhhHHHHHHHHHh-----cCCCceEEEEecCHHHHhhHHHHHhh-cC-
Q psy6272 235 PVIADRDKHVV-D-LIVREAVDIIIM-SSVTGANSIREMRGMLED-----HVDRVLILAKIETLLGMEYMDEIIME-SD- 304 (547)
Q Consensus 235 p~lt~~D~~di-~-~~~~~g~d~I~~-sfV~sa~di~~~r~~l~~-----~~~~i~IiakIEt~~av~nldeIl~~-~D- 304 (547)
..++..|+..| + ...+.|+|.|=+ +|+.++.+.+.++.+.+. .-.+..+.+-.=+.. .++..++. .|
T Consensus 36 ~~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~---~i~~a~~~g~~~ 112 (337)
T 3ble_A 36 VSFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVDGNK---TVDWIKDSGAKV 112 (337)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCSEEEEEETTSCTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTTH---HHHHHHHHTCCE
T ss_pred CCcCHHHHHHHHHHHHHHcCCCEEEEeCCCCChhHHHHHHHHHhhhhhhccCCCCeEEEEccchh---hHHHHHHCCCCE
Confidence 34677776665 4 455589999988 677788777777665542 224556666655544 44444444 46
Q ss_pred -EEEEcCCccc----ccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEe
Q psy6272 305 -GVVLNRIQLA----VATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVV 378 (547)
Q Consensus 305 -gImIargDLg----~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vm 378 (547)
.|+++-.|+- .....++.....+.+++.|+++|+.|.+....+-..+|.+. .++.+++ .+...|+|.+.
T Consensus 113 v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~Ga~~i~ 187 (337)
T 3ble_A 113 LNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSP-----DYVKSLVEHLSKEHIERIF 187 (337)
T ss_dssp EEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCH-----HHHHHHHHHHHTSCCSEEE
T ss_pred EEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCH-----HHHHHHHHHHHHcCCCEEE
Confidence 3455544431 22345666667777999999999998875331000333222 1124444 35567999999
Q ss_pred eCCcchHH
Q psy6272 379 LTQSEQAH 386 (547)
Q Consensus 379 Lsk~Eta~ 386 (547)
|. +|+=
T Consensus 188 l~--DT~G 193 (337)
T 3ble_A 188 LP--DTLG 193 (337)
T ss_dssp EE--CTTC
T ss_pred Ee--cCCC
Confidence 96 5543
No 77
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=87.25 E-value=5.2 Score=39.94 Aligned_cols=143 Identities=10% Similarity=0.036 Sum_probs=76.0
Q ss_pred HHHHHHHHHcCCc---EEEEccc-----------CChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-----
Q psy6272 242 KHVVDLIVREAVD---IIIMSSV-----------TGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME----- 302 (547)
Q Consensus 242 ~~di~~~~~~g~d---~I~~sfV-----------~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~----- 302 (547)
.+..+.+.+.|+| +|-+.|- .+.+.+.++-+.+.+.- ++.++.|+=.--..+++.++++.
T Consensus 109 ~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~-~~Pv~vK~~~~~~~~~~~~~a~~~~~aG 187 (314)
T 2e6f_A 109 VAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAY-GLPFGVKMPPYFDIAHFDTAAAVLNEFP 187 (314)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHH-CSCEEEEECCCCCHHHHHHHHHHHHTCT
T ss_pred HHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHHHHHHhcC
Confidence 4445667778899 8888653 13333333333332221 46788997432222344444432
Q ss_pred -cCEEEEcCCc---cccc-----------------CChHHHHHHHHHHHHHHH-Hc-CCcEEEEcCCCCCCCcccccccC
Q psy6272 303 -SDGVVLNRIQ---LAVA-----------------TSVEVTFLAQKMIAARCN-KQ-GKPFLVVGDILPDHNVEEYSDVS 359 (547)
Q Consensus 303 -~DgImIargD---Lg~e-----------------~~~e~v~~~qk~ii~~c~-~~-gKPvi~aTq~Le~PtraE~~~~~ 359 (547)
+|+|.+.-.- +.++ -|....+.... .++.++ .. +.|||....+- ..
T Consensus 188 ~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~-~i~~v~~~~~~ipvi~~GGI~------~~---- 256 (314)
T 2e6f_A 188 LVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALA-NVNAFYRRCPDKLVFGCGGVY------SG---- 256 (314)
T ss_dssp TEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHH-HHHHHHHHCTTSEEEEESSCC------SH----
T ss_pred CceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHH-HHHHHHHhcCCCCEEEECCCC------CH----
Confidence 6777654211 0010 01111222223 344443 44 89999877643 23
Q ss_pred ccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHhhh
Q psy6272 360 IGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTES 401 (547)
Q Consensus 360 ~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~aE~ 401 (547)
.|+..++..|||+|++. ..-..+--.+..+|.+..+.
T Consensus 257 ----~da~~~l~~GAd~V~ig-~~~l~~~p~~~~~i~~~l~~ 293 (314)
T 2e6f_A 257 ----EDAFLHILAGASMVQVG-TALQEEGPGIFTRLEDELLE 293 (314)
T ss_dssp ----HHHHHHHHHTCSSEEEC-HHHHHHCTTHHHHHHHHHHH
T ss_pred ----HHHHHHHHcCCCEEEEc-hhhHhcCcHHHHHHHHHHHH
Confidence 78888899999999998 33222233455555555544
No 78
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=86.89 E-value=8.6 Score=36.76 Aligned_cols=105 Identities=9% Similarity=0.100 Sum_probs=70.6
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccccCChH
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAVATSVE 320 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~e~~~e 320 (547)
.+.++.+++.|++.|-+.+ ++....+.++.+..+. .++.+-+- |.---+.++.-++. +|++..+--|.
T Consensus 31 ~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~~~vgag--tvi~~d~~~~A~~aGAd~v~~p~~d~------- 99 (214)
T 1wbh_A 31 VPMAKALVAGGVRVLNVTL-RTECAVDAIRAIAKEV-PEAIVGAG--TVLNPQQLAEVTEAGAQFAISPGLTE------- 99 (214)
T ss_dssp HHHHHHHHHTTCCEEEEES-CSTTHHHHHHHHHHHC-TTSEEEEE--SCCSHHHHHHHHHHTCSCEEESSCCH-------
T ss_pred HHHHHHHHHcCCCEEEEeC-CChhHHHHHHHHHHHC-cCCEEeeC--EEEEHHHHHHHHHcCCCEEEcCCCCH-------
Confidence 4567789999999999996 5565555555544443 34555443 22222455555555 79998774332
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 321 VTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 321 ~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.+++.|+++|.|++..+. . . +++..|...|+|.+.+=
T Consensus 100 -------~v~~~~~~~g~~~i~G~~---t-----~--------~e~~~A~~~Gad~v~~F 136 (214)
T 1wbh_A 100 -------PLLKAATEGTIPLIPGIS---T-----V--------SELMLGMDYGLKEFKFF 136 (214)
T ss_dssp -------HHHHHHHHSSSCEEEEES---S-----H--------HHHHHHHHTTCCEEEET
T ss_pred -------HHHHHHHHhCCCEEEecC---C-----H--------HHHHHHHHCCCCEEEEe
Confidence 478889999999987533 2 2 56677889999999886
No 79
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=86.82 E-value=11 Score=37.40 Aligned_cols=112 Identities=12% Similarity=0.064 Sum_probs=71.4
Q ss_pred HHHHHHHcCCcEEEEc-ccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccc-cCChHH
Q psy6272 244 VVDLIVREAVDIIIMS-SVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAV-ATSVEV 321 (547)
Q Consensus 244 di~~~~~~g~d~I~~s-fV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg~-e~~~e~ 321 (547)
.+..+...|+|+|.+. -.-+.+++.++.+...+.|- .+++-+-|.+-++...+ .-+|.|-+...||.. +.+++.
T Consensus 127 qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl--~~lvev~t~ee~~~A~~--~Gad~IGv~~r~l~~~~~dl~~ 202 (272)
T 3qja_A 127 QIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGM--TALVEVHTEQEADRALK--AGAKVIGVNARDLMTLDVDRDC 202 (272)
T ss_dssp HHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHH--HTCSEEEEESBCTTTCCBCTTH
T ss_pred HHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCC--cEEEEcCCHHHHHHHHH--CCCCEEEECCCcccccccCHHH
Confidence 4778889999999982 33346677777777766544 45556655544433322 127999999777642 233443
Q ss_pred HHHHHHHHHHHHHHc--CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 322 TFLAQKMIAARCNKQ--GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 322 v~~~qk~ii~~c~~~--gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
+.. + +... ++|++....+- | . .|+......|+|++++.
T Consensus 203 ~~~----l---~~~v~~~~pvVaegGI~---t---~--------edv~~l~~~GadgvlVG 242 (272)
T 3qja_A 203 FAR----I---APGLPSSVIRIAESGVR---G---T--------ADLLAYAGAGADAVLVG 242 (272)
T ss_dssp HHH----H---GGGSCTTSEEEEESCCC---S---H--------HHHHHHHHTTCSEEEEC
T ss_pred HHH----H---HHhCcccCEEEEECCCC---C---H--------HHHHHHHHcCCCEEEEc
Confidence 322 2 2233 78988876532 1 2 67788888899999997
No 80
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=86.59 E-value=4.5 Score=40.28 Aligned_cols=132 Identities=12% Similarity=0.120 Sum_probs=76.6
Q ss_pred CChhhHHHH-HHHHHcCCcEEEEcccCChh------hHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEE
Q psy6272 237 IADRDKHVV-DLIVREAVDIIIMSSVTGAN------SIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVL 308 (547)
Q Consensus 237 lt~~D~~di-~~~~~~g~d~I~~sfV~sa~------di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImI 308 (547)
++..++..| +.+.+.|++.|-+.+-.+.+ +..++-+.+.+. .++++.+.+-+. +.++..++. .|.|+|
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~~~~v~~l~~n~---~~i~~a~~~G~~~V~i 98 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-DGVRYSVLVPNM---KGYEAAAAAHADEIAV 98 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-SSSEEEEECSSH---HHHHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-CCCEEEEEeCCH---HHHHHHHHCCCCEEEE
Confidence 566666554 56666899999885433333 444444444332 466666665443 333333433 577777
Q ss_pred cCCcccc---------cCChHHHHHHHHHHHHHHHHcCCcEE--EEcCC-CCCCCcccccccCccchhhHH-HHHHhCcc
Q psy6272 309 NRIQLAV---------ATSVEVTFLAQKMIAARCNKQGKPFL--VVGDI-LPDHNVEEYSDVSIGDMNDVN-SIVQDGAD 375 (547)
Q Consensus 309 argDLg~---------e~~~e~v~~~qk~ii~~c~~~gKPvi--~aTq~-Le~PtraE~~~~~~~~~~Dv~-nav~~g~D 375 (547)
. ++. ..+.++....-+++++.|+++|++|- +.+-. .|+-+|.+. .+.-+++ .+...|+|
T Consensus 99 ~---~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~-----~~~~~~~~~~~~~G~d 170 (295)
T 1ydn_A 99 F---ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTP-----QAVASVTEQLFSLGCH 170 (295)
T ss_dssp E---EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCH-----HHHHHHHHHHHHHTCS
T ss_pred E---EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCH-----HHHHHHHHHHHhcCCC
Confidence 4 222 35677777777889999999999986 33211 011122222 1114444 24467999
Q ss_pred EEeeC
Q psy6272 376 VVVLT 380 (547)
Q Consensus 376 ~vmLs 380 (547)
.+.|.
T Consensus 171 ~i~l~ 175 (295)
T 1ydn_A 171 EVSLG 175 (295)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99997
No 81
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=86.50 E-value=14 Score=34.61 Aligned_cols=111 Identities=14% Similarity=0.204 Sum_probs=62.4
Q ss_pred HHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccccC-ChHHHH
Q psy6272 245 VDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVAT-SVEVTF 323 (547)
Q Consensus 245 i~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg~e~-~~e~v~ 323 (547)
++.+.+.|+|+|.+..- ...++.+++... ...+.+-+.|.+-+... ...-+|.|++++.--+... |.. +
T Consensus 81 ~~~a~~~gad~v~l~~~--~~~~~~~~~~~~----~~~ig~sv~t~~~~~~a--~~~gaD~i~~~~~f~~~~~~g~~--~ 150 (221)
T 1yad_A 81 VDIALFSTIHRVQLPSG--SFSPKQIRARFP----HLHIGRSVHSLEEAVQA--EKEDADYVLFGHVFETDCKKGLE--G 150 (221)
T ss_dssp HHHHHTTTCCEEEECTT--SCCHHHHHHHCT----TCEEEEEECSHHHHHHH--HHTTCSEEEEECCC------------
T ss_pred HHHHHHcCCCEEEeCCC--ccCHHHHHHHCC----CCEEEEEcCCHHHHHHH--HhCCCCEEEECCccccCCCCCCC--C
Confidence 35688899999998753 234566665432 34555556554433222 1223799999873111110 000 0
Q ss_pred HHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 324 LAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 324 ~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.--+.+-+.++..++|++.+..+ + . .++..++..|+|++.++
T Consensus 151 ~~~~~l~~~~~~~~~pvia~GGI----~---~--------~nv~~~~~~Ga~gv~vg 192 (221)
T 1yad_A 151 RGVSLLSDIKQRISIPVIAIGGM----T---P--------DRLRDVKQAGADGIAVM 192 (221)
T ss_dssp CHHHHHHHHHHHCCSCEEEESSC----C---G--------GGHHHHHHTTCSEEEES
T ss_pred CCHHHHHHHHHhCCCCEEEECCC----C---H--------HHHHHHHHcCCCEEEEh
Confidence 01122223344458999998774 2 2 56677778899999998
No 82
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=86.34 E-value=12 Score=36.93 Aligned_cols=124 Identities=16% Similarity=0.178 Sum_probs=66.4
Q ss_pred hhhHHHHH-HHHH-cCCcEEEEccc------------CChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh--
Q psy6272 239 DRDKHVVD-LIVR-EAVDIIIMSSV------------TGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-- 302 (547)
Q Consensus 239 ~~D~~di~-~~~~-~g~d~I~~sfV------------~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-- 302 (547)
..+..... .+.+ .|+|+|-+.|- .+.+.+.++.+.+.+.- ++.++.|+= -.+.++.++++.
T Consensus 110 ~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~-~~pv~vk~~--~~~~~~~~~a~~l~ 186 (311)
T 1ep3_A 110 EADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVS-KVPLYVKLS--PNVTDIVPIAKAVE 186 (311)
T ss_dssp HHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHC-SSCEEEEEC--SCSSCSHHHHHHHH
T ss_pred HHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhc-CCCEEEEEC--CChHHHHHHHHHHH
Confidence 34444444 3444 89999977542 23333344444443321 467888874 122333343322
Q ss_pred ---cCEEEEcCC------cc-----------cccCChHHHHHHHHHHHHHHH-HcCCcEEEEcCCCCCCCcccccccCcc
Q psy6272 303 ---SDGVVLNRI------QL-----------AVATSVEVTFLAQKMIAARCN-KQGKPFLVVGDILPDHNVEEYSDVSIG 361 (547)
Q Consensus 303 ---~DgImIarg------DL-----------g~e~~~e~v~~~qk~ii~~c~-~~gKPvi~aTq~Le~PtraE~~~~~~~ 361 (547)
+|+|.+.-+ |. +.-.|....+... ..+..++ ..++|++.+..+- ..
T Consensus 187 ~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~-~~i~~i~~~~~ipvia~GGI~------~~------ 253 (311)
T 1ep3_A 187 AAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVAL-KLIHQVAQDVDIPIIGMGGVA------NA------ 253 (311)
T ss_dssp HTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHH-HHHHHHHTTCSSCEEECSSCC------SH------
T ss_pred HcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHH-HHHHHHHHhcCCCEEEECCcC------CH------
Confidence 699998321 11 0001222222222 2333333 4489999876632 23
Q ss_pred chhhHHHHHHhCccEEeeC
Q psy6272 362 DMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 362 ~~~Dv~nav~~g~D~vmLs 380 (547)
.|+..++..|||+|++.
T Consensus 254 --~d~~~~l~~GAd~V~vg 270 (311)
T 1ep3_A 254 --QDVLEMYMAGASAVAVG 270 (311)
T ss_dssp --HHHHHHHHHTCSEEEEC
T ss_pred --HHHHHHHHcCCCEEEEC
Confidence 78888899999999998
No 83
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=85.83 E-value=5.4 Score=38.61 Aligned_cols=116 Identities=13% Similarity=0.057 Sum_probs=70.1
Q ss_pred hHHHHHHHHHcCCcEEEEccc--CChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccc--
Q psy6272 241 DKHVVDLIVREAVDIIIMSSV--TGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAV-- 315 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sfV--~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~-- 315 (547)
..+++..+++.|+|+|.+--. .+++.+.++.+.+.+. .+.+++.+-|.+-.+.. .+. +|.|.+.--.+.-
T Consensus 90 ~~~~i~~~~~aGad~I~l~~~~~~~p~~l~~~i~~~~~~--g~~v~~~v~t~eea~~a---~~~Gad~Ig~~~~g~t~~~ 164 (229)
T 3q58_A 90 YLQDVDALAQAGADIIAFDASFRSRPVDIDSLLTRIRLH--GLLAMADCSTVNEGISC---HQKGIEFIGTTLSGYTGPI 164 (229)
T ss_dssp SHHHHHHHHHHTCSEEEEECCSSCCSSCHHHHHHHHHHT--TCEEEEECSSHHHHHHH---HHTTCSEEECTTTTSSSSC
T ss_pred cHHHHHHHHHcCCCEEEECccccCChHHHHHHHHHHHHC--CCEEEEecCCHHHHHHH---HhCCCCEEEecCccCCCCC
Confidence 355678889999999976433 4667777777777654 56777776554433322 223 6888643211211
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 316 ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 316 e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
......+.. +....+.++||+....+- | . .|+..+...|+|++++.
T Consensus 165 ~~~~~~~~l-----i~~l~~~~ipvIA~GGI~---t---~--------~d~~~~~~~GadgV~VG 210 (229)
T 3q58_A 165 TPVEPDLAM-----VTQLSHAGCRVIAEGRYN---T---P--------ALAANAIEHGAWAVTVG 210 (229)
T ss_dssp CCSSCCHHH-----HHHHHTTTCCEEEESSCC---S---H--------HHHHHHHHTTCSEEEEC
T ss_pred cCCCCCHHH-----HHHHHHcCCCEEEECCCC---C---H--------HHHHHHHHcCCCEEEEc
Confidence 011112211 222222389999876632 1 2 78888888999999996
No 84
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=85.83 E-value=3.6 Score=40.96 Aligned_cols=120 Identities=13% Similarity=0.100 Sum_probs=74.0
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHH-HHhhHHHHHhhcCEEEEcCCcccccCChH
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLL-GMEYMDEIIMESDGVVLNRIQLAVATSVE 320 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~-av~nldeIl~~~DgImIargDLg~e~~~e 320 (547)
..-++.+.+.|+|++++|=.- .++..++++.+.+.|-+...++ ++. ..+.+..|++.++|.+---.=.|+ .|..
T Consensus 113 e~f~~~~~~aGvdgvii~Dlp-~ee~~~~~~~~~~~gl~~i~li---aP~t~~eri~~i~~~~~gfvY~vS~~Gv-TG~~ 187 (267)
T 3vnd_A 113 DEFYTKAQAAGVDSVLIADVP-VEESAPFSKAAKAHGIAPIFIA---PPNADADTLKMVSEQGEGYTYLLSRAGV-TGTE 187 (267)
T ss_dssp HHHHHHHHHHTCCEEEETTSC-GGGCHHHHHHHHHTTCEEECEE---CTTCCHHHHHHHHHHCCSCEEESCCCCC-C---
T ss_pred HHHHHHHHHcCCCEEEeCCCC-HhhHHHHHHHHHHcCCeEEEEE---CCCCCHHHHHHHHHhCCCcEEEEecCCC-CCCc
Confidence 345677889999999998543 4678888888887775432222 232 357899999998755433111111 1221
Q ss_pred -HHHHHHHHHHHHHHHc-CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 321 -VTFLAQKMIAARCNKQ-GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 321 -~v~~~qk~ii~~c~~~-gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.+..-....++.++++ ..|+++...+= | - .++..++..|+|+++..
T Consensus 188 ~~~~~~~~~~v~~vr~~~~~pv~vGfGI~---~---~--------e~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 188 SKAGEPIENILTQLAEFNAPPPLLGFGIA---E---P--------EQVRAAIKAGAAGAISG 235 (267)
T ss_dssp -----CHHHHHHHHHTTTCCCEEECSSCC---S---H--------HHHHHHHHTTCSEEEEC
T ss_pred cCCcHHHHHHHHHHHHhcCCCEEEECCcC---C---H--------HHHHHHHHcCCCEEEEC
Confidence 1222234455666654 68999876521 1 1 56666888999999998
No 85
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=85.82 E-value=9.9 Score=39.32 Aligned_cols=137 Identities=12% Similarity=0.052 Sum_probs=76.8
Q ss_pred HcCCcEEEEccc-----------CChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHh------hcCEEEEc---
Q psy6272 250 REAVDIIIMSSV-----------TGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIM------ESDGVVLN--- 309 (547)
Q Consensus 250 ~~g~d~I~~sfV-----------~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~------~~DgImIa--- 309 (547)
+.|+|+|-+.+= .+++.+.++-+.+.+. -++.|++||=----..++.+++. -+|+|.+-
T Consensus 153 ~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~-~~~PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~ 231 (354)
T 4ef8_A 153 TEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEV-YPHSFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSI 231 (354)
T ss_dssp HHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHH-CCSCEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCE
T ss_pred hcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHh-hCCCeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEeccc
Confidence 358999887642 3445555554445433 35789999864323344555554 25777641
Q ss_pred -CC---cc---------cccC----ChHHHHHHHHHHHHHHHHc--CCcEEEEcCCCCCCCcccccccCccchhhHHHHH
Q psy6272 310 -RI---QL---------AVAT----SVEVTFLAQKMIAARCNKQ--GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIV 370 (547)
Q Consensus 310 -rg---DL---------g~e~----~~e~v~~~qk~ii~~c~~~--gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav 370 (547)
+| |+ .... |..--+...+ +++..+++ ..|+|....+. .. .|+..++
T Consensus 232 ~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~-~i~~v~~~~~~ipII~~GGI~------s~--------~da~~~l 296 (354)
T 4ef8_A 232 GNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALA-NINAFYRRCPGKLIFGCGGVY------TG--------EDAFLHV 296 (354)
T ss_dssp EEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHH-HHHHHHHHCTTSEEEEESCCC------SH--------HHHHHHH
T ss_pred CcceeeeccCCccccccccccCCCCCCCCchHHHH-HHHHHHHhCCCCCEEEECCcC------CH--------HHHHHHH
Confidence 10 10 0010 1112233333 44444443 58999877643 24 8889999
Q ss_pred HhCccEEeeCCcchHHHHHHHHHHHHHHhhhhh
Q psy6272 371 QDGADVVVLTQSEQAHHRVDILKEILKKTESVL 403 (547)
Q Consensus 371 ~~g~D~vmLsk~Eta~eaV~~m~~I~~~aE~~~ 403 (547)
..|||+||+. .-...+-..++.+|.+..+..+
T Consensus 297 ~aGAd~V~vg-ra~l~~GP~~~~~i~~~l~~~m 328 (354)
T 4ef8_A 297 LAGASMVQVG-TALQEEGPSIFERLTSELLGVM 328 (354)
T ss_dssp HHTEEEEEEC-HHHHHHCTTHHHHHHHHHHHHH
T ss_pred HcCCCEEEEh-HHHHHhCHHHHHHHHHHHHHHH
Confidence 9999999998 3322233456666766666543
No 86
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=85.71 E-value=4.1 Score=37.86 Aligned_cols=115 Identities=17% Similarity=0.172 Sum_probs=65.4
Q ss_pred HHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEe--cCHHH-HhhHHHHHhhcCEEEEcCCcccccCChH
Q psy6272 244 VVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKI--ETLLG-MEYMDEIIMESDGVVLNRIQLAVATSVE 320 (547)
Q Consensus 244 di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakI--Et~~a-v~nldeIl~~~DgImIargDLg~e~~~e 320 (547)
.++.+.+.|+|+|.++.-...+.+.++++.+.+.|..+. ++-. .|+.. ++.+.+. -+|.|-+.++-.+...|..
T Consensus 69 ~~~~a~~~Gad~v~vh~~~~~~~~~~~~~~~~~~g~~~g-v~~~s~~~p~~~~~~~~~~--g~d~v~~~~~~~~~~~g~~ 145 (207)
T 3ajx_A 69 EADIAFKAGADLVTVLGSADDSTIAGAVKAAQAHNKGVV-VDLIGIEDKATRAQEVRAL--GAKFVEMHAGLDEQAKPGF 145 (207)
T ss_dssp HHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEE-EECTTCSSHHHHHHHHHHT--TCSEEEEECCHHHHTSTTC
T ss_pred HHHHHHhCCCCEEEEeccCChHHHHHHHHHHHHcCCceE-EEEecCCChHHHHHHHHHh--CCCEEEEEecccccccCCC
Confidence 357888999999998766666788888888876655432 2221 12222 3333222 2688734334332222221
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 321 VTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 321 ~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
-.. +++-+.+.. ..|+++...+ +| .++..++..|+|++...
T Consensus 146 ~~~---~~i~~~~~~-~~pi~v~GGI--~~-------------~~~~~~~~aGad~vvvG 186 (207)
T 3ajx_A 146 DLN---GLLAAGEKA-RVPFSVAGGV--KV-------------ATIPAVQKAGAEVAVAG 186 (207)
T ss_dssp CTH---HHHHHHHHH-TSCEEEESSC--CG-------------GGHHHHHHTTCSEEEES
T ss_pred chH---HHHHHhhCC-CCCEEEECCc--CH-------------HHHHHHHHcCCCEEEEe
Confidence 111 333333333 7888775442 11 34566788899999987
No 87
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=85.57 E-value=4.3 Score=40.50 Aligned_cols=118 Identities=14% Similarity=0.158 Sum_probs=73.2
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHH-HHhhHHHHHhhcCEEEE--cCCc-ccccC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLL-GMEYMDEIIMESDGVVL--NRIQ-LAVAT 317 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~-av~nldeIl~~~DgImI--argD-Lg~e~ 317 (547)
..-++.+.+.|+|++++|=.- .++..++++.+.+.|-+...++ ++. ..+.+.+|.+.+.|++- .+-. =|..-
T Consensus 115 ~~f~~~~~~aGvdGvIipDlp-~ee~~~~~~~~~~~gl~~I~lv---ap~t~~eri~~i~~~~~gfiY~vs~~GvTG~~~ 190 (271)
T 3nav_A 115 DDFYQRCQKAGVDSVLIADVP-TNESQPFVAAAEKFGIQPIFIA---PPTASDETLRAVAQLGKGYTYLLSRAGVTGAET 190 (271)
T ss_dssp HHHHHHHHHHTCCEEEETTSC-GGGCHHHHHHHHHTTCEEEEEE---CTTCCHHHHHHHHHHCCSCEEECCCC-------
T ss_pred HHHHHHHHHCCCCEEEECCCC-HHHHHHHHHHHHHcCCeEEEEE---CCCCCHHHHHHHHHHCCCeEEEEeccCCCCccc
Confidence 344778889999999998553 3668888888887765532222 232 35788899988865542 2211 11111
Q ss_pred ChHHHHHHHHHHHHHHHHc-CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 318 SVEVTFLAQKMIAARCNKQ-GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 318 ~~e~v~~~qk~ii~~c~~~-gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.++.-....++..+++ ..|+++...+ -| - .++..++..|+|+++..
T Consensus 191 ---~~~~~~~~~v~~vr~~~~~Pv~vGfGI---st---~--------e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 191 ---KANMPVHALLERLQQFDAPPALLGFGI---SE---P--------AQVKQAIEAGAAGAISG 237 (271)
T ss_dssp ----CCHHHHHHHHHHHHTTCCCEEECSSC---CS---H--------HHHHHHHHTTCSEEEES
T ss_pred ---CCchhHHHHHHHHHHhcCCCEEEECCC---CC---H--------HHHHHHHHcCCCEEEEC
Confidence 1122234455666665 6899986652 11 1 66676889999999998
No 88
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=85.49 E-value=8.8 Score=35.85 Aligned_cols=118 Identities=14% Similarity=0.108 Sum_probs=67.4
Q ss_pred HHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEE-c--CCcccccCChH
Q psy6272 244 VVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVL-N--RIQLAVATSVE 320 (547)
Q Consensus 244 di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImI-a--rgDLg~e~~~e 320 (547)
.++.+.+.|+|+|.+.--.. +...++.+.+.+.| ..++.-+-+....+.+.++...+|.|++ + +|==|...+..
T Consensus 76 ~i~~~~~~gad~v~vh~~~~-~~~~~~~~~~~~~g--~~i~~~~~~~t~~e~~~~~~~~~d~vl~~~~~~g~~g~~~~~~ 152 (220)
T 2fli_A 76 YVEAFAQAGADIMTIHTEST-RHIHGALQKIKAAG--MKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPE 152 (220)
T ss_dssp GHHHHHHHTCSEEEEEGGGC-SCHHHHHHHHHHTT--SEEEEEECTTSCGGGGGGGTTTCSEEEEESSCTTCSSCCCCGG
T ss_pred HHHHHHHcCCCEEEEccCcc-ccHHHHHHHHHHcC--CcEEEEEcCCCCHHHHHHHHhhCCEEEEEEECCCCcccccCHH
Confidence 36888899999999876555 55666666665554 3444445333334445555566897755 2 22113333432
Q ss_pred HHHHHHHHHHHHHHHc--CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 321 VTFLAQKMIAARCNKQ--GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 321 ~v~~~qk~ii~~c~~~--gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.+..+ +++-+.+... +.|++++..+ +| .++..+...|+|++..+
T Consensus 153 ~~~~i-~~~~~~~~~~~~~~~i~v~GGI--~~-------------~~~~~~~~~Gad~vvvG 198 (220)
T 2fli_A 153 CLEKV-ATVAKWRDEKGLSFDIEVDGGV--DN-------------KTIRACYEAGANVFVAG 198 (220)
T ss_dssp GHHHH-HHHHHHHHHTTCCCEEEEESSC--CT-------------TTHHHHHHHTCCEEEES
T ss_pred HHHHH-HHHHHHHHhcCCCceEEEECcC--CH-------------HHHHHHHHcCCCEEEEC
Confidence 22222 2233333333 6788776553 22 44455666699999998
No 89
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=85.27 E-value=4.6 Score=39.49 Aligned_cols=120 Identities=12% Similarity=0.031 Sum_probs=76.1
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhc---------CCCceEEEEecCHHHHhhHHHHHhhcCEEEE---c
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDH---------VDRVLILAKIETLLGMEYMDEIIMESDGVVL---N 309 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~---------~~~i~IiakIEt~~av~nldeIl~~~DgImI---a 309 (547)
...++.+.+.|+|+|.+..-.+ +++.++.+.+.+. |..+.+...-+|+ ++.+++++..+|.|.+ .
T Consensus 82 ~~~i~~~~~aGAd~itvH~ea~-~~~~~~i~~i~~~~~~~~~~~~g~~~gv~l~p~Tp--~~~l~~~l~~~D~vlvMsv~ 158 (237)
T 3cu2_A 82 LEVAKAVVANGANLVTLQLEQY-HDFALTIEWLAKQKTTYANQVYPVLIGACLCPETP--ISELEPYLDQIDVIQLLTLD 158 (237)
T ss_dssp HHHHHHHHHTTCSEEEEETTCT-TSHHHHHHHHTTCEEEETTEEEECEEEEEECTTSC--GGGGTTTTTTCSEEEEESEE
T ss_pred HHHHHHHHHcCCCEEEEecCCc-ccHHHHHHHHHhcccccccccCCceEEEEEeCCCh--HHHHHHHhhcCceeeeeeec
Confidence 4568889999999999886555 6677777777766 5555555444554 6677788888998877 6
Q ss_pred CCcccccCChHHHHHHHHHHHHHHHH--cCCcEEEEcCCCCCCCcccccccCccchhhHHHHHH--hCccEEeeC
Q psy6272 310 RIQLAVATSVEVTFLAQKMIAARCNK--QGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQ--DGADVVVLT 380 (547)
Q Consensus 310 rgDLg~e~~~e~v~~~qk~ii~~c~~--~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~--~g~D~vmLs 380 (547)
||==|... .+....--+++-+.+.+ .+.|+.+...+= . ..+..++. .|+|++...
T Consensus 159 pgfggq~f-~~~~l~ki~~lr~~~~~~~~~~~I~vdGGI~-------~--------~~~~~~~~~~aGad~~VvG 217 (237)
T 3cu2_A 159 PRNGTKYP-SELILDRVIQVEKRLGNRRVEKLINIDGSMT-------L--------ELAKYFKQGTHQIDWLVSG 217 (237)
T ss_dssp TTTTEECC-HHHHHHHHHHHHHHHGGGGGGCEEEEESSCC-------H--------HHHHHHHHSSSCCCCEEEC
T ss_pred cCcCCeec-ChhHHHHHHHHHHHHHhcCCCceEEEECCcC-------H--------HHHHHHHHhCCCCcEEEEe
Confidence 65333333 22222222333333332 257777655431 1 45566777 799999986
No 90
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=84.67 E-value=8.4 Score=36.50 Aligned_cols=103 Identities=12% Similarity=0.133 Sum_probs=68.4
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccccCChH
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAVATSVE 320 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~e~~~e 320 (547)
.+.++.+++.|++.|-+.+ ++....+.++... + .++.+-+.. .---+.++.-++. +|++..+-.|.
T Consensus 28 ~~~~~~l~~gGv~~iel~~-k~~~~~~~i~~~~-~--~~~~~gag~--vl~~d~~~~A~~~GAd~v~~~~~d~------- 94 (207)
T 2yw3_A 28 LGLARVLEEEGVGALEITL-RTEKGLEALKALR-K--SGLLLGAGT--VRSPKEAEAALEAGAAFLVSPGLLE------- 94 (207)
T ss_dssp HHHHHHHHHTTCCEEEEEC-SSTHHHHHHHHHT-T--SSCEEEEES--CCSHHHHHHHHHHTCSEEEESSCCH-------
T ss_pred HHHHHHHHHcCCCEEEEeC-CChHHHHHHHHHh-C--CCCEEEeCe--EeeHHHHHHHHHcCCCEEEcCCCCH-------
Confidence 4557788899999999996 5555555454433 3 445444432 2222555555555 79998764333
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 321 VTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 321 ~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.+++.|+++|+|++..+. | . +++..|...|+|.+.+-
T Consensus 95 -------~v~~~~~~~g~~~i~G~~-----t---~--------~e~~~A~~~Gad~v~~f 131 (207)
T 2yw3_A 95 -------EVAALAQARGVPYLPGVL-----T---P--------TEVERALALGLSALKFF 131 (207)
T ss_dssp -------HHHHHHHHHTCCEEEEEC-----S---H--------HHHHHHHHTTCCEEEET
T ss_pred -------HHHHHHHHhCCCEEecCC-----C---H--------HHHHHHHHCCCCEEEEe
Confidence 377889999999886532 1 3 66677889999999886
No 91
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=84.30 E-value=9.8 Score=37.61 Aligned_cols=117 Identities=15% Similarity=0.145 Sum_probs=76.8
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCC-ceEEEEecCHHHHhhHHHHHhhcCEE--EEcCCcccccCC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDR-VLILAKIETLLGMEYMDEIIMESDGV--VLNRIQLAVATS 318 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~-i~IiakIEt~~av~nldeIl~~~DgI--mIargDLg~e~~ 318 (547)
..-++.+.+.|+|++++|-. -.++..++++.+.+.|-+ +.+++ -....+.+.+|.+.++|. ++.+ .| -.|
T Consensus 106 e~F~~~~~~aGvdG~IipDL-P~eE~~~~~~~~~~~Gl~~I~lva---P~t~~eRi~~ia~~a~gFiY~Vs~--~G-vTG 178 (252)
T 3tha_A 106 EKFVKKAKSLGICALIVPEL-SFEESDDLIKECERYNIALITLVS---VTTPKERVKKLVKHAKGFIYLLAS--IG-ITG 178 (252)
T ss_dssp HHHHHHHHHTTEEEEECTTC-CGGGCHHHHHHHHHTTCEECEEEE---TTSCHHHHHHHHTTCCSCEEEECC--SC-SSS
T ss_pred HHHHHHHHHcCCCEEEeCCC-CHHHHHHHHHHHHHcCCeEEEEeC---CCCcHHHHHHHHHhCCCeEEEEec--CC-CCC
Confidence 34467888999999999987 456788888888877754 33332 122368889999998776 3332 11 122
Q ss_pred h-HHHHHHHHHHHHHHHHc-CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 319 V-EVTFLAQKMIAARCNKQ-GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 319 ~-e~v~~~qk~ii~~c~~~-gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
. ..+..-.+..+++.+++ ++|+++...+ -+. .++.. +..+||++...
T Consensus 179 ~~~~~~~~~~~~v~~vr~~~~~Pv~vGfGI---st~-----------e~a~~-~~~~ADGVIVG 227 (252)
T 3tha_A 179 TKSVEEAILQDKVKEIRSFTNLPIFVGFGI---QNN-----------QDVKR-MRKVADGVIVG 227 (252)
T ss_dssp CSHHHHHHHHHHHHHHHTTCCSCEEEESSC---CSH-----------HHHHH-HTTTSSEEEEC
T ss_pred cccCCCHHHHHHHHHHHHhcCCcEEEEcCc---CCH-----------HHHHH-HHhcCCEEEEC
Confidence 2 23444456677777765 7899998763 221 44443 45689999998
No 92
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=84.26 E-value=22 Score=36.08 Aligned_cols=30 Identities=17% Similarity=0.282 Sum_probs=24.9
Q ss_pred CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 337 GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 337 gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
++|+|....+- .- .|+..++..|||+|++.
T Consensus 251 ~ipvia~GGI~------~~--------~d~~k~l~~GAd~V~iG 280 (349)
T 1p0k_A 251 ASTMIASGGLQ------DA--------LDVAKAIALGASCTGMA 280 (349)
T ss_dssp TSEEEEESSCC------SH--------HHHHHHHHTTCSEEEEC
T ss_pred CCeEEEECCCC------CH--------HHHHHHHHcCCCEEEEc
Confidence 79999877643 23 88999999999999998
No 93
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=84.13 E-value=11 Score=35.55 Aligned_cols=116 Identities=13% Similarity=0.176 Sum_probs=64.0
Q ss_pred hHHHHHHHHHcCCcEEEEcc--cCChhhHHHHHHHHHhcCC-Cce-----------EEEEecC------HHHHhhHHHHH
Q psy6272 241 DKHVVDLIVREAVDIIIMSS--VTGANSIREMRGMLEDHVD-RVL-----------ILAKIET------LLGMEYMDEII 300 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sf--V~sa~di~~~r~~l~~~~~-~i~-----------IiakIEt------~~av~nldeIl 300 (547)
+.++++.+++.|+|+|.+.. ..+++.+.++.+. .+. .+. +..++.. ...++.+..+.
T Consensus 88 ~~~~~~~~~~~Gad~V~i~~~~~~~~~~~~~~~~~---~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~ 164 (253)
T 1h5y_A 88 SLEDATTLFRAGADKVSVNTAAVRNPQLVALLARE---FGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVE 164 (253)
T ss_dssp SHHHHHHHHHHTCSEEEESHHHHHCTHHHHHHHHH---HCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEChHHhhCcHHHHHHHHH---cCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHH
Confidence 34567888889999999763 3334434444333 332 121 1233321 12334455555
Q ss_pred hh-cCEEEEcCCcc---cccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccE
Q psy6272 301 ME-SDGVVLNRIQL---AVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADV 376 (547)
Q Consensus 301 ~~-~DgImIargDL---g~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~ 376 (547)
+. +|.|.+..-+. .....++.+.. + ++..+.|++....+- .. .|+..+...|+|+
T Consensus 165 ~~G~d~i~~~~~~~~g~~~~~~~~~i~~----l---~~~~~~pvia~GGi~------~~--------~~~~~~~~~Ga~~ 223 (253)
T 1h5y_A 165 ELGAGEILLTSIDRDGTGLGYDVELIRR----V---ADSVRIPVIASGGAG------RV--------EHFYEAAAAGADA 223 (253)
T ss_dssp HHTCSEEEEEETTTTTTCSCCCHHHHHH----H---HHHCSSCEEEESCCC------SH--------HHHHHHHHTTCSE
T ss_pred hCCCCEEEEecccCCCCcCcCCHHHHHH----H---HHhcCCCEEEeCCCC------CH--------HHHHHHHHcCCcH
Confidence 55 79988753332 11222233322 2 233589999876632 13 6777777789999
Q ss_pred EeeC
Q psy6272 377 VVLT 380 (547)
Q Consensus 377 vmLs 380 (547)
+++.
T Consensus 224 v~vg 227 (253)
T 1h5y_A 224 VLAA 227 (253)
T ss_dssp EEES
T ss_pred HHHH
Confidence 9997
No 94
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=83.49 E-value=14 Score=35.16 Aligned_cols=119 Identities=13% Similarity=0.154 Sum_probs=67.3
Q ss_pred hHHHHHHHHHcCCcEEEEcc--cCChhhHHHHHHHHHhcCCCceEEE---------EecCH--------HHHhhHHHHHh
Q psy6272 241 DKHVVDLIVREAVDIIIMSS--VTGANSIREMRGMLEDHVDRVLILA---------KIETL--------LGMEYMDEIIM 301 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sf--V~sa~di~~~r~~l~~~~~~i~Iia---------kIEt~--------~av~nldeIl~ 301 (547)
+.++++.+++.|+|+|++.- ..+++.+.++.+.... +.+.+-. ++++. ..++.+.++.+
T Consensus 86 ~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~~~--~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~ 163 (252)
T 1ka9_F 86 SLEDARKLLLSGADKVSVNSAAVRRPELIRELADHFGA--QAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVE 163 (252)
T ss_dssp SHHHHHHHHHHTCSEEEECHHHHHCTHHHHHHHHHHCG--GGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEChHHHhCcHHHHHHHHHcCC--CcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHH
Confidence 35678888899999999864 5556666666655531 1221111 12211 22444555555
Q ss_pred h-cCEEEEcC-CcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEee
Q psy6272 302 E-SDGVVLNR-IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVL 379 (547)
Q Consensus 302 ~-~DgImIar-gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmL 379 (547)
. +++|++.. +-=+...|+ .+.. +-+.++..++|++....+- .. .|+......|+|++|+
T Consensus 164 ~G~~~i~~~~~~~~g~~~g~-~~~~----i~~l~~~~~ipvia~GGI~------~~--------~d~~~~~~~Gadgv~v 224 (252)
T 1ka9_F 164 LGAGEILLTSMDRDGTKEGY-DLRL----TRMVAEAVGVPVIASGGAG------RM--------EHFLEAFQAGAEAALA 224 (252)
T ss_dssp HTCCEEEEEETTTTTTCSCC-CHHH----HHHHHHHCSSCEEEESCCC------SH--------HHHHHHHHTTCSEEEE
T ss_pred cCCCEEEEecccCCCCcCCC-CHHH----HHHHHHHcCCCEEEeCCCC------CH--------HHHHHHHHCCCHHHHH
Confidence 5 78888752 100222232 1111 1122345689999877632 13 6677777779999999
Q ss_pred C
Q psy6272 380 T 380 (547)
Q Consensus 380 s 380 (547)
.
T Consensus 225 g 225 (252)
T 1ka9_F 225 A 225 (252)
T ss_dssp S
T ss_pred H
Confidence 7
No 95
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=83.43 E-value=10 Score=36.91 Aligned_cols=105 Identities=13% Similarity=0.093 Sum_probs=62.9
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccccCChH
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAVATSVE 320 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~e~~~e 320 (547)
....+.+++.|+..|=+++ ++++..+.++.+-++. .++.|=+ -|..-.+..+..+++ +|.|+. ++
T Consensus 49 ~~~a~al~~gGi~~iEvt~-~t~~a~e~I~~l~~~~-~~~~iGa--GTVlt~~~a~~Ai~AGA~fIvs-P~--------- 114 (232)
T 4e38_A 49 IPLGKVLAENGLPAAEITF-RSDAAVEAIRLLRQAQ-PEMLIGA--GTILNGEQALAAKEAGATFVVS-PG--------- 114 (232)
T ss_dssp HHHHHHHHHTTCCEEEEET-TSTTHHHHHHHHHHHC-TTCEEEE--ECCCSHHHHHHHHHHTCSEEEC-SS---------
T ss_pred HHHHHHHHHCCCCEEEEeC-CCCCHHHHHHHHHHhC-CCCEEeE--CCcCCHHHHHHHHHcCCCEEEe-CC---------
Confidence 3344567777888888776 4555444444433322 2333332 244445555555555 566653 33
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 321 VTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 321 ~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.-..+++.|+++|.|++-... | . +++..|...|+|.+-+-
T Consensus 115 ----~~~~vi~~~~~~gi~~ipGv~-----T---p--------tEi~~A~~~Gad~vK~F 154 (232)
T 4e38_A 115 ----FNPNTVRACQEIGIDIVPGVN-----N---P--------STVEAALEMGLTTLKFF 154 (232)
T ss_dssp ----CCHHHHHHHHHHTCEEECEEC-----S---H--------HHHHHHHHTTCCEEEEC
T ss_pred ----CCHHHHHHHHHcCCCEEcCCC-----C---H--------HHHHHHHHcCCCEEEEC
Confidence 123577889999999854211 1 2 77789999999999887
No 96
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=83.32 E-value=12 Score=35.81 Aligned_cols=117 Identities=15% Similarity=0.209 Sum_probs=64.7
Q ss_pred hHHHHHHHHHcCCcEEEEcc--cCChhhHHHHHHHHHhcCCCceEE--EE-------ecCH--------HHHhhHHHHHh
Q psy6272 241 DKHVVDLIVREAVDIIIMSS--VTGANSIREMRGMLEDHVDRVLIL--AK-------IETL--------LGMEYMDEIIM 301 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sf--V~sa~di~~~r~~l~~~~~~i~Ii--ak-------IEt~--------~av~nldeIl~ 301 (547)
+.+++..+++.|+|+|++.. ..+++.+.++.+.++. +.+.+- ++ +++. ..++.+.++..
T Consensus 85 ~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~~~~~g~--~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~ 162 (253)
T 1thf_D 85 DFETASELILRGADKVSINTAAVENPSLITQIAQTFGS--QAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEK 162 (253)
T ss_dssp SHHHHHHHHHTTCSEEEESHHHHHCTHHHHHHHHHHCG--GGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEChHHHhChHHHHHHHHHcCC--CcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHH
Confidence 45678888899999998864 2344445555544421 122111 11 2211 23444555555
Q ss_pred h-cCEEEEc---CCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEE
Q psy6272 302 E-SDGVVLN---RIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVV 377 (547)
Q Consensus 302 ~-~DgImIa---rgDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~v 377 (547)
. +|.|++. |+.-.....++.+.. + ++..+.|++....+- .. .|+..+...|+|++
T Consensus 163 ~G~~~i~~~~~~~~g~~~g~~~~~~~~----l---~~~~~ipvia~GGI~------~~--------~d~~~~~~~Gadgv 221 (253)
T 1thf_D 163 RGAGEILLTSIDRDGTKSGYDTEMIRF----V---RPLTTLPIIASGGAG------KM--------EHFLEAFLAGADAA 221 (253)
T ss_dssp TTCSEEEEEETTTTTSCSCCCHHHHHH----H---GGGCCSCEEEESCCC------SH--------HHHHHHHHTTCSEE
T ss_pred CCCCEEEEEeccCCCCCCCCCHHHHHH----H---HHhcCCCEEEECCCC------CH--------HHHHHHHHcCChHH
Confidence 5 6888874 221111112222222 2 234589999876632 13 67777777899999
Q ss_pred eeC
Q psy6272 378 VLT 380 (547)
Q Consensus 378 mLs 380 (547)
++.
T Consensus 222 ~vG 224 (253)
T 1thf_D 222 LAA 224 (253)
T ss_dssp EES
T ss_pred HHH
Confidence 997
No 97
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=83.26 E-value=7.3 Score=36.92 Aligned_cols=119 Identities=10% Similarity=0.068 Sum_probs=65.7
Q ss_pred HHHHHHHHcCCcEEEEccc--CChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEE---cCCcccccC
Q psy6272 243 HVVDLIVREAVDIIIMSSV--TGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVL---NRIQLAVAT 317 (547)
Q Consensus 243 ~di~~~~~~g~d~I~~sfV--~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImI---argDLg~e~ 317 (547)
..++.+.+.|+|+|.+..- .+ ++..++.+.+.+.|. .++.-+-+..-.+.+.++...+|.|++ .+|--|...
T Consensus 82 ~~v~~~~~~Gad~v~vh~~~~~~-~~~~~~~~~~~~~g~--~ig~~~~p~t~~e~~~~~~~~~d~vl~~~~~pg~~g~~~ 158 (230)
T 1rpx_A 82 QRVPDFIKAGADIVSVHCEQSST-IHLHRTINQIKSLGA--KAGVVLNPGTPLTAIEYVLDAVDLVLIMSVNPGFGGQSF 158 (230)
T ss_dssp HHHHHHHHTTCSEEEEECSTTTC-SCHHHHHHHHHHTTS--EEEEEECTTCCGGGGTTTTTTCSEEEEESSCTTCSSCCC
T ss_pred HHHHHHHHcCCCEEEEEecCccc-hhHHHHHHHHHHcCC--cEEEEeCCCCCHHHHHHHHhhCCEEEEEEEcCCCCCccc
Confidence 4678888999999988765 44 445555555655443 344334222223445555566887733 244334444
Q ss_pred ChHHHHHHHHHHHHHHHH--cCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 318 SVEVTFLAQKMIAARCNK--QGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 318 ~~e~v~~~qk~ii~~c~~--~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
....+..+ +++-+.+.+ .+.|+++...+ +| ..+..++..|+|++.++
T Consensus 159 ~~~~~~~i-~~l~~~~~~~~~~~pi~v~GGI--~~-------------~n~~~~~~aGad~vvvg 207 (230)
T 1rpx_A 159 IESQVKKI-SDLRKICAERGLNPWIEVDGGV--GP-------------KNAYKVIEAGANALVAG 207 (230)
T ss_dssp CTTHHHHH-HHHHHHHHHHTCCCEEEEESSC--CT-------------TTHHHHHHHTCCEEEES
T ss_pred cHHHHHHH-HHHHHHHHhcCCCceEEEECCC--CH-------------HHHHHHHHcCCCEEEEC
Confidence 43322222 223233322 26888776553 22 33444566699999998
No 98
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=82.82 E-value=20 Score=33.89 Aligned_cols=117 Identities=16% Similarity=0.156 Sum_probs=65.7
Q ss_pred hHHHHHHHHHcCCcEEEEcccCC--h--hhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEE---EEcC--C
Q psy6272 241 DKHVVDLIVREAVDIIIMSSVTG--A--NSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGV---VLNR--I 311 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sfV~s--a--~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgI---mIar--g 311 (547)
..+.++.+++.|+|+|.+..... + +.+.++.+.+.+...+..++..+.|.+-.... ...-+|.| +.+. +
T Consensus 90 ~~~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~~~v~~~~~t~~ea~~a--~~~Gad~i~~~v~g~~~~ 167 (234)
T 1yxy_A 90 TMTEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPNQLLMADISTFDEGLVA--HQAGIDFVGTTLSGYTPY 167 (234)
T ss_dssp SHHHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTTCEEEEECSSHHHHHHH--HHTTCSEEECTTTTSSTT
T ss_pred hHHHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCCCCeEEEeCCCHHHHHHH--HHcCCCEEeeeccccCCC
Confidence 46678899999999998865432 2 12333333333332356788877775543222 11226877 3332 2
Q ss_pred cccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 312 QLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 312 DLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
..+. .+ ..+..+. ++ +.. +.|++....+- | . .|+..+...|+|++++.
T Consensus 168 ~~~~-~~-~~~~~i~-~~---~~~-~ipvia~GGI~---s---~--------~~~~~~~~~Gad~v~vG 215 (234)
T 1yxy_A 168 SRQE-AG-PDVALIE-AL---CKA-GIAVIAEGKIH---S---P--------EEAKKINDLGVAGIVVG 215 (234)
T ss_dssp SCCS-SS-CCHHHHH-HH---HHT-TCCEEEESCCC---S---H--------HHHHHHHTTCCSEEEEC
T ss_pred CcCC-CC-CCHHHHH-HH---HhC-CCCEEEECCCC---C---H--------HHHHHHHHCCCCEEEEc
Confidence 2111 11 1222221 12 233 89999876631 1 2 67777888899999998
No 99
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=82.54 E-value=8.3 Score=36.74 Aligned_cols=110 Identities=14% Similarity=0.088 Sum_probs=67.6
Q ss_pred HHHHHHHHHcCCcEEEEc-----ccCC----hhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCC
Q psy6272 242 KHVVDLIVREAVDIIIMS-----SVTG----ANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRI 311 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s-----fV~s----a~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIarg 311 (547)
.++++.+.+.|+|+|.+= |+.+ .+.++++|+.. .....+-.++.+++ +.++..++. +|||.+--+
T Consensus 22 ~~~i~~~~~~Gad~i~l~i~Dg~fv~~~~~~~~~~~~lr~~~---~~~~~v~lmv~d~~--~~i~~~~~agad~v~vH~~ 96 (228)
T 1h1y_A 22 AAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHT---KAYLDCHLMVTNPS--DYVEPLAKAGASGFTFHIE 96 (228)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHHTTC---CSEEEEEEESSCGG--GGHHHHHHHTCSEEEEEGG
T ss_pred HHHHHHHHHcCCCEEEEEEecCCcCcchhhCHHHHHHHHhhc---CCcEEEEEEecCHH--HHHHHHHHcCCCEEEECCC
Confidence 456788889999998766 7665 45555555433 12233446776653 357777776 799977632
Q ss_pred cccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHh---CccEEee
Q psy6272 312 QLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQD---GADVVVL 379 (547)
Q Consensus 312 DLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~---g~D~vmL 379 (547)
.. + + .-.+.++.++++|+.++++.. ..|..|. ...+.. ++|.+++
T Consensus 97 ~~--~---~----~~~~~~~~i~~~g~~igv~~~---p~t~~e~-----------~~~~~~~~~~~d~vl~ 144 (228)
T 1h1y_A 97 VS--R---D----NWQELIQSIKAKGMRPGVSLR---PGTPVEE-----------VFPLVEAENPVELVLV 144 (228)
T ss_dssp GC--T---T----THHHHHHHHHHTTCEEEEEEC---TTSCGGG-----------GHHHHHSSSCCSEEEE
T ss_pred Cc--c---c----HHHHHHHHHHHcCCCEEEEEe---CCCCHHH-----------HHHHHhcCCCCCEEEE
Confidence 21 1 1 102456677889999998763 1232232 334556 9999988
No 100
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=82.19 E-value=12 Score=37.27 Aligned_cols=98 Identities=14% Similarity=0.130 Sum_probs=63.4
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhhH-HHHHHHHHhcCCCceEEEEe---cCHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANSI-REMRGMLEDHVDRVLILAKI---ETLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~di-~~~r~~l~~~~~~i~IiakI---Et~~av~nldeIl~~-~DgImIar 310 (547)
...+++.++.|+|+|++. +--|.++= +-++...+..+.++.+|+.+ -|.++++.....-+. +||+|+-+
T Consensus 26 ~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 105 (292)
T 3daq_A 26 KAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAKALGADAIMLIT 105 (292)
T ss_dssp HHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHHcCCCEEEECC
Confidence 445678899999999874 22233333 33344455556789999987 356666666555555 79999886
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-...- .+.+.+...-+.|.+++ +.|+++-
T Consensus 106 P~y~~-~~~~~l~~~f~~ia~a~---~lPiilY 134 (292)
T 3daq_A 106 PYYNK-TNQRGLVKHFEAIADAV---KLPVVLY 134 (292)
T ss_dssp CCSSC-CCHHHHHHHHHHHHHHH---CSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHHHHhC---CCCEEEE
Confidence 55432 24566666666665544 8999974
No 101
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=81.91 E-value=11 Score=36.30 Aligned_cols=105 Identities=11% Similarity=0.069 Sum_probs=69.3
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccccCChH
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAVATSVE 320 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~e~~~e 320 (547)
.+.++.+++.|++.|-+.+ ++....+.++.+..+. .++.+-+-. .---+.++.-+.+ +|++..+--|
T Consensus 41 ~~~~~al~~gGv~~iel~~-k~~~~~~~i~~l~~~~-~~~~igagt--vl~~d~~~~A~~aGAd~v~~p~~d-------- 108 (225)
T 1mxs_A 41 LPLADALAAGGIRTLEVTL-RSQHGLKAIQVLREQR-PELCVGAGT--VLDRSMFAAVEAAGAQFVVTPGIT-------- 108 (225)
T ss_dssp HHHHHHHHHTTCCEEEEES-SSTHHHHHHHHHHHHC-TTSEEEEEC--CCSHHHHHHHHHHTCSSEECSSCC--------
T ss_pred HHHHHHHHHCCCCEEEEec-CCccHHHHHHHHHHhC-cccEEeeCe--EeeHHHHHHHHHCCCCEEEeCCCC--------
Confidence 4567788999999999996 4555555555444433 355555542 2222444444444 7999866333
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 321 VTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 321 ~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
..+++.|+++|.|++..+. . . +++..|...|+|.+.+=
T Consensus 109 ------~~v~~~~~~~g~~~i~G~~---t-----~--------~e~~~A~~~Gad~vk~F 146 (225)
T 1mxs_A 109 ------EDILEAGVDSEIPLLPGIS---T-----P--------SEIMMGYALGYRRFKLF 146 (225)
T ss_dssp ------HHHHHHHHHCSSCEECEEC---S-----H--------HHHHHHHTTTCCEEEET
T ss_pred ------HHHHHHHHHhCCCEEEeeC---C-----H--------HHHHHHHHCCCCEEEEc
Confidence 2478889999999886432 2 2 55677899999999886
No 102
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=81.90 E-value=42 Score=34.73 Aligned_cols=141 Identities=9% Similarity=0.116 Sum_probs=89.6
Q ss_pred CCCChhhHHHHHH-HHHcCCcEEEE-cccCChhhHHHHHHHHHhcCCCceEEEEe-cCHHHHhhHHHHHhhc--C--EEE
Q psy6272 235 PVIADRDKHVVDL-IVREAVDIIIM-SSVTGANSIREMRGMLEDHVDRVLILAKI-ETLLGMEYMDEIIMES--D--GVV 307 (547)
Q Consensus 235 p~lt~~D~~di~~-~~~~g~d~I~~-sfV~sa~di~~~r~~l~~~~~~i~IiakI-Et~~av~nldeIl~~~--D--gIm 307 (547)
..++..|+..|.. ..+.|+|.|=+ +|+-++.|.+.++..... ..+..+.+-. =+...++..-+-+..+ | .++
T Consensus 29 ~~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~di~~a~~al~~ag~~~v~if 107 (370)
T 3rmj_A 29 AAMTKEEKIRVARQLEKLGVDIIEAGFAAASPGDFEAVNAIAKT-ITKSTVCSLSRAIERDIRQAGEAVAPAPKKRIHTF 107 (370)
T ss_dssp CCCCHHHHHHHHHHHHHHTCSEEEEEEGGGCHHHHHHHHHHHTT-CSSSEEEEEEESSHHHHHHHHHHHTTSSSEEEEEE
T ss_pred CCcCHHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHHHHh-CCCCeEEEEecCCHHHHHHHHHHHhhCCCCEEEEE
Confidence 4578888777654 55589999876 566778899999887653 3455544433 1444444322222222 3 567
Q ss_pred EcCCccc----ccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEeeCCc
Q psy6272 308 LNRIQLA----VATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVLTQS 382 (547)
Q Consensus 308 IargDLg----~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmLsk~ 382 (547)
++-.|+- +....+++...-..+++.|+.+|..|.+... +-+|.+. .+.-+++ .+...|+|.+.|.
T Consensus 108 ~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~e---d~~r~~~-----~~~~~~~~~~~~~Ga~~i~l~-- 177 (370)
T 3rmj_A 108 IATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCE---DALRSEI-----DFLAEICGAVIEAGATTINIP-- 177 (370)
T ss_dssp EECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEE---TGGGSCH-----HHHHHHHHHHHHHTCCEEEEE--
T ss_pred ecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecC---CCCccCH-----HHHHHHHHHHHHcCCCEEEec--
Confidence 7777763 3445677777777899999999999887654 3444443 1124444 4567899999996
Q ss_pred chHH
Q psy6272 383 EQAH 386 (547)
Q Consensus 383 Eta~ 386 (547)
+|.=
T Consensus 178 DT~G 181 (370)
T 3rmj_A 178 DTVG 181 (370)
T ss_dssp CSSS
T ss_pred CccC
Confidence 6654
No 103
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=81.66 E-value=7.9 Score=36.92 Aligned_cols=116 Identities=12% Similarity=0.200 Sum_probs=64.3
Q ss_pred hHHHHHHHHHcCCcEEEEcc--cCChhhHHHHHHHHHhcCCCceEEEE-----ecCH-------HHHhhHHHHHhh-cCE
Q psy6272 241 DKHVVDLIVREAVDIIIMSS--VTGANSIREMRGMLEDHVDRVLILAK-----IETL-------LGMEYMDEIIME-SDG 305 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sf--V~sa~di~~~r~~l~~~~~~i~Iiak-----IEt~-------~av~nldeIl~~-~Dg 305 (547)
+.++++.+++.|+|.|.+.. ..+++.+.++.+.+ +.++.+-.. +++. ..++.+.+..+. +|.
T Consensus 86 ~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~---g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G~~~ 162 (244)
T 1vzw_A 86 DDDTLAAALATGCTRVNLGTAALETPEWVAKVIAEH---GDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCAR 162 (244)
T ss_dssp SHHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHH---GGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTTCCC
T ss_pred CHHHHHHHHHcCCCEEEECchHhhCHHHHHHHHHHc---CCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCCCCE
Confidence 35568899999999998763 23333444444433 333322222 2322 334444555555 687
Q ss_pred EEEcCC--cc-cccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHh---CccEEee
Q psy6272 306 VVLNRI--QL-AVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQD---GADVVVL 379 (547)
Q Consensus 306 ImIarg--DL-g~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~---g~D~vmL 379 (547)
|++--. |. +....++.+.. + ++..++|++....+- .. .|+..+... |+|++++
T Consensus 163 i~~~~~~~~~~~~g~~~~~~~~----i---~~~~~ipvia~GGI~------~~--------~d~~~~~~~~~~Gadgv~v 221 (244)
T 1vzw_A 163 YVVTDIAKDGTLQGPNLELLKN----V---CAATDRPVVASGGVS------SL--------DDLRAIAGLVPAGVEGAIV 221 (244)
T ss_dssp EEEEEC-------CCCHHHHHH----H---HHTCSSCEEEESCCC------SH--------HHHHHHHTTGGGTEEEEEE
T ss_pred EEEeccCcccccCCCCHHHHHH----H---HHhcCCCEEEECCCC------CH--------HHHHHHHhhccCCCceeee
Confidence 776421 11 11122222222 2 244589999977642 23 777777777 9999999
Q ss_pred C
Q psy6272 380 T 380 (547)
Q Consensus 380 s 380 (547)
.
T Consensus 222 G 222 (244)
T 1vzw_A 222 G 222 (244)
T ss_dssp C
T ss_pred e
Confidence 7
No 104
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=81.62 E-value=23 Score=37.75 Aligned_cols=118 Identities=19% Similarity=0.262 Sum_probs=73.9
Q ss_pred HHHHHHHHHcCCcEEEEcccC--ChhhHHHHHHHHHhcCCCceEEE-EecCHHHHhhHHHHHhhcCEEEEcCCcccc---
Q psy6272 242 KHVVDLIVREAVDIIIMSSVT--GANSIREMRGMLEDHVDRVLILA-KIETLLGMEYMDEIIMESDGVVLNRIQLAV--- 315 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~--sa~di~~~r~~l~~~~~~i~Iia-kIEt~~av~nldeIl~~~DgImIargDLg~--- 315 (547)
.+.+.+.++.|+|.+.+.-.. +..-+..++. +.+.- .+.+++ .|-++++...+- -+|+|.+|.|-=+.
T Consensus 230 ~~~a~~l~~~gvd~lvvdta~G~~~~~L~~I~~-l~~~~-~vpvi~k~v~~~~~a~~l~----G~d~v~vg~g~g~~~~~ 303 (486)
T 2cu0_A 230 IKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKE-MRQKV-DADFIVGNIANPKAVDDLT----FADAVKVGIGPGSICTT 303 (486)
T ss_dssp HHHHHHHHHTTCSEEEEECSCCCCHHHHHHHHH-HHHTC-CSEEEEEEECCHHHHTTCT----TSSEEEECSSCSTTBCH
T ss_pred HHHHHHHHHhcCCceEEEecCCcEeehhhHHHH-HHHHh-CCccccCCcCCHHHHHHhh----CCCeEEEeeeeccceee
Confidence 566778889999988775321 2223333333 33222 566666 477888776664 78999995433111
Q ss_pred ----cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 316 ----ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 316 ----e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
..|.+.+ ..-..+-+.+++.+.|||.+..+- -- .|++.|+..|||++|+.
T Consensus 304 r~~~~~g~~~~-~~l~~~~~~~~~~~vpVia~GGi~------~~--------~di~kalalGA~~v~~g 357 (486)
T 2cu0_A 304 RIVAGVGVPQI-TAVAMVADRAQEYGLYVIADGGIR------YS--------GDIVKAIAAGADAVMLG 357 (486)
T ss_dssp HHHTCCCCCHH-HHHHHHHHHHHHHTCEEEEESCCC------SH--------HHHHHHHHTTCSEEEES
T ss_pred eEEeecCcchH-HHHHHHHHHHHHcCCcEEecCCCC------CH--------HHHHHHHHcCCCceeeC
Confidence 1122222 222234445566789999877643 23 89999999999999998
No 105
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=81.30 E-value=31 Score=31.69 Aligned_cols=106 Identities=14% Similarity=0.137 Sum_probs=60.4
Q ss_pred HHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCC-c-c----cccCC
Q psy6272 245 VDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRI-Q-L----AVATS 318 (547)
Q Consensus 245 i~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIarg-D-L----g~e~~ 318 (547)
++.+.+.|+|+|.++.-. .++..++++. ..+.+..-+.|.+.+... ...-+|.|++++. + - +...+
T Consensus 79 ~~~a~~~gad~v~l~~~~--~~~~~~~~~~----~~~~~~v~~~t~~e~~~~--~~~g~d~i~~~~~~~~~~~~~~~~~~ 150 (215)
T 1xi3_A 79 VDVALAVDADGVQLGPED--MPIEVAKEIA----PNLIIGASVYSLEEALEA--EKKGADYLGAGSVFPTKTKEDARVIG 150 (215)
T ss_dssp HHHHHHHTCSEEEECTTS--CCHHHHHHHC----TTSEEEEEESSHHHHHHH--HHHTCSEEEEECSSCC----CCCCCH
T ss_pred HHHHHHcCCCEEEECCcc--CCHHHHHHhC----CCCEEEEecCCHHHHHHH--HhcCCCEEEEcCCccCCCCCCCCCcC
Confidence 467788999999887432 2244455442 234444456666543322 1123799998541 1 0 12223
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 319 VEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 319 ~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
++.+..+ ++..++|++.+..+= . .++..+...|+|++.++
T Consensus 151 ~~~l~~l-------~~~~~~pvia~GGI~-------~--------~nv~~~~~~Ga~gv~vg 190 (215)
T 1xi3_A 151 LEGLRKI-------VESVKIPVVAIGGIN-------K--------DNAREVLKTGVDGIAVI 190 (215)
T ss_dssp HHHHHHH-------HHHCSSCEEEESSCC-------T--------TTHHHHHTTTCSEEEES
T ss_pred HHHHHHH-------HHhCCCCEEEECCcC-------H--------HHHHHHHHcCCCEEEEh
Confidence 3333222 233489999876631 2 55666777899999998
No 106
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=81.19 E-value=8.3 Score=37.83 Aligned_cols=119 Identities=13% Similarity=0.107 Sum_probs=69.5
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEE--cCCc-ccccCC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVL--NRIQ-LAVATS 318 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImI--argD-Lg~e~~ 318 (547)
...++.+.+.|+|++++|-.- .+++..+.+.+.+.|-+ ++.-+.-....+.+.+|.+.++|.+. ++-+ -|...+
T Consensus 112 ~~f~~~~~~aG~dgvii~dl~-~ee~~~~~~~~~~~gl~--~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~ 188 (262)
T 2ekc_A 112 EKFCRLSREKGIDGFIVPDLP-PEEAEELKAVMKKYVLS--FVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAREK 188 (262)
T ss_dssp HHHHHHHHHTTCCEEECTTCC-HHHHHHHHHHHHHTTCE--ECCEECTTCCHHHHHHHHHHCSSCEEEESSCC-------
T ss_pred HHHHHHHHHcCCCEEEECCCC-HHHHHHHHHHHHHcCCc--EEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCCCC
Confidence 455777889999999998553 46788888888776644 22233322445678888888865432 2111 122211
Q ss_pred hHHHHHHHHHHHHHHHHc-CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 319 VEVTFLAQKMIAARCNKQ-GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 319 ~e~v~~~qk~ii~~c~~~-gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.+ . .-....++..+++ +.|+.+...+ -| - .++.. +..|||+++..
T Consensus 189 ~~-~-~~~~~~v~~vr~~~~~pv~vG~GI---~t---~--------e~~~~-~~~gADgvIVG 234 (262)
T 2ekc_A 189 LP-Y-ERIKKKVEEYRELCDKPVVVGFGV---SK---K--------EHARE-IGSFADGVVVG 234 (262)
T ss_dssp ---C-HHHHHHHHHHHHHCCSCEEEESSC---CS---H--------HHHHH-HHTTSSEEEEC
T ss_pred cC-c-ccHHHHHHHHHhhcCCCEEEeCCC---CC---H--------HHHHH-HHcCCCEEEEC
Confidence 11 0 1112344444444 7899987663 11 2 45555 78899999997
No 107
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=81.03 E-value=9.5 Score=38.47 Aligned_cols=99 Identities=15% Similarity=0.109 Sum_probs=64.4
Q ss_pred HHHHHHHHHcCCcEEEEc-------ccCChhhHHHHHHHHHhcCCCceEEEEec---CHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS-------SVTGANSIREMRGMLEDHVDRVLILAKIE---TLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s-------fV~sa~di~~~r~~l~~~~~~i~IiakIE---t~~av~nldeIl~~-~DgImIar 310 (547)
...+++.++.|+|+|++. .....|-.+-++...+..+.++.||+.+= |.++++....--+. +||+|+-+
T Consensus 32 ~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 111 (309)
T 3fkr_A 32 KRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMP 111 (309)
T ss_dssp HHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcC
Confidence 345678889999999884 22233333444444555567899999863 56666655555544 69999987
Q ss_pred Cccc--ccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLA--VATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg--~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-... .-.+.+.+...-+.|. .+.+.|+++-
T Consensus 112 Pyy~~~~~~s~~~l~~~f~~va---~a~~lPiilY 143 (309)
T 3fkr_A 112 PYHGATFRVPEAQIFEFYARVS---DAIAIPIMVQ 143 (309)
T ss_dssp SCBTTTBCCCHHHHHHHHHHHH---HHCSSCEEEE
T ss_pred CCCccCCCCCHHHHHHHHHHHH---HhcCCCEEEE
Confidence 6553 3345667766666554 4568999874
No 108
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=81.02 E-value=30 Score=34.44 Aligned_cols=110 Identities=12% Similarity=0.061 Sum_probs=68.4
Q ss_pred HHHHHHHcCCcEEEEcc-cCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh----cCEEEEcCCcccc-cC
Q psy6272 244 VVDLIVREAVDIIIMSS-VTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME----SDGVVLNRIQLAV-AT 317 (547)
Q Consensus 244 di~~~~~~g~d~I~~sf-V~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~----~DgImIargDLg~-e~ 317 (547)
.+..+...|+|.|.+-- ..+.++++++.++..+.| +.+++.+-| .+|+..+ +|.|-+..-||.. +.
T Consensus 134 qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~lG--l~~lvevh~------~eEl~~A~~~ga~iIGinnr~l~t~~~ 205 (272)
T 3tsm_A 134 QVYEARSWGADCILIIMASVDDDLAKELEDTAFALG--MDALIEVHD------EAEMERALKLSSRLLGVNNRNLRSFEV 205 (272)
T ss_dssp HHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHHTT--CEEEEEECS------HHHHHHHTTSCCSEEEEECBCTTTCCB
T ss_pred HHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHHcC--CeEEEEeCC------HHHHHHHHhcCCCEEEECCCCCccCCC
Confidence 57788999999977653 335567777777776654 455555543 4444333 5888888656543 23
Q ss_pred ChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 318 SVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 318 ~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.++....+- ... ..++|++.-..+- | . .|+..+...|+|+++..
T Consensus 206 dl~~~~~L~----~~i-p~~~~vIaesGI~---t---~--------edv~~l~~~Ga~gvLVG 249 (272)
T 3tsm_A 206 NLAVSERLA----KMA-PSDRLLVGESGIF---T---H--------EDCLRLEKSGIGTFLIG 249 (272)
T ss_dssp CTHHHHHHH----HHS-CTTSEEEEESSCC---S---H--------HHHHHHHTTTCCEEEEC
T ss_pred ChHHHHHHH----HhC-CCCCcEEEECCCC---C---H--------HHHHHHHHcCCCEEEEc
Confidence 333332222 211 1378888765532 2 2 77888888999999996
No 109
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=80.92 E-value=6.6 Score=37.33 Aligned_cols=116 Identities=10% Similarity=0.184 Sum_probs=66.8
Q ss_pred hHHHHHHHHHcCCcEEEEcc--cCChhhHHHHHHHHHhcCCCce--EEEE-------ecCH-------HHHhhHHHHHhh
Q psy6272 241 DKHVVDLIVREAVDIIIMSS--VTGANSIREMRGMLEDHVDRVL--ILAK-------IETL-------LGMEYMDEIIME 302 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sf--V~sa~di~~~r~~l~~~~~~i~--Iiak-------IEt~-------~av~nldeIl~~ 302 (547)
+.++++.+++.|+|.|.+.. ..+++.+.++.+.++ ..+. +=++ +.+. ..++.++...+.
T Consensus 85 ~~~~~~~~l~~Gad~V~lg~~~l~~p~~~~~~~~~~g---~~~~~~ld~~~~~~~~~v~~~g~~~~~~~~~e~~~~~~~~ 161 (244)
T 2y88_A 85 DDESLAAALATGCARVNVGTAALENPQWCARVIGEHG---DQVAVGLDVQIIDGEHRLRGRGWETDGGDLWDVLERLDSE 161 (244)
T ss_dssp SHHHHHHHHHTTCSEEEECHHHHHCHHHHHHHHHHHG---GGEEEEEEEEEETTEEEEEEGGGTEEEEEHHHHHHHHHHT
T ss_pred CHHHHHHHHHcCCCEEEECchHhhChHHHHHHHHHcC---CCEEEEEeccccCCCCEEEECCccCCCCCHHHHHHHHHhC
Confidence 35568889999999998864 244444555555443 2221 1112 2222 224555555555
Q ss_pred -cCEEEEcCCccc---ccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHh---Ccc
Q psy6272 303 -SDGVVLNRIQLA---VATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQD---GAD 375 (547)
Q Consensus 303 -~DgImIargDLg---~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~---g~D 375 (547)
+|.|++-..+.. ....++.+.. + ++..++|++....+- .. .|+..+... |+|
T Consensus 162 G~~~i~~~~~~~~~~~~g~~~~~~~~----l---~~~~~ipvia~GGI~------~~--------~d~~~~~~~~~~Gad 220 (244)
T 2y88_A 162 GCSRFVVTDITKDGTLGGPNLDLLAG----V---ADRTDAPVIASGGVS------SL--------DDLRAIATLTHRGVE 220 (244)
T ss_dssp TCCCEEEEETTTTTTTSCCCHHHHHH----H---HTTCSSCEEEESCCC------SH--------HHHHHHHTTGGGTEE
T ss_pred CCCEEEEEecCCccccCCCCHHHHHH----H---HHhCCCCEEEECCCC------CH--------HHHHHHHhhccCCCC
Confidence 788887443332 1223232222 2 234589999877642 23 677777777 999
Q ss_pred EEeeC
Q psy6272 376 VVVLT 380 (547)
Q Consensus 376 ~vmLs 380 (547)
++|+.
T Consensus 221 ~v~vG 225 (244)
T 2y88_A 221 GAIVG 225 (244)
T ss_dssp EEEEC
T ss_pred EEEEc
Confidence 99997
No 110
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=80.59 E-value=18 Score=36.13 Aligned_cols=99 Identities=10% Similarity=0.085 Sum_probs=64.9
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhhHHHH-HHHHHhcCCCceEEEEecC---HHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANSIREM-RGMLEDHVDRVLILAKIET---LLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~di~~~-r~~l~~~~~~i~IiakIEt---~~av~nldeIl~~-~DgImIar 310 (547)
.+.+++.++.|+|+|++. +--|.++=.++ +...+..+.++.||+.+=+ .++++.....-+. +||+|+.+
T Consensus 27 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 106 (294)
T 3b4u_A 27 IAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALNAGARNILLAP 106 (294)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHhcCCCEEEEcC
Confidence 455678999999999873 33444444444 4445555668899998754 6677666655554 79999987
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHc---CCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQ---GKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~---gKPvi~a 343 (547)
-.+.-..+.+.+...-+.| |.+. +.|+++-
T Consensus 107 P~y~~~~s~~~l~~~f~~v---a~a~p~~~lPiilY 139 (294)
T 3b4u_A 107 PSYFKNVSDDGLFAWFSAV---FSKIGKDARDILVY 139 (294)
T ss_dssp CCSSCSCCHHHHHHHHHHH---HHHHCTTCCCEEEE
T ss_pred CcCCCCCCHHHHHHHHHHH---HHhcCCCCCcEEEE
Confidence 6553313556666666655 4455 7999874
No 111
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=80.36 E-value=19 Score=33.38 Aligned_cols=103 Identities=13% Similarity=0.171 Sum_probs=63.8
Q ss_pred HHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceE-EEEecCHHHHhhHHHHHhh-cCEEEEcCCcccccCChHH
Q psy6272 244 VVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLI-LAKIETLLGMEYMDEIIME-SDGVVLNRIQLAVATSVEV 321 (547)
Q Consensus 244 di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~I-iakIEt~~av~nldeIl~~-~DgImIargDLg~e~~~e~ 321 (547)
.++.+.+.|+++|-+- ..+++.++.++++....+.++.| ...+.+. +.++..++. +|+|.++--|
T Consensus 24 ~~~~~~~~G~~~i~l~-~~~~~~~~~i~~i~~~~~~~l~vg~g~~~~~---~~i~~a~~~Gad~V~~~~~~--------- 90 (212)
T 2v82_A 24 HVGAVIDAGFDAVEIP-LNSPQWEQSIPAIVDAYGDKALIGAGTVLKP---EQVDALARMGCQLIVTPNIH--------- 90 (212)
T ss_dssp HHHHHHHHTCCEEEEE-TTSTTHHHHHHHHHHHHTTTSEEEEECCCSH---HHHHHHHHTTCCEEECSSCC---------
T ss_pred HHHHHHHCCCCEEEEe-CCChhHHHHHHHHHHhCCCCeEEEeccccCH---HHHHHHHHcCCCEEEeCCCC---------
Confidence 3566778899999884 34566667776665544433332 1233343 356666655 7999744211
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 322 TFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 322 v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
..+++.|++.|.++++.+. | . .++..+...|+|.+.+.
T Consensus 91 -----~~~~~~~~~~g~~~~~g~~-----t---~--------~e~~~a~~~G~d~v~v~ 128 (212)
T 2v82_A 91 -----SEVIRRAVGYGMTVCPGCA-----T---A--------TEAFTALEAGAQALKIF 128 (212)
T ss_dssp -----HHHHHHHHHTTCEEECEEC-----S---H--------HHHHHHHHTTCSEEEET
T ss_pred -----HHHHHHHHHcCCCEEeecC-----C---H--------HHHHHHHHCCCCEEEEe
Confidence 2356778899998775422 2 2 44456788899999985
No 112
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=79.96 E-value=20 Score=38.78 Aligned_cols=99 Identities=18% Similarity=0.071 Sum_probs=57.6
Q ss_pred hhhHHHHHHHHHhcCCCceEEEE-ecCHHHHhhHHHHHhh-cCEEEEc-CCcccccCChHHHHHHHHHHHHHHHH----c
Q psy6272 264 ANSIREMRGMLEDHVDRVLILAK-IETLLGMEYMDEIIME-SDGVVLN-RIQLAVATSVEVTFLAQKMIAARCNK----Q 336 (547)
Q Consensus 264 a~di~~~r~~l~~~~~~i~Iiak-IEt~~av~nldeIl~~-~DgImIa-rgDLg~e~~~e~v~~~qk~ii~~c~~----~ 336 (547)
.++++.+|+.. ++.|+.| +-+ .+......+. +|+|.|+ .|--..+.+...+ .+..++.+.++. .
T Consensus 332 ~~~i~~lr~~~-----~~PvivKgv~~---~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~-~~l~~v~~~v~~~~~~~ 402 (511)
T 1kbi_A 332 WKDIEELKKKT-----KLPIVIKGVQR---TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPI-EVLAETMPILEQRNLKD 402 (511)
T ss_dssp HHHHHHHHHHC-----SSCEEEEEECS---HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHH-HHHHHHHHHHHTTTCBT
T ss_pred HHHHHHHHHHh-----CCcEEEEeCCC---HHHHHHHHHcCCCEEEEcCCCCccCCCCCchH-HHHHHHHHHHHhhccCC
Confidence 45666666543 4678888 333 2222222333 6999994 1111122222222 223345555542 2
Q ss_pred CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHH
Q psy6272 337 GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAH 386 (547)
Q Consensus 337 gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~ 386 (547)
.+|||....+- -- .|+..++..|||+||+. .....
T Consensus 403 ~ipVia~GGI~------~g--------~Dv~kaLalGAdaV~iG-r~~l~ 437 (511)
T 1kbi_A 403 KLEVFVDGGVR------RG--------TDVLKALCLGAKGVGLG-RPFLY 437 (511)
T ss_dssp TBEEEEESSCC------SH--------HHHHHHHHHTCSEEEEC-HHHHH
T ss_pred CcEEEEECCCC------CH--------HHHHHHHHcCCCEEEEC-HHHHH
Confidence 68999987743 24 89999999999999998 65443
No 113
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=79.74 E-value=29 Score=31.88 Aligned_cols=100 Identities=13% Similarity=0.166 Sum_probs=62.2
Q ss_pred HHHHHHcCCcEEEEcccC-Ch-hhHHHHHHHHHhcCCCceEEE-EecCHHHHhhHHHHHhh-cCEEEEcCCcccccCChH
Q psy6272 245 VDLIVREAVDIIIMSSVT-GA-NSIREMRGMLEDHVDRVLILA-KIETLLGMEYMDEIIME-SDGVVLNRIQLAVATSVE 320 (547)
Q Consensus 245 i~~~~~~g~d~I~~sfV~-sa-~di~~~r~~l~~~~~~i~Iia-kIEt~~av~nldeIl~~-~DgImIargDLg~e~~~e 320 (547)
++...+.|+++|-+.+=. .+ +.++++|+... .+..|-+ .+.|.+- .++..+. +|.| ++++--
T Consensus 28 ~~~~~~~G~~~iev~~~~~~~~~~i~~ir~~~~---~~~~ig~~~v~~~~~---~~~a~~~Gad~i-v~~~~~------- 93 (205)
T 1wa3_A 28 ALAVFEGGVHLIEITFTVPDADTVIKELSFLKE---KGAIIGAGTVTSVEQ---CRKAVESGAEFI-VSPHLD------- 93 (205)
T ss_dssp HHHHHHTTCCEEEEETTSTTHHHHHHHTHHHHH---TTCEEEEESCCSHHH---HHHHHHHTCSEE-ECSSCC-------
T ss_pred HHHHHHCCCCEEEEeCCChhHHHHHHHHHHHCC---CCcEEEecccCCHHH---HHHHHHcCCCEE-EcCCCC-------
Confidence 445667899999775422 11 23566666553 2333333 3445443 3333333 7999 787621
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 321 VTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 321 ~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
..+++.|+++|+|++... .| . +++..+...|+|.+-+.
T Consensus 94 ------~~~~~~~~~~g~~vi~g~-----~t---~--------~e~~~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 94 ------EEISQFCKEKGVFYMPGV-----MT---P--------TELVKAMKLGHTILKLF 131 (205)
T ss_dssp ------HHHHHHHHHHTCEEECEE-----CS---H--------HHHHHHHHTTCCEEEET
T ss_pred ------HHHHHHHHHcCCcEECCc-----CC---H--------HHHHHHHHcCCCEEEEc
Confidence 357888999999998631 12 2 66678899999999887
No 114
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=79.66 E-value=9.6 Score=39.92 Aligned_cols=112 Identities=13% Similarity=0.239 Sum_probs=79.9
Q ss_pred HHHHHHHHHcCCcEEEEcccC-----------ChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVT-----------GANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~-----------sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIar 310 (547)
++.++.+.+.|+|+|.+.--. ..+.++.++++..+. .+.+++-+-..+.++-+.+ .+|.+-||-
T Consensus 159 ~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~--Gl~~~te~~d~~~~~~l~~---~vd~lkIgs 233 (385)
T 3nvt_A 159 AAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY--GLGVISEIVTPADIEVALD---YVDVIQIGA 233 (385)
T ss_dssp HHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCSGGGHHHHTT---TCSEEEECG
T ss_pred HHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc--CCEEEEecCCHHHHHHHHh---hCCEEEECc
Confidence 555677888999998665311 246777777777654 5788998888888776654 589999998
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHh-CccEEee
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQD-GADVVVL 379 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~-g~D~vmL 379 (547)
+++.- ..++..+-+.||||++.|.|. .|-.|+ ..++..+.. |.+-++|
T Consensus 234 ~~~~n-----------~~LL~~~a~~gkPVilk~G~~--~t~~e~--------~~Ave~i~~~Gn~~i~L 282 (385)
T 3nvt_A 234 RNMQN-----------FELLKAAGRVDKPILLKRGLS--ATIEEF--------IGAAEYIMSQGNGKIIL 282 (385)
T ss_dssp GGTTC-----------HHHHHHHHTSSSCEEEECCTT--CCHHHH--------HHHHHHHHTTTCCCEEE
T ss_pred ccccC-----------HHHHHHHHccCCcEEEecCCC--CCHHHH--------HHHHHHHHHcCCCeEEE
Confidence 88763 135666778999999999962 555566 777776654 6644544
No 115
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=79.54 E-value=30 Score=35.48 Aligned_cols=148 Identities=10% Similarity=0.076 Sum_probs=79.0
Q ss_pred hhhHHHHH-HHHHcCCc-EEEEccc-----------CChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh--c
Q psy6272 239 DRDKHVVD-LIVREAVD-IIIMSSV-----------TGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME--S 303 (547)
Q Consensus 239 ~~D~~di~-~~~~~g~d-~I~~sfV-----------~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~--~ 303 (547)
..|..... ..-+.|+| +|-+.+= ++++.+.++-+.+.+. -++.|++||=--.....+.++++. +
T Consensus 140 ~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~-~~~PV~vKi~p~~~~~~~a~~~~~aga 218 (345)
T 3oix_A 140 PEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTY-FTKPLGIKLPPYFDIVHFDQAAAIFNX 218 (345)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEECCCCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHH-hCCCeEEEECCCCCHHHHHHHHHHhCC
Confidence 44444433 33346777 8777642 2334444444444332 357899999643233344444443 3
Q ss_pred CEE-E------------EcCCccc----ccC----ChHHHHHHHHHHHHHHHHc--CCcEEEEcCCCCCCCcccccccCc
Q psy6272 304 DGV-V------------LNRIQLA----VAT----SVEVTFLAQKMIAARCNKQ--GKPFLVVGDILPDHNVEEYSDVSI 360 (547)
Q Consensus 304 DgI-m------------IargDLg----~e~----~~e~v~~~qk~ii~~c~~~--gKPvi~aTq~Le~PtraE~~~~~~ 360 (547)
|+| + |.+.-.. .+. |....+.+.+.+-...++. ..|+|....+- ..
T Consensus 219 ~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~~ipIIg~GGI~------s~----- 287 (345)
T 3oix_A 219 YPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNPSIQIIGTGGVX------TG----- 287 (345)
T ss_dssp SCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCTTSEEEEESSCC------SH-----
T ss_pred CceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCCCCcEEEECCCC------Ch-----
Confidence 443 1 2211110 011 1233344444343334444 58999877643 24
Q ss_pred cchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHhhhh
Q psy6272 361 GDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESV 402 (547)
Q Consensus 361 ~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~aE~~ 402 (547)
.|+..++..|||+||+. ..-+..-..++.+|.+..+..
T Consensus 288 ---~da~~~l~aGAd~V~ig-ra~~~~gP~~~~~i~~~L~~~ 325 (345)
T 3oix_A 288 ---RDAFEHILCGASMVQIG-TALHQEGPQIFKRITKELXAI 325 (345)
T ss_dssp ---HHHHHHHHHTCSEEEES-HHHHHHCTHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHhCCCEEEEC-hHHHhcChHHHHHHHHHHHHH
Confidence 88889999999999998 433344445666666666654
No 116
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=79.22 E-value=14 Score=36.48 Aligned_cols=109 Identities=11% Similarity=0.175 Sum_probs=77.0
Q ss_pred hhHHHHHHHHHcCCcEEEEcccC--C---------hhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEE
Q psy6272 240 RDKHVVDLIVREAVDIIIMSSVT--G---------ANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVL 308 (547)
Q Consensus 240 ~D~~di~~~~~~g~d~I~~sfV~--s---------a~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImI 308 (547)
.-++.++.+.+.|+|+|....-. + .+.++.++++..+. .+.+++-+-....++-+.+. .|.+-|
T Consensus 38 ~a~~~a~~l~~~Ga~~vk~~~fkprts~~~~~g~~~egl~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~~---vd~~kI 112 (262)
T 1zco_A 38 QIMKVAEFLAEVGIKVLRGGAFKPRTSPYSFQGYGEKALRWMREAADEY--GLVTVTEVMDTRHVELVAKY---SDILQI 112 (262)
T ss_dssp HHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCCGGGHHHHHHH---CSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEEecccCCCcccccCccHHHHHHHHHHHHHc--CCcEEEeeCCHHhHHHHHhh---CCEEEE
Confidence 34666778889999998876432 1 67888888888664 58899999888887777664 799999
Q ss_pred cCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHH-hCc
Q psy6272 309 NRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQ-DGA 374 (547)
Q Consensus 309 argDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~-~g~ 374 (547)
|-+++.- .+ +++.+-+.||||++.|.| .+|-.|+ -+.+..+. .|.
T Consensus 113 ga~~~~n------~~-----ll~~~a~~~kPV~lk~G~--~~t~~e~--------~~Av~~i~~~Gn 158 (262)
T 1zco_A 113 GARNSQN------FE-----LLKEVGKVENPVLLKRGM--GNTIQEL--------LYSAEYIMAQGN 158 (262)
T ss_dssp CGGGTTC------HH-----HHHHHTTSSSCEEEECCT--TCCHHHH--------HHHHHHHHTTTC
T ss_pred CcccccC------HH-----HHHHHHhcCCcEEEecCC--CCCHHHH--------HHHHHHHHHCCC
Confidence 9887762 11 233344589999999886 3455565 55555544 344
No 117
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=79.17 E-value=10 Score=37.66 Aligned_cols=118 Identities=14% Similarity=0.107 Sum_probs=68.6
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCC-ceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccccCChH
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDR-VLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVE 320 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~-i~IiakIEt~~av~nldeIl~~~DgImIargDLg~e~~~e 320 (547)
...++.+.+.|+|+++++=+-. +++.++.+.+.+.|-. +.+++- ....+.+++|.+.+.|++..-.=.|+ .|..
T Consensus 109 ~~f~~~~~~aG~dGviv~Dl~~-ee~~~~~~~~~~~gl~~i~liap---~s~~eri~~ia~~~~gfiy~vs~~G~-TG~~ 183 (271)
T 1ujp_A 109 ERFFGLFKQAGATGVILPDLPP-DEDPGLVRLAQEIGLETVFLLAP---TSTDARIATVVRHATGFVYAVSVTGV-TGMR 183 (271)
T ss_dssp HHHHHHHHHHTCCEEECTTCCG-GGCHHHHHHHHHHTCEEECEECT---TCCHHHHHHHHTTCCSCEEEECC--------
T ss_pred HHHHHHHHHcCCCEEEecCCCH-HHHHHHHHHHHHcCCceEEEeCC---CCCHHHHHHHHHhCCCCEEEEecCcc-cCCC
Confidence 3446778889999999986654 6777888888776633 333332 23456888899887665432111111 1221
Q ss_pred -HHHHHHHHHHHHHHHc-CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 321 -VTFLAQKMIAARCNKQ-GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 321 -~v~~~qk~ii~~c~~~-gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.+..-....++..+++ +.|+++...+ -|. .++..+ .|+|+++..
T Consensus 184 ~~~~~~~~~~v~~vr~~~~~Pv~vGfGI---~t~-----------e~a~~~--~~ADgVIVG 229 (271)
T 1ujp_A 184 ERLPEEVKDLVRRIKARTALPVAVGFGV---SGK-----------ATAAQA--AVADGVVVG 229 (271)
T ss_dssp -----CCHHHHHHHHTTCCSCEEEESCC---CSH-----------HHHHHH--TTSSEEEEC
T ss_pred CCCCccHHHHHHHHHhhcCCCEEEEcCC---CCH-----------HHHHHh--cCCCEEEEC
Confidence 1111112344555554 7899998763 222 445554 899999997
No 118
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=79.13 E-value=27 Score=35.93 Aligned_cols=120 Identities=10% Similarity=0.075 Sum_probs=68.6
Q ss_pred CCChhhHHHH--------HHHHHcCCcEEEEc-------------ccCChhh----------------HHHHHHHHHhcC
Q psy6272 236 VIADRDKHVV--------DLIVREAVDIIIMS-------------SVTGANS----------------IREMRGMLEDHV 278 (547)
Q Consensus 236 ~lt~~D~~di--------~~~~~~g~d~I~~s-------------fV~sa~d----------------i~~~r~~l~~~~ 278 (547)
.||..|++.+ +.+.+.|+|+|=+. ..+...| ++.+|+.+ +
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~v---g 226 (365)
T 2gou_A 150 AMTKADIAQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLENRLRFLDEVVAALVDAI---G 226 (365)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHHHTHHHHHHHHHHHHHH---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhhhHHHHHHHHHHHHHHc---C
Confidence 5777776655 35678999999983 3332222 44445444 3
Q ss_pred CCceEEEEecCH---------HHHhhHHHHHhh-----cCEEEEcCCcccccCChHHHHHHHHHHHH-HHHHcCCcEEEE
Q psy6272 279 DRVLILAKIETL---------LGMEYMDEIIME-----SDGVVLNRIQLAVATSVEVTFLAQKMIAA-RCNKQGKPFLVV 343 (547)
Q Consensus 279 ~~i~IiakIEt~---------~av~nldeIl~~-----~DgImIargDLg~e~~~e~v~~~qk~ii~-~c~~~gKPvi~a 343 (547)
.+ .|..||-.. ..++...++++. +|+|-+..+...-.-+.+ + ..++ ..+..++|||..
T Consensus 227 ~~-pv~vris~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~-~-----~~~~~i~~~~~iPvi~~ 299 (365)
T 2gou_A 227 AE-RVGVRLAPLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTP-V-----SFKRALREAYQGVLIYA 299 (365)
T ss_dssp GG-GEEEEECSSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCC-H-----HHHHHHHHHCCSEEEEE
T ss_pred CC-cEEEEEccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCcc-H-----HHHHHHHHHCCCcEEEe
Confidence 34 677787431 123333333333 588888765432111111 1 1222 234468999987
Q ss_pred cCCCCCCCcccccccCccchhhHHHHHHhC-ccEEeeC
Q psy6272 344 GDILPDHNVEEYSDVSIGDMNDVNSIVQDG-ADVVVLT 380 (547)
Q Consensus 344 Tq~Le~PtraE~~~~~~~~~~Dv~nav~~g-~D~vmLs 380 (547)
..+ + . .|+..++..| +|+|++.
T Consensus 300 Ggi----~---~--------~~a~~~l~~g~aD~V~ig 322 (365)
T 2gou_A 300 GRY----N---A--------EKAEQAINDGLADMIGFG 322 (365)
T ss_dssp SSC----C---H--------HHHHHHHHTTSCSEEECC
T ss_pred CCC----C---H--------HHHHHHHHCCCcceehhc
Confidence 663 2 2 5566788888 9999998
No 119
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=78.98 E-value=13 Score=37.56 Aligned_cols=98 Identities=14% Similarity=0.200 Sum_probs=63.4
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhhHHH-HHHHHHhcCCCceEEEEec---CHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANSIRE-MRGMLEDHVDRVLILAKIE---TLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~di~~-~r~~l~~~~~~i~IiakIE---t~~av~nldeIl~~-~DgImIar 310 (547)
...+++.++.|+|+|++. +--|.++=++ ++...+..+.++.||+.+= |.++++.....-+. +||+|+-+
T Consensus 47 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~ 126 (314)
T 3qze_A 47 AKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSGGADACLLVT 126 (314)
T ss_dssp HHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 345678889999999874 2223334333 3444555567899999874 46677666665555 79998886
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-... -...+.+...-+.|. .+.+.|+++-
T Consensus 127 P~y~-~~s~~~l~~~f~~va---~a~~lPiilY 155 (314)
T 3qze_A 127 PYYN-KPTQEGMYQHFRHIA---EAVAIPQILY 155 (314)
T ss_dssp CCSS-CCCHHHHHHHHHHHH---HHSCSCEEEE
T ss_pred CCCC-CCCHHHHHHHHHHHH---HhcCCCEEEE
Confidence 5443 224456666656554 4559999975
No 120
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=78.46 E-value=11 Score=37.99 Aligned_cols=120 Identities=12% Similarity=0.012 Sum_probs=76.1
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcc-hHHHHHHHHHHHHHHhhhhhhhH
Q psy6272 328 MIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSE-QAHHRVDILKEILKKTESVLWEK 406 (547)
Q Consensus 328 ~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~E-ta~eaV~~m~~I~~~aE~~~~~~ 406 (547)
.+...|++.|.|+.+. .|..... .-+...-..|++.+... ++ +..++++...++.++-...++-.
T Consensus 87 alA~aa~~~G~~~~iv-----~p~~~~~--------~k~~~~~~~GA~V~~~~-~~~~~~~~~~~a~~l~~~~~~~~~~~ 152 (325)
T 3dwg_A 87 SLAMAARLKGYRLICV-----MPENTSV--------ERRQLLELYGAQIIFSA-AEGGSNTAVATAKELAATNPSWVMLY 152 (325)
T ss_dssp HHHHHHHHHTCEEEEE-----EESSSCH--------HHHHHHHHHTCEEEEEC-STTTHHHHHHHHHHHHHHCTTSBCCC
T ss_pred HHHHHHHHcCCcEEEE-----ECCCCCH--------HHHHHHHHCCCEEEEEC-CCCCHHHHHHHHHHHHHhCCCeEeCC
Confidence 3667889999998875 3443333 44455566799999988 54 34577776666654433221111
Q ss_pred HHHHHhhhcCCCCCChhh---HHHHHHHHHHHhcC-CcEEEEEcCCchHHHHHHh----cCCCCCEEEEeCchh
Q psy6272 407 QVFEDLCALACPPLDPAH---SIVIACVNAALKCQ-AVAIIVITCSGYSAKLVSK----YRPQCPILAVSSLGY 472 (547)
Q Consensus 407 ~~f~~~~~~~~~~~~~~~---~ia~aav~~a~~~~-a~aIvv~T~sG~tA~~isk----~RP~~pIiavt~~~~ 472 (547)
+..++.. -....+.|+..+++ .++||+.+-+|.+..-+++ ..|.+.|++|.+...
T Consensus 153 -----------~~~np~~~~~g~~t~~~Ei~~q~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~ 215 (325)
T 3dwg_A 153 -----------QYGNPANTDSHYCGTGPELLADLPEITHFVAGLGTTGTLMGTGRFLREHVANVKIVAAEPRYG 215 (325)
T ss_dssp -----------TTTCHHHHHHHHHTHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHSTTCEEEEEEEECC
T ss_pred -----------CCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEecCchHHHHHHHHHHHHhCCCCEEEEEeeCCC
Confidence 1112111 12334556766663 8999999999998776655 489999999988643
No 121
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=78.43 E-value=15 Score=36.97 Aligned_cols=99 Identities=8% Similarity=0.015 Sum_probs=63.4
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhhH-HHHHHHHHhcCCCceEEEEe---cCHHHHhhHHHHHhh-cCEEEEc-
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANSI-REMRGMLEDHVDRVLILAKI---ETLLGMEYMDEIIME-SDGVVLN- 309 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~di-~~~r~~l~~~~~~i~IiakI---Et~~av~nldeIl~~-~DgImIa- 309 (547)
...+++.++.|+|+|++. +--|.++= +-++...+..+.++.||+-+ -|.++++.....-+. +|++|+-
T Consensus 38 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 117 (307)
T 3s5o_A 38 EENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVT 117 (307)
T ss_dssp HHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 345678889999999864 22333343 44444455566789999987 445666655555544 6999985
Q ss_pred CCcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 310 RIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 310 rgDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
|.........+.+...-+.| |.+.+.|+++-
T Consensus 118 P~y~~~~~s~~~l~~~f~~i---a~a~~lPiilY 148 (307)
T 3s5o_A 118 PCYYRGRMSSAALIHHYTKV---ADLSPIPVVLY 148 (307)
T ss_dssp CCTTGGGCCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCcCCCCCCHHHHHHHHHHH---HhhcCCCEEEE
Confidence 44443334566676666666 44568999875
No 122
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=78.28 E-value=16 Score=36.56 Aligned_cols=136 Identities=16% Similarity=0.103 Sum_probs=77.1
Q ss_pred CCChhhHHHH-HHHHHcCCcEEEEcc-cCC-----hhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEE
Q psy6272 236 VIADRDKHVV-DLIVREAVDIIIMSS-VTG-----ANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVV 307 (547)
Q Consensus 236 ~lt~~D~~di-~~~~~~g~d~I~~sf-V~s-----a~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgIm 307 (547)
.++..++..| +.+.+.|++.|-+.| +.. ..|..++...+.+. .++.+.+.+.+.+.+ +.-++. .|.|+
T Consensus 26 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~-~~~~~~~l~~~~~~i---~~a~~aG~~~v~ 101 (302)
T 2ftp_A 26 PIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQR-PGVTYAALAPNLKGF---EAALESGVKEVA 101 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-TTSEEEEECCSHHHH---HHHHHTTCCEEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhc-CCCEEEEEeCCHHHH---HHHHhCCcCEEE
Confidence 4566666665 556669999998864 322 14555554444432 456666666444333 333333 58777
Q ss_pred E-c-CCcc----cccCChHHHHHHHHHHHHHHHHcCCcEEEE-cCCC--CCCCcccccccCccchhhHH-HHHHhCccEE
Q psy6272 308 L-N-RIQL----AVATSVEVTFLAQKMIAARCNKQGKPFLVV-GDIL--PDHNVEEYSDVSIGDMNDVN-SIVQDGADVV 377 (547)
Q Consensus 308 I-a-rgDL----g~e~~~e~v~~~qk~ii~~c~~~gKPvi~a-Tq~L--e~PtraE~~~~~~~~~~Dv~-nav~~g~D~v 377 (547)
| . -.|+ -+.++.++....-+++++.|+++|+.|-.. ..++ |+-+|.+. .+.-+++ .+...|+|.+
T Consensus 102 i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~-----~~~~~~~~~~~~~G~d~i 176 (302)
T 2ftp_A 102 VFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDP-----RQVAWVARELQQMGCYEV 176 (302)
T ss_dssp EEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCH-----HHHHHHHHHHHHTTCSEE
T ss_pred EEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCH-----HHHHHHHHHHHHcCCCEE
Confidence 6 2 2242 233577888888888999999999998421 0111 11122222 1113433 2346899999
Q ss_pred eeC
Q psy6272 378 VLT 380 (547)
Q Consensus 378 mLs 380 (547)
.|.
T Consensus 177 ~l~ 179 (302)
T 2ftp_A 177 SLG 179 (302)
T ss_dssp EEE
T ss_pred EEe
Confidence 996
No 123
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=77.55 E-value=23 Score=36.08 Aligned_cols=129 Identities=12% Similarity=0.129 Sum_probs=68.7
Q ss_pred CCChhhHHHH--------HHHHHcCCcEEEEccc-------------CChh---------hH---HHHHHHH-HhcCCCc
Q psy6272 236 VIADRDKHVV--------DLIVREAVDIIIMSSV-------------TGAN---------SI---REMRGML-EDHVDRV 281 (547)
Q Consensus 236 ~lt~~D~~di--------~~~~~~g~d~I~~sfV-------------~sa~---------di---~~~r~~l-~~~~~~i 281 (547)
.||..|++.+ +.+.+.|+|+|=+-.- +... .. .++.+.+ +..+.+.
T Consensus 141 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~ 220 (349)
T 3hgj_A 141 PLDEAGMERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPREL 220 (349)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCc
Confidence 5788887776 4678899999877433 2211 12 2222222 2335677
Q ss_pred eEEEEecCH----------HHHhhHHHHHhh-cCEEEEcCCccccc--CChHHHHHHHHHHHHHHH-HcCCcEEEEcCCC
Q psy6272 282 LILAKIETL----------LGMEYMDEIIME-SDGVVLNRIQLAVA--TSVEVTFLAQKMIAARCN-KQGKPFLVVGDIL 347 (547)
Q Consensus 282 ~IiakIEt~----------~av~nldeIl~~-~DgImIargDLg~e--~~~e~v~~~qk~ii~~c~-~~gKPvi~aTq~L 347 (547)
.|..||--. ++++-+..+.+. .|.|-+.-|...-. ++... ..+-..++..+ ..++||+....+-
T Consensus 221 pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~--~~~~~~~~~ir~~~~iPVi~~Ggi~ 298 (349)
T 3hgj_A 221 PLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAP--GFQVPFADAVRKRVGLRTGAVGLIT 298 (349)
T ss_dssp CEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCT--TTTHHHHHHHHHHHCCEEEECSSCC
T ss_pred eEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCc--cccHHHHHHHHHHcCceEEEECCCC
Confidence 788888531 222222222222 58888764433221 11000 01111222222 3489998865432
Q ss_pred CCCCcccccccCccchhhHHHHHHhC-ccEEeeC
Q psy6272 348 PDHNVEEYSDVSIGDMNDVNSIVQDG-ADVVVLT 380 (547)
Q Consensus 348 e~PtraE~~~~~~~~~~Dv~nav~~g-~D~vmLs 380 (547)
| . .|+..++..| +|.|++.
T Consensus 299 ---t---~--------e~a~~~l~~G~aD~V~iG 318 (349)
T 3hgj_A 299 ---T---P--------EQAETLLQAGSADLVLLG 318 (349)
T ss_dssp ---C---H--------HHHHHHHHTTSCSEEEES
T ss_pred ---C---H--------HHHHHHHHCCCceEEEec
Confidence 1 2 5566788888 9999998
No 124
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=77.28 E-value=12 Score=37.65 Aligned_cols=98 Identities=15% Similarity=0.193 Sum_probs=61.7
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhhHH-HHHHHHHhcCCCceEEEEe---cCHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANSIR-EMRGMLEDHVDRVLILAKI---ETLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~di~-~~r~~l~~~~~~i~IiakI---Et~~av~nldeIl~~-~DgImIar 310 (547)
.+.+++.++.|+|+|++. +--|.++=. -++...+..+.++.+|+.+ -|.++++.....-+. +||+|+.+
T Consensus 39 ~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 39 ARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 345678899999998874 222333333 3344455556789999987 345666655555544 69999886
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-...- .+.+.+...-+.| |.+.+.|+++-
T Consensus 119 P~y~~-~s~~~l~~~f~~v---a~a~~lPiilY 147 (304)
T 3l21_A 119 PYYSK-PPQRGLQAHFTAV---ADATELPMLLY 147 (304)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HTSCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 54432 2445555555545 44558999975
No 125
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=77.26 E-value=12 Score=37.90 Aligned_cols=119 Identities=12% Similarity=0.042 Sum_probs=75.5
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcch-HHHHHHHHHHHHHHhhhhhhhHH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQ-AHHRVDILKEILKKTESVLWEKQ 407 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Et-a~eaV~~m~~I~~~aE~~~~~~~ 407 (547)
+...|+..|.|+.+. .|..... ..+...-..|++.+... ++. ..++++...++.++-+..++-
T Consensus 87 lA~aa~~~G~~~~iv-----~p~~~~~--------~k~~~~~~~GA~V~~~~-~~~~~~~~~~~a~~~~~~~~~~~~i-- 150 (334)
T 3tbh_A 87 LAHLGAIRGYKVIIT-----MPESMSL--------ERRCLLRIFGAEVILTP-AALGMKGAVAMAKKIVAANPNAVLA-- 150 (334)
T ss_dssp HHHHHHHHTCEEEEE-----EETTSCH--------HHHHHHHHTTCEEEEEC-GGGHHHHHHHHHHHHHHHCTTEEEC--
T ss_pred HHHHHHHhCCCEEEE-----ECCCCCH--------HHHHHHHHCCCEEEEEC-CCCCchHHHHHHHHHHHhCCCEEEC--
Confidence 667899999998875 4443333 44555667899999998 543 336666665555443221111
Q ss_pred HHHHhhhcCCCCCChhhH---HHHHHHHHHHhc--CCcEEEEEcCCchHHHHHHh----cCCCCCEEEEeCchh
Q psy6272 408 VFEDLCALACPPLDPAHS---IVIACVNAALKC--QAVAIIVITCSGYSAKLVSK----YRPQCPILAVSSLGY 472 (547)
Q Consensus 408 ~f~~~~~~~~~~~~~~~~---ia~aav~~a~~~--~a~aIvv~T~sG~tA~~isk----~RP~~pIiavt~~~~ 472 (547)
.+..++... -...+.|+..++ ..++||+.+-+|.+..-+++ .+|.+.|++|.+...
T Consensus 151 ---------~~~~np~n~~~g~~t~~~Ei~~q~~~~~d~vv~pvG~GG~~aGi~~~~k~~~p~~~vigVe~~~~ 215 (334)
T 3tbh_A 151 ---------DQFATKYNALIHEETTGPEIWEQTNHNVDCFIAGVGTGGTLTGVARALKKMGSHARIVAVEPTES 215 (334)
T ss_dssp ---------CTTTCHHHHHHHHHTHHHHHHHHTTSCCSEEEEECSSSHHHHHHHHHHHHTTCCCEEEEEEETTS
T ss_pred ---------CccCChhHHHHHHHHHHHHHHHHhCCCCCEEEeccCCcHhHHHHHHHHHHhCCCCEEEEEeeCCc
Confidence 111122211 123456777776 47999999999998776554 489999999987543
No 126
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=77.25 E-value=10 Score=37.24 Aligned_cols=118 Identities=13% Similarity=0.075 Sum_probs=70.8
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEE-E-cCCcc-cccCC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVV-L-NRIQL-AVATS 318 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgIm-I-argDL-g~e~~ 318 (547)
...++.+.+.|+|+|+++-.-. +++..+.+.+.+.|-+. +.-+.-....+.+.+|++.++|.+ + +.-.. |...+
T Consensus 112 ~~~~~~~~~aGadgii~~d~~~-e~~~~~~~~~~~~g~~~--i~l~~p~t~~~~i~~i~~~~~g~v~~~s~~G~tG~~~~ 188 (268)
T 1qop_A 112 DAFYARCEQVGVDSVLVADVPV-EESAPFRQAALRHNIAP--IFICPPNADDDLLRQVASYGRGYTYLLSRSGVTGAENR 188 (268)
T ss_dssp HHHHHHHHHHTCCEEEETTCCG-GGCHHHHHHHHHTTCEE--ECEECTTCCHHHHHHHHHHCCSCEEEESSSSCCCSSSC
T ss_pred HHHHHHHHHcCCCEEEEcCCCH-HHHHHHHHHHHHcCCcE--EEEECCCCCHHHHHHHHhhCCCcEEEEecCCcCCCccC
Confidence 4567788899999999986654 67888888888766432 222222234567888888887543 2 22111 12111
Q ss_pred h-HHHHHHHHHHHHHHHH-cCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 319 V-EVTFLAQKMIAARCNK-QGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 319 ~-e~v~~~qk~ii~~c~~-~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
. +.+.. .++..++ .+.|+++...+= | - .++..++..|||+++..
T Consensus 189 ~~~~~~~----~i~~lr~~~~~pi~vggGI~---t---~--------e~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 189 GALPLHH----LIEKLKEYHAAPALQGFGIS---S---P--------EQVSAAVRAGAAGAISG 234 (268)
T ss_dssp C--CCHH----HHHHHHHTTCCCEEEESSCC---S---H--------HHHHHHHHTTCSEEEEC
T ss_pred CCchHHH----HHHHHHhccCCcEEEECCCC---C---H--------HHHHHHHHcCCCEEEEC
Confidence 1 11111 1222222 378999876631 1 2 56677788999999997
No 127
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=77.21 E-value=16 Score=36.64 Aligned_cols=98 Identities=12% Similarity=0.108 Sum_probs=62.0
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhhH-HHHHHHHHhcCC-CceEEEEec---CHHHHhhHHHHHhh-cCEEEEc
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANSI-REMRGMLEDHVD-RVLILAKIE---TLLGMEYMDEIIME-SDGVVLN 309 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~di-~~~r~~l~~~~~-~i~IiakIE---t~~av~nldeIl~~-~DgImIa 309 (547)
...+++.++.|+|+|++. +--|.++= +-++...+..+. ++.+|+.+= |.++++.....-+. +||+|+-
T Consensus 31 ~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~ 110 (301)
T 3m5v_A 31 ARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSV 110 (301)
T ss_dssp HHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 345678889999999874 22233333 334444555566 899999874 55666655555554 6999988
Q ss_pred CCcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 310 RIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 310 rgDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
+-...- .+.+.+...-+.| |.+.+.|+++-
T Consensus 111 ~P~y~~-~s~~~l~~~f~~v---a~a~~lPiilY 140 (301)
T 3m5v_A 111 APYYNK-PTQQGLYEHYKAI---AQSVDIPVLLY 140 (301)
T ss_dssp CCCSSC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCCCC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 655432 2445666555555 44558999974
No 128
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=76.94 E-value=18 Score=35.86 Aligned_cols=118 Identities=12% Similarity=0.067 Sum_probs=75.0
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcch-HHHHHHHHHHHHHHhhhhhhhHH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQ-AHHRVDILKEILKKTESVLWEKQ 407 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Et-a~eaV~~m~~I~~~aE~~~~~~~ 407 (547)
+...|++.|.++.+. .|..... .-+...-..|++.+... ++. -.++.+...++..+ +..++-
T Consensus 77 ~A~~a~~~G~~~~i~-----~p~~~~~--------~k~~~~~~~Ga~V~~~~-~~~~~~~~~~~a~~l~~~-~~~~~~-- 139 (304)
T 1ve1_A 77 LAMIAASRGYRLILT-----MPAQMSE--------ERKRVLKAFGAELVLTD-PERRMLAAREEALRLKEE-LGAFMP-- 139 (304)
T ss_dssp HHHHHHHHTCEEEEE-----EETTCCH--------HHHHHHHHTTCEEEEEC-TTTHHHHHHHHHHHHHHH-HTCBCC--
T ss_pred HHHHHHHcCCcEEEE-----eCCCCCH--------HHHHHHHHcCCEEEEEC-CCCCHHHHHHHHHHHHhc-CCCEeC--
Confidence 567789999998875 3433222 44455666799999988 553 33666665555544 221111
Q ss_pred HHHHhhhcCCCCCChhh--H-HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----cCCCCCEEEEeCchh
Q psy6272 408 VFEDLCALACPPLDPAH--S-IVIACVNAALKCQ--AVAIIVITCSGYSAKLVSK----YRPQCPILAVSSLGY 472 (547)
Q Consensus 408 ~f~~~~~~~~~~~~~~~--~-ia~aav~~a~~~~--a~aIvv~T~sG~tA~~isk----~RP~~pIiavt~~~~ 472 (547)
.+..++.. . ....+.|+..++. .++||+.+-+|.++.-+++ ..|...|++|.+...
T Consensus 140 ---------~~~~n~~~~~g~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~ 204 (304)
T 1ve1_A 140 ---------DQFKNPANVRAHYETTGPELYEALEGRIDAFVYGSGTGGTITGVGRYLKERIPHVKVIAVEPARS 204 (304)
T ss_dssp ---------CTTTCHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHTTCTTCEEEEEEEGGG
T ss_pred ---------CCCCChhHHHHHHHHHHHHHHHHcCCCCCEEEEecCCchhHHHHHHHHHHhCCCCEEEEEecCCC
Confidence 01112222 1 1334567777764 7999999999999876665 479999999998654
No 129
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=76.76 E-value=31 Score=34.21 Aligned_cols=98 Identities=13% Similarity=0.088 Sum_probs=63.3
Q ss_pred HHHHHHHHH-cCCcEEEEc------ccCChhhHHH-HHHHHHhcCCCceEEEEecC---HHHHhhHHHHHhh-cCEEEEc
Q psy6272 242 KHVVDLIVR-EAVDIIIMS------SVTGANSIRE-MRGMLEDHVDRVLILAKIET---LLGMEYMDEIIME-SDGVVLN 309 (547)
Q Consensus 242 ~~di~~~~~-~g~d~I~~s------fV~sa~di~~-~r~~l~~~~~~i~IiakIEt---~~av~nldeIl~~-~DgImIa 309 (547)
...+++.++ .|+|+|++. +--|.++=.+ ++...+..+.++.||+.+=+ .++++.....-+. +||+|+-
T Consensus 27 ~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~ 106 (293)
T 1f6k_A 27 RQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAV 106 (293)
T ss_dssp HHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 455678899 999999873 3334444444 44445555678999998743 6777666655554 7999887
Q ss_pred CCcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 310 RIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 310 rgDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
+-.+.- .+.+.+...-+.|.+ +.+.|+++-
T Consensus 107 ~P~y~~-~~~~~l~~~f~~va~---a~~lPiilY 136 (293)
T 1f6k_A 107 TPFYYK-FSFPEIKHYYDTIIA---ETGSNMIVY 136 (293)
T ss_dssp CCCSSC-CCHHHHHHHHHHHHH---HHCCCEEEE
T ss_pred CCCCCC-CCHHHHHHHHHHHHH---hCCCCEEEE
Confidence 655422 244666666665644 457899874
No 130
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=76.49 E-value=22 Score=35.55 Aligned_cols=98 Identities=13% Similarity=0.116 Sum_probs=63.9
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhhHHHH-HHHHHhcCCCceEEEEec---CHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANSIREM-RGMLEDHVDRVLILAKIE---TLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~di~~~-r~~l~~~~~~i~IiakIE---t~~av~nldeIl~~-~DgImIar 310 (547)
...+++.++.|+|+|++. +--|.++=.++ +...+..+.++.||+.+= |.++++.....-+. +||+|+-+
T Consensus 35 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 114 (303)
T 2wkj_A 35 RRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVT 114 (303)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecC
Confidence 455678899999999873 33344444444 444555567899999875 46777766665555 79998876
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcC-CcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQG-KPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~g-KPvi~a 343 (547)
-.+.- .+.+.+...-+.|.+ +.+ .|+++-
T Consensus 115 P~y~~-~s~~~l~~~f~~va~---a~~~lPiilY 144 (303)
T 2wkj_A 115 PFYYP-FSFEEHCDHYRAIID---SADGLPMVVY 144 (303)
T ss_dssp CCSSC-CCHHHHHHHHHHHHH---HHTTCCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHHHH---hCCCCCEEEE
Confidence 54432 255667666666654 445 999874
No 131
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=76.30 E-value=59 Score=32.87 Aligned_cols=128 Identities=13% Similarity=0.227 Sum_probs=78.7
Q ss_pred HHHHHHHHHcCCcEEEEcc---------------cCChhhHHHHHHHHHhcCCCceEEEEecCH------HHHhhHHHHH
Q psy6272 242 KHVVDLIVREAVDIIIMSS---------------VTGANSIREMRGMLEDHVDRVLILAKIETL------LGMEYMDEII 300 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sf---------------V~sa~di~~~r~~l~~~~~~i~IiakIEt~------~av~nldeIl 300 (547)
.+.++...+.|+++|.+== +...+-+.+++..... +.+..|+|+.|.. ++++......
T Consensus 107 ~~~v~~l~~aGaagv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A-~~~~~I~ARtda~~~~g~~~ai~Ra~ay~ 185 (305)
T 3ih1_A 107 ARTAVEMVEAKVAAVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEV-APSLYIVARTDARGVEGLDEAIERANAYV 185 (305)
T ss_dssp HHHHHHHHHTTCSEEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHH-CTTSEEEEEECCHHHHCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCcEEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHc-CCCeEEEEeeccccccCHHHHHHHHHHHH
Confidence 3345666778898886521 1112456666666554 7789999999986 4444444444
Q ss_pred hh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCC---CC--CcccccccCccchhhHHHHHHhCc
Q psy6272 301 ME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILP---DH--NVEEYSDVSIGDMNDVNSIVQDGA 374 (547)
Q Consensus 301 ~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le---~P--traE~~~~~~~~~~Dv~nav~~g~ 374 (547)
++ +|+||+- + ++.. ..+-+.|++..+|+++ .|++ .| +.+|. -..|+
T Consensus 186 eAGAD~i~~e-~-------~~~~----~~~~~i~~~~~~P~~~--n~~~~g~tp~~~~~eL--------------~~lGv 237 (305)
T 3ih1_A 186 KAGADAIFPE-A-------LQSE----EEFRLFNSKVNAPLLA--NMTEFGKTPYYSAEEF--------------ANMGF 237 (305)
T ss_dssp HHTCSEEEET-T-------CCSH----HHHHHHHHHSCSCBEE--ECCTTSSSCCCCHHHH--------------HHTTC
T ss_pred HcCCCEEEEc-C-------CCCH----HHHHHHHHHcCCCEEE--eecCCCCCCCCCHHHH--------------HHcCC
Confidence 44 6999985 1 1111 2244557777899975 4554 22 33333 34599
Q ss_pred cEEeeCCcchHHHHHHHHHHHHHHh
Q psy6272 375 DVVVLTQSEQAHHRVDILKEILKKT 399 (547)
Q Consensus 375 D~vmLsk~Eta~eaV~~m~~I~~~a 399 (547)
.-+... .-...-+.+.|.+.+++.
T Consensus 238 ~~v~~~-~~~~raa~~a~~~~~~~i 261 (305)
T 3ih1_A 238 QMVIYP-VTSLRVAAKAYENVFTLI 261 (305)
T ss_dssp SEEEEC-SHHHHHHHHHHHHHHHHH
T ss_pred CEEEEc-hHHHHHHHHHHHHHHHHH
Confidence 999997 555556667776666655
No 132
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=76.07 E-value=9.3 Score=40.57 Aligned_cols=119 Identities=14% Similarity=0.088 Sum_probs=76.0
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcc-hHHHHHHHHHHHHHHhhhhhhhHH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSE-QAHHRVDILKEILKKTESVLWEKQ 407 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~E-ta~eaV~~m~~I~~~aE~~~~~~~ 407 (547)
+...|++.|.|+.+. .|..+.. ..+...-..|++.+... ++ +..++++...+++++....++..
T Consensus 190 lA~aAa~~Gl~~~Iv-----mP~~~s~--------~k~~~~r~~GAeVv~v~-~~~~~~~a~~~a~el~~~~~~~~~i~- 254 (430)
T 4aec_A 190 LAFIAASRGYRLILT-----MPASMSM--------ERRVLLKAFGAELVLTD-PAKGMTGAVQKAEEILKNTPDAYMLQ- 254 (430)
T ss_dssp HHHHHHHHTCEEEEE-----EETTSCH--------HHHHHHHHTTCEEEEEC-GGGHHHHHHHHHHHHHHHSTTEEECC-
T ss_pred HHHHHHHhCCEEEEE-----EcCCCCH--------HHHHHHHHCCCEEEEEC-CCCChHHHHHHHHHHHHhcCCcEEec-
Confidence 566799999998875 4444333 44555667899999887 54 33377766666655432222111
Q ss_pred HHHHhhhcCCCCCChh---hHHHHHHHHHHHhc--CCcEEEEEcCCchHHHHHHh----cCCCCCEEEEeCchh
Q psy6272 408 VFEDLCALACPPLDPA---HSIVIACVNAALKC--QAVAIIVITCSGYSAKLVSK----YRPQCPILAVSSLGY 472 (547)
Q Consensus 408 ~f~~~~~~~~~~~~~~---~~ia~aav~~a~~~--~a~aIvv~T~sG~tA~~isk----~RP~~pIiavt~~~~ 472 (547)
+..++. .--...+.|+..++ ..++||+..-+|.+.--+++ ..|.+.|++|.+...
T Consensus 255 ----------~~~np~~~~aG~~T~a~EI~eQl~~~~D~vVvpvG~GGtlaGi~~~lk~~~p~~kVigVep~~s 318 (430)
T 4aec_A 255 ----------QFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEPTES 318 (430)
T ss_dssp ----------TTTCTHHHHHHHHTHHHHHHHHTTSCEEEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGGG
T ss_pred ----------CCCCccHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEEeCCC
Confidence 111111 11233456777666 47899999999998876665 489999999987543
No 133
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=75.54 E-value=23 Score=33.20 Aligned_cols=112 Identities=15% Similarity=0.093 Sum_probs=63.0
Q ss_pred HHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceE-EE-EecCHHHHhhHHHHHhhcCEEEEcCCcccccCCh----
Q psy6272 246 DLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLI-LA-KIETLLGMEYMDEIIMESDGVVLNRIQLAVATSV---- 319 (547)
Q Consensus 246 ~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~I-ia-kIEt~~av~nldeIl~~~DgImIargDLg~e~~~---- 319 (547)
+.+.+.|+|+|.+..--..+.++.+.+.+.+.|....+ +. -+ |....+.+.++ . .+-+.+.++-++++.|.
T Consensus 74 ~~~~~~Gad~itvh~~~g~~~l~~~~~~~~~~g~~~~~~ll~~~-t~~~~~~l~~~-~-~~~~vl~~a~~~~~~G~~g~~ 150 (216)
T 1q6o_A 74 RMCFEANADWVTVICCADINTAKGALDVAKEFNGDVQIELTGYW-TWEQAQQWRDA-G-IGQVVYHRSRDAQAAGVAWGE 150 (216)
T ss_dssp HHHHHTTCSEEEEETTSCHHHHHHHHHHHHHTTCEEEEEECSCC-CHHHHHHHHHT-T-CCEEEEECCHHHHHTTCCCCH
T ss_pred HHHHhCCCCEEEEeccCCHHHHHHHHHHHHHcCCCceeeeeeCC-ChhhHHHHHhc-C-cHHHHHHHHHHHHhcCCCCCH
Confidence 36778999999998766666688888888776655322 11 11 12344455443 2 34455544445555443
Q ss_pred HHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 320 EVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 320 e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
+++..+. +.+ ..+.|+++...+ +| ..+..++..|+|.+...
T Consensus 151 ~~i~~lr----~~~-~~~~~i~v~GGI--~~-------------~~~~~~~~aGad~ivvG 191 (216)
T 1q6o_A 151 ADITAIK----RLS-DMGFKVTVTGGL--AL-------------EDLPLFKGIPIHVFIAG 191 (216)
T ss_dssp HHHHHHH----HHH-HTTCEEEEESSC--CG-------------GGGGGGTTSCCSEEEES
T ss_pred HHHHHHH----Hhc-CCCCcEEEECCc--Ch-------------hhHHHHHHcCCCEEEEe
Confidence 3333322 223 335667764432 22 22344567799999987
No 134
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=75.53 E-value=45 Score=33.51 Aligned_cols=141 Identities=13% Similarity=0.110 Sum_probs=80.8
Q ss_pred CCCChhhHHHHH-HHHHcCCcEEEEcc-cCC-----hhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCE-
Q psy6272 235 PVIADRDKHVVD-LIVREAVDIIIMSS-VTG-----ANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDG- 305 (547)
Q Consensus 235 p~lt~~D~~di~-~~~~~g~d~I~~sf-V~s-----a~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~Dg- 305 (547)
..++..|+..|- ...+.|+|.|=+.| +.. ..|..++...+.+. .++.+.+-+.+..++ +..++. .|.
T Consensus 23 ~~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~~~i---~~a~~~g~~~v 98 (307)
T 1ydo_A 23 VWIATEDKITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDRE-KGVTYAALVPNQRGL---ENALEGGINEA 98 (307)
T ss_dssp SCCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-TTCEEEEECCSHHHH---HHHHHHTCSEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhc-CCCeEEEEeCCHHhH---HHHHhCCcCEE
Confidence 346777776655 55558999998854 332 14555555555433 455665555454443 333333 464
Q ss_pred -EEEcCCcc----cccCChHHHHHHHHHHHHHHHHcCCcEEEE--cCC-CCCCCcccccccCccchhhHH-HHHHhCccE
Q psy6272 306 -VVLNRIQL----AVATSVEVTFLAQKMIAARCNKQGKPFLVV--GDI-LPDHNVEEYSDVSIGDMNDVN-SIVQDGADV 376 (547)
Q Consensus 306 -ImIargDL----g~e~~~e~v~~~qk~ii~~c~~~gKPvi~a--Tq~-Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~ 376 (547)
|+++-.|+ -+....++.....+.+++.++++|+.|-.. +-+ .|.-+|.+. .+.-+++ .+...|+|.
T Consensus 99 ~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~Ga~~ 173 (307)
T 1ydo_A 99 CVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPI-----EQVIRLSEALFEFGISE 173 (307)
T ss_dssp EEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCH-----HHHHHHHHHHHHHTCSC
T ss_pred EEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCH-----HHHHHHHHHHHhcCCCE
Confidence 45555553 233456777777788999999999998521 110 111122222 1225555 346789999
Q ss_pred EeeCCcchHH
Q psy6272 377 VVLTQSEQAH 386 (547)
Q Consensus 377 vmLsk~Eta~ 386 (547)
+.|. +|.=
T Consensus 174 i~l~--DT~G 181 (307)
T 1ydo_A 174 LSLG--DTIG 181 (307)
T ss_dssp EEEE--CSSC
T ss_pred EEEc--CCCC
Confidence 9996 5543
No 135
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=75.52 E-value=22 Score=35.32 Aligned_cols=98 Identities=10% Similarity=0.059 Sum_probs=63.0
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhhH-HHHHHHHHhcCCCceEEEEecC---HHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANSI-REMRGMLEDHVDRVLILAKIET---LLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~di-~~~r~~l~~~~~~i~IiakIEt---~~av~nldeIl~~-~DgImIar 310 (547)
.+.+++.++.|+|+|++. +--|.++= +-++...+..+.++.+|+.+=+ .++++.....-+. +||+|+-+
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 103 (289)
T 2yxg_A 24 EENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSIT 103 (289)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 345678899999998863 22333333 3344445555668999998743 6677666655554 79998876
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-.+.- .+.+.+...-+.| |.+.+.|+++-
T Consensus 104 P~y~~-~s~~~l~~~f~~i---a~a~~lPiilY 132 (289)
T 2yxg_A 104 PYYNK-PTQEGLRKHFGKV---AESINLPIVLY 132 (289)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 55432 2456666666655 45568999874
No 136
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=75.31 E-value=6.7 Score=37.31 Aligned_cols=124 Identities=16% Similarity=0.213 Sum_probs=79.2
Q ss_pred hhHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHH----HHhh--cCEEEEcCCcc
Q psy6272 240 RDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDE----IIME--SDGVVLNRIQL 313 (547)
Q Consensus 240 ~D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nlde----Il~~--~DgImIargDL 313 (547)
+|.++++.+++..++.|++.+. +-..+.++.+.+.+.++ .++..++..+|+.+=.+ +... .|||+=.+.-+
T Consensus 17 r~~~~l~~al~s~~~~ifll~g-~i~~l~~~v~~lk~~~K--~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGIIsTk~~~ 93 (192)
T 3kts_A 17 HNQKDMEKILELDLTYMVMLET-HVAQLKALVKYAQAGGK--KVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNA 93 (192)
T ss_dssp SSSHHHHHHTTSSCCEEEECSE-ETTTHHHHHHHHHHTTC--EEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEESCHHH
T ss_pred cCHHHHHHHHcCCCCEEEEecC-cHHHHHHHHHHHHHcCC--eEEEecCchhccCCcHHHHHHHHhCCCCCEEEeCcHHH
Confidence 6788899999999999999986 55778888888877776 44447776666543111 1111 57777655331
Q ss_pred ---cccCCh-----------------------------HHHHHH-HHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCc
Q psy6272 314 ---AVATSV-----------------------------EVTFLA-QKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSI 360 (547)
Q Consensus 314 ---g~e~~~-----------------------------e~v~~~-qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~ 360 (547)
+-+.|+ |-+|.. -+.|-+.++..+.|+|...-+- .-
T Consensus 94 i~~Ak~~gL~tIqR~FliDS~al~~~~~~i~~~~PD~iEiLPGi~p~iI~~i~~~~~~PiIaGGlI~------~~----- 162 (192)
T 3kts_A 94 IMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIE------TS----- 162 (192)
T ss_dssp HHHHHHTTCEEEEEEECCSHHHHHHHHHHHHHHCCSEEEEECTTCHHHHHHHHHHHCCCEEEESSCC------SH-----
T ss_pred HHHHHHCCCeEEEEEEEEEcchHHHHHHHHhhcCCCEEEECCchhHHHHHHHHHhcCCCEEEECCcC------CH-----
Confidence 111111 111111 1323344566799999876532 23
Q ss_pred cchhhHHHHHHhCccEEeeC
Q psy6272 361 GDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 361 ~~~~Dv~nav~~g~D~vmLs 380 (547)
.|+.+|+..|||+|.-|
T Consensus 163 ---edv~~al~aGA~aVsTs 179 (192)
T 3kts_A 163 ---EQVNQVIASGAIAVTTS 179 (192)
T ss_dssp ---HHHHHHHTTTEEEEEEC
T ss_pred ---HHHHHHHHcCCeEEEeC
Confidence 78899999999999998
No 137
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=75.19 E-value=13 Score=37.29 Aligned_cols=122 Identities=14% Similarity=0.126 Sum_probs=75.3
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchH-HHHHHHHHHHHHHhhhhhhhHH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQA-HHRVDILKEILKKTESVLWEKQ 407 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta-~eaV~~m~~I~~~aE~~~~~~~ 407 (547)
+...|+++|.|+.+. .|..... .-+...-..|++.+... ++.. .++.+...+++.+-...++-.+
T Consensus 82 lA~aa~~~G~~~~iv-----~p~~~~~--------~k~~~~~~~GA~V~~~~-~~~~~~~~~~~a~~~~~~~~~~~~i~~ 147 (322)
T 1z7w_A 82 LAFTAAAKGYKLIIT-----MPASMST--------ERRIILLAFGVELVLTD-PAKGMKGAIAKAEEILAKTPNGYMLQQ 147 (322)
T ss_dssp HHHHHHHHTCEEEEE-----EETTSCH--------HHHHHHHHTTCEEEEEC-GGGHHHHHHHHHHHHHHHCTTEEECCT
T ss_pred HHHHHHHcCCCEEEE-----eCCCCCH--------HHHHHHHHcCCEEEEeC-CCCCHHHHHHHHHHHHHhCCCeEeCCC
Confidence 567789999999885 3443333 44555666799988887 5432 3666666666554322111000
Q ss_pred HHHHhhhcCCCCCChhhHHHHHHHHHHHhc--CCcEEEEEcCCchHHHHHHh----cCCCCCEEEEeCchh
Q psy6272 408 VFEDLCALACPPLDPAHSIVIACVNAALKC--QAVAIIVITCSGYSAKLVSK----YRPQCPILAVSSLGY 472 (547)
Q Consensus 408 ~f~~~~~~~~~~~~~~~~ia~aav~~a~~~--~a~aIvv~T~sG~tA~~isk----~RP~~pIiavt~~~~ 472 (547)
|. .+..+..--...+.|+..++ +.++||+.+-+|.+..-+++ ..|.+.|++|.+...
T Consensus 148 -~~-------n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~ 210 (322)
T 1z7w_A 148 -FE-------NPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEPVES 210 (322)
T ss_dssp -TT-------CTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGG
T ss_pred -CC-------ChhHHHHHHHHHHHHHHHHhcCCCCEEEEecCccHhHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 10 00011111223456777776 47999999999999876665 479999999998643
No 138
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=75.01 E-value=41 Score=34.55 Aligned_cols=121 Identities=9% Similarity=0.055 Sum_probs=67.0
Q ss_pred CCChhhHHHH--------HHHHHcCCcEEEE-------------cccCChhh----------------HHHHHHHHHhcC
Q psy6272 236 VIADRDKHVV--------DLIVREAVDIIIM-------------SSVTGANS----------------IREMRGMLEDHV 278 (547)
Q Consensus 236 ~lt~~D~~di--------~~~~~~g~d~I~~-------------sfV~sa~d----------------i~~~r~~l~~~~ 278 (547)
.||..|+..+ +.+.+.|+|+|=+ |..+...| ++.+|+.+ +
T Consensus 150 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslenr~r~~~eiv~avr~~v---g 226 (364)
T 1vyr_A 150 ALELDEIPGIVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVENRARLVLEVVDAVCNEW---S 226 (364)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHS---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhcChhhHHHHHHHHHHhc---C
Confidence 4677776555 3567899999998 43343333 33333333 4
Q ss_pred CCceEEEEecCH---H-------HHhhHHHHHhh-----cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 279 DRVLILAKIETL---L-------GMEYMDEIIME-----SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 279 ~~i~IiakIEt~---~-------av~nldeIl~~-----~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
.+ .|..||-.. . .++..-++++. +|.|-+..+...-.-+. .+. .+-+..+..++||+..
T Consensus 227 ~~-~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~-~~~----~~~~v~~~~~iPvi~~ 300 (364)
T 1vyr_A 227 AD-RIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPY-SEA----FRQKVRERFHGVIIGA 300 (364)
T ss_dssp GG-GEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCC-CHH----HHHHHHHHCCSEEEEE
T ss_pred CC-cEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcc-cHH----HHHHHHHHCCCCEEEE
Confidence 45 677777332 1 23333333333 48887765432111111 111 1112234568999987
Q ss_pred cCCCCCCCcccccccCccchhhHHHHHHhC-ccEEeeC
Q psy6272 344 GDILPDHNVEEYSDVSIGDMNDVNSIVQDG-ADVVVLT 380 (547)
Q Consensus 344 Tq~Le~PtraE~~~~~~~~~~Dv~nav~~g-~D~vmLs 380 (547)
..+ | . .|+..++..| +|+|++.
T Consensus 301 Ggi----t---~--------~~a~~~l~~g~aD~V~~g 323 (364)
T 1vyr_A 301 GAY----T---A--------EKAEDLIGKGLIDAVAFG 323 (364)
T ss_dssp SSC----C---H--------HHHHHHHHTTSCSEEEES
T ss_pred CCc----C---H--------HHHHHHHHCCCccEEEEC
Confidence 653 2 2 5566788888 9999998
No 139
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=74.91 E-value=23 Score=33.44 Aligned_cols=90 Identities=16% Similarity=0.025 Sum_probs=55.1
Q ss_pred HHHHHHHHHcCCcEEEEc-----ccCC----hhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCC
Q psy6272 242 KHVVDLIVREAVDIIIMS-----SVTG----ANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRI 311 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s-----fV~s----a~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIarg 311 (547)
.++++.+.+.|+|+|-+- |+.+ .+.++++++.. +..+.+..++..++ +.++...+. +|+|.+.-.
T Consensus 26 ~~~i~~~~~~G~d~i~l~~~dg~f~~~~~~~~~~i~~l~~~~---~~~~~v~l~vnd~~--~~v~~~~~~Gad~v~vh~~ 100 (230)
T 1rpx_A 26 GEQVKAIEQAGCDWIHVDVMDGRFVPNITIGPLVVDSLRPIT---DLPLDVHLMIVEPD--QRVPDFIKAGADIVSVHCE 100 (230)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHGGGC---CSCEEEEEESSSHH--HHHHHHHHTTCSEEEEECS
T ss_pred HHHHHHHHHCCCCEEEEeeccCCcccccccCHHHHHHHHhcc---CCcEEEEEEecCHH--HHHHHHHHcCCCEEEEEec
Confidence 556788889999998884 5554 23444444322 33455666777643 456666555 799987732
Q ss_pred cccccCChHHHHHHHHHHHHHHHHcCCcEEEEc
Q psy6272 312 QLAVATSVEVTFLAQKMIAARCNKQGKPFLVVG 344 (547)
Q Consensus 312 DLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aT 344 (547)
.... +.. ...++.++++|+.++++.
T Consensus 101 ~~~~----~~~----~~~~~~~~~~g~~ig~~~ 125 (230)
T 1rpx_A 101 QSST----IHL----HRTINQIKSLGAKAGVVL 125 (230)
T ss_dssp TTTC----SCH----HHHHHHHHHTTSEEEEEE
T ss_pred Cccc----hhH----HHHHHHHHHcCCcEEEEe
Confidence 0011 111 246677788899988874
No 140
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=74.82 E-value=23 Score=36.11 Aligned_cols=98 Identities=10% Similarity=0.106 Sum_probs=64.0
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhh-HHHHHHHHHhcCCCceEEEEecC---HHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANS-IREMRGMLEDHVDRVLILAKIET---LLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~d-i~~~r~~l~~~~~~i~IiakIEt---~~av~nldeIl~~-~DgImIar 310 (547)
...+++.++.|+|+|++. +--|.++ .+-++...+..+.++.||+-+=+ .++++.....-+. +||+|+.+
T Consensus 58 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~ 137 (332)
T 2r8w_A 58 SALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEAAGADALLLAP 137 (332)
T ss_dssp HHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 355678899999999863 2333333 34444445555678999998753 6777666655554 79999876
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-.+.- .+.+.+...-+.| |.+.+.|+++-
T Consensus 138 P~Y~~-~s~~~l~~~f~~V---A~a~~lPiilY 166 (332)
T 2r8w_A 138 VSYTP-LTQEEAYHHFAAV---AGATALPLAIY 166 (332)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 55432 3456666666655 45568999974
No 141
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=74.68 E-value=20 Score=36.18 Aligned_cols=98 Identities=22% Similarity=0.223 Sum_probs=59.5
Q ss_pred HHHHHHHHHcCCcEEEEccc------CChhhH-HHHHHHHHhcCCCceEEEEec--CHHHHhhHHHHHhh-cCEEEEcCC
Q psy6272 242 KHVVDLIVREAVDIIIMSSV------TGANSI-REMRGMLEDHVDRVLILAKIE--TLLGMEYMDEIIME-SDGVVLNRI 311 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV------~sa~di-~~~r~~l~~~~~~i~IiakIE--t~~av~nldeIl~~-~DgImIarg 311 (547)
...+++.++.|+|+|++.=- -|.++= +-++...+..+.++.||+-+= |.++++.....-+. +||+|+-+-
T Consensus 36 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~Gadavlv~~P 115 (316)
T 3e96_A 36 KETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAAGADAVMIHMP 115 (316)
T ss_dssp HHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred HHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 34567889999999886432 133333 334444555567899999883 33333333333333 699999744
Q ss_pred cccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 312 QLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 312 DLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
.. ...+.+.+...-+.|.+++ +.|+++-
T Consensus 116 ~y-~~~s~~~l~~~f~~va~a~---~lPiilY 143 (316)
T 3e96_A 116 IH-PYVTAGGVYAYFRDIIEAL---DFPSLVY 143 (316)
T ss_dssp CC-SCCCHHHHHHHHHHHHHHH---TSCEEEE
T ss_pred CC-CCCCHHHHHHHHHHHHHhC---CCCEEEE
Confidence 33 2235567776666665554 7999886
No 142
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=74.40 E-value=6.8 Score=37.95 Aligned_cols=108 Identities=10% Similarity=0.046 Sum_probs=66.6
Q ss_pred CcEEEEcccCChhhHHHHHH---HHHhcCCCceEEEEecCHHHHhhHHHHHh--hcCEEEEcCCcc---cccCChHHHHH
Q psy6272 253 VDIIIMSSVTGANSIREMRG---MLEDHVDRVLILAKIETLLGMEYMDEIIM--ESDGVVLNRIQL---AVATSVEVTFL 324 (547)
Q Consensus 253 ~d~I~~sfV~sa~di~~~r~---~l~~~~~~i~IiakIEt~~av~nldeIl~--~~DgImIargDL---g~e~~~e~v~~ 324 (547)
+|++.+-.-.+.+++.++.+ .+.+.|..+.+-.+-.|+ ++.+++++. ..|.|++..-+- |.......+..
T Consensus 86 Ad~itvH~ea~~~~~~~~i~~~~~i~~~G~k~gvalnp~tp--~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~k 163 (227)
T 1tqx_A 86 SNQLTFHFEALNEDTERCIQLAKEIRDNNLWCGISIKPKTD--VQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGK 163 (227)
T ss_dssp SSEEEEEGGGGTTCHHHHHHHHHHHHTTTCEEEEEECTTSC--GGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHH
T ss_pred CCEEEEeecCCccCHHHHHHHHHHHHHcCCeEEEEeCCCCc--HHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHH
Confidence 99998876555446777777 787777776665555554 778899999 789997665443 33333222222
Q ss_pred HHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 325 AQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 325 ~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
+++ +-+... +.++.+...+ . . ..+..++..|+|.+...
T Consensus 164 i~~-lr~~~~--~~~I~VdGGI--~-----~--------~ti~~~~~aGAd~~V~G 201 (227)
T 1tqx_A 164 VSF-LRKKYK--NLNIQVDGGL--N-----I--------ETTEISASHGANIIVAG 201 (227)
T ss_dssp HHH-HHHHCT--TCEEEEESSC--C-----H--------HHHHHHHHHTCCEEEES
T ss_pred HHH-HHHhcc--CCeEEEECCC--C-----H--------HHHHHHHHcCCCEEEEe
Confidence 221 111111 6777665543 1 1 44555677799999986
No 143
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=74.05 E-value=15 Score=37.07 Aligned_cols=98 Identities=14% Similarity=0.130 Sum_probs=61.9
Q ss_pred HHHHHHHHHcCCcEEEEc-------ccCChhhHHHHHHHHHhcCCCceEEEEec---CHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS-------SVTGANSIREMRGMLEDHVDRVLILAKIE---TLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s-------fV~sa~di~~~r~~l~~~~~~i~IiakIE---t~~av~nldeIl~~-~DgImIar 310 (547)
...+++.++.|+|+|++. .....|-.+-++...+..+.++.||+-+= |.++++.....-+. +||+|+-+
T Consensus 46 ~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~ 125 (315)
T 3si9_A 46 CNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVT 125 (315)
T ss_dssp HHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 345678899999999853 22233333444445555567889998874 56666665555555 69998876
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-...- .+.+.+...-+.|. .+.+.|+++-
T Consensus 126 P~y~~-~~~~~l~~~f~~va---~a~~lPiilY 154 (315)
T 3si9_A 126 PYYNR-PNQRGLYTHFSSIA---KAISIPIIIY 154 (315)
T ss_dssp CCSSC-CCHHHHHHHHHHHH---HHCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHHH---HcCCCCEEEE
Confidence 54432 24456665555554 4558999975
No 144
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=74.00 E-value=23 Score=35.18 Aligned_cols=98 Identities=10% Similarity=0.147 Sum_probs=63.0
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhhHHH-HHHHHHhcCCCceEEEEec---CHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANSIRE-MRGMLEDHVDRVLILAKIE---TLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~di~~-~r~~l~~~~~~i~IiakIE---t~~av~nldeIl~~-~DgImIar 310 (547)
.+.+++.++.|+|+|++. +--|.++=.+ ++...+..+.++.+|+.+= |.++++.....-+. +||+|+-+
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (294)
T 2ehh_A 24 GNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVV 103 (294)
T ss_dssp HHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 455678899999999873 2334444433 4444555566889999874 36666666655554 69998876
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-.+.- .+.+.+...-+.| |.+.+.|+++-
T Consensus 104 P~y~~-~s~~~l~~~f~~v---a~a~~lPiilY 132 (294)
T 2ehh_A 104 PYYNK-PTQRGLYEHFKTV---AQEVDIPIIIY 132 (294)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HHHCCSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 55432 2445666555555 45668999874
No 145
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=73.82 E-value=16 Score=37.52 Aligned_cols=98 Identities=16% Similarity=0.163 Sum_probs=63.4
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhhHHH-HHHHHHhcCCCceEEEEec---CHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANSIRE-MRGMLEDHVDRVLILAKIE---TLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~di~~-~r~~l~~~~~~i~IiakIE---t~~av~nldeIl~~-~DgImIar 310 (547)
.+.+++.++.|+|+|++. +--|.++=.+ ++...+..+.++.||+-+= |.++++.....-+. +||+|+-+
T Consensus 55 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~ 134 (343)
T 2v9d_A 55 AALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQAGADGIVVIN 134 (343)
T ss_dssp HHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 345678899999999873 3334444444 4444555566889999875 46777666665554 79998876
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-.+.- .+.+.+...-+.| |.+.+.|+++-
T Consensus 135 P~Y~~-~s~~~l~~~f~~V---A~a~~lPiilY 163 (343)
T 2v9d_A 135 PYYWK-VSEANLIRYFEQV---ADSVTLPVMLY 163 (343)
T ss_dssp CSSSC-CCHHHHHHHHHHH---HHTCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 55432 2456666655555 45568999874
No 146
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=73.62 E-value=21 Score=35.69 Aligned_cols=98 Identities=15% Similarity=0.167 Sum_probs=63.4
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhhHHH-HHHHHHhcCCCceEEEEecC---HHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANSIRE-MRGMLEDHVDRVLILAKIET---LLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~di~~-~r~~l~~~~~~i~IiakIEt---~~av~nldeIl~~-~DgImIar 310 (547)
...+++.++.|+|+|++. +--|.++=.+ ++...+..+.++.||+.+=+ .++++.....-+. +||+|+.+
T Consensus 24 ~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (297)
T 2rfg_A 24 AGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQAGADAVLCVA 103 (297)
T ss_dssp HHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 355678899999998863 2334444433 44445555667899998743 6777766665555 79999976
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-.+.- .+.+.+...-+.| |.+.+.|+++-
T Consensus 104 P~y~~-~s~~~l~~~f~~v---a~a~~lPiilY 132 (297)
T 2rfg_A 104 GYYNR-PSQEGLYQHFKMV---HDAIDIPIIVY 132 (297)
T ss_dssp CTTTC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 65432 2445666655555 44568999874
No 147
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=73.32 E-value=23 Score=35.38 Aligned_cols=121 Identities=14% Similarity=0.020 Sum_probs=72.1
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcc-cccccCccchhhHHHHHHhCccEEeeCCcchH----HHHHHHHHHHHHHhhhhh
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVE-EYSDVSIGDMNDVNSIVQDGADVVVLTQSEQA----HHRVDILKEILKKTESVL 403 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~Ptra-E~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta----~eaV~~m~~I~~~aE~~~ 403 (547)
+...|++.|.|+.+. .|... .. .-+...-..|++.++.. ++.- .++.+...++.++-...+
T Consensus 87 lA~~a~~~G~~~~iv-----~p~~~~~~--------~k~~~~~~~GA~v~~~~-~~~~~~~~~~~~~~a~~l~~~~~~~~ 152 (325)
T 1j0a_A 87 TGLAAKKLGLDAILV-----LRGKEELK--------GNYLLDKIMGIETRVYD-AKDSFELMKYAEEIAEELKREGRKPY 152 (325)
T ss_dssp HHHHHHHTTCEEEEE-----EESCCCSC--------HHHHHHHHTTCEEEEES-CCSTTTHHHHHHHHHHHHTTSSCCEE
T ss_pred HHHHHHHhCCcEEEE-----ECCCCCCC--------chHHHHHHCCCEEEEeC-cchhhhhhHHHHHHHHHHHHcCCceE
Confidence 567799999998875 33332 22 34455566899999887 5432 134444444332211111
Q ss_pred hhHHHHHHhhhcCCCCCChhhHHHHHHHHHHHhc--CCcEEEEEcCCchHHHHHHh----cCCCCCEEEEeCch
Q psy6272 404 WEKQVFEDLCALACPPLDPAHSIVIACVNAALKC--QAVAIIVITCSGYSAKLVSK----YRPQCPILAVSSLG 471 (547)
Q Consensus 404 ~~~~~f~~~~~~~~~~~~~~~~ia~aav~~a~~~--~a~aIvv~T~sG~tA~~isk----~RP~~pIiavt~~~ 471 (547)
++..-|. .+ ...+.....+.|+..++ ..++||+..-+|.|+.-+++ ++|.+.|++|-+..
T Consensus 153 ~~p~~~~-------n~-~~~~g~~t~~~Ei~~q~~~~~d~vv~~vGtGGt~~Gi~~~lk~~~~~~~vigVe~~~ 218 (325)
T 1j0a_A 153 VIPPGGA-------SP-IGTLGYVRAVGEIATQSEVKFDSIVVAAGSGGTLAGLSLGLSILNEDIRPVGIAVGR 218 (325)
T ss_dssp EECGGGC-------SH-HHHTHHHHHHHHHHHHCCCCCSEEEEEESSSHHHHHHHHHHHHTTCCCEEEEEECSS
T ss_pred EEcCCCC-------CH-HHHHHHHHHHHHHHHhhCCCCCEEEEeCCchHhHHHHHHHHHhcCCCceEEEEEecC
Confidence 1110000 00 01122234567777776 47999999999999876654 57999999999864
No 148
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=73.24 E-value=21 Score=35.76 Aligned_cols=98 Identities=15% Similarity=0.177 Sum_probs=63.1
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhhHHH-HHHHHHhcCCCceEEEEec---CHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANSIRE-MRGMLEDHVDRVLILAKIE---TLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~di~~-~r~~l~~~~~~i~IiakIE---t~~av~nldeIl~~-~DgImIar 310 (547)
...+++.++.|+|+|++. +--|.++=.+ ++...+..+.++.+|+-+= |.++++.....-+. +||+|+-+
T Consensus 36 ~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 115 (301)
T 1xky_A 36 TKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVA 115 (301)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 345678899999999873 2334444434 4444555566889999874 46777766665555 79998876
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-.+.- .+.+.+...-+.| |.+.+.|+++-
T Consensus 116 P~y~~-~s~~~l~~~f~~v---a~a~~lPiilY 144 (301)
T 1xky_A 116 PYYNK-PSQEGMYQHFKAI---AESTPLPVMLY 144 (301)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HHTCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 54432 2445666555555 45568999874
No 149
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=73.18 E-value=29 Score=34.06 Aligned_cols=122 Identities=14% Similarity=0.072 Sum_probs=75.1
Q ss_pred ChhhHH-HHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHH----------hhHHHHHhh-cCE
Q psy6272 238 ADRDKH-VVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGM----------EYMDEIIME-SDG 305 (547)
Q Consensus 238 t~~D~~-di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av----------~nldeIl~~-~Dg 305 (547)
+..|++ .++.+++.|++.|+++. .-+.... ..+..++.|+.+..++ ...++.++. +|+
T Consensus 39 ~~~di~~~~~~a~~~~~~av~v~~----~~v~~~~------~~~~~liv~~~~~~~~~g~~~~~~~~~~ve~Ai~~Ga~~ 108 (263)
T 1w8s_A 39 DSADPEYILRLARDAGFDGVVFQR----GIAEKYY------DGSVPLILKLNGKTTLYNGEPVSVANCSVEEAVSLGASA 108 (263)
T ss_dssp GGGCHHHHHHHHHHHTCSEEEECH----HHHHHHC------CSSSCEEEECEECCTTCCSSCCCEESSCHHHHHHTTCSE
T ss_pred chhhHHHHHHHHHhhCCCEEEECH----HHHHHhh------cCCCcEEEEEeCCCCcCCCCccchHHHHHHHHHHCCCCE
Confidence 455544 45789999999999883 2333333 2346777777665554 345666655 676
Q ss_pred EEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCC---C---CCcccccccCccchhhH-HHHHHhCccEEe
Q psy6272 306 VVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILP---D---HNVEEYSDVSIGDMNDV-NSIVQDGADVVV 378 (547)
Q Consensus 306 ImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le---~---PtraE~~~~~~~~~~Dv-~nav~~g~D~vm 378 (547)
|-+ |-.++ +-...++...-+++.+.|+++|.|+|+-+. +. . .+..++ ... --+...|+|.+=
T Consensus 109 v~~-~~nig-~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~-~~G~~~~~~~s~~~i--------~~a~~~a~~~GAD~vk 177 (263)
T 1w8s_A 109 VGY-TIYPG-SGFEWKMFEELARIKRDAVKFDLPLVVESF-PRGGKVVNETAPEIV--------AYAARIALELGADAMK 177 (263)
T ss_dssp EEE-EECTT-STTHHHHHHHHHHHHHHHHHHTCCEEEEEC-CCSTTCCCTTCHHHH--------HHHHHHHHHHTCSEEE
T ss_pred EEE-EEecC-CcCHHHHHHHHHHHHHHHHHcCCeEEEEee-CCCCccccCCCHHHH--------HHHHHHHHHcCCCEEE
Confidence 644 33333 223456666667799999999999987432 21 0 022222 332 256778999988
Q ss_pred eC
Q psy6272 379 LT 380 (547)
Q Consensus 379 Ls 380 (547)
.+
T Consensus 178 t~ 179 (263)
T 1w8s_A 178 IK 179 (263)
T ss_dssp EE
T ss_pred Ec
Confidence 87
No 150
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=73.11 E-value=20 Score=35.17 Aligned_cols=99 Identities=12% Similarity=0.102 Sum_probs=63.1
Q ss_pred HHHHHHhcCCCceEEEEe-cCHHHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCC
Q psy6272 270 MRGMLEDHVDRVLILAKI-ETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILP 348 (547)
Q Consensus 270 ~r~~l~~~~~~i~IiakI-Et~~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le 348 (547)
+++.|.+...-+..+.++ -+++.++.+-. .-+|.|+|.--|=.. +.++ ++. .+..+...|.++++
T Consensus 6 ~k~~l~~g~~~~g~~~~~~~~p~~~e~a~~--~g~D~vilDlEhav~--~~~k---~~~-~l~a~~~~~~~~~V------ 71 (261)
T 3qz6_A 6 LKKKLSAGKSVVGTMLNLVYNPDIVRIYAE--AGLDYFIVDCEHAAY--TFRE---INH-LVSVAKNAGVSVLV------ 71 (261)
T ss_dssp HHHHHHTTCCEEEEEESSCCCTTHHHHHHH--TTCSEEEEESSSSCC--CHHH---HHH-HHHHHHHHTCEEEE------
T ss_pred HHHHHHCCCCEEEEEEecCCCHHHHHHHhc--CCcCEEEEeccCCCC--CHHH---HHH-HHHHHhhcCCeEEE------
Confidence 455665433345677777 66666654311 126999997444221 1233 332 45566677888888
Q ss_pred CCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHH
Q psy6272 349 DHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVD 390 (547)
Q Consensus 349 ~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~ 390 (547)
+....+- .|+..++..|+|+||+.|-||+-++-+
T Consensus 72 RVn~~~~--------~di~~~ld~G~~gI~lP~v~saed~~~ 105 (261)
T 3qz6_A 72 RIPQVDR--------AHVQRLLDIGAEGFMIPGVQSAETMRE 105 (261)
T ss_dssp ECSSCCH--------HHHHHHHHHTCCEEEETTCCSHHHHHH
T ss_pred EeCCCCH--------HHHHHHHhcCCCEEEECCcCCHHHHHH
Confidence 4444344 788889999999999999999885433
No 151
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=72.69 E-value=26 Score=35.79 Aligned_cols=124 Identities=14% Similarity=0.073 Sum_probs=64.8
Q ss_pred hhHHHHHHHHHcCCcEEEEcc----------------cCChhhHHHHHHHHHhcCCCceEEEEecC----HHHHhhHHHH
Q psy6272 240 RDKHVVDLIVREAVDIIIMSS----------------VTGANSIREMRGMLEDHVDRVLILAKIET----LLGMEYMDEI 299 (547)
Q Consensus 240 ~D~~di~~~~~~g~d~I~~sf----------------V~sa~di~~~r~~l~~~~~~i~IiakIEt----~~av~nldeI 299 (547)
.-.+..+.+.+.|+|+|-+.+ .++++.+.++.+.+.+.- ++.|..||-. ....++..++
T Consensus 71 ~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v-~~PV~vKiR~g~~~~~~~~~~~~~ 149 (350)
T 3b0p_A 71 SLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV-RVPVTVKMRLGLEGKETYRGLAQS 149 (350)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC-SSCEEEEEESCBTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh-CCceEEEEecCcCccccHHHHHHH
Confidence 334455677789999998875 223444444444444322 5778888731 1111223333
Q ss_pred H----hh-cCEEEEcCCcc--cccCChH--HHHHHHHHHHHHHH-Hc-CCcEEEEcCCCCCCCcccccccCccchhhHHH
Q psy6272 300 I----ME-SDGVVLNRIQL--AVATSVE--VTFLAQKMIAARCN-KQ-GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNS 368 (547)
Q Consensus 300 l----~~-~DgImIargDL--g~e~~~e--~v~~~qk~ii~~c~-~~-gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~n 368 (547)
+ +. +|+|.|.-+.- +.. |.. ..+.+.-..+...+ .. +.|||....+. .. .|+..
T Consensus 150 a~~l~~aG~d~I~V~~r~~~~g~~-g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~------s~--------eda~~ 214 (350)
T 3b0p_A 150 VEAMAEAGVKVFVVHARSALLALS-TKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIR------SL--------EEALF 214 (350)
T ss_dssp HHHHHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTTSEEEEESSCC------SH--------HHHHH
T ss_pred HHHHHHcCCCEEEEecCchhcccC-cccccCCCcccHHHHHHHHHhCCCCeEEEECCcC------CH--------HHHHH
Confidence 3 22 58888864321 111 100 00000112233333 34 79999987643 13 66666
Q ss_pred HHHhCccEEeeC
Q psy6272 369 IVQDGADVVVLT 380 (547)
Q Consensus 369 av~~g~D~vmLs 380 (547)
++. |+|+||+.
T Consensus 215 ~l~-GaD~V~iG 225 (350)
T 3b0p_A 215 HLK-RVDGVMLG 225 (350)
T ss_dssp HHT-TSSEEEEC
T ss_pred HHh-CCCEEEEC
Confidence 775 99999998
No 152
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=72.50 E-value=23 Score=35.15 Aligned_cols=119 Identities=13% Similarity=0.063 Sum_probs=75.4
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcch-HHHHHHHHHHHHHHhhhh-hhhH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQ-AHHRVDILKEILKKTESV-LWEK 406 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Et-a~eaV~~m~~I~~~aE~~-~~~~ 406 (547)
+...|++.|.++.+. .|..... ..+...-..|++.+... ++. -.++.+...++.++-... ++-.
T Consensus 77 ~A~~a~~~G~~~~iv-----~p~~~~~--------~k~~~~~~~GA~v~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~ 142 (316)
T 1y7l_A 77 LAYVAAARGYKITLT-----MPETMSL--------ERKRLLCGLGVNLVLTE-GAKGMKGAIAKAEEIVASDPSRYVMLK 142 (316)
T ss_dssp HHHHHHHHTCCEEEE-----EETTSCH--------HHHHHHHHTTCEEEEEC-GGGHHHHHHHHHHHHHHHCTTTEECCC
T ss_pred HHHHHHHcCCcEEEE-----ECCCCCH--------HHHHHHHHcCCEEEEeC-CCCCHHHHHHHHHHHHHhCCCCEEECC
Confidence 667789999998875 3433223 44555666799998887 553 336666665555443221 1110
Q ss_pred HHHHHhhhcCCCCCChh--hH-HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----cC-CCCCEEEEeCchh
Q psy6272 407 QVFEDLCALACPPLDPA--HS-IVIACVNAALKCQ--AVAIIVITCSGYSAKLVSK----YR-PQCPILAVSSLGY 472 (547)
Q Consensus 407 ~~f~~~~~~~~~~~~~~--~~-ia~aav~~a~~~~--a~aIvv~T~sG~tA~~isk----~R-P~~pIiavt~~~~ 472 (547)
+..++. .+ -...+.|+..+++ .++||+.+-+|.++.-+++ ++ |...|++|.+...
T Consensus 143 -----------~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~~ 207 (316)
T 1y7l_A 143 -----------QFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIKLDFGKQITSVAVEPVES 207 (316)
T ss_dssp -----------TTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHTSCCCCEEEEEEETTS
T ss_pred -----------CCCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCCccccHHHHHHHHHHhCCCCCEEEEEecCCC
Confidence 111221 11 2334577777775 6899999999999876665 34 9999999998653
No 153
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=72.32 E-value=27 Score=34.81 Aligned_cols=98 Identities=14% Similarity=0.171 Sum_probs=61.6
Q ss_pred HHHHHHHHHcCCcEEEEcccC------ChhhHH-HHHHHHHhcCCCceEEEEec---CHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVT------GANSIR-EMRGMLEDHVDRVLILAKIE---TLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~------sa~di~-~~r~~l~~~~~~i~IiakIE---t~~av~nldeIl~~-~DgImIar 310 (547)
...+++.++.|+|+|++.=-. |.++=. -++...+..+.++.||+.+= |.++++.....-+. +|++|+-+
T Consensus 31 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 110 (297)
T 3flu_A 31 RDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVV 110 (297)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECC
Confidence 345678899999999874321 233333 33444455567899999874 56666666555554 69998876
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-...- .+.+.+...-+.| |.+.+.|+++-
T Consensus 111 P~y~~-~~~~~l~~~f~~v---a~a~~lPiilY 139 (297)
T 3flu_A 111 PYYNK-PSQEGIYQHFKTI---AEATSIPMIIY 139 (297)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HHHCCSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 54432 2445665555555 44559999975
No 154
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=72.19 E-value=37 Score=34.12 Aligned_cols=96 Identities=7% Similarity=0.062 Sum_probs=61.7
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCCh-hhHHHHHHHHHhcCCCceEEEEe---cCHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGA-NSIREMRGMLEDHVDRVLILAKI---ETLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa-~di~~~r~~l~~~~~~i~IiakI---Et~~av~nldeIl~~-~DgImIar 310 (547)
...+++.++.|+|+|++. +--|. |-.+-++...+.. .++.||+-+ -|.++++......+. +||+|+-+
T Consensus 32 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~-grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 110 (313)
T 3dz1_A 32 DRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRA-KSMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAP 110 (313)
T ss_dssp HHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHC-TTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHc-CCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 345678899999999874 22233 3334444455555 689999987 355666655555554 79999986
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcC--CcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQG--KPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~g--KPvi~a 343 (547)
-.. -.+.+.+...-+.|. .+.+ .|+++-
T Consensus 111 P~~--~~s~~~l~~~f~~va---~a~~~~lPiilY 140 (313)
T 3dz1_A 111 PPS--LRTDEQITTYFRQAT---EAIGDDVPWVLQ 140 (313)
T ss_dssp CTT--CCSHHHHHHHHHHHH---HHHCTTSCEEEE
T ss_pred CCC--CCCHHHHHHHHHHHH---HhCCCCCcEEEE
Confidence 652 234566666666554 4456 999874
No 155
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=72.17 E-value=26 Score=34.94 Aligned_cols=96 Identities=7% Similarity=0.080 Sum_probs=64.6
Q ss_pred HHHHHHhcCC-CceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCC
Q psy6272 270 MRGMLEDHVD-RVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDIL 347 (547)
Q Consensus 270 ~r~~l~~~~~-~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~L 347 (547)
+++.|.+ |. .+.+++.+.+++.++.+ ... +|.|++..-|-.. ..+.+ +. .+..+...|+|+++=+
T Consensus 30 ~k~~l~~-G~~~~gl~~~~~~p~~~e~a---~~~GaD~v~lDlEh~~~--~~~~~---~~-~l~a~~~~~~~~~VRv--- 96 (287)
T 2v5j_A 30 FKAALKA-GRPQIGLWLGLSSSYSAELL---AGAGFDWLLIDGEHAPN--NVQTV---LT-QLQAIAPYPSQPVVRP--- 96 (287)
T ss_dssp HHHHHHT-TCCEEEEEECSCCHHHHHHH---HTSCCSEEEEESSSSSC--CHHHH---HH-HHHHHTTSSSEEEEEC---
T ss_pred HHHHHHC-CCcEEEEEEECCCHHHHHHH---HhCCCCEEEEeCCCccc--hHHHH---HH-HHHHHHhcCCCEEEEE---
Confidence 6666654 44 57889999988877543 222 6999999888532 12222 22 3445566789998833
Q ss_pred CCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHH
Q psy6272 348 PDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRV 389 (547)
Q Consensus 348 e~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV 389 (547)
.-.+- .|+..++..|+|+||+.|-+|+-|+-
T Consensus 97 ---~~~d~--------~di~~~ld~ga~~ImlP~V~saeea~ 127 (287)
T 2v5j_A 97 ---SWNDP--------VQIKQLLDVGTQTLLVPMVQNADEAR 127 (287)
T ss_dssp ---SSSCH--------HHHHHHHHTTCCEEEESCCCSHHHHH
T ss_pred ---CCCCH--------HHHHHHHhCCCCEEEeCCCCCHHHHH
Confidence 22223 68888888899999999999988733
No 156
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=72.12 E-value=20 Score=35.53 Aligned_cols=121 Identities=17% Similarity=0.174 Sum_probs=71.2
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcch-HHHHHHHHHHHHHHhhhhhhhHH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQ-AHHRVDILKEILKKTESVLWEKQ 407 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Et-a~eaV~~m~~I~~~aE~~~~~~~ 407 (547)
+...|+..|.++.+. .|..... ..+...-..|++.+... ++. -.++++...++..+-.. ++-.+
T Consensus 80 ~A~~a~~~G~~~~iv-----~p~~~~~--------~k~~~~~~~GA~v~~~~-~~~~~~~~~~~a~~l~~~~~~-~~~~~ 144 (308)
T 2egu_A 80 LAMVAAAKGYKAVLV-----MPDTMSL--------ERRNLLRAYGAELVLTP-GAQGMRGAIAKAEELVREHGY-FMPQQ 144 (308)
T ss_dssp HHHHHHHHTCEEEEE-----EESCSCH--------HHHHHHHHTTCEEEEEC-GGGHHHHHHHHHHHHHHHHCC-BCC--
T ss_pred HHHHHHHcCCCEEEE-----ECCCCCH--------HHHHHHHHcCCEEEEEC-CCCCHHHHHHHHHHHHHHCcC-CcCCc
Confidence 667789999998875 3433222 34455566799999888 653 33676666666554322 11111
Q ss_pred HHHHhhhcCCCCCChhhHHHHHHHHHHHhc--CCcEEEEEcCCchHHHHHHh----cCCCCCEEEEeCchh
Q psy6272 408 VFEDLCALACPPLDPAHSIVIACVNAALKC--QAVAIIVITCSGYSAKLVSK----YRPQCPILAVSSLGY 472 (547)
Q Consensus 408 ~f~~~~~~~~~~~~~~~~ia~aav~~a~~~--~a~aIvv~T~sG~tA~~isk----~RP~~pIiavt~~~~ 472 (547)
|.. +.....-....+.|+..++ ..++||+.+-+|.++.-+++ ..|...|++|.+...
T Consensus 145 -~~n-------~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigve~~~~ 207 (308)
T 2egu_A 145 -FKN-------EANPEIHRLTTGKEIVEQMGDQLDAFVAGVGTGGTITGAGKVLREAYPNIKIYAVEPADS 207 (308)
T ss_dssp --------------------CHHHHHHHHHTTCCCEEEEEGGGTHHHHHHHHHHHHHCTTCEEEEEEECC-
T ss_pred -CCC-------hhHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCchhHHHHHHHHHHhCCCCEEEEEEeCCC
Confidence 211 1111001122344555555 37999999999999776654 469999999988654
No 157
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=72.10 E-value=25 Score=34.87 Aligned_cols=119 Identities=13% Similarity=0.139 Sum_probs=74.1
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcch-HHHHHHHHHHHHHHhhhhhhhHH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQ-AHHRVDILKEILKKTESVLWEKQ 407 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Et-a~eaV~~m~~I~~~aE~~~~~~~ 407 (547)
+...|++.|.++.+. .|..... ..+...-..|++.+... ++. -.++.+...++..+-...++.
T Consensus 82 lA~~a~~~G~~~~iv-----~p~~~~~--------~k~~~~~~~Ga~v~~~~-~~~~~~~~~~~a~~l~~~~~~~~~~-- 145 (313)
T 2q3b_A 82 LAMVCAARGYRCVLT-----MPETMSL--------ERRMLLRAYGAELILTP-GADGMSGAIAKAEELAKTDQRYFVP-- 145 (313)
T ss_dssp HHHHHHHHTCEEEEE-----EETTSCH--------HHHHHHHHTTCEEEEEC-GGGHHHHHHHHHHHHHHHCTTEECC--
T ss_pred HHHHHHHcCCcEEEE-----ECCCCCH--------HHHHHHHHCCCEEEEeC-CCCCHHHHHHHHHHHHHhCCCEEeC--
Confidence 567789999998875 3433222 34455566799999888 543 236666555554443211110
Q ss_pred HHHHhhhcCCCCCChhh--H-HHHHHHHHHHhc--CCcEEEEEcCCchHHHHHHh----cCCCCCEEEEeCchh
Q psy6272 408 VFEDLCALACPPLDPAH--S-IVIACVNAALKC--QAVAIIVITCSGYSAKLVSK----YRPQCPILAVSSLGY 472 (547)
Q Consensus 408 ~f~~~~~~~~~~~~~~~--~-ia~aav~~a~~~--~a~aIvv~T~sG~tA~~isk----~RP~~pIiavt~~~~ 472 (547)
.+..++.- . -...+.|+..++ +.++||+.+-+|.++.-+++ ..|...|++|.+...
T Consensus 146 ---------~~~~n~~~~~~~~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vi~ve~~~~ 210 (313)
T 2q3b_A 146 ---------QQFENPANPAIHRVTTAEEVWRDTDGKVDIVVAGVGTGGTITGVAQVIKERKPSARFVAVEPAAS 210 (313)
T ss_dssp ---------CTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTS
T ss_pred ---------CCCCChhhHHHHHHHHHHHHHHHcCCCCCEEEEccCcchhHHHHHHHHHHhCCCCEEEEEeeCCC
Confidence 01112211 1 233366777776 47999999999999876664 469999999988643
No 158
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=71.99 E-value=29 Score=34.70 Aligned_cols=98 Identities=17% Similarity=0.238 Sum_probs=63.0
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhhH-HHHHHHHHhcCCCceEEEEec---CHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANSI-REMRGMLEDHVDRVLILAKIE---TLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~di-~~~r~~l~~~~~~i~IiakIE---t~~av~nldeIl~~-~DgImIar 310 (547)
...+++.++.|+|+|++. +--|.++= +-++...+..+.++.||+.+= |.++++.....-+. +||+|+-+
T Consensus 40 ~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~ 119 (304)
T 3cpr_A 40 REVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVT 119 (304)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 355678899999999873 23344443 334444555567899999874 36677666655554 79998876
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-...- .+.+.+...-+.| |.+.+.|+++-
T Consensus 120 P~y~~-~~~~~l~~~f~~i---a~a~~lPiilY 148 (304)
T 3cpr_A 120 PYYSK-PSQEGLLAHFGAI---AAATEVPICLY 148 (304)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HHHCCSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 54422 2445666555555 45568999874
No 159
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=71.91 E-value=24 Score=35.07 Aligned_cols=98 Identities=13% Similarity=0.144 Sum_probs=62.1
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhhH-HHHHHHHHhcCCCceEEEEecC---HHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANSI-REMRGMLEDHVDRVLILAKIET---LLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~di-~~~r~~l~~~~~~i~IiakIEt---~~av~nldeIl~~-~DgImIar 310 (547)
.+.+++.++.|+|+|++. +--|.++= +-++...+..+.++.+|+.+=+ .++++....--+. +||+|+.+
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 103 (292)
T 2vc6_A 24 HDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVS 103 (292)
T ss_dssp HHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcC
Confidence 355678899999998853 23333333 4444445555667889998743 6666666555554 69998876
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-.+.- .+.+.+...-+.| |.+.+.|+++-
T Consensus 104 P~y~~-~s~~~l~~~f~~i---a~a~~lPiilY 132 (292)
T 2vc6_A 104 PYYNK-PTQEGIYQHFKAI---DAASTIPIIVY 132 (292)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 54432 2445665555555 45568999973
No 160
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=71.68 E-value=15 Score=37.25 Aligned_cols=118 Identities=8% Similarity=0.042 Sum_probs=75.5
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcch-HHHHHHHHHHHHHHhhhh-hhhH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQ-AHHRVDILKEILKKTESV-LWEK 406 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Et-a~eaV~~m~~I~~~aE~~-~~~~ 406 (547)
+...|+..|.++.+. .|..... .-+...-..|++.+... ++. -.++.+...++.++-... ++-.
T Consensus 93 lA~aa~~~G~~~~iv-----~p~~~~~--------~k~~~~~~~GA~V~~~~-~~~~~~~~~~~a~~~~~~~~~~y~~~~ 158 (343)
T 2pqm_A 93 LCQAGAVFGYRVNIA-----MPSTMSV--------ERQMIMKAFGAELILTE-GKKGMPGAIEEVNKMIKENPGKYFVAN 158 (343)
T ss_dssp HHHHHHHHTCCEEEE-----EETTSCH--------HHHHHHHHTTCEEEEEC-GGGHHHHHHHHHHHHHHHSTTTEEECC
T ss_pred HHHHHHHcCCCEEEE-----ECCCCCH--------HHHHHHHHCCCEEEEEC-CCCCHHHHHHHHHHHHHhCCCcEEECC
Confidence 667789999999885 3443323 44555666799999987 643 336666665555443321 1100
Q ss_pred HHHHHhhhcCCCCCChhh--H-HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----cCCCCCEEEEeCchh
Q psy6272 407 QVFEDLCALACPPLDPAH--S-IVIACVNAALKCQ--AVAIIVITCSGYSAKLVSK----YRPQCPILAVSSLGY 472 (547)
Q Consensus 407 ~~f~~~~~~~~~~~~~~~--~-ia~aav~~a~~~~--a~aIvv~T~sG~tA~~isk----~RP~~pIiavt~~~~ 472 (547)
+..++.. + ....+ |+..+++ .++||+.+-+|.++.-+++ .+|...|++|.+...
T Consensus 159 -----------~~~n~~n~~~g~~t~~-Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigVe~~~~ 221 (343)
T 2pqm_A 159 -----------QFGNPDNTAAHHYTAN-EIWEDTDGEVDIVVSAVGTSGTVIGVAEKLKEKKKGIKIIAVEPEES 221 (343)
T ss_dssp -----------TTTCHHHHHHHHHHHH-HHHHHTTTCEEEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGGG
T ss_pred -----------CCCChhHHHHHHHHHH-HHHHHcCCCCCEEEEecCCchhHHHHHHHHHHcCCCCEEEEEecCCC
Confidence 1112211 1 23344 8887775 6999999999999876664 479999999998654
No 161
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=70.71 E-value=21 Score=36.06 Aligned_cols=98 Identities=11% Similarity=0.082 Sum_probs=62.7
Q ss_pred HHHHHHHHHcCCcEEEEcc------cCChhhH-HHHHHHHHhcCCCceEEEEec---CHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMSS------VTGANSI-REMRGMLEDHVDRVLILAKIE---TLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sf------V~sa~di-~~~r~~l~~~~~~i~IiakIE---t~~av~nldeIl~~-~DgImIar 310 (547)
...+++.++.|+|+|++.= --|.++- +-++...+..+.++.||+.+= |.++++.....-+. +|++|+-+
T Consensus 48 ~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~ 127 (315)
T 3na8_A 48 GRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLP 127 (315)
T ss_dssp HHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECC
Confidence 3456788899999988632 2233333 334444555567889999875 56666666655555 79999986
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-...- .+.+.+...-+.| |.+.+.|+++-
T Consensus 128 P~y~~-~s~~~l~~~f~~v---a~a~~lPiilY 156 (315)
T 3na8_A 128 ISYWK-LNEAEVFQHYRAV---GEAIGVPVMLY 156 (315)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhCCCcEEEE
Confidence 65432 3456666665555 45568999874
No 162
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=70.59 E-value=36 Score=33.74 Aligned_cols=98 Identities=15% Similarity=0.194 Sum_probs=61.7
Q ss_pred HHHHHHHHHcCCcEEEEcccC------ChhhHHH-HHHHHHhcCCCceEEEEec---CHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVT------GANSIRE-MRGMLEDHVDRVLILAKIE---TLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~------sa~di~~-~r~~l~~~~~~i~IiakIE---t~~av~nldeIl~~-~DgImIar 310 (547)
...+++.++.|+|+|++.=-. |.++=.+ ++...+..+.++.+|+.+= |.++++.....-+. +|++|+-+
T Consensus 25 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 25 EKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDLGADAALLVT 104 (291)
T ss_dssp HHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 445678899999998764322 2233333 3334455567789999874 56666655555554 79999876
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-.+. ..+.+.+...-+.|. .+.+.|+++-
T Consensus 105 P~y~-~~~~~~l~~~f~~ia---~a~~lPiilY 133 (291)
T 3tak_A 105 PYYN-KPTQEGLYQHYKAIA---EAVELPLILY 133 (291)
T ss_dssp CCSS-CCCHHHHHHHHHHHH---HHCCSCEEEE
T ss_pred CCCC-CCCHHHHHHHHHHHH---HhcCCCEEEE
Confidence 5543 224466666656554 4558999975
No 163
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=70.29 E-value=46 Score=36.08 Aligned_cols=116 Identities=16% Similarity=0.081 Sum_probs=73.8
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHhhhhhhhHHH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQV 408 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~aE~~~~~~~~ 408 (547)
+...|++.|.|+.+. .|...-. .-+...-..|++.++.. .+-.+|.+...+++++-...+
T Consensus 94 vA~aa~~lGi~~~Iv-----mP~~~p~--------~Kv~~~r~~GAeVvlv~--~~~dda~~~a~ela~e~g~~~----- 153 (514)
T 1tdj_A 94 VAFSSARLGVKALIV-----MPTATAD--------IKVDAVRGFGGEVLLHG--ANFDEAKAKAIELSQQQGFTW----- 153 (514)
T ss_dssp HHHHHHHTTCCEEEE-----CCSSCCH--------HHHHHHHHHSCEEECCC--SSHHHHHHHHHHHHHHHCCEE-----
T ss_pred HHHHHHHcCCcEEEE-----ECCCCCH--------HHHHHHHHCCCEEEEEC--CCHHHHHHHHHHHHHhcCCEe-----
Confidence 567788999999885 4443223 44455566799877754 455577666555554422111
Q ss_pred HHHhhhcCCCCCChhh--HHHHHHHHHHHhcC-CcEEEEEcCCchHHHHHHh----cCCCCCEEEEeCch
Q psy6272 409 FEDLCALACPPLDPAH--SIVIACVNAALKCQ-AVAIIVITCSGYSAKLVSK----YRPQCPILAVSSLG 471 (547)
Q Consensus 409 f~~~~~~~~~~~~~~~--~ia~aav~~a~~~~-a~aIvv~T~sG~tA~~isk----~RP~~pIiavt~~~ 471 (547)
..+..++.- .-..-+.|+..++. .++|+|.+-+|.++--+++ .+|.+.|++|.+..
T Consensus 154 -------v~pfdnp~~iaGqgTig~EI~eQl~~~D~vvvpvGgGGliaGia~~lk~~~P~~kVIgVep~~ 216 (514)
T 1tdj_A 154 -------VPPFDHPMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEAED 216 (514)
T ss_dssp -------CCSSCCHHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETT
T ss_pred -------eCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEccCcHHHHHHHHHHHHHhCCCCEEEEEeccC
Confidence 111112221 12223667777764 7999999999998776665 47999999999953
No 164
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=70.27 E-value=26 Score=36.00 Aligned_cols=127 Identities=12% Similarity=0.016 Sum_probs=69.1
Q ss_pred CCChhhHHHH--------HHHHHcCCcEEEEccc-------------CChh---------hHH---HHHHHHHh-cCCCc
Q psy6272 236 VIADRDKHVV--------DLIVREAVDIIIMSSV-------------TGAN---------SIR---EMRGMLED-HVDRV 281 (547)
Q Consensus 236 ~lt~~D~~di--------~~~~~~g~d~I~~sfV-------------~sa~---------di~---~~r~~l~~-~~~~i 281 (547)
.||..|++.+ +.|.+.|+|+|=+-.- +... ..+ ++.+.+.+ .+.+.
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~ 226 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENL 226 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCc
Confidence 5788888776 4677899999987542 2211 122 22222322 35567
Q ss_pred eEEEEecCH-------HHHhhHHHHHhh-----cCEEEEcCCccccc--C--Ch-HHHHHHHHHHHHHHHHcCCcEEEEc
Q psy6272 282 LILAKIETL-------LGMEYMDEIIME-----SDGVVLNRIQLAVA--T--SV-EVTFLAQKMIAARCNKQGKPFLVVG 344 (547)
Q Consensus 282 ~IiakIEt~-------~av~nldeIl~~-----~DgImIargDLg~e--~--~~-e~v~~~qk~ii~~c~~~gKPvi~aT 344 (547)
.|..||--- ..++..-++++. .|.|-+.-|...-. . +. ..+..+ +.+ .+..++||+...
T Consensus 227 pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~-~~i---r~~~~iPVi~~G 302 (363)
T 3l5l_A 227 PLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIA-ERV---RREAKLPVTSAW 302 (363)
T ss_dssp CEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHH-HHH---HHHHTCCEEECS
T ss_pred eEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHH-HHH---HHHcCCcEEEeC
Confidence 788888321 123333333333 58887765543211 1 11 112211 112 223489999865
Q ss_pred CCCCCCCcccccccCccchhhHHHHHHhC-ccEEeeC
Q psy6272 345 DILPDHNVEEYSDVSIGDMNDVNSIVQDG-ADVVVLT 380 (547)
Q Consensus 345 q~Le~PtraE~~~~~~~~~~Dv~nav~~g-~D~vmLs 380 (547)
.+- + . .++..++..| +|.|++.
T Consensus 303 gI~---s---~--------e~a~~~l~~G~aD~V~iG 325 (363)
T 3l5l_A 303 GFG---T---P--------QLAEAALQANQLDLVSVG 325 (363)
T ss_dssp STT---S---H--------HHHHHHHHTTSCSEEECC
T ss_pred CCC---C---H--------HHHHHHHHCCCccEEEec
Confidence 532 1 2 5556688888 9999998
No 165
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=70.11 E-value=11 Score=39.94 Aligned_cols=101 Identities=15% Similarity=0.125 Sum_probs=60.3
Q ss_pred CCCChhhHHHHH-HHHHcCCcEEEEcccCC---------------------hhhHHHHHHHHHhcCCCceEEEE--ecCH
Q psy6272 235 PVIADRDKHVVD-LIVREAVDIIIMSSVTG---------------------ANSIREMRGMLEDHVDRVLILAK--IETL 290 (547)
Q Consensus 235 p~lt~~D~~di~-~~~~~g~d~I~~sfV~s---------------------a~di~~~r~~l~~~~~~i~Iiak--IEt~ 290 (547)
|.+++.|..++. .+.+.|+|+|+++.-.. +..++.++.+-+..+.++.||+- |.|.
T Consensus 278 pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~ 357 (415)
T 3i65_A 278 PDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSG 357 (415)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSH
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCH
Confidence 556776766664 56789999999986321 11123333333333457888873 5554
Q ss_pred HHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCc
Q psy6272 291 LGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKP 339 (547)
Q Consensus 291 ~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKP 339 (547)
+-+... |..=+|+|+|+|+=+.- |+.-+..+.+.+-....+.|..
T Consensus 358 eDa~e~--l~aGAd~VqIgra~l~~--GP~~~~~i~~~L~~~l~~~G~~ 402 (415)
T 3i65_A 358 LDALEK--IEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGYY 402 (415)
T ss_dssp HHHHHH--HHHTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHH--HHcCCCEEEEcHHHHhc--CHHHHHHHHHHHHHHHHHcCCC
Confidence 433222 23338999999986632 3444556666666666776643
No 166
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=69.97 E-value=20 Score=37.35 Aligned_cols=98 Identities=16% Similarity=0.142 Sum_probs=52.4
Q ss_pred ChhhHHHHHHHHHhcCCCceEEEE-ecCHHHHhhHHHHHhh-cCEEEEcCCccc--ccCChHHHHHHHHHHHHHHHHcCC
Q psy6272 263 GANSIREMRGMLEDHVDRVLILAK-IETLLGMEYMDEIIME-SDGVVLNRIQLA--VATSVEVTFLAQKMIAARCNKQGK 338 (547)
Q Consensus 263 sa~di~~~r~~l~~~~~~i~Iiak-IEt~~av~nldeIl~~-~DgImIargDLg--~e~~~e~v~~~qk~ii~~c~~~gK 338 (547)
+.++++.+++.. +..++.| +-+ .+......+. +|+|.|. |--| ...+...+..+ .++.+.. .-.+
T Consensus 240 ~~~~i~~lr~~~-----~~PvivKgv~~---~e~A~~a~~aGad~I~vs-~~ggr~~~~g~~~~~~l-~~v~~av-~~~i 308 (392)
T 2nzl_A 240 SWEDIKWLRRLT-----SLPIVAKGILR---GDDAREAVKHGLNGILVS-NHGARQLDGVPATIDVL-PEIVEAV-EGKV 308 (392)
T ss_dssp CHHHHHHHC--C-----CSCEEEEEECC---HHHHHHHHHTTCCEEEEC-CGGGTSSTTCCCHHHHH-HHHHHHH-TTSS
T ss_pred HHHHHHHHHHhh-----CCCEEEEecCC---HHHHHHHHHcCCCEEEeC-CCCCCcCCCCcChHHHH-HHHHHHc-CCCC
Confidence 345555555432 4677877 322 2333333333 6999993 1111 12232222111 1222222 1258
Q ss_pred cEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHH
Q psy6272 339 PFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAH 386 (547)
Q Consensus 339 Pvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~ 386 (547)
|||....+- -- .|+..++..|||+||+. .....
T Consensus 309 pVia~GGI~------~g--------~Dv~kalalGAd~V~iG-r~~l~ 341 (392)
T 2nzl_A 309 EVFLDGGVR------KG--------TDVLKALALGAKAVFVG-RPIVW 341 (392)
T ss_dssp EEEECSSCC------SH--------HHHHHHHHTTCSEEEEC-HHHHH
T ss_pred EEEEECCCC------CH--------HHHHHHHHhCCCeeEEC-HHHHH
Confidence 999877643 24 89999999999999998 55443
No 167
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=69.88 E-value=29 Score=34.80 Aligned_cols=98 Identities=12% Similarity=0.154 Sum_probs=62.9
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhhHHH-HHHHHHhcCCCceEEEEecC---HHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANSIRE-MRGMLEDHVDRVLILAKIET---LLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~di~~-~r~~l~~~~~~i~IiakIEt---~~av~nldeIl~~-~DgImIar 310 (547)
...+++.++.|+|+|++. +--|.++=.+ ++...+..+.++.||+-+=+ .++++.....-+. +||+|+-+
T Consensus 36 ~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~ 115 (306)
T 1o5k_A 36 ERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVT 115 (306)
T ss_dssp HHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECC
Confidence 345678899999999873 3334444444 44445555668899998743 6677666655554 79998876
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-.+.- .+.+.+...-+.| |.+.+.|+++-
T Consensus 116 P~y~~-~s~~~l~~~f~~v---a~a~~lPiilY 144 (306)
T 1o5k_A 116 PYYNK-PTQEGLYQHYKYI---SERTDLGIVVY 144 (306)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HTTCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 55432 2445666555555 45568999874
No 168
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=69.70 E-value=46 Score=34.37 Aligned_cols=51 Identities=16% Similarity=0.152 Sum_probs=35.1
Q ss_pred CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHH-------HHH-HHHHHHHHHhhhh
Q psy6272 337 GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAH-------HRV-DILKEILKKTESV 402 (547)
Q Consensus 337 gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~-------eaV-~~m~~I~~~aE~~ 402 (547)
..|||....+- -- .|+..++..|||+||+. ..... +.| +.+..+.++.+..
T Consensus 272 ~ipVia~GGI~------~g--------~Dv~kaLalGA~aV~iG-r~~l~~l~~~G~~gv~~~l~~l~~el~~~ 330 (352)
T 3sgz_A 272 KIEVYMDGGVR------TG--------TDVLKALALGARCIFLG-RPILWGLACKGEDGVKEVLDILTAELHRC 330 (352)
T ss_dssp SSEEEEESSCC------SH--------HHHHHHHHTTCSEEEES-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCC------CH--------HHHHHHHHcCCCEEEEC-HHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 68999987743 24 89999999999999998 55443 222 3455555555543
No 169
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=69.61 E-value=25 Score=35.37 Aligned_cols=102 Identities=13% Similarity=0.129 Sum_probs=62.8
Q ss_pred HHHHHHHHcCCcEEEEc------ccCChhhH-HHHHHHHHhcCCCceEEEEec--CHHHHhhHHHHHhh-cCEEEEcCCc
Q psy6272 243 HVVDLIVREAVDIIIMS------SVTGANSI-REMRGMLEDHVDRVLILAKIE--TLLGMEYMDEIIME-SDGVVLNRIQ 312 (547)
Q Consensus 243 ~di~~~~~~g~d~I~~s------fV~sa~di-~~~r~~l~~~~~~i~IiakIE--t~~av~nldeIl~~-~DgImIargD 312 (547)
..+++.++.|+|+|++. +--|.++= +-++...+..+.++.||+.+= |.++++.....-+. +||+|+-+-.
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~Gadavlv~~P~ 116 (314)
T 3d0c_A 37 DNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDSGADCVMIHQPV 116 (314)
T ss_dssp HHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHcCCCEEEECCCC
Confidence 45678899999998863 22333333 444444555567899999885 44555544444433 6999987655
Q ss_pred ccccCChHHHHHHHHHHHHHHHHcCCcEEEE--cCCCC
Q psy6272 313 LAVATSVEVTFLAQKMIAARCNKQGKPFLVV--GDILP 348 (547)
Q Consensus 313 Lg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a--Tq~Le 348 (547)
+.- .+.+.+...-+.| |.+.+.|+++- |.+|.
T Consensus 117 y~~-~s~~~l~~~f~~v---a~a~~lPiilYn~tg~l~ 150 (314)
T 3d0c_A 117 HPY-ITDAGAVEYYRNI---IEALDAPSIIYFKDAHLS 150 (314)
T ss_dssp CSC-CCHHHHHHHHHHH---HHHSSSCEEEEECCTTSC
T ss_pred CCC-CCHHHHHHHHHHH---HHhCCCCEEEEeCCCCcC
Confidence 432 2445665555555 45668999884 44443
No 170
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=69.11 E-value=30 Score=34.90 Aligned_cols=99 Identities=11% Similarity=0.099 Sum_probs=61.7
Q ss_pred HHHHHHHHHcCCcEEEEcc-------cCChhhHHHHHHHHHhcCCCceEEEEec---CHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMSS-------VTGANSIREMRGMLEDHVDRVLILAKIE---TLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sf-------V~sa~di~~~r~~l~~~~~~i~IiakIE---t~~av~nldeIl~~-~DgImIar 310 (547)
...+++.++.|+|+|++.= ....|-.+-++...+..+.++.||+.+= |.++++.....-+. +||+|+-+
T Consensus 35 ~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 114 (318)
T 3qfe_A 35 ERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLP 114 (318)
T ss_dssp HHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 3456788999999988742 2223333444444555567899999863 45666655555544 79999987
Q ss_pred Cc-ccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQ-LAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gD-Lg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-. +.--...+.+...-+.|.+ +.+.|+++-
T Consensus 115 P~y~~kp~~~~~l~~~f~~ia~---a~~lPiilY 145 (318)
T 3qfe_A 115 PAYFGKATTPPVIKSFFDDVSC---QSPLPVVIY 145 (318)
T ss_dssp CCC---CCCHHHHHHHHHHHHH---HCSSCEEEE
T ss_pred CcccCCCCCHHHHHHHHHHHHh---hCCCCEEEE
Confidence 63 3322345666666665544 558999874
No 171
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=68.94 E-value=27 Score=33.53 Aligned_cols=121 Identities=18% Similarity=0.139 Sum_probs=60.9
Q ss_pred hHHHHHHHHHcCCcEEEEcccCChh--hHHHHHHHHHhcC--C-Cce--EEE-------EecCHH--------HHhhHHH
Q psy6272 241 DKHVVDLIVREAVDIIIMSSVTGAN--SIREMRGMLEDHV--D-RVL--ILA-------KIETLL--------GMEYMDE 298 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sfV~sa~--di~~~r~~l~~~~--~-~i~--Iia-------kIEt~~--------av~nlde 298 (547)
+.+++..+++.|+|+|.+.-.---. +...+++++...+ . .+. +=+ .+++.. ..+-+..
T Consensus 85 ~~~~i~~~~~~Gad~v~lg~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~ 164 (266)
T 2w6r_A 85 KMEHFLEAFLAGADKALAASVFHFREIDMRELKEYLKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVE 164 (266)
T ss_dssp STHHHHHHHHHTCSEEECCCCC------CHHHHHHCC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHH
T ss_pred CHHHHHHHHHcCCcHhhhhHHHHhCCCCHHHHHHHHHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHH
Confidence 3556788888999999987432101 4555666554444 2 221 111 122211 1222333
Q ss_pred HHhh-cCEEEEcCCc-ccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccE
Q psy6272 299 IIME-SDGVVLNRIQ-LAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADV 376 (547)
Q Consensus 299 Il~~-~DgImIargD-Lg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~ 376 (547)
+... ++.|++...+ =+...|+ .+. .+-+.++..+.|++....+- .. .|+..+...|+|+
T Consensus 165 ~~~~G~~~i~~t~~~~~g~~~g~-~~~----~i~~l~~~~~ipvia~GGI~------~~--------ed~~~~~~~Gadg 225 (266)
T 2w6r_A 165 VEKRGAGEILLTSIDRDGTKSGY-DTE----MIRFVRPLTTLPIIASGGAG------KM--------EHFLEAFLAGADA 225 (266)
T ss_dssp HHHTTCSEEEEEETTTTTTCSCC-CHH----HHHHHGGGCCSCEEEESCCC------SH--------HHHHHHHHHTCSE
T ss_pred HHHcCCCEEEEEeecCCCCcCCC-CHH----HHHHHHHHcCCCEEEeCCCC------CH--------HHHHHHHHcCCHH
Confidence 3333 5777773211 1122222 111 11122344589999977632 23 6777777779999
Q ss_pred EeeC
Q psy6272 377 VVLT 380 (547)
Q Consensus 377 vmLs 380 (547)
+++.
T Consensus 226 v~vg 229 (266)
T 2w6r_A 226 ALAA 229 (266)
T ss_dssp EEES
T ss_pred HHcc
Confidence 9997
No 172
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=68.72 E-value=55 Score=33.75 Aligned_cols=115 Identities=9% Similarity=0.178 Sum_probs=81.7
Q ss_pred hhHHHHHHHHHcCCcEEEEc--------------cc----------------CChhhHHHHHHHHHhcCCCceEEEEecC
Q psy6272 240 RDKHVVDLIVREAVDIIIMS--------------SV----------------TGANSIREMRGMLEDHVDRVLILAKIET 289 (547)
Q Consensus 240 ~D~~di~~~~~~g~d~I~~s--------------fV----------------~sa~di~~~r~~l~~~~~~i~IiakIEt 289 (547)
.-++-++.|.+.|+|.|=+- |- -+.++.+.++++..+. .+.+++-+=+
T Consensus 36 ~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~--Gi~~~st~~d 113 (349)
T 2wqp_A 36 TAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESK--GMIFISTLFS 113 (349)
T ss_dssp HHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHT--TCEEEEEECS
T ss_pred HHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHh--CCeEEEeeCC
Confidence 34666788999999998762 32 1335666666666654 5788888878
Q ss_pred HHHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHH
Q psy6272 290 LLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSI 369 (547)
Q Consensus 290 ~~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~na 369 (547)
.++++-+++. -+|.+=||-+|+.- ++ +++.+-+.|||||+.|.| -|-+|+ ...+.+
T Consensus 114 ~~svd~l~~~--~v~~~KI~S~~~~n------~~-----LL~~va~~gkPviLstGm---at~~Ei--------~~Ave~ 169 (349)
T 2wqp_A 114 RAAALRLQRM--DIPAYKIGSGECNN------YP-----LIKLVASFGKPIILSTGM---NSIESI--------KKSVEI 169 (349)
T ss_dssp HHHHHHHHHH--TCSCEEECGGGTTC------HH-----HHHHHHTTCSCEEEECTT---CCHHHH--------HHHHHH
T ss_pred HHHHHHHHhc--CCCEEEECcccccC------HH-----HHHHHHhcCCeEEEECCC---CCHHHH--------HHHHHH
Confidence 8887766552 16999999888873 33 344566789999999996 377788 777777
Q ss_pred HH-hCccEEeeC
Q psy6272 370 VQ-DGADVVVLT 380 (547)
Q Consensus 370 v~-~g~D~vmLs 380 (547)
+. .|.+.++|-
T Consensus 170 i~~~G~~iiLlh 181 (349)
T 2wqp_A 170 IREAGVPYALLH 181 (349)
T ss_dssp HHHHTCCEEEEE
T ss_pred HHHcCCCEEEEe
Confidence 76 466777773
No 173
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=68.72 E-value=35 Score=35.18 Aligned_cols=99 Identities=20% Similarity=0.211 Sum_probs=54.1
Q ss_pred ChhhHHHHHHHHHhcCCCceEEEE-ecCHHHHhhHHHHHhh-cCEEEEcC-CcccccCChHHHHHHHHHHHHHHHHcCCc
Q psy6272 263 GANSIREMRGMLEDHVDRVLILAK-IETLLGMEYMDEIIME-SDGVVLNR-IQLAVATSVEVTFLAQKMIAARCNKQGKP 339 (547)
Q Consensus 263 sa~di~~~r~~l~~~~~~i~Iiak-IEt~~av~nldeIl~~-~DgImIar-gDLg~e~~~e~v~~~qk~ii~~c~~~gKP 339 (547)
+.++++.+|+.. +..++.| +-+. +......+. +|+|.|.- |-=....+...+.. -.++.+.+ ...+|
T Consensus 217 ~~~~i~~lr~~~-----~~PvivK~v~~~---e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~-l~~v~~~v-~~~ip 286 (368)
T 2nli_A 217 SPRDIEEIAGHS-----GLPVFVKGIQHP---EDADMAIKRGASGIWVSNHGARQLYEAPGSFDT-LPAIAERV-NKRVP 286 (368)
T ss_dssp CHHHHHHHHHHS-----SSCEEEEEECSH---HHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHH-HHHHHHHH-TTSSC
T ss_pred hHHHHHHHHHHc-----CCCEEEEcCCCH---HHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHH-HHHHHHHh-CCCCe
Confidence 456666666643 4567777 3332 222222333 69999841 10001223322211 12222222 12689
Q ss_pred EEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHH
Q psy6272 340 FLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAH 386 (547)
Q Consensus 340 vi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~ 386 (547)
||....+- .- .|+..++..|||+||+. .....
T Consensus 287 Via~GGI~------~g--------~D~~kalalGAd~V~iG-r~~l~ 318 (368)
T 2nli_A 287 IVFDSGVR------RG--------EHVAKALASGADVVALG-RPVLF 318 (368)
T ss_dssp EEECSSCC------SH--------HHHHHHHHTTCSEEEEC-HHHHH
T ss_pred EEEECCCC------CH--------HHHHHHHHcCCCEEEEC-HHHHH
Confidence 99877643 24 89999999999999998 54433
No 174
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=68.61 E-value=25 Score=36.19 Aligned_cols=117 Identities=16% Similarity=0.150 Sum_probs=73.0
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHhhhhhhhHHH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQV 408 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~aE~~~~~~~~ 408 (547)
+...|++.|.++.+. .|..... ..+...-..|++.+... + +-.++.+...++..+.+..++-
T Consensus 108 lA~aa~~~G~~~~iv-----~p~~~~~--------~k~~~~~~~GA~V~~~~-~-~~~~a~~~a~~l~~~~~~~~~v--- 169 (372)
T 1p5j_A 108 AAYAARQLGVPATIV-----VPGTTPA--------LTIERLKNEGATCKVVG-E-LLDEAFELAKALAKNNPGWVYI--- 169 (372)
T ss_dssp HHHHHHHHTCCEEEE-----ECTTCCH--------HHHHHHHHTTCEEEECC-S-CHHHHHHHHHHHHHHSTTEEEC---
T ss_pred HHHHHHHcCCcEEEE-----ECCCCCH--------HHHHHHHhcCCEEEEEC-C-CHHHHHHHHHHHHHhcCCcEEe---
Confidence 566789999998875 3443323 44455566799988766 4 4446666666655442221111
Q ss_pred HHHhhhcCCCCCCh--hhHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----cC-CCCCEEEEeCch
Q psy6272 409 FEDLCALACPPLDP--AHSIVIACVNAALKCQ--AVAIIVITCSGYSAKLVSK----YR-PQCPILAVSSLG 471 (547)
Q Consensus 409 f~~~~~~~~~~~~~--~~~ia~aav~~a~~~~--a~aIvv~T~sG~tA~~isk----~R-P~~pIiavt~~~ 471 (547)
.+..++ ...-...+.|+..++. .++||+.+-+|.++--+++ +. |.+.|++|.+..
T Consensus 170 --------~~~~n~~~~~G~~t~~~Ei~~ql~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~p~~~vigVe~~~ 233 (372)
T 1p5j_A 170 --------PPFDDPLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQECGWGDVPVIAMETFG 233 (372)
T ss_dssp --------CSSCCHHHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETT
T ss_pred --------CCCCCHHHHhhHHHHHHHHHHHcCCCCCEEEEecCCchHHHHHHHHHHHhCCCCceEEEEecCC
Confidence 011122 2222345567777764 6899999999999876654 33 889999999863
No 175
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=68.51 E-value=54 Score=33.00 Aligned_cols=137 Identities=14% Similarity=0.183 Sum_probs=81.5
Q ss_pred hhHHHHHHHHHcCCcEEEEcc-------cCChhhHHHHHHHHHhcCCCceEEEEecCHHH------------HhhHHHHH
Q psy6272 240 RDKHVVDLIVREAVDIIIMSS-------VTGANSIREMRGMLEDHVDRVLILAKIETLLG------------MEYMDEII 300 (547)
Q Consensus 240 ~D~~di~~~~~~g~d~I~~sf-------V~sa~di~~~r~~l~~~~~~i~IiakIEt~~a------------v~nldeIl 300 (547)
.+.+++..|.+.|||-|=+-- .-|..-++.++++ .++.|.++|.-+.| .+.++...
T Consensus 47 ~s~~~a~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~-----~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~ 121 (287)
T 3iwp_A 47 DSVESAVNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQS-----VQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAK 121 (287)
T ss_dssp SSHHHHHHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTT-----CCSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHh-----cCCCeEEEEecCCCCcccCHHHHHHHHHHHHHHH
Confidence 357788999999999987751 1144566666553 25889999987776 23555555
Q ss_pred hh-cCEEEEcC--CcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEE
Q psy6272 301 ME-SDGVVLNR--IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVV 377 (547)
Q Consensus 301 ~~-~DgImIar--gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~v 377 (547)
++ +|||.+|- -|= ++..+.+ +++++.| .+.+|-+. +...++.|+ ..-+-..+..|+|-|
T Consensus 122 ~~GAdGvVfG~L~~dg--~iD~~~~----~~Li~~a--~~l~vTFH------RAFD~~~d~----~~Ale~Li~lGvdrI 183 (287)
T 3iwp_A 122 LYGADGLVFGALTEDG--HIDKELC----MSLMAIC--RPLPVTFH------RAFDMVHDP----MAALETLLTLGFERV 183 (287)
T ss_dssp HTTCSEEEECCBCTTS--CBCHHHH----HHHHHHH--TTSCEEEC------GGGGGCSCH----HHHHHHHHHHTCSEE
T ss_pred HcCCCEEEEeeeCCCC--CcCHHHH----HHHHHHc--CCCcEEEE------CchhccCCH----HHHHHHHHHcCCCEE
Confidence 55 79999994 332 2333333 3355555 35566552 221122111 122223344499999
Q ss_pred eeCCcc--hHHHHHHHHHHHHHHhh
Q psy6272 378 VLTQSE--QAHHRVDILKEILKKTE 400 (547)
Q Consensus 378 mLsk~E--ta~eaV~~m~~I~~~aE 400 (547)
+.| |- ++.+.+..|++++..+.
T Consensus 184 LTS-G~~~~a~~Gl~~Lk~Lv~~a~ 207 (287)
T 3iwp_A 184 LTS-GCDSSALEGLPLIKRLIEQAK 207 (287)
T ss_dssp EEC-TTSSSTTTTHHHHHHHHHHHT
T ss_pred ECC-CCCCChHHhHHHHHHHHHHhC
Confidence 999 63 34477777777766554
No 176
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=68.48 E-value=65 Score=32.59 Aligned_cols=116 Identities=16% Similarity=0.205 Sum_probs=73.0
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHhhhhhhhHHH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQV 408 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~aE~~~~~~~~ 408 (547)
+...|++.|.|+.+. .|..... .-+...-..|++.++.. + +..++.+...+++++-...+.+
T Consensus 91 ~A~aa~~~G~~~~iv-----~p~~~~~--------~k~~~~~~~GA~V~~v~-~-~~~~~~~~a~~l~~~~~~~~i~--- 152 (346)
T 3l6b_A 91 LTYAAKLEGIPAYIV-----VPQTAPD--------CKKLAIQAYGASIVYCE-P-SDESRENVAKRVTEETEGIMVH--- 152 (346)
T ss_dssp HHHHHHHTTCCEEEE-----EETTSCH--------HHHHHHHHTTCEEEEEC-S-SHHHHHHHHHHHHHHHTCEECC---
T ss_pred HHHHHHHhCCCEEEE-----ECCCCCH--------HHHHHHHHCCCEEEEEC-C-CHHHHHHHHHHHHHhcCCEEEC---
Confidence 567799999998875 3433222 34455566799988886 4 3346666666665543321110
Q ss_pred HHHhhhcCCCCCChh--hHHHHHHHHHHHhc-CCcEEEEEcCCchHHHHHHh----cCCCCCEEEEeCch
Q psy6272 409 FEDLCALACPPLDPA--HSIVIACVNAALKC-QAVAIIVITCSGYSAKLVSK----YRPQCPILAVSSLG 471 (547)
Q Consensus 409 f~~~~~~~~~~~~~~--~~ia~aav~~a~~~-~a~aIvv~T~sG~tA~~isk----~RP~~pIiavt~~~ 471 (547)
+..++. ..-...+.|+..++ ..++||+.+-+|.+.--+++ .+|.+.|++|-+..
T Consensus 153 ---------~~~np~~~~g~~t~~~Ei~~q~~~~d~vvv~vG~GG~~aGi~~~~k~~~p~~~vigVe~~~ 213 (346)
T 3l6b_A 153 ---------PNQEPAVIAGQGTIALEVLNQVPLVDALVVPVGGGGMLAGIAITVKALKPSVKVYAAEPSN 213 (346)
T ss_dssp ---------SSSCHHHHHHHHHHHHHHHHHSTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred ---------CCCChHHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCC
Confidence 111221 12233345666665 57899999999988776654 47999999999864
No 177
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=68.36 E-value=25 Score=35.99 Aligned_cols=128 Identities=14% Similarity=0.082 Sum_probs=68.5
Q ss_pred CCChhhHHHH--------HHHHHcCCcEEEEc---------cc----CChh---------hH---HHHHHHH-HhcCCCc
Q psy6272 236 VIADRDKHVV--------DLIVREAVDIIIMS---------SV----TGAN---------SI---REMRGML-EDHVDRV 281 (547)
Q Consensus 236 ~lt~~D~~di--------~~~~~~g~d~I~~s---------fV----~sa~---------di---~~~r~~l-~~~~~~i 281 (547)
.||..|++.+ +.+.+.|+|+|=+- |. +... .. .++.+.+ +..+.+.
T Consensus 132 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~ 211 (343)
T 3kru_A 132 ELSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENK 211 (343)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTS
T ss_pred hcCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccC
Confidence 5788887776 46778999999876 32 2111 12 2222223 3335677
Q ss_pred eEEEEecCHH------HHhhHHHHHhh----cCEEEEcCCccccc-CC-hHHHHHHHHHHHHHH-HHcCCcEEEEcCCCC
Q psy6272 282 LILAKIETLL------GMEYMDEIIME----SDGVVLNRIQLAVA-TS-VEVTFLAQKMIAARC-NKQGKPFLVVGDILP 348 (547)
Q Consensus 282 ~IiakIEt~~------av~nldeIl~~----~DgImIargDLg~e-~~-~e~v~~~qk~ii~~c-~~~gKPvi~aTq~Le 348 (547)
.|..||--.+ .+++.-++++. .|.|=+.-|...-. ++ .+. .+-..++.. +..++||+....+-
T Consensus 212 pv~vRls~~~~~~~g~~~~~~~~~a~~l~~~vd~i~vs~g~~~~~~~~~~~~---~~~~~~~~ir~~~~iPVi~~Ggi~- 287 (343)
T 3kru_A 212 PIFVRVSADDYMEGGINIDMMVEYINMIKDKVDLIDVSSGGLLNVDINLYPG---YQVKYAETIKKRCNIKTSAVGLIT- 287 (343)
T ss_dssp CEEEEEECCCSSTTSCCHHHHHHHHHHHTTTCSEEEEECCCSSCCCCCCCTT---TTHHHHHHHHHHHTCEEEEESSCC-
T ss_pred CeEEEeechhhhccCccHHHHHHHHHHhhccccEEeccCCceEeeeecccCc---eeehHHHHHHHhcCcccceeeeee-
Confidence 8888885311 12233333322 68888743432211 00 010 111122222 23489999876532
Q ss_pred CCCcccccccCccchhhHHHHHHhC-ccEEeeC
Q psy6272 349 DHNVEEYSDVSIGDMNDVNSIVQDG-ADVVVLT 380 (547)
Q Consensus 349 ~PtraE~~~~~~~~~~Dv~nav~~g-~D~vmLs 380 (547)
+ . .++..++..| +|.|++.
T Consensus 288 t-----~--------e~Ae~~l~~G~aD~V~iG 307 (343)
T 3kru_A 288 T-----Q--------ELAEEILSNERADLVALG 307 (343)
T ss_dssp C-----H--------HHHHHHHHTTSCSEEEES
T ss_pred H-----H--------HHHHHHHhchhhHHHHHH
Confidence 1 2 4555678888 9999998
No 178
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=68.26 E-value=26 Score=36.31 Aligned_cols=34 Identities=24% Similarity=0.168 Sum_probs=26.9
Q ss_pred CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchH
Q psy6272 337 GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQA 385 (547)
Q Consensus 337 gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta 385 (547)
.+|+|....+- -- .|++.++..|||+|++. ....
T Consensus 278 ~ipvia~GGI~------~g--------~Dv~KaLalGAdaV~ig-~~~l 311 (365)
T 3sr7_A 278 KVEILASGGIR------HP--------LDIIKALVLGAKAVGLS-RTML 311 (365)
T ss_dssp TSEEEECSSCC------SH--------HHHHHHHHHTCSEEEES-HHHH
T ss_pred CCeEEEeCCCC------CH--------HHHHHHHHcCCCEEEEC-HHHH
Confidence 57998877643 24 89999999999999998 5444
No 179
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=68.25 E-value=24 Score=35.00 Aligned_cols=107 Identities=15% Similarity=0.147 Sum_probs=69.4
Q ss_pred hHHHHHH-HHHcCCcEEEEc-----ccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHh---hHHHHHhh-cCEEEEcC
Q psy6272 241 DKHVVDL-IVREAVDIIIMS-----SVTGANSIREMRGMLEDHVDRVLILAKIETLLGME---YMDEIIME-SDGVVLNR 310 (547)
Q Consensus 241 D~~di~~-~~~~g~d~I~~s-----fV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~---nldeIl~~-~DgImIar 310 (547)
|...+.. ..+.|+++|-+- |=.+.++++++|+.. ++.|+.| ..+- .+++-... +|||.++-
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v-----~lPvl~k----dfiid~~qv~~A~~~GAD~VlLi~ 143 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASV-----SIPVLRK----DFVVQPYQIHEARAHGADMLLLIV 143 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHC-----SSCEEEE----SCCCSHHHHHHHHHTTCSEEEEEG
T ss_pred CHHHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhC-----CCCEEEC----ccccCHHHHHHHHHcCCCEEEEec
Confidence 4555544 445899999763 223567788887653 4677766 2222 24444444 79999987
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.+|. .+ --+.++..|++.|..+++.+. |. .++..+...|+|.+-.+
T Consensus 144 a~l~----~~----~l~~l~~~a~~lGl~~lvev~-----t~-----------ee~~~A~~~Gad~IGv~ 189 (272)
T 3qja_A 144 AALE----QS----VLVSMLDRTESLGMTALVEVH-----TE-----------QEADRALKAGAKVIGVN 189 (272)
T ss_dssp GGSC----HH----HHHHHHHHHHHTTCEEEEEES-----SH-----------HHHHHHHHHTCSEEEEE
T ss_pred ccCC----HH----HHHHHHHHHHHCCCcEEEEcC-----CH-----------HHHHHHHHCCCCEEEEC
Confidence 7776 22 234578889999999887433 22 44456777899999988
No 180
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=66.89 E-value=71 Score=32.28 Aligned_cols=140 Identities=14% Similarity=0.150 Sum_probs=82.9
Q ss_pred CCChhhHHHH-HHHHHcCCcEEEEc-ccCChhhHHHHHHHHHhcCCCceEEEEe-cCHHHHhhHHHHHhh--cC--EEEE
Q psy6272 236 VIADRDKHVV-DLIVREAVDIIIMS-SVTGANSIREMRGMLEDHVDRVLILAKI-ETLLGMEYMDEIIME--SD--GVVL 308 (547)
Q Consensus 236 ~lt~~D~~di-~~~~~~g~d~I~~s-fV~sa~di~~~r~~l~~~~~~i~IiakI-Et~~av~nldeIl~~--~D--gImI 308 (547)
.++..|+..| +...+.|++.|=+- ++-++.|.+.++..... ..+..+.+-. =+.++++..-+-+.- .| .+++
T Consensus 24 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i~~ 102 (325)
T 3eeg_A 24 QLNTEEKIIVAKALDELGVDVIEAGFPVSSPGDFNSVVEITKA-VTRPTICALTRAKEADINIAGEALRFAKRSRIHTGI 102 (325)
T ss_dssp -CCTTHHHHHHHHHHHHTCSEEEEECTTSCHHHHHHHHHHHHH-CCSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCHhHHHHHHHHHHh-CCCCEEEEeecCCHHHHHHHHHhhcccCCCEEEEEe
Confidence 4555665555 45666899999875 45578888887766553 3555655543 234455432222222 23 3566
Q ss_pred cCCcccc----cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHH-HHhCccEEeeCCcc
Q psy6272 309 NRIQLAV----ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSI-VQDGADVVVLTQSE 383 (547)
Q Consensus 309 argDLg~----e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~na-v~~g~D~vmLsk~E 383 (547)
+=.|+-. ....++.....+.+++.|+++|+.|.+... +-+|.+. .++-+++.. ...|+|.+-|. +
T Consensus 103 s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~---d~~~~~~-----~~~~~~~~~~~~~G~~~i~l~--D 172 (325)
T 3eeg_A 103 GSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCE---DAGRADQ-----AFLARMVEAVIEAGADVVNIP--D 172 (325)
T ss_dssp ECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEE---TGGGSCH-----HHHHHHHHHHHHHTCSEEECC--B
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEcc---ccccchH-----HHHHHHHHHHHhcCCCEEEec--C
Confidence 6666532 233455555556788999999999887654 3333222 222566654 45599999996 6
Q ss_pred hHH
Q psy6272 384 QAH 386 (547)
Q Consensus 384 ta~ 386 (547)
|+=
T Consensus 173 T~G 175 (325)
T 3eeg_A 173 TTG 175 (325)
T ss_dssp SSS
T ss_pred ccC
Confidence 654
No 181
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=66.87 E-value=80 Score=29.17 Aligned_cols=105 Identities=20% Similarity=0.255 Sum_probs=59.4
Q ss_pred HHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHh-hcCEEEEcCCcc-------ccc
Q psy6272 245 VDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIM-ESDGVVLNRIQL-------AVA 316 (547)
Q Consensus 245 i~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~-~~DgImIargDL-------g~e 316 (547)
++.+.+.|+|+|.++... .++.++++.+ +. ..+-.-..|.+-+ .+... -+|.|++++..= +..
T Consensus 87 ~~~a~~~gad~v~l~~~~--~~~~~~~~~~---g~-~~~~~s~~t~~e~---~~a~~~g~d~v~~~~v~~t~~~~~~~~~ 157 (227)
T 2tps_A 87 VELALNLKADGIHIGQED--ANAKEVRAAI---GD-MILGVSAHTMSEV---KQAEEDGADYVGLGPIYPTETKKDTRAV 157 (227)
T ss_dssp HHHHHHHTCSEEEECTTS--SCHHHHHHHH---TT-SEEEEEECSHHHH---HHHHHHTCSEEEECCSSCCCSSSSCCCC
T ss_pred HHHHHHcCCCEEEECCCc--cCHHHHHHhc---CC-cEEEEecCCHHHH---HHHHhCCCCEEEECCCcCCCCCCCCCCc
Confidence 356788999999986533 3466666544 22 2222223454432 22222 279999854211 233
Q ss_pred CChHHHHHHHHHHHHHHHHcC-CcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 317 TSVEVTFLAQKMIAARCNKQG-KPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 317 ~~~e~v~~~qk~ii~~c~~~g-KPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.+++.+..+. +..+ +|++.+..+ . . .++..+...|+|++.++
T Consensus 158 ~~~~~l~~~~-------~~~~~~pvia~GGI--~-----~--------~nv~~~~~~Ga~gv~vg 200 (227)
T 2tps_A 158 QGVSLIEAVR-------RQGISIPIVGIGGI--T-----I--------DNAAPVIQAGADGVSMI 200 (227)
T ss_dssp CTTHHHHHHH-------HTTCCCCEEEESSC--C-----T--------TTSHHHHHTTCSEEEES
T ss_pred cCHHHHHHHH-------HhCCCCCEEEEcCC--C-----H--------HHHHHHHHcCCCEEEEh
Confidence 4544443332 2335 899987763 1 1 44555666799999998
No 182
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=66.67 E-value=8.1 Score=41.65 Aligned_cols=50 Identities=20% Similarity=0.339 Sum_probs=42.1
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHHH
Q psy6272 54 LTNIMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKLA 104 (547)
Q Consensus 54 ~tkIi~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~a 104 (547)
+-.+-+.+|...++.+.++.|+++|+++.-|| +|+..+.+.+ +++.+|+.
T Consensus 219 rL~v~aavG~~~d~~~~a~~l~~aG~d~I~id~a~g~~~~~~~-~i~~ir~~ 269 (496)
T 4fxs_A 219 RLRVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQ-RIRETRAA 269 (496)
T ss_dssp CBCCEEECCSSSCCHHHHHHHHHTTCSEEEEECSCTTSHHHHH-HHHHHHHH
T ss_pred ceeeeeeeccccchHHHHHHHHhccCceEEeccccccchHHHH-HHHHHHHH
Confidence 45567788888889999999999999999999 9998877777 77777753
No 183
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=66.48 E-value=22 Score=35.26 Aligned_cols=118 Identities=11% Similarity=0.054 Sum_probs=73.7
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcc-hHHHHHHHHHHHHHHhhhhhhhHH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSE-QAHHRVDILKEILKKTESVLWEKQ 407 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~E-ta~eaV~~m~~I~~~aE~~~~~~~ 407 (547)
+...|++.|.|+.+. .|..... ..+...-..|++.+... ++ +..++.+...+++++.+.. +..
T Consensus 76 ~A~~a~~~G~~~~iv-----~p~~~~~--------~k~~~~~~~Ga~v~~~~-~~~~~~~~~~~a~~~~~~~~~~-~~~- 139 (303)
T 2v03_A 76 LAMIAALKGYRMKLL-----MPDNMSQ--------ERRAAMRAYGAELILVT-KEQGMEGARDLALEMANRGEGK-LLD- 139 (303)
T ss_dssp HHHHHHHHTCEEEEE-----EETTSCH--------HHHHHHHHTTCEEEEEC-TTTHHHHHHHHHHHHHHTTSCE-ECC-
T ss_pred HHHHHHHcCCcEEEE-----ECCCCCH--------HHHHHHHHcCCEEEEEC-CCCCHHHHHHHHHHHHHhCCCc-ccC-
Confidence 667789999998875 3433222 44455666799999988 54 3336665555554432221 110
Q ss_pred HHHHhhhcCCCCCChh--hH-HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----cCCCCCEEEEeCchh
Q psy6272 408 VFEDLCALACPPLDPA--HS-IVIACVNAALKCQ--AVAIIVITCSGYSAKLVSK----YRPQCPILAVSSLGY 472 (547)
Q Consensus 408 ~f~~~~~~~~~~~~~~--~~-ia~aav~~a~~~~--a~aIvv~T~sG~tA~~isk----~RP~~pIiavt~~~~ 472 (547)
+..++. .+ -...+.|+..+++ .++|++.+-+|.++.-+++ ..|...|++|.+...
T Consensus 140 ----------~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~~ 203 (303)
T 2v03_A 140 ----------QFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQPEEG 203 (303)
T ss_dssp ----------TTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEECTT
T ss_pred ----------CcCChhhHHHhcCCcHHHHHHHhCCCCCEEEEEeCccHhHHHHHHHHHHhCCCCEEEEEcCCCC
Confidence 111111 11 2234567777764 7999999999999876664 469999999998654
No 184
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=66.47 E-value=21 Score=35.54 Aligned_cols=98 Identities=13% Similarity=0.108 Sum_probs=61.2
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhhHHH-HHHHHHhcCCCceEEEEecC---HHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANSIRE-MRGMLEDHVDRVLILAKIET---LLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~di~~-~r~~l~~~~~~i~IiakIEt---~~av~nldeIl~~-~DgImIar 310 (547)
.+.+++.++.|+|+|++. +--|.++=.+ ++...+..+.++.+|+.+=+ .++++.....-+. +||+|+.+
T Consensus 25 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (292)
T 2ojp_A 25 KKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVT 104 (292)
T ss_dssp HHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECC
Confidence 355678899999999873 3334444434 44445555668899998743 5555555444333 69998876
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-.+.- .+.+.+...-+.| |.+.+.|+++-
T Consensus 105 P~y~~-~s~~~l~~~f~~i---a~a~~lPiilY 133 (292)
T 2ojp_A 105 PYYNR-PSQEGLYQHFKAI---AEHTDLPQILY 133 (292)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HTTCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 55432 2455666555555 44568999874
No 185
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=66.45 E-value=19 Score=32.79 Aligned_cols=62 Identities=18% Similarity=0.240 Sum_probs=47.3
Q ss_pred EEEecCCEEEEeec--cccccCCCccEEEecCCCccc--ccCCCCEEEEec----eeEEEEEEEeCCeEE
Q psy6272 149 VEIAQGANIVLTAN--QLIETKGTVKRLFVDSMELPK--RVIPDDIVYIDR----NIKLKVVEKENNDVH 210 (547)
Q Consensus 149 i~L~~G~~v~lt~~--~~~~~~~~~~~i~v~~~~~~~--~v~~Gd~I~idD----~I~l~V~~v~~~~v~ 210 (547)
.-++.|++..++.. ..|+..+......++...|.. .+++|+.+.+++ .+..+|.+++++.+.
T Consensus 45 ~Gm~~Ge~~~v~ipp~~aYG~~~~~lv~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~ 114 (158)
T 3cgm_A 45 EGREEGEAFQAHVPAEKAYGPHDPEGVQVVPLSAFPEDAEVVPGAQFYAQDMEGNPMPLTVVAVEGEEVT 114 (158)
T ss_dssp TTCBTTCEEEEEECGGGTTCCCCGGGEEEEEGGGSCTTSCCCTTCEEEEEETTTEEEEEEEEEEETTEEE
T ss_pred cCCCCCCEEEEEECcHHHcCCCCcceEEEEEHHHCCCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEE
Confidence 34678998887764 566666667777777777754 789999999974 567889999998765
No 186
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=66.27 E-value=29 Score=33.32 Aligned_cols=111 Identities=15% Similarity=0.135 Sum_probs=69.2
Q ss_pred ChhhHHHHHH-HHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecC-H--------HHHhhHHHHHhh-cCEE
Q psy6272 238 ADRDKHVVDL-IVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIET-L--------LGMEYMDEIIME-SDGV 306 (547)
Q Consensus 238 t~~D~~di~~-~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt-~--------~av~nldeIl~~-~DgI 306 (547)
++.+...+.. +.+.|+.+|.+ .+.++++++|+.. ++.|+..+=. . .-++.+++.... +|.|
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad~I 105 (229)
T 3q58_A 34 KPEIVAAMAQAAASAGAVAVRI---EGIENLRTVRPHL-----SVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGADII 105 (229)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHGGGC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEE
T ss_pred CcchHHHHHHHHHHCCCcEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCCEE
Confidence 4556666654 44578999886 5888988888754 3566543210 0 123456666666 7998
Q ss_pred EEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEee
Q psy6272 307 VLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVL 379 (547)
Q Consensus 307 mIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmL 379 (547)
.+.-..+. .++ ..+++++.++++|.+++.-. .|. .+.-.+...|+|.+..
T Consensus 106 ~l~~~~~~---~p~----~l~~~i~~~~~~g~~v~~~v-----~t~-----------eea~~a~~~Gad~Ig~ 155 (229)
T 3q58_A 106 AFDASFRS---RPV----DIDSLLTRIRLHGLLAMADC-----STV-----------NEGISCHQKGIEFIGT 155 (229)
T ss_dssp EEECCSSC---CSS----CHHHHHHHHHHTTCEEEEEC-----SSH-----------HHHHHHHHTTCSEEEC
T ss_pred EECccccC---ChH----HHHHHHHHHHHCCCEEEEec-----CCH-----------HHHHHHHhCCCCEEEe
Confidence 87643321 111 23457778888999998742 232 4446678889999964
No 187
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=66.19 E-value=11 Score=40.42 Aligned_cols=122 Identities=15% Similarity=0.235 Sum_probs=74.3
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcch----HHHHHHHHHHHHHHhhhhhh
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQ----AHHRVDILKEILKKTESVLW 404 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Et----a~eaV~~m~~I~~~aE~~~~ 404 (547)
+...|+..|.++.+. .|..... .-+...-..|++.+... ++. +..+++...+++++....++
T Consensus 128 ~A~~a~~~G~~~~iv-----~p~~~~~--------~k~~~~~~~GA~v~~~~-~~~~~~~~~~~~~~a~~~~~~~~~~~~ 193 (527)
T 3pc3_A 128 LAMACAVKGYKCIIV-----MPEKMSN--------EKVSALRTLGAKIIRTP-TEAAYDSPEGLIYVAQQLQRETPNSIV 193 (527)
T ss_dssp HHHHHHHHTCEEEEE-----EETTSCH--------HHHHHHHHTTCEEEEEC-TTSCTTSTTSHHHHHHHHHHHSSSEEC
T ss_pred HHHHHHHhCCeEEEE-----EcCCCCH--------HHHHHHHHCCCEEEEeC-CCCCcccHHHHHHHHHHHHHhCCCcEe
Confidence 566789999998875 4544333 44555667899999887 432 11345555555544333222
Q ss_pred hHHHHHHhhhcCCCCCChhhHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHhc----CCCCCEEEEeCchh
Q psy6272 405 EKQVFEDLCALACPPLDPAHSIVIACVNAALKCQ--AVAIIVITCSGYSAKLVSKY----RPQCPILAVSSLGY 472 (547)
Q Consensus 405 ~~~~f~~~~~~~~~~~~~~~~ia~aav~~a~~~~--a~aIvv~T~sG~tA~~isk~----RP~~pIiavt~~~~ 472 (547)
..+ |. .+.++..--...+.|+..+++ .++||+.+-+|.+..-++++ .|.+.|++|.+...
T Consensus 194 ~~~-~~-------n~~n~~~g~~t~~~Ei~~q~~~~~d~vv~~vG~GG~~~G~~~~~k~~~p~~~vigve~~~~ 259 (527)
T 3pc3_A 194 LDQ-YR-------NAGNPLAHYDGTAAEILWQLDNKVDMIVVSAGTAGTISGIGRKIKEQVPSCQIVGVDPYGS 259 (527)
T ss_dssp CCT-TT-------CTHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETTC
T ss_pred cCC-CC-------CcchHHHHHHHHHHHHHHhcCCCCCEEEEecCccHHHHHHHHHHHHhCCCCEEEEEecCCc
Confidence 111 10 010111112334567777764 79999999999988766654 89999999998654
No 188
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=65.99 E-value=46 Score=31.79 Aligned_cols=101 Identities=16% Similarity=0.123 Sum_probs=67.1
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEe-------cC----HHHHhhHHHHHhh-----cCE
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKI-------ET----LLGMEYMDEIIME-----SDG 305 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakI-------Et----~~av~nldeIl~~-----~Dg 305 (547)
.+.++++.+.|+|+|-+....-.++++++++.+.+.|-.+..+.-- .. .++++.+.+.+.. ++.
T Consensus 41 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~ 120 (287)
T 3kws_A 41 NEKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTG 120 (287)
T ss_dssp HHHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 3458899999999999998877889999999998776554333210 01 2345666666655 367
Q ss_pred EEEcCCcccc--cC-----ChHHHHHHHHHHHHHHHHcCCcEEE
Q psy6272 306 VVLNRIQLAV--AT-----SVEVTFLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 306 ImIargDLg~--e~-----~~e~v~~~qk~ii~~c~~~gKPvi~ 342 (547)
|.+..|.-.. .. .++.+...-+++...|+++|..+.+
T Consensus 121 v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 164 (287)
T 3kws_A 121 VIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIF 164 (287)
T ss_dssp EEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 7776553221 11 1245556667788888899988776
No 189
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=65.80 E-value=33 Score=32.55 Aligned_cols=114 Identities=11% Similarity=0.097 Sum_probs=61.8
Q ss_pred HHHHHcCCcEEEEcccC---ChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcc-cccCCh--
Q psy6272 246 DLIVREAVDIIIMSSVT---GANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQL-AVATSV-- 319 (547)
Q Consensus 246 ~~~~~~g~d~I~~sfV~---sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDL-g~e~~~-- 319 (547)
..+.+.|+|+|.+..-+ ..+++++..+...+.| +..+.-+-+.+-.+.+.++ -.+.|-+.+.++ | .|.
T Consensus 76 ~~~~~~Gad~Vll~~ser~l~~~e~~~~~~~a~~~G--l~~iv~v~~~~e~~~~~~~--~~~~i~~~~~~~iG--tG~~~ 149 (219)
T 2h6r_A 76 EAIKDCGCKGTLINHSEKRMLLADIEAVINKCKNLG--LETIVCTNNINTSKAVAAL--SPDCIAVEPPELIG--TGIPV 149 (219)
T ss_dssp HHHHHHTCCEEEESBTTBCCBHHHHHHHHHHHHHHT--CEEEEEESSSHHHHHHTTT--CCSEEEECCCC----------
T ss_pred HHHHHcCCCEEEECCccccCCHHHHHHHHHHHHHCC--CeEEEEeCCchHHHHHHhC--CCCEEEEEeccccc--cCCCC
Confidence 66779999999998853 3445555555554443 4445555333333333222 236677777776 3 231
Q ss_pred -HHHHH-HHHHHHHHHHHc--CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 320 -EVTFL-AQKMIAARCNKQ--GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 320 -e~v~~-~qk~ii~~c~~~--gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
..-+. ++ .+.+..++. +.|++...-+ ..-.|+..+...|+|+++..
T Consensus 150 ~t~~~~~~~-~~~~~ir~~~~~~~ii~ggGI--------------~~~~~~~~~~~~gaDgvlVG 199 (219)
T 2h6r_A 150 SKANPEVVE-GTVRAVKEINKDVKVLCGAGI--------------SKGEDVKAALDLGAEGVLLA 199 (219)
T ss_dssp ------CSH-HHHHHHHHHCTTCEEEECSSC--------------CSHHHHHHHHTTTCCCEEES
T ss_pred ccCCHHHHH-HHHHHHHhccCCCeEEEEeCc--------------CcHHHHHHHhhCCCCEEEEc
Confidence 11111 22 244444443 6788775442 11156666777899999996
No 190
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=65.59 E-value=83 Score=31.71 Aligned_cols=126 Identities=14% Similarity=0.110 Sum_probs=67.5
Q ss_pred CCChhhHHHH--------HHHHHcCCcEEEEcc-------------cCCh---------hh---HHHHHHHHHhcCCCce
Q psy6272 236 VIADRDKHVV--------DLIVREAVDIIIMSS-------------VTGA---------NS---IREMRGMLEDHVDRVL 282 (547)
Q Consensus 236 ~lt~~D~~di--------~~~~~~g~d~I~~sf-------------V~sa---------~d---i~~~r~~l~~~~~~i~ 282 (547)
.||..|++.+ +.+.+.|+|+|=+.. .+.. +. +.++.+.+.+.- +..
T Consensus 133 ~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~p 211 (338)
T 1z41_A 133 EMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGP 211 (338)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCc
Confidence 5787876554 467789999996543 2221 11 222222333322 567
Q ss_pred EEEEecCH------HHHhhHHHHHhh-----cCEEEEcCCccc-c--cCChH-HHHHHHHHHHHHHHHcCCcEEEEcCCC
Q psy6272 283 ILAKIETL------LGMEYMDEIIME-----SDGVVLNRIQLA-V--ATSVE-VTFLAQKMIAARCNKQGKPFLVVGDIL 347 (547)
Q Consensus 283 IiakIEt~------~av~nldeIl~~-----~DgImIargDLg-~--e~~~e-~v~~~qk~ii~~c~~~gKPvi~aTq~L 347 (547)
|..||--. ...++..++++. +|+|-+.-|... . ..+.. .+..+ +++ .+..++||+....+-
T Consensus 212 v~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~-~~i---r~~~~iPVi~~Ggi~ 287 (338)
T 1z41_A 212 LFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFA-EKI---REQADMATGAVGMIT 287 (338)
T ss_dssp EEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHH-HHH---HHHHCCEEEECSSCC
T ss_pred EEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHH-HHH---HHHCCCCEEEECCCC
Confidence 88887321 012222233322 588888765432 1 11211 12111 112 234589999866532
Q ss_pred CCCCcccccccCccchhhHHHHHHhC-ccEEeeC
Q psy6272 348 PDHNVEEYSDVSIGDMNDVNSIVQDG-ADVVVLT 380 (547)
Q Consensus 348 e~PtraE~~~~~~~~~~Dv~nav~~g-~D~vmLs 380 (547)
.. .|+..++..| +|.|++.
T Consensus 288 ------s~--------~~a~~~l~~G~aD~V~iG 307 (338)
T 1z41_A 288 ------DG--------SMAEEILQNGRADLIFIG 307 (338)
T ss_dssp ------SH--------HHHHHHHHTTSCSEEEEC
T ss_pred ------CH--------HHHHHHHHcCCceEEeec
Confidence 12 6667788888 9999998
No 191
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=65.59 E-value=33 Score=33.03 Aligned_cols=111 Identities=14% Similarity=0.160 Sum_probs=69.2
Q ss_pred ChhhHHHHHH-HHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEE--EecC----H---HHHhhHHHHHhh-cCEE
Q psy6272 238 ADRDKHVVDL-IVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILA--KIET----L---LGMEYMDEIIME-SDGV 306 (547)
Q Consensus 238 t~~D~~di~~-~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~Iia--kIEt----~---~av~nldeIl~~-~DgI 306 (547)
+..+...+.. ..+.|+.+|.+ .+.++++++|+.. ++.|+. |..- . .-++.+++.+.. +|.|
T Consensus 34 ~~~~~~~~A~a~~~~Ga~~i~~---~~~~~i~~ir~~v-----~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad~V 105 (232)
T 3igs_A 34 KPEIVAAMALAAEQAGAVAVRI---EGIDNLRMTRSLV-----SVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAAII 105 (232)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEE---ESHHHHHHHHTTC-----CSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCSEE
T ss_pred CcchHHHHHHHHHHCCCeEEEE---CCHHHHHHHHHhc-----CCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCCEE
Confidence 4556666654 44578998876 5788888888643 356664 3210 0 124456666666 7998
Q ss_pred EEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEee
Q psy6272 307 VLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVL 379 (547)
Q Consensus 307 mIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmL 379 (547)
.+.-..+. .+ ...+++++.++++|.+++.-. .|. .++-.+...|+|.+..
T Consensus 106 ~l~~~~~~---~p----~~l~~~i~~~~~~g~~v~~~v-----~t~-----------eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 106 AVDGTARQ---RP----VAVEALLARIHHHHLLTMADC-----SSV-----------DDGLACQRLGADIIGT 155 (232)
T ss_dssp EEECCSSC---CS----SCHHHHHHHHHHTTCEEEEEC-----CSH-----------HHHHHHHHTTCSEEEC
T ss_pred EECccccC---CH----HHHHHHHHHHHHCCCEEEEeC-----CCH-----------HHHHHHHhCCCCEEEE
Confidence 87644321 11 133457778888999998742 232 4446678889999964
No 192
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=65.46 E-value=95 Score=29.48 Aligned_cols=141 Identities=9% Similarity=0.052 Sum_probs=71.1
Q ss_pred HHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcch-HH-HHHHHHHHHHHHhh-------hhhh
Q psy6272 334 NKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQ-AH-HRVDILKEILKKTE-------SVLW 404 (547)
Q Consensus 334 ~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Et-a~-eaV~~m~~I~~~aE-------~~~~ 404 (547)
++.+.|+++.|- ..+. .+...+...|+|.++.. ... .. .++..+.+...... .+..
T Consensus 71 r~~~~pvi~lt~------~~~~--------~~~~~a~~~Ga~dyl~K-p~~~~~~~~~~~~~~~~~~~~~~ILivDD~~~ 135 (259)
T 3luf_A 71 LERGLPVVILTA------DISE--------DKREAWLEAGVLDYVMK-DSRHSLQYAVGLVHRLYLNQQIEVLVVDDSRT 135 (259)
T ss_dssp HHTTCCEEEEEC------C-CH--------HHHHHHHHTTCCEEEEC-SSHHHHHHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred HhCCCCEEEEEc------cCCH--------HHHHHHHHCCCcEEEeC-CchhHHHHHHHhhhhHhhcCCCcEEEEeCCHH
Confidence 345799998775 2344 77788999999999887 422 22 45544443332211 1111
Q ss_pred hHHHHH-HhhhcCCCCCChhhHHHHHHHHHHHhcC-CcEEEE----EcCCchHH-HHHHhcCC--CCCEEEEeCchhccc
Q psy6272 405 EKQVFE-DLCALACPPLDPAHSIVIACVNAALKCQ-AVAIIV----ITCSGYSA-KLVSKYRP--QCPILAVSSLGYVCR 475 (547)
Q Consensus 405 ~~~~f~-~~~~~~~~~~~~~~~ia~aav~~a~~~~-a~aIvv----~T~sG~tA-~~isk~RP--~~pIiavt~~~~~ar 475 (547)
...... .+... ........ =+..|.+...+.. .+.|++ ...+|... +.+-+..| .+||+++|.+.....
T Consensus 136 ~~~~l~~~L~~~-~~~v~~a~-~~~eal~~l~~~~~~dlvllD~~mP~~dG~~l~~~lr~~~~~~~~~ii~~s~~~~~~~ 213 (259)
T 3luf_A 136 SRHRTMAQLRKQ-LLQVHEAS-HAREALATLEQHPAIRLVLVDYYMPEIDGISLVRMLRERYSKQQLAIIGISVSDKRGL 213 (259)
T ss_dssp HHHHHHHHHHTT-TCEEEEES-SHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHHHCCTTTSEEEEEECSSSSSH
T ss_pred HHHHHHHHHHHc-CcEEEEeC-CHHHHHHHHhcCCCCCEEEEcCCCCCCCHHHHHHHHHhccCCCCCeEEEEEccCCHHH
Confidence 111111 11110 00000011 1223333333433 465543 23466543 44444433 589999998765443
Q ss_pred -cccccccceEEeecCC
Q psy6272 476 -HLNVYRNIRPLHYIRN 491 (547)
Q Consensus 476 -~l~l~~GV~p~~~~~~ 491 (547)
.-.+-.|+.-++.++.
T Consensus 214 ~~~a~~~Ga~~yl~KP~ 230 (259)
T 3luf_A 214 SARYLKQGANDFLNQPF 230 (259)
T ss_dssp HHHHHHTTCSEEEESSC
T ss_pred HHHHHhcChhheEcCCC
Confidence 3346779999888763
No 193
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=64.92 E-value=30 Score=33.41 Aligned_cols=113 Identities=19% Similarity=0.163 Sum_probs=64.6
Q ss_pred HHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCE-EEEcC-Cc-ccccCCh-HHHH
Q psy6272 248 IVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDG-VVLNR-IQ-LAVATSV-EVTF 323 (547)
Q Consensus 248 ~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~Dg-ImIar-gD-Lg~e~~~-e~v~ 323 (547)
+.+.|+|+|.++-.. .+++.++.+.+.+.|-...+... .....+.+.++...++| +.+.. +. -|..-+. +...
T Consensus 114 a~~aGadgv~v~d~~-~~~~~~~~~~~~~~g~~~i~~~a--~~t~~e~~~~~~~~~~g~v~~~s~~G~tG~~~~~~~~~~ 190 (262)
T 1rd5_A 114 MKEAGVHGLIVPDLP-YVAAHSLWSEAKNNNLELVLLTT--PAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVE 190 (262)
T ss_dssp HHHTTCCEEECTTCB-TTTHHHHHHHHHHTTCEECEEEC--TTSCHHHHHHHHHHCCSCEEEECSSCCBCTTSCBCTHHH
T ss_pred HHHcCCCEEEEcCCC-hhhHHHHHHHHHHcCCceEEEEC--CCCCHHHHHHHHhcCCCeEEEecCCCCCCCCcCCCchHH
Confidence 788999999987443 35677777777766644333222 33335566777777664 33322 11 1221122 1122
Q ss_pred HHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 324 LAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 324 ~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
...+ +..+..+.|+++...+= | . .++..+...|+|++...
T Consensus 191 ~~i~---~v~~~~~~pI~vgGGI~---~---~--------e~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 191 SLIQ---EVKKVTNKPVAVGFGIS---K---P--------EHVKQIAQWGADGVIIG 230 (262)
T ss_dssp HHHH---HHHHHCSSCEEEESCCC---S---H--------HHHHHHHHTTCSEEEEC
T ss_pred HHHH---HHHhhcCCeEEEECCcC---C---H--------HHHHHHHHcCCCEEEEC
Confidence 1112 22233479999876631 1 2 66777777899999997
No 194
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=64.58 E-value=1.2e+02 Score=30.19 Aligned_cols=140 Identities=9% Similarity=0.123 Sum_probs=86.2
Q ss_pred CCChhhHHHH-HHHHHcCCcEEEEc-ccCChhhHHHHHHHHHhcCCCceEEEEecC-HHHHhhHHHHHhh--cC--EEEE
Q psy6272 236 VIADRDKHVV-DLIVREAVDIIIMS-SVTGANSIREMRGMLEDHVDRVLILAKIET-LLGMEYMDEIIME--SD--GVVL 308 (547)
Q Consensus 236 ~lt~~D~~di-~~~~~~g~d~I~~s-fV~sa~di~~~r~~l~~~~~~i~IiakIEt-~~av~nldeIl~~--~D--gImI 308 (547)
.++..|+..| +...+.|++.|=+- +..++.|.+.++..... .++..+.+-.-+ ..+++..-+-+.. .| .+++
T Consensus 23 ~~~~~~K~~i~~~L~~~Gv~~IE~g~p~~~~~d~e~v~~i~~~-~~~~~i~~l~~~~~~di~~a~~~~~~ag~~~v~i~~ 101 (293)
T 3ewb_X 23 NFDVKEKIQIALQLEKLGIDVIEAGFPISSPGDFECVKAIAKA-IKHCSVTGLARCVEGDIDRAEEALKDAVSPQIHIFL 101 (293)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEECGGGCHHHHHHHHHHHHH-CCSSEEEEEEESSHHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccHHHHHHHHHHh-cCCCEEEEEecCCHHHHHHHHHHHhhcCCCEEEEEe
Confidence 4566776665 45666899999775 44566777777776543 355666665533 2333322221111 23 4666
Q ss_pred cCCccc----ccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHH-HHHhCccEEeeCCcc
Q psy6272 309 NRIQLA----VATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNS-IVQDGADVVVLTQSE 383 (547)
Q Consensus 309 argDLg----~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~n-av~~g~D~vmLsk~E 383 (547)
+-.|+- .....++.....+++++.|+++|..|.+... +.+|.+. .++-+++. +...|+|.+.|. +
T Consensus 102 ~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~---d~~~~~~-----~~~~~~~~~~~~~G~~~i~l~--D 171 (293)
T 3ewb_X 102 ATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPE---DATRSDR-----AFLIEAVQTAIDAGATVINIP--D 171 (293)
T ss_dssp ECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEE---TGGGSCH-----HHHHHHHHHHHHTTCCEEEEE--C
T ss_pred cCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEec---cCCCCCH-----HHHHHHHHHHHHcCCCEEEec--C
Confidence 666653 3455677777778899999999999987543 3333332 12255553 556899999996 6
Q ss_pred hHH
Q psy6272 384 QAH 386 (547)
Q Consensus 384 ta~ 386 (547)
|+=
T Consensus 172 T~G 174 (293)
T 3ewb_X 172 TVG 174 (293)
T ss_dssp SSS
T ss_pred CCC
Confidence 554
No 195
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=64.40 E-value=67 Score=30.24 Aligned_cols=101 Identities=10% Similarity=0.105 Sum_probs=57.0
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEe-----c--CHHHHhhHHHHHhhc-CEEEEcCCcc
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKI-----E--TLLGMEYMDEIIMES-DGVVLNRIQL 313 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakI-----E--t~~av~nldeIl~~~-DgImIargDL 313 (547)
.+.++.+.+.|++.++..- .+.++...+.++..+.. ++....-+ . +.+.++.|++.+... +. .+|=|..
T Consensus 22 ~~~l~~~~~~Gv~~~v~~~-~~~~~~~~~~~l~~~~~-~~~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~~-~~~iGEi 98 (259)
T 1zzm_A 22 EASLQRAAQAGVGKIIVPA-TEAENFARVLALAENYQ-PLYAALGLHPGMLEKHSDVSLEQLQQALERRPAK-VVAVGEI 98 (259)
T ss_dssp HHHHHHHHHTTEEEEEEEC-CSGGGHHHHHHHHHHCT-TEEEEECCCGGGGGGCCHHHHHHHHHHHHHCCSS-EEEEEEE
T ss_pred HHHHHHHHHcCCCEEEEec-CCHHHHHHHHHHHHhCC-CeEEEEEecccccccCCHHHHHHHHHHHhcCCCC-EEEEEEe
Confidence 3457788899999877653 34677777777665433 33222222 1 224455566655431 22 2333566
Q ss_pred cccCChH----HHH-HHHHHHHHHHHHcCCcEEEEcC
Q psy6272 314 AVATSVE----VTF-LAQKMIAARCNKQGKPFLVVGD 345 (547)
Q Consensus 314 g~e~~~e----~v~-~~qk~ii~~c~~~gKPvi~aTq 345 (547)
|.+.... +.. ..-+..++.|.+.|+||++.|.
T Consensus 99 Gld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~ 135 (259)
T 1zzm_A 99 GLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSR 135 (259)
T ss_dssp EEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEec
Confidence 6654221 111 1224456779999999999764
No 196
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=64.30 E-value=25 Score=44.47 Aligned_cols=122 Identities=9% Similarity=-0.010 Sum_probs=74.7
Q ss_pred hHHHHHHHHHcCCcE--EEEcccCChhhHHHHHHHHHhcCCCceEEEEecCH-HHHhhHHHHHhh-cCEEE---EcCCcc
Q psy6272 241 DKHVVDLIVREAVDI--IIMSSVTGANSIREMRGMLEDHVDRVLILAKIETL-LGMEYMDEIIME-SDGVV---LNRIQL 313 (547)
Q Consensus 241 D~~di~~~~~~g~d~--I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~-~av~nldeIl~~-~DgIm---IargDL 313 (547)
..+.++.+++.|++. |.+++=. + ..+++.+++.+. .+.++..+-+. +|.+....+.+. +|+|+ +--+|=
T Consensus 655 ~~~~~~~~~~~gv~i~gv~~~~G~-p-~~e~~~~~l~~~--gi~~i~~v~~~~~a~~~v~~l~~aG~D~iV~~q~~G~ea 730 (2060)
T 2uva_G 655 QIPLLGRLRADGVPIEGLTIGAGV-P-SIEVANEYIQTL--GIRHISFKPGSVDAIQQVINIAKANPTFPIILQWTGGRG 730 (2060)
T ss_dssp HHHHHHHHHTTTCCEEEEEEESSC-C-CHHHHHHHHHHS--CCSEEEECCCSHHHHHHHHHHHHHCTTSCEEEEECCTTS
T ss_pred HHHHHHHHHHcCCCcceEeecCCC-C-CHHHHHHHHHHc--CCeEEEecCCHHHHHHHHHHHHHcCCCEEEEeeeEcccC
Confidence 346788999999999 7776633 1 233455666655 45556555443 344443444555 79988 554455
Q ss_pred cccCChHHHHHHHHHHHHHHHH-cCCcEEEEcCCCCCCCcccccccCccchhhHHHHH-----------HhCccEEeeC
Q psy6272 314 AVATSVEVTFLAQKMIAARCNK-QGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIV-----------QDGADVVVLT 380 (547)
Q Consensus 314 g~e~~~e~v~~~qk~ii~~c~~-~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav-----------~~g~D~vmLs 380 (547)
|-..|.+++..-.-.++...++ .++|+|.+..+- .- .|++.++ ..|||+|++.
T Consensus 731 GGH~g~~d~~~~~l~lv~~i~~~~~ipviaaGGI~------~g--------~~i~aaltg~ws~~~g~palGAdgV~~G 795 (2060)
T 2uva_G 731 GGHHSFEDFHQPILLMYSRIRKCSNIVLVAGSGFG------GS--------EDTYPYLTGSWSTKFGYPPMPFDGCMFG 795 (2060)
T ss_dssp SSSCCSCCSHHHHHHHHHHHHTSTTEEEEEESSCC------SH--------HHHHHHHHTCGGGTTTSCCCCCSCEEES
T ss_pred CCCCCcccccchHHHHHHHHHHHcCCCEEEeCCCC------CH--------HHHHHHhcCcchhhcCCCCCCCCEEEEc
Confidence 5554532211111123333333 489999998743 24 8889999 9999999997
No 197
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=64.06 E-value=19 Score=33.32 Aligned_cols=76 Identities=9% Similarity=-0.015 Sum_probs=52.7
Q ss_pred EEEecCCEEEEeec--cccccCCCccEEEecCCCccc--ccCCCCEEEEec---eeEEEEEEEeCCeEEEEEEeCcEeCC
Q psy6272 149 VEIAQGANIVLTAN--QLIETKGTVKRLFVDSMELPK--RVIPDDIVYIDR---NIKLKVVEKENNDVHCTVIRGGKLMD 221 (547)
Q Consensus 149 i~L~~G~~v~lt~~--~~~~~~~~~~~i~v~~~~~~~--~v~~Gd~I~idD---~I~l~V~~v~~~~v~~~V~~gG~L~s 221 (547)
.-++.|++..|+.. ..|+..+......++...|.. .+++|+.+.+.+ .+..+|.+++++.|+ +.-+.-| .
T Consensus 50 ~Gm~~Ge~~~v~ippe~aYG~~~~~~v~~v~~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~--vD~NHPL-A 126 (171)
T 2k8i_A 50 EGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVV--VDGNHML-A 126 (171)
T ss_dssp TTCCTTCEEEEEEETTTSSCCCCTTSEEEEEGGGGTTSSCCCTTCEEEEEETTEEEEEEEEEECSSEEE--EESCCSS-C
T ss_pred cCCCCCCEEEEEECcHHhcCCCChhhEEEeeHHHCCcccCccCCcEEEEECCCCcEEEEEEEEcCCEEE--EeCCCCC-C
Confidence 34678998887764 456666667777777767654 689999999986 566789999988765 3333333 4
Q ss_pred Cceeee
Q psy6272 222 NQLVTV 227 (547)
Q Consensus 222 ~Kginl 227 (547)
.|.++|
T Consensus 127 Gk~L~F 132 (171)
T 2k8i_A 127 GQNLKF 132 (171)
T ss_dssp CCEEEE
T ss_pred CCeEEE
Confidence 455555
No 198
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=64.02 E-value=34 Score=31.68 Aligned_cols=69 Identities=9% Similarity=0.024 Sum_probs=44.6
Q ss_pred hHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEE--ecCHHHHhhHHHHHhh-cCEEEEcCCccc
Q psy6272 241 DKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAK--IETLLGMEYMDEIIME-SDGVVLNRIQLA 314 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~Iiak--IEt~~av~nldeIl~~-~DgImIargDLg 314 (547)
+...+..+.+.|+|+|.+ |-.....+..++++.+....++.|++- | ..+|+.++++. +||+.+|++=+.
T Consensus 110 t~~e~~~a~~~G~d~v~v-~~t~~~g~~~~~~l~~~~~~~ipvia~GGI----~~~~i~~~~~~Ga~gv~vGsai~~ 181 (212)
T 2v82_A 110 TATEAFTALEAGAQALKI-FPSSAFGPQYIKALKAVLPSDIAVFAVGGV----TPENLAQWIDAGCAGAGLGSDLYR 181 (212)
T ss_dssp SHHHHHHHHHTTCSEEEE-TTHHHHCHHHHHHHHTTSCTTCEEEEESSC----CTTTHHHHHHHTCSEEEECTTTCC
T ss_pred CHHHHHHHHHCCCCEEEE-ecCCCCCHHHHHHHHHhccCCCeEEEeCCC----CHHHHHHHHHcCCCEEEEChHHhC
Confidence 344567788999999987 322233455555554433225676652 3 14688888877 899999987554
No 199
>3tqk_A Phospho-2-dehydro-3-deoxyheptonate aldolase; transferase; 2.30A {Francisella tularensis}
Probab=63.91 E-value=39 Score=34.89 Aligned_cols=159 Identities=16% Similarity=0.178 Sum_probs=91.1
Q ss_pred HHHHHHHhcCCCceEEEE---ecCHHHHhhHHHHHhh------cCEEEEcCCccc---ccCCh----------------H
Q psy6272 269 EMRGMLEDHVDRVLILAK---IETLLGMEYMDEIIME------SDGVVLNRIQLA---VATSV----------------E 320 (547)
Q Consensus 269 ~~r~~l~~~~~~i~Iiak---IEt~~av~nldeIl~~------~DgImIargDLg---~e~~~----------------e 320 (547)
++++.|...++++.+|+- ||+++++...-+-++. .+++.|=|+-+- ...|+ +
T Consensus 39 ~i~~Il~G~d~rllVIaGPCSied~eq~leyA~~Lk~~~~~~~d~l~~vmR~y~~KPRTs~g~kGL~nDP~ld~s~~i~~ 118 (346)
T 3tqk_A 39 EIANIIHGNDDRVAVVVGPCSIHDPAAAIEYATKLKEQVKKFHKDILIIMRVYFEKPRTTIGWKGFINDPDLDNSYNINK 118 (346)
T ss_dssp HHHHHHHTSSCSEEEEEECSSCSCHHHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCCSSCSCCCTTTCTTSSSCCCHHH
T ss_pred HHHHHHcCCCCCEEEEEecCccCCHHHHHHHHHHHHHHHhhhcccceEEeeecccCCCCCcCccccccCCCCCCCccHHH
Confidence 345566656667888875 8888876544333332 147888887651 12332 3
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHhh
Q psy6272 321 VTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTE 400 (547)
Q Consensus 321 ~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~aE 400 (547)
-+..+.+.+. ...+.|.|+. |.|| +|.-.++ +.|-+|..-.. .|.+|
T Consensus 119 GL~~~R~ll~-~~~e~GLpia--tE~l-d~~~~qy--------------v~dlvs~~aIG---------------ARt~e 165 (346)
T 3tqk_A 119 GLRLARNLLS-DLTNMGLPCA--TEFL-DVITPQY--------------FAELITWGAIG---------------ARTVE 165 (346)
T ss_dssp HHHHHHHHHH-HHHHTTCCEE--EECC-SSSGGGG--------------TGGGCSEEEEC---------------GGGTT
T ss_pred HHHHHHHHHH-HHHhcCCCEE--EEec-CcCCHHH--------------HHHHhheeeeC---------------ccccc
Confidence 3555555433 5678999987 6888 5544444 44556667777 77777
Q ss_pred hhhhhHHHHHHhhhc--CCCCCChhhHHHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCCCCC
Q psy6272 401 SVLWEKQVFEDLCAL--ACPPLDPAHSIVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCP 463 (547)
Q Consensus 401 ~~~~~~~~f~~~~~~--~~~~~~~~~~ia~aav~~a~~~~a~aIvv~T~sG~tA~~isk~RP~~p 463 (547)
+. .++.+-..+... .+...+..-..+..|+.+|.. ....+-.|..|++|..-.+=.|.|-
T Consensus 166 nq-~hre~asg~s~PVg~Kngt~gti~~ai~Ai~aa~~--pH~Fl~~~~~G~~aiv~T~GN~~~H 227 (346)
T 3tqk_A 166 SQ-VHRELASGLSASIGFKNATNGDVQVAVDAVKSATY--PHHFLSTTKSGSTAIFATKGNQNGH 227 (346)
T ss_dssp CH-HHHHHHTTCSSEEEEECCTTCCSHHHHHHHHHHTS--CCEEEEECTTSCEEEEECCCCSCEE
T ss_pred CH-HHHHHhcCCCCceEEeCCCCCchHHHhhHHHHHhC--CceEEeeCCCCcEEEEECCCCCCEE
Confidence 73 333332222111 112344455678888888854 3446677777766543333334443
No 200
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=63.90 E-value=80 Score=31.32 Aligned_cols=112 Identities=13% Similarity=0.208 Sum_probs=75.3
Q ss_pred HHHHHHHHHcCCcEEEEcccC-----------ChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVT-----------GANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~-----------sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIar 310 (547)
++.++.+.+.|+|.+-+-+-. ..+.++.++++..+. .+.+++-+-..+.++-+.+. .|.+-||-
T Consensus 55 ~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~--Gl~~~te~~d~~~~~~l~~~---vd~~kIgs 129 (276)
T 1vs1_A 55 REAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEA--GLPVVTEVLDPRHVETVSRY---ADMLQIGA 129 (276)
T ss_dssp HHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCCEEEECCCGGGHHHHHHH---CSEEEECG
T ss_pred HHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHc--CCcEEEecCCHHHHHHHHHh---CCeEEECc
Confidence 455667778999987442111 156777888887665 47888988888888877765 79999997
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHH-hCccEEee
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQ-DGADVVVL 379 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~-~g~D~vmL 379 (547)
+++-- .+ .++.+-+.||||++.|.| ..|-.|+ ..+++++. .|.+-++|
T Consensus 130 ~~~~n------~~-----ll~~~a~~~kPV~lk~G~--~~t~~ei--------~~Ave~i~~~Gn~~i~L 178 (276)
T 1vs1_A 130 RNMQN------FP-----LLREVGRSGKPVLLKRGF--GNTVEEL--------LAAAEYILLEGNWQVVL 178 (276)
T ss_dssp GGTTC------HH-----HHHHHHHHTCCEEEECCT--TCCHHHH--------HHHHHHHHHTTCCCEEE
T ss_pred ccccC------HH-----HHHHHHccCCeEEEcCCC--CCCHHHH--------HHHHHHHHHcCCCeEEE
Confidence 76652 22 344455789999999986 2455566 66666554 36533444
No 201
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=63.68 E-value=11 Score=39.08 Aligned_cols=47 Identities=19% Similarity=0.368 Sum_probs=37.2
Q ss_pred eEEEecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHH
Q psy6272 56 NIMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKL 103 (547)
Q Consensus 56 kIi~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~ 103 (547)
.+-+.+|......+.++.++++|++++-|| +|+..+.+.+ +|+.+|+
T Consensus 98 ~vga~vg~~~~~~~~~~~lieaGvd~I~idta~G~~~~~~~-~I~~ik~ 145 (366)
T 4fo4_A 98 RVGAAVGAAPGNEERVKALVEAGVDVLLIDSSHGHSEGVLQ-RIRETRA 145 (366)
T ss_dssp CCEEECCSCTTCHHHHHHHHHTTCSEEEEECSCTTSHHHHH-HHHHHHH
T ss_pred eEEEEeccChhHHHHHHHHHhCCCCEEEEeCCCCCCHHHHH-HHHHHHH
Confidence 455556655677999999999999999999 9998876666 6666665
No 202
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=63.32 E-value=37 Score=35.16 Aligned_cols=34 Identities=18% Similarity=0.120 Sum_probs=27.0
Q ss_pred CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchH
Q psy6272 337 GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQA 385 (547)
Q Consensus 337 gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta 385 (547)
.+|+|....+- -- .|++.++..|||++|+. ....
T Consensus 267 ~ipvia~GGI~------~~--------~d~~kal~lGA~~v~ig-~~~l 300 (368)
T 3vkj_A 267 DSFLVGSGGIR------SG--------LDAAKAIALGADIAGMA-LPVL 300 (368)
T ss_dssp TCEEEEESSCC------SH--------HHHHHHHHHTCSEEEEC-HHHH
T ss_pred CCcEEEECCCC------CH--------HHHHHHHHcCCCEEEEc-HHHH
Confidence 48999877642 24 89999999999999998 6544
No 203
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=63.28 E-value=21 Score=33.89 Aligned_cols=66 Identities=12% Similarity=0.058 Sum_probs=41.9
Q ss_pred HHHHHHHHcCCcEEEEc-----ccCChhhHHHHHHHHHhcCCCceEEEE--ecCHHHHhhHHHHHhh-cCEEEEcCCccc
Q psy6272 243 HVVDLIVREAVDIIIMS-----SVTGANSIREMRGMLEDHVDRVLILAK--IETLLGMEYMDEIIME-SDGVVLNRIQLA 314 (547)
Q Consensus 243 ~di~~~~~~g~d~I~~s-----fV~sa~di~~~r~~l~~~~~~i~Iiak--IEt~~av~nldeIl~~-~DgImIargDLg 314 (547)
+..+...+.|+|+|.+. |+..... ..+++..+.. ++.+++. |.+++ .+++.+.. +|+|.+++..+.
T Consensus 36 ~~a~~~~~~Gad~i~v~~~d~~~~~~~~~-~~i~~i~~~~--~ipv~v~ggI~~~~---~~~~~l~~Gad~V~lg~~~l~ 109 (244)
T 1vzw_A 36 EAALAWQRSGAEWLHLVDLDAAFGTGDNR-ALIAEVAQAM--DIKVELSGGIRDDD---TLAAALATGCTRVNLGTAALE 109 (244)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHHHTSCCCH-HHHHHHHHHC--SSEEEEESSCCSHH---HHHHHHHTTCSEEEECHHHHH
T ss_pred HHHHHHHHcCCCEEEEecCchhhcCCChH-HHHHHHHHhc--CCcEEEECCcCCHH---HHHHHHHcCCCEEEECchHhh
Confidence 34467778999999873 4555545 4444444332 4666664 66655 35555655 899999976654
No 204
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=63.21 E-value=1.1e+02 Score=29.37 Aligned_cols=114 Identities=14% Similarity=0.146 Sum_probs=61.6
Q ss_pred HHHHHHHHHcCCcEE--EEc-ccCCh----hhHHHHHHHHHhcCCCceEEEEe----------cCHHHHhhHHHHHhh--
Q psy6272 242 KHVVDLIVREAVDII--IMS-SVTGA----NSIREMRGMLEDHVDRVLILAKI----------ETLLGMEYMDEIIME-- 302 (547)
Q Consensus 242 ~~di~~~~~~g~d~I--~~s-fV~sa----~di~~~r~~l~~~~~~i~IiakI----------Et~~av~nldeIl~~-- 302 (547)
.+.++.+++.|+|.| .+. ...+. ++++++.+...+.+ +.++..+ -+. +++++....
T Consensus 102 ~~~v~~a~~~Ga~~v~~~l~~~~~~~~~~~~~~~~v~~~~~~~g--~~viv~~~~~G~~l~~~~~~---~~~~~~a~~a~ 176 (273)
T 2qjg_A 102 VTTVEEAIRMGADAVSIHVNVGSDEDWEAYRDLGMIAETCEYWG--MPLIAMMYPRGKHIQNERDP---ELVAHAARLGA 176 (273)
T ss_dssp CSCHHHHHHTTCSEEEEEEEETSTTHHHHHHHHHHHHHHHHHHT--CCEEEEEEECSTTCSCTTCH---HHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEecCCCCHHHHHHHHHHHHHHHHHcC--CCEEEEeCCCCcccCCCCCH---hHHHHHHHHHH
Confidence 455788999999999 332 21121 23455555555444 4445444 122 344443222
Q ss_pred ---cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEee
Q psy6272 303 ---SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVL 379 (547)
Q Consensus 303 ---~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmL 379 (547)
+|.|.++.+ .+++.+. +.+...++|++.+..+= .++..++ +..+..++..|+|+++.
T Consensus 177 ~~Gad~i~~~~~-----~~~~~l~-------~i~~~~~ipvva~GGi~-~~~~~~~-------~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 177 ELGADIVKTSYT-----GDIDSFR-------DVVKGCPAPVVVAGGPK-TNTDEEF-------LQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp HTTCSEEEECCC-----SSHHHHH-------HHHHHCSSCEEEECCSC-CSSHHHH-------HHHHHHHHHHTCSEEEC
T ss_pred HcCCCEEEECCC-----CCHHHHH-------HHHHhCCCCEEEEeCCC-CCCHHHH-------HHHHHHHHHcCCcEEEe
Confidence 698888842 3433332 22344589999877642 1111111 01156667789999998
Q ss_pred C
Q psy6272 380 T 380 (547)
Q Consensus 380 s 380 (547)
.
T Consensus 237 g 237 (273)
T 2qjg_A 237 G 237 (273)
T ss_dssp C
T ss_pred e
Confidence 6
No 205
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=63.12 E-value=73 Score=31.39 Aligned_cols=118 Identities=16% Similarity=0.095 Sum_probs=74.0
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcch-HHHHHHHHHHHHHHhhhhhhhHH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQ-AHHRVDILKEILKKTESVLWEKQ 407 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Et-a~eaV~~m~~I~~~aE~~~~~~~ 407 (547)
+...|++.|.++.+. .|..... ..+...-..|++.+... ++. -.++++...++.++-. .++-
T Consensus 80 ~A~aa~~~G~~~~iv-----~p~~~~~--------~k~~~~~~~GA~V~~~~-~~~~~~~~~~~a~~~~~~~~-~~~~-- 142 (303)
T 1o58_A 80 IAMIGAKRGHRVILT-----MPETMSV--------ERRKVLKMLGAELVLTP-GELGMKGAVEKALEISRETG-AHML-- 142 (303)
T ss_dssp HHHHHHHHTCCEEEE-----EETTSCH--------HHHHHHHHTTCEEEEEC-GGGHHHHHHHHHHHHHHHHC-CBCC--
T ss_pred HHHHHHHcCCcEEEE-----ECCCCCH--------HHHHHHHHcCCEEEEEC-CCCCHHHHHHHHHHHHHhcC-eEeC--
Confidence 667789999998875 3433223 44555666799998887 542 3366665555544331 1110
Q ss_pred HHHHhhhcCCCCCChhhH---HHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----cCCC-CCEEEEeCchh
Q psy6272 408 VFEDLCALACPPLDPAHS---IVIACVNAALKCQ--AVAIIVITCSGYSAKLVSK----YRPQ-CPILAVSSLGY 472 (547)
Q Consensus 408 ~f~~~~~~~~~~~~~~~~---ia~aav~~a~~~~--a~aIvv~T~sG~tA~~isk----~RP~-~pIiavt~~~~ 472 (547)
.+..++... -...+.|+..+++ .++|++.+-+|.++.-+++ ++|. ..|++|.+...
T Consensus 143 ---------~~~~n~~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~~vigve~~~~ 208 (303)
T 1o58_A 143 ---------NQFENPYNVYSHQFTTGPEILKQMDYQIDAFVAGVGTGGTISGVGRVLKGFFGNGVKIVAVEPAKS 208 (303)
T ss_dssp ---------CTTTCHHHHHHHHHTHHHHHHHHTTTCCSEEEEECSSSHHHHHHHHHHHHHHGGGSEEEEEEETTS
T ss_pred ---------CCCCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeeCCcccHHHHHHHHHHhCCCCCEEEEEecCCC
Confidence 011122111 1233567777774 7999999999999876664 3588 99999998654
No 206
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=63.07 E-value=51 Score=32.26 Aligned_cols=95 Identities=7% Similarity=0.025 Sum_probs=62.4
Q ss_pred HHHHHHhcCC-CceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCC
Q psy6272 270 MRGMLEDHVD-RVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDIL 347 (547)
Q Consensus 270 ~r~~l~~~~~-~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~L 347 (547)
+++.|.+ |. .+..++.+.+++.++.+ ... +|.+++..-|--.+ . ..++. .+..+...|+|+++=+
T Consensus 9 ~k~~l~~-g~~~~g~~~~~~~p~~~e~a---~~~GaD~v~lDlE~~~~~--~---~~~~~-~~~a~~~~~~~~~VRv--- 75 (267)
T 2vws_A 9 FKERLRK-GEVQIGLWLSSTTAYMAEIA---ATSGYDWLLIDGEHAPNT--I---QDLYH-QLQAVAPYASQPVIRP--- 75 (267)
T ss_dssp HHHHHHT-TCCEEEEEECSCCHHHHHHH---HTTCCSEEEEETTTSCCC--H---HHHHH-HHHHHTTSSSEEEEEC---
T ss_pred HHHHHHC-CCCEEEEEEeCCCHHHHHHH---HhCCCCEEEEcCCCCCCC--H---HHHHH-HHHHHHhCCCcEEEEe---
Confidence 5666654 44 46788888877766543 223 69999998885321 1 22222 3344555789988832
Q ss_pred CCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHH
Q psy6272 348 PDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHR 388 (547)
Q Consensus 348 e~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~ea 388 (547)
.-.+- .|+..++..|+|+||+.|-+|+-|+
T Consensus 76 ---~~~~~--------~~i~~~l~~g~~~I~~P~V~s~ee~ 105 (267)
T 2vws_A 76 ---VEGSK--------PLIKQVLDIGAQTLLIPMVDTAEQA 105 (267)
T ss_dssp ---SSCCH--------HHHHHHHHTTCCEEEECCCCSHHHH
T ss_pred ---CCCCH--------HHHHHHHHhCCCEEEeCCCCCHHHH
Confidence 22223 7778888889999999999998873
No 207
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=62.83 E-value=16 Score=35.88 Aligned_cols=76 Identities=9% Similarity=0.022 Sum_probs=53.8
Q ss_pred ChhhHHH-HHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCC-CceEEEEec--C-HHHHhhHHHHHhh-cCEEEEcCC
Q psy6272 238 ADRDKHV-VDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVD-RVLILAKIE--T-LLGMEYMDEIIME-SDGVVLNRI 311 (547)
Q Consensus 238 t~~D~~d-i~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~-~i~IiakIE--t-~~av~nldeIl~~-~DgImIarg 311 (547)
+...+.. .+.+.+.|+|||-.||-.+.++++++++.. +. .++.+.-|- | .++++|+.+.++. +||+.++|.
T Consensus 157 s~~~i~~a~~~a~~~GAD~vkt~~~~~~e~~~~~~~~~---~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsvgra 233 (263)
T 1w8s_A 157 APEIVAYAARIALELGADAMKIKYTGDPKTFSWAVKVA---GKVPVLMSGGPKTKTEEDFLKQVEGVLEAGALGIAVGRN 233 (263)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCSSHHHHHHHHHHT---TTSCEEEECCSCCSSHHHHHHHHHHHHHTTCCEEEESHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhC---CCCeEEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEehh
Confidence 3444444 467889999999999866778888777654 22 344444453 3 5677799888887 799999998
Q ss_pred ccccc
Q psy6272 312 QLAVA 316 (547)
Q Consensus 312 DLg~e 316 (547)
=+.-+
T Consensus 234 I~~~~ 238 (263)
T 1w8s_A 234 VWQRR 238 (263)
T ss_dssp HHTST
T ss_pred hcCCc
Confidence 66554
No 208
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=62.66 E-value=1.3e+02 Score=30.18 Aligned_cols=127 Identities=9% Similarity=0.183 Sum_probs=77.4
Q ss_pred HHHHHHHHcCCcEEEEcc---------------cCChhhHHHHHHHHHhc-CCCceEEEEecCHHHHhhHHHHHhh----
Q psy6272 243 HVVDLIVREAVDIIIMSS---------------VTGANSIREMRGMLEDH-VDRVLILAKIETLLGMEYMDEIIME---- 302 (547)
Q Consensus 243 ~di~~~~~~g~d~I~~sf---------------V~sa~di~~~r~~l~~~-~~~i~IiakIEt~~av~nldeIl~~---- 302 (547)
+.++...+.|+.+|.+== +...+-+.+++...... +.+..|+|..|.. +.+-+||.++-
T Consensus 102 ~~v~~l~~aGaagv~iEDq~~~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~-~~~gldeai~Ra~ay 180 (298)
T 3eoo_A 102 RTIRSFIKAGVGAVHLEDQVGQKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAA-AAEGIDAAIERAIAY 180 (298)
T ss_dssp HHHHHHHHTTCSEEEEECBCCCCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCeEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhh-hhcCHHHHHHHHHhh
Confidence 345666778888886521 22234566776666543 4689999999987 34445555543
Q ss_pred ----cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCC---CC--CcccccccCccchhhHHHHHHhC
Q psy6272 303 ----SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILP---DH--NVEEYSDVSIGDMNDVNSIVQDG 373 (547)
Q Consensus 303 ----~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le---~P--traE~~~~~~~~~~Dv~nav~~g 373 (547)
+|+||+- | .... .++-+.|++..+|+.+ .|++ .| +.+|. -..|
T Consensus 181 ~~AGAD~if~~-~-------~~~~----ee~~~~~~~~~~Pl~~--n~~~~g~tp~~~~~eL--------------~~lG 232 (298)
T 3eoo_A 181 VEAGADMIFPE-A-------MKTL----DDYRRFKEAVKVPILA--NLTEFGSTPLFTLDEL--------------KGAN 232 (298)
T ss_dssp HHTTCSEEEEC-C-------CCSH----HHHHHHHHHHCSCBEE--ECCTTSSSCCCCHHHH--------------HHTT
T ss_pred HhcCCCEEEeC-C-------CCCH----HHHHHHHHHcCCCeEE--EeccCCCCCCCCHHHH--------------HHcC
Confidence 5999985 2 1111 1233445566799865 4554 22 33333 3459
Q ss_pred ccEEeeCCcchHHHHHHHHHHHHHHh
Q psy6272 374 ADVVVLTQSEQAHHRVDILKEILKKT 399 (547)
Q Consensus 374 ~D~vmLsk~Eta~eaV~~m~~I~~~a 399 (547)
+.-+... .-...-+...|.+..+.+
T Consensus 233 v~~v~~~-~~~~raa~~a~~~~~~~i 257 (298)
T 3eoo_A 233 VDIALYC-CGAYRAMNKAALNFYETV 257 (298)
T ss_dssp CCEEEEC-SHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEc-hHHHHHHHHHHHHHHHHH
Confidence 9999997 555556666666666655
No 209
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=62.48 E-value=16 Score=35.43 Aligned_cols=73 Identities=14% Similarity=0.120 Sum_probs=46.5
Q ss_pred CChhhHHHH-HHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEE--Eec--C-HHHHhhHHHHHhh-cCEEEEc
Q psy6272 237 IADRDKHVV-DLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILA--KIE--T-LLGMEYMDEIIME-SDGVVLN 309 (547)
Q Consensus 237 lt~~D~~di-~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~Iia--kIE--t-~~av~nldeIl~~-~DgImIa 309 (547)
++..+...+ +.+.+.|+|+|.+++. -++..++++.... ++.+++ -|- + .++++.+.+.+.. +||+.++
T Consensus 163 ~~~~~~~~~a~~a~~~Gad~i~~~~~---~~~~~l~~i~~~~--~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~vg 237 (273)
T 2qjg_A 163 RDPELVAHAARLGAELGADIVKTSYT---GDIDSFRDVVKGC--PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAVG 237 (273)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCC---SSHHHHHHHHHHC--SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEECC
T ss_pred CCHhHHHHHHHHHHHcCCCEEEECCC---CCHHHHHHHHHhC--CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEee
Confidence 455666666 8899999999999974 4555555555433 455555 232 2 2233336666655 7999999
Q ss_pred CCccc
Q psy6272 310 RIQLA 314 (547)
Q Consensus 310 rgDLg 314 (547)
|+=+.
T Consensus 238 ~~i~~ 242 (273)
T 2qjg_A 238 RNIFQ 242 (273)
T ss_dssp HHHHT
T ss_pred HHhhC
Confidence 86444
No 210
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=62.47 E-value=1.6e+02 Score=31.10 Aligned_cols=137 Identities=13% Similarity=0.123 Sum_probs=79.4
Q ss_pred CCChhhHHHH-HHHHHcCCcEEEEc-ccCChhhHHHHHHHHHhcCCCceEEEEe-cCHHHHhhHHHHHhh-cC--EEEEc
Q psy6272 236 VIADRDKHVV-DLIVREAVDIIIMS-SVTGANSIREMRGMLEDHVDRVLILAKI-ETLLGMEYMDEIIME-SD--GVVLN 309 (547)
Q Consensus 236 ~lt~~D~~di-~~~~~~g~d~I~~s-fV~sa~di~~~r~~l~~~~~~i~IiakI-Et~~av~nldeIl~~-~D--gImIa 309 (547)
.++..++..| +...+.|+|.|=+. +.-++.+...++.+. +.+.+..+.+.+ .+.+++ +..++. .| .++++
T Consensus 57 ~~s~eeKl~Ia~~L~~~Gv~~IEvG~P~asp~d~~~~~~i~-~~~~~~~v~~~~r~~~~di---~~A~~aG~~~V~i~~s 132 (423)
T 3ivs_A 57 FFDTEKKIQIAKALDNFGVDYIELTSPVASEQSRQDCEAIC-KLGLKCKILTHIRCHMDDA---RVAVETGVDGVDVVIG 132 (423)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTSCHHHHHHHHHHH-TSCCSSEEEEEEESCHHHH---HHHHHTTCSEEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeecccCHHHHHHHHHHH-hcCCCCEEEEeeccChhhH---HHHHHcCCCEEEEEee
Confidence 4566776665 45666899999884 456677676676654 345556665532 333333 222322 35 45556
Q ss_pred CCcccc----cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHH-HHHhCccEEeeCCcch
Q psy6272 310 RIQLAV----ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNS-IVQDGADVVVLTQSEQ 384 (547)
Q Consensus 310 rgDLg~----e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~n-av~~g~D~vmLsk~Et 384 (547)
-.|+-. ....+++...-.++++.|+++|..|.+... +.+|++. .+.-+++. +...|+|.+.|. +|
T Consensus 133 ~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~e---da~r~d~-----~~~~~v~~~~~~~Ga~~i~l~--DT 202 (423)
T 3ivs_A 133 TSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSE---DSFRSDL-----VDLLSLYKAVDKIGVNRVGIA--DT 202 (423)
T ss_dssp C-------------CHHHHHHHHHHHHHHTTTCEEEEEEE---SGGGSCH-----HHHHHHHHHHHHHCCSEEEEE--ET
T ss_pred ccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEc---cCcCCCH-----HHHHHHHHHHHHhCCCccccC--Cc
Confidence 555432 233455666666789999999999988633 5555444 11144443 456799999996 66
Q ss_pred HH
Q psy6272 385 AH 386 (547)
Q Consensus 385 a~ 386 (547)
.=
T Consensus 203 vG 204 (423)
T 3ivs_A 203 VG 204 (423)
T ss_dssp TS
T ss_pred cC
Confidence 54
No 211
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=62.42 E-value=25 Score=32.55 Aligned_cols=62 Identities=6% Similarity=0.075 Sum_probs=47.7
Q ss_pred EEecCCEEEEee--ccccccCCCccEEEecCCCccc--ccCCCCEEEEec----eeEEEEEEEeCCeEEE
Q psy6272 150 EIAQGANIVLTA--NQLIETKGTVKRLFVDSMELPK--RVIPDDIVYIDR----NIKLKVVEKENNDVHC 211 (547)
Q Consensus 150 ~L~~G~~v~lt~--~~~~~~~~~~~~i~v~~~~~~~--~v~~Gd~I~idD----~I~l~V~~v~~~~v~~ 211 (547)
-.+.|++.+|+. +..|+..+......++...|.. .+++|..+.+.+ .+..+|.+++++.|+.
T Consensus 74 gm~~Ge~~~v~Ipp~~AYG~~~~~lv~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~V~v 143 (169)
T 4dt4_A 74 GLKVGDKTTFSLEPDAAFGVPSPDLIQYFSRREFMDAGEPEIGAIMLFTAMDGSEMPGVIREINGDSITV 143 (169)
T ss_dssp TCCTTCEEEEEECGGGTTCCCCGGGEEEEEGGGGTTTCCCCTTCEEEEECTTSCEEEEEEEEEETTEEEE
T ss_pred CCCCCCEEEEEEChHHhcCCCChHHEEEeCHHHCCCcCCCCCCcEEEEECCCCCEEEEEEEEEcCCEEEE
Confidence 457899888875 4567666777777887777754 589999999975 5789999999997654
No 212
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=62.28 E-value=31 Score=34.69 Aligned_cols=98 Identities=13% Similarity=0.158 Sum_probs=64.0
Q ss_pred HHHHHHHHHcCCcEEEEccc------CCh-hhHHHHHHHHHhcCCCceEEEEec---CHHHHhhHHHHHhh-c-CEEEEc
Q psy6272 242 KHVVDLIVREAVDIIIMSSV------TGA-NSIREMRGMLEDHVDRVLILAKIE---TLLGMEYMDEIIME-S-DGVVLN 309 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV------~sa-~di~~~r~~l~~~~~~i~IiakIE---t~~av~nldeIl~~-~-DgImIa 309 (547)
...+++.++.|+|+|++.=- -|. |-.+-++...+..+.++.+|+.+= |.++++.....-+. + ||+|+.
T Consensus 31 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~ 110 (311)
T 3h5d_A 31 PALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAI 110 (311)
T ss_dssp HHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEc
Confidence 45678899999999886432 223 333444445555567899999874 56777777666665 4 999988
Q ss_pred CCcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 310 RIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 310 rgDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
+-...- .+.+.+...-+.| |.+.+.|+++-
T Consensus 111 ~P~y~~-~s~~~l~~~f~~v---a~a~~lPiilY 140 (311)
T 3h5d_A 111 VPYYNK-PSQEGMYQHFKAI---ADASDLPIIIY 140 (311)
T ss_dssp CCCSSC-CCHHHHHHHHHHH---HHSCSSCEEEE
T ss_pred CCCCCC-CCHHHHHHHHHHH---HHhCCCCEEEE
Confidence 654432 2445555555545 44568999975
No 213
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=62.01 E-value=10 Score=39.19 Aligned_cols=71 Identities=21% Similarity=0.237 Sum_probs=44.5
Q ss_pred HHHHHHHHHcCCcEEEEcc------------cCChhhHHHHHHH----HHhcCC-CceEEEEecCHHHHhhHHHHHhh--
Q psy6272 242 KHVVDLIVREAVDIIIMSS------------VTGANSIREMRGM----LEDHVD-RVLILAKIETLLGMEYMDEIIME-- 302 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sf------------V~sa~di~~~r~~----l~~~~~-~i~IiakIEt~~av~nldeIl~~-- 302 (547)
.++.+.+.+.|+|+|.++. +-+.+.+.++++. +.+.+. ++.||+- -|+.+-.+|++.
T Consensus 222 ~e~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~----GGI~~~~dv~kala 297 (393)
T 2qr6_A 222 YTTALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIAD----GSIENSGDVVKAIA 297 (393)
T ss_dssp HHHHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEEC----SSCCSHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEE----CCCCCHHHHHHHHH
Confidence 4567888899999999975 3333444444444 222333 3888872 344444444443
Q ss_pred --cCEEEEcCCccccc
Q psy6272 303 --SDGVVLNRIQLAVA 316 (547)
Q Consensus 303 --~DgImIargDLg~e 316 (547)
+|++++||.=|...
T Consensus 298 lGA~~V~iG~~~l~~~ 313 (393)
T 2qr6_A 298 CGADAVVLGSPLARAE 313 (393)
T ss_dssp HTCSEEEECGGGGGST
T ss_pred cCCCEEEECHHHHcCC
Confidence 89999999866554
No 214
>3exr_A RMPD (hexulose-6-phosphate synthase); beta barrel, lyase; 1.70A {Streptococcus mutans} SCOP: c.1.2.3 PDB: 3exs_A* 3ext_A
Probab=61.92 E-value=1.1e+02 Score=29.00 Aligned_cols=112 Identities=8% Similarity=0.009 Sum_probs=66.8
Q ss_pred HHHcCCcEEEEcccCChhhHHHHHHHHHhcCCC--ceEEEEecCHHHHhhHHHHHh-hcCEEEEcCCccccc----CChH
Q psy6272 248 IVREAVDIIIMSSVTGANSIREMRGMLEDHVDR--VLILAKIETLLGMEYMDEIIM-ESDGVVLNRIQLAVA----TSVE 320 (547)
Q Consensus 248 ~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~--i~IiakIEt~~av~nldeIl~-~~DgImIargDLg~e----~~~e 320 (547)
+.+.|+|++.+-..-..+.++++++.+.+.|.. ..-+..+-+. ..+.+.+++. -.|-+.+.++-++-. .+.+
T Consensus 78 ~~~~Gad~vtVH~~~g~~~l~~a~~~~~~~g~~~~~~~Vt~lts~-~~~~~~~~~~~~~~~~v~~~a~~~~~~Gvv~s~~ 156 (221)
T 3exr_A 78 NAVRGADWMTCICSATIPTMKAARKAIEDINPDKGEIQVELYGDW-TYDQAQQWLDAGISQAIYHQSRDALLAGETWGEK 156 (221)
T ss_dssp HHTTTCSEEEEETTSCHHHHHHHHHHHHHHCTTTCEEEEECCSSC-CHHHHHHHHHTTCCEEEEECCHHHHHHTCCCCHH
T ss_pred HHHcCCCEEEEeccCCHHHHHHHHHHHHhcCCCcceEEEEEcCCC-CHHHHHHHHcCCHHHHHHHHHHhcCCCccccCHH
Confidence 678999999997766777799999988776632 2233344322 4555667766 356666666655432 2334
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 321 VTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 321 ~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
++..+.+ .| ..+.++.+...+ +| .++..++..|+|.++..
T Consensus 157 e~~~ir~----~~-~~~~~i~v~gGI--~~-------------~~~~~~~~aGad~~VvG 196 (221)
T 3exr_A 157 DLNKVKK----LI-EMGFRVSVTGGL--SV-------------DTLKLFEGVDVFTFIAG 196 (221)
T ss_dssp HHHHHHH----HH-HHTCEEEEESSC--CG-------------GGGGGGTTCCCSEEEEC
T ss_pred HHHHHHH----hh-cCCceEEEECCC--CH-------------HHHHHHHHCCCCEEEEC
Confidence 4443332 22 345565553332 22 23334577799999996
No 215
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=61.32 E-value=41 Score=33.81 Aligned_cols=51 Identities=16% Similarity=0.276 Sum_probs=35.5
Q ss_pred CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHH------HH-HHHHHHHHHHhhhh
Q psy6272 337 GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAH------HR-VDILKEILKKTESV 402 (547)
Q Consensus 337 gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~------ea-V~~m~~I~~~aE~~ 402 (547)
++|||....+- .- .|+..++..|||+|++. ..... +. -+.+..+.++.+..
T Consensus 256 ~ipvia~GGI~------~~--------~d~~kal~~GAd~V~ig-r~~l~~~~~G~~gv~~~~~~l~~el~~~ 313 (332)
T 1vcf_A 256 HLPLVASGGVY------TG--------TDGAKALALGADLLAVA-RPLLRPALEGAERVAAWIGDYLEELRTA 313 (332)
T ss_dssp SSCEEEESSCC------SH--------HHHHHHHHHTCSEEEEC-GGGHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCC------CH--------HHHHHHHHhCCChHhhh-HHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 69999987743 24 89999999999999998 66553 11 14455555555543
No 216
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=61.27 E-value=63 Score=26.76 Aligned_cols=116 Identities=16% Similarity=0.176 Sum_probs=61.5
Q ss_pred CChhhHHHHHHHHHhcCCCceEEEEecCH-HHHhhHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCc
Q psy6272 262 TGANSIREMRGMLEDHVDRVLILAKIETL-LGMEYMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKP 339 (547)
Q Consensus 262 ~sa~di~~~r~~l~~~~~~i~IiakIEt~-~av~nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKP 339 (547)
.+......++.+|.+.+....+ ....+. ++++.+ -.. .|.|++.- +|.-.-|.+-+ +++-......+.|
T Consensus 13 d~~~~~~~l~~~L~~~~~~~~v-~~~~~~~~a~~~l---~~~~~dlii~D~-~l~~~~g~~~~----~~lr~~~~~~~~p 83 (144)
T 3kht_A 13 DNPDDIALIRRVLDRKDIHCQL-EFVDNGAKALYQV---QQAKYDLIILDI-GLPIANGFEVM----SAVRKPGANQHTP 83 (144)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEE-EEESSHHHHHHHH---TTCCCSEEEECT-TCGGGCHHHHH----HHHHSSSTTTTCC
T ss_pred CCHHHHHHHHHHHHhcCCCeeE-EEECCHHHHHHHh---hcCCCCEEEEeC-CCCCCCHHHHH----HHHHhcccccCCC
Confidence 3455666777888776655332 223322 233222 222 58888762 22211121111 1121111125688
Q ss_pred EEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcc-hHHHHHHHHHHHHHHhhh
Q psy6272 340 FLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSE-QAHHRVDILKEILKKTES 401 (547)
Q Consensus 340 vi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~E-ta~eaV~~m~~I~~~aE~ 401 (547)
+++.|. .. +. ..+..+...|++.++.. .- +..+-.+.+.+++++...
T Consensus 84 ii~~s~---~~---~~--------~~~~~~~~~ga~~~l~K-p~~~~~~l~~~i~~~l~~~~~ 131 (144)
T 3kht_A 84 IVILTD---NV---SD--------DRAKQCMAAGASSVVDK-SSNNVTDFYGRIYAIFSYWLT 131 (144)
T ss_dssp EEEEET---TC---CH--------HHHHHHHHTTCSEEEEC-CTTSHHHHHHHHHHHHHHHHH
T ss_pred EEEEeC---CC---CH--------HHHHHHHHcCCCEEEEC-CCCcHHHHHHHHHHHHHHHHh
Confidence 998765 22 23 55677888999999887 66 666666666666655443
No 217
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=61.01 E-value=32 Score=33.07 Aligned_cols=91 Identities=5% Similarity=0.036 Sum_probs=59.5
Q ss_pred HHHHHHHHHcCCcEEEE-----cccCCh----hhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCC
Q psy6272 242 KHVVDLIVREAVDIIIM-----SSVTGA----NSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRI 311 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~-----sfV~sa----~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIarg 311 (547)
.++++.+.+.|+|++.+ .||-+. +-++++|+..+. ..-+-+--++++++ +.++..++. +|+|-+.-
T Consensus 20 ~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G~~~v~~ir~~~~~-~~~~dvhLmv~~p~--~~i~~~~~aGad~itvH~- 95 (228)
T 3ovp_A 20 GAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQLGQ-DPFFDMHMMVSKPE--QWVKPMAVAGANQYTFHL- 95 (228)
T ss_dssp HHHHHHHHHTTCSCEEEEEEBSSSSSCBCBCHHHHHHHHHHHCS-SSCEEEEEECSCGG--GGHHHHHHHTCSEEEEEG-
T ss_pred HHHHHHHHHcCCCEEEEEecCCCcCcccccCHHHHHHHHHhhCC-CCcEEEEEEeCCHH--HHHHHHHHcCCCEEEEcc-
Confidence 35577788899999999 887544 556777665410 11223334788886 457777776 79999862
Q ss_pred cccccCChHHHHHHHHHHHHHHHHcCCcEEEEcC
Q psy6272 312 QLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGD 345 (547)
Q Consensus 312 DLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq 345 (547)
|-+. . -.+.++.++++|+.++++..
T Consensus 96 ----Ea~~-~----~~~~i~~i~~~G~k~gval~ 120 (228)
T 3ovp_A 96 ----EATE-N----PGALIKDIRENGMKVGLAIK 120 (228)
T ss_dssp ----GGCS-C----HHHHHHHHHHTTCEEEEEEC
T ss_pred ----CCch-h----HHHHHHHHHHcCCCEEEEEc
Confidence 2111 1 13467778999999999753
No 218
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=60.85 E-value=1e+02 Score=31.29 Aligned_cols=126 Identities=17% Similarity=0.083 Sum_probs=68.7
Q ss_pred CCChhhHHHH--------HHHHHcCCcEEEEccc-------------CChh---------hH---HHHHHHHHhcCCCce
Q psy6272 236 VIADRDKHVV--------DLIVREAVDIIIMSSV-------------TGAN---------SI---REMRGMLEDHVDRVL 282 (547)
Q Consensus 236 ~lt~~D~~di--------~~~~~~g~d~I~~sfV-------------~sa~---------di---~~~r~~l~~~~~~i~ 282 (547)
.||..|++.+ +.+.+.|+|+|=+..- +... .. .++.+.+.+.- +..
T Consensus 133 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~p 211 (340)
T 3gr7_A 133 EMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGP 211 (340)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCc
Confidence 5788888776 4677899999987543 2211 12 22222232222 567
Q ss_pred EEEEecCHH------HHhhHHHHHhh-----cCEEEEcCCccccc-C--ChHHHHHHHHHHHHH-HHHcCCcEEEEcCCC
Q psy6272 283 ILAKIETLL------GMEYMDEIIME-----SDGVVLNRIQLAVA-T--SVEVTFLAQKMIAAR-CNKQGKPFLVVGDIL 347 (547)
Q Consensus 283 IiakIEt~~------av~nldeIl~~-----~DgImIargDLg~e-~--~~e~v~~~qk~ii~~-c~~~gKPvi~aTq~L 347 (547)
|..||---+ .+++.-++++. +|.|-+.-|.+.-. + +.. .+...++. .+..++||+....+-
T Consensus 212 v~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~----~~~~~~~~ik~~~~iPVi~~GgI~ 287 (340)
T 3gr7_A 212 LFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPG----YQVPFAELIRREADIPTGAVGLIT 287 (340)
T ss_dssp EEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTT----TTHHHHHHHHHHTTCCEEEESSCC
T ss_pred eEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCcc----ccHHHHHHHHHHcCCcEEeeCCCC
Confidence 778885321 12333333333 58888854432211 1 111 11122222 234589999876532
Q ss_pred CCCCcccccccCccchhhHHHHHHhC-ccEEeeC
Q psy6272 348 PDHNVEEYSDVSIGDMNDVNSIVQDG-ADVVVLT 380 (547)
Q Consensus 348 e~PtraE~~~~~~~~~~Dv~nav~~g-~D~vmLs 380 (547)
+ . .|+..++..| +|.|++.
T Consensus 288 ---s---~--------e~a~~~L~~G~aD~V~iG 307 (340)
T 3gr7_A 288 ---S---G--------WQAEEILQNGRADLVFLG 307 (340)
T ss_dssp ---C---H--------HHHHHHHHTTSCSEEEEC
T ss_pred ---C---H--------HHHHHHHHCCCeeEEEec
Confidence 1 2 5566788888 9999998
No 219
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=60.80 E-value=16 Score=39.41 Aligned_cols=50 Identities=16% Similarity=0.279 Sum_probs=41.2
Q ss_pred CCceEEEecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHH
Q psy6272 53 NLTNIMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKL 103 (547)
Q Consensus 53 r~tkIi~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~ 103 (547)
.+-.+-+.+|...+..+.++.|+++|+++.=+| +|+..+.+.+ +++.+|+
T Consensus 243 ~rl~V~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~-~i~~i~~ 293 (511)
T 3usb_A 243 GRLLVGAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVID-KVKEVRA 293 (511)
T ss_dssp SCBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHHH-HHHHHHH
T ss_pred cceeeeeeeeeccchHHHHHHHHhhccceEEecccccchhhhhh-HHHHHHH
Confidence 345667778887788999999999999999999 9998777776 7776665
No 220
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=60.64 E-value=38 Score=34.28 Aligned_cols=95 Identities=15% Similarity=0.232 Sum_probs=55.9
Q ss_pred HHHHHHHcCCcEEEEcccCChh---------------hHHHHHHHH----HhcCCCceEEEEecCHHHHhhHH----HHH
Q psy6272 244 VVDLIVREAVDIIIMSSVTGAN---------------SIREMRGML----EDHVDRVLILAKIETLLGMEYMD----EII 300 (547)
Q Consensus 244 di~~~~~~g~d~I~~sfV~sa~---------------di~~~r~~l----~~~~~~i~IiakIEt~~av~nld----eIl 300 (547)
.++.+++.|+|+|++=-|.+-. +...+...| .+.+.+..|+.| .|.+-++ ++.
T Consensus 127 rl~~~~~kG~DGvflDnvD~y~~~~~~~g~~~~~~~~~~~~~i~~La~~ar~~~P~~~ii~n----NG~~i~~~d~~~l~ 202 (309)
T 2aam_A 127 YLDRVIDQGFKGIYLDRIDSFEYWAQEGVISRRSAARKMINFVLEIAEYVRERKPDMLIIPQ----NGENILDFDDGQLA 202 (309)
T ss_dssp HHHHHHHTTCSEEEEECTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEB----SCGGGGGGCCSHHH
T ss_pred HHHHHHHcCCCeEeecccchhhhccccCCcchhhhHHHHHHHHHHHHHHHHhhCCCcEEEEe----cCHHhhcccHhHHH
Confidence 3568889999999999886532 222222222 444556777665 4666666 777
Q ss_pred hhcCEEEEcCCccc--ccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 301 MESDGVVLNRIQLA--VATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 301 ~~~DgImIargDLg--~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
...||++.----.. -..+.++- .....-+..++++||||+..
T Consensus 203 ~~id~v~~Es~~~~~~~~~~~~e~-~~~~~~l~~~~~~GkpV~~i 246 (309)
T 2aam_A 203 STVSGWAVENLFYLKTIPLEENET-KSRLEYLIRLNRKGKFILSV 246 (309)
T ss_dssp HHCSEEEEESSSEETTEECCHHHH-HHHHHHHHHHHHTTCEEEEE
T ss_pred hhcCEEEeeeEEecCCCCCCHHHH-HHHHHHHHHHHHcCCcEEEE
Confidence 78898876521110 01222222 22233456678889999974
No 221
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=60.55 E-value=95 Score=28.70 Aligned_cols=111 Identities=9% Similarity=0.023 Sum_probs=65.7
Q ss_pred hhHHH-HHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCH---------HHHhhHHHHHhh-cCEEEE
Q psy6272 240 RDKHV-VDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETL---------LGMEYMDEIIME-SDGVVL 308 (547)
Q Consensus 240 ~D~~d-i~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~---------~av~nldeIl~~-~DgImI 308 (547)
.+... .+.+.+.|++++.+ .+.+.++.+++.. ++.++.-+.+. .-.+.+++.+.. +|.|.+
T Consensus 23 ~~~~~~a~~~~~~Ga~~i~~---~~~~~i~~i~~~~-----~~pv~~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~v~l 94 (223)
T 1y0e_A 23 FIMSKMALAAYEGGAVGIRA---NTKEDILAIKETV-----DLPVIGIVKRDYDHSDVFITATSKEVDELIESQCEVIAL 94 (223)
T ss_dssp HHHHHHHHHHHHHTCSEEEE---ESHHHHHHHHHHC-----CSCEEEECBCCCTTCCCCBSCSHHHHHHHHHHTCSEEEE
T ss_pred ccHHHHHHHHHHCCCeeecc---CCHHHHHHHHHhc-----CCCEEeeeccCCCccccccCCcHHHHHHHHhCCCCEEEE
Confidence 34444 44566889999865 5788888888754 23343211110 112345555555 799988
Q ss_pred cCCcccccCChHHHHHHHHHHHHHHHHc--CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 309 NRIQLAVATSVEVTFLAQKMIAARCNKQ--GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 309 argDLg~e~~~e~v~~~qk~ii~~c~~~--gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
+-..+.- +.+.+ .++++.++++ |+++++... | . .++..+...|+|.++++
T Consensus 95 ~~~~~~~--p~~~~----~~~i~~~~~~~~~~~v~~~~~-----t---~--------~e~~~~~~~G~d~i~~~ 146 (223)
T 1y0e_A 95 DATLQQR--PKETL----DELVSYIRTHAPNVEIMADIA-----T---V--------EEAKNAARLGFDYIGTT 146 (223)
T ss_dssp ECSCSCC--SSSCH----HHHHHHHHHHCTTSEEEEECS-----S---H--------HHHHHHHHTTCSEEECT
T ss_pred eeecccC--cccCH----HHHHHHHHHhCCCceEEecCC-----C---H--------HHHHHHHHcCCCEEEeC
Confidence 7544321 10111 3567777777 898876321 2 2 45566788899999985
No 222
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=60.45 E-value=27 Score=34.74 Aligned_cols=140 Identities=12% Similarity=0.124 Sum_probs=77.5
Q ss_pred CCChhhHHH-HHHHHHcCCcEEEEcc-cCC-----hhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCE--
Q psy6272 236 VIADRDKHV-VDLIVREAVDIIIMSS-VTG-----ANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDG-- 305 (547)
Q Consensus 236 ~lt~~D~~d-i~~~~~~g~d~I~~sf-V~s-----a~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~Dg-- 305 (547)
.++..++.. ++...+.|+|.|-+.+ +.. ..|..++...+.+. .++.+.+-+.+.++ ++..++. .|.
T Consensus 23 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~-~~~~~~~l~~~~~~---i~~a~~ag~~~v~ 98 (298)
T 2cw6_A 23 IVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKF-PGINYPVLTPNLKG---FEAAVAAGAKEVV 98 (298)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCC-TTCBCCEECCSHHH---HHHHHHTTCSEEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhC-CCCEEEEEcCCHHh---HHHHHHCCCCEEE
Confidence 356666555 4566779999998854 332 14656666655442 23343333444444 3333433 464
Q ss_pred EEEcCCcc----cccCChHHHHHHHHHHHHHHHHcCCcEEEEcC-CCC--CCCcccccccCccchhhHH-HHHHhCccEE
Q psy6272 306 VVLNRIQL----AVATSVEVTFLAQKMIAARCNKQGKPFLVVGD-ILP--DHNVEEYSDVSIGDMNDVN-SIVQDGADVV 377 (547)
Q Consensus 306 ImIargDL----g~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq-~Le--~PtraE~~~~~~~~~~Dv~-nav~~g~D~v 377 (547)
|+++-.|. -+..+.++....-+++++.|+++|++|-+..- .+. .-+|.+. .++-+++ .+...|+|.+
T Consensus 99 i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~-----~~~~~~~~~~~~~Ga~~i 173 (298)
T 2cw6_A 99 IFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISP-----AKVAEVTKKFYSMGCYEI 173 (298)
T ss_dssp EEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCH-----HHHHHHHHHHHHTTCSEE
T ss_pred EEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCH-----HHHHHHHHHHHHcCCCEE
Confidence 44444443 12345566777777899999999999864211 111 1122222 1124444 3456799999
Q ss_pred eeCCcchHH
Q psy6272 378 VLTQSEQAH 386 (547)
Q Consensus 378 mLsk~Eta~ 386 (547)
.|. +|.=
T Consensus 174 ~l~--DT~G 180 (298)
T 2cw6_A 174 SLG--DTIG 180 (298)
T ss_dssp EEE--ETTS
T ss_pred Eec--CCCC
Confidence 996 5544
No 223
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=60.40 E-value=27 Score=34.66 Aligned_cols=98 Identities=12% Similarity=0.186 Sum_probs=61.7
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhhHHH-HHHHHHhcCCCceEEEEec---CHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANSIRE-MRGMLEDHVDRVLILAKIE---TLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~di~~-~r~~l~~~~~~i~IiakIE---t~~av~nldeIl~~-~DgImIar 310 (547)
...+++.++.|+|+|++. +--|.++=.+ ++...+..+.++.+|+.+= |.++++.....-+. +||+|+.+
T Consensus 25 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~ 104 (291)
T 3a5f_A 25 SELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVIT 104 (291)
T ss_dssp HHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcC
Confidence 455678899999999873 3334444444 4444555566889999874 36666666655554 69998876
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-.+.- .+.+.+...-+.| |.+.+.|+++-
T Consensus 105 P~y~~-~s~~~l~~~f~~i---a~a~~lPiilY 133 (291)
T 3a5f_A 105 PYYNK-TTQKGLVKHFKAV---SDAVSTPIIIY 133 (291)
T ss_dssp CCSSC-CCHHHHHHHC-CT---GGGCCSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 55432 2445555554544 44568999874
No 224
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=60.27 E-value=1.1e+02 Score=29.71 Aligned_cols=101 Identities=17% Similarity=0.276 Sum_probs=59.0
Q ss_pred HHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh----cCEEEEcCCccc------cc
Q psy6272 247 LIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME----SDGVVLNRIQLA------VA 316 (547)
Q Consensus 247 ~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~----~DgImIargDLg------~e 316 (547)
.|.+.|+|+|.+.- +.-....+|++++ ....|-+-+ .+.+|+..+ +|.|.+++---+ ..
T Consensus 107 lA~~~gAdGVHLg~--~dl~~~~~r~~~~---~~~~iG~S~------ht~~Ea~~A~~~GaDyI~vgpvf~T~tK~~~~~ 175 (243)
T 3o63_A 107 IARAAGADVLHLGQ--RDLPVNVARQILA---PDTLIGRST------HDPDQVAAAAAGDADYFCVGPCWPTPTKPGRAA 175 (243)
T ss_dssp HHHHHTCSEEEECT--TSSCHHHHHHHSC---TTCEEEEEE------CSHHHHHHHHHSSCSEEEECCSSCCCC-----C
T ss_pred HHHHhCCCEEEecC--CcCCHHHHHHhhC---CCCEEEEeC------CCHHHHHHHhhCCCCEEEEcCccCCCCCCCcch
Confidence 37788999999874 2334566776653 233333333 344444333 799999872111 13
Q ss_pred CChHHHHHHHHHHHHHHHH--cCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 317 TSVEVTFLAQKMIAARCNK--QGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 317 ~~~e~v~~~qk~ii~~c~~--~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.|++.+..+ +.. .++|++....+ + . .++......|+|++.+.
T Consensus 176 ~gl~~l~~~-------~~~~~~~iPvvAiGGI----~---~--------~ni~~~~~aGa~gvav~ 219 (243)
T 3o63_A 176 PGLGLVRVA-------AELGGDDKPWFAIGGI----N---A--------QRLPAVLDAGARRIVVV 219 (243)
T ss_dssp CCHHHHHHH-------HTC---CCCEEEESSC----C---T--------TTHHHHHHTTCCCEEES
T ss_pred hhHHHHHHH-------HHhccCCCCEEEecCC----C---H--------HHHHHHHHcCCCEEEEe
Confidence 344433322 222 37999887663 2 2 55666778899999986
No 225
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=60.03 E-value=1e+02 Score=30.38 Aligned_cols=96 Identities=9% Similarity=0.080 Sum_probs=60.1
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhhHHHHHH-HHHhcCCCceEEEEec---CHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANSIREMRG-MLEDHVDRVLILAKIE---TLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~di~~~r~-~l~~~~~~i~IiakIE---t~~av~nldeIl~~-~DgImIar 310 (547)
.+.+++.++.|+|+|++. +--|.++=.++-+ ..+..+. +|+.+= |.++++.....-+. +||+|+-+
T Consensus 22 ~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g---vi~Gvg~~~t~~ai~la~~A~~~Gadavlv~~ 98 (286)
T 2r91_A 22 ANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARR---VIVQVASLNADEAIALAKYAESRGAEAVASLP 98 (286)
T ss_dssp HHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSS---EEEECCCSSHHHHHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC---EEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 455678899999999873 3334444444444 4444333 888764 46777666655554 69999976
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-...--.+.+.+...-+.| |.+.+.|+++-
T Consensus 99 P~y~~~~s~~~l~~~f~~v---a~a~~lPiilY 128 (286)
T 2r91_A 99 PYYFPRLSERQIAKYFRDL---CSAVSIPVFLY 128 (286)
T ss_dssp SCSSTTCCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CcCCCCCCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 6553212456666655555 45568999874
No 226
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=60.00 E-value=26 Score=35.01 Aligned_cols=98 Identities=12% Similarity=0.071 Sum_probs=62.5
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCCh-hhHHHHHHHHHhcCCCceEEEEe---cCHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGA-NSIREMRGMLEDHVDRVLILAKI---ETLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa-~di~~~r~~l~~~~~~i~IiakI---Et~~av~nldeIl~~-~DgImIar 310 (547)
...+++.++.|+|+|++. +--|. |-.+-++...+..+.++.||+-+ -|.++++.....-+. +||+|+-+
T Consensus 28 ~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~ 107 (300)
T 3eb2_A 28 GRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGILAIL 107 (300)
T ss_dssp HHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred HHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 345678899999998753 22233 33333444455556788888876 367777776666655 79999876
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-...- .+.+.+...-+.| |.+.+.|+++-
T Consensus 108 P~y~~-~~~~~l~~~f~~v---a~a~~lPiilY 136 (300)
T 3eb2_A 108 EAYFP-LKDAQIESYFRAI---ADAVEIPVVIY 136 (300)
T ss_dssp CCSSC-CCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHH---HHHCCCCEEEE
Confidence 55432 3456666555555 45568999975
No 227
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=59.43 E-value=68 Score=32.78 Aligned_cols=97 Identities=7% Similarity=0.013 Sum_probs=62.8
Q ss_pred HHHHHHHHcCCcEEEEc------ccCChhhHHHHHHHHHhcCCCceEEEEec---CHHHHhhHHHHHhh-cCEEEEcCCc
Q psy6272 243 HVVDLIVREAVDIIIMS------SVTGANSIREMRGMLEDHVDRVLILAKIE---TLLGMEYMDEIIME-SDGVVLNRIQ 312 (547)
Q Consensus 243 ~di~~~~~~g~d~I~~s------fV~sa~di~~~r~~l~~~~~~i~IiakIE---t~~av~nldeIl~~-~DgImIargD 312 (547)
..+++.++.|+|+|++. +--|.++-.++-+. ..+.++.||+.+= |.++++.....-+. +||+|+-+-.
T Consensus 51 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~--~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~ 128 (344)
T 2hmc_A 51 RKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER--LVKAGIPVIVGTGAVNTASAVAHAVHAQKVGAKGLMVIPRV 128 (344)
T ss_dssp HHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH--HHHTTCCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCC
T ss_pred HHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH--HhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCc
Confidence 45678899999998873 44555555555555 3345788999874 46677666655554 7999997665
Q ss_pred ccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 313 LAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 313 Lg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
+.--.+.+.+...-+.|.++ +.+.|+++-
T Consensus 129 y~~~~s~~~l~~~f~~IA~a--a~~lPiilY 157 (344)
T 2hmc_A 129 LSRGSVIAAQKAHFKAILSA--APEIPAVIY 157 (344)
T ss_dssp SSSTTCHHHHHHHHHHHHHH--STTSCEEEE
T ss_pred cCCCCCHHHHHHHHHHHHhh--CCCCcEEEE
Confidence 53212445666555555431 458999874
No 228
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=59.40 E-value=64 Score=29.47 Aligned_cols=101 Identities=15% Similarity=0.160 Sum_probs=56.2
Q ss_pred HHHHHHHHHcCCcEEEEccc-CChhh----HHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccc
Q psy6272 242 KHVVDLIVREAVDIIIMSSV-TGANS----IREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAV 315 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV-~sa~d----i~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~ 315 (547)
.+.++.+++.|+|+|.+-+- .+.++ ++++++.... ..+.++.. +.++...+. +|+|.++-+|+.
T Consensus 29 ~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~l~~~~~~--~~v~v~v~-------~~~~~a~~~gad~v~l~~~~~~- 98 (215)
T 1xi3_A 29 VESVREALEGGATAIQMRIKNAPTREMYEIGKTLRQLTRE--YDALFFVD-------DRVDVALAVDADGVQLGPEDMP- 98 (215)
T ss_dssp HHHHHHHHHTTCSEEEECCCSCCHHHHHHHHHHHHHHHHH--TTCEEEEE-------SCHHHHHHHTCSEEEECTTSCC-
T ss_pred HHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHHHHH--cCCeEEEc-------ChHHHHHHcCCCEEEECCccCC-
Confidence 46688899999999987532 12322 3333443332 24445442 344444444 799999866664
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 316 ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 316 e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.+ .+++ .. .++.+++.+. |. .++..+...|+|.++++
T Consensus 99 ---~~---~~~~-----~~-~~~~~~v~~~-----t~-----------~e~~~~~~~g~d~i~~~ 135 (215)
T 1xi3_A 99 ---IE---VAKE-----IA-PNLIIGASVY-----SL-----------EEALEAEKKGADYLGAG 135 (215)
T ss_dssp ---HH---HHHH-----HC-TTSEEEEEES-----SH-----------HHHHHHHHHTCSEEEEE
T ss_pred ---HH---HHHH-----hC-CCCEEEEecC-----CH-----------HHHHHHHhcCCCEEEEc
Confidence 11 1211 11 3555555322 21 33445667899999985
No 229
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=59.40 E-value=97 Score=30.56 Aligned_cols=97 Identities=11% Similarity=0.038 Sum_probs=60.9
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhhHHHHHHHHHhcCCCceEEEEec---CHHHHhhHHHHHhh-cCEEEEcCC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANSIREMRGMLEDHVDRVLILAKIE---TLLGMEYMDEIIME-SDGVVLNRI 311 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~di~~~r~~l~~~~~~i~IiakIE---t~~av~nldeIl~~-~DgImIarg 311 (547)
...+++.++.|+|+|++. +--|.++=.++-+..-+.... +|+.+= |.++++.....-+. +||+|+-+-
T Consensus 23 ~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 100 (288)
T 2nuw_A 23 KTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSP 100 (288)
T ss_dssp HHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 355678899999999873 344455555554444333223 888764 46677666655554 699998766
Q ss_pred cccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 312 QLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 312 DLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
.+.--.+.+.+...-+.| |.+.+.|+++-
T Consensus 101 ~y~~~~s~~~l~~~f~~v---a~a~~lPiilY 129 (288)
T 2nuw_A 101 YYFPRLPEKFLAKYYEEI---ARISSHSLYIY 129 (288)
T ss_dssp CSSCSCCHHHHHHHHHHH---HHHCCSCEEEE
T ss_pred cCCCCCCHHHHHHHHHHH---HHhcCCCEEEE
Confidence 543212456666665555 45568999874
No 230
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=59.35 E-value=96 Score=30.14 Aligned_cols=112 Identities=11% Similarity=0.065 Sum_probs=64.3
Q ss_pred HHHHHHHcCCcEEEEccc-CChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccc-cCChH
Q psy6272 244 VVDLIVREAVDIIIMSSV-TGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAV-ATSVE 320 (547)
Q Consensus 244 di~~~~~~g~d~I~~sfV-~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~-e~~~e 320 (547)
.+..+...|+|+|.+--. -+ ++++++.+...+.|- ..++-+-+.+-++ ..+.. +|.|-++.-+|.- ..+++
T Consensus 120 qi~~a~~~GAD~VlL~~~~l~-~~l~~l~~~a~~lGl--~~lvev~~~~E~~---~a~~~gad~IGvn~~~l~~~~~dl~ 193 (254)
T 1vc4_A 120 MLEEARAFGASAALLIVALLG-ELTGAYLEEARRLGL--EALVEVHTERELE---IALEAGAEVLGINNRDLATLHINLE 193 (254)
T ss_dssp HHHHHHHTTCSEEEEEHHHHG-GGHHHHHHHHHHHTC--EEEEEECSHHHHH---HHHHHTCSEEEEESBCTTTCCBCTT
T ss_pred HHHHHHHcCCCEEEECccchH-HHHHHHHHHHHHCCC--eEEEEECCHHHHH---HHHHcCCCEEEEccccCcCCCCCHH
Confidence 577899999999987432 12 555555554434443 3334444443332 23332 5888887766541 12223
Q ss_pred HHHHHHHHHHHHHHHc--CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 321 VTFLAQKMIAARCNKQ--GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 321 ~v~~~qk~ii~~c~~~--gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.+.. +....... ++|++....+- | . .|+..... |+|+++..
T Consensus 194 ~~~~----L~~~i~~~~~~~~vIAegGI~---s---~--------~dv~~l~~-Ga~gvlVG 236 (254)
T 1vc4_A 194 TAPR----LGRLARKRGFGGVLVAESGYS---R---K--------EELKALEG-LFDAVLIG 236 (254)
T ss_dssp HHHH----HHHHHHHTTCCSEEEEESCCC---S---H--------HHHHTTTT-TCSEEEEC
T ss_pred HHHH----HHHhCccccCCCeEEEEcCCC---C---H--------HHHHHHHc-CCCEEEEe
Confidence 3322 33333332 68888766632 1 2 77788888 99999996
No 231
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=58.89 E-value=58 Score=32.27 Aligned_cols=116 Identities=17% Similarity=0.101 Sum_probs=71.1
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHhhhhhhhHHH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQV 408 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~aE~~~~~~~~ 408 (547)
+...|++.|.++.+. .|..... .-+...-..|++.+... + +-.++.+...++..+ +..++
T Consensus 69 lA~~a~~~G~~~~i~-----~p~~~~~--------~k~~~~~~~Ga~V~~~~-~-~~~~~~~~a~~~~~~-~~~~~---- 128 (318)
T 2rkb_A 69 AAYAARKLGIPATIV-----LPESTSL--------QVVQRLQGEGAEVQLTG-K-VWDEANLRAQELAKR-DGWEN---- 128 (318)
T ss_dssp HHHHHHHHTCCEEEE-----ECTTCCH--------HHHHHHHHTTCEEEECC-S-SHHHHHHHHHHHHHS-TTEEE----
T ss_pred HHHHHHHcCCCEEEE-----ECCCCcH--------HHHHHHHhcCCEEEEEC-C-CHHHHHHHHHHHHHh-cCCEE----
Confidence 567789999999875 3433222 33444556799988876 4 334665555554432 11111
Q ss_pred HHHhhhcCCCCCCh--hhHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHhc-----CCCCCEEEEeCch
Q psy6272 409 FEDLCALACPPLDP--AHSIVIACVNAALKCQ--AVAIIVITCSGYSAKLVSKY-----RPQCPILAVSSLG 471 (547)
Q Consensus 409 f~~~~~~~~~~~~~--~~~ia~aav~~a~~~~--a~aIvv~T~sG~tA~~isk~-----RP~~pIiavt~~~ 471 (547)
..+..++ ...-...+.|+..+++ .++||+.+-+|.++.-++++ .|...|++|.+..
T Consensus 129 -------~~~~~n~~~~~g~~t~~~Ei~~q~~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~~vi~ve~~~ 193 (318)
T 2rkb_A 129 -------VPPFDHPLIWKGHASLVQELKAVLRTPPGALVLAVGGGGLLAGVVAGLLEVGWQHVPIIAMETHG 193 (318)
T ss_dssp -------CCSSCSHHHHHHHHHHHHHHHHHSSSCCSEEEEECSSSHHHHHHHHHHHHHTCTTSCEEEEEETT
T ss_pred -------eCCCCChhhccchhHHHHHHHHhcCCCCCEEEEeeCCCcHHHHHHHHHHHhCCCCCEEEEEecCC
Confidence 0111122 2222445567777764 69999999999998766653 2889999999864
No 232
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=58.84 E-value=25 Score=31.58 Aligned_cols=62 Identities=8% Similarity=-0.041 Sum_probs=47.0
Q ss_pred EEEecCCEEEEeec--cccccCCCccEEEecCCCcc-cccCCCCEEEEec----eeEEEEEEEeCCeEE
Q psy6272 149 VEIAQGANIVLTAN--QLIETKGTVKRLFVDSMELP-KRVIPDDIVYIDR----NIKLKVVEKENNDVH 210 (547)
Q Consensus 149 i~L~~G~~v~lt~~--~~~~~~~~~~~i~v~~~~~~-~~v~~Gd~I~idD----~I~l~V~~v~~~~v~ 210 (547)
.-++.|++..++.. ..|+..+......++...|. ..+++|+.+.+.+ .+..+|.+++++.|+
T Consensus 55 ~gm~~Ge~~~v~ipp~~aYG~~~~~~v~~v~~~~f~~~~~~~G~~~~~~~~~G~~~~~~V~~v~~~~v~ 123 (151)
T 2kr7_A 55 LKAQIGEWEEVVIAPEEAYGVYESSYLQEVPRDQFEGIELEKGMSVFGQTEDNQTIQAIIKDFSATHVM 123 (151)
T ss_dssp TTCCBTCEEEEEECGGGTTCSSCSCEEEEEEGGGGTTSCCCTTCEEEEEETTTEEEEEEEEEECSSEEE
T ss_pred cCCCCCCEEEEEEecHHHcCCCCcceEEEEcHHHcCCCCCccCCEEEEECCCCCEEEEEEEEECCCEEE
Confidence 34678998888764 56666666777777777762 3689999999975 477889999998765
No 233
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=58.37 E-value=36 Score=34.76 Aligned_cols=117 Identities=17% Similarity=0.158 Sum_probs=71.9
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHhhhhhhhHHH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQV 408 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~aE~~~~~~~~ 408 (547)
+...|++.|.++.+. .|..... .-+...-..|++.+... + +-.++.+...+++++-...++-
T Consensus 108 lA~aa~~~G~~~~iv-----~p~~~~~--------~k~~~~~~~GA~Vv~v~-~-~~~~a~~~a~~l~~~~~~~~~~--- 169 (364)
T 4h27_A 108 AAYAARQLGVPATIV-----VPGTTPA--------LTIERLKNEGATVKVVG-E-LLDEAFELAKALAKNNPGWVYI--- 169 (364)
T ss_dssp HHHHHHHHTCCEEEE-----EETTSCH--------HHHHHHHTTTCEEEEEC-S-STTHHHHHHHHHHHHSTTEEEE---
T ss_pred HHHHHHHhCCceEEE-----ECCCCCH--------HHHHHHHHcCCEEEEEC-C-CHHHHHHHHHHHHHhCCCeEEe---
Confidence 667789999998875 3443333 34445556799988876 4 3336666666655442111111
Q ss_pred HHHhhhcCCCCCCh--hhHHHHHHHHHHHhcC--CcEEEEEcCCchHHHHHHh----cC-CCCCEEEEeCch
Q psy6272 409 FEDLCALACPPLDP--AHSIVIACVNAALKCQ--AVAIIVITCSGYSAKLVSK----YR-PQCPILAVSSLG 471 (547)
Q Consensus 409 f~~~~~~~~~~~~~--~~~ia~aav~~a~~~~--a~aIvv~T~sG~tA~~isk----~R-P~~pIiavt~~~ 471 (547)
.+..++ ...-...+.|+..+++ .++||+.+-+|.+.--+++ +. |+++|++|-+..
T Consensus 170 --------~~~~np~~~~G~~t~~~Ei~~q~~~~~D~vvvpvG~GG~~aGi~~~~k~~~~p~~~vigVe~~~ 233 (364)
T 4h27_A 170 --------PPFDDPLIWEGHASIVKELKETLWEKPGAIALSVGGGGLLCGVVQGLQEVGWGDVPVIAMETFG 233 (364)
T ss_dssp --------CSSCSHHHHHHHTHHHHHHHHHCSSCCSEEEEECSSSHHHHHHHHHHHHTTCTTCCEEEEEETT
T ss_pred --------CCCCCHHHHHHHHHHHHHHHHHhCCCCCEEEEcCCccHHHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 111122 1222234567777774 6999999999998765544 33 889999998753
No 234
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=58.30 E-value=20 Score=37.02 Aligned_cols=94 Identities=15% Similarity=0.158 Sum_probs=56.7
Q ss_pred HHHHHHHHHcCCcEEEEcccC------ChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh----cCEEEEcCC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVT------GANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME----SDGVVLNRI 311 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~------sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~----~DgImIarg 311 (547)
.++.+.+.+.|+|+|.++.-. ....+..+.+.....+.++.||+- -|+.+-.++++. +|+|+|||.
T Consensus 228 ~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~----GGI~~g~Dv~kaLalGA~aV~iGr~ 303 (352)
T 3sgz_A 228 KEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMD----GGVRTGTDVLKALALGARCIFLGRP 303 (352)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEE----SSCCSHHHHHHHHHTTCSEEEESHH
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEE----CCCCCHHHHHHHHHcCCCEEEECHH
Confidence 466888999999999996421 123344444444333457888884 344444444444 899999997
Q ss_pred cccc--cCChH----HHHHHHHHHHHHHHHcCCc
Q psy6272 312 QLAV--ATSVE----VTFLAQKMIAARCNKQGKP 339 (547)
Q Consensus 312 DLg~--e~~~e----~v~~~qk~ii~~c~~~gKP 339 (547)
=|-. ..|.+ .+..+.+++-......|..
T Consensus 304 ~l~~l~~~G~~gv~~~l~~l~~el~~~m~~~G~~ 337 (352)
T 3sgz_A 304 ILWGLACKGEDGVKEVLDILTAELHRCMTLSGCQ 337 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 6621 11222 3445566666666667754
No 235
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=58.24 E-value=1.2e+02 Score=30.22 Aligned_cols=111 Identities=10% Similarity=-0.003 Sum_probs=63.8
Q ss_pred hHHHHHHHHHcCCcEEEE-cccCChhhHHHHHHHHHhc-CC--CceEEEEe--cCHHHHhhHHHHHhh-cCEEEEcCCcc
Q psy6272 241 DKHVVDLIVREAVDIIIM-SSVTGANSIREMRGMLEDH-VD--RVLILAKI--ETLLGMEYMDEIIME-SDGVVLNRIQL 313 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~-sfV~sa~di~~~r~~l~~~-~~--~i~IiakI--Et~~av~nldeIl~~-~DgImIargDL 313 (547)
+.+....+.+.|.-+++. ....+++++.+..+.+.+. +. .+.++..- ..+.-.+.++.+++. +|+|.++-|+
T Consensus 28 ~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~~~p~~v~l~v~~~~~~~~~~~~~~~~~~~g~d~V~~~~g~- 106 (328)
T 2gjl_A 28 RAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELTDRPFGVNLTLLPTQKPVPYAEYRAAIIEAGIRVVETAGND- 106 (328)
T ss_dssp SHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHCSSCCEEEEEECCCSSCCCHHHHHHHHHHTTCCEEEEEESC-
T ss_pred cHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhcCCCeEEEEeccccccCccHHHHHHHHHhcCCCEEEEcCCC-
Confidence 455667777888755554 4555677765443333332 11 23334320 022223445555554 6999987443
Q ss_pred cccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 314 AVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 314 g~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
+ ..+++.++++|+|++... .+ . .++..+...|+|++.+.
T Consensus 107 ----p--------~~~~~~l~~~gi~vi~~v-----~t---~--------~~a~~~~~~GaD~i~v~ 145 (328)
T 2gjl_A 107 ----P--------GEHIAEFRRHGVKVIHKC-----TA---V--------RHALKAERLGVDAVSID 145 (328)
T ss_dssp ----C--------HHHHHHHHHTTCEEEEEE-----SS---H--------HHHHHHHHTTCSEEEEE
T ss_pred ----c--------HHHHHHHHHcCCCEEeeC-----CC---H--------HHHHHHHHcCCCEEEEE
Confidence 2 245667788899998631 12 2 45556788999999995
No 236
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=57.73 E-value=8.6 Score=36.53 Aligned_cols=77 Identities=9% Similarity=-0.019 Sum_probs=53.3
Q ss_pred EEEecCCEEEEeec--cccccCCCccEEEecCCCccc--ccCCCCEEEEec---eeEEEEEEEeCCeEEEEEEeCcEeCC
Q psy6272 149 VEIAQGANIVLTAN--QLIETKGTVKRLFVDSMELPK--RVIPDDIVYIDR---NIKLKVVEKENNDVHCTVIRGGKLMD 221 (547)
Q Consensus 149 i~L~~G~~v~lt~~--~~~~~~~~~~~i~v~~~~~~~--~v~~Gd~I~idD---~I~l~V~~v~~~~v~~~V~~gG~L~s 221 (547)
.-++.|++.+|+.. ..|...+......++...|.. .+++|+.+.+.+ .+..+|++++++.|+ |.-+.-| .
T Consensus 50 ~Gm~vGe~~~v~Ippe~aYGe~~~~lV~~vp~~~f~~~~~~~~G~~~~~~~~~G~~~~~V~~v~~~~V~--vD~NHPL-A 126 (196)
T 2kfw_A 50 EGHEVGDKFDVAVGANDAYGQYDENLVQRVPKDVFMGVDELQVGMRFLAETDQGPVPVEITAVEDDHVV--VDGNHML-A 126 (196)
T ss_dssp SSSCTTCEEEEECSTTTTSSCCCTTTCEEECGGGCCCSSCCCTTCEEEEEETTEEEEEEBCCCCSSSEE--ECCCCTT-S
T ss_pred cCCCCCCEEEEEeCcHHhcCCCChhhEEEEEHHHCCCccCcccCCEEEEECCCCcEEEEEEEEcCCEEE--EeCCCCC-C
Confidence 44678999988764 456666666677777767654 689999999986 566778888888764 3333333 4
Q ss_pred CceeeeC
Q psy6272 222 NQLVTVP 228 (547)
Q Consensus 222 ~Kginlp 228 (547)
.|.++|-
T Consensus 127 Gk~L~F~ 133 (196)
T 2kfw_A 127 GQNLKFN 133 (196)
T ss_dssp CCCCEEE
T ss_pred CCeEEEE
Confidence 5555553
No 237
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=57.37 E-value=92 Score=35.32 Aligned_cols=105 Identities=11% Similarity=0.035 Sum_probs=73.6
Q ss_pred CChhhHHHHHHHHHcCCcEEEE-------------------cccCCh--hhHHHHHHHHHhcCCCceEEEEecCHHHHh-
Q psy6272 237 IADRDKHVVDLIVREAVDIIIM-------------------SSVTGA--NSIREMRGMLEDHVDRVLILAKIETLLGME- 294 (547)
Q Consensus 237 lt~~D~~di~~~~~~g~d~I~~-------------------sfV~sa--~di~~~r~~l~~~~~~i~IiakIEt~~av~- 294 (547)
=++.-+..|+||.++|.++|.+ +|++-- -|+.++.+|-.++ .+.|+.-.|+..++.
T Consensus 369 nte~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sK--GV~iilw~~t~~~~~n 446 (738)
T 2d73_A 369 NTANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARK--GIKMMMHHETSASVRN 446 (738)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHT--TCEEEEEEECTTBHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhC--CCEEEEEEcCCCchhh
Confidence 3455688899999999999999 221111 2599999999875 689999999988544
Q ss_pred ---hHHHHHhh-----cCEEEEc-------CCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCC
Q psy6272 295 ---YMDEIIME-----SDGVVLN-------RIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDI 346 (547)
Q Consensus 295 ---nldeIl~~-----~DgImIa-------rgDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~ 346 (547)
++|+.++. ..||-++ |+|. .-+ ..+.....++++.|.+++.-|.+....
T Consensus 447 ~e~~~d~~f~~~~~~Gv~GVKvdF~g~~~~r~~~--h~~-Q~~v~~Y~~i~~~AA~~~LmVnfHg~~ 510 (738)
T 2d73_A 447 YERHMDKAYQFMADNGYNSVKSGYVGNIIPRGEH--HYG-QWMNNHYLYAVKKAADYKIMVNAHEAT 510 (738)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECCSSCBSTTCC--TTS-HHHHHHHHHHHHHHHHTTCEEEETTSC
T ss_pred HHHHHHHHHHHHHHcCCCEEEeCccccCcCCccc--ccc-hHHHHHHHHHHHHHHHcCcEEEccCCc
Confidence 45656555 3677654 3332 111 445566667999999999988886443
No 238
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=57.34 E-value=1.2e+02 Score=30.35 Aligned_cols=116 Identities=16% Similarity=0.139 Sum_probs=73.1
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHhhhhhhhHHH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQV 408 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~aE~~~~~~~~ 408 (547)
+...|++.|.++.+. .|..... ..+...-..|++.+... +. -.++++...++.++-.. ++.
T Consensus 103 lA~aa~~~G~~~~iv-----~p~~~~~--------~k~~~~~~~GA~V~~~~-~~-~~~~~~~a~~l~~~~~~-~~~--- 163 (342)
T 2gn0_A 103 VSLSCAMLGIDGKVV-----MPKGAPK--------SKVAATCDYSAEVVLHG-DN-FNDTIAKVSEIVETEGR-IFI--- 163 (342)
T ss_dssp HHHHHHHHTCCEEEE-----ECTTSCH--------HHHHHHHHHSCEEEECC-SS-HHHHHHHHHHHHHHHCC-EEC---
T ss_pred HHHHHHHcCCCEEEE-----ECCCCCH--------HHHHHHHHcCCEEEEEC-CC-HHHHHHHHHHHHHhcCC-EEe---
Confidence 567789999998875 3433323 44555666799988766 43 33666655555544211 110
Q ss_pred HHHhhhcCCCCCCh--hhHHHHHHHHHHHhc-CCcEEEEEcCCchHHHHHHh----cCCCCCEEEEeCch
Q psy6272 409 FEDLCALACPPLDP--AHSIVIACVNAALKC-QAVAIIVITCSGYSAKLVSK----YRPQCPILAVSSLG 471 (547)
Q Consensus 409 f~~~~~~~~~~~~~--~~~ia~aav~~a~~~-~a~aIvv~T~sG~tA~~isk----~RP~~pIiavt~~~ 471 (547)
.+..++ ...-...+.|+..++ ..++||+.+-+|.++.-+++ ..|...|++|.+..
T Consensus 164 --------~~~~n~~~~~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~p~~~vigve~~~ 225 (342)
T 2gn0_A 164 --------PPYDDPKVIAGQGTIGLEIMEDLYDVDNVIVPIGGGGLIAGIAIAIKSINPTIKVIGVQAEN 225 (342)
T ss_dssp --------CSSSSHHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEETT
T ss_pred --------CCCCCHHHHHHHHHHHHHHHHHcCCCCEEEEecCCchHHHHHHHHHHHhCCCCeEEEEEeCC
Confidence 011111 122233466777776 48999999999999776554 47999999999863
No 239
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=57.16 E-value=55 Score=30.26 Aligned_cols=88 Identities=11% Similarity=0.016 Sum_probs=52.3
Q ss_pred HHHHHHHHHcCCcEEEE-----cccCC----hhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCC
Q psy6272 242 KHVVDLIVREAVDIIIM-----SSVTG----ANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRI 311 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~-----sfV~s----a~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIarg 311 (547)
.+.++.+.+.|+|++.+ +|+++ .+.++++++.. +..+.+-.++.+.+ +.++...+. +|+|.+.-+
T Consensus 19 ~~~~~~~~~~G~~~i~~~~~dg~~~~~~~~g~~~i~~i~~~~---~~~~~v~l~v~d~~--~~i~~~~~~gad~v~vh~~ 93 (220)
T 2fli_A 19 ASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHS---KLVFDCHLMVVDPE--RYVEAFAQAGADIMTIHTE 93 (220)
T ss_dssp HHHHHHHHHTTCCEEEEEEEBSSSSSCBCBCHHHHHHHHTTC---CSEEEEEEESSSGG--GGHHHHHHHTCSEEEEEGG
T ss_pred HHHHHHHHHcCCCEEEEEeecCCCCCccccCHHHHHHHHHhC---CCCEEEEEeecCHH--HHHHHHHHcCCCEEEEccC
Confidence 46678888999998533 44565 44555554432 33455666777653 235555555 799988632
Q ss_pred cccccCChHHHHHHHHHHHHHHHHcCCcEEEEc
Q psy6272 312 QLAVATSVEVTFLAQKMIAARCNKQGKPFLVVG 344 (547)
Q Consensus 312 DLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aT 344 (547)
.. + .. ...++.++++|++++++.
T Consensus 94 ~~--~----~~----~~~~~~~~~~g~~i~~~~ 116 (220)
T 2fli_A 94 ST--R----HI----HGALQKIKAAGMKAGVVI 116 (220)
T ss_dssp GC--S----CH----HHHHHHHHHTTSEEEEEE
T ss_pred cc--c----cH----HHHHHHHHHcCCcEEEEE
Confidence 21 1 11 134555677899888875
No 240
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=57.15 E-value=84 Score=29.12 Aligned_cols=108 Identities=14% Similarity=0.204 Sum_probs=60.7
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHH----HhhHHHHHhh-----cCEEEEcCCc
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLG----MEYMDEIIME-----SDGVVLNRIQ 312 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~a----v~nldeIl~~-----~DgImIargD 312 (547)
...++.+.+.|+|+|.+..--..+-++.+++ .+ .+.+.+..-+... .+.++.++.. .||+.+.+.
T Consensus 68 ~~~v~~~~~~Gad~vtvh~~~g~~~i~~~~~----~~-gv~vl~~t~~~~~~~~~~~~v~~~~~~a~~~G~~G~~~~~~- 141 (208)
T 2czd_A 68 RLIARKVFGAGADYVIVHTFVGRDSVMAVKE----LG-EIIMVVEMSHPGALEFINPLTDRFIEVANEIEPFGVIAPGT- 141 (208)
T ss_dssp HHHHHHHHHTTCSEEEEESTTCHHHHHHHHT----TS-EEEEECCCCSGGGGTTTGGGHHHHHHHHHHHCCSEEECCCS-
T ss_pred HHHHHHHHhcCCCEEEEeccCCHHHHHHHHH----hC-CcEEEEecCCcchhhHHHHHHHHHHHHHHHhCCcEEEECCC-
Confidence 4467778899999998887666555544443 23 4455555432221 3445555444 377765532
Q ss_pred ccccCChHHHHHHHHHHHHHHHHcC-CcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 313 LAVATSVEVTFLAQKMIAARCNKQG-KPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 313 Lg~e~~~e~v~~~qk~ii~~c~~~g-KPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.++++..+.+ .| + .++++...+ . ++- .++..++..|+|.+...
T Consensus 142 -----~~~~i~~lr~----~~---~~~~~iv~gGI--~---~~g--------~~~~~~~~aGad~vvvG 185 (208)
T 2czd_A 142 -----RPERIGYIRD----RL---KEGIKILAPGI--G---AQG--------GKAKDAVKAGADYIIVG 185 (208)
T ss_dssp -----STHHHHHHHH----HS---CTTCEEEECCC--C---SST--------THHHHHHHHTCSEEEEC
T ss_pred -----ChHHHHHHHH----hC---CCCeEEEECCC--C---CCC--------CCHHHHHHcCCCEEEEC
Confidence 2345533332 22 4 356653332 1 223 36677788899999986
No 241
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=57.02 E-value=1.6e+02 Score=29.39 Aligned_cols=110 Identities=14% Similarity=0.102 Sum_probs=63.3
Q ss_pred hHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEE--ecCHHHHhhHHHHHhh-cCEEEEcCCcccccC
Q psy6272 241 DKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAK--IETLLGMEYMDEIIME-SDGVVLNRIQLAVAT 317 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~Iiak--IEt~~av~nldeIl~~-~DgImIargDLg~e~ 317 (547)
+.+....+.+.|.-+++.+---+++.+.+..+.+.+..+. .+.+. +-++..-+.++.+++. +|+|.++-|+
T Consensus 39 ~~~la~av~~aGglG~i~~~~~~~~~l~~~i~~i~~~~~~-p~gVnl~~~~~~~~~~~~~~~~~g~d~V~l~~g~----- 112 (326)
T 3bo9_A 39 TPTLAAAVSEAGGLGIIGSGAMKPDDLRKAISELRQKTDK-PFGVNIILVSPWADDLVKVCIEEKVPVVTFGAGN----- 112 (326)
T ss_dssp CHHHHHHHHHTTSBEEEECTTCCHHHHHHHHHHHHTTCSS-CEEEEEETTSTTHHHHHHHHHHTTCSEEEEESSC-----
T ss_pred CHHHHHHHHhCCCcEEeCCCCCCHHHHHHHHHHHHHhcCC-CEEEEEeccCCCHHHHHHHHHHCCCCEEEECCCC-----
Confidence 4556677778887666644333666665554444433221 22222 2233333334444444 6999987653
Q ss_pred ChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 318 SVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 318 ~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
|. .+++.+++.|+|++... .+ . .++..+...|+|++.+.
T Consensus 113 p~--------~~~~~l~~~g~~v~~~v-----~s---~--------~~a~~a~~~GaD~i~v~ 151 (326)
T 3bo9_A 113 PT--------KYIRELKENGTKVIPVV-----AS---D--------SLARMVERAGADAVIAE 151 (326)
T ss_dssp CH--------HHHHHHHHTTCEEEEEE-----SS---H--------HHHHHHHHTTCSCEEEE
T ss_pred cH--------HHHHHHHHcCCcEEEEc-----CC---H--------HHHHHHHHcCCCEEEEE
Confidence 31 24566778899998742 22 2 45566778899999995
No 242
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=56.49 E-value=17 Score=37.41 Aligned_cols=68 Identities=16% Similarity=0.244 Sum_probs=41.7
Q ss_pred HHHHHHHHHcCCcEEEEcccCCh------hhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh----cCEEEEcCC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGA------NSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME----SDGVVLNRI 311 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa------~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~----~DgImIarg 311 (547)
.++++.+.+.|+|+|.++.--.. .++..+.+..+....++.||+- -|+.+-+++.+. +|+++|||.
T Consensus 236 ~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~----GGI~~~~D~~k~l~~GAdaV~iGr~ 311 (370)
T 1gox_A 236 AEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLD----GGVRRGTDVFKALALGAAGVFIGRP 311 (370)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEE----SSCCSHHHHHHHHHHTCSEEEECHH
T ss_pred HHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEE----CCCCCHHHHHHHHHcCCCEEeecHH
Confidence 46788999999999999652111 3444444444333446788873 333333333333 899999996
Q ss_pred cc
Q psy6272 312 QL 313 (547)
Q Consensus 312 DL 313 (547)
=|
T Consensus 312 ~l 313 (370)
T 1gox_A 312 VV 313 (370)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 243
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=56.32 E-value=38 Score=34.99 Aligned_cols=100 Identities=19% Similarity=0.142 Sum_probs=57.8
Q ss_pred CCCChhhHHHH-HHHHHcCCcEEEEcccCCh-----------------------hhHHHHHHHHHhcCCCceEEE--Eec
Q psy6272 235 PVIADRDKHVV-DLIVREAVDIIIMSSVTGA-----------------------NSIREMRGMLEDHVDRVLILA--KIE 288 (547)
Q Consensus 235 p~lt~~D~~di-~~~~~~g~d~I~~sfV~sa-----------------------~di~~~r~~l~~~~~~i~Iia--kIE 288 (547)
|.+++.|..++ +.+.+.|+|+|.++.-... ..++.++..-+..+.++.||+ -|.
T Consensus 229 p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~ 308 (367)
T 3zwt_A 229 PDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVS 308 (367)
T ss_dssp SCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCC
Confidence 34566666555 5667899999998743210 012333333333344677877 466
Q ss_pred CHHHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCC
Q psy6272 289 TLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGK 338 (547)
Q Consensus 289 t~~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gK 338 (547)
|.+-.... |..-+|+|||||+=|-- ++.-+..+.+.+-....+.|.
T Consensus 309 s~~da~~~--l~~GAd~V~vgra~l~~--gP~~~~~i~~~l~~~m~~~G~ 354 (367)
T 3zwt_A 309 SGQDALEK--IRAGASLVQLYTALTFW--GPPVVGKVKRELEALLKEQGF 354 (367)
T ss_dssp SHHHHHHH--HHHTCSEEEESHHHHHH--CTHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHH--HHcCCCEEEECHHHHhc--CcHHHHHHHHHHHHHHHHcCC
Confidence 65443322 22338999999987521 344455566666666666664
No 244
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=56.16 E-value=94 Score=32.04 Aligned_cols=121 Identities=7% Similarity=0.050 Sum_probs=65.3
Q ss_pred CCChhhHHHH--------HHHHHcCCcEEEEc-------------ccCChhh----------------HHHHHHHHHhcC
Q psy6272 236 VIADRDKHVV--------DLIVREAVDIIIMS-------------SVTGANS----------------IREMRGMLEDHV 278 (547)
Q Consensus 236 ~lt~~D~~di--------~~~~~~g~d~I~~s-------------fV~sa~d----------------i~~~r~~l~~~~ 278 (547)
.||..|++.+ +.+.+.|+|+|=+. ..+...| ++.+|+.+ +
T Consensus 155 ~mt~~eI~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~av---g 231 (377)
T 2r14_A 155 ALETDEIPGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIENRARFPLEVVDAVAEVF---G 231 (377)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHH---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhhchHHHHHHHHHHHHHc---C
Confidence 4677776655 35678999999883 3332222 33333333 4
Q ss_pred CCceEEEEecCH---------HHHhhHHHHHhh-----cCEEEEcCCcccccCChHHHHHHHHHHHH-HHHHcCCcEEEE
Q psy6272 279 DRVLILAKIETL---------LGMEYMDEIIME-----SDGVVLNRIQLAVATSVEVTFLAQKMIAA-RCNKQGKPFLVV 343 (547)
Q Consensus 279 ~~i~IiakIEt~---------~av~nldeIl~~-----~DgImIargDLg~e~~~e~v~~~qk~ii~-~c~~~gKPvi~a 343 (547)
.+ .|..||-.. ...+..-++++. +|.|=+..|...-..+.. +...++ ..+..++||+..
T Consensus 232 ~~-~v~vrls~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~-----~~~~~~~ik~~~~iPvi~~ 305 (377)
T 2r14_A 232 PE-RVGIRLTPFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITY-----PEGFREQMRQRFKGGLIYC 305 (377)
T ss_dssp GG-GEEEEECTTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CC-----CTTHHHHHHHHCCSEEEEE
T ss_pred CC-cEEEEeccccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcc-----hHHHHHHHHHHCCCCEEEE
Confidence 44 788888321 112333333333 588877655321100000 111222 233568999987
Q ss_pred cCCCCCCCcccccccCccchhhHHHHHHhC-ccEEeeC
Q psy6272 344 GDILPDHNVEEYSDVSIGDMNDVNSIVQDG-ADVVVLT 380 (547)
Q Consensus 344 Tq~Le~PtraE~~~~~~~~~~Dv~nav~~g-~D~vmLs 380 (547)
..+ + . .|+..++..| +|+|++.
T Consensus 306 Ggi----~---~--------~~a~~~l~~g~aD~V~ig 328 (377)
T 2r14_A 306 GNY----D---A--------GRAQARLDDNTADAVAFG 328 (377)
T ss_dssp SSC----C---H--------HHHHHHHHTTSCSEEEES
T ss_pred CCC----C---H--------HHHHHHHHCCCceEEeec
Confidence 652 2 2 5566788888 9999998
No 245
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=56.09 E-value=87 Score=30.59 Aligned_cols=137 Identities=13% Similarity=0.167 Sum_probs=77.9
Q ss_pred CCCCcCCCCCChhh-HHHHHHHHHcCCcEEEE--cccCChhhHHHHHH---HHHhcCCCceEEEEecCH-----------
Q psy6272 228 PRVTFNLPVIADRD-KHVVDLIVREAVDIIIM--SSVTGANSIREMRG---MLEDHVDRVLILAKIETL----------- 290 (547)
Q Consensus 228 p~~~~~lp~lt~~D-~~di~~~~~~g~d~I~~--sfV~sa~di~~~r~---~l~~~~~~i~IiakIEt~----------- 290 (547)
|.+++++..-|.+| ...++.+...|+|.|=+ =|-++.+++..+.+ .|.+.-.++.+|.-+=|.
T Consensus 20 PkIcvpl~~~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~~~~ 99 (258)
T 4h3d_A 20 PKICVPIIGKNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRD 99 (258)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCCCHH
T ss_pred CEEEEEeCCCCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCCCHH
Confidence 55566665555554 34556777889998754 23344444444443 343333456677755432
Q ss_pred HHHhhHHHHHhh--cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCC-CCCcccccccCccchhhHH
Q psy6272 291 LGMEYMDEIIME--SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILP-DHNVEEYSDVSIGDMNDVN 367 (547)
Q Consensus 291 ~av~nldeIl~~--~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le-~PtraE~~~~~~~~~~Dv~ 367 (547)
+-++-+.+++.. +|.| |+-...+. ...++++..+++.|..+|.+-+=++ .|+..|+ ..-+.
T Consensus 100 ~~~~ll~~~~~~~~~d~i-----DvEl~~~~----~~~~~l~~~a~~~~~kiI~S~Hdf~~TP~~~el-------~~~~~ 163 (258)
T 4h3d_A 100 YYTTLNKEISNTGLVDLI-----DVELFMGD----EVIDEVVNFAHKKEVKVIISNHDFNKTPKKEEI-------VSRLC 163 (258)
T ss_dssp HHHHHHHHHHHTTCCSEE-----EEEGGGCH----HHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHH-------HHHHH
T ss_pred HHHHHHHHHHhcCCchhh-----HHhhhccH----HHHHHHHHHHHhCCCEEEEEEecCCCCCCHHHH-------HHHHH
Confidence 122223333332 3443 22233332 3456788889999999999988777 7777666 13344
Q ss_pred HHHHhCccEEeeC
Q psy6272 368 SIVQDGADVVVLT 380 (547)
Q Consensus 368 nav~~g~D~vmLs 380 (547)
.+...|+|.+=+.
T Consensus 164 ~~~~~gaDIvKia 176 (258)
T 4h3d_A 164 RMQELGADLPKIA 176 (258)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHHHhCCCEEEEE
Confidence 5566788876554
No 246
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=56.06 E-value=1.1e+02 Score=30.23 Aligned_cols=97 Identities=11% Similarity=0.064 Sum_probs=59.4
Q ss_pred HHHHHHHHHcCCcEEEEc------ccCChhhHHHHHHHHHhcCCCceEEEEec---CHHHHhhHHHHHhh-cCEEEEcCC
Q psy6272 242 KHVVDLIVREAVDIIIMS------SVTGANSIREMRGMLEDHVDRVLILAKIE---TLLGMEYMDEIIME-SDGVVLNRI 311 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s------fV~sa~di~~~r~~l~~~~~~i~IiakIE---t~~av~nldeIl~~-~DgImIarg 311 (547)
...+++.++.|+|+|++. +--|.++=.++-+..-+.... +|+.+= |.++++.....-+. +||+|+-+-
T Consensus 23 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g--viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P 100 (293)
T 1w3i_A 23 KIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK--IIFQVGGLNLDDAIRLAKLSKDFDIVGIASYAP 100 (293)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC--EEEECCCSCHHHHHHHHHHGGGSCCSEEEEECC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC--EEEecCCCCHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 455678899999999873 334445555554444333233 888764 36666655554444 699988765
Q ss_pred cccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 312 QLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 312 DLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
...--.+.+.+...-+.| |.+.+.|+++-
T Consensus 101 ~y~~~~s~~~l~~~f~~v---a~a~~lPiilY 129 (293)
T 1w3i_A 101 YYYPRMSEKHLVKYFKTL---CEVSPHPVYLY 129 (293)
T ss_dssp CSCSSCCHHHHHHHHHHH---HHHCSSCEEEE
T ss_pred CCCCCCCHHHHHHHHHHH---HhhCCCCEEEE
Confidence 543212456666665655 44568999874
No 247
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=55.65 E-value=1.1e+02 Score=31.57 Aligned_cols=112 Identities=10% Similarity=0.172 Sum_probs=76.2
Q ss_pred HHHHHHHHHcCCcEEEEcccC-----------ChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVT-----------GANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~-----------sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIar 310 (547)
++.++.+.+.|+|++-+-+-. ..+.++.++++..+. .+.+++-+-..+.++-+.+. +|.+-||-
T Consensus 123 ~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~--Gl~~~te~~d~~~~~~l~~~---vd~lkIgA 197 (350)
T 1vr6_A 123 METAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKY--GMYVVTEALGEDDLPKVAEY---ADIIQIGA 197 (350)
T ss_dssp HHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHHH---CSEEEECG
T ss_pred HHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHc--CCcEEEEeCCHHHHHHHHHh---CCEEEECc
Confidence 455677888999987442211 146788888887665 57899988888888777664 79999997
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHH-hCc-cEEee
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQ-DGA-DVVVL 379 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~-~g~-D~vmL 379 (547)
+++-- .+ +++.+-+.||||++.|.| ..|-.|+ ..+++++. .|. +.+++
T Consensus 198 r~~~n------~~-----LL~~va~~~kPVilk~G~--~~tl~ei--------~~Ave~i~~~GN~~viLc 247 (350)
T 1vr6_A 198 RNAQN------FR-----LLSKAGSYNKPVLLKRGF--MNTIEEF--------LLSAEYIANSGNTKIILC 247 (350)
T ss_dssp GGTTC------HH-----HHHHHHTTCSCEEEECCT--TCCHHHH--------HHHHHHHHHTTCCCEEEE
T ss_pred ccccC------HH-----HHHHHHccCCcEEEcCCC--CCCHHHH--------HHHHHHHHHCCCCeEEEE
Confidence 66652 22 334444789999999886 3455566 66666554 355 55554
No 248
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=55.65 E-value=34 Score=33.65 Aligned_cols=101 Identities=8% Similarity=0.029 Sum_probs=58.3
Q ss_pred HHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEe---cC--------HHHHhhHHHHHhhcCEEEEcCC
Q psy6272 243 HVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKI---ET--------LLGMEYMDEIIMESDGVVLNRI 311 (547)
Q Consensus 243 ~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakI---Et--------~~av~nldeIl~~~DgImIarg 311 (547)
+.++.+.+.|++.++++-+ +.++.+.+.++.++.+ ++...+-| +. .+.++.|++.+...+.-.+|=|
T Consensus 31 ~vl~~~~~~GV~~~v~~~~-~~~~~~~~~~la~~~~-~v~~~~GiHP~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~aIG 108 (301)
T 2xio_A 31 DVIGRAVEIGVKKFMITGG-NLQDSKDALHLAQTNG-MFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKVVAIG 108 (301)
T ss_dssp HHHHHHHHHTEEEEEECCC-SHHHHHHHHHHHTTCT-TEEEEECCCGGGTHHHHHHCHHHHHHHHHHHHHTCTTTEEEEE
T ss_pred HHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHHCC-CEEEEEEECcChhhhCcccccHHHHHHHHHHHhcCCCCeEEEE
Confidence 3467788899999888754 5777777777665433 33222222 11 1234555555543222334446
Q ss_pred cccccCCh-H-HHHHHH----HHHHHHHHHcCCcEEEEcC
Q psy6272 312 QLAVATSV-E-VTFLAQ----KMIAARCNKQGKPFLVVGD 345 (547)
Q Consensus 312 DLg~e~~~-e-~v~~~q----k~ii~~c~~~gKPvi~aTq 345 (547)
..|++... . .-...| +..++.|++.|+||++.|.
T Consensus 109 EiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~r 148 (301)
T 2xio_A 109 ECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCR 148 (301)
T ss_dssp EEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEEE
T ss_pred EeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEec
Confidence 66766532 1 111233 4566889999999999763
No 249
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=55.45 E-value=63 Score=32.74 Aligned_cols=118 Identities=15% Similarity=0.119 Sum_probs=72.1
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHH-HHHHHHHHHHHHhhhhhhhHH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAH-HRVDILKEILKKTESVLWEKQ 407 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~-eaV~~m~~I~~~aE~~~~~~~ 407 (547)
+...|+.+|.|+.+. .|..+.. .-+...-..|++.++.. +.... .+.........+.+..++..
T Consensus 102 lA~~aa~~G~~~~Iv-----mP~~~~~--------~k~~~~~~~GA~Vv~v~-~~~~~~~~~~~~~~~~~~~~~~~~~~- 166 (344)
T 3vc3_A 102 MAFMAAMKGYKMVLT-----MPSYTSL--------ERRVTMRAFGAELILTD-PAKGMGGTVKKAYELLENTPNAHMLQ- 166 (344)
T ss_dssp HHHHHHHHTCEEEEE-----EETTSCH--------HHHHHHHHTTCEEEEEC-GGGHHHHHHHHHHHHHHHSTTEECCC-
T ss_pred HHHHHHHcCCcEEEE-----ECCCChH--------HHHHHHHHcCCEEEEEC-CCCcchHHHHHHHHHHhhccCceecc-
Confidence 667799999999886 4544444 55566667899998886 43333 44333333333332222211
Q ss_pred HHHHhhhcCCCCCChhhHHH---HHHHHHHHhc--CCcEEEEEcCCchHHHHHH----hcCCCCCEEEEeCch
Q psy6272 408 VFEDLCALACPPLDPAHSIV---IACVNAALKC--QAVAIIVITCSGYSAKLVS----KYRPQCPILAVSSLG 471 (547)
Q Consensus 408 ~f~~~~~~~~~~~~~~~~ia---~aav~~a~~~--~a~aIvv~T~sG~tA~~is----k~RP~~pIiavt~~~ 471 (547)
+..++...++ .-+.|+.+++ ..+++|+..-+|.+..-++ ..+|.+.|++|-+..
T Consensus 167 ----------~~~np~~~~a~~~t~g~EI~eq~~~~~d~vv~~vGgGG~~~Gi~~~~k~~~p~v~vigVep~~ 229 (344)
T 3vc3_A 167 ----------QFSNPANTQVHFETTGPEIWEDTNGQVDIFVMGIGSGGTVSGVGQYLKSKNPNVKIYGVEPSE 229 (344)
T ss_dssp ----------TTTCHHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGG
T ss_pred ----------ccccchhHHHHHHHHHHHHHHHhCCCceEEEEecCCccchHHHhhhhHhhCCCceEEEEcCCC
Confidence 1122222222 2345666665 5789999988988876554 468999999998754
No 250
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=55.44 E-value=58 Score=33.64 Aligned_cols=89 Identities=9% Similarity=0.159 Sum_probs=58.7
Q ss_pred hhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 265 NSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 265 ~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
++.+.++++..+. .+.+++-.=..++++-++ +. +|.+=||-+|+.- ++ .++.+-+.|||||+.
T Consensus 78 e~~~~L~~~~~~~--Gi~~~st~fD~~svd~l~---~~~v~~~KI~S~~~~N------~p-----LL~~va~~gKPviLs 141 (350)
T 3g8r_A 78 EQMQKLVAEMKAN--GFKAICTPFDEESVDLIE---AHGIEIIKIASCSFTD------WP-----LLERIARSDKPVVAS 141 (350)
T ss_dssp HHHHHHHHHHHHT--TCEEEEEECSHHHHHHHH---HTTCCEEEECSSSTTC------HH-----HHHHHHTSCSCEEEE
T ss_pred HHHHHHHHHHHHc--CCcEEeccCCHHHHHHHH---HcCCCEEEECcccccC------HH-----HHHHHHhhCCcEEEE
Confidence 3344444555443 466777665666655443 34 7899999888862 33 334456789999999
Q ss_pred cCCCCCCCcccccccCccchhhHHHHHHh-CccEEeeC
Q psy6272 344 GDILPDHNVEEYSDVSIGDMNDVNSIVQD-GADVVVLT 380 (547)
Q Consensus 344 Tq~Le~PtraE~~~~~~~~~~Dv~nav~~-g~D~vmLs 380 (547)
|.| -|-.|+ ...++++.. |.+.++|-
T Consensus 142 tGm---stl~Ei--------~~Ave~i~~~g~~viLlh 168 (350)
T 3g8r_A 142 TAG---ARREDI--------DKVVSFMLHRGKDLTIMH 168 (350)
T ss_dssp CTT---CCHHHH--------HHHHHHHHTTTCCEEEEE
T ss_pred CCC---CCHHHH--------HHHHHHHHHcCCCEEEEe
Confidence 996 377788 887877765 66766653
No 251
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=55.41 E-value=1.8e+02 Score=29.35 Aligned_cols=70 Identities=20% Similarity=0.142 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHc-CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHH
Q psy6272 320 EVTFLAQKMIAARCNKQ-GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKK 398 (547)
Q Consensus 320 e~v~~~qk~ii~~c~~~-gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~ 398 (547)
+..+.+-+.+-+..++. ++|+|-...+. -. .|+..++..|||+|++. .--..+-...+.+|+++
T Consensus 259 ~~~~~a~~~v~~~~~~~~~~pIIg~GGI~------s~--------~Da~e~i~aGAs~Vqv~-Ta~~y~GP~~~~~I~~~ 323 (354)
T 3tjx_A 259 YVLPTALANINAFYRRCPGKLIFGCGGVY------TG--------EDAFLHVLAGASMVQVG-TALQEEGPSIFERLTSE 323 (354)
T ss_dssp GGHHHHHHHHHHHHHHCTTSEEEEESSCC------SH--------HHHHHHHHHTEEEEEEC-HHHHHHCTTHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhcCCCcEEEeCCcC------CH--------HHHHHHHHcCCCEEEEC-hhhhhcCchHHHHHHHH
Confidence 34444444333333333 67887766643 24 89999999999999998 32223666777888888
Q ss_pred hhhhhh
Q psy6272 399 TESVLW 404 (547)
Q Consensus 399 aE~~~~ 404 (547)
.++.+.
T Consensus 324 L~~~L~ 329 (354)
T 3tjx_A 324 LLGVMA 329 (354)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877543
No 252
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=55.40 E-value=89 Score=29.51 Aligned_cols=99 Identities=9% Similarity=-0.053 Sum_probs=62.7
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEE-Ee---------------cCHHHHhhHHHHHhh---
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILA-KI---------------ETLLGMEYMDEIIME--- 302 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~Iia-kI---------------Et~~av~nldeIl~~--- 302 (547)
.+.++.+.+.|+|+|-+.+- ...+++++++.+++.|-.+..+. -. +..++++.+.+.+..
T Consensus 26 ~~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~ 104 (269)
T 3ngf_A 26 LERFRLAAEAGFGGVEFLFP-YDFDADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALHYALA 104 (269)
T ss_dssp HHHHHHHHHTTCSEEECSCC-TTSCHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEecCC-ccCCHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHHHHHH
Confidence 34578999999999998763 35679999999988765443322 00 012355566666655
Q ss_pred --cCEEEEcCCcccccCC----hHHHHHHHHHHHHHHHHcCCcEEE
Q psy6272 303 --SDGVVLNRIQLAVATS----VEVTFLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 303 --~DgImIargDLg~e~~----~e~v~~~qk~ii~~c~~~gKPvi~ 342 (547)
++.|.+.+| ..-... ++.+...-+++...|.++|..+.+
T Consensus 105 lGa~~v~~~~g-~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 149 (269)
T 3ngf_A 105 LDCRTLHAMSG-ITEGLDRKACEETFIENFRYAADKLAPHGITVLV 149 (269)
T ss_dssp TTCCEEECCBC-BCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred cCCCEEEEccC-CCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 367777666 322222 234555556777778888877665
No 253
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=55.29 E-value=87 Score=30.13 Aligned_cols=105 Identities=10% Similarity=0.079 Sum_probs=68.1
Q ss_pred HHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccccCChHHHH
Q psy6272 245 VDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAVATSVEVTF 323 (547)
Q Consensus 245 i~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~e~~~e~v~ 323 (547)
.+..++.|++.|=++| +++.-++.++.+-++. .+..|=| -|..-.+..+..+.. ++.| +.|+
T Consensus 31 a~al~~gGi~~iEvt~-~t~~a~~~I~~l~~~~-p~~~IGA--GTVlt~~~a~~ai~AGA~fi-vsP~------------ 93 (217)
T 3lab_A 31 AKALVAGGVHLLEVTL-RTEAGLAAISAIKKAV-PEAIVGA--GTVCTADDFQKAIDAGAQFI-VSPG------------ 93 (217)
T ss_dssp HHHHHHTTCCEEEEET-TSTTHHHHHHHHHHHC-TTSEEEE--ECCCSHHHHHHHHHHTCSEE-EESS------------
T ss_pred HHHHHHcCCCEEEEeC-CCccHHHHHHHHHHHC-CCCeEee--ccccCHHHHHHHHHcCCCEE-EeCC------------
Confidence 4566778999998887 5566666665544433 3344433 355556666666666 4554 4455
Q ss_pred HHHHHHHHHHHHcCC------cEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcc
Q psy6272 324 LAQKMIAARCNKQGK------PFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSE 383 (547)
Q Consensus 324 ~~qk~ii~~c~~~gK------Pvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~E 383 (547)
.-.++++.|+++|. |++=... -. +++..|...|+|.+-+-.++
T Consensus 94 -~~~evi~~~~~~~v~~~~~~~~~PG~~--------Tp--------tE~~~A~~~Gad~vK~FPa~ 142 (217)
T 3lab_A 94 -LTPELIEKAKQVKLDGQWQGVFLPGVA--------TA--------SEVMIAAQAGITQLKCFPAS 142 (217)
T ss_dssp -CCHHHHHHHHHHHHHCSCCCEEEEEEC--------SH--------HHHHHHHHTTCCEEEETTTT
T ss_pred -CcHHHHHHHHHcCCCccCCCeEeCCCC--------CH--------HHHHHHHHcCCCEEEECccc
Confidence 13357889999999 8764311 12 77788999999999887333
No 254
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=54.99 E-value=43 Score=32.93 Aligned_cols=131 Identities=14% Similarity=0.200 Sum_probs=67.2
Q ss_pred cCCCCCCh-hhHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHh-hHHHHHhhc------
Q psy6272 232 FNLPVIAD-RDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGME-YMDEIIMES------ 303 (547)
Q Consensus 232 ~~lp~lt~-~D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~-nldeIl~~~------ 303 (547)
+.+|.+|+ .|...++++.+. +|++-++- ++.++...+++. .+. +..|+.| .|.. +++|+..++
T Consensus 86 ~Gl~~~te~~d~~~~~~l~~~-vd~~kIga-~~~~n~~ll~~~-a~~--~kPV~lk----~G~~~t~~e~~~Av~~i~~~ 156 (262)
T 1zco_A 86 YGLVTVTEVMDTRHVELVAKY-SDILQIGA-RNSQNFELLKEV-GKV--ENPVLLK----RGMGNTIQELLYSAEYIMAQ 156 (262)
T ss_dssp HTCEEEEECCCGGGHHHHHHH-CSEEEECG-GGTTCHHHHHHH-TTS--SSCEEEE----CCTTCCHHHHHHHHHHHHTT
T ss_pred cCCcEEEeeCCHHhHHHHHhh-CCEEEECc-ccccCHHHHHHH-Hhc--CCcEEEe----cCCCCCHHHHHHHHHHHHHC
Confidence 34444444 255557777777 78777763 344444444433 222 3445554 4554 566666553
Q ss_pred ---CEEEEcCCcccc-cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEe
Q psy6272 304 ---DGVVLNRIQLAV-ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVV 378 (547)
Q Consensus 304 ---DgImIargDLg~-e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vm 378 (547)
+.+++-||=-.. .++.+.+.... +-..-+..|.||++ +++.+--. . ..+..++ .|+..|+|++|
T Consensus 157 Gn~~i~L~~RG~~~~~~y~~~~v~L~a--i~~lk~~~~~pVi~------d~sH~~g~-~--~~v~~~~~aAva~Ga~Gl~ 225 (262)
T 1zco_A 157 GNENVILCERGIRTFETATRFTLDISA--VPVVKELSHLPIIV------DPSHPAGR-R--SLVIPLAKAAYAIGADGIM 225 (262)
T ss_dssp TCCCEEEEECCBCCSCCSSSSBCCTTH--HHHHHHHBSSCEEE------CSSTTTCS-G--GGHHHHHHHHHHTTCSEEE
T ss_pred CCCeEEEEECCCCCCCCcChhhcCHHH--HHHHHhhhCCCEEE------EcCCCCCc-c--chHHHHHHHHHHcCCCEEE
Confidence 788889983221 33433222111 11112345899954 55543220 0 0001322 47889999999
Q ss_pred eCCc
Q psy6272 379 LTQS 382 (547)
Q Consensus 379 Lsk~ 382 (547)
+-|.
T Consensus 226 iE~H 229 (262)
T 1zco_A 226 VEVH 229 (262)
T ss_dssp EEBC
T ss_pred EEec
Confidence 9644
No 255
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=54.90 E-value=1.4e+02 Score=29.41 Aligned_cols=136 Identities=15% Similarity=0.131 Sum_probs=78.3
Q ss_pred CCCCcCCCCCChhh-HHHHHHHHHcCCcEEEE--cccC---ChhhHHHHHHHHHhcCCCceEEEEecCH-----------
Q psy6272 228 PRVTFNLPVIADRD-KHVVDLIVREAVDIIIM--SSVT---GANSIREMRGMLEDHVDRVLILAKIETL----------- 290 (547)
Q Consensus 228 p~~~~~lp~lt~~D-~~di~~~~~~g~d~I~~--sfV~---sa~di~~~r~~l~~~~~~i~IiakIEt~----------- 290 (547)
|...+++..-+..+ ...++.+...|+|.|=+ =+-. ..+++.++-..+.+.-.++.||.-+-+.
T Consensus 40 p~i~v~l~~~~~~e~~~~~~~~~~~gaD~VElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~ 119 (276)
T 3o1n_A 40 PKIIVSLMGKTITDVKSEALAYREADFDILEWRVDHFANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTG 119 (276)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTTSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCCHH
T ss_pred cEEEEEeCCCCHHHHHHHHHHHhhCCCCEEEEEeccccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCCHH
Confidence 44455555544444 33344555589998765 3333 3345555544454443456777766542
Q ss_pred HHHhhHHHHHhh--cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCC-CCCcccccccCccchhhH-
Q psy6272 291 LGMEYMDEIIME--SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILP-DHNVEEYSDVSIGDMNDV- 366 (547)
Q Consensus 291 ~av~nldeIl~~--~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le-~PtraE~~~~~~~~~~Dv- 366 (547)
+-++-+...++. +|.|=| -...+ ....+++++.+++.|..+|.+-+-++ .|+..|+ ...
T Consensus 120 ~~~~ll~~~l~~g~~dyIDv-----El~~~----~~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~~el--------~~~~ 182 (276)
T 3o1n_A 120 QYIDLNRAAVDSGLVDMIDL-----ELFTG----DDEVKATVGYAHQHNVAVIMSNHDFHKTPAAEEI--------VQRL 182 (276)
T ss_dssp HHHHHHHHHHHHTCCSEEEE-----EGGGC----HHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHH--------HHHH
T ss_pred HHHHHHHHHHhcCCCCEEEE-----ECcCC----HHHHHHHHHHHHhCCCEEEEEeecCCCCcCHHHH--------HHHH
Confidence 223344444443 355432 22222 23566788889999999999888777 7776666 333
Q ss_pred HHHHHhCccEEeeC
Q psy6272 367 NSIVQDGADVVVLT 380 (547)
Q Consensus 367 ~nav~~g~D~vmLs 380 (547)
..+...|+|.+=+.
T Consensus 183 ~~~~~~GaDIvKia 196 (276)
T 3o1n_A 183 RKMQELGADIPKIA 196 (276)
T ss_dssp HHHHHTTCSEEEEE
T ss_pred HHHHHcCCCEEEEE
Confidence 35556688876554
No 256
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=54.75 E-value=98 Score=31.32 Aligned_cols=128 Identities=8% Similarity=0.032 Sum_probs=72.8
Q ss_pred CCChhhHHHH-HHHHHcCCcEEEE-----cccCC-------hhhHHHHHHHHHhcCCCceEEEE-ecCHHHHhhHHHHHh
Q psy6272 236 VIADRDKHVV-DLIVREAVDIIIM-----SSVTG-------ANSIREMRGMLEDHVDRVLILAK-IETLLGMEYMDEIIM 301 (547)
Q Consensus 236 ~lt~~D~~di-~~~~~~g~d~I~~-----sfV~s-------a~di~~~r~~l~~~~~~i~Iiak-IEt~~av~nldeIl~ 301 (547)
.++..++..| +...+.|+|.|=+ ++..| +.+.+.++...+ ...++++.+. .=+..-.+.++...+
T Consensus 26 ~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~-~~~~~~i~~l~~p~~~~~~~i~~a~~ 104 (345)
T 1nvm_A 26 QYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAG-EISHAQIATLLLPGIGSVHDLKNAYQ 104 (345)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHT-TCSSSEEEEEECBTTBCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHh-hCCCCEEEEEecCCcccHHHHHHHHh
Confidence 4566776555 4556689999999 44433 445555555554 3356666665 221111334444444
Q ss_pred h-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHH-HHHhCccEEee
Q psy6272 302 E-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNS-IVQDGADVVVL 379 (547)
Q Consensus 302 ~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~n-av~~g~D~vmL 379 (547)
. +|++.|. +. ..++. .-+..++.|+++|+.+.+.- +++++.+. .++.+++. +...|+|++-|
T Consensus 105 aGvd~v~I~---~~----~s~~~-~~~~~i~~ak~~G~~v~~~~---~~a~~~~~-----e~~~~ia~~~~~~Ga~~i~l 168 (345)
T 1nvm_A 105 AGARVVRVA---TH----CTEAD-VSKQHIEYARNLGMDTVGFL---MMSHMIPA-----EKLAEQGKLMESYGATCIYM 168 (345)
T ss_dssp HTCCEEEEE---EE----TTCGG-GGHHHHHHHHHHTCEEEEEE---ESTTSSCH-----HHHHHHHHHHHHHTCSEEEE
T ss_pred CCcCEEEEE---Ee----ccHHH-HHHHHHHHHHHCCCEEEEEE---EeCCCCCH-----HHHHHHHHHHHHCCCCEEEE
Confidence 4 6888774 22 21111 23557888999999988752 22332222 22355553 45568999998
Q ss_pred C
Q psy6272 380 T 380 (547)
Q Consensus 380 s 380 (547)
.
T Consensus 169 ~ 169 (345)
T 1nvm_A 169 A 169 (345)
T ss_dssp E
T ss_pred C
Confidence 6
No 257
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=54.58 E-value=37 Score=31.74 Aligned_cols=67 Identities=10% Similarity=0.198 Sum_probs=44.2
Q ss_pred HHHHHHHHHcCCcEEEEcccCC--------hhhHHHHHHHHHhcCCCceEEE--EecCHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTG--------ANSIREMRGMLEDHVDRVLILA--KIETLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~s--------a~di~~~r~~l~~~~~~i~Iia--kIEt~~av~nldeIl~~-~DgImIar 310 (547)
.+++..+.+.|+|+|.++.+-. +.+...++++.+.. ++.+++ -| |. +|+.+.++. +||+.+++
T Consensus 120 ~~~~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~--~~pvia~GGI-~~---~nv~~~~~~Ga~gv~vgs 193 (221)
T 1yad_A 120 LEEAVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI--SIPVIAIGGM-TP---DRLRDVKQAGADGIAVMS 193 (221)
T ss_dssp HHHHHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC--CSCEEEESSC-CG---GGHHHHHHTTCSEEEESH
T ss_pred HHHHHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC--CCCEEEECCC-CH---HHHHHHHHcCCCEEEEhH
Confidence 3457778899999999977521 23455566554433 445554 45 43 577777776 79999998
Q ss_pred Cccc
Q psy6272 311 IQLA 314 (547)
Q Consensus 311 gDLg 314 (547)
+=+.
T Consensus 194 ~i~~ 197 (221)
T 1yad_A 194 GIFS 197 (221)
T ss_dssp HHHT
T ss_pred HhhC
Confidence 7554
No 258
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=54.58 E-value=30 Score=36.63 Aligned_cols=119 Identities=13% Similarity=0.173 Sum_probs=71.0
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHH----HHHHHHHHHHHHhhhhhh
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAH----HRVDILKEILKKTESVLW 404 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~----eaV~~m~~I~~~aE~~~~ 404 (547)
+...|++.|.++++. .|..... .-+...-..|++.+... ++... .+++...++.++....++
T Consensus 176 lA~aaa~~Gi~~~Iv-----mP~~~s~--------~k~~~l~~~GAeVv~v~-~~~~~d~~~~~~~~a~~la~~~~~~~~ 241 (435)
T 1jbq_A 176 LALAAAVRGYRCIIV-----MPEKMSS--------EKVDVLRALGAEIVRTP-TNARFDSPESHVGVAWRLKNEIPNSHI 241 (435)
T ss_dssp HHHHHHHHTCEEEEE-----ECSCCCH--------HHHHHHHHTTCEEEECC-C-------CCHHHHHHHHHHHSTTEEC
T ss_pred HHHHHHHcCCeEEEE-----eCCCCCH--------HHHHHHHhCCCEEEEec-CCCCcchHHHHHHHHHHHHHhcCCeEE
Confidence 567789999999885 4443333 44455566799988876 43222 234444444443322111
Q ss_pred hHHHHHHhhhcCCCCCChhhH---HHHHHHHHHHhc--CCcEEEEEcCCchHHHHHHh----cCCCCCEEEEeCchh
Q psy6272 405 EKQVFEDLCALACPPLDPAHS---IVIACVNAALKC--QAVAIIVITCSGYSAKLVSK----YRPQCPILAVSSLGY 472 (547)
Q Consensus 405 ~~~~f~~~~~~~~~~~~~~~~---ia~aav~~a~~~--~a~aIvv~T~sG~tA~~isk----~RP~~pIiavt~~~~ 472 (547)
.. +..++... ....+.|+..++ +.++||+-+-+|.++.-+++ ..|.+.|++|.+...
T Consensus 242 i~-----------q~~n~~n~~ag~~t~a~EI~eQl~~~~D~vVvpvGtGGtlaGi~~~lk~~~p~vrVigVep~gs 307 (435)
T 1jbq_A 242 LD-----------QYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDPEGS 307 (435)
T ss_dssp CC-----------TTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEETTC
T ss_pred eC-----------ccCCcccHHHHHHHHHHHHHHHcCCCCCEEEEecCCcHhHHHHHHHHHHhCCCCEEEEEecCCc
Confidence 10 01111111 123356777666 37999999999999876665 479999999998654
No 259
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=54.58 E-value=16 Score=37.92 Aligned_cols=49 Identities=20% Similarity=0.379 Sum_probs=39.0
Q ss_pred ceEEEecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHHH
Q psy6272 55 TNIMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKLA 104 (547)
Q Consensus 55 tkIi~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~a 104 (547)
..+.+.+|......+.++.++++|+++.=|| +|++++...+ +++.+|+.
T Consensus 142 ~~~~~~i~~~~~~~~~a~~~~~~G~d~i~i~~~~g~~~~~~e-~i~~ir~~ 191 (404)
T 1eep_A 142 LRVGAAVSIDIDTIERVEELVKAHVDILVIDSAHGHSTRIIE-LIKKIKTK 191 (404)
T ss_dssp BCCEEEECSCTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHH-HHHHHHHH
T ss_pred ceEEEEeCCChhHHHHHHHHHHCCCCEEEEeCCCCChHHHHH-HHHHHHHH
Confidence 4567788765566888999999999999999 9998866666 77777653
No 260
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=54.50 E-value=1e+02 Score=28.88 Aligned_cols=90 Identities=10% Similarity=0.075 Sum_probs=58.1
Q ss_pred HHHHHHHHHcCCcEEEEccc-----CChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-----cCEEEEcCC
Q psy6272 242 KHVVDLIVREAVDIIIMSSV-----TGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-----SDGVVLNRI 311 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV-----~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-----~DgImIarg 311 (547)
.+.++.+.+.|+|+|-+... .+.++++++++.+++.|-.+..+.-- ..+.++.+.+.+.. +..|.+.+|
T Consensus 33 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~-~~~~~~~~~~~i~~A~~lGa~~v~~~p~ 111 (257)
T 3lmz_A 33 DTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPI-YMKSEEEIDRAFDYAKRVGVKLIVGVPN 111 (257)
T ss_dssp HHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEE-EECSHHHHHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecc-ccCCHHHHHHHHHHHHHhCCCEEEecCC
Confidence 45578999999999988753 36788999999999877554333211 01334444444444 366666544
Q ss_pred cccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 312 QLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 312 DLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
.+ .-+++...|+++|..+.+=
T Consensus 112 -------~~----~l~~l~~~a~~~gv~l~lE 132 (257)
T 3lmz_A 112 -------YE----LLPYVDKKVKEYDFHYAIH 132 (257)
T ss_dssp -------GG----GHHHHHHHHHHHTCEEEEE
T ss_pred -------HH----HHHHHHHHHHHcCCEEEEe
Confidence 22 2355778888888887763
No 261
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=54.20 E-value=1.3e+02 Score=29.99 Aligned_cols=98 Identities=12% Similarity=0.107 Sum_probs=64.8
Q ss_pred CCCCChhhHHHHHHHHHcCCcEEEEccc-------------CChhhHHHHHHHHHhcCCCceEEEEecC------HHHHh
Q psy6272 234 LPVIADRDKHVVDLIVREAVDIIIMSSV-------------TGANSIREMRGMLEDHVDRVLILAKIET------LLGME 294 (547)
Q Consensus 234 lp~lt~~D~~di~~~~~~g~d~I~~sfV-------------~sa~di~~~r~~l~~~~~~i~IiakIEt------~~av~ 294 (547)
+..+|-+|..--+.+-+.|+|.|.+..- -+.+++..--+.+....++..+++=+++ .++++
T Consensus 31 i~m~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY~s~~~a~~ 110 (275)
T 3vav_A 31 IAMLTCYDASFAALLDRANVDVQLIGDSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTYGTPADAFA 110 (275)
T ss_dssp EEEEECCSHHHHHHHHHTTCSEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSCSSHHHHHH
T ss_pred EEEEeCcCHHHHHHHHHcCCCEEEECcHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCCCCHHHHHH
Confidence 3345678887778888999999977621 1123333222333334457899999998 36788
Q ss_pred hHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 295 YMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 295 nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
|.-.++++ ++||-|-=|. .....+++..++|+||.-.
T Consensus 111 ~a~rl~kaGa~aVklEdg~------------~~~~~i~~l~~~GIpv~gH 148 (275)
T 3vav_A 111 SAVKLMRAGAQMVKFEGGE------------WLAETVRFLVERAVPVCAH 148 (275)
T ss_dssp HHHHHHHTTCSEEEEECCG------------GGHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHcCCCEEEECCch------------hHHHHHHHHHHCCCCEEEe
Confidence 88888876 7899887552 1123455566899999864
No 262
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=54.14 E-value=18 Score=37.28 Aligned_cols=45 Identities=27% Similarity=0.533 Sum_probs=35.0
Q ss_pred EEEecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHHH
Q psy6272 57 IMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKLA 104 (547)
Q Consensus 57 Ii~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~a 104 (547)
+.+-+|... .+.++.++++|+++.-|| +|++.+.+.+ +++.+|+.
T Consensus 98 vga~ig~~~--~e~a~~l~eaGad~I~ld~a~G~~~~~~~-~i~~i~~~ 143 (361)
T 3khj_A 98 VGAAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIR-TLKEIKSK 143 (361)
T ss_dssp CEEEECTTC--HHHHHHHHHTTCSEEEECCSCCSBHHHHH-HHHHHHHH
T ss_pred EEEEeCCCH--HHHHHHHHHcCcCeEEEeCCCCCcHHHHH-HHHHHHHh
Confidence 455556433 899999999999999999 9998877666 66666653
No 263
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=54.12 E-value=97 Score=31.32 Aligned_cols=100 Identities=18% Similarity=0.169 Sum_probs=54.6
Q ss_pred HHHHHhcCCCceEEEEecCH------HHHhhHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHc-CCcEEE
Q psy6272 271 RGMLEDHVDRVLILAKIETL------LGMEYMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQ-GKPFLV 342 (547)
Q Consensus 271 r~~l~~~~~~i~IiakIEt~------~av~nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~-gKPvi~ 342 (547)
++...+.+.+..|+|..|.. ++++....-.++ +|+||+- | + -..++ +-+.|++. ++|+.+
T Consensus 153 ~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay~eAGAD~ifi~-~---~-~~~~~-------~~~i~~~~~~~Pv~~ 220 (307)
T 3lye_A 153 VATKRRLRSDFVLIARTDALQSLGYEECIERLRAARDEGADVGLLE-G---F-RSKEQ-------AAAAVAALAPWPLLL 220 (307)
T ss_dssp HHHHHHTTCCCEEEEEECCHHHHCHHHHHHHHHHHHHTTCSEEEEC-C---C-SCHHH-------HHHHHHHHTTSCBEE
T ss_pred HHHHHhcCCCeEEEEechhhhccCHHHHHHHHHHHHHCCCCEEEec-C---C-CCHHH-------HHHHHHHccCCceeE
Confidence 33333346788999999986 344444444444 6999985 2 1 01122 22334444 589865
Q ss_pred EcCCCC---CC--CcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHh
Q psy6272 343 VGDILP---DH--NVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKT 399 (547)
Q Consensus 343 aTq~Le---~P--traE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~a 399 (547)
.|++ .| +.+|. -..|+.-+... .-...-+.+.|.+.++++
T Consensus 221 --n~~~~g~~p~~t~~eL--------------~~lGv~~v~~~-~~~~raa~~a~~~~~~~l 265 (307)
T 3lye_A 221 --NSVENGHSPLITVEEA--------------KAMGFRIMIFS-FATLAPAYAAIRETLVRL 265 (307)
T ss_dssp --EEETTSSSCCCCHHHH--------------HHHTCSEEEEE-TTTHHHHHHHHHHHHHHH
T ss_pred --EeecCCCCCCCCHHHH--------------HHcCCeEEEEC-hHHHHHHHHHHHHHHHHH
Confidence 3333 22 22232 33499888776 444445666666665554
No 264
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=53.95 E-value=28 Score=34.83 Aligned_cols=64 Identities=9% Similarity=0.138 Sum_probs=50.1
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHH--HhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLG--MEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~a--v~nldeIl~~-~DgImIar 310 (547)
.+.++.+++.|+|+|++-.. ++++++++.+.+...+.+++|.+ --| .+|+.++.+. +|+|-+|.
T Consensus 204 ~eea~eal~aGaD~I~LDn~-~~~~~~~~v~~l~~~~~~v~iea----SGGIt~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 204 LEQLDAVLPEKPELILLDNF-AVWQTQTAVQRRDSRAPTVMLES----SGGLSLQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp HHHHHHHGGGCCSEEEEETC-CHHHHHHHHHHHHHHCTTCEEEE----ESSCCTTTHHHHHHTTCSEEECGG
T ss_pred HHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCeEEEE----ECCCCHHHHHHHHhcCCCEEEECH
Confidence 57788899999999999885 77899999888876444554443 233 4789999988 89999986
No 265
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=53.82 E-value=39 Score=33.06 Aligned_cols=110 Identities=11% Similarity=0.074 Sum_probs=68.3
Q ss_pred HHHHHHHHHcCCcEEEE-----cccCCh----hhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCC
Q psy6272 242 KHVVDLIVREAVDIIIM-----SSVTGA----NSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRI 311 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~-----sfV~sa----~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIarg 311 (547)
.+.++...+.|+|++.+ .||-+- .-++.+|+.-- ..-+-+=-+|++++. -++..+++ +|+|-+.-
T Consensus 43 ~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G~~~v~~lr~~~p--~~~ldvHLmv~~p~~--~i~~~~~aGAd~itvH~- 117 (246)
T 3inp_A 43 GDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGI--TAGMDVHLMVKPVDA--LIESFAKAGATSIVFHP- 117 (246)
T ss_dssp HHHHHHHHHTTCCCEEEEEEBSSSSSCBCCCHHHHHHHHHHTC--CSCEEEEEECSSCHH--HHHHHHHHTCSEEEECG-
T ss_pred HHHHHHHHHcCCCEEEEEecCCCcCcchhcCHHHHHHHHHhCC--CCeEEEEEeeCCHHH--HHHHHHHcCCCEEEEcc-
Confidence 35577778899999888 776543 55666665420 122333356888865 36666666 79998872
Q ss_pred cccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEee
Q psy6272 312 QLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVL 379 (547)
Q Consensus 312 DLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmL 379 (547)
|-+ +. . .+.++.++++|+-++++.. -.|..|. ...++++.|.|++
T Consensus 118 ----Ea~-~~---~-~~~i~~ir~~G~k~Gvaln---p~Tp~e~-----------l~~~l~~vD~Vlv 162 (246)
T 3inp_A 118 ----EAS-EH---I-DRSLQLIKSFGIQAGLALN---PATGIDC-----------LKYVESNIDRVLI 162 (246)
T ss_dssp ----GGC-SC---H-HHHHHHHHTTTSEEEEEEC---TTCCSGG-----------GTTTGGGCSEEEE
T ss_pred ----ccc-hh---H-HHHHHHHHHcCCeEEEEec---CCCCHHH-----------HHHHHhcCCEEEE
Confidence 211 11 2 4577778999999999854 2233333 2234567888876
No 266
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=53.81 E-value=38 Score=34.14 Aligned_cols=120 Identities=13% Similarity=0.149 Sum_probs=70.5
Q ss_pred HHHHHHHHcCCcEEEEc---------ccC-----ChhhHHHHHHHHHhcCCCceEEEE--ecCHHHHhhHHHHHhh-cCE
Q psy6272 243 HVVDLIVREAVDIIIMS---------SVT-----GANSIREMRGMLEDHVDRVLILAK--IETLLGMEYMDEIIME-SDG 305 (547)
Q Consensus 243 ~di~~~~~~g~d~I~~s---------fV~-----sa~di~~~r~~l~~~~~~i~Iiak--IEt~~av~nldeIl~~-~Dg 305 (547)
+..+..-+.|+|.|.+= |-. +.++++++++.. ++++++| |-. ++....+.+. +|+
T Consensus 32 e~A~~ye~~GA~~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i~~~v-----~iPvl~k~~i~~---ide~qil~aaGAD~ 103 (297)
T 4adt_A 32 EQAKIAEKAGAIGVMILENIPSELRNTDGVARSVDPLKIEEIRKCI-----SINVLAKVRIGH---FVEAQILEELKVDM 103 (297)
T ss_dssp HHHHHHHHHTCSEEEECCCCC-----CCCCCCCCCHHHHHHHHTTC-----CSEEEEEEETTC---HHHHHHHHHTTCSE
T ss_pred HHHHHHHHcCCCEEEEecCCCCcchhcCCcccCCCHHHHHHHHHhc-----CCCEEEeccCCc---HHHHHHHHHcCCCE
Confidence 33566778899987655 322 667777766533 5888887 333 3333333333 799
Q ss_pred EEEcCCcccccCChHHHHHHHHHHHHHHHH--cCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcc
Q psy6272 306 VVLNRIQLAVATSVEVTFLAQKMIAARCNK--QGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSE 383 (547)
Q Consensus 306 ImIargDLg~e~~~e~v~~~qk~ii~~c~~--~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~E 383 (547)
| |.+-...+++ ++..+++ .|.++++.. .+. .+.-.++..|+|.+-.+ +.
T Consensus 104 I-----d~s~~~~~~~-------li~~i~~~~~g~~vvv~v-----~~~-----------~Ea~~a~~~Gad~I~v~-g~ 154 (297)
T 4adt_A 104 L-----DESEVLTMAD-------EYNHINKHKFKTPFVCGC-----TNL-----------GEALRRISEGASMIRTK-GE 154 (297)
T ss_dssp E-----EEETTSCCSC-------SSCCCCGGGCSSCEEEEE-----SSH-----------HHHHHHHHHTCSEEEEC-CC
T ss_pred E-----EcCCCCCHHH-------HHHHHHhcCCCCeEEEEe-----CCH-----------HHHHHHHhCCCCEEEEC-CC
Confidence 8 2221112211 2333344 578877632 222 44456778899999998 87
Q ss_pred --h--HHHHHHHHHHHHHHh
Q psy6272 384 --Q--AHHRVDILKEILKKT 399 (547)
Q Consensus 384 --t--a~eaV~~m~~I~~~a 399 (547)
| ..++|+++..+-.++
T Consensus 155 ~gTG~~~~~v~h~~~~~~ei 174 (297)
T 4adt_A 155 AGTGNIIEAIKHIRTVNNEI 174 (297)
T ss_dssp TTSCCCHHHHHHHHHHHHHH
T ss_pred cCCCchHHHHHHHHHhhhhh
Confidence 3 259999998875444
No 267
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=53.68 E-value=1.1e+02 Score=29.09 Aligned_cols=111 Identities=12% Similarity=0.092 Sum_probs=62.1
Q ss_pred HHHHHHHHHcCCcEEEE-----cccCCh----hhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCC
Q psy6272 242 KHVVDLIVREAVDIIIM-----SSVTGA----NSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRI 311 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~-----sfV~sa----~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIarg 311 (547)
.+.++.+.+.|+|++-+ +||.+. +.++++|+.. +..+.+--+|.+++ +.++..+++ +|||.+.-.
T Consensus 20 ~~~i~~~~~~Gad~ihldi~DG~fvp~~~~g~~~v~~lr~~~---~~~~~vhlmv~dp~--~~i~~~~~aGadgv~vh~e 94 (230)
T 1tqj_A 20 GEEIKAVDEAGADWIHVDVMDGRFVPNITIGPLIVDAIRPLT---KKTLDVHLMIVEPE--KYVEDFAKAGADIISVHVE 94 (230)
T ss_dssp HHHHHHHHHTTCSEEEEEEEBSSSSSCBCBCHHHHHHHGGGC---CSEEEEEEESSSGG--GTHHHHHHHTCSEEEEECS
T ss_pred HHHHHHHHHcCCCEEEEEEEecCCCcchhhhHHHHHHHHhhc---CCcEEEEEEccCHH--HHHHHHHHcCCCEEEECcc
Confidence 34567788889998744 344332 3334443321 12333446777763 245555555 799998832
Q ss_pred cccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEee
Q psy6272 312 QLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVL 379 (547)
Q Consensus 312 DLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmL 379 (547)
-... +. -.+.++.++++|+-+++++. -.|..|. ..++..++|.+.+
T Consensus 95 ~~~~----~~----~~~~~~~i~~~g~~~gv~~~---p~t~~e~-----------~~~~~~~~D~v~~ 140 (230)
T 1tqj_A 95 HNAS----PH----LHRTLCQIRELGKKAGAVLN---PSTPLDF-----------LEYVLPVCDLILI 140 (230)
T ss_dssp TTTC----TT----HHHHHHHHHHTTCEEEEEEC---TTCCGGG-----------GTTTGGGCSEEEE
T ss_pred cccc----hh----HHHHHHHHHHcCCcEEEEEe---CCCcHHH-----------HHHHHhcCCEEEE
Confidence 0011 11 12467778999999999863 1132333 3345678897644
No 268
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=53.65 E-value=1.8e+02 Score=29.01 Aligned_cols=129 Identities=9% Similarity=0.140 Sum_probs=76.9
Q ss_pred HHHHHHHHHcCCcEEEEc---------------ccCChhhHHHHHHHHHhc-CCCceEEEEecCHH------HHhhHHHH
Q psy6272 242 KHVVDLIVREAVDIIIMS---------------SVTGANSIREMRGMLEDH-VDRVLILAKIETLL------GMEYMDEI 299 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s---------------fV~sa~di~~~r~~l~~~-~~~i~IiakIEt~~------av~nldeI 299 (547)
.+.++...+.|+++|-+= .+...+-+.+++...... +....|+++.+... +++.....
T Consensus 97 ~~~v~~l~~aGa~gv~iEd~~~~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtda~~~~gl~~ai~ra~ay 176 (295)
T 1xg4_A 97 ARTVKSMIKAGAAGLHIEDQVGAKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTDALAVEGLDAAIERAQAY 176 (295)
T ss_dssp HHHHHHHHHHTCSEEEEECBCSSCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCeEEEECCCCCCcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecHHhhhcCHHHHHHHHHHH
Confidence 444566678899998763 122225566777766554 46789999999752 34444444
Q ss_pred Hhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCC-----CCCcccccccCccchhhHHHHHHhC
Q psy6272 300 IME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILP-----DHNVEEYSDVSIGDMNDVNSIVQDG 373 (547)
Q Consensus 300 l~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le-----~PtraE~~~~~~~~~~Dv~nav~~g 373 (547)
.++ +|+||+- | .+... .+-+.|++..+|+++ +|++ .++.+|. -..|
T Consensus 177 ~eAGAd~i~~e-~-------~~~~~----~~~~i~~~~~iP~~~--N~~~~g~~p~~~~~eL--------------~~~G 228 (295)
T 1xg4_A 177 VEAGAEMLFPE-A-------ITELA----MYRQFADAVQVPILA--NITEFGATPLFTTDEL--------------RSAH 228 (295)
T ss_dssp HHTTCSEEEET-T-------CCSHH----HHHHHHHHHCSCBEE--ECCSSSSSCCCCHHHH--------------HHTT
T ss_pred HHcCCCEEEEe-C-------CCCHH----HHHHHHHHcCCCEEE--EecccCCCCCCCHHHH--------------HHcC
Confidence 444 6999985 1 11111 233445666799875 4554 2233333 4459
Q ss_pred ccEEeeCCcchHHHHHHHHHHHHHHh
Q psy6272 374 ADVVVLTQSEQAHHRVDILKEILKKT 399 (547)
Q Consensus 374 ~D~vmLsk~Eta~eaV~~m~~I~~~a 399 (547)
++.++.. .-...-+...|.+..+..
T Consensus 229 ~~~v~~~-~~~~~aa~~a~~~~~~~i 253 (295)
T 1xg4_A 229 VAMALYP-LSAFRAMNRAAEHVYNVL 253 (295)
T ss_dssp CSEEEES-SHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEC-hHHHHHHHHHHHHHHHHH
Confidence 9999997 554446666666655554
No 269
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=53.64 E-value=40 Score=32.12 Aligned_cols=102 Identities=14% Similarity=0.055 Sum_probs=57.4
Q ss_pred HHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEe------c-------CHHHHhhHHHHHhhcCEEEEc
Q psy6272 243 HVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKI------E-------TLLGMEYMDEIIMESDGVVLN 309 (547)
Q Consensus 243 ~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakI------E-------t~~av~nldeIl~~~DgImIa 309 (547)
+.++.+.+.|++.++.+-. +.++.+.+.++..+...++...+-| . +.+.++.+.+.+.....-.+|
T Consensus 24 ~~l~~~~~~Gv~~~v~~~~-~~~~~~~~~~l~~~~~~~i~~~~GihP~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 102 (272)
T 2y1h_A 24 DVLEKAKKANVVALVAVAE-HSGEFEKIMQLSERYNGFVLPCLGVHPVQGLPPEDQRSVTLKDLDVALPIIENYKDRLLA 102 (272)
T ss_dssp HHHHHHHHTTEEEEEECCS-SGGGHHHHHHHHHHTTTTEEEEECCCSBC-------CBCCHHHHHHHHHHHHHHGGGCSE
T ss_pred HHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHHCCCCEEEEEEECCCccccccccccCCHHHHHHHHHHHHhCCCCEEE
Confidence 3367788899998877743 4677777777665543333222211 1 223455555545432111223
Q ss_pred CCcccccCC--h--H-HHHHHH----HHHHHHHHHcCCcEEEEcC
Q psy6272 310 RIQLAVATS--V--E-VTFLAQ----KMIAARCNKQGKPFLVVGD 345 (547)
Q Consensus 310 rgDLg~e~~--~--e-~v~~~q----k~ii~~c~~~gKPvi~aTq 345 (547)
=|..|.+.. . . .....| +..++.|++.|+||++.|.
T Consensus 103 iGE~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~ 147 (272)
T 2y1h_A 103 IGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSR 147 (272)
T ss_dssp EEEEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEECT
T ss_pred EEeccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeC
Confidence 366677652 1 1 122333 3567889999999999764
No 270
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=53.62 E-value=99 Score=28.53 Aligned_cols=100 Identities=15% Similarity=0.163 Sum_probs=54.1
Q ss_pred HHHHHHHHHcCCcEEEEccc-CChhhH---HHH----HHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCc
Q psy6272 242 KHVVDLIVREAVDIIIMSSV-TGANSI---REM----RGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQ 312 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV-~sa~di---~~~----r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIargD 312 (547)
.+.++.+++.|+|+|.+-+- .+...+ .++ ++..... .+.++.. +.++...+. +|+|.++-.|
T Consensus 34 ~~~~~~~~~~G~~~i~l~~~~~~~~~~~~~~~~~~~l~~~~~~~--~v~v~v~-------~~~~~a~~~gad~v~l~~~~ 104 (227)
T 2tps_A 34 VTVVQKALKGGATLYQFREKGGDALTGEARIKFAEKAQAACREA--GVPFIVN-------DDVELALNLKADGIHIGQED 104 (227)
T ss_dssp HHHHHHHHHHTCSEEEECCCSTTCCCHHHHHHHHHHHHHHHHHH--TCCEEEE-------SCHHHHHHHTCSEEEECTTS
T ss_pred HHHHHHHHHCCCCEEEEecCCCCHhHHHHHHHHHHHHHHHHHHc--CCeEEEc-------CHHHHHHHcCCCEEEECCCc
Confidence 45688899999999987742 233343 333 3333322 3444442 334444444 7999985433
Q ss_pred ccccCChHHHHHHHHHHHHHHHHcCC-cEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 313 LAVATSVEVTFLAQKMIAARCNKQGK-PFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 313 Lg~e~~~e~v~~~qk~ii~~c~~~gK-Pvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
+ + +...++..|. .+.+.+. | . .++..+...|+|.++++
T Consensus 105 ~--~------------~~~~~~~~g~~~~~~s~~-----t---~--------~e~~~a~~~g~d~v~~~ 143 (227)
T 2tps_A 105 A--N------------AKEVRAAIGDMILGVSAH-----T---M--------SEVKQAEEDGADYVGLG 143 (227)
T ss_dssp S--C------------HHHHHHHHTTSEEEEEEC-----S---H--------HHHHHHHHHTCSEEEEC
T ss_pred c--C------------HHHHHHhcCCcEEEEecC-----C---H--------HHHHHHHhCCCCEEEEC
Confidence 2 1 1222334564 3333211 1 2 44456677899999985
No 271
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=53.55 E-value=60 Score=31.11 Aligned_cols=101 Identities=12% Similarity=0.031 Sum_probs=58.9
Q ss_pred HHHHHHHHHcCCcEEEEcccC----------ChhhHHHHHHHHHhcCCCceEEEE-------ecC------HHHHhhHHH
Q psy6272 242 KHVVDLIVREAVDIIIMSSVT----------GANSIREMRGMLEDHVDRVLILAK-------IET------LLGMEYMDE 298 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~----------sa~di~~~r~~l~~~~~~i~Iiak-------IEt------~~av~nlde 298 (547)
.+.++.+.+.|+|+|-+.+-. +.++++++++.+++.|-.+..+.- +-+ .++++.+..
T Consensus 33 ~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~ 112 (295)
T 3cqj_A 33 LERLQLAKTLGFDFVEMSVDETDERLSRLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRK 112 (295)
T ss_dssp HHHHHHHHHTTCSEEEEECCSSHHHHGGGGCCHHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEecCCcccccCcccCCHHHHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHHHHHHHHHHHH
Confidence 445788999999999997654 467788999999887655433321 101 123445555
Q ss_pred HHhh-----cCEEEEcCCcccccC----ChHHHHHHHHHHHHHHHHcCCcEEE
Q psy6272 299 IIME-----SDGVVLNRIQLAVAT----SVEVTFLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 299 Il~~-----~DgImIargDLg~e~----~~e~v~~~qk~ii~~c~~~gKPvi~ 342 (547)
.+.. ++.|.+..++-.... .++.+...-+++...|.++|..+.+
T Consensus 113 ~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 165 (295)
T 3cqj_A 113 AIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAM 165 (295)
T ss_dssp HHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 5544 255555433321111 1234444556666777777776655
No 272
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=53.51 E-value=17 Score=39.07 Aligned_cols=50 Identities=18% Similarity=0.298 Sum_probs=40.9
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHHH
Q psy6272 54 LTNIMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKLA 104 (547)
Q Consensus 54 ~tkIi~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~a 104 (547)
+..+-+.+|...++.+.++.|+++|+++.=|| +|+......+ +++.+|+.
T Consensus 217 rl~v~aavG~~~~~~~~a~~l~~aG~d~I~id~a~g~~~~~~~-~v~~i~~~ 267 (490)
T 4avf_A 217 RLRVGAAVGTGADTGERVAALVAAGVDVVVVDTAHGHSKGVIE-RVRWVKQT 267 (490)
T ss_dssp CBCCEEEECSSTTHHHHHHHHHHTTCSEEEEECSCCSBHHHHH-HHHHHHHH
T ss_pred cceeeeeeccccchHHHHHHHhhcccceEEecccCCcchhHHH-HHHHHHHH
Confidence 45566677887788999999999999999999 9998777766 77777653
No 273
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=53.50 E-value=71 Score=37.68 Aligned_cols=122 Identities=16% Similarity=0.139 Sum_probs=79.6
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcC---------------------------------CCceEEEEec
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHV---------------------------------DRVLILAKIE 288 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~---------------------------------~~i~IiakIE 288 (547)
.+.++.|.+.|.+.|++.=-.+...+.++.+.....| .++.++| +
T Consensus 135 ~eLv~~A~~~G~~aiAITDH~~~~G~~~~~~~a~~~gIk~I~G~E~~~~~~~~~~~~~~~~~~~~~~~~~~hlvlLA--k 212 (1041)
T 3f2b_A 135 TKLIEQAKKWGHPAIAVTDHAVVQSFPEAYSAAKKHGMKVIYGLEANIVDDGVPIAYNETHRRLGSGSGPFHVTLLA--Q 212 (1041)
T ss_dssp HHHHHHHHHTTCSCEEECCBSCCTTHHHHHHHHHHHTCCEEEEEEEEEECC------------------CEEEEEEE--C
T ss_pred HHHHHHHHHCCCCEEEEecccchhhHHHHHHHHHHCCCEEEEEEEEEEEeCCcccccccccccccccCCCceEEEEe--C
Confidence 4457899999999999986666655555544332111 1334444 4
Q ss_pred CHHHHhhHHHHHhhc--------------------CEEEEcCCcccccCC-------------------------h----
Q psy6272 289 TLLGMEYMDEIIMES--------------------DGVVLNRIQLAVATS-------------------------V---- 319 (547)
Q Consensus 289 t~~av~nldeIl~~~--------------------DgImIargDLg~e~~-------------------------~---- 319 (547)
+.+|..||-.++..+ +|++++.|-+.-++. .
T Consensus 213 N~~Gy~nL~kLvS~a~~~~~~~~pri~~~~L~~~~egLi~~s~c~~Gev~~~l~~~~~~~a~~~~~~y~ylei~~~~~~~ 292 (1041)
T 3f2b_A 213 NETGLKNLFKLVSLSHIQYFHRVPRIPRSVLVKHRDGLLVGSGCDKGELFDNLIQKAPEEVEDIARFYDFLEVHPPDVYK 292 (1041)
T ss_dssp SHHHHHHHHHHHHHHHTTTCSSSCCEEHHHHHHTCTTEEEECCSSSSSSTTC--------CCTTGGGCSBEEECCGGGGC
T ss_pred CHHHHHHHHHHHHHHHHhcccCCCCcCHHHHHhccCCeEEEcCccccHHHHHHhcCCHHHHHHHHHHhhHHHhcCccccH
Confidence 899999998888752 578777654322211 0
Q ss_pred -----------HHHHHHHHHHHHHHHHcCCcEEEEcCCCC-CCCcccccccCccchhhHHHHHHhC
Q psy6272 320 -----------EVTFLAQKMIAARCNKQGKPFLVVGDILP-DHNVEEYSDVSIGDMNDVNSIVQDG 373 (547)
Q Consensus 320 -----------e~v~~~qk~ii~~c~~~gKPvi~aTq~Le-~PtraE~~~~~~~~~~Dv~nav~~g 373 (547)
+....+.+.+++.+++.|+|++....+.- .|.+++. .|+..++.-|
T Consensus 293 ~l~~~~~~~~~~~~~~~~~~l~~la~~~~~p~VAT~dvhy~~~ed~~~--------~dvL~~~~~~ 350 (1041)
T 3f2b_A 293 PLIEMDYVKDEEMIKNIIRSIVALGEKLDIPVVATGNVHYLNPEDKIY--------RKILIHSQGG 350 (1041)
T ss_dssp CC----CCSCHHHHHHHHHHHHHHHHHTTCCEEECCCBSBSSGGGHHH--------HHHHHHTTGG
T ss_pred HHHhccCCCcHHHHHHHHHHHHHHHHHcCCCEEEeCCceecCHhhHHH--------HHHHHhhccc
Confidence 12334567899999999999886544433 7887777 8887765444
No 274
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=53.49 E-value=36 Score=31.74 Aligned_cols=87 Identities=13% Similarity=0.163 Sum_probs=51.4
Q ss_pred HHHHHHHHHcCCcEEEEcccCC-----hhhHHHHHHHHHhcCCCceEEE--EecCHHHHhhHHHHHhh-cCEEEEcCCcc
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTG-----ANSIREMRGMLEDHVDRVLILA--KIETLLGMEYMDEIIME-SDGVVLNRIQL 313 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~s-----a~di~~~r~~l~~~~~~i~Iia--kIEt~~av~nldeIl~~-~DgImIargDL 313 (547)
.+.++.+.+.|+|+|.+..+.. .-+...++++.+.. ++.|++ -|-+ .+|+.+.++. +||+++|++=+
T Consensus 157 ~e~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~--~~pvia~GGi~~---~~~~~~~~~~Ga~~v~vgsal~ 231 (253)
T 1h5y_A 157 VKWAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSV--RIPVIASGGAGR---VEHFYEAAAAGADAVLAASLFH 231 (253)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHHC--SSCEEEESCCCS---HHHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHhc--CCCEEEeCCCCC---HHHHHHHHHcCCcHHHHHHHHH
Confidence 4457788899999998855442 11334444433322 455655 3443 3566666665 89999998655
Q ss_pred cccCChHHHHHHHHHHHHHHHHcCCcE
Q psy6272 314 AVATSVEVTFLAQKMIAARCNKQGKPF 340 (547)
Q Consensus 314 g~e~~~e~v~~~qk~ii~~c~~~gKPv 340 (547)
....+++ ++.+.++++|.|+
T Consensus 232 ~~~~~~~-------~~~~~l~~~g~~~ 251 (253)
T 1h5y_A 232 FRVLSIA-------QVKRYLKERGVEV 251 (253)
T ss_dssp TTSSCHH-------HHHHHHHHTTCBC
T ss_pred cCCCCHH-------HHHHHHHHcCCCC
Confidence 4443432 3444456777764
No 275
>2yr1_A 3-dehydroquinate dehydratase; amino acid biosynthesis, 3-dehydroquinase, structural genomi NPPSFA; 2.00A {Geobacillus kaustophilus}
Probab=53.46 E-value=1.5e+02 Score=28.79 Aligned_cols=133 Identities=12% Similarity=0.056 Sum_probs=77.4
Q ss_pred CCcCCCCCChhh-HHHHHHHHHcCCcEEEE--cc---cCChhhHHHHHHHHHhcCCCceEEEEecCH------------H
Q psy6272 230 VTFNLPVIADRD-KHVVDLIVREAVDIIIM--SS---VTGANSIREMRGMLEDHVDRVLILAKIETL------------L 291 (547)
Q Consensus 230 ~~~~lp~lt~~D-~~di~~~~~~g~d~I~~--sf---V~sa~di~~~r~~l~~~~~~i~IiakIEt~------------~ 291 (547)
+.+++..-+..+ ...+..+.+.|+|.|=+ =+ ..+.+++.+....|.+.-.++.||.-+-|. +
T Consensus 22 Icv~l~~~~~~e~~~~~~~~~~~~~D~vElRvD~l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~ 101 (257)
T 2yr1_A 22 ICAPVVGEDDRKVLREAEEVCRKQPDLLEWRADFFRAIDDQERVLATANGLRNIAGEIPILFTIRSEREGGQPIPLNEAE 101 (257)
T ss_dssp EEEEECCSSHHHHHHHHHHHHHSCCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHSSSCCEEEECCCTTTTCCCCSSCHHH
T ss_pred EEEEecCCCHHHHHHHHHHHhhcCCCEEEEEeecccccCcHHHHHHHHHHHHHhccCCCEEEEEeecccCCCCCCCCHHH
Confidence 344444434444 35566677889998754 22 334444444444443332356777766432 2
Q ss_pred HHhhHHHHHhh--cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCC-CCCcccccccCccchhhH-H
Q psy6272 292 GMEYMDEIIME--SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILP-DHNVEEYSDVSIGDMNDV-N 367 (547)
Q Consensus 292 av~nldeIl~~--~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le-~PtraE~~~~~~~~~~Dv-~ 367 (547)
-++-+...++. +|.|= +|+..++ ..+++++.+++.|..+|.+-+-++ .|+..|+ ... .
T Consensus 102 ~~~ll~~~~~~g~~d~iD-------vEl~~~~---~~~~l~~~~~~~~~kvI~S~Hdf~~tP~~~el--------~~~~~ 163 (257)
T 2yr1_A 102 VRRLIEAICRSGAIDLVD-------YELAYGE---RIADVRRMTEECSVWLVVSRHYFDGTPRKETL--------LADMR 163 (257)
T ss_dssp HHHHHHHHHHHTCCSEEE-------EEGGGTT---HHHHHHHHHHHTTCEEEEEEEESSCCCCHHHH--------HHHHH
T ss_pred HHHHHHHHHHcCCCCEEE-------EECCCCh---hHHHHHHHHHhCCCEEEEEecCCCCCcCHHHH--------HHHHH
Confidence 33444555543 45443 2333333 455688888999999999988777 7876676 443 3
Q ss_pred HHHHhCccEEeeC
Q psy6272 368 SIVQDGADVVVLT 380 (547)
Q Consensus 368 nav~~g~D~vmLs 380 (547)
.+...|+|.+=+.
T Consensus 164 ~~~~~gaDivKia 176 (257)
T 2yr1_A 164 QAERYGADIAKVA 176 (257)
T ss_dssp HHHHTTCSEEEEE
T ss_pred HHHhcCCCEEEEE
Confidence 5666788877665
No 276
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=53.14 E-value=25 Score=35.55 Aligned_cols=95 Identities=9% Similarity=0.062 Sum_probs=51.5
Q ss_pred HHHHHHHHHcCCcEEEEccc-----------CC-----------hhhHHHHHHHHHhcCCCceEEE--EecCHHHHhhHH
Q psy6272 242 KHVVDLIVREAVDIIIMSSV-----------TG-----------ANSIREMRGMLEDHVDRVLILA--KIETLLGMEYMD 297 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV-----------~s-----------a~di~~~r~~l~~~~~~i~Iia--kIEt~~av~nld 297 (547)
.++++.+.+.|+|+|.++.- +. ......+++..... .++.||+ -|-|.+-+...
T Consensus 192 ~~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~~~~l~~v~~~~-~~ipvia~GGI~~~~d~~k~- 269 (349)
T 1p0k_A 192 KASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGISTAASLAEIRSEF-PASTMIASGGLQDALDVAKA- 269 (349)
T ss_dssp HHHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCHHHHHHHHHHHC-TTSEEEEESSCCSHHHHHHH-
T ss_pred HHHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccHHHHHHHHHHhc-CCCeEEEECCCCCHHHHHHH-
Confidence 46678899999999999721 10 11222333333322 3577777 34443333221
Q ss_pred HHHhhcCEEEEcCCcccccC--Ch----HHHHHHHHHHHHHHHHcCCc
Q psy6272 298 EIIMESDGVVLNRIQLAVAT--SV----EVTFLAQKMIAARCNKQGKP 339 (547)
Q Consensus 298 eIl~~~DgImIargDLg~e~--~~----e~v~~~qk~ii~~c~~~gKP 339 (547)
|..-+|+|+|||.=+-... |. +.+..+.+.+-..+...|..
T Consensus 270 -l~~GAd~V~iG~~~l~~~~~~g~~~~~~~~~~~~~~l~~~m~~~G~~ 316 (349)
T 1p0k_A 270 -IALGASCTGMAGHFLKALTDSGEEGLLEEIQLILEELKLIMTVLGAR 316 (349)
T ss_dssp -HHTTCSEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred -HHcCCCEEEEcHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 2223899999997654321 33 23344555555556666654
No 277
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=52.59 E-value=1.5e+02 Score=29.80 Aligned_cols=98 Identities=15% Similarity=0.234 Sum_probs=54.7
Q ss_pred cCCCceEEEEecCHHHHhhHHHHHhh--------cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHc-CCcEEEEcCCC
Q psy6272 277 HVDRVLILAKIETLLGMEYMDEIIME--------SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQ-GKPFLVVGDIL 347 (547)
Q Consensus 277 ~~~~i~IiakIEt~~av~nldeIl~~--------~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~-gKPvi~aTq~L 347 (547)
.+.++.|+|..|... ..-+||-++- +|+||+- | + ...++ |-+.|++. ++|+.+ .|+
T Consensus 151 ~~~d~~I~ARTDa~~-~~gldeAi~Ra~ay~eAGAD~ifi~-g-~---~~~~e-------i~~~~~~~~~~Pl~~--n~~ 215 (302)
T 3fa4_A 151 IGSDIVVIARTDSLQ-THGYEESVARLRAARDAGADVGFLE-G-I---TSREM-------ARQVIQDLAGWPLLL--NMV 215 (302)
T ss_dssp HTCCCEEEEEECCHH-HHCHHHHHHHHHHHHTTTCSEEEET-T-C---CCHHH-------HHHHHHHTTTSCEEE--ECC
T ss_pred cCCCEEEEEEecccc-cCCHHHHHHHHHHHHHcCCCEEeec-C-C---CCHHH-------HHHHHHHhcCCceeE--EEe
Confidence 367889999999863 2344444433 6999985 2 1 11222 33445555 589865 455
Q ss_pred CCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHh
Q psy6272 348 PDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKT 399 (547)
Q Consensus 348 e~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~a 399 (547)
+.+.-... .+...-..|+..+... .-...-+.+.|.+.++++
T Consensus 216 ~~g~~p~~---------~~~eL~~lGv~~v~~~-~~~~raa~~A~~~~~~~i 257 (302)
T 3fa4_A 216 EHGATPSI---------SAAEAKEMGFRIIIFP-FAALGPAVAAMREAMEKL 257 (302)
T ss_dssp TTSSSCCC---------CHHHHHHHTCSEEEET-TTTHHHHHHHHHHHHHHH
T ss_pred cCCCCCCC---------CHHHHHHcCCCEEEEc-hHHHHHHHHHHHHHHHHH
Confidence 41111111 1122233499888887 555556666666666655
No 278
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=52.58 E-value=12 Score=40.90 Aligned_cols=50 Identities=22% Similarity=0.436 Sum_probs=41.4
Q ss_pred CceEEEecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHHH
Q psy6272 54 LTNIMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKLA 104 (547)
Q Consensus 54 ~tkIi~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~a 104 (547)
+-.+=+.+|-..++.+-+..|+++|+|+.=|+ |||..+...+ +++.||+.
T Consensus 269 rL~VgAAVgv~~d~~eR~~aLv~AGvD~iviD~ahGhs~~v~~-~i~~ik~~ 319 (556)
T 4af0_A 269 QLYCGAAIGTRPGDKDRLKLLAEAGLDVVVLDSSQGNSVYQIE-FIKWIKQT 319 (556)
T ss_dssp CBCCEEEECSSHHHHHHHHHHHHTTCCEEEECCSCCCSHHHHH-HHHHHHHH
T ss_pred ceeeEEEeccCccHHHHHHHHHhcCCcEEEEeccccccHHHHH-HHHHHHhh
Confidence 44566777766677899999999999999999 9999888887 88888763
No 279
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=52.49 E-value=1.3e+02 Score=29.94 Aligned_cols=109 Identities=15% Similarity=0.117 Sum_probs=60.1
Q ss_pred hHHHHHHHHHcCC-cEEEEcccCChhhHHHHHHHHHhcCCCceEEEEec--CHHHHhhHHHHHhh-cCEEEEcCCccccc
Q psy6272 241 DKHVVDLIVREAV-DIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIE--TLLGMEYMDEIIME-SDGVVLNRIQLAVA 316 (547)
Q Consensus 241 D~~di~~~~~~g~-d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIE--t~~av~nldeIl~~-~DgImIargDLg~e 316 (547)
+.+....+.+.|. .+|...++ +++.+.+..+.+.+..+. .+.+.+= ++.--+.++...+. +|+|.++-|.
T Consensus 25 ~~~la~av~~aG~lG~i~~~~~-~~~~~~~~i~~i~~~~~~-p~gvnl~~~~~~~~~~~~~a~~~g~d~V~~~~g~---- 98 (332)
T 2z6i_A 25 DGDLAGAVSKAGGLGIIGGGNA-PKEVVKANIDKIKSLTDK-PFGVNIMLLSPFVEDIVDLVIEEGVKVVTTGAGN---- 98 (332)
T ss_dssp CHHHHHHHHHHTSBEEEECTTC-CHHHHHHHHHHHHHHCCS-CEEEEECTTSTTHHHHHHHHHHTTCSEEEECSSC----
T ss_pred cHHHHHHHHhCCCcEEeCCCCC-CHHHHHHHHHHHHHhcCC-CEEEEecCCCCCHHHHHHHHHHCCCCEEEECCCC----
Confidence 4556677778886 55555554 555554433333322222 2223321 22212223333333 6999998652
Q ss_pred CChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 317 TSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 317 ~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
| ..+++.+++.|.|++.... + . .++..+...|+|.+.+.
T Consensus 99 -p--------~~~i~~l~~~g~~v~~~v~-----~---~--------~~a~~~~~~GaD~i~v~ 137 (332)
T 2z6i_A 99 -P--------SKYMERFHEAGIIVIPVVP-----S---V--------ALAKRMEKIGADAVIAE 137 (332)
T ss_dssp -G--------GGTHHHHHHTTCEEEEEES-----S---H--------HHHHHHHHTTCSCEEEE
T ss_pred -h--------HHHHHHHHHcCCeEEEEeC-----C---H--------HHHHHHHHcCCCEEEEE
Confidence 2 1256667778999986421 1 2 44456777899999995
No 280
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=52.41 E-value=17 Score=39.03 Aligned_cols=49 Identities=18% Similarity=0.396 Sum_probs=39.6
Q ss_pred ceEEEecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHHH
Q psy6272 55 TNIMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKLA 104 (547)
Q Consensus 55 tkIi~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~a 104 (547)
-.+.+.+|......+.++.++++|+++.=|| +||.+..+.+ +++.+|+.
T Consensus 244 l~vga~vG~~~~~~~~a~~~~~aG~d~v~i~~~~G~~~~~~~-~i~~i~~~ 293 (514)
T 1jcn_A 244 LLCGAAVGTREDDKYRLDLLTQAGVDVIVLDSSQGNSVYQIA-MVHYIKQK 293 (514)
T ss_dssp BCCEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCCSHHHHH-HHHHHHHH
T ss_pred eeeeeEecCchhhHHHHHHHHHcCCCEEEeeccCCcchhHHH-HHHHHHHh
Confidence 3455667776677899999999999999999 9998876666 77777764
No 281
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=52.36 E-value=59 Score=32.40 Aligned_cols=128 Identities=16% Similarity=0.129 Sum_probs=66.4
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHH----HHHHHHHHHHHHhhhhhh
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAH----HRVDILKEILKKTESVLW 404 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~----eaV~~m~~I~~~aE~~~~ 404 (547)
+...|++.|.++.+.. |......+-....-.-+...-..|++.+... +..-. .+.+...++..+-...++
T Consensus 84 lA~~a~~~G~~~~iv~-----p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~-~~~~~~~~~~~~~~a~~l~~~~~~~~~ 157 (338)
T 1tzj_A 84 VAAVAAHLGMKCVLVQ-----ENWVNYSDAVYDRVGNIQMSRILGADVRLVP-DGFDIGFRRSWEDALESVRAAGGKPYA 157 (338)
T ss_dssp HHHHHHHHTCEEEEEE-----ECCSSCCCTTTTTSHHHHHHHHTTCEEEECC-C-------CHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHhCCceEEEe-----cCCCCccccccccCccHHHHHhCCCEEEEeC-CcchhhHHHHHHHHHHHHHhcCCceEE
Confidence 5567899999988752 2211100000000013444556799988876 43321 123333333322111111
Q ss_pred hHHH-HHHhhhcCCCCCChhhHHHHHHHHHHHhc-----CCcEEEEEcCCchHHHHHHhc-----CCCCCEEEEeCch
Q psy6272 405 EKQV-FEDLCALACPPLDPAHSIVIACVNAALKC-----QAVAIIVITCSGYSAKLVSKY-----RPQCPILAVSSLG 471 (547)
Q Consensus 405 ~~~~-f~~~~~~~~~~~~~~~~ia~aav~~a~~~-----~a~aIvv~T~sG~tA~~isk~-----RP~~pIiavt~~~ 471 (547)
+..- |. .+. ....-...+.|+..++ ..++||+.+-+|.|+.-++++ .|. .|++|.+..
T Consensus 158 ~p~~~~~-------n~~-~~~g~~t~~~Ei~~q~~~~~~~~d~vv~~vG~GGt~~Gi~~~~k~~g~~~-~vigve~~~ 226 (338)
T 1tzj_A 158 IPAGCSD-------HPL-GGLGFVGFAEEVRAQEAELGFKFDYVVVCSVTGSTQAGMVVGFAADGRAD-RVIGVDASA 226 (338)
T ss_dssp CCGGGTS-------STT-TTTHHHHHHHHHHHHHHHHTSCCSEEEEEESSSHHHHHHHHHHHTTTCGG-GEEEEECSS
T ss_pred eCCCcCC-------Ccc-cHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhCCCC-eEEEEEccC
Confidence 1110 11 111 1122234455666554 579999999999998877753 688 999999854
No 282
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=52.18 E-value=1e+02 Score=30.35 Aligned_cols=116 Identities=18% Similarity=0.108 Sum_probs=69.3
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHhhhhhhhHHH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQV 408 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~aE~~~~~~~~ 408 (547)
+...|++.|.++.+. .|..... ..+...-..|++.+... +. -.++.+...++..+-... +-
T Consensus 80 lA~~a~~~G~~~~iv-----~p~~~~~--------~k~~~~~~~GA~V~~~~-~~-~~~~~~~a~~~~~~~~~~-~~--- 140 (311)
T 1ve5_A 80 VAYAAQVLGVKALVV-----MPEDASP--------YKKACARAYGAEVVDRG-VT-AKNREEVARALQEETGYA-LI--- 140 (311)
T ss_dssp HHHHHHHHTCCEEEE-----CCCC--C--------CHHHHHHHTTCEEECTT-CC-TTTHHHHHHHHHHHHCCE-EC---
T ss_pred HHHHHHHcCCCEEEE-----ECCCCCH--------HHHHHHHHcCCEEEEEC-CC-HHHHHHHHHHHHHhcCcE-ec---
Confidence 567789999999885 4433222 34455566799988766 43 225555555554432111 10
Q ss_pred HHHhhhcCCCCCCh--hhHHHHHHHHHHHhc-----CCcEEEEEcCCchHHHHHHh----cCCCCCEEEEeCch
Q psy6272 409 FEDLCALACPPLDP--AHSIVIACVNAALKC-----QAVAIIVITCSGYSAKLVSK----YRPQCPILAVSSLG 471 (547)
Q Consensus 409 f~~~~~~~~~~~~~--~~~ia~aav~~a~~~-----~a~aIvv~T~sG~tA~~isk----~RP~~pIiavt~~~ 471 (547)
.+..++ ...-...+.|+..++ +.++|++.+-+|.++--+++ ..|...|++|.+..
T Consensus 141 --------~~~~n~~~~~g~~t~~~Ei~~q~~~~~~~~d~vvvpvG~Gg~~~Gi~~~~k~~~~~~~vigve~~~ 206 (311)
T 1ve5_A 141 --------HPFDDPLVIAGQGTAGLELLAQAGRMGVFPGAVLAPVGGGGLLAGLATAVKALSPTTLVLGVEPEA 206 (311)
T ss_dssp --------CSSSSHHHHHHHHHHHHHHHHHHHHHTCCCSEEEEECSSSHHHHHHHHHHHHHCTTSEEEEEEEGG
T ss_pred --------CCCCCcchhhhccHHHHHHHHHHHhcCCCCCEEEEccCchHHHHHHHHHHHHhCCCCEEEEEEeCC
Confidence 011111 122233345555554 47999999999999776664 47999999999864
No 283
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=52.14 E-value=33 Score=34.53 Aligned_cols=67 Identities=9% Similarity=0.073 Sum_probs=44.5
Q ss_pred cCEEEEcCC-----cccccC--ChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHh--C
Q psy6272 303 SDGVVLNRI-----QLAVAT--SVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQD--G 373 (547)
Q Consensus 303 ~DgImIarg-----DLg~e~--~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~--g 373 (547)
+|.|.+-+| .+|... ..++-+....++.+++++.++-+++-+. ----++- .|+..++.. |
T Consensus 184 pDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~---gGpIstp--------eDv~~~l~~t~G 252 (286)
T 2p10_A 184 ADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSH---GGPIANP--------EDARFILDSCQG 252 (286)
T ss_dssp CSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEE---STTCCSH--------HHHHHHHHHCTT
T ss_pred CCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEec---CCCCCCH--------HHHHHHHhcCCC
Confidence 588888777 445443 3467566777799999999876665443 1011233 899999988 9
Q ss_pred ccEEeeC
Q psy6272 374 ADVVVLT 380 (547)
Q Consensus 374 ~D~vmLs 380 (547)
+|++...
T Consensus 253 ~~G~~gA 259 (286)
T 2p10_A 253 CHGFYGA 259 (286)
T ss_dssp CCEEEES
T ss_pred ccEEEee
Confidence 9999997
No 284
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=52.00 E-value=87 Score=30.07 Aligned_cols=94 Identities=7% Similarity=0.118 Sum_probs=51.2
Q ss_pred hhhHHHHHHHHHcCCcEEEEc--cc---C-----------------ChhhHHHHHHHHHhcCCCceEEEEe-cCHHHHhh
Q psy6272 239 DRDKHVVDLIVREAVDIIIMS--SV---T-----------------GANSIREMRGMLEDHVDRVLILAKI-ETLLGMEY 295 (547)
Q Consensus 239 ~~D~~di~~~~~~g~d~I~~s--fV---~-----------------sa~di~~~r~~l~~~~~~i~IiakI-Et~~av~n 295 (547)
+.-.+.++.+.+.|+|+|-+- |- - +.++...+.+.+.+. .++.++.+. .++.-...
T Consensus 32 ~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-~~~Pv~~m~~~~~~~~~~ 110 (262)
T 1rd5_A 32 ATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCPVVLLSYYKPIMFRS 110 (262)
T ss_dssp HHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-CSSCEEEECCSHHHHSCC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEEecCcHHHHHH
Confidence 444666778889999998873 32 1 122222222223222 345666653 22211112
Q ss_pred HHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 296 MDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 296 ldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
++...+. +||+++. |+..+ + -.+++..|+++|.+.+..
T Consensus 111 ~~~a~~aGadgv~v~--d~~~~----~----~~~~~~~~~~~g~~~i~~ 149 (262)
T 1rd5_A 111 LAKMKEAGVHGLIVP--DLPYV----A----AHSLWSEAKNNNLELVLL 149 (262)
T ss_dssp THHHHHTTCCEEECT--TCBTT----T----HHHHHHHHHHTTCEECEE
T ss_pred HHHHHHcCCCEEEEc--CCChh----h----HHHHHHHHHHcCCceEEE
Confidence 3334444 6999984 66642 2 345777899999886653
No 285
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=52.00 E-value=97 Score=31.84 Aligned_cols=114 Identities=11% Similarity=0.071 Sum_probs=65.9
Q ss_pred CCChhhHHHH--------HHHHHcCCcEEEEccc-------------CCh----------------hhHHHHHHHHHhcC
Q psy6272 236 VIADRDKHVV--------DLIVREAVDIIIMSSV-------------TGA----------------NSIREMRGMLEDHV 278 (547)
Q Consensus 236 ~lt~~D~~di--------~~~~~~g~d~I~~sfV-------------~sa----------------~di~~~r~~l~~~~ 278 (547)
.||..|++.+ +.|.+.|+|+|=+-.- +.. +-++++|+.+ +
T Consensus 150 ~mt~~eI~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~v---g 226 (361)
T 3gka_A 150 ALELDEIPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVW---S 226 (361)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHH---C
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHc---C
Confidence 5788888776 4678899999988543 221 2223333333 4
Q ss_pred CCceEEEEecCHH---------HHhhHHHHHhh-----cCEEEEcCCcccccCChHHHHHHHHHHHHHH-HHcCCcEEEE
Q psy6272 279 DRVLILAKIETLL---------GMEYMDEIIME-----SDGVVLNRIQLAVATSVEVTFLAQKMIAARC-NKQGKPFLVV 343 (547)
Q Consensus 279 ~~i~IiakIEt~~---------av~nldeIl~~-----~DgImIargDLg~e~~~e~v~~~qk~ii~~c-~~~gKPvi~a 343 (547)
.+ .|..||=-.+ .++...++++. .|.|=+..|..+ .+ .++.. +..++|||..
T Consensus 227 ~~-~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~----~~--------~~~~ik~~~~iPvi~~ 293 (361)
T 3gka_A 227 AA-RVGVHLAPRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFGG----DA--------IGQQLKAAFGGPFIVN 293 (361)
T ss_dssp GG-GEEEEECTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCST----TC--------CHHHHHHHHCSCEEEE
T ss_pred CC-eEEEecccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCCC----HH--------HHHHHHHHcCCCEEEe
Confidence 44 6777874321 12333334333 588877666522 11 12222 2347899987
Q ss_pred cCCCCCCCcccccccCccchhhHHHHHHhC-ccEEeeC
Q psy6272 344 GDILPDHNVEEYSDVSIGDMNDVNSIVQDG-ADVVVLT 380 (547)
Q Consensus 344 Tq~Le~PtraE~~~~~~~~~~Dv~nav~~g-~D~vmLs 380 (547)
..+ | . .++..++..| +|.|++.
T Consensus 294 Ggi----t---~--------e~a~~~l~~G~aD~V~iG 316 (361)
T 3gka_A 294 ENF----T---L--------DSAQAALDAGQADAVAWG 316 (361)
T ss_dssp SSC----C---H--------HHHHHHHHTTSCSEEEES
T ss_pred CCC----C---H--------HHHHHHHHcCCccEEEEC
Confidence 552 2 2 4455678887 9999998
No 286
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=52.00 E-value=58 Score=31.56 Aligned_cols=97 Identities=9% Similarity=0.015 Sum_probs=59.6
Q ss_pred HHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCC
Q psy6272 269 EMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDIL 347 (547)
Q Consensus 269 ~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~L 347 (547)
.+++.|.+....+..+..+.+++-++.+ ... +|.+++..-|- +.+ -..++. .+..+...|+|+++=+.
T Consensus 9 ~~k~~l~~g~~~~~~~l~v~~p~~~e~a---~~~gaD~v~lDlEd~----p~~-~~~a~~-~~~~~~~~~~~~~VRv~-- 77 (256)
T 1dxe_A 9 KFKAALAAKQVQIGCWSALSNPISTEVL---GLAGFDWLVLDGEHA----PND-ISTFIP-QLMALKGSASAPVVRVP-- 77 (256)
T ss_dssp HHHHHHHTTCCEEEEEECSCSHHHHHHH---TTSCCSEEEEESSSS----SCC-HHHHHH-HHHHTTTCSSEEEEECS--
T ss_pred HHHHHHHCCCCeEEEEEeCCCHHHHHHH---HhCCCCEEEEcCCCC----CCC-HHHHHH-HHHHHHhCCCcEEEECC--
Confidence 3666665422346778888666655432 222 69999998885 222 222333 22334457888888332
Q ss_pred CCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHH
Q psy6272 348 PDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHR 388 (547)
Q Consensus 348 e~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~ea 388 (547)
-.+- .++..++..|+|+||+.|-+|+-|+
T Consensus 78 ----~~~~--------~~i~~~l~~g~~gI~~P~V~s~~ev 106 (256)
T 1dxe_A 78 ----TNEP--------VIIKRLLDIGFYNFLIPFVETKEEA 106 (256)
T ss_dssp ----SSCH--------HHHHHHHHTTCCEEEESCCCSHHHH
T ss_pred ----CCCH--------HHHHHHHhcCCceeeecCcCCHHHH
Confidence 1122 4466677779999999999988866
No 287
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=51.93 E-value=1e+02 Score=28.20 Aligned_cols=113 Identities=19% Similarity=0.249 Sum_probs=64.4
Q ss_pred HHHHHHHHHcCCcEEEEc--c--cCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhh-HHHHHhh-cCEEEEcCCcccc
Q psy6272 242 KHVVDLIVREAVDIIIMS--S--VTGANSIREMRGMLEDHVDRVLILAKIETLLGMEY-MDEIIME-SDGVVLNRIQLAV 315 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s--f--V~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~n-ldeIl~~-~DgImIargDLg~ 315 (547)
.+.++.. ..|+|+|.+- | -...+.++++|+. ..+..+.+-.=...+.+. +++.... +|+|.+. ++.
T Consensus 16 ~~~~~~~-~~~~diie~G~p~~~~~g~~~i~~ir~~----~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~--~~~- 87 (211)
T 3f4w_A 16 MVFMDKV-VDDVDIIEVGTPFLIREGVNAIKAIKEK----YPHKEVLADAKIMDGGHFESQLLFDAGADYVTVL--GVT- 87 (211)
T ss_dssp HHHHHHH-GGGCSEEEECHHHHHHHTTHHHHHHHHH----CTTSEEEEEEEECSCHHHHHHHHHHTTCSEEEEE--TTS-
T ss_pred HHHHHHh-hcCccEEEeCcHHHHhccHHHHHHHHHh----CCCCEEEEEEEeccchHHHHHHHHhcCCCEEEEe--CCC-
Confidence 4444443 4589997764 4 2334555555553 224555553322334455 5666665 7999994 332
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 316 ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 316 e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
+. ..-+.+++.|+++|+++++. ++ .|+- -. ..+..+...|+|.+.+.
T Consensus 88 --~~----~~~~~~~~~~~~~g~~~~v~--~~-~~~t-~~--------~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 88 --DV----LTIQSCIRAAKEAGKQVVVD--MI-CVDD-LP--------ARVRLLEEAGADMLAVH 134 (211)
T ss_dssp --CH----HHHHHHHHHHHHHTCEEEEE--CT-TCSS-HH--------HHHHHHHHHTCCEEEEE
T ss_pred --Ch----hHHHHHHHHHHHcCCeEEEE--ec-CCCC-HH--------HHHHHHHHcCCCEEEEc
Confidence 11 22256788899999999873 22 2321 01 23456777899998775
No 288
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=51.90 E-value=1.1e+02 Score=31.51 Aligned_cols=35 Identities=29% Similarity=0.417 Sum_probs=26.7
Q ss_pred HcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcch
Q psy6272 335 KQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQ 384 (547)
Q Consensus 335 ~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Et 384 (547)
..+.|||....+- -. .|+..++..|||++++. ..-
T Consensus 276 ~~~~pVia~GGI~------~~--------~dv~kal~~GAdaV~iG-r~~ 310 (380)
T 1p4c_A 276 KTGKPVLIDSGFR------RG--------SDIVKALALGAEAVLLG-RAT 310 (380)
T ss_dssp HHCSCEEECSSCC------SH--------HHHHHHHHTTCSCEEES-HHH
T ss_pred HcCCeEEEECCCC------CH--------HHHHHHHHhCCcHhheh-HHH
Confidence 3467999876632 23 79999999999999998 443
No 289
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=51.49 E-value=1.4e+02 Score=27.97 Aligned_cols=99 Identities=8% Similarity=0.006 Sum_probs=56.4
Q ss_pred HHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEec-------CHHHHhhHHHHHhhcCEEEEcCCcccc
Q psy6272 243 HVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIE-------TLLGMEYMDEIIMESDGVVLNRIQLAV 315 (547)
Q Consensus 243 ~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIE-------t~~av~nldeIl~~~DgImIargDLg~ 315 (547)
+.++.+.+.|++.++++-. +.++.+.+.++..+.. ++...+-+= +.+.++.|++.+...-. +|=|..|+
T Consensus 23 ~~l~~~~~~Gv~~~v~~~~-~~~~~~~~~~l~~~~~-~i~~~~G~hP~~~~~~~~~~~~~l~~~~~~~~~--~~iGE~Gl 98 (264)
T 1xwy_A 23 DVVACAFDAGVNGLLITGT-NLRESQQAQKLARQYS-SCWSTAGVHPHDSSQWQAATEEAIIELAAQPEV--VAIGECGL 98 (264)
T ss_dssp HHHHHHHHTTCCEEEECCC-SHHHHHHHHHHHHHST-TEEEEECCCGGGGGGCCHHHHHHHHHHHTSTTE--EEEEEEEE
T ss_pred HHHHHHHHCCCCEEEEeCC-CHHHHHHHHHHHHhCC-CEEEEEEECCcccccCCHHHHHHHHHHhcCCCe--EEEEEecc
Confidence 3456788899999876644 5777777777665533 332222111 12345555555542222 33356665
Q ss_pred cCCh----HHHH-HHHHHHHHHHHHcCCcEEEEcC
Q psy6272 316 ATSV----EVTF-LAQKMIAARCNKQGKPFLVVGD 345 (547)
Q Consensus 316 e~~~----e~v~-~~qk~ii~~c~~~gKPvi~aTq 345 (547)
+... .+.. ..-+..++.|++.|+||++.|.
T Consensus 99 d~~~~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~~ 133 (264)
T 1xwy_A 99 DFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCR 133 (264)
T ss_dssp ETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHhCCcEEEEcC
Confidence 5532 1111 2234568889999999999753
No 290
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=51.31 E-value=82 Score=35.13 Aligned_cols=131 Identities=15% Similarity=0.051 Sum_probs=67.9
Q ss_pred CCChhhHHHH--------HHHHHcCCcEEEEc-------------ccCChhh------------HHHHHHHHH-hcCCCc
Q psy6272 236 VIADRDKHVV--------DLIVREAVDIIIMS-------------SVTGANS------------IREMRGMLE-DHVDRV 281 (547)
Q Consensus 236 ~lt~~D~~di--------~~~~~~g~d~I~~s-------------fV~sa~d------------i~~~r~~l~-~~~~~i 281 (547)
.||..|++.+ +.|.+.|+|+|=+- ..+...| +.++.+.+. ..+.+.
T Consensus 138 ~~t~~eI~~~i~~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGGs~enR~r~~~eiv~avr~~vg~~~ 217 (729)
T 1o94_A 138 EMDLSDIAQVQQFYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGGSLENRARFWLETLEKVKHAVGSDC 217 (729)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCCCHHHHhHHHHHHHHHHHHHhCCCc
Confidence 5777777665 46778999999873 3333222 222222222 235677
Q ss_pred eEEEEec------------CHHHHhhHHHHHhhcCEEEEcCCcc---cc-cCChHHHH-HHHHHHHHHHH-HcCCcEEEE
Q psy6272 282 LILAKIE------------TLLGMEYMDEIIMESDGVVLNRIQL---AV-ATSVEVTF-LAQKMIAARCN-KQGKPFLVV 343 (547)
Q Consensus 282 ~IiakIE------------t~~av~nldeIl~~~DgImIargDL---g~-e~~~e~v~-~~qk~ii~~c~-~~gKPvi~a 343 (547)
.|..||- ..++++-...+-+.+|.+=+.-|.+ .- ..+....+ ..+...++..+ ..++|||..
T Consensus 218 pv~vrls~~~~~~~~G~~~~~~~~~~~~~l~~~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~ 297 (729)
T 1o94_A 218 AIATRFGVDTVYGPGQIEAEVDGQKFVEMADSLVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGV 297 (729)
T ss_dssp EEEEEEEEECSSCTTSCCTTTHHHHHHHHHGGGCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECC
T ss_pred eEEEEEccccCcCCCCCCchHHHHHHHHHHHhhcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEEe
Confidence 8888882 1233332222222257776655532 11 01110000 00122233333 358999976
Q ss_pred cCCCCCCCcccccccCccchhhHHHHHHhC-ccEEeeC
Q psy6272 344 GDILPDHNVEEYSDVSIGDMNDVNSIVQDG-ADVVVLT 380 (547)
Q Consensus 344 Tq~Le~PtraE~~~~~~~~~~Dv~nav~~g-~D~vmLs 380 (547)
..+- + . .|+..++..| +|.|++.
T Consensus 298 G~i~---~---~--------~~a~~~l~~g~aD~V~~g 321 (729)
T 1o94_A 298 GRYT---D---P--------EKMIEIVTKGYADIIGCA 321 (729)
T ss_dssp SCCC---C---H--------HHHHHHHHTTSCSBEEES
T ss_pred CCCC---C---H--------HHHHHHHHCCCCCEEEeC
Confidence 5532 1 2 5556688888 9999997
No 291
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=51.28 E-value=1.3e+02 Score=30.29 Aligned_cols=117 Identities=14% Similarity=0.139 Sum_probs=62.7
Q ss_pred HHHHHHHcCCcEEEEcccCCh---------------hhHHHHHHHHHhcCCCceEEEEecC-----HHHHhhHHHHHhh-
Q psy6272 244 VVDLIVREAVDIIIMSSVTGA---------------NSIREMRGMLEDHVDRVLILAKIET-----LLGMEYMDEIIME- 302 (547)
Q Consensus 244 di~~~~~~g~d~I~~sfV~sa---------------~di~~~r~~l~~~~~~i~IiakIEt-----~~av~nldeIl~~- 302 (547)
+++.+++.|+|.|.+.+--|. +.+..+.++..+.|.. +..-+|. +.-.+.+-++++.
T Consensus 101 ~i~~a~~~g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (337)
T 3ble_A 101 TVDWIKDSGAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLK--INVYLEDWSNGFRNSPDYVKSLVEHL 178 (337)
T ss_dssp HHHHHHHHTCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCE--EEEEEETHHHHHHHCHHHHHHHHHHH
T ss_pred hHHHHHHCCCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCE--EEEEEEECCCCCcCCHHHHHHHHHHH
Confidence 799999999999988764443 2333334444555554 4455665 2223333344433
Q ss_pred ----cCEEEEcCCc-ccccCChHHHHHHHHHHHHHHHHc-CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccE
Q psy6272 303 ----SDGVVLNRIQ-LAVATSVEVTFLAQKMIAARCNKQ-GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADV 376 (547)
Q Consensus 303 ----~DgImIargD-Lg~e~~~e~v~~~qk~ii~~c~~~-gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~ 376 (547)
+|.|.++ | .|+-. +.++...-+.+. +.. +.|+.+.++ +-.=--+ .-...|+..|+|.
T Consensus 179 ~~~Ga~~i~l~--DT~G~~~-P~~v~~lv~~l~---~~~p~~~i~~H~H---nd~GlA~--------AN~laAv~aGa~~ 241 (337)
T 3ble_A 179 SKEHIERIFLP--DTLGVLS-PEETFQGVDSLI---QKYPDIHFEFHGH---NDYDLSV--------ANSLQAIRAGVKG 241 (337)
T ss_dssp HTSCCSEEEEE--CTTCCCC-HHHHHHHHHHHH---HHCTTSCEEEECB---CTTSCHH--------HHHHHHHHTTCSE
T ss_pred HHcCCCEEEEe--cCCCCcC-HHHHHHHHHHHH---HhcCCCeEEEEec---CCcchHH--------HHHHHHHHhCCCE
Confidence 4666664 3 33322 333433333332 234 688998876 2111111 3344678889887
Q ss_pred Eee
Q psy6272 377 VVL 379 (547)
Q Consensus 377 vmL 379 (547)
+=-
T Consensus 242 vd~ 244 (337)
T 3ble_A 242 LHA 244 (337)
T ss_dssp EEE
T ss_pred EEE
Confidence 754
No 292
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=51.10 E-value=49 Score=31.37 Aligned_cols=64 Identities=14% Similarity=0.100 Sum_probs=35.8
Q ss_pred HHHHHHhcCCCceEEEEecCHH-HHhhHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEc
Q psy6272 270 MRGMLEDHVDRVLILAKIETLL-GMEYMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVG 344 (547)
Q Consensus 270 ~r~~l~~~~~~i~IiakIEt~~-av~nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aT 344 (547)
+.+.+.+.|-++.++.- .+.+ -.+.++.++.. .|||++.+.|... ....+..++++|+||++..
T Consensus 24 i~~~a~~~g~~~~~~~~-~~~~~~~~~i~~l~~~~vdgiii~~~~~~~----------~~~~~~~~~~~~iPvV~~~ 89 (306)
T 8abp_A 24 ADKAGKDLGFEVIKIAV-PDGEKTLNAIDSLAASGAKGFVICTPDPKL----------GSAIVAKARGYDMKVIAVD 89 (306)
T ss_dssp HHHHHHHHTEEEEEEEC-CSHHHHHHHHHHHHHTTCCEEEEECSCGGG----------HHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHcCCEEEEeCC-CCHHHHHHHHHHHHHcCCCEEEEeCCCchh----------hHHHHHHHHHCCCcEEEeC
Confidence 34444444544433322 2222 23345555544 7999999766431 2234556788999999764
No 293
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=51.02 E-value=20 Score=30.23 Aligned_cols=41 Identities=24% Similarity=0.266 Sum_probs=32.1
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------chHHHHHHhcCCCCCEEEE
Q psy6272 426 IVIACVNAALKCQAVAIIVITCS---------GYSAKLVSKYRPQCPILAV 467 (547)
Q Consensus 426 ia~aav~~a~~~~a~aIvv~T~s---------G~tA~~isk~RP~~pIiav 467 (547)
.+...++.|.+.+++.||+-++. |.++..+.+.-| ||++.|
T Consensus 98 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 147 (147)
T 3hgm_A 98 PSRTIVRFARKRECDLVVIGAQGTNGDKSLLLGSVAQRVAGSAH-CPVLVV 147 (147)
T ss_dssp HHHHHHHHHHHTTCSEEEECSSCTTCCSCCCCCHHHHHHHHHCS-SCEEEC
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCccccceeeccHHHHHHhhCC-CCEEEC
Confidence 45566778888999998887753 778888888765 999874
No 294
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=50.92 E-value=21 Score=36.83 Aligned_cols=68 Identities=21% Similarity=0.235 Sum_probs=41.7
Q ss_pred HHHHHHHHHcCCcEEEEcccC------ChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh----cCEEEEcCC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVT------GANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME----SDGVVLNRI 311 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~------sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~----~DgImIarg 311 (547)
.++.+.+.+.|+|+|.+|.-- ....+..+.+.....+.++.||+- -|+.+-.++++. +|+|||||.
T Consensus 240 ~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~----GGI~~g~D~~kalalGAd~V~iGr~ 315 (368)
T 2nli_A 240 PEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFD----SGVRRGEHVAKALASGADVVALGRP 315 (368)
T ss_dssp HHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEEC----SSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEE----CCCCCHHHHHHHHHcCCCEEEECHH
Confidence 466789999999999997411 112333333333333346788873 344444444444 899999995
Q ss_pred cc
Q psy6272 312 QL 313 (547)
Q Consensus 312 DL 313 (547)
-|
T Consensus 316 ~l 317 (368)
T 2nli_A 316 VL 317 (368)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 295
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=50.81 E-value=64 Score=33.35 Aligned_cols=96 Identities=8% Similarity=0.086 Sum_probs=60.4
Q ss_pred HHHHHHHHHcCCcEEEEcc-------cCChhhHHHHHHHHHhcCCCceEEEEec---CHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMSS-------VTGANSIREMRGMLEDHVDRVLILAKIE---TLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sf-------V~sa~di~~~r~~l~~~~~~i~IiakIE---t~~av~nldeIl~~-~DgImIar 310 (547)
...+++.++.|+|+|++.= ....|-.+-++...+..+.++.||+.+= |.++++....-.+. +||+|+-+
T Consensus 83 ~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~~Gadavlvv~ 162 (360)
T 4dpp_A 83 DDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFAVGMHAALHIN 162 (360)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcC
Confidence 4456788999999998832 2223333444455565667899999764 55666655554444 69988876
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-...- .+.+.+...-+.|.+. .|+++-
T Consensus 163 PyY~k-~sq~gl~~hf~~IA~a-----~PiilY 189 (360)
T 4dpp_A 163 PYYGK-TSIEGLIAHFQSVLHM-----GPTIIY 189 (360)
T ss_dssp CCSSC-CCHHHHHHHHHTTGGG-----SCEEEE
T ss_pred CCCCC-CCHHHHHHHHHHHHHh-----CCEEEE
Confidence 54432 3456666666666542 598764
No 296
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=50.75 E-value=21 Score=34.62 Aligned_cols=145 Identities=12% Similarity=0.090 Sum_probs=87.0
Q ss_pred CCCChhhHHH-HHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHH-------HhhHHHHHhh-cCE
Q psy6272 235 PVIADRDKHV-VDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLG-------MEYMDEIIME-SDG 305 (547)
Q Consensus 235 p~lt~~D~~d-i~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~a-------v~nldeIl~~-~Dg 305 (547)
|..|..|... ++.+.++|++.|+++ +.-+..+++.|. + +++.+-|==|.| +.-.++ ++. +|.
T Consensus 12 p~~t~~~i~~l~~~A~~~~~~aVcv~----p~~v~~a~~~l~--g--v~v~tvigFP~G~~~~~~k~~E~~~-i~~GAdE 82 (226)
T 1vcv_A 12 PYLTVDEAVAGARKAEELGVAAYCVN----PIYAPVVRPLLR--K--VKLCVVADFPFGALPTASRIALVSR-LAEVADE 82 (226)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHGGGCS--S--SEEEEEESTTTCCSCHHHHHHHHHH-HTTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--C--CeEEEEeCCCCCCCchHHHHHHHHH-HHCCCCE
Confidence 5667788655 468999999999986 345666666663 2 676665532222 223334 333 554
Q ss_pred E--EEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEeeC--
Q psy6272 306 V--VLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVLT-- 380 (547)
Q Consensus 306 I--mIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmLs-- 380 (547)
| ++..|.| .+=.++.+..-.+.+.+.|...+.|||+.|-.| |..|+ ..++ -+...|+|.|=-|
T Consensus 83 ID~Vinig~~-~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~L---t~eei--------~~a~~ia~eaGADfVKTSTG 150 (226)
T 1vcv_A 83 IDVVAPIGLV-KSRRWAEVRRDLISVVGAAGGRVVKVITEEPYL---RDEER--------YTLYDIIAEAGAHFIKSSTG 150 (226)
T ss_dssp EEEECCHHHH-HTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC---CHHHH--------HHHHHHHHHHTCSEEECCCS
T ss_pred EEEecchhhh-cCCCHHHHHHHHHHHHHHHcCCCceEEEeccCC---CHHHH--------HHHHHHHHHcCCCEEEeCCC
Confidence 4 2222222 111234555556667777766677889888855 44555 3333 3556799999888
Q ss_pred Cc------------chHHHHHHHHHHHHHHhh
Q psy6272 381 QS------------EQAHHRVDILKEILKKTE 400 (547)
Q Consensus 381 k~------------Eta~eaV~~m~~I~~~aE 400 (547)
++ -...|.|+.|++.+++.-
T Consensus 151 f~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g 182 (226)
T 1vcv_A 151 FAEEAYAARQGNPVHSTPERAAAIARYIKEKG 182 (226)
T ss_dssp CCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHT
T ss_pred CCccccccccCCCCCCCHHHHHHHHHHHHHhC
Confidence 33 111289999998876543
No 297
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=50.67 E-value=1e+02 Score=31.36 Aligned_cols=98 Identities=11% Similarity=0.078 Sum_probs=62.7
Q ss_pred HHHHHH----hcC-CCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcC---CcE
Q psy6272 270 MRGMLE----DHV-DRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQG---KPF 340 (547)
Q Consensus 270 ~r~~l~----~~~-~~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~g---KPv 340 (547)
+++.|. ..| ..+.+++.+.+++.++.+ ... +|.|++..-|-.. ..+ .+.+. +..+...| +|+
T Consensus 28 lk~~l~~~~~~~g~~~ig~~l~i~~p~~~e~a---~~~GaD~vilDlEha~~--~~e---~~~~~-l~a~~~~~~~~~~~ 98 (339)
T 1izc_A 28 LRQALKDAMADPSKTLMGVAHGIPSTFVTKVL---AATKPDFVWIDVEHGMF--NRL---ELHDA-IHAAQHHSEGRSLV 98 (339)
T ss_dssp HHHHHHHHHHCGGGCEEEEEECSCCHHHHHHH---HHTCCSEEEEETTTSCC--CHH---HHHHH-HHHHHHHTTTCSEE
T ss_pred HHHHHHhhhccCCCeEEEEEEECCCHHHHHHH---HhCCCCEEEEECCCCCC--cHH---HHHHH-HHHhhhcCCCCCeE
Confidence 555555 123 346778888877766543 222 7999999887433 222 23333 45566566 888
Q ss_pred EEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHH
Q psy6272 341 LVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVD 390 (547)
Q Consensus 341 i~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~ 390 (547)
++=+. -.+- .|+..++..|+|+||+.|-+|+-++-+
T Consensus 99 ~VRv~------~~~~--------~di~~~LdaGa~gImlP~V~saee~~~ 134 (339)
T 1izc_A 99 IVRVP------KHDE--------VSLSTALDAGAAGIVIPHVETVEEVRE 134 (339)
T ss_dssp EEECC------TTCH--------HHHHHHHHHTCSEEEETTCCCHHHHHH
T ss_pred EEEeC------CCCH--------HHHHHHHhCCCCEEEeCCCCCHHHHHH
Confidence 88322 2223 678888888999999999888875443
No 298
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=50.63 E-value=52 Score=33.25 Aligned_cols=69 Identities=13% Similarity=0.063 Sum_probs=44.4
Q ss_pred HHHHHHHHHcCCcEEEEcccC-----Ch-h--------hHHHHHHHHHhcCCCceEEE--EecCHHHHhhHHHHHhhcCE
Q psy6272 242 KHVVDLIVREAVDIIIMSSVT-----GA-N--------SIREMRGMLEDHVDRVLILA--KIETLLGMEYMDEIIMESDG 305 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~-----sa-~--------di~~~r~~l~~~~~~i~Iia--kIEt~~av~nldeIl~~~Dg 305 (547)
.++.+.+.+.|+|+|.++.-- +. . .+..+.+..... ++.||+ -|-|.+-+... +..=+|+
T Consensus 160 ~e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~--~ipVIa~GGI~~g~Dv~ka--lalGAda 235 (336)
T 1ypf_A 160 PEAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAA--SKPIIADGGIRTNGDVAKS--IRFGATM 235 (336)
T ss_dssp HHHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTC--SSCEEEESCCCSTHHHHHH--HHTTCSE
T ss_pred HHHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHc--CCcEEEeCCCCCHHHHHHH--HHcCCCE
Confidence 467889999999999995321 00 0 344454444332 688898 66655444322 2223899
Q ss_pred EEEcCCccc
Q psy6272 306 VVLNRIQLA 314 (547)
Q Consensus 306 ImIargDLg 314 (547)
+|+||.=|+
T Consensus 236 V~iGr~~l~ 244 (336)
T 1ypf_A 236 VMIGSLFAG 244 (336)
T ss_dssp EEESGGGTT
T ss_pred EEeChhhhc
Confidence 999999984
No 299
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=50.62 E-value=29 Score=33.36 Aligned_cols=144 Identities=10% Similarity=0.086 Sum_probs=85.5
Q ss_pred CCCChhhHHH-HHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHH-------HHHhh-cCE
Q psy6272 235 PVIADRDKHV-VDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMD-------EIIME-SDG 305 (547)
Q Consensus 235 p~lt~~D~~d-i~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nld-------eIl~~-~Dg 305 (547)
|..|..|++. ++.+.++|++.|+++ +.-+..+++.+. +..+++.+-+=-+.|-.+.+ +-++. +|.
T Consensus 14 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v~~~~~~l~--~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~~GAde 87 (220)
T 1ub3_A 14 PTATLEEVAKAAEEALEYGFYGLCIP----PSYVAWVRARYP--HAPFRLVTVVGFPLGYQEKEVKALEAALACARGADE 87 (220)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEECC----GGGHHHHHHHCT--TCSSEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEC----HHHHHHHHHHhC--CCCceEEEEecCCCCCCchHHHHHHHHHHHHcCCCE
Confidence 5667777655 468889999999875 445777777664 44577777775555433332 22222 465
Q ss_pred EE--EcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEeeCCc
Q psy6272 306 VV--LNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVLTQS 382 (547)
Q Consensus 306 Im--IargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmLsk~ 382 (547)
|- |..|.|- +=..+.+..-.+.+.+.|...+.|||+-|-.| +..|+ ...+ -+...|+|.|=-|-|
T Consensus 88 vd~vinig~~~-~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l---~~e~i--------~~a~~ia~eaGADfVKTsTG 155 (220)
T 1ub3_A 88 VDMVLHLGRAK-AGDLDYLEAEVRAVREAVPQAVLKVILETGYF---SPEEI--------ARLAEAAIRGGADFLKTSTG 155 (220)
T ss_dssp EEEECCHHHHH-TTCHHHHHHHHHHHHHHSTTSEEEEECCGGGS---CHHHH--------HHHHHHHHHHTCSEEECCCS
T ss_pred EEecccchhhh-CCCHHHHHHHHHHHHHHHcCCCceEEEecCCC---CHHHH--------HHHHHHHHHhCCCEEEeCCC
Confidence 42 2333220 11234555555667777766677888877654 44455 3333 355679999977722
Q ss_pred ch----HHHHHHHHHHHH
Q psy6272 383 EQ----AHHRVDILKEIL 396 (547)
Q Consensus 383 Et----a~eaV~~m~~I~ 396 (547)
=+ ..+.|+.|.++.
T Consensus 156 f~~~gat~~dv~~m~~~v 173 (220)
T 1ub3_A 156 FGPRGASLEDVALLVRVA 173 (220)
T ss_dssp SSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHhh
Confidence 22 338888888663
No 300
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=50.23 E-value=23 Score=36.96 Aligned_cols=94 Identities=13% Similarity=0.122 Sum_probs=54.7
Q ss_pred HHHHHHHHHcCCcEEEEcccC------ChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh----cCEEEEcCC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVT------GANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME----SDGVVLNRI 311 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~------sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~----~DgImIarg 311 (547)
.++.+.+.+.|+|+|.+|.=- ....+..+.+..+..+.++.||+- -|+.+-.++++. +|+|+|||.
T Consensus 263 ~e~A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~~ipVia~----GGI~~g~Dv~kalalGAd~V~iGr~ 338 (392)
T 2nzl_A 263 GDDAREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEGKVEVFLD----GGVRKGTDVLKALALGAKAVFVGRP 338 (392)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTTSSEEEEC----SSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCCCCEEEEE----CCCCCHHHHHHHHHhCCCeeEECHH
Confidence 566889999999999996421 122344444433333456888872 445555555544 799999996
Q ss_pred ccccc-----CCh-HHHHHHHHHHHHHHHHcCCc
Q psy6272 312 QLAVA-----TSV-EVTFLAQKMIAARCNKQGKP 339 (547)
Q Consensus 312 DLg~e-----~~~-e~v~~~qk~ii~~c~~~gKP 339 (547)
-|-.. -+. +.+..+.+++-..+...|..
T Consensus 339 ~l~~~~~~g~~gv~~~l~~l~~el~~~m~~~G~~ 372 (392)
T 2nzl_A 339 IVWGLAFQGEKGVQDVLEILKEEFRLAMALSGCQ 372 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 65321 111 12334555555555556653
No 301
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=49.70 E-value=21 Score=38.12 Aligned_cols=119 Identities=11% Similarity=0.126 Sum_probs=69.4
Q ss_pred CCCCCCh-hhHHHHHHHHHcCCcEEEEcccC---ChhhHHHHHHHHHhcCCCceEEE--EecCHHHHhhHHHHHhhcCEE
Q psy6272 233 NLPVIAD-RDKHVVDLIVREAVDIIIMSSVT---GANSIREMRGMLEDHVDRVLILA--KIETLLGMEYMDEIIMESDGV 306 (547)
Q Consensus 233 ~lp~lt~-~D~~di~~~~~~g~d~I~~sfV~---sa~di~~~r~~l~~~~~~i~Iia--kIEt~~av~nldeIl~~~DgI 306 (547)
.+..|.| ++.+++++|++.|+|+|.+..-+ ..-|+....+++.....++.+|+ .|-|++-+..+-+ .+||+
T Consensus 157 gm~~LvEvh~~eE~~~A~~lga~iIGinnr~L~t~~~dl~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~~~---~a~av 233 (452)
T 1pii_A 157 EMGVLTEVSNEEEQERAIALGAKVVGINNRDLRDLSIDLNRTRELAPKLGHNVTVISESGINTYAQVRELSH---FANGF 233 (452)
T ss_dssp TCEEEEEECSHHHHHHHHHTTCSEEEEESEETTTTEECTHHHHHHHHHHCTTSEEEEESCCCCHHHHHHHTT---TCSEE
T ss_pred CCeEEEEeCCHHHHHHHHHCCCCEEEEeCCCCCCCCCCHHHHHHHHHhCCCCCeEEEECCCCCHHHHHHHHH---hCCEE
Confidence 3334444 57888999999999999986421 22345555555544445667776 4666665555533 38999
Q ss_pred EEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEee
Q psy6272 307 VLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVL 379 (547)
Q Consensus 307 mIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmL 379 (547)
+||-+=.. .++...+-++++ .|+--||.. | .. .|+..++..|+|.+=+
T Consensus 234 LVGealmr----~~d~~~~~~~l~-----~~~~KICGi------t--~~--------eda~~a~~~Gad~iGf 281 (452)
T 1pii_A 234 LIGSALMA----HDDLHAAVRRVL-----LGENKVCGL------T--RG--------QDAKAAYDAGAIYGGL 281 (452)
T ss_dssp EECHHHHT----CSCHHHHHHHHH-----HCSCEECCC------C--SH--------HHHHHHHHHTCSEEEE
T ss_pred EEcHHHcC----CcCHHHHHHHHH-----HHhccccCC------C--cH--------HHHHHHHhcCCCEEEe
Confidence 99943211 122333333333 233333311 1 13 7888889999998654
No 302
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=49.09 E-value=39 Score=32.42 Aligned_cols=50 Identities=20% Similarity=0.316 Sum_probs=36.9
Q ss_pred HHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHH
Q psy6272 244 VVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGM 293 (547)
Q Consensus 244 di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av 293 (547)
.++...+.|+|+|.+.-.-..+.++.+.+.+.+.+..+.+++..-++.+.
T Consensus 83 ~~~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g~~v~vLt~~s~~~~~ 132 (228)
T 3m47_A 83 ICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFLLTEMSHPGAE 132 (228)
T ss_dssp HHHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCEEEEECCCCSGGGG
T ss_pred HHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHH
Confidence 45667789999999976656667888888887767666666777666543
No 303
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=49.08 E-value=32 Score=28.85 Aligned_cols=41 Identities=29% Similarity=0.284 Sum_probs=32.6
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC---------chHHHHHHhcCCCCCEEEE
Q psy6272 426 IVIACVNAALKCQAVAIIVITCS---------GYSAKLVSKYRPQCPILAV 467 (547)
Q Consensus 426 ia~aav~~a~~~~a~aIvv~T~s---------G~tA~~isk~RP~~pIiav 467 (547)
.+...++.|.+.+++.||+-+.. |.++..+.+.- +|||+.+
T Consensus 87 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~-~~pVlvv 136 (137)
T 2z08_A 87 PAEAILQAARAEKADLIVMGTRGLGALGSLFLGSQSQRVVAEA-PCPVLLV 136 (137)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCTTCCSCSSSCHHHHHHHHHC-SSCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCchhhhhhhccHHHHHHhcC-CCCEEEe
Confidence 55666788889999999998763 67888888874 5999976
No 304
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=48.74 E-value=30 Score=34.00 Aligned_cols=89 Identities=10% Similarity=0.120 Sum_probs=50.5
Q ss_pred HHHHHHHHcCCcEEEEcc--------cCCh--------------h----hHHHHHHHHHhcCCCceEEE--EecCHHHHh
Q psy6272 243 HVVDLIVREAVDIIIMSS--------VTGA--------------N----SIREMRGMLEDHVDRVLILA--KIETLLGME 294 (547)
Q Consensus 243 ~di~~~~~~g~d~I~~sf--------V~sa--------------~----di~~~r~~l~~~~~~i~Iia--kIEt~~av~ 294 (547)
+.++.+.+.|+|+|.++- .++. . .+..++...+. -++.||+ -|-|.+-+
T Consensus 180 ~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~--~~ipvia~GGI~~~~d~- 256 (311)
T 1ep3_A 180 PIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQD--VDIPIIGMGGVANAQDV- 256 (311)
T ss_dssp HHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTT--CSSCEEECSSCCSHHHH-
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHh--cCCCEEEECCcCCHHHH-
Confidence 346778899999999952 2221 1 12333333222 2567776 45554433
Q ss_pred hHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCc
Q psy6272 295 YMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKP 339 (547)
Q Consensus 295 nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKP 339 (547)
.+.+.. +|+|++||+=|. +.+-+..+.+.+-......|.+
T Consensus 257 --~~~l~~GAd~V~vg~~~l~---~p~~~~~i~~~l~~~~~~~g~~ 297 (311)
T 1ep3_A 257 --LEMYMAGASAVAVGTANFA---DPFVCPKIIDKLPELMDQYRIE 297 (311)
T ss_dssp --HHHHHHTCSEEEECTHHHH---CTTHHHHHHHHHHHHHHHTTCS
T ss_pred --HHHHHcCCCEEEECHHHHc---CcHHHHHHHHHHHHHHHHcCCC
Confidence 333333 899999998776 4444555555555555555543
No 305
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=48.71 E-value=1.2e+02 Score=28.70 Aligned_cols=99 Identities=8% Similarity=0.026 Sum_probs=63.4
Q ss_pred HHHHHHHcCCcEEEEcccC----ChhhHHHHHHHHHhcCCCceEEEE------ec----------------CHHHHhhHH
Q psy6272 244 VVDLIVREAVDIIIMSSVT----GANSIREMRGMLEDHVDRVLILAK------IE----------------TLLGMEYMD 297 (547)
Q Consensus 244 di~~~~~~g~d~I~~sfV~----sa~di~~~r~~l~~~~~~i~Iiak------IE----------------t~~av~nld 297 (547)
.++.+.+.|+|+|-+..-. +.++++++++.+++.|-.+..+.- .- ..++++.+.
T Consensus 26 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 105 (290)
T 3tva_A 26 HLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGGFDGESYADIPTTARTVGLVPLETRASRVAEMK 105 (290)
T ss_dssp CHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECCCTTCCCSSHHHHHHHSSSCSTTTHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeeccCCcccccccccccccCCCCHHHHHHHHHHHH
Confidence 4788899999999988643 367799999999887755444421 00 123556666
Q ss_pred HHHhh-----cCEEEEcCCcccc--cCChHHHHHHHHHHHHHHHHcCCcEEE
Q psy6272 298 EIIME-----SDGVVLNRIQLAV--ATSVEVTFLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 298 eIl~~-----~DgImIargDLg~--e~~~e~v~~~qk~ii~~c~~~gKPvi~ 342 (547)
+.+.. ++.|.+..|...- +-.++.+...-+++...|+++|..+.+
T Consensus 106 ~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 157 (290)
T 3tva_A 106 EISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHL 157 (290)
T ss_dssp HHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 66655 3677765553221 112345555667777788888887666
No 306
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=48.57 E-value=47 Score=33.75 Aligned_cols=99 Identities=11% Similarity=0.113 Sum_probs=67.6
Q ss_pred hhhHHHHHHHHHcCCcEEEEcccCChhhHHHHHH----HHHhcCC-CceEEEEe---cCHHHHhhHH--------HHHhh
Q psy6272 239 DRDKHVVDLIVREAVDIIIMSSVTGANSIREMRG----MLEDHVD-RVLILAKI---ETLLGMEYMD--------EIIME 302 (547)
Q Consensus 239 ~~D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~----~l~~~~~-~i~IiakI---Et~~av~nld--------eIl~~ 302 (547)
+.|...++.=++.|||+++--++=+.+....+++ .+.+.|- ++.|++-| -|...++.+. ++++.
T Consensus 165 ~~d~~~Lk~KvdAGAdf~ITQ~ffD~e~~~~f~~~~~~~~r~~Gi~~vPIipGImPi~s~k~~~f~~~~G~~IP~~l~~~ 244 (315)
T 3ijd_A 165 TDEHLRIIDKINKGCKYFITQAVYNVEAAKDFLSDYYYYSKNNNLKMVPIIFTLTPCGSTKTLEFMKWLGISIPRWLEND 244 (315)
T ss_dssp SCHHHHHHHHHHTTCCEEEESCCCCHHHHHHHHHHHHHHHHHTTBCCCCEEEEECCCCSHHHHHHHHHHTCCCCHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEccccCCHHHHHHHHHHHHHHHHHCCCCCCcEEEEeeecCCHHHHHHHhcCCCCCCHHHHHH
Confidence 3578889999999999999999999999998884 4555676 78888865 4544443332 11111
Q ss_pred cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEE
Q psy6272 303 SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 303 ~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~ 342 (547)
-++ -.| ..+.|++-....-+++++.|+..|.|.++
T Consensus 245 l~~----~~d-~~~~Gi~~a~e~~~~L~~~~~g~~~p~G~ 279 (315)
T 3ijd_A 245 LMN----CED-ILNKSVSLSKSIFNELMEFCLEKGIPIGC 279 (315)
T ss_dssp HHT----TCC-CHHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred HHh----CCC-HHHHHHHHHHHHHHHHHHhcCcCCcCCCc
Confidence 000 022 23445555555567788899999999986
No 307
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=48.43 E-value=1.2e+02 Score=31.61 Aligned_cols=113 Identities=7% Similarity=0.162 Sum_probs=76.7
Q ss_pred hhHHHHHHHHHcCCcEEEEc--------------cc-----------------CChhhHHHHHHHHHhcCCCceEEEEec
Q psy6272 240 RDKHVVDLIVREAVDIIIMS--------------SV-----------------TGANSIREMRGMLEDHVDRVLILAKIE 288 (547)
Q Consensus 240 ~D~~di~~~~~~g~d~I~~s--------------fV-----------------~sa~di~~~r~~l~~~~~~i~IiakIE 288 (547)
.-++-++.|.+.|||.|=+- |- -+.++.+.++++..+. .+.+++-+=
T Consensus 45 ~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~--Gi~~~stpf 122 (385)
T 1vli_A 45 QAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREK--QVIFLSTVC 122 (385)
T ss_dssp HHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHT--TCEEECBCC
T ss_pred HHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHc--CCcEEEccC
Confidence 34666788888999988651 21 1335666666766654 467777666
Q ss_pred CHHHHhhHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH
Q psy6272 289 TLLGMEYMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN 367 (547)
Q Consensus 289 t~~av~nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~ 367 (547)
..++++-++ +. +|.+=||-+|+.- ++ +++.+-+.|||||+.|.| -|-+|+ ...+
T Consensus 123 D~~svd~l~---~~~vd~~KIgS~~~~N------~p-----LL~~va~~gKPViLStGm---aTl~Ei--------~~Av 177 (385)
T 1vli_A 123 DEGSADLLQ---STSPSAFKIASYEINH------LP-----LLKYVARLNRPMIFSTAG---AEISDV--------HEAW 177 (385)
T ss_dssp SHHHHHHHH---TTCCSCEEECGGGTTC------HH-----HHHHHHTTCSCEEEECTT---CCHHHH--------HHHH
T ss_pred CHHHHHHHH---hcCCCEEEECcccccC------HH-----HHHHHHhcCCeEEEECCC---CCHHHH--------HHHH
Confidence 666665543 44 6999999888873 33 344566789999999996 377788 7778
Q ss_pred HHHHh-Cc-cEEee
Q psy6272 368 SIVQD-GA-DVVVL 379 (547)
Q Consensus 368 nav~~-g~-D~vmL 379 (547)
+++.. |. +.++|
T Consensus 178 e~i~~~Gn~~iiLl 191 (385)
T 1vli_A 178 RTIRAEGNNQIAIM 191 (385)
T ss_dssp HHHHTTTCCCEEEE
T ss_pred HHHHHCCCCcEEEE
Confidence 77764 55 55665
No 308
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=48.40 E-value=98 Score=30.65 Aligned_cols=107 Identities=9% Similarity=0.041 Sum_probs=71.9
Q ss_pred hHHHHH-HHHHcCCcEEEE-----cccCChhhHHHHHHHHHhcCCCceEEEE---ecCHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 241 DKHVVD-LIVREAVDIIIM-----SSVTGANSIREMRGMLEDHVDRVLILAK---IETLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 241 D~~di~-~~~~~g~d~I~~-----sfV~sa~di~~~r~~l~~~~~~i~Iiak---IEt~~av~nldeIl~~-~DgImIar 310 (547)
|...+. ...+.||++|-+ -|=.+.++++.+|+.. ++.|+.| +... .+++.... +|+|.+.-
T Consensus 80 dp~~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v-----~lPVl~Kdfi~d~~----qi~ea~~~GAD~VlLi~ 150 (272)
T 3tsm_A 80 DPPALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQAC-----SLPALRKDFLFDPY----QVYEARSWGADCILIIM 150 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTS-----SSCEEEESCCCSTH----HHHHHHHTTCSEEEEET
T ss_pred CHHHHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhc-----CCCEEECCccCCHH----HHHHHHHcCCCEEEEcc
Confidence 444443 455688999987 2457888999888643 5777766 1111 34554444 79999987
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.+|. . .--+.++..|+..|.-+++-++ +. .++-.|...|+|.+-.+
T Consensus 151 a~L~----~----~~l~~l~~~a~~lGl~~lvevh-----~~-----------eEl~~A~~~ga~iIGin 196 (272)
T 3tsm_A 151 ASVD----D----DLAKELEDTAFALGMDALIEVH-----DE-----------AEMERALKLSSRLLGVN 196 (272)
T ss_dssp TTSC----H----HHHHHHHHHHHHTTCEEEEEEC-----SH-----------HHHHHHTTSCCSEEEEE
T ss_pred cccC----H----HHHHHHHHHHHHcCCeEEEEeC-----CH-----------HHHHHHHhcCCCEEEEC
Confidence 7773 2 2234577889999998887432 22 55567888999988877
No 309
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=48.38 E-value=1.7e+02 Score=27.16 Aligned_cols=100 Identities=11% Similarity=0.081 Sum_probs=61.2
Q ss_pred HHHHHHHHHcCCcEEEEcccC------ChhhHHHHHHHHHhcCCCceEEEE---ec--CHHHHhhHHHHHhh-----cCE
Q psy6272 242 KHVVDLIVREAVDIIIMSSVT------GANSIREMRGMLEDHVDRVLILAK---IE--TLLGMEYMDEIIME-----SDG 305 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~------sa~di~~~r~~l~~~~~~i~Iiak---IE--t~~av~nldeIl~~-----~Dg 305 (547)
.+.++.+.+.|+|+|-+..-. +..++.++++.+.+.|-.+.-+.- +. ..+..+.+.+.+.. ++.
T Consensus 22 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~ 101 (272)
T 2q02_A 22 EAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARA 101 (272)
T ss_dssp HHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCE
Confidence 455788999999999887421 457899999999887655432221 11 12233444444444 356
Q ss_pred EEEcCCcccccCChHHH-HHHHHHHHHHHHHcCCcEEE
Q psy6272 306 VVLNRIQLAVATSVEVT-FLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 306 ImIargDLg~e~~~e~v-~~~qk~ii~~c~~~gKPvi~ 342 (547)
|.+.+|.-+- -.++.+ ...-+++...|+++|..+.+
T Consensus 102 v~~~~g~~~~-~~~~~~~~~~l~~l~~~a~~~gv~l~~ 138 (272)
T 2q02_A 102 LVLCPLNDGT-IVPPEVTVEAIKRLSDLFARYDIQGLV 138 (272)
T ss_dssp EEECCCCSSB-CCCHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred EEEccCCCch-hHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 6665554322 234555 66666777777777876665
No 310
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=48.23 E-value=49 Score=32.84 Aligned_cols=119 Identities=10% Similarity=0.106 Sum_probs=68.1
Q ss_pred HHHHHHHHcCCcEE-EEc-------------ccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEE
Q psy6272 243 HVVDLIVREAVDII-IMS-------------SVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVV 307 (547)
Q Consensus 243 ~di~~~~~~g~d~I-~~s-------------fV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgIm 307 (547)
+.++.+.+.|+|+| .+- ..++++.++++++. -++.++.|+=.-. .+..+...+. +|+|.
T Consensus 32 ~~a~~~~~~Ga~~I~~l~p~~~~~~~~~G~~~~~~~~~i~~I~~~-----~~iPv~~k~r~g~-~~~~~~~~a~GAd~V~ 105 (305)
T 2nv1_A 32 EQAKIAEEAGAVAVMALERVPADIRAAGGVARMADPTIVEEVMNA-----VSIPVMAKARIGH-IVEARVLEAMGVDYID 105 (305)
T ss_dssp HHHHHHHHTTCSEEEECCC-------CCCCCCCCCHHHHHHHHHH-----CSSCEEEEECTTC-HHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHcCCCEEEEcCCCcchhhhccCcccCCCHHHHHHHHHh-----CCCCEEecccccc-hHHHHHHHHCCCCEEE
Confidence 45677888999999 442 22245555555432 2567777764310 2223333333 79996
Q ss_pred EcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchH--
Q psy6272 308 LNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQA-- 385 (547)
Q Consensus 308 IargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta-- 385 (547)
+..++.. +++ ++.+. |++.|.|+++.+. .. .++..++..|+|.+.++ |++-
T Consensus 106 -~~~~l~~----~~~----~~~i~-~~~~g~~v~~~~~--------~~--------~e~~~a~~~Gad~V~~~-G~~g~g 158 (305)
T 2nv1_A 106 -ESEVLTP----ADE----EFHLN-KNEYTVPFVCGCR--------DL--------GEATRRIAEGASMLRTK-GEPGTG 158 (305)
T ss_dssp -ECTTSCC----SCS----SCCCC-GGGCSSCEEEEES--------SH--------HHHHHHHHTTCSEEEEC-CCTTSC
T ss_pred -EeccCCH----HHH----HHHHH-HhccCCcEEEEeC--------CH--------HHHHHHHHCCCCEEEec-cccCcc
Confidence 4444432 111 11233 5568999987543 22 55667778999999997 7542
Q ss_pred --HHHHHHHHH
Q psy6272 386 --HHRVDILKE 394 (547)
Q Consensus 386 --~eaV~~m~~ 394 (547)
.+++...+.
T Consensus 159 ~~~~~~~h~rt 169 (305)
T 2nv1_A 159 NIVEAVRHMRK 169 (305)
T ss_dssp CTHHHHHHHHH
T ss_pred chHHHHhhhhh
Confidence 255555444
No 311
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=48.23 E-value=1.5e+02 Score=30.39 Aligned_cols=33 Identities=21% Similarity=0.207 Sum_probs=26.2
Q ss_pred CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcch
Q psy6272 337 GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQ 384 (547)
Q Consensus 337 gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Et 384 (547)
.+|+|....+- -- .|+..++..|+|+|++. ...
T Consensus 280 ~ipvia~GGI~------~~--------~D~~k~l~~GAdaV~iG-r~~ 312 (370)
T 1gox_A 280 RIPVFLDGGVR------RG--------TDVFKALALGAAGVFIG-RPV 312 (370)
T ss_dssp SSCEEEESSCC------SH--------HHHHHHHHHTCSEEEEC-HHH
T ss_pred CCEEEEECCCC------CH--------HHHHHHHHcCCCEEeec-HHH
Confidence 68999877643 23 79999999999999998 543
No 312
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=47.85 E-value=71 Score=31.76 Aligned_cols=86 Identities=14% Similarity=0.091 Sum_probs=53.6
Q ss_pred cCEEEEcCCc--ccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEee
Q psy6272 303 SDGVVLNRIQ--LAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVL 379 (547)
Q Consensus 303 ~DgImIargD--Lg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmL 379 (547)
+|||++. |- =+..+..++-..+.+..++.++.+..||+..+. ..+-.|. -+.+ .|-..|+|++|+
T Consensus 42 v~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg---~~~t~~a--------i~la~~a~~~Gadavlv 109 (301)
T 3m5v_A 42 IDAVVPV-GTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAG---SNATHEA--------VGLAKFAKEHGADGILS 109 (301)
T ss_dssp CCEEECS-STTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECC---CSSHHHH--------HHHHHHHHHTTCSEEEE
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCC---CCCHHHH--------HHHHHHHHHcCCCEEEE
Confidence 6999885 32 223344455445555555555433589999876 4444555 3333 455679999999
Q ss_pred CCcch-----HHHHHHHHHHHHHHhhh
Q psy6272 380 TQSEQ-----AHHRVDILKEILKKTES 401 (547)
Q Consensus 380 sk~Et-----a~eaV~~m~~I~~~aE~ 401 (547)
. .+. --+.++....|+..+.-
T Consensus 110 ~-~P~y~~~s~~~l~~~f~~va~a~~l 135 (301)
T 3m5v_A 110 V-APYYNKPTQQGLYEHYKAIAQSVDI 135 (301)
T ss_dssp E-CCCSSCCCHHHHHHHHHHHHHHCSS
T ss_pred c-CCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 6 443 23788888888877753
No 313
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=47.61 E-value=1.6e+02 Score=29.14 Aligned_cols=116 Identities=17% Similarity=0.132 Sum_probs=71.0
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHhhhhhhhHHH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQV 408 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~aE~~~~~~~~ 408 (547)
+...|++.|.++.+. .|..... ..+...-..|++.+... +.. .++.+...++..+-... +-
T Consensus 89 lA~~a~~~G~~~~iv-----~p~~~~~--------~k~~~~~~~GA~V~~~~-~~~-~~~~~~a~~l~~~~~~~-~i--- 149 (323)
T 1v71_A 89 IALSAKILGIPAKII-----MPLDAPE--------AKVAATKGYGGQVIMYD-RYK-DDREKMAKEISEREGLT-II--- 149 (323)
T ss_dssp HHHHHHHTTCCEEEE-----EETTCCH--------HHHHHHHHTTCEEEEEC-TTT-TCHHHHHHHHHHHHTCB-CC---
T ss_pred HHHHHHHcCCCEEEE-----CCCCCcH--------HHHHHHHHcCCEEEEEC-CCH-HHHHHHHHHHHHhcCCE-ec---
Confidence 567799999998875 3333222 44555667799998876 432 24444444443332111 10
Q ss_pred HHHhhhcCCCCCCh--hhHHHHHHHHHHHhc-CCcEEEEEcCCchHHHHHHh----cCCCCCEEEEeCch
Q psy6272 409 FEDLCALACPPLDP--AHSIVIACVNAALKC-QAVAIIVITCSGYSAKLVSK----YRPQCPILAVSSLG 471 (547)
Q Consensus 409 f~~~~~~~~~~~~~--~~~ia~aav~~a~~~-~a~aIvv~T~sG~tA~~isk----~RP~~pIiavt~~~ 471 (547)
++..++ ...-...+.|+..++ ..++||+.+-+|.|+--+++ ++|.+.|++|.+..
T Consensus 150 --------~~~~n~~~~~g~~t~~~Ei~~q~~~~d~vv~~vG~GGt~~Gi~~~~k~~~~~~~vigve~~~ 211 (323)
T 1v71_A 150 --------PPYDHPHVLAGQGTAAKELFEEVGPLDALFVCLGGGGLLSGSALAARHFAPNCEVYGVEPEA 211 (323)
T ss_dssp --------CSSSSHHHHHHHTHHHHHHHHHHCCCSEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEEGG
T ss_pred --------CCCCCcchhhhHhHHHHHHHHhcCCCCEEEEecCCcHHHHHHHHHHHHcCCCCEEEEEEeCC
Confidence 011111 112233456666665 47999999999999876665 47999999999864
No 314
>3tnj_A Universal stress protein (USP); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, chaperone; HET: AMP; 2.00A {Nitrosomonas europaea} PDB: 2pfs_A*
Probab=47.39 E-value=28 Score=29.61 Aligned_cols=44 Identities=25% Similarity=0.234 Sum_probs=32.9
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC--------chHHHHHHhcCCCCCEEEEeCc
Q psy6272 426 IVIACVNAALKCQAVAIIVITCS--------GYSAKLVSKYRPQCPILAVSSL 470 (547)
Q Consensus 426 ia~aav~~a~~~~a~aIvv~T~s--------G~tA~~isk~RP~~pIiavt~~ 470 (547)
.+.+.++.|.+.+++.||+-++. |.++..+.+.=| |||+.+-+.
T Consensus 97 ~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvv~~~ 148 (150)
T 3tnj_A 97 PREEIIRIAEQENVDLIVVGSHGRHGLALLLGSTANSVLHYAK-CDVLAVRLR 148 (150)
T ss_dssp HHHHHHHHHHHTTCSEEEEEEC--------CCCHHHHHHHHCS-SEEEEEECC
T ss_pred HHHHHHHHHHHcCCCEEEEecCCCCCcCeEecchHHHHHHhCC-CCEEEEeCC
Confidence 45566778888999998888752 566777777654 999998664
No 315
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=47.36 E-value=1.4e+02 Score=26.79 Aligned_cols=116 Identities=13% Similarity=0.188 Sum_probs=66.2
Q ss_pred HHHHHHHHHcCCcEEEEcc--cCChhhHHHHHHHHHhcCCCceEEEEecC-------------------HHHHhhHHHHH
Q psy6272 242 KHVVDLIVREAVDIIIMSS--VTGANSIREMRGMLEDHVDRVLILAKIET-------------------LLGMEYMDEII 300 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sf--V~sa~di~~~r~~l~~~~~~i~IiakIEt-------------------~~av~nldeIl 300 (547)
.+++..+++.|++.++..- ++..+-+..++..++. +. ++..++. ....+-+..+.
T Consensus 65 ~~~~~~~~~~Ga~~~l~kp~~~~~~~l~~~i~~~~~~---~~-~~~~~d~~~~~~~~~v~~~~g~~~~~~~~~~~i~~~~ 140 (237)
T 3cwo_X 65 QAMVIEAIKAGAKDFIVNTAAVENPSLITQIAQTFGS---QA-VVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVE 140 (237)
T ss_dssp HHHHHHHHHTTCCEEEESHHHHHCTHHHHHHHHHHTG---GG-EEEEEEEEESSSCEEEEETTTTEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHCCHHheEeCCcccChHHHHHHHHHHhCC---Cc-eEEEeeecccCCcEEEEEeCCccccccCHHHHHHHHh
Confidence 6678899999999988764 5666666777766642 11 1111111 12233344444
Q ss_pred hh-cC-EEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEe
Q psy6272 301 ME-SD-GVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVV 378 (547)
Q Consensus 301 ~~-~D-gImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vm 378 (547)
.. +. .++.+.+.-|.--|+. . +.|-+.+...++|++..+-. +.. .|+..+...|+|+++
T Consensus 141 ~~~~~~vli~~~~~~g~~~g~~-~----~~i~~~~~~~~~Pvia~~g~------~~~--------~~~~~~~~~G~~~~~ 201 (237)
T 3cwo_X 141 KRGAGEILLTSIDRDGTKSGYD-T----EMIRFVRPLTTLPIIASGGA------GKM--------EHFLEAFLAGADAAL 201 (237)
T ss_dssp HHTCSEEEEEETTTTTCCSCCC-H----HHHHHHGGGCCSCEEEESCC------CSH--------HHHHHHHHHTCSEEE
T ss_pred hcCCCeEEEEecCCCCcccccc-H----HHHHHHHHhcCCCEEecCCC------CCH--------HHHHHHHHcCcHHHh
Confidence 44 23 3444544434333333 1 11223345568999987652 123 677777788999999
Q ss_pred eC
Q psy6272 379 LT 380 (547)
Q Consensus 379 Ls 380 (547)
..
T Consensus 202 vg 203 (237)
T 3cwo_X 202 AA 203 (237)
T ss_dssp ES
T ss_pred hh
Confidence 87
No 316
>2jpp_A Translational repressor; RNA recognition, protein/RNA, CSRA, RSMA, shine-dalgarno; NMR {Pseudomonas fluorescens}
Probab=47.24 E-value=28 Score=27.92 Aligned_cols=29 Identities=10% Similarity=0.224 Sum_probs=25.2
Q ss_pred cCCCCEEEEeceeEEEEEEEeCCeEEEEE
Q psy6272 185 VIPDDIVYIDRNIKLKVVEKENNDVHCTV 213 (547)
Q Consensus 185 v~~Gd~I~idD~I~l~V~~v~~~~v~~~V 213 (547)
-++|+.|.|+|.|..+|.++.++.|..=+
T Consensus 6 Rk~GEsI~IGd~I~ItVl~v~g~~VrLGI 34 (70)
T 2jpp_A 6 RKVGESINIGDDITITILGVSGQQVRIGI 34 (70)
T ss_dssp EETTCEEEETTTEEEEEEEEETTEEEEEE
T ss_pred ccCCCeEEECCCEEEEEEEEeCCEEEEEE
Confidence 47899999999999999999999887644
No 317
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=46.96 E-value=71 Score=31.53 Aligned_cols=150 Identities=16% Similarity=0.176 Sum_probs=88.3
Q ss_pred CCCChhhHHHH-HHHHHc--CCcEEEEcccCChhhHHHHHHHHHhcCC-CceEEEEecCHHHHhhHHHH--------Hhh
Q psy6272 235 PVIADRDKHVV-DLIVRE--AVDIIIMSSVTGANSIREMRGMLEDHVD-RVLILAKIETLLGMEYMDEI--------IME 302 (547)
Q Consensus 235 p~lt~~D~~di-~~~~~~--g~d~I~~sfV~sa~di~~~r~~l~~~~~-~i~IiakIEt~~av~nldeI--------l~~ 302 (547)
|..|..|...+ +.+.++ |++.|+++ +.-+..+++.|...+. .++|.+-|==|.|-.+.+.. -.=
T Consensus 23 p~~t~~~i~~lc~eA~~~~~~~~aVcV~----p~~v~~a~~~L~~~g~~~v~v~tVigFP~G~~~~~~Kv~E~~~Av~~G 98 (260)
T 1p1x_A 23 DDDTDEKVIALCHQAKTPVGNTAAICIY----PRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIDIALAETRAAIAYG 98 (260)
T ss_dssp TTCCHHHHHHHHHHTEETTEECSEEECC----GGGHHHHHHHHHHTTCTTSEEEEEESTTTCCSCHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHhccCCceEEEEC----HHHHHHHHHHhhhcCCCCceEEEEeCCCCCCCcHHHHHHHHHHHHHcC
Confidence 55567775553 566667 78888764 5578888888864344 67777766333332222211 112
Q ss_pred cCEE--EEcCCcccccCChHHHHHHHHHHHHHHHHcCCcE--EEEcCCCCCCCccc-ccccCccchhhHHHHHHhCccEE
Q psy6272 303 SDGV--VLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPF--LVVGDILPDHNVEE-YSDVSIGDMNDVNSIVQDGADVV 377 (547)
Q Consensus 303 ~DgI--mIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPv--i~aTq~Le~PtraE-~~~~~~~~~~Dv~nav~~g~D~v 377 (547)
+|.| +|..|.| .+=.++.+..-.+.+.+.|..+|+|+ |+.|-.| +..| +.. ...+ ++..|+|.|
T Consensus 99 AdEIDmVinig~l-~~g~~~~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---~d~e~i~~-----a~~i--a~eaGADfV 167 (260)
T 1p1x_A 99 ADEVDVVFPYRAL-MAGNEQVGFDLVKACKEACAAANVLLKVIIETGEL---KDEALIRK-----ASEI--SIKAGADFI 167 (260)
T ss_dssp CSEEEEECCHHHH-HTTCCHHHHHHHHHHHHHHHHTTCEEEEECCHHHH---CSHHHHHH-----HHHH--HHHTTCSEE
T ss_pred CCEEEEeccHHhh-hCCCHHHHHHHHHHHHHHhcccCCeEEEEEecccC---CcHHHHHH-----HHHH--HHHhCCCEE
Confidence 4544 2223322 11123566666777888898878885 6666544 4444 200 1333 566799999
Q ss_pred eeCCcch----HHHHHHHHHHHHHHh
Q psy6272 378 VLTQSEQ----AHHRVDILKEILKKT 399 (547)
Q Consensus 378 mLsk~Et----a~eaV~~m~~I~~~a 399 (547)
=-|-|=+ ..|.|+.|.+.+++.
T Consensus 168 KTSTGf~~~gAt~e~v~lm~~~I~~~ 193 (260)
T 1p1x_A 168 KTSTGKVAVNATPESARIMMEVIRDM 193 (260)
T ss_dssp ECCCSCSSCCCCHHHHHHHHHHHHHH
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 8882222 349999999887754
No 318
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=46.73 E-value=86 Score=31.50 Aligned_cols=163 Identities=10% Similarity=0.051 Sum_probs=85.1
Q ss_pred ceEEEEecCHHH-------HhhHHHHHhh-----cCEEEEc---CCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcC
Q psy6272 281 VLILAKIETLLG-------MEYMDEIIME-----SDGVVLN---RIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGD 345 (547)
Q Consensus 281 i~IiakIEt~~a-------v~nldeIl~~-----~DgImIa---rgDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq 345 (547)
..|+.|.|+... .+-+.-++.. .++|+-+ -|..+. .+...|++.|.|+.+..
T Consensus 47 ~~v~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~G~~~vv~~s~tsGN~g~------------alA~aa~~~G~~~~iv~- 113 (342)
T 4d9b_A 47 REIYIKRDDVTPIAMGGNKLRKLEFLVADALREGADTLITAGAIQSNHVR------------QTAAVAAKLGLHCVALL- 113 (342)
T ss_dssp SCEEEEEGGGCSSTTCCTHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHH------------HHHHHHHHHTCEEEEEE-
T ss_pred CEEEEEeCCCCCCCCcchHHHhHHHHHHHHHHcCCCEEEEcCCcccHHHH------------HHHHHHHHhCCcEEEEE-
Confidence 478899998754 1222222222 2456544 244442 25567999999988752
Q ss_pred CCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcch-HHHHHH-HHHHHHHHhhhhhhhHHHHHHhhhcCCCCCChh
Q psy6272 346 ILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQ-AHHRVD-ILKEILKKTESVLWEKQVFEDLCALACPPLDPA 423 (547)
Q Consensus 346 ~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Et-a~eaV~-~m~~I~~~aE~~~~~~~~f~~~~~~~~~~~~~~ 423 (547)
|..+...+.......-+...-..|++.++.. +.. ..++++ ...++..+-...+++. +. ..++.
T Consensus 114 ----p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~-~~~~~~~~~~~~a~~l~~~~~~~~~~p--~~--------~~n~~ 178 (342)
T 4d9b_A 114 ----ENPIGTTAENYLTNGNRLLLDLFNTQIEMCD-ALTDPDAQLQTLATRIEAQGFRPYVIP--VG--------GSSAL 178 (342)
T ss_dssp ----ECTTCCCCHHHHHSHHHHHHHHTTCEEEECS-CCSSHHHHHHHHHHHHHHTTCCEEECC--GG--------GCSHH
T ss_pred ----eCCCCCccccccccchHHHHHHCCCEEEEEC-chhhHHHHHHHHHHHHHhcCCceEEeC--CC--------CCChH
Confidence 3221100000000012344556899999887 432 224432 2222221111111110 00 01111
Q ss_pred --hHHHHHHHHHHHhc----CCcEEEEEcCCchHHHHHHh----cCCCCCEEEEeCch
Q psy6272 424 --HSIVIACVNAALKC----QAVAIIVITCSGYSAKLVSK----YRPQCPILAVSSLG 471 (547)
Q Consensus 424 --~~ia~aav~~a~~~----~a~aIvv~T~sG~tA~~isk----~RP~~pIiavt~~~ 471 (547)
.-....+.|+..++ ..++||+.+-+|.|+--+++ +.|.+.|++|.+..
T Consensus 179 ~~~G~~t~~~EI~~q~~~~~~~d~vv~~vGtGGt~aGi~~~~k~~~~~~~vigVe~~~ 236 (342)
T 4d9b_A 179 GAMGYVESALEIAQQCEEVVGLSSVVVASGSAGTHAGLAVGLEHLMPDVELIGVTVSR 236 (342)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCCEEEEEESSSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred HHHHHHHHHHHHHHHHhccCCCCEEEEeCCCCHHHHHHHHHHHhhCCCCeEEEEEecC
Confidence 12233456666665 47999999999988776654 47999999999864
No 319
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=46.54 E-value=83 Score=30.22 Aligned_cols=107 Identities=9% Similarity=0.082 Sum_probs=65.5
Q ss_pred HHHHHHHHcCCcEEEE-----cccCC----hhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCc
Q psy6272 243 HVVDLIVREAVDIIIM-----SSVTG----ANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQ 312 (547)
Q Consensus 243 ~di~~~~~~g~d~I~~-----sfV~s----a~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIargD 312 (547)
+.++.+ +.|+|++.+ .||-+ ..-++.+|++. +..+-+--||++++. -++...++ +|+|.+--
T Consensus 17 ~~i~~~-~~gad~lHvDvmDG~fvpn~t~G~~~v~~lr~~~---~~~~dvhLmv~dp~~--~i~~~~~aGAd~itvh~-- 88 (231)
T 3ctl_A 17 EQIEFI-DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLA---TKPLDCHLMVTRPQD--YIAQLARAGADFITLHP-- 88 (231)
T ss_dssp HHHHHH-HTTCSCEEEEEECSSSSSCCCBCHHHHHHHHTTC---CSCEEEEEESSCGGG--THHHHHHHTCSEEEECG--
T ss_pred HHHHHH-HcCCCEEEEEEEeCccCccchhcHHHHHHHHhcc---CCcEEEEEEecCHHH--HHHHHHHcCCCEEEECc--
Confidence 445666 889887643 23333 34555555432 334566778888754 46667766 79998762
Q ss_pred ccccC-ChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEee
Q psy6272 313 LAVAT-SVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVL 379 (547)
Q Consensus 313 Lg~e~-~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmL 379 (547)
|. + .. -.+.++.++++|+-++++.. -.|..|. ...+++++|.+++
T Consensus 89 ---Ea~~----~~-~~~~i~~i~~~G~k~gv~ln---p~tp~~~-----------~~~~l~~~D~Vlv 134 (231)
T 3ctl_A 89 ---ETIN----GQ-AFRLIDEIRRHDMKVGLILN---PETPVEA-----------MKYYIHKADKITV 134 (231)
T ss_dssp ---GGCT----TT-HHHHHHHHHHTTCEEEEEEC---TTCCGGG-----------GTTTGGGCSEEEE
T ss_pred ---ccCC----cc-HHHHHHHHHHcCCeEEEEEE---CCCcHHH-----------HHHHHhcCCEEEE
Confidence 22 1 11 24688899999999999753 2233333 2335578998864
No 320
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=46.27 E-value=52 Score=31.11 Aligned_cols=87 Identities=13% Similarity=0.061 Sum_probs=55.0
Q ss_pred HHHHHHHHHcCCcEEEEcccCC-----hhhHHHHHHHHHhcCCCceEEE--EecCHHHHhhHHHHHhh-cCEEEEcCCcc
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTG-----ANSIREMRGMLEDHVDRVLILA--KIETLLGMEYMDEIIME-SDGVVLNRIQL 313 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~s-----a~di~~~r~~l~~~~~~i~Iia--kIEt~~av~nldeIl~~-~DgImIargDL 313 (547)
.+.++.+.+.|++.|++.-+.. .-+...++++.... ++.++| -|-++ +++.++.+. +||+++|++=+
T Consensus 155 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~i~~l~~~~--~ipvia~GGI~~~---~d~~~~~~~Gadgv~vgsal~ 229 (252)
T 1ka9_F 155 VEWAVKGVELGAGEILLTSMDRDGTKEGYDLRLTRMVAEAV--GVPVIASGGAGRM---EHFLEAFQAGAEAALAASVFH 229 (252)
T ss_dssp HHHHHHHHHHTCCEEEEEETTTTTTCSCCCHHHHHHHHHHC--SSCEEEESCCCSH---HHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHHHcCCCEEEEecccCCCCcCCCCHHHHHHHHHHc--CCCEEEeCCCCCH---HHHHHHHHCCCHHHHHHHHHH
Confidence 4557788889999888753221 12355555544432 567776 34443 566666665 89999999877
Q ss_pred cccCChHHHHHHHHHHHHHHHHcCCcE
Q psy6272 314 AVATSVEVTFLAQKMIAARCNKQGKPF 340 (547)
Q Consensus 314 g~e~~~e~v~~~qk~ii~~c~~~gKPv 340 (547)
.....+++. .+.++..|.||
T Consensus 230 ~~~~~~~~~-------~~~l~~~~~~~ 249 (252)
T 1ka9_F 230 FGEIPIPKL-------KRYLAEKGVHV 249 (252)
T ss_dssp TTSSCHHHH-------HHHHHHTTCCB
T ss_pred cCCCCHHHH-------HHHHHHCCCCc
Confidence 766555443 33467778875
No 321
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=46.19 E-value=63 Score=33.30 Aligned_cols=122 Identities=12% Similarity=0.080 Sum_probs=70.8
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHhhhhhhhHH
Q psy6272 328 MIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQ 407 (547)
Q Consensus 328 ~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~aE~~~~~~~ 407 (547)
.+...|+..|.++++. .|..+.. .-+...-..|++.+... + +-.++++...+++++-.. ++-.+
T Consensus 126 a~A~aa~~~G~~~~iv-----~p~~~~~--------~k~~~~~~~GA~Vv~v~-~-~~~~a~~~a~~~~~~~g~-~~v~~ 189 (398)
T 4d9i_A 126 GVAWAAQQLGQNAVIY-----MPKGSAQ--------ERVDAILNLGAECIVTD-M-NYDDTVRLTMQHAQQHGW-EVVQD 189 (398)
T ss_dssp HHHHHHHHHTCEEEEE-----ECTTCCH--------HHHHHHHTTTCEEEECS-S-CHHHHHHHHHHHHHHHTC-EECCS
T ss_pred HHHHHHHHcCCCEEEE-----EeCCCCH--------HHHHHHHHcCCEEEEEC-C-CHHHHHHHHHHHHHHcCC-EEecC
Confidence 3667799999999885 4443333 44455667899988777 5 444777666665544211 11100
Q ss_pred ----HHHHhhhcCCCCCChhhHHHHHHHHHHHhcC-----CcEEEEEcCCchHHHHHHhc------CCCCCEEEEeCch
Q psy6272 408 ----VFEDLCALACPPLDPAHSIVIACVNAALKCQ-----AVAIIVITCSGYSAKLVSKY------RPQCPILAVSSLG 471 (547)
Q Consensus 408 ----~f~~~~~~~~~~~~~~~~ia~aav~~a~~~~-----a~aIvv~T~sG~tA~~isk~------RP~~pIiavt~~~ 471 (547)
-|++. +.....--...+.|+..++. .++||+.+-+|.++--++++ .|...|++|-+..
T Consensus 190 ~~~~g~~~~------~~~~~~G~~t~~~Ei~~q~~~~g~~~d~vvvpvG~GG~~aGi~~~~k~~~~~~~~~vigVep~~ 262 (398)
T 4d9i_A 190 TAWEGYTKI------PTWIMQGYATLADEAVEQMREMGVTPTHVLLQAGVGAMAGGVLGYLVDVYSPQNLHSIIVEPDK 262 (398)
T ss_dssp SCBTTBCHH------HHHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECSSSHHHHHHHHHHHHHHCTTSCEEEEEEETT
T ss_pred cccCCcCCC------CchhhhhHHHHHHHHHHHhhhcCCCCCEEEEecCccHHHHHHHHHHHHhcCCCCCEEEEEEeCC
Confidence 00000 00011112233345555442 68999999999987766654 3778899997753
No 322
>2bti_A Carbon storage regulator homolog; RMSA, CSRA, RNA binding protein; 2.0A {Yersinia enterocolitica} PDB: 1y00_A
Probab=45.75 E-value=31 Score=27.06 Aligned_cols=29 Identities=17% Similarity=0.250 Sum_probs=25.1
Q ss_pred cCCCCEEEEeceeEEEEEEEeCCeEEEEE
Q psy6272 185 VIPDDIVYIDRNIKLKVVEKENNDVHCTV 213 (547)
Q Consensus 185 v~~Gd~I~idD~I~l~V~~v~~~~v~~~V 213 (547)
-++|+.|.|+|.|..+|.++.++.|..=+
T Consensus 8 Rk~GE~I~Igd~I~I~Vl~i~g~~VrlGI 36 (63)
T 2bti_A 8 RRVGETLMIGDEVTVTVLGVKGNQVRIGV 36 (63)
T ss_dssp EETTCEEEETTTEEEEEEEEETTEEEEEE
T ss_pred ccCCCeEEeCCCEEEEEEEEeCCEEEEEE
Confidence 47899999999999999999999886544
No 323
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=45.66 E-value=42 Score=28.94 Aligned_cols=44 Identities=23% Similarity=0.075 Sum_probs=34.9
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhcCCCCCEEEEeCc
Q psy6272 426 IVIACVNAALKCQAVAIIVITC---------SGYSAKLVSKYRPQCPILAVSSL 470 (547)
Q Consensus 426 ia~aav~~a~~~~a~aIvv~T~---------sG~tA~~isk~RP~~pIiavt~~ 470 (547)
.+...++.|.+.+++.||+-++ -|.++..+.+.- +|||+.+-+.
T Consensus 108 ~~~~I~~~a~~~~~dlIV~G~~g~~~~~~~~~GSv~~~vl~~~-~~pVlvv~~~ 160 (162)
T 1mjh_A 108 PHEEIVKIAEDEGVDIIIMGSHGKTNLKEILLGSVTENVIKKS-NKPVLVVKRK 160 (162)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCSSCCTTCSSCHHHHHHHHHC-CSCEEEECCC
T ss_pred HHHHHHHHHHHcCCCEEEEcCCCCCCccceEecchHHHHHHhC-CCCEEEEeCC
Confidence 5566778888999999999876 367888888875 6999998543
No 324
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=45.39 E-value=57 Score=32.71 Aligned_cols=125 Identities=16% Similarity=0.094 Sum_probs=71.3
Q ss_pred HHHHHHHcCCcEEEEcCCCCCC-Cc--cc----ccccCccchhhHHHHHHhCccEEeeCCcchH----HHHHHHHHHHHH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDH-NV--EE----YSDVSIGDMNDVNSIVQDGADVVVLTQSEQA----HHRVDILKEILK 397 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~P-tr--aE----~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta----~eaV~~m~~I~~ 397 (547)
+...|+..|.++.+...=- .| .. .+ . .-+...-..|++.+... +..- .++.+.+.++..
T Consensus 84 lA~~a~~~G~~~~iv~p~~-~~~~~~~~~~~~~~--------~k~~~~~~~GA~v~~~~-~~~~~~~~~~~~~~a~~l~~ 153 (341)
T 1f2d_A 84 VAALAAKLGKKCVLIQEDW-VPIPEAEKDVYNRV--------GNIELSRIMGADVRVIE-DGFDIGMRKSFANALQELED 153 (341)
T ss_dssp HHHHHHHHTCEEEEEEECC-SCCCGGGTTTTTTS--------HHHHHHHHTTCEEEECC-CCCCSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHhCCceEEEeccC-CCcccccccccccc--------ccHHHHHhCCCEEEEeC-CccchhHHHHHHHHHHHHHh
Confidence 6677999999988752200 11 00 11 1 24555666899999887 4322 133444444433
Q ss_pred Hhhhhhhh-HHHHHHhhhcCCCCCChhhHHHHHHHHHHHhc-----CCcEEEEEcCCchHHHHHHh----cCCCCCEEEE
Q psy6272 398 KTESVLWE-KQVFEDLCALACPPLDPAHSIVIACVNAALKC-----QAVAIIVITCSGYSAKLVSK----YRPQCPILAV 467 (547)
Q Consensus 398 ~aE~~~~~-~~~f~~~~~~~~~~~~~~~~ia~aav~~a~~~-----~a~aIvv~T~sG~tA~~isk----~RP~~pIiav 467 (547)
+-...++. .+.|. .+.. .......+.|+..++ ..++||+..-+|.|+.-+++ ++|.+.|++|
T Consensus 154 ~~~~~~~i~~~~~~-------np~~-~~G~~t~~~Ei~~q~~~~~~~~d~vv~~vGtGgt~~Gi~~~~k~~~~~~~vigV 225 (341)
T 1f2d_A 154 AGHKPYPIPAGCSE-------HKYG-GLGFVGFADEVINQEVELGIKFDKIVVCCVTGSTTAGILAGMAQYGRQDDVIAI 225 (341)
T ss_dssp TTCCEEEECGGGTT-------STTT-TTHHHHHHHHHHHHHHHHTCCCSEEEEEESSSHHHHHHHHHHGGGTCGGGEEEE
T ss_pred cCCcEEEeCCCcCC-------CCcc-HHHHHHHHHHHHHHHHhcCCCCCEEEEecCchHhHHHHHHHHHhcCCCceEEEE
Confidence 32211111 11021 1111 122344456666554 57999999999999776664 5689999999
Q ss_pred eCch
Q psy6272 468 SSLG 471 (547)
Q Consensus 468 t~~~ 471 (547)
-+..
T Consensus 226 e~~~ 229 (341)
T 1f2d_A 226 DASF 229 (341)
T ss_dssp ECSS
T ss_pred EecC
Confidence 9864
No 325
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=45.30 E-value=2e+02 Score=27.93 Aligned_cols=68 Identities=15% Similarity=0.094 Sum_probs=38.9
Q ss_pred HHHHHHHHhcCCCceEEEEecCH-HHHhhHHHHHh---hcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 268 REMRGMLEDHVDRVLILAKIETL-LGMEYMDEIIM---ESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 268 ~~~r~~l~~~~~~i~IiakIEt~-~av~nldeIl~---~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
+.+.+.+.+.|-++.+..-=.+. .-.+.+++++. -.|||++.+ +-. ....+++.+.++|+||++.
T Consensus 24 ~g~~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~i~~~~~vDgiIi~~-~~~----------~~~~~~~~~~~~giPvV~~ 92 (350)
T 3h75_A 24 QFMQAAARDLGLDLRILYAERDPQNTLQQARELFQGRDKPDYLMLVN-EQY----------VAPQILRLSQGSGIKLFIV 92 (350)
T ss_dssp HHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHSSSCCSEEEEEC-CSS----------HHHHHHHHHTTSCCEEEEE
T ss_pred HHHHHHHHHcCCeEEEEECCCCHHHHHHHHHHHHhcCCCCCEEEEeC-chh----------hHHHHHHHHHhCCCcEEEE
Confidence 33444455555444433211111 12456777777 589999975 311 1234667788999999986
Q ss_pred cCC
Q psy6272 344 GDI 346 (547)
Q Consensus 344 Tq~ 346 (547)
..-
T Consensus 93 ~~~ 95 (350)
T 3h75_A 93 NSP 95 (350)
T ss_dssp ESC
T ss_pred cCC
Confidence 553
No 326
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=45.21 E-value=1.6e+02 Score=28.97 Aligned_cols=101 Identities=6% Similarity=0.005 Sum_probs=59.4
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCC-CceEEEEe-------c--CHHHHhhHHHHHhhcCEEEEcCC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVD-RVLILAKI-------E--TLLGMEYMDEIIMESDGVVLNRI 311 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~-~i~IiakI-------E--t~~av~nldeIl~~~DgImIarg 311 (547)
.+.++.+.+.|++.++++-+ +.++.+.+.++..+... ...+++-+ . +.+.++.|++.+..... +|=|
T Consensus 20 ~~vl~~a~~~gV~~~v~~g~-~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~~~~~~~~~~l~~l~~~~~v--vaIG 96 (287)
T 3rcm_A 20 AAIVERALEAGVTQMLLTGT-SLAVSEQALELCQQLDASGAHLFATAGVHPHDAKAWDTDSERQLRLLLSEPRV--RAVG 96 (287)
T ss_dssp HHHHHHHHHTTEEEEEECCC-SHHHHHHHHHHHHHHCTTSSSEEEEECCCGGGGGGCCTTHHHHHHHHHTSTTE--EEEE
T ss_pred HHHHHHHHHcCCeEEEEecC-CHHHHHHHHHHHHhCCCCCceEEEEEEECcCccccCCHHHHHHHHHHhcCCCe--EEEE
Confidence 34578899999999888744 56777777776654322 12243322 1 22345556665543333 3445
Q ss_pred cccccCCh-----HHHHHHHHHHHHHHHHcCCcEEEEcC
Q psy6272 312 QLAVATSV-----EVTFLAQKMIAARCNKQGKPFLVVGD 345 (547)
Q Consensus 312 DLg~e~~~-----e~v~~~qk~ii~~c~~~gKPvi~aTq 345 (547)
..|.+... +.=..+-++.++.|++.|+||++.|.
T Consensus 97 EiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~r 135 (287)
T 3rcm_A 97 ECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHER 135 (287)
T ss_dssp EEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred EeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEcC
Confidence 66666543 11112334567889999999999764
No 327
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=44.71 E-value=1.4e+02 Score=28.18 Aligned_cols=101 Identities=10% Similarity=0.079 Sum_probs=63.5
Q ss_pred HHHHHHHHHcCCcEEEEccc-------CChhhHHHHHHHHHhcCCCceEEEE-ec------CHHHHhhHHHHHhh-----
Q psy6272 242 KHVVDLIVREAVDIIIMSSV-------TGANSIREMRGMLEDHVDRVLILAK-IE------TLLGMEYMDEIIME----- 302 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV-------~sa~di~~~r~~l~~~~~~i~Iiak-IE------t~~av~nldeIl~~----- 302 (547)
.+.++.+.++|+|+|-+... .+.+++.++++.+.+.|-.+..++- .. ..+.++.+.+.+..
T Consensus 18 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG 97 (286)
T 3dx5_A 18 TDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLAILANWFK 97 (286)
T ss_dssp HHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHHHHHHHhC
Confidence 34588999999999998432 2347888999999887765444321 10 12445566666655
Q ss_pred cCEEEEcCCcccccCC----hHHHHHHHHHHHHHHHHcCCcEEE
Q psy6272 303 SDGVVLNRIQLAVATS----VEVTFLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 303 ~DgImIargDLg~e~~----~e~v~~~qk~ii~~c~~~gKPvi~ 342 (547)
+..|.+..|...-... .+.+...-+++...|+++|..+.+
T Consensus 98 ~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 141 (286)
T 3dx5_A 98 TNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLL 141 (286)
T ss_dssp CCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 3677676665432211 234455556677788888887766
No 328
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=44.62 E-value=50 Score=31.65 Aligned_cols=109 Identities=10% Similarity=0.083 Sum_probs=59.6
Q ss_pred cCCCCCChhhHHH-HHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecC-------HHHHhhHHHHHhhc
Q psy6272 232 FNLPVIADRDKHV-VDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIET-------LLGMEYMDEIIMES 303 (547)
Q Consensus 232 ~~lp~lt~~D~~d-i~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt-------~~av~nldeIl~~~ 303 (547)
++.+.+. .|.++ ++.+-+.|++.++++-. +.++...+.++..+.. ++...+-+=- .++++.|++.+.
T Consensus 20 l~~~~~~-~~~~~~l~~~~~~GV~~~v~~~~-~~~~~~~~~~l~~~~p-~i~~~~G~hP~~~~~~~~~~~~~l~~~~~-- 94 (268)
T 1j6o_A 20 LHFHQFD-DDRNAVISSFEENNIEFVVNVGV-NLEDSKKSLDLSKTSD-RIFCSVGVHPHDAKEVPEDFIEHLEKFAK-- 94 (268)
T ss_dssp TTSGGGT-TTHHHHHHTTTTTTEEEEEEECS-SHHHHHHHHHHHTTCT-TEEEEECCCGGGGGGCCTTHHHHHHHHTT--
T ss_pred CCChhhc-cCHHHHHHHHHHcCCCEEEEeCC-CHHHHHHHHHHHHHCC-CEEEEEeeccccccccCHHHHHHHHHHhc--
Confidence 4444443 34444 55667789998777654 5677777777665433 3332222211 133455555443
Q ss_pred CEEEEcCCcccccCCh-----HHHHHHHHHHHHHHHHcCCcEEEEcC
Q psy6272 304 DGVVLNRIQLAVATSV-----EVTFLAQKMIAARCNKQGKPFLVVGD 345 (547)
Q Consensus 304 DgImIargDLg~e~~~-----e~v~~~qk~ii~~c~~~gKPvi~aTq 345 (547)
+.-.++-|..|+.... +.=...-...++.|++.|+||++.|.
T Consensus 95 ~~~~~~iGe~Gld~~~~~~~~~~q~~~f~~~~~~a~~~~lPv~iH~~ 141 (268)
T 1j6o_A 95 DEKVVAIGETGLDFFRNISPAEVQKRVFVEQIELAGKLNLPLVVHIR 141 (268)
T ss_dssp STTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEE
T ss_pred cCCEEEEEccccCCcccCCChHHHHHHHHHHHHHHHHhCCCEEEEeC
Confidence 2223344556665533 11112335678889999999999753
No 329
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=44.57 E-value=1.6e+02 Score=30.80 Aligned_cols=127 Identities=9% Similarity=0.101 Sum_probs=69.9
Q ss_pred CCCChhhHHHH--------HHHHHcCCcEEEEcc-------------cCChh-----------------hHHHHHHHHHh
Q psy6272 235 PVIADRDKHVV--------DLIVREAVDIIIMSS-------------VTGAN-----------------SIREMRGMLED 276 (547)
Q Consensus 235 p~lt~~D~~di--------~~~~~~g~d~I~~sf-------------V~sa~-----------------di~~~r~~l~~ 276 (547)
-.||..|++.+ ++|.+.|+|+|=+-. .+... -++++|+.+++
T Consensus 158 r~mt~~eI~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~ 237 (419)
T 3l5a_A 158 IAMSHEKINSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDK 237 (419)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhh
Confidence 35788888776 467889999998843 33221 12223333322
Q ss_pred -cCCCceEEEEecC------------HHHHhhHHHHHh-h-cCEEEEcCCcccc---c---CChHHHHHHHHHHHHHHHH
Q psy6272 277 -HVDRVLILAKIET------------LLGMEYMDEIIM-E-SDGVVLNRIQLAV---A---TSVEVTFLAQKMIAARCNK 335 (547)
Q Consensus 277 -~~~~i~IiakIEt------------~~av~nldeIl~-~-~DgImIargDLg~---e---~~~e~v~~~qk~ii~~c~~ 335 (547)
.+.+..|..||=- .+.++-+..+.+ . .|.|-|.-|+... . .|.. .+...++..++
T Consensus 238 ~~~~~f~v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~----~~~~~a~~Ik~ 313 (419)
T 3l5a_A 238 EAPDNFILGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDH----FGRPVNQIVYE 313 (419)
T ss_dssp HCCTTCEEEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTT----TTSBHHHHHHH
T ss_pred hcCCCeeEEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCcc----ccHHHHHHHHH
Confidence 2566777777732 123333444444 3 6888888776411 0 1110 01112222222
Q ss_pred -c--CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 336 -Q--GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 336 -~--gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
. .+|||....+. + . .++..++.. +|.|++.
T Consensus 314 ~v~~~iPVI~~GgI~-t-----~--------e~Ae~~L~~-aDlVaiG 346 (419)
T 3l5a_A 314 HLAGRIPLIASGGIN-S-----P--------ESALDALQH-ADMVGMS 346 (419)
T ss_dssp HHTTSSCEEECSSCC-S-----H--------HHHHHHGGG-CSEEEES
T ss_pred HcCCCCeEEEECCCC-C-----H--------HHHHHHHHh-CCcHHHH
Confidence 2 48999876543 2 2 445567778 9999998
No 330
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=44.51 E-value=53 Score=32.85 Aligned_cols=68 Identities=16% Similarity=0.200 Sum_probs=48.5
Q ss_pred hHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHH-----------hhcCEEEEcCCcccccCChHHHHHHHHHHHHHHH
Q psy6272 266 SIREMRGMLEDHVDRVLILAKIETLLGMEYMDEII-----------MESDGVVLNRIQLAVATSVEVTFLAQKMIAARCN 334 (547)
Q Consensus 266 di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl-----------~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~ 334 (547)
-++.+++.|.+.|.++.|.+.-+.....+|+++++ +-.|.|+-+-.++ .....+-+.|.
T Consensus 90 Ka~aa~~~L~~iNP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~----------~~R~~in~~c~ 159 (292)
T 3h8v_A 90 KVQAAEHTLRNINPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNF----------EARMTINTACN 159 (292)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSH----------HHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcch----------hhhhHHHHHHH
Confidence 35566777777888888888766666667788776 3467777553332 34556888999
Q ss_pred HcCCcEEEE
Q psy6272 335 KQGKPFLVV 343 (547)
Q Consensus 335 ~~gKPvi~a 343 (547)
++|||.+.+
T Consensus 160 ~~~~Pli~~ 168 (292)
T 3h8v_A 160 ELGQTWMES 168 (292)
T ss_dssp HHTCCEEEE
T ss_pred HhCCCEEEe
Confidence 999999864
No 331
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=44.49 E-value=56 Score=33.18 Aligned_cols=106 Identities=12% Similarity=0.129 Sum_probs=64.4
Q ss_pred hhhHH-HHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCC--CceEEEEe-------cC--HH-HHhhHHHHHhhcCE
Q psy6272 239 DRDKH-VVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVD--RVLILAKI-------ET--LL-GMEYMDEIIMESDG 305 (547)
Q Consensus 239 ~~D~~-di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~--~i~IiakI-------Et--~~-av~nldeIl~~~Dg 305 (547)
+.|.+ .|..|.+.|++.++++-+ +.++.+.+.++.++... .+.+++-+ .. .+ .++.|.+.+...+.
T Consensus 51 ~~d~~~vl~rA~~aGV~~ii~~g~-~~~~~~~~~~La~~~~~~~~~~v~~~~GiHP~~~~~~~~~~~l~~L~~l~~~~~~ 129 (325)
T 3ipw_A 51 EEDIDVVLQRAERNGLSHIIITSG-CLNDFKKAIEIINKYQNLTNIKLVTTIGVHPTRTNELKQEGYLDELLLLCEKNID 129 (325)
T ss_dssp CCCHHHHHHHHHHTTEEEEEECCC-SHHHHHHHHHHHHHHGGGCSSEEEEEECCCGGGGGGGGSTTHHHHHHHHHHHTGG
T ss_pred ccCHHHHHHHHHHcCCcEEEEccC-CHHHHHHHHHHHHHCCCcccceEEEEEEECcchhhcCCchHHHHHHHHHHhcCCC
Confidence 34544 578999999999888865 57777777776654321 11344332 11 11 45666676665433
Q ss_pred EEEcCCcccccCCh-H-HHHHHH----HHHHHHHHH-cCCcEEEEcC
Q psy6272 306 VVLNRIQLAVATSV-E-VTFLAQ----KMIAARCNK-QGKPFLVVGD 345 (547)
Q Consensus 306 ImIargDLg~e~~~-e-~v~~~q----k~ii~~c~~-~gKPvi~aTq 345 (547)
=++|=|+.|.+... . .-...| ++-++.|++ .++||++.|.
T Consensus 130 ~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~r 176 (325)
T 3ipw_A 130 KVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHCR 176 (325)
T ss_dssp GEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEEE
T ss_pred CEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 45566777777642 1 011223 345678999 9999998753
No 332
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=44.36 E-value=2.4e+02 Score=28.91 Aligned_cols=117 Identities=11% Similarity=0.098 Sum_probs=65.5
Q ss_pred CCChhhHHHH--------HHHHHcCCcEEEEccc-------------CChh---------hHHHHHHH---HH-hcCCCc
Q psy6272 236 VIADRDKHVV--------DLIVREAVDIIIMSSV-------------TGAN---------SIREMRGM---LE-DHVDRV 281 (547)
Q Consensus 236 ~lt~~D~~di--------~~~~~~g~d~I~~sfV-------------~sa~---------di~~~r~~---l~-~~~~~i 281 (547)
.||..|++.+ +.|.+.|+|+|=+-.- +... ..+.+.+. +. ..+.+
T Consensus 142 ~mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR~rf~~eiv~aVr~~vg~~- 220 (362)
T 4ab4_A 142 ALETEEINDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENRARLLLEVTDAAIEVWGAQ- 220 (362)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhHHHHHHHHHHHHHHhcCCC-
Confidence 5788888776 4678899999988543 2221 12222222 21 12444
Q ss_pred eEEEEecCHH---------HHhhHHHHHhh-----cCEEEEcCCcccccCChHHHHHHHHHHHHHH-HHcCCcEEEEcCC
Q psy6272 282 LILAKIETLL---------GMEYMDEIIME-----SDGVVLNRIQLAVATSVEVTFLAQKMIAARC-NKQGKPFLVVGDI 346 (547)
Q Consensus 282 ~IiakIEt~~---------av~nldeIl~~-----~DgImIargDLg~e~~~e~v~~~qk~ii~~c-~~~gKPvi~aTq~ 346 (547)
.|..||=-.+ .++..-++++. .|.|=+..|..+ .+ .++.. +..++|||....+
T Consensus 221 ~v~vRls~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~----~~--------~~~~ik~~~~iPvi~~Ggi 288 (362)
T 4ab4_A 221 RVGVHLAPRADAHDMGDADRAETFTYVARELGKRGIAFICSREREAD----DS--------IGPLIKEAFGGPYIVNERF 288 (362)
T ss_dssp GEEEEECTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCCT----TC--------CHHHHHHHHCSCEEEESSC
T ss_pred ceEEEeeccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCCC----HH--------HHHHHHHHCCCCEEEeCCC
Confidence 6778874221 12333333333 488877655422 11 11222 2347899987552
Q ss_pred CCCCCcccccccCccchhhHHHHHHhC-ccEEeeC
Q psy6272 347 LPDHNVEEYSDVSIGDMNDVNSIVQDG-ADVVVLT 380 (547)
Q Consensus 347 Le~PtraE~~~~~~~~~~Dv~nav~~g-~D~vmLs 380 (547)
+ . .++..++..| +|.|++.
T Consensus 289 ----t---~--------e~a~~~l~~g~aD~V~iG 308 (362)
T 4ab4_A 289 ----D---K--------ASANAALASGKADAVAFG 308 (362)
T ss_dssp ----C---H--------HHHHHHHHTTSCSEEEES
T ss_pred ----C---H--------HHHHHHHHcCCccEEEEC
Confidence 2 2 4555678887 9999998
No 333
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=44.24 E-value=1e+02 Score=28.96 Aligned_cols=117 Identities=12% Similarity=0.090 Sum_probs=60.5
Q ss_pred hHHHHHHHHHcCCcEEEEcc--cCChhhHHHHHHHHHhcCCCceEEE-----EecCH--------HHHhhHHHHHhh-cC
Q psy6272 241 DKHVVDLIVREAVDIIIMSS--VTGANSIREMRGMLEDHVDRVLILA-----KIETL--------LGMEYMDEIIME-SD 304 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sf--V~sa~di~~~r~~l~~~~~~i~Iia-----kIEt~--------~av~nldeIl~~-~D 304 (547)
+.+++..+++.|+|+|++.- ..+++.+.++ ...+..+.+-. ++++. ...+-+..+.+. ++
T Consensus 84 ~~~~~~~~~~~Gad~V~lg~~~l~~p~~~~~~----~~~g~~i~~~~d~~~~~v~~~g~~~~~~~~~~e~~~~~~~~G~~ 159 (241)
T 1qo2_A 84 SLDYAEKLRKLGYRRQIVSSKVLEDPSFLKSL----REIDVEPVFSLDTRGGRVAFKGWLAEEEIDPVSLLKRLKEYGLE 159 (241)
T ss_dssp SHHHHHHHHHTTCCEEEECHHHHHCTTHHHHH----HTTTCEEEEEEEEETTEECCTTCSSCSCCCHHHHHHHHHTTTCC
T ss_pred CHHHHHHHHHCCCCEEEECchHhhChHHHHHH----HHcCCcEEEEEEecCCEEEECCceecCCCCHHHHHHHHHhCCCC
Confidence 45678888889999998853 2344444444 33343332212 23321 112222333333 57
Q ss_pred EEEEcCCc-ccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHh-----C-ccEE
Q psy6272 305 GVVLNRIQ-LAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQD-----G-ADVV 377 (547)
Q Consensus 305 gImIargD-Lg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~-----g-~D~v 377 (547)
.|++..-+ =+...|+ .+..+ +++ ++..++||+....+- .. .|+...... | +|++
T Consensus 160 ~i~~t~~~~~g~~~g~-~~~~i-~~l---~~~~~iPvia~GGI~------~~--------~d~~~~~~~~~~~~G~adgv 220 (241)
T 1qo2_A 160 EIVHTEIEKDGTLQEH-DFSLT-KKI---AIEAEVKVLAAGGIS------SE--------NSLKTAQKVHTETNGLLKGV 220 (241)
T ss_dssp EEEEEETTHHHHTCCC-CHHHH-HHH---HHHHTCEEEEESSCC------SH--------HHHHHHHHHHHHTTTSEEEE
T ss_pred EEEEEeecccccCCcC-CHHHH-HHH---HHhcCCcEEEECCCC------CH--------HHHHHHHhcccccCCeEeEE
Confidence 77774211 0111122 12111 222 334489999987632 13 677777766 9 9999
Q ss_pred eeC
Q psy6272 378 VLT 380 (547)
Q Consensus 378 mLs 380 (547)
++.
T Consensus 221 ~vg 223 (241)
T 1qo2_A 221 IVG 223 (241)
T ss_dssp EEC
T ss_pred Eee
Confidence 997
No 334
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=44.03 E-value=2.6e+02 Score=28.28 Aligned_cols=117 Identities=15% Similarity=0.102 Sum_probs=72.3
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHhhhhhhhHHH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQV 408 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~aE~~~~~~~~ 408 (547)
+...|++.|.++.+. .|..... .-+.+.-..|++.+... + +-.++.+...++.++-... +.
T Consensus 123 ~A~aa~~~G~~~~iv-----~P~~~~~--------~k~~~~~~~GA~V~~v~-~-~~~~~~~~a~~~~~~~~~~-~i--- 183 (366)
T 3iau_A 123 VALAGQRLNCVAKIV-----MPTTTPQ--------IKIDAVRALGGDVVLYG-K-TFDEAQTHALELSEKDGLK-YI--- 183 (366)
T ss_dssp HHHHHHHTTCCEEEE-----ECTTCCH--------HHHHHHHHTTCEEEECC-S-SHHHHHHHHHHHHHHHTCE-EC---
T ss_pred HHHHHHHhCCceEEE-----eCCCCCH--------HHHHHHHHCCCeEEEEC-c-CHHHHHHHHHHHHHhcCCE-ec---
Confidence 566789999998875 4554333 44556667899977776 3 4446766665555442111 10
Q ss_pred HHHhhhcCCCCCCh--hhHHHHHHHHHHHhc-CCcEEEEEcCCchHHHHHHh----cCCCCCEEEEeCchh
Q psy6272 409 FEDLCALACPPLDP--AHSIVIACVNAALKC-QAVAIIVITCSGYSAKLVSK----YRPQCPILAVSSLGY 472 (547)
Q Consensus 409 f~~~~~~~~~~~~~--~~~ia~aav~~a~~~-~a~aIvv~T~sG~tA~~isk----~RP~~pIiavt~~~~ 472 (547)
.+..++ .......+.|+..++ ..++|++.+-+|.+.--+++ +.|.+.|++|.+...
T Consensus 184 --------~~~~n~~~i~g~~t~~~Ei~~q~~~~d~vvvpvG~GG~~~Gi~~~~k~~~~~~~vigVe~~~~ 246 (366)
T 3iau_A 184 --------PPFDDPGVIKGQGTIGTEINRQLKDIHAVFIPVGGGGLIAGVATFFKQIAPNTKIIGVEPYGA 246 (366)
T ss_dssp --------CSSSSHHHHHHHHHHHHHHHHHCCSEEEEEEECSSSHHHHHHHHHHHHHSTTSEEEEEEEGGG
T ss_pred --------CCCCChHHHHHHHHHHHHHHHhcCCCCEEEEccCchHHHHHHHHHHHHhCCCCeEEEEeecCC
Confidence 111111 112223356666665 56889999999988765443 479999999988653
No 335
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=43.85 E-value=12 Score=32.09 Aligned_cols=62 Identities=10% Similarity=0.000 Sum_probs=44.8
Q ss_pred hHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEE
Q psy6272 266 SIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 266 di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~ 342 (547)
=+.+++++.++.|-++.|.|. +...+++.+.-.|.|++|| .+....+++-+.|...|+||.+
T Consensus 22 lv~km~~~a~~~gi~v~i~a~-----~~~~~~~~~~~~DvvLLgP----------QV~y~~~~ik~~~~~~~ipV~v 83 (108)
T 3nbm_A 22 LANAINEGANLTEVRVIANSG-----AYGAHYDIMGVYDLIILAP----------QVRSYYREMKVDAERLGIQIVA 83 (108)
T ss_dssp HHHHHHHHHHHHTCSEEEEEE-----ETTSCTTTGGGCSEEEECG----------GGGGGHHHHHHHHTTTTCEEEE
T ss_pred HHHHHHHHHHHCCCceEEEEc-----chHHHHhhccCCCEEEECh----------HHHHHHHHHHHHhhhcCCcEEE
Confidence 467778888887877777763 3334666777789999993 3444556677778889999987
No 336
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=43.81 E-value=62 Score=31.08 Aligned_cols=67 Identities=16% Similarity=0.132 Sum_probs=46.5
Q ss_pred hHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 266 SIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 266 di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-++.+.+.+.+.+..+.+.+.-+... -+|+++++.-+|.|+.+-++. .....+.+.|++.|+|++.+
T Consensus 86 Ka~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~~----------~~~~~l~~~~~~~~~p~i~~ 152 (249)
T 1jw9_B 86 KVESARDALTRINPHIAITPVNALLD-DAELAALIAEHDLVLDCTDNV----------AVRNQLNAGCFAAKVPLVSG 152 (249)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHTSSEEEECCSSH----------HHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHCCCcEEEEEeccCC-HhHHHHHHhCCCEEEEeCCCH----------HHHHHHHHHHHHcCCCEEEe
Confidence 35566666776676666655433222 257888888899999885443 24566888899999999986
No 337
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=43.81 E-value=1.9e+02 Score=29.15 Aligned_cols=117 Identities=8% Similarity=-0.023 Sum_probs=63.6
Q ss_pred HHHHHHHHHcCCcEEEEcc-cCChhhHHHHHHHHHhcCCCceEEEEecCH--HHHhhHHHHHhh-----cCEEEEcCCcc
Q psy6272 242 KHVVDLIVREAVDIIIMSS-VTGANSIREMRGMLEDHVDRVLILAKIETL--LGMEYMDEIIME-----SDGVVLNRIQL 313 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sf-V~sa~di~~~r~~l~~~~~~i~IiakIEt~--~av~nldeIl~~-----~DgImIargDL 313 (547)
.++++.+.+.|+|.|.++. ++..+.+.++.+++.+.|.. ++.-+|+. ...+.+-++++. +|.|-+. +=.
T Consensus 96 ~~~i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~~--v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l~-DT~ 172 (345)
T 1nvm_A 96 VHDLKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGMD--TVGFLMMSHMIPAEKLAEQGKLMESYGATCIYMA-DSG 172 (345)
T ss_dssp HHHHHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHTCE--EEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEEE-CTT
T ss_pred HHHHHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCCCE--EEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEEC-CCc
Confidence 4578999999999988864 22235666666666666654 44445332 223445555544 4655443 223
Q ss_pred cccCChHHHHHHHHHHHHHHHH-c--CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEE
Q psy6272 314 AVATSVEVTFLAQKMIAARCNK-Q--GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVV 377 (547)
Q Consensus 314 g~e~~~e~v~~~qk~ii~~c~~-~--gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~v 377 (547)
|.-. |..-.++++..++ . +.|+.+.++ +-.=--+ .....|+..|+|.+
T Consensus 173 G~~~-----P~~v~~lv~~l~~~~~~~~pi~~H~H---n~~G~av--------An~laA~~aGa~~v 223 (345)
T 1nvm_A 173 GAMS-----MNDIRDRMRAFKAVLKPETQVGMHAH---HNLSLGV--------ANSIVAVEEGCDRV 223 (345)
T ss_dssp CCCC-----HHHHHHHHHHHHHHSCTTSEEEEECB---CTTSCHH--------HHHHHHHHTTCCEE
T ss_pred CccC-----HHHHHHHHHHHHHhcCCCceEEEEEC---CCccHHH--------HHHHHHHHcCCCEE
Confidence 3322 3333334444443 4 689999876 2111112 34446777887654
No 338
>3cwc_A Putative glycerate kinase 2; structural genomics, center for structural genomics of infec diseases, csgid, IDP122, transferase; 2.23A {Salmonella typhimurium LT2}
Probab=43.73 E-value=62 Score=33.86 Aligned_cols=61 Identities=13% Similarity=0.163 Sum_probs=44.6
Q ss_pred eEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcC
Q psy6272 282 LILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGD 345 (547)
Q Consensus 282 ~IiakIEt~~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq 345 (547)
.+..-||-..-.-+|++.++-+|-|+-|-|=+=-..-.-++|.- +.+.|+++|||||.-+.
T Consensus 267 ~l~~Gi~~v~~~~~l~~~l~~ADLVITGEG~~D~Qtl~GK~p~g---Va~~A~~~~vPviaiaG 327 (383)
T 3cwc_A 267 QLRRGIEIVTDALHLEACLADADLVITGEGRIDSQTIHGKVPIG---VANIAKRYNKPVIGIAG 327 (383)
T ss_dssp EEECHHHHHHHHTTHHHHHHHCSEEEECCEESCC----CHHHHH---HHHHHHHTTCCEEEEEE
T ss_pred EEccHHHHHHHHhChHhhhcCCCEEEECCCCCcCcCCCCcHHHH---HHHHHHHhCCCEEEEeC
Confidence 46666777777779999999999999998877665555566643 55679999999987654
No 339
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=43.70 E-value=1.6e+02 Score=28.87 Aligned_cols=119 Identities=9% Similarity=0.026 Sum_probs=62.2
Q ss_pred HHHHHHHHHcCCcEEEEcccCC------------hhhHHHHH---HHHHhcCCCceE-EEEe---c--CHHHHhhHHHHH
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTG------------ANSIREMR---GMLEDHVDRVLI-LAKI---E--TLLGMEYMDEII 300 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~s------------a~di~~~r---~~l~~~~~~i~I-iakI---E--t~~av~nldeIl 300 (547)
.++++.+++.|++.|.+..--| .+.++.++ +++.+.|..+.. +... | +..-.+.+.+++
T Consensus 82 ~~~i~~a~~~G~~~V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~ 161 (295)
T 1ydn_A 82 MKGYEAAAAAHADEIAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVT 161 (295)
T ss_dssp HHHHHHHHHTTCSEEEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHH
T ss_pred HHHHHHHHHCCCCEEEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHH
Confidence 6789999999999999974222 23444444 444555554330 1111 1 122233333333
Q ss_pred h----h-cCEEEEcCCc-ccccCChHHHHHHHHHHHHHHHH-cC-CcEEEEcCCCCCCCcc-cccccCccchhhHHHHHH
Q psy6272 301 M----E-SDGVVLNRIQ-LAVATSVEVTFLAQKMIAARCNK-QG-KPFLVVGDILPDHNVE-EYSDVSIGDMNDVNSIVQ 371 (547)
Q Consensus 301 ~----~-~DgImIargD-Lg~e~~~e~v~~~qk~ii~~c~~-~g-KPvi~aTq~Le~Ptra-E~~~~~~~~~~Dv~nav~ 371 (547)
+ . +|.|-++ | .|+ ..++.+. ++++..++ .. .|+.+.++ + ++. -+ .....|+.
T Consensus 162 ~~~~~~G~d~i~l~--Dt~G~-~~P~~~~----~lv~~l~~~~~~~~l~~H~H---n-~~Gla~--------an~l~Ai~ 222 (295)
T 1ydn_A 162 EQLFSLGCHEVSLG--DTIGR-GTPDTVA----AMLDAVLAIAPAHSLAGHYH---D-TGGRAL--------DNIRVSLE 222 (295)
T ss_dssp HHHHHHTCSEEEEE--ETTSC-CCHHHHH----HHHHHHHTTSCGGGEEEEEB---C-TTSCHH--------HHHHHHHH
T ss_pred HHHHhcCCCEEEec--CCCCC-cCHHHHH----HHHHHHHHhCCCCeEEEEEC---C-CcchHH--------HHHHHHHH
Confidence 3 2 5888887 4 222 2223333 33443333 33 68888764 2 211 11 44567888
Q ss_pred hCccEEee
Q psy6272 372 DGADVVVL 379 (547)
Q Consensus 372 ~g~D~vmL 379 (547)
.|++.+=.
T Consensus 223 aG~~~vd~ 230 (295)
T 1ydn_A 223 KGLRVFDA 230 (295)
T ss_dssp HTCCEEEE
T ss_pred hCCCEEEe
Confidence 89887654
No 340
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=43.62 E-value=1.9e+02 Score=26.75 Aligned_cols=101 Identities=11% Similarity=0.085 Sum_probs=62.1
Q ss_pred HHHHHHHHHcCCcEEEEcccC------ChhhHHHHHHHHHhcCCCceEEE-E--ec--C----HHHHhhHHHHHhhc---
Q psy6272 242 KHVVDLIVREAVDIIIMSSVT------GANSIREMRGMLEDHVDRVLILA-K--IE--T----LLGMEYMDEIIMES--- 303 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~------sa~di~~~r~~l~~~~~~i~Iia-k--IE--t----~~av~nldeIl~~~--- 303 (547)
.+.++.+.+.|+|+|-+.... +..+++++++.+++.|-.+..+. - +- . .++++.+...+..+
T Consensus 17 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~l 96 (278)
T 1i60_A 17 KLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMETCKTL 96 (278)
T ss_dssp HHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHHHHHc
Confidence 345788999999999998222 34788899999988765443221 1 11 1 23456666666553
Q ss_pred --CEEEEcCCcccccCC----hHHHHHHHHHHHHHHHHcCCcEEE
Q psy6272 304 --DGVVLNRIQLAVATS----VEVTFLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 304 --DgImIargDLg~e~~----~e~v~~~qk~ii~~c~~~gKPvi~ 342 (547)
+.|.+.+|.-.-..+ ++.+...-+++...|+++|..+.+
T Consensus 97 G~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l 141 (278)
T 1i60_A 97 GVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIAL 141 (278)
T ss_dssp TCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred CCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEE
Confidence 566664443211123 345555666777888888887776
No 341
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=43.30 E-value=49 Score=31.06 Aligned_cols=101 Identities=13% Similarity=0.119 Sum_probs=65.9
Q ss_pred HHHHHHHHHcCCcEEEEcccC-ChhhHHHHHHHHHhcCCCceEEE---EecC------HHHHhhHHHHHhh-----cCEE
Q psy6272 242 KHVVDLIVREAVDIIIMSSVT-GANSIREMRGMLEDHVDRVLILA---KIET------LLGMEYMDEIIME-----SDGV 306 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~-sa~di~~~r~~l~~~~~~i~Iia---kIEt------~~av~nldeIl~~-----~DgI 306 (547)
.+.++.+.++|+|+|-+..-. +..+++++++.+++.|-.+..+. .+-+ .++++.+...+.. ++.|
T Consensus 21 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~~~v 100 (275)
T 3qc0_A 21 AEAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGADCL 100 (275)
T ss_dssp HHHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTCSCE
T ss_pred HHHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 345889999999999886521 45778999999988775543332 1211 2455666666666 3677
Q ss_pred EEcCCcccc-cCC----hHHHHHHHHHHHHHHHHcCCcEEE
Q psy6272 307 VLNRIQLAV-ATS----VEVTFLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 307 mIargDLg~-e~~----~e~v~~~qk~ii~~c~~~gKPvi~ 342 (547)
.+..|...- ... ++.+...-+++...|.++|..+.+
T Consensus 101 ~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l 141 (275)
T 3qc0_A 101 VLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAI 141 (275)
T ss_dssp EEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred EEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 776665431 112 245556667788888889988776
No 342
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=43.23 E-value=2.1e+02 Score=26.65 Aligned_cols=89 Identities=6% Similarity=-0.019 Sum_probs=57.4
Q ss_pred HHHHHHHHHcCCcEEEEccc---------------CChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh----
Q psy6272 242 KHVVDLIVREAVDIIIMSSV---------------TGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME---- 302 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV---------------~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~---- 302 (547)
.+.++.+.+.|+|+|-+... .+.++++++++.+++.|-.+..+.-- .....+.+...+..
T Consensus 25 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~-~~~~~~~~~~~i~~A~~l 103 (262)
T 3p6l_A 25 TEALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAASKGIKIVGTGVY-VAEKSSDWEKMFKFAKAM 103 (262)
T ss_dssp HHHHHHHHHTTCCEEEECTTEECCGGGTTCEESTTCCHHHHHHHHHHHHHTTCEEEEEEEE-CCSSTTHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCCEEeecCCcccccccccccccccCCHHHHHHHHHHHHHcCCeEEEEecc-CCccHHHHHHHHHHHHHc
Confidence 45578999999999998643 35778999999999887654433321 11233344444444
Q ss_pred -cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEE
Q psy6272 303 -SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 303 -~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~ 342 (547)
++.|.+.+|. +.+ +++...|+++|..+.+
T Consensus 104 Ga~~v~~~~~~-------~~~----~~l~~~a~~~gv~l~~ 133 (262)
T 3p6l_A 104 DLEFITCEPAL-------SDW----DLVEKLSKQYNIKISV 133 (262)
T ss_dssp TCSEEEECCCG-------GGH----HHHHHHHHHHTCEEEE
T ss_pred CCCEEEecCCH-------HHH----HHHHHHHHHhCCEEEE
Confidence 3677776552 222 5677788888887665
No 343
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=43.05 E-value=1.2e+02 Score=29.92 Aligned_cols=91 Identities=12% Similarity=0.154 Sum_probs=52.0
Q ss_pred hHHHHHHHHHcCCcEEE--Ecc---cCChhhHHHH-----------------HHHHHhcCCCceEEEEec-CH---HHHh
Q psy6272 241 DKHVVDLIVREAVDIII--MSS---VTGANSIREM-----------------RGMLEDHVDRVLILAKIE-TL---LGME 294 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~--~sf---V~sa~di~~~-----------------r~~l~~~~~~i~IiakIE-t~---~av~ 294 (547)
-.+.++...+.|+|+|- +|| +-+.--|+.. .+.+.+.+.++.++.+.- ++ -|++
T Consensus 34 ~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e 113 (267)
T 3vnd_A 34 SLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGID 113 (267)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHH
Confidence 45666777789999864 556 2222223321 122232334667777754 43 3555
Q ss_pred hHHHHH-hh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEE
Q psy6272 295 YMDEII-ME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFL 341 (547)
Q Consensus 295 nldeIl-~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi 341 (547)
++-+-+ ++ +||+++. ||. +++ ..+.+..|+++|...+
T Consensus 114 ~f~~~~~~aGvdgvii~--Dlp----~ee----~~~~~~~~~~~gl~~i 152 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLIA--DVP----VEE----SAPFSKAAKAHGIAPI 152 (267)
T ss_dssp HHHHHHHHHTCCEEEET--TSC----GGG----CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHcCCCEEEeC--CCC----Hhh----HHHHHHHHHHcCCeEE
Confidence 543333 33 6999995 555 443 3457788999998755
No 344
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=42.87 E-value=2.7e+02 Score=27.86 Aligned_cols=118 Identities=9% Similarity=0.082 Sum_probs=72.6
Q ss_pred HHHHHHHHHcCCcEEEEcccCCh--hhHHHHHHHHHhcCCCceEEEEe---cCHHHHhhHHHHHhh-cCEEEEcCCcccc
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGA--NSIREMRGMLEDHVDRVLILAKI---ETLLGMEYMDEIIME-SDGVVLNRIQLAV 315 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa--~di~~~r~~l~~~~~~i~IiakI---Et~~av~nldeIl~~-~DgImIargDLg~ 315 (547)
++||..+.+.|+|+|.+-+.+.- -|+..++++++..+. +.+.-.= +.....+.++.++.. .|.|+-+-+.-++
T Consensus 114 ~~dI~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~~a~~-l~vTFHRAFD~~~d~~~Ale~Li~lGvdrILTSG~~~~a 192 (287)
T 3iwp_A 114 KADIRLAKLYGADGLVFGALTEDGHIDKELCMSLMAICRP-LPVTFHRAFDMVHDPMAALETLLTLGFERVLTSGCDSSA 192 (287)
T ss_dssp HHHHHHHHHTTCSEEEECCBCTTSCBCHHHHHHHHHHHTT-SCEEECGGGGGCSCHHHHHHHHHHHTCSEEEECTTSSST
T ss_pred HHHHHHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHHHcCC-CcEEEECchhccCCHHHHHHHHHHcCCCEEECCCCCCCh
Confidence 46788999999999999985443 688889988876543 2322210 011245567777774 7999998776666
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHH-hCccEEeeC
Q psy6272 316 ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQ-DGADVVVLT 380 (547)
Q Consensus 316 e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~-~g~D~vmLs 380 (547)
.-|++.+...++ . ..|+..|++.-=+ ++ ..+...+. -|++.+-+|
T Consensus 193 ~~Gl~~Lk~Lv~----~--a~~rI~ImaGGGV-~~-------------~Ni~~l~~~tG~~~~H~S 238 (287)
T 3iwp_A 193 LEGLPLIKRLIE----Q--AKGRIVVMPGGGI-TD-------------RNLQRILEGSGATEFHCS 238 (287)
T ss_dssp TTTHHHHHHHHH----H--HTTSSEEEECTTC-CT-------------TTHHHHHHHHCCSEEEEC
T ss_pred HHhHHHHHHHHH----H--hCCCCEEEECCCc-CH-------------HHHHHHHHhhCCCEEeEC
Confidence 556555544433 2 2344445443322 22 22333333 599999999
No 345
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=42.50 E-value=1.5e+02 Score=29.41 Aligned_cols=80 Identities=14% Similarity=0.120 Sum_probs=49.2
Q ss_pred cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcC-CcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCC
Q psy6272 303 SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQG-KPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQ 381 (547)
Q Consensus 303 ~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~g-KPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk 381 (547)
+|.||--....|-..|+.. +...+.+.+. ..+ .|||++.. +. .-+|++.+...|+|+|++.
T Consensus 146 ~~aVmPlg~pIGsG~Gi~~-~~~L~~i~~~--~~~~vPVI~~GG---------I~-----tpsDAa~AmeLGAdgVlVg- 207 (268)
T 2htm_A 146 TATVMPLAAPIGSGWGVRT-RALLELFARE--KASLPPVVVDAG---------LG-----LPSHAAEVMELGLDAVLVN- 207 (268)
T ss_dssp CSCBEEBSSSTTTCCCSTT-HHHHHHHHHT--TTTSSCBEEESC---------CC-----SHHHHHHHHHTTCCEEEES-
T ss_pred CCEEEecCccCcCCcccCC-HHHHHHHHHh--cCCCCeEEEeCC---------CC-----CHHHHHHHHHcCCCEEEEC-
Confidence 5666654444555555543 2222223221 235 89999765 21 2289999999999999998
Q ss_pred cchHH----HHHHHHHHHHHHhhhh
Q psy6272 382 SEQAH----HRVDILKEILKKTESV 402 (547)
Q Consensus 382 ~Eta~----eaV~~m~~I~~~aE~~ 402 (547)
|++ .-+++...+...+|+-
T Consensus 208 --SAI~~a~dP~~ma~af~~Av~ag 230 (268)
T 2htm_A 208 --TAIAEAQDPPAMAEAFRLAVEAG 230 (268)
T ss_dssp --HHHHTSSSHHHHHHHHHHHHHHH
T ss_pred --hHHhCCCCHHHHHHHHHHHHHHH
Confidence 455 3466667777777763
No 346
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=42.46 E-value=37 Score=34.18 Aligned_cols=68 Identities=16% Similarity=0.131 Sum_probs=48.2
Q ss_pred HHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEE----EecCHHHHhhHHHHHhh-cCEEEEcCCcccccCC
Q psy6272 244 VVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILA----KIETLLGMEYMDEIIME-SDGVVLNRIQLAVATS 318 (547)
Q Consensus 244 di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~Iia----kIEt~~av~nldeIl~~-~DgImIargDLg~e~~ 318 (547)
....|.+.|+|+|-.||. .+.++++.+. ..+.|++ +-...+.++++.+.+.. ++|+.+||.=+.-+-|
T Consensus 194 aariA~elGAD~VKt~~t--~e~~~~vv~~-----~~vPVv~~GG~~~~~~~~l~~v~~ai~aGA~Gv~vGRnI~q~~dp 266 (295)
T 3glc_A 194 ATRIAAEMGAQIIKTYYV--EKGFERIVAG-----CPVPIVIAGGKKLPEREALEMCWQAIDQGASGVDMGRNIFQSDHP 266 (295)
T ss_dssp HHHHHHHTTCSEEEEECC--TTTHHHHHHT-----CSSCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEESHHHHTSSSH
T ss_pred HHHHHHHhCCCEEEeCCC--HHHHHHHHHh-----CCCcEEEEECCCCCHHHHHHHHHHHHHhCCeEEEeHHHHhcCcCH
Confidence 557889999999999986 3555555442 2355554 23456778888888877 7999999987665533
No 347
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=42.03 E-value=57 Score=32.64 Aligned_cols=72 Identities=19% Similarity=0.263 Sum_probs=43.4
Q ss_pred CChhhHHH-HHHHHHcCCcEEEEcccC------------------Ch--------hhHHHHHHHHHhcCCCceEEE--Ee
Q psy6272 237 IADRDKHV-VDLIVREAVDIIIMSSVT------------------GA--------NSIREMRGMLEDHVDRVLILA--KI 287 (547)
Q Consensus 237 lt~~D~~d-i~~~~~~g~d~I~~sfV~------------------sa--------~di~~~r~~l~~~~~~i~Iia--kI 287 (547)
++..|... .+.+.+.|+|+|.++.-. +. +.+.++++.+ +.++.||+ -|
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~---~~~ipVi~~GGI 298 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLEL---NGRLPIIGVGGI 298 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHH---TTSSCEEEESSC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHh---CCCCCEEEECCC
Confidence 56566433 567888999999987321 11 2233344333 34677777 57
Q ss_pred cCHHHHhhHHHHHhhcCEEEEcCCcc
Q psy6272 288 ETLLGMEYMDEIIMESDGVVLNRIQL 313 (547)
Q Consensus 288 Et~~av~nldeIl~~~DgImIargDL 313 (547)
-|.+-+... |..=+|+|++||+=|
T Consensus 299 ~~~~da~~~--l~~GAd~V~igr~~l 322 (336)
T 1f76_A 299 DSVIAAREK--IAAGASLVQIYSGFI 322 (336)
T ss_dssp CSHHHHHHH--HHHTCSEEEESHHHH
T ss_pred CCHHHHHHH--HHCCCCEEEeeHHHH
Confidence 666554433 222389999999755
No 348
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=42.02 E-value=74 Score=30.64 Aligned_cols=67 Identities=15% Similarity=0.172 Sum_probs=47.3
Q ss_pred hHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 266 SIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 266 di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-++.+++.+.+.+.++.|-+.-+... -+|+++++.-+|.|+-+-.++ .....+-+.|+++|+|++.+
T Consensus 83 Ka~~~~~~l~~~np~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d~~----------~~r~~l~~~~~~~~~p~i~~ 149 (251)
T 1zud_1 83 KSQVSQQRLTQLNPDIQLTALQQRLT-GEALKDAVARADVVLDCTDNM----------ATRQEINAACVALNTPLITA 149 (251)
T ss_dssp HHHHHHHHHHHHCTTSEEEEECSCCC-HHHHHHHHHHCSEEEECCSSH----------HHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEEeccCC-HHHHHHHHhcCCEEEECCCCH----------HHHHHHHHHHHHhCCCEEEE
Confidence 45666777777777777666433222 268889998899998874432 24566888999999999875
No 349
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=41.93 E-value=1.5e+02 Score=29.52 Aligned_cols=83 Identities=10% Similarity=0.072 Sum_probs=53.3
Q ss_pred cCEEEEcCCccc--ccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEee
Q psy6272 303 SDGVVLNRIQLA--VATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVL 379 (547)
Q Consensus 303 ~DgImIargDLg--~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmL 379 (547)
+|||++. |=-| ..+..++-..+-+.+++.+ -..|||..|. ..+-+|. -+.+ .|-..|+|++|+
T Consensus 43 v~Gl~v~-GtTGE~~~Lt~~Er~~v~~~~v~~~--grvpViaGvg---~~~t~~a--------i~la~~A~~~Gadavlv 108 (313)
T 3dz1_A 43 CEGVTVL-GILGEAPKLDAAEAEAVATRFIKRA--KSMQVIVGVS---APGFAAM--------RRLARLSMDAGAAGVMI 108 (313)
T ss_dssp CSEEEES-TGGGTGGGSCHHHHHHHHHHHHHHC--TTSEEEEECC---CSSHHHH--------HHHHHHHHHHTCSEEEE
T ss_pred CCEEEeC-ccCcChhhCCHHHHHHHHHHHHHHc--CCCcEEEecC---CCCHHHH--------HHHHHHHHHcCCCEEEE
Confidence 6999986 3222 3344444444444455555 4689998776 4555555 3333 445569999999
Q ss_pred CCcchHH----HHHHHHHHHHHHhh
Q psy6272 380 TQSEQAH----HRVDILKEILKKTE 400 (547)
Q Consensus 380 sk~Eta~----eaV~~m~~I~~~aE 400 (547)
. .+.-. +.++....|+..+.
T Consensus 109 ~-~P~~~~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 109 A-PPPSLRTDEQITTYFRQATEAIG 132 (313)
T ss_dssp C-CCTTCCSHHHHHHHHHHHHHHHC
T ss_pred C-CCCCCCCHHHHHHHHHHHHHhCC
Confidence 7 66522 88888888888876
No 350
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=41.65 E-value=41 Score=33.28 Aligned_cols=64 Identities=16% Similarity=0.228 Sum_probs=47.9
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEE--ecCHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAK--IETLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~Iiak--IEt~~av~nldeIl~~-~DgImIar 310 (547)
.+.+..+++.|+|+|.++. -++++++++++.+.....+++|.|= | -.+|+.++++. +|+|-+|.
T Consensus 192 lee~~~A~~aGaD~I~ld~-~~~~~l~~~v~~l~~~~~~~~i~AsGGI----~~~ni~~~~~aGaD~i~vGs 258 (273)
T 2b7n_A 192 FEEAKNAMNAGADIVMCDN-LSVLETKEIAAYRDAHYPFVLLEASGNI----SLESINAYAKSGVDAISVGA 258 (273)
T ss_dssp HHHHHHHHHHTCSEEEEET-CCHHHHHHHHHHHHHHCTTCEEEEESSC----CTTTHHHHHTTTCSEEECTH
T ss_pred HHHHHHHHHcCCCEEEECC-CCHHHHHHHHHHhhccCCCcEEEEECCC----CHHHHHHHHHcCCcEEEEcH
Confidence 3557788899999999987 4688999888888654445666542 3 24688888887 79988874
No 351
>1vpz_A Carbon storage regulator homolog; CSRA-like fold, structural genomics, joint center for struct genomics, JCSG; HET: MSE; 2.05A {Pseudomonas aeruginosa} SCOP: b.151.1.1
Probab=41.63 E-value=37 Score=27.35 Aligned_cols=33 Identities=15% Similarity=0.215 Sum_probs=27.0
Q ss_pred cccccCCCCEEEEeceeEEEEEEEeCCeEEEEE
Q psy6272 181 LPKRVIPDDIVYIDRNIKLKVVEKENNDVHCTV 213 (547)
Q Consensus 181 ~~~~v~~Gd~I~idD~I~l~V~~v~~~~v~~~V 213 (547)
|.-.=++|+.|.|+|.|..+|.++.++.|..=+
T Consensus 14 LvLtRK~GEsI~IGddI~ItVl~i~g~qVrLGI 46 (73)
T 1vpz_A 14 LILTRRVGETLMVGDDVTVTVLGVKGNQVRIGV 46 (73)
T ss_dssp EEEEEETTCEEEETTTEEEEEEEEETTEEEEEE
T ss_pred EEEEccCCCEEEeCCCEEEEEEEEeCCEEEEEE
Confidence 344458999999999999999999999886533
No 352
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=41.61 E-value=1.7e+02 Score=27.56 Aligned_cols=111 Identities=10% Similarity=0.018 Sum_probs=63.2
Q ss_pred hHHHHHHHHHcCCcEEEEccc-CChhhH--HHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh--cCEEEEcCCcccc
Q psy6272 241 DKHVVDLIVREAVDIIIMSSV-TGANSI--REMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME--SDGVVLNRIQLAV 315 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sfV-~sa~di--~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~--~DgImIargDLg~ 315 (547)
+.+|+..+.+.|+|++.+-|. .|+..+ +.++++.......+..+.=.-+ +..+.+.+|+.. .|.|=+- ||-.
T Consensus 11 ~~eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn-~~~~~i~~~~~~~~ld~vQLH-G~e~- 87 (205)
T 1nsj_A 11 NLEDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPFVFRVGVFVN-EEPEKILDVASYVQLNAVQLH-GEEP- 87 (205)
T ss_dssp SHHHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESS-CCHHHHHHHHHHHTCSEEEEC-SCCC-
T ss_pred cHHHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeC-CCHHHHHHHHHhhCCCEEEEC-CCCC-
Confidence 577899999999999999975 455433 5555555443334443333222 235566666665 4888886 5532
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 316 ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 316 e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
.+.+... + .+.|++-+-.+ . +- .|+..+....+|.++|.
T Consensus 88 ---~~~~~~l--------~-~~~~vika~~v---~---~~--------~~l~~~~~~~~d~~LlD 126 (205)
T 1nsj_A 88 ---IELCRKI--------A-ERILVIKAVGV---S---NE--------RDMERALNYREFPILLD 126 (205)
T ss_dssp ---HHHHHHH--------H-TTSEEEEEEEE---S---SH--------HHHHHHGGGTTSCEEEE
T ss_pred ---HHHHHHH--------h-cCCCEEEEEEc---C---CH--------HHHHHHHHcCCCEEEEC
Confidence 2222111 1 15888865331 1 12 44444444448999986
No 353
>1vhk_A Hypothetical protein YQEU; structural genomics, unknown function; 2.60A {Bacillus subtilis} SCOP: b.122.1.2 c.116.1.5
Probab=41.52 E-value=1.7e+02 Score=28.68 Aligned_cols=121 Identities=12% Similarity=0.123 Sum_probs=64.2
Q ss_pred cccCCCCEEEEec----eeEEEEEEEeCCeEEEEEEeCcEeCCCc--eeeeCCCCcCCCCCChhhHHHHHHHHHcCCcEE
Q psy6272 183 KRVIPDDIVYIDR----NIKLKVVEKENNDVHCTVIRGGKLMDNQ--LVTVPRVTFNLPVIADRDKHVVDLIVREAVDII 256 (547)
Q Consensus 183 ~~v~~Gd~I~idD----~I~l~V~~v~~~~v~~~V~~gG~L~s~K--ginlp~~~~~lp~lt~~D~~di~~~~~~g~d~I 256 (547)
-.+++||.|.+-| .-..+|.+++++.+.+++..--...... .|.| .+-+|. .++....|+.+.+.|++-|
T Consensus 35 LRl~~Gd~i~l~dg~G~~~~a~I~~~~~~~~~~~i~~~~~~~~e~~~~v~L---~~al~K-~~r~e~ilqkatELGV~~I 110 (268)
T 1vhk_A 35 MRMNEGDQIICCSQDGFEAKCELQSVSKDKVSCLVIEWTNENRELPIKVYI---ASGLPK-GDKLEWIIQKGTELGAHAF 110 (268)
T ss_dssp TCCCTTCEEEEECTTSCEEEEEEEEECSSEEEEEEEEECCCCCCCSSEEEE---EEECCS-TTHHHHHHHHHHHTTCCEE
T ss_pred hcCCCCCEEEEEeCCCCEEEEEEEEecCCEEEEEEEEEeccCCCCCccEEE---EEeeec-CccHHHHHHHHHHhCcCEE
Confidence 4578999998755 6667888999999888886421111111 1111 223333 2344446789999999965
Q ss_pred EEccc-CCh---------hhHHHHHHHH----HhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEc
Q psy6272 257 IMSSV-TGA---------NSIREMRGML----EDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLN 309 (547)
Q Consensus 257 ~~sfV-~sa---------~di~~~r~~l----~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIa 309 (547)
..=+- ++- ...++.++.+ ++.+. ..+.+|+.+..++.+-+-....|..++.
T Consensus 111 ~p~~s~Rsv~~~~~~~~~kk~~Rw~~i~~eAaeQs~R--~~iP~v~~~~~~~~~l~~~~~~~~~lv~ 175 (268)
T 1vhk_A 111 IPFQAARSVVKLDDKKAKKKRERWTKIAKEAAEQSYR--NEVPRVMDVHSFQQLLQRMQDFDKCVVA 175 (268)
T ss_dssp EEECCTTCCCC---------HHHHHHHHHHHHHHTTC--SSCCEECCCBCHHHHHHHGGGSSEEEEE
T ss_pred EEEEeeeeeeecccchhhhHHHHHHHHHHHHHHHcCC--CCCcEEecCCCHHHHHhhCccCCeEEEE
Confidence 43322 221 1244544444 44443 2345666554444432222222555554
No 354
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=41.40 E-value=30 Score=34.64 Aligned_cols=65 Identities=15% Similarity=0.218 Sum_probs=49.1
Q ss_pred hHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHH--HhhHHHHHhh-cCEEEEcC
Q psy6272 241 DKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLG--MEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~a--v~nldeIl~~-~DgImIar 310 (547)
+.+.+..+++.|+|+|++... ++++++++.+.+...+.++++.| --| .+|+.++.+. +|+|-+|.
T Consensus 202 tleea~eA~~aGaD~I~LDn~-~~e~l~~av~~l~~~~~~v~ieA----SGGIt~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 202 NLEDALRAVEAGADIVMLDNL-SPEEVKDISRRIKDINPNVIVEV----SGGITEENVSLYDFETVDVISSSR 269 (285)
T ss_dssp SHHHHHHHHHTTCSEEEEESC-CHHHHHHHHHHHHHHCTTSEEEE----EECCCTTTGGGGCCTTCCEEEEGG
T ss_pred CHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhhccCCCceEEE----ECCCCHHHHHHHHHcCCCEEEEeH
Confidence 467788899999999999984 78899999888865444555443 222 4677777777 79999986
No 355
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=41.40 E-value=88 Score=30.74 Aligned_cols=97 Identities=10% Similarity=0.071 Sum_probs=54.0
Q ss_pred ChhhHHH-HHHHHHcCCcEEEEcccC-------------------------Ch----hhHHHHHHHHHhcCCCceEEE--
Q psy6272 238 ADRDKHV-VDLIVREAVDIIIMSSVT-------------------------GA----NSIREMRGMLEDHVDRVLILA-- 285 (547)
Q Consensus 238 t~~D~~d-i~~~~~~g~d~I~~sfV~-------------------------sa----~di~~~r~~l~~~~~~i~Iia-- 285 (547)
+..+... .+.+.+.|+|+|.++--. .. ..++.+++.-+..+.++.||+
T Consensus 170 ~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~G 249 (311)
T 1jub_A 170 DLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTG 249 (311)
T ss_dssp SHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEES
T ss_pred CHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEEC
Confidence 4445444 467778999999886421 00 123444443333334678877
Q ss_pred EecCHHHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCC
Q psy6272 286 KIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGK 338 (547)
Q Consensus 286 kIEt~~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gK 338 (547)
-|.|.+-+..+ |..-+|+|++||+=|. -++.-+..+.+.+-....+.|.
T Consensus 250 GI~~~~da~~~--l~~GAd~V~vg~~~l~--~~p~~~~~i~~~l~~~l~~~g~ 298 (311)
T 1jub_A 250 GIETGQDAFEH--LLCGATMLQIGTALHK--EGPAIFDRIIKELEEIMNQKGY 298 (311)
T ss_dssp SCCSHHHHHHH--HHHTCSEEEECHHHHH--HCTHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCHHHHHHH--HHcCCCEEEEchHHHh--cCcHHHHHHHHHHHHHHHHcCC
Confidence 36555433322 2223899999998664 1233444555555555666664
No 356
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=41.33 E-value=40 Score=32.29 Aligned_cols=87 Identities=13% Similarity=0.170 Sum_probs=56.4
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccccCChH
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAVATSVE 320 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~e~~~e 320 (547)
....+.+.+.|+|++.+|- ..++++..+|+.+. .-+.+..-|= +++ .+..+.++. +|.++|||+=...+=|.+
T Consensus 125 ~~~a~~a~~~g~~GvV~sa-t~p~e~~~ir~~~~---~~~~vtPGI~-~~g-~tp~~a~~~Gad~iVVGR~I~~A~dP~~ 198 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGG-TKLDHITQYRRDFE---KMTIVSPGMG-SQG-GSYGDAVCAGADYEIIGRSIYNAGNPLT 198 (222)
T ss_dssp HHHHHHHHHHCCSEEEECT-TCHHHHHHHHHHCT---TCEEEECCBS-TTS-BCTTHHHHHTCSEEEECHHHHTSSSHHH
T ss_pred HHHHHHHHHhCCCEEEECC-CCHHHHHHHHHhCC---CCEEEcCCcc-cCc-cCHHHHHHcCCCEEEECHHhcCCCCHHH
Confidence 5566788899999998874 44688888888764 2222333342 222 145454544 899999999888877766
Q ss_pred HHHHHHHHHHHHHH
Q psy6272 321 VTFLAQKMIAARCN 334 (547)
Q Consensus 321 ~v~~~qk~ii~~c~ 334 (547)
....++++|-+..+
T Consensus 199 aa~~i~~~i~~~~~ 212 (222)
T 4dbe_A 199 ALRTINKIIEDKVM 212 (222)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 55555555544433
No 357
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=41.28 E-value=31 Score=31.41 Aligned_cols=62 Identities=18% Similarity=0.184 Sum_probs=45.3
Q ss_pred EEEecCCEEEEee--ccccccCCCccEEEecCCCccc---ccCCCCEEEEeceeEEEEEEEeCCeEEE
Q psy6272 149 VEIAQGANIVLTA--NQLIETKGTVKRLFVDSMELPK---RVIPDDIVYIDRNIKLKVVEKENNDVHC 211 (547)
Q Consensus 149 i~L~~G~~v~lt~--~~~~~~~~~~~~i~v~~~~~~~---~v~~Gd~I~idD~I~l~V~~v~~~~v~~ 211 (547)
.-.+.|++.+++. +..|+..+......++...|.. .+++|+.+.++.. ..+|.+++++.|+.
T Consensus 62 ~gm~~Ge~~~v~Ipp~~aYG~~~~~~V~~v~~~~f~~~~~~~~~G~~~~~~~~-~~~V~~v~~~~V~v 128 (157)
T 3pr9_A 62 LEMDVGEEREVVLPPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDGI-PGKIVSINSGRVLV 128 (157)
T ss_dssp HHCCTTCEEEEEECGGGTTCCCCGGGEEEEEHHHHHHTTCCCCTTCEEEETTE-EEEEEEEETTEEEE
T ss_pred cCCCCCCEEEEEECcHHhcCCCChHhEEEcCHHHCCcccCCcCCCcEEEecCC-CeEEEEEcCCEEEE
Confidence 3467889888875 4567777777777777666654 2577999999873 25799999987643
No 358
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=41.23 E-value=51 Score=34.23 Aligned_cols=118 Identities=11% Similarity=-0.053 Sum_probs=69.2
Q ss_pred HHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHhhhhhhhHHH
Q psy6272 329 IAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQV 408 (547)
Q Consensus 329 ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~aE~~~~~~~~ 408 (547)
+...|+..|.++.+. .|..... .-+...-..|++.+++..+.+..++++...+++++- ..++
T Consensus 160 lA~aaa~~Gl~~~iv-----mp~~~~~--------~k~~~~~~~GAeVv~~v~~~~~~da~~~a~~~~~~~-g~~~---- 221 (389)
T 1wkv_A 160 LSAVARLYGYRARVY-----LPGAAEE--------FGKLLPRLLGAQVIVDPEAPSTVHLLPRVMKDSKNE-GFVH---- 221 (389)
T ss_dssp HHHHHHHTTCEEEEE-----EETTSCH--------HHHHHHHHTTCEEEEETTCSSSGGGHHHHHHHHHHH-CCEE----
T ss_pred HHHHHHHcCCeEEEE-----ECCCCCH--------HHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHcc-CcEe----
Confidence 567789999999875 3332222 344556678999883431344445655544444332 1111
Q ss_pred HHHhhhcCCCCCChhhHHH---HHHHHHHHhc-----CCcEEEEEcCCchHHHHHHh----cCCCCCEEEEeCch
Q psy6272 409 FEDLCALACPPLDPAHSIV---IACVNAALKC-----QAVAIIVITCSGYSAKLVSK----YRPQCPILAVSSLG 471 (547)
Q Consensus 409 f~~~~~~~~~~~~~~~~ia---~aav~~a~~~-----~a~aIvv~T~sG~tA~~isk----~RP~~pIiavt~~~ 471 (547)
..+..++...++ ..+.|+..++ ..++||+.+-+|.++.-+++ ..|.+.|++|.+..
T Consensus 222 -------~~p~~N~~~~~~~~~t~g~Ei~~Q~~~~g~~~D~vv~~vG~GG~~~Gi~~~~k~~~p~vrvigVe~~~ 289 (389)
T 1wkv_A 222 -------VNQFYNDANFEAHMRGTAREIFVQSRRGGLALRGVAGSLGTSGHMSAAAFYLQSVDPSIRAVLVQPAQ 289 (389)
T ss_dssp -------CCTTTCHHHHHHHHHTHHHHHHHHHHHTTCCEEEEEECCSSSHHHHHHHHHHHHHCTTCEEEEEEECT
T ss_pred -------cCcCCChHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCchHhHHHHHHHHHHhCCCCeEEEEecCC
Confidence 011111222222 1234555544 46899999999999886654 37999999999864
No 359
>3dzv_A 4-methyl-5-(beta-hydroxyethyl)thiazole kinase; NP_816404.1, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.57A {Enterococcus faecalis}
Probab=40.93 E-value=44 Score=33.15 Aligned_cols=46 Identities=13% Similarity=0.085 Sum_probs=35.5
Q ss_pred HHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEE
Q psy6272 292 GMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 292 av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~ 342 (547)
+.+.+.|+++.+|++.|+.|=|. ++........++.++++++|+++
T Consensus 48 ~~~e~~e~~~~a~alvIn~G~l~-----~~~~~~~~~a~~~a~~~~~PvVl 93 (273)
T 3dzv_A 48 DPREFPQMFQQTSALVLNLGHLS-----QEREQSLLAASDYARQVNKLTVV 93 (273)
T ss_dssp CGGGHHHHHTTCSEEEEECCSCC-----HHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHCCeEEEecCCCC-----hHHHHHHHHHHHHHHHcCCcEEE
Confidence 35678888999999999999764 23334445577789999999998
No 360
>3fdx_A Putative filament protein / universal stress PROT; structural genomics, APC60640.1, universal protein F, PSI-2; HET: MSE ATP; 1.58A {Klebsiella pneumoniae subsp} PDB: 3fh0_A*
Probab=40.62 E-value=46 Score=27.87 Aligned_cols=42 Identities=24% Similarity=0.242 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcC--------CchHHHHHHhcCCCCCEEEE
Q psy6272 425 SIVIACVNAALKCQAVAIIVITC--------SGYSAKLVSKYRPQCPILAV 467 (547)
Q Consensus 425 ~ia~aav~~a~~~~a~aIvv~T~--------sG~tA~~isk~RP~~pIiav 467 (547)
..+...++.|.+.+++.||+-++ -|.++..+.+.= +||++.|
T Consensus 93 ~~~~~I~~~a~~~~~dliV~G~~~~~~~~~~~Gs~~~~v~~~~-~~pVlvv 142 (143)
T 3fdx_A 93 SPKDKILALAKSLPADLVIIASHRPDITTYLLGSNAAAVVRHA-ECSVLVV 142 (143)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESSCTTCCSCSSCHHHHHHHHHC-SSEEEEE
T ss_pred ChHHHHHHHHHHhCCCEEEEeCCCCCCeeeeeccHHHHHHHhC-CCCEEEe
Confidence 35566777888999999999875 367788887754 5999876
No 361
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=40.44 E-value=2.1e+02 Score=25.91 Aligned_cols=104 Identities=13% Similarity=0.109 Sum_probs=59.7
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccccCChH
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAVATSVE 320 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~e~~~e 320 (547)
.+.++.+.+.|+|+| ++..-+.+-+ ++..+. .+.+++.+-|.+-+. .-+.. +|.|-+-++.+. +++
T Consensus 73 ~~~~~~a~~~Gad~i-v~~~~~~~~~----~~~~~~--g~~vi~g~~t~~e~~---~a~~~Gad~vk~~~~~~~---g~~ 139 (205)
T 1wa3_A 73 VEQCRKAVESGAEFI-VSPHLDEEIS----QFCKEK--GVFYMPGVMTPTELV---KAMKLGHTILKLFPGEVV---GPQ 139 (205)
T ss_dssp HHHHHHHHHHTCSEE-ECSSCCHHHH----HHHHHH--TCEEECEECSHHHHH---HHHHTTCCEEEETTHHHH---HHH
T ss_pred HHHHHHHHHcCCCEE-EcCCCCHHHH----HHHHHc--CCcEECCcCCHHHHH---HHHHcCCCEEEEcCcccc---CHH
Confidence 445788899999999 5544444333 333332 467777665654222 22222 688877553321 221
Q ss_pred HHHHHHHHHHHHHHHc-CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 321 VTFLAQKMIAARCNKQ-GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 321 ~v~~~qk~ii~~c~~~-gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
. +-+.+... +.|++....+ + . .++..+...|+|++.+.
T Consensus 140 ~-------~~~l~~~~~~~pvia~GGI----~---~--------~~~~~~~~~Ga~~v~vG 178 (205)
T 1wa3_A 140 F-------VKAMKGPFPNVKFVPTGGV----N---L--------DNVCEWFKAGVLAVGVG 178 (205)
T ss_dssp H-------HHHHHTTCTTCEEEEBSSC----C---T--------TTHHHHHHHTCSCEEEC
T ss_pred H-------HHHHHHhCCCCcEEEcCCC----C---H--------HHHHHHHHCCCCEEEEC
Confidence 1 11222334 7898887653 1 2 45666778899999997
No 362
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=40.34 E-value=43 Score=28.12 Aligned_cols=42 Identities=14% Similarity=0.192 Sum_probs=32.8
Q ss_pred HHHHHHHH-HHHhcCCcEEEEEcC---------CchHHHHHHhcCCCCCEEEE
Q psy6272 425 SIVIACVN-AALKCQAVAIIVITC---------SGYSAKLVSKYRPQCPILAV 467 (547)
Q Consensus 425 ~ia~aav~-~a~~~~a~aIvv~T~---------sG~tA~~isk~RP~~pIiav 467 (547)
..+...++ .|.+.+++.||+-+. -|.++..+.+.-| |||+.|
T Consensus 94 ~~~~~I~~~~a~~~~~dliV~G~~~~~~~~~~~~Gs~~~~vl~~~~-~pVlvV 145 (146)
T 3s3t_A 94 IPKHTIEDYAKQHPEIDLIVLGATGTNSPHRVAVGSTTSYVVDHAP-CNVIVI 145 (146)
T ss_dssp CHHHHHHHHHHHSTTCCEEEEESCCSSCTTTCSSCHHHHHHHHHCS-SEEEEE
T ss_pred ChHHHHHHHHHhhcCCCEEEECCCCCCCcceEEEcchHHHHhccCC-CCEEEe
Confidence 35667777 788899999998875 3678888887765 999876
No 363
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=40.33 E-value=66 Score=32.71 Aligned_cols=66 Identities=12% Similarity=0.049 Sum_probs=49.6
Q ss_pred hHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 266 SIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 266 di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
-++.+.+.|.+.|..+.+-+.-+.... +.++++.-.|.|+.+-.+ ...+..+-+.|+++++|++.+
T Consensus 91 Ka~~~~~~l~~lnp~v~v~~~~~~~~~--~~~~~~~~~dvVv~~~d~----------~~~r~~ln~~~~~~~ip~i~~ 156 (346)
T 1y8q_A 91 RAEASLERAQNLNPMVDVKVDTEDIEK--KPESFFTQFDAVCLTCCS----------RDVIVKVDQICHKNSIKFFTG 156 (346)
T ss_dssp HHHHHHHHHHHTCTTSEEEEECSCGGG--CCHHHHTTCSEEEEESCC----------HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHhHCCCeEEEEEecccCc--chHHHhcCCCEEEEcCCC----------HHHHHHHHHHHHHcCCCEEEE
Confidence 466677778888888887776555443 567888888999887443 245667889999999999975
No 364
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=40.29 E-value=3.2e+02 Score=29.06 Aligned_cols=122 Identities=8% Similarity=0.034 Sum_probs=65.9
Q ss_pred HHHHHHHHHcCCcEEEEc-ccCChhhHHHHHHHHHhcCCCceEEEEec-----CHH-HHhhHHHHHhh-cCEEEEcCCcc
Q psy6272 242 KHVVDLIVREAVDIIIMS-SVTGANSIREMRGMLEDHVDRVLILAKIE-----TLL-GMEYMDEIIME-SDGVVLNRIQL 313 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s-fV~sa~di~~~r~~l~~~~~~i~IiakIE-----t~~-av~nldeIl~~-~DgImIargDL 313 (547)
..+++.++++|+|.|.+. .++..+.+....+++.+.|..+..-...+ +.+ .++-++++.+. +|.|-++ |=
T Consensus 103 ~~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad~I~l~--DT 180 (464)
T 2nx9_A 103 DTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELGVDSIALK--DM 180 (464)
T ss_dssp HHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTTCSEEEEE--ET
T ss_pred HHHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCCEEEEc--CC
Confidence 567899999999988765 34445566666666777776544333222 222 22233333333 4766554 42
Q ss_pred cccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEee
Q psy6272 314 AVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVL 379 (547)
Q Consensus 314 g~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmL 379 (547)
.--+-+..+...-+.+. +..+.|+.+.|+ +-.=--+ .-...|+..|+|.|=-
T Consensus 181 ~G~~~P~~v~~lv~~l~---~~~~~~i~~H~H---nd~GlAv--------AN~laAv~AGa~~VD~ 232 (464)
T 2nx9_A 181 AGILTPYAAEELVSTLK---KQVDVELHLHCH---STAGLAD--------MTLLKAIEAGVDRVDT 232 (464)
T ss_dssp TSCCCHHHHHHHHHHHH---HHCCSCEEEEEC---CTTSCHH--------HHHHHHHHTTCSEEEE
T ss_pred CCCcCHHHHHHHHHHHH---HhcCCeEEEEEC---CCCChHH--------HHHHHHHHhCCCEEEE
Confidence 22222334444333333 234899999886 2221112 3344677888876643
No 365
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=40.12 E-value=53 Score=28.54 Aligned_cols=46 Identities=17% Similarity=0.115 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhcCCCCCEEEEeCch
Q psy6272 425 SIVIACVNAALKCQAVAIIVITC---------SGYSAKLVSKYRPQCPILAVSSLG 471 (547)
Q Consensus 425 ~ia~aav~~a~~~~a~aIvv~T~---------sG~tA~~isk~RP~~pIiavt~~~ 471 (547)
..+...++.|.+.+++.||+-+. -|.++..+.+.- .|||+.|-+..
T Consensus 104 ~~~~~I~~~a~~~~~DlIV~G~~g~~~~~~~~~Gsv~~~vl~~~-~~PVlvv~~~~ 158 (170)
T 2dum_A 104 IPWDEIVKVAEEENVSLIILPSRGKLSLSHEFLGSTVMRVLRKT-KKPVLIIKEVD 158 (170)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESCCCCC--TTCCCHHHHHHHHHC-SSCEEEECCCC
T ss_pred ChHHHHHHHHHHcCCCEEEECCCCCCccccceechHHHHHHHhC-CCCEEEEccCC
Confidence 35667778888999999998876 256777777775 49999986543
No 366
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=40.11 E-value=2.2e+02 Score=28.39 Aligned_cols=105 Identities=14% Similarity=0.134 Sum_probs=70.4
Q ss_pred HcCCcEEEEcccCC--------------hhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccc
Q psy6272 250 REAVDIIIMSSVTG--------------ANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAV 315 (547)
Q Consensus 250 ~~g~d~I~~sfV~s--------------a~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg~ 315 (547)
+.+..+|+-++.+. .+.++.++++.++. .+.+++-+-..+.++-+. +.+|.+-||-+++--
T Consensus 49 ~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L~~~~~e~--Glp~~Tev~d~~~v~~l~---~~vd~lqIgA~~~~n 123 (285)
T 3sz8_A 49 KLGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIFAEVKARF--GVPVITDVHEAEQAAPVA---EIADVLQVPAFLARQ 123 (285)
T ss_dssp HHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHH--CCCEEEECCSGGGHHHHH---TTCSEEEECGGGTTC
T ss_pred hheeeeEEEeecccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHH---HhCCEEEECccccCC
Confidence 45788888864442 35677777777654 577888888777776654 459999999766652
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHH-hCccEEeeC
Q psy6272 316 ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQ-DGADVVVLT 380 (547)
Q Consensus 316 e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~-~g~D~vmLs 380 (547)
.+ +++.+-+.||||++.|.|. .|-.|+ ..++..+. .|.+-++|-
T Consensus 124 ------~~-----LLr~va~~gkPVilK~G~~--~t~~ei--------~~ave~i~~~Gn~~i~L~ 168 (285)
T 3sz8_A 124 ------TD-----LVVAIAKAGKPVNVKKPQF--MSPTQL--------KHVVSKCGEVGNDRVMLC 168 (285)
T ss_dssp ------HH-----HHHHHHHTSSCEEEECCTT--SCGGGT--------HHHHHHHHHTTCCCEEEE
T ss_pred ------HH-----HHHHHHccCCcEEEeCCCC--CCHHHH--------HHHHHHHHHcCCCcEEEE
Confidence 22 4445557899999999863 234455 66666554 477666664
No 367
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=40.01 E-value=45 Score=36.84 Aligned_cols=131 Identities=14% Similarity=0.138 Sum_probs=66.7
Q ss_pred CCChhhHHHH--------HHHHHcCCcEEEEccc--------------CChh------------hHHHHHHHH-HhcCCC
Q psy6272 236 VIADRDKHVV--------DLIVREAVDIIIMSSV--------------TGAN------------SIREMRGML-EDHVDR 280 (547)
Q Consensus 236 ~lt~~D~~di--------~~~~~~g~d~I~~sfV--------------~sa~------------di~~~r~~l-~~~~~~ 280 (547)
.||..|++.+ ++|.+.|+|+|=+-.- +... -+.++.+.+ +..+.+
T Consensus 145 ~~t~~ei~~~i~~f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yGGs~enR~r~~~ei~~avr~~~g~~ 224 (690)
T 3k30_A 145 AMTKQDIDDLRRWHRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYGGSLENRMRLLRELLEDTLDECAGR 224 (690)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHHHTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccCCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 5788887776 4677899999998221 1111 122222222 223567
Q ss_pred ceEEEEe------cCHHHHhhHHHHHhh----cCEEEEcCCcccccCChHHH--HHHHHHHHHHHH-HcCCcEEEEcCCC
Q psy6272 281 VLILAKI------ETLLGMEYMDEIIME----SDGVVLNRIQLAVATSVEVT--FLAQKMIAARCN-KQGKPFLVVGDIL 347 (547)
Q Consensus 281 i~IiakI------Et~~av~nldeIl~~----~DgImIargDLg~e~~~e~v--~~~qk~ii~~c~-~~gKPvi~aTq~L 347 (547)
..|..|| +.--..++.-++++. .|.+-+.-|.+......... ...+...++..+ ..++|||....+-
T Consensus 225 ~~v~~r~s~~~~~~~g~~~~~~~~~~~~l~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~ 304 (690)
T 3k30_A 225 AAVACRITVEEEIDGGITREDIEGVLRELGELPDLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVGRFT 304 (690)
T ss_dssp SEEEEEEECCCCSTTSCCHHHHHHHHHHHTTSSSEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEECSCCC
T ss_pred ceEEEEECccccCCCCCCHHHHHHHHHHHHhhcCEEEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEEeCCCC
Confidence 7888898 111112233333333 47766665532211000000 001112223333 3589999865532
Q ss_pred CCCCcccccccCccchhhHHHHHHhC-ccEEeeC
Q psy6272 348 PDHNVEEYSDVSIGDMNDVNSIVQDG-ADVVVLT 380 (547)
Q Consensus 348 e~PtraE~~~~~~~~~~Dv~nav~~g-~D~vmLs 380 (547)
+ . .+...++..| +|.|++.
T Consensus 305 -~-----~--------~~a~~~l~~g~~d~v~~g 324 (690)
T 3k30_A 305 -S-----P--------DAMVRQIKAGILDLIGAA 324 (690)
T ss_dssp -C-----H--------HHHHHHHHTTSCSEEEES
T ss_pred -C-----H--------HHHHHHHHCCCcceEEEc
Confidence 1 2 4455678887 9999997
No 368
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=40.00 E-value=92 Score=33.04 Aligned_cols=99 Identities=16% Similarity=0.147 Sum_probs=58.0
Q ss_pred CCChhhHHHH-HHHHHcCCcEEEEcccCCh-h--------------------hHHHHHHHHHhcCCCceEEE--EecCHH
Q psy6272 236 VIADRDKHVV-DLIVREAVDIIIMSSVTGA-N--------------------SIREMRGMLEDHVDRVLILA--KIETLL 291 (547)
Q Consensus 236 ~lt~~D~~di-~~~~~~g~d~I~~sfV~sa-~--------------------di~~~r~~l~~~~~~i~Iia--kIEt~~ 291 (547)
.+++.|..++ +.+.+.|+|+|.++.-... . .++.++..-+..+.++.||+ -|.|.+
T Consensus 307 d~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~ 386 (443)
T 1tv5_A 307 DLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGL 386 (443)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHH
Confidence 3566666555 4667899999999864221 0 12333333333345788887 576665
Q ss_pred HHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCC
Q psy6272 292 GMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGK 338 (547)
Q Consensus 292 av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gK 338 (547)
-.... |..=+|+|+++|+=+.- ++.-+..+.+.+-....+.|.
T Consensus 387 DA~e~--l~aGAd~Vqigrall~~--gP~l~~~i~~~l~~~l~~~G~ 429 (443)
T 1tv5_A 387 DALEK--IEAGASVCQLYSCLVFN--GMKSAVQIKRELNHLLYQRGY 429 (443)
T ss_dssp HHHHH--HHTTEEEEEESHHHHHH--GGGHHHHHHHHHHHHHHHHTC
T ss_pred HHHHH--HHcCCCEEEEcHHHHhc--ChHHHHHHHHHHHHHHHHhCC
Confidence 44322 33338999999996631 333444555555555666664
No 369
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=39.82 E-value=1.5e+02 Score=29.42 Aligned_cols=84 Identities=14% Similarity=0.133 Sum_probs=52.0
Q ss_pred cCEEEEcCCcc--cccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEee
Q psy6272 303 SDGVVLNRIQL--AVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVL 379 (547)
Q Consensus 303 ~DgImIargDL--g~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmL 379 (547)
+|||++. |=- +..+..++-..+-+..++.++ -..||+..+. ..+-.|. -+.+ .|-..|+|++|+
T Consensus 46 v~Gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaGvg---~~~t~~a--------i~la~~A~~~Gadavlv 112 (303)
T 2wkj_A 46 IDGLYVG-GSTGEAFVQSLSEREQVLEIVAEEAK-GKIKLIAHVG---CVSTAES--------QQLAASAKRYGFDAVSA 112 (303)
T ss_dssp CSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEECC---CSSHHHH--------HHHHHHHHHHTCSEEEE
T ss_pred CCEEEEC-eeccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC---CCCHHHH--------HHHHHHHHhCCCCEEEe
Confidence 6999886 322 233444554445554555543 2579998776 4444455 3333 344569999999
Q ss_pred CCcch-----HHHHHHHHHHHHHHhh
Q psy6272 380 TQSEQ-----AHHRVDILKEILKKTE 400 (547)
Q Consensus 380 sk~Et-----a~eaV~~m~~I~~~aE 400 (547)
. .+. --+.++....|+..+.
T Consensus 113 ~-~P~y~~~s~~~l~~~f~~va~a~~ 137 (303)
T 2wkj_A 113 V-TPFYYPFSFEEHCDHYRAIIDSAD 137 (303)
T ss_dssp E-CCCSSCCCHHHHHHHHHHHHHHHT
T ss_pred c-CCCCCCCCHHHHHHHHHHHHHhCC
Confidence 6 443 2377888888887776
No 370
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=39.64 E-value=2.1e+02 Score=28.76 Aligned_cols=41 Identities=15% Similarity=0.318 Sum_probs=33.0
Q ss_pred cchhhHHHHHHhCccEEeeCCcchHH----HHHHHHHHHHHHhhhh
Q psy6272 361 GDMNDVNSIVQDGADVVVLTQSEQAH----HRVDILKEILKKTESV 402 (547)
Q Consensus 361 ~~~~Dv~nav~~g~D~vmLsk~Eta~----eaV~~m~~I~~~aE~~ 402 (547)
..+.+.-+++..|+|.|--. ||.-. |||+-|+.|..++...
T Consensus 123 ~~l~EAlrri~eGA~mIrTt-ge~gtg~v~~av~h~r~~~~~i~~l 167 (291)
T 3o07_A 123 KDLGEALRRINEGAAMIRTK-GEAGTGDVSEAVKHIRRITEEIKAC 167 (291)
T ss_dssp SSHHHHHHHHHHTCSEEEEC-CCTTSCCTHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCEEEec-CcCCCccHHHHHHHHHHHHHHHHHH
Confidence 33477778999999999988 88433 9999999998887653
No 371
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=39.60 E-value=80 Score=30.93 Aligned_cols=120 Identities=10% Similarity=0.085 Sum_probs=60.3
Q ss_pred HHHHHHHHHcCCcEEEEc----c----------cCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEE
Q psy6272 242 KHVVDLIVREAVDIIIMS----S----------VTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGV 306 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~s----f----------V~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgI 306 (547)
.+.++.+.+.|+++|.+. + -++.+.++++++ . -++.++.++--. -.+.++...+. +|+|
T Consensus 31 ~~~a~~~~~~Ga~~i~~~e~v~~~~~~~~G~~~~~~~~~i~~i~~---~--~~~Pvi~~~~~~-~~~~~~~~~~aGad~v 104 (297)
T 2zbt_A 31 PEQAVIAEEAGAVAVMALERVPADIRAQGGVARMSDPKIIKEIMA---A--VSIPVMAKVRIG-HFVEAMILEAIGVDFI 104 (297)
T ss_dssp HHHHHHHHHHTCSEEEECSSCHHHHHHTTCCCCCCCHHHHHHHHT---T--CSSCEEEEEETT-CHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHCCCcEEEeccccchHHHhhcCCccCCCHHHHHHHHH---h--cCCCeEEEeccC-CHHHHHHHHHCCCCEE
Confidence 456677888999999762 1 123333443332 2 245555543211 13445555555 6888
Q ss_pred EEcCCcccccCChHHHHHHHHHHHHHHHHc--CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcch
Q psy6272 307 VLNRIQLAVATSVEVTFLAQKMIAARCNKQ--GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQ 384 (547)
Q Consensus 307 mIargDLg~e~~~e~v~~~qk~ii~~c~~~--gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Et 384 (547)
|.......++ +++.+++. +++++.-+. . . .++..+...|+|.+... |+.
T Consensus 105 -----~~~~~~~~~~-------~~~~~~~~~~~i~l~~~v~---~-----~--------~~~~~a~~~Gad~I~v~-G~~ 155 (297)
T 2zbt_A 105 -----DESEVLTPAD-------EEHHIDKWKFKVPFVCGAR---N-----L--------GEALRRIAEGAAMIRTK-GEA 155 (297)
T ss_dssp -----EEETTSCCSC-------SSCCCCGGGCSSCEEEEES---S-----H--------HHHHHHHHTTCSEEEEC-CCS
T ss_pred -----eeeCCCChHH-------HHHHHHHhCCCceEEeecC---C-----H--------HHHHHHHHcCCCEEEEc-ccc
Confidence 2222111111 22233333 677664211 1 1 34456788899999877 653
Q ss_pred H----HHHHHHHHHHH
Q psy6272 385 A----HHRVDILKEIL 396 (547)
Q Consensus 385 a----~eaV~~m~~I~ 396 (547)
. .++..-++++.
T Consensus 156 ~~g~~~e~~~~~~~~~ 171 (297)
T 2zbt_A 156 GTGNVVEAVRHARTMW 171 (297)
T ss_dssp SSCCTHHHHHHHHHHH
T ss_pred cCcchHHHHhhHHHHH
Confidence 2 25554444433
No 372
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=39.58 E-value=47 Score=29.22 Aligned_cols=44 Identities=27% Similarity=0.157 Sum_probs=33.4
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhcCCCCCEEEEeCc
Q psy6272 426 IVIACVNAALKCQAVAIIVITC---------SGYSAKLVSKYRPQCPILAVSSL 470 (547)
Q Consensus 426 ia~aav~~a~~~~a~aIvv~T~---------sG~tA~~isk~RP~~pIiavt~~ 470 (547)
.+...++.|.+.+++.||+-+. -|.++..+.+.- .|||+.|-+.
T Consensus 107 ~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSva~~vl~~a-~~PVlvV~~~ 159 (163)
T 1tq8_A 107 PVDALVNLADEEKADLLVVGNVGLSTIAGRLLGSVPANVSRRA-KVDVLIVHTT 159 (163)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCCCCSHHHHHTBBHHHHHHHHT-TCEEEEECCC
T ss_pred HHHHHHHHHHhcCCCEEEECCCCCCcccceeeccHHHHHHHhC-CCCEEEEeCC
Confidence 4556677888899999998886 256777777765 4999998654
No 373
>3loq_A Universal stress protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: AMP; 2.32A {Archaeoglobus fulgidus}
Probab=39.52 E-value=1.1e+02 Score=29.27 Aligned_cols=82 Identities=13% Similarity=0.000 Sum_probs=49.5
Q ss_pred HHHhcCCcEEEEEcCC---------chHHHHHHhcCCCCCEEEEeCchhccccccccccceEEeecCCCCCCCCCCHHHH
Q psy6272 433 AALKCQAVAIIVITCS---------GYSAKLVSKYRPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRNPQADWSMDVDCR 503 (547)
Q Consensus 433 ~a~~~~a~aIvv~T~s---------G~tA~~isk~RP~~pIiavt~~~~~ar~l~l~~GV~p~~~~~~~~~~~~~d~d~~ 503 (547)
.+.+.+++.||+-+.. |.++..+.+.-| |||+.+-+.... ......+++.-. .+......
T Consensus 118 ~a~~~~~DliV~G~~g~~~~~~~~~Gs~~~~vl~~~~-~PVlvv~~~~~~------~~~~~~Ilv~~d----~s~~s~~a 186 (294)
T 3loq_A 118 IKASENYSFIAMGSRGASKFKKILLGSVSEGVLHDSK-VPVYIFKHDMVV------NSLFDRVLVAYD----FSKWADRA 186 (294)
T ss_dssp HHHHTTSSEEEEECCCCCHHHHHHHCCHHHHHHHHCS-SCEEEECCCTTT------TCTTSEEEEECC----SSHHHHHH
T ss_pred eeccCCCCEEEEcCCCCccccceeeccHHHHHHhcCC-CCEEEecCcccc------CccCCEEEEEEC----CCHHHHHH
Confidence 6778899988887752 455667777665 999999776531 122233444321 12334556
Q ss_pred HHHHHHHHHHcCCCCCCCeEEEEeccc
Q psy6272 504 VQFAIQHGMEIGIISPGDPLVLINGWR 530 (547)
Q Consensus 504 I~~a~~~~k~~g~~~~Gd~vvvv~g~~ 530 (547)
++.|..+++.. |..+.++.-+.
T Consensus 187 l~~a~~la~~~-----~~~l~ll~v~~ 208 (294)
T 3loq_A 187 LEYAKFVVKKT-----GGELHIIHVSE 208 (294)
T ss_dssp HHHHHHHHHHH-----TCEEEEEEECS
T ss_pred HHHHHHHhhhc-----CCEEEEEEEcc
Confidence 77777777654 34555555443
No 374
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=39.22 E-value=1.3e+02 Score=29.62 Aligned_cols=84 Identities=10% Similarity=0.072 Sum_probs=51.1
Q ss_pred cCEEEEcCCc--ccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEee
Q psy6272 303 SDGVVLNRIQ--LAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVL 379 (547)
Q Consensus 303 ~DgImIargD--Lg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmL 379 (547)
+||+++. |= =+..+..++-..+-+..++.++. ..||+..|. ..+-.|. -+.+ .|-..|+|++|+
T Consensus 35 v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg---~~~t~~a--------i~la~~A~~~Gadavlv 101 (294)
T 2ehh_A 35 TDAILVC-GTTGESPTLTFEEHEKVIEFAVKRAAG-RIKVIAGTG---GNATHEA--------VHLTAHAKEVGADGALV 101 (294)
T ss_dssp CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEECC---CSCHHHH--------HHHHHHHHHTTCSEEEE
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEecC---CCCHHHH--------HHHHHHHHhcCCCEEEE
Confidence 6999886 32 12234445444444445554432 589998776 4444555 4434 345569999999
Q ss_pred CCcch-----HHHHHHHHHHHHHHhh
Q psy6272 380 TQSEQ-----AHHRVDILKEILKKTE 400 (547)
Q Consensus 380 sk~Et-----a~eaV~~m~~I~~~aE 400 (547)
. .+. --+.++....|+..+.
T Consensus 102 ~-~P~y~~~s~~~l~~~f~~va~a~~ 126 (294)
T 2ehh_A 102 V-VPYYNKPTQRGLYEHFKTVAQEVD 126 (294)
T ss_dssp E-CCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred C-CCCCCCCCHHHHHHHHHHHHHhcC
Confidence 6 443 2277788888877664
No 375
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=39.09 E-value=2e+02 Score=31.97 Aligned_cols=103 Identities=12% Similarity=0.080 Sum_probs=74.0
Q ss_pred ChhhHHHHHHHHHcCCcEEEEccc------------CChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh---
Q psy6272 238 ADRDKHVVDLIVREAVDIIIMSSV------------TGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME--- 302 (547)
Q Consensus 238 t~~D~~di~~~~~~g~d~I~~sfV------------~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~--- 302 (547)
++.-+.-|+||.++|.++|.+--= ....|++++.+|..++ .+.|+.-.|+..--+++++.++.
T Consensus 308 ~~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~k--gV~i~lw~~~~~~~~~~~~~~~~~~~ 385 (641)
T 3a24_A 308 NPTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASK--NVGIILWAGYHAFERDMENVCRHYAE 385 (641)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHT--TCEEEEEEEHHHHHTSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhc--CCEEEEEeeCcchHHHHHHHHHHHHH
Confidence 455688899999999999997210 0125799999999875 57788888876655668877777
Q ss_pred --cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCC
Q psy6272 303 --SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDI 346 (547)
Q Consensus 303 --~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~ 346 (547)
.+||-++=-| -+-..+.....+|++.|.+++.-|......
T Consensus 386 ~Gv~gvK~Df~~----~~~Q~~v~~y~~i~~~aA~~~l~V~fHg~~ 427 (641)
T 3a24_A 386 MGVKGFKVDFMD----RDDQEMTAFNYRAAEMCAKYKLILDLHGTH 427 (641)
T ss_dssp HTCCEEEEECCC----CCSHHHHHHHHHHHHHHHHTTCEEEECSCC
T ss_pred cCCCEEEECCCC----CCcHHHHHHHHHHHHHHHHcCCEEEcCCCc
Confidence 4888765221 111566667777999999999887775443
No 376
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=39.00 E-value=1.7e+02 Score=30.08 Aligned_cols=32 Identities=25% Similarity=0.370 Sum_probs=23.1
Q ss_pred HHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhC-ccEEeeC
Q psy6272 334 NKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDG-ADVVVLT 380 (547)
Q Consensus 334 ~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g-~D~vmLs 380 (547)
+..+.||+....+ + . .|+..++..| +|.|++.
T Consensus 298 ~~~~iPvi~~G~i----~---~--------~~a~~~l~~g~aD~V~~g 330 (376)
T 1icp_A 298 KAYKGTFIVAGGY----D---R--------EDGNRALIEDRADLVAYG 330 (376)
T ss_dssp HHCCSCEEEESSC----C---H--------HHHHHHHHTTSCSEEEES
T ss_pred HHcCCCEEEeCCC----C---H--------HHHHHHHHCCCCcEEeec
Confidence 3467899987652 2 2 4556678887 9999998
No 377
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=38.96 E-value=50 Score=33.01 Aligned_cols=65 Identities=17% Similarity=0.228 Sum_probs=47.6
Q ss_pred hhHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 240 RDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 240 ~D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIar 310 (547)
.+.+.++.+++.|+|+|++..+ ++++++++.+.+. .++++.|- =. --.+|+.++++. +|+|-++.
T Consensus 204 ~t~eea~eA~~aGaD~I~ld~~-~~~~~k~av~~v~---~~ipi~As-GG-It~eni~~~a~tGvD~IsVgs 269 (286)
T 1x1o_A 204 RSLEELEEALEAGADLILLDNF-PLEALREAVRRVG---GRVPLEAS-GN-MTLERAKAAAEAGVDYVSVGA 269 (286)
T ss_dssp SSHHHHHHHHHHTCSEEEEESC-CHHHHHHHHHHHT---TSSCEEEE-SS-CCHHHHHHHHHHTCSEEECTH
T ss_pred CCHHHHHHHHHcCCCEEEECCC-CHHHHHHHHHHhC---CCCeEEEE-cC-CCHHHHHHHHHcCCCEEEEcH
Confidence 4477788899999999999987 6677777777664 24555551 00 126889999988 89998864
No 378
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=38.95 E-value=75 Score=30.00 Aligned_cols=88 Identities=15% Similarity=0.138 Sum_probs=53.9
Q ss_pred HHHHHHHHHcCCcEEEEcccCC-----hhhHHHHHHHHHhcCCCceEEEE--ecCHHHHhhHHHHHhh-cCEEEEcCCcc
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTG-----ANSIREMRGMLEDHVDRVLILAK--IETLLGMEYMDEIIME-SDGVVLNRIQL 313 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~s-----a~di~~~r~~l~~~~~~i~Iiak--IEt~~av~nldeIl~~-~DgImIargDL 313 (547)
.+.++.+.+.|++.|++.-+.. .-+...++++... .++.++|- |-+ .+++.++.+. +||+++|++=+
T Consensus 154 ~e~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~--~~ipvia~GGI~~---~~d~~~~~~~Gadgv~vGsal~ 228 (253)
T 1thf_D 154 RDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPL--TTLPIIASGGAGK---MEHFLEAFLAGADAALAASVFH 228 (253)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTSCSCCCHHHHHHHGGG--CCSCEEEESCCCS---HHHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHHHCCCCEEEEEeccCCCCCCCCCHHHHHHHHHh--cCCCEEEECCCCC---HHHHHHHHHcCChHHHHHHHHH
Confidence 4557888899999988864431 1245555554432 25677762 333 3556666655 79999998766
Q ss_pred cccCChHHHHHHHHHHHHHHHHcCCcEE
Q psy6272 314 AVATSVEVTFLAQKMIAARCNKQGKPFL 341 (547)
Q Consensus 314 g~e~~~e~v~~~qk~ii~~c~~~gKPvi 341 (547)
.....+++ .++.++++|.||=
T Consensus 229 ~~~~~~~~-------~~~~l~~~g~~~~ 249 (253)
T 1thf_D 229 FREIDVRE-------LKEYLKKHGVNVR 249 (253)
T ss_dssp TTCSCHHH-------HHHHHHHTTCCCC
T ss_pred cCCCCHHH-------HHHHHHHcCCccc
Confidence 54434322 3444677787753
No 379
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=38.94 E-value=2.3e+02 Score=27.40 Aligned_cols=140 Identities=12% Similarity=0.072 Sum_probs=82.0
Q ss_pred CCCChhhHHH-HHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHh-------hHHHHHhh-cCE
Q psy6272 235 PVIADRDKHV-VDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGME-------YMDEIIME-SDG 305 (547)
Q Consensus 235 p~lt~~D~~d-i~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~-------nldeIl~~-~Dg 305 (547)
|.-|..|.+. ++.+.++|++.|+++ +.-+ ..++.+.... .+++-+-|==+.|-. ..++-++. +|.
T Consensus 31 p~~t~~~i~~l~~~a~~~~~~aVcv~----p~~v-~a~~~l~~~~-~v~v~tvigFP~G~~~~~~k~~e~~~Av~~GAdE 104 (234)
T 1n7k_A 31 PRATEEDVRNLVREASDYGFRCAVLT----PVYT-VKISGLAEKL-GVKLCSVIGFPLGQAPLEVKLVEAQTVLEAGATE 104 (234)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----HHHH-HHHHHHHHHH-TCCEEEEESTTTCCSCHHHHHHHHHHHHHHTCCE
T ss_pred CCCCHHHHHHHHHHHHHhCCCEEEEc----hHHh-eeehHhCCCC-CceEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 5567777655 468889999999975 3455 6666665321 466666662222211 22222222 565
Q ss_pred EE--EcCCcccccCChHHHHHHHHHHHHHHHHcCCcE--EEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEeeC
Q psy6272 306 VV--LNRIQLAVATSVEVTFLAQKMIAARCNKQGKPF--LVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVLT 380 (547)
Q Consensus 306 Im--IargDLg~e~~~e~v~~~qk~ii~~c~~~gKPv--i~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmLs 380 (547)
|= |..|.+-- .+..-.+.+.+.|...|+|+ |+-|-.| +..|+ ...+ -+...|+|.|=-|
T Consensus 105 ID~vinig~~~~-----~v~~ei~~v~~a~~~~g~~lKvIlEt~~L---~~e~i--------~~a~ria~eaGADfVKTs 168 (234)
T 1n7k_A 105 LDVVPHLSLGPE-----AVYREVSGIVKLAKSYGAVVKVILEAPLW---DDKTL--------SLLVDSSRRAGADIVKTS 168 (234)
T ss_dssp EEECCCGGGCHH-----HHHHHHHHHHHHHHHTTCEEEEECCGGGS---CHHHH--------HHHHHHHHHTTCSEEESC
T ss_pred EEEeccchHHHH-----HHHHHHHHHHHHHhhcCCeEEEEEeccCC---CHHHH--------HHHHHHHHHhCCCEEEeC
Confidence 53 33443322 55555667888899889997 7666544 34455 3333 3556799999887
Q ss_pred Ccch-----HHHHHHH--HHHHH
Q psy6272 381 QSEQ-----AHHRVDI--LKEIL 396 (547)
Q Consensus 381 k~Et-----a~eaV~~--m~~I~ 396 (547)
-|=+ ..+.|+. |++++
T Consensus 169 TG~~~~~gAt~~dv~l~~m~~~v 191 (234)
T 1n7k_A 169 TGVYTKGGDPVTVFRLASLAKPL 191 (234)
T ss_dssp CSSSCCCCSHHHHHHHHHHHGGG
T ss_pred CCCCCCCCCCHHHHHHHHHHHHH
Confidence 2222 2377877 66554
No 380
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=38.92 E-value=1.4e+02 Score=30.10 Aligned_cols=84 Identities=13% Similarity=0.027 Sum_probs=51.1
Q ss_pred cCEEEEcCCcc--cccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEee
Q psy6272 303 SDGVVLNRIQL--AVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVL 379 (547)
Q Consensus 303 ~DgImIargDL--g~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmL 379 (547)
+|||++. |=- +..+..++-..+-+..++.++ -..||+..+. ..+-+|. -+.+ .|-..|+|++|+
T Consensus 69 v~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGvg---~~st~ea--------i~la~~A~~~Gadavlv 135 (332)
T 2r8w_A 69 VDSVGIL-GSTGIYMYLTREERRRAIEAAATILR-GRRTLMAGIG---ALRTDEA--------VALAKDAEAAGADALLL 135 (332)
T ss_dssp CSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEEEC---CSSHHHH--------HHHHHHHHHHTCSEEEE
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC---CCCHHHH--------HHHHHHHHhcCCCEEEE
Confidence 7999886 322 233444544444444555443 2589998766 4444555 4434 345569999999
Q ss_pred CCcchH-----HHHHHHHHHHHHHhh
Q psy6272 380 TQSEQA-----HHRVDILKEILKKTE 400 (547)
Q Consensus 380 sk~Eta-----~eaV~~m~~I~~~aE 400 (547)
. .+.- -+.++....|+..+.
T Consensus 136 ~-~P~Y~~~s~~~l~~~f~~VA~a~~ 160 (332)
T 2r8w_A 136 A-PVSYTPLTQEEAYHHFAAVAGATA 160 (332)
T ss_dssp C-CCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred C-CCCCCCCCHHHHHHHHHHHHHhcC
Confidence 7 5432 277778888877664
No 381
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=38.88 E-value=1.2e+02 Score=28.80 Aligned_cols=98 Identities=7% Similarity=-0.083 Sum_probs=61.6
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEec-------CHHHHhhHHHHHhh-----cCEEEEc
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIE-------TLLGMEYMDEIIME-----SDGVVLN 309 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIE-------t~~av~nldeIl~~-----~DgImIa 309 (547)
.+.++.+.+.|+|+|-+..-- . +++++++.+.+.|-.+..+ -.- ..++++.+...+.. ++.|.+.
T Consensus 34 ~~~l~~~~~~G~~~vEl~~~~-~-~~~~~~~~l~~~gl~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~~~ 110 (301)
T 3cny_A 34 QQLLSDIVVAGFQGTEVGGFF-P-GPEKLNYELKLRNLEIAGQ-WFSSYIIRDGIEKASEAFEKHCQYLKAINAPVAVVS 110 (301)
T ss_dssp HHHHHHHHHHTCCEECCCTTC-C-CHHHHHHHHHHTTCEECEE-EEEECHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHhCCCEEEecCCC-C-CHHHHHHHHHHCCCeEEEE-eccCCCChhhHHHHHHHHHHHHHHHHHcCCCEEEec
Confidence 345788999999999887432 3 8899999998877554433 111 12345556666555 3566665
Q ss_pred C------Ccccc----------cCChHHHHHHHHHHHHHHHHcCCcEEE
Q psy6272 310 R------IQLAV----------ATSVEVTFLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 310 r------gDLg~----------e~~~e~v~~~qk~ii~~c~~~gKPvi~ 342 (547)
. |.... +-.++.+...-+++...|.++|..+.+
T Consensus 111 ~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l 159 (301)
T 3cny_A 111 EQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAY 159 (301)
T ss_dssp ECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 4 33211 112245556667788888889987776
No 382
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=38.86 E-value=3.4e+02 Score=28.81 Aligned_cols=142 Identities=9% Similarity=-0.004 Sum_probs=85.9
Q ss_pred CChhhHHHH--HHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHh--hcCEEEEcCCc
Q psy6272 237 IADRDKHVV--DLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIM--ESDGVVLNRIQ 312 (547)
Q Consensus 237 lt~~D~~di--~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~--~~DgImIargD 312 (547)
+|..+.-++ ++.-+.++.+|-=|| .++|....+.+-...+ .+.|++-=-.....+.+...+. .+|+|.+-...
T Consensus 279 ~t~~elid~y~~lle~ypI~~IEDPl--~~dD~eg~a~Lt~~lg-~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlIKvnq 355 (441)
T 3qtp_A 279 KDVDGLIAEYVDYGKHYPIASIEDPF--AEDDWAAWNKFTVEHG-NFQIVGDDLLVTNPARVQMAMDKNACNSVLIKVNQ 355 (441)
T ss_dssp ECHHHHHHHHHHHHHHSCEEEEESCS--CTTCHHHHHHHHHHTT-TSEEEESTTTTTCHHHHHHHHHHTCCSEEEECGGG
T ss_pred cCHHHHHHHHHHHhhhcceeeecCCC--ChHHHHHHHHHHHhcC-CceEEeccccccCHHHHHHHHHcCCCCEEEecccc
Confidence 566666555 234456655555576 4667777776666555 6777663111122233333333 37999999888
Q ss_pred ccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHH
Q psy6272 313 LAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDIL 392 (547)
Q Consensus 313 Lg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m 392 (547)
.|- +-++.+ ++..|+++|.++++.....|. |- .-+.|+ +|..++.-+-.. +..-.|.+.-.
T Consensus 356 iGG------ITEalk-aa~lA~~~G~~vmvsHrsgET----eD-----t~iAdL--AVal~~gqIKtG-ap~rseR~aKy 416 (441)
T 3qtp_A 356 IGT------LTETFK-TIKMAQEKGWGVMASHRSGET----ED-----TFIADL--VVGLNCKQIKTG-APCRSERLCKY 416 (441)
T ss_dssp TCC------HHHHHH-HHHHHHHTTCEEEEECCSSCC----SC-----CHHHHH--HHHTTCEEEECC-CSCSHHHHHHH
T ss_pred ccc------HHHHHH-HHHHHHHcCCeEEEeCCCCCc----cH-----hHHHHH--HHHhCCCccccC-CCcchhHHHHH
Confidence 773 334443 888999999999987554541 11 012566 444577777665 55555888888
Q ss_pred HHHHHHhh
Q psy6272 393 KEILKKTE 400 (547)
Q Consensus 393 ~~I~~~aE 400 (547)
+++++--|
T Consensus 417 NqLlrIee 424 (441)
T 3qtp_A 417 NQLMRIEE 424 (441)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88776544
No 383
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=38.74 E-value=64 Score=32.43 Aligned_cols=146 Identities=10% Similarity=0.045 Sum_probs=81.2
Q ss_pred CCCChhhHHH-HHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhH-------HHHHhh-cCE
Q psy6272 235 PVIADRDKHV-VDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYM-------DEIIME-SDG 305 (547)
Q Consensus 235 p~lt~~D~~d-i~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nl-------deIl~~-~Dg 305 (547)
|..|..|+.. ++.+.++|+..|+++ +..+..+++.|. +..++|.+=|==+.|-... ++-++. +|.
T Consensus 69 p~~T~~dI~~lc~eA~~~g~aaVCV~----P~~V~~a~~~L~--~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 142 (288)
T 3oa3_A 69 LSATGSQIDVLCAEAKEYGFATVCVR----PDYVSRAVQYLQ--GTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQNGASE 142 (288)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHTT--TSSCEEEEEESTTTSCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHcC--CCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 6678888765 478899999999986 668888888884 4456666655433332222 122222 454
Q ss_pred EE--EcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEeeCCc
Q psy6272 306 VV--LNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVLTQS 382 (547)
Q Consensus 306 Im--IargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmLsk~ 382 (547)
|= |..|.|- +=.++.+..-.+.+.+.|......||+-|-.| +..|+ ..++ -+...|+|.|=-|-|
T Consensus 143 IDmVINig~lk-~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~L---t~eei--------~~A~~ia~eaGADfVKTSTG 210 (288)
T 3oa3_A 143 LDMVMNYPWLS-EKRYTDVFQDIRAVRLAAKDAILKVILETSQL---TADEI--------IAGCVLSSLAGADYVKTSTG 210 (288)
T ss_dssp EEEECCHHHHH-TTCHHHHHHHHHHHHHHTTTSEEEEECCGGGC---CHHHH--------HHHHHHHHHTTCSEEECCCS
T ss_pred EEEEeehhhhc-CCcHHHHHHHHHHHHHHhcCCCceEEEECCCC---CHHHH--------HHHHHHHHHcCCCEEEcCCC
Confidence 32 2222210 00113444444445555543334455545433 44455 3322 356679999977622
Q ss_pred ----chHHHHHHHHHHHHHH
Q psy6272 383 ----EQAHHRVDILKEILKK 398 (547)
Q Consensus 383 ----Eta~eaV~~m~~I~~~ 398 (547)
-...+.|+.|+++++.
T Consensus 211 f~~~GAT~edv~lmr~~v~~ 230 (288)
T 3oa3_A 211 FNGPGASIENVSLMSAVCDS 230 (288)
T ss_dssp SSSCCCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHHHH
Confidence 1223889999998753
No 384
>2dpr_A CON-T(K7GLA); conantoxin, nmdar antagonist, GLA-containing, metal B protein; HET: CGU; 1.70A {Synthetic} PDB: 1ont_A*
Probab=38.65 E-value=22 Score=22.48 Aligned_cols=16 Identities=25% Similarity=0.150 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy6272 91 LYQVEKILKNVKLAIEE 107 (547)
Q Consensus 91 e~~~~~~i~~ir~a~~~ 107 (547)
|+.++ |++|+|+++-.
T Consensus 3 eeyqe-mlenlreaevk 18 (26)
T 2dpr_A 3 EEYQE-MLENLREAEVK 18 (26)
T ss_dssp HHHHH-HHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHH
Confidence 56677 99999998754
No 385
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=38.63 E-value=2.5e+02 Score=27.66 Aligned_cols=119 Identities=9% Similarity=0.034 Sum_probs=64.4
Q ss_pred hHHHHHHHHHcCCcEEEEcccCCh---------------hhHHHHHHHHHhcCCCceEEEEecC--------HHHHhhHH
Q psy6272 241 DKHVVDLIVREAVDIIIMSSVTGA---------------NSIREMRGMLEDHVDRVLILAKIET--------LLGMEYMD 297 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sfV~sa---------------~di~~~r~~l~~~~~~i~IiakIEt--------~~av~nld 297 (547)
+.++|+.+++.|++.|.+..--|. +.++++.++..+.|.. +-+-|.+ ..-.+.+.
T Consensus 85 ~~~~i~~a~~aG~~~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~--V~~~l~~~~~~e~~~~~~~~~~~ 162 (302)
T 2ftp_A 85 NLKGFEAALESGVKEVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVR--VRGYISCVLGCPYDGDVDPRQVA 162 (302)
T ss_dssp SHHHHHHHHHTTCCEEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCE--EEEEEECTTCBTTTBCCCHHHHH
T ss_pred CHHHHHHHHhCCcCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCe--EEEEEEEEeeCCcCCCCCHHHHH
Confidence 457899999999999987543332 2234444555555544 3222222 11223333
Q ss_pred HHHh----h-cCEEEEcCCc-ccccCChHHHHHHHHHHHHHHHH-c-CCcEEEEcCCCCCCCcccccccCccchhhHHHH
Q psy6272 298 EIIM----E-SDGVVLNRIQ-LAVATSVEVTFLAQKMIAARCNK-Q-GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSI 369 (547)
Q Consensus 298 eIl~----~-~DgImIargD-Lg~e~~~e~v~~~qk~ii~~c~~-~-gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~na 369 (547)
++++ . +|.|-++ | .|+ ..+..+. ++++..++ . +.|+.+.++ +-.=--+ .....|
T Consensus 163 ~~~~~~~~~G~d~i~l~--DT~G~-~~P~~~~----~lv~~l~~~~~~~~l~~H~H---n~~Gla~--------An~laA 224 (302)
T 2ftp_A 163 WVARELQQMGCYEVSLG--DTIGV-GTAGATR----RLIEAVASEVPRERLAGHFH---DTYGQAL--------ANIYAS 224 (302)
T ss_dssp HHHHHHHHTTCSEEEEE--ESSSC-CCHHHHH----HHHHHHTTTSCGGGEEEEEB---CTTSCHH--------HHHHHH
T ss_pred HHHHHHHHcCCCEEEEe--CCCCC-cCHHHHH----HHHHHHHHhCCCCeEEEEeC---CCccHHH--------HHHHHH
Confidence 3333 3 5888887 4 444 2223333 33333333 3 478998765 2111112 455678
Q ss_pred HHhCccEEee
Q psy6272 370 VQDGADVVVL 379 (547)
Q Consensus 370 v~~g~D~vmL 379 (547)
+..|++.+=.
T Consensus 225 v~aGa~~vd~ 234 (302)
T 2ftp_A 225 LLEGIAVFDS 234 (302)
T ss_dssp HHTTCCEEEE
T ss_pred HHhCCCEEEe
Confidence 8899877643
No 386
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=38.60 E-value=2e+02 Score=26.53 Aligned_cols=99 Identities=13% Similarity=0.051 Sum_probs=59.1
Q ss_pred HHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEE-ec---------------CHHHHhhHHHHHhhc---
Q psy6272 243 HVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAK-IE---------------TLLGMEYMDEIIMES--- 303 (547)
Q Consensus 243 ~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~Iiak-IE---------------t~~av~nldeIl~~~--- 303 (547)
+.++.+.+.|+|+|-+.+- ...+++++++.+++.|-.+..+.- .. ..++++.+...+..+
T Consensus 19 ~~l~~~~~~G~~~vEl~~~-~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~a~~l 97 (260)
T 1k77_A 19 ERFAAARKAGFDAVEFLFP-YNYSTLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALAL 97 (260)
T ss_dssp GHHHHHHHHTCSEEECSCC-TTSCHHHHHHHHHHTTCEEEEEECCCCCGGGTCSCSTTCTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCEEEecCC-CCCCHHHHHHHHHHcCCceEEEecCCcccccccCCCCCChhHHHHHHHHHHHHHHHHHHc
Confidence 4578888999999998763 456788999999877644332211 00 023455555555553
Q ss_pred --CEEEEcCCcccccCCh----HHHHHHHHHHHHHHHHcCCcEEE
Q psy6272 304 --DGVVLNRIQLAVATSV----EVTFLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 304 --DgImIargDLg~e~~~----e~v~~~qk~ii~~c~~~gKPvi~ 342 (547)
..|.+.+|...-..+. +.+...-+++...|.++|..+.+
T Consensus 98 G~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~ 142 (260)
T 1k77_A 98 NCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKRILV 142 (260)
T ss_dssp TCSEEECCCCBCCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred CCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 5666655543222222 34445556677777777776655
No 387
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=38.57 E-value=2.2e+02 Score=28.71 Aligned_cols=105 Identities=12% Similarity=0.108 Sum_probs=69.4
Q ss_pred HcCCcEEEEcccCC--------------hhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccc
Q psy6272 250 REAVDIIIMSSVTG--------------ANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAV 315 (547)
Q Consensus 250 ~~g~d~I~~sfV~s--------------a~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg~ 315 (547)
+.+..+|+-+..+. .+.++.++++.++. .+.+++-+-..+.++-+.+ .+|.+-||-+++--
T Consensus 70 ~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~--GLpv~Tev~D~~~v~~l~~---~vd~lkIgA~~~~n 144 (298)
T 3fs2_A 70 KLGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLKKEY--GFPVLTDIHTEEQCAAVAP---VVDVLQIPAFLCRQ 144 (298)
T ss_dssp HHTCCEEEECBCCCCC---------CCHHHHHHHHHHHHHHH--CCCEEEECCSHHHHHHHTT---TCSEEEECGGGTTC
T ss_pred HcCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHHh---hCCEEEECccccCC
Confidence 35688888875542 25566777777654 5788888888777766544 59999999766652
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHH-hCccEEeeC
Q psy6272 316 ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQ-DGADVVVLT 380 (547)
Q Consensus 316 e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~-~g~D~vmLs 380 (547)
.+ +++.+-+.||||++.|.|. -|-.|+ ..++..+. .|.+-++|-
T Consensus 145 ------~~-----LLr~va~~gkPVilK~Gms--~t~~ei--------~~ave~i~~~Gn~~iiL~ 189 (298)
T 3fs2_A 145 ------TD-----LLIAAARTGRVVNVKKGQF--LAPWDM--------KNVLAKITESGNPNVLAT 189 (298)
T ss_dssp ------HH-----HHHHHHHTTSEEEEECCTT--CCGGGH--------HHHHHHHHTTTCCCEEEE
T ss_pred ------HH-----HHHHHHccCCcEEEeCCCC--CCHHHH--------HHHHHHHHHcCCCeEEEE
Confidence 22 3334557899999999862 233455 66666554 366656663
No 388
>3dlo_A Universal stress protein; unknown function, structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics; HET: MSE; 1.97A {Archaeoglobus fulgidus} PDB: 3qtb_A*
Probab=38.15 E-value=49 Score=28.84 Aligned_cols=41 Identities=22% Similarity=0.162 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhcCCCCCEEEE
Q psy6272 426 IVIACVNAALKCQAVAIIVITC---------SGYSAKLVSKYRPQCPILAV 467 (547)
Q Consensus 426 ia~aav~~a~~~~a~aIvv~T~---------sG~tA~~isk~RP~~pIiav 467 (547)
.+...++.|.+.+++.||+-+. -|.++..+.+. ..|||+.|
T Consensus 105 ~~~~I~~~a~~~~~DLIV~G~~g~~~~~~~~lGSv~~~vl~~-a~~PVLvV 154 (155)
T 3dlo_A 105 PPDDIVDFADEVDAIAIVIGIRKRSPTGKLIFGSVARDVILK-ANKPVICI 154 (155)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCEECTTSCEECCHHHHHHHHH-CSSCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCCCCCEEeccHHHHHHHh-CCCCEEEe
Confidence 4566777888999999998765 37788888885 46999876
No 389
>1v8a_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, structural genomics, riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} PDB: 3hpd_A
Probab=38.08 E-value=36 Score=33.25 Aligned_cols=46 Identities=26% Similarity=0.258 Sum_probs=34.3
Q ss_pred HHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEE
Q psy6272 292 GMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 292 av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~ 342 (547)
.++.+.+++..+|.+.|++|=+. ++.....+.+++.+++.++|+++
T Consensus 46 ~~~e~~~~~~~~dalvi~~G~~~-----~~~~~~~~~~~~~a~~~~~pvVl 91 (265)
T 1v8a_A 46 AEEELEEMIRLADAVVINIGTLD-----SGWRRSMVKATEIANELGKPIVL 91 (265)
T ss_dssp CTTTHHHHHHHCSEEEEECTTCC-----HHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHCCEEEEEECCCC-----HHHHHHHHHHHHHHHHcCCcEEE
Confidence 35567788888999999977652 33334455577888999999998
No 390
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=37.81 E-value=2.9e+02 Score=26.82 Aligned_cols=115 Identities=12% Similarity=0.142 Sum_probs=68.7
Q ss_pred HHHHHHcCCcEEEEcccC-ChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh--cCEEEEcCCcccc-cCChH
Q psy6272 245 VDLIVREAVDIIIMSSVT-GANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME--SDGVVLNRIQLAV-ATSVE 320 (547)
Q Consensus 245 i~~~~~~g~d~I~~sfV~-sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~--~DgImIargDLg~-e~~~e 320 (547)
+..+...|+|.|.+-.-. +.+++.++.++..+. .+.+++-+-|.+ .++..+.. +|.|-|..-||.- +..++
T Consensus 116 i~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~l--Gl~~lvEv~~~e---E~~~A~~l~g~~iIGinnr~l~t~~~d~~ 190 (251)
T 1i4n_A 116 VKLASSVGADAILIIARILTAEQIKEIYEAAEEL--GMDSLVEVHSRE---DLEKVFSVIRPKIIGINTRDLDTFEIKKN 190 (251)
T ss_dssp HHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTT--TCEEEEEECSHH---HHHHHHTTCCCSEEEEECBCTTTCCBCTT
T ss_pred HHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHc--CCeEEEEeCCHH---HHHHHHhcCCCCEEEEeCcccccCCCCHH
Confidence 566899999998876554 556777777777655 344555554433 34444554 6888888777642 22222
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHH
Q psy6272 321 VTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAH 386 (547)
Q Consensus 321 ~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~ 386 (547)
.....-+ .. ..+++++....+- | - .|+..+... +|++++. |...
T Consensus 191 ~~~~l~~----~i-p~~~~vIaEsGI~---t---~--------edv~~~~~~-a~avLVG--~aim 234 (251)
T 1i4n_A 191 VLWELLP----LV-PDDTVVVAESGIK---D---P--------RELKDLRGK-VNAVLVG--TSIM 234 (251)
T ss_dssp HHHHHGG----GS-CTTSEEEEESCCC---C---G--------GGHHHHTTT-CSEEEEC--HHHH
T ss_pred HHHHHHH----hC-CCCCEEEEeCCCC---C---H--------HHHHHHHHh-CCEEEEc--HHHc
Confidence 2222111 11 1256777655422 2 2 777888888 9999996 5444
No 391
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=37.74 E-value=46 Score=32.30 Aligned_cols=59 Identities=14% Similarity=0.191 Sum_probs=37.2
Q ss_pred hhHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHh
Q psy6272 294 EYMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQD 372 (547)
Q Consensus 294 ~nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~ 372 (547)
+.++.+.+. +|+|||| |-.++. .+.+.. +++++++...|++..+. ..+. +..
T Consensus 22 ~~~~~~~~~GtD~i~vG-Gs~gvt--~~~~~~----~v~~ik~~~~Pvvlfp~------~~~~--------------v~~ 74 (228)
T 3vzx_A 22 EQLEILCESGTDAVIIG-GSDGVT--EDNVLR----MMSKVRRFLVPCVLEVS------AIEA--------------IVP 74 (228)
T ss_dssp THHHHHHTSSCSEEEEC-CCSCCC--HHHHHH----HHHHHTTSSSCEEEECS------CGGG--------------CCS
T ss_pred HHHHHHHHcCCCEEEEC-CcCCCC--HHHHHH----HHHHhhccCCCEEEeCC------CHHH--------------ccc
Confidence 345556555 7999999 544442 344443 44556668999998443 2222 346
Q ss_pred CccEEee
Q psy6272 373 GADVVVL 379 (547)
Q Consensus 373 g~D~vmL 379 (547)
|+|++++
T Consensus 75 gaD~~l~ 81 (228)
T 3vzx_A 75 GFDLYFI 81 (228)
T ss_dssp CCSEEEE
T ss_pred cCCEEEE
Confidence 9999976
No 392
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=37.72 E-value=1.7e+02 Score=27.56 Aligned_cols=101 Identities=13% Similarity=0.084 Sum_probs=60.0
Q ss_pred HHHHHHHHHcCCcEEEEcccCCh----hhHHHHHHHHHhcCCCceEEEE------ecC------HHHHhhHHHHHhhc--
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGA----NSIREMRGMLEDHVDRVLILAK------IET------LLGMEYMDEIIMES-- 303 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa----~di~~~r~~l~~~~~~i~Iiak------IEt------~~av~nldeIl~~~-- 303 (547)
.+.++.+.+.|+|+|-+..-... .++.++++.+++.|-.+..+.- +-+ .++++.+...+..+
T Consensus 20 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~ 99 (290)
T 2qul_A 20 PATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKRLLDDCHL 99 (290)
T ss_dssp HHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45578889999999998765422 6789999999887755444331 111 23445555555553
Q ss_pred ---CEEEEc----CCc--c----cccCChHHHHHHHHHHHHHHHHcCCcEEE
Q psy6272 304 ---DGVVLN----RIQ--L----AVATSVEVTFLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 304 ---DgImIa----rgD--L----g~e~~~e~v~~~qk~ii~~c~~~gKPvi~ 342 (547)
..|.+. .|. + ..+-..+.+...-+++...|+++|..+.+
T Consensus 100 lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~l 151 (290)
T 2qul_A 100 LGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYAL 151 (290)
T ss_dssp HTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEE
T ss_pred cCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 444431 122 1 11111234555556677788888887766
No 393
>2zbt_A Pyridoxal biosynthesis lyase PDXS; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.65A {Thermus thermophilus} PDB: 2iss_A*
Probab=37.70 E-value=91 Score=30.52 Aligned_cols=62 Identities=13% Similarity=-0.048 Sum_probs=36.8
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhh-HHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEc
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANS-IREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLN 309 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~d-i~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIa 309 (547)
.+.++.+.+.|+|+|..+|+.+..+ ++.+++ .+..+.+++.+.|++-.... .-.-+|.|-+-
T Consensus 90 ~~~~~~~~~aGad~v~~~~~~~~~~~~~~~~~----~~~~i~l~~~v~~~~~~~~a--~~~Gad~I~v~ 152 (297)
T 2zbt_A 90 FVEAMILEAIGVDFIDESEVLTPADEEHHIDK----WKFKVPFVCGARNLGEALRR--IAEGAAMIRTK 152 (297)
T ss_dssp HHHHHHHHHTTCSEEEEETTSCCSCSSCCCCG----GGCSSCEEEEESSHHHHHHH--HHTTCSEEEEC
T ss_pred HHHHHHHHHCCCCEEeeeCCCChHHHHHHHHH----hCCCceEEeecCCHHHHHHH--HHcCCCEEEEc
Confidence 5668888899999997777654422 233322 12356777777776543332 12226776553
No 394
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=37.34 E-value=1e+02 Score=28.58 Aligned_cols=96 Identities=13% Similarity=0.035 Sum_probs=56.3
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcC--CCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccccCC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHV--DRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAVATS 318 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~--~~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~e~~ 318 (547)
.+.+..+++.|+++|.+-.= + .+..++.+.+.+.. ....++.- ++.+--++. +|||-++..|+....
T Consensus 16 ~~~~~~a~~~Gv~~v~lr~k-~-~~~~~~~~~i~~l~~~~~~~livn-------d~~~~A~~~gadgvhl~~~~~~~~~- 85 (210)
T 3ceu_A 16 DKIITALFEEGLDILHLRKP-E-TPAMYSERLLTLIPEKYHRRIVTH-------EHFYLKEEFNLMGIHLNARNPSEPH- 85 (210)
T ss_dssp HHHHHHHHHTTCCEEEECCS-S-CCHHHHHHHHHHSCGGGGGGEEES-------SCTTHHHHTTCSEEECCSSSCSCCT-
T ss_pred HHHHHHHHHCCCCEEEEccC-C-CCHHHHHHHHHHHHHHhCCeEEEe-------CCHHHHHHcCCCEEEECcccccccc-
Confidence 57889999999999998842 2 12222333333221 23444432 233333333 799999888774321
Q ss_pred hHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 319 VEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 319 ~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
..++.++..+. .+ .++..|. .|+|.+.++
T Consensus 86 ----------------~~~~~ig~s~~---t~-------------~e~~~A~-~GaDyv~~g 114 (210)
T 3ceu_A 86 ----------------DYAGHVSCSCH---SV-------------EEVKNRK-HFYDYVFMS 114 (210)
T ss_dssp ----------------TCCSEEEEEEC---SH-------------HHHHTTG-GGSSEEEEC
T ss_pred ----------------ccCCEEEEecC---CH-------------HHHHHHh-hCCCEEEEC
Confidence 13777777654 22 3445555 799999987
No 395
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=37.16 E-value=1.1e+02 Score=30.40 Aligned_cols=119 Identities=16% Similarity=0.145 Sum_probs=65.3
Q ss_pred hhHHHHHHHHHcCCcEEEEcc----------------cCChhhHHHHHHHHHhcCCCceEEEEec----CHHHHhhHHHH
Q psy6272 240 RDKHVVDLIVREAVDIIIMSS----------------VTGANSIREMRGMLEDHVDRVLILAKIE----TLLGMEYMDEI 299 (547)
Q Consensus 240 ~D~~di~~~~~~g~d~I~~sf----------------V~sa~di~~~r~~l~~~~~~i~IiakIE----t~~av~nldeI 299 (547)
.-.+..+.+.+. +|+|-+.+ -++++-+.++-+.+.+.- ...|..||= ..+.++-...+
T Consensus 72 ~~~~aa~~a~~~-~d~Iein~gcP~~~~r~~~~G~~l~~~~~~~~eiv~~v~~~~-~~pv~vKir~G~~~~~~~~~a~~l 149 (318)
T 1vhn_A 72 ELSEAARILSEK-YKWIDLNAGCPVRKVVKEGAGGALLKDLRHFRYIVRELRKSV-SGKFSVKTRLGWEKNEVEEIYRIL 149 (318)
T ss_dssp HHHHHHHHHTTT-CSEEEEEECCCCHHHHHTTCGGGGGSCHHHHHHHHHHHHHHC-SSEEEEEEESCSSSCCHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCEEEEECCCCcHhcCCCCcccchhhCHHHHHHHHHHHHHhh-CCCEEEEecCCCChHHHHHHHHHH
Confidence 334455677777 99987753 233344444444443322 268888962 22333333333
Q ss_pred Hhh-cCEEEEcCC-cccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHH-hCccE
Q psy6272 300 IME-SDGVVLNRI-QLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQ-DGADV 376 (547)
Q Consensus 300 l~~-~DgImIarg-DLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~-~g~D~ 376 (547)
.+. +|+|.|-.+ ....--+...+ ..+...++ +.||+....+. .. .|+..++. .|+|+
T Consensus 150 ~~~G~d~i~v~g~~~~~~~~~~~~~-----~~i~~i~~-~ipVi~~GgI~------s~--------~da~~~l~~~gad~ 209 (318)
T 1vhn_A 150 VEEGVDEVFIHTRTVVQSFTGRAEW-----KALSVLEK-RIPTFVSGDIF------TP--------EDAKRALEESGCDG 209 (318)
T ss_dssp HHTTCCEEEEESSCTTTTTSSCCCG-----GGGGGSCC-SSCEEEESSCC------SH--------HHHHHHHHHHCCSE
T ss_pred HHhCCCEEEEcCCCccccCCCCcCH-----HHHHHHHc-CCeEEEECCcC------CH--------HHHHHHHHcCCCCE
Confidence 333 688887532 22211121111 12233334 89999977643 23 77788887 59999
Q ss_pred EeeC
Q psy6272 377 VVLT 380 (547)
Q Consensus 377 vmLs 380 (547)
||+.
T Consensus 210 V~iG 213 (318)
T 1vhn_A 210 LLVA 213 (318)
T ss_dssp EEES
T ss_pred EEEC
Confidence 9998
No 396
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=37.07 E-value=1.5e+02 Score=29.16 Aligned_cols=90 Identities=12% Similarity=0.054 Sum_probs=53.4
Q ss_pred HHHHh-h-cCEEEEcCCcc--cccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHH
Q psy6272 297 DEIIM-E-SDGVVLNRIQL--AVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQ 371 (547)
Q Consensus 297 deIl~-~-~DgImIargDL--g~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~ 371 (547)
+-.++ . +|||++. |=- +..+..++-..+-+..++.++ -..||+..|. ..+-.|. -+.+ .|-.
T Consensus 31 ~~li~~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg---~~~t~~a--------i~la~~a~~ 97 (293)
T 1f6k_A 31 RHNIDKMKVDGLYVG-GSTGENFMLSTEEKKEIFRIAKDEAK-DQIALIAQVG---SVNLKEA--------VELGKYATE 97 (293)
T ss_dssp HHHHHTSCCSEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSEEEEECC---CSCHHHH--------HHHHHHHHH
T ss_pred HHHHhhCCCcEEEeC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEecC---CCCHHHH--------HHHHHHHHh
Confidence 33455 3 6999886 322 233444554444454555543 2589998776 4444455 3333 3445
Q ss_pred hCccEEeeCCcchH-----HHHHHHHHHHHHHhh
Q psy6272 372 DGADVVVLTQSEQA-----HHRVDILKEILKKTE 400 (547)
Q Consensus 372 ~g~D~vmLsk~Eta-----~eaV~~m~~I~~~aE 400 (547)
.|+|++|+. .+.- -+.++....|+..+.
T Consensus 98 ~Gadavlv~-~P~y~~~~~~~l~~~f~~va~a~~ 130 (293)
T 1f6k_A 98 LGYDCLSAV-TPFYYKFSFPEIKHYYDTIIAETG 130 (293)
T ss_dssp HTCSEEEEE-CCCSSCCCHHHHHHHHHHHHHHHC
T ss_pred cCCCEEEEC-CCCCCCCCHHHHHHHHHHHHHhCC
Confidence 699999996 4432 277777888877665
No 397
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=37.06 E-value=3.2e+02 Score=27.09 Aligned_cols=95 Identities=8% Similarity=0.114 Sum_probs=62.0
Q ss_pred CCChhhHHHHHHHHHcCCcEEEEcc----c---------CChhhHHHHHHHHHhcCCCceEEEEecC-------HHHHhh
Q psy6272 236 VIADRDKHVVDLIVREAVDIIIMSS----V---------TGANSIREMRGMLEDHVDRVLILAKIET-------LLGMEY 295 (547)
Q Consensus 236 ~lt~~D~~di~~~~~~g~d~I~~sf----V---------~sa~di~~~r~~l~~~~~~i~IiakIEt-------~~av~n 295 (547)
.+|-.|.---+.+-+.|+|.|.+.. + -|.+++...-+.+....+...|++=++- .++++|
T Consensus 21 ~~tayDa~sA~l~e~aG~d~ilvGdSl~~~~lG~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~n 100 (275)
T 1o66_A 21 MLTAYESSFAALMDDAGVEMLLVGDSLGMAVQGRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAA 100 (275)
T ss_dssp EEECCSHHHHHHHHHTTCCEEEECTTHHHHTTCCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHHH
T ss_pred EEeCcCHHHHHHHHHcCCCEEEECHHHHHHHcCCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHHH
Confidence 3566777777788889999997642 1 1234443333334433455677787662 467888
Q ss_pred HHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEE
Q psy6272 296 MDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 296 ldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~ 342 (547)
...+++. ++||-+-=|+ .+...|+++.++|+||+-
T Consensus 101 a~rl~kaGa~aVklEdg~------------e~~~~I~al~~agIpV~g 136 (275)
T 1o66_A 101 AAELMAAGAHMVKLEGGV------------WMAETTEFLQMRGIPVCA 136 (275)
T ss_dssp HHHHHHTTCSEEEEECSG------------GGHHHHHHHHHTTCCEEE
T ss_pred HHHHHHcCCcEEEECCcH------------HHHHHHHHHHHcCCCeEe
Confidence 8899986 6999887552 223355666789999873
No 398
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=37.01 E-value=53 Score=35.45 Aligned_cols=94 Identities=17% Similarity=0.179 Sum_probs=53.9
Q ss_pred HHHHHHHHHcCCcEEEEcccC---------ChhhHHHHHHHHHhc--CCCceEEEEecCHHHHhhHHHHHhh----cCEE
Q psy6272 242 KHVVDLIVREAVDIIIMSSVT---------GANSIREMRGMLEDH--VDRVLILAKIETLLGMEYMDEIIME----SDGV 306 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~---------sa~di~~~r~~l~~~--~~~i~IiakIEt~~av~nldeIl~~----~DgI 306 (547)
.++.+.+.+.|+|+|.+|.-. +.+-+.++++.+.+. +.++.||+- -|+.+-.++++. +|+|
T Consensus 354 ~e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~----GGI~~g~Dv~kaLalGAdaV 429 (511)
T 1kbi_A 354 TEDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVD----GGVRRGTDVLKALCLGAKGV 429 (511)
T ss_dssp HHHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEE----SSCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEE----CCCCCHHHHHHHHHcCCCEE
Confidence 566788999999999996421 112344555555432 346888883 334444444333 8999
Q ss_pred EEcCCcccccC--C---h-HHHHHHHHHHHHHHHHcCCc
Q psy6272 307 VLNRIQLAVAT--S---V-EVTFLAQKMIAARCNKQGKP 339 (547)
Q Consensus 307 mIargDLg~e~--~---~-e~v~~~qk~ii~~c~~~gKP 339 (547)
||||.-|-... | . +.+..+.+++-......|..
T Consensus 430 ~iGr~~l~~~~~~G~~gv~~~l~~l~~el~~~m~~~G~~ 468 (511)
T 1kbi_A 430 GLGRPFLYANSCYGRNGVEKAIEILRDEIEMSMRLLGVT 468 (511)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred EECHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99996553211 1 1 13334555555555666653
No 399
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=36.97 E-value=82 Score=27.73 Aligned_cols=54 Identities=11% Similarity=0.041 Sum_probs=38.8
Q ss_pred HHhhHHHHHhh--cCEEE--EcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcC
Q psy6272 292 GMEYMDEIIME--SDGVV--LNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGD 345 (547)
Q Consensus 292 av~nldeIl~~--~DgIm--IargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq 345 (547)
.+..+++.+.. .|.|+ +|-.|+.-..+.+.+....+++++.++++|.++++.|.
T Consensus 50 ~~~~~~~~~~~~~pd~Vii~~G~ND~~~~~~~~~~~~~l~~li~~~~~~~~~vil~~~ 107 (190)
T 1ivn_A 50 GLARLPALLKQHQPRWVLVELGGNDGLRGFQPQQTEQTLRQILQDVKAANAEPLLMQI 107 (190)
T ss_dssp HHHHHHHHHHHHCCSEEEEECCTTTTSSSCCHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHhcCCCEEEEEeeccccccCCCHHHHHHHHHHHHHHHHHcCCCEEEEec
Confidence 33444444432 57554 45568887778888888889999999999988887653
No 400
>1i8d_A Riboflavin synthase; riboflavin biosynthesis, antimicrobial target, structure-based design, transferase; 2.00A {Escherichia coli} SCOP: b.43.4.3 b.43.4.3 PDB: 1hze_A* 1i18_A* 1pkv_A*
Probab=36.81 E-value=76 Score=30.50 Aligned_cols=56 Identities=21% Similarity=0.178 Sum_probs=45.0
Q ss_pred EEEecCC-CcccccCCCCEEEEeceeEEEEEEEeCCeEEEEEE-------eCcEeCCCceeeeCC
Q psy6272 173 RLFVDSM-ELPKRVIPDDIVYIDRNIKLKVVEKENNDVHCTVI-------RGGKLMDNQLVTVPR 229 (547)
Q Consensus 173 ~i~v~~~-~~~~~v~~Gd~I~idD~I~l~V~~v~~~~v~~~V~-------~gG~L~s~Kginlp~ 229 (547)
.+.+..+ .+.+.+.+||.|-+|- ++|.|.+++++.+.+-+. +=|.++...-|||-.
T Consensus 23 ~l~i~~~~~~~~~l~~g~SIAvnG-vcLTV~~v~~~~F~vdvipETl~~T~Lg~l~~Gd~VNLEr 86 (213)
T 1i8d_A 23 THVVELPDHMLDGLETGASVAHNG-CCLTVTEINGNHVSFDLMKETLRITNLGDLKVGDWVNVER 86 (213)
T ss_dssp EEEEECCGGGTTTCCTTCEEEETT-EEEEEEEEETTEEEEEEEHHHHHHSGGGGCCTTCEEEEEE
T ss_pred EEEEEEChHHhccCCCCcEEEECC-EEeeEEEEcCCEEEEEEeHHHHhhcccccCCCCCEEEeCc
Confidence 3444444 5678999999999998 888999999999888874 667888888899853
No 401
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=36.68 E-value=1.8e+02 Score=30.14 Aligned_cols=89 Identities=9% Similarity=0.227 Sum_probs=64.2
Q ss_pred hHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEe--cCHHHHhhHHHHHhh-cCEEEEcCCcccccC
Q psy6272 241 DKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKI--ETLLGMEYMDEIIME-SDGVVLNRIQLAVAT 317 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakI--Et~~av~nldeIl~~-~DgImIargDLg~e~ 317 (547)
-.+.|....+.|+|+|=++. .+.++.+.++..-++ .++.++|-| ..+.++. =++. +|.+=|.||.+|-
T Consensus 48 tv~Qi~~l~~aG~diVRvav-p~~~~a~al~~I~~~--~~vPlvaDiHf~~~lal~----a~e~G~dklRINPGNig~-- 118 (366)
T 3noy_A 48 TLNQIKRLYEAGCEIVRVAV-PHKEDVEALEEIVKK--SPMPVIADIHFAPSYAFL----SMEKGVHGIRINPGNIGK-- 118 (366)
T ss_dssp HHHHHHHHHHTTCCEEEEEC-CSHHHHHHHHHHHHH--CSSCEEEECCSCHHHHHH----HHHTTCSEEEECHHHHSC--
T ss_pred HHHHHHHHHHcCCCEEEeCC-CChHHHHHHHHHHhc--CCCCEEEeCCCCHHHHHH----HHHhCCCeEEECCcccCc--
Confidence 35567788899999999885 556777777665554 468999987 3333433 2333 8999999999983
Q ss_pred ChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 318 SVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 318 ~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
.+++ +.++.+|+++|+|+=+.
T Consensus 119 -~~~~----~~vv~~ak~~~~piRIG 139 (366)
T 3noy_A 119 -EEIV----REIVEEAKRRGVAVRIG 139 (366)
T ss_dssp -HHHH----HHHHHHHHHHTCEEEEE
T ss_pred -hhHH----HHHHHHHHHcCCCEEEe
Confidence 3333 56999999999998764
No 402
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=36.55 E-value=79 Score=30.87 Aligned_cols=144 Identities=15% Similarity=0.114 Sum_probs=81.1
Q ss_pred CCCChhhHHH-HHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHH----HH---Hh-hcCE
Q psy6272 235 PVIADRDKHV-VDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMD----EI---IM-ESDG 305 (547)
Q Consensus 235 p~lt~~D~~d-i~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nld----eI---l~-~~Dg 305 (547)
|..|..|++. +..+.++|+..|+++ +.-+..+++.|. +..++|.+=|==+.|-...+ |. ++ =+|.
T Consensus 38 p~~t~~~i~~lc~eA~~~~~~aVcV~----p~~v~~a~~~L~--~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 111 (239)
T 3ngj_A 38 ADATEEQIRKLCSEAAEYKFASVCVN----PTWVPLCAELLK--GTGVKVCTVIGFPLGATPSEVKAYETKVAVEQGAEE 111 (239)
T ss_dssp TTCCHHHHHHHHHHHHHHTCSEEEEC----GGGHHHHHHHHT--TSSCEEEEEESTTTCCSCHHHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhC--CCCCeEEEEeccCCCCCchHHHHHHHHHHHHcCCCE
Confidence 5667777755 478889999999985 467888888884 45566666553333322221 11 11 1343
Q ss_pred E--EEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEeeCC-
Q psy6272 306 V--VLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVLTQ- 381 (547)
Q Consensus 306 I--mIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmLsk- 381 (547)
| .|..|.|- +=.++.+..-.+.+.+.|...-.+||+-|-.| |..|+ ..+. -+...|+|.|=-|-
T Consensus 112 IDmViNig~lk-~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~L---t~eei--------~~a~~ia~~aGADfVKTSTG 179 (239)
T 3ngj_A 112 VDMVINIGMVK-AKKYDDVEKDVKAVVDASGKALTKVIIECCYL---TNEEK--------VEVCKRCVAAGAEYVKTSTG 179 (239)
T ss_dssp EEEECCHHHHH-TTCHHHHHHHHHHHHHHHTTSEEEEECCGGGS---CHHHH--------HHHHHHHHHHTCSEEECCCS
T ss_pred EEEEeehHHhc-cccHHHHHHHHHHHHHHhcCCceEEEEecCCC---CHHHH--------HHHHHHHHHHCcCEEECCCC
Confidence 3 22333221 11123455455556666643334566555544 34455 3333 23567999998872
Q ss_pred ---cchHHHHHHHHHHHH
Q psy6272 382 ---SEQAHHRVDILKEIL 396 (547)
Q Consensus 382 ---~Eta~eaV~~m~~I~ 396 (547)
+-+..+.|+.|++.+
T Consensus 180 f~~ggAt~~dv~lmr~~v 197 (239)
T 3ngj_A 180 FGTHGATPEDVKLMKDTV 197 (239)
T ss_dssp SSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHhh
Confidence 223348999988764
No 403
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=36.40 E-value=1.6e+02 Score=28.88 Aligned_cols=84 Identities=13% Similarity=0.041 Sum_probs=50.6
Q ss_pred cCEEEEcCCc--ccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEee
Q psy6272 303 SDGVVLNRIQ--LAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVL 379 (547)
Q Consensus 303 ~DgImIargD--Lg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmL 379 (547)
+||+++. |= =+..+..++-..+-+..++.++. ..||+..+. ..+-.|. -+.+ .|-..|+|++|+
T Consensus 35 v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg---~~~t~~a--------i~la~~a~~~Gadavlv 101 (289)
T 2yxg_A 35 VSGIVAV-GTTGESPTLSHEEHKKVIEKVVDVVNG-RVQVIAGAG---SNCTEEA--------IELSVFAEDVGADAVLS 101 (289)
T ss_dssp CSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSEEEEECC---CSSHHHH--------HHHHHHHHHHTCSEEEE
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhCC-CCcEEEeCC---CCCHHHH--------HHHHHHHHhcCCCEEEE
Confidence 6999886 32 22334444444444445554432 489998776 4444555 4434 345569999999
Q ss_pred CCcch-----HHHHHHHHHHHHHHhh
Q psy6272 380 TQSEQ-----AHHRVDILKEILKKTE 400 (547)
Q Consensus 380 sk~Et-----a~eaV~~m~~I~~~aE 400 (547)
. .+. --+.++....|+..+.
T Consensus 102 ~-~P~y~~~s~~~l~~~f~~ia~a~~ 126 (289)
T 2yxg_A 102 I-TPYYNKPTQEGLRKHFGKVAESIN 126 (289)
T ss_dssp E-CCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred C-CCCCCCCCHHHHHHHHHHHHHhcC
Confidence 6 443 2277778888877664
No 404
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=36.25 E-value=1.5e+02 Score=32.40 Aligned_cols=32 Identities=22% Similarity=0.380 Sum_probs=22.9
Q ss_pred HcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhC-ccEEeeC
Q psy6272 335 KQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDG-ADVVVLT 380 (547)
Q Consensus 335 ~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g-~D~vmLs 380 (547)
..++||+....+. + . .++..++..| +|+|++.
T Consensus 278 ~~~iPvi~~Ggi~---~---~--------~~a~~~l~~g~aD~V~~g 310 (671)
T 1ps9_A 278 HVSLPLVTTNRIN---D---P--------QVADDILSRGDADMVSMA 310 (671)
T ss_dssp SCSSCEEECSSCC---S---H--------HHHHHHHHTTSCSEEEES
T ss_pred hcCceEEEeCCCC---C---H--------HHHHHHHHcCCCCEEEeC
Confidence 4589999865532 1 2 5556678888 9999998
No 405
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=36.25 E-value=1.7e+02 Score=28.47 Aligned_cols=110 Identities=16% Similarity=0.088 Sum_probs=73.9
Q ss_pred hHHHHHHHHHcCCcEEEEc-----ccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCccc
Q psy6272 241 DKHVVDLIVREAVDIIIMS-----SVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLA 314 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~s-----fV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg 314 (547)
|...+..+.+.|+.+|-+= |=.+.+|++.+|+.. ++.|+.|==-.... .+.|.... +|+|.+-=.-|.
T Consensus 62 ~~~~iA~~y~~~A~~IsVlTd~~~F~gs~~dL~~ir~~v-----~lPvLrKDfi~~~~-qi~ea~~~GAD~ilLi~a~l~ 135 (251)
T 1i4n_A 62 SLEDFIRMYDELADAISILTEKHYFKGDPAFVRAARNLT-----CRPILAKDFYIDTV-QVKLASSVGADAILIIARILT 135 (251)
T ss_dssp CHHHHHHHHHHHCSEEEEECCCSSSCCCTHHHHHHHTTC-----CSCEEEECCCCSTH-HHHHHHHTTCSEEEEEGGGSC
T ss_pred CHHHHHHHHHHhCCceEEEecccccCCCHHHHHHHHHhC-----CCCEEEeeCCCCHH-HHHHHHHcCCCEEEEecccCC
Confidence 6666776666668888774 778999999999753 57788772112223 25553333 798876533332
Q ss_pred ccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHh-CccEEeeC
Q psy6272 315 VATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQD-GADVVVLT 380 (547)
Q Consensus 315 ~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~-g~D~vmLs 380 (547)
. .--+.++..|++.|.-+++ |+.+. .++..|... |+|.+-.+
T Consensus 136 ----~----~~l~~l~~~a~~lGl~~lv-----------Ev~~~-----eE~~~A~~l~g~~iIGin 178 (251)
T 1i4n_A 136 ----A----EQIKEIYEAAEELGMDSLV-----------EVHSR-----EDLEKVFSVIRPKIIGIN 178 (251)
T ss_dssp ----H----HHHHHHHHHHHTTTCEEEE-----------EECSH-----HHHHHHHTTCCCSEEEEE
T ss_pred ----H----HHHHHHHHHHHHcCCeEEE-----------EeCCH-----HHHHHHHhcCCCCEEEEe
Confidence 2 2335588899999999998 34222 566788888 99999887
No 406
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=36.02 E-value=3.2e+02 Score=29.02 Aligned_cols=110 Identities=17% Similarity=0.054 Sum_probs=75.9
Q ss_pred hHHHHHHHHHcCCcEEEE-----cccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCccc
Q psy6272 241 DKHVVDLIVREAVDIIIM-----SSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLA 314 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~-----sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIargDLg 314 (547)
|...+..+.+.||..|-+ -|=.+.+|++++|+.. ++.|+.|==-.... .+.|.... +|+|.+-=.-|.
T Consensus 69 ~~~~iA~~y~~~A~~IsvLTd~~~F~gs~~dL~~vr~~v-----~lPvLrKDFI~d~~-Qi~ea~~~GAD~ILLi~a~l~ 142 (452)
T 1pii_A 69 DPARIAAIYKHYASAISVLTDEKYFQGSFNFLPIVSQIA-----PQPILCKDFIIDPY-QIYLARYYQADACLLMLSVLD 142 (452)
T ss_dssp CHHHHHHHHTTTCSEEEEECCSTTTCCCTTHHHHHHHHC-----CSCEEEESCCCSHH-HHHHHHHTTCSEEEEETTTCC
T ss_pred CHHHHHHHHHhhCcEEEEEecccccCCCHHHHHHHHHhc-----CCCeEEEeccCCHH-HHHHHHHcCCCEEEEEcccCC
Confidence 677788888888888888 5668999999999865 56777762112222 35553333 798877655444
Q ss_pred ccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 315 VATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 315 ~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
. .--++++..|+..|..+++ |+.+. .++..|...|+|.+-.+
T Consensus 143 ----~----~~l~~l~~~a~~lgm~~Lv-----------Evh~~-----eE~~~A~~lga~iIGin 184 (452)
T 1pii_A 143 ----D----DQYRQLAAVAHSLEMGVLT-----------EVSNE-----EEQERAIALGAKVVGIN 184 (452)
T ss_dssp ----H----HHHHHHHHHHHHTTCEEEE-----------EECSH-----HHHHHHHHTTCSEEEEE
T ss_pred ----H----HHHHHHHHHHHHcCCeEEE-----------EeCCH-----HHHHHHHHCCCCEEEEe
Confidence 1 2345688889999999997 33222 55577888899998886
No 407
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=35.66 E-value=1.4e+02 Score=29.44 Aligned_cols=84 Identities=15% Similarity=0.103 Sum_probs=51.2
Q ss_pred cCEEEEcCCcc--cccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEee
Q psy6272 303 SDGVVLNRIQL--AVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVL 379 (547)
Q Consensus 303 ~DgImIargDL--g~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmL 379 (547)
+|||++. |=- +..+..++-..+-+..++.++. ..||+..+. ..+-.|. -+.+ .|-..|+|++|+
T Consensus 35 v~gi~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-rvpviaGvg---~~~t~~a--------i~la~~A~~~Gadavlv 101 (297)
T 2rfg_A 35 AHGLVPV-GTTGESPTLTEEEHKRVVALVAEQAQG-RVPVIAGAG---SNNPVEA--------VRYAQHAQQAGADAVLC 101 (297)
T ss_dssp CSEEECS-SGGGTGGGSCHHHHHHHHHHHHHHHTT-SSCBEEECC---CSSHHHH--------HHHHHHHHHHTCSEEEE
T ss_pred CCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhCC-CCeEEEccC---CCCHHHH--------HHHHHHHHhcCCCEEEE
Confidence 6999876 322 2234445444444545555432 489998776 4444555 4444 344569999999
Q ss_pred CCcchHH-----HHHHHHHHHHHHhh
Q psy6272 380 TQSEQAH-----HRVDILKEILKKTE 400 (547)
Q Consensus 380 sk~Eta~-----eaV~~m~~I~~~aE 400 (547)
. .+.-. +.++....|+..+.
T Consensus 102 ~-~P~y~~~s~~~l~~~f~~va~a~~ 126 (297)
T 2rfg_A 102 V-AGYYNRPSQEGLYQHFKMVHDAID 126 (297)
T ss_dssp C-CCTTTCCCHHHHHHHHHHHHHHCS
T ss_pred c-CCCCCCCCHHHHHHHHHHHHHhcC
Confidence 7 55432 77778888877664
No 408
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=35.62 E-value=1.6e+02 Score=24.18 Aligned_cols=72 Identities=8% Similarity=-0.053 Sum_probs=41.8
Q ss_pred cCCcEEEEEc-----CCchH-HHHHHhcCCCCCEEEEeCchhcccc-ccccccceEEeecCCCCCCCCCCHHHHHHHHHH
Q psy6272 437 CQAVAIIVIT-----CSGYS-AKLVSKYRPQCPILAVSSLGYVCRH-LNVYRNIRPLHYIRNPQADWSMDVDCRVQFAIQ 509 (547)
Q Consensus 437 ~~a~aIvv~T-----~sG~t-A~~isk~RP~~pIiavt~~~~~ar~-l~l~~GV~p~~~~~~~~~~~~~d~d~~I~~a~~ 509 (547)
...+.|++-. .+|.. ++.+.++ |.+|||.+|........ -.+..|+.-++.++.. .+.....++.+++
T Consensus 49 ~~~dlvi~D~~l~~~~~g~~~~~~l~~~-~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~----~~~l~~~i~~~l~ 123 (140)
T 3h5i_A 49 WYPDLILMDIELGEGMDGVQTALAIQQI-SELPVVFLTAHTEPAVVEKIRSVTAYGYVMKSAT----EQVLITIVEMALR 123 (140)
T ss_dssp CCCSEEEEESSCSSSCCHHHHHHHHHHH-CCCCEEEEESSSSCCCCGGGGGSCEEEEEETTCC----HHHHHHHHHHHHH
T ss_pred CCCCEEEEeccCCCCCCHHHHHHHHHhC-CCCCEEEEECCCCHHHHHHHHhCCCcEEEeCCCC----HHHHHHHHHHHHH
Confidence 5678777643 34432 3344444 99999999997665433 3344589888887531 1233344555555
Q ss_pred HHHH
Q psy6272 510 HGME 513 (547)
Q Consensus 510 ~~k~ 513 (547)
..++
T Consensus 124 ~~~~ 127 (140)
T 3h5i_A 124 LYEA 127 (140)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 4443
No 409
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=35.52 E-value=2.1e+02 Score=27.42 Aligned_cols=41 Identities=17% Similarity=0.199 Sum_probs=30.4
Q ss_pred HHHHHHHHHcCCcEEEEcccC------ChhhHHHHHHHHHhcCCCce
Q psy6272 242 KHVVDLIVREAVDIIIMSSVT------GANSIREMRGMLEDHVDRVL 282 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~------sa~di~~~r~~l~~~~~~i~ 282 (547)
.+.++.+.+.|+|+|-+.+-. +..++.++++.+++.|-.+.
T Consensus 39 ~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~ 85 (296)
T 2g0w_A 39 PKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVT 85 (296)
T ss_dssp HHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceE
Confidence 445789999999999987632 34678888888887764433
No 410
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=35.34 E-value=2.8e+02 Score=27.63 Aligned_cols=100 Identities=15% Similarity=0.177 Sum_probs=65.5
Q ss_pred HHcCCcEEEEcccCC--------------hhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCccc
Q psy6272 249 VREAVDIIIMSSVTG--------------ANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLA 314 (547)
Q Consensus 249 ~~~g~d~I~~sfV~s--------------a~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg 314 (547)
.+.|+.+|+-+..+. .+.++.++++..+. .+.+++-+-..+.++-+.+ .+|.+-||-+++-
T Consensus 45 ~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~--Glp~~tev~d~~~v~~l~~---~vd~lkIgA~~~~ 119 (288)
T 3tml_A 45 EKLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQL--GLPVLTDVHSIDEIEQVAS---VVDVLQTPAFLCR 119 (288)
T ss_dssp HHHTCCEEEECBC--------------CHHHHHHHHHHHHHHH--CCCEEEECCSGGGHHHHHH---HCSEEEECGGGTT
T ss_pred HHcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--CCeEEEEeCCHHHHHHHHH---hCCEEEECccccc
Confidence 345899898754442 25566677777554 5788888888888877655 4899999976655
Q ss_pred ccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHh-Cc
Q psy6272 315 VATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQD-GA 374 (547)
Q Consensus 315 ~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~-g~ 374 (547)
- .+ .++.+-+.||||++.|.|. .|-.|+ ..++..+.. |.
T Consensus 120 n------~~-----LLr~~a~~gkPVilK~G~~--~t~~e~--------~~ave~i~~~Gn 159 (288)
T 3tml_A 120 Q------TD-----FIHACARSGKPVNIKKGQF--LAPHDM--------KNVIDKARDAAR 159 (288)
T ss_dssp C------HH-----HHHHHHTSSSCEEEECCTT--CCTTHH--------HHHHHHHHHHHH
T ss_pred C------HH-----HHHHHHccCCcEEEeCCCC--CCHHHH--------HHHHHHHHHcCC
Confidence 2 22 2344558899999999873 233355 555555543 54
No 411
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=35.25 E-value=2.7e+02 Score=25.73 Aligned_cols=84 Identities=14% Similarity=0.236 Sum_probs=42.7
Q ss_pred EEEEcccCCh---hhHHHHHHHHHhcCCCceEEEEecCHHH-HhhHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHH
Q psy6272 255 IIIMSSVTGA---NSIREMRGMLEDHVDRVLILAKIETLLG-MEYMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMI 329 (547)
Q Consensus 255 ~I~~sfV~sa---~di~~~r~~l~~~~~~i~IiakIEt~~a-v~nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~i 329 (547)
++++|...+. +-++.+.+.+.+.|-++.++.-=++.+. .+.++.++.. .|||++.+.+-...-.. ...
T Consensus 19 gvi~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~-------~~~ 91 (298)
T 3tb6_A 19 GVLTTYISDYIFPSIIRGIESYLSEQGYSMLLTSTNNNPDNERRGLENLLSQHIDGLIVEPTKSALQTPN-------IGY 91 (298)
T ss_dssp EEEESCSSSTTHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHTCCSEEEECCSSTTSCCTT-------HHH
T ss_pred EEEeCCCCchHHHHHHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHHHHHCCCCEEEEecccccccCCc-------HHH
Confidence 3444444433 2233344455555554444322122222 2334444433 79999988765422111 124
Q ss_pred HHHHHHcCCcEEEEcC
Q psy6272 330 AARCNKQGKPFLVVGD 345 (547)
Q Consensus 330 i~~c~~~gKPvi~aTq 345 (547)
+..++++|+|+++...
T Consensus 92 ~~~~~~~~iPvV~~~~ 107 (298)
T 3tb6_A 92 YLNLEKNGIPFAMINA 107 (298)
T ss_dssp HHHHHHTTCCEEEESS
T ss_pred HHHHHhcCCCEEEEec
Confidence 4567789999998654
No 412
>3tfx_A Orotidine 5'-phosphate decarboxylase; PSI-biology, nysgrc, 000529, structural genomics, NEW YORK S genomics research consortium; 2.19A {Lactobacillus acidophilus}
Probab=35.23 E-value=99 Score=30.42 Aligned_cols=76 Identities=13% Similarity=0.114 Sum_probs=48.2
Q ss_pred HHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEE-EEecCHHH--------HhhHHHHHhh-cCEEEEcCCc
Q psy6272 243 HVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLIL-AKIETLLG--------MEYMDEIIME-SDGVVLNRIQ 312 (547)
Q Consensus 243 ~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~Ii-akIEt~~a--------v~nldeIl~~-~DgImIargD 312 (547)
+..+.+.+.|+|+|++| ++++..+|+.++ .+..++ .-|- +++ +.+..+.++. +|.+++||+=
T Consensus 148 ~~A~~a~~~G~dGvV~s----~~e~~~ir~~~~---~~f~~vtPGIr-~~g~~~gDQ~Rv~T~~~a~~aGad~iVvGr~I 219 (259)
T 3tfx_A 148 SLAKMAKHSGADGVICS----PLEVKKLHENIG---DDFLYVTPGIR-PAGNAKDDQSRVATPKMAKEWGSSAIVVGRPI 219 (259)
T ss_dssp HHHHHHHHTTCCEEECC----GGGHHHHHHHHC---SSSEEEECCCC-CC-----------CHHHHHHTTCSEEEECHHH
T ss_pred HHHHHHHHhCCCEEEEC----HHHHHHHHhhcC---CccEEEcCCcC-CCCCCcCCccccCCHHHHHHcCCCEEEEChHH
Confidence 33456677899999987 788999998774 343333 3332 122 3357777766 8999999987
Q ss_pred ccccCChHHHHHHH
Q psy6272 313 LAVATSVEVTFLAQ 326 (547)
Q Consensus 313 Lg~e~~~e~v~~~q 326 (547)
+..+=|.+.+..+.
T Consensus 220 ~~a~dp~~a~~~i~ 233 (259)
T 3tfx_A 220 TLASDPKAAYEAIK 233 (259)
T ss_dssp HTSSSHHHHHHHHH
T ss_pred hCCCCHHHHHHHHH
Confidence 76654444443333
No 413
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=35.17 E-value=3.5e+02 Score=27.29 Aligned_cols=124 Identities=13% Similarity=0.192 Sum_probs=77.1
Q ss_pred CCCChhh-HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcc
Q psy6272 235 PVIADRD-KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQL 313 (547)
Q Consensus 235 p~lt~~D-~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDL 313 (547)
|.++..+ .+.++.|.+.|. .|..-.|.+.+.++.+.+..++. +..+|.++ ++.+.+.... .
T Consensus 8 ~~~~~n~~~~ll~~A~~~~y-AV~AfNv~n~e~~~Avl~AAee~--~sPvIlq~-s~g~~~y~g~-------------~- 69 (306)
T 3pm6_A 8 PSLKSNRALPLLTFARTHSF-AIPAICVYNLEGILAIIRAAEHK--RSPAMILL-FPWAIQYADS-------------L- 69 (306)
T ss_dssp --CTTCSSHHHHHHHHHTTC-CEEEEECSSHHHHHHHHHHHHHT--TCCEEEEE-CHHHHHHHTT-------------H-
T ss_pred CCCCccHHHHHHHHHHHCCc-EEEEEeeCCHHHHHHHHHHHHHh--CCCEEEEc-ChhHHhhccH-------------H-
Confidence 5566655 444567777665 46666678888888888877665 45566676 3444443211 0
Q ss_pred cccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHh--------CccEEeeCCcchH
Q psy6272 314 AVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQD--------GADVVVLTQSEQA 385 (547)
Q Consensus 314 g~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~--------g~D~vmLsk~Eta 385 (547)
.-..+...++++++||.+.+. .-. .. .++..++.. |++.+|+.-+.--
T Consensus 70 -----------~~~~~~~~A~~~~VPVaLHlD---Hg~--~~--------e~i~~ai~~~~~~~~~~GFtSVMiDgS~~p 125 (306)
T 3pm6_A 70 -----------LVRTAASACRAASVPITLHLD---HAQ--DP--------EIIKRAADLSRSETHEPGFDSIMVDMSHFS 125 (306)
T ss_dssp -----------HHHHHHHHHHHCSSCEEEEEE---EEC--CH--------HHHHHHHHTC------CCCSEEEECCTTSC
T ss_pred -----------HHHHHHHHHHHCCCCEEEEcC---CCC--CH--------HHHHHHHHhhhhccCCCCCCEEEEeCCCCC
Confidence 113355678889999998653 111 23 667889988 9999999622222
Q ss_pred H-HHHHHHHHHHHHhh
Q psy6272 386 H-HRVDILKEILKKTE 400 (547)
Q Consensus 386 ~-eaV~~m~~I~~~aE 400 (547)
. |-|+.-.++++.+-
T Consensus 126 ~eENi~~Tk~vv~~ah 141 (306)
T 3pm6_A 126 KEENLRLTRELVAYCN 141 (306)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 2 66776666666653
No 414
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=35.06 E-value=2.6e+02 Score=26.01 Aligned_cols=101 Identities=12% Similarity=0.032 Sum_probs=59.0
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh----cCEEEEcCCcccccC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME----SDGVVLNRIQLAVAT 317 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~----~DgImIargDLg~e~ 317 (547)
.++++.+++.|+|+|..|. .+. ++.+.+..+ + +.++.-+.| ..|+..+ +|.|-+-++. .+
T Consensus 73 ~d~~~~A~~~GAd~v~~~~-~d~-~v~~~~~~~---g--~~~i~G~~t------~~e~~~A~~~Gad~v~~fpa~---~~ 136 (207)
T 2yw3_A 73 PKEAEAALEAGAAFLVSPG-LLE-EVAALAQAR---G--VPYLPGVLT------PTEVERALALGLSALKFFPAE---PF 136 (207)
T ss_dssp HHHHHHHHHHTCSEEEESS-CCH-HHHHHHHHH---T--CCEEEEECS------HHHHHHHHHTTCCEEEETTTT---TT
T ss_pred HHHHHHHHHcCCCEEEcCC-CCH-HHHHHHHHh---C--CCEEecCCC------HHHHHHHHHCCCCEEEEecCc---cc
Confidence 3678899999999999884 333 333333323 2 233434444 3444333 7999885522 12
Q ss_pred -ChHHHHHHHHHHHHHHHHc-CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 318 -SVEVTFLAQKMIAARCNKQ-GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 318 -~~e~v~~~qk~ii~~c~~~-gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
|++.+. +.+... +.|++-...+ .. .++..++..|+|++...
T Consensus 137 gG~~~lk-------~l~~~~~~ipvvaiGGI-------~~--------~n~~~~l~aGa~~vavg 179 (207)
T 2yw3_A 137 QGVRVLR-------AYAEVFPEVRFLPTGGI-------KE--------EHLPHYAALPNLLAVGG 179 (207)
T ss_dssp THHHHHH-------HHHHHCTTCEEEEBSSC-------CG--------GGHHHHHTCSSBSCEEE
T ss_pred cCHHHHH-------HHHhhCCCCcEEEeCCC-------CH--------HHHHHHHhCCCcEEEEe
Confidence 332222 223334 7898765543 12 66777888899999887
No 415
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=34.95 E-value=3.8e+02 Score=27.32 Aligned_cols=38 Identities=11% Similarity=0.184 Sum_probs=31.6
Q ss_pred hhHHHHHHhCccEEeeCCcchHH----HHHHHHHHHHHHhhhh
Q psy6272 364 NDVNSIVQDGADVVVLTQSEQAH----HRVDILKEILKKTESV 402 (547)
Q Consensus 364 ~Dv~nav~~g~D~vmLsk~Eta~----eaV~~m~~I~~~aE~~ 402 (547)
.+....+..|+|.+-.. ||.-. |+|+-|+.|-.++...
T Consensus 132 gea~r~~~~Ga~~i~t~-ge~g~~~~ve~v~H~r~~~~~~~~~ 173 (330)
T 2yzr_A 132 GEAVRRIWEGAAMIRTK-GEAGTGNIVEAVRHMRLMNEAIAQL 173 (330)
T ss_dssp HHHHHHHHHTCSEEEEC-CCTTSCCTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCcceeecc-CCCCcccchhHHHHHHHHHHHHHHh
Confidence 78888889999999998 97554 9999999887777653
No 416
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=34.93 E-value=58 Score=27.18 Aligned_cols=44 Identities=11% Similarity=-0.021 Sum_probs=32.7
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCC------chHHHHHHhcCCCCCEEEEeCc
Q psy6272 426 IVIACVNAALKCQAVAIIVITCS------GYSAKLVSKYRPQCPILAVSSL 470 (547)
Q Consensus 426 ia~aav~~a~~~~a~aIvv~T~s------G~tA~~isk~RP~~pIiavt~~ 470 (547)
.+...++.|.+.+++.||+-+.. |.++..+.+.= +|||+.+-+.
T Consensus 90 ~~~~I~~~a~~~~~dliV~G~~~~~~~~lgs~~~~vl~~~-~~pVlvv~~~ 139 (141)
T 1jmv_A 90 LGQVLSDAIEQYDVDLLVTGHHQDFWSKLMSSTRQVMNTI-KIDMLVVPLR 139 (141)
T ss_dssp HHHHHHHHHHHTTCCEEEEEECCCCHHHHHHHHHHHHTTC-CSEEEEEECC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCchhhhhcchHHHHHhcC-CCCEEEeeCC
Confidence 56667788889999999998762 34566666654 5999998654
No 417
>3kw2_A Probable R-RNA methyltransferase; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE ADN; 2.00A {Porphyromonas gingivalis atcc 33277}
Probab=34.81 E-value=99 Score=30.26 Aligned_cols=72 Identities=13% Similarity=0.149 Sum_probs=42.9
Q ss_pred ccCCCCEEEEec----eeEEEEEEEeCCeEEEEEEeCcEeCCCceeeeCCCCc--CCCCCChhhHHHHHHHHHcCCcEEE
Q psy6272 184 RVIPDDIVYIDR----NIKLKVVEKENNDVHCTVIRGGKLMDNQLVTVPRVTF--NLPVIADRDKHVVDLIVREAVDIII 257 (547)
Q Consensus 184 ~v~~Gd~I~idD----~I~l~V~~v~~~~v~~~V~~gG~L~s~Kginlp~~~~--~lp~lt~~D~~di~~~~~~g~d~I~ 257 (547)
.+++||.|.+-| .-..+|.+++++.+.+++..--........ ...+ -+|.-.++-...|+.+.+.|++-|.
T Consensus 32 Rl~~Gd~v~l~dg~g~~~~a~I~~i~~~~~~~~i~~~~~~~~e~~~---~i~L~~al~K~~dr~d~iiqKatELGV~~I~ 108 (257)
T 3kw2_A 32 RMQAGDRLRLTDGRGSFFDAVIETADRKSCYVSVCGQESWQKPWRD---RITIAIAPTKQSERMEWMLEKLVEIGVDEVV 108 (257)
T ss_dssp CCCTTCEEEEECSBSEEEEEEEEEECSSCEEEEEEEEEECCCSSCS---CEEEEECCCSSHHHHHHHHHHHHHHCCSEEE
T ss_pred cCCCCCEEEEEECCCCEEEEEEEEeeCCEEEEEEEEecccCCCCCC---ceEEEEecCCCcchHHHHHHHHHhhCCCEEE
Confidence 467899998865 456788889999888887642221111111 1122 1222123334457899999999765
Q ss_pred E
Q psy6272 258 M 258 (547)
Q Consensus 258 ~ 258 (547)
.
T Consensus 109 p 109 (257)
T 3kw2_A 109 F 109 (257)
T ss_dssp E
T ss_pred E
Confidence 3
No 418
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=34.75 E-value=59 Score=32.16 Aligned_cols=46 Identities=26% Similarity=0.258 Sum_probs=35.1
Q ss_pred HHhhHHHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEE
Q psy6272 292 GMEYMDEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 292 av~nldeIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~ 342 (547)
+.+-.+|+.+.+|++.|..|-|. ++........++.++++|||+++
T Consensus 46 ~~~E~~e~~~~a~al~iNiGtl~-----~~~~~~m~~A~~~A~~~~~PvVL 91 (265)
T 3hpd_A 46 AEEELEEMIRLADAVVINIGTLD-----SGWRRSMVKATEIANELGKPIVL 91 (265)
T ss_dssp CTTTHHHHHHHCSEEEEECTTCC-----HHHHHHHHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHCCeEEEECCCCC-----hHHHHHHHHHHHHHHHcCCCEEE
Confidence 44578889999999999988765 23334444567889999999998
No 419
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=34.59 E-value=1.7e+02 Score=28.79 Aligned_cols=142 Identities=18% Similarity=0.159 Sum_probs=79.2
Q ss_pred CCCChhhHHH-HHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh--------cCE
Q psy6272 235 PVIADRDKHV-VDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME--------SDG 305 (547)
Q Consensus 235 p~lt~~D~~d-i~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~--------~Dg 305 (547)
|..|..|+.. +..|.++|+..|+++ +.-+..+++.|. +..++|.+=|=-+.|-...+.-+.. +|.
T Consensus 54 p~~t~~~I~~lc~eA~~~~~aaVCV~----p~~V~~a~~~L~--gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~GAdE 127 (260)
T 3r12_A 54 PFATPDDIKKLCLEARENRFHGVCVN----PCYVKLAREELE--GTDVKVVTVVGFPLGANETRTKAHEAIFAVESGADE 127 (260)
T ss_dssp TTCCHHHHHHHHHHHHHTTCSEEEEC----GGGHHHHHHHHT--TSCCEEEEEESTTTCCSCHHHHHHHHHHHHHHTCSE
T ss_pred CCCCHHHHHHHHHHHHhcCCcEEEEC----HHHHHHHHHHhc--CCCCeEEEEecCCCCCCcHHHHHHHHHHHHHcCCCE
Confidence 5667788755 478899999999985 567888888884 4567777766545444322222211 343
Q ss_pred E--EEcCCcccccCChHHHHHHHHHHHHHHHHcCCc--EEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEeeC
Q psy6272 306 V--VLNRIQLAVATSVEVTFLAQKMIAARCNKQGKP--FLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVLT 380 (547)
Q Consensus 306 I--mIargDLg~e~~~e~v~~~qk~ii~~c~~~gKP--vi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmLs 380 (547)
| .|..|.|- +=.++.+..-.+.+.+.|. |+| ||+-|-.| |..|+ ..+. -+...|+|.|=-|
T Consensus 128 IDmViNig~lk-~g~~~~v~~eI~~v~~a~~--~~~lKVIlEt~~L---t~eei--------~~A~~ia~eaGADfVKTS 193 (260)
T 3r12_A 128 IDMVINVGMLK-AKEWEYVYEDIRSVVESVK--GKVVKVIIETCYL---DTEEK--------IAACVISKLAGAHFVKTS 193 (260)
T ss_dssp EEEECCHHHHH-TTCHHHHHHHHHHHHHHTT--TSEEEEECCGGGC---CHHHH--------HHHHHHHHHTTCSEEECC
T ss_pred EEEEeehhhhc-cccHHHHHHHHHHHHHhcC--CCcEEEEEeCCCC---CHHHH--------HHHHHHHHHhCcCEEEcC
Confidence 3 12222210 0012334444444555553 455 34434333 44455 3333 2456799999776
Q ss_pred Cc----chHHHHHHHHHHHH
Q psy6272 381 QS----EQAHHRVDILKEIL 396 (547)
Q Consensus 381 k~----Eta~eaV~~m~~I~ 396 (547)
-| -...+.|+.|.+.+
T Consensus 194 TGf~~~GAT~edV~lm~~~v 213 (260)
T 3r12_A 194 TGFGTGGATAEDVHLMKWIV 213 (260)
T ss_dssp CSSSSCCCCHHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHh
Confidence 22 12238999998864
No 420
>3elf_A Fructose-bisphosphate aldolase; zinc enzyme, dihydroxyacetone, glyceraldehyd phosphate, aldol condensation, glycolysis, lyase; HET: 2FP; 1.31A {Mycobacterium tuberculosis} PDB: 3ekz_A* 3ekl_A* 4a22_A* 4a21_A*
Probab=34.47 E-value=3.1e+02 Score=28.21 Aligned_cols=144 Identities=10% Similarity=0.051 Sum_probs=75.8
Q ss_pred CCCCChhhHHH-HHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCc
Q psy6272 234 LPVIADRDKHV-VDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQ 312 (547)
Q Consensus 234 lp~lt~~D~~d-i~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargD 312 (547)
+|.+|..+..+ ++.|.+.|. .|..-.|.+.+.++.+.+..++.+ ..+|.++ ++.+.+....
T Consensus 1 Mp~~~~~~~~~ll~~A~~~~y-AV~AfNv~n~e~~~Avl~AAee~~--sPvIlq~-s~g~~~y~~g-------------- 62 (349)
T 3elf_A 1 MPIATPEVYAEMLGQAKQNSY-AFPAINCTSSETVNAAIKGFADAG--SDGIIQF-STGGAEFGSG-------------- 62 (349)
T ss_dssp -CBCCHHHHHHHHHHHHHTTC-CEEEEECCSHHHHHHHHHHHHHTT--CCEEEEE-CHHHHHHHHC--------------
T ss_pred CceecHHHHHHHHHHHHHcCc-eEEEEeeCCHHHHHHHHHHHHHhC--CCEEEEc-ChhHHhhcCc--------------
Confidence 36677766555 456666655 566666788888888888777653 5666676 3444433210
Q ss_pred ccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCcc-----chhhHHHHHHhCccEEeeCCcchH-H
Q psy6272 313 LAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIG-----DMNDVNSIVQDGADVVVLTQSEQA-H 386 (547)
Q Consensus 313 Lg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~-----~~~Dv~nav~~g~D~vmLsk~Eta-~ 386 (547)
.++.--..-...+-..+...++++++||.+.+. .-...+.-++ +. ....+..++..|++.+|+. +-.. .
T Consensus 63 ~~~~~~v~g~~~~a~~v~~~A~~~~VPVaLHlD---Hg~~~~ld~~-~~~~l~~~~~~i~~~i~~GFtSVMiD-gS~lp~ 137 (349)
T 3elf_A 63 LGVKDMVTGAVALAEFTHVIAAKYPVNVALHTD---HCPKDKLDSY-VRPLLAISAQRVSKGGNPLFQSHMWD-GSAVPI 137 (349)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHTTSSSCEEEEEC---CCCGGGGGGT-HHHHHHHHHHHHHTTCCCSCSEEEEC-CTTSCH
T ss_pred chhhhhhhhHHHHHHHHHHHHHHCCCCEEEECC---CCCCcccchh-hhhhHHHHHHHHHHHhhcCCCEEEec-CCCCCH
Confidence 000000001123344566777889999998653 2221111000 00 0022334444569999996 3222 2
Q ss_pred -HHHHHHHHHHHHhh
Q psy6272 387 -HRVDILKEILKKTE 400 (547)
Q Consensus 387 -eaV~~m~~I~~~aE 400 (547)
|-|+.-.++++.+-
T Consensus 138 eENi~~Tk~vv~~ah 152 (349)
T 3elf_A 138 DENLAIAQELLKAAA 152 (349)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 66666666655553
No 421
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=34.41 E-value=35 Score=35.56 Aligned_cols=88 Identities=15% Similarity=0.179 Sum_probs=59.4
Q ss_pred hhhHHHHHHHHHc-CCcEEEEcc-------cCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcC
Q psy6272 239 DRDKHVVDLIVRE-AVDIIIMSS-------VTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNR 310 (547)
Q Consensus 239 ~~D~~di~~~~~~-g~d~I~~sf-------V~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIar 310 (547)
+.|...|+.+.+. |+++|-++. +-+.+++.++++.+++.|-.+.. +|+. .--++|.. +.
T Consensus 30 ~~d~~~L~~i~q~~G~~gIe~~l~~~~~g~~w~~~~i~~lk~~l~~~GL~i~~---i~s~---~~~~~i~~-------~~ 96 (386)
T 3bdk_A 30 KKDPVTLEEIKAIPGMQGIVTAVYDVPVGQAWPLENILELKKMVEEAGLEITV---IESI---PVHEDIKQ-------GK 96 (386)
T ss_dssp TTCSSCHHHHHTSTTCCEEEECCCSSCSSSCCCHHHHHHHHHHHHTTTCEEEE---EECC---CCCHHHHT-------TC
T ss_pred CCCHHHHHHHHhcCCCCEEEeCCcccCCCCCCCHHHHHHHHHHHHHcCCEEEE---Eecc---cccccccc-------Cc
Confidence 3555578889999 999998773 44668999999999987654433 3431 11112221 11
Q ss_pred CcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcC
Q psy6272 311 IQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGD 345 (547)
Q Consensus 311 gDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq 345 (547)
. ..++....-++.|+.|.++|.++++.+.
T Consensus 97 ~------~r~~~ie~~k~~i~~aa~lGi~~v~~nf 125 (386)
T 3bdk_A 97 P------NRDALIENYKTSIRNVGAAGIPVVCYNF 125 (386)
T ss_dssp T------THHHHHHHHHHHHHHHHTTTCCEEEECC
T ss_pred H------HHHHHHHHHHHHHHHHHHcCCCEEEEcC
Confidence 1 1455666777899999999999998644
No 422
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=34.31 E-value=69 Score=32.13 Aligned_cols=72 Identities=10% Similarity=0.088 Sum_probs=48.1
Q ss_pred HHHHHHHcCCcEEEEccc----CChhhHHHHHHHHHhc-CCC-ceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccc
Q psy6272 244 VVDLIVREAVDIIIMSSV----TGANSIREMRGMLEDH-VDR-VLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAV 315 (547)
Q Consensus 244 di~~~~~~g~d~I~~sfV----~sa~di~~~r~~l~~~-~~~-i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~ 315 (547)
..+.+.+.|+|+|-+... .+.+++.++.+..... +.. +.+..-+-..+-++++.+.+.. ++|+.+||.=+.-
T Consensus 182 aa~~a~~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~~~~~~~~~~~~a~~aGa~Gv~vGRaI~q~ 260 (304)
T 1to3_A 182 AAKELGDSGADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSS 260 (304)
T ss_dssp HHHHHTTSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHGG
T ss_pred HHHHHHHcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEecCCCHHHHHHHHHHHHHcCCeEEEEehHHhCc
Confidence 367788899999999984 4556666666654432 222 3333344333456778888776 7999999987755
No 423
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=34.30 E-value=67 Score=31.08 Aligned_cols=42 Identities=10% Similarity=0.185 Sum_probs=27.5
Q ss_pred hhHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcC
Q psy6272 294 EYMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGD 345 (547)
Q Consensus 294 ~nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq 345 (547)
+.++.++.. .|||++.+.|... -..+++.++++|+||++...
T Consensus 51 ~~i~~li~~~vdgiii~~~~~~~----------~~~~~~~a~~~gipvV~~d~ 93 (316)
T 1tjy_A 51 QLVNNFVNQGYDAIIVSAVSPDG----------LCPALKRAMQRGVKILTWDS 93 (316)
T ss_dssp HHHHHHHHTTCSEEEECCSSSST----------THHHHHHHHHTTCEEEEESS
T ss_pred HHHHHHHHcCCCEEEEeCCCHHH----------HHHHHHHHHHCcCEEEEecC
Confidence 345555543 7999999876542 11245667889999998643
No 424
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=34.21 E-value=1.2e+02 Score=30.79 Aligned_cols=23 Identities=4% Similarity=0.050 Sum_probs=18.4
Q ss_pred CCChhhHHHH--------HHHHHcCCcEEEE
Q psy6272 236 VIADRDKHVV--------DLIVREAVDIIIM 258 (547)
Q Consensus 236 ~lt~~D~~di--------~~~~~~g~d~I~~ 258 (547)
.||..|++.+ ++|.+.|+|+|-+
T Consensus 141 ~mt~~eI~~ii~~F~~AA~rA~~AGFDgVEI 171 (358)
T 4a3u_A 141 ALRLDEIPRLLDDYEKAARHALKAGFDGVQI 171 (358)
T ss_dssp ECCGGGHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCeEee
Confidence 4677777766 5788999999987
No 425
>4e8b_A Ribosomal RNA small subunit methyltransferase E; 16S rRNA methyltransferase; 2.25A {Escherichia coli}
Probab=34.16 E-value=1.2e+02 Score=29.53 Aligned_cols=72 Identities=10% Similarity=0.136 Sum_probs=45.6
Q ss_pred cccCCCCEEEEec----eeEEEEEEEeCCeEEEEEEeCcEeCCCc--eeeeCCCCcCCCCCChhhHHHHHHHHHcCCcEE
Q psy6272 183 KRVIPDDIVYIDR----NIKLKVVEKENNDVHCTVIRGGKLMDNQ--LVTVPRVTFNLPVIADRDKHVVDLIVREAVDII 256 (547)
Q Consensus 183 ~~v~~Gd~I~idD----~I~l~V~~v~~~~v~~~V~~gG~L~s~K--ginlp~~~~~lp~lt~~D~~di~~~~~~g~d~I 256 (547)
-.+++||.|.+-| ....+|.+++++.+.+++...-...... .+.+ ...+|. .++-...|+.+.+.|++-|
T Consensus 32 LR~~~Gd~v~l~dg~g~~~~a~I~~i~~~~~~~~i~~~~~~~~e~~~~v~L---~~al~K-~~r~e~ilqkatELGv~~I 107 (251)
T 4e8b_A 32 LRMGPGQALQLFDGSNQVFDAEITSASKKSVEVKVLEGQIDDRESPLHIHL---GQVMSR-GEKMEFTIQKSIELGVSLI 107 (251)
T ss_dssp SCCCSCCEEEEECSSSEEEEEEEEEECSSCEEEEEEEEEECCCCCSSEEEE---EEECCS-SSHHHHHHHHHHHTTCCEE
T ss_pred CcCCCCCEEEEEeCCCcEEEEEEEEeecceEEEEEeeeecCCCCCCceEEE---EEEeec-hhHHHHHHHHHHhhCCCEE
Confidence 3478999998765 5678899999999988886422221111 1111 112322 3344456789999999987
Q ss_pred EE
Q psy6272 257 IM 258 (547)
Q Consensus 257 ~~ 258 (547)
..
T Consensus 108 ~p 109 (251)
T 4e8b_A 108 TP 109 (251)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 426
>1kzl_A Riboflavin synthase; biosynthesis of riboflavin, ligand binding, transferase; HET: CRM; 2.10A {Schizosaccharomyces pombe} SCOP: b.43.4.3 b.43.4.3
Probab=34.13 E-value=59 Score=31.15 Aligned_cols=56 Identities=11% Similarity=0.169 Sum_probs=45.1
Q ss_pred EEEecCCCcccccCCCCEEEEeceeEEEEEEEeCCeEEEEEE-------eCcEeCCCceeeeCC
Q psy6272 173 RLFVDSMELPKRVIPDDIVYIDRNIKLKVVEKENNDVHCTVI-------RGGKLMDNQLVTVPR 229 (547)
Q Consensus 173 ~i~v~~~~~~~~v~~Gd~I~idD~I~l~V~~v~~~~v~~~V~-------~gG~L~s~Kginlp~ 229 (547)
.+.+..+.+.+.+.+||.|-+|- ++|.|.+++++.+.+-+. +=|.++....|||-.
T Consensus 24 ~l~i~~~~~~~~l~~g~SIAvnG-vcLTV~~~~~~~F~vdvipETl~~T~Lg~l~~Gd~VNLEr 86 (208)
T 1kzl_A 24 AMKIEAPQILDDCHTGDSIAVNG-TCLTVTDFDRYHFTVGIAPESLRLTNLGQCKAGDPVNLER 86 (208)
T ss_dssp EEEEECGGGCTTCCTTCEEEETT-EEEEEEEECSSEEEEEECHHHHHHSSGGGCCTTCEEEEEE
T ss_pred EEEEechHHhcccCCCCEEEECC-EEeeEEEEcCCEEEEEEeHHHHhhccccccCCCCEEEecc
Confidence 34454445778999999999998 888999999998888773 667888888999853
No 427
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=34.12 E-value=1.9e+02 Score=26.85 Aligned_cols=65 Identities=14% Similarity=0.147 Sum_probs=35.7
Q ss_pred HHHHHHHHhcCCCceEEEEecCHHH-HhhHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcC
Q psy6272 268 REMRGMLEDHVDRVLILAKIETLLG-MEYMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGD 345 (547)
Q Consensus 268 ~~~r~~l~~~~~~i~IiakIEt~~a-v~nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq 345 (547)
..+.+.+.+.|-++.+..-=++.+. .+.++.++.- .|||++.+.+. ...+..+.+.|+|+++...
T Consensus 27 ~gi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~-------------~~~~~~l~~~~iPvV~i~~ 93 (276)
T 3jy6_A 27 KGISSILESRGYIGVLFDANADIEREKTLLRAIGSRGFDGLILQSFSN-------------PQTVQEILHQQMPVVSVDR 93 (276)
T ss_dssp HHHHHHHHTTTCEEEEEECTTCHHHHHHHHHHHHTTTCSEEEEESSCC-------------HHHHHHHHTTSSCEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHHHHhCCCCEEEEecCCc-------------HHHHHHHHHCCCCEEEEec
Confidence 3344455555555444332122222 1233333333 79999987664 2355667889999988644
No 428
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=34.05 E-value=2.2e+02 Score=34.88 Aligned_cols=118 Identities=8% Similarity=0.025 Sum_probs=68.0
Q ss_pred HHHcCCcEEEEc---ccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhh-HHHHHhh-cCEEEEcCCcccc-------
Q psy6272 248 IVREAVDIIIMS---SVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEY-MDEIIME-SDGVVLNRIQLAV------- 315 (547)
Q Consensus 248 ~~~~g~d~I~~s---fV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~n-ldeIl~~-~DgImIargDLg~------- 315 (547)
.+..|++.+.-+ -..+.+++.++.+.|.+.+....|+.|+=...++.. .....+. +|+|.|.=.+=|.
T Consensus 958 ~~~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~~AGAD~IvVsG~eGGTgasp~~~ 1037 (1479)
T 1ea0_A 958 HSTPGVMLISPPPHHDIYSIEDLAQLIYDLKQINPDAKVTVKLVSRSGIGTIAAGVAKANADIILISGNSGGTGASPQTS 1037 (1479)
T ss_dssp TCCTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTCEEEEEEECCTTHHHHHHHHHHTTCSEEEEECTTCCCSSEETTH
T ss_pred CCCCCCCccCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEEcCCCChHHHHHHHHHcCCcEEEEcCCCCCCCCCchhh
Confidence 345677766432 134556666666667666667788888743212211 1122223 6999994222111
Q ss_pred --cCChHHHHHHHHHHHHHHHHc----CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 316 --ATSVEVTFLAQKMIAARCNKQ----GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 316 --e~~~e~v~~~qk~ii~~c~~~----gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
..|.+-+ .+-.++.+.+.+. .+|+|.+..+- -- .|++.|+..|||++.+.
T Consensus 1038 ~~~~G~Pt~-~aL~ev~~al~~~glr~~VpVIAdGGIr------tG--------~DVakALaLGAdaV~iG 1093 (1479)
T 1ea0_A 1038 IKFAGLPWE-MGLSEVHQVLTLNRLRHRVRLRTDGGLK------TG--------RDIVIAAMLGAEEFGIG 1093 (1479)
T ss_dssp HHHSCCCHH-HHHHHHHHHHHTTTCTTTSEEEEESSCC------SH--------HHHHHHHHTTCSEEECC
T ss_pred hcCCchhHH-HHHHHHHHHHHHcCCCCCceEEEECCCC------CH--------HHHHHHHHcCCCeeeEc
Confidence 1122111 2223344444444 58999988853 25 89999999999999997
No 429
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=33.98 E-value=66 Score=28.16 Aligned_cols=45 Identities=11% Similarity=0.175 Sum_probs=32.8
Q ss_pred HHHHHHHHHHhcCCcEEEEEcC---------CchHHHHHHhcCCCCCEEEEeCch
Q psy6272 426 IVIACVNAALKCQAVAIIVITC---------SGYSAKLVSKYRPQCPILAVSSLG 471 (547)
Q Consensus 426 ia~aav~~a~~~~a~aIvv~T~---------sG~tA~~isk~RP~~pIiavt~~~ 471 (547)
.+...++.|.+.+++.||+-|. -|.++..+.+.-| |||+.|-+..
T Consensus 112 ~~~~I~~~a~~~~~DLIVmG~~g~~~~~~~~~Gsva~~vl~~a~-~pVlvv~~~~ 165 (175)
T 2gm3_A 112 PKDVICQEVKRVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAE-CPVMTIKRNA 165 (175)
T ss_dssp HHHHHHHHHHHHCCSEEEEEECCCC--------CHHHHHHHHCS-SCEEEEECCG
T ss_pred HHHHHHHHHHHhCCCEEEEeCCCCChhhhhhcCchHHHHHhCCC-CCEEEEcCCc
Confidence 4556677788889999998875 2556777777654 9999997653
No 430
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=33.96 E-value=1.7e+02 Score=29.26 Aligned_cols=85 Identities=12% Similarity=0.144 Sum_probs=52.7
Q ss_pred cCEEEEcCCcc--cccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEee
Q psy6272 303 SDGVVLNRIQL--AVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVL 379 (547)
Q Consensus 303 ~DgImIargDL--g~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmL 379 (547)
+|||++. |=- +..+..++-..+.+..++.++ -..||+..+. ..+-+|. -+.+ .|-..|+|++|+
T Consensus 58 v~Gl~v~-GtTGE~~~Ls~~Er~~v~~~~v~~~~-grvpViaGvg---~~st~ea--------i~la~~A~~~Gadavlv 124 (314)
T 3qze_A 58 TNAIVAV-GTTGESATLDVEEHIQVIRRVVDQVK-GRIPVIAGTG---ANSTREA--------VALTEAAKSGGADACLL 124 (314)
T ss_dssp CCEEEES-SGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCEEEECC---CSSHHHH--------HHHHHHHHHTTCSEEEE
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCC---CcCHHHH--------HHHHHHHHHcCCCEEEE
Confidence 6999985 322 233444555555555555553 2479998776 4444555 3333 455679999999
Q ss_pred CCcch-----HHHHHHHHHHHHHHhhh
Q psy6272 380 TQSEQ-----AHHRVDILKEILKKTES 401 (547)
Q Consensus 380 sk~Et-----a~eaV~~m~~I~~~aE~ 401 (547)
. .+. --+.++....|+..+.-
T Consensus 125 ~-~P~y~~~s~~~l~~~f~~va~a~~l 150 (314)
T 3qze_A 125 V-TPYYNKPTQEGMYQHFRHIAEAVAI 150 (314)
T ss_dssp E-CCCSSCCCHHHHHHHHHHHHHHSCS
T ss_pred c-CCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 6 442 23788888888877743
No 431
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=33.90 E-value=1.1e+02 Score=29.12 Aligned_cols=39 Identities=15% Similarity=0.188 Sum_probs=31.1
Q ss_pred HHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 327 KMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 327 k~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
+..++.|+++|++|.+.|- - +. .++..++..|+|+++-.
T Consensus 194 ~~~v~~~~~~G~~V~~WTv----n---~~--------~~~~~l~~~GVDgIiTD 232 (250)
T 3ks6_A 194 AGLMAQVQAAGLDFGCWAA----H---TP--------SQITKALDLGVKVFTTD 232 (250)
T ss_dssp HHHHHHHHHTTCEEEEECC----C---SH--------HHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHCCCEEEEEeC----C---CH--------HHHHHHHHcCCCEEEcC
Confidence 5688899999999999874 1 22 55667788899999988
No 432
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=33.78 E-value=70 Score=32.23 Aligned_cols=56 Identities=16% Similarity=0.032 Sum_probs=39.1
Q ss_pred CceEEEEecCHHHHhhHHHHHhh--cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 280 RVLILAKIETLLGMEYMDEIIME--SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 280 ~i~IiakIEt~~av~nldeIl~~--~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
++.|++ =|+....+.+.++++. +|+|++.++-+|- +..+. ++++.|+++|.++.+.
T Consensus 240 ~iPI~~-de~~~~~~~~~~~i~~~~~d~v~ik~~~~GG------i~~~~-~i~~~A~~~g~~~~~~ 297 (359)
T 1mdl_A 240 NVPVQM-GENWLGPEEMFKALSIGACRLAMPDAMKIGG------VTGWI-RASALAQQFGIPMSSH 297 (359)
T ss_dssp SSCEEE-CTTCCSHHHHHHHHHTTCCSEECCBTTTTTH------HHHHH-HHHHHHHHTTCCBCCB
T ss_pred CCCEEe-CCCCCCHHHHHHHHHcCCCCEEeecchhhCC------HHHHH-HHHHHHHHcCCeEeec
Confidence 455543 4665556667777665 6999998888872 33444 4888999999998764
No 433
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=33.69 E-value=3.2e+02 Score=29.10 Aligned_cols=143 Identities=10% Similarity=0.064 Sum_probs=87.8
Q ss_pred CChhhHHHHH--HHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHh--hcCEEEEcCCc
Q psy6272 237 IADRDKHVVD--LIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIM--ESDGVVLNRIQ 312 (547)
Q Consensus 237 lt~~D~~di~--~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~--~~DgImIargD 312 (547)
+|..+.-++- +.-+.++.+|-=|| ..+|....+.+-...+.++.|++-=-+....+.+...+. .+|+|.|-...
T Consensus 281 ~t~~Elid~y~~lle~ypIv~IEDPl--~~dD~eg~a~Lt~~lg~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~IlIKvnQ 358 (452)
T 3otr_A 281 LTGEKLKEVYEGWLKKYPIISVEDPF--DQDDFASFSAFTKDVGEKTQVIGDDILVTNILRIEKALKDKACNCLLLKVNQ 358 (452)
T ss_dssp ECHHHHHHHHHHHHHHSCEEEEECCS--CTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHH
T ss_pred ccHHHHHHHHHHHHhhhCceEEecCC--ChhhHHHHHHHHHhhCCCeEEEeCccccCCHHHHHHHHhcCCCCEEEeeccc
Confidence 5666655542 34456655555577 467777776666665667888764111222333444443 37999998776
Q ss_pred ccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHH
Q psy6272 313 LAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDIL 392 (547)
Q Consensus 313 Lg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m 392 (547)
.|- +-++.+ ++..|+++|.+++++...-| --|- -+.|+ +|..++.-+-.. +..-.|.+.-.
T Consensus 359 IGg------ITEalk-a~~lA~~~G~~vmvshrSGE------TeD~---~iAdL--aVgl~~gqIKtG-ap~rsER~aKy 419 (452)
T 3otr_A 359 IGS------VTEAIE-ACLLAQKSGWGVQVSHRSGE------TEDS---FIADL--VVGLRCGQIKSG-SPCRSERLCKY 419 (452)
T ss_dssp HCC------HHHHHH-HHHHHHHTTCEEEEECCSSC------CSCC---HHHHH--HHHTTCCEEECC-CSCSHHHHHHH
T ss_pred ccc------HHHHHH-HHHHHHHcCCeEEEeCCCCC------Cchh---HHHHH--HHHcCCCccccC-CCcchhHHHHH
Confidence 662 334443 88899999999999754433 1010 12566 455577777765 55556888888
Q ss_pred HHHHHHhh
Q psy6272 393 KEILKKTE 400 (547)
Q Consensus 393 ~~I~~~aE 400 (547)
+++++--|
T Consensus 420 NqLlrIee 427 (452)
T 3otr_A 420 NQLMRIEE 427 (452)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88776554
No 434
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=33.66 E-value=1.4e+02 Score=30.33 Aligned_cols=84 Identities=14% Similarity=0.173 Sum_probs=51.0
Q ss_pred cCEEEEcCCc--ccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEee
Q psy6272 303 SDGVVLNRIQ--LAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVL 379 (547)
Q Consensus 303 ~DgImIargD--Lg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmL 379 (547)
+|||++. |= =+..+..++-..+-+.+++.++ -..||+..+. ..+-+|. -+.+ .|-..|+|++|+
T Consensus 66 v~Gl~v~-GtTGE~~~Ls~eEr~~vi~~~ve~~~-grvpViaGvg---~~st~ea--------i~la~~A~~~Gadavlv 132 (343)
T 2v9d_A 66 VDGLFFL-GSGGEFSQLGAEERKAIARFAIDHVD-RRVPVLIGTG---GTNARET--------IELSQHAQQAGADGIVV 132 (343)
T ss_dssp CSCEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC---SSCHHHH--------HHHHHHHHHHTCSEEEE
T ss_pred CCEEEeC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC---CCCHHHH--------HHHHHHHHhcCCCEEEE
Confidence 6999886 32 2233444554444554555543 2579998776 5555565 4434 345569999999
Q ss_pred CCcch-----HHHHHHHHHHHHHHhh
Q psy6272 380 TQSEQ-----AHHRVDILKEILKKTE 400 (547)
Q Consensus 380 sk~Et-----a~eaV~~m~~I~~~aE 400 (547)
. .+. --+.++....|+..+.
T Consensus 133 ~-~P~Y~~~s~~~l~~~f~~VA~a~~ 157 (343)
T 2v9d_A 133 I-NPYYWKVSEANLIRYFEQVADSVT 157 (343)
T ss_dssp E-CCSSSCCCHHHHHHHHHHHHHTCS
T ss_pred C-CCCCCCCCHHHHHHHHHHHHHhcC
Confidence 6 443 2277778888876554
No 435
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=33.57 E-value=2e+02 Score=28.42 Aligned_cols=84 Identities=18% Similarity=0.149 Sum_probs=52.1
Q ss_pred cCEEEEcCCcc--cccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEee
Q psy6272 303 SDGVVLNRIQL--AVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVL 379 (547)
Q Consensus 303 ~DgImIargDL--g~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmL 379 (547)
+||+++. |=- +..+..++-..+-+..++.++ -..||+..+. ..+-+|. -+.+ .|-..|+|++|+
T Consensus 42 v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg---~~~t~~a--------i~la~~a~~~Gadavlv 108 (297)
T 3flu_A 42 TDGIVAV-GTTGESATLSVEEHTAVIEAVVKHVA-KRVPVIAGTG---ANNTVEA--------IALSQAAEKAGADYTLS 108 (297)
T ss_dssp CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC---CSSHHHH--------HHHHHHHHHTTCSEEEE
T ss_pred CCEEEeC-ccccCcccCCHHHHHHHHHHHHHHhC-CCCcEEEeCC---CcCHHHH--------HHHHHHHHHcCCCEEEE
Confidence 6999985 222 234444554444454555553 2479998776 4555555 3333 455679999999
Q ss_pred CCcchH-----HHHHHHHHHHHHHhh
Q psy6272 380 TQSEQA-----HHRVDILKEILKKTE 400 (547)
Q Consensus 380 sk~Eta-----~eaV~~m~~I~~~aE 400 (547)
. .+.- -+.++....|+..+.
T Consensus 109 ~-~P~y~~~~~~~l~~~f~~va~a~~ 133 (297)
T 3flu_A 109 V-VPYYNKPSQEGIYQHFKTIAEATS 133 (297)
T ss_dssp E-CCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred C-CCCCCCCCHHHHHHHHHHHHHhCC
Confidence 6 4432 277888888877764
No 436
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=33.54 E-value=1.6e+02 Score=29.08 Aligned_cols=84 Identities=14% Similarity=0.171 Sum_probs=50.2
Q ss_pred cCEEEEcCCcc--cccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEee
Q psy6272 303 SDGVVLNRIQL--AVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVL 379 (547)
Q Consensus 303 ~DgImIargDL--g~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmL 379 (547)
+|||++. |=- +..+..++-..+-+..++.++ -..||+..+. ..+-.|. -+.+ .|-..|+|++|+
T Consensus 47 v~gl~v~-GtTGE~~~Ls~eEr~~v~~~~~~~~~-grvpViaGvg---~~~t~~a--------i~la~~A~~~Gadavlv 113 (301)
T 1xky_A 47 TTAIVVG-GTTGESPTLTSEEKVALYRHVVSVVD-KRVPVIAGTG---SNNTHAS--------IDLTKKATEVGVDAVML 113 (301)
T ss_dssp CCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC---CSCHHHH--------HHHHHHHHHTTCSEEEE
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCceEEeCCC---CCCHHHH--------HHHHHHHHhcCCCEEEE
Confidence 6999886 322 223444554444454555543 2589998776 4444455 4434 345569999999
Q ss_pred CCcchH-----HHHHHHHHHHHHHhh
Q psy6272 380 TQSEQA-----HHRVDILKEILKKTE 400 (547)
Q Consensus 380 sk~Eta-----~eaV~~m~~I~~~aE 400 (547)
. .+.- -+.++....|+....
T Consensus 114 ~-~P~y~~~s~~~l~~~f~~va~a~~ 138 (301)
T 1xky_A 114 V-APYYNKPSQEGMYQHFKAIAESTP 138 (301)
T ss_dssp E-CCCSSCCCHHHHHHHHHHHHHTCS
T ss_pred c-CCCCCCCCHHHHHHHHHHHHHhcC
Confidence 6 4432 267777777766554
No 437
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=33.53 E-value=49 Score=31.15 Aligned_cols=101 Identities=8% Similarity=-0.067 Sum_probs=58.3
Q ss_pred HHHHHHHHHcCCcEEEEcccC-----ChhhHHHHHHHHHhcCCCceEEEE---e-----cCHHHHhhHHHHHhhc-----
Q psy6272 242 KHVVDLIVREAVDIIIMSSVT-----GANSIREMRGMLEDHVDRVLILAK---I-----ETLLGMEYMDEIIMES----- 303 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~-----sa~di~~~r~~l~~~~~~i~Iiak---I-----Et~~av~nldeIl~~~----- 303 (547)
.+.++.+.+.|+|+|-+.... +..+++++++.+.+.|-.+..+.- + +-.++++.+.+.+..+
T Consensus 19 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~A~~lG~ 98 (281)
T 3u0h_A 19 VLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLANLGLPLNLYDSEPVFLRELSLLPDRARLCARLGA 98 (281)
T ss_dssp HHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEECCEECCSCTTSCHHHHHHHHHTHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceEEecccccccCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 456889999999999887653 356788999999877644332220 1 1123455555555553
Q ss_pred CEEEE--cCC-cccccCChHHHHHHHHHHHHHHHHcCCcEEE
Q psy6272 304 DGVVL--NRI-QLAVATSVEVTFLAQKMIAARCNKQGKPFLV 342 (547)
Q Consensus 304 DgImI--arg-DLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~ 342 (547)
+.|.+ .++ +...+-.++.+...-+++...|.++|..+.+
T Consensus 99 ~~v~~~~~p~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~l 140 (281)
T 3u0h_A 99 RSVTAFLWPSMDEEPVRYISQLARRIRQVAVELLPLGMRVGL 140 (281)
T ss_dssp CEEEEECCSEESSCHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred CEEEEeecCCCCCcchhhHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 44442 222 1100111234444555667777777877666
No 438
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=33.31 E-value=36 Score=35.70 Aligned_cols=42 Identities=29% Similarity=0.577 Sum_probs=32.7
Q ss_pred EecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHH
Q psy6272 59 ATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKL 103 (547)
Q Consensus 59 ~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~ 103 (547)
+.+|+.. .+.++.++++|++++=|+ +||.++.+.+ +++.+|+
T Consensus 139 ~~v~~~~--~e~~~~lveaGvdvIvldta~G~~~~~~e-~I~~ik~ 181 (400)
T 3ffs_A 139 AAIGVNE--IERAKLLVEAGVDVIVLDSAHGHSLNIIR-TLKEIKS 181 (400)
T ss_dssp EEECCC---CHHHHHHHHHTCSEEEECCSCCSBHHHHH-HHHHHHT
T ss_pred eecCCCH--HHHHHHHHHcCCCEEEEeCCCCCcccHHH-HHHHHHh
Confidence 3445543 789999999999999999 9998777666 7766665
No 439
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=33.28 E-value=1.8e+02 Score=28.75 Aligned_cols=84 Identities=14% Similarity=0.127 Sum_probs=50.8
Q ss_pred cCEEEEcCCcc--cccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEee
Q psy6272 303 SDGVVLNRIQL--AVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVL 379 (547)
Q Consensus 303 ~DgImIargDL--g~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmL 379 (547)
+|||++. |=- +..+..++-..+-+.+++.++ -..||+..+. ..+-.|. -+.+ .|-..|+|++|+
T Consensus 51 v~gl~v~-GttGE~~~Ls~~Er~~v~~~~~~~~~-grvpviaGvg---~~st~~a--------i~la~~A~~~Gadavlv 117 (304)
T 3cpr_A 51 LDSLVLA-GTTGESPTTTAAEKLELLKAVREEVG-DRAKLIAGVG---TNNTRTS--------VELAEAAASAGADGLLV 117 (304)
T ss_dssp CCEEEES-STTTTTTTSCHHHHHHHHHHHHHHHT-TTSEEEEECC---CSCHHHH--------HHHHHHHHHTTCSEEEE
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEecCC---CCCHHHH--------HHHHHHHHhcCCCEEEE
Confidence 6999886 322 223444444444444555442 2589998776 4444555 4444 345569999999
Q ss_pred CCcchH-----HHHHHHHHHHHHHhh
Q psy6272 380 TQSEQA-----HHRVDILKEILKKTE 400 (547)
Q Consensus 380 sk~Eta-----~eaV~~m~~I~~~aE 400 (547)
. .+.- -+.++....|+....
T Consensus 118 ~-~P~y~~~~~~~l~~~f~~ia~a~~ 142 (304)
T 3cpr_A 118 V-TPYYSKPSQEGLLAHFGAIAAATE 142 (304)
T ss_dssp E-CCCSSCCCHHHHHHHHHHHHHHCC
T ss_pred C-CCCCCCCCHHHHHHHHHHHHHhcC
Confidence 6 4432 277778888877664
No 440
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=33.14 E-value=2.6e+02 Score=34.31 Aligned_cols=118 Identities=10% Similarity=0.020 Sum_probs=68.9
Q ss_pred HHHcCCcEEEEcc---cCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhH-HHHHhh-cCEEEEcCCccc--------
Q psy6272 248 IVREAVDIIIMSS---VTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYM-DEIIME-SDGVVLNRIQLA-------- 314 (547)
Q Consensus 248 ~~~~g~d~I~~sf---V~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nl-deIl~~-~DgImIargDLg-------- 314 (547)
.+..|++.+.-+- ..+.+++.++.+.|.+.+....|+.|+=...++... ..+.++ +|+|.|.=.+=|
T Consensus 993 ~~~~Gv~lisP~~~~d~~s~edl~~~I~~Lk~~~~~~PV~VKlv~~~gi~~~A~~a~kAGAD~IvVsG~eGGTgasp~~~ 1072 (1520)
T 1ofd_A 993 RSKPGVTLISPPPHHDIYSIEDLAQLIYDLHQINPEAQVSVKLVAEIGIGTIAAGVAKANADIIQISGHDGGTGASPLSS 1072 (1520)
T ss_dssp TSCTTCCEECCSSCTTCSSHHHHHHHHHHHHHHCTTSEEEEEEECSTTHHHHHHHHHHTTCSEEEEECTTCCCSSEEHHH
T ss_pred CCCCCCCeeCCCCCcCcCCHHHHHHHHHHHHHhCCCCCEEEEecCCCChHHHHHHHHHcCCCEEEEeCCCCccCCCcchh
Confidence 4556777664432 355666666666676666677888886432222211 122333 799999432211
Q ss_pred -ccCChHHHHHHHHHHHHHHHHc----CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 315 -VATSVEVTFLAQKMIAARCNKQ----GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 315 -~e~~~e~v~~~qk~ii~~c~~~----gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
...|.+- ..+-.++.+.+.+. .+|+|.+..+- -- .|++.|+..|||++.+.
T Consensus 1073 ~~~~GlPt-~~aL~ev~~al~~~glr~~IpVIAdGGIr------tG--------~DVakALaLGAdaV~iG 1128 (1520)
T 1ofd_A 1073 IKHAGSPW-ELGVTEVHRVLMENQLRDRVLLRADGGLK------TG--------WDVVMAALMGAEEYGFG 1128 (1520)
T ss_dssp HHHBCCCH-HHHHHHHHHHHHHTTCGGGCEEEEESSCC------SH--------HHHHHHHHTTCSEEECS
T ss_pred hcCCchhH-HHHHHHHHHHHHhcCCCCCceEEEECCCC------CH--------HHHHHHHHcCCCeeEEc
Confidence 0111111 12223344444443 48999988853 25 89999999999999998
No 441
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=33.02 E-value=2.7e+02 Score=25.82 Aligned_cols=112 Identities=11% Similarity=0.120 Sum_probs=64.6
Q ss_pred CCCChh--hH-HHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEE-----------ecCHHHHhhHHHHH
Q psy6272 235 PVIADR--DK-HVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAK-----------IETLLGMEYMDEII 300 (547)
Q Consensus 235 p~lt~~--D~-~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~Iiak-----------IEt~~av~nldeIl 300 (547)
|..+.. +. +.++.+.+.|+++|.+ ++++.++.+|+.. ++.++.- |+. -.+.+++.+
T Consensus 29 p~~~~~~~~~~~~a~~~~~~G~~~i~~---~~~~~i~~i~~~~-----~~p~i~~~~~~~~~~~~~i~~--~~~~i~~~~ 98 (234)
T 1yxy_A 29 PLYSETGGIMPLMAKAAQEAGAVGIRA---NSVRDIKEIQAIT-----DLPIIGIIKKDYPPQEPFITA--TMTEVDQLA 98 (234)
T ss_dssp TTCCTTCCSHHHHHHHHHHHTCSEEEE---ESHHHHHHHHTTC-----CSCEEEECBCCCTTSCCCBSC--SHHHHHHHH
T ss_pred CCcCCccchHHHHHHHHHHCCCcEeec---CCHHHHHHHHHhC-----CCCEEeeEcCCCCccccccCC--hHHHHHHHH
Confidence 334444 44 4456677899999876 4788888887653 3444321 221 234566666
Q ss_pred hh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHc--CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEE
Q psy6272 301 ME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQ--GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVV 377 (547)
Q Consensus 301 ~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~--gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~v 377 (547)
.. +|.|.++-.-+.-.-+ +.+ .++++.+++. ++++++-.. | . .++-.+...|+|.+
T Consensus 99 ~~Gad~V~l~~~~~~~~~~-~~~----~~~i~~i~~~~~~~~v~~~~~-----t---~--------~ea~~a~~~Gad~i 157 (234)
T 1yxy_A 99 ALNIAVIAMDCTKRDRHDG-LDI----ASFIRQVKEKYPNQLLMADIS-----T---F--------DEGLVAHQAGIDFV 157 (234)
T ss_dssp TTTCSEEEEECCSSCCTTC-CCH----HHHHHHHHHHCTTCEEEEECS-----S---H--------HHHHHHHHTTCSEE
T ss_pred HcCCCEEEEcccccCCCCC-ccH----HHHHHHHHHhCCCCeEEEeCC-----C---H--------HHHHHHHHcCCCEE
Confidence 55 7998876332210000 011 3466677776 888776322 2 2 45567888999999
No 442
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=33.00 E-value=63 Score=32.55 Aligned_cols=72 Identities=15% Similarity=0.059 Sum_probs=53.6
Q ss_pred eCCCCcCCCCCChhhHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHH
Q psy6272 227 VPRVTFNLPVIADRDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEI 299 (547)
Q Consensus 227 lp~~~~~lp~lt~~D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeI 299 (547)
.|..+.+.+. .+.|...++.=++.|||+++--++-+++.+...++.+.+.|-++.|++-|==.....++.-+
T Consensus 152 yPE~Hp~a~~-~~~d~~~Lk~KvdAGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~ 223 (304)
T 3fst_A 152 YPEVHPEAKS-AQADLLNLKRKVDAGANRAITQFFFDVESYLRFRDRCVSAGIDVEIIPGILPVSNFKQAKKL 223 (304)
T ss_dssp CTTCCTTCSC-HHHHHHHHHHHHHHTCCEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCSCHHHHHHH
T ss_pred CCCcCCCCCC-HHHHHHHHHHHHHcCCCEEEeCccCCHHHHHHHHHHHHhcCCCCcEEEEecccCCHHHHHHH
Confidence 4554444433 24678889999999999999999999999999999998888788888865433444444433
No 443
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=32.78 E-value=96 Score=31.11 Aligned_cols=59 Identities=10% Similarity=0.050 Sum_probs=32.6
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHh----hcCEEEEc
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIM----ESDGVVLN 309 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~----~~DgImIa 309 (547)
....+...+.|||+|-.|.+.+..++. +.+.+.+....+++-+ .+++|... -+|.|-+.
T Consensus 90 ide~qil~aaGAD~Id~s~~~~~~~li---~~i~~~~~g~~vvv~v------~~~~Ea~~a~~~Gad~I~v~ 152 (297)
T 4adt_A 90 FVEAQILEELKVDMLDESEVLTMADEY---NHINKHKFKTPFVCGC------TNLGEALRRISEGASMIRTK 152 (297)
T ss_dssp HHHHHHHHHTTCSEEEEETTSCCSCSS---CCCCGGGCSSCEEEEE------SSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEcCCCCCHHHHH---HHHHhcCCCCeEEEEe------CCHHHHHHHHhCCCCEEEEC
Confidence 556666678999999666664443321 1222222345666644 34444332 26877775
No 444
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=32.77 E-value=1.3e+02 Score=29.73 Aligned_cols=88 Identities=9% Similarity=0.012 Sum_probs=51.5
Q ss_pred HHhh-cCEEEEcCCc--ccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHH-HHHhCc
Q psy6272 299 IIME-SDGVVLNRIQ--LAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNS-IVQDGA 374 (547)
Q Consensus 299 Il~~-~DgImIargD--Lg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~n-av~~g~ 374 (547)
.++. +|||++. |= =+..+..++-..+-+..++.++. ..||+..+. ..+-+|. -+.+. |-..|+
T Consensus 31 li~~Gv~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg---~~~t~~a--------i~la~~a~~~Ga 97 (292)
T 2ojp_A 31 HVASGTSAIVSV-GTTGESATLNHDEHADVVMMTLDLADG-RIPVIAGTG---ANATAEA--------ISLTQRFNDSGI 97 (292)
T ss_dssp HHHHTCCEEEES-STTTTGGGSCHHHHHHHHHHHHHHHTT-SSCEEEECC---CSSHHHH--------HHHHHHTTTSSC
T ss_pred HHHcCCCEEEEC-ccccchhhCCHHHHHHHHHHHHHHhCC-CCcEEEecC---CccHHHH--------HHHHHHHHhcCC
Confidence 3444 7999886 32 22334445544444545555432 589998776 4444555 44443 445699
Q ss_pred cEEeeCCcchH-----HHHHHHHHHHHHHhh
Q psy6272 375 DVVVLTQSEQA-----HHRVDILKEILKKTE 400 (547)
Q Consensus 375 D~vmLsk~Eta-----~eaV~~m~~I~~~aE 400 (547)
|++|+. .+.- -+.++....|+....
T Consensus 98 davlv~-~P~y~~~s~~~l~~~f~~ia~a~~ 127 (292)
T 2ojp_A 98 VGCLTV-TPYYNRPSQEGLYQHFKAIAEHTD 127 (292)
T ss_dssp SEEEEE-CCCSSCCCHHHHHHHHHHHHTTCS
T ss_pred CEEEEC-CCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999996 4432 266777777765543
No 445
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=32.71 E-value=2.2e+02 Score=27.57 Aligned_cols=102 Identities=13% Similarity=0.055 Sum_probs=68.1
Q ss_pred HHHHHHcCCcEEEEc-----ccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHH---Hhh-cCEEEEcCCcccc
Q psy6272 245 VDLIVREAVDIIIMS-----SVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEI---IME-SDGVVLNRIQLAV 315 (547)
Q Consensus 245 i~~~~~~g~d~I~~s-----fV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeI---l~~-~DgImIargDLg~ 315 (547)
.+...+.|++.|.+- |=.+.++++.+++.. ++.|+.| ..+.+-.+| ... +|+|.++-.+|.
T Consensus 71 A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v-----~lPvl~k----dfI~d~~qi~~a~~~GAD~VlL~~~~l~- 140 (254)
T 1vc4_A 71 ALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAV-----DLPLLRK----DFVVDPFMLEEARAFGASAALLIVALLG- 140 (254)
T ss_dssp HHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHHC-----CSCEEEE----SCCCSHHHHHHHHHTTCSEEEEEHHHHG-
T ss_pred HHHHHHcCCCEEEEecchhhhccCHHHHHHHHHhc-----CCCEEEC----CcCCCHHHHHHHHHcCCCEEEECccchH-
Confidence 456677899999882 335888999988843 5666654 344444333 333 799999866664
Q ss_pred cCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeC
Q psy6272 316 ATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLT 380 (547)
Q Consensus 316 e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLs 380 (547)
+ .-++++..|+..|.-+.+.++ +. .+...+...|+|.+-++
T Consensus 141 ----~----~l~~l~~~a~~lGl~~lvev~-----~~-----------~E~~~a~~~gad~IGvn 181 (254)
T 1vc4_A 141 ----E----LTGAYLEEARRLGLEALVEVH-----TE-----------RELEIALEAGAEVLGIN 181 (254)
T ss_dssp ----G----GHHHHHHHHHHHTCEEEEEEC-----SH-----------HHHHHHHHHTCSEEEEE
T ss_pred ----H----HHHHHHHHHHHCCCeEEEEEC-----CH-----------HHHHHHHHcCCCEEEEc
Confidence 1 234577788889988887543 22 33456788899998887
No 446
>3fg9_A Protein of universal stress protein USPA family; APC60691, nucleotide- binding, lactobacillus plantarum WCFS1, structural genomics PSI-2; 1.47A {Lactobacillus plantarum}
Probab=32.59 E-value=46 Score=28.51 Aligned_cols=42 Identities=5% Similarity=0.045 Sum_probs=31.7
Q ss_pred HHHHHHHHH-HHhcCCcEEEEEcCC--------chHHHHHHhcCCCCCEEEE
Q psy6272 425 SIVIACVNA-ALKCQAVAIIVITCS--------GYSAKLVSKYRPQCPILAV 467 (547)
Q Consensus 425 ~ia~aav~~-a~~~~a~aIvv~T~s--------G~tA~~isk~RP~~pIiav 467 (547)
..+...++. |.+.+++.||+-++. |.++..+.+.= +||++.|
T Consensus 105 ~~~~~I~~~~a~~~~~DlIV~G~~g~~~~~~~~Gs~~~~vl~~a-~~PVlvV 155 (156)
T 3fg9_A 105 DVDDVILEQVIPEFKPDLLVTGADTEFPHSKIAGAIGPRLARKA-PISVIVV 155 (156)
T ss_dssp CHHHHHHHTHHHHHCCSEEEEETTCCCTTSSSCSCHHHHHHHHC-SSEEEEE
T ss_pred CHHHHHHHHHHHhcCCCEEEECCCCCCccceeecchHHHHHHhC-CCCEEEe
Confidence 345566676 788899999998862 67888888764 5999876
No 447
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=32.55 E-value=3.8e+02 Score=26.53 Aligned_cols=150 Identities=11% Similarity=0.095 Sum_probs=84.3
Q ss_pred eCCCCcCCCCCChhhHHHHH-HHHH--cCCcEEEEcccCCh----hhHHHHHHHHHhc-CCCceEEE-EecCHHHHhhHH
Q psy6272 227 VPRVTFNLPVIADRDKHVVD-LIVR--EAVDIIIMSSVTGA----NSIREMRGMLEDH-VDRVLILA-KIETLLGMEYMD 297 (547)
Q Consensus 227 lp~~~~~lp~lt~~D~~di~-~~~~--~g~d~I~~sfV~sa----~di~~~r~~l~~~-~~~i~Iia-kIEt~~av~nld 297 (547)
||++.-- -|.+|--.+. .+.+ .|-++|=+--+... .|..+..+..+.. ...+.++. -..++.--+.+.
T Consensus 77 lpNTag~---~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~ 153 (265)
T 1wv2_A 77 LPNTAGC---YDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLA 153 (265)
T ss_dssp EEECTTC---CSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHH
T ss_pred CCcCCCC---CCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH
Confidence 4554432 2455544443 3444 37889888877222 2333333333222 23455553 555555444443
Q ss_pred HHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEE
Q psy6272 298 EIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVV 377 (547)
Q Consensus 298 eIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~v 377 (547)
+. -+|.||--....|...|+... ...+.|.+ ..+.|||+...+- .-+|++.+...|+|+|
T Consensus 154 ~~--G~~aVmPlg~pIGsG~Gi~~~-~lI~~I~e---~~~vPVI~eGGI~--------------TPsDAa~AmeLGAdgV 213 (265)
T 1wv2_A 154 EI--GCIAVMPLAGLIGSGLGICNP-YNLRIILE---EAKVPVLVDAGVG--------------TASDAAIAMELGCEAV 213 (265)
T ss_dssp HS--CCSEEEECSSSTTCCCCCSCH-HHHHHHHH---HCSSCBEEESCCC--------------SHHHHHHHHHHTCSEE
T ss_pred Hh--CCCEEEeCCccCCCCCCcCCH-HHHHHHHh---cCCCCEEEeCCCC--------------CHHHHHHHHHcCCCEE
Confidence 32 268888733444555555342 22244443 4689999976521 2288999999999999
Q ss_pred eeCCcchHH----HHHHHHHHHHHHhhhh
Q psy6272 378 VLTQSEQAH----HRVDILKEILKKTESV 402 (547)
Q Consensus 378 mLsk~Eta~----eaV~~m~~I~~~aE~~ 402 (547)
+++ |++ .-+++...+...+|+-
T Consensus 214 lVg---SAI~~a~dP~~ma~af~~Av~aG 239 (265)
T 1wv2_A 214 LMN---TAIAHAKDPVMMAEAMKHAIVAG 239 (265)
T ss_dssp EES---HHHHTSSSHHHHHHHHHHHHHHH
T ss_pred EEC---hHHhCCCCHHHHHHHHHHHHHHH
Confidence 998 444 3466666666666653
No 448
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=32.27 E-value=3.9e+02 Score=26.57 Aligned_cols=130 Identities=10% Similarity=0.135 Sum_probs=76.8
Q ss_pred HHHHHHHHHcCCcEEEEcc-----------------cCChhhHHHHHHHHHhc-CCCceEEEEecCH-------HHHhhH
Q psy6272 242 KHVVDLIVREAVDIIIMSS-----------------VTGANSIREMRGMLEDH-VDRVLILAKIETL-------LGMEYM 296 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sf-----------------V~sa~di~~~r~~l~~~-~~~i~IiakIEt~-------~av~nl 296 (547)
.+.++...+.|+.+|.+== +...+-+.+++...... +....|+++.|.. ++++..
T Consensus 97 ~~~v~~l~~aGaagv~iED~~~~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtda~~a~~g~~~ai~Ra 176 (295)
T 1s2w_A 97 RRLVRKLEDRGVAGACLEDKLFPKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVEAFIAGWGLDEALKRA 176 (295)
T ss_dssp HHHHHHHHHTTCCEEEEECBCC--------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEECTTTTTCCHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEECCCCCCccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeehHHhccccHHHHHHHH
Confidence 4445666788999887521 11114467777666543 4578999999985 455555
Q ss_pred HHHHhh-cCEEEEcCC--cccccCChHHHHHHHHHHHHHHHHcC--CcEEEEcCCCCCCCcccccccCccchhhHHHHHH
Q psy6272 297 DEIIME-SDGVVLNRI--QLAVATSVEVTFLAQKMIAARCNKQG--KPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQ 371 (547)
Q Consensus 297 deIl~~-~DgImIarg--DLg~e~~~e~v~~~qk~ii~~c~~~g--KPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~ 371 (547)
....++ +|+||+-.+ |. +. +-+.|++.. +|+++ .|+.--. .++...-.
T Consensus 177 ~ay~eAGAd~i~~e~~~~~~------~~-------~~~i~~~~~~~~P~i~------~~~~~~~--------~~~~eL~~ 229 (295)
T 1s2w_A 177 EAYRNAGADAILMHSKKADP------SD-------IEAFMKAWNNQGPVVI------VPTKYYK--------TPTDHFRD 229 (295)
T ss_dssp HHHHHTTCSEEEECCCSSSS------HH-------HHHHHHHHTTCSCEEE------CCSTTTT--------SCHHHHHH
T ss_pred HHHHHcCCCEEEEcCCCCCH------HH-------HHHHHHHcCCCCCEEE------eCCCCCC--------CCHHHHHH
Confidence 555555 799998521 21 11 223344555 89986 3431111 22333345
Q ss_pred hCccEEeeCCcchHHHHHHHHHHHHHHh
Q psy6272 372 DGADVVVLTQSEQAHHRVDILKEILKKT 399 (547)
Q Consensus 372 ~g~D~vmLsk~Eta~eaV~~m~~I~~~a 399 (547)
.|+..+... .-...-+...|.+..++.
T Consensus 230 lGv~~v~~~-~~~~raa~~a~~~~~~~i 256 (295)
T 1s2w_A 230 MGVSMVIWA-NHNLRASVSAIQQTTKQI 256 (295)
T ss_dssp HTCCEEEEC-SHHHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEC-hHHHHHHHHHHHHHHHHH
Confidence 599999997 554446666666665554
No 449
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=32.27 E-value=2.2e+02 Score=23.62 Aligned_cols=113 Identities=12% Similarity=0.206 Sum_probs=57.7
Q ss_pred CChhhHHHHHHHHHhcCCCceEEEEecC-HHHHhhHHHH-------HhhcCEEEEcCCcccccCChHHHHHHHHHHHHHH
Q psy6272 262 TGANSIREMRGMLEDHVDRVLILAKIET-LLGMEYMDEI-------IMESDGVVLNRIQLAVATSVEVTFLAQKMIAARC 333 (547)
Q Consensus 262 ~sa~di~~~r~~l~~~~~~i~IiakIEt-~~av~nldeI-------l~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c 333 (547)
.+......++..|.+.+....+.. ..+ .+|++.+.+- -...|.|++. -+|.-.-|++-+ +++-...
T Consensus 12 dd~~~~~~l~~~L~~~g~~~~v~~-~~~~~~al~~l~~~~~~~~~~~~~~dliilD-~~l~~~~g~~~~----~~lr~~~ 85 (152)
T 3heb_A 12 DDLGHARLIEKNIRRAGVNNEIIA-FTDGTSALNYLFGDDKSGRVSAGRAQLVLLD-LNLPDMTGIDIL----KLVKENP 85 (152)
T ss_dssp CCHHHHHHHHHHHHHTTCCCCEEE-ESSHHHHHHHHHCTTSSSGGGTTCBEEEEEC-SBCSSSBHHHHH----HHHHHST
T ss_pred CCHHHHHHHHHHHHhCCCcceEEE-eCCHHHHHHHHhccccccccccCCCCEEEEe-CCCCCCcHHHHH----HHHHhcc
Confidence 355566777888877765323332 222 2333322210 1225888876 222211122222 2221111
Q ss_pred HHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHH
Q psy6272 334 NKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEI 395 (547)
Q Consensus 334 ~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I 395 (547)
...+.|+++.|. .. +. .++..+...|++.++.. .-+..+-.+.++++
T Consensus 86 ~~~~~pii~~t~---~~---~~--------~~~~~~~~~g~~~~l~K-P~~~~~l~~~i~~~ 132 (152)
T 3heb_A 86 HTRRSPVVILTT---TD---DQ--------REIQRCYDLGANVYITK-PVNYENFANAIRQL 132 (152)
T ss_dssp TTTTSCEEEEES---CC---CH--------HHHHHHHHTTCSEEEEC-CSSHHHHHHHHHHH
T ss_pred cccCCCEEEEec---CC---CH--------HHHHHHHHCCCcEEEeC-CCCHHHHHHHHHHH
Confidence 235778998775 22 23 45567888999999876 55555555555554
No 450
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=32.26 E-value=65 Score=31.26 Aligned_cols=62 Identities=19% Similarity=0.195 Sum_probs=45.9
Q ss_pred EEEecCCEEEEee--ccccccCCCccEEEecCCCcccc---cCCCCEEEEeceeEEEEEEEeCCeEEE
Q psy6272 149 VEIAQGANIVLTA--NQLIETKGTVKRLFVDSMELPKR---VIPDDIVYIDRNIKLKVVEKENNDVHC 211 (547)
Q Consensus 149 i~L~~G~~v~lt~--~~~~~~~~~~~~i~v~~~~~~~~---v~~Gd~I~idD~I~l~V~~v~~~~v~~ 211 (547)
.-.+.|++.+++. +.+|+..+......++...|... +++|+.+.++.. ..+|.+++++.|+.
T Consensus 62 ~Gm~vGek~~v~Ippe~AYGe~~~~lv~~vp~~~f~~~~~~~~vG~~~~~~~~-~g~V~~v~~~~V~v 128 (231)
T 3prb_A 62 LEMDVGEEREVVLPPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDGI-PGKIVSINSGRVLV 128 (231)
T ss_dssp HTCCTTCEEEEEECGGGTTCCCCGGGEEEEETHHHHTTTCCCCTTCEEEETTE-EEEEEEEETTEEEE
T ss_pred cCCCCCCEEEEEeCcHHhcCCCChHHEEecCHHHCCcccCCCCCCcEEEecCC-CEEEEEEcCCEEEE
Confidence 3467888888765 56777777777888877666542 678999999873 25799999987653
No 451
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=31.95 E-value=1.1e+02 Score=32.11 Aligned_cols=118 Identities=8% Similarity=-0.048 Sum_probs=70.8
Q ss_pred HHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHHHHhhhhhhhHH
Q psy6272 328 MIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQ 407 (547)
Q Consensus 328 ~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~~~aE~~~~~~~ 407 (547)
.+...|++.|.++.+. .|..+.. ..+...-..|++.+... + +-.++++...+++.+-...++.
T Consensus 174 avA~~aa~~G~~~~Iv-----mp~~~~~--------~k~~~~r~~GA~Vv~v~-~-~~~~a~~~a~~~a~~~~~~~~i-- 236 (442)
T 3ss7_X 174 SIGIMSARIGFKVTVH-----MSADARA--------WKKAKLRSHGVTVVEYE-Q-DYGVAVEEGRKAAQSDPNCFFI-- 236 (442)
T ss_dssp HHHHHHHHHTCEEEEE-----EETTSCH--------HHHHHHHHTTCEEEEES-S-CHHHHHHHHHHHHHTCTTEEEC--
T ss_pred HHHHHHHHhCCcEEEE-----ECCCCCH--------HHHHHHHHCCCEEEEEC-C-CHHHHHHHHHHHHHhCCCceeC--
Confidence 3667799999998875 4444333 45566667899988887 4 4457776665553332111110
Q ss_pred HHHHhhhcCCCCCC--hhhHHHHHHHHHHHhcC-----Cc-----EEEEEcCCchHHHHHHh-----cCCCCCEEEEeCc
Q psy6272 408 VFEDLCALACPPLD--PAHSIVIACVNAALKCQ-----AV-----AIIVITCSGYSAKLVSK-----YRPQCPILAVSSL 470 (547)
Q Consensus 408 ~f~~~~~~~~~~~~--~~~~ia~aav~~a~~~~-----a~-----aIvv~T~sG~tA~~isk-----~RP~~pIiavt~~ 470 (547)
....+ ...--...+.|+..++. .+ +||+.+-+|.++--+++ +.|.+.|++|-+.
T Consensus 237 ---------~~~n~~~~~~G~~t~g~Ei~eQl~~~g~~vD~~~Pd~VvvpvG~GG~~aGi~~~lk~~~~~~v~vigVep~ 307 (442)
T 3ss7_X 237 ---------DDENSRTLFLGYSVAGQRLKAQFAQQGRIVDADNPLFVYLPCGVGGGPGGVAFGLKLAFGDHVHCFFAEPT 307 (442)
T ss_dssp ---------CTTTCHHHHHHHHHHHHHHHHHHHHHTCCCBTTBCEEEEEECSSSHHHHHHHHHHHHHHGGGEEEEEEEET
T ss_pred ---------CCCChHHHHHHHHHHHHHHHHHHHhhcCcccccCCCEEEEEeCCchHHHHHHHHHHHhcCCCCEEEEEEeC
Confidence 01111 12222334445544432 33 89999999988776554 3799999999765
Q ss_pred h
Q psy6272 471 G 471 (547)
Q Consensus 471 ~ 471 (547)
.
T Consensus 308 ~ 308 (442)
T 3ss7_X 308 H 308 (442)
T ss_dssp T
T ss_pred C
Confidence 3
No 452
>3ddy_A Lumazine protein, LUMP; luminescent bacteria, lumazine PR riboflavin synthase, luminescence, luminescent protein; HET: RBF; 2.50A {Photobacterium leiognathi}
Probab=31.95 E-value=1e+02 Score=28.95 Aligned_cols=57 Identities=14% Similarity=0.057 Sum_probs=43.1
Q ss_pred ccEEEecCC-CcccccCCCCEEEEeceeEEEEEEEeCCeEEEEE------EeCcEeCCCceeeeC
Q psy6272 171 VKRLFVDSM-ELPKRVIPDDIVYIDRNIKLKVVEKENNDVHCTV------IRGGKLMDNQLVTVP 228 (547)
Q Consensus 171 ~~~i~v~~~-~~~~~v~~Gd~I~idD~I~l~V~~v~~~~v~~~V------~~gG~L~s~Kginlp 228 (547)
..++.+..+ .+.+.++.||.|-+|- +.|.|.+++++.+.+-+ ++=|.|+....|||-
T Consensus 21 ~~~l~i~~~~~~~~~~~~GdSIAvnG-vCLTV~~~~~~~f~vdv~ETl~~T~Lg~l~~G~~VNLE 84 (186)
T 3ddy_A 21 SQRHGIAFPEGMFQLVDVDTVMLVNG-CSNTVVRILGDMVYFDIDQALGTTTFDGLKEGDQVNLE 84 (186)
T ss_dssp CEEEEEECCTTTGGGCCTTCEEEETT-EEEEEEEEETTEEEEEECTTTTTSSGGGCCTTCEEEEE
T ss_pred cEEEEEEeChHHhccCCCCCeEEEee-EEEEEEEEcCCEEEEEhHHhhhhCchhhcCCCCEEEEC
Confidence 345666554 5789999999999998 78899999999988887 123555666677774
No 453
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=31.91 E-value=1.8e+02 Score=29.63 Aligned_cols=139 Identities=15% Similarity=0.202 Sum_probs=80.2
Q ss_pred hhhHHHHHHHHHcCCcE--EEEcccCChhhHHHHHHHHHhcCCCceEEEE-ecCHHHHhhHHHHHhhc----CEEEEcCC
Q psy6272 239 DRDKHVVDLIVREAVDI--IIMSSVTGANSIREMRGMLEDHVDRVLILAK-IETLLGMEYMDEIIMES----DGVVLNRI 311 (547)
Q Consensus 239 ~~D~~di~~~~~~g~d~--I~~sfV~sa~di~~~r~~l~~~~~~i~Iiak-IEt~~av~nldeIl~~~----DgImIarg 311 (547)
..+.+.++.|++.|++. ++-| ++- +....+-....+.+ ..++++ ..+.+-++.+-+.+... +-|++.||
T Consensus 141 T~~~eV~eaAleagag~~~lINs-v~~-~~~~~m~~laa~~g--~~vVlmh~~d~~~~~~l~~~a~~~GI~~e~IIlDPg 216 (323)
T 4djd_D 141 EKDHEVLEAVAEAAAGENLLLGN-AEQ-ENYKSLTAACMVHK--HNIIARSPLDINICKQLNILINEMNLPLDHIVIDPS 216 (323)
T ss_dssp HHHHHHHHHHHHHTTTSCCEEEE-EBT-TBCHHHHHHHHHHT--CEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEECC
T ss_pred CCCHHHHHHHHHhcCCCCCeEEE-CCc-ccHHHHHHHHHHhC--CeEEEEccchHHHHHHHHHHHHHcCCCHHHEEEeCC
Confidence 57889999999999772 4434 322 22344444444443 344443 32334444444444443 56889998
Q ss_pred cccccCChHHHHHHHHHHHHHH----HHcCCcEEEEcC---CCC----CC-----------Ccc---cccccCccchhhH
Q psy6272 312 QLAVATSVEVTFLAQKMIAARC----NKQGKPFLVVGD---ILP----DH-----------NVE---EYSDVSIGDMNDV 366 (547)
Q Consensus 312 DLg~e~~~e~v~~~qk~ii~~c----~~~gKPvi~aTq---~Le----~P-----------tra---E~~~~~~~~~~Dv 366 (547)
=....-+.+.-....+++=..+ +..|-|+++..- ++- .+ .|+ |+ .-.
T Consensus 217 ~g~fgk~~e~~l~~l~~ir~~al~~~~~lg~PvL~GvSrksf~~ke~~~~~~~~~~~g~~~~~~~~~E~--------~~a 288 (323)
T 4djd_D 217 IGGLGYGIEYSFSIMERIRLGALQGDKMLSMPVICTVGYEAWRAKEASAPVSEYPGWGKETERGILWEA--------VTA 288 (323)
T ss_dssp CCCTTTTHHHHHHHHHHHHHHHHHTCGGGCSCBEEEHHHHHHTSHHHHCCTTTCGGGCCHHHHHHHHHH--------HHH
T ss_pred CccccCCHHHHHHHHHHHHHHhhcccccCCCCEEEecchhhhhhccccccccccccccccchhhHHHHH--------HHH
Confidence 8666667776666666554432 368999998631 000 01 011 22 333
Q ss_pred HHHHHhCccEEeeCCcchHHHHHH
Q psy6272 367 NSIVQDGADVVVLTQSEQAHHRVD 390 (547)
Q Consensus 367 ~nav~~g~D~vmLsk~Eta~eaV~ 390 (547)
+..+..|+|.++|. ++.+++.++
T Consensus 289 ~~~~~~~~~i~v~~-~p~~~~~~~ 311 (323)
T 4djd_D 289 TALLQAGAHILLMR-HPEAVARVK 311 (323)
T ss_dssp HHHHTTTCSEEEEC-CHHHHHHHH
T ss_pred HHHHHhcCCEEEEc-CHHHHHHHH
Confidence 57788999999999 886654443
No 454
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=31.85 E-value=54 Score=33.00 Aligned_cols=62 Identities=11% Similarity=0.033 Sum_probs=50.9
Q ss_pred hhhHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHH
Q psy6272 239 DRDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEII 300 (547)
Q Consensus 239 ~~D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl 300 (547)
+.|.+.++.=++.|+|+++--++-+++.+...++.+.+.|-++.|++-|==.....++.-+.
T Consensus 160 ~~d~~~Lk~Kv~aGAdf~iTQ~ffD~~~~~~f~~~~r~~Gi~vPIi~GImPi~s~~~~~~~~ 221 (310)
T 3apt_A 160 EADLRHFKAKVEAGLDFAITQLFFNNAHYFGFLERARRAGIGIPILPGIMPVTSYRQLRRFT 221 (310)
T ss_dssp HHHHHHHHHHHHHHCSEEEECCCSCHHHHHHHHHHHHHTTCCSCEECEECCCCCTTHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEecccCCHHHHHHHHHHHHHcCCCCeEEEEecccCCHHHHHHHH
Confidence 36888899999999999999999999999999999988887888988765444555555444
No 455
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=31.74 E-value=2.4e+02 Score=26.13 Aligned_cols=68 Identities=13% Similarity=0.150 Sum_probs=36.9
Q ss_pred HHHHHHHHhcCCCceEEEEecCHH-HHhhHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcC
Q psy6272 268 REMRGMLEDHVDRVLILAKIETLL-GMEYMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGD 345 (547)
Q Consensus 268 ~~~r~~l~~~~~~i~IiakIEt~~-av~nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq 345 (547)
+.+.+.+.+.|-++.+..-=.+.+ -.+.++.++.. .|||++.+.|-. .....+..+.++|+|+++...
T Consensus 25 ~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~vdgiIi~~~~~~----------~~~~~~~~~~~~~iPvV~~~~ 94 (291)
T 3l49_A 25 QAQIAEIERLGGTAIALDAGRNDQTQVSQIQTLIAQKPDAIIEQLGNLD----------VLNPWLQKINDAGIPLFTVDT 94 (291)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHHHHHCCSEEEEESSCHH----------HHHHHHHHHHHTTCCEEEESC
T ss_pred HHHHHHHHHcCCEEEEEcCCCCHHHHHHHHHHHHHcCCCEEEEeCCChh----------hhHHHHHHHHHCCCcEEEecC
Confidence 344445555554444332111111 13344444444 799999876522 223356778889999988643
No 456
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=31.59 E-value=40 Score=28.22 Aligned_cols=41 Identities=7% Similarity=-0.208 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhcCCcEEEEEcCCchHHHHHHhcCCCCCEEEE
Q psy6272 426 IVIACVNAALKCQAVAIIVITCSGYSAKLVSKYRPQCPILAV 467 (547)
Q Consensus 426 ia~aav~~a~~~~a~aIvv~T~sG~tA~~isk~RP~~pIiav 467 (547)
.+...++.|.+.+++.||+-++.-.++..+.+.=| |||+.+
T Consensus 97 ~~~~I~~~a~~~~~dliV~G~~g~sv~~~vl~~a~-~PVlvv 137 (138)
T 1q77_A 97 LSEEVKKFVEGKGYELVVWACYPSAYLCKVIDGLN-LASLIV 137 (138)
T ss_dssp HHHHHHHHHTTSCCSEEEECSCCGGGTHHHHHHSS-SEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCchHHHHHHhCC-CceEee
Confidence 55666788888999988887753356666666654 999865
No 457
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=31.58 E-value=2e+02 Score=23.02 Aligned_cols=61 Identities=13% Similarity=0.023 Sum_probs=36.1
Q ss_pred HHHHHHhcCCcEEEEEc----CCchH-HHHHHhc--CCCCCEEEEeCchhccccccccccceEEeecC
Q psy6272 430 CVNAALKCQAVAIIVIT----CSGYS-AKLVSKY--RPQCPILAVSSLGYVCRHLNVYRNIRPLHYIR 490 (547)
Q Consensus 430 av~~a~~~~a~aIvv~T----~sG~t-A~~isk~--RP~~pIiavt~~~~~ar~l~l~~GV~p~~~~~ 490 (547)
|.+...+...++|++-. .+|.. .+.+.+. .|.+||+.+|........-.+..|+.-++.++
T Consensus 39 a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l~KP 106 (133)
T 3nhm_A 39 GLQQALAHPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYLVKP 106 (133)
T ss_dssp HHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEEESS
T ss_pred HHHHHhcCCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEEecc
Confidence 34444556778766632 24433 3344443 46899999999765555566778888888765
No 458
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=31.56 E-value=1e+02 Score=29.14 Aligned_cols=42 Identities=14% Similarity=0.249 Sum_probs=27.6
Q ss_pred hhHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcC
Q psy6272 294 EYMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGD 345 (547)
Q Consensus 294 ~nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq 345 (547)
+.++.++.. .|||++.+.|... ....++.++++|+||++...
T Consensus 52 ~~i~~l~~~~vdgiii~~~~~~~----------~~~~~~~~~~~giPvV~~~~ 94 (297)
T 3rot_A 52 QFIESALATYPSGIATTIPSDTA----------FSKSLQRANKLNIPVIAVDT 94 (297)
T ss_dssp HHHHHHHHTCCSEEEECCCCSST----------THHHHHHHHHHTCCEEEESC
T ss_pred HHHHHHHHcCCCEEEEeCCCHHH----------HHHHHHHHHHCCCCEEEEcC
Confidence 344444444 7999998766442 12245677889999998654
No 459
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=31.55 E-value=1.2e+02 Score=30.04 Aligned_cols=119 Identities=16% Similarity=0.066 Sum_probs=60.2
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCccccc-----
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVA----- 316 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg~e----- 316 (547)
...++.+.+.|+|+|..+-.-+.+++.++ +......+.+++-+.+.+-.. ..+-.-+|.|.+. |+.|..
T Consensus 90 ~~~~~~~~a~GAd~V~~~~~l~~~~~~~~---i~~~~~g~~v~~~~~~~~e~~--~a~~~Gad~V~~~-G~~g~g~~~~~ 163 (305)
T 2nv1_A 90 IVEARVLEAMGVDYIDESEVLTPADEEFH---LNKNEYTVPFVCGCRDLGEAT--RRIAEGASMLRTK-GEPGTGNIVEA 163 (305)
T ss_dssp HHHHHHHHHHTCSEEEECTTSCCSCSSCC---CCGGGCSSCEEEEESSHHHHH--HHHHTTCSEEEEC-CCTTSCCTHHH
T ss_pred hHHHHHHHHCCCCEEEEeccCCHHHHHHH---HHHhccCCcEEEEeCCHHHHH--HHHHCCCCEEEec-cccCccchHHH
Confidence 35567777899999974433344443222 221112355666665543211 1121226888774 443311
Q ss_pred ----------------CChHHHHH------HHHHHHHHH-HHcCCcEE--EEcCCCCCCCcccccccCccchhhHHHHHH
Q psy6272 317 ----------------TSVEVTFL------AQKMIAARC-NKQGKPFL--VVGDILPDHNVEEYSDVSIGDMNDVNSIVQ 371 (547)
Q Consensus 317 ----------------~~~e~v~~------~qk~ii~~c-~~~gKPvi--~aTq~Le~PtraE~~~~~~~~~~Dv~nav~ 371 (547)
+..+.+.. .--..+..+ ....+||+ ....+- .. .|+..+..
T Consensus 164 ~~h~rt~~~~i~~l~gi~~~~~~~~~~~~~~~~~~i~~i~~~~~iPvi~~a~GGI~------~~--------~d~~~~~~ 229 (305)
T 2nv1_A 164 VRHMRKVNAQVRKVVAMSEDELMTEAKNLGAPYELLLQIKKDGKLPVVNFAAGGVA------TP--------ADAALMMQ 229 (305)
T ss_dssp HHHHHHHHHHHHHHHHSCGGGHHHHHHHHTCCHHHHHHHHHHTSCSSCEEBCSCCC------SH--------HHHHHHHH
T ss_pred HhhhhhhhccchhhccccchhhhcccccccccHHHHHHHHHhcCCCEEEEeccCCC------CH--------HHHHHHHH
Confidence 01111110 001223333 33578987 444321 12 77788888
Q ss_pred hCccEEeeC
Q psy6272 372 DGADVVVLT 380 (547)
Q Consensus 372 ~g~D~vmLs 380 (547)
.|+|++++.
T Consensus 230 ~GadgV~vG 238 (305)
T 2nv1_A 230 LGADGVFVG 238 (305)
T ss_dssp TTCSCEEEC
T ss_pred cCCCEEEEc
Confidence 899999997
No 460
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=31.42 E-value=1.4e+02 Score=30.36 Aligned_cols=95 Identities=15% Similarity=0.111 Sum_probs=63.7
Q ss_pred ChhhH-HHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh--cCEEEEcCCccc
Q psy6272 238 ADRDK-HVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME--SDGVVLNRIQLA 314 (547)
Q Consensus 238 t~~D~-~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~--~DgImIargDLg 314 (547)
+..+. +.++..-+.|+++|=-|+ .++++..++.+-+.. .+.|++ =|+....+.+.++++. +|+|++.++-+|
T Consensus 202 ~~~~a~~~~~~l~~~~i~~iEqP~--~~~~~~~~~~l~~~~--~iPI~~-de~i~~~~~~~~~i~~~~~d~v~ik~~~~G 276 (384)
T 2pgw_A 202 SVHDAINMCRKLEKYDIEFIEQPT--VSWSIPAMAHVREKV--GIPIVA-DQAAFTLYDVYEICRQRAADMICIGPREIG 276 (384)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCS--CTTCHHHHHHHHHHC--SSCEEE-STTCCSHHHHHHHHHTTCCSEEEECHHHHT
T ss_pred CHHHHHHHHHHHHhcCCCEEeCCC--ChhhHHHHHHHHhhC--CCCEEE-eCCcCCHHHHHHHHHcCCCCEEEEcchhhC
Confidence 43443 334555568999998887 345665555543322 466554 5666667778888865 799999988776
Q ss_pred ccCChHHHHHHHHHHHHHHHHcCCcEEEEc
Q psy6272 315 VATSVEVTFLAQKMIAARCNKQGKPFLVVG 344 (547)
Q Consensus 315 ~e~~~e~v~~~qk~ii~~c~~~gKPvi~aT 344 (547)
- +..+ .+++..|+++|.++.+.+
T Consensus 277 G------it~~-~~i~~~A~~~g~~~~~~~ 299 (384)
T 2pgw_A 277 G------IQPM-MKAAAVAEAAGLKICIHS 299 (384)
T ss_dssp S------HHHH-HHHHHHHHHTTCCEEECC
T ss_pred C------HHHH-HHHHHHHHHCCCeEeecc
Confidence 3 2333 348899999999999864
No 461
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=31.40 E-value=1.6e+02 Score=29.77 Aligned_cols=94 Identities=6% Similarity=-0.072 Sum_probs=62.5
Q ss_pred ChhhH-HHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh--cCEEEEcCCccc
Q psy6272 238 ADRDK-HVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME--SDGVVLNRIQLA 314 (547)
Q Consensus 238 t~~D~-~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~--~DgImIargDLg 314 (547)
+..+. +.++..-+.|+++|=-|+ .++|+..++.+-+.. .+.|++ =|+....+.+.++++. +|+|++.++-.|
T Consensus 203 ~~~~a~~~~~~l~~~~i~~iEqP~--~~~d~~~~~~l~~~~--~iPI~~-dE~~~~~~~~~~~i~~~~~d~v~ik~~~~G 277 (371)
T 2ovl_A 203 TVDGAIRAARALAPFDLHWIEEPT--IPDDLVGNARIVRES--GHTIAG-GENLHTLYDFHNAVRAGSLTLPEPDVSNIG 277 (371)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCS--CTTCHHHHHHHHHHH--CSCEEE-CTTCCSHHHHHHHHHHTCCSEECCCTTTTT
T ss_pred CHHHHHHHHHHHHhcCCCEEECCC--CcccHHHHHHHHhhC--CCCEEe-CCCCCCHHHHHHHHHcCCCCEEeeCccccC
Confidence 33443 344455568999998887 334554444433222 466554 4776667777888766 799999988887
Q ss_pred ccCChHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 315 VATSVEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 315 ~e~~~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
- +..+. +++..|+++|.++.+.
T Consensus 278 G------i~~~~-~i~~~A~~~gi~~~~h 299 (371)
T 2ovl_A 278 G------YTTFR-KVAALAEANNMLLTSH 299 (371)
T ss_dssp S------HHHHH-HHHHHHHHTTCCEEEC
T ss_pred C------HHHHH-HHHHHHHHcCCeEccc
Confidence 3 33344 4889999999999985
No 462
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=31.25 E-value=57 Score=34.56 Aligned_cols=47 Identities=21% Similarity=0.443 Sum_probs=37.4
Q ss_pred EEEecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHHH
Q psy6272 57 IMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKLA 104 (547)
Q Consensus 57 Ii~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~a 104 (547)
+.+-+|+.....+.++.|+++|++++=++ +||......+ .++.+|+.
T Consensus 228 vga~ig~~~~~~~~a~~l~~aGvd~v~i~~~~G~~~~~~e-~i~~i~~~ 275 (494)
T 1vrd_A 228 VGAAVGTSPETMERVEKLVKAGVDVIVIDTAHGHSRRVIE-TLEMIKAD 275 (494)
T ss_dssp CEEEECSSTTHHHHHHHHHHTTCSEEEECCSCCSSHHHHH-HHHHHHHH
T ss_pred cccccCcCHhHHHHHHHHHHhCCCEEEEEecCCchHHHHH-HHHHHHHH
Confidence 34456765666889999999999999999 9998776777 77777764
No 463
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=31.13 E-value=3.1e+02 Score=27.32 Aligned_cols=119 Identities=11% Similarity=0.121 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhhcCEEEEcCCcccccCChHH
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIMESDGVVLNRIQLAVATSVEV 321 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~~DgImIargDLg~e~~~e~ 321 (547)
++.++.|.+.|. .|..-.|.+.+.++.+.+..++. +..+|.++ ++|.+..- |
T Consensus 7 ~~ll~~A~~~~y-Av~AfNv~n~e~~~avl~AAe~~--~sPvIlq~---------------------s~~~~~y~-g--- 58 (286)
T 1gvf_A 7 KYLLQDAQANGY-AVPAFNIHNAETIQAILEVCSEM--RSPVILAG---------------------TPGTFKHI-A--- 58 (286)
T ss_dssp HHHHHHHHHHTC-CEEEEECCSHHHHHHHHHHHHHH--TCCCEEEE---------------------CTTHHHHS-C---
T ss_pred HHHHHHHHHCCC-EEEEEeeCCHHHHHHHHHHHHHh--CCCEEEEC---------------------ChhHHhhc-C---
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHH--HHHHHHHHHHHHh
Q psy6272 322 TFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAH--HRVDILKEILKKT 399 (547)
Q Consensus 322 v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~--eaV~~m~~I~~~a 399 (547)
+..+-..+...+++++.||.+.+. -..++ .++..++..|++.+|+. +-..- |-|+.-.++++.+
T Consensus 59 ~~~~~~~v~~~a~~~~VPValHlD--------Hg~~~-----e~i~~ai~~GFtSVMiD-gS~lp~eeNi~~Tk~vv~~a 124 (286)
T 1gvf_A 59 LEEIYALCSAYSTTYNMPLALHLD--------HHESL-----DDIRRKVHAGVRSAMID-GSHFPFAENVKLVKSVVDFC 124 (286)
T ss_dssp HHHHHHHHHHHHHHTTSCBEEEEE--------EECCH-----HHHHHHHHTTCCEEEEC-CTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcEEEEcC--------CCCCH-----HHHHHHHHcCCCeEEEC-CCCCCHHHHHHHHHHHHHHH
Q ss_pred hhh
Q psy6272 400 ESV 402 (547)
Q Consensus 400 E~~ 402 (547)
-+.
T Consensus 125 h~~ 127 (286)
T 1gvf_A 125 HSQ 127 (286)
T ss_dssp HHT
T ss_pred HHc
No 464
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=31.13 E-value=39 Score=33.05 Aligned_cols=99 Identities=7% Similarity=0.034 Sum_probs=50.6
Q ss_pred HHHHHHHHcCCcEEEEcccCC-----h----hhHHHHHH----HHHhcCCCceEEEEe-----cCHHHHhhHHHHHhhcC
Q psy6272 243 HVVDLIVREAVDIIIMSSVTG-----A----NSIREMRG----MLEDHVDRVLILAKI-----ETLLGMEYMDEIIMESD 304 (547)
Q Consensus 243 ~di~~~~~~g~d~I~~sfV~s-----a----~di~~~r~----~l~~~~~~i~IiakI-----Et~~av~nldeIl~~~D 304 (547)
++++.+.+.|++.++++-+.- + ++...+.+ ...+.+.+ +++-+ +..+..+...+.+..
T Consensus 15 ~~l~~a~~~GV~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~~--v~~~~GiHP~~~~~~~~~~~~~l~~-- 90 (261)
T 3guw_A 15 SELVKLKENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCEAAGVK--MHPAVGIHPRCIPPDYEFVLGYLEE-- 90 (261)
T ss_dssp HHHHHHHTTSCCEECCBCCCSSCCSSHHHHHHHHHHHHHTHHHHHHTTTCE--ECCBCCCCGGGCCTTTHHHHHHHTT--
T ss_pred HHHHHHHHCCCcEEEEeccCccccchhhhHHHHHHHHHHHHHHHHHHCCCC--EEEEEEECcccccccHHHHHHHhCc--
Confidence 468899999999988876442 1 22233332 12222211 22111 101112222222322
Q ss_pred EEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcC
Q psy6272 305 GVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGD 345 (547)
Q Consensus 305 gImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq 345 (547)
.=++|=|..|.+...+.=..+-++.++.|++.|+||++.|.
T Consensus 91 ~~vvaIGEiGLD~~~~~Q~~~f~~ql~lA~e~~lPv~iH~r 131 (261)
T 3guw_A 91 GEWVAFGEIGLELVTDEEIEVLKSQLELAKRMDVPCIIHTP 131 (261)
T ss_dssp SCCSCEEEEECSSCCHHHHHHHHHHHHHHHHHTCCEEEECC
T ss_pred CCeEEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEEEcC
Confidence 23445567777665432122334567789999999999764
No 465
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=30.78 E-value=1.2e+02 Score=29.53 Aligned_cols=94 Identities=15% Similarity=0.221 Sum_probs=56.8
Q ss_pred HHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEe--------cCHHHHhhHHHHHhhcCEEEEcCCccc
Q psy6272 243 HVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKI--------ETLLGMEYMDEIIMESDGVVLNRIQLA 314 (547)
Q Consensus 243 ~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakI--------Et~~av~nldeIl~~~DgImIargDLg 314 (547)
+.++.+.+.|++.+++ -.+.++.+.+.++..+. . .+++-+ +..+-++.|.+.+... +|=|..|
T Consensus 18 ~vl~~a~~~gV~~i~v--~~~~~~~~~~~~la~~~-~--~v~~~~GiHP~~~~~~~~~l~~l~~~~~~~----vaIGEiG 88 (254)
T 3gg7_A 18 AVARACEERQLTVLSV--TTTPAAWRGTLALAAGR-P--HVWTALGFHPEVVSERAADLPWFDRYLPET----RFVGEVG 88 (254)
T ss_dssp HHHHHHHHTTCEEEEC--CSSGGGHHHHHGGGTTC-T--TEEECBCCCGGGTTTTGGGTHHHHHHGGGC----SEEEEEE
T ss_pred HHHHHHHHCCCcEEEe--cCCHHHHHHHHHHHHhC-C--CeEEEEeeCcccccccHHHHHHHHHHhhhc----cEEEEEe
Confidence 4578899999998775 35778887777665432 2 233321 2223344455544332 4446777
Q ss_pred ccCChH--HHHHHH----HHHHHHHHHcCCcEE-EEcC
Q psy6272 315 VATSVE--VTFLAQ----KMIAARCNKQGKPFL-VVGD 345 (547)
Q Consensus 315 ~e~~~e--~v~~~q----k~ii~~c~~~gKPvi-~aTq 345 (547)
.+.... .-...| ++.++.|++.++||+ +.|.
T Consensus 89 LD~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~r 126 (254)
T 3gg7_A 89 LDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHSR 126 (254)
T ss_dssp CCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cCCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 776542 223344 356778999999999 9764
No 466
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=30.72 E-value=38 Score=35.08 Aligned_cols=47 Identities=17% Similarity=0.358 Sum_probs=36.4
Q ss_pred EEEecCCCCCCHHHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHHH
Q psy6272 57 IMATVGENNNSVDLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKLA 104 (547)
Q Consensus 57 Ii~TiGpas~~~e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~a 104 (547)
+.+.+|-.....+.++.++++|+++.=++ +||..+...+ +|+.+|++
T Consensus 91 ~~~~~g~~~~~~e~~~~a~~aGvdvI~id~a~G~~~~~~e-~I~~ir~~ 138 (361)
T 3r2g_A 91 VFVSVGCTENELQRAEALRDAGADFFCVDVAHAHAKYVGK-TLKSLRQL 138 (361)
T ss_dssp CBEEECSSHHHHHHHHHHHHTTCCEEEEECSCCSSHHHHH-HHHHHHHH
T ss_pred EEEEcCCCHHHHHHHHHHHHcCCCEEEEeCCCCCcHhHHH-HHHHHHHh
Confidence 34455644556789999999999999999 9998766666 77777764
No 467
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=30.69 E-value=1.4e+02 Score=26.25 Aligned_cols=62 Identities=18% Similarity=0.224 Sum_probs=36.0
Q ss_pred EEEecCCEEEEeeccccccCCCccEEEecCC-------CcccccCCCCEEEEece-----eEEEEEEE---eCCeEEEEE
Q psy6272 149 VEIAQGANIVLTANQLIETKGTVKRLFVDSM-------ELPKRVIPDDIVYIDRN-----IKLKVVEK---ENNDVHCTV 213 (547)
Q Consensus 149 i~L~~G~~v~lt~~~~~~~~~~~~~i~v~~~-------~~~~~v~~Gd~I~idD~-----I~l~V~~v---~~~~v~~~V 213 (547)
++.+.|..+++|.+- .|++... -+..+|++||.|++.|. ..-+|.++ ....++|=.
T Consensus 58 I~t~~g~~L~lTp~H---------~i~v~~~~~~~~~~v~A~~l~~GD~v~~~~~~~~~~~~~~V~~v~~~~~~G~yaPl 128 (145)
T 1at0_A 58 LHTDGGAVLTVTPAH---------LVSVWQPESQKLTFVFADRIEEKNQVLVRDVETGELRPQRVVKVGSVRSKGVVAPL 128 (145)
T ss_dssp EEETTSCEEEECTTC---------EEEEEETTTTEEEEEEGGGCCTTCEEEEECTTTCCEEEEEEEEEEEEEEEEEEEEE
T ss_pred EEECCCCEEEEeCCC---------EEEEecCCCCcEEEEEHHHCcCCCEEEEecCCCCCEEEEEEEEEEEEEEeeeEccc
Confidence 445566777777653 2333221 26789999999998762 23344444 334566655
Q ss_pred EeCcEe
Q psy6272 214 IRGGKL 219 (547)
Q Consensus 214 ~~gG~L 219 (547)
+..|.|
T Consensus 129 T~~Gti 134 (145)
T 1at0_A 129 TREGTI 134 (145)
T ss_dssp ESSSEE
T ss_pred cCcEEE
Confidence 544443
No 468
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=30.60 E-value=1.8e+02 Score=27.08 Aligned_cols=69 Identities=14% Similarity=0.155 Sum_probs=38.6
Q ss_pred HHHHHHHHHhc-CCCceEEEEe---cCHHH-HhhHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcE
Q psy6272 267 IREMRGMLEDH-VDRVLILAKI---ETLLG-MEYMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPF 340 (547)
Q Consensus 267 i~~~r~~l~~~-~~~i~IiakI---Et~~a-v~nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPv 340 (547)
+..+.+.+.+. |.++.+..-- ++.+. .+.++.++.. .|||++.+.+... ....++.+.++|+||
T Consensus 28 ~~gi~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiii~~~~~~~----------~~~~~~~~~~~~iPv 97 (304)
T 3gbv_A 28 QKGIREAVTTYSDFNISANITHYDPYDYNSFVATSQAVIEEQPDGVMFAPTVPQY----------TKGFTDALNELGIPY 97 (304)
T ss_dssp HHHHHHHHHHTGGGCEEEEEEEECSSCHHHHHHHHHHHHTTCCSEEEECCSSGGG----------THHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHhCCeEEEEEcCCCCCHHHHHHHHHHHHhcCCCEEEECCCChHH----------HHHHHHHHHHCCCeE
Confidence 33444555555 5555543321 22322 3445555444 7999999766431 123456677889999
Q ss_pred EEEcC
Q psy6272 341 LVVGD 345 (547)
Q Consensus 341 i~aTq 345 (547)
++...
T Consensus 98 V~~~~ 102 (304)
T 3gbv_A 98 IYIDS 102 (304)
T ss_dssp EEESS
T ss_pred EEEeC
Confidence 98654
No 469
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=30.55 E-value=1.5e+02 Score=29.47 Aligned_cols=84 Identities=11% Similarity=0.037 Sum_probs=49.6
Q ss_pred cCEEEEcCCcc--cccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEee
Q psy6272 303 SDGVVLNRIQL--AVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVL 379 (547)
Q Consensus 303 ~DgImIargDL--g~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmL 379 (547)
+|||++. |=- +..+..++-..+-+..++.++ -..||+..+. ..+-+|. -+.+ .|-..|+|++|+
T Consensus 47 v~gl~v~-GtTGE~~~Ls~eEr~~vi~~~~~~~~-grvpViaGvg---~~st~~a--------i~la~~A~~~Gadavlv 113 (306)
T 1o5k_A 47 VNALIVL-GTTGESPTVNEDEREKLVSRTLEIVD-GKIPVIVGAG---TNSTEKT--------LKLVKQAEKLGANGVLV 113 (306)
T ss_dssp CCEEEES-SGGGTGGGCCHHHHHHHHHHHHHHHT-TSSCEEEECC---CSCHHHH--------HHHHHHHHHHTCSEEEE
T ss_pred CCEEEeC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEcCC---CccHHHH--------HHHHHHHHhcCCCEEEE
Confidence 6999886 322 233444544444444555543 2579998776 4444555 4434 344569999999
Q ss_pred CCcchH-----HHHHHHHHHHHHHhh
Q psy6272 380 TQSEQA-----HHRVDILKEILKKTE 400 (547)
Q Consensus 380 sk~Eta-----~eaV~~m~~I~~~aE 400 (547)
. .+.- -+.++....|+..+.
T Consensus 114 ~-~P~y~~~s~~~l~~~f~~va~a~~ 138 (306)
T 1o5k_A 114 V-TPYYNKPTQEGLYQHYKYISERTD 138 (306)
T ss_dssp E-CCCSSCCCHHHHHHHHHHHHTTCS
T ss_pred C-CCCCCCCCHHHHHHHHHHHHHhCC
Confidence 6 4432 266777777765543
No 470
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=30.55 E-value=2.5e+02 Score=28.19 Aligned_cols=118 Identities=20% Similarity=0.211 Sum_probs=67.6
Q ss_pred HHHHHcCCcEEEE------------------cccCChhhH-HHH-HHHHHhcCCCceEEEEecCHHHHhhHHHHHhh---
Q psy6272 246 DLIVREAVDIIIM------------------SSVTGANSI-REM-RGMLEDHVDRVLILAKIETLLGMEYMDEIIME--- 302 (547)
Q Consensus 246 ~~~~~~g~d~I~~------------------sfV~sa~di-~~~-r~~l~~~~~~i~IiakIEt~~av~nldeIl~~--- 302 (547)
+++-.-|+|+|++ || .+++++ .++ ++.| ..-+++.++|++.-.+-..+.+.+++.
T Consensus 42 k~~e~gGaDlii~ynsGrfR~~G~~slag~lpy-gnaN~iv~e~~~evl-p~v~~iPV~Agv~~~DP~~~~g~~Le~lk~ 119 (286)
T 2p10_A 42 KSEEAGDIDLIVIYNSGRYRMAGRGSLAGLLAY-GNANQIVVDMAREVL-PVVRHTPVLAGVNGTDPFMVMSTFLRELKE 119 (286)
T ss_dssp HHHHHTTCSEEEECHHHHHHHTTCCGGGGGBTE-EEHHHHHHHHHHHHG-GGCSSSCEEEEECTTCTTCCHHHHHHHHHH
T ss_pred HHHHhCCCCEEEEeccchhhhcCccchhhhccc-cCHHHHHHHHHHhhh-ccCCCCCEEEEECCcCCCcCHHHHHHHHHH
Confidence 5677789999986 34 233332 222 2233 234589999999887777777777644
Q ss_pred --cCEEEEcCCcccccCC-----hHH--H-HHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHh
Q psy6272 303 --SDGVVLNRIQLAVATS-----VEV--T-FLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQD 372 (547)
Q Consensus 303 --~DgImIargDLg~e~~-----~e~--v-~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~ 372 (547)
..|+ +.=-=.|.-=| +|+ + ..-.-++|++|++.|.-.+..+. +.+|. ......
T Consensus 120 ~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~~v~-----~~eeA-----------~amA~a 182 (286)
T 2p10_A 120 IGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTPYVF-----SPEDA-----------VAMAKA 182 (286)
T ss_dssp HTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECCEEC-----SHHHH-----------HHHHHH
T ss_pred hCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEEecC-----CHHHH-----------HHHHHc
Confidence 4788 55320000000 011 0 11223588899999988776533 22233 334456
Q ss_pred CccEEeeCCc
Q psy6272 373 GADVVVLTQS 382 (547)
Q Consensus 373 g~D~vmLsk~ 382 (547)
|+|.+..--+
T Consensus 183 gpDiI~~h~g 192 (286)
T 2p10_A 183 GADILVCHMG 192 (286)
T ss_dssp TCSEEEEECS
T ss_pred CCCEEEECCC
Confidence 9999988633
No 471
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=30.54 E-value=4e+02 Score=26.15 Aligned_cols=98 Identities=9% Similarity=-0.013 Sum_probs=58.4
Q ss_pred HHHHHHHHcCCcEEEEcccCC--------h--------hhHHHHHHHHHhcCCCceEEEEecC------HHHHhhHHHHH
Q psy6272 243 HVVDLIVREAVDIIIMSSVTG--------A--------NSIREMRGMLEDHVDRVLILAKIET------LLGMEYMDEII 300 (547)
Q Consensus 243 ~di~~~~~~g~d~I~~sfV~s--------a--------~di~~~r~~l~~~~~~i~IiakIEt------~~av~nldeIl 300 (547)
+.++..-+.|+|..+++-... + ..=+.+.++..+..+...-++-+-. ..+++.|+..+
T Consensus 53 ~~l~~md~~GV~~~vl~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~p~rf~~~~~~p~~~~~~~~~a~~eL~r~~ 132 (350)
T 2gwg_A 53 NQLKKMQERGSDLTVFSPRASFMAHHIGDFNVSSTWAAICNELCYRVSQLFPDNFIGAAMLPQSPGVDPKTCIPELEKCV 132 (350)
T ss_dssp THHHHHHHHTCCEEEEECCC-------CCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECCCCTTSCGGGGHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEEcCCchhhccccCCHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHH
Confidence 346777789999988875432 1 1112233334443445555666531 46778888877
Q ss_pred hh--cCEEEEcCCccc-----ccCChHHHHHHHHHHHHHHHHcCCcEEEEc
Q psy6272 301 ME--SDGVVLNRIQLA-----VATSVEVTFLAQKMIAARCNKQGKPFLVVG 344 (547)
Q Consensus 301 ~~--~DgImIargDLg-----~e~~~e~v~~~qk~ii~~c~~~gKPvi~aT 344 (547)
.. ..||-++..--+ ..+.-+ .-..+.++|+++|+||++.+
T Consensus 133 ~~~g~~Gv~l~~~~~~~~~~~~~l~d~----~~~p~~~~a~e~~lpv~iH~ 179 (350)
T 2gwg_A 133 KEYGFVAINLNPDPSGGHWTSPPLTDR----IWYPIYEKMVELEIPAMIHV 179 (350)
T ss_dssp HTSCCCEEEECSCTTSSCCCSCCTTSG----GGHHHHHHHHHHTCCEEECC
T ss_pred hccCCeEEEECCCCCCccCCCCCCCCH----HHHHHHHHHHHcCCeEEECC
Confidence 54 589988753111 122222 23457888999999999854
No 472
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=30.40 E-value=1.4e+02 Score=28.69 Aligned_cols=48 Identities=17% Similarity=0.142 Sum_probs=31.3
Q ss_pred HHHHHhhcCEEEEcCCc------cccc----CC--hHHHHHHHHHHHHHHHHcCCcEEEE
Q psy6272 296 MDEIIMESDGVVLNRIQ------LAVA----TS--VEVTFLAQKMIAARCNKQGKPFLVV 343 (547)
Q Consensus 296 ldeIl~~~DgImIargD------Lg~e----~~--~e~v~~~qk~ii~~c~~~gKPvi~a 343 (547)
+++++...|||++.-|. ++-+ ++ -+.-......+++.+.+.+||++--
T Consensus 55 ~~~~l~~~DGlil~GG~~v~P~~yg~~~~~~~~~~~~~rd~~~~~lir~a~~~~~PiLGI 114 (254)
T 3fij_A 55 AVQAISLVDGLLLTGGQDITPQLYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAI 114 (254)
T ss_dssp HHHHHHTCSEEEECCCSCCCGGGGTCCCCTTCCCCCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHhhCCEEEECCCCCCChhhcCCccCcccCCcChhhhHHHHHHHHHHHHcCCCEEEE
Confidence 66777789999999872 1111 11 1223344567888899999998754
No 473
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=30.37 E-value=2e+02 Score=26.80 Aligned_cols=80 Identities=8% Similarity=0.198 Sum_probs=40.3
Q ss_pred EEEcccCCh---hhHHHHHHHHHhcCCCceEEEEecCH-HHHhhHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHH
Q psy6272 256 IIMSSVTGA---NSIREMRGMLEDHVDRVLILAKIETL-LGMEYMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIA 330 (547)
Q Consensus 256 I~~sfV~sa---~di~~~r~~l~~~~~~i~IiakIEt~-~av~nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii 330 (547)
+++|...++ +-++.+.+.+.+.|-++.+..-=.+. .-.+.++.++.. +|||++.+.+.. .+ ...+
T Consensus 6 vi~~~~~~~f~~~~~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~------~~----~~~~ 75 (283)
T 2ioy_A 6 LVISTLNNPFFVTLKNGAEEKAKELGYKIIVEDSQNDSSKELSNVEDLIQQKVDVLLINPVDSD------AV----VTAI 75 (283)
T ss_dssp EEESCSSSHHHHHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEECCSSTT------TT----HHHH
T ss_pred EEecCCCCHHHHHHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHHHHcCCCEEEEeCCchh------hh----HHHH
Confidence 344444443 22334444555555554433211122 123445555544 799999865432 11 1134
Q ss_pred HHHHHcCCcEEEEcC
Q psy6272 331 ARCNKQGKPFLVVGD 345 (547)
Q Consensus 331 ~~c~~~gKPvi~aTq 345 (547)
+.++++|+|+++...
T Consensus 76 ~~~~~~~iPvV~~~~ 90 (283)
T 2ioy_A 76 KEANSKNIPVITIDR 90 (283)
T ss_dssp HHHHHTTCCEEEESS
T ss_pred HHHHHCCCeEEEecC
Confidence 556789999987643
No 474
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=30.14 E-value=2.1e+02 Score=27.65 Aligned_cols=101 Identities=9% Similarity=0.007 Sum_probs=61.9
Q ss_pred HHHHHHHHHcCCcEEEEcc----cC------ChhhHHHHHHHHHhcCCCceEEEE-e----------c------------
Q psy6272 242 KHVVDLIVREAVDIIIMSS----VT------GANSIREMRGMLEDHVDRVLILAK-I----------E------------ 288 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sf----V~------sa~di~~~r~~l~~~~~~i~Iiak-I----------E------------ 288 (547)
.+.++.+.+.|+|+|-+.. +. +.+++.++++.+++.|-.+..+.- . .
T Consensus 18 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~g~~~~~p~~~~~~~~~~~~~l~ 97 (340)
T 2zds_A 18 EEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPARIW 97 (340)
T ss_dssp HHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEEEEEHHHHHHHHCSCCSHHHHHHSCHHHH
T ss_pred HHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEEeecccccccccccccccccccccccccc
Confidence 3448899999999998874 22 345688999999887655433221 1 0
Q ss_pred ---C-----HHHHhhHHHHHhh-----cCEEEEcCCcccc--------------cCChHHHHHHHHHHHHHHHHcCCcEE
Q psy6272 289 ---T-----LLGMEYMDEIIME-----SDGVVLNRIQLAV--------------ATSVEVTFLAQKMIAARCNKQGKPFL 341 (547)
Q Consensus 289 ---t-----~~av~nldeIl~~-----~DgImIargDLg~--------------e~~~e~v~~~qk~ii~~c~~~gKPvi 341 (547)
+ .++++.+...+.. ++.|.+..|.... +-.++.+...-+++...|.++|..+.
T Consensus 98 ~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~ 177 (340)
T 2zds_A 98 GDGDAEGVRQRAAAEIKDTARAAARLGVDTVIGFTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEGVRFA 177 (340)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEECCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 1 2345556555555 3677776554321 11123444555677788888898777
Q ss_pred E
Q psy6272 342 V 342 (547)
Q Consensus 342 ~ 342 (547)
+
T Consensus 178 l 178 (340)
T 2zds_A 178 H 178 (340)
T ss_dssp E
T ss_pred E
Confidence 6
No 475
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=30.10 E-value=2.2e+02 Score=27.09 Aligned_cols=42 Identities=10% Similarity=0.201 Sum_probs=27.6
Q ss_pred hhHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcC
Q psy6272 294 EYMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGD 345 (547)
Q Consensus 294 ~nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq 345 (547)
+.++.++.. .|||++.+.|-. .....+..++++|+||++...
T Consensus 50 ~~i~~~~~~~vdgiIi~~~~~~----------~~~~~~~~~~~~giPvV~~~~ 92 (330)
T 3uug_A 50 SQIENMVTKGVKVLVIASIDGT----------TLSDVLKQAGEQGIKVIAYDR 92 (330)
T ss_dssp HHHHHHHHHTCSEEEECCSSGG----------GGHHHHHHHHHTTCEEEEESS
T ss_pred HHHHHHHHcCCCEEEEEcCCch----------hHHHHHHHHHHCCCCEEEECC
Confidence 345555444 799999876632 122355668889999998654
No 476
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=30.06 E-value=86 Score=28.33 Aligned_cols=56 Identities=7% Similarity=0.068 Sum_probs=40.9
Q ss_pred HHHHhhHHHHHhh---cC--EEEEcCCcc----cccCChHHHHHHHHHHHHHHHHcCCcEEEEcC
Q psy6272 290 LLGMEYMDEIIME---SD--GVVLNRIQL----AVATSVEVTFLAQKMIAARCNKQGKPFLVVGD 345 (547)
Q Consensus 290 ~~av~nldeIl~~---~D--gImIargDL----g~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq 345 (547)
...+..+++++.. .| .|++|-.|+ ....+.+.+....+++++.++++|.++++.|.
T Consensus 57 ~~~~~~~~~~~~~~~~pd~vvi~~G~ND~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~vil~~~ 121 (240)
T 3mil_A 57 RWALKILPEILKHESNIVMATIFLGANDACSAGPQSVPLPEFIDNIRQMVSLMKSYHIRPIIIGP 121 (240)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEEECCTTTTSSSSTTCCCHHHHHHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHhcccCCCCEEEEEeecCcCCccCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEcC
Confidence 3455566666653 46 445667788 45667788888888999999999999888775
No 477
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=30.06 E-value=47 Score=31.70 Aligned_cols=81 Identities=15% Similarity=0.125 Sum_probs=52.4
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEE-EEecCHHHHhhHHHHHhh-cCEEEEcCCcccccCCh
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLIL-AKIETLLGMEYMDEIIME-SDGVVLNRIQLAVATSV 319 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~Ii-akIEt~~av~nldeIl~~-~DgImIargDLg~e~~~ 319 (547)
.+..+.+.+.|+|++.+| ...++++..+|+.+. . ..++ .-|=- ++ .++.+.++. +|.+++||+=+..+=|.
T Consensus 118 ~~~a~~a~~~G~~GvV~s-at~~~e~~~ir~~~~---~-f~~v~pGI~~-~g-~~~~~a~~~Gad~iVvGr~I~~a~dp~ 190 (215)
T 3ve9_A 118 PYLREVARRVNPKGFVAP-ATRPSMISRVKGDFP---D-KLVISPGVGT-QG-AKPGIALCHGADYEIVGRSVYQSADPV 190 (215)
T ss_dssp HHHHHHHHHHCCSEEECC-TTSHHHHHHHHHHCT---T-SEEEECCTTS-TT-CCTTHHHHTTCSEEEECHHHHTSSSHH
T ss_pred HHHHHHHHHcCCCceeeC-CCCHHHHHHHHHhCC---C-cEEEcCCCCc-Cc-CCHHHHHHcCCCEEEeCHHHcCCCCHH
Confidence 445667888999999887 344788888888653 3 3333 33421 11 135555555 89999999988877666
Q ss_pred HHHHHHHHHH
Q psy6272 320 EVTFLAQKMI 329 (547)
Q Consensus 320 e~v~~~qk~i 329 (547)
+....+++++
T Consensus 191 ~a~~~i~~~i 200 (215)
T 3ve9_A 191 RKLEEIVRSQ 200 (215)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555544444
No 478
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=29.99 E-value=1.2e+02 Score=28.54 Aligned_cols=42 Identities=12% Similarity=0.287 Sum_probs=27.0
Q ss_pred hhHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcC
Q psy6272 294 EYMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGD 345 (547)
Q Consensus 294 ~nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq 345 (547)
+.++.++.. .|||++.+.+... ....+..+.++|+|+++...
T Consensus 52 ~~i~~l~~~~vdgiIi~~~~~~~----------~~~~~~~~~~~~iPvV~~~~ 94 (305)
T 3g1w_A 52 TVLEQAIAKNPAGIAISAIDPVE----------LTDTINKAVDAGIPIVLFDS 94 (305)
T ss_dssp HHHHHHHHHCCSEEEECCSSTTT----------THHHHHHHHHTTCCEEEESS
T ss_pred HHHHHHHHhCCCEEEEcCCCHHH----------HHHHHHHHHHCCCcEEEECC
Confidence 344444444 7999998766431 12245667789999998654
No 479
>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}
Probab=29.92 E-value=2.2e+02 Score=26.59 Aligned_cols=96 Identities=11% Similarity=0.036 Sum_probs=57.5
Q ss_pred HHHHHHHHHcCCcEEEEcccCC----------hhhHHHHHHHHHhcCC-CceEEEE----e----c-CHHHHhhHHHHHh
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTG----------ANSIREMRGMLEDHVD-RVLILAK----I----E-TLLGMEYMDEIIM 301 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~s----------a~di~~~r~~l~~~~~-~i~Iiak----I----E-t~~av~nldeIl~ 301 (547)
.+.++.+.+.|+|+|-+ |..+ .++++++++.+++.|- .+.+.+- + + ...+++.+...+.
T Consensus 17 ~~~~~~~~~~G~~~vEl-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~~~~~~l~s~~~~r~~~~~~~~~~i~ 95 (270)
T 3aam_A 17 AGAVEEATALGLTAFQI-FAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHASYLVNLGAEGELWEKSVASLADDLE 95 (270)
T ss_dssp HHHHHHHHHHTCSCEEE-ESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEECCTTCCTTCSSTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEE-eCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEecCcccCCCCCHHHHHHHHHHHHHHHH
Confidence 45678999999999988 5543 4688999999988764 3332221 0 0 1224555555554
Q ss_pred h-----cCEEEEcCCcccccCChHHHHHHHHHHHHHHH-HcCCcEEE
Q psy6272 302 E-----SDGVVLNRIQLAVATSVEVTFLAQKMIAARCN-KQGKPFLV 342 (547)
Q Consensus 302 ~-----~DgImIargDLg~e~~~e~v~~~qk~ii~~c~-~~gKPvi~ 342 (547)
. +..+.+-+|.. +.+.+...-+++...+. +.|..+.+
T Consensus 96 ~a~~lGa~~vv~h~g~~----~~~~~~~~l~~l~~~a~~~~gv~l~l 138 (270)
T 3aam_A 96 KAALLGVEYVVVHPGSG----RPERVKEGALKALRLAGVRSRPVLLV 138 (270)
T ss_dssp HHHHHTCCEEEECCCBS----CHHHHHHHHHHHHHHHTCCSSSEEEE
T ss_pred HHHHcCCCEEEECCCCC----CHHHHHHHHHHHHHhhcccCCCEEEE
Confidence 4 25666655554 22555555556666665 56665554
No 480
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=29.90 E-value=1.6e+02 Score=23.53 Aligned_cols=62 Identities=13% Similarity=-0.019 Sum_probs=39.9
Q ss_pred HHHHHHhcCCcEEEEEc----CCchH-HHHHHhc--CCCCCEEEEeCchhccccccccccceEEeecCC
Q psy6272 430 CVNAALKCQAVAIIVIT----CSGYS-AKLVSKY--RPQCPILAVSSLGYVCRHLNVYRNIRPLHYIRN 491 (547)
Q Consensus 430 av~~a~~~~a~aIvv~T----~sG~t-A~~isk~--RP~~pIiavt~~~~~ar~l~l~~GV~p~~~~~~ 491 (547)
|.+...+...+.|++=. .+|.. .+.+.+. .|.+||+++|..........+..|+.-++.++.
T Consensus 39 a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~g~~~~l~KP~ 107 (127)
T 3i42_A 39 ALHAMSTRGYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFVAVSGFAKNDLGKEACELFDFYLEKPI 107 (127)
T ss_dssp HHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEEEEECC-CTTCCHHHHHHCSEEEESSC
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhhhccCCCCEEEEECCcchhHHHHHHHhhHHheeCCC
Confidence 34444556778776642 34433 3455555 688999999998766655567788888887653
No 481
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=29.88 E-value=1.2e+02 Score=30.34 Aligned_cols=95 Identities=11% Similarity=-0.012 Sum_probs=53.7
Q ss_pred HHHHHHHHHcCCcEEEEccc-----------CC-------------hhhHHHHHHHHHhcCCCceEEE--EecCHHHHhh
Q psy6272 242 KHVVDLIVREAVDIIIMSSV-----------TG-------------ANSIREMRGMLEDHVDRVLILA--KIETLLGMEY 295 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV-----------~s-------------a~di~~~r~~l~~~~~~i~Iia--kIEt~~av~n 295 (547)
.++.+.+.+.|+|+|.+|-- +. ...+..+.+.....+ ++.||+ .|-|.+-+..
T Consensus 195 ~e~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~-~ipvia~GGI~~~~d~~k 273 (332)
T 1vcf_A 195 REAALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLP-HLPLVASGGVYTGTDGAK 273 (332)
T ss_dssp HHHHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCS-SSCEEEESSCCSHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcC-CCeEEEECCCCCHHHHHH
Confidence 34577889999999999642 11 012222333222222 577777 5655444332
Q ss_pred HHHHHhhcCEEEEcCCccccc-CChH----HHHHHHHHHHHHHHHcCCc
Q psy6272 296 MDEIIMESDGVVLNRIQLAVA-TSVE----VTFLAQKMIAARCNKQGKP 339 (547)
Q Consensus 296 ldeIl~~~DgImIargDLg~e-~~~e----~v~~~qk~ii~~c~~~gKP 339 (547)
. |..-+|+|++||.-|-.. -|.+ .+..+.+.+-..+...|..
T Consensus 274 a--l~~GAd~V~igr~~l~~~~~G~~gv~~~~~~l~~el~~~m~~~G~~ 320 (332)
T 1vcf_A 274 A--LALGADLLAVARPLLRPALEGAERVAAWIGDYLEELRTALFAIGAR 320 (332)
T ss_dssp H--HHHTCSEEEECGGGHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred H--HHhCCChHhhhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 2 233389999999877322 2332 3444556666666666654
No 482
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=29.74 E-value=73 Score=32.37 Aligned_cols=69 Identities=14% Similarity=0.249 Sum_probs=41.0
Q ss_pred HHHHHHHHHcCCcEEEEcccCC-------------hhhHHHHHHHHHhcCCCceEEE--EecCHHHHhhHHHHHhhcCEE
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTG-------------ANSIREMRGMLEDHVDRVLILA--KIETLLGMEYMDEIIMESDGV 306 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~s-------------a~di~~~r~~l~~~~~~i~Iia--kIEt~~av~nldeIl~~~DgI 306 (547)
.+.++.+.+.|+|+|.++--.. ..+...++..-+. -.++.||+ -|-|.+-++. +++-+|+|
T Consensus 147 ~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~-~~~iPVianGgI~s~eda~~---~l~GaD~V 222 (350)
T 3b0p_A 147 AQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGD-FPQLTFVTNGGIRSLEEALF---HLKRVDGV 222 (350)
T ss_dssp HHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHH-CTTSEEEEESSCCSHHHHHH---HHTTSSEE
T ss_pred HHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHh-CCCCeEEEECCcCCHHHHHH---HHhCCCEE
Confidence 3445677889999999974221 0133333333222 12567776 4666554443 33358999
Q ss_pred EEcCCccc
Q psy6272 307 VLNRIQLA 314 (547)
Q Consensus 307 mIargDLg 314 (547)
||||+=|+
T Consensus 223 ~iGRa~l~ 230 (350)
T 3b0p_A 223 MLGRAVYE 230 (350)
T ss_dssp EECHHHHH
T ss_pred EECHHHHh
Confidence 99998665
No 483
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=29.70 E-value=24 Score=36.62 Aligned_cols=35 Identities=23% Similarity=0.396 Sum_probs=30.9
Q ss_pred hcCCcEEEEEcCCchHHHHHHh----cCCCCCEEEEeCc
Q psy6272 436 KCQAVAIIVITCSGYSAKLVSK----YRPQCPILAVSSL 470 (547)
Q Consensus 436 ~~~a~aIvv~T~sG~tA~~isk----~RP~~pIiavt~~ 470 (547)
+..|+.+||-|.||.||-.+|. ..|..+.+.+||=
T Consensus 244 ~~~aDGlIVSTPTGSTAYslSAGGPIv~P~~~~i~ltPI 282 (365)
T 3pfn_A 244 TVQGDGVIVSTPTGSTAYAAAAGASMIHPNVPAIMITPI 282 (365)
T ss_dssp EECSSEEEEECGGGGGTHHHHTTCCEECTTSCCEEEEEE
T ss_pred EEecCeEEEeCCccHHHHHHhCCCCccCCCCCeEEEEec
Confidence 4689999999999999999997 4888999998874
No 484
>3ry7_A Ribokinase; transferase; 2.15A {Staphylococcus aureus}
Probab=29.50 E-value=3.7e+02 Score=25.50 Aligned_cols=110 Identities=10% Similarity=0.033 Sum_probs=63.8
Q ss_pred HHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCC-----------ce-EEEEec-----------------CHHHHhhH
Q psy6272 246 DLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDR-----------VL-ILAKIE-----------------TLLGMEYM 296 (547)
Q Consensus 246 ~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~-----------i~-IiakIE-----------------t~~av~nl 296 (547)
..+...|.+..++++|-+-..=+.+++.|.+.|-+ +. -+..++ +++-++.+
T Consensus 48 ~~la~lG~~~~~~~~vG~D~~g~~i~~~l~~~gv~~~~v~~~~~~~T~~~~~~~~~~g~~~~~~~~ga~~~~~~~~~~~~ 127 (304)
T 3ry7_A 48 IATARMQADTTFITKIGTDGVADFILEDFKVAHIDTSYIIKTAEAKTGQAFITVNAEGQNTIYVYGGANMTMTPEDVINA 127 (304)
T ss_dssp HHHHHTTCEEEEECEEESSCTTHHHHHHHHHTTCBCTTCEEESSSCCEEEEEEECSSCCEEEEEECGGGGGCCHHHHHTT
T ss_pred HHHHHCCCCeEEEEEeCCChHHHHHHHHHHHcCCcchhEEEcCCCCCcEEEEEECCCCCEEEEEecCchhcCCHHHHHHH
Confidence 34445788888888887654455666666443211 00 011111 12223334
Q ss_pred HHHHhhcCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccE
Q psy6272 297 DEIIMESDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADV 376 (547)
Q Consensus 297 deIl~~~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~ 376 (547)
.+.++.+|.+++. + +.+ .....++++.|+++|+|+++ +|... .+....++..+|.
T Consensus 128 ~~~~~~~~~v~~~-~----~~~----~~~~~~~~~~a~~~~~~v~~------D~~~~----------~~~~~~ll~~~di 182 (304)
T 3ry7_A 128 KDAIINADFVVAQ-L----EVP----IPAIISAFEIAKAHGVTTVL------NPAPA----------KALPNELLSLIDI 182 (304)
T ss_dssp HHHHHTCSEEEEE-T----TSC----HHHHHHHHHHHHHTTCEEEE------ECCSC----------CCCCHHHHTTCSE
T ss_pred HHHhccCCEEEEc-C----CCC----HHHHHHHHHHHHHcCCEEEE------eCCcc----------ccccHHHHHhCCE
Confidence 4567778999886 2 223 23445678889999999988 55432 1122345678999
Q ss_pred EeeC
Q psy6272 377 VVLT 380 (547)
Q Consensus 377 vmLs 380 (547)
+..+
T Consensus 183 l~~N 186 (304)
T 3ry7_A 183 IVPN 186 (304)
T ss_dssp ECCB
T ss_pred EecC
Confidence 9999
No 485
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=29.49 E-value=67 Score=32.63 Aligned_cols=62 Identities=8% Similarity=0.110 Sum_probs=41.3
Q ss_pred CceEEEecCCCCCCH----HHHHHHHHhCCcEEeec-cCCCHHHHHHHHHHHHHHHHHHhccccccceeeEEEEecC
Q psy6272 54 LTNIMATVGENNNSV----DLIKLMLRSGVNILRIP-THSSKLYQVEKILKNVKLAIEEVSLEECKVVTCAVAIETK 125 (547)
Q Consensus 54 ~tkIi~TiGpas~~~----e~l~~li~aGm~v~RiN-sHg~~e~~~~~~i~~ir~a~~~~~~~~~~~~~i~I~~Dl~ 125 (547)
+....+|.|....++ +..+++.++|.+.+.|+ .|++.+.-.+ .++.+|++. +..+.|++|..
T Consensus 133 ~v~~y~~~~~~~~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e-~v~avr~a~---------G~d~~l~vDan 199 (371)
T 2ovl_A 133 VVPVYAGGIDLELPVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVD-RVSALREHL---------GDSFPLMVDAN 199 (371)
T ss_dssp EEEEEEECCBTTSCHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHH-HHHHHHHHH---------CTTSCEEEECT
T ss_pred CeeEEEeCCCcCCCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHH-HHHHHHHHh---------CCCCeEEEECC
Confidence 345556654322244 34567788999999999 9988877777 788887763 22345667764
No 486
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=29.46 E-value=45 Score=25.32 Aligned_cols=44 Identities=16% Similarity=0.251 Sum_probs=27.9
Q ss_pred cCCCCEEEEec----eeEEEEEEEeCCeEEEEEEeCcEeCCCceeeeCCCC
Q psy6272 185 VIPDDIVYIDR----NIKLKVVEKENNDVHCTVIRGGKLMDNQLVTVPRVT 231 (547)
Q Consensus 185 v~~Gd~I~idD----~I~l~V~~v~~~~v~~~V~~gG~L~s~Kginlp~~~ 231 (547)
+++||.|-|-+ -+..+|.+++.+.+...+.-.|. + ..+.+|-.+
T Consensus 8 f~~GD~V~V~~Gpf~g~~G~V~evd~e~v~V~v~~fg~--~-tpvel~~~q 55 (59)
T 2e6z_A 8 FQPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDL--K-DMLEFPAQE 55 (59)
T ss_dssp CCTTSEEEECSSTTTTCEEEECCCBTTEEEEEECCSSC--C-SCEEEETTT
T ss_pred CCCCCEEEEeecCCCCCEEEEEEEeCCEEEEEEEecCC--C-ceEEEcHHH
Confidence 46677777666 56778888888766666655554 1 256655443
No 487
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=29.46 E-value=2.3e+02 Score=22.99 Aligned_cols=114 Identities=10% Similarity=0.127 Sum_probs=56.7
Q ss_pred CChhhHHHHHHHHHhcCCCceEEEEecC-HHHHhhHHHHH--------hhcCEEEEcCCcccccCChHHHHHHHHHHHHH
Q psy6272 262 TGANSIREMRGMLEDHVDRVLILAKIET-LLGMEYMDEII--------MESDGVVLNRIQLAVATSVEVTFLAQKMIAAR 332 (547)
Q Consensus 262 ~sa~di~~~r~~l~~~~~~i~IiakIEt-~~av~nldeIl--------~~~DgImIargDLg~e~~~e~v~~~qk~ii~~ 332 (547)
.+......++..|.+.+....+. ...+ .++++.+.+-- ...|.|++. -++.-.-|++-+ +++-..
T Consensus 14 d~~~~~~~l~~~L~~~g~~~~v~-~~~~~~~al~~l~~~~~~~~~~~~~~~dlvi~D-~~l~~~~g~~~~----~~l~~~ 87 (149)
T 1k66_A 14 DSDEDFSTFQRLLQREGVVNPIY-RCITGDQALDFLYQTGSYCNPDIAPRPAVILLD-LNLPGTDGREVL----QEIKQD 87 (149)
T ss_dssp CCHHHHHHHHHHHHHTTBCSCEE-EECSHHHHHHHHHTCCSSSCGGGCCCCSEEEEC-SCCSSSCHHHHH----HHHTTS
T ss_pred CCHHHHHHHHHHHHHcCCCceEE-EECCHHHHHHHHHhcccccCcccCCCCcEEEEE-CCCCCCCHHHHH----HHHHhC
Confidence 45556677788887765422222 2333 22333222100 235888876 222211122111 112111
Q ss_pred HHHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHHH
Q psy6272 333 CNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEIL 396 (547)
Q Consensus 333 c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I~ 396 (547)
....+.|+++.|. .++ . .+...+...|++.++.. .-+..+-.+.+.+++
T Consensus 88 ~~~~~~~ii~~t~---~~~---~--------~~~~~~~~~g~~~~l~k-P~~~~~l~~~i~~~~ 136 (149)
T 1k66_A 88 EVLKKIPVVIMTT---SSN---P--------KDIEICYSYSISSYIVK-PLEIDRLTETVQTFI 136 (149)
T ss_dssp TTGGGSCEEEEES---CCC---H--------HHHHHHHHTTCSEEEEC-CSSHHHHHHHHHHHH
T ss_pred cccCCCeEEEEeC---CCC---H--------HHHHHHHHCCCCEEEeC-CCCHHHHHHHHHHHH
Confidence 1115678888765 222 3 55667888899999876 555444444444443
No 488
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=29.29 E-value=88 Score=29.10 Aligned_cols=71 Identities=15% Similarity=0.079 Sum_probs=43.3
Q ss_pred hHHHHHHHHHcCCcEEEEcccC---C------hhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh-cCEEEEcC
Q psy6272 241 DKHVVDLIVREAVDIIIMSSVT---G------ANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME-SDGVVLNR 310 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sfV~---s------a~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~-~DgImIar 310 (547)
+.+++..|. .|+|+|.++-+- + .-+...++.+.+....++.++|- =-. ..+|+.+.++. ++||-+++
T Consensus 97 t~~e~~~A~-~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviai-GGI-~~~nv~~~~~~Ga~gVav~s 173 (210)
T 3ceu_A 97 SVEEVKNRK-HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMAL-GGI-NEDNLLEIKDFGFGGAVVLG 173 (210)
T ss_dssp SHHHHHTTG-GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEE-SSC-CTTTHHHHHHTTCSEEEESH
T ss_pred CHHHHHHHh-hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEE-CCC-CHHHHHHHHHhCCCEEEEhH
Confidence 455577777 899999987652 1 12455566555431125666662 111 14688888887 79999986
Q ss_pred Cccc
Q psy6272 311 IQLA 314 (547)
Q Consensus 311 gDLg 314 (547)
+=..
T Consensus 174 ~i~~ 177 (210)
T 3ceu_A 174 DLWN 177 (210)
T ss_dssp HHHT
T ss_pred HhHc
Confidence 5433
No 489
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=29.27 E-value=2.2e+02 Score=22.74 Aligned_cols=111 Identities=17% Similarity=0.176 Sum_probs=56.7
Q ss_pred CChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHh--------hcCEEEEcCCcccccCChHHHHHHHHHHHHHH
Q psy6272 262 TGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIM--------ESDGVVLNRIQLAVATSVEVTFLAQKMIAARC 333 (547)
Q Consensus 262 ~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~--------~~DgImIargDLg~e~~~e~v~~~qk~ii~~c 333 (547)
.+......++..|.+.|....+. ...+.+ +-++.+-. ..|.|++. .++.-.-|++-+.. +-...
T Consensus 10 d~~~~~~~l~~~L~~~~~~~~v~-~~~~~~--~a~~~l~~~~~~~~~~~~dlvi~d-~~~~~~~g~~~~~~----l~~~~ 81 (140)
T 1k68_A 10 DNKADIRLIQEALANSTVPHEVV-TVRDGM--EAMAYLRQEGEYANASRPDLILLX-LNLPKKDGREVLAE----IKSDP 81 (140)
T ss_dssp CCHHHHHHHHHHHHTCSSCCEEE-EECSHH--HHHHHHTTCGGGGSCCCCSEEEEC-SSCSSSCHHHHHHH----HHHST
T ss_pred CCHHHHHHHHHHHHhcCCCceEE-EECCHH--HHHHHHHcccccccCCCCcEEEEe-cCCCcccHHHHHHH----HHcCc
Confidence 45566677788887765432222 333322 22222222 35888886 22321112222211 21111
Q ss_pred HHcCCcEEEEcCCCCCCCcccccccCccchhhHHHHHHhCccEEeeCCcchHHHHHHHHHHH
Q psy6272 334 NKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQDGADVVVLTQSEQAHHRVDILKEI 395 (547)
Q Consensus 334 ~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~g~D~vmLsk~Eta~eaV~~m~~I 395 (547)
...+.|+++.|. ..+ . .+...+...|++.++.. .-+..+-.+.+.++
T Consensus 82 ~~~~~pii~ls~---~~~---~--------~~~~~~~~~g~~~~l~k-P~~~~~l~~~i~~~ 128 (140)
T 1k68_A 82 TLKRIPVVVLST---SIN---E--------DDIFHSYDLHVNCYITK-SANLSQLFQIVKGI 128 (140)
T ss_dssp TGGGSCEEEEES---CCC---H--------HHHHHHHHTTCSEEEEC-CSSHHHHHHHHHHH
T ss_pred ccccccEEEEec---CCc---H--------HHHHHHHHhchhheecC-CCCHHHHHHHHHHH
Confidence 125689988765 222 3 55677888899999876 54444444444444
No 490
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=29.27 E-value=1.9e+02 Score=28.35 Aligned_cols=82 Identities=12% Similarity=0.107 Sum_probs=46.2
Q ss_pred cCEEEEcCCcc--cccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEee
Q psy6272 303 SDGVVLNRIQL--AVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVL 379 (547)
Q Consensus 303 ~DgImIargDL--g~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmL 379 (547)
+||+++. |=- +..+..++-..+-+..++.++ -..||+..+. ..+-.|. -+.+ .|-..|+|++|+
T Consensus 36 v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pvi~Gvg---~~~t~~a--------i~la~~a~~~Gadavlv 102 (291)
T 3a5f_A 36 TDAIIVC-GTTGEATTMTETERKETIKFVIDKVN-KRIPVIAGTG---SNNTAAS--------IAMSKWAESIGVDGLLV 102 (291)
T ss_dssp CCEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC---CSSHHHH--------HHHHHHHHHTTCSEEEE
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEeCC---cccHHHH--------HHHHHHHHhcCCCEEEE
Confidence 6999886 322 233444554444554555543 2589998776 4444455 3333 345569999999
Q ss_pred CCcchH-----HHHHHHHHHHHHH
Q psy6272 380 TQSEQA-----HHRVDILKEILKK 398 (547)
Q Consensus 380 sk~Eta-----~eaV~~m~~I~~~ 398 (547)
. .+.- -+.++....|+..
T Consensus 103 ~-~P~y~~~s~~~l~~~f~~ia~a 125 (291)
T 3a5f_A 103 I-TPYYNKTTQKGLVKHFKAVSDA 125 (291)
T ss_dssp E-CCCSSCCCHHHHHHHC-CTGGG
T ss_pred c-CCCCCCCCHHHHHHHHHHHHHh
Confidence 6 4432 2555555555443
No 491
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=29.22 E-value=1.7e+02 Score=29.09 Aligned_cols=84 Identities=10% Similarity=0.088 Sum_probs=50.8
Q ss_pred cCEEEEcCCc--ccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEee
Q psy6272 303 SDGVVLNRIQ--LAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVL 379 (547)
Q Consensus 303 ~DgImIargD--Lg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmL 379 (547)
+|||++. |= =+..+..++-..+-+..++.++ -..||+..+. ..+-+|. -+.+ .|-..|+|++|+
T Consensus 50 v~gi~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGvg---~~~t~~a--------i~la~~a~~~Gadavlv 116 (304)
T 3l21_A 50 CDGLVVS-GTTGESPTTTDGEKIELLRAVLEAVG-DRARVIAGAG---TYDTAHS--------IRLAKACAAEGAHGLLV 116 (304)
T ss_dssp CSEEEES-STTTTGGGSCHHHHHHHHHHHHHHHT-TTSEEEEECC---CSCHHHH--------HHHHHHHHHHTCSEEEE
T ss_pred CCEEEeC-ccccchhhCCHHHHHHHHHHHHHHhC-CCCeEEEeCC---CCCHHHH--------HHHHHHHHHcCCCEEEE
Confidence 6999886 32 2233444554444454555543 2579998776 4454555 3333 455569999999
Q ss_pred CCcch-----HHHHHHHHHHHHHHhh
Q psy6272 380 TQSEQ-----AHHRVDILKEILKKTE 400 (547)
Q Consensus 380 sk~Et-----a~eaV~~m~~I~~~aE 400 (547)
. .+. --+.++....|+..+.
T Consensus 117 ~-~P~y~~~s~~~l~~~f~~va~a~~ 141 (304)
T 3l21_A 117 V-TPYYSKPPQRGLQAHFTAVADATE 141 (304)
T ss_dssp E-CCCSSCCCHHHHHHHHHHHHTSCS
T ss_pred C-CCCCCCCCHHHHHHHHHHHHHhcC
Confidence 7 544 2277777777776664
No 492
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=28.94 E-value=1.5e+02 Score=29.98 Aligned_cols=92 Identities=11% Similarity=0.010 Sum_probs=59.0
Q ss_pred ChhhHH-HHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh--cCEEEEcCCccc
Q psy6272 238 ADRDKH-VVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME--SDGVVLNRIQLA 314 (547)
Q Consensus 238 t~~D~~-di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~--~DgImIargDLg 314 (547)
+..+.. .++..-+.|+ +|=-|+- ++..++.+-+. -++.|++ =|+....+.+.++++. +|+|++.++-.|
T Consensus 201 ~~~~a~~~~~~l~~~~i-~iE~P~~----~~~~~~~l~~~--~~iPI~~-de~i~~~~~~~~~i~~~~~d~v~ik~~~~G 272 (379)
T 2rdx_A 201 RVDNAIRLARATRDLDY-ILEQPCR----SYEECQQVRRV--ADQPMKL-DECVTGLHMAQRIVADRGAEICCLKISNLG 272 (379)
T ss_dssp CHHHHHHHHHHTTTSCC-EEECCSS----SHHHHHHHHTT--CCSCEEE-CTTCCSHHHHHHHHHHTCCSEEEEETTTTT
T ss_pred CHHHHHHHHHHHHhCCe-EEeCCcC----CHHHHHHHHhh--CCCCEEE-eCCcCCHHHHHHHHHcCCCCEEEEeccccC
Confidence 434433 3333344688 8877764 44444433221 2466654 4666667777777766 799999998887
Q ss_pred ccCChHHHHHHHHHHHHHHHHcCCcEEEEc
Q psy6272 315 VATSVEVTFLAQKMIAARCNKQGKPFLVVG 344 (547)
Q Consensus 315 ~e~~~e~v~~~qk~ii~~c~~~gKPvi~aT 344 (547)
- +..+. +++..|+++|.++.+.+
T Consensus 273 G------it~~~-~i~~~A~~~g~~~~~~~ 295 (379)
T 2rdx_A 273 G------LSKAR-RTRDFLIDNRMPVVAED 295 (379)
T ss_dssp S------HHHHH-HHHHHHHHTTCCEEEEC
T ss_pred C------HHHHH-HHHHHHHHcCCeEEEee
Confidence 3 33344 48899999999999864
No 493
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=28.80 E-value=2.9e+02 Score=27.06 Aligned_cols=85 Identities=14% Similarity=0.159 Sum_probs=51.8
Q ss_pred cCEEEEcCCccc--ccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEee
Q psy6272 303 SDGVVLNRIQLA--VATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVL 379 (547)
Q Consensus 303 ~DgImIargDLg--~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmL 379 (547)
+|||++. |=-| ..+..++-..+.+..++.++ -..||+..+. ..+-.|. -+.+ .|-..|+|++|+
T Consensus 37 v~gl~v~-GttGE~~~Lt~~Er~~v~~~~~~~~~-grvpviaGvg---~~~t~~a--------i~la~~a~~~Gadavlv 103 (292)
T 3daq_A 37 AQAIIVN-GTTAESPTLTTDEKELILKTVIDLVD-KRVPVIAGTG---TNDTEKS--------IQASIQAKALGADAIML 103 (292)
T ss_dssp CCEEEES-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCEEEECC---CSCHHHH--------HHHHHHHHHHTCSEEEE
T ss_pred CCEEEEC-ccccccccCCHHHHHHHHHHHHHHhC-CCCcEEEeCC---cccHHHH--------HHHHHHHHHcCCCEEEE
Confidence 6999986 3222 23334444444444555442 3579998776 4444555 3333 445569999999
Q ss_pred CCcchH-----HHHHHHHHHHHHHhhh
Q psy6272 380 TQSEQA-----HHRVDILKEILKKTES 401 (547)
Q Consensus 380 sk~Eta-----~eaV~~m~~I~~~aE~ 401 (547)
. .+.- -+.++....|+..+.-
T Consensus 104 ~-~P~y~~~~~~~l~~~f~~ia~a~~l 129 (292)
T 3daq_A 104 I-TPYYNKTNQRGLVKHFEAIADAVKL 129 (292)
T ss_dssp E-CCCSSCCCHHHHHHHHHHHHHHHCS
T ss_pred C-CCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 7 4432 2788888888877753
No 494
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=28.76 E-value=1e+02 Score=28.94 Aligned_cols=76 Identities=16% Similarity=0.199 Sum_probs=48.3
Q ss_pred HHHHHHHHcCCcEEEEcccCC-----hhhHHHHHHHHHhcCCCceEEE--EecCHHHHhhHHHHHhh-------cCEEEE
Q psy6272 243 HVVDLIVREAVDIIIMSSVTG-----ANSIREMRGMLEDHVDRVLILA--KIETLLGMEYMDEIIME-------SDGVVL 308 (547)
Q Consensus 243 ~di~~~~~~g~d~I~~sfV~s-----a~di~~~r~~l~~~~~~i~Iia--kIEt~~av~nldeIl~~-------~DgImI 308 (547)
+.++.+.+.|+++|++.-+.. .-++..++++.+.. ++++|| -|-+ .+++.++.+. +||++|
T Consensus 148 e~~~~~~~~G~~~i~~t~~~~~g~~~g~~~~~i~~l~~~~--~iPvia~GGI~~---~~d~~~~~~~~~~~~G~adgv~v 222 (241)
T 1qo2_A 148 SLLKRLKEYGLEEIVHTEIEKDGTLQEHDFSLTKKIAIEA--EVKVLAAGGISS---ENSLKTAQKVHTETNGLLKGVIV 222 (241)
T ss_dssp HHHHHHHTTTCCEEEEEETTHHHHTCCCCHHHHHHHHHHH--TCEEEEESSCCS---HHHHHHHHHHHHHTTTSEEEEEE
T ss_pred HHHHHHHhCCCCEEEEEeecccccCCcCCHHHHHHHHHhc--CCcEEEECCCCC---HHHHHHHHhcccccCCeEeEEEe
Confidence 335678889999998865421 12344554444322 567777 3433 4455556655 899999
Q ss_pred cCCcccccCChHHHH
Q psy6272 309 NRIQLAVATSVEVTF 323 (547)
Q Consensus 309 argDLg~e~~~e~v~ 323 (547)
|++=+...++++++.
T Consensus 223 gsal~~~~~~~~~~~ 237 (241)
T 1qo2_A 223 GRAFLEGILTVEVMK 237 (241)
T ss_dssp CHHHHTTSSCHHHHH
T ss_pred eHHHHcCCCCHHHHH
Confidence 998777777766543
No 495
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=28.75 E-value=4.2e+02 Score=25.86 Aligned_cols=119 Identities=8% Similarity=0.021 Sum_probs=63.2
Q ss_pred hHHHHHHHHHcCCcEEEEcccCChh---------------hHHHHHHHHHhcCCCceEEEEec--------CHHHHhhHH
Q psy6272 241 DKHVVDLIVREAVDIIIMSSVTGAN---------------SIREMRGMLEDHVDRVLILAKIE--------TLLGMEYMD 297 (547)
Q Consensus 241 D~~di~~~~~~g~d~I~~sfV~sa~---------------di~~~r~~l~~~~~~i~IiakIE--------t~~av~nld 297 (547)
...+++.+++.|+|.|.++.--|.. .+.+..+++.+.|..+.+ -+. ++.-.+.+.
T Consensus 82 ~~~~i~~a~~ag~~~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~--~l~~~~~~~~~~~~~~~~~~ 159 (298)
T 2cw6_A 82 NLKGFEAAVAAGAKEVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRG--YVSCALGCPYEGKISPAKVA 159 (298)
T ss_dssp SHHHHHHHHHTTCSEEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEE--EEETTTCBTTTBSCCHHHHH
T ss_pred CHHhHHHHHHCCCCEEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEE--EEEEEeeCCcCCCCCHHHHH
Confidence 3667999999999999987644432 233334455555654432 222 122233444
Q ss_pred HHHhh-----cCEEEEcCCc-ccccCChHHHHHHHHHHHHHHHHc-CCcEEEEcCCCCCCCcccccccCccchhhHHHHH
Q psy6272 298 EIIME-----SDGVVLNRIQ-LAVATSVEVTFLAQKMIAARCNKQ-GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIV 370 (547)
Q Consensus 298 eIl~~-----~DgImIargD-Lg~e~~~e~v~~~qk~ii~~c~~~-gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav 370 (547)
++++. +|.|-++ | .|. +.++++...-+.+.+ .. +.|+.+.++ .++.-. +.....|+
T Consensus 160 ~~~~~~~~~Ga~~i~l~--DT~G~-~~P~~~~~lv~~l~~---~~~~~~i~~H~H----n~~Gla-------~An~laA~ 222 (298)
T 2cw6_A 160 EVTKKFYSMGCYEISLG--DTIGV-GTPGIMKDMLSAVMQ---EVPLAALAVHCH----DTYGQA-------LANTLMAL 222 (298)
T ss_dssp HHHHHHHHTTCSEEEEE--ETTSC-CCHHHHHHHHHHHHH---HSCGGGEEEEEB----CTTSCH-------HHHHHHHH
T ss_pred HHHHHHHHcCCCEEEec--CCCCC-cCHHHHHHHHHHHHH---hCCCCeEEEEEC----CCCchH-------HHHHHHHH
Confidence 44433 4777776 3 232 223444444333332 33 478888765 222111 03344678
Q ss_pred HhCccEEe
Q psy6272 371 QDGADVVV 378 (547)
Q Consensus 371 ~~g~D~vm 378 (547)
..|++.+=
T Consensus 223 ~aGa~~vd 230 (298)
T 2cw6_A 223 QMGVSVVD 230 (298)
T ss_dssp HTTCCEEE
T ss_pred HhCCCEEE
Confidence 89998663
No 496
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=28.75 E-value=1.1e+02 Score=29.00 Aligned_cols=139 Identities=17% Similarity=0.171 Sum_probs=79.7
Q ss_pred ceEEEEecCHHHHhhHHHHHhh-cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCC--CCCcccccc
Q psy6272 281 VLILAKIETLLGMEYMDEIIME-SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILP--DHNVEEYSD 357 (547)
Q Consensus 281 i~IiakIEt~~av~nldeIl~~-~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le--~PtraE~~~ 357 (547)
-.||+-|-+.+. |++.++. ++.||+.-||++ --++++.+++++||++++.-.+.+ .++
T Consensus 10 ~piI~Avr~~~~---l~~al~s~~~~ifll~g~i~----------~l~~~v~~lk~~~K~v~Vh~Dli~Gls~d------ 70 (192)
T 3kts_A 10 QSIIPAAHNQKD---MEKILELDLTYMVMLETHVA----------QLKALVKYAQAGGKKVLLHADLVNGLKND------ 70 (192)
T ss_dssp CCEEEEESSSHH---HHHHTTSSCCEEEECSEETT----------THHHHHHHHHHTTCEEEEEGGGEETCCCS------
T ss_pred CCEEEEecCHHH---HHHHHcCCCCEEEEecCcHH----------HHHHHHHHHHHcCCeEEEecCchhccCCc------
Confidence 468887755544 4555544 689999989885 234588899999999999766655 333
Q ss_pred cCccchhhHHHHHH--hCccEEeeCCcchHHHHHHHHHHHHHHhhhhhhhHHHHHHhhhcCCCCCChhhHHH-HHHHHHH
Q psy6272 358 VSIGDMNDVNSIVQ--DGADVVVLTQSEQAHHRVDILKEILKKTESVLWEKQVFEDLCALACPPLDPAHSIV-IACVNAA 434 (547)
Q Consensus 358 ~~~~~~~Dv~nav~--~g~D~vmLsk~Eta~eaV~~m~~I~~~aE~~~~~~~~f~~~~~~~~~~~~~~~~ia-~aav~~a 434 (547)
.|...++. .++|+++-+|.-. ++.+-+. .++ ..++ -. ..++.+ ..+++..
T Consensus 71 ------~~ai~fL~~~~~pdGIIsTk~~~-----------i~~Ak~~----gL~-tIqR--~F---liDS~al~~~~~~i 123 (192)
T 3kts_A 71 ------DYAIDFLCTEICPDGIISTRGNA-----------IMKAKQH----KML-AIQR--LF---MIDSSAYNKGVALI 123 (192)
T ss_dssp ------HHHHHHHHHTTCCSEEEESCHHH-----------HHHHHHT----TCE-EEEE--EE---CCSHHHHHHHHHHH
T ss_pred ------HHHHHHHHhCCCCCEEEeCcHHH-----------HHHHHHC----CCe-EEEE--EE---EEEcchHHHHHHHH
Confidence 22333343 4799999883321 1111111 000 0000 00 123344 4566666
Q ss_pred HhcCCcEEEEEcCCchHHHHHHhcC--CCCCEEEE
Q psy6272 435 LKCQAVAIIVITCSGYSAKLVSKYR--PQCPILAV 467 (547)
Q Consensus 435 ~~~~a~aIvv~T~sG~tA~~isk~R--P~~pIiav 467 (547)
.+.+.++|=++ .|-....+.+.| ..+||||-
T Consensus 124 ~~~~PD~iEiL--PGi~p~iI~~i~~~~~~PiIaG 156 (192)
T 3kts_A 124 QKVQPDCIELL--PGIIPEQVQKMTQKLHIPVIAG 156 (192)
T ss_dssp HHHCCSEEEEE--CTTCHHHHHHHHHHHCCCEEEE
T ss_pred hhcCCCEEEEC--CchhHHHHHHHHHhcCCCEEEE
Confidence 77788887665 455555554432 45677664
No 497
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=28.73 E-value=98 Score=31.28 Aligned_cols=60 Identities=20% Similarity=0.128 Sum_probs=40.9
Q ss_pred CceEEEEecCHHHHhhHHHHHhh--cCEEEEcCCcccccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCC
Q psy6272 280 RVLILAKIETLLGMEYMDEIIME--SDGVVLNRIQLAVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILP 348 (547)
Q Consensus 280 ~i~IiakIEt~~av~nldeIl~~--~DgImIargDLg~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le 348 (547)
.+.|+ -=|+....+.+.++++. +|+|++-.+-.| | +-.+. +++..|+++|.++.+.+ |+|
T Consensus 239 ~ipIa-~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~G---G---it~~~-~i~~~A~~~g~~~~~~~-~~e 300 (370)
T 1nu5_A 239 GVAIL-ADESLSSLSSAFELARDHAVDAFSLKLCNMG---G---IANTL-KVAAVAEAAGISSYGGT-MLD 300 (370)
T ss_dssp SSEEE-ESTTCCSHHHHHHHHHTTCCSEEEECHHHHT---S---HHHHH-HHHHHHHHHTCEEEECC-SSC
T ss_pred CCCEE-eCCCCCCHHHHHHHHHhCCCCEEEEchhhcC---C---HHHHH-HHHHHHHHcCCcEEecC-Ccc
Confidence 35544 34666666677777766 799999776665 2 23333 48889999999998754 443
No 498
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=28.73 E-value=1.1e+02 Score=29.27 Aligned_cols=101 Identities=11% Similarity=0.056 Sum_probs=56.2
Q ss_pred HHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEecCHHHHhhHHHHHhh----cCEEEEcCCcccccC
Q psy6272 242 KHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKIETLLGMEYMDEIIME----SDGVVLNRIQLAVAT 317 (547)
Q Consensus 242 ~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakIEt~~av~nldeIl~~----~DgImIargDLg~e~ 317 (547)
.++++.+++.|+|||..|. .+.+-++..++ + |. ..+.-+. +..|+.++ +|.|.+=|+. ..
T Consensus 79 ~d~~~~A~~aGAd~v~~p~-~d~~v~~~ar~-~---g~--~~i~Gv~------t~~e~~~A~~~Gad~vk~Fpa~---~~ 142 (224)
T 1vhc_A 79 AEQVVLAKSSGADFVVTPG-LNPKIVKLCQD-L---NF--PITPGVN------NPMAIEIALEMGISAVKFFPAE---AS 142 (224)
T ss_dssp HHHHHHHHHHTCSEEECSS-CCHHHHHHHHH-T---TC--CEECEEC------SHHHHHHHHHTTCCEEEETTTT---TT
T ss_pred HHHHHHHHHCCCCEEEECC-CCHHHHHHHHH-h---CC--CEEeccC------CHHHHHHHHHCCCCEEEEeeCc---cc
Confidence 3678899999999998884 33333444444 2 22 2232244 44454444 6999885421 12
Q ss_pred -ChHHHHHHHHHHHHHHHHc-CCcEEEEcCCCCCCCcccccccCccchhhHHHHHHh-CccEEeeC
Q psy6272 318 -SVEVTFLAQKMIAARCNKQ-GKPFLVVGDILPDHNVEEYSDVSIGDMNDVNSIVQD-GADVVVLT 380 (547)
Q Consensus 318 -~~e~v~~~qk~ii~~c~~~-gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~nav~~-g~D~vmLs 380 (547)
|++.+..+ +... +.|++....+ .| .++..++.. |++++.-|
T Consensus 143 gG~~~lk~l-------~~~~~~ipvvaiGGI--~~-------------~N~~~~l~agga~~v~gS 186 (224)
T 1vhc_A 143 GGVKMIKAL-------LGPYAQLQIMPTGGI--GL-------------HNIRDYLAIPNIVACGGS 186 (224)
T ss_dssp THHHHHHHH-------HTTTTTCEEEEBSSC--CT-------------TTHHHHHTSTTBCCEEEC
T ss_pred cCHHHHHHH-------HhhCCCCeEEEECCc--CH-------------HHHHHHHhcCCCEEEEEc
Confidence 23322222 2223 6888665443 12 445556776 99999855
No 499
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=28.65 E-value=1.5e+02 Score=29.10 Aligned_cols=84 Identities=17% Similarity=0.068 Sum_probs=51.2
Q ss_pred cCEEEEcCCcc--cccCChHHHHHHHHHHHHHHHHcCCcEEEEcCCCCCCCcccccccCccchhhHH-HHHHhCccEEee
Q psy6272 303 SDGVVLNRIQL--AVATSVEVTFLAQKMIAARCNKQGKPFLVVGDILPDHNVEEYSDVSIGDMNDVN-SIVQDGADVVVL 379 (547)
Q Consensus 303 ~DgImIargDL--g~e~~~e~v~~~qk~ii~~c~~~gKPvi~aTq~Le~PtraE~~~~~~~~~~Dv~-nav~~g~D~vmL 379 (547)
+|||++. |=- +..+..++-..+-+.+++.++ -..||+..+. ..+-+|. -+.+ .|-..|+|++|+
T Consensus 35 v~gl~~~-GttGE~~~Ls~~Er~~v~~~~~~~~~-gr~pviaGvg---~~~t~~a--------i~la~~A~~~Gadavlv 101 (292)
T 2vc6_A 35 SFGLVPC-GTTGESPTLSKSEHEQVVEITIKTAN-GRVPVIAGAG---SNSTAEA--------IAFVRHAQNAGADGVLI 101 (292)
T ss_dssp CSEEETT-SGGGTGGGSCHHHHHHHHHHHHHHHT-TSSCBEEECC---CSSHHHH--------HHHHHHHHHTTCSEEEE
T ss_pred CCEEEEC-ccccChhhCCHHHHHHHHHHHHHHhC-CCCcEEEecC---CccHHHH--------HHHHHHHHHcCCCEEEE
Confidence 6999875 322 233444544444454555543 2589998766 4444555 4434 345569999999
Q ss_pred CCcc-----hHHHHHHHHHHHHHHhh
Q psy6272 380 TQSE-----QAHHRVDILKEILKKTE 400 (547)
Q Consensus 380 sk~E-----ta~eaV~~m~~I~~~aE 400 (547)
. .+ |--+.++....|+....
T Consensus 102 ~-~P~y~~~s~~~l~~~f~~ia~a~~ 126 (292)
T 2vc6_A 102 V-SPYYNKPTQEGIYQHFKAIDAAST 126 (292)
T ss_dssp E-CCCSSCCCHHHHHHHHHHHHHHCS
T ss_pred c-CCCCCCCCHHHHHHHHHHHHHhCC
Confidence 7 55 33377788888877664
No 500
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=28.44 E-value=1e+02 Score=30.93 Aligned_cols=68 Identities=16% Similarity=0.143 Sum_probs=49.7
Q ss_pred hhHHHHHHHHHcCCcEEEEcccCChhhHHHHHHHHHhcCCCceEEEEe-c-CHHHHhhHHHHHhh-cCEEEEcCCc
Q psy6272 240 RDKHVVDLIVREAVDIIIMSSVTGANSIREMRGMLEDHVDRVLILAKI-E-TLLGMEYMDEIIME-SDGVVLNRIQ 312 (547)
Q Consensus 240 ~D~~di~~~~~~g~d~I~~sfV~sa~di~~~r~~l~~~~~~i~IiakI-E-t~~av~nldeIl~~-~DgImIargD 312 (547)
+=+++.+...+.|+|.|++.-+.+.++++++.+.+. +++++.+ | .....-+.+|+-+. .+.|++++.=
T Consensus 168 ~ai~ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~-----iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~~~~~ 238 (295)
T 1xg4_A 168 AAIERAQAYVEAGAEMLFPEAITELAMYRQFADAVQ-----VPILANITEFGATPLFTTDELRSAHVAMALYPLSA 238 (295)
T ss_dssp HHHHHHHHHHHTTCSEEEETTCCSHHHHHHHHHHHC-----SCBEEECCSSSSSCCCCHHHHHHTTCSEEEESSHH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCHHHHHHHHHHcC-----CCEEEEecccCCCCCCCHHHHHHcCCCEEEEChHH
Confidence 345566677889999999999998999999988873 5566543 3 12334567787777 6889888653
Done!